BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|254781065|ref|YP_003065478.1| L-lysine 2,3-aminomutase
protein [Candidatus Liberibacter asiaticus str. psy62]
         (352 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|254781065|ref|YP_003065478.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040742|gb|ACT57538.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 352

 Score =  721 bits (1861), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/352 (100%), Positives = 352/352 (100%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF
Sbjct: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS
Sbjct: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF
Sbjct: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ
Sbjct: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK
Sbjct: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS
Sbjct: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352


>gi|315122590|ref|YP_004063079.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495992|gb|ADR52591.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 351

 Score =  598 bits (1543), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 285/351 (81%), Positives = 320/351 (91%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           M    + LTSAQ LY A LI++EQI+ IKEISNHYSIALTP +ANLI+PHNPNDPIARQF
Sbjct: 1   MNSHDQKLTSAQQLYKAKLIEQEQINTIKEISNHYSIALTPFMANLIDPHNPNDPIARQF 60

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IPQKEE+NILPEEREDPIGD+NHSPLKGIVHRYPDR+LLKLLH+CPVYCRFCFRREMVGS
Sbjct: 61  IPQKEEMNILPEEREDPIGDSNHSPLKGIVHRYPDRVLLKLLHICPVYCRFCFRREMVGS 120

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           QKGT+LS +D +AAL+YIQ   +IWEVIFTGGDPLILS  RL+ VLK L  IKHV+ILRF
Sbjct: 121 QKGTILSPQDIDAALSYIQNHPKIWEVIFTGGDPLILSLNRLKTVLKMLMEIKHVKILRF 180

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           HSRVPIVDPQRI+PE IQCLKE+GKP+YIAIHANHP EFS+E+++AIS+LA+AGIILLSQ
Sbjct: 181 HSRVPIVDPQRISPEFIQCLKESGKPIYIAIHANHPREFSQESLSAISKLADAGIILLSQ 240

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKGINDDP+ILA+LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQKIVASLKE 
Sbjct: 241 SVLLKGINDDPKILADLMRIFVESRIKPYYLHHPDLAPGTSHFRLTIEEGQKIVASLKEN 300

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           ISG+CQPFYILD+PGGYGKVKID+HNIKK+ + SY ITDH+NIVH YPP+S
Sbjct: 301 ISGICQPFYILDIPGGYGKVKIDSHNIKKIDDESYLITDHNNIVHHYPPRS 351


>gi|227824114|ref|YP_002828087.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii
           NGR234]
 gi|227343116|gb|ACP27334.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii
           NGR234]
          Length = 350

 Score =  452 bits (1163), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 210/347 (60%), Positives = 266/347 (76%)

Query: 5   HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
           H+ L +A DL  A LI     + I  +++ Y+IA++PV+ANLI+  +P DPI+RQF+P  
Sbjct: 4   HRPLRTAGDLVEAGLIDASAEEAIARVASRYAIAISPVVANLIDRTDPQDPISRQFVPDA 63

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            EL + PEER DPIGD  HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q   
Sbjct: 64  AELTLTPEERADPIGDGAHSPVSGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLG 123

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            L+  + +AA+AYI E  +IWEVI TGGDPL+LS +RLQ++L+ L  I HV+++RFH+RV
Sbjct: 124 TLTPSELDAAIAYISEHPEIWEVILTGGDPLVLSPRRLQEILERLDAIAHVKVVRFHTRV 183

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V+P RI+ +LI  LK +GK  Y+A+HANHP E + EA AA +RL +AGI+++SQSVLL
Sbjct: 184 PVVEPHRIDADLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLL 243

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           KG+NDDPE+LA LMR FVE RIKPYYLHHPDLA GTSHFRLTIE+GQ +VASL+ ++SGL
Sbjct: 244 KGVNDDPEVLAELMRAFVETRIKPYYLHHPDLAPGTSHFRLTIEKGQALVASLRGRVSGL 303

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           CQP YILD+PGG+GK  I    I+  G G Y +TD H   H YPPKS
Sbjct: 304 CQPTYILDIPGGHGKAVISASAIEAEGGGCYTVTDFHGNEHAYPPKS 350


>gi|116254324|ref|YP_770162.1| L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258972|emb|CAK10081.1| putative L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 350

 Score =  446 bits (1146), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 201/344 (58%), Positives = 260/344 (75%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K + S  DL  A L+       ++E++  Y++ALTP I+ LI+  +P+DPIARQF+P   
Sbjct: 5   KPIKSVDDLMKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q    
Sbjct: 65  ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   +AA  YI    +IWEVI TGGDPL+LS +RL ++++ L  I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIHSDEEIWEVILTGGDPLVLSSRRLGEIMEALAGITHVKIIRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP++I+  LI  LK +GK VYIA+HANH  E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYIALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVAALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
           QP YILD+PGG+GK  I    ++  G+G Y +TD+    H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYTVTDYRGGEHSYPP 348


>gi|86359621|ref|YP_471513.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42]
 gi|86283723|gb|ABC92786.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42]
          Length = 349

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 201/344 (58%), Positives = 257/344 (74%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K + S  DL  A L        ++ ++  Y+I LTP I  LI+  +PNDPIARQF+P   
Sbjct: 5   KPIKSVDDLVEAGLATPADRAALEAVTARYAITLTPEITRLIDRADPNDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q    
Sbjct: 65  ELVVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   EAA  YI    +IWEVI TGGDPL+LS +RL++++K L  I HV+I+RFH+RVP
Sbjct: 125 LDAAAMEAAFDYIGSHQEIWEVILTGGDPLVLSPRRLREIMKALANISHVKIVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP++I+  LI  LK +GK VY+A+HANHP E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTMEARAACARLVDAGIVMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GINDDP ILA+LM+ FVE R+KPYYLHHPDLA GT HFRLTIEEGQ+IVA+L+ +ISGLC
Sbjct: 245 GINDDPAILADLMKAFVENRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVAALRGQISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
           QP YILD+PGG+GK  +    ++  G+G Y ++D+    H YPP
Sbjct: 305 QPTYILDIPGGHGKAVVSGSTVQATGDGCYSVSDYRGGEHSYPP 348


>gi|15964028|ref|NP_384381.1| hypothetical protein SMc00355 [Sinorhizobium meliloti 1021]
 gi|307301174|ref|ZP_07580936.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
           BL225C]
 gi|307321075|ref|ZP_07600480.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
           AK83]
 gi|15073204|emb|CAC41712.1| Lysine 2,3-aminomutase [Sinorhizobium meliloti 1021]
 gi|306893247|gb|EFN24028.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
           AK83]
 gi|306903630|gb|EFN34217.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
           BL225C]
          Length = 350

 Score =  442 bits (1138), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 199/346 (57%), Positives = 264/346 (76%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + + +A++L +A L+ +EQ + I  +++ Y++A++P IA L++  +PNDPIARQF+P   
Sbjct: 5   RAIRTARELADAGLVGREQEEAISRVASRYAVAISPTIARLVDRDDPNDPIARQFVPDMA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL ++PEER DPIGD  HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG +    
Sbjct: 65  ELTLMPEERADPIGDGAHSPVAGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+  + +AALAYI  + +IWEVI TGGDPL+LS +RL  ++  L  I HV+++RFH+RVP
Sbjct: 125 LTPAELDAALAYIAGRPEIWEVILTGGDPLVLSPRRLGDIMVRLAEIDHVKVVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V+P R++  LI  LK +GK  Y+A+HANHP E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVEPDRVDAGLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LMR FVE RIKPYYLHHPDLA GT HFRL+IEEGQ +VASL+ ++SGLC
Sbjct: 245 GVNDDPDVLAALMRAFVETRIKPYYLHHPDLAPGTGHFRLSIEEGQALVASLRGRVSGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGG+GK  +    I+  G G Y +TD     HDYPPK 
Sbjct: 305 QPAYILDIPGGHGKAVVSAGAIEAEGGGCYTVTDFRGNRHDYPPKG 350


>gi|209551368|ref|YP_002283285.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209537124|gb|ACI57059.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 350

 Score =  442 bits (1137), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 199/344 (57%), Positives = 259/344 (75%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K L SA DL  A L+       ++E++  Y+IALTP +  LI+  +P+DPIARQF+P   
Sbjct: 5   KPLKSADDLVMAGLVAPADRRALEEVAARYAIALTPDMTRLIDRADPDDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL ILPEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q    
Sbjct: 65  ELTILPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   +AA  YI+   +IWEVI TGGDPL+LS +RL+ +++ L  I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIRGHEEIWEVILTGGDPLVLSPRRLRDIMEALADIAHVKIVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP +++  L+  LK +GK VY+A+HANH  E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPDKVDAALVDALKASGKTVYVALHANHVRELTAEARAACARLIDAGIAMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTIEEGQ+IV+ L+ +ISGLC
Sbjct: 245 GVNDDPDVLAALMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVSQLRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
           QP YILD+PGGYGK  +    ++  G+G Y ++D+    H YPP
Sbjct: 305 QPTYILDIPGGYGKTVVSGSTVQARGDGCYSVSDYRGDEHSYPP 348


>gi|15889814|ref|NP_355495.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58]
 gi|15157746|gb|AAK88280.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58]
          Length = 363

 Score =  441 bits (1134), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 200/349 (57%), Positives = 267/349 (76%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R +T+ + + L  A LI+ E ++ ++ ++  Y++A+TP +  L++ H+P DPIARQF+P 
Sbjct: 12  RFETIKTPEALLEAGLIEAEALEGLRAVTQRYALAITPAVTGLMDSHDPQDPIARQFVPD 71

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
             EL  LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q  
Sbjct: 72  LAELVHLPEERDDPIGDDAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGN 131

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
            ++S ++ +AA AYI+E   IWEVI TGGDPL+LS +RL  ++K LR I HV+I+RFH+R
Sbjct: 132 GMMSPEELDAAFAYIKENPAIWEVILTGGDPLVLSPRRLSDLMKRLRDIPHVKIVRFHTR 191

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+VDP RI+  LI+ LK +GK  Y+A+HANH  E  + A  A +RL +AGI ++SQ+VL
Sbjct: 192 VPVVDPDRIDAPLIEALKASGKTTYVALHANHARELGDAARNACARLIDAGIAMVSQTVL 251

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           LKGINDDP +LA+LMR+FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+  +SG
Sbjct: 252 LKGINDDPAVLADLMRSFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRGHVSG 311

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           LCQP Y+LD+PGG+GK  I  +  +K  +G Y ++D +   H YPP +S
Sbjct: 312 LCQPTYVLDIPGGHGKAMIGRNAAEKTRDGCYSVSDFNGNDHIYPPATS 360


>gi|241206810|ref|YP_002977906.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240860700|gb|ACS58367.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 350

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 199/344 (57%), Positives = 259/344 (75%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K + S  DL  A L+       ++E++  Y++ALTP I+ LI+  +P+DPIARQF+P   
Sbjct: 5   KPIKSVDDLVKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q    
Sbjct: 65  ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +    AA  YI+   +IWEVI TGGDPL+LS +RL ++++ L  I HV+I+RFH+RVP
Sbjct: 125 LDAAAMRAAFDYIRGHEEIWEVILTGGDPLVLSPRRLGEIMEALAGIAHVKIIRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP++I+  LI  LK +GK VY+A+HANH  E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIGALKASGKTVYVALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IV +L+ +ISGLC
Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVEALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
           QP YILD+PGG+GK  I    ++  G+G Y +TD+    H YPP
Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYSVTDYRGGEHSYPP 348


>gi|190893895|ref|YP_001980437.1| L-lysine 2,3-aminomutase [Rhizobium etli CIAT 652]
 gi|190699174|gb|ACE93259.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CIAT 652]
          Length = 350

 Score =  440 bits (1132), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 197/346 (56%), Positives = 259/346 (74%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K + +  DL  A L   +    ++E++  Y+IALTPV+A LI+  +P+DPIARQF+P   
Sbjct: 5   KPIKTVDDLLQARLATPDDRAMLEEVAARYAIALTPVMARLIDRADPDDPIARQFVPDPA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL +   ER DPIGD  HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q    
Sbjct: 65  ELTVATGERADPIGDYAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   +AA  YI +  +IWEVI TGGDPL+LS +RL+ +++ L  I HV+I+RFH+R+P
Sbjct: 125 LDAAAMQAAFDYIADHQEIWEVILTGGDPLVLSPRRLRDIMEALAAIAHVKIVRFHTRIP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP++I+  LI  LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTGEARAACARLVDAGIAMISQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LMR FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMRAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGG+GK  I    I+  G+G Y ++D+    H YPP  
Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYTVSDYRGGEHSYPPAG 350


>gi|218674354|ref|ZP_03524023.1| L-lysine 2,3-aminomutase protein [Rhizobium etli GR56]
          Length = 350

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 197/346 (56%), Positives = 256/346 (73%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K L S  DL  A L        + E++  Y+IALTP +  LI+  +P+DPIARQF+P   
Sbjct: 5   KPLKSVDDLLQAGLATLGDRAMLDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q    
Sbjct: 65  ELTVAPEERADPIGDHTHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   + A  YI    +IWEVI TGGDPL+LS +RL+ +++ L  I HV+I+RFH+R+P
Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRIP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP++I+  LI  LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIDALKASGKTVYVALHANHPSELTSEARAACARLVDAGIAMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGG+GK  I    I+  G+G Y ++D+    H YPP  
Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYSVSDYRGGEHFYPPAG 350


>gi|222087704|ref|YP_002546241.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84]
 gi|221725152|gb|ACM28308.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84]
          Length = 350

 Score =  440 bits (1131), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 200/346 (57%), Positives = 263/346 (76%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + + +  DL  A LI   +   ++ ++  Y+IALTP +A LI+  +P DPIARQF+P   
Sbjct: 5   RPIRTVDDLEQAGLIDSAEALSLEVVAERYAIALTPTVARLIDKADPADPIARQFVPDMA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL + PEER DPI D+ +SP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q    
Sbjct: 65  ELVVTPEERADPISDHAYSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L     +AA AYI++  +IWEVI TGGDPL+LS +RL+++L+ L  I+HV+I+RFH+RVP
Sbjct: 125 LDGAALDAAFAYIRDHEEIWEVILTGGDPLVLSPRRLEEMLRQLADIEHVKIVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP +I+  LI  LK +GK VY+A+HANHP E + EA AA +RL +AGI+L+SQSVLLK
Sbjct: 185 VVDPLKIDGALIAALKASGKTVYVALHANHPRELTAEARAACARLVDAGIVLVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA+LM+ FVE RIKPYYLHHPDLA GTSHFRLTI EGQ IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLASLMKAFVETRIKPYYLHHPDLAPGTSHFRLTIAEGQAIVAALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGG+GK  I    ++++G G Y ++D+    H YPP+ 
Sbjct: 305 QPTYILDIPGGHGKADIGKSAVRELGEGCYSVSDYRGGEHLYPPEG 350


>gi|218461424|ref|ZP_03501515.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Kim 5]
          Length = 350

 Score =  435 bits (1119), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 195/343 (56%), Positives = 256/343 (74%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K L +  DL  A L+       + E++  Y+IALTP +  LI+  +P+DPIARQF+P   
Sbjct: 5   KPLKNVDDLLQAGLVLPGHRAILDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q    
Sbjct: 65  ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   + A  YI    +IWEVI TGGDPL+LS +RL+ +++ L  I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP++I+  LI  LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDLALIAALKASGKTVYVALHANHPRELTSEARAACARLVDAGIAMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           QP YILD+PGG+GK  I    ++  G+G Y ++D+    H YP
Sbjct: 305 QPAYILDIPGGHGKAVISESVVRATGDGCYSVSDYRGGEHSYP 347


>gi|218682609|ref|ZP_03530210.1| lysine 2,3-aminomutase YodO family protein [Rhizobium etli CIAT
           894]
          Length = 350

 Score =  434 bits (1117), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 194/346 (56%), Positives = 257/346 (74%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K + S  DL  A L        ++E++  Y+IALTP +  LI+  +P+DPIARQF+P   
Sbjct: 5   KPIKSVDDLVTAGLAAPADRAALEEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q    
Sbjct: 65  ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   +AA  YI+   +IWEVI TGGDPL+LS +RL+++++ L  I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIRGHQEIWEVILTGGDPLVLSPRRLREIMEALAEIAHVKIVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP +I+   I  LK +GK VY+A+HANH  E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVDPGKIDDASIAALKASGKTVYVALHANHVGELTAEARAACARLVDAGIVMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LM+  VE+R+KPYYLHHPDLA GT+HFRLT+EEGQ IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAGVEIRVKPYYLHHPDLAPGTAHFRLTLEEGQSIVAALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGGYGK  +    ++  G G Y ++D+    H YPP +
Sbjct: 305 QPTYILDIPGGYGKAVVSASAVRARGEGCYSVSDYRGDEHCYPPAN 350


>gi|150398662|ref|YP_001329129.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae
           WSM419]
 gi|150030177|gb|ABR62294.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae
           WSM419]
          Length = 350

 Score =  433 bits (1114), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 195/346 (56%), Positives = 264/346 (76%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +T+ + +DL  A LI +E+ + I  ++  Y++A++P I+ L++  +P+DPIARQF+P   
Sbjct: 5   RTIRTPRDLVEAGLIGREREEAISRVTASYAVAISPAISRLVDRDDPDDPIARQFVPDMA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL ++PEER DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG +    
Sbjct: 65  ELAVMPEERADPIGDSTHSPVTGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+  + + A+AYI    +IWEVI TGGDPL+LS +RL ++++ L  I+HV+++RFH+RVP
Sbjct: 125 LTPAELDRAIAYISGHQEIWEVILTGGDPLVLSPRRLGEIMERLAKIEHVKVVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V+P R++  LI  LK +GK  Y+A+HANHP E +  A AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVEPDRVDAPLIAALKGSGKATYVALHANHPRELTVAARAAAARLIDAGIVMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP+ILA LMR FVE R+KPYYLHHPDLA GTSHFRL+IEEGQ +VASL+ ++SGLC
Sbjct: 245 GVNDDPDILAELMRAFVETRVKPYYLHHPDLAPGTSHFRLSIEEGQALVASLRGRVSGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGG+GK  +   +I+  G G Y +TD     H YPPK 
Sbjct: 305 QPAYILDIPGGHGKSVVSASSIEAEGGGCYTVTDFRGNRHAYPPKG 350


>gi|325293926|ref|YP_004279790.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3]
 gi|325061779|gb|ADY65470.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3]
          Length = 354

 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 196/349 (56%), Positives = 264/349 (75%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R +T+ + + L  A LIK E +++++ ++  Y++A+T  +A+L++  +P DPIARQF+P 
Sbjct: 3   RLETIKTPEALVEAGLIKTEALEDVRAVTQRYALAITSTMADLMDSRDPQDPIARQFVPD 62

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
             EL  LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q  
Sbjct: 63  LVELVHLPEERDDPIGDSAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGN 122

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
            ++S ++ +AA  YI+    IWEVI TGGDPL+LS +RL  ++  L+ + HV+I+RFH+R
Sbjct: 123 GMMSPEELDAAFDYIKANPAIWEVILTGGDPLVLSARRLSDLMTRLKDVPHVKIVRFHTR 182

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+VDP+RI+  LI+ LK +GK  Y+A+HANH  E  + A +A +RL +AGI ++SQ+VL
Sbjct: 183 VPVVDPERIDGPLIESLKASGKTTYVALHANHARELGQAARSACARLIDAGIAMVSQTVL 242

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           LKGINDD  ILA LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+  +SG
Sbjct: 243 LKGINDDSAILAELMRAFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRGHVSG 302

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           LCQP Y+LD+PGG+GK  I  +  +K  +G Y I+D +   H YPP +S
Sbjct: 303 LCQPTYVLDIPGGHGKATIGPNAAEKTRDGCYSISDFNGNDHIYPPPAS 351


>gi|222106966|ref|YP_002547757.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4]
 gi|221738145|gb|ACM39041.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4]
          Length = 349

 Score =  414 bits (1065), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 193/342 (56%), Positives = 252/342 (73%), Gaps = 1/342 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           KT+ + ++L    L+  E   E+  ++  Y+IA+TP +  LI+P++P DPIA QF+PQ  
Sbjct: 6   KTVKTVRELVETGLVAAETGPELDAVAARYAIAITPAMLALIDPNDPTDPIAAQFVPQAG 65

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P ER DPIGD+ HSP++GIVHRYPDR+LLK++H CPVYCRFCFRREMVG     +
Sbjct: 66  ELVHQPVERADPIGDHAHSPVEGIVHRYPDRVLLKVVHSCPVYCRFCFRREMVGPDGDGL 125

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS    +AA+ YI++   IWEVIFTGGDPL+LS +RL+ +L+ L  I HV+I+RFHSRVP
Sbjct: 126 LSGPALDAAITYIRDHKDIWEVIFTGGDPLVLSPRRLRSILQQLGTIDHVRIIRFHSRVP 185

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP RI+ +LI  L+ +GK  YIAIHANHP E + +A AA ++L  AG  LLSQ+VLLK
Sbjct: 186 VADPARIDKDLIDALQASGKTTYIAIHANHPRELTPQARAASAKLLQAGFALLSQTVLLK 245

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDD  +LA+LMR+FV++RI+PYYLHHPDLA GT HFRL+I EGQ IV++L   +SGLC
Sbjct: 246 GVNDDAGVLADLMRSFVDMRIRPYYLHHPDLAPGTGHFRLSIAEGQAIVSALHGHLSGLC 305

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           QP Y+LD+PGG+GK  ID   I K G+  Y +TD H   H Y
Sbjct: 306 QPTYVLDIPGGHGKAPIDASQISKEGD-HYLVTDFHGHHHIY 346


>gi|182680126|ref|YP_001834272.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182636009|gb|ACB96783.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 356

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 188/344 (54%), Positives = 243/344 (70%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L S  DL  A LI  EQ   + E+   ++I LT ++A+LIN ++P DPIARQF+P   E
Sbjct: 12  ALRSTTDLVAAGLIPPEQERALAELEKTHAIGLTTIMADLINRNDPLDPIARQFLPDPRE 71

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
            +  PEE +DPIGD   SP++GIVHRYPDR+LLKLLH+CPVYCRFCFRRE VG      L
Sbjct: 72  ADRRPEELDDPIGDAAFSPVEGIVHRYPDRVLLKLLHICPVYCRFCFRRETVGPGSPMHL 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S +  +AA AYI     IWEVI TGGDPLILS +RL ++L+ L  I HV+ILR H+RVP 
Sbjct: 132 SPEALDAAFAYIASTPSIWEVILTGGDPLILSPRRLAELLERLDAIDHVKILRLHTRVPC 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           VDP+RI P+L+  L+ + K VY+A+HANHP E + +A  A +   +AGI +LSQSVLL+G
Sbjct: 192 VDPERITPDLVALLRGSRKTVYLALHANHPRELTPQARQACAAFIDAGIPMLSQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD  +LA+LMR FVE RIKPYYLHHPDLA GT HFRL+I EGQ ++  L+  +SGLCQ
Sbjct: 252 VNDDASVLADLMRAFVETRIKPYYLHHPDLAPGTGHFRLSIAEGQALMRRLRGHLSGLCQ 311

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           P Y+LDLPGG+GK  +  + +    +    + D+  ++H YPPK
Sbjct: 312 PTYMLDLPGGFGKSPVGPNYLGAENDQGLRVEDYRGMMHAYPPK 355


>gi|170738726|ref|YP_001767381.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp.
           4-46]
 gi|168193000|gb|ACA14947.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp.
           4-46]
          Length = 356

 Score =  396 bits (1018), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 178/349 (51%), Positives = 244/349 (69%), Gaps = 3/349 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           +  +TL     L  A L+ +  +  ++ +++ Y++A+TP +A+LI    P D I RQF+P
Sbjct: 1   MSRRTLRDPASLVEAGLVPRAALPALERVASRYAVAVTPAMADLIE--TPEDGIGRQFLP 58

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
           + EEL+  P ER DPIGD  H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG   
Sbjct: 59  RAEELDAAPGERADPIGDAAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPDG 118

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
              LS    +AALAY+  + +IWEV+ TGGDP +LS +RL+++   L    HV++LR H+
Sbjct: 119 MGALSEAQLDAALAYVAARPEIWEVVVTGGDPFLLSPRRLERIGAALAATDHVRVLRLHT 178

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           RVP V+P+R++  L+  LK  G+ V++A+HANHP EF+  A AAI+RL +AGI L+SQSV
Sbjct: 179 RVPAVEPERVDAALVAALKRFGRAVFVALHANHPGEFTPAARAAIARLVDAGIPLVSQSV 238

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LL+G+NDDPE LA LMR FVE R+KPYYLHH DLA GT HFR ++  GQ ++  L+ ++S
Sbjct: 239 LLRGVNDDPETLAALMRAFVENRVKPYYLHHGDLAPGTGHFRTSLPVGQALMRGLRGRVS 298

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           GLCQP Y+LD+PGG+GKV +    ++    G + +TD     H YPP+ 
Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPAYLEPR-PGGFTVTDPEGRAHAYPPEG 346


>gi|86750071|ref|YP_486567.1| hypothetical protein RPB_2954 [Rhodopseudomonas palustris HaA2]
 gi|86573099|gb|ABD07656.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris HaA2]
          Length = 363

 Score =  394 bits (1012), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 187/349 (53%), Positives = 250/349 (71%), Gaps = 4/349 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L    L   E  D++++++  Y+IA+TP +A LI+P++P+DPIARQ+IP+ +E
Sbjct: 14  TLRQPSELIAQGLAPAESRDDLEQVAARYAIAVTPDVAALIDPNDPHDPIARQYIPRADE 73

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L  LP ER+DPIGD  H+P++GIVHR+ DR+LLKL+HVC VYCRFCFRRE +G  K   L
Sbjct: 74  LVTLPIERDDPIGDGAHAPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRRETIGPGKDNAL 133

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S + T AAL YI+   +IWEVIFTGGDPL+LS +R+ +++  L  I HV+I+RFH+RVP+
Sbjct: 134 SREATAAALDYIRAHPEIWEVIFTGGDPLMLSPRRMAEIMAELATIAHVKIIRFHTRVPV 193

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP RI PEL++ L+  GK  ++A+HANHP E +  A AA + L +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPELVRALQTPGKTTWVALHANHPRELTAAARAACAMLIDAGIPMVSQSVLLRG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD E L  LMR FVE RIKPYYLHH DLA GT+H R TI EGQ ++ +L+ ++SGLCQ
Sbjct: 254 VNDDSETLEALMRGFVECRIKPYYLHHGDLAPGTAHLRTTIAEGQALMRALRGRVSGLCQ 313

Query: 307 PFYILDLPGGYGKVKID----THNIKKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGGYGK  I     T     V +  Y + D+   VH YPP S
Sbjct: 314 PEYVLDIPGGYGKAPIGPNYLTGEDGTVADSRYRVRDYCGDVHLYPPGS 362


>gi|220921877|ref|YP_002497178.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           nodulans ORS 2060]
 gi|219946483|gb|ACL56875.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           nodulans ORS 2060]
          Length = 356

 Score =  392 bits (1006), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 178/348 (51%), Positives = 244/348 (70%), Gaps = 3/348 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           +  +TL     L  A L+   ++ E++ ++  Y++A+TP +A LI    P D I RQF+P
Sbjct: 1   MSRRTLRDPAALAAAGLVPAARLPELERVAARYAVAVTPDMAELIE--APEDGIGRQFLP 58

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
             EEL+  P ER DPIGDN H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG + 
Sbjct: 59  SAEELDTAPGERADPIGDNAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPKG 118

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
              L   + +AALAYI  + +IWEV+ TGGDP +L+ +RL+++   L  ++HV++LR H+
Sbjct: 119 VGSLGEAELDAALAYIAARPEIWEVVVTGGDPFLLAPRRLERIAAALGGMEHVRVLRLHT 178

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           RVP+VDP R++  L+  LK  G+ V++A+HANHP EF+  + AA++RL +AGI L+SQSV
Sbjct: 179 RVPVVDPARVDAALVAALKAFGRAVFVALHANHPREFTPASRAALARLVDAGIPLVSQSV 238

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LL+G+NDD E L  LMR FVE R+KPYYLHH DLA GT HFR  + EGQ ++  L+ ++S
Sbjct: 239 LLRGVNDDAETLGLLMRAFVENRVKPYYLHHGDLAPGTGHFRTGLAEGQALMRILRGRVS 298

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           GLCQP Y+LD+PGG+GKV +    +   G G + +TD     H YPP+
Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPGYLAPRGAG-WTVTDPDGREHAYPPE 345


>gi|217976642|ref|YP_002360789.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris
           BL2]
 gi|217502018|gb|ACK49427.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris
           BL2]
          Length = 363

 Score =  391 bits (1004), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 192/350 (54%), Positives = 250/350 (71%), Gaps = 1/350 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
            LR KTL SA DL  A L    +  EI+ +   Y IA+TP IA LI+   PNDPIARQF+
Sbjct: 12  SLRAKTLRSADDLVEAGLASARRRAEIESVGETYPIAVTPAIAALIDRDAPNDPIARQFV 71

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   EL+  PE+  DPIGD  +SP++G+VHRYPDR+LLKLL VCPVYCRFCFRR+MVG  
Sbjct: 72  PDIAELSPRPEDLADPIGDEAYSPVEGVVHRYPDRVLLKLLLVCPVYCRFCFRRDMVGPG 131

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           K   LS +  +AALAYI    +IWEVI TGGDP  LS +RL ++++ L  I+HV+I+R H
Sbjct: 132 KSAHLSPEALDAALAYIAADPRIWEVILTGGDPFALSPRRLAEIMERLAAIEHVRIVRVH 191

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +RVP VDP  I+  LI  LK++GK +Y+A+HANHP E + EA AA +RL +AGI ++SQS
Sbjct: 192 TRVPCVDPDAIDAALIAALKKSGKTIYVALHANHPRELTSEARAACARLIDAGIPMVSQS 251

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL G+NDD E L+ LMR FVE R+KPYYLHH DLA G +HFR+ IE+G++++  L+ ++
Sbjct: 252 VLLAGVNDDVETLSALMRGFVEARVKPYYLHHLDLAPGVAHFRVDIEKGRELMQQLRGRL 311

Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVG-NGSYCITDHHNIVHDYPPK 350
           SGLCQP Y+LD+PGG+GK  I    I+  G NG + + D+    H YPP+
Sbjct: 312 SGLCQPAYMLDVPGGHGKSPIGPDFIEPAGANGVFRVRDYQGATHLYPPQ 361


>gi|39935581|ref|NP_947857.1| hypothetical protein RPA2515 [Rhodopseudomonas palustris CGA009]
 gi|39649434|emb|CAE27956.1| putative L-lysine 2,3-aminomutase [Rhodopseudomonas palustris
           CGA009]
          Length = 363

 Score =  388 bits (996), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 181/349 (51%), Positives = 245/349 (70%), Gaps = 4/349 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L    L   +    + E++  Y+IA+TP +A LI+  +P+DPIARQ+IP  EE
Sbjct: 14  TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPSAEE 73

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+ L  ER+DPIGD  H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG  K   L
Sbjct: 74  LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S + T AAL YI+   +IWEVIFTGGDPL+LS +RL +++  L  I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLAEIMAELAAIEHVKIVRFHTRLPV 193

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP RI P+L++ L+  GK  ++A+HANHP E + +A AA +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTGDARAACARIVDAGIPMVSQSVLLRG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+  +SGLCQ
Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313

Query: 307 PFYILDLPGGYGKVKIDTHNIKKV-GNG---SYCITDHHNIVHDYPPKS 351
           P Y+LD+PGGYGK  +  + +    G G    Y + D+   VH YPP S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGRDSRYRVADYCGEVHLYPPLS 362


>gi|299133809|ref|ZP_07027003.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2]
 gi|298591645|gb|EFI51846.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2]
          Length = 357

 Score =  386 bits (992), Expect = e-105,   Method: Compositional matrix adjust.
 Identities = 179/347 (51%), Positives = 243/347 (70%), Gaps = 4/347 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L +  L+ +E +  ++ ++  Y+IA+TP +A LI+P++PNDPIARQ++P  +E
Sbjct: 10  TLRRPAELADQKLVSREALPALEAVAARYAIAITPAVAALIDPNDPNDPIARQYVPSTQE 69

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L I P ER DPIGDN  SP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K + L
Sbjct: 70  LQIEPVERVDPIGDNARSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKDSAL 129

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S      A+ YI+   +IWEVI TGGDPL+LS +RL++++  L  I HV+I+RFH+RVP+
Sbjct: 130 SDHAYAKAIDYIRTHPEIWEVILTGGDPLMLSTRRLKEIVNDLAAIPHVKIIRFHTRVPV 189

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP R+  E+ + L       ++A+HANHP E + EA AA +RL + GI ++SQSVLL+G
Sbjct: 190 ADPARMTDEVAEALHHPDVTTWVALHANHPRELTAEARAACARLIDRGIPMVSQSVLLRG 249

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  E L  LMR FVE RIKPYYLHH DLA GTSH R T+EEG+ ++  L+  +SGLCQ
Sbjct: 250 VNDTAETLTALMRAFVECRIKPYYLHHGDLAPGTSHLRTTLEEGEALMRQLRGHVSGLCQ 309

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYC----ITDHHNIVHDYPP 349
           P Y+LD+PGGYGK+ +    + +  +G       + D+   VH YPP
Sbjct: 310 PDYVLDIPGGYGKIPVGPAYLSQQRDGERMQPRRLVDYCGGVHSYPP 356


>gi|192291173|ref|YP_001991778.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
           palustris TIE-1]
 gi|192284922|gb|ACF01303.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
           palustris TIE-1]
          Length = 363

 Score =  383 bits (983), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 182/349 (52%), Positives = 248/349 (71%), Gaps = 4/349 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L    L   +    + E++  Y+IA+TP +A LI+  +P+DPIARQ+IP+ EE
Sbjct: 14  TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPRAEE 73

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+ L  ER+DPIGD  H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG  K   L
Sbjct: 74  LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S + T AAL YI+   +IWEVIFTGGDPL+LS +RL +++  L  I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP RI P+L++ L+  GK  ++A+HANHP E +E A AA +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTEAARAACARIIDAGIPMVSQSVLLRG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+  +SGLCQ
Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313

Query: 307 PFYILDLPGGYGKVKIDTHNIKKV-GNGS---YCITDHHNIVHDYPPKS 351
           P Y+LD+PGGYGK  +  + +    G G+   Y + D+   VH YPP+S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGADSRYRVADYCGEVHLYPPQS 362


>gi|163852420|ref|YP_001640463.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           extorquens PA1]
 gi|163664025|gb|ABY31392.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           extorquens PA1]
          Length = 353

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 175/345 (50%), Positives = 234/345 (67%), Gaps = 1/345 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L SA  L  A L+    +  ++ ++  Y++++T  +A LI+  +P+DPIARQFIP+ EE
Sbjct: 4   ALKSATALARAGLVDAAALPTLERVAARYAVSVTADMAELIDASDPDDPIARQFIPRAEE 63

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +   PEER DPIGD+ H  + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG      L
Sbjct: 64  IETRPEERADPIGDDAHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +   A  YI    +IWEV+ TGGDP  LS +RL  + + L  I HV++LRFH+RVP+
Sbjct: 124 SEAELAVAYRYIAAHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V+P R++  L+  LK     V++A+HANHP EF+  A  AI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARGAIARLVDAGIPMVSQSVLLRG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD E L  LMR FVE RIKPYYLHH DLA GT H R  + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGG+GKV +    +   G  S+ +TD    VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAAGE-SWRVTDPSGAVHAYPPES 347


>gi|300022957|ref|YP_003755568.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299524778|gb|ADJ23247.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 356

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 172/325 (52%), Positives = 230/325 (70%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           M    + LTS  DL  A L      D +  +   Y+I++TP +A+LI+P++P DPIARQF
Sbjct: 1   MTRTPRKLTSVDDLIAAELAPASARDALNNVGARYAISVTPAVADLIDPNDPADPIARQF 60

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL     ER DPIGD   SP  G+VHRYPDR+LLK+  VCPVYCRFCFRREMVG 
Sbjct: 61  VPDARELETHAAERADPIGDRIKSPAPGVVHRYPDRVLLKIASVCPVYCRFCFRREMVGP 120

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             G  LS+ D  AA+AYI+    +WEVI TGGDPL+LS +R+++V + L  I HV+ILR+
Sbjct: 121 ANGETLSADDLAAAVAYIRATPAVWEVILTGGDPLVLSPRRIREVTEMLSAIPHVKILRW 180

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           H+RVP+VDP R+  ELI  LK   K V++ +H NH  E +  A  A+++L +AGI L+SQ
Sbjct: 181 HTRVPVVDPDRVTDELIAALKATHKTVFVGLHTNHARELTGSARTAVAKLVDAGIPLVSQ 240

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+NDD + L +LMRT VELR+KPYYLHH DLA GT+HFR TI +GQ ++  L+++
Sbjct: 241 TVLLKGVNDDADTLEDLMRTLVELRVKPYYLHHGDLAPGTAHFRTTIAKGQAVMRELRKR 300

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
           +SGL  P Y+LDLPG +GKV ++++
Sbjct: 301 LSGLALPTYVLDLPGAHGKVPLESY 325


>gi|240139757|ref|YP_002964234.1| putative aminomutase, putative kamA and yjeK-like protein
           [Methylobacterium extorquens AM1]
 gi|240009731|gb|ACS40957.1| putative aminomutase, putative kamA and yjeK-like protein
           [Methylobacterium extorquens AM1]
          Length = 353

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 176/345 (51%), Positives = 236/345 (68%), Gaps = 1/345 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L SA  L  A L+    +  ++ ++  Y++++T  +A LI+ ++P+DPIARQFIP+ EE
Sbjct: 4   ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +   PEER DPIGD+ H  + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG      L
Sbjct: 64  IETRPEERADPIGDDTHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +  AA  YI    +IWEV+ TGGDP  LS +RL  +   L  I HV++LRFH+RVP+
Sbjct: 124 SEVELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITDALGAIPHVRVLRFHTRVPV 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V+P R++  L+  LK     V++A+HANHP EF+  A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD E L  LMR FVE RIKPYYLHH DLA GT H R  + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGG+GKV +    +    + S+ +TD    VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYL-DAADESWRVTDPSGAVHAYPPES 347


>gi|170749147|ref|YP_001755407.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655669|gb|ACB24724.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 347

 Score =  379 bits (973), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 177/347 (51%), Positives = 241/347 (69%), Gaps = 1/347 (0%)

Query: 5   HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
           ++ L SA DL +A LI   + D +  +   Y++++TP +A LI+P +P+DPI RQF+P+ 
Sbjct: 2   NRALRSADDLLSAGLISGAEADALGAVLARYAVSVTPDMAELIDPQDPDDPIGRQFVPRV 61

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            E    PEER DPIGD  H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRREMVG     
Sbjct: 62  AEAVATPEERADPIGDAAHAPVTGIVHRYPDRVLLKPLHVCPVYCRFCFRREMVGPDGLG 121

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            L+  + +AALAYI +  +IWEV+ TGGDP  LS +RL  + + L  I HV+++R H+RV
Sbjct: 122 TLTDAELDAALAYIAQDPRIWEVVLTGGDPFALSPRRLGVIAERLAAIAHVRVMRVHTRV 181

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V P  ++  L++ LK  G+ V++A+HANHP EF+  A AA +RL +AGI L+ QSVLL
Sbjct: 182 PVVKPDLVSDALVRALKRFGRAVFVAVHANHPREFTAAASAACARLVDAGIPLVGQSVLL 241

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           +G+ND+   L  LMRT VE RIKPYYLHH DLA GT+H R  + EGQ ++ +L+ ++SGL
Sbjct: 242 RGVNDEAATLEALMRTLVENRIKPYYLHHGDLAPGTAHLRTDVAEGQALMRALRGRLSGL 301

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
            QP Y+LD+PGG+GKV I    ++   +G   +TD     H YPPK+
Sbjct: 302 AQPTYVLDIPGGHGKVPIGPGYLRDTPDGVR-VTDPGGQDHAYPPKA 347


>gi|218531178|ref|YP_002421994.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218523481|gb|ACK84066.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 353

 Score =  377 bits (968), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/345 (50%), Positives = 236/345 (68%), Gaps = 1/345 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L SA  L  A L+    +  ++ ++  Y++++T  +A LI+ ++P+DPIARQFIP+ EE
Sbjct: 4   ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +   PEER DPIGD+ H  + GIVHRY DR+LLK LH+CPVYCRFCFRRE VG      L
Sbjct: 64  IETRPEERADPIGDDAHEAVPGIVHRYADRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +  AA  YI    +IWEV+ TGGDP  LS +RL  + + L  I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V+P R++  L+  LK     V++A+HANHP EF+  A AAI++L +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVDALKGFSGAVFVALHANHPREFTPAARAAIAQLVDAGIPMVSQSVLLRG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD E L  LMR FVE RIKPYYLHH DLA GT H R  + +GQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPQGQALMRTLRGRLSGLAQ 303

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGG+GKV +    +   G  S+ +TD    VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPSYLDAAGE-SWRVTDPSGAVHAYPPES 347


>gi|188582434|ref|YP_001925879.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi
           BJ001]
 gi|179345932|gb|ACB81344.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi
           BJ001]
          Length = 353

 Score =  377 bits (967), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 173/345 (50%), Positives = 241/345 (69%), Gaps = 1/345 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L S   L  A L+  E +  ++ ++  Y++++T  +A LI+  +P+DPIARQF+P+ EE
Sbjct: 4   ALKSTTALARAGLLPAEALPALERVAARYAVSVTADMAELIDRDDPHDPIARQFVPRAEE 63

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +    EER DPIGD+ H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG      L
Sbjct: 64  IETRVEERADPIGDDAHAPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPAGHGSL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +  AA  YI +  +IWEV+ TGGDP  LS +RL ++  TL  I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAFRYIADHPEIWEVVVTGGDPFALSPRRLGEIATTLGAIPHVRVLRFHTRVPV 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V+P R++ +++  LK+    V++A+HANHP EF+  A AAI+RL +AG+ ++SQSVLL+G
Sbjct: 184 VEPARVDADVVAALKKFPGAVFVALHANHPREFTPAARAAIARLVDAGLPMVSQSVLLRG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMR FVE RIKPYYLHH DLA GT H R  + EGQ ++  L+ ++SGL Q
Sbjct: 244 VNDDAATLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRHLRGRLSGLAQ 303

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGG+GKV +    +++  +G++ +TD    VH YPP +
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLEE-SDGAWQVTDPSGAVHPYPPGT 347


>gi|254562169|ref|YP_003069264.1| aminomutase [Methylobacterium extorquens DM4]
 gi|254269447|emb|CAX25413.1| putative aminomutase, putative homologue kamA and yjeK
           [Methylobacterium extorquens DM4]
          Length = 353

 Score =  376 bits (966), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 174/345 (50%), Positives = 235/345 (68%), Gaps = 1/345 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L SA  L  A L+  + +  ++ ++  Y++++T  +A LI+  +P DPIARQFIP+ EE
Sbjct: 4   ALKSATALARAGLVDAQALPALERVAARYAVSVTADMAELIDASDPADPIARQFIPRAEE 63

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +   PEER DPIGD+ H  + G+VHRYPDR+LLK LH+CPVYCRFCFRRE VG      L
Sbjct: 64  IETRPEERADPIGDDAHEAVSGVVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +  AA  YI    +IWEV+ TGGDP  LS +RL  + + L  I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V+P R++  L+  LK     V++A+HANHP EF+  A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  E L  LMR FVE RIKPYYLHH DLA GT H R  + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDVAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGG+GKV +    +    + S+ +TD    VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYL-DAADESWRVTDPSGAVHAYPPES 347


>gi|209885154|ref|YP_002289011.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans
           OM5]
 gi|209873350|gb|ACI93146.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans
           OM5]
          Length = 357

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 177/347 (51%), Positives = 240/347 (69%), Gaps = 3/347 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L   NL+ ++ +  ++ ++  Y+IA+TP +A LI+P++PNDPIARQ++P  +E
Sbjct: 11  TLRQPAELAAHNLVSQDALQGLEAVAKRYAIAITPAVAELIDPNDPNDPIARQYVPSPQE 70

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     ER DPIGD  HSP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K T L
Sbjct: 71  LQSETIERVDPIGDRAHSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKETAL 130

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S      A+ YI+   +IWEVI TGGDPL+LS +RL+++   L  I HV+I+RFH+RVPI
Sbjct: 131 SDAAYTKAIDYIRTHPEIWEVILTGGDPLMLSARRLKEITADLAAIPHVRIVRFHTRVPI 190

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP+R+  E+   L+      ++A+HANHP E +  A AA +RL + GI L+SQSVLL+G
Sbjct: 191 ADPERVTDEVADALRHPDVTTWVAVHANHPRELTPTARAACARLIDRGIPLVSQSVLLRG 250

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  E L  LMR FVE RIKPYYLHH DLA GT+H R ++EEG+ ++  L+  +SGLCQ
Sbjct: 251 VNDTVETLTALMRAFVECRIKPYYLHHGDLAPGTAHLRTSLEEGEALMRKLRGYVSGLCQ 310

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYC---ITDHHNIVHDYPPK 350
           P Y+LD+PGG+GK+ +    +   G G      + D+   VH YPP+
Sbjct: 311 PDYVLDIPGGFGKIPVGPVYLSPEGAGPTQRRRLLDYCGEVHVYPPE 357


>gi|316934333|ref|YP_004109315.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602047|gb|ADU44582.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
           palustris DX-1]
          Length = 363

 Score =  374 bits (961), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 180/350 (51%), Positives = 246/350 (70%), Gaps = 4/350 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL   ++L        +    + E++  Y+IA+TP +A LI+  +P+DPIARQ+IP+ EE
Sbjct: 14  TLRHPEELIAEGFAAADGRATLTEVAARYAIAVTPAVAALIDRDDPDDPIARQYIPRAEE 73

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+ L  ER+DPIGD  H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG  K   L
Sbjct: 74  LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S + T AAL YI+   +IWEVIFTGGDPL+LS +RL +++  L  I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP RI P+L+Q L+   K  ++A+HANHP EF+  A  A +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPTRITPDLVQALRTPSKTTWLALHANHPREFTAAARVACARIIDAGIPMVSQSVLLRG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDDP+ L  LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+  +SGLCQ
Sbjct: 254 VNDDPDTLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKSS 352
           P Y+LD+PGGYGK  +  + +        N  Y + D+   VH YPP+S 
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLLDADGTDPNSRYRVADYCGEVHLYPPRSG 363


>gi|209965785|ref|YP_002298700.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW]
 gi|209959251|gb|ACI99887.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW]
          Length = 353

 Score =  374 bits (961), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 175/343 (51%), Positives = 236/343 (68%), Gaps = 2/343 (0%)

Query: 6   KTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
           +TL S   L +A L+  + ++  ++ ++  +++A+TP +A L++P +P DP+ARQF+P  
Sbjct: 10  RTLRSPGALADAGLLPDDGRLPALEAVARRFAVAVTPAVAELVDPTDPADPVARQFLPDP 69

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            EL   PEE  DPIGD   SP+KGIVHRY DR+LLK +H CPVYCRFCFRREMVG    T
Sbjct: 70  AELETRPEELADPIGDAPFSPVKGIVHRYRDRVLLKPVHTCPVYCRFCFRREMVGPGAET 129

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            L   D +AAL YI  + +IWEVI TGGDPLILS +RL +++  L  I HV I+R HSRV
Sbjct: 130 -LDGADLDAALDYIAARPEIWEVILTGGDPLILSPRRLAEIVARLDAIPHVGIVRLHSRV 188

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+VDP+R+  EL+  L+      ++ +HANH  E +EEA AAI+RL +AGI +LSQSVLL
Sbjct: 189 PVVDPERVTAELVAALRGRRLTTWVMLHANHWKELTEEARAAIARLVDAGIPMLSQSVLL 248

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           KG+NDD E LA   R  V  R+KP+YLH  DLA GT+HFR T+ EGQ ++ +L+  +SGL
Sbjct: 249 KGVNDDVETLARTFRALVAARVKPHYLHQGDLAKGTAHFRTTVAEGQALMRALRGDVSGL 308

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           CQP Y+LD+PGG+GKV +   + +  G G + +TD     H Y
Sbjct: 309 CQPTYVLDIPGGHGKVPLTPTHAEPDGAGGWTVTDPRGGRHPY 351


>gi|167644729|ref|YP_001682392.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31]
 gi|167347159|gb|ABZ69894.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31]
          Length = 347

 Score =  374 bits (959), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 180/347 (51%), Positives = 244/347 (70%), Gaps = 4/347 (1%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L  + L SAQ L  A L+  E++  I+ ++  Y++A+TP +A LI+P N +DPIARQFIP
Sbjct: 2   LPARPLRSAQALAEAGLVAAERLPAIEAVAARYAVAITPDMAALIDPANESDPIARQFIP 61

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
            + EL+  P E  DPIGD  HSP++GIVHRYPDR+LLK  H C VYCRFCFRREMVG + 
Sbjct: 62  SEAELSENPGEIPDPIGDEAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEG 121

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
              L+ +  +AA AYI   S+IWEVI TGGDPL+LS +RL+ + + L  I+HV+++RFH+
Sbjct: 122 LANLTPEKLDAAFAYIAAHSEIWEVIITGGDPLVLSPRRLRDIGERLAGIEHVKVVRFHT 181

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+VDP  I  E++  LK +GK VY+A+HANH  E +E A AA +R+ +AG+ +LSQ+V
Sbjct: 182 RIPVVDPGAITGEMVDALKASGKTVYVALHANHARELTEAARAACARIIDAGVPMLSQTV 241

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKGINDDPE L  LMR FVE RI+PYYLHH D A GT H R ++E+G+ ++ +++ + S
Sbjct: 242 LLKGINDDPETLGTLMRAFVESRIRPYYLHHGDHAPGTGHLRTSVEDGRALMRAIRGRFS 301

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
           GLCQP Y+LD+P G+GKV I    +   G     + D +   H YPP
Sbjct: 302 GLCQPTYVLDIPDGHGKVPIGPDYLAVEGE----VEDPNGGAHAYPP 344


>gi|296448496|ref|ZP_06890376.1| lysine 2,3-aminomutase YodO family protein [Methylosinus
           trichosporium OB3b]
 gi|296253995|gb|EFH01142.1| lysine 2,3-aminomutase YodO family protein [Methylosinus
           trichosporium OB3b]
          Length = 376

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 172/346 (49%), Positives = 229/346 (66%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL S  DL  A L+  E    ++ +   YS+A+T   A L++  +P DPIARQF+P   E
Sbjct: 22  TLKSVADLVAAGLVAPEAAPALRAVEARYSVAVTAETAALLDRADPRDPIARQFLPDARE 81

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+ LPEE  DPIGD+  SP++G+VHRY DR+LLKLL VCP+YCRFCFRRE VG  KG  L
Sbjct: 82  LDTLPEELADPIGDDAFSPVEGLVHRYSDRVLLKLLSVCPIYCRFCFRRESVGLGKGGSL 141

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S      AL YI E+ +I+EVI TGGDPL LS +RL  + + LR I HV +LR H+R P 
Sbjct: 142 SETALTRALDYIAERPRIFEVILTGGDPLALSARRLGLLAERLREIAHVAVLRIHTRAPT 201

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P  + PE +  L  +GK VY+A+H NH  E +  A  AI+R+  AG+  L+Q+VLL+G
Sbjct: 202 VSPDLVTPERLAALTASGKAVYMALHVNHARELTPRAREAIARIQAAGVATLAQTVLLRG 261

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD + L  LMR    LR+KPYYLHHPDLA GT+HFRL+IEEG+ +   L  +ISG+  
Sbjct: 262 VNDDADTLETLMRALTALRVKPYYLHHPDLAPGTAHFRLSIEEGRALHGELARRISGIAL 321

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P Y+LD+PGGYGKV + + +I++   G + + D     H YP + +
Sbjct: 322 PAYVLDIPGGYGKVPLQSPHIERNPAGDWLVRDRAGRAHAYPGEGA 367


>gi|295691014|ref|YP_003594707.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC
           21756]
 gi|295432917|gb|ADG12089.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC
           21756]
          Length = 346

 Score =  372 bits (955), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 178/346 (51%), Positives = 238/346 (68%), Gaps = 5/346 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           KTL   + L  A LI  E++  ++ ++  Y++A+TP +A LI+  +PNDPIARQF+P  E
Sbjct: 5   KTLRDVRSLAEAGLIPSERLAALEAVAARYAVAVTPAMAELIDTADPNDPIARQFVPAPE 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P E  DPIGD+ HSP+ GI+HRYPDR+LLK  H C VYCRFCFRREMVG +  + 
Sbjct: 65  ELVASPGEDGDPIGDSIHSPVDGIIHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+    +AA AYI  + QIWEVI TGGDP +LS +RL  ++  L  I+HV+++RFH+RVP
Sbjct: 125 LTPAQLDAAFAYIAARPQIWEVIVTGGDPFVLSSRRLAALIDRLEAIEHVKVVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
            VDP  +  +L+  LK + K VY+A+HANH  E +  A AA + L +AGI ++SQ+VLLK
Sbjct: 185 AVDPALVTDDLVAALKRSTKAVYVALHANHARELTPAARAACAHLVDAGIAMVSQTVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDPE L+ LMR FVE RIKPYYLHH DLA GT+H R TIE+GQ I+ +L+  +SGL 
Sbjct: 245 GVNDDPETLSALMRAFVETRIKPYYLHHGDLAPGTAHLRTTIEDGQAIMRALRGTLSGLA 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP Y+LD+PGG+GK  +    +   G     + D +   H YPP +
Sbjct: 305 QPTYVLDIPGGHGKAPVGPSYLSAGG-----VEDPNGRRHAYPPAA 345


>gi|154247831|ref|YP_001418789.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter
           autotrophicus Py2]
 gi|154161916|gb|ABS69132.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter
           autotrophicus Py2]
          Length = 362

 Score =  372 bits (954), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 172/344 (50%), Positives = 233/344 (67%), Gaps = 1/344 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL S  DL  A L      D +  ++  Y++A+TP + + I+  +P DPIARQF+P   E
Sbjct: 19  TLRSGDDLVAAGLADARDRDALARVAERYAVAVTPTLVDAIDRTDPADPIARQFVPHPAE 78

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L + PEE  DPIGD  HSP+ GIVHRY DR LLK++ VC VYCRFCFRREMVG      L
Sbjct: 79  LEVRPEELADPIGDEAHSPVPGIVHRYRDRALLKIVGVCAVYCRFCFRREMVGPGAAATL 138

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S +  E A AY+    +IWEVI TGGDP +LS +R+ +V+  L  I HV+I+RFH+RVPI
Sbjct: 139 SPEALERAFAYLSAHPEIWEVILTGGDPFMLSPRRMGEVMARLAAIAHVKIVRFHTRVPI 198

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
             P+R++  LI  LK  G   Y+A+H NH  E + +A +A++R+A+AGI LLSQSVLL+G
Sbjct: 199 AAPERVSDALIAALKAPGLTSYVAVHVNHARELTPDARSALARMADAGIPLLSQSVLLRG 258

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LA L R+ VE R+KPYYLHHPDLA GT+HFRL I  GQ+++ +L+ ++SG+  
Sbjct: 259 VNDEADTLAALFRSLVECRVKPYYLHHPDLAPGTAHFRLDIARGQELMRALRGRLSGIAL 318

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           P Y+LD+PGG GKV +   +I   G     ++D+   VH YPP+
Sbjct: 319 PTYVLDIPGGAGKVPLTPGHIAPAGT-RLAVSDNCGGVHLYPPE 361


>gi|85717361|ref|ZP_01048313.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A]
 gi|85695836|gb|EAQ33742.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A]
          Length = 365

 Score =  371 bits (952), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/356 (51%), Positives = 245/356 (68%), Gaps = 10/356 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
            T+   +DL    L     + ++++++  Y+IA+TP +A LI+P +P+DPIARQ++P   
Sbjct: 10  STVRHPEDLIAHGLAPAAALADLEKVAARYAIAITPEVAGLIDPTDPDDPIARQYLPSAN 69

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P ER DPIGD+ HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K T 
Sbjct: 70  ELAAQPGERADPIGDHAHSPVDGIVHRYPDRVLLKLIHVCAVYCRFCFRREMVGPAKETA 129

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS   T AAL YI+   ++WEVI TGGDPL+LS +RL +++  L  I HV+I+R H+RVP
Sbjct: 130 LSKSATTAALDYIRAHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVP 189

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + D  R+  E++  L+  G   ++A+HANHP E +  A AA +R+ +AGI ++SQSVLL+
Sbjct: 190 VADSARVTDEMVAGLRTEGAATWLALHANHPRELTAAARAACARIVDAGIPMVSQSVLLR 249

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDD   L  LMR FVE RIKPYYLHH DLA GT+H R T+EEGQ ++ +L+ ++SGLC
Sbjct: 250 GVNDDAATLETLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEEGQLLMRALRGRVSGLC 309

Query: 306 QPFYILDLPGGYGKVKI--DTHNIKKVGNGS--------YCITDHHNIVHDYPPKS 351
           QP Y+LD+PGGYGKV +  D  ++  +            Y ITD+   VH YPP S
Sbjct: 310 QPDYVLDIPGGYGKVPVGPDYMSLSDLTYRGGEHRPELRYHITDYCGGVHLYPPVS 365


>gi|75675833|ref|YP_318254.1| hypothetical protein Nwi_1641 [Nitrobacter winogradskyi Nb-255]
 gi|74420703|gb|ABA04902.1| L-lysine 2,3-aminomutase [Nitrobacter winogradskyi Nb-255]
          Length = 366

 Score =  370 bits (951), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/355 (50%), Positives = 242/355 (68%), Gaps = 10/355 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
            TL   +DL    L     + ++++++  Y+IA+TP +ANLI+P +P+DPIARQ++P  +
Sbjct: 11  STLRRPEDLIAHGLAPAAALADLEKVAARYAIAITPEVANLIDPADPDDPIARQYLPSAD 70

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL     ER DPIGD+  SP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K T 
Sbjct: 71  ELAAQAYERADPIGDHARSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETA 130

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS   T AAL YI+   ++WEVI TGGDPL+LS +RL +++  L  I HV+I+R H+RVP
Sbjct: 131 LSKSATAAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVP 190

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP R+  E+   L+  G   ++A+HANHP E +  A AA +R+ +AGI ++SQSVLL+
Sbjct: 191 VADPARVTDEMAAALRTDGATTWLALHANHPRELTAAARAACARIIDAGIPMVSQSVLLR 250

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDD   L  LMR FV+ RIKPYYLHH DLA GT+H R T+E+GQ ++  L+ ++SGLC
Sbjct: 251 GVNDDAATLEALMRAFVQCRIKPYYLHHGDLAPGTAHLRTTLEQGQALMRELRGRVSGLC 310

Query: 306 QPFYILDLPGGYGKVKIDTHNIKK----VGNGS------YCITDHHNIVHDYPPK 350
           QP Y+LD+PGGYGK  +    +       G G       Y ITD+   VH YPPK
Sbjct: 311 QPDYVLDIPGGYGKSPVGPGYMSPSDLISGAGEHRPELHYLITDYCGGVHLYPPK 365


>gi|92117823|ref|YP_577552.1| hypothetical protein Nham_2300 [Nitrobacter hamburgensis X14]
 gi|91800717|gb|ABE63092.1| L-lysine 2,3-aminomutase [Nitrobacter hamburgensis X14]
          Length = 366

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/355 (51%), Positives = 244/355 (68%), Gaps = 10/355 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
            TL   +DL    L     + ++  ++  Y+IA+TP +A+LI+P +P+DPIARQ++P  +
Sbjct: 11  STLRQPEDLIAHGLAPAAALPDLARVAARYAIAVTPEVASLIDPDDPDDPIARQYLPSVD 70

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P ER DPIGD  HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K T 
Sbjct: 71  ELAAQPGERADPIGDRAHSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETA 130

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS     AAL YI+   ++WEVI TGGDPL+LS +RL +++  L  I HV+I+R HSRVP
Sbjct: 131 LSKSAATAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAGIGHVKIVRIHSRVP 190

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP R++ E++  LK AG   ++A+HANHP E +  A +A +R+ +AGI ++SQSVLL+
Sbjct: 191 VADPTRVSDEMVAALKAAGATTWLALHANHPRELTAAARSACARIVDAGIPMVSQSVLLR 250

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDD   L  LMR FVE RIKPYYLHH DLA GT+H R T+E+G+ ++ +L+ ++SGLC
Sbjct: 251 GVNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEQGRALMRALRGRVSGLC 310

Query: 306 QPFYILDLPGGYGKVKIDTHNIKK----VGNGS------YCITDHHNIVHDYPPK 350
           QP Y+LD+PGGYGK  +    + +     G G       Y I D+   VH YPPK
Sbjct: 311 QPDYVLDIPGGYGKSPVGPDYLSQSDLTFGEGEHRPESRYRIVDYCGGVHLYPPK 365


>gi|91976978|ref|YP_569637.1| hypothetical protein RPD_2506 [Rhodopseudomonas palustris BisB5]
 gi|91683434|gb|ABE39736.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB5]
          Length = 363

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 183/350 (52%), Positives = 249/350 (71%), Gaps = 4/350 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L    L   +  D++++++  Y+IA+TP IA LI+P +P+DPIARQ+IP+ EE
Sbjct: 14  TLRQPAELIAQGLAPADAQDDLEQVAQRYAIAVTPDIAALIDPDDPDDPIARQYIPRAEE 73

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L  LP ER+DPIGD  HSP++GIVHR+ DR+LLKL+HVC VYCRFCFRREMVG  K   L
Sbjct: 74  LATLPIERDDPIGDGAHSPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRREMVGPGKDNSL 133

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S   T AAL YI+   +IWEVI TGGDPL+LS +RL  ++  L  I HV+I+RFH+R+P+
Sbjct: 134 SGDATAAALGYIRAHPEIWEVILTGGDPLMLSPRRLADIMAELATIDHVRIIRFHTRLPV 193

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            +P RI+ EL++ L+  GK V++A+HANHP E +  A AA +R+ +AGI ++SQSVLL G
Sbjct: 194 AEPARISAELVRALRVEGKTVWMALHANHPRELTTAARAACARIIDAGIPMVSQSVLLAG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMR FVE RIKPYYLHH DLA GT+H R ++ EGQ ++ +L+ ++SGLCQ
Sbjct: 254 VNDDAATLEALMRVFVECRIKPYYLHHGDLAPGTAHLRTSLAEGQALMRALRGRVSGLCQ 313

Query: 307 PFYILDLPGGYGKVKIDTHNIKK----VGNGSYCITDHHNIVHDYPPKSS 352
           P Y+LD+PGGYGK  +  + +        +  Y ++D+   VH YPPK +
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLAADDGTAADSRYRVSDYCGDVHLYPPKPA 363


>gi|27379499|ref|NP_771028.1| hypothetical protein blr4388 [Bradyrhizobium japonicum USDA 110]
 gi|27352651|dbj|BAC49653.1| blr4388 [Bradyrhizobium japonicum USDA 110]
          Length = 364

 Score =  369 bits (947), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 172/357 (48%), Positives = 241/357 (67%), Gaps = 11/357 (3%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL    +L   +L     +  ++ ++  Y++A+TP +  LI+  +P+DPIARQF+P   
Sbjct: 8   RTLREPAELVAEHLAPAAALPALERVAARYAVAITPALVELIDTSDPDDPIARQFVPTAA 67

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL + P E  DPIGD+ HSP+ GIVHRYPDR+L KL+HVC VYCRFCFRREMVG  K   
Sbjct: 68  ELEMQPGESADPIGDHPHSPVPGIVHRYPDRVLFKLVHVCAVYCRFCFRREMVGPGKDNA 127

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS     AA+ YI+   +IWEVI TGGDPL+LS +R+ +++  L  I HV+I+R H+RVP
Sbjct: 128 LSDSAYRAAVDYIRAHDEIWEVILTGGDPLMLSPRRMSEIMADLAGIDHVKIIRLHTRVP 187

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP R++ E++  LK AG   ++A+HANH  E +E A AA +RL +AGI ++SQSVLL+
Sbjct: 188 VADPARVSDEMVAALKVAGATTWVALHANHARELTEGARAACARLVDAGIPMVSQSVLLR 247

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+   L++LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ+++  L+ ++SGLC
Sbjct: 248 GVNDNVTALSDLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQELMRQLRGRVSGLC 307

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGS-----------YCITDHHNIVHDYPPKS 351
           QP Y++D+PGG GK  +  + +    N +           Y I D+   VH YPP++
Sbjct: 308 QPDYVIDIPGGAGKSPVGPNYVLAAQNTAPDAREAATETRYRIVDYCGDVHLYPPET 364


>gi|288959461|ref|YP_003449802.1| lysine 2,3-aminomutase [Azospirillum sp. B510]
 gi|288911769|dbj|BAI73258.1| lysine 2,3-aminomutase [Azospirillum sp. B510]
          Length = 345

 Score =  369 bits (946), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 174/343 (50%), Positives = 231/343 (67%), Gaps = 2/343 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPNDPIARQFIPQK 64
           K L S  DL  A L+  E  D ++ +++ Y++ALTP +   L    +P DP+  Q++P  
Sbjct: 2   KALHSVSDLVAAGLMTAEAGDAVRTVADRYAVALTPYLREALAGRTDPQDPLYAQYVPSP 61

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            E +  PEEREDPIGD   SP+KGIVHRYPDR+LLK LH C VYCRFCFRREMVG   G 
Sbjct: 62  AEAHSTPEEREDPIGDVARSPVKGIVHRYPDRVLLKPLHACAVYCRFCFRREMVGP-GGE 120

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            L++++ +AALAYI++  Q+WEV+ TGGDPL+LS +RL+ +++ L  + HV ++R HSR+
Sbjct: 121 ALTAEELDAALAYIRDHEQVWEVVITGGDPLLLSPRRLRGIVQALSAMPHVGVVRLHSRI 180

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P  DP R+ PEL++ L       +IA+H NH  E +    AA++RL  AGI L+ Q+VLL
Sbjct: 181 PAADPDRLTPELVEALTAPDLATWIAVHINHADELTAPVRAALARLVGAGIPLVGQTVLL 240

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           KGIND    L  L R  V  R+KPYYLHHPDLAAGTSHFR T+ EG+ +V  L+ K+SGL
Sbjct: 241 KGINDSHAALEALFRGMVRNRVKPYYLHHPDLAAGTSHFRPTLAEGRALVTGLRGKLSGL 300

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           CQP Y+LD+PGG+GK       I++ G   Y +TD    VHDY
Sbjct: 301 CQPTYVLDIPGGHGKAPAAPAWIEEEGEERYRVTDFTGRVHDY 343


>gi|16124969|ref|NP_419533.1| L-lysine 2,3-aminomutase [Caulobacter crescentus CB15]
 gi|13421941|gb|AAK22701.1| L-lysine 2,3-aminomutase, putative [Caulobacter crescentus CB15]
          Length = 345

 Score =  367 bits (941), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 176/346 (50%), Positives = 242/346 (69%), Gaps = 5/346 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL  A+ L  A L+  E++  ++ ++  Y++A+TP +A LI+P   +DPIARQF+P  E
Sbjct: 5   QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P E  DPIGD  HSP++GIVHRYPDR+LLK  H C VYCRFCFRREMVG +  + 
Sbjct: 65  ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+    +AA AYI ++ QIWEVI TGGDPL+LS +RL  ++  L  I HV+I+RFH+RVP
Sbjct: 125 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
            VDP  + PEL+  LK + K VY+A+HANH  E +  A AA +++ +AG+ ++SQ+VLL+
Sbjct: 185 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+PE L  LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+  +SGL 
Sbjct: 245 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP Y+LD+PGG+GKV +  + +    +G+  + D    V  YPP +
Sbjct: 305 QPTYVLDIPGGHGKVPVGPNYLS---DGA--VEDPDGAVRPYPPTA 345


>gi|221233690|ref|YP_002516126.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000]
 gi|220962862|gb|ACL94218.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000]
          Length = 358

 Score =  367 bits (941), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 176/346 (50%), Positives = 242/346 (69%), Gaps = 5/346 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL  A+ L  A L+  E++  ++ ++  Y++A+TP +A LI+P   +DPIARQF+P  E
Sbjct: 18  QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 77

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P E  DPIGD  HSP++GIVHRYPDR+LLK  H C VYCRFCFRREMVG +  + 
Sbjct: 78  ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 137

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+    +AA AYI ++ QIWEVI TGGDPL+LS +RL  ++  L  I HV+I+RFH+RVP
Sbjct: 138 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 197

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
            VDP  + PEL+  LK + K VY+A+HANH  E +  A AA +++ +AG+ ++SQ+VLL+
Sbjct: 198 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 257

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+PE L  LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+  +SGL 
Sbjct: 258 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 317

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP Y+LD+PGG+GKV +  + +    +G+  + D    V  YPP +
Sbjct: 318 QPTYVLDIPGGHGKVPVGPNYLS---DGA--VEDPDGAVRPYPPTA 358


>gi|115524934|ref|YP_781845.1| hypothetical protein RPE_2928 [Rhodopseudomonas palustris BisA53]
 gi|115518881|gb|ABJ06865.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisA53]
          Length = 361

 Score =  367 bits (941), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 177/348 (50%), Positives = 245/348 (70%), Gaps = 4/348 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL S  +L    L   EQ+  + E+++ Y++A+T  +A+LI+P +PNDPIARQ+IP  +
Sbjct: 12  RTLRSPAELVARGLAPAEQLAALDEVASRYAVAVTAAVADLIDPADPNDPIARQYIPSAQ 71

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL I   ER DPIGD  HSP+ GIVHR+ DR+L KL+ VC VYCRFCFRREMVG  K + 
Sbjct: 72  ELVISAAERADPIGDAAHSPVAGIVHRHADRVLFKLVSVCAVYCRFCFRREMVGPGKDSA 131

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS +   AA+ YI+   +IWEVI TGGDPL+LS +RL++V+  L  I+HV+I+RFH+RVP
Sbjct: 132 LSPQAYRAAIDYIRAHGEIWEVILTGGDPLMLSPRRLEEVMADLAAIEHVKIVRFHTRVP 191

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + +P RI+ +L+  LK  G   ++A+HANHP E +  A AA +R+ +AGI ++SQSVLL+
Sbjct: 192 VAEPSRISRDLVAALKADGVTTWVALHANHPRELTAAARAACARMVDAGIAMVSQSVLLR 251

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDD + LA LMR FVE RIKPYYLHH DLA GT+H R T+ EG++++  L+ ++SGLC
Sbjct: 252 GVNDDADTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGRELMRQLRGRVSGLC 311

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGS----YCITDHHNIVHDYPP 349
           QP Y+LD+PGG+GK  +    +  V +      Y + D+    H YPP
Sbjct: 312 QPDYVLDIPGGFGKAPVGPEYLSPVASSVETQHYRVMDYCGDTHLYPP 359


>gi|83310383|ref|YP_420647.1| lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1]
 gi|82945224|dbj|BAE50088.1| Lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1]
          Length = 344

 Score =  363 bits (933), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 170/342 (49%), Positives = 231/342 (67%), Gaps = 6/342 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL +AQDL++A LI    ++ +  ++  Y++ALTP + +LI+P +P DPIARQ++P  E
Sbjct: 5   RTLRTAQDLHDAGLIPS--VEAVAGVAEAYAVALTPAVVDLIDPADPADPIARQYVPSAE 62

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   PEE  DPIGD  +SP+KG+VHRYPDR+LL  L VCPVYCRFCFRR  VG    T 
Sbjct: 63  ELVTTPEELADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVGDGDAT- 121

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           ++  + + ALAY+  + +I EVI TGGDPL+L   RL  +L  +  I HV+++R HSRVP
Sbjct: 122 MTEAEIDTALAYVAGRPEIREVILTGGDPLMLPPPRLAALLGRIGAIAHVELIRIHSRVP 181

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP+R+ P+L + L    KPV++A+H NHP+E S  A   + RLA  G+ LLSQ+VLLK
Sbjct: 182 VSDPERVTPDLARVLGGGDKPVWLAVHVNHPHELSPLARGGLERLARTGVPLLSQTVLLK 241

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND   +L  L R  V  R++PYYLHHPDLA GTSHFR TIEEGQ ++ SL+ ++SG+ 
Sbjct: 242 GVNDSVSVLDELFRALVRNRVRPYYLHHPDLAPGTSHFRPTIEEGQALMRSLRGRLSGIA 301

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           QP Y+LD+PGG GKV +              + D    +HDY
Sbjct: 302 QPTYVLDIPGGAGKVPVGPQYWDGEAG---TVADPGGRLHDY 340


>gi|323138167|ref|ZP_08073240.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC
           49242]
 gi|322396629|gb|EFX99157.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC
           49242]
          Length = 363

 Score =  363 bits (933), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 170/320 (53%), Positives = 222/320 (69%), Gaps = 2/320 (0%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           ++ + + YS+A+TP +A LI+  +P DPIARQF+P   EL  LP+E  DPIGD+ HSP  
Sbjct: 42  LRGVESQYSVAVTPDMAALIDAADPADPIARQFLPDARELVTLPQELADPIGDDAHSPAP 101

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           G+VHRYPDR+LLKLL VCPVYCRFCFRRE VG  KG VLS + T+AAL YI    QI+EV
Sbjct: 102 GLVHRYPDRVLLKLLTVCPVYCRFCFRRETVGRGKGDVLSPEATDAALDYIAGHRQIFEV 161

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           I TGGDPL+LS +RL  V + L  I HV +LR H+R P   P  +  E +  L+E+GK +
Sbjct: 162 ILTGGDPLLLSGRRLSAVARRLAKIPHVAVLRVHTRAPTAAPDLVTQERLDALRESGKAL 221

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           Y+A+H NH  E +  A AAI+RL  AG  LLSQ+VLLKG+NDD + L  LMR  V LR+K
Sbjct: 222 YVALHVNHSRELTPAARAAIARLHEAGATLLSQTVLLKGVNDDADTLERLMRDLVALRVK 281

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
           PYYLHHPDLA GTSHFRL+++ G ++ + L  +++G+  P Y+LD+PGG+GK  +   + 
Sbjct: 282 PYYLHHPDLAPGTSHFRLSLDAGLRVHSELTRRVTGVAVPRYVLDIPGGFGKAPVS--DA 339

Query: 328 KKVGNGSYCITDHHNIVHDY 347
           +  G G + I D    VH Y
Sbjct: 340 ETDGEGGWRIADRSGRVHLY 359


>gi|146340545|ref|YP_001205593.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278]
 gi|146193351|emb|CAL77367.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278]
          Length = 364

 Score =  363 bits (931), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 180/358 (50%), Positives = 238/358 (66%), Gaps = 10/358 (2%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R  TL SA DL    L    +   ++ ++  Y++A+T  +A+LI+  +P+DPIARQF+P 
Sbjct: 6   RPTTLRSAADLVAQGLADPGEQATLERVAQRYAVAVTTHLADLIDSDDPDDPIARQFVPS 65

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
            +EL   P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K 
Sbjct: 66  ADELVGAPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
             LS      AL YI+   +IWEVI TGGDPL+LS +RL +++  L  I+HV+I+R H+R
Sbjct: 126 NALSEDAYCGALDYIRAHGEIWEVILTGGDPLMLSPRRLAEIMADLAAIEHVRIIRIHTR 185

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           +P+ DP RI P L++ LK  G  +++A+HANHP E S +  AA +RL +AGI L+SQSVL
Sbjct: 186 LPVADPARITPGLVEALKVKGAAIWVALHANHPRELSPDVRAACARLVDAGIPLVSQSVL 245

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+NDD   L  LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ ++SG
Sbjct: 246 LRGVNDDAATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLAEGQALIRALRGRVSG 305

Query: 304 LCQPFYILDLPGGYGKVKIDTHNI----------KKVGNGSYCITDHHNIVHDYPPKS 351
           LCQP Y+LD+PGGYGK  +    I                 Y + D+    H YPP  
Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYITAEESVAQDHAAAAQTRYRVVDYCGEAHLYPPAG 363


>gi|298292101|ref|YP_003694040.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM
           506]
 gi|296928612|gb|ADH89421.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM
           506]
          Length = 385

 Score =  362 bits (928), Expect = 6e-98,   Method: Compositional matrix adjust.
 Identities = 178/342 (52%), Positives = 241/342 (70%), Gaps = 3/342 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL    +L  A+L+  +    +  ++  Y++A+TP +A LI+P +P DPIARQF+P   
Sbjct: 16  RTLRRLDELVEASLVAPDP--RLDAVAARYAVAVTPTLAGLIDPADPADPIARQFVPDAR 73

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E+  LPEE EDPIGD  HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG    T 
Sbjct: 74  EIETLPEELEDPIGDEAHSPVAGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETS 133

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS +  EAALAY+    ++WEV+ TGGDPL+ + +RL  +++ L  I HV+I+RFH+RVP
Sbjct: 134 LSEEALEAALAYVAAHPEVWEVVVTGGDPLVAAPRRLADLMRRLAAIDHVKIVRFHTRVP 193

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           I  P+R+ P L+  L+ AG   Y A+HANH  E   EA AA++RLA+AGI L+ QSVLL 
Sbjct: 194 IASPERVTPALVDSLRAAGLTTYAAVHANHARELGPEARAALARLADAGIALVGQSVLLA 253

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDD + L+ L R  VE R+KPYYLHHPDLA GT+HFRLTIE GQ+++ +L+ ++SGL 
Sbjct: 254 GVNDDADTLSALFRALVENRVKPYYLHHPDLAPGTAHFRLTIERGQELMRALRGRVSGLA 313

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            P Y+LD+PGG+GKV +    ++    G + +TD+   VH Y
Sbjct: 314 IPTYVLDIPGGFGKVPVGPGYLEPTPEG-WRVTDYCGGVHAY 354


>gi|23014062|ref|ZP_00053900.1| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 343

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 174/351 (49%), Positives = 236/351 (67%), Gaps = 16/351 (4%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           +R  TL +AQDL +A LI+      +++++  Y++ LTP + +LI+P +P DPIARQ++P
Sbjct: 4   VRRHTLRTAQDLLDAGLIRDAA--AVEQVARTYAVGLTPAVVDLIDPADPADPIARQYVP 61

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
             EEL    EER DPIGD  +SP+KG+VHRYPDR+LL  L VCPVYCRFCFRR  VG  +
Sbjct: 62  SPEELTTTAEERADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVGDGE 121

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
            T ++  + EAALAY+  +  I EVI TGGDPL+L   RL  +L  +  I HV+++R HS
Sbjct: 122 AT-MTEAEIEAALAYVACRPDIREVILTGGDPLMLPAPRLGALLDRIGAIGHVELIRIHS 180

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           RVP+ DP RI P+L   L    KPV++A+H NHP E S  A A +S LA AG+ LLSQ+V
Sbjct: 181 RVPVSDPGRITPDLATVLGGGDKPVWLAVHVNHPREVSPLASAGLSMLARAGVPLLSQTV 240

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKG+ND  ++L +L R  +  R++PYYLHHPDLA GTSHFR +I+EGQ ++  L+ ++S
Sbjct: 241 LLKGVNDRADVLDDLFRALIRNRVRPYYLHHPDLAPGTSHFRPSIKEGQALMRVLRGRLS 300

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY-----CITDHHNIVHDYP 348
           G+ QP Y+LD+PGG GKV         VG G +      + D ++  H YP
Sbjct: 301 GIAQPTYVLDIPGGAGKV--------PVGPGYWDGEEGVVIDPNDAEHSYP 343


>gi|158424552|ref|YP_001525844.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571]
 gi|158331441|dbj|BAF88926.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571]
          Length = 375

 Score =  360 bits (924), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 167/342 (48%), Positives = 228/342 (66%), Gaps = 1/342 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
            TL +A DL  A L    +   +  +   Y++A+TP +   ++  + +DPIARQF+P   
Sbjct: 29  STLRTADDLIAAGLAPAAERAVLDAVGARYAVAVTPELVAAMDRTDASDPIARQFVPDVA 88

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P+E  DPIGD+ HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG    T 
Sbjct: 89  ELRTDPQELVDPIGDDAHSPVPGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETA 148

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+    E AL Y+    ++WEVI TGGDP ++S +R+  V+  L  I HV+++RFH+RVP
Sbjct: 149 LTPDMLERALGYVAAHPEVWEVILTGGDPFMVSPRRMADVVGRLAAIPHVKVVRFHTRVP 208

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           I  P+R++ E+++ LK  G   Y+A+H NH  E  + A AA+ RLA+AGI LLSQ+VLLK
Sbjct: 209 IAAPERVSEEMVRALKAPGVAAYVAVHVNHARELGDAATAALGRLADAGIPLLSQTVLLK 268

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND  E L  L R  VE R+KPYYLHHPDLA GT HFRL++ EGQ +V +L+ ++SG+ 
Sbjct: 269 GVNDRVETLDALFRALVERRVKPYYLHHPDLAPGTGHFRLSVPEGQALVRALRGRLSGIA 328

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           QP Y+LD+PGG GKV +    +   G G + + D+   +H Y
Sbjct: 329 QPTYVLDIPGGAGKVPLTPGYLTPQGAG-WHVADNCGGIHAY 369


>gi|254292405|ref|YP_003058428.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC
           49814]
 gi|254040936|gb|ACT57731.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC
           49814]
          Length = 348

 Score =  358 bits (919), Expect = 7e-97,   Method: Compositional matrix adjust.
 Identities = 165/344 (47%), Positives = 236/344 (68%), Gaps = 1/344 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           KTL SAQD  N  +   E    I  +S  Y++A+T  +A+ +   + +DP+ RQF+P  +
Sbjct: 3   KTLKSAQDFKNLGITSPEITQNIDTVSTKYAVAMTTELADCVKNPSSDDPVLRQFLPLID 62

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL  LPEEREDPIGD  ++P++GIVHR+ DR+LLK++ +CPVYCRFCFRREMVG  K  +
Sbjct: 63  ELTTLPEEREDPIGDWPNTPVEGIVHRHKDRVLLKIVSICPVYCRFCFRREMVGPDKDNM 122

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L  +  +AA+ YI    +IWEVI TGGDP++LS +R +++ + L  I HV+I+R+H+R+P
Sbjct: 123 LRPEQLDAAIDYIANHPEIWEVILTGGDPMMLSPRRARELTQRLEAIPHVKIIRWHTRMP 182

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +  P  +  E  Q +K + K V++A+HANH  EFS  A  A + L +AGI ++SQSVLLK
Sbjct: 183 VAKPDIVTAEYAQAIKSSTKSVFVALHANHANEFSNAAKQACANLIDAGIPMVSQSVLLK 242

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+ + L++LMRTFVE RI+PYYLHHPD A GTSHFR+++EEGQK+V  L+  +SGLC
Sbjct: 243 GVNDNLDALSDLMRTFVENRIRPYYLHHPDFAPGTSHFRVSVEEGQKLVQGLRNTLSGLC 302

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
            P Y++D+PGG  K      + +++ +G   +         YPP
Sbjct: 303 TPTYVVDIPGGVSKAIATPSDAREI-DGQLSLRGQDGQWRAYPP 345


>gi|83591564|ref|YP_425316.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170]
 gi|83574478|gb|ABC21029.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170]
          Length = 324

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 170/317 (53%), Positives = 219/317 (69%), Gaps = 2/317 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +L S  DL  A LI  E++ E+  +   Y++A+   +A  I    P+  +ARQF+P   E
Sbjct: 6   SLRSLTDLAEAGLIAPERLAELAPVVARYALAIPAGLAQAIAEAGPDSALARQFVPSAAE 65

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L  LPEE  DPIGD+ HSP+KG+VHRYPDR+LLK +H CPVYCRFCFRRE VG   G  L
Sbjct: 66  LTTLPEEITDPIGDHAHSPVKGLVHRYPDRVLLKPVHACPVYCRFCFRREHVG-PGGESL 124

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +    LAYI +  +IWEV+ +GGDP+ILS +RL  +L  L  I H+  LR HSRVP+
Sbjct: 125 SEAEMARVLAYIGDHREIWEVVLSGGDPMILSARRLDALLGALEAIPHIGSLRIHSRVPV 184

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           +DP RI P +I  L+ + KPV++ IHANHP EF+  A A ++ LA+AG+ LLSQSVLLKG
Sbjct: 185 LDPARITPAVIAALRRS-KPVWLVIHANHPDEFTAAARACVASLADAGVPLLSQSVLLKG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMRTFV  RIKPYYLH  D+A GT+HFR +++EG+ +VA+L+   SGLCQ
Sbjct: 244 VNDDLATLTRLMRTFVANRIKPYYLHQTDMAPGTAHFRTSLDEGRALVAALRATASGLCQ 303

Query: 307 PFYILDLPGGYGKVKID 323
           P Y+LD P G GK  ID
Sbjct: 304 PTYVLDAPDGPGKRPID 320


>gi|114797088|ref|YP_761814.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444]
 gi|114737262|gb|ABI75387.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444]
          Length = 349

 Score =  356 bits (913), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 163/323 (50%), Positives = 227/323 (70%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T   A +L  A +I  +Q+  +  ++ +Y IAL   +A LI+  +P DPI  Q++P  EE
Sbjct: 5   TYRHAGELLTAGIISADQLPVVSRVAENYVIALPARLATLIDRDDPLDPIGLQYVPSGEE 64

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           LN  P E +DPIGD  HSP+ GIVHRYPDR+LLK+   CPVYCRFCFRRE VG +KG  L
Sbjct: 65  LNAQPGEMDDPIGDAAHSPIPGIVHRYPDRVLLKITSTCPVYCRFCFRRERVGPEKGDAL 124

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  + +AA AYI ++ +I+EVI TGGDP+ILS  R   + + L  I HV+++R+HSRVP+
Sbjct: 125 SKAEIDAACAYIADRPEIFEVILTGGDPMILSPARAGALTRRLEAIDHVKVIRWHSRVPV 184

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
             P+R+ PE  + ++ + K V++A+HANH  EF+ EA+AAI RL+ AGI L+SQSVLL+G
Sbjct: 185 AAPERVTPEFTEAIRSSEKAVFVAVHANHAREFTPEAVAAIRRLSQAGISLVSQSVLLRG 244

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  E LA+LMR F+ + IKPYYLH  D A GTSHFR+ +EEGQ +V  L++++SGL  
Sbjct: 245 VNDTFEALADLMRAFLSVGIKPYYLHQLDAAPGTSHFRVPVEEGQALVRRLRDELSGLAT 304

Query: 307 PFYILDLPGGYGKVKIDTHNIKK 329
           P Y+ D+PGG  K  ++  +I++
Sbjct: 305 PTYVADIPGGVSKAVMNLPDIER 327


>gi|148255402|ref|YP_001239987.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
 gi|146407575|gb|ABQ36081.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
          Length = 364

 Score =  355 bits (912), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 180/358 (50%), Positives = 240/358 (67%), Gaps = 10/358 (2%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R  TL SA DL    L        ++ ++  Y++A+T  +A+LI+  +P+DPIARQF+P 
Sbjct: 6   RPTTLRSAADLVAQGLAAPSDEATLERVAQRYAVAVTTHLADLIDADDPDDPIARQFVPS 65

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
            +EL   P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K 
Sbjct: 66  ADELKAHPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
             LS +   AALAYI+   +IWEVI TGGDPL+LS +RL++++  L  I HV+I+R H+R
Sbjct: 126 NALSEEAYRAALAYIRSHGEIWEVILTGGDPLMLSPRRLKEIMADLAAIDHVRIIRIHTR 185

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           +P+ DPQRI   L+  LK  G   ++A+HANHP E +    +A +RL +AGI L+SQSVL
Sbjct: 186 LPVADPQRITAALVDALKVQGAATWVALHANHPRELNAAVRSACARLIDAGIPLVSQSVL 245

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+NDD   L  LMR FVE RIKPYYLHH DLA GT+H R T+E GQ ++ +L+ ++SG
Sbjct: 246 LRGVNDDVATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLEHGQSLLRALRGRVSG 305

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIK---------KVGNGS-YCITDHHNIVHDYPPKS 351
           LCQP Y+LD+PGGYGK  +    +            G  + Y + D+    H YPP +
Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYLTAEDFVEQDHAAGTQTRYRVIDYCGEAHLYPPAA 363


>gi|197106130|ref|YP_002131507.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1]
 gi|196479550|gb|ACG79078.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1]
          Length = 341

 Score =  355 bits (911), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 171/346 (49%), Positives = 235/346 (67%), Gaps = 8/346 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + L + +DL  A L     ++ +  ++  Y++A+TP +A L       + +ARQF+P   
Sbjct: 3   RPLRTPEDLIAAGLAPAAALEGLARVAERYAVAITPDMAGL---SETCEGVARQFVPTAA 59

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   PEER DPIGD  HSP++GIVHRYPDR+LLK  H C VYCRFCFRREMVG +    
Sbjct: 60  ELVQTPEERADPIGDEAHSPVEGIVHRYPDRVLLKANHACAVYCRFCFRREMVGPEGVRP 119

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS    +AA+AY+  + +IWEVI TGGDPLILS +RL  +   L  I HV+++RFH+RVP
Sbjct: 120 LSPAALDAAMAYVAARPEIWEVIVTGGDPLILSPRRLADIGARLAGIPHVKVVRFHTRVP 179

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
            VDP ++   +++ LK +GK V++A+HANHP E +  A+AA +R+ +AGI ++SQ+VLLK
Sbjct: 180 AVDPGKVTAGVVEALKASGKTVWVALHANHPDELTPAALAACARIVDAGIPMVSQTVLLK 239

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GINDDP++L  LMR FVE RIKPYYLHH DLA GT HFR T+ EGQ ++ +L+ ++SGL 
Sbjct: 240 GINDDPDVLDALMRRFVETRIKPYYLHHGDLAPGTGHFRATLAEGQDLMRALRGRLSGLA 299

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP Y+LD+PGG+GK  +    +     G   + D     H YPP++
Sbjct: 300 QPTYVLDIPGGHGKAPVGPAYVH---GGE--VEDPQGRRHAYPPEA 340


>gi|90424304|ref|YP_532674.1| hypothetical protein RPC_2807 [Rhodopseudomonas palustris BisB18]
 gi|90106318|gb|ABD88355.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18]
          Length = 368

 Score =  355 bits (910), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 178/349 (51%), Positives = 237/349 (67%), Gaps = 4/349 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L    L+  +Q+  +  ++  Y++A+T  +A LI+P +P+DPIARQ+IP   E
Sbjct: 20  TLRQPAELAARGLVAADQLPTLDAVAQRYAVAVTEAVAALIDPTDPDDPIARQYIPSAAE 79

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   P ER DPIGD  H+PL GIVHR+ DR+L KL++VC VYCRFCFRRE VG  K   L
Sbjct: 80  LVRDPVERADPIGDAAHAPLDGIVHRHTDRVLFKLVNVCAVYCRFCFRRETVGPGKAATL 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S +   AAL YI+   +IWEVI TGGDPL+LS +RL + +  L  I HV+I+R HSRVP+
Sbjct: 140 SGEAYRAALDYIRAHPEIWEVILTGGDPLMLSPRRLGEAMSDLAAIDHVKIIRIHSRVPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            +P RI+ EL+  L+ +G  V++A+HANHP E S  A AA +R+ +AGI ++SQSVLL+G
Sbjct: 200 AEPSRISRELVGALQVSGATVWMALHANHPRELSAAARAACARIIDAGIPMVSQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   LA LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++  L+ ++SGLCQ
Sbjct: 260 VNDDGPTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRQLRGRVSGLCQ 319

Query: 307 PFYILDLPGGYGKVKID----THNIKKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGGYGK  +     T   +   +  Y +TD+    H YPP S
Sbjct: 320 PDYVLDIPGGYGKAPVGPNYLTPADEPAADLRYRVTDYCGDAHLYPPTS 368


>gi|46203355|ref|ZP_00051632.2| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 312

 Score =  350 bits (899), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 163/309 (52%), Positives = 213/309 (68%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L S   L  A LI    +  ++ ++  Y++++T  +A LI P  P+DPIARQF+P+ EE
Sbjct: 4   ALKSTAALARAGLIDAAVLPVLERVAARYAVSVTADMAELIEPGRPDDPIARQFVPRAEE 63

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   P ER DPIGD+ H P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG +    L
Sbjct: 64  LETNPRERADPIGDDVHEPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPEGQGSL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +   A  YI +  +IWEV+ TGGDP  LS +RL  + + L  I HV++LRFH+RVP+
Sbjct: 124 SEAELAVAYRYIADHPEIWEVVVTGGDPFALSPRRLAGIAEALAAIPHVRVLRFHTRVPM 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V+P RI+  L+  LK     V++A+HANHP EF+  A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARIDERLVAALKRFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD + L  LMR FVE RIKPYYLH  DLA GT H R T+ EGQ ++  L+ ++SGL Q
Sbjct: 244 VNDDADTLEALMRGFVENRIKPYYLHQGDLAPGTGHLRTTLPEGQALMRRLRGRLSGLAQ 303

Query: 307 PFYILDLPG 315
           P Y+LD+P 
Sbjct: 304 PLYVLDIPA 312


>gi|144898375|emb|CAM75239.1| Protein of unknown function DUF160 [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 353

 Score =  347 bits (890), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 162/346 (46%), Positives = 233/346 (67%), Gaps = 9/346 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           ++L    DL  A L+ + Q   +  ++    IA+TP +A+LI+  +  DPIARQ++P   
Sbjct: 13  RSLRRVDDLIGAGLVDESQRAALDAVARSSVIAITPAVADLIDAGDAADPIARQYVPNAA 72

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL++  EER DPIGD+  SP+KG+VHRYPDR LLK + VCPVYCRFCFRRE VG   GT 
Sbjct: 73  ELHVAAEERADPIGDDAFSPVKGVVHRYPDRALLKPILVCPVYCRFCFRREAVGDADGT- 131

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS+ + + ALAY+  ++ + E+I TGGDPL+L+  RL  ++  +  + H+++LRFHSRVP
Sbjct: 132 LSAAELDEALAYLAGQTDLREIIVTGGDPLMLNAARLADLVARIAQLPHIEVLRFHSRVP 191

Query: 186 IVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           + DP+R++  +   LK      V++++H NHP E S  A  A+ RLA+AG+ L+SQSVLL
Sbjct: 192 VADPERVSSAMASALKSTETLAVWVSVHVNHPRELSAIAGKALRRLADAGVPLVSQSVLL 251

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           KG+NDDP +L  L R  +  R++PYYLHHPDL  GTSHFR ++ EGQ I+ +L+ ++SG+
Sbjct: 252 KGVNDDPAVLEELFRALIRNRVRPYYLHHPDLTRGTSHFRPSLAEGQAIMRALRGRLSGI 311

Query: 305 CQPFYILDLPGGYGKVKI--DTHNIKKVGNGSYCITDHHNIVHDYP 348
            QP Y+LD+PGG GKV +  D  + +++      +TD     H YP
Sbjct: 312 AQPTYVLDIPGGAGKVPVGPDWWDGERL-----QVTDWRGRRHPYP 352


>gi|329114964|ref|ZP_08243719.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001]
 gi|326695407|gb|EGE47093.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001]
          Length = 349

 Score =  323 bits (828), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 156/325 (48%), Positives = 214/325 (65%), Gaps = 4/325 (1%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R KTL +  DL  A L+  +Q + + +++ HY+ A+ P   +LI   +P+DPI  Q +P 
Sbjct: 11  RRKTLRTPDDLIAAGLVPPQQHEMLDDVAQHYATAIPPAFLDLIT--SPDDPIGVQVVPS 68

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
            +EL I PEER DPIGDN  SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG   G
Sbjct: 69  AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
            VL     E AL +++   QI EVI TGGDPL+LS +RL  ++  L  + HV  +R HSR
Sbjct: 129 -VLDDAALEQALEWLRTHKQIREVILTGGDPLMLSPRRLGHIVAELSRMPHVTTIRVHSR 187

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+ DP+R+   L+  L E  K +++A+H NH  E SE A A + R+   GI LL QSVL
Sbjct: 188 VPVADPERVTDALLDAL-ETNKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+ND  + L +L R  VE R++PYYLH  D A GT+HF + +EEGQ+++A L+ +++G
Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIK 328
           L  P Y+LD+PGGYGKV +    ++
Sbjct: 307 LAWPLYVLDIPGGYGKVPLGPEYVQ 331


>gi|258541375|ref|YP_003186808.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632453|dbj|BAH98428.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635510|dbj|BAI01479.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638565|dbj|BAI04527.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641619|dbj|BAI07574.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644674|dbj|BAI10622.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-26]
 gi|256647729|dbj|BAI13670.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-32]
 gi|256650782|dbj|BAI16716.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256653773|dbj|BAI19700.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-12]
          Length = 349

 Score =  322 bits (826), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 156/319 (48%), Positives = 211/319 (66%), Gaps = 4/319 (1%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R KTL +  DL  A L+  +Q + + +++ HY+ A+ P   +LI    P+DPI  Q +P 
Sbjct: 11  RRKTLRTPDDLIAAGLVPPKQHEMLDDVAQHYATAIPPAFLDLIT--APDDPIGVQVVPS 68

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
            +EL I PEER DPIGDN  SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG   G
Sbjct: 69  AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
            VL     E AL +++   QI EVI TGGDPL+LS +RL  ++  L  + HV  +R HSR
Sbjct: 129 -VLDDAALEQALEWLRTHEQIREVILTGGDPLMLSPRRLGHIVAALSAMPHVTTIRVHSR 187

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+ DP+R+   L+  L E  K +++A+H NH  E SE A A + R+   GI LL QSVL
Sbjct: 188 VPVADPERVTDALLDAL-ETDKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+ND  + L +L R  VE R++PYYLH  D A GT+HF + +EEGQ+++A L+ +++G
Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306

Query: 304 LCQPFYILDLPGGYGKVKI 322
           L  P Y+LD+PGGYGKV +
Sbjct: 307 LAWPLYVLDIPGGYGKVPL 325


>gi|294675951|ref|YP_003576566.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003]
 gi|294474771|gb|ADE84159.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003]
          Length = 350

 Score =  311 bits (798), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 158/341 (46%), Positives = 208/341 (60%), Gaps = 5/341 (1%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           LT  +DL    L+   Q+ ++ +++  + I +TP +   I    P DP+A QF+P   EL
Sbjct: 9   LTRPEDLLAEGLVTPGQMPDLTQVAQDFRIRVTPAMRAAIT--APADPVAAQFVPSAAEL 66

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
              PEER DPIGD  HSP  G+ HRYPDR +L +   C VYCRFCFRRE VG      L 
Sbjct: 67  ITRPEERADPIGDAVHSPAPGLTHRYPDRAILHITKTCDVYCRFCFRRETVGETGP--LP 124

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             D   AL YI     + E+I TGGDPL LS +RL+ VL  L  I H+  LRFHSRVP+V
Sbjct: 125 EPDLAQALEYIAATPALREIILTGGDPLTLSPRRLEDVLTRLSAIPHITTLRFHSRVPVV 184

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P+RI P L+  L+     V++ +H NH  E +  A AA++RL +AG+ LLSQSVLLKG+
Sbjct: 185 APERITPALVALLRAQRPAVWVVVHTNHAQELTAPARAALARLVDAGVPLLSQSVLLKGV 244

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND  + L +L R   + R+KPYYLHH DLA GT HFR TI  G+ ++A L+  +SG   P
Sbjct: 245 NDSHDALRDLFRALQDCRVKPYYLHHCDLAPGTGHFRTTIAAGRALMAGLRGPLSGAAIP 304

Query: 308 FYILDLPGGYGKVKIDTHNIKKVGN-GSYCITDHHNIVHDY 347
            Y+LD+PGG+GKV I   ++      G + +TD    VHDY
Sbjct: 305 TYVLDIPGGFGKVPITADHVAPGARPGLWRVTDWRGGVHDY 345


>gi|332560846|ref|ZP_08415164.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N]
 gi|332274644|gb|EGJ19960.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N]
          Length = 340

 Score =  311 bits (798), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 158/343 (46%), Positives = 219/343 (63%), Gaps = 10/343 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
           + L S +DL +A L    + + ++E++  + I LTP +         +DP +ARQF+P  
Sbjct: 3   RALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           +EL I PEE  DPIGD   SP+ G+ HRYPDR++L +   C VYCRFCFRRE+VGS+   
Sbjct: 57  DELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
           +L   D  AAL YI     + EVI TGGDPL LS +RL+ ++  L  I H+  +R HSRV
Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V P RI+  +++ L     PV+I +H NHP E   +A AA+ RLA+ GI LLSQSVLL
Sbjct: 175 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           +G+ND  E L +L R  + LR+KPYYLHH DLA G  HFR TI+EG+ ++A L+ +I+G+
Sbjct: 234 RGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRITGI 293

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             P Y+LDLPGG+GKV +   ++   G G + + D    +H Y
Sbjct: 294 GLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPY 336


>gi|119384403|ref|YP_915459.1| lysine 2,3-aminomutase YodO family protein [Paracoccus
           denitrificans PD1222]
 gi|119374170|gb|ABL69763.1| L-lysine 2,3-aminomutase [Paracoccus denitrificans PD1222]
          Length = 366

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 161/345 (46%), Positives = 219/345 (63%), Gaps = 4/345 (1%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L  + +T+   L  A L    + + + +++  + I ++P +   +    P D IA QF+P
Sbjct: 21  LSQRPITTVPALVEAGLADPARAEVLDKVAAEFRIRISPAMREAMG--APGDGIAAQFVP 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              EL I PEE  DPI D   SP  G+ HRYPDR++L +   C VYCRFCFRRE+VG ++
Sbjct: 79  DARELQIRPEELADPISDAAFSPTPGLTHRYPDRVILHVTRTCEVYCRFCFRREVVG-EE 137

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           GT L   D  AAL Y+     I EVI TGGDP++LS +R+  ++  L  I HV I+RFH+
Sbjct: 138 GT-LPEPDLAAALDYVARTPAIHEVILTGGDPMVLSPRRIAALMARLEAIPHVDIVRFHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           RVP+V P RI+  ++  L      V++ IH NH  E +  A AA++RLA+AGI LLSQ+V
Sbjct: 197 RVPVVAPSRIDAAMLAALHPRRLAVWVVIHTNHAQELTAGARAALARLADAGIPLLSQTV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKG+N DPE+LA+L R  +  R+KPYYLHH DLA GT HFR TI EGQ I+A L+ ++S
Sbjct: 257 LLKGVNADPEVLADLFRALIRNRVKPYYLHHCDLARGTGHFRTTIAEGQAIMAGLRGRLS 316

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           G C P Y+LDLPGG+GKV +   ++K+ G G Y I D     H+Y
Sbjct: 317 GTCLPTYVLDLPGGHGKVPLGPDHVKETGPGRYLIRDWRGKDHEY 361


>gi|221369244|ref|YP_002520340.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131]
 gi|221162296|gb|ACM03267.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131]
          Length = 345

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 159/346 (45%), Positives = 220/346 (63%), Gaps = 10/346 (2%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFI 61
           L  + L S +DL +A L    + + ++E++  + I LTP +         +DP +ARQF+
Sbjct: 5   LMDRALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFV 58

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  +EL I PEE  DPIGD   SP+ G+ HRYPDR++L +   C VYCRFCFRRE+VGS+
Sbjct: 59  PTLDELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSE 118

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
              +L   D  AAL YI     + EVI TGGDPL LS +RL+ ++  L  I H+  +R H
Sbjct: 119 G--ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIH 176

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SRVP+V P RI+  +++ L     PV+I +H NHP E   +A AA+ RLA+ GI LLSQS
Sbjct: 177 SRVPVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQS 235

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+ND  E L +L R  + LR+KPYYLHH DLA G  HFR TI+EG+ ++A L+ +I
Sbjct: 236 VLLRGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRI 295

Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           +G+  P Y+LDLPGG+GKV +   ++   G G + + D    +H Y
Sbjct: 296 TGIGLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPY 341


>gi|310816895|ref|YP_003964859.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium
           vulgare Y25]
 gi|308755630|gb|ADO43559.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium
           vulgare Y25]
          Length = 343

 Score =  308 bits (788), Expect = 9e-82,   Method: Compositional matrix adjust.
 Identities = 152/340 (44%), Positives = 205/340 (60%), Gaps = 14/340 (4%)

Query: 18  NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
            LI       ++ ++  + + +TP +   I     +D +  QF+P + ELN+LP E  DP
Sbjct: 4   GLISPADAAALRPVTETFRMRITPQMRTAIT--RADDGVGLQFVPDRRELNVLPSELTDP 61

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
           IGD  HSP KGI HRYPDR++  +  VC VYCRFCFRRE+VG     VL + D  AAL Y
Sbjct: 62  IGDGAHSPTKGITHRYPDRVIFHVTQVCEVYCRFCFRREVVGENG--VLPAGDVAAALDY 119

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
           I+    I EVI TGGDPL LS +RL ++   L  I HV ++R H+RVP+V P RI PE+I
Sbjct: 120 IRRTPAINEVILTGGDPLSLSPRRLHEITTALAAIPHVGLMRIHTRVPVVAPNRITPEMI 179

Query: 198 QCLKEAGKPVYIAIHANHP----------YEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
             L   G   ++ +H NHP           EF  EA+AA+  L  AG+ LLSQSVLL+G+
Sbjct: 180 AALTAPGLQTWLVLHTNHPQEFIPEAGGALEFIPEAVAALDLLRTAGVPLLSQSVLLRGV 239

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   +L +L  T + L +KPYYLHH DLA GTSH+R TI  G+ ++ +L+ +ISG   P
Sbjct: 240 NDSVAVLKSLFTTLLRLGVKPYYLHHCDLARGTSHYRTTIAAGRALMRALRGQISGSALP 299

Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            Y+LD+PGG+GKV I         +G + +TD +   H Y
Sbjct: 300 TYVLDIPGGFGKVPITADYFDGGADGRWQVTDPNGGTHIY 339


>gi|296535943|ref|ZP_06898093.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957]
 gi|296263737|gb|EFH10212.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957]
          Length = 683

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 151/330 (45%), Positives = 205/330 (62%), Gaps = 1/330 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           +L+ +TL  A  L  A L        ++ +   Y+IALTP +  LI+  +P DPIARQ++
Sbjct: 337 RLKPRTLRDAAALVEAGLAPASAQPALEALQQVYAIALTPAVQALIDRADPADPIARQYV 396

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   EL  LP ER DP  D   +P+KG+VHRYPDR LLK L  CPVYCRFCFRRE+VG  
Sbjct: 397 PDPAELVTLPRERSDPTSDAPFTPVKGVVHRYPDRALLKPLLACPVYCRFCFRREVVGP- 455

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
            G +LS  + EAAL +     Q+ E I TGGDPL+LS +RL  +L  L  I H+ I+R H
Sbjct: 456 DGGLLSEPELEAALDWFARTPQVREAILTGGDPLMLSPRRLAHILARLSSIPHLDIIRLH 515

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +RVP+  P+R+   L   L    K +++ +HANH  EFS  A  A++RL  AG+ LL QS
Sbjct: 516 TRVPVAAPERVTAALADTLAATDKALFLCVHANHAREFSAGARTALTRLRRAGVALLGQS 575

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+ND  + LA L R  +  ++KPYYLH  D A GT+ F + IE+G+ I+ +L+  +
Sbjct: 576 VLLRGVNDSADALAALFRAMLAAQVKPYYLHQLDRAPGTARFEVPIEQGRAILRALRGTL 635

Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331
           +GL  P Y+LDLPGG GK  +     +  G
Sbjct: 636 TGLAWPAYVLDLPGGAGKAPLGPDFARAEG 665


>gi|126464702|ref|YP_001045815.1| lysine 2,3-aminomutase YodO family protein [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126106513|gb|ABN79043.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17029]
          Length = 345

 Score =  307 bits (786), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 156/346 (45%), Positives = 219/346 (63%), Gaps = 10/346 (2%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFI 61
           L  + + S +DL +A L    + + ++E++  + I LTP +         +DP +ARQF+
Sbjct: 5   LMDRAVESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFV 58

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  +EL I PEE  DPIGD   SP+ G+ HRYPDR++L +   C VYCRFCFRRE+VG++
Sbjct: 59  PTLDELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGNE 118

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
              +L   D  AAL YI     + EVI TGGDPL LS +RL+ ++  L  I H+  +R H
Sbjct: 119 G--ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIH 176

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SRVP+V P RI+  +++ L     PV+I +H NHP E   +A AA+ RLA+ GI LLSQS
Sbjct: 177 SRVPVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQS 235

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+ND  + L  L R  + LR+KPYYLHH DLA G  HFR TI+EG+ ++A L+ +I
Sbjct: 236 VLLRGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMADLRRRI 295

Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           +G+  P Y+LDLPGG+GKV +   ++   G G + + D    +H Y
Sbjct: 296 TGIGLPSYVLDLPGGFGKVPLTHDHLIADGPGRWQVRDPQGGLHPY 341


>gi|77465239|ref|YP_354742.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1]
 gi|77389657|gb|ABA80841.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1]
          Length = 340

 Score =  306 bits (785), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 156/343 (45%), Positives = 218/343 (63%), Gaps = 10/343 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
           + L + +DL +A L    + + ++E++  + I LTP +         +DP +ARQF+P  
Sbjct: 3   RALENLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           +EL I PEE  DPIGD   SP+ G+ HRYPDR++L +   C VYCRFCFRRE+VGS+   
Sbjct: 57  DELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
           +L   D  AAL YI     + EVI TGGDPL LS +RL+ ++  L  I H+  +R HSRV
Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V P RI+  +++ L     PV+I +H NHP E   +A AA+ RLA+ GI LLSQSVLL
Sbjct: 175 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           +G+ND  + L  L R  + LR+KPYYLHH DLA G  HFR TI+EG+ ++A L+ +I+G+
Sbjct: 234 RGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRPTIDEGRALMAELRRRITGI 293

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             P Y+LDLPGG+GKV +   ++   G G + + D    +H Y
Sbjct: 294 GLPSYVLDLPGGFGKVPLTYDHLIADGPGRWQVRDPQGGLHPY 336


>gi|330991009|ref|ZP_08314963.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1]
 gi|329761830|gb|EGG78320.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1]
          Length = 359

 Score =  306 bits (783), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 148/340 (43%), Positives = 217/340 (63%), Gaps = 4/340 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL S  DL  A L+   Q+  +++++ HY+ A+ P  A+LI    P+DPI RQ IP   
Sbjct: 17  RTLRSVTDLLAAGLVTPAQVPALEDVARHYATAIPPAFADLIE--TPDDPIGRQVIPDGA 74

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E++    E  DPIGD+  SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG   G+V
Sbjct: 75  EIHTDTTEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGP-GGSV 133

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L     E AL +++  + I EV+ TGGDPL+LS +R++ +++ L  + H+  +R HSRVP
Sbjct: 134 LDDAALEHALDWLRTHTGIHEVVMTGGDPLMLSARRMRAIMQALEGMDHIHTIRIHSRVP 193

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP R++ E+   L E  + +++ +H NH  E + +A AAI R+    I +L QSVLL+
Sbjct: 194 VADPGRLDDEMADAL-ETTRSMWLVVHVNHARELTPQARAAIRRVQARAIPVLGQSVLLR 252

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND P+ L  L+R  V  RI+PYYLH  D A GT+ F + I EGQ+++ASL+ +++G+ 
Sbjct: 253 GVNDTPQALEALLRAQVAARIRPYYLHQLDPAPGTARFHVPIREGQRLLASLRGRVTGIA 312

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
            P Y+LD+PGG+GKV I    + +  +G+   T     +H
Sbjct: 313 WPTYVLDIPGGHGKVPIAPGYLHEGPDGTLHATAPDGTIH 352


>gi|149196362|ref|ZP_01873417.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155]
 gi|149140623|gb|EDM29021.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155]
          Length = 341

 Score =  303 bits (777), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 156/341 (45%), Positives = 222/341 (65%), Gaps = 8/341 (2%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHNPNDPIARQFIPQKEE 66
           + + + L    LI  +  D +  ++  + I+L+P VI N+  P      I +Q++P KEE
Sbjct: 4   IRNTKALQEQGLISADDTDLLNRVAEKFQISLSPEVIKNIAEPE-----IRQQYLPTKEE 58

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L I  EE  DPIGD   +P+KGI HRYPDR+LLK LH C VYCRFCFRRE VG Q   +L
Sbjct: 59  LEIQEEELNDPIGDEKFTPVKGITHRYPDRVLLKPLHTCNVYCRFCFRREKVG-QADEIL 117

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
              + E AL YI+E+ ++WEVI TGGDPL LS  +L  +L  L  I HV+++R H+R+P+
Sbjct: 118 KQDELENALNYIRERQEVWEVILTGGDPLSLSADKLASILDQLEAIDHVKVIRIHTRIPL 177

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P++I+ EL++ L +  K +Y+ +H N   E S+     I +L+ AGI LLSQSVLLK 
Sbjct: 178 VAPEKISDELLKVL-DREKALYMILHCNSHKELSDNVCFGIKKLSRAGIPLLSQSVLLKN 236

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND  E L  L R+ V +R++PYYLHHPDLA GTSHFR+++E+G+++ + L++ +SG+ Q
Sbjct: 237 INDSVEKLEKLFRSLVAIRVRPYYLHHPDLAQGTSHFRVSLEKGRQVTSELRKSLSGIAQ 296

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           P Y+LD+PGG GKV      I+   + ++ I   H+   DY
Sbjct: 297 PLYVLDVPGGLGKVPAGKEFIQAKDDKTWKIQTIHDTFVDY 337


>gi|296114565|ref|ZP_06833218.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295978921|gb|EFG85646.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 351

 Score =  300 bits (768), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 145/340 (42%), Positives = 213/340 (62%), Gaps = 4/340 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL + +DL  A L+ +     ++ +++ Y+ A+ P  A LI   +P+DPI  Q IP   
Sbjct: 11  RTLRTVRDLVEAGLVSQAAQPALEAVAHDYATAIPPAFAALIE--HPDDPIGLQVIPDPA 68

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL+   EER DPIGD+  SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG   G V
Sbjct: 69  ELHTTTEERSDPIGDDALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG-V 127

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L     E AL +++    I EVI +GGDP++LS +R+  +++ L  + HV  +R H+RVP
Sbjct: 128 LDDAALERALDWLRAHPAIGEVILSGGDPMMLSPRRMGHIIRALEAMPHVHTIRIHTRVP 187

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP+R+  +++  L      +++ IHANH  E + +A  AI R+    I +++QSVLL+
Sbjct: 188 VADPERVTADMMAALDTTCS-LWMVIHANHARELTPQARKAIRRMQAQAIPVIAQSVLLR 246

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND P+ L +L+R  V  R+KPYYLH  D A GTS FR+ I EGQ+++A+L+ +++GL 
Sbjct: 247 GVNDTPQALEDLLRALVAARVKPYYLHQLDPAPGTSRFRVPIAEGQRLLAALRGRVTGLA 306

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
            P Y+LD+PGG+GKV I    +  V      + D     H
Sbjct: 307 WPTYVLDIPGGHGKVPIGPGYLDTVEGMGMQVRDPQGRPH 346


>gi|58038709|ref|YP_190673.1| lysine 2,3-aminomutase [Gluconobacter oxydans 621H]
 gi|58001123|gb|AAW60017.1| Lysine 2,3-aminomutase [Gluconobacter oxydans 621H]
          Length = 356

 Score =  299 bits (766), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 148/336 (44%), Positives = 213/336 (63%), Gaps = 5/336 (1%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           RH TL +  DL +A L  +     ++ +   +++A+ P   +LI   +P+DPIARQ IP 
Sbjct: 19  RH-TLRTPSDLIDAGLATEADRATLEAVGERFTMAIPPAFRDLIT--HPDDPIARQVIPD 75

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
             EL  LP E  DPIGD+  SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG   G
Sbjct: 76  ARELVTLPHEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGPGGG 135

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
            +LS+   E AL ++++   I E+I TGGDPL+L+ +RL+ ++++L  I H++ +R HSR
Sbjct: 136 -LLSNAQLETALDWVRQHPDIREIILTGGDPLMLAPRRLKHIVQSLSGIPHIETIRIHSR 194

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+ DP R+  EL+  + E  + +++ IHANH  E +  A  AI  + +  I +LSQSVL
Sbjct: 195 VPVADPARMTEELLDAM-ETDRAMWLVIHANHASELTPHATKAIRAVLSRAIPVLSQSVL 253

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+ND  E L  L+R  ++ R+KPYYLHH D AAGT HF + + +GQ ++  L+ +++G
Sbjct: 254 LRGVNDTVESLEALLRALIKARVKPYYLHHLDAAAGTGHFHVPVAQGQALLRQLRGRVTG 313

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
           L  P Y+LD+P G GKV I    +     G+    D
Sbjct: 314 LAWPTYVLDIPSGRGKVPIGPEYLDPASPGTVSTPD 349


>gi|162146333|ref|YP_001600792.1| L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209543664|ref|YP_002275893.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161784908|emb|CAP54451.1| putative L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531341|gb|ACI51278.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 382

 Score =  298 bits (762), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 147/326 (45%), Positives = 200/326 (61%), Gaps = 4/326 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +T+     L  A L+    +  ++E++  Y+ A+ P  A LI    P+DPI  Q +P   
Sbjct: 26  RTVRDVAGLVAAGLVSPGAVPALEEVARQYATAIPPAFAGLIT--RPDDPIGLQVVPDAS 83

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL I P ER DPIGD+  SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG   G V
Sbjct: 84  ELTIAPHERMDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGPDGG-V 142

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L     E AL +++    I EVI TGGDPL+LS +RL  +++ L  + HV  +R HSRVP
Sbjct: 143 LDDAALERALDWLRTHPAIREVILTGGDPLMLSPRRLGAIVRALGDMPHVTTIRIHSRVP 202

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP RI   L   + E  + +++ +HANH  EF+  A AA+ R+    I +L QSVLL+
Sbjct: 203 VADPGRITDALADAM-ETDRAMWVVVHANHAREFTPAARAALRRIQARAIPVLGQSVLLR 261

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND    L  L R  VE R+KPYYLH  D A GT+ F + I EG++++A L+ +++GL 
Sbjct: 262 GVNDSVAALEALFRAMVEARMKPYYLHQLDAAPGTARFHVPIAEGRRLLAGLRGRVTGLA 321

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVG 331
            P Y LD+PGGYGKV +    ++  G
Sbjct: 322 WPTYTLDIPGGYGKVPLGPDYLEPEG 347


>gi|146279243|ref|YP_001169401.1| hypothetical protein Rsph17025_3212 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557484|gb|ABP72096.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17025]
          Length = 340

 Score =  297 bits (761), Expect = 2e-78,   Method: Compositional matrix adjust.
 Identities = 150/342 (43%), Positives = 215/342 (62%), Gaps = 8/342 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + L S  DL    L+   + + + E++  + I +T    + +     +  +ARQF+P  +
Sbjct: 3   RALDSLDDLATLGLVDPAE-ERLAEVARAFRIRVT----SQMAAAAADPAVARQFVPTVD 57

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL I PEE  DPIGD   SP+ G+ HRY DR++L +   C VYCRFCFRRE+VGS+   +
Sbjct: 58  ELEIRPEELADPIGDEARSPVPGLTHRYTDRVILHVTRTCDVYCRFCFRREVVGSEG--L 115

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS  D  AAL YI+    + EVI TGGDPL LS +RL+ +++ L  I H+  +R HSRVP
Sbjct: 116 LSDADLTAALDYIEATPAVREVILTGGDPLTLSPRRLRGIIERLGQIAHLDQVRIHSRVP 175

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V PQR++ ++I+ L     PV+I +H NH  E   +A AA+ RLA+ G+ LLSQSVLL+
Sbjct: 176 VVAPQRVDEDMIRALL-GPVPVWIVVHVNHAAELRLDARAALGRLADRGVPLLSQSVLLR 234

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND  + L  L R  + LR+KPYYLHH DLA G  HFR +I +G+ I+A L+ +I+G+ 
Sbjct: 235 GVNDSADTLEALFRALLRLRVKPYYLHHCDLARGAGHFRTSIAQGRAIMAELRRRITGIG 294

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            P Y+LD+PGG+GKV +   ++   G G + + D    VH Y
Sbjct: 295 LPTYVLDIPGGFGKVPVTPDHVIPDGPGRWQVRDPQGGVHRY 336


>gi|326404849|ref|YP_004284931.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301]
 gi|325051711|dbj|BAJ82049.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301]
          Length = 325

 Score =  290 bits (743), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 149/310 (48%), Positives = 190/310 (61%), Gaps = 4/310 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL +A  L  A L        ++ ++  Y+ A+   +A LI   +P DPI  QFIP   E
Sbjct: 5   TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALIG--DPADPIGLQFIPDPAE 62

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   P ER DPIGD+  SP+ GIVHRYPDR LLK    CPVYCRFCFRRE VG + G VL
Sbjct: 63  LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  + EAA  ++ +   + EVI TGGDPLILS +RL  +   LR I H+  LR H+RVP+
Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP RI P L+  L +   P+++ +HANH  EF  EA A +  L  AGI LL QSVLL+G
Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + L  L  T +E  +KPYYLH  D A GT+ F + I EG+ ++A+L+  ISG   
Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPITEGRALIAALRGTISGHAL 300

Query: 307 PFYILDLPGG 316
           P YILD P G
Sbjct: 301 PTYILDSPAG 310


>gi|148261362|ref|YP_001235489.1| lysine 2,3-aminomutase YodO family protein [Acidiphilium cryptum
           JF-5]
 gi|146403043|gb|ABQ31570.1| L-lysine 2,3-aminomutase [Acidiphilium cryptum JF-5]
          Length = 325

 Score =  289 bits (740), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 149/310 (48%), Positives = 190/310 (61%), Gaps = 4/310 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL +A  L  A L        ++ ++  Y+ A+   +A LI   +P DPI  QFIP   E
Sbjct: 5   TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALIG--DPADPIGLQFIPDPAE 62

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   P ER DPIGD+  SP+ GIVHRYPDR LLK    CPVYCRFCFRRE VG + G VL
Sbjct: 63  LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  + EAA  ++ +   + EVI TGGDPLILS +RL  +   LR I H+  LR H+RVP+
Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP RI P L+  L +   P+++ +HANH  EF  EA A +  L  AGI LL QSVLL+G
Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + L  L  T +E  +KPYYLH  D A GT+ F + I EG+ ++A+L+  ISG   
Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPIVEGRALIAALRGTISGHAL 300

Query: 307 PFYILDLPGG 316
           P YILD P G
Sbjct: 301 PTYILDSPAG 310


>gi|114327751|ref|YP_744908.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1]
 gi|114315925|gb|ABI61985.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1]
          Length = 362

 Score =  286 bits (731), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 148/327 (45%), Positives = 205/327 (62%), Gaps = 6/327 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           ++L S  DL  A LI  E    ++ ++  Y+IA+ P +  LI   + +DPI  Q IP   
Sbjct: 25  RSLRSLADLRRAGLIDDEA--PLQAVAAQYAIAIPPAMQALIT--DRHDPIGLQVIPDPA 80

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E+   P E  DPIGD+  SP+ GIVHRYPDR LLK L +CPVYCRFCFRRE VG   G V
Sbjct: 81  EMITAPYENVDPIGDDALSPVPGIVHRYPDRALLKPLLICPVYCRFCFRREHVGPDGG-V 139

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS +    AL ++    QI EVI TGGDPL+LS +RL  ++  L  I H+ I+R HSRVP
Sbjct: 140 LSEEQLRIALDWLAGHPQIREVILTGGDPLMLSPRRLSFIINELNNIPHIDIIRIHSRVP 199

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP  +   ++  L E  K +++ +H N+  E ++ A  +I      GI +LSQ+VLL+
Sbjct: 200 VADPALVTQAMLDAL-ETDKAMFLVLHTNNVKELTDLAALSIQSFQRRGIPVLSQTVLLR 258

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND  E L  L R  + LR+KPYYLH  D A GT+ FR+ +EEG+ I+ +L+ +ISGL 
Sbjct: 259 GVNDSAEALEALYRRILRLRVKPYYLHQLDAAPGTARFRVPVEEGRAILHALRGRISGLA 318

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGN 332
            P Y++D+PGGYGKV +D   ++  G+
Sbjct: 319 WPTYVIDIPGGYGKVPVDPDYLESDGS 345


>gi|258545639|ref|ZP_05705873.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826]
 gi|258519106|gb|EEV87965.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826]
          Length = 326

 Score =  282 bits (721), Expect = 6e-74,   Method: Compositional matrix adjust.
 Identities = 130/271 (47%), Positives = 185/271 (68%), Gaps = 1/271 (0%)

Query: 52  PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
           P+DPIA QFIP   EL I   E  DPIGD  HSPL  +VHRYP+R+L K+  +C VYCRF
Sbjct: 40  PDDPIAAQFIPDARELTIAASELADPIGDAPHSPLPSLVHRYPNRVLWKISPICAVYCRF 99

Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           CFR+E +G ++G  L   +  A  AY+    QI E+I +GGDPL LS+K+L++ L  +R 
Sbjct: 100 CFRKEHIG-RRGQALRQSEIAAVSAYLAANPQIEEIILSGGDPLTLSNKKLRQNLAIIRD 158

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
           + H++ LR HSR+P+V P RI+  L+  L E  +  ++ +H NH  E +  A AA+ RL 
Sbjct: 159 LPHIRRLRIHSRIPVVQPARIDHALLDLLGEQPQSTHLVVHTNHSAELTPNARAALHRLR 218

Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
            +G++L SQ+VLLKG+N D   LANLM   ++  +KPYYLHH DLA GT H+R+++ EG+
Sbjct: 219 TSGVMLYSQTVLLKGVNADAATLANLMNDLLDCGVKPYYLHHLDLARGTGHYRVSLNEGR 278

Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            IVA+L+ ++SG+  P YI+++PGG GK+ +
Sbjct: 279 AIVAALRRRLSGIAMPTYIVEIPGGDGKIPV 309


>gi|146328795|ref|YP_001209500.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A]
 gi|146232265|gb|ABQ13243.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A]
          Length = 304

 Score =  272 bits (695), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 132/294 (44%), Positives = 199/294 (67%), Gaps = 5/294 (1%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           ++  Y + ++  + +LIN    +  IARQF+P ++EL + PEE  DPIGD  HSP+  +V
Sbjct: 1   MTRDYPVRISKTMNDLINH---SAAIARQFLPSEDELTVAPEELRDPIGDEAHSPVDFLV 57

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           HRY +R+L K+  VC V+CRFCFRRE++G QKG+       + A  Y+++  +I EVI +
Sbjct: 58  HRYRNRVLWKVTQVCAVHCRFCFRRELIG-QKGSRPDEAAIQQAHDYMRQHHEIEEVILS 116

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDP+ LS +RL+  +  L  I+H++ +R H+R+PIV P++I  E +  L++ GK +   
Sbjct: 117 GGDPMTLSAERLRLYVAPLLEIEHIRRIRVHTRMPIVAPEQIKEEWLTTLQKTGKQIVYV 176

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H NH  EF+  + + ++RLA   + LLSQ+VLL+G+NDD  +LA LM  F+  RIKPYY
Sbjct: 177 LHVNHADEFNPASDSLLARLATDHL-LLSQTVLLRGVNDDAAVLAQLMEAFLARRIKPYY 235

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
           LHH DLA GT HFR+TI+EG+ I   L++ +SG+  P YI+++PGG GK+ + T
Sbjct: 236 LHHLDLARGTGHFRVTIDEGRAIYQQLRQYVSGIALPTYIVEIPGGDGKIAVMT 289


>gi|149922522|ref|ZP_01910953.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
 gi|149816630|gb|EDM76124.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
          Length = 316

 Score =  272 bits (695), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 137/303 (45%), Positives = 188/303 (62%), Gaps = 3/303 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I+  +P+DPI RQ +P   EL  LP ER DPIGD  HSP+  + HRYP R LL   +VC 
Sbjct: 9   IDWQDPDDPIRRQAVPSPLELESLPGERPDPIGDAAHSPVPRLTHRYPTRALLYPTYVCS 68

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           +YCR CFR+E +  +     S    E ALAY+ E +++ EVI TGGDPL LS  +L+ + 
Sbjct: 69  MYCRHCFRKESINDEAAG-FSMAALEPALAYLAEHTELREVILTGGDPLTLSDVQLEALR 127

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIA 225
             L  I+H+ +LR H+RVP+  P R+ P L+  L+  G + V +  H NHP E  ++A+ 
Sbjct: 128 SRLDAIEHLSLLRVHTRVPVTLPTRVTPGLVAALRGDGSRMVCVVTHFNHPRELDDDALT 187

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFR 284
           A  RL  AG +LL+QSVLL+G+ND+ E+LA L    V     KPYYLHH DL  G SHFR
Sbjct: 188 ACRRLREAGFMLLNQSVLLRGVNDEVEVLAELFEKLVYRAGAKPYYLHHCDLTRGVSHFR 247

Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            +I+ G++++A+L+ +ISGLC P Y+LDLPGG GKV I    +       +C +     +
Sbjct: 248 TSIDRGRELMAALRGRISGLCLPEYVLDLPGGDGKVPIGPSFVHARDGQRWCFSTWAGGL 307

Query: 345 HDY 347
           H Y
Sbjct: 308 HHY 310


>gi|160879786|ref|YP_001558754.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           phytofermentans ISDg]
 gi|160428452|gb|ABX42015.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           phytofermentans ISDg]
          Length = 393

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 137/347 (39%), Positives = 221/347 (63%), Gaps = 3/347 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q R++  T A+   + +L ++E+  EI +    + +A+TP  A+L++P + N PI  Q +
Sbjct: 22  QFRNRITTVAELTESIDLTEQEK-QEITQCLGKFRMAITPYYASLMDPTDRNCPIRMQAV 80

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  ILP E  DP+ +   SP+ GIVHRYPDR+L  + H C +YCR C RR +VG +
Sbjct: 81  PSNLENRILPCEMADPLNEEGESPVPGIVHRYPDRVLFLVTHQCSMYCRHCTRRRLVG-E 139

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +  V+S K+ + A+ YI+ K +I +V+ +GGDPL +S ++L+ +LK LR I+HV+I+R  
Sbjct: 140 EDMVISDKEIDTAVEYIRSKEEIRDVLISGGDPLTMSDEKLEHILKKLRSIEHVEIIRIG 199

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +RVP+V P RI  EL   L+   +P++I  H NHP E +++++ A +RL +AGI L +QS
Sbjct: 200 TRVPVVLPMRITLELTNMLRNY-EPIWINTHFNHPKEITKDSMDACARLVDAGIPLGNQS 258

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+GIND  +I+ +L+   V+ RI+PYYL+  DL+ G  HFR  +E G +++  L+  I
Sbjct: 259 VLLRGINDSTDIMKDLLLKLVKNRIRPYYLYQCDLSQGLGHFRTRVETGIEMIHHLQGYI 318

Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           SG   P +++D PGG GK+ ++   I  + +    + ++   ++ YP
Sbjct: 319 SGYAIPKFVIDAPGGGGKIPVNPEYIISIDDNEVVMRNYKGDLYTYP 365


>gi|322419288|ref|YP_004198511.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18]
 gi|320125675|gb|ADW13235.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18]
          Length = 343

 Score =  271 bits (693), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 138/329 (41%), Positives = 208/329 (63%), Gaps = 12/329 (3%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + +TS ++L  + L + +  D +  +   Y + +TP    LI    P DPI RQ +P  E
Sbjct: 10  RCITSPEEL--SGLFRSQGAD-LTCVVRRYPMRITPYYLGLIR--EPGDPIWRQCVPDPE 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           ELN + +   DP+ +   SP+ G++HRYPDR++  +   C VYCRFC R+  VG Q    
Sbjct: 65  ELNDVTQS-PDPLDEERLSPVPGLIHRYPDRVVFLVSTACAVYCRFCMRKRGVGCQG--- 120

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           +S    + ++AYI  K QI +VI +GGDPL+LS  RL  +L  LR I HV+I+R  +RVP
Sbjct: 121 MSPAPVDQSVAYIASKPQIRDVILSGGDPLLLSDDRLDGILTALRRIPHVEIIRIGTRVP 180

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +  P+RI  +L + LK   +P+Y+  H NHP E +E++  A +RLA+AGI L +QSVLLK
Sbjct: 181 VTLPERITVKLARLLKRH-QPLYLNTHFNHPREITEQSARACARLADAGIQLGNQSVLLK 239

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP+++  LM+  + +R++PYY+H  DL  GT+HFR  + +G  ++A+L+   SGL 
Sbjct: 240 GVNDDPQVMRELMQRLLAIRVRPYYIHQMDLVQGTAHFRTRVADGVAVMAALRGHTSGLA 299

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
            P Y++DLPGG GKV++ +      G+GS
Sbjct: 300 VPHYVIDLPGGKGKVEVTSARFS--GDGS 326


>gi|225163783|ref|ZP_03726082.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2]
 gi|224801613|gb|EEG19910.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2]
          Length = 391

 Score =  268 bits (686), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 134/352 (38%), Positives = 214/352 (60%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLR++ LT  +DL     +  ++   +    N  S+A+TP   NLI+  NP DP+  Q 
Sbjct: 30  WQLRNR-LTRLEDLERYMTLTPDERAGVLFAGNKLSLAITPYFFNLIDRDNPADPLRLQV 88

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+  E  +  EE  D +G++ HSP+ G+VHRYPDR+L  +   C  YCR+C R  +V +
Sbjct: 89  IPRAGESQLHAEEMLDSLGEDEHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +       + E  L YI+  S++ +V+ +GGDPL+LS ++L  +L  LR I HV+ +R 
Sbjct: 149 AQDYNFHP-EYEQGLRYIESHSEVRDVLLSGGDPLLLSDRKLDHLLGRLRAIPHVEFIRI 207

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR+P+  PQRI PEL +  K+ G P++++IH NHP+E +EE  AA  RL+ AG+ L +Q
Sbjct: 208 GSRIPVFMPQRITPELCEVFKKHG-PIWMSIHVNHPHECTEELRAACERLSYAGVPLGNQ 266

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+NDDP+ +  L+   + +R++PYYL+  DL  G SHF++ +  G +I+ +L+  
Sbjct: 267 SVLLRGVNDDPDTMRALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRRGLEIIKNLRGH 326

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            +G   P Y++D PGG GKV ++   ++K+ +      ++    + YP  S+
Sbjct: 327 TTGYAIPQYVIDAPGGGGKVPMNPDYVEKITDDEVIFRNYEGHTYRYPLTST 378


>gi|218508047|ref|ZP_03505925.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Brasil 5]
          Length = 198

 Score =  264 bits (675), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 117/198 (59%), Positives = 157/198 (79%)

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+LS +RL+++++ L  I HV+I+RFH+RVP+VDP++I+  LI  LK +GK VY+A+HA
Sbjct: 1   PLVLSPRRLREIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHA 60

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHH
Sbjct: 61  NHPRELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHH 120

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
           PDLA GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK  I    I+  G+G
Sbjct: 121 PDLAPGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVISESVIRATGDG 180

Query: 334 SYCITDHHNIVHDYPPKS 351
            Y ++D+    H YPP  
Sbjct: 181 CYSVSDYRGGEHSYPPAG 198


>gi|239617353|ref|YP_002940675.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
           19.5.1]
 gi|239506184|gb|ACR79671.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
           19.5.1]
          Length = 426

 Score =  261 bits (667), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 132/347 (38%), Positives = 211/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ +T+ + L     I KE+ + IK       +A+TP  A L++P NP  PI RQ 
Sbjct: 23  WQVRNR-ITTVEQLKQVINITKEEEEGIKNCLKTLRMAITPYYATLMDPDNPKCPIRRQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P ++EL +   +  DP+ ++  SP+ G+ HRYPDR+LL +   C +YCR C RR   G 
Sbjct: 82  VPTEKELIVDRWDMLDPLHEDEDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q     + ++ + A+ YI+E  Q+ +V+ +GGD L++    L+ +LK LR I HV+I+R 
Sbjct: 141 QLDKPRTKREIDKAIEYIRETPQVRDVLLSGGDALLVDDSVLEYILKELRKIPHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL++ LK+   P+++  H NHP E + E+  A   LANAGI L +Q
Sbjct: 201 GSRTPVVLPQRITPELVKMLKKY-HPIWLNTHFNHPKEITPESAKACETLANAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND P I+  L+   V++R++PYY++  DL+ G  HFR +I +G  I+ SL   
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIAIMESLIGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P +++D PGG GK+++    +    + +  + ++  ++  Y
Sbjct: 320 TSGFCVPTFVVDAPGGGGKIRVMPQYVVSQSDRTVVLRNYEGVITTY 366


>gi|313886286|ref|ZP_07820012.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332299776|ref|YP_004441697.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707]
 gi|312924231|gb|EFR35014.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332176839|gb|AEE12529.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707]
          Length = 421

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 123/300 (41%), Positives = 197/300 (65%), Gaps = 2/300 (0%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           E+ + ++E      +A+TP   +LI+P++PNDP+ +Q IP   EL++ PE++ DP+ ++ 
Sbjct: 44  EEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQSIPTINELHVSPEDQLDPLSEDE 103

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
            SP+ G+ HRYPDR+L  +  +C +YCR C RR   G QK      +  E  + YI++  
Sbjct: 104 DSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-QKDAASPKERIEKCIEYIEQTP 162

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           ++ +V+ +GGD L++S K L+ +++ LR I HV+I+R  SR P+V PQRI PEL+Q L +
Sbjct: 163 EVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRIGSRTPVVCPQRITPELVQMLSK 222

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
              P+++  H NHP E + E+  A  R+ANAGI L +QSVLL+GIND P I+ +L+   V
Sbjct: 223 Y-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQSVLLRGINDCPSIMMHLVHELV 281

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           ++R++PYY++  DL+ G SHFR  + +G +I+ +L+   SG   P +++D PGG GK+ +
Sbjct: 282 KMRVRPYYIYVCDLSQGISHFRTPVSKGIEIIEALRGHTSGYAVPTFVVDAPGGGGKIPV 341


>gi|294055535|ref|YP_003549193.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita
           akajimensis DSM 45221]
 gi|293614868|gb|ADE55023.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita
           akajimensis DSM 45221]
          Length = 397

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 126/317 (39%), Positives = 197/317 (62%), Gaps = 2/317 (0%)

Query: 36  SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95
           ++A+TP   NLINP +PNDPI RQ IP+  E  I P+E  DP+G+    P+ GIVHRYPD
Sbjct: 64  ALAITPYFFNLINPKDPNDPIRRQVIPRAAESQIAPDEMLDPVGEEGTKPVDGIVHRYPD 123

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R+L  +   C  YCR+C R  +V + +       + E+ L YI++ S+I +V+ +GGDPL
Sbjct: 124 RVLFLVTDRCAAYCRYCTRSRLVSNAQDYNFHP-EFESGLEYIRQHSEIRDVLLSGGDPL 182

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
           +LS K+L  +L  LR I HV+ +R  SR+P+  PQRI P+L    ++ G P++++IH NH
Sbjct: 183 LLSDKKLDYLLGELRKIPHVEFIRIGSRIPVFLPQRITPQLCDIFRKHG-PIWLSIHVNH 241

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
           P E S E  AA  RL+ AG+ + +QSVLLKG+N+D  ++ +L+   + +R++PYYL+  D
Sbjct: 242 PSECSLELKAACERLSYAGVPIGNQSVLLKGVNNDAGVMKSLIHRLLMMRVRPYYLYQCD 301

Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
           L  G++H R    EG +I+  L+   SG   P +++D PGG GK+ ++   ++ +   + 
Sbjct: 302 LITGSAHLRTDPREGIEIIRQLRGHTSGYSIPQFVIDAPGGGGKIPLNPDYVEDISETTL 361

Query: 336 CITDHHNIVHDYPPKSS 352
            + +     ++YP K  
Sbjct: 362 ILRNFQGERYEYPLKCG 378


>gi|182413733|ref|YP_001818799.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1]
 gi|177840947|gb|ACB75199.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1]
          Length = 403

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 132/352 (37%), Positives = 214/352 (60%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ LTS  +L     +  E+       ++  S+A+TP   NLI+  +PN PI +Q 
Sbjct: 30  WQLKNR-LTSVAELERYMTLTPEEKAGCLFANHKLSLAITPYFFNLIDREDPNCPIRKQV 88

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+  E+ +  EE+ D +G++ HSP+ G+VHRYPDR+L  +   C  YCR+C R  +V +
Sbjct: 89  IPRAGEMQVSAEEQLDSLGEDAHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +       + E  L YI+   ++ +V+ +GGDPL+LS ++L+ ++  LR I HV+ +R 
Sbjct: 149 AQDYNFHP-EYEQGLRYIEAHPEVRDVLLSGGDPLLLSDRKLEHLISRLRAIPHVEFIRI 207

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR+P+  PQRI PEL +  K+ G P++++IH NHP E + E   A  RL+ AG+ L +Q
Sbjct: 208 GSRIPVFLPQRITPELCEVFKKHG-PIWMSIHVNHPKEATAELKQACDRLSFAGVPLGNQ 266

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKG+NDD E++  L+   + +R++PYYL+  DL  G SHF++ + +G +I+ +L+  
Sbjct: 267 SVLLKGVNDDAEVMKALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRKGIEIIQALRGH 326

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            +G   P Y++D PGG GKV I+   ++K+ +      +       YP KS+
Sbjct: 327 TTGYAIPQYVIDAPGGGGKVPINPDYLEKITDEEVVFRNFEGRRFTYPLKST 378


>gi|77920113|ref|YP_357928.1| hypothetical protein Pcar_2520 [Pelobacter carbinolicus DSM 2380]
 gi|77546196|gb|ABA89758.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
          Length = 347

 Score =  259 bits (663), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 196/321 (61%), Gaps = 7/321 (2%)

Query: 25  IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILP-EEREDPIGDNNH 83
           + E+  +   Y + +TP   +LI    P D I RQ +P + EL  LP +E  DP+ +   
Sbjct: 26  MSELDAVVQRYPMRITPYYLDLIE--KPGDAIWRQCVPDRREL--LPCQEDADPLAEERL 81

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           SP+  +VHRYPDR+LL     C VYCRFC R+  VG     V S +  + A+ Y+    Q
Sbjct: 82  SPVPLLVHRYPDRVLLLASGQCAVYCRFCTRKRKVGCAAMGV-SDRHLDEAIDYVARTEQ 140

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           + +VI +GGDPL+L   RL+ +L  LR I HV+I+R  SRVP+  PQRI  EL   L+  
Sbjct: 141 VRDVILSGGDPLLLEDDRLEHLLMRLRAIPHVEIIRIGSRVPVTLPQRITEELCAMLRRY 200

Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
             P+Y+  H NHP E + +A  A  RLA+AG+ L +Q+VLL+G+ND P ++  L++  ++
Sbjct: 201 -HPLYLNTHFNHPRELTPQAFEACRRLADAGLPLGNQTVLLRGVNDTPAVMRQLVKGLLK 259

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +R++PYYLHH DLAAGT HFR  IE G  IVA+L+  ISGL  P Y++D PGG GK+ + 
Sbjct: 260 MRVRPYYLHHMDLAAGTGHFRTRIETGLDIVAALRGPISGLAVPHYVIDSPGGKGKIPLL 319

Query: 324 THNIKKVGNGSYCITDHHNIV 344
              + K+G+ +   T    ++
Sbjct: 320 PEYLVKLGDTALLRTPSGEMI 340


>gi|228469409|ref|ZP_04054423.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3]
 gi|228309093|gb|EEK17723.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3]
          Length = 421

 Score =  259 bits (663), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 123/300 (41%), Positives = 196/300 (65%), Gaps = 2/300 (0%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           E+ + ++E      +A+TP   +LI+P++PNDP+ +Q IP   EL++ PE++ DP+ ++ 
Sbjct: 44  EEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQSIPTINELHVSPEDQLDPLSEDE 103

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
            SP+ G+ HRYPDR+L  +  +C +YCR C RR   G QK      +  E  + YI++  
Sbjct: 104 DSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-QKDAASPKERIEKCIEYIEQTP 162

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           ++ +V+ +GGD L++S K L+ +++ LR I HV+I+R  SR P+V PQRI PEL+Q L +
Sbjct: 163 EVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRIGSRTPVVCPQRITPELVQMLSK 222

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
              P+++  H NHP E + E+  A  R+ANAGI L +QSVLL+GIND P I+ +L+   V
Sbjct: 223 Y-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQSVLLRGINDCPSIMKHLVHELV 281

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           ++R++PYY++  DL+ G SHFR  + +G +I+ +L+   SG   P +++D PGG GK  +
Sbjct: 282 KMRVRPYYIYVCDLSRGISHFRTPVSKGIEIIEALRGHTSGYAVPTFVVDAPGGGGKTPV 341


>gi|189218034|ref|YP_001938676.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4]
 gi|189184892|gb|ACD82077.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4]
          Length = 397

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 138/351 (39%), Positives = 207/351 (58%), Gaps = 8/351 (2%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++  +  Q      LI  E+   +       + +LTP   NLI+P NP+ P+ RQ 
Sbjct: 29  WQLKNRLNSLEQIEQRLFLIPDERRGLMFAAKEKLAFSLTPYFFNLIDPFNPDCPLRRQV 88

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-- 118
           IP+ EEL  +P E  DP G++      G+VHRYPDR+L  +   C  YCR+C R  +V  
Sbjct: 89  IPRAEELVSMPYEMMDPCGEDKDMVAPGLVHRYPDRVLFLVTDRCATYCRYCTRSRIVSG 148

Query: 119 -GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
            GSQK  +    D +    Y+++ ++I +V+ +GGDPL+LS  RL+K+L+ LR I H++I
Sbjct: 149 VGSQKLEI----DDKLTFDYLKKHTEIRDVLISGGDPLLLSDGRLEKILRQLREIAHIEI 204

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +RVPI  PQRI   L + LK A  P++I IH+NHP E + EA  A+ +LA+ GI L
Sbjct: 205 IRIGTRVPIFLPQRITESLCKVLK-AYHPLWINIHSNHPKELTLEAKTALEKLADTGIPL 263

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLLKGINDDP+ +  L+   V  R++PYYL+  DL  GT HFR+ I  G +I+  L
Sbjct: 264 GNQSVLLKGINDDPQTMLELVNKLVRCRVRPYYLYQCDLIQGTHHFRVPIRRGLEIMQKL 323

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           +   +G   P Y++D PGG GK+ ++   +         + ++   ++ YP
Sbjct: 324 RGFTTGFAVPQYVVDGPGGGGKIPLNPDYVMGYYEDKVLLRNYEGKIYSYP 374


>gi|218516316|ref|ZP_03513156.1| L-lysine 2,3-aminomutase protein [Rhizobium etli 8C-3]
          Length = 195

 Score =  258 bits (660), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 115/195 (58%), Positives = 153/195 (78%)

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           LS +RL+ +++ L  I HV+I+RFH+RVP+VDP++I+  LI  LK +GK VY+A+HANHP
Sbjct: 1   LSPRRLRDIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHANHP 60

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHHPDL
Sbjct: 61  RELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHHPDL 120

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
           A GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK  I    I+  G+G Y 
Sbjct: 121 APGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVIGESVIRATGDGCYS 180

Query: 337 ITDHHNIVHDYPPKS 351
           ++D+    H YPP  
Sbjct: 181 VSDYRGGEHSYPPAG 195


>gi|157363352|ref|YP_001470119.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae
           TMO]
 gi|157313956|gb|ABV33055.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae
           TMO]
          Length = 419

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 134/347 (38%), Positives = 213/347 (61%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLR++ +         NL  +E+ + ++       +A+TP  A L++P NP  PI  Q 
Sbjct: 23  WQLRNRIMNLDVLQEVVNLTDQER-EGVRHSLKFLRMAITPYYATLMDPENPRCPIRMQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +ELNI  EE  DP+ ++  SP+KG+ HRYPDR+LL +   C +YCR C RR   G 
Sbjct: 82  IPTAKELNISQEEMIDPLHEDVDSPVKGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  + LS +   +A+ YI++  +I +V+ +GGDPL LS ++L+ ++  +R I+HV+I+R 
Sbjct: 141 ETDSPLSDELLNSAIDYIKQNKRIRDVLLSGGDPLTLSTEKLENIISRIREIEHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+V P RI  EL   LK+   P+++  H NHP E + ++  A+S LA+AGI L +Q
Sbjct: 201 GTRVPVVLPMRITEELTSMLKKY-HPIWLNTHFNHPKEITPQSRRALSMLADAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND P+I+  L+   V+ R++PYY++  DL+ G SHFR T+ +G +I+  L+  
Sbjct: 260 SVLLRGINDCPQIMKKLVHELVKNRVRPYYIYQCDLSRGLSHFRTTVAKGIEIIEYLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P Y++D PGG GK+ ++   +  +G G   + ++   +  Y
Sbjct: 320 TSGFAVPTYVIDAPGGGGKIPVEPQYLISMGEGKVVLRNYEGGIFVY 366


>gi|171912149|ref|ZP_02927619.1| Lysine 2,3-aminomutase [Verrucomicrobium spinosum DSM 4136]
          Length = 406

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 196/317 (61%), Gaps = 2/317 (0%)

Query: 32  SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
            N  ++A+TP   NLI+P +P+ PI RQ IP+ EE    P+E  DP G+++H P+ G+VH
Sbjct: 64  GNKLAMAITPHFFNLIHPTDPDCPIRRQVIPRIEETWDDPDEMSDPCGEDSHMPVPGLVH 123

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           RYPDR+L  +   C  YCR+C R  +V       L + + EA   Y++  +++ +V+ +G
Sbjct: 124 RYPDRVLFLVTDRCASYCRYCTRSRVVSGVGDQELHT-EFEAVFKYLEAHTEVRDVLLSG 182

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           GD L+ S  +L+ +LK LR I H++ LR  SRVPI  PQRI PEL   L +   P+++++
Sbjct: 183 GDALLFSDAKLEGILKRLRAIPHIEFLRIGSRVPIFLPQRITPELCTMLAKY-HPLWMSV 241

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
           H NHP E + E   A+ RLAN GI L +QSVLL+G+NDDPE++  L+   +  R++PYYL
Sbjct: 242 HTNHPREITIEVKEALERLANHGIPLGNQSVLLRGVNDDPEVMKALVHKLLMSRVRPYYL 301

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331
           +  DL  G+SH R ++ +G +I+ SL+   +G   P +++D PGG GKV ++   +    
Sbjct: 302 YQCDLIQGSSHLRTSVSKGLEIIESLRGHTTGYGVPQFVIDAPGGGGKVPVNPEYVLAKD 361

Query: 332 NGSYCITDHHNIVHDYP 348
           +    I ++   V DYP
Sbjct: 362 SHHTLIRNYEGKVFDYP 378


>gi|284097493|ref|ZP_06385581.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3]
 gi|283830995|gb|EFC35017.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3]
          Length = 340

 Score =  257 bits (656), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 129/299 (43%), Positives = 186/299 (62%), Gaps = 7/299 (2%)

Query: 24  QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
            ++E++ I   + I + P   +LI    P DPI +Q +P   EL  +    EDP+ + + 
Sbjct: 25  DLEEMQRIHKEFPIRINPYYLSLIK--EPGDPIWKQVVPDPREL--MSTGVEDPLHEEDD 80

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           S +  + HRYPDR L  + ++CP+YCRFC R+  VG      +S  + E  LAYIQ   +
Sbjct: 81  SEVPNVTHRYPDRALFYVNYMCPIYCRFCTRKRKVGDPHS--ISEDNIETGLAYIQAHPE 138

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I +VI +GGDPL+L+ K++  ++  LR IKH++I+R  SRVP+  PQRI PEL   LK  
Sbjct: 139 IRDVIISGGDPLMLTDKKIDMIVGGLRAIKHLEIIRIGSRVPVTLPQRITPELCAILKRH 198

Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
             P YI  H NHP E + E   A   LA+AGI L +Q+VLLKG+NDDP+++  LM+  + 
Sbjct: 199 -HPFYINTHFNHPREITPETEKACGMLADAGIPLGNQAVLLKGVNDDPDVMVELMKGLLR 257

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           +R+KPYY++  DL  GT HFR  ++ G  IVA+L+  ISGL  P Y++D PGG GK+ +
Sbjct: 258 IRVKPYYIYQADLVVGTDHFRTAVQTGLDIVAALRGHISGLGVPHYVVDAPGGGGKIAL 316


>gi|301058169|ref|ZP_07199221.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2]
 gi|300447801|gb|EFK11514.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2]
          Length = 354

 Score =  257 bits (656), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 132/323 (40%), Positives = 197/323 (60%), Gaps = 6/323 (1%)

Query: 26  DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
           +++K + + Y + + P    LI     NDPI RQ +P   EL+       DP+ +  HSP
Sbjct: 33  EKLKRVISRYPMRINPYYLGLIR--EKNDPIYRQSMPDIRELDD-KGAAPDPLNEEGHSP 89

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           ++G+ HRYPDR+LL +   C VYCRFC R+  VG  +  +++ +  E  + YI+   ++ 
Sbjct: 90  VRGLTHRYPDRVLLLVSSECAVYCRFCNRKRKVG--RPGMVTDRSIEEGIDYIRAHREVR 147

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +V+ +GGDPL+L   RL ++L  L  I HV+I+R  +RVP   PQRI PEL   L++   
Sbjct: 148 DVLLSGGDPLLLEDARLGEILSALHAISHVEIIRIGTRVPCTLPQRITPELAGLLQKF-H 206

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           P+Y+ +H NHP E + EA  A +RLA+AGI L  Q+VLLKG+NDDP ++  LMR  + +R
Sbjct: 207 PLYMNVHFNHPLEITAEATLACNRLADAGIPLGCQTVLLKGVNDDPSVMQELMRKLLIIR 266

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           +KPYYL H D A GTSHFR ++  G  I+  L+   SGLC P + +DL GG GKV +   
Sbjct: 267 VKPYYLFHGDPARGTSHFRTSVSRGLNIIRELQGHTSGLCVPHFAIDLLGGGGKVPLLPD 326

Query: 326 NIKKVGNGSYCITDHHNIVHDYP 348
            ++   +GS  +T++    + +P
Sbjct: 327 YLQGREDGSLLVTNYRGNAYRHP 349


>gi|254445491|ref|ZP_05058967.1| KamA family protein [Verrucomicrobiae bacterium DG1235]
 gi|198259799|gb|EDY84107.1| KamA family protein [Verrucomicrobiae bacterium DG1235]
          Length = 398

 Score =  257 bits (656), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 130/351 (37%), Positives = 213/351 (60%), Gaps = 3/351 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++  T  Q   +  L  +E+       +   ++A+TP   NLI+  +PN PI +Q 
Sbjct: 30  WQLKNRITTLEQLEQHMELTPEERAG-CAHANTKLAMAITPYFFNLIDREDPNCPIRKQV 88

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+++E+ +  EE  DP+G++ HSP+ G+VHRYPDR+L  +   C  YCR+C R  +V +
Sbjct: 89  IPREDEMTVGQEEMLDPVGEDGHSPVPGLVHRYPDRVLFLVTDRCAAYCRYCTRSRLVSN 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +       + E  L YI+E  ++ +V+ +GGDPL+LS K+L  +L  LR I+HV+ +R 
Sbjct: 149 AQDYNFHP-EFEQGLKYIEEHPEVRDVLLSGGDPLLLSDKKLDYLLGRLRAIEHVEFIRI 207

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR+P+  PQRI PEL +  K+ G P++++IH NHP E ++    A  RL+ AG+ L +Q
Sbjct: 208 GSRIPVFLPQRITPELCEIFKKHG-PIWMSIHTNHPKECTQTLKDACERLSFAGVPLGNQ 266

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLK +NDD E++  L+   V +R++PYY++  DL  G++H R  + +G +I+  L+  
Sbjct: 267 SVLLKDVNDDLEVMKALVHRLVRMRVRPYYIYQCDLITGSAHLRANVCKGIEIMKGLRGH 326

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
            +G   P +++D PGG GKV I+   I K+ + +    +    ++ YP K+
Sbjct: 327 TTGYSVPQFVIDAPGGGGKVPINPQYITKIDDEAIHFKNFEGKLYRYPLKT 377


>gi|150020100|ref|YP_001305454.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
           melanesiensis BI429]
 gi|149792621|gb|ABR30069.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
           melanesiensis BI429]
          Length = 423

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 132/347 (38%), Positives = 209/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ +T+   L     + KE+ + I++      +A+TP  A+L++P NP  PI RQ 
Sbjct: 23  WQIRNR-ITNVDTLKKVINLTKEEEEGIRQSLKTLRMAITPYYASLMDPDNPKCPIRRQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +EL + P +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   G 
Sbjct: 82  VPTVKELEVKPWDMIDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAGQ 141

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T   S + +AA+ YI+E  Q+ +V+ +GGD L+     L+ +LK LR IKHV+I+R 
Sbjct: 142 HDRTRTKS-EIDAAIDYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQ +  EL   LK+   P++I +  NHP E + E+  A   LA+AGI L +Q
Sbjct: 201 GTRAPVVIPQIVTKELTNMLKKY-HPIWINMQFNHPKEITSESSKACEMLADAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND P I+  L+   V++R++PYY++  DL+ G SHFR +I  G KI+ SL   
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGISHFRTSIGTGLKIMESLIGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P Y++D P G GK+++    +    N +  + ++  ++  Y
Sbjct: 320 TSGFCVPTYVVDAPAGGGKIRLMPQYLISYSNNTAILRNYEGVIVAY 366


>gi|310658686|ref|YP_003936407.1| l-lysine 2,3-aminomutase [Clostridium sticklandii DSM 519]
 gi|308825464|emb|CBH21502.1| l-lysine 2,3-aminomutase [Clostridium sticklandii]
          Length = 414

 Score =  256 bits (653), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 130/344 (37%), Positives = 211/344 (61%), Gaps = 12/344 (3%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + + ++L     +  E+ + +K   +   +A+TP   +LI+  NPNDP+ +Q 
Sbjct: 21  WQVRNR-IETVEELKKYIPLTPEEEEGVKRCLDTLRMAITPYYLSLIDVENPNDPVRKQA 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL+    ++EDP+ ++  SP+ G+ HRYPDR+LL +   C +YCR C RR   G 
Sbjct: 80  VPLSLELHRAASDQEDPLHEDGDSPVPGLTHRYPDRVLLLMTDQCSMYCRHCTRRRFAG- 138

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q  + + +K  +AA+ YI+   Q+ +V+ +GGD L++S ++L+  +K LR I HV+++R 
Sbjct: 139 QTDSAVDTKQIDAAIEYIKNTPQVRDVLLSGGDALLISDEKLEYTIKRLREIPHVEVIRI 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SRVP+V PQRI PEL+  LK+   PV++  H NHP E +EE+  A   LA+AGI L +Q
Sbjct: 199 GSRVPVVMPQRITPELVSMLKKY-HPVWLNTHFNHPNEITEESKRACELLADAGIPLGNQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL G+ND   ++  L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 258 SVLLAGVNDCMHVMKKLVNDLVKIRVRPYYIYQCDLSVGIEHFRTPVAKGIEIIEGLRGH 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            SG C P +++D PGG GK  +           +Y I+ +HN V
Sbjct: 318 TSGYCVPTFVVDAPGGGGKTPV---------MPNYVISQNHNKV 352


>gi|251773208|gb|EES53760.1| Lysine 2,3-aminomutase [Leptospirillum ferrodiazotrophum]
          Length = 411

 Score =  255 bits (651), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 134/352 (38%), Positives = 216/352 (61%), Gaps = 14/352 (3%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           +RH      + +  AN +  E+++ +      Y I +     +LI+  +P DPI  Q IP
Sbjct: 12  IRHGADLPPEWVIEANGVGPEKVEGL------YPIRINDYYRSLIS--DPQDPIGLQVIP 63

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E  +  +  EDP+G++  SP+  IVHRYPDR+L  + + CP+YCR+C R+ +VG  +
Sbjct: 64  DPAEW-MDADSPEDPLGEDADSPVPAIVHRYPDRVLFLVTNQCPIYCRYCTRKRLVGKPE 122

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G V+S ++    + YI+E  ++ +VI +GGDPL+L  + L+++L  LR I+H++I+R  +
Sbjct: 123 G-VVSREEIRQGIDYIREHPEVRDVILSGGDPLMLKDEVLEEILTGLRSIEHLEIIRIGT 181

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           RVP   PQR+ PEL + L     P+Y+ +H NHP E + E+  A   LA+AGI L  Q+V
Sbjct: 182 RVPSALPQRVTPELCRMLSRF-HPLYMNLHFNHPREITPESSEACRLLADAGIPLGCQTV 240

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           L+KGINDD E+L  L +  +++R+KPYYL+  DL  G +HFR  +E+G  I+ +L+  IS
Sbjct: 241 LMKGINDDAEVLGTLFKGLLKIRVKPYYLYQADLTRGANHFRTPVEKGISIMKALQGNIS 300

Query: 303 GLCQPFYILDLPGGYGKVKI--DTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           G+  P +++D PGG GK+ +  D + + +  NG   + ++ N ++ YP  SS
Sbjct: 301 GMAIPHFVIDAPGGGGKIPVLADDYLLGRE-NGQVLLKNYENKIYSYPDVSS 351


>gi|326391509|ref|ZP_08213042.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325992438|gb|EGD50897.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 423

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 127/347 (36%), Positives = 212/347 (61%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + + ++L     + +E+ + I +      +A+TP   +LI+P++PNDPI ++ 
Sbjct: 29  WQIRNR-IETVEELKKYLPLTQEEEEAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRA 87

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL    E+  DP+ ++  SP+ G+ HRYPDR+LL +   C +YCR C RR   G 
Sbjct: 88  VPTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 146

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q    L     E A+ YI +  QI +V+ +GGDPL LS  RL++++K LR I HV+I+R 
Sbjct: 147 QTDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRI 206

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            S  P+V PQRI PEL+  LK+   P+++  H NHP+E +E++  A   LA+AGI L +Q
Sbjct: 207 GSSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQ 265

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+ND   ++  L+   V++R++PYY++  DL+ G SHFR  + +G +I+ +L+  
Sbjct: 266 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGH 325

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P +++D PGG GK+ +  + +    +    + ++  ++  Y
Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTY 372


>gi|34540806|ref|NP_905285.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83]
 gi|188995030|ref|YP_001929282.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277]
 gi|34397120|gb|AAQ66184.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83]
 gi|188594710|dbj|BAG33685.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277]
          Length = 416

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 125/303 (41%), Positives = 192/303 (63%), Gaps = 2/303 (0%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           +  E+ + +KE      +A+TP   +LI+P NPN PI +Q IP  +EL   PE++ DP+ 
Sbjct: 41  LTAEEEEGVKESLKVLRMAITPYYLSLIDPENPNCPIRKQAIPTHQELVRAPEDQVDPLS 100

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           ++  SP+ G+ HRYPDR+L  +   C +YCR C RR   G QK     S+  +  + YI 
Sbjct: 101 EDEDSPVPGLTHRYPDRVLFLITDKCSMYCRHCTRRRFAG-QKDASSPSERIDRCIDYIA 159

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
               + +V+ +GGD L++S +RL+ +LK LR I HV+I+R  SR P+V PQRI P+L+  
Sbjct: 160 NTPTVRDVLLSGGDALLVSDERLEYILKRLREIPHVEIVRIGSRTPVVLPQRITPQLVDM 219

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           LK+   PV++  H NHP E +EEA+ A  R+ANAGI L +Q+VLL+GIND   ++  L+ 
Sbjct: 220 LKKY-HPVWLNTHFNHPNEVTEEAVEACERMANAGIPLGNQTVLLRGINDCTHVMKRLVH 278

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             V++R++PYY++  DL+ G  HFR  + +G +I+ +L+   SG   P +++D PGG GK
Sbjct: 279 LLVKMRVRPYYIYVCDLSLGIGHFRTPVSKGIEIIENLRGHTSGYAVPTFVVDAPGGGGK 338

Query: 320 VKI 322
           + +
Sbjct: 339 IPV 341


>gi|307265361|ref|ZP_07546918.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306919645|gb|EFN49862.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 423

 Score =  253 bits (647), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 127/347 (36%), Positives = 211/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + + ++L     + +E+   I +      +A+TP   +LI+P++PNDPI ++ 
Sbjct: 29  WQIRNR-IETVEELKKYLPLTQEEEQAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRA 87

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL    E+  DP+ ++  SP+ G+ HRYPDR+LL +   C +YCR C RR   G 
Sbjct: 88  VPTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFSG- 146

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q    L     E A+ YI +  QI +V+ +GGDPL LS  RL++++K LR I HV+I+R 
Sbjct: 147 QTDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRI 206

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            S  P+V PQRI PEL+  LK+   P+++  H NHP+E +E++  A   LA+AGI L +Q
Sbjct: 207 GSSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQ 265

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+ND   ++  L+   V++R++PYY++  DL+ G SHFR  + +G +I+ +L+  
Sbjct: 266 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGH 325

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P +++D PGG GK+ +  + +    +    + ++  ++  Y
Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTY 372


>gi|302341654|ref|YP_003806183.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii
           DSM 2075]
 gi|301638267|gb|ADK83589.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii
           DSM 2075]
          Length = 430

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 129/348 (37%), Positives = 204/348 (58%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ LT+ Q L     + +E+    + ++    +A+TP   +LI+  NP DP+ R  
Sbjct: 75  WQVRNR-LTNPQALERFFPLAQEERRAFEAVAGRLPMAITPYYLSLIDRQNPADPLRRAV 133

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E  + P E  DP+ ++      G+VHRYPDR+LL     C  YCR+C R  +VG 
Sbjct: 134 VPTWMEAVVSPGESHDPLAEDADMAAPGLVHRYPDRVLLLATGFCSTYCRYCTRSRLVGG 193

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             G     +  E ALAYI+    + +V+ +GGDPL ++  RL+ +L  LR ++HV+I+R 
Sbjct: 194 -GGMHTGKRALERALAYIEATPAVRDVLISGGDPLTMADDRLEWLLSRLRAMRHVEIIRI 252

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            S+VP V PQR+ P L + LK+   P++I++H  HP E + EA  A +RLA+AG+ L SQ
Sbjct: 253 GSKVPAVLPQRVTPALTRMLKKY-HPLFISLHFMHPAELTVEAAKACARLADAGVPLGSQ 311

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL GINDD   +  LM+  + LR++PYYL+  D   G++HFR  + +G +IVA L+  
Sbjct: 312 TVLLAGINDDVATMRALMQGLLRLRVRPYYLYQCDPICGSAHFRTPVAKGLEIVAGLRGH 371

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            +G   P Y++D PGG GKV +   ++    + +  + ++    + YP
Sbjct: 372 TTGYAVPTYVIDAPGGGGKVALYPESVIGRQDEALLLRNYEGGQYAYP 419


>gi|217076542|ref|YP_002334258.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B]
 gi|217036395|gb|ACJ74917.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B]
          Length = 423

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 129/322 (40%), Positives = 198/322 (61%), Gaps = 3/322 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ +T    L     +  E+ + I+       +A+TP  A+L++P NP  PI RQ 
Sbjct: 23  WQIRNR-ITDVDTLKQVINLTPEEENGIRNSLKTLRMAITPYYASLMDPDNPKCPIRRQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +EL + P +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   G 
Sbjct: 82  VPTIKELEVKPWDMVDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q     + ++ +AA+ YI+E  Q+ +V+ +GGD L+     L+ +LK LR IKHV+I+R 
Sbjct: 141 QHDRARTKQEIDAAIEYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQ +  EL   LK+   P+++  H NHP E + E+  A   LA+AGI L +Q
Sbjct: 201 GSRAPVVIPQIVTKELTDMLKKY-HPIWLNTHFNHPKEITPESSRACEMLADAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND P I+  L+   V++R++PYYL+  DL+ G SHFR +I  G +I+ SL   
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYLYQCDLSQGISHFRTSIGTGLRIIESLIGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
            SG C P Y++D P G GK+++
Sbjct: 320 TSGFCVPTYVVDAPAGGGKIRL 341


>gi|224368437|ref|YP_002602600.1| KamA2 [Desulfobacterium autotrophicum HRM2]
 gi|223691153|gb|ACN14436.1| KamA2 [Desulfobacterium autotrophicum HRM2]
          Length = 435

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 128/317 (40%), Positives = 200/317 (63%), Gaps = 3/317 (0%)

Query: 37  IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           +++TP   +LI+P++P+ P+ +  +P   E   +  E +DP+G+++ SP+ G+VHRYPDR
Sbjct: 118 LSITPYYLSLISPNDPDQPLRKSVVPTVHEWVKMGCESDDPLGEDHQSPVPGLVHRYPDR 177

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L  LL  C  YCR+C R  +VG   G +      E A+ YI +   I +V+ +GGDPL 
Sbjct: 178 VLFLLLDFCSTYCRYCTRSRVVG-HGGILAGRARWEKAIEYIAKTPTIRDVLLSGGDPLT 236

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           LS  RL+ VL  LR I HV+I+R  ++V  V PQRI P+L++ LK    P+++++H  HP
Sbjct: 237 LSDDRLEWVLSRLRKIPHVEIIRIGTKVTTVLPQRITPKLVKMLKRY-HPLWMSLHFTHP 295

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E + EA  A + LA+AGI L SQ+VLLKGIND+ E +A+LM   +++R++PYYL+  D 
Sbjct: 296 DECTPEAYKACTMLADAGIPLGSQTVLLKGINDNVETMADLMHQLMKMRVRPYYLYQCDP 355

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
             G+ HFR +I++G +I+  L+   SG   P Y++D PGG GK+ +    +K+    +  
Sbjct: 356 ITGSGHFRTSIDKGLEIIHGLRGFTSGYAVPTYVVDAPGGGGKIPLMPDYVKEHTRETLV 415

Query: 337 ITDHHNIVHDYP-PKSS 352
           +T++ +    YP P SS
Sbjct: 416 LTNYEDKTFCYPDPVSS 432


>gi|75423266|sp|Q9XBQ8|KAMA_CLOSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName:
           Full=KAM
 gi|5410603|gb|AAD43134.1|AF159146_1 L-lysine 2,3-aminomutase [Clostridium subterminale]
          Length = 416

 Score =  252 bits (643), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 123/322 (38%), Positives = 201/322 (62%), Gaps = 3/322 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + + ++L     + KE+ + + +      +A+TP   +LI+P++PNDP+ +Q 
Sbjct: 22  WQVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRMAITPYYLSLIDPNDPNDPVRKQA 80

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   ELN    + EDP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   G 
Sbjct: 81  IPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAG- 139

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q    +  +  + A+ YI+   Q+ +V+ +GGD L++S + L+ ++  LR I HV+I+R 
Sbjct: 140 QSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI 199

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL+  LK+   PV++  H NHP E +EE+  A   LA+AG+ L +Q
Sbjct: 200 GSRTPVVLPQRITPELVNMLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQ 258

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND   ++  L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 259 SVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGH 318

Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
            SG C P +++D PGG GK  +
Sbjct: 319 TSGYCVPTFVVDAPGGGGKTPV 340


>gi|260463114|ref|ZP_05811317.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium
           opportunistum WSM2075]
 gi|259031235|gb|EEW32508.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium
           opportunistum WSM2075]
          Length = 366

 Score =  252 bits (643), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 136/305 (44%), Positives = 188/305 (61%), Gaps = 5/305 (1%)

Query: 45  NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
           +LI+ ++P DPI  Q IP  +EL     E  DPI D++ SP+  + HR+ DR+LL   + 
Sbjct: 59  DLIDWNDPADPIRAQVIPSPDELVEAEGELGDPIADHDFSPVPRLTHRHGDRVLLFPTYQ 118

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C VYCRFCFR+E + S  G   + +  E ALAYI + S+I EVI TGGDPL LS K L +
Sbjct: 119 CAVYCRFCFRKESLTS-IGRGYTREALEPALAYIADHSEIREVILTGGDPLSLSDKALAE 177

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEA 223
           +   +  I HV++LR H+RVP+  P RI P L++ L+  G+  V +  H NH  E ++ A
Sbjct: 178 IFMRIEAIPHVRLLRIHTRVPVALPSRITPGLVEALQ--GRLMVTVVTHFNHAREITDAA 235

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSH 282
            AA   +  AG +LL+QSVLLKG+ND  E+L  L R  +  L +KPYYLHH DLA G +H
Sbjct: 236 EAACRTMRQAGFVLLNQSVLLKGVNDSVEVLEELCRELMYRLGVKPYYLHHGDLARGMAH 295

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342
            R TI +GQ +V +L+ ++SG+C P Y+LDLP G GKV +   +I+     S+ I     
Sbjct: 296 RRTTIAQGQALVEALRARLSGICNPVYVLDLPEGGGKVPLGPCSIEGRDGESWRIRGQDG 355

Query: 343 IVHDY 347
            V  Y
Sbjct: 356 AVRGY 360


>gi|78358081|ref|YP_389530.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220486|gb|ABB39835.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 527

 Score =  252 bits (643), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 117/286 (40%), Positives = 179/286 (62%), Gaps = 1/286 (0%)

Query: 37  IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           +A+TP  A   +PHNP  P+ R  +P  EE ++ P E  DP+G+++HSP+ G+VHRYPDR
Sbjct: 190 LAVTPYYAAQFDPHNPAHPLRRTMVPTVEEWSLNPGESADPLGEDSHSPVPGLVHRYPDR 249

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L      C  YCR+C R   VG       S +   AA+ YI+   ++ +V+ +GGDPL 
Sbjct: 250 VLFLATDSCSAYCRYCTRSRRVGKPCAGSASRRRWPAAIEYIENHPEVRDVLISGGDPLT 309

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           ++   L  +L  LR I HV+ +R  ++ PIV PQRI P L++ L+    P++++IH  HP
Sbjct: 310 MTDSALNHLLSQLRRIPHVEFIRIGTKAPIVMPQRITPALVRMLRRY-HPLFMSIHCTHP 368

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E + EA  A++RLA+ GI L SQ+VLLKGIND+   +  LM+  ++ R++PYYL+H D 
Sbjct: 369 DELTPEASQALNRLADGGIPLGSQTVLLKGINDNVPTMTALMQGLLKNRVRPYYLYHCDP 428

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             G++HFR  I +G +I+  ++   +G   P Y++D PGG GK+ +
Sbjct: 429 VQGSAHFRTPIYKGVEIIRGMRGFTTGYAVPTYVVDAPGGGGKIPL 474


>gi|229496618|ref|ZP_04390332.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406]
 gi|229316515|gb|EEN82434.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406]
          Length = 418

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 120/315 (38%), Positives = 197/315 (62%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           + +  DL     +  E+ + ++E      +A+TP   +LI+P++PNDP+ +Q +P   EL
Sbjct: 29  IETLDDLKKYVTLTPEEEEGVRESLKSLRMAITPYYLSLIDPNDPNDPVRKQSVPTANEL 88

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
            I  E++ DP+ ++  SP  G+ HRYPDR+L  +  +C +YCR C RR   G QK     
Sbjct: 89  IISEEDQLDPLSEDEDSPTPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-QKDAASP 147

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
            +  + A+ YI+   ++ +V+ +GGD L++S   ++ +L+ LR I HV+I+RF SR P+V
Sbjct: 148 RERIDKAIEYIERTPEVRDVLLSGGDALMVSDSMIEYILQRLRAIDHVEIIRFGSRTPVV 207

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI PEL++ LK+   P+++  H NHP E + E+  A  RLANAG+ L +Q+VLL+GI
Sbjct: 208 LPQRITPELVEILKKY-HPIWLNTHFNHPNEITAESKEACERLANAGVPLGNQTVLLRGI 266

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   ++  L+   V++R++PYY++  DL+ G  HFR  + +G +I+ +L+   SG   P
Sbjct: 267 NDCTYVMKKLVHELVKIRVRPYYIYVCDLSRGIGHFRTPVSKGIEIIENLRGHTSGYAVP 326

Query: 308 FYILDLPGGYGKVKI 322
            +++D PGG GK+ +
Sbjct: 327 TFVVDAPGGGGKIPV 341


>gi|51891173|ref|YP_073864.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863]
 gi|51854862|dbj|BAD39020.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863]
          Length = 448

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 126/323 (39%), Positives = 206/323 (63%), Gaps = 5/323 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ H+ +T+ + L     + +E+   I++  + + + +TP  A LI+P +P+ P+  Q 
Sbjct: 29  WQVSHR-ITNLEQLKQVVNLTEEEEAAIRDSQHLFRLGITPHYATLIDPDDPHCPMRLQA 87

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P+  EL     E  DP+ ++  SP+ GI HRYPDR+L  + H C +YCR C RR +VG 
Sbjct: 88  VPKYAELAWADYEMGDPLHEDVDSPVPGITHRYPDRVLFLITHECSLYCRHCTRRRIVGD 147

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q+   +S+   + A+AYI+   +I +V+ +GGDPL +  +RL+ V+K LR I HV+I+R 
Sbjct: 148 QEA--MSTAMLDQAIAYIRAHPEIRDVLISGGDPLAVPDRRLEYVIKKLRAIPHVEIIRI 205

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLS 239
            +R+P+V PQRI PEL+  L++   P+++  H NHP+E    +A  A+ RLA+AGI   +
Sbjct: 206 GTRMPVVLPQRITPELVNMLRQY-HPIWLNTHFNHPFEVQHPKAREAMERLADAGIPTGN 264

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLKG+ND   ++  L+   V++R +PYY+++ DL+ G SHFR ++ +G  I+ +L+ 
Sbjct: 265 QSVLLKGVNDCAVVMRRLVHELVKVRCRPYYIYNCDLSEGLSHFRTSVAKGVAIIEALRG 324

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
             SG C P +++D PGG GK+ +
Sbjct: 325 HTSGFCVPTFVVDAPGGGGKIPV 347


>gi|148264204|ref|YP_001230910.1| lysine 2,3-aminomutase YodO family protein [Geobacter
           uraniireducens Rf4]
 gi|146397704|gb|ABQ26337.1| L-lysine 2,3-aminomutase [Geobacter uraniireducens Rf4]
          Length = 347

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 136/348 (39%), Positives = 208/348 (59%), Gaps = 13/348 (3%)

Query: 8   LTSAQDLYNANLIKKEQI--------DEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
           +   Q++  A++   EQ+        + +  +   Y + +TP   NLIN   P DP+ RQ
Sbjct: 1   MGKWQNILAASITSPEQLARRFGIDAEPLLRVVQRYPMRITPYYLNLIN--EPGDPLWRQ 58

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   EL     ++EDP+ +   SP+ G++HRYPDR++  +   C VYCRFC R+  VG
Sbjct: 59  CVPDARELED-DLQQEDPLREEILSPVPGLIHRYPDRVVWLVSSTCAVYCRFCMRKRQVG 117

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
              G V       AAL YI  + +I +VI +GGDPL+L    L+++L  LR I H++I+R
Sbjct: 118 C-VGAVTGKVQISAALDYIASRPEIRDVILSGGDPLLLDDDALEEILARLRQIPHLEIIR 176

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             SRVP+  P+RI   L + LK    P+YI  H NHP E + E+  A +RLA+AGI L +
Sbjct: 177 IGSRVPVTLPERITTRLCRMLKRY-HPLYINTHFNHPLEITAESATACARLADAGIPLGN 235

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLKG+ND+P ++  LM+  +++R+KPYY+H  DL  GT HFR  +E+G +I+ SL+ 
Sbjct: 236 QTVLLKGVNDNPGVMKRLMQLLLKIRVKPYYIHQMDLVKGTGHFRTRVEQGLEIMESLRG 295

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             SG+  P+Y++DL GG GKV +    +K+VG     + ++   + +Y
Sbjct: 296 HTSGMASPYYVIDLEGGKGKVPLLPDYVKRVGGNVLLVRNYRGEMVEY 343


>gi|197118777|ref|YP_002139204.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem]
 gi|197088137|gb|ACH39408.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem]
          Length = 344

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 125/315 (39%), Positives = 190/315 (60%), Gaps = 10/315 (3%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TS ++L     + + Q      +   Y + +TP    LI    P DPI RQ +P   EL
Sbjct: 12  ITSPEELSG---LFRLQGGAFSPVVERYPMRITPYYLGLIE--EPGDPIWRQCVPDPAEL 66

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           + L  +  DP+ +   SP+ G++HRYPDR++  +   C VYCRFC R+  VG      ++
Sbjct: 67  DDL-TQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGCAS---MA 122

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
               + A+AYI    +I +V+ +GGDPL+L   RL  +L  L  I HV+I+R  +R P+ 
Sbjct: 123 PAKVDDAIAYIAGDPRIRDVVLSGGDPLLLPDDRLAAILSALSRIPHVEIVRIGTRAPVT 182

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P+RI P L + LK +  PVY+  H NHP E + ++  A +RLA+AG+ L +Q+VLLKG+
Sbjct: 183 LPERITPGLTRLLKRS-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTVLLKGV 241

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           NDDP+ + +LMR  + +R++PYY+H  DL  GT+HFR  + +G  ++ +L+   SGL  P
Sbjct: 242 NDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVGQGISVMQALRGHTSGLAVP 301

Query: 308 FYILDLPGGYGKVKI 322
            Y++DLPGG GKV +
Sbjct: 302 HYVIDLPGGKGKVDV 316


>gi|154248906|ref|YP_001409731.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium
           nodosum Rt17-B1]
 gi|154152842|gb|ABS60074.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium
           nodosum Rt17-B1]
          Length = 422

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 122/311 (39%), Positives = 197/311 (63%), Gaps = 9/311 (2%)

Query: 37  IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           +A+TP  A+L++P NP  PI RQ +P  +EL     +  DP+ ++  SP+ G+ HRYPDR
Sbjct: 59  MAITPYYASLMDPDNPKCPIRRQAVPTAKELFTSQWDMTDPLHEDEDSPVPGLTHRYPDR 118

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L+ +  +C +YCR C RR   G Q     + ++ +A + Y++E  Q+ +V+ +GGD L+
Sbjct: 119 VLMLVTDMCSMYCRHCTRRRFAG-QHDRARTKQEIDAMIEYVRETPQVRDVLISGGDGLL 177

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           +  + L+ +LK LR IKHV+I+R  +R P+V PQ I PEL   LK+   P++I  H NHP
Sbjct: 178 VGIEMLEYILKELRKIKHVEIIRIGTRTPVVLPQMITPELTNMLKKY-HPIWINTHFNHP 236

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E + E+  A   LA+AGI L +QSVLL+GIND P I+  L+   V++R++PYY++  DL
Sbjct: 237 KEITPESSRACEMLADAGIPLGNQSVLLRGINDSPYIMMELVHQLVKIRVRPYYIYQCDL 296

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
           + G +HFR ++++G +I+ +L    SG C P++++D P G GK+++       + N    
Sbjct: 297 SQGLTHFRTSVKKGLEIMEALIGHTSGFCVPWFVVDAPAGGGKIRV-------MPNYVIS 349

Query: 337 ITDHHNIVHDY 347
           ++DH  I+ +Y
Sbjct: 350 MSDHTVILRNY 360


>gi|20807210|ref|NP_622381.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
 gi|254478895|ref|ZP_05092258.1| KamA family protein [Carboxydibrachium pacificum DSM 12653]
 gi|20515713|gb|AAM23985.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
 gi|214035161|gb|EEB75872.1| KamA family protein [Carboxydibrachium pacificum DSM 12653]
          Length = 417

 Score =  248 bits (634), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 123/340 (36%), Positives = 206/340 (60%), Gaps = 2/340 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           + + ++L     + +E+ + I +      +A+TP   +LI+P++PNDPI ++ +P   EL
Sbjct: 29  IETVEELKKYLPLSEEEEEAISKALQKLRMAITPYYLSLIDPNDPNDPIRKRAVPTIHEL 88

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
              PE+  DP+ ++  SP+ G+ HRYPDR+L+ +   C +YCR C RR   G     +  
Sbjct: 89  YQAPEDLVDPLYEDVDSPVPGLTHRYPDRVLMLVTDQCSMYCRHCTRRRFAGETDAPMPM 148

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
            K  E  + YI+   QI +V+ +GGDPL LS  RL++++K LR I HV+I+R  S VP+V
Sbjct: 149 DK-IEKQIEYIRNTPQIRDVLISGGDPLTLSDSRLEEIIKRLREIPHVEIIRIGSSVPVV 207

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P RI PEL+  LK+   P+++  H NHP+E +E++  A   LA+AGI L +Q+VLL+G+
Sbjct: 208 LPMRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSKRACEMLADAGIPLGNQTVLLRGV 266

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   ++  L+   V++R++PYY++  DL+ G SHFR  + +G +I+  L+   SG C P
Sbjct: 267 NDCVHVMKKLVHELVKIRVRPYYIYQCDLSFGLSHFRTPVSKGIEIIEGLRGHTSGYCVP 326

Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            +++D PGG GK+ +  + +    +    + ++  ++  Y
Sbjct: 327 TFVVDAPGGGGKIPVGPNYVISQSHDKIVLRNYEGVIVTY 366


>gi|158521904|ref|YP_001529774.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
           oleovorans Hxd3]
 gi|158510730|gb|ABW67697.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
           oleovorans Hxd3]
          Length = 454

 Score =  248 bits (634), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 123/327 (37%), Positives = 193/327 (59%), Gaps = 4/327 (1%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           E++    E+     + +TP   +L++   P  P+ R  +P   E   LP E  DP+G+  
Sbjct: 111 EEMGVFAELKTKLPLGVTPYYMSLLHGSAPGHPLRRTVVPTVHEFFKLPGEENDPLGEEG 170

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEK 141
           H+ + G+VHRYPDR+LL +   C  YCR+C R  +VG  +G +  S+   E A+ YI+  
Sbjct: 171 HTQMPGLVHRYPDRVLLLVSGFCSTYCRYCTRSRLVG--RGKIYPSRSRLEKAIDYIRNT 228

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
             I +V+ +GGDPL LS  +L  +L  +R I HV+I+R  ++VP V PQR+ PEL++ L+
Sbjct: 229 PTIRDVLLSGGDPLTLSDAKLDWILGRIREIPHVEIIRIGTKVPAVLPQRVTPELVRVLR 288

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           +   P+++++H  HP E + EA  A + LA+AGI L SQ+VLLKGINDD   +  LM   
Sbjct: 289 KY-HPLWMSLHFTHPEECTPEAYDACAMLADAGIPLGSQTVLLKGINDDVATMKALMHQM 347

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
           + +R+KPYYL+  D  AG+ HFR ++  G +I+  L+   SG   P Y++D PGG GK+ 
Sbjct: 348 MRMRVKPYYLYQCDPVAGSGHFRTSVARGLEIIRGLRGHTSGYAVPTYVIDAPGGGGKIP 407

Query: 322 IDTHNIKKVGNGSYCITDHHNIVHDYP 348
           +  + +    +    + ++ N +  YP
Sbjct: 408 LLPNYVVSSSDAGVVLENYENRLFTYP 434


>gi|312621465|ref|YP_004023078.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201932|gb|ADQ45259.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 407

 Score =  248 bits (634), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 204/324 (62%), Gaps = 9/324 (2%)

Query: 1   MQLRHKTLTSA--QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            QL+++  +S   ++L N +  + EQI+E+   +  Y  A++P   +LI+P NPN PI +
Sbjct: 63  WQLKNRVASSKILKELLNLDEKEAEQIEEV---AKSYRFAISPYYLSLIDPDNPNCPIKK 119

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +P   EL  + +   DP+ + + SP K I  RYPDR+++K+ ++C ++CRFC RR ++
Sbjct: 120 QSVPSSFEL--IEKGELDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLI 177

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L  +L++LR I HV+I+
Sbjct: 178 G-ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLDWILRSLRQIPHVEII 236

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  +R P+  PQRI  EL+  LK+   P+YI  H NHP E ++E+  A   L++AG+ L 
Sbjct: 237 RIGTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLSDAGVPLG 295

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q VLL G+N+D  ++  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ SL+
Sbjct: 296 NQMVLLNGVNNDKYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLR 355

Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
            + SG+  P YI++ P G GK  I
Sbjct: 356 GRTSGMAVPTYIINAPKGKGKTPI 379


>gi|15807697|ref|NP_285351.1| hypothetical protein DR_A0027 [Deinococcus radiodurans R1]
 gi|6460574|gb|AAF12280.1|AE001862_106 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 492

 Score =  248 bits (633), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 118/288 (40%), Positives = 180/288 (62%), Gaps = 2/288 (0%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           + + +TP  A+L++P +P  P+ RQ IP +EEL       ED + ++ HSP+ G+VHRYP
Sbjct: 81  FRLDITPYFASLMDPEDPTCPVRRQVIPTEEELQPFTSMMEDSLAEDKHSPVPGLVHRYP 140

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           DR+L+ +   C  YCR+C R  +VG    T  +  + EA L Y++   Q+ +V+ +GGDP
Sbjct: 141 DRVLMLVTTQCASYCRYCTRSRIVGDPTET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDP 199

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L L+ K L ++L  LR I+H++I+R  +RVP+  P R+  EL   L E   P+++ IH N
Sbjct: 200 LTLAPKVLGRLLSELRKIEHIEIIRIGTRVPVFMPMRVTQELCDTLAEH-HPLWMNIHVN 258

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           HP E + E   A  RL  AG+ L +QSVLL+G+ND P I+  L+R  V++R++PYY++  
Sbjct: 259 HPKEITPEVAEACDRLTRAGVPLGNQSVLLRGVNDHPVIMQKLLRELVKIRVRPYYIYQC 318

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           DL  G  H R T+ +G +I+ SL+   SG   P Y++D PGG GK+ +
Sbjct: 319 DLVHGAGHLRTTVSKGLEIMESLRGHTSGYSVPTYVVDAPGGGGKIPV 366


>gi|331004173|ref|ZP_08327653.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411583|gb|EGG90993.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 418

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 122/347 (35%), Positives = 212/347 (61%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLR++ +T+ + L     + +++ + +K    +  +A+TP   +LI+  + +DP+ +Q 
Sbjct: 23  WQLRNR-ITNVESLKKYIKLTEKEEEGVKRCLENLRMAITPYYLSLIDLEDEDDPVRKQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL+I   +  DP+ ++  SP+ G+ HRYPDR+L  +   C +YCR C RR   G 
Sbjct: 82  IPTVSELHIADADLADPLHEDTDSPVHGLTHRYPDRVLFLVTDQCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q  T + +   +A + YI+   ++ +V+ +GGD L++S+++L+ ++  LR I+HV+I+R 
Sbjct: 141 QNDTSVPTSQVDACIDYIRRHPEVRDVLLSGGDALLISNEKLEYIISELRKIEHVEIVRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL+  LK+   PV++  H NHP E ++E+  A +RLA+AGI L +Q
Sbjct: 201 GSRTPVVMPQRITPELVNMLKKY-HPVWLNTHFNHPSEITKESAEACARLADAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL G+ND   I+ +L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 260 TVLLAGVNDCVHIMTDLVHELVKIRVRPYYIYQCDLSQGLEHFRTPVSKGIEIIEGLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P +++D PGG GK  +  + +     G   + ++  ++  Y
Sbjct: 320 TSGYCVPTFVVDAPGGGGKTPVMPNYVISQSPGKVILRNYEGVITTY 366


>gi|226355793|ref|YP_002785533.1| L-lysine 2,3-aminomutase [Deinococcus deserti VCD115]
 gi|226317783|gb|ACO45779.1| putative L-lysine 2,3-aminomutase [Deinococcus deserti VCD115]
          Length = 493

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 119/288 (41%), Positives = 178/288 (61%), Gaps = 2/288 (0%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           + + +TP  A+L++P +P  P+ RQ IP   EL       ED + ++ HSP+ G+VHRYP
Sbjct: 73  FRLDITPYFASLMDPEDPTCPVRRQVIPTHHELTPFTSMMEDSLAEDKHSPVPGLVHRYP 132

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           DR+L+ +   C  YCR+C R  +VG    T  +  + EA L Y++   Q+ +V+ +GGDP
Sbjct: 133 DRVLMLVTTQCASYCRYCTRSRIVGDPSET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDP 191

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L L+ K L ++L  LR I+H++I+R  +RVP+  P R+  EL   L E   PV++ IH N
Sbjct: 192 LTLAPKVLGRLLAELRKIEHIEIVRIGTRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVN 250

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           HP E + E   A  RL  AG+ L +QSVLL+GIND P I+  L+R  V++R++PYY++  
Sbjct: 251 HPREITPEVAEACDRLTRAGVPLGNQSVLLRGINDHPVIMQKLVRELVKIRVRPYYIYQC 310

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           DL  G  H R T+ +G +I+ SL+   SG   P Y++D PGG GK+ +
Sbjct: 311 DLVHGAGHLRTTVSKGLEIMESLRGHTSGYSVPTYVVDAPGGGGKIPV 358


>gi|312877848|ref|ZP_07737796.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795395|gb|EFR11776.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 407

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 130/335 (38%), Positives = 209/335 (62%), Gaps = 9/335 (2%)

Query: 1   MQLRHKTLTSA--QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            QL+++ L++   ++L N N  + +QI+E+ ++   Y  A++P    LI+P +PN PI +
Sbjct: 63  WQLKNRVLSAKTLKELLNLNEKETQQIEEVAKV---YRFAISPYYLLLIDPDDPNCPIKK 119

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +P   EL  + +   DP+ + + SP K +  RYPDR+++K+ ++C ++CRFC RR ++
Sbjct: 120 QSVPSSFEL--IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLI 177

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+
Sbjct: 178 G-ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEII 236

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  +R P+  PQRI  EL+  LK+   P+YI  H NHP E ++E+  A   LA++GI L 
Sbjct: 237 RIGTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLADSGIPLG 295

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q VLL G+N+D  ++  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ SL+
Sbjct: 296 NQMVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLR 355

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
            + SG+  P YI++ P G GK  I    +   G G
Sbjct: 356 GRTSGMAVPTYIINAPKGKGKTPIMPSYLLYFGKG 390


>gi|282897351|ref|ZP_06305353.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii
           D9]
 gi|281198003|gb|EFA72897.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii
           D9]
          Length = 375

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 126/347 (36%), Positives = 203/347 (58%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+RH+ LT  +       +  E+        + +++A+TP  A+L++P + N P+  Q 
Sbjct: 28  WQMRHR-LTKLEQFQKLLCLTPEEEQGFIMAVDKFAVAVTPYFASLLDPEDANCPLRLQV 86

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+KEEL +   +  DP G++N SP+ GIVHRYPDR+LL  L  C  YCR+C R  +V  
Sbjct: 87  IPRKEELIVSSGDMIDPCGEDNQSPVPGIVHRYPDRVLLLALDSCAAYCRYCTRSRLVSQ 146

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            + T +  +  +A + Y+++ +++ +V+ +GGDPL++S++ L  +L  LR I H++ +R 
Sbjct: 147 GEMTPIKHR-LDAMINYLEDHTEVRDVLISGGDPLLMSNQVLDSLLGRLRGISHIEFVRI 205

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SRVP   PQRI PEL++ L++    V++++H  H  E + E   A   LA+ GI L  Q
Sbjct: 206 GSRVPCFLPQRITPELVKVLRK--HRVWLSVHFCHLRELTLEVAQACDLLADGGIPLGCQ 263

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+ND  + L NL    ++LR++PYYL+  D   GTSH R +I+ G  +++ L+  
Sbjct: 264 TVLLKGVNDSEQALKNLFHGLLKLRVRPYYLYQCDPVVGTSHLRTSIQSGLDLISKLRSH 323

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            +G   P Y++D PGG GKV I    +    NG   + +  +    Y
Sbjct: 324 TTGYAIPTYVIDAPGGGGKVPIQPETLIGYENGKAIVKNWQDRSFTY 370


>gi|312794434|ref|YP_004027357.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312181574|gb|ADQ41744.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 407

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 128/333 (38%), Positives = 208/333 (62%), Gaps = 5/333 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ L SA+ L     + +++  +I+E++  Y  A++P   +LI+P +PN PI +Q 
Sbjct: 63  WQLKNRVL-SAKTLKELLNLDEKETQQIEEVAKAYRFAISPYYLSLIDPDDPNCPIKKQS 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL  + +   DP+ + + SP K +  RYPDR+++K+ ++C ++CRFC RR ++G 
Sbjct: 122 VPSSLEL--IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+R 
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQRI  EL+  LK+   P+YI  H NHP E ++E+  A   LA++GI L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-PPIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL G+N+D  ++  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ +L+ +
Sbjct: 298 MVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIENLRGR 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
            SG+  P YI++ P G GK  I    +   G G
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPSYLLYFGKG 390


>gi|197121711|ref|YP_002133662.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
 gi|196171560|gb|ACG72533.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
          Length = 415

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 122/304 (40%), Positives = 182/304 (59%), Gaps = 2/304 (0%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           +  E+ +   +    + + +TP  A L++P +P  PI  Q +P   ELNIL  + EDP+ 
Sbjct: 87  VTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQSVPTMGELNILASDLEDPLA 146

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +    P+ GI HRYPDR+L    H CPVYCR C R+  V S   +  + +  E +LAYI 
Sbjct: 147 EERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKV-SDPTSAAAKRQIEESLAYIA 205

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
           + ++I +V+ +GGDPL LS  RL  +L  LR I HV+I R  +R  +  PQR+  + +  
Sbjct: 206 QHTEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRLGTRNLVTLPQRVTDDFVYM 265

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           L+    PVY+  H NHP E + EA  A  RLA+AG ++ +Q VLLKG+NDDP ++  L  
Sbjct: 266 LRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQMVLLKGVNDDPAVVKELNH 324

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             + +RI+PYY++  DLA G SHFR  +E G +I+ +L+   SGL  P +++D P G GK
Sbjct: 325 KLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGHTSGLAVPQFVVDAPNGGGK 384

Query: 320 VKID 323
           + ++
Sbjct: 385 IPVN 388


>gi|220916508|ref|YP_002491812.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954362|gb|ACL64746.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 415

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 122/304 (40%), Positives = 182/304 (59%), Gaps = 2/304 (0%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           +  E+ +   +    + + +TP  A L++P +P  PI  Q +P   ELNIL  + EDP+ 
Sbjct: 87  VTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQSVPTMGELNILASDLEDPLA 146

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +    P+ GI HRYPDR+L    H CPVYCR C R+  V S   +  + +  E +LAYI 
Sbjct: 147 EERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKV-SDPTSAAAKRQIEESLAYIA 205

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
           + ++I +V+ +GGDPL LS  RL  +L  LR I HV+I R  +R  +  PQR+  + +  
Sbjct: 206 QHTEIRDVVISGGDPLSLSDDRLDHILGRLRAIPHVEIFRLGTRNLVTLPQRVTDDFVYM 265

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           L+    PVY+  H NHP E + EA  A  RLA+AG ++ +Q VLLKG+NDDP ++  L  
Sbjct: 266 LRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQMVLLKGVNDDPAVVKELNH 324

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             + +RI+PYY++  DLA G SHFR  +E G +I+ +L+   SGL  P +++D P G GK
Sbjct: 325 KLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGHTSGLAVPQFVVDAPNGGGK 384

Query: 320 VKID 323
           + ++
Sbjct: 385 IPVN 388


>gi|188587476|ref|YP_001919021.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179352163|gb|ACB86433.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 416

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 124/305 (40%), Positives = 192/305 (62%), Gaps = 3/305 (0%)

Query: 18  NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
           NL  KE+ + I++      +A+TP  A+L++  +P+ PI RQ +P   ELN    + EDP
Sbjct: 38  NLTDKEE-EGIQQALKTLRMAITPYYASLMDKDDPSCPIRRQAVPSSLELNFGDSDLEDP 96

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
           + ++  SP++GI HRYPDR+L  +   C +YCR C RR + G+        +  + A+ Y
Sbjct: 97  LSEDTDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRIAGTTDKAA-PKEVVDNAIEY 155

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
           I+   ++ +V+ +GGD LI+S +RL+ +L  L  I+HV+I+R  +R P+V PQRI  +L+
Sbjct: 156 IKNTPRVRDVLISGGDGLIISDERLEYILDQLYKIEHVEIIRIGTRAPVVLPQRITDDLV 215

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
             LK+   PV++  H NHP E + EA  A+++LA+AGI L +QSVLLKGIND P  + NL
Sbjct: 216 SILKKY-HPVWLNTHYNHPKELTSEAQKALAKLADAGIPLGNQSVLLKGINDCPGTMKNL 274

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
           +   V+ R++PYY++  DL+ G  HFR ++  G +IV  L+   SG   P Y++D PGG 
Sbjct: 275 VHELVKHRVRPYYIYQCDLSQGIEHFRTSVSAGLEIVEHLRGHTSGFAVPTYVVDAPGGG 334

Query: 318 GKVKI 322
           GK+ +
Sbjct: 335 GKIPV 339


>gi|308272545|emb|CBX29149.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.]
          Length = 425

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 125/332 (37%), Positives = 197/332 (59%), Gaps = 1/332 (0%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           +  E+ D IK   ++  +++TP  A+L++  NP  P+ R  +P + EL     E EDP+G
Sbjct: 85  LSAEETDAIKTNGDNLPLSITPYYASLLDKTNPMHPLRRAVVPVRAELCRSFGEAEDPLG 144

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           ++  SP+ GIVHRYPDR+L  +   C  YCR+C R  MVG        + + E AL YI+
Sbjct: 145 EDADSPVPGIVHRYPDRVLFLVTDFCSTYCRYCTRSRMVGRSSACHGGTSNWEKALNYIE 204

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
             + I +V+ +GGDPL L+   L+ +L  L  I+H++I+R  ++VP+V PQRI   L + 
Sbjct: 205 ANTGIRDVLLSGGDPLTLNDDALEWLLLRLCRIQHLEIVRIGTKVPVVLPQRITSRLARM 264

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           LK    P++I IH  HP E + E   A +RLA+AGI L SQ+VLLKGINDD + +  L  
Sbjct: 265 LKRY-HPLWINIHFMHPEEVTPETSTACTRLADAGIPLGSQTVLLKGINDDVDTMKELYH 323

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             +++R++PYYL+  D   G+ HFR ++++G +I+  L+   SGL  P +++D PGG GK
Sbjct: 324 RLLKIRVRPYYLYQCDPIIGSGHFRTSVKKGLEIIKGLRGHTSGLAVPNFVIDAPGGGGK 383

Query: 320 VKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           + +    +         + ++ +++  YP  S
Sbjct: 384 IPLLPEYVLGRYGDEILLKNYEDLIFRYPDSS 415


>gi|332703220|ref|ZP_08423308.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332553369|gb|EGJ50413.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 430

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 125/327 (38%), Positives = 192/327 (58%), Gaps = 3/327 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+ + +TS QDL  + L   E             +A+TP   +L +   P++ + R  
Sbjct: 73  WQLKSR-ITSYQDL-GSMLALSEAEQAAANCGAPLPLAITPYYLSLFHDQGPDNGVRRSI 130

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E  + P E EDP+G+++HSP+ G+VHRYPDR+L      C  YCR+C R   VG 
Sbjct: 131 VPTGFERLVNPGEAEDPLGEDHHSPVPGLVHRYPDRVLFLTTDYCAAYCRYCTRSRRVGK 190

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  +  + K  +AA+ YI     + +V+ +GGDPL +S   L  +L  +R I HV+++R 
Sbjct: 191 KACSSGNRKHWDAAIDYIARTPSVRDVLLSGGDPLTMSDAALDYLLGRIRAIPHVEVMRI 250

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            ++ P+V PQRI P+L + L+    P+ I++H  HP E S E+  A  RLA+AGI L SQ
Sbjct: 251 GTKAPMVLPQRITPQLTRVLRRY-HPLMISVHCTHPGELSPESAEAFKRLADAGIPLGSQ 309

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGINDD   L +LM   ++ R++PYYL+H D   GT HFR ++ +G +++  L+  
Sbjct: 310 TVLLKGINDDVPTLKSLMHGLLKNRVRPYYLYHCDPVQGTGHFRTSVAKGVEMIEGLRGH 369

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNI 327
            SG   P +++D PGG GK+ ++   I
Sbjct: 370 TSGYAIPTFVVDAPGGGGKIPVNPDYI 396


>gi|225734347|pdb|2A5H|A Chain A, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
           Aminomutase From Clostridium Subterminale Sb4, With
           Michaelis Analog (L-Alpha-Lysine External Aldimine Form
           Of Pyridoxal-5'-Phosphate).
 gi|225734348|pdb|2A5H|B Chain B, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
           Aminomutase From Clostridium Subterminale Sb4, With
           Michaelis Analog (L-Alpha-Lysine External Aldimine Form
           Of Pyridoxal-5'-Phosphate).
 gi|225734349|pdb|2A5H|C Chain C, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
           Aminomutase From Clostridium Subterminale Sb4, With
           Michaelis Analog (L-Alpha-Lysine External Aldimine Form
           Of Pyridoxal-5'-Phosphate).
 gi|225734350|pdb|2A5H|D Chain D, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
           Aminomutase From Clostridium Subterminale Sb4, With
           Michaelis Analog (L-Alpha-Lysine External Aldimine Form
           Of Pyridoxal-5'-Phosphate)
          Length = 416

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 123/322 (38%), Positives = 196/322 (60%), Gaps = 3/322 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + + ++L     + KE+ + + +       A+TP   +LI+P++PNDP+ +Q 
Sbjct: 22  WQVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRXAITPYYLSLIDPNDPNDPVRKQA 80

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   ELN    + EDP+ ++  SP+ G+ HRYPDR+LL +   C  YCR C RR   G 
Sbjct: 81  IPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDXCSXYCRHCTRRRFAG- 139

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q       +  + A+ YI+   Q+ +V+ +GGD L++S + L+ ++  LR I HV+I+R 
Sbjct: 140 QSDDSXPXERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI 199

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL+  LK+   PV++  H NHP E +EE+  A   LA+AG+ L +Q
Sbjct: 200 GSRTPVVLPQRITPELVNXLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQ 258

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND   +   L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 259 SVLLRGVNDCVHVXKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGH 318

Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
            SG C P +++D PGG GK  +
Sbjct: 319 TSGYCVPTFVVDAPGGGGKTPV 340


>gi|193213047|ref|YP_001999000.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum
           NCIB 8327]
 gi|193086524|gb|ACF11800.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum
           NCIB 8327]
          Length = 440

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 129/350 (36%), Positives = 204/350 (58%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+RH  + L + + L +  L   EQ     E    + ++ TP   +LIN  +  NDP+ 
Sbjct: 28  WQMRHSIRDLDTFERLLDITL-SDEQRKAFGETVQKFPMSTTPYYLSLINTDDMENDPVF 86

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q +P   EL I+  +  DP+ ++  SP   + HRYPDR+LL + + CP+YCR C R+  
Sbjct: 87  LQSVPSPLELKIMKGDMADPLHEDEDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG +  T+ +    +A + YI+   Q+ +V+ +GGDP +LS + L  +L  LR I+HV+I
Sbjct: 147 VGDED-TIPNRAAIQAGIDYIRNTPQVRDVLLSGGDPFLLSDEMLDWILTELRAIEHVEI 205

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V PQRI PEL+  L +  +PV++  H NHP E ++ A  A++RLA+ G+ L
Sbjct: 206 IRVGTRTPVVLPQRITPELVAILGKH-QPVWVNTHFNHPREMTQSARNALARLADVGVPL 264

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL GIND P I+  L+   V  R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG C P Y++D PGG GK+ +  + +         + ++  ++  Y
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTY 374


>gi|312135958|ref|YP_004003296.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
           owensensis OL]
 gi|311776009|gb|ADQ05496.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           owensensis OL]
          Length = 407

 Score =  246 bits (628), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 129/333 (38%), Positives = 210/333 (63%), Gaps = 5/333 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +TSA+ L     + +++  +I+E++  Y  A++P   +LI+P +PN PI +Q 
Sbjct: 63  WQLKNR-ITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPNCPIKKQS 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL  + +   DP+ + + SP K +  RYPDR+++K+ ++C ++CRFC RR ++G 
Sbjct: 122 VPSSFEL--IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+R 
Sbjct: 179 ETDTHASLDDITDAIEYVAKNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQ+I  EL+  LK+   P+YI  H NHP E ++E+  A   LA++GI L +Q
Sbjct: 239 GTRAPVTLPQKITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL G+N+D  I+  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKYIVRKLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
            SG+  P YI++ P G GK  I  + +   G G
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKG 390


>gi|297569348|ref|YP_003690692.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296925263|gb|ADH86073.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 360

 Score =  246 bits (628), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 131/324 (40%), Positives = 195/324 (60%), Gaps = 10/324 (3%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL--NILPEEREDPIGDNNHSP 85
           +K ++  Y + + P   +LIN   P DPI RQ +P   EL   + P    DP+G+ ++SP
Sbjct: 41  LKAVTARYPLRINPYYLSLIN--QPGDPIWRQAVPDVRELEDTVCPA---DPLGEEDYSP 95

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQI 144
           + G+VH+Y DR LL +   C +YCRFC R+  VG+++     S+   +AALAY+++   I
Sbjct: 96  VPGLVHKYRDRALLLVTGQCAMYCRFCTRKRKVGTREMAAAGSAAQLDAALAYLEQTPAI 155

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            +V+ +GGDPL+L   RL  +L  LR I+H++I+R  SRVP   PQR+  +L   LK+  
Sbjct: 156 HDVLISGGDPLLLPDGRLIPLLTRLRRIRHLEIIRLGSRVPCTLPQRVTLKLAAALKKF- 214

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
            P++I  H NHP E + EA  A  RLA+AGI L +Q+VLLKG+NDD   +  LMR  +++
Sbjct: 215 HPLFINTHFNHPREITPEAARACQRLADAGIPLGNQTVLLKGVNDDAATIRELMRGLLKI 274

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
           R+KPYYL   DL+ GT HFR  +E+G  I+  L    SGL  P + LD P G GK+ +  
Sbjct: 275 RVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLATPTFALDAPEGRGKIPLTP 334

Query: 325 HNIKKVGNGSYCITDHHNIVHDYP 348
             ++ +G+     T++  +   YP
Sbjct: 335 DYLQSLGD-KLIFTNYQGLPCQYP 357


>gi|218961635|ref|YP_001741410.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730292|emb|CAO81204.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas
           acidaminovorans]
          Length = 415

 Score =  246 bits (628), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 126/321 (39%), Positives = 200/321 (62%), Gaps = 3/321 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q++++  T AQ L     ++ E+    K+ +  + +A+TP   +LI+  NP DPI  Q I
Sbjct: 22  QIKNRITTHAQ-LSKYIELQPEEEAVFKDKAFSFRMAITPHYLSLIDHSNPYDPIRLQAI 80

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P+  E +I P +  DP+ ++  +P+ G+ HRYPDR+LL L   C +YCR C RR   G  
Sbjct: 81  PRIAESHISPSDMADPLSEDADAPVPGMTHRYPDRVLLLLTDQCAMYCRHCTRRRKAGEH 140

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
               +  ++ E AL YI+E  ++ +VI +GGDPL LS +RL  +L  L  I+H++I+R  
Sbjct: 141 DAP-MPKENVEKALEYIKEHKEVRDVILSGGDPLTLSDERLDDILNRLSKIEHIEIVRLG 199

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +R P+V PQR    L+  L++  K V++  H NHP E  E++  A++++A  GI + +QS
Sbjct: 200 TRTPVVLPQRFTDSLLNILQKY-KFVWLNTHYNHPNELCEDSCKALAKIAETGIPMGNQS 258

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND+ +++  L+   V+ R++PYY++  DL+ G SHFR  I +G +I+ SL+   
Sbjct: 259 VLLKGVNDNVDVMKALVHKLVKNRVRPYYIYQCDLSEGISHFRTPIAKGIEIMESLRGHT 318

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
           SGLC P Y++D PGG GK+ +
Sbjct: 319 SGLCVPTYVVDAPGGGGKIPV 339


>gi|145220171|ref|YP_001130880.1| L-lysine 2,3-aminomutase [Prosthecochloris vibrioformis DSM 265]
 gi|145206335|gb|ABP37378.1| L-lysine 2,3-aminomutase [Chlorobium phaeovibrioides DSM 265]
          Length = 441

 Score =  246 bits (627), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 123/329 (37%), Positives = 197/329 (59%), Gaps = 3/329 (0%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPI 78
           +  EQ +   + +  + +++TP   +LIN  +  NDP+  Q +P   EL+ILP +  DP+
Sbjct: 48  LSHEQREAFTQTAAKFPMSITPYYLSLINTADMENDPVFLQSVPSPRELHILPGDMADPL 107

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
            ++  SP   + HRYPDR+LL + + CP+YCR C R+  VG Q  T+ S     A + YI
Sbjct: 108 HEDRDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRKVGDQD-TIPSRAAISAGIEYI 166

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           ++  ++ +V+ +GGDP +LS + L  +L  LR I HV+I+R  +R P+V PQRI PEL+ 
Sbjct: 167 RQTPRVRDVLLSGGDPFLLSDEYLDWILTELRAIPHVEIIRIGTRTPVVLPQRITPELVA 226

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            LK+  +PV++  H NHP E ++ +  A++ LA+ G+ L +Q+VLL GIND P I+  L+
Sbjct: 227 MLKKH-QPVWVNTHFNHPRELTQSSKNALAMLADGGLPLGNQTVLLSGINDCPRIMKALV 285

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
              V  R++PYYL+  DL+ G SHFR  + +G +I+ SL    SG   P Y++D PGG G
Sbjct: 286 HKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFSVPTYVIDAPGGGG 345

Query: 319 KVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           K+ +  + +         + ++  ++  Y
Sbjct: 346 KIPVMPNYLISWSTNKVVLRNYEGVITTY 374


>gi|167752794|ref|ZP_02424921.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216]
 gi|167659863|gb|EDS03993.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216]
          Length = 413

 Score =  246 bits (627), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 121/303 (39%), Positives = 189/303 (62%), Gaps = 2/303 (0%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           +  E+ + I+E      +A+TP    LI+P NP+ PI +Q IP  EEL   P + EDP+ 
Sbjct: 39  LTAEEEEGIRESLKTLRMAITPYYLTLIDPENPHCPIRKQAIPTVEELKRSPADLEDPLH 98

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +++ SP+ G+ HRYPDR+L  +  +C +YCR C RR   G Q       K  +  + YI 
Sbjct: 99  EDSDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-QHDCATPEKQIDDCIDYIA 157

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
              Q+ +V+ +GGD L++S ++L+ ++  LR I HV+I+R  SR P+V PQRI PEL+  
Sbjct: 158 RTPQVRDVLLSGGDALLVSDEKLEYIISRLRAIPHVEIIRIGSRTPVVLPQRITPELVNM 217

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           LK+   P+++  H NHP E + E+  A +RLA+AGI L +QSVLL+G+ND   I+  L+ 
Sbjct: 218 LKKY-HPIWLNTHFNHPNEVTPESKQACARLADAGIPLGNQSVLLRGVNDCTHIMKKLVH 276

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             V++R++PYY++  DL+ G  HFR  + +G +I+ +L+   SG   P +++D PGG GK
Sbjct: 277 ELVKMRVRPYYIYICDLSLGIGHFRTPVSKGIEIIENLRGHTSGYAVPTFVVDAPGGGGK 336

Query: 320 VKI 322
           + +
Sbjct: 337 IPV 339


>gi|189425162|ref|YP_001952339.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ]
 gi|189421421|gb|ACD95819.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ]
          Length = 341

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 128/326 (39%), Positives = 195/326 (59%), Gaps = 10/326 (3%)

Query: 12  QDLYNANLIKKEQIDE--IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
           Q +  A L  + + DE  +K +++ Y   ++   A LI    P+DPI +Q +P   EL +
Sbjct: 4   QTVSLAELAHRFKFDETPLKPVADLYPYRISSYYAGLIT--APHDPIWQQCVPSLLEL-V 60

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
             E+  DP+ +   SP+ G++HRYPDR +L + + C  YCRFC R+  VG   G    S 
Sbjct: 61  DTEQHPDPLDEERLSPVPGLIHRYPDRAVLLVSNRCATYCRFCMRKRRVGCAGGQPALS- 119

Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
              AAL YI    Q+ ++I +GGDPL+LS   L ++L  LR I HV+++R  SR+P+  P
Sbjct: 120 ---AALEYIAATPQLRDIILSGGDPLMLSDDELHEILLALRRIPHVEVIRIGSRMPVTAP 176

Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
            RI P   + L E   P+Y+  H NHP E + EA  A   LA+ G+ L +Q+VLLKG+ND
Sbjct: 177 ARITPAFCRMLAEH-HPLYLNTHFNHPQELTSEAAQACRLLASVGVPLGNQTVLLKGVND 235

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
           D   +  L+   + L+++PYYLH  DL  GT+HFR  +E G++++ +L+ KISG+  P +
Sbjct: 236 DSPTMQALLTGLLRLQVRPYYLHQMDLVRGTAHFRTPLEHGRQLIGALRGKISGMAIPHF 295

Query: 310 ILDLPGGYGKVKIDTHNIKKVGNGSY 335
           ++DLPGG GKV +   ++ +VG   +
Sbjct: 296 VIDLPGGKGKVPVLPDSLTRVGEAVW 321


>gi|77919002|ref|YP_356817.1| hypothetical protein Pcar_1401 [Pelobacter carbinolicus DSM 2380]
 gi|77545085|gb|ABA88647.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
          Length = 457

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 122/314 (38%), Positives = 193/314 (61%), Gaps = 3/314 (0%)

Query: 35  YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
           + +++TP  A+LI+P +  NDP+  Q  P   EL + P E  DP+ ++  SP+ GI HRY
Sbjct: 84  FPLSITPYYASLIDPEDYQNDPVFIQSFPSPHELEVDPREMADPLAEDKDSPVPGITHRY 143

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           PDR+L  + ++C +YCR C R+  VG Q  ++   ++ +  L YI E  QI +V+ +GGD
Sbjct: 144 PDRVLFHVSNLCAMYCRHCTRKRKVGDQD-SIPGREEIKQGLEYIAENPQIRDVLLSGGD 202

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+LS + L  +L  LR I HVQ++R  +R+P+V P RI  +L+  L++   PV++  H 
Sbjct: 203 PLMLSDEYLDWILTALRNIPHVQVIRIGTRMPVVLPYRITDDLVDMLRKH-HPVWVNTHF 261

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E +  A AA+ +LA+AGI L +Q+VLL G+ND P I+  LM   V+ R++PYYL+ 
Sbjct: 262 NHPRELTSSARAALRKLADAGIPLGNQTVLLAGVNDCPRIIKELMHRLVDNRVRPYYLYQ 321

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
            DL+ G  HFR  + +G +I+ SL    SG   P Y++D PGG GK+ ++ + +  +   
Sbjct: 322 CDLSEGLMHFRTPVGKGIEIMESLIGHTSGFAIPTYVVDAPGGGGKIPLNPNYLVSLSTN 381

Query: 334 SYCITDHHNIVHDY 347
              + ++  ++  Y
Sbjct: 382 KVILRNYEGVITTY 395


>gi|86158970|ref|YP_465755.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775481|gb|ABC82318.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 375

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 122/304 (40%), Positives = 181/304 (59%), Gaps = 2/304 (0%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           +  E+ +   +    + + +TP  A L++P +P  PI  Q +P   ELNIL  + EDP+ 
Sbjct: 47  VTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQSVPTMGELNILASDLEDPLA 106

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +    P+ GI HRYPDR+L    H CPVYCR C R+  V S   +  + +  E +LAYI 
Sbjct: 107 EERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKV-SDPTSAAAKRQIEESLAYIA 165

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
           +  +I +V+ +GGDPL LS  RL  +L  LR I HV+I R  +R  +  PQR+  + +  
Sbjct: 166 QHPEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRLGTRNLVTLPQRVTDDFVYM 225

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           L+    PVY+  H NHP E + EA  A  RLA+AG ++ +Q VLLKG+NDDP ++  L  
Sbjct: 226 LRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQMVLLKGVNDDPAVVKELNH 284

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             + +RI+PYY++  DLA G SHFR  +E G +I+ +L+   SGL  P +++D P G GK
Sbjct: 285 KLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGHTSGLAVPQFVVDAPNGGGK 344

Query: 320 VKID 323
           + ++
Sbjct: 345 IPVN 348


>gi|225181511|ref|ZP_03734953.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
           alkaliphilus AHT 1]
 gi|225167759|gb|EEG76568.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
           alkaliphilus AHT 1]
          Length = 423

 Score =  246 bits (627), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 131/346 (37%), Positives = 202/346 (58%), Gaps = 3/346 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL+++ LT+ ++L     + + +   +    +   +A+TP  A L+NP + N PI  Q I
Sbjct: 24  QLKNR-LTTVEELRQVVALTEAEERGVASCLDTLRMAITPYYAMLMNPEDSNCPIRLQAI 82

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   EL     E EDP+ ++  SP  G+ HRYPDR+LL +   C +YCR C RR M G+ 
Sbjct: 83  PTATELESGECEAEDPLFEDVDSPAPGLTHRYPDRVLLLITDQCSMYCRHCTRRRMAGTN 142

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
               L   D + AL YI+    I +V+ +GGD L++S   L  +L  LR I+HV+I+R  
Sbjct: 143 D-QALPRSDVDKALDYIRNTPGIRDVLISGGDALLISDDYLDDILGKLRAIEHVEIIRIG 201

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +R P+V PQR+ PEL   LK+   P++I  H NHP E ++EA  A+S LA+AGI L +QS
Sbjct: 202 TRTPVVLPQRVTPELCNVLKKH-HPLFINTHFNHPTELTDEAKKAVSMLADAGIPLGNQS 260

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+GIND P +   L +  +  RI+PYYL+  DL+ G  HFR ++ +G +I+  L+   
Sbjct: 261 VLLRGINDCPYLYKVLAQRLLMNRIRPYYLYQCDLSPGLEHFRTSVAKGIEIIEHLRGHT 320

Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           SGL  P +++D PGG GK+ +    +  + +    + ++  ++  Y
Sbjct: 321 SGLAVPTFVVDAPGGGGKIPVSPQYMISMSDEKVILRNYEGVIAAY 366


>gi|158522524|ref|YP_001530394.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511350|gb|ABW68317.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
           oleovorans Hxd3]
          Length = 358

 Score =  245 bits (626), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 129/320 (40%), Positives = 191/320 (59%), Gaps = 5/320 (1%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           +   Y +++ P   +LI    P DP+ RQ +P   EL+    + +DP+ +   SP+ G++
Sbjct: 44  VCRAYPMSVNPYYLSLI--QAPGDPLWRQVVPDARELSGTLTD-DDPLTETAQSPVPGLI 100

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           HRYPDR+++ +   CPV CRFCFR+ + G    + L+    +AA AY++    + EVIF+
Sbjct: 101 HRYPDRVVVLVSGRCPVVCRFCFRKRLAGRAAAS-LTDDQVDAAAAYVRAAPAVREVIFS 159

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+L   +L   L+    I HV+ LR H+R P+  PQRI  +L+  LK+   P+Y+ 
Sbjct: 160 GGDPLMLEDDKLCAALEKFAAIGHVETLRIHTRTPVALPQRITGDLVVLLKKF-LPLYVN 218

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H NHP E +  A AA +RLA+AGI L SQ+VLL GINDD   +  LMR  + +R++PYY
Sbjct: 219 VHVNHPREITAPAEAACARLADAGIPLGSQTVLLAGINDDAITMEALMRALLRIRVRPYY 278

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
           LHHPD+  GT HFR  I  G  ++ SL  ++ G+  P Y++DLPGG GKV +    +   
Sbjct: 279 LHHPDVVKGTGHFRPPINRGLSVMRSLVGRVPGMAVPRYVIDLPGGGGKVPLLPDYVVSS 338

Query: 331 GNGSYCITDHHNIVHDYPPK 350
             G   + ++   V  YP K
Sbjct: 339 ETGHLVVKNYQGKVFVYPEK 358


>gi|253700443|ref|YP_003021632.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21]
 gi|251775293|gb|ACT17874.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21]
          Length = 344

 Score =  245 bits (626), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 125/315 (39%), Positives = 188/315 (59%), Gaps = 10/315 (3%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TS ++L     + + Q  +   +   Y + +TP    LI      DPI RQ +P   EL
Sbjct: 12  ITSPEELSG---LFRLQGRDFSPVVERYPMRITPYYLGLIEEQG--DPIWRQCVPDPAEL 66

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
              P +  DP+ +   SP+ G++HRYPDR++  +   C VYCRFC R+  VG      ++
Sbjct: 67  -CDPSQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGCAS---MA 122

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
               + A+AYI    +I +V+ +GGDPL+L    L  +L  L  I HV+I+R  SRVP+ 
Sbjct: 123 PARVDDAIAYIAGDQRIRDVVLSGGDPLLLPDDCLAGILSALSRIPHVEIVRIGSRVPVT 182

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P+RI P L + LK    PVY+  H NHP E + ++  A +RLA+AG+ L +Q+VLLKG+
Sbjct: 183 LPERITPGLARLLKRH-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTVLLKGV 241

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           NDDP+ + +LMR  + +R++PYY+H  DL  GT+HFR  + +G  ++ +L+   SGL  P
Sbjct: 242 NDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVAQGISVMQALRGHTSGLAVP 301

Query: 308 FYILDLPGGYGKVKI 322
            Y++DLPGG GKV +
Sbjct: 302 HYVIDLPGGKGKVDV 316


>gi|312126722|ref|YP_003991596.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776741|gb|ADQ06227.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 409

 Score =  245 bits (625), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 130/325 (40%), Positives = 208/325 (64%), Gaps = 11/325 (3%)

Query: 1   MQLRHKTLTSAQ---DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIA 57
            QL+++ +TSA+   DL N +  + +QI+++ +I   Y  A++P   +LI+P++PN PI 
Sbjct: 63  WQLKNR-ITSAKILKDLLNLDEKEAQQIEQVGKI---YRFAISPYYLSLIDPNDPNCPIK 118

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ +P   EL  + +   DP+ + + SP K +  RYPDR+++K+ ++C ++CRFC RR  
Sbjct: 119 RQSVPSSLEL--VEKGDLDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRF 176

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           +G +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I
Sbjct: 177 IG-ETDTHASLDDITDAIEYVAQNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEI 235

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+  PQRI  +L+  LK+   P+YI  H NHP E ++E+  A   LA++GI L
Sbjct: 236 IRIGTRAPVTLPQRITKDLVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPL 294

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q VLL G+N+D  ++  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ SL
Sbjct: 295 GNQMVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESL 354

Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
           + + SG+  P YI++ P G GK  I
Sbjct: 355 RGRTSGMAVPTYIINAPKGKGKTPI 379


>gi|325972392|ref|YP_004248583.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
 gi|324027630|gb|ADY14389.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
          Length = 421

 Score =  245 bits (625), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 121/322 (37%), Positives = 196/322 (60%), Gaps = 4/322 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H+ +T+  DL       + + + +K     +  ++TP   +LI+P++P   + R  
Sbjct: 70  WQLFHR-ITTYADLCRFLTPTESEREALKSADTLFPFSVTPYYLSLIDPNDPTSALRRTV 128

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  EE  +   E  DP+ + + + ++G+VHRYPDR+L      C  YCR+C R  MVG 
Sbjct: 129 IPSIEESYVGKGESADPLAEEHTTAVQGLVHRYPDRVLFLTTSFCSTYCRYCTRSRMVGG 188

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T    K  E A+ YI+E +++ +V+ +GGDPL LS + +  +L  +  I HV+++R 
Sbjct: 189 H--TEALQKHWEGAINYIKEHTEVRDVVISGGDPLTLSDEMIDYLLDQVTSIDHVEMVRI 246

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            ++VP+V PQRIN  L+  L++  KP+Y++IHA HP E ++E++ A + LA++G++L SQ
Sbjct: 247 GTKVPMVMPQRINESLLAILRKY-KPIYMSIHATHPDELTKESVRACNALADSGVVLGSQ 305

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+ND   +L +L    +  R+KPYYL   D  +G+ HFR T+++G+ ++  L+  
Sbjct: 306 TVLLKGVNDSVSVLTDLFHKLLRARVKPYYLFQCDPISGSEHFRTTVDKGKALMQGLRGF 365

Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
            SG   P Y++D PGG GKV I
Sbjct: 366 TSGYAIPQYVIDTPGGGGKVPI 387


>gi|118579512|ref|YP_900762.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus
           DSM 2379]
 gi|118502222|gb|ABK98704.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379]
          Length = 440

 Score =  245 bits (625), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 130/350 (37%), Positives = 204/350 (58%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            QLRH  + + + + L        E+  E++E  + + +++TP   +LI+  N   DP+ 
Sbjct: 29  WQLRHAIRDIATFERLLGIKF-DAERKRELEETIDKFPLSITPYYLSLIDRTNYAVDPVF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ  P  +EL +   E EDP+ ++  SP+ GI HRYPDR+L ++ ++C +YCR C R+  
Sbjct: 88  RQAFPSPDELQVTSCEHEDPLHEDADSPVPGITHRYPDRVLFQVSNICSMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    ++    +    L YI+    + +V+ +GGDPL+L    L  +L+ LR I HVQ+
Sbjct: 148 VGDVD-SIPGKDEIMLGLEYIRRTPVVRDVLLSGGDPLMLPDSHLDWILRELRAIPHVQV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR+P+V P RI P LI+ L     P+++  H NHP E +  A  A+SRLANAGI L
Sbjct: 207 IRIGSRMPVVLPYRITPGLIRVLSRY-HPLWLNTHFNHPREITTSAREALSRLANAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND P I+  LM+  VE R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 266 GNQTVLLAGVNDCPMIIKTLMQRLVENRVRPYYLYQCDLSEGLSHFRTPVGKGMEIMESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D PGG GK+ +  + +  +      + ++  ++  Y
Sbjct: 326 VGHTSGFAVPTYVIDAPGGGGKIPVMPNYLITLATNKVVLRNYEGVITTY 375


>gi|307298172|ref|ZP_07577976.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916258|gb|EFN46641.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 422

 Score =  245 bits (625), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 118/303 (38%), Positives = 188/303 (62%), Gaps = 2/303 (0%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           I +E+   + E      +++TP  A L++P+N   PI RQ +P  +EL I   +  DP+ 
Sbjct: 41  ITEEEAHGVAECLRTLRMSITPYYATLMDPNNQRCPIRRQAVPTDKELKIDKWDMIDPLH 100

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           ++  SP+ G+ HRYPDR+L  +   C +YCR C RR   G Q     + K+ + A+ YI+
Sbjct: 101 EDEDSPVPGLTHRYPDRVLFLITDQCSMYCRHCTRRRFAG-QLDRARTRKEIDDAIEYIR 159

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
           E  ++ +V+ +GGD L++    L+ +L  LR I HV+I+R  +R P+V PQR+ PEL++ 
Sbjct: 160 ETPEVRDVLLSGGDALLVGDDYLEYILNELREIPHVEIIRIGTRTPVVLPQRVTPELVKM 219

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           +++   PV+I  H NHP E + ++  A   LA+ GI L +QSVLL+G+ND P I+  L+ 
Sbjct: 220 IRKY-HPVWINTHFNHPLEITPDSTRACEMLADGGIPLGNQSVLLRGVNDSPYIMMELVH 278

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             V++R++PYY++  DL+ G  HFR +I +G  I+ SL    SGLC P +++D PGG GK
Sbjct: 279 QLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIGIMESLIGNTSGLCVPTFVVDAPGGGGK 338

Query: 320 VKI 322
           +++
Sbjct: 339 IRV 341


>gi|223940704|ref|ZP_03632543.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514]
 gi|223890631|gb|EEF57153.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514]
          Length = 412

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 123/313 (39%), Positives = 189/313 (60%), Gaps = 2/313 (0%)

Query: 36  SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95
           ++A+TP   NLI+P + N PI  Q IP+ +E +    E +DP G+++HSP+ G+VHRYPD
Sbjct: 81  ALAITPYFFNLIDPADENCPIRTQVIPKVQETHTASWEMDDPCGEDSHSPVPGLVHRYPD 140

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R+L  +   C  YCR+C R  +V +  G      + E  + YI++   + +V+ +GGDPL
Sbjct: 141 RVLFLVTDRCASYCRYCTRSRLVSNAAGYDFHP-EFEKQIEYIRKTPTVRDVLLSGGDPL 199

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
           +LS  +L+ +L  LR I HV+ LR  +R+PI  PQRI P L   LK+   P++I+IH NH
Sbjct: 200 LLSDDKLEYLLSQLRAIPHVEFLRIGTRIPIFLPQRITPALCAMLKKY-HPLFISIHTNH 258

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
           P E + E   A+ RLA AGI L +QSVLL+ +NDD   +  L++  +  R+KPYYL+  D
Sbjct: 259 PRELTTEVREALGRLAEAGIPLGNQSVLLRHVNDDLTTMRALVQKLLMCRVKPYYLYQCD 318

Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
           L AG++H R ++ +G +I+  L+   +G   P Y++D PGG GKV ++   +        
Sbjct: 319 LIAGSAHLRSSVRKGLEIMEGLRGHTTGYAIPQYVIDAPGGGGKVPVNPEYVLSRNADRV 378

Query: 336 CITDHHNIVHDYP 348
            I +    + +YP
Sbjct: 379 VIRNFEGKIFEYP 391


>gi|326203071|ref|ZP_08192937.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           papyrosolvens DSM 2782]
 gi|325986717|gb|EGD47547.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           papyrosolvens DSM 2782]
          Length = 425

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 130/344 (37%), Positives = 198/344 (57%), Gaps = 5/344 (1%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R  T+T  + + N  +   E+I  I++      +A+TP    L+NP +P  PI +Q +P 
Sbjct: 29  RITTITQLEQVVNLTV---EEIRGIEKCLKKLRMAITPYYVTLMNPEDPACPIRKQAVPT 85

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
             E  I   +  DP+ +   SP+ G+ HRYPDR LL +   C +YCR C RR   G+   
Sbjct: 86  INETYISTCDSSDPLHEGIDSPVNGLTHRYPDRALLLVTDQCSMYCRHCTRRRFAGNDDK 145

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
             LS  +   A+ YI+   QI +VI +GGD L +S++RL+ +LK+L+ I HV+++R  +R
Sbjct: 146 E-LSITNVNKAIEYIKNTKQIRDVILSGGDALCISNERLEYILKSLKAINHVEVIRIGTR 204

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+V PQRI PEL   LK+   P++I    NHP E + EAI A   L++AGI L +QSVL
Sbjct: 205 VPVVMPQRITPELCNMLKKY-HPLWINTQFNHPNELTPEAIKACEMLSDAGIPLGNQSVL 263

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L  IND P I+ NL++  V+ R++PYYL+  DL+ G  HFR  +  G +I+  L+   SG
Sbjct: 264 LSNINDCPYIMKNLVQGLVKSRVRPYYLYQCDLSEGIEHFRTPVTVGVEIIEMLRGHTSG 323

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
              P +++D PGG GK+ ++   +    N    + +   ++  Y
Sbjct: 324 FAVPTFVIDAPGGGGKIPVNPQYLLSQSNDKVILRNFEGVICSY 367


>gi|95930512|ref|ZP_01313247.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
 gi|95133347|gb|EAT15011.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
          Length = 437

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 121/322 (37%), Positives = 196/322 (60%), Gaps = 3/322 (0%)

Query: 27  EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
           +I++  + + +++TP   +LIN  +  NDP+ RQ  P  EEL +L  +  DP+ ++  SP
Sbjct: 57  KIEQTVDTFPLSITPYYLSLINTDDYANDPVFRQAFPVPEELQVLDHDMADPLAEDQDSP 116

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
             GI HRYPDR+L  + ++C +YCR C R+  VG Q  TV   ++ EA L YI+    + 
Sbjct: 117 APGITHRYPDRVLFHISNICSMYCRHCTRKRKVGDQD-TVPGREEIEAGLEYIRNNPVVR 175

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +V+ +GGDPL+LS   L  +L  L  I+HVQ++R  +R+P+V P RI  +L+  LK+   
Sbjct: 176 DVLLSGGDPLMLSDDHLDWILTELDQIEHVQVVRLGTRMPVVLPYRITDDLVAVLKKH-H 234

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           P+++  H NHP E +  +  A+ +LA+AGI L +QSVLL G+ND P I+  L+   V  R
Sbjct: 235 PIWVNTHFNHPREMTTSSKEAVRKLADAGIPLGNQSVLLAGVNDCPRIMKALVHKLVANR 294

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           ++PYYL+  DL+ G +HFR  + +G +I+ SL+   SG   P Y++D PGG GK+ ++ +
Sbjct: 295 VRPYYLYQCDLSEGLNHFRTPVGKGIEIMESLRGHTSGFSVPTYVVDAPGGGGKIPLNPN 354

Query: 326 NIKKVGNGSYCITDHHNIVHDY 347
            +  +      + ++  ++  Y
Sbjct: 355 YLVSLSTNKVVLRNYEGVITTY 376


>gi|146295299|ref|YP_001179070.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145408875|gb|ABP65879.1| glutamate 2,3-aminomutase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 407

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 129/346 (37%), Positives = 212/346 (61%), Gaps = 5/346 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +TSA+ L     + +++  +I+E++  Y  A++P   +LI+P +P+ PI +Q 
Sbjct: 63  WQLKNR-ITSAKILKELLNLDEKEAQQIEEVAKIYRFAISPYYLSLIDPSDPHCPIKKQS 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL  + +   DP+ + + SP K I  RYPDR+++K+ ++C ++CRFC RR ++G 
Sbjct: 122 VPSSFEL--IEKGELDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+R 
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQRI  EL+  LK+   P+Y+  H NHP E ++E+  A   LA+ GI L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYVNTHFNHPREITKESKRACEMLADGGIPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL G+N+D  ++  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKYVVRRLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
            SG+  P YI++ P G GK  I  + +   G G     +    V +
Sbjct: 358 TSGMAIPTYIINAPKGKGKTPIMPNYLLYFGKGKVVFRNWEGEVFE 403


>gi|222055869|ref|YP_002538231.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32]
 gi|221565158|gb|ACM21130.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32]
          Length = 347

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 193/321 (60%), Gaps = 16/321 (4%)

Query: 6   KTLTSAQD----LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           KT  +A D    L+N +       ++I +++  Y + +T     LI    P D I RQ I
Sbjct: 9   KTCVTAPDELSPLFNLD------TEDIAQVAKRYPMRITRYYLGLIE--RPGDAIWRQCI 60

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E      + EDP+ +   SP+ G++HRYPDR++  +  VC VYCRFC R+  VG  
Sbjct: 61  PDPLEFED-QAQMEDPLDEELLSPVPGLIHRYPDRVVWLVSSVCAVYCRFCMRKRRVGCT 119

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           + T   ++  +A LAYI    +I +VI +GGDP +L    L+++L  LR I HV+I+R  
Sbjct: 120 EATETGTR--QAVLAYIANHPEIRDVILSGGDPFLLEDDVLEEILSGLRQIHHVEIIRIG 177

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +R  +  P+RI   L + LK+   P+Y+  H NHP E +  +  A +RLA+AGI L +Q+
Sbjct: 178 TRTTVTLPERITTGLCRMLKKF-HPIYVNTHFNHPKEITAASARACARLADAGIPLGNQT 236

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKGINDDP+++  LM+  +++R+KPYYLH  DL  GT+HFR +I+ G +I+  L+   
Sbjct: 237 VLLKGINDDPQVMKRLMQLLLKIRVKPYYLHQMDLVRGTAHFRTSIDRGLQIMEGLRGHT 296

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
           SGL  P+Y +DL GG GKV +
Sbjct: 297 SGLASPYYAIDLEGGKGKVPL 317


>gi|222530236|ref|YP_002574118.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222457083|gb|ACM61345.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 407

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 207/324 (63%), Gaps = 9/324 (2%)

Query: 1   MQLRHKTLTSA--QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            QL+++  ++   +DL N +  + +QI+++ +I   Y  A++P   +LI+P++PN PI +
Sbjct: 63  WQLKNRIASAKILKDLLNLDEKEAQQIEQVGKI---YRFAISPYYLSLIDPNDPNCPIKK 119

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +P   EL  + +   DP+ + + SP K +  RYPDR+++K+ ++C ++CRFC RR ++
Sbjct: 120 QSVPSSLEL--IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLI 177

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+
Sbjct: 178 G-ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLEWILRSLRQIPHVEII 236

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  +R P+  PQRI  EL+  LK+   P+YI  H NHP E ++++  A   L++AG+ L 
Sbjct: 237 RIGTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKDSKRACEMLSDAGVPLG 295

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q VLL G+N+D  ++  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ SL+
Sbjct: 296 NQMVLLNGVNNDMYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLR 355

Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
            + SG+  P YI++ P G GK  I
Sbjct: 356 GRTSGMAVPTYIINAPKGKGKTPI 379


>gi|153004182|ref|YP_001378507.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152027755|gb|ABS25523.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 413

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 121/294 (41%), Positives = 177/294 (60%), Gaps = 2/294 (0%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           E    + + +TP  A L++P +P+ PI  Q +P   EL I P + EDP+ +    P+ GI
Sbjct: 95  ESDAEFHMGITPYYAALMDPDDPSCPIRLQSVPTMGELTIAPADLEDPLAEERDMPVPGI 154

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            HRYPDR+L    H CPVYCR C R+  V S   +  + +  E +LAYI    +I +V+ 
Sbjct: 155 THRYPDRVLFYTTHNCPVYCRHCTRKRKV-SDPTSAAAKRQIEESLAYISAHPEIRDVVI 213

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL LS +RL  +L  LR I HV+I R  +R  +  PQR+  + +  L+    PVY+
Sbjct: 214 SGGDPLSLSDERLDYILGRLRAIPHVEIFRLGTRNLVTLPQRVTDDFVHMLRRH-HPVYV 272

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
             H NHP E + EA  A  RLA+AG ++ +Q VLLKG+ND+PE++  L    + +RI+PY
Sbjct: 273 NTHFNHPKECTAEAFEAARRLADAGCVIGNQMVLLKGVNDEPELVKELNHKLLLMRIRPY 332

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           Y++  DLA G SHFR  +E G +I+  L+   SGL  P +++D P G GK+ ++
Sbjct: 333 YIYQCDLAKGISHFRTPVETGIRIIEHLRGHTSGLAVPHFVVDAPQGGGKIPVN 386


>gi|194333635|ref|YP_002015495.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris
           aestuarii DSM 271]
 gi|194311453|gb|ACF45848.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris
           aestuarii DSM 271]
          Length = 437

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 196/325 (60%), Gaps = 6/325 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+R+  + L + + L N  L   +Q +   E    + +++TP   +LIN  +  NDP+ 
Sbjct: 28  WQMRNSIRDLDTFETLLNITL-SPDQRNVFNETVKKFPMSITPYYLSLINTSDMENDPVF 86

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ +P   EL+I+  +  DP+ ++  SP   + HRYPDR+LL + + CP+YCR C R+  
Sbjct: 87  RQSVPSHHELDIMKGDMADPLHEDQDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG Q  T+ +       + YI+    I +V+ +GGDP +L    L  +L+ LR I+HV+I
Sbjct: 147 VGDQD-TIPTKTSISKGIDYIRSNPAIRDVLLSGGDPFLLPDDYLDWILEELRKIEHVEI 205

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V P RI PEL+Q L++  +PV++  H NH  E ++ A  A+S LA+ GI L
Sbjct: 206 IRIGTRTPVVLPYRITPELVQILRKH-QPVWVNTHFNHSREMTQSARNALSMLADGGIPL 264

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL GIND P I+  L+   V+ R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHQLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324

Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
               SG C P Y++D PGG GK+ +
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPV 349


>gi|169830385|ref|YP_001716367.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169637229|gb|ACA58735.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 420

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 195/315 (61%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +T+  +L N   +  E+   ++       +A+TP  A+L++P NP DPI +Q +P   EL
Sbjct: 30  VTTVDELRNLINLTPEEEQGVRRCLETLRMAITPYYASLMDPDNPEDPIRKQAVPLAAEL 89

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
                E  DP+ +   SP+ GI HRYPDR+LL L   C +YCR C RR + G +    L 
Sbjct: 90  QFGLAESRDPLAEEVDSPVPGITHRYPDRVLLLLTDQCAMYCRHCTRRRLAG-KTDRALP 148

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
               +AAL YI++ + I +V+ +GGD L+L+  RL  +L++LR I HV+I+R  +R P+V
Sbjct: 149 PARIKAALEYIRKTTAIRDVLLSGGDSLLLAEDRLGGILESLRAIDHVEIIRIGTRTPVV 208

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI PEL   L+    PVY+ +H NHP E + EA  A   LA+AG+ L +Q+VLL+G+
Sbjct: 209 LPQRITPELCALLRRF-HPVYVNMHFNHPKEVTPEAAEACRMLADAGLPLANQTVLLRGV 267

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND P ++ +LM + + +R++PYYL+  DL+ G  HFR T+ +G +I+  L+   SGL  P
Sbjct: 268 NDCPYVIKDLMHSLLRIRVRPYYLYQCDLSPGLEHFRTTVAQGIEIIELLRGHTSGLAVP 327

Query: 308 FYILDLPGGYGKVKI 322
            Y++D PGG GK+ +
Sbjct: 328 TYVVDAPGGGGKIPV 342


>gi|308273444|emb|CBX30046.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.]
          Length = 359

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/348 (38%), Positives = 206/348 (59%), Gaps = 15/348 (4%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L   ++T  ++L     + K +ID I E   +Y + + P   +LI   + N PI +Q +P
Sbjct: 22  LLQNSITKPEELIRILPVDKSKIDRIIE---YYPMRINPYYFSLIK--HKNCPIGKQAVP 76

Query: 63  ---QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
              + E++NIL +   DP+ +   SP+  ++HRYP R+L  +   C +YCRFC R+  VG
Sbjct: 77  DMQEIEDINILSDP--DPLCEEIQSPVPNLIHRYPGRVLFMVSAECAMYCRFCMRKRKVG 134

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                 ++ K     L YI+    I EV+ +GGDPL+L  +++ ++LK LR I H++ILR
Sbjct: 135 YNS---ITDKTITMGLEYIKNNKSICEVVISGGDPLLLEDEKIDRILKDLRAIDHIEILR 191

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+P   PQRI  +L+  L++   P++I IH NHP E +EEA  A S LA+AGI L  
Sbjct: 192 IHSRIPCTLPQRITKDLVDILRQY-HPLFINIHFNHPDEITEEAALACSALADAGIPLGC 250

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL GIN++ EI+  LM+  + +R+KPYY+H  D+  G  HF+ T++EG  I+ SL  
Sbjct: 251 QTVLLNGINNNAEIMKTLMKKLLMIRVKPYYIHQLDVVRGNHHFKATVKEGLNIMQSLY- 309

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             SGLC P Y++DLPGG GKV +     K   + S    ++ + + +Y
Sbjct: 310 GYSGLCVPQYMIDLPGGGGKVPLLPQYFKTFSDDSISFINYEDKLFEY 357


>gi|262197122|ref|YP_003268331.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
           DSM 14365]
 gi|262080469|gb|ACY16438.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
           DSM 14365]
          Length = 419

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 120/313 (38%), Positives = 186/313 (59%), Gaps = 3/313 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           LT+A++      +  E+   + + +  +    TP  A+L++P   + PI +Q IP + EL
Sbjct: 44  LTTAEEFARVVELSDEERAALVDTAPMFRTGATPYYASLMDPARADCPIRKQAIPSRREL 103

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +  PEE  DP+G+++ SP   +VH+YPDR+LL +L  C +YCR C RR +VG       +
Sbjct: 104 DFAPEELRDPLGEDSQSPAPCVVHKYPDRVLLLVLDRCAIYCRHCNRRRLVGGDAPP--A 161

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             D +A + YI    QI +V+ +GGDPL+LS+ RL  +L  LR I+HV+I+R  +R+P+V
Sbjct: 162 RDDIDAGIDYIARTPQIRDVLLSGGDPLLLSNARLAHILGRLRAIEHVEIIRIGTRLPVV 221

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P RI+ EL   L+    P+YI  H NHP E + EA AA  RL ++GI + +Q+VLL+G+
Sbjct: 222 LPMRIDDELCATLRRF-HPLYINTHFNHPKEITSEARAACERLVDSGIPVGNQAVLLRGV 280

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           N     +  LMR  + +R++PYYL   D   GT H R  ++    ++  L+   SG+  P
Sbjct: 281 NSSVRCIRALMRALLRMRVRPYYLFQGDTVLGTDHMRTPVDAAIALMEGLRGWTSGMAIP 340

Query: 308 FYILDLPGGYGKV 320
             ++D PGG GK+
Sbjct: 341 HMVIDAPGGGGKL 353


>gi|158319469|ref|YP_001511976.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158139668|gb|ABW17980.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 416

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 119/315 (37%), Positives = 197/315 (62%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +T+ +DL     +  E+   IKE      + +TP  A+L++  +PN P+ +Q +P   EL
Sbjct: 29  ITNVEDLKKVINLTDEEEKGIKECLKTLRMGITPYYASLMDKDDPNCPVRKQAVPIMTEL 88

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +    + +DP+ ++  SP+ G+ HRYP+R+LL +  +C +YCR C RR   G Q  T + 
Sbjct: 89  HKSDADMDDPLHEDADSPVPGLTHRYPNRVLLLITDMCSMYCRHCTRRRFAG-QNDTAMP 147

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
               +AA+ YI+   ++ +V+ +GGD L++S ++L+ ++  LR I+HV+I+R  SR P+V
Sbjct: 148 MDRIDAAIEYIRRTPEVRDVLLSGGDCLLVSDEKLEYIISKLREIEHVEIIRLGSRTPVV 207

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI PEL+  LK+   P+++  H NHP E +EE   A++ LA+AGI L +QSVLL+G+
Sbjct: 208 MPQRITPELVGMLKKY-HPIWLNTHFNHPKELTEETKRALTLLADAGIPLGNQSVLLRGV 266

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   I+ +L+   V+ R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   P
Sbjct: 267 NDCVHIMRDLVHGLVKNRVRPYYIYQCDLSMGIEHFRTPVSKGIEIIEGLRGHTSGYAVP 326

Query: 308 FYILDLPGGYGKVKI 322
            +++D PGG GK+ +
Sbjct: 327 TFVVDAPGGGGKIPV 341


>gi|320334582|ref|YP_004171293.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211]
 gi|319755871|gb|ADV67628.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211]
          Length = 473

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 119/313 (38%), Positives = 182/313 (58%), Gaps = 2/313 (0%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           + + +TP  A+L++P +P  P+ RQ IP   EL       ED + ++ HSP+ G+VHRYP
Sbjct: 69  FRLDITPYFASLMDPEDPTCPVRRQVIPTHHELENFTSMMEDSLAEDKHSPVPGLVHRYP 128

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           DR+L+ +   C  YCR+C R  +VG    T     + +  L Y++   Q+ +V+ +GGDP
Sbjct: 129 DRVLMLVTTQCASYCRYCTRSRIVGDPTET-FKPDEYKLQLEYLRNTPQVRDVLLSGGDP 187

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L L+ K L  +L  LR I H++I+R  +RVP+  P R+  EL   L E   PV++ IH N
Sbjct: 188 LTLAPKVLGGLLAELRKIPHIEIIRIGTRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVN 246

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           HP E + E   A  RL  AG+ L +Q+VLL+G+ND P I+  LMR  V++R++PYY++  
Sbjct: 247 HPKEITPEVAEACDRLTRAGVPLGNQAVLLRGVNDHPVIMQKLMRELVKIRVRPYYIYQC 306

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
           DL  G  H R T+ +G +I+ SL+   SG   P Y++D PGG GK+ +  + +   G G 
Sbjct: 307 DLVHGAGHLRTTVAKGLEIMESLRGHTSGYSIPTYVVDAPGGGGKIPVMPNYVLAQGGGK 366

Query: 335 YCITDHHNIVHDY 347
             + +    +  Y
Sbjct: 367 VILRNFEGYIAAY 379


>gi|51246011|ref|YP_065895.1| L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54]
 gi|50877048|emb|CAG36888.1| probable L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54]
          Length = 439

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 124/322 (38%), Positives = 194/322 (60%), Gaps = 3/322 (0%)

Query: 27  EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
           +IKE    + +++TP   +LIN  +  NDPI  Q  P  +EL+I P + EDP+ ++  SP
Sbjct: 57  KIKETLRKFPLSITPYYLSLINSEDYSNDPIFIQSFPSPKELDISPHDMEDPLAEDKDSP 116

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           +  I HRYPDR+LL++ + C +YCR C R+  VG      L  ++    + YI++   I 
Sbjct: 117 VPNITHRYPDRVLLQVSNTCAMYCRHCTRKRKVGDVDSIPLK-QEILNGIEYIRQTPVIR 175

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +V+ +GGDPL+LS   L  +L  LR I HVQ++R  SR+P+V P R+   L+  LK+   
Sbjct: 176 DVLLSGGDPLMLSDDYLDWILSELRTIPHVQVIRIGSRMPVVLPYRVTDSLVAMLKKH-H 234

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           P+++  H NHP E +     A+++LANAGI L +QSVLL G+ND P I+ +L+   VE R
Sbjct: 235 PLWVNTHFNHPREVTASTREALAKLANAGIPLGNQSVLLAGVNDCPRIMKSLVHKLVENR 294

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           ++PYYL+  DLA G +HFR  + +G +I+ SL+   SG   P Y++D PGG GK+ ++ +
Sbjct: 295 VRPYYLYQCDLAEGLNHFRTPVGKGIEILESLRGHTSGFAVPTYVVDAPGGGGKIPLNPN 354

Query: 326 NIKKVGNGSYCITDHHNIVHDY 347
            +         + ++  ++  Y
Sbjct: 355 YLVSFSTNKVILRNYEGVITTY 376


>gi|150392234|ref|YP_001322283.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149952096|gb|ABR50624.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 414

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 124/341 (36%), Positives = 204/341 (59%), Gaps = 4/341 (1%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           + + +DL     +  ++ + I+E      + +TP  A+L++  + N P+  Q +P   EL
Sbjct: 29  IATVEDLKKVIDLTSQEEEAIEECLQTLRMGITPYYASLMDKEDSNCPVRMQAVPIMSEL 88

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-KGTVL 126
           ++   + +DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   G Q  G  L
Sbjct: 89  SMGSADMDDPLHEDVDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQQDSGMPL 148

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
              D  AA+ YI +  QI +V+ +GGD L+ S +RL+ ++  LR I+HV+I+R  SRVP+
Sbjct: 149 DRID--AAIDYIAKTPQIRDVLLSGGDCLLASDERLEYIISKLRAIEHVEIIRLGSRVPV 206

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI P L+  LK+   P+++  H NH  E ++E+  AI  LANAGI L +QSVLLKG
Sbjct: 207 VMPQRITPSLVNMLKKY-HPIWLNTHFNHSKEITKESKEAIELLANAGIPLGNQSVLLKG 265

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND   I+ +L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 266 VNDCVHIMRDLVHDMVKMRVRPYYIYQCDLSRGIEHFRTPVAKGIEIIEGLRGHTSGYAV 325

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           P +++D PGG GK+ +  + +    N    + ++  ++  Y
Sbjct: 326 PTFVVDAPGGGGKIPVMPNYVLSQSNNKVVLRNYEGVITTY 366


>gi|294101198|ref|YP_003553056.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium
           colombiense DSM 12261]
 gi|293616178|gb|ADE56332.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium
           colombiense DSM 12261]
          Length = 433

 Score =  242 bits (618), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 128/315 (40%), Positives = 194/315 (61%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +T A+ L     + K ++  IK   N   +A+TP  A+LIN ++P+ PI +Q IP  +E 
Sbjct: 34  ITEAKHLEQVVDLTKSELAMIKRSLNVLRMAITPYFASLINRNDPSCPIRKQCIPTLQET 93

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
            I+  ++ DP+ +   SP+ G+ HRYPDR LL +   C +YCR C RR   G Q     S
Sbjct: 94  LIVQSDQLDPLHEEVDSPVPGLTHRYPDRCLLLVTDQCSMYCRHCTRRRFAG-QTDLPRS 152

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
            K+ EA + YI++   I +V+ +GGDPL LS  R++ +L+ +R I HV+I+R  +RVP+V
Sbjct: 153 EKEIEACIDYIRKTPVIRDVLISGGDPLTLSDDRIEGILREIRAIPHVEIIRIGTRVPVV 212

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P RI   L   LK+   P+++ +  NHP E + E+  A  +LANAGI L +QSVLLKGI
Sbjct: 213 MPMRITDNLCSMLKKY-HPLWMNLQFNHPREITPESADACQKLANAGIPLGNQSVLLKGI 271

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND P I   L +  +++R++PYY++  DL+ G  HFR +I +G +I+  L+   SGL  P
Sbjct: 272 NDCPYIFRELNQQLLKIRVRPYYIYQCDLSQGIEHFRTSIGKGVEIMEFLRGHTSGLAVP 331

Query: 308 FYILDLPGGYGKVKI 322
            +++D PGG GK+ +
Sbjct: 332 TFVVDAPGGGGKIPV 346


>gi|309389800|gb|ADO77680.1| L-lysine 2,3-aminomutase [Halanaerobium praevalens DSM 2228]
          Length = 419

 Score =  241 bits (616), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 111/288 (38%), Positives = 182/288 (63%), Gaps = 2/288 (0%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           + + +TP  A L++  + N P+  Q +P   E ++   + EDP+ ++  SP+ GI HRYP
Sbjct: 61  FRMGITPYYATLMDADDHNCPVRMQAVPDIMETHLSGSDMEDPLHEDGDSPVDGITHRYP 120

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           DR+L  +   C +YCR C RR   G Q  + +  +  +  L Y++   Q+ +V+ +GGD 
Sbjct: 121 DRVLFLITDQCSMYCRHCTRRRFAG-QNDSGVPMERIDKCLEYVRNTPQVRDVLLSGGDC 179

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L++S  +L+ ++K L  I HV+++R  SR P+V PQRI  +L+  LK+   P+++  H N
Sbjct: 180 LLISDDKLEYIIKELSEIDHVEVIRLGSRTPVVMPQRITDDLVNMLKKY-HPIWLNTHFN 238

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           HP E ++EA  A ++LANAGI L +QSVL++GIND  E++ +L++  V++R++PYY++  
Sbjct: 239 HPKEITKEAAEACAKLANAGIPLGNQSVLMRGINDSSEVMMDLVQKLVQIRVRPYYIYQC 298

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           DL+ G  HFR  + +G +I+ SL+   SG C P Y++D PGG GK  +
Sbjct: 299 DLSMGIEHFRTKVSKGLEIMESLRGHTSGYCVPTYVIDAPGGGGKTPV 346


>gi|258513921|ref|YP_003190143.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257777626|gb|ACV61520.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 427

 Score =  241 bits (614), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 127/322 (39%), Positives = 198/322 (61%), Gaps = 3/322 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLR++ ++S +    ANL   E+   I++  + + +A+TP  A+LIN  +   PI  Q 
Sbjct: 21  WQLRNRIMSSDELDQYANLSVYEKA-SIQKAIDVFPMAITPYYASLINKDDSTCPIRMQC 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +EL     + +DP+ ++  SP  G+ HRYPDR+LL + + C +YCR C R+  VG 
Sbjct: 80  IPNPKELIKGSGDMDDPLHEDGDSPCPGLTHRYPDRVLLLVTNECSMYCRHCTRKRKVGD 139

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +  V    D   A+ YI+    I +V+ +GGDP +LS  RL+++++ +R I HVQ++R 
Sbjct: 140 NE-KVSKDSDIIKAIEYIKAHPDIRDVLLSGGDPFVLSTNRLEQIIRRVREIPHVQVIRI 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L++ LK+   P++I  H NHP EF+EE+  A+++LA+AGI L +Q
Sbjct: 199 GTRTPVVMPQRITDHLVKMLKKY-HPIWINTHFNHPREFTEESARALAKLADAGIPLGNQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGIND   I+  L    V  R++PYYL+  DL+ G  HFR  + +G +I+ +L   
Sbjct: 258 TVLLKGINDCAFIIKKLAHLLVSNRVRPYYLYQCDLSRGIEHFRTPVSKGVEIMEALIGH 317

Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
            SG   P +++D PGG GK+ +
Sbjct: 318 TSGFAVPTFVVDAPGGGGKIPV 339


>gi|189500579|ref|YP_001960049.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
           phaeobacteroides BS1]
 gi|189496020|gb|ACE04568.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
           phaeobacteroides BS1]
          Length = 437

 Score =  241 bits (614), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 128/350 (36%), Positives = 205/350 (58%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+RH  K L + + L +  L +K++     + +  + I++TP   +LIN  +  NDP+ 
Sbjct: 28  WQMRHSIKDLETFEALLDVKLSEKQR-KAFGKAAEKFPISITPYYLSLINTEDMENDPVF 86

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q +P   ELNI+  +  DP+ +++ SP   + HRYPDR+LL + +VCP+YCR C R+  
Sbjct: 87  LQSVPSPLELNIVKGDMSDPLHEDSDSPAPCVTHRYPDRVLLLVSNVCPMYCRHCTRKRK 146

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG +  T+      E  + YI+   QI +V+ +GGDP +LS   L  +L  LR I+HV+I
Sbjct: 147 VGDED-TIPKRSAIEQGIRYIRNNPQIRDVLLSGGDPFLLSDDYLDWILSELRKIEHVEI 205

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V P RI  +L+  LK+  +PV++  H NH  E ++ A  A+  LA+ G+ L
Sbjct: 206 IRIGTRTPVVLPCRITSDLVAILKKH-QPVWVNTHFNHSREITQSARNALGMLADGGVPL 264

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL GIND P I+  L+   V+ R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG C P Y++D PGG GK+ +  + +         + ++  ++  Y
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTY 374


>gi|159906176|ref|YP_001549838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C6]
 gi|159887669|gb|ABX02606.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C6]
          Length = 433

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/343 (37%), Positives = 209/343 (60%), Gaps = 4/343 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIARQFIPQK 64
           K + + +     NL + E+  EI++    + +++TP  A+LI+  N + DPI +Q +   
Sbjct: 37  KDVDTLEKFLGINLDEGEK-REIQKAIEVFPMSITPYYASLIDTENLDKDPIYKQSVASS 95

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           +EL +   E EDP+ +++ SP+ GI HRYPDR+L  +   C +YCR C R+  V S+K +
Sbjct: 96  KELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPSCAMYCRHCTRKRKV-SEKSS 154

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
             S ++ + A+ YI+   +I +V+ +GGDPL+LS + L  +L  +  IKHV+++R  SRV
Sbjct: 155 NPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVELIRIGSRV 214

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V PQRI   L+  LK+   P++I  H NHP E ++E+  A+ +L+NAGI L +Q+VLL
Sbjct: 215 PVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVELTKESKVALDKLSNAGIPLGNQTVLL 273

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
            G+ND P ++  L +  V  R++PYYL+  DL+ G SHFR  + +G +I+ SL    +G 
Sbjct: 274 AGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESLIGHTTGF 333

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             P Y++D PGG GK+ +  + I   G+    + ++  I+  Y
Sbjct: 334 AVPRYVVDAPGGGGKIPVMPNYIVSWGSDRVILRNYEGIITTY 376


>gi|116329760|ref|YP_799479.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116122653|gb|ABJ80546.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 370

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/347 (38%), Positives = 195/347 (56%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++  T  Q   +  L +KE +   +  S  +  ++TP   NL +  +PN PI  Q 
Sbjct: 24  WQIQNRIKTQTQLSEHIELTEKETLS-FEACSEFFEFSVTPYYLNLADTKDPNCPIRLQI 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P + EL     ER+DP+ +  H P+KG+ HRYPDR L  L HVC VYCRFC R+  V  
Sbjct: 83  VPHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSK 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T    ++ + AL Y +   +I EVI +GGDPL LS ++L  +L  L+ I H+  +R 
Sbjct: 143 SVHTP-GKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
           HSR P+  P RI+  L    K+   P+Y+  H NHP E +      IS L   G +I+L+
Sbjct: 202 HSRYPVTLPMRIDSSLCSVFKKHF-PIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLN 260

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLKGIND  E L  L      + IKPYYLH  D   G+  FR+ IE G +I+  ++ 
Sbjct: 261 QSVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRG 320

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
           +ISGL  P Y++DL GG GKV + T  +    + SY + ++ + +++
Sbjct: 321 RISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYILRNYQDELYE 367


>gi|319782550|ref|YP_004142026.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317168438|gb|ADV11976.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 370

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 129/280 (46%), Positives = 174/280 (62%), Gaps = 5/280 (1%)

Query: 45  NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
           +LI+ ++P DPI  Q IP  +EL     E +DPI D++ SP+  + HR+ DR+LL   + 
Sbjct: 63  DLIDWNDPADPIRAQVIPSPQELEEAEGELDDPIADHDFSPVPRLTHRHADRVLLFPTYQ 122

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C VYCRFCFR+E + S  G   + +  E ALAYI +  +I EVI TGGDPL L  K L +
Sbjct: 123 CAVYCRFCFRKESLTS-IGRGYTREALEPALAYIADHPEIREVILTGGDPLSLPEKALAE 181

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEA 223
           +   +  I HV++LR H+RVP+  P RI P L+  L+  G+  V I  H NH  E ++  
Sbjct: 182 IRARIEAIAHVRLLRIHTRVPVALPSRITPGLVAALQ--GRLMVTIVTHFNHAREITQAT 239

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSH 282
             A   L  AG +LL+QSVLLKG+ND  E L  L R  +  L +KPYYLHH DLA G +H
Sbjct: 240 ETACRTLRQAGFVLLNQSVLLKGVNDSVEALEELCRELMYRLGVKPYYLHHGDLARGMAH 299

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            R TI +GQ +  +L+ ++SG+C P Y+LDLP G GKV I
Sbjct: 300 RRTTIAQGQALAEALRARLSGICNPVYVLDLPEGGGKVPI 339


>gi|310780280|ref|YP_003968612.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter
           polytropus DSM 2926]
 gi|309749603|gb|ADO84264.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter
           polytropus DSM 2926]
          Length = 716

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 131/326 (40%), Positives = 200/326 (61%), Gaps = 8/326 (2%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            QL+H  K + + + +++  L  K++    K I   +  A TP   +LI+  +  NDP+ 
Sbjct: 28  WQLKHSIKDIETLESVFDVELDAKDKKSMQKTIE-QFPFAATPYYLSLIDIGDYKNDPVY 86

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q +P  EELN+   +  DP+ +++ SP+ GI HRYPDR+LL + +VC +YCR C R+  
Sbjct: 87  KQAVPDIEELNLTNCDMSDPLHEDHDSPVPGITHRYPDRVLLLVSNVCSMYCRHCTRKRK 146

Query: 118 VGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
           VG      +  K+T    + YI+  ++I +V+ +GGDP +LS   L  +L  ++ I HV+
Sbjct: 147 VGDMDN--IPDKETIMNGIEYIKSHTEIRDVLLSGGDPFLLSDDYLDWILSEVKKIPHVE 204

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           ++R  +R P+V PQRI   LI  LK+   P++I  H NHP EF+EE+  +ISRLA+AGI 
Sbjct: 205 VIRIGTRTPVVLPQRITDNLINVLKKH-HPIWINTHFNHPKEFTEESKKSISRLADAGIP 263

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           L +QSVLL  +ND P+I+  L+   V  RI+PYYL+  DL+ G SHFR  + +G +I+ S
Sbjct: 264 LGNQSVLLSRVNDCPKIMKKLVHNLVANRIRPYYLYQCDLSEGLSHFRTPVGKGIEIIES 323

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
           L    SG   P Y++D PGG GK+ +
Sbjct: 324 LIGHTSGFAIPRYVIDAPGGGGKIPV 349


>gi|283781148|ref|YP_003371903.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
           6068]
 gi|283439601|gb|ADB18043.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
           6068]
          Length = 436

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 117/313 (37%), Positives = 191/313 (61%), Gaps = 4/313 (1%)

Query: 37  IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           + +TP   +L++  + N P+ R  +P   E    P E +DP+G++ HSP  G+VHRYPDR
Sbjct: 123 VGITPYYMSLLDREDANQPLRRTVVPVTGEFLRTPGEADDPLGEDGHSPTPGLVHRYPDR 182

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPL 155
           +LL  L  C  YCR+C R  +VG   G ++ S+   E A  YI++   I +V+ +GGDPL
Sbjct: 183 VLLLALDFCSTYCRYCTRSRVVG--HGEIMPSEQRLEKAFEYIRQTPTIRDVLISGGDPL 240

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
            LS  +L  +L  LR I H++ +R  +++P V PQRI P+LI+  K+   P++++IH  H
Sbjct: 241 ALSEDKLDWILGRLRSIPHLEFVRIGTKMPAVLPQRITPQLIRVFKKY-SPLWMSIHFLH 299

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
           P E + EA  A +RLA+AGI L SQ+VLLKG+ND  + + +L+   + +R++PYY++  D
Sbjct: 300 PDECTPEANQACARLADAGIPLGSQTVLLKGVNDRVDTMKDLVHRLLMMRVRPYYIYQCD 359

Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
             +G++HFR ++ +G +I+  L+   +G   P Y++D PGG GK+ +  + +        
Sbjct: 360 PISGSAHFRTSVSKGLEIIEGLRGHTTGYAVPTYVIDAPGGGGKIPLQPNYVVGRDGNDL 419

Query: 336 CITDHHNIVHDYP 348
            + ++   V+ YP
Sbjct: 420 LLRNYEGQVYRYP 432


>gi|154686384|ref|YP_001421545.1| hypothetical protein RBAM_019520 [Bacillus amyloliquefaciens FZB42]
 gi|154352235|gb|ABS74314.1| KamA [Bacillus amyloliquefaciens FZB42]
          Length = 473

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 122/348 (35%), Positives = 205/348 (58%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +E+ + ++       + +TP  A+L++P NP  PI  Q 
Sbjct: 31  WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++I+R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L + LK+   PV++  H N   E +EE++AA  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIELTEESVAACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            +G   P +++D PGG GK+ +  + +         I +   ++  YP
Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYP 375


>gi|116332642|ref|YP_802359.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116127509|gb|ABJ77601.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 370

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/347 (38%), Positives = 194/347 (55%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++  T  Q   +  L +KE +   +  S  +  ++TP   NL +  +PN PI  Q 
Sbjct: 24  WQIQNRIKTQTQLSEHIELTEKETLS-FEACSEFFEFSVTPYYLNLADTKDPNCPIRLQI 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P + EL     ER+DP+ +  H P+KG+ HRYPDR L  L HVC VYCRFC R+  V  
Sbjct: 83  VPHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSK 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T    ++ + AL Y +   +I EVI +GGDPL LS ++L  +L  L+ I H+  +R 
Sbjct: 143 SVHTP-GKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
           HSR P+  P RI+  L    K+   P+Y+  H NHP E +      IS L   G +I+L+
Sbjct: 202 HSRYPVTLPMRIDSSLCSVFKKHF-PIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLN 260

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLKGIND  E L  L      + IKPYYLH  D   G+  FR+ IE G +I+  ++ 
Sbjct: 261 QSVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRG 320

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
           +ISGL  P Y++DL GG GKV + T  +    + SY   ++ + +++
Sbjct: 321 RISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYIFRNYQDELYE 367


>gi|270307638|ref|YP_003329696.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family
           [Dehalococcoides sp. VS]
 gi|270153530|gb|ACZ61368.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family
           [Dehalococcoides sp. VS]
          Length = 730

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/353 (37%), Positives = 203/353 (57%), Gaps = 11/353 (3%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
           K L + + L        E+   +++   ++ +++TP   +LI+P N  NDP+  Q +P  
Sbjct: 48  KDLATVEKLLGVKF-SAEKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVFIQSVPSA 106

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            ELN    ++EDP+ ++  SP  GI HRYPDR+L  + + C +YCR C R+  VG    T
Sbjct: 107 AELNFSCHDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDVDKT 166

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            LS  D    L YI+   Q+ +V+ +GGDPL+LS   L+ +L  L+ I HVQ++R  +RV
Sbjct: 167 -LSRDDLVKGLEYIKNTPQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQVIRIGTRV 225

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V PQRI P L++ +K+   PV+I  H NHP E +  +I A+  LA+AGI L +Q+VLL
Sbjct: 226 PVVLPQRITPHLVKIIKKY-HPVWINTHFNHPREITATSIRALRLLADAGIPLGNQTVLL 284

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
             +ND P ++  L+   VE R++PYYL+  D A G SHFR +I +G +I+ +L    SG 
Sbjct: 285 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 344

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
             P Y++D P G GK+ I  + +    +    + ++  I+  Y       PPK
Sbjct: 345 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397


>gi|194016677|ref|ZP_03055290.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061]
 gi|194011283|gb|EDW20852.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061]
          Length = 466

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 124/348 (35%), Positives = 205/348 (58%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ + +DL     + +E+ + +K  +    + +TP  A+L+NP +P  P+  Q 
Sbjct: 31  WQLTH-TVKTLEDLEKVVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL+    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+ YI+E  ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  EL + LK+   PV++  H N   E ++EA  A  RL NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG   P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 328 TSGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYP 375


>gi|268315713|ref|YP_003289432.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus
           DSM 4252]
 gi|262333247|gb|ACY47044.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus
           DSM 4252]
          Length = 396

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 197/339 (58%), Gaps = 6/339 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+RH+ + +A++L     +  E+   I+     +   +TP  A+L++P +PN PI RQ 
Sbjct: 18  WQMRHR-IHTAEELSRWIRLTDEERRAIEATRGVFRWNITPYYASLMDPEDPNCPIRRQV 76

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P+ EEL        DP+ +  HSP+K ++H Y DR+   +   C +YCR+C R+ MVG 
Sbjct: 77  VPRLEELAPDLIGVMDPLEEVAHSPVKNLIHNYRDRVAFCVTSECAIYCRYCLRKRMVGD 136

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
               ++   + +AA+ YI    +I +V+ TGGDPL LS   L  +L  LR I HV+I+R 
Sbjct: 137 -AAFMMRKAELQAAIDYIAAHPEIRDVLLTGGDPLTLSETHLAWILDQLRAIPHVEIIRI 195

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R+P+  P RI PEL + L E   P++I  H NHP E + +A  AI RL  AGI + +Q
Sbjct: 196 GTRMPVKLPYRITPELCRLL-ERYHPLWINTHFNHPKELTPDAAEAIDRLLRAGIPVGNQ 254

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GINDD   +  L    V +R++PYYL+   L  GT+HFR  IE+G  I+ +L+ +
Sbjct: 255 TVLLRGINDDVATMKALCEGLVRMRVRPYYLYQAQLIGGTAHFRTPIEKGMAIMRALQGR 314

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
            +G   P Y+LD P  YGKV +D   ++    G Y I +
Sbjct: 315 TTGFAIPKYVLDTP--YGKVPLDGSYVRGRA-GDYVIVE 350


>gi|308173939|ref|YP_003920644.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7]
 gi|307606803|emb|CBI43174.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7]
          Length = 473

 Score =  239 bits (611), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 123/348 (35%), Positives = 204/348 (58%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +E+ + ++       + +TP  A+L++P NP  PI  Q 
Sbjct: 31  WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++I+R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R PIV PQRI   L Q LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPIVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            +G   P +++D PGG GK+ +  + +         I +   ++  YP
Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYP 375


>gi|300088094|ref|YP_003758616.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527827|gb|ADJ26295.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 431

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 126/322 (39%), Positives = 192/322 (59%), Gaps = 4/322 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH+ +T+ ++L     +   +   IK ++  + +A+TP   +LINP +  DPI RQ 
Sbjct: 51  WQFRHR-ITTVEELSRYLPLSVRERTRIKLVTAEFPMAITPYYLSLINPADAKDPIRRQA 109

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL      REDP+ +++HS + G+VHRYPDR L+ L  +CP+ CR C R+     
Sbjct: 110 VPSVHELT-GEAGREDPLEEHSHSVVPGLVHRYPDRALMVLTDICPMLCRHCTRKRE-WR 167

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           + G V +S   +A + YI    Q+ ++I +GGDPL LS +RL++VL  LR I HV+I+R 
Sbjct: 168 KGGWVQNSTRVKAMVDYIGRTPQVRDIIISGGDPLTLSTRRLEEVLAALRAIPHVEIIRI 227

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R+P+V PQRI+ EL + L +   P+++  H NHP E + EA AA  RL  AG+ + +Q
Sbjct: 228 GTRLPVVLPQRIDVELCRMLSKY-SPIWVNTHFNHPGEITPEAAAACDRLLRAGVQVNNQ 286

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND      NL  + +   ++PYYL   D   GT H    +E G +I+  ++  
Sbjct: 287 SVLLRGVNDTVATQLNLCHSLLRAMVRPYYLFQCDQVRGTEHLWTPVETGLRIIEGMRGH 346

Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
            SGL  P Y++DLP G GK+ +
Sbjct: 347 TSGLAIPNYVIDLPDGRGKIPL 368


>gi|124514855|gb|EAY56366.1| Lysine 2,3-aminomutase [Leptospirillum rubarum]
          Length = 383

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 124/328 (37%), Positives = 200/328 (60%), Gaps = 7/328 (2%)

Query: 22  KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81
           KE + + +E+   + I +     +LI   +P  PI RQ IP  EE+    +   DP+G++
Sbjct: 26  KEGVGQ-REVEKTFPIRINAYYRSLIT--DPEGPIGRQVIPDPEEVLDF-DSPVDPLGED 81

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           + SP+  IVHRYPDR+L  + + CP+YCR+C R+ M+G+ +G V++  + E  + YI+  
Sbjct: 82  SDSPVPAIVHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEG-VVTRGEVEEGIEYIRTH 140

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
            ++ +VI +GGDPL+L    L+ +L  LR I H++++R  SRVP   PQR+ PEL   LK
Sbjct: 141 PEVRDVILSGGDPLMLKDDYLEFILSGLRKIPHLEVIRIGSRVPSSLPQRVTPELCAMLK 200

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           +   P+++ +H NHP E + E+  A + LA+AGI L  Q+VL+KG+ND+  IL  L +  
Sbjct: 201 KY-HPLFMNLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKL 259

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
           + +R+KPYYL+  DL  G +HFR  +  G +I+  L+   SG+  P +++D PGG GKV 
Sbjct: 260 LTIRVKPYYLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVP 319

Query: 322 IDTHN-IKKVGNGSYCITDHHNIVHDYP 348
           I   + +  + +G   + ++   V+ YP
Sbjct: 320 ILPPDYLVSMEDGDVVLRNYEGNVYTYP 347


>gi|188586500|ref|YP_001918045.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179351187|gb|ACB85457.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 420

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 127/348 (36%), Positives = 206/348 (59%), Gaps = 5/348 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL ++ +T  + L     + +E+ + IK+      +A+TP  A+L++  +P+ PI R  
Sbjct: 25  WQLNNR-ITDVESLKEIINLTEEEEEGIKQTLKTIRMAITPYYASLMDKDDPSCPIRRHA 83

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   ELN    + EDP+ +++ SP++GI HRYPDR+L  +   C +YCR C RR + GS
Sbjct: 84  VPSSLELNFSEFDLEDPLSEDSDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRLAGS 143

Query: 121 -QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             K   +   D   A+ YI+   Q+ +V+ +GGD L++S +RL+ +L  L  I+HV+I+R
Sbjct: 144 TDKAAPIEVID--KAIDYIKNTPQVRDVLISGGDGLLISDERLEYILNELYKIEHVEIVR 201

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             +R P+V PQRI   LI  LK+   P+++  H NHP E + EA  A+++LA+AGI L +
Sbjct: 202 IGTRAPVVLPQRITDNLISILKKY-HPIWLNTHFNHPKEITSEAKEALAKLADAGIPLGN 260

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+GIND P  +  L+   V+ R++PYY++  DL+ G  HFR ++  G +I+ SL+ 
Sbjct: 261 QSVLLRGINDCPVTMKELVHELVKNRVRPYYIYQCDLSQGIEHFRTSVSAGLEIIESLRG 320

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             SG   P +++D PGG GK  +    +      S  + ++  ++  Y
Sbjct: 321 HTSGYAVPTFVVDAPGGGGKTPVMPQYLISQSPDSVVLRNYEGVISKY 368


>gi|157692660|ref|YP_001487122.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032]
 gi|157681418|gb|ABV62562.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032]
          Length = 466

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 124/348 (35%), Positives = 205/348 (58%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ + +DL     + +E+ + +K  +    + +TP  A+L+NP +P  P+  Q 
Sbjct: 31  WQLTH-TVKTLEDLEKIVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL+    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+ YI+E  ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  EL + LK+   PV++  H N   E ++EA  A  RL NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG   P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 328 TSGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYP 375


>gi|328553134|gb|AEB23626.1| L-lysine 2,3-aminomutase [Bacillus amyloliquefaciens TA208]
 gi|328912092|gb|AEB63688.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens LL3]
          Length = 473

 Score =  239 bits (610), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 122/348 (35%), Positives = 204/348 (58%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +E+ + ++       + +TP  A+L++P NP  PI  Q 
Sbjct: 31  WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++I+R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L Q LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            +G   P +++D PGG GK+ +  + +         I +   ++  YP
Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYP 375


>gi|224170200|ref|XP_002339353.1| predicted protein [Populus trichocarpa]
 gi|222874958|gb|EEF12089.1| predicted protein [Populus trichocarpa]
          Length = 361

 Score =  239 bits (610), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 119/314 (37%), Positives = 195/314 (62%), Gaps = 3/314 (0%)

Query: 35  YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
           + +++TP   +LIN  +  NDP+ +Q  P   EL I   +  DP+ ++  SP+ G+ HRY
Sbjct: 47  FPLSITPYYLSLINTDDHENDPVFKQAFPCSRELEIEKHDMADPLSEDKDSPVPGVTHRY 106

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           PDR+LL++ +VC +YCR C R+  VG  + ++   +D    + Y+++  +I +V+ +GGD
Sbjct: 107 PDRVLLQVSNVCSMYCRHCTRKRKVGD-RDSIPGREDILKGIDYVRQHPEIRDVLLSGGD 165

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+LS   L  +L  +R I HVQ++R  +R+P+V P RI PEL++ LK+  +P+++  H 
Sbjct: 166 PLMLSDDYLDWILTEVRRIPHVQVIRIGTRMPVVLPYRITPELVERLKKH-QPLWLNTHF 224

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E +  A  A+  LA+AGI L +QSVLL G+ND   I+ +L+   VE R++PYYL+ 
Sbjct: 225 NHPREINASAKEALRLLADAGIPLGNQSVLLAGVNDCQRIMKSLVHKLVENRVRPYYLYQ 284

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
            DLA G SHFR  + +G +I+ SL+   SG   P Y++D PGG GK+ ++ + +  +   
Sbjct: 285 CDLAEGLSHFRTPVGKGIEIMESLRGHTSGFAVPTYVIDAPGGGGKIPMNPNYLISLSTN 344

Query: 334 SYCITDHHNIVHDY 347
              + ++  ++  Y
Sbjct: 345 KVVLRNYEGVITTY 358


>gi|57234982|ref|YP_180969.1| GNAT family L-lysine 2,3-aminomutase/acetyltransferase
           [Dehalococcoides ethenogenes 195]
 gi|57225430|gb|AAW40487.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
           [Dehalococcoides ethenogenes 195]
          Length = 708

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 128/336 (38%), Positives = 198/336 (58%), Gaps = 10/336 (2%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDN 81
           E+   +++   ++ +++TP   +LI+P N  NDP+  Q +P   ELN    ++EDP+ ++
Sbjct: 42  EKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVFIQSVPSAAELNFSCHDKEDPLAED 101

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
             SP  GI HRYPDR+L  + + C +YCR C R+  VG    T LS  D    L YI+  
Sbjct: 102 VDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDVDKT-LSRDDLVKGLEYIKNT 160

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
            Q+ +V+ +GGDPL+LS   L+ +L  L+ I HVQ++R  +RVP+V PQRI P L++ +K
Sbjct: 161 PQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQVIRIGTRVPVVLPQRITPHLVKIIK 220

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           +   PV++  H NHP E +  +I A+  LA+AGI L +Q+VLL  +ND P ++  L+   
Sbjct: 221 KY-HPVWVNTHFNHPREITATSIRALRLLADAGIPLGNQTVLLAKVNDCPRVMKALVHKL 279

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
           VE R++PYYL+  D A G SHFR +I +G +I+ +L    SG   P Y++D P G GK+ 
Sbjct: 280 VENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGFAVPTYVIDAPNGGGKIP 339

Query: 322 IDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
           I  + +    +    + ++  I+  Y       PPK
Sbjct: 340 IMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 375


>gi|206603974|gb|EDZ40454.1| Lysine 2,3-aminomutase [Leptospirillum sp. Group II '5-way CG']
          Length = 383

 Score =  239 bits (609), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 123/320 (38%), Positives = 194/320 (60%), Gaps = 6/320 (1%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           E+   + + +     +LI   +P  PI RQ IP  EE+    +   DP+G+++ SP+  I
Sbjct: 33  EVEKTFPVRINAYYRSLIT--DPEGPIGRQVIPDPEEVLDF-DSPVDPLGEDSDSPVPAI 89

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           VHRYPDR+L  + + CP+YCR+C R+ M+G+ +G V  S + E  + YI+   ++ +VI 
Sbjct: 90  VHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEGVVTRS-EVEEGIEYIRTHPEVRDVIL 148

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL+L    L+ +L  LR I H++I+R  SRVP   PQR+ PEL   LK+   P+++
Sbjct: 149 SGGDPLMLKDDYLEFILSGLRKIPHLEIIRIGSRVPSSLPQRVTPELCAMLKKY-HPLFM 207

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
            +H NHP E + E+  A + LA+AGI L  Q+VL+KG+ND+  IL  L +  + +R+KPY
Sbjct: 208 NLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKLLTIRVKPY 267

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN-IK 328
           YL+  DL  G +HFR  +  G +I+  L+   SG+  P +++D PGG GKV I   + + 
Sbjct: 268 YLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVPILPPDYLV 327

Query: 329 KVGNGSYCITDHHNIVHDYP 348
            + +G   + ++   V+ YP
Sbjct: 328 SMEDGDVVLRNYEGNVYTYP 347


>gi|45655809|ref|YP_003618.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45602780|gb|AAS72255.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 365

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 134/347 (38%), Positives = 193/347 (55%), Gaps = 6/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           +Q R KT T   +      + +++I   +  S  +  ++TP    L  P +PN PI  Q 
Sbjct: 21  IQNRIKTRTHLSEFLE---LSEKEILSFEACSQFFEFSVTPYYLGLAAPKDPNCPIRLQI 77

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P +EEL     E++DP+ +    P+KG+ HRYPDR+L  L HVC VYCRFC R+  V S
Sbjct: 78  VPHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRVLWYLSHVCAVYCRFCTRKRKV-S 136

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +       +D + AL Y     +I EVI +GGDPL LS  +L  +LK L+ I H+  +R 
Sbjct: 137 KSSHTPGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRI 196

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
           HSR P+  P RI+  L   LK    P+YI  H NHP E +      IS L   G  ++L+
Sbjct: 197 HSRYPVTLPMRIDSSLCAVLKRHF-PIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLN 255

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q VLLKGIND  E L  L      + IKPYYLH  D   G+  FR+ IE+G +I+  ++ 
Sbjct: 256 QGVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRG 315

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
           +ISGL  P Y++DL GG GKV + T  + +  + SY   ++ + +++
Sbjct: 316 RISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYQDELYE 362


>gi|163782523|ref|ZP_02177520.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882096|gb|EDP75603.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 378

 Score =  238 bits (608), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 121/332 (36%), Positives = 207/332 (62%), Gaps = 3/332 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q+R++ + S ++L     + +E+++ I+     Y +A+TP   +L++P +  DPI  Q I
Sbjct: 29  QIRNR-IKSLEELQRYVRLTEEEVEGIRLTQGLYPLAITPYYLSLMDPDDTEDPIRLQAI 87

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P++ E++   +   +P        + G+ HRYPDR+L+ +   C VYCR C R+ +  ++
Sbjct: 88  PRRIEVDEEAQSAGEPDALREEGDIPGLTHRYPDRVLMSVTTFCAVYCRHCMRKRIF-AE 146

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                + ++ +  L+YI+E  ++ +V+ +GG+PL LS+++++ +LK LR IKHV+I+RF 
Sbjct: 147 GERARTKEEIDRMLSYIREHEEVRDVLISGGEPLSLSNEKIEYILKGLREIKHVEIVRFG 206

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +R+P++ PQR   E +  + E   P++I  H NHP E +E A  A+ RL   GI + +Q+
Sbjct: 207 TRLPVLAPQRFFDEELLSILEKYSPIWINTHFNHPKEVTELAEEAVDRLLRHGIPVNNQT 266

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND+PEI+ +L R  + +++KP YL H D   G  HFR T+++G +I+  L+ KI
Sbjct: 267 VLLKGVNDNPEIMLSLFRKLLRIKVKPQYLFHCDPIRGAVHFRTTVDKGLEIMRFLRGKI 326

Query: 302 SGLCQPFYILDLPGGYGKVKID-THNIKKVGN 332
           SG+  P Y +DLPGG GKV +   + + + GN
Sbjct: 327 SGMGIPTYAVDLPGGKGKVPLQPNYVVGREGN 358


>gi|116748157|ref|YP_844844.1| lysine 2,3-aminomutase YodO family protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116697221|gb|ABK16409.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB]
          Length = 460

 Score =  238 bits (608), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 126/351 (35%), Positives = 201/351 (57%), Gaps = 8/351 (2%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYS---IALTPVIANLINPHNPNDPIA 57
            QLR++     QD      I +   DE+K +++      +A+TP  A+L++ ++P+ P+ 
Sbjct: 92  WQLRNRI----QDREALARIIRLSDDELKAVTSGRGPLPVAITPYYASLLDCNDPSQPVR 147

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           R  +P   E    P E EDP+G+   S L  +VHRYPDR+L  +   C  YCR+C R  M
Sbjct: 148 RCVVPVDREYFHHPCETEDPLGEEKDSQLPNLVHRYPDRVLFLVTGYCSTYCRYCTRSRM 207

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG++       ++ + A+ YI+    I +V+ +GGDPL L +  L+ +L  LR I HV+ 
Sbjct: 208 VGNRGTYRFGHREWDRAIEYIERTPTIRDVLLSGGDPLTLPNDHLKWLLSRLRRIPHVEF 267

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           LR  ++VP+V PQR+   L++ LK+   P++++IH  HP E + E   A +RLA+AGI L
Sbjct: 268 LRIGTKVPVVLPQRVTMGLVRMLKQY-HPLWMSIHFTHPDELTPETAHACTRLADAGIPL 326

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            SQ+VLL G+ND+ E +  L    +++R+KPYYL+  D   G+SHFR  + +G +I+  L
Sbjct: 327 GSQTVLLSGVNDNVETMTRLFHGLLKIRVKPYYLYQCDPIPGSSHFRTPVSKGLEIIRGL 386

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           +   SG   P Y++D PGG GKV +    +         + ++   ++ YP
Sbjct: 387 RGFTSGYAVPTYVIDAPGGGGKVPLLPEYVAGRDGDDLLLRNYAGDLYRYP 437


>gi|94985093|ref|YP_604457.1| hypothetical protein Dgeo_0988 [Deinococcus geothermalis DSM 11300]
 gi|94555374|gb|ABF45288.1| Lysine 2,3-aminomutase [Deinococcus geothermalis DSM 11300]
          Length = 483

 Score =  238 bits (608), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 116/288 (40%), Positives = 174/288 (60%), Gaps = 2/288 (0%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           + + +TP  A+L++P +P  P+ RQ IP   EL       ED + ++ HSP+ G+VHRYP
Sbjct: 73  FRLDITPYFASLMDPEDPTCPVRRQVIPTHHELEPFTAMMEDSLAEDKHSPVPGLVHRYP 132

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           DR+L+ +   C  YCR+C R  +VG    T     +    L Y++   Q+ +V+ +GGDP
Sbjct: 133 DRVLMLVTTQCASYCRYCTRSRIVGDPTET-FKPDEYRLQLEYLRNTPQVRDVLLSGGDP 191

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L L+ K L  +L  LR I+H++I+R  +RVP+  P RI  EL   L E   P+++ IH N
Sbjct: 192 LTLAPKVLAGLLSELRKIEHIEIIRIGTRVPVFLPMRITQELCDVLAEH-HPLWMNIHVN 250

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           HP E + E   A  RL  AG+ L +QSVLL+G+ND P I+  L+R  V++R++PYY++  
Sbjct: 251 HPKEITPEVAEACDRLTRAGVPLGNQSVLLRGVNDHPVIMQKLVRELVKIRVRPYYIYQC 310

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           DL  G  H R T+ +G +I+ SL+   SG   P Y++D PGG GK+ +
Sbjct: 311 DLVHGAGHLRTTVAKGLEIMESLRGHTSGYSVPTYVVDAPGGGGKIPV 358


>gi|300863800|ref|ZP_07108726.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506]
 gi|300338201|emb|CBN53872.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506]
          Length = 384

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 117/313 (37%), Positives = 190/313 (60%), Gaps = 3/313 (0%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++A+TP  A+L++P +P  P+  Q +P++EEL I   +  DP  ++  SP+ G+VHRYP
Sbjct: 71  FAVAVTPHFASLLDPEDPLCPLRLQVVPKEEELTIDRADMVDPCSEDEDSPVPGLVHRYP 130

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           DR+LL  L  C  YCR+C R  +V SQ      ++  +A +AY++E +++ +V+ +GGDP
Sbjct: 131 DRVLLLALDTCAAYCRYCTRSRLV-SQGEMYPVTRRIDAIIAYLEEHTEVRDVLISGGDP 189

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L++S + L  +L+ LR I H++ +R  SRVP   PQRI PEL+  L++    V++++H  
Sbjct: 190 LLMSDEPLDNLLRRLRAIPHIEFVRIGSRVPSFLPQRITPELVAVLRK--HRVWLSLHFC 247

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           H  E + E   A   LA+ GI L SQ+VLLKG+ND  + L +L    ++LR++PYYL+  
Sbjct: 248 HLRELTPEVAQACDLLADGGIPLGSQTVLLKGVNDSEQALKDLFHGLLKLRVRPYYLYQC 307

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
           D   GT+H R +++ G  +++ L+   +G   P Y++D PGG GKV I    +    NG 
Sbjct: 308 DPVIGTAHLRTSVQTGIDLISKLRGHTTGYAVPTYVIDAPGGGGKVPIQADTLIAYENGK 367

Query: 335 YCITDHHNIVHDY 347
             + +     + Y
Sbjct: 368 TTVRNWEGKTYTY 380


>gi|325111083|ref|YP_004272151.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
 gi|324971351|gb|ADY62129.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
          Length = 457

 Score =  238 bits (607), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 114/323 (35%), Positives = 190/323 (58%), Gaps = 2/323 (0%)

Query: 26  DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
           + +++      + +TP   +L++P +P  P+ +  +P   E    P E +DP+G++ HSP
Sbjct: 132 EALQQGGTMLPVGVTPYYMSLLDPTDPYQPLRKTVLPSTAEFVRTPGEADDPLGEDGHSP 191

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           + G+VHRYPDR+LL  L  C  YCR+C R  +VG  +    S    E    Y+Q   Q+ 
Sbjct: 192 VPGLVHRYPDRVLLLALDFCSTYCRYCTRSRVVGHGE-IAPSDARLEKIFQYLQNSPQVR 250

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +V+ +GGDPL L  ++L  +L+ LR I H++ +R  +++P V PQRI PEL+  ++    
Sbjct: 251 DVLISGGDPLALKDEKLAYILRRLREIPHIEFVRIGTKMPAVLPQRITPELVNAIRPY-H 309

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           PV++++H  HP E + E+  A  RLA+AGI L SQ+VLLKG+ND+ E +  L    +  R
Sbjct: 310 PVWMSLHFLHPDECTPESKQACERLADAGIPLGSQTVLLKGVNDNVETMKQLTHKLLMNR 369

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           ++PYYL+  D  +G++HFR ++ +G +I++ L+   +G   P Y++D PGG GK+ +   
Sbjct: 370 VRPYYLYQCDPISGSAHFRTSVAKGLEIISGLRGHTTGYAVPTYVIDAPGGGGKIPLQPD 429

Query: 326 NIKKVGNGSYCITDHHNIVHDYP 348
            +    +G   + +    +  YP
Sbjct: 430 AVVGREDGHLVLRNFEGKLFRYP 452


>gi|325970648|ref|YP_004246839.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
 gi|324025886|gb|ADY12645.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
          Length = 363

 Score =  238 bits (607), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 124/321 (38%), Positives = 189/321 (58%), Gaps = 3/321 (0%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           +++N   + +     NLI+P++P+DPI RQ +P+ +E  IL EE+ DP+ + N+S  + +
Sbjct: 32  DLTNTLPLKIPMYFLNLIDPNDPDDPIRRQVVPRWQEQRILDEEQLDPLCEVNYSVTERL 91

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           +HRY  R+      VCP+YCR CFRR   G+ +G   S +  E A  Y+     + E++F
Sbjct: 92  IHRYQSRVAFLTTDVCPLYCRHCFRRRFTGTFQGPA-SKEQIEKAAEYVAVHPAVKEILF 150

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVY 208
           TGGD   LS K L+ +++T R  +   ++R  SR+P   P RI+ +LI  LK+    P Y
Sbjct: 151 TGGDVFTLSTKALEAMIQTFRDKRPDLVIRLCSRMPASYPMRIDADLIAMLKQFNTAPFY 210

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           +    NH  E +E+AI A+    +AGI  ++Q+VLLKG+NDD  +L  L  T V  RIKP
Sbjct: 211 LMTQFNHRRELTEQAIQAVRMFVDAGIPAMNQTVLLKGVNDDVCVLEELCNTLVFNRIKP 270

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHNI 327
           YYL   DL +GT+HFR+ ++EG  I A L++++SGL  P Y +DLP G GKV +   +  
Sbjct: 271 YYLFQGDLVSGTAHFRVPLKEGLAIEAELRKRLSGLAMPLYAIDLPQGGGKVPLMQGYLS 330

Query: 328 KKVGNGSYCITDHHNIVHDYP 348
           ++ G G +        +  YP
Sbjct: 331 EQSGCGLWSFRTVEGEIRTYP 351


>gi|311068654|ref|YP_003973577.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942]
 gi|310869171|gb|ADP32646.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942]
          Length = 472

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 121/348 (34%), Positives = 205/348 (58%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  +L     + +E+ + ++  +    + +TP  A+L+NP NP  PI  Q 
Sbjct: 31  WQLTH-TVRTLDELKKVIHLTEEEEEGVRISTKTIPLNITPYYASLMNPDNPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++I+R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L + LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG   P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYP 375


>gi|24217359|ref|NP_714842.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24202437|gb|AAN51857.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 365

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/347 (38%), Positives = 193/347 (55%), Gaps = 6/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           +Q R KT T   +      + +++I   +  S  +  ++TP    L +P +PN PI  Q 
Sbjct: 21  IQNRIKTRTHLSEFLE---LSEKEILSFEACSQFFEFSVTPYYLGLADPKDPNCPIRLQI 77

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P +EEL     E++DP+ +    P+KG+ HRYPDR L  L HVC VYCRFC R+  V S
Sbjct: 78  VPHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKV-S 136

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +       +D + AL Y     +I EVI +GGDPL LS  +L  +LK L+ I H+  +R 
Sbjct: 137 KSSHTPGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRI 196

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
           HSR P+  P RI+  L   LK    P+YI  H NHP E +      IS L   G  ++L+
Sbjct: 197 HSRYPVTLPMRIDSSLCAVLKRHF-PIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLN 255

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q VLLKGIND  E L  L      + IKPYYLH  D   G+  FR+ IE+G +I+  ++ 
Sbjct: 256 QGVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRG 315

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
           +ISGL  P Y++DL GG GKV + T  + +  + SY   ++ + +++
Sbjct: 316 RISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYRDELYE 362


>gi|312881010|ref|ZP_07740810.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260]
 gi|310784301|gb|EFQ24699.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260]
          Length = 422

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/340 (36%), Positives = 194/340 (57%), Gaps = 2/340 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +T+ + L     +   +  EI+E      +A+TP  A+LI+P +P DP+ RQ +P   E 
Sbjct: 29  ITTVEVLRRVIPLSDPEAREIQESLGALRMAITPYYASLIDPKDPEDPVRRQAVPSILET 88

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           ++   +  DP+ ++  SP+ G+ HRYPDR +L L   C +YCR C RR   G +     S
Sbjct: 89  HVAETDLRDPLHEDVDSPVPGLTHRYPDRGILLLTDQCSMYCRHCTRRRKAG-ETDHAYS 147

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
                AAL YI+      +V+FTGGDP ++    L  VL  +  I HV+I+RF +R P+V
Sbjct: 148 RDRIAAALDYIRRTPTFRDVLFTGGDPFLVDDGTLDWVLTEVGSIPHVEIVRFGTRTPVV 207

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI  +L   LK    PV++  H NHP E + ++ AA ++LANAGI L +QSVLLKG+
Sbjct: 208 MPQRITDDLCALLKRH-HPVWVNTHFNHPREITPQSRAACAKLANAGIPLGNQSVLLKGV 266

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND P +   L +  + LR++PYY++  DL+ G  HFR  + +G +I+  L+   SG+  P
Sbjct: 267 NDCPYVFRELNQQLLTLRVRPYYIYQCDLSQGIEHFRTPVAKGLEIMEYLRGHTSGMAVP 326

Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            +I+D PGG GK+ +  + +  + +    + ++  +   Y
Sbjct: 327 TFIVDAPGGGGKIPLLPNYLVSMSDKRVVLRNYEGVFSTY 366


>gi|330837285|ref|YP_004411926.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides
           DSM 17374]
 gi|329749188|gb|AEC02544.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides
           DSM 17374]
          Length = 358

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 119/319 (37%), Positives = 188/319 (58%), Gaps = 5/319 (1%)

Query: 19  LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
           L +KEQ  E    S  + +  +   A+LI P + +DPI RQ +P   E+   P E EDP+
Sbjct: 26  LTEKEQAWEKDGTSPPFGV--STYYASLITPSDSDDPIRRQILPTSCEMMYSPGESEDPL 83

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
            +  HS    ++HRY +R+   +   C VYCR CFRR   G+Q+G   +++D  AA  Y+
Sbjct: 84  AEEEHSVTSRLIHRYAERVAFLVTDACAVYCRHCFRRRFTGTQRGPA-TTEDIIAAARYV 142

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
               ++ E++FTGGD   LS++++  ++   R ++   I+R  SRVP+V P RI   L+ 
Sbjct: 143 GAHQEVKEILFTGGDMFTLSNEKIDALIGEFRAVRPDLIIRLCSRVPVVLPSRITDGLMA 202

Query: 199 CLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
            +K+ +  P ++ +  NHP E + ++  A +R  +AGI + +QSVLL+G+NDD  IL  L
Sbjct: 203 VMKKHSSAPFFLMVQFNHPRELTAQSREATARFIDAGIPVFNQSVLLRGVNDDAGILEEL 262

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
               +  RIKPYYL   DL  GT+H R+ +E+G  +V  L+ ++SGL  P Y +DLP G 
Sbjct: 263 CNGLLAARIKPYYLFQGDLVEGTAHLRVPLEKGLALVKELRRRLSGLAMPVYAVDLPEGG 322

Query: 318 GKVKIDTHNIK-KVGNGSY 335
           GKV +D+  +K +  +G++
Sbjct: 323 GKVPVDSMYLKGRDSDGAW 341


>gi|270307988|ref|YP_003330046.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS]
 gi|270153880|gb|ACZ61718.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS]
          Length = 439

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 126/315 (40%), Positives = 184/315 (58%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TS  ++     +  E+  ++  +S  + ++ TP   +LI+  N NDP+  Q +P   EL
Sbjct: 65  VTSVAEIARFFHLSAEEYRDMDSVSAVFPLSATPYYLSLIDFDNVNDPVKLQLMPDTAEL 124

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
                   DP+G+ + S + G+VHRYPDR+++ L  +CPV CR C R+       G V +
Sbjct: 125 CFDAYCCSDPLGEEHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             + +A LAYI++   I +VI +GGDPL LS  RL+ VL  LR I HV+I+R  +R P+V
Sbjct: 184 QAEIDAMLAYIRQNPVIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRIGTRYPVV 243

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI+ EL   L + G  +++  H NHP E +EE+  A  RL  AG+ + +QSVLLKGI
Sbjct: 244 LPQRIDDELCNMLSKYGT-IWLNTHYNHPNEITEESRRACDRLVRAGVPVNNQSVLLKGI 302

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   I  +L    +  +++PYYL   D   GT HF  TIE G  I+  L+   SGL  P
Sbjct: 303 NDSVAIQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTTIETGVGIIEGLRGYTSGLAVP 362

Query: 308 FYILDLPGGYGKVKI 322
            Y++DLPGG GK+ +
Sbjct: 363 NYVIDLPGGGGKITV 377


>gi|39996853|ref|NP_952804.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA]
 gi|39983741|gb|AAR35131.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA]
 gi|298505867|gb|ADI84590.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens KN400]
          Length = 353

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 121/310 (39%), Positives = 183/310 (59%), Gaps = 14/310 (4%)

Query: 27  EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPL 86
           ++  +   Y + +TP    L+    P DPI RQ IP   EL    +++ DP+ +   SP+
Sbjct: 28  QLAPVIRRYPMRITPGYLRLVE--APGDPIWRQCIPDPAEL--CDDQQSDPLHEERLSPV 83

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKS 142
            G++HRYPDR++  +   C VYCRFC R+  VG      ++S+  E      L YI E  
Sbjct: 84  PGLIHRYPDRVVWVVSGECAVYCRFCMRKRQVGC-----MTSRHCEDPFGEPLRYIAETP 138

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            I +VI +GGDPL+L  +RL+++L  L  I HV+++R  +R P+  P+RI   L + LK 
Sbjct: 139 AIRDVILSGGDPLLLDDERLEEILARLAAIPHVEMVRIGTRTPVTLPERITARLCRMLKR 198

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
              P+Y+  H NHP E + EA  A +RLA+AGI L +QSVLL  +NDDP ++  LM+  +
Sbjct: 199 Y-HPLYVNTHFNHPREITAEAAKACARLADAGIPLGNQSVLLADVNDDPAVMTRLMQLLL 257

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            +R++PYY+H  DL  GT HFR  +  G +I+ +L+   SG+  P Y++D PGG GK+ +
Sbjct: 258 SIRVRPYYIHQMDLVRGTGHFRTPVATGLEILTALRGNTSGMATPHYVIDAPGGKGKIPL 317

Query: 323 DTHNIKKVGN 332
               I + G+
Sbjct: 318 LPDCISRRGD 327


>gi|134045706|ref|YP_001097192.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
 gi|132663331|gb|ABO34977.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
          Length = 433

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/343 (36%), Positives = 209/343 (60%), Gaps = 4/343 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIARQFIPQK 64
           K + + +     NL K E+  EI++    + +++TP  A+LI+  N + DPI +Q +   
Sbjct: 37  KDVDTLEKFLGINLDKHEK-KEIQKAIEVFPMSITPYYASLIDTKNLDKDPIYKQSVASS 95

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           +EL +   E EDP+ +++ SP+ GI HRYPDR+L  +   C +YCR C R+  V S+K +
Sbjct: 96  KELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPNCAMYCRHCTRKRKV-SEKSS 154

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
             S ++ + A+ YI+   +I +V+ +GGDPL+LS + L  +L  +  IKHV+++R  SRV
Sbjct: 155 NPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVELIRIGSRV 214

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V PQRI   L+  LK+   P++I  H NHP E ++ +  A+ +L+++GI L +Q+VLL
Sbjct: 215 PVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVEITKASKVALDKLSDSGIPLGNQTVLL 273

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
            G+ND P ++  L +  V  R++PYYL+  DL+ G SHFR ++ +G +I+ SL    +G 
Sbjct: 274 AGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESLIGHTTGF 333

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             P Y++D PGG GK+ +  + +   G+    + ++  I+  Y
Sbjct: 334 AVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITTY 376


>gi|332702266|ref|ZP_08422354.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay]
 gi|332552415|gb|EGJ49459.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay]
          Length = 447

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 116/314 (36%), Positives = 191/314 (60%), Gaps = 3/314 (0%)

Query: 35  YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
           + +++TP   +LI+  +  NDP+ RQ  P   EL+I P +  DP+ ++  SP  GI HRY
Sbjct: 64  FPLSITPYYLSLIDTADYANDPVFRQAFPSVRELDIGPHDMADPLHEDEDSPAPGITHRY 123

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           PDR+L  + ++C +YCR C R+  VG + G +      E  LAYI+   ++ +V+ +GGD
Sbjct: 124 PDRVLFHVSNLCAMYCRHCTRKRKVGDE-GHIPRRAQMEQGLAYIRSAPRVRDVLLSGGD 182

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+L  + L  +L  LR I+HV+++R  SR+P+V P R+  +L+  +++   PV++  H 
Sbjct: 183 PLMLPDETLDWLLWNLRKIEHVEVVRIGSRMPVVLPYRVTDDLMSIIRKH-HPVWLNTHF 241

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E +  A  A+++LA+AGI L +QSVLL G+ND P I+ +L+   V  R++PYYL+ 
Sbjct: 242 NHPREVTRSAREALAKLADAGIPLGNQSVLLAGVNDCPRIMRSLLHKLVRNRVRPYYLYQ 301

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
            DL+ G +HFR  + +G +I+ SL    SG  +P Y++D PGG GK+ +  + +      
Sbjct: 302 CDLSEGLTHFRTPVGKGIEIIESLVGHTSGFARPTYVIDAPGGGGKIPVTPNYVISWATN 361

Query: 334 SYCITDHHNIVHDY 347
              + ++  ++  Y
Sbjct: 362 KVVLRNYEGVITTY 375


>gi|45358424|ref|NP_987981.1| lysine 2,3-aminomutase [Methanococcus maripaludis S2]
 gi|44921182|emb|CAF30417.1| Lysine 2,3-aminomutase [Methanococcus maripaludis S2]
          Length = 433

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 124/343 (36%), Positives = 210/343 (61%), Gaps = 4/343 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
           K + + ++       +KE+  EI++  + + +++TP  A+LI+  N   DPI +Q +   
Sbjct: 37  KDVDTLENFLGITFDEKEKT-EIQKAIDVFPMSITPYYASLIDIKNLGKDPIYKQSVASS 95

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           +EL +   E EDP+ ++  SP+ GI HRYPDR+L  +   C +YCR C R+  V S+K +
Sbjct: 96  KELILENFEMEDPLSEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRKV-SEKSS 154

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
             S ++ + A+ YI+  ++I +V+ +GGDPL+LS + L  +L  +  IKHV+++R  SRV
Sbjct: 155 NPSKEEIQKAIDYIKNNNKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVELIRIGSRV 214

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V PQRI   L+  LK+   P++I  H NHP E ++E+  A+ +L+++GI L +Q+VLL
Sbjct: 215 PVVLPQRITDNLVNVLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPLGNQTVLL 273

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
            G+ND P ++  L +  V  R++PYYL+  DL+ G SHFR ++ +G +I+ SL    +G 
Sbjct: 274 AGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESLIGHTTGF 333

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             P Y++D PGG GK+ +  + +   G+    + ++  I+  Y
Sbjct: 334 AVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITSY 376


>gi|153004183|ref|YP_001378508.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152027756|gb|ABS25524.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 385

 Score =  237 bits (604), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 121/343 (35%), Positives = 192/343 (55%), Gaps = 4/343 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L +A++L     + +E+   + +      +A+TP  A+L++P +P+ PI  Q IP   E
Sbjct: 25  ALRTAEELGRVVWLGEEERRGLAQALGRTRVAVTPYYASLMDPRHPSCPIRLQAIPSARE 84

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P +  DPIG+  H P + IVH+Y DR+L   +  C VYCR C RR +     G   
Sbjct: 85  AEEAPGDLRDPIGEEAHRPARAIVHKYRDRVLFLAVDRCSVYCRHCTRRRITFGADGG-F 143

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                E  +AY++   ++ +VI +GGDPL+LS +RL  +L  LR I HVQ+LR  +R P+
Sbjct: 144 DRDAIEEGIAYVRAHREVRDVIVSGGDPLVLSDERLDALLGGLRAIPHVQLLRVATRAPV 203

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
             P R+ P L   L+    P+++  H NHP E + +A AA   L + G+ + +QSVLL+G
Sbjct: 204 TCPMRVTPALAALLRRHA-PLFVVTHFNHPAECTPDARAACEALVDHGVPVENQSVLLRG 262

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +N    +L +L    +  R++PYYLH  DLA GT+H R  +E G  I+ +++ + SGL  
Sbjct: 263 VNSSARLLTDLNERLLTFRVRPYYLHQGDLAEGTAHLRTPLEAGVAILEAMRGRTSGLAI 322

Query: 307 PFYILDLPGGYGKVKID-THNIKKVGNGSYCITDHHNIVHDYP 348
           P   +DLP G GK+ +  ++ + + G G++ +  H    + YP
Sbjct: 323 PHLAVDLPDGGGKITLQPSYQLGREG-GAHALRSHRGGRYLYP 364


>gi|152975473|ref|YP_001374990.1| lysine 2,3-aminomutase YodO family protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152024225|gb|ABS21995.1| lysine 2,3-aminomutase YodO family protein [Bacillus cytotoxicus
           NVH 391-98]
          Length = 472

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 123/342 (35%), Positives = 198/342 (57%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + +K  +    + +TP  A+L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDEAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIMKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 375


>gi|298372919|ref|ZP_06982909.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275823|gb|EFI17374.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 411

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 119/303 (39%), Positives = 185/303 (61%), Gaps = 2/303 (0%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           +  E+ + +KE      +A+TP   +LI+  NPN P+ +Q IP   E +    +  DP+ 
Sbjct: 40  LTTEEENGVKESLKTLRMAITPYYLSLIDQSNPNCPVRKQAIPTHAETHHSAADLLDPLH 99

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           ++  SP  G+ HRYPDR+LL +  +C +YCR C RR   G Q  +  S  D   A+ YI 
Sbjct: 100 EDGDSPAPGLTHRYPDRVLLLVTDMCSMYCRHCTRRRFAG-QTDSSSSKDDISKAIDYIA 158

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
              Q+ +V+ +GGD L++S  RL+ ++  LR I HV+I+R  +R P+V PQRI  +L+  
Sbjct: 159 RTPQVRDVLLSGGDALMISDTRLESIISRLREIPHVEIIRIGTRTPVVCPQRITDDLVNM 218

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           LK+   P+++  H NHP E +EE+IAA  R+ANAGI L +QSVLL+G+ND    +  L+ 
Sbjct: 219 LKKY-HPIWLNTHFNHPQEVTEESIAACERMANAGIPLGNQSVLLRGVNDCVPTMKKLVH 277

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             V++R++PYY++  DL+ G  HFR  + +G +I+ +L+   SG   P +++D PGG GK
Sbjct: 278 QLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIENLRGHTSGYAVPTFVVDAPGGGGK 337

Query: 320 VKI 322
             +
Sbjct: 338 TPV 340


>gi|296329460|ref|ZP_06871947.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674784|ref|YP_003866456.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153342|gb|EFG94204.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413028|gb|ADM38147.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 471

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 206/348 (59%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +++ + ++  +    + +TP  A+L++P NP  P+  Q 
Sbjct: 31  WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++++R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  +L + LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDQLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG   P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKIILRNFEGVITSYP 375


>gi|228991284|ref|ZP_04151242.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442]
 gi|228997381|ref|ZP_04157001.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17]
 gi|229005016|ref|ZP_04162741.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
 gi|228756220|gb|EEM05540.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
 gi|228762340|gb|EEM11266.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17]
 gi|228768508|gb|EEM17113.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442]
          Length = 482

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 123/342 (35%), Positives = 198/342 (57%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + +K  +    + +TP  A+L+NP +P  PI  Q +P  EE
Sbjct: 46  TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISEE 105

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 106 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 164

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 165 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 224

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 225 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 283

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 284 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 343

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 344 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 385


>gi|150402033|ref|YP_001329327.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C7]
 gi|150033063|gb|ABR65176.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C7]
          Length = 433

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 123/329 (37%), Positives = 203/329 (61%), Gaps = 3/329 (0%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIARQFIPQKEELNILPEEREDPI 78
           ++ E+  EI++    + +++TP  A+LI+  N + DPI +Q +   +EL +   E EDP+
Sbjct: 50  LENEEKKEIQKAIEVFPMSITPYYASLIDIKNLDKDPIYKQSVASSKELILENFEMEDPL 109

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
            ++  SP+ GI HRYPDR+L  +   C +YCR C R+  V S+K +  S ++ + A+ YI
Sbjct: 110 SEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRKV-SEKSSNPSKEEIQKAIDYI 168

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           +   +I +V+ +GGDPL+LS + L  +L  +  IKHV+++R  SRVP+V PQRI   L+ 
Sbjct: 169 RNNDKIRDVLLSGGDPLLLSDEYLDWILSEISSIKHVELIRIGSRVPVVLPQRITDNLVN 228

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            LK+   P++I  H NHP E ++E+  A+ +L+++GI L +Q+VLL G+ND P ++  L 
Sbjct: 229 TLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPLGNQTVLLAGVNDCPYVMRKLN 287

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
           +  V  R++PYYL+  DL+ G SHFR  + +G +I+ SL    +G   P Y++D PGG G
Sbjct: 288 QKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESLIGHTTGFAVPRYVVDAPGGGG 347

Query: 319 KVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           K+ +  + I   G+    + ++  I+  Y
Sbjct: 348 KIPVMPNYIVSWGSDRVILRNYEGIITTY 376


>gi|254463955|ref|ZP_05077366.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales
           bacterium Y4I]
 gi|206684863|gb|EDZ45345.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales
           bacterium Y4I]
          Length = 360

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 116/313 (37%), Positives = 185/313 (59%), Gaps = 2/313 (0%)

Query: 37  IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           + +TP  A+L+   +P++P+ R  IP  +E   LP E  DP+G+++ +P+ G+VHRYPDR
Sbjct: 34  VGITPYYASLMGLDDPDEPLRRTHIPVGQEYLQLPGEAGDPLGEDHDTPVPGLVHRYPDR 93

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +L      C  YCR+C R  MVG   G    S    + AL YI    ++ +V+ +GGDPL
Sbjct: 94  VLFLATGTCSTYCRYCTRSRMVGQAGGEYQFSVSQWDRALDYIAAHPEVRDVLLSGGDPL 153

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
            ++  +L  +L  LR I HV+ +R  +++PIV P R+  +L++ LK    P++++IH  H
Sbjct: 154 TIADDKLDYLLGRLRAIPHVEFIRLGAKMPIVLPMRVTRDLVRMLKRH-HPLWMSIHVTH 212

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
           P E + EA  A  RLA+AGI L SQ+VLLKGIND  +IL  + +  +  R++PYYL+  D
Sbjct: 213 PAELTPEATEACKRLADAGIPLGSQTVLLKGINDSVDILKPMYQALLMRRVRPYYLYQCD 272

Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
              G++HFR  + +G +I+  L+   +G   P +++D PGG GK+ +    +        
Sbjct: 273 PITGSAHFRTPVAKGLEIIEGLRGHTTGYAVPQFVIDAPGGGGKIPLLPDYVAGRDGSDL 332

Query: 336 CITDHHNIVHDYP 348
            + +  NI++ YP
Sbjct: 333 ILRNFENILYRYP 345


>gi|78187430|ref|YP_375473.1| hypothetical protein Plut_1576 [Chlorobium luteolum DSM 273]
 gi|78167332|gb|ABB24430.1| L-lysine 2,3-aminomutase [Chlorobium luteolum DSM 273]
          Length = 438

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 123/350 (35%), Positives = 200/350 (57%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+RH  +TL++ + L    L   EQ     +    + +++TP   +LIN  +  NDP+ 
Sbjct: 28  WQMRHSVRTLSAFESLLGITL-SDEQRKAFGQTVAKFPMSITPYYLSLINTRDMANDPVF 86

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q +P   EL I+  +  DP+ ++  SP   + HRYPDR+LL + + CP+YCR C R+  
Sbjct: 87  LQSVPSPRELEIMTGDMADPLHEDADSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG  + T+         + YI+   Q+ +V+ +GGDP +LS   L  +L  L+ I+HV++
Sbjct: 147 VG-DRDTIPGRSAISEGIDYIRRTPQVRDVLLSGGDPFLLSDDYLDWILGELQAIEHVEV 205

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V PQRI P L+  LK+  +PV++  H NHP E ++ +  A++ LA+ G+ L
Sbjct: 206 IRIGTRTPVVLPQRITPALVAVLKKH-QPVWVNTHFNHPREITQSSRNALALLADGGLPL 264

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL GIND P I+  L+   V  R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D PGG GK+ +  + +         + ++  ++  Y
Sbjct: 325 IGHTSGFSVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTY 374


>gi|57234545|ref|YP_181370.1| radical SAM domain-containing protein [Dehalococcoides ethenogenes
           195]
 gi|57224993|gb|AAW40050.1| radical SAM domain protein [Dehalococcoides ethenogenes 195]
          Length = 439

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 125/315 (39%), Positives = 185/315 (58%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TS  ++     +  E+  +++ +S  + ++ TP   +L++  N NDP+  Q +P   EL
Sbjct: 65  VTSVTEIARFFHLSAEEYRDMEAVSAVFPLSATPYYLSLVDFDNVNDPVKCQLMPDTAEL 124

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           N       DP+ + + S + G+VHRYPDR+++ L  +CPV CR C R+       G V +
Sbjct: 125 NFDTRCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             + +A LAYI++   I +VI +GGDPL LS  RL+ VL  LR I HV+I+R  +R P+V
Sbjct: 184 QAEIDAMLAYIRQHQVIRDVIISGGDPLTLSTPRLESVLSALRSIPHVEIIRIGTRYPVV 243

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI+ EL   L + G P+++  H NHP E +EE+  A  RL  AG+ + +QSVLLKGI
Sbjct: 244 LPQRIDDELCNMLSKYG-PIWLNTHYNHPNEITEESRQACDRLVRAGVPVNNQSVLLKGI 302

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   +  +L    +  +++PYYL   D   GT HF   IE G  I+  L+   SGL  P
Sbjct: 303 NDSVSVQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYTSGLAVP 362

Query: 308 FYILDLPGGYGKVKI 322
            Y++DLPGG GK+ I
Sbjct: 363 NYVIDLPGGGGKITI 377


>gi|297568546|ref|YP_003689890.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924461|gb|ADH85271.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 443

 Score =  236 bits (601), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 124/325 (38%), Positives = 192/325 (59%), Gaps = 6/325 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
             LRH  K++ + + L N      E+  E++E    + +A+TP   +LI+  N   DP+ 
Sbjct: 33  WHLRHTIKSIDTVERLLNTTF-SPEKRRELEETIARFPMAITPHYFSLIDRENYEEDPVF 91

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ +P   EL I   E  DP+ ++  SP+ GI HRYPDR+L  + ++C +YCR C R+  
Sbjct: 92  RQSVPSLSELKIGASEHSDPLAEDQDSPVTGITHRYPDRVLFHVSNLCAMYCRHCTRKRK 151

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    +V   K   A L YI++   I +V+ +GGDP +L    +  +L  LR I+HV++
Sbjct: 152 VGDVD-SVPGKKTLAAGLDYIRQTPAIRDVLLSGGDPFLLGDDLIDWLLTELRAIEHVEV 210

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V PQRI P L++ LK+   P+++  H NHP E +  +  A++ LA+AGI L
Sbjct: 211 IRIGTRTPVVLPQRITPRLVEILKKH-HPLWVNTHFNHPREITSRSRRALAMLADAGIPL 269

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P ++  L+   V  R++PYYL+  DL+ G + FR  + +G +I+ SL
Sbjct: 270 GNQSVLLAGVNDCPRVIKRLVHKLVANRVRPYYLYQCDLSEGLASFRTPVGKGIEIIESL 329

Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
               SG   P Y++D PGG GK+ +
Sbjct: 330 IGHTSGFAVPTYVIDAPGGGGKIPV 354


>gi|291484572|dbj|BAI85647.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. natto BEST195]
          Length = 471

 Score =  236 bits (601), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 205/348 (58%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +++ + ++  +    + +TP  A+L++P NP  P+  Q 
Sbjct: 31  WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++++R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L + LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG   P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVTLRNFEGVITSYP 375


>gi|321311619|ref|YP_004203906.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5]
 gi|320017893|gb|ADV92879.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5]
          Length = 471

 Score =  235 bits (600), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 205/348 (58%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +++ + ++  +    + +TP  A+L++P NP  P+  Q 
Sbjct: 31  WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++++R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L + LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG   P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYP 375


>gi|30020383|ref|NP_832014.1| lysine 2,3-aminomutase [Bacillus cereus ATCC 14579]
 gi|206971483|ref|ZP_03232433.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134]
 gi|218232653|ref|YP_002366998.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264]
 gi|228958567|ref|ZP_04120287.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229044042|ref|ZP_04191731.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676]
 gi|229069827|ref|ZP_04203109.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185]
 gi|229079468|ref|ZP_04212008.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2]
 gi|229109738|ref|ZP_04239324.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15]
 gi|229127695|ref|ZP_04256684.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4]
 gi|229144892|ref|ZP_04273289.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24]
 gi|229150521|ref|ZP_04278737.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550]
 gi|229178666|ref|ZP_04306030.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W]
 gi|229190380|ref|ZP_04317381.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876]
 gi|296502862|ref|YP_003664562.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171]
 gi|29895934|gb|AAP09215.1| Lysine 2,3-aminomutase [Bacillus cereus ATCC 14579]
 gi|206733468|gb|EDZ50640.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134]
 gi|218160610|gb|ACK60602.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264]
 gi|228593164|gb|EEK50982.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876]
 gi|228604824|gb|EEK62281.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W]
 gi|228633014|gb|EEK89627.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550]
 gi|228638614|gb|EEK95047.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24]
 gi|228655772|gb|EEL11621.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4]
 gi|228673779|gb|EEL29037.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15]
 gi|228703838|gb|EEL56284.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2]
 gi|228713230|gb|EEL65123.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185]
 gi|228725323|gb|EEL76591.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676]
 gi|228801194|gb|EEM48091.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|296323914|gb|ADH06842.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171]
          Length = 473

 Score =  235 bits (600), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 124/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|15605944|ref|NP_213321.1| hypothetical protein aq_454 [Aquifex aeolicus VF5]
 gi|4033489|sp|O66761|Y454_AQUAE RecName: Full=Uncharacterized KamA family protein aq_454
 gi|2983117|gb|AAC06722.1| hypothetical protein aq_454 [Aquifex aeolicus VF5]
          Length = 370

 Score =  235 bits (600), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 124/316 (39%), Positives = 189/316 (59%), Gaps = 3/316 (0%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           E+ + IK     Y  A+TP   +LINP +P DPI  Q IP+  E++   +   +P     
Sbjct: 39  EEEEGIKRTQGLYPFAITPYYLSLINPEDPKDPIRLQAIPRVVEVDEKVQSAGEPDALKE 98

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
              + G+ HRYPDR+LL +   C VYCR C R+ +  SQ     + ++ +  + YI+   
Sbjct: 99  EGDIPGLTHRYPDRVLLNVTTFCAVYCRHCMRKRIF-SQGERARTKEEIDTMIDYIKRHE 157

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLK 201
           +I +V+ +GG+PL LS ++L+ +L  LR IKHV+I+RF +R+P++ PQR  N +L+  L 
Sbjct: 158 EIRDVLISGGEPLSLSLEKLEYLLSRLREIKHVEIIRFGTRLPVLAPQRFFNDKLLDIL- 216

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           E   P++I  H NHP E +E A  A+ RL   GI + +Q+VLLKG+NDDPE++  L R  
Sbjct: 217 EKYSPIWINTHFNHPNEITEYAEEAVDRLLRRGIPVNNQTVLLKGVNDDPEVMLKLFRKL 276

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
           + +++KP YL H D   G  HFR TI++G +I+  L+ ++SG   P Y +DLPGG GKV 
Sbjct: 277 LRIKVKPQYLFHCDPIKGAVHFRTTIDKGLEIMRYLRGRLSGFGIPTYAVDLPGGKGKVP 336

Query: 322 IDTHNIKKVGNGSYCI 337
           +  + +KK     +  
Sbjct: 337 LLPNYVKKRKGNKFWF 352


>gi|16079027|ref|NP_389850.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309872|ref|ZP_03591719.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221314195|ref|ZP_03596000.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221319118|ref|ZP_03600412.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323391|ref|ZP_03604685.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|4033499|sp|O34676|KAMA_BACSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName:
           Full=KAM
 gi|2415401|gb|AAB72069.1| YodO [Bacillus subtilis]
 gi|2634361|emb|CAB13860.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 471

 Score =  235 bits (599), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 205/348 (58%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +++ + ++  +    + +TP  A+L++P NP  P+  Q 
Sbjct: 31  WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++++R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L + LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG   P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYP 375


>gi|28210601|ref|NP_781545.1| L-lysine 2,3-aminomutase [Clostridium tetani E88]
 gi|28203039|gb|AAO35482.1| L-lysine 2,3-aminomutase [Clostridium tetani E88]
          Length = 424

 Score =  235 bits (599), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 117/322 (36%), Positives = 195/322 (60%), Gaps = 3/322 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++  T  Q     NL+ +E+ + I +      + ++P  A LI+P +PNDP+ +Q 
Sbjct: 23  WQVKNRITTIDQLKKIINLLPEEE-EAIDKCLKTLRMGISPYYATLIHPDDPNDPVRKQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL+    +  DP+ ++  SP+ G+ H YPDR+LL +  +C +YCR C RR   G 
Sbjct: 82  VPTLHELSFSEADMFDPLHEDASSPVPGLTHAYPDRVLLLVTDMCSMYCRHCTRRRFAGH 141

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              ++  ++  + AL YI+    + +V+ +GGD  ++S + +  +LK LR I HV+I+RF
Sbjct: 142 TDNSMPQNR-IDMALDYIRNTPTVRDVLLSGGDGFMISDENIDYILKNLREIPHVEIIRF 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V+P RI   L+  LK+   P+++  H NHP E +E +I A  +LANAGI + +Q
Sbjct: 201 GTRTPVVNPMRITDNLVNILKKY-HPIWVNTHFNHPNEITEYSIKACEKLANAGIPIGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GIND   I  +L+   V++R++PYYL+  DL+ G  HFR  + +G +I+  L+  
Sbjct: 260 TVLLRGINDCVYIQKDLVHKLVKMRVRPYYLYQCDLSQGIEHFRTKVSKGIEIIEGLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
            SG   P +++D PGG GK+ +
Sbjct: 320 TSGFAVPTFVVDAPGGGGKIPV 341


>gi|229074953|ref|ZP_04207960.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18]
 gi|229096796|ref|ZP_04227766.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29]
 gi|229102897|ref|ZP_04233591.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28]
 gi|229115778|ref|ZP_04245180.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3]
 gi|228667661|gb|EEL23101.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3]
 gi|228680570|gb|EEL34753.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28]
 gi|228686638|gb|EEL40546.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29]
 gi|228708181|gb|EEL60347.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18]
          Length = 473

 Score =  235 bits (599), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 124/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|256829555|ref|YP_003158283.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
           baculatum DSM 4028]
 gi|256578731|gb|ACU89867.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
           baculatum DSM 4028]
          Length = 411

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 114/296 (38%), Positives = 175/296 (59%), Gaps = 2/296 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           ++ + R  +P   E  +LP E  DP+G+  HSP+ GIVHRYPDR+L  +   C  YCR+C
Sbjct: 105 SEALRRCILPDVRETQVLPFETSDPLGEEGHSPVPGIVHRYPDRVLFLVTEFCSTYCRYC 164

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
            R  +VG + G     +  + AL YI++  ++ +V+ +GGDPL L   +++ +L  LR I
Sbjct: 165 TRSRLVG-KAGHRSDMRSWQVALDYIRQHDEVRDVLLSGGDPLTLPAMKIEWLLSQLRAI 223

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            HV+I+R  S+VP V PQRI P L++ L+    P++I++H  HP E + +   A +RLA+
Sbjct: 224 PHVEIVRIGSKVPAVLPQRITPNLVRMLRRY-HPLFISLHFTHPDEITPDTALACNRLAD 282

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
            GI L SQ+VLL G+NDD E +  LM   V  R++PYY++  D   G+SHFR  ++ G  
Sbjct: 283 GGIPLGSQTVLLSGVNDDVETMKRLMHGLVRNRVRPYYMYQCDPIPGSSHFRTPVDTGLS 342

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           I+  L+   SG C P Y++D PGG GKV +     +        + ++ + +  YP
Sbjct: 343 IIQGLRGHTSGYCIPTYVIDAPGGGGKVPLQPGYFQGRDEQGVVLRNYEDRIFHYP 398


>gi|134298608|ref|YP_001112104.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           reducens MI-1]
 gi|134051308|gb|ABO49279.1| L-lysine 2,3-aminomutase [Desulfotomaculum reducens MI-1]
          Length = 406

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/294 (41%), Positives = 180/294 (61%), Gaps = 3/294 (1%)

Query: 19  LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
           L  KE+ D I      + +A+TP  A+LI   +   PI  Q +P  +EL     +  DP+
Sbjct: 41  LTPKEK-DGIAACLKKFRMAITPYYASLIKSEDRQCPIRMQAVPNPKELVCTRGDMRDPL 99

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
            ++  SP+ G+ HRYPDR+LL +   C +YCR C RR + G Q    L     + A +YI
Sbjct: 100 HEDVDSPVPGLTHRYPDRVLLLVTDCCSMYCRHCTRRRIAG-QNDRSLPKAQLDRAFSYI 158

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           +    I +V+ +GGDP  L+ ++L+ +LK LR IKHV+++RF +R P+V PQRI PEL  
Sbjct: 159 RSNPTIRDVVISGGDPFTLADEQLEYILKKLRAIKHVEVIRFGTRTPVVLPQRITPELCN 218

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            L E   PV+I  H NHP E +  + AA++RLA AGI + +QSVLLKGIND   I+  L+
Sbjct: 219 ML-EKYHPVWINTHFNHPREITPASSAAVARLAKAGIPVNNQSVLLKGINDRAHIMKKLV 277

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           +  +++RI+PYYL+  DL+ G  HFR ++  G +I+ +L+   SGL  P Y++D
Sbjct: 278 QGLLKIRIRPYYLYQCDLSEGIGHFRTSVSTGIEIMENLRGHTSGLAVPTYVID 331


>gi|218897268|ref|YP_002445679.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842]
 gi|228900889|ref|ZP_04065104.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222]
 gi|228908066|ref|ZP_04071914.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200]
 gi|228939455|ref|ZP_04102043.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228972309|ref|ZP_04132920.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978923|ref|ZP_04139289.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407]
 gi|218545608|gb|ACK98002.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842]
 gi|228780797|gb|EEM29009.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407]
 gi|228787326|gb|EEM35294.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820155|gb|EEM66192.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228851484|gb|EEM96290.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200]
 gi|228858815|gb|EEN03260.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222]
 gi|326940003|gb|AEA15899.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 473

 Score =  235 bits (599), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|228965278|ref|ZP_04126372.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228794512|gb|EEM42024.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 451

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 124/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|258404824|ref|YP_003197566.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium
           retbaense DSM 5692]
 gi|257797051|gb|ACV67988.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium
           retbaense DSM 5692]
          Length = 440

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 125/352 (35%), Positives = 206/352 (58%), Gaps = 10/352 (2%)

Query: 1   MQLRHK--TLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDP 55
            QLRH    L + + L +      K++Q  +  EI   + +++TP   +LI+  +  NDP
Sbjct: 29  WQLRHSISDLATVEKLLDIEFDPEKRKQYAKTMEI---FPMSVTPYYLSLIDTEDYENDP 85

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           + +Q IP  +EL+I   + +DP+ ++  SP  GI HRYPDR+L  + + C +YCR C R+
Sbjct: 86  VFKQAIPLPDELDIAVHDMKDPLSEDEDSPAPGITHRYPDRVLFHVSNTCSMYCRHCTRK 145

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
             VG     V    D +A L YI+   Q+ +V+ +GGDP +L   ++  +L  LR I+HV
Sbjct: 146 RKVGDSD-FVPCRDDLQAGLDYIRNTPQVRDVLLSGGDPFMLPDHQIDWLLGQLRSIEHV 204

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
           +++R  SR+P+V P RI   L+  LK+   P+++  H NHP E ++ +  A+++LA+AGI
Sbjct: 205 EVIRIGSRMPVVLPYRITDNLVSILKKH-HPLWLNTHFNHPRELTQSSRKALAKLADAGI 263

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
            L +Q+VLL G+ND P ++  L+   V+ R++PYYL+  DL+ G +HFR  + +G +I+ 
Sbjct: 264 PLGNQTVLLAGVNDCPRLMKTLIHKLVQNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIE 323

Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           SL    SG   P Y++D PGG GK+ +  + I   G     + ++  ++  Y
Sbjct: 324 SLIGHTSGFAVPTYVIDAPGGGGKIPVMPNYIVSWGTNKVILRNYEGVITTY 375


>gi|228952639|ref|ZP_04114715.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228807105|gb|EEM53648.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 473

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR + HV+I+R  +R P+
Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREVPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|15614818|ref|NP_243121.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125]
 gi|10174874|dbj|BAB05974.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125]
          Length = 468

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/348 (35%), Positives = 201/348 (57%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +E+ + ++  +    + +TP  A+L+NP +P  PI  Q 
Sbjct: 30  WQLTH-TIRTIDDLKQVINLTEEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 88

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E+     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 89  VPISKEIEKTKYDMEDPLAEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 147

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+ YI +   + +V+ +GGD L+++ + L+ +LK LR I HV+I+R 
Sbjct: 148 QIGMGVPKKQMDAAIDYIAQTPAVRDVLLSGGDGLLINDQILEYILKNLRAIPHVEIIRI 207

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   LK+   PV++  H N   E ++EA  A  +L +AG+ + +Q
Sbjct: 208 GTRAPVVFPQRITDHLCSILKKY-HPVWLNTHFNTSLEITKEAKEACEKLVDAGVPVGNQ 266

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V +R++PYY++  DL+ G SHFR  I +G +I+ +L+  
Sbjct: 267 AVILAGINDSTHIMKKLMHDLVAIRVRPYYVYQCDLSEGISHFRAPISKGIEIMEALRGH 326

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG   P +++D PGG GKV +  + I         + +   ++  YP
Sbjct: 327 TSGYAVPTFVVDAPGGGGKVTLQPNYILSQSPSKTVLRNFEGVISTYP 374


>gi|229085246|ref|ZP_04217488.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44]
 gi|228697965|gb|EEL50708.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44]
          Length = 482

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 197/342 (57%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + +K  +    + +TP  A+L+NP +P  PI  Q +P  EE
Sbjct: 46  TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISEE 105

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 106 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 164

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI +  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 165 PKKQLDDAIAYISQTPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 224

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 225 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 283

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 284 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 343

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 344 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 385


>gi|302038861|ref|YP_003799183.1| l-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii]
 gi|300606925|emb|CBK43258.1| L-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii]
          Length = 377

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 128/327 (39%), Positives = 200/327 (61%), Gaps = 7/327 (2%)

Query: 27  EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPL 86
           EI++I   Y + +TP +   I      D I +Q +P + E+     E +DP+ ++  SP+
Sbjct: 28  EIEDIVGDYPMRITPTVLATIK--EKGDAIWKQVVPDRAEMADADAE-DDPLEEDLMSPV 84

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
             +VHRYPDR+LL + + CP+YCRFC R+ +VG  K   L   + + A+AY++E  ++ +
Sbjct: 85  PHLVHRYPDRVLLMVTNQCPIYCRFCTRKRLVG--KPGFLKKGELDRAIAYLREHQEVRD 142

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           VI +GGDPL+L    L+++LK+LR I H++++R  +RVP   P+RI P+L   +K+   P
Sbjct: 143 VILSGGDPLLLPDHLLERILKSLRTIPHLELIRIGTRVPGSLPERITPKLCDIIKKY-HP 201

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
            Y+ +H NHP E + E   A   LA+AG+ L +Q+VLLKG+NDDPEI+  LM   +  R+
Sbjct: 202 FYMNLHFNHPDELTPEVKRACGMLADAGVPLGAQTVLLKGVNDDPEIMKRLMHQLLLARV 261

Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK-IDTH 325
           KPYYL+  DL  GT+HFR ++E G KI+ SL+   SG+  P +++D PGG GK+  +   
Sbjct: 262 KPYYLYQADLTKGTNHFRTSVETGLKIIKSLQGHTSGMGVPHFVIDAPGGGGKIPLLPAD 321

Query: 326 NIKKVGNGSYCITDHHNIVHDYPPKSS 352
            +  +   S  + ++ N    YP   S
Sbjct: 322 YLVNLDEDSAVLRNYENRTFHYPQPGS 348


>gi|320354450|ref|YP_004195789.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032]
 gi|320122952|gb|ADW18498.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032]
          Length = 373

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/350 (38%), Positives = 193/350 (55%), Gaps = 14/350 (4%)

Query: 7   TLTSAQDLYNANLIKKEQI--------DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
           T+ S Q L +  + + EQ+        + ++ +  HY + ++     LI  H    P+ +
Sbjct: 25  TMPSRQPLSSTFITRPEQLAHALAIPLEPLQAVHAHYPLRISAYYLQLIKQHG--LPLWK 82

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +P  +ELN       DP+ + N SP+  +VH+YPDR L  +   C +YCRFC R+  V
Sbjct: 83  QAVPDLKELND-SSGLVDPLDEENLSPVPCLVHKYPDRALFLVCSECAMYCRFCTRKRKV 141

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G +   V++ +   A L Y+     I +V+ +GGDP +L   RL+++LK LR I  V  +
Sbjct: 142 G-KPDMVINDQTIAAGLEYLARTPAITDVLVSGGDPFMLPLSRLEQILKALRAIPSVVTI 200

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  +RVP   P R+   L   LK+   P+YI  H NHP E + EA  A  RLA+AGI L 
Sbjct: 201 RIGTRVPCTLPSRVTLRLAAMLKKY-HPLYINTHFNHPAEITPEAALACGRLADAGIPLG 259

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
            Q+VLL+G+ND PE +  LMR  + +R+KPYYL   DL  GTSHFR TIE G  I+  L 
Sbjct: 260 CQTVLLRGVNDSPETIKMLMRQLLRIRVKPYYLFQADLTRGTSHFRTTIETGVDIMRQLI 319

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
             +SG+  P Y LD PGG GK+ +  H I  +G  +   T + ++   YP
Sbjct: 320 GHVSGMAVPTYALDAPGGGGKIPLTPHYINSLGK-TLEFTTYRHLPCSYP 368


>gi|256828026|ref|YP_003156754.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577202|gb|ACU88338.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
           baculatum DSM 4028]
          Length = 437

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 119/318 (37%), Positives = 192/318 (60%), Gaps = 4/318 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
           K++   + L      +KE+   ++  +  + +A+TP   +LI+P +  NDP+  Q  P  
Sbjct: 36  KSIEGVERLLGIEFTEKER-KALRNTTEKFPMAITPYYLSLIDPSDYRNDPVFMQAFPST 94

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           +EL I   +  DP+ ++  SP+ G+ HRYPDR+LL + + C +YCR C R+  VG  + +
Sbjct: 95  DELRIESHDMSDPLHEDEDSPVPGLTHRYPDRVLLHVSNTCAMYCRHCTRKRKVG-DRDS 153

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
           + S +D    + YI+   Q+ +V+ +GGDP +LS   L  +L  +  I+HV+++R  +R 
Sbjct: 154 IPSREDLRQGIEYIRNTPQVRDVLLSGGDPFLLSDDMLDWLLTEIGGIEHVEVVRIGTRT 213

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V P RI  EL++ LK+   P++I  H NHP E +  +  A+++LANAGI L +QSVLL
Sbjct: 214 PVVLPYRITDELVEMLKKH-HPLWINTHFNHPAEITASSKQALAKLANAGIPLGNQSVLL 272

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
            G+ND P ++  L    V  R++PYYL+  DL+ G +HFR  I +G +I+ SL+   SG 
Sbjct: 273 AGVNDCPRLIKVLNHKLVRNRVRPYYLYQCDLSEGLTHFRTPIGKGIEILESLRGHTSGF 332

Query: 305 CQPFYILDLPGGYGKVKI 322
             P Y++D PGG GK+ +
Sbjct: 333 SIPTYVVDAPGGGGKIPL 350


>gi|52080665|ref|YP_079456.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580]
 gi|52786038|ref|YP_091867.1| hypothetical protein BLi02294 [Bacillus licheniformis ATCC 14580]
 gi|319645375|ref|ZP_07999608.1| KamA protein [Bacillus sp. BT1B_CT2]
 gi|52003876|gb|AAU23818.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580]
 gi|52348540|gb|AAU41174.1| KamA [Bacillus licheniformis ATCC 14580]
 gi|317393184|gb|EFV73978.1| KamA protein [Bacillus sp. BT1B_CT2]
          Length = 469

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 118/342 (34%), Positives = 200/342 (58%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ + +DL     + KE+ + ++  +    + +TP  A+L+NP +P  PI  Q +P  EE
Sbjct: 36  TVRTLEDLKKVVNLTKEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPLAEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  MHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+ YI++   + +V+ +GGD L+++ + L+ +LK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDQAIGYIRDTPDVRDVLISGGDGLLINDQILEYILKNLRAIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI  +L   LK+   PV++  H N   E ++EA  A  +L NAG+ + +Q+V+L G
Sbjct: 215 VFPQRITDKLCSILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D PGG GK+ I  + +         + +   ++  YP
Sbjct: 334 PTFVVDAPGGGGKIAIQPNYLISQSPDKVVLRNFEGVITSYP 375


>gi|242280776|ref|YP_002992905.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           salexigens DSM 2638]
 gi|242123670|gb|ACS81366.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 437

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 117/314 (37%), Positives = 192/314 (61%), Gaps = 3/314 (0%)

Query: 35  YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
           + +A+TP   +LI+  +  NDP+  Q  P  EEL I   +  DP+ ++  SP+ GI HRY
Sbjct: 64  FPLAITPYYLSLIDEEDYENDPVFLQSFPSPEELKIERCDMTDPLHEDEDSPVPGITHRY 123

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           PDR+L  + ++C +YCR C R+  VG Q  ++ S+   E  + YI+   Q+ +V+ +GGD
Sbjct: 124 PDRVLFHISNLCSMYCRHCTRKRKVGDQD-SIPSTSQLEKGIEYIRNTPQVRDVLLSGGD 182

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           P +LS ++L  +L  +  I+HV+++R  +R+P+V P RI  +L+  LK+   P++I  H 
Sbjct: 183 PFMLSDEKLDWILTKIGEIEHVEVVRIGTRMPVVLPYRITDDLVNMLKKH-HPLWINTHF 241

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E ++ +  AI++LA+AGI L +QSVLL G+ND P ++  L +  V+ R++PYYL+ 
Sbjct: 242 NHPREVTDSSRRAIAKLADAGIPLGNQSVLLAGVNDCPRLIKTLNQKLVKNRVRPYYLYQ 301

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
            DL+ G SHFR  + +G +I+ SL+   SG   P Y++D PGG GK+ +  + I      
Sbjct: 302 CDLSEGLSHFRTPVGKGIEILESLRGHTSGFAVPTYVVDAPGGGGKIPVMPNYIVSWATN 361

Query: 334 SYCITDHHNIVHDY 347
              + ++  ++  Y
Sbjct: 362 KVVLRNYEGVITTY 375


>gi|257470355|ref|ZP_05634446.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
 gi|317064564|ref|ZP_07929049.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
 gi|313690240|gb|EFS27075.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
          Length = 415

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 116/315 (36%), Positives = 193/315 (61%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           + S +DL     +  E+ + +K+      +A+TP   +L++ ++PN P+ +Q IP  +E+
Sbjct: 30  IESLEDLKKYITLSAEEEEGVKKTLETLRMAVTPYYFSLMDNNDPNCPVRKQAIPSIKEI 89

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   G+    +  
Sbjct: 90  HQAEADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGASDDAMPM 149

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
            +  + A+ YI +  Q+ +V+ +GGD L++S + L+ ++  LR I HV+I+R  SR P+V
Sbjct: 150 DR-IDKAIEYIAKTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRIGSRTPVV 208

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI PEL++ LK+   P+++  H NHP E + E+  A   LANAGI L +QSVLL+GI
Sbjct: 209 LPQRITPELVEMLKKY-HPIWLNTHFNHPKEVTPESKKACELLANAGIPLGNQSVLLRGI 267

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   ++  L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   P
Sbjct: 268 NDCVHVMKKLVHELVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVP 327

Query: 308 FYILDLPGGYGKVKI 322
            +++D PGG GK  +
Sbjct: 328 TFVVDAPGGGGKTPV 342


>gi|30262308|ref|NP_844685.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames]
 gi|47527599|ref|YP_018948.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185154|ref|YP_028406.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne]
 gi|49479498|ref|YP_036410.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52143159|ref|YP_083670.1| lysine 2,3-aminomutase [Bacillus cereus E33L]
 gi|65319605|ref|ZP_00392564.1| COG1509: Lysine 2,3-aminomutase [Bacillus anthracis str. A2012]
 gi|118477725|ref|YP_894876.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam]
 gi|165870485|ref|ZP_02215139.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488]
 gi|167632881|ref|ZP_02391207.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442]
 gi|167639704|ref|ZP_02397974.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193]
 gi|170686947|ref|ZP_02878166.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465]
 gi|170706603|ref|ZP_02897062.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389]
 gi|177649254|ref|ZP_02932256.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174]
 gi|190565714|ref|ZP_03018634.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I]
 gi|196033856|ref|ZP_03101267.1| L-lysine 2,3-aminomutase [Bacillus cereus W]
 gi|196040024|ref|ZP_03107327.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99]
 gi|196043261|ref|ZP_03110499.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108]
 gi|206974107|ref|ZP_03235025.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97]
 gi|217959809|ref|YP_002338361.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187]
 gi|218903441|ref|YP_002451275.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820]
 gi|222095894|ref|YP_002529951.1| lysine 2,3-aminomutase [Bacillus cereus Q1]
 gi|225864277|ref|YP_002749655.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102]
 gi|227814883|ref|YP_002814892.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684]
 gi|228914904|ref|ZP_04078509.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228927370|ref|ZP_04090427.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228933607|ref|ZP_04096457.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228945921|ref|ZP_04108264.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228985395|ref|ZP_04145554.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229091290|ref|ZP_04222508.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42]
 gi|229121855|ref|ZP_04251075.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201]
 gi|229139003|ref|ZP_04267580.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26]
 gi|229155888|ref|ZP_04283989.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342]
 gi|229184527|ref|ZP_04311730.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1]
 gi|229196526|ref|ZP_04323270.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293]
 gi|229601618|ref|YP_002866645.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248]
 gi|254684881|ref|ZP_05148741.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CNEVA-9066]
 gi|254722289|ref|ZP_05184077.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A1055]
 gi|254737328|ref|ZP_05195032.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254743487|ref|ZP_05201172.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Kruger B]
 gi|254751644|ref|ZP_05203681.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Vollum]
 gi|254760163|ref|ZP_05212187.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Australia 94]
 gi|301053835|ref|YP_003792046.1| lysine 2,3-aminomutase [Bacillus anthracis CI]
 gi|30256939|gb|AAP26171.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames]
 gi|47502747|gb|AAT31423.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49179081|gb|AAT54457.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne]
 gi|49331054|gb|AAT61700.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|51976628|gb|AAU18178.1| lysine 2,3-aminomutase [Bacillus cereus E33L]
 gi|118416950|gb|ABK85369.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam]
 gi|164713640|gb|EDR19163.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488]
 gi|167512413|gb|EDR87789.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193]
 gi|167531693|gb|EDR94358.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442]
 gi|170128334|gb|EDS97202.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389]
 gi|170668998|gb|EDT19742.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465]
 gi|172084328|gb|EDT69386.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174]
 gi|190563741|gb|EDV17706.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I]
 gi|195993536|gb|EDX57493.1| L-lysine 2,3-aminomutase [Bacillus cereus W]
 gi|196025570|gb|EDX64239.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108]
 gi|196029283|gb|EDX67887.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99]
 gi|206748263|gb|EDZ59652.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97]
 gi|217065467|gb|ACJ79717.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187]
 gi|218537953|gb|ACK90351.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820]
 gi|221239952|gb|ACM12662.1| lysine 2,3-aminomutase [Bacillus cereus Q1]
 gi|225789207|gb|ACO29424.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102]
 gi|227005066|gb|ACP14809.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684]
 gi|228586882|gb|EEK44956.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293]
 gi|228598938|gb|EEK56555.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1]
 gi|228627495|gb|EEK84221.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342]
 gi|228644358|gb|EEL00613.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26]
 gi|228661644|gb|EEL17264.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201]
 gi|228692056|gb|EEL45797.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42]
 gi|228774348|gb|EEM22755.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228813795|gb|EEM60073.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228826067|gb|EEM71850.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228832266|gb|EEM77846.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228844700|gb|EEM89746.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229266026|gb|ACQ47663.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248]
 gi|300376004|gb|ADK04908.1| lysine 2,3-aminomutase [Bacillus cereus biovar anthracis str. CI]
 gi|324326330|gb|ADY21590.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 473

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  ++ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|42781397|ref|NP_978644.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987]
 gi|42737319|gb|AAS41252.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987]
          Length = 473

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  ++ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|47565659|ref|ZP_00236699.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241]
 gi|47557295|gb|EAL15623.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241]
          Length = 473

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  ++ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|85860656|ref|YP_462858.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
 gi|85723747|gb|ABC78690.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
          Length = 486

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/350 (35%), Positives = 205/350 (58%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            QLRH  K L + + L +  L +  +  + K I   + +++TP   +LI+  +  NDP+ 
Sbjct: 80  WQLRHCIKDLDTFETLLDIRLPETLR-RQFKLIVEKFPMSITPYYLSLIDTEDLENDPVF 138

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q  P   EL++   +  DP+ ++  SP+ G+ HRYPDR+LL + + C +YCR C R+  
Sbjct: 139 KQSFPAINELDVQSTDMSDPLHEDRDSPVPGLTHRYPDRVLLLISNTCAMYCRHCTRKRR 198

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG  + T+ S +     + YI++  Q+ +V+ +GGDP +LS   L  +L  L+ I+HV++
Sbjct: 199 VGD-RDTIPSREQIMKGIEYIRDTPQVRDVLLSGGDPFLLSTDYLDWILIELKKIEHVEV 257

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P V P RI  EL++ LK+   P++I  H NHP E +  + AA+ +LA+AGI L
Sbjct: 258 IRIGTRTPAVLPYRITDELVEMLKKH-HPLWINTHFNHPRELTASSRAALRKLADAGIPL 316

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P I+ +L+   V  R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 317 GNQSVLLSGVNDCPRIMRSLVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 376

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG C P Y++D P G GK+ +  + +         + ++  ++  Y
Sbjct: 377 IGHTSGFCVPTYVIDAPAGGGKIPVMPNYLISWSTNKVVLRNYEGVITTY 426


>gi|228921012|ref|ZP_04084347.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838558|gb|EEM83864.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 473

 Score =  233 bits (595), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+ YI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDDAITYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|229017613|ref|ZP_04174507.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273]
 gi|229023830|ref|ZP_04180315.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272]
 gi|228737515|gb|EEL88025.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272]
 gi|228743682|gb|EEL93788.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273]
          Length = 472

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  ++ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 375


>gi|163940087|ref|YP_001644971.1| lysine 2,3-aminomutase YodO family protein [Bacillus
           weihenstephanensis KBAB4]
 gi|229011567|ref|ZP_04168753.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048]
 gi|229133129|ref|ZP_04261965.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196]
 gi|229167131|ref|ZP_04294874.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621]
 gi|163862284|gb|ABY43343.1| lysine 2,3-aminomutase YodO family protein [Bacillus
           weihenstephanensis KBAB4]
 gi|228616365|gb|EEK73447.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621]
 gi|228650338|gb|EEL06337.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196]
 gi|228749722|gb|EEL99561.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048]
          Length = 472

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 122/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  ++ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 375


>gi|162455543|ref|YP_001617910.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
 gi|161166125|emb|CAN97430.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
          Length = 411

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/354 (36%), Positives = 194/354 (54%), Gaps = 6/354 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNPNDPIARQF 60
           QLRH  L+SA +L+ A  +  E++   +        I +TP   +L +  +P  PI RQ 
Sbjct: 59  QLRH-ALSSADELHGALSLTPEELAGARRAEKAGLPIRVTPYYLSLCDNADPACPIRRQC 117

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E   +P +  DP+G+  H     +V RYPDR LL     C VYCRFC R  MVG 
Sbjct: 118 VPLADESAEVPGDLVDPLGEVAHEVAPHLVQRYPDRALLLATDRCAVYCRFCTRSRMVGD 177

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             G V   +    A+AY++   ++ +VI +GGDPL +S  R+ +++  LR I+ V+ +R 
Sbjct: 178 GGGAVALER-LAPAMAYLEAHPEVRDVIVSGGDPLAVSTDRVVRLIARLRQIQSVETIRL 236

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  PQRI  EL++ LK    P+++  H NHP E +  A  A  RLA+ G  +++Q
Sbjct: 237 ATRVPVTLPQRITAELVRALKPY-HPLWVMTHFNHPKELTPAAERACKRLADHGFPVMNQ 295

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GINDD   LA L R  V  R++PYYL   D   GT+H R  +  G  ++  L+ +
Sbjct: 296 TVLLRGINDDATTLATLFRGLVRWRVRPYYLLQMDPVRGTAHLRTPLATGVSLMEQLQGR 355

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY--PPKSS 352
           ++G+  P  I+D PGG GKV I    +     G   +  H  +  +Y  PP  S
Sbjct: 356 LTGIALPKLIVDTPGGMGKVPIGPEYVVDRRPGRTVLRTHRGVEVEYVDPPAGS 409


>gi|73668214|ref|YP_304229.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro]
 gi|72395376|gb|AAZ69649.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro]
          Length = 414

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 127/350 (36%), Positives = 205/350 (58%), Gaps = 5/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH+ + + ++L     + + + ++IK+    + +A++P  A+LI+P +PN PI  Q 
Sbjct: 16  WQYRHR-IETVEELEKLIKLSEPEKEDIKKALEVFPMAISPYYASLIDPKDPNCPIRMQA 74

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           +P   EL     E EDP+ ++  SP +   I HRYPDR+L  + + C +YCR C R+  V
Sbjct: 75  VPSSAELKKSSWELEDPLCEDRDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 134

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G+++    S K     + YI+E S+I +V+ +GGD L++S +RL  +L  L  I HV+I+
Sbjct: 135 GNREYD-YSEKAIREGIEYIREHSEIRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIV 193

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  SRVP+  PQRI PEL + L E    V++  H NHP E + EA  A+  LA AG+ L 
Sbjct: 194 RLGSRVPVTLPQRITPELCEIL-EKYPSVWLNTHFNHPKEITPEAKKAMRMLAKAGVPLG 252

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +QSVLL+G+ND P I+  L    ++++ +PYYL+  DL+ G  HFR  +  G +I+  L+
Sbjct: 253 NQSVLLRGVNDCPMIIKKLCHELLKIKTRPYYLYQCDLSFGLEHFRTPVSRGIEIIEMLR 312

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
              SGL  P +++D PGG GK+ +  + +    +    + ++  ++  YP
Sbjct: 313 GHTSGLAVPTFVIDAPGGGGKIPVGPNYLISSSDTGVVLRNYEGVICMYP 362


>gi|73748466|ref|YP_307705.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
 gi|73660182|emb|CAI82789.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
          Length = 439

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TS  ++     +  E+  ++  +S  + ++ TP   +L++  N NDP+  Q IP   EL
Sbjct: 65  VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQLIPDTAEL 124

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
                   DP+ + + S + G+VHRYPDR+++ L  +CPV CR C R+       G V +
Sbjct: 125 CFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             + +A LAYI++   I +VI +GGDPL LS  RL+ VL  LR I HV+I+R  +R P+V
Sbjct: 184 QAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSISHVEIIRIGTRYPVV 243

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI+ EL   L + G P+++  H NHP E ++E+  A  RL  AG+ + +QSVLLKGI
Sbjct: 244 LPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQSVLLKGI 302

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   +   L    +  +++PYYL   D   GT HF   IE G  I+  L+   SGL  P
Sbjct: 303 NDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYTSGLAVP 362

Query: 308 FYILDLPGGYGKVKI 322
            Y++DLPGG GK+ I
Sbjct: 363 NYVIDLPGGGGKITI 377


>gi|229161268|ref|ZP_04289255.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803]
 gi|228622364|gb|EEK79203.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803]
          Length = 473

 Score =  233 bits (594), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 122/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+ YI++  Q+ +V+ +GGD L+++ K L+ VLK+LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKSLREIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|124485172|ref|YP_001029788.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
 gi|124362713|gb|ABN06521.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
          Length = 453

 Score =  233 bits (594), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 130/350 (37%), Positives = 202/350 (57%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+RH  +++   Q +       KE+ +E++     + I++TP   +LI+  +  NDPI 
Sbjct: 43  WQVRHAVRSIDMVQQVLGITFDPKER-EELQRTVEKFPISITPYYLSLIDTEDYRNDPIF 101

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ  P   EL +   E  DP+ ++  SP + I HRYPDR+L  + + C +YCR C R+  
Sbjct: 102 RQAFPSPAELIVENYELSDPLAEDKDSPCECITHRYPDRVLFLVSNTCAMYCRHCTRKRK 161

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG  K ++   +     +AYI+E +QI +V+ +GGDP +LS + L  +L  L  I HV++
Sbjct: 162 VGD-KDSIPDREKILEGIAYIRENTQIRDVLLSGGDPFMLSDESLDWILTELTAIPHVEV 220

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +RVP+V P RI  +L+  LK+  KP++I    NHP E +  A AA+++L +AGI L
Sbjct: 221 IRIGTRVPVVLPFRITNQLVDILKKH-KPIWINTQFNHPKEMTPSAQAAVAKLVDAGIPL 279

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL  IND P I+  L+   V+ RI+PYYL+  DL+ G SHFR  I +G +I+ SL
Sbjct: 280 GNQSVLLARINDCPVIMKELVHQLVKNRIRPYYLYQCDLSEGISHFRTPIAKGIEIMESL 339

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D PGG GK+ +  + +         + ++  I+  Y
Sbjct: 340 IGHTSGFAVPRYVVDAPGGGGKIPVSPNYLLTWSVNKVVLRNYEGIICTY 389


>gi|229059963|ref|ZP_04197337.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603]
 gi|228719376|gb|EEL70980.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603]
          Length = 472

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  ++ + +K  +    + +TP  A L+NP +P  PI  Q +P  EE
Sbjct: 36  TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI E  Q+ +V+ +GGD L+++ K L+ VLK LR I H++I+R  +R P+
Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHIEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 375


>gi|229030019|ref|ZP_04186084.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271]
 gi|228731280|gb|EEL82197.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271]
          Length = 478

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 200/347 (57%), Gaps = 4/347 (1%)

Query: 7   TLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           T+ +  DL    NLI +E+ + +K  +    + +TP  A L+NP +P  PI  Q +P  E
Sbjct: 36  TIKTLDDLKKVINLIPEEE-EGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISE 94

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  
Sbjct: 95  ELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMG 153

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           +  K  + A+ YI++  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P
Sbjct: 154 VPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAP 213

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L 
Sbjct: 214 VVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQAVILA 272

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG  
Sbjct: 273 GINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYA 332

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 333 VPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|301166000|emb|CBW25574.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 340

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 122/271 (45%), Positives = 171/271 (63%), Gaps = 7/271 (2%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           + P+A QF+PQ  E ++  E   DPIGD+N SPL  IVHRY +RIL     VCPV CR+C
Sbjct: 49  DSPLANQFLPQVSENDLGGES--DPIGDHNQSPLAQIVHRYENRILFFPTQVCPVICRYC 106

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FR+  +G+     L   + E  L Y+++ S+I E+IF+GGDPLILS +R++  L   + I
Sbjct: 107 FRKNELGTNDE--LFKANFEKVLEYLKQHSEINEIIFSGGDPLILSDERIEFYLNEFKKI 164

Query: 173 KHVQILRFHSRVPIVDPQRINP---ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
            H++ +RFH+R PI+ P RI     ++I+  K+    +   IH NH  EF+EE   A+S 
Sbjct: 165 PHIKFIRFHTRTPIILPSRITENFCKIIENFKKDFLQINFIIHVNHSQEFNEENKVALSL 224

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L      LLSQSVLLKG+N+  + L  L+   ++L I+PYYLHHPD   G  HF LT+EE
Sbjct: 225 LHAHCSNLLSQSVLLKGVNNSKQALLKLIDELIKLNIRPYYLHHPDKVKGGLHFMLTLEE 284

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           G+ + A+L+  + G   P YI+D+PGG GKV
Sbjct: 285 GRNLYATLRNHLPGWALPQYIIDIPGGEGKV 315


>gi|289432513|ref|YP_003462386.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
 gi|288946233|gb|ADC73930.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
          Length = 439

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TS  ++     +  E+  ++  +S  + ++ TP   +L++  N NDP+  Q IP   EL
Sbjct: 65  VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQLIPDTAEL 124

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
                   DP+ + + S + G+VHRYPDR+++ L  +CPV CR C R+       G V +
Sbjct: 125 CFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             + +A LAYI++   I +VI +GGDPL LS  RL+ VL  LR I HV+I+R  +R P+V
Sbjct: 184 QAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRIGTRYPVV 243

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI+ EL   L + G P+++  H NHP E ++E+  A  RL  AG+ + +QSVLLKGI
Sbjct: 244 LPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQSVLLKGI 302

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   +   L    +  +++PYYL   D   GT HF   IE G  I+  L+   SGL  P
Sbjct: 303 NDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYTSGLAVP 362

Query: 308 FYILDLPGGYGKVKI 322
            Y++DLPGG GK+ I
Sbjct: 363 NYVIDLPGGGGKITI 377


>gi|147669246|ref|YP_001214064.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
 gi|146270194|gb|ABQ17186.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
          Length = 439

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TS  ++     +  E+  ++  +S  + ++ TP   +L++  N NDP+  Q IP   EL
Sbjct: 65  VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQLIPDTAEL 124

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
                   DP+ + + S + G+VHRYPDR+++ L  +CPV CR C R+       G V +
Sbjct: 125 CFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             + +A LAYI++   I +VI +GGDPL LS  RL+ VL  LR I HV+I+R  +R P+V
Sbjct: 184 QAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRIGTRYPVV 243

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI+ EL   L + G P+++  H NHP E ++E+  A  RL  AG+ + +QSVLLKGI
Sbjct: 244 LPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQSVLLKGI 302

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   +   L    +  +++PYYL   D   GT HF   IE G  I+  L+   SGL  P
Sbjct: 303 NDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYTSGLAVP 362

Query: 308 FYILDLPGGYGKVKI 322
            Y++DLPGG GK+ I
Sbjct: 363 NYVIDLPGGGGKITI 377


>gi|256846428|ref|ZP_05551885.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2]
 gi|256718197|gb|EEU31753.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2]
          Length = 425

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 196/340 (57%), Gaps = 2/340 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           L S +DL     + +E+ + +        +A+TP   +LI+ ++   PI +Q IP  +E+
Sbjct: 30  LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQAIPTIQEI 89

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS    +  
Sbjct: 90  HQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPM 149

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
            +  + A+ YI +  Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R  SR P+V
Sbjct: 150 DR-IDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRIGSRTPVV 208

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI PEL   LK+   P+++  H NHP E + EA  A   LA+AGI L +Q+VLL+G+
Sbjct: 209 LPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQTVLLRGV 267

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   P
Sbjct: 268 NDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVP 327

Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            +++D PGG GK  +    +     G   + +   ++  Y
Sbjct: 328 TFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367


>gi|229172992|ref|ZP_04300544.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3]
 gi|228610512|gb|EEK67782.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3]
          Length = 473

 Score =  232 bits (592), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 125/347 (36%), Positives = 200/347 (57%), Gaps = 4/347 (1%)

Query: 7   TLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           T+ +  DL    NLI +E+ + +K  +    + +TP  A L+NP +P  PI  Q +P  E
Sbjct: 36  TIKTLDDLKKVINLIPEEE-EGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISE 94

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  
Sbjct: 95  ELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMG 153

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           +  K  + A+ YI++  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P
Sbjct: 154 VPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAP 213

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L 
Sbjct: 214 VVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILA 272

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG  
Sbjct: 273 GINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYA 332

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 333 VPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|34763498|ref|ZP_00144440.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|237741285|ref|ZP_04571766.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13]
 gi|294784507|ref|ZP_06749796.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27]
 gi|27886827|gb|EAA23958.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|229430817|gb|EEO41029.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13]
 gi|294487723|gb|EFG35082.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27]
          Length = 425

 Score =  232 bits (592), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 196/340 (57%), Gaps = 2/340 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           L S +DL     + +E+ + +        +A+TP   +LI+ ++   PI +Q IP  +E+
Sbjct: 30  LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQAIPTIQEI 89

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS    +  
Sbjct: 90  HQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPM 149

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
            +  + A+ YI +  Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R  SR P+V
Sbjct: 150 DR-IDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRIGSRTPVV 208

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI PEL   LK+   P+++  H NHP E + EA  A   LA+AGI L +Q+VLL+G+
Sbjct: 209 LPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQTVLLRGV 267

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   P
Sbjct: 268 NDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVP 327

Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            +++D PGG GK  +    +     G   + +   ++  Y
Sbjct: 328 TFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367


>gi|289524159|ref|ZP_06441013.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502815|gb|EFD23979.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 442

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 115/286 (40%), Positives = 180/286 (62%), Gaps = 2/286 (0%)

Query: 37  IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           +A+TP  A L++P++ N PI  Q +P   E N   E+  DP+ ++ ++P+ G VHRYPDR
Sbjct: 58  MAITPYYATLMDPNDINCPIRMQAVPTSAERNTAEEDFHDPLAEDRYAPVPGFVHRYPDR 117

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L +   C +YCRFC RR   G +     S ++ +AA+ YI+    + +++ TGGDPL 
Sbjct: 118 GILLVTDQCSMYCRFCTRRRFAG-EIDRPKSREEIQAAIDYIERTPVLRDILVTGGDPLT 176

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           +  + L+ +L +LR I HV+I+R  +RVP V PQRI   L+  LK+   P++I +H NHP
Sbjct: 177 MEDENLEWLLTSLRRIPHVEIIRIGTRVPAVMPQRITNSLVTMLKKF-HPLWINVHFNHP 235

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E +  +  A++ LANAGI L +QSVLL+GIND P I   L    +  R++PYY++  DL
Sbjct: 236 KEITPHSARALNMLANAGIPLGNQSVLLRGINDCPYIFKELFHKLLVNRVRPYYIYQCDL 295

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           + G SHFR ++ +G +I+  L+   +G+  P +++D PGG GK+ +
Sbjct: 296 SRGISHFRTSVGKGIEIIEFLRGHTTGMAVPTFVIDAPGGGGKIPV 341


>gi|95931361|ref|ZP_01314073.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
 gi|95132577|gb|EAT14264.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
          Length = 345

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 128/321 (39%), Positives = 184/321 (57%), Gaps = 6/321 (1%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           + ++   Y + +TP    LI     +DP+  Q IP   EL +      DP+ +   SP+ 
Sbjct: 29  LAQVVERYPMRITPHQFELIR--QADDPLGCQVIPDPREL-LDDSLLVDPLNEEQLSPVP 85

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
            +VHRYP R+LL +   C  YCRFC R+  VG    +V S  D    + YI E  ++ EV
Sbjct: 86  HLVHRYPYRVLLLVAGSCFSYCRFCTRKRKVGCSSMSV-SLGDILKGIDYIAEHPEVNEV 144

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           I +GGDPL +S + L  VL  L  I H+Q++R  SR P+V P+RI   L   L+   +PV
Sbjct: 145 ILSGGDPLTMSDRLLDDVLARLSRIPHLQVVRIGSRAPVVMPERITDALCALLRRY-QPV 203

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           Y   H NHP E +E  + A  RL  +G+I+ +Q+VLL+G+ND+ E L  L  T   L+I+
Sbjct: 204 YFLTHFNHPREITEATVEACQRLVRSGVIVANQTVLLRGVNDNSETLFKLFHTLYRLQIR 263

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
           PYYLH  DL  GTSHFR  +E+G  I+  L+  +SGL  P YI+DLPGG+GKV +    +
Sbjct: 264 PYYLHQMDLTCGTSHFRTRLEDGIAIMDDLRGPLSGLAVPSYIVDLPGGHGKVPVTPDYV 323

Query: 328 KKVGNGSYCITDHHNIVHDYP 348
           +++G+ +        +V DYP
Sbjct: 324 QRLGDHARLRAADGTLV-DYP 343


>gi|226315087|ref|YP_002774983.1| lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599]
 gi|226098037|dbj|BAH46479.1| probable lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599]
          Length = 454

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 202/348 (58%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     +  E+ + ++  +    + +TP  A+L++P +P+DP+  Q 
Sbjct: 30  WQLTH-TIKTVDDLKQVINLTPEEEEGVRISTQTIPLNITPYYAHLMDPDDPSDPVRMQS 88

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E+     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 89  VPLSSEMVRTKYDMEDPLHEDTDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 147

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +A + YI+ + ++ +V+ +GGD L+++ + L+ ++ +LR I HV+I+R 
Sbjct: 148 QIGMGVPKKQLDACIDYIRSRPEVRDVLLSGGDGLLINDRVLEYIISSLRDIPHVEIIRI 207

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   LK+   PV++  H NHP E + EA  A   LANAG+ L +Q
Sbjct: 208 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNHPKEITPEAKLACEMLANAGVPLGNQ 266

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND    +  L++  V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 267 AVILAGINDCANTMKKLVQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGIEIIEHLRGH 326

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG   P +++D P G GK+ +  + I    +    + +   ++  YP
Sbjct: 327 TSGYAVPTFVVDAPHGGGKIPVSPNYIISQASDKVVLRNFEGVITSYP 374


>gi|325281770|ref|YP_004254312.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
 gi|324313579|gb|ADY34132.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
          Length = 416

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 126/321 (39%), Positives = 195/321 (60%), Gaps = 4/321 (1%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           I+E      +A+TP   +LI+P NP  PI +Q +P  EEL+  P + EDP+ ++  SP+ 
Sbjct: 48  IRESLKTLRMAITPYYLSLIDPDNPYCPIRKQSVPTIEELHRSPADLEDPLHEDGDSPVP 107

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWE 146
           G+ HRYPDR+L  +  +C +YCR C RR   G     T L   D    + YI    Q+ +
Sbjct: 108 GLTHRYPDRVLFLITDMCSMYCRHCTRRRFAGHHDCATPLERID--KCIEYIANTPQVRD 165

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           V+ +GGD L++S +RL+ ++K LR I HV+I+R  SR P+V PQRI PEL+  L++   P
Sbjct: 166 VLLSGGDALLVSDERLEYIIKRLRGIPHVEIIRIGSRTPVVLPQRITPELVNMLRKY-HP 224

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
           +++  H NHP E +EE+ AA +RLA+AGI L +QSVLL+GIND   ++  L+   V++R+
Sbjct: 225 IWLNTHFNHPNEITEESAAACARLADAGIPLGNQSVLLRGINDCTHVMKKLVHELVKIRV 284

Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +PYY++  DL+ G  HFR  + +G +I+ +L+   SG   P +++D PGG GK+ +    
Sbjct: 285 RPYYIYICDLSVGIGHFRTPVSKGIEIIENLRGHTSGYAVPTFVVDAPGGGGKIPVMPTY 344

Query: 327 IKKVGNGSYCITDHHNIVHDY 347
           +   G     + +   +V  Y
Sbjct: 345 LISQGPNRVVLRNFEGVVTTY 365


>gi|288817647|ref|YP_003431994.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6]
 gi|288787046|dbj|BAI68793.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6]
 gi|308751245|gb|ADO44728.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobacter
           thermophilus TK-6]
          Length = 367

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 119/313 (38%), Positives = 191/313 (61%), Gaps = 1/313 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           L + +D+     +  E+++ I+     Y +A+TP   +LI P +PNDPI  Q IP++EE+
Sbjct: 24  LKTREDIQKYIKLLPEEVEGIERTKGIYPLAITPHYFSLIEPEDPNDPIRLQCIPRREEV 83

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +   +   +P        + G+ HRY DR+LL +   C VYCR C R+ +  +Q     S
Sbjct: 84  DENAQRLGEPDPFREEGQVPGLTHRYRDRVLLSVTTFCAVYCRHCMRKRIF-AQGERSRS 142

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
           +++    + YI+E  +I +V+ +GG+PL LS+++L+ +L  LR IKHV+I+RF +R+ ++
Sbjct: 143 TEELRKMIEYIKEHEEIRDVLISGGEPLSLSYEKLEYLLSQLRKIKHVEIIRFGTRLLVL 202

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQR     +  + E   P++I  H NHP E +EEA  A+ RL   GI + +Q+VLLKG+
Sbjct: 203 APQRFFDNKLLDILEKYSPIWINTHFNHPKEITEEAEEAVERLLRRGIPINNQTVLLKGV 262

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND+P+ +  L R  + +++KP YL H D   G  HFR +I++G +I+  L+ +ISG+  P
Sbjct: 263 NDNPQTMLELFRGLLRIKVKPQYLFHCDPVKGAVHFRTSIDKGLEIMEYLRGRISGMGIP 322

Query: 308 FYILDLPGGYGKV 320
            Y +DLPGG GKV
Sbjct: 323 TYAVDLPGGKGKV 335


>gi|2529467|gb|AAB81159.1| YokS [Bacillus subtilis subsp. subtilis str. 168]
          Length = 471

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 117/348 (33%), Positives = 204/348 (58%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +++ + ++  +    + +TP  A+L++P NP  P+  Q 
Sbjct: 31  WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  S + G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLHEDEDSRVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++++R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L + LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG   P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYP 375


>gi|13471862|ref|NP_103429.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
 gi|14022606|dbj|BAB49215.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
          Length = 367

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/315 (40%), Positives = 182/315 (57%), Gaps = 3/315 (0%)

Query: 34  HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
           H+ +       +LI+ ++P DPI  Q IP  +EL     E  DPI D++ SP+  + HR+
Sbjct: 49  HHKVRAPKAYLDLIDWNDPADPIRAQVIPSPDELEEAEGELGDPIADHDFSPVPRLTHRH 108

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
            DR+LL   + C VYCRFCFR+E + S  G   + +  E ALAYI +  +I EVI TGGD
Sbjct: 109 TDRVLLFPTYQCAVYCRFCFRKESLTS-IGRGYTREALEPALAYIADHPEIREVILTGGD 167

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL L  K L +++  +  I HV++LR H+RVP+  P RI   L+  L +    V +  H 
Sbjct: 168 PLSLPDKALAEIVARIEAIPHVRLLRIHTRVPVALPSRITSGLVAAL-QGRLMVTVVTHF 226

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272
           NH  E +     A   +  AG +LL+QSVLLKG+ND  E+L  L R  +  L +KPYYLH
Sbjct: 227 NHAREITPATEVACRTMRQAGFVLLNQSVLLKGVNDTVEVLEELCRELMYRLGVKPYYLH 286

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
           H DLA G +H R TI +GQ +V +L+ ++SG+C P Y+LDLP G GKV +    I+    
Sbjct: 287 HGDLARGMAHRRTTIAQGQALVEALRARLSGICNPVYVLDLPEGGGKVPLGPCPIEGREG 346

Query: 333 GSYCITDHHNIVHDY 347
            ++ I      +  Y
Sbjct: 347 DTWRIRGQDGAMRTY 361


>gi|150399966|ref|YP_001323733.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
           SB]
 gi|150012669|gb|ABR55121.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
           SB]
          Length = 433

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 118/322 (36%), Positives = 198/322 (61%), Gaps = 3/322 (0%)

Query: 27  EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
           EI++    + +++TP  A+LI+  N   DPI +Q +  K+EL +   E EDP+ ++  SP
Sbjct: 57  EIQKAIEVFPMSITPYYASLIDISNLKKDPIYKQSVASKKELIMEDFEMEDPLAEDKDSP 116

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           + GI HRYPDR+L  +   C +YCR C R+  V S+  +  S ++ + A+ YI+E  ++ 
Sbjct: 117 VIGITHRYPDRVLFYVNPNCAMYCRHCTRKRKV-SESESNPSKEEIQKAIDYIKEHPEVR 175

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +V+ +GGDPL+LS   L  +L  +  I+HV+++R  SRVP+V PQRI   L+  LK+   
Sbjct: 176 DVLLSGGDPLLLSDDYLDWILSEISSIEHVELIRIGSRVPVVLPQRITDNLVNILKKY-H 234

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           P+++  H NH  E ++ ++ A+ +L+NAGI + +Q+VLL G+ND P ++  L +  V  R
Sbjct: 235 PIWVNTHFNHVVEITDTSVEALDKLSNAGIPIGNQTVLLSGVNDCPYVMRKLNQKLVSSR 294

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           ++PYYL+  DL+ G SHFR +I +G +I+ SL    +G   P Y++D PGG GK+ +  +
Sbjct: 295 VRPYYLYQCDLSKGISHFRTSISKGLEIIESLIGHTTGFAVPRYVVDAPGGGGKIPVMPN 354

Query: 326 NIKKVGNGSYCITDHHNIVHDY 347
            +   G+    + ++  ++  Y
Sbjct: 355 YVVSWGSDRVILRNYEGVITTY 376


>gi|160902541|ref|YP_001568122.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95]
 gi|160360185|gb|ABX31799.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95]
          Length = 436

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 122/347 (35%), Positives = 201/347 (57%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLR++ +T  + L     +  E+   IK       +A+TP  A L++P NP  PI RQ 
Sbjct: 26  WQLRNR-ITDVEKLRQIINLTPEEEQGIKNTLKTLRMAITPYFATLMDPDNPKCPIRRQA 84

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +EL   P ++ DP+ ++  SP  G+ HRYPDR+L  +  +C +YCR C RR   G 
Sbjct: 85  VPSSKELIKGPWDQIDPLHEDADSPAPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 143

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q  +     + +A+L YI++  Q+ +V+ +GGD L+     L+ +L  L+ I HV+++R 
Sbjct: 144 QTDSNRKRNEIDASLQYIRDTPQVRDVLLSGGDALMAGIPILEYILSELKKIPHVEVVRI 203

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+V PQ I   L+  LK+   P+++    NHP E + E+  A  +LA+AGI L +Q
Sbjct: 204 GTRVPVVFPQLITDNLVNVLKKY-HPLWLNTQFNHPKEITPESAEACRKLADAGIPLGNQ 262

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND   I+  L+   V++R++PYYL+  DL+ G  HFR ++ +G +I+ SL   
Sbjct: 263 SVLLRGVNDSKYIIMELVHELVKIRVRPYYLYQCDLSQGIEHFRTSVSKGIEIMESLIGH 322

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK++I  + +      +  + ++  ++  Y
Sbjct: 323 TSGFAIPEFVVDAPGGGGKIRIMPNYLISQNKDTVILRNYEGVISTY 369


>gi|311030470|ref|ZP_07708560.1| L-lysine 2,3-aminomutase [Bacillus sp. m3-13]
          Length = 473

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 120/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ + +DL     +  E+ + +K  +    + +TP  A+L+NP +P  PI  Q +P  +E
Sbjct: 36  TIRTLEDLKQVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISKE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  IYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  +AA+AYI    QI + + +GGD L+++ + L+ +LK LR I H++I+R  +R P+
Sbjct: 155 PKKQLDAAIAYIASNDQIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   LK+   PV++  H N   E +EE+  A   L NAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKLACEMLVNAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  I +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D PGG GK+ +  + I         + +   ++  YP
Sbjct: 334 PTFVVDAPGGGGKIAVQPNYIISQSANKVVLRNFEGVITTYP 375


>gi|307353610|ref|YP_003894661.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
           petrolearius DSM 11571]
 gi|307156843|gb|ADN36223.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
           petrolearius DSM 11571]
          Length = 437

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 118/300 (39%), Positives = 181/300 (60%), Gaps = 5/300 (1%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDN 81
           E+ +E+KE    + +A+TP   +LI   +  NDPI  Q  P   EL+I+ E+  DP+ ++
Sbjct: 52  EKYEELKETLEKFPLAITPYYLSLIETEDYENDPIFMQSFPSVHELDIIEEDLADPLDED 111

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQE 140
             SP++GI HRYPDR+L  + + C +YCR C R+  VG  +   +  KD     + YI  
Sbjct: 112 RDSPVEGITHRYPDRVLFLVSNKCAMYCRHCTRKRKVGDVE--YIPDKDQISKGIDYINN 169

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
             Q+ +V+ +GGDPL+L    L+ +L  L  I HV+I+R  SR+P+V P RI+  L++ L
Sbjct: 170 NPQVRDVLLSGGDPLLLDDSYLEWILSELTEIPHVEIVRIGSRLPVVLPYRIDSNLVEML 229

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
           ++   P++     NHP E +  +  A+ +LA+ GI L +QSVLL G+ND P I+  LM  
Sbjct: 230 RQY-HPIWFNTQFNHPREITSSSTEALRKLADGGIPLGNQSVLLSGVNDCPRIMKTLMHK 288

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
            V  R++PYY++  DL+ G SHFR  + +G +I+ SL+   SG   P Y++D PGG GK+
Sbjct: 289 LVMNRVRPYYMYQCDLSEGLSHFRTPVGKGIEIIESLRGHTSGFAVPTYVIDAPGGGGKI 348


>gi|237743425|ref|ZP_04573906.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1]
 gi|260494967|ref|ZP_05815096.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33]
 gi|229433204|gb|EEO43416.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1]
 gi|260197410|gb|EEW94928.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33]
          Length = 425

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 117/310 (37%), Positives = 187/310 (60%), Gaps = 2/310 (0%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
           DL     +  E+ + +KE      +A+TP   +LI+  +   PI +Q IP  +E++    
Sbjct: 35  DLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQAIPTIQEIHQSDA 94

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS    +   +  +
Sbjct: 95  DLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-ID 153

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
            A+ YI +  Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R  SR P+V PQRI
Sbjct: 154 KAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRIGSRTPVVLPQRI 213

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
            PEL   LK+   P+++  H NHP E + EA  A   LA+AGI L +Q+VLL+G+ND   
Sbjct: 214 TPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQTVLLRGVNDSVP 272

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   P +++D
Sbjct: 273 VMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVD 332

Query: 313 LPGGYGKVKI 322
            PGG GK  +
Sbjct: 333 APGGGGKTPV 342


>gi|291286787|ref|YP_003503603.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290883947|gb|ADD67647.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 438

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 120/351 (34%), Positives = 208/351 (59%), Gaps = 8/351 (2%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q RH  KT+   +D+ N +   +E+  E+K     + +A+TP  A+LI+  N  +DP+ 
Sbjct: 29  WQFRHTIKTVEDFEDVLNISFSPEEK-KEMKITLRKFPMAITPYYASLIDIENYKDDPVF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q     EEL++   E  DP+ +++ SP++ + HRYPDR+L  + ++C +YCR C R+  
Sbjct: 88  KQSCCSTEELHVESYEMGDPLAEDSDSPVENLTHRYPDRVLFHVSNMCAMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTE-AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
           VG Q    + +KD+    L YI+E  ++ +V+ +GGDP +LS   ++ +L  +  I+HV+
Sbjct: 148 VGDQDH--IPAKDSLIKGLEYIREHEEVRDVLLSGGDPFMLSDSAIEWLLDEISSIEHVE 205

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           ++R  +R+P+V P RI  +LI  L +    ++I  H NHP E ++ +  A+ +L  AGI 
Sbjct: 206 VIRIGTRMPVVLPYRITEDLIDILSKYDN-LWINTHFNHPRELTDSSRQALKKLVKAGIP 264

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           + +Q+VLL G+ND P I+ +LM   V+ R++PYY++  DL+ G SHFR  + +G +I+ S
Sbjct: 265 MGNQTVLLAGVNDCPYIMKSLMHKLVKNRVRPYYIYQCDLSEGLSHFRTPVSKGIEIIES 324

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           L+   SG   P Y++D PGG GK+ +  + +         + ++  ++  Y
Sbjct: 325 LRGHTSGFAVPTYVIDAPGGGGKIPVTPNYVVSYATNKVILRNYEGVICTY 375


>gi|118580185|ref|YP_901435.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus
           DSM 2379]
 gi|118502895|gb|ABK99377.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379]
          Length = 346

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 123/316 (38%), Positives = 187/316 (59%), Gaps = 6/316 (1%)

Query: 18  NLIKKEQID-EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED 76
           N+ KK  I  E   ++  Y   ++P  A LI      D I +Q IP   EL+    +  D
Sbjct: 13  NITKKSTIAAEFTSVAASYPFRVSPSYAKLIR--REGDAIWKQCIPDLRELDD-AGQCPD 69

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           P+ ++  SP+ G++HRYPDR++L + + CPVYCRFC R+  VG +    + ++  + A+ 
Sbjct: 70  PLAEHLLSPVPGLIHRYPDRVVLLVSNRCPVYCRFCMRKRHVG-EGDAPMDAQTLKQAMD 128

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
           YI     I ++I +GGDPL+L    L  +L+ LR I HV I+R  +RVP+  P+R+ PEL
Sbjct: 129 YIAANPAIRDIILSGGDPLMLDDDSLHHILQQLRAIPHVTIIRIGTRVPVTLPERVTPEL 188

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
              LK    P+YI  H NHP E +  +  A   LA+AGI L +Q+VLL+G+ND  + + +
Sbjct: 189 CTLLKRF-HPLYINTHFNHPDEITPLSARACDLLADAGIPLGNQTVLLRGVNDSLDTMRS 247

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L    + LR++PYY+H  DL  GT+HFR  I  G +I+  L+  +SG+  P Y++DLP G
Sbjct: 248 LQTGLLSLRVRPYYIHQMDLVRGTAHFRTPIATGLEIIRGLRGHVSGMAVPQYVIDLPDG 307

Query: 317 YGKVKIDTHNIKKVGN 332
            GKV I   ++++ G+
Sbjct: 308 KGKVPILPDDVERQGD 323


>gi|253582165|ref|ZP_04859388.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium
           ATCC 27725]
 gi|251835704|gb|EES64242.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium
           ATCC 27725]
          Length = 382

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 112/303 (36%), Positives = 188/303 (62%), Gaps = 2/303 (0%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           +  E+ + +K+      +A+TP   +L++ ++PN P+ +Q IP  +E++    +  DP+ 
Sbjct: 9   LSAEEEEGVKKTLETLRMAITPYYFSLMDINDPNCPVRKQAIPSIKEIHKAEADLLDPLH 68

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   G+    +   +  + A+ YI 
Sbjct: 69  EDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGANDDAMPMDR-IDKAIEYIA 127

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
           +  Q+ +V+ +GGD L++S + L+ ++  LR I HV+I+R  SR P+V PQRI PEL++ 
Sbjct: 128 KTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRIGSRTPVVLPQRITPELVEM 187

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           LK+   P+++  H NHP E + E+  A   +ANAGI L +QSVLL+GIND   ++  L+ 
Sbjct: 188 LKKY-HPIWLNTHFNHPKEVTPESKKACELMANAGIPLGNQSVLLRGINDCVHVMKRLVH 246

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   P +++D PGG GK
Sbjct: 247 DLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGK 306

Query: 320 VKI 322
             +
Sbjct: 307 TPV 309


>gi|19705171|ref|NP_602666.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328274|ref|ZP_06870803.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|19713110|gb|AAL93965.1| Lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154578|gb|EFG95366.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 425

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 116/315 (36%), Positives = 189/315 (60%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           L S +DL     + +E+ + +        +A+TP   +LI+ ++   PI +Q IP  +E+
Sbjct: 30  LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQAIPTIQEI 89

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS    +  
Sbjct: 90  HQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPM 149

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
            +  + A+ YI +  Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R  SR P+V
Sbjct: 150 DR-IDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRIGSRTPVV 208

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI PEL   LK+   P+++  H NHP E + EA  A   LA+AG+ L +Q+VLL+GI
Sbjct: 209 LPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQTVLLRGI 267

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   P
Sbjct: 268 NDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVP 327

Query: 308 FYILDLPGGYGKVKI 322
            +++D PGG GK  +
Sbjct: 328 TFVVDAPGGGGKTPV 342


>gi|256026982|ref|ZP_05440816.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
 gi|289764966|ref|ZP_06524344.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
 gi|289716521|gb|EFD80533.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
          Length = 425

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 117/310 (37%), Positives = 186/310 (60%), Gaps = 2/310 (0%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
           DL     +  E+ + +KE      +A+TP   +LI+  +   PI +Q IP  +E+     
Sbjct: 35  DLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQAIPTIQEIYQSDA 94

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS    +   +  +
Sbjct: 95  DLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-ID 153

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
            A+ YI +  Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R  SR P+V PQRI
Sbjct: 154 KAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRIGSRTPVVLPQRI 213

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
            PEL   LK+   P+++  H NHP E + EA  A   LA+AGI L +Q+VLL+G+ND   
Sbjct: 214 TPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQTVLLRGVNDSVP 272

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   P +++D
Sbjct: 273 VMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVD 332

Query: 313 LPGGYGKVKI 322
            PGG GK  +
Sbjct: 333 APGGGGKTPV 342


>gi|126652300|ref|ZP_01724476.1| KamA [Bacillus sp. B14905]
 gi|126590875|gb|EAZ84988.1| KamA [Bacillus sp. B14905]
          Length = 462

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 197/342 (57%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     + +E+ + +K       + +TP  A+L+NP +   PI  Q +P   E
Sbjct: 37  TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQSVPLSAE 96

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +     + EDP+ ++  SP+ GI HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 97  IMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QVGMAV 155

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+ YI+   +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R  +R P+
Sbjct: 156 PKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRIGTRAPV 215

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI  EL   LK+   PV++  H N   E ++EA  A  +L NAG+ + +QSV+L G
Sbjct: 216 VFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQSVILTG 274

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  L+   V++R++PYY++  DL+ G SHFR  I +G +I+ SL+   SG   
Sbjct: 275 INDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGHTSGYAV 334

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D P G GK+ +  + I         + ++  ++  YP
Sbjct: 335 PTFVVDAPNGGGKIALQPNYILSQSPEKVVLRNYEGVISSYP 376


>gi|169828773|ref|YP_001698931.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41]
 gi|168993261|gb|ACA40801.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41]
          Length = 462

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 197/342 (57%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     + +E+ + +K       + +TP  A+L+NP +   PI  Q +P   E
Sbjct: 37  TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQSVPLSAE 96

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +     + EDP+ ++  SP+ GI HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 97  IMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QVGMAV 155

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+ YI+   +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R  +R P+
Sbjct: 156 PKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRIGTRAPV 215

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI  EL   LK+   PV++  H N   E ++EA  A  +L NAG+ + +QSV+L G
Sbjct: 216 VFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQSVILTG 274

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  L+   V++R++PYY++  DL+ G SHFR  I +G +I+ SL+   SG   
Sbjct: 275 INDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGHTSGYAV 334

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D P G GK+ +  + I         + ++  ++  YP
Sbjct: 335 PTFVVDAPNGGGKIALQPNYIISQSPEKVVLRNYEGVISSYP 376


>gi|205373143|ref|ZP_03225947.1| lysine 2,3-aminomutase [Bacillus coahuilensis m4-4]
          Length = 468

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 201/342 (58%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + +K  +    + +TP  A L+N ++P  PI  Q +P  +E
Sbjct: 36  TIRTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNKNDPRCPIRMQSVPLGQE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  IHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+ YI++   I +V+ +GGD L+++ + L+ ++K+LR I H++I+R  +R P+
Sbjct: 155 PKKQIDRAIQYIKDNDGIRDVLLSGGDALLINDQVLEYIIKSLREIPHIEIIRLGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI  +L+  LK+   PV++  H N   E ++EA  A  +L NAG+ + +Q+V+L G
Sbjct: 215 VFPQRITDKLVGILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  I +G +I+  L+   SG   
Sbjct: 274 INDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D PGG GK+ +  + +   G+    + +   ++  YP
Sbjct: 334 PAFVVDAPGGGGKITLQPNYLLAQGSKHVVLRNFEGVITTYP 375


>gi|89097814|ref|ZP_01170701.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911]
 gi|89087316|gb|EAR66430.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911]
          Length = 495

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 117/342 (34%), Positives = 199/342 (58%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ + +DL     +  E+ + +K  +    + +TP  A+L+NP +P  P+  Q +P  +E
Sbjct: 60  TIRNLEDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQSVPISQE 119

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 120 IHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 178

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+AYI+   ++ +V+ +GGD L+++ K L+ +LK LR I HV+I+R  +R P+
Sbjct: 179 PKKQLDDAIAYIRNTPEVRDVLISGGDGLLINDKILEYILKNLREIDHVEIIRIGTRAPV 238

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   LK+   P+++  H N   E +EEA  A   LA+AG+ + +Q+V+L G
Sbjct: 239 VFPQRITENLCNILKKY-HPIWLNTHFNTSIEITEEAKKACEMLADAGVPVGNQAVILAG 297

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 298 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 357

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 358 PTFVVDAPGGGGKIALQPNYLISQSAEKTVLRNFEGVITTYP 399


>gi|319651187|ref|ZP_08005318.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2]
 gi|317397116|gb|EFV77823.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2]
          Length = 476

 Score =  229 bits (585), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 117/342 (34%), Positives = 197/342 (57%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  ++ + ++  +    + +TP  A+L+NP +P  PI  Q +P  +E
Sbjct: 36  TIRTVDDLKKVINLTPDEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISKE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  IYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  +AA++YI+   Q+ +V+ +GGD L+++   L+ +LK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDAAISYIRSAPQVRDVLISGGDGLLINDNILEYILKNLREIDHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   LK+   PV++  H N   E +E++  A   LANAG+ + +QSV+L G
Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEDSKRACEMLANAGVPVGNQSVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 334 PTFVVDAPGGGGKISLQPNYLISQSADKVVLRNFEGVITTYP 375


>gi|220916509|ref|YP_002491813.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954363|gb|ACL64747.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 402

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 119/332 (35%), Positives = 178/332 (53%), Gaps = 2/332 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH  LT+A D      +   +       + H  +A TP  A+L++  +P  PI  Q 
Sbjct: 20  WQQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQV 78

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E    P + +DPIG+  H P++ IVH+YPDR L   +  C VYCR C RR +  S
Sbjct: 79  MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                      E  +A+++   ++ +VI +GGDPL LS ++L  +L  LR I HVQ+LR 
Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+ +P R+  + +        P+++  H NHP E + EA  A  RL + G+ + +Q
Sbjct: 199 ATRAPVTNPMRVT-DALAAALRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+N    IL +L    +  R++PYYLH  DLAAGT H R  +  G  I+ +++ +
Sbjct: 258 SVLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGR 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
            SGL  P   +DLPGG GKV +    +   G 
Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGE 349


>gi|295706131|ref|YP_003599206.1| KamA family protein [Bacillus megaterium DSM 319]
 gi|294803790|gb|ADF40856.1| KamA family protein [Bacillus megaterium DSM 319]
          Length = 470

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 197/346 (56%), Gaps = 2/346 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + ++  +    + +TP  A+L+NP +P  P+  Q +P  +E
Sbjct: 36  TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQSVPVGKE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  +AA+AYI +  ++ +V+ +GGD L+++   L+ +LK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   L++   PV++  H N   E +EE   A   L +AG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P +++D PGG GK+ +  + I         + +   ++  YP   S
Sbjct: 334 PTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379


>gi|294500786|ref|YP_003564486.1| KamA family protein [Bacillus megaterium QM B1551]
 gi|294350723|gb|ADE71052.1| KamA family protein [Bacillus megaterium QM B1551]
          Length = 470

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 117/346 (33%), Positives = 197/346 (56%), Gaps = 2/346 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + ++  +    + +TP  A+L+NP +P  P+  Q +P  +E
Sbjct: 36  TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQSVPVGKE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  +AA+AYI +  ++ +V+ +GGD L+++   L+ +LK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   L++   PV++  H N   E +EE   A   L +AG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P +++D PGG GK+ +  + I         + +   ++  YP   S
Sbjct: 334 PTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379


>gi|289548297|ref|YP_003473285.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM
           14484]
 gi|289181914|gb|ADC89158.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM
           14484]
          Length = 367

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 120/313 (38%), Positives = 192/313 (61%), Gaps = 6/313 (1%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN--ILPEEREDPIGD 80
           E+ + I+     Y +A+TP   +LI+PH+P DPI  Q IP+  E +  +     ED + +
Sbjct: 39  EEEEGIRRTQGLYPMAITPYYLSLIDPHDPQDPIRLQAIPRAIETDPYVQSYGEEDALRE 98

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
               P   + HRYPDR+L+++   C VYCR C R+ +  SQ    ++ ++ +  + YI+ 
Sbjct: 99  EGQIP--HMTHRYPDRVLVRVTTFCAVYCRHCMRKRIF-SQGERSITKEEIDTIIQYIEA 155

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
              + +V+ +GGDPL LS+++L+ +L  LR I HV+I+R  +R+P++ PQR   E +  L
Sbjct: 156 HPSVRDVLLSGGDPLSLSYEKLEYILSRLRRIPHVEIIRIGTRLPVLAPQRFFDEKLLKL 215

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
            E   P++I  H NHP E +  A  A+  L   GI + +Q+VLLKG+NDDP+++  LMR+
Sbjct: 216 LERYSPIWINTHFNHPKEITPYAAEAVENLLRHGIPVNNQTVLLKGVNDDPQVMLELMRS 275

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
            + +++KP YL H D   G  HFR ++E+G +I+  L+ KISG+  P Y +DLPGG GKV
Sbjct: 276 LLRIKVKPQYLFHCDPIKGAIHFRTSLEKGLEIMDFLRGKISGMGIPTYAVDLPGGKGKV 335

Query: 321 K-IDTHNIKKVGN 332
             + ++ ++K GN
Sbjct: 336 PLLPSYLVRKEGN 348


>gi|257451624|ref|ZP_05616923.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
 gi|257466940|ref|ZP_05631251.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918082|ref|ZP_07914322.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317058188|ref|ZP_07922673.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
 gi|313683864|gb|EFS20699.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
 gi|313691957|gb|EFS28792.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 419

 Score =  229 bits (584), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 119/321 (37%), Positives = 190/321 (59%), Gaps = 3/321 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q+R++  T       ANL  +E    +K +     +A+TP   +LI+  +PN P+ +Q I
Sbjct: 25  QVRNRIETLDDLKQFANLSDEESEGVVKTLET-LRMAITPYYFSLIDLDDPNCPVRKQAI 83

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  +E++    +  DP+ ++  SP  G+ HRYPDR+LL +  +C +YCR C RR   G Q
Sbjct: 84  PTIQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAG-Q 142

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
               +  +  +  + YI +  ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R  
Sbjct: 143 SDDSMPMERIDRCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRIG 202

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LANAG+ L +QS
Sbjct: 203 SRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKKACEMLANAGVPLGNQS 261

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+ND   ++  LM   V +R++PYY++  DL+ G  HFR  + +G +I+  L+   
Sbjct: 262 VLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
           SG   P +++D PGG GK  +
Sbjct: 322 SGYAVPTFVVDAPGGGGKTPV 342


>gi|257463416|ref|ZP_05627811.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
 gi|317060981|ref|ZP_07925466.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
 gi|313686657|gb|EFS23492.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
          Length = 419

 Score =  229 bits (583), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 119/322 (36%), Positives = 195/322 (60%), Gaps = 5/322 (1%)

Query: 2   QLRHKTLTSAQDLYN-ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           Q+R++ + + +DL   ANL ++E    +K +     +A+TP   +LI+  +PN P+ +Q 
Sbjct: 25  QVRNR-IETLEDLKQFANLSEEESEGVVKTLET-LRMAITPYYFSLIDLEDPNCPVRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E++    +  DP+ ++  SP  G+ HRYPDR+LL +  +C +YCR C RR   G 
Sbjct: 83  IPTVQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAG- 141

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q    +  +  +  + YI +  ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R 
Sbjct: 142 QSDDSMPMERIDKCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LA+AG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKRACEMLADAGVPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND   ++  LM   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 SVLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
            SG   P +++D PGG GK  +
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPV 342


>gi|294783510|ref|ZP_06748834.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA]
 gi|294480388|gb|EFG28165.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA]
          Length = 425

 Score =  229 bits (583), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 112/286 (39%), Positives = 178/286 (62%), Gaps = 2/286 (0%)

Query: 37  IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           +A+TP   +LI+ ++   P+ +Q IP  +E++    +  DP+ ++  SP+ G+ HRYPDR
Sbjct: 59  MAITPYYFSLIDMNSDRCPVRKQAIPTIQEIHQADADLLDPLHEDEDSPVPGLTHRYPDR 118

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +LL +  +C +YCR C RR   GS    +   +  + A+ YI +  Q+ +V+ +GGD L+
Sbjct: 119 VLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-IDKAIEYIAKTPQVRDVLLSGGDALL 177

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           +S K+L+ ++K LR I HV+I+R  SR P+V PQRI PEL   LK+   P+++  H NHP
Sbjct: 178 VSDKKLESIIKKLREIPHVEIIRIGSRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHP 236

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E + EA  A   LANAG+ L +Q+VLL+GIND   ++  L+   V +R++PYY++  DL
Sbjct: 237 QEVTPEAKKACEMLANAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDL 296

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           + G  HFR  + +G +I+  L+   SG   P +++D PGG GK  +
Sbjct: 297 SMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPV 342


>gi|78223047|ref|YP_384794.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15]
 gi|78194302|gb|ABB32069.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15]
          Length = 344

 Score =  229 bits (583), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 114/317 (35%), Positives = 186/317 (58%), Gaps = 7/317 (2%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           +   Y + +T     LI    P D I RQ +P   EL+   ++  DP+ +   SP+ G++
Sbjct: 32  LVRRYPLRITRRYLGLIG--KPGDAIWRQCVPDPCELD--DDQLSDPLDEERLSPVPGVI 87

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           HRYPDR++  + + C VYCRFC R+  VG       + +  + A+ YI     I +VI +
Sbjct: 88  HRYPDRVVWLVSNECAVYCRFCMRKRRVGCPLAGS-NGRSGDDAVRYIAATPAIRDVILS 146

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+L  +RL+ +L  LR I HV+++R  +R P+  P+RI   L + LK    P+Y+ 
Sbjct: 147 GGDPLLLDDERLEAILARLRAIPHVEMIRIGTRTPVTLPERITARLCRMLKRY-HPLYVN 205

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
            H NHP E + EA  A +RLA+ GI L +Q+VLL G+ND+P I+  LM+  + +R++PYY
Sbjct: 206 THFNHPREITPEATKACARLADTGIPLGNQTVLLAGVNDEPAIMTLLMQRLLAIRVRPYY 265

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
           +H  DL  GT HFR  +  G  I+ +L+   SG+  P++++D  GG GK+ +    +++ 
Sbjct: 266 IHQMDLVRGTGHFRTKVTTGLDIIGALRGHTSGMATPYFVIDAAGGKGKIPLLPDAVERR 325

Query: 331 GNGSYCITDHHNIVHDY 347
           G+ ++ + ++   + +Y
Sbjct: 326 GD-TWLLRNYRGEIVEY 341


>gi|282164589|ref|YP_003356974.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE]
 gi|282156903|dbj|BAI61991.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE]
          Length = 435

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 122/330 (36%), Positives = 196/330 (59%), Gaps = 16/330 (4%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+RH  + + S ++L   +   +E+  E+++   H+ + +TP   +LI+  +  NDP+ 
Sbjct: 29  WQMRHAVRDIPSFEELTGVHF-NREERRELEKTIEHFPLNITPYYLSLIDTADMKNDPVY 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q  P  EELN+   +  DP+ +   SP+ GI HRYPDR+L  + +VC +YCR C R+  
Sbjct: 88  KQCFPSPEELNVEKCDMVDPLAEEEDSPVPGITHRYPDRVLFLVSNVCAMYCRHCTRKRK 147

Query: 118 VGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           VG+      + T+L   D      YI++   I +V+ +GGDPL+L    L  +L  L  I
Sbjct: 148 VGNVDYIPDRETILKGID------YIRDNPSIRDVLLSGGDPLMLPDDYLDWILSELDNI 201

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            HV+++R  +RVP+V P RI  +L++ LK    P++I  H NHP E +  +  A+ +LA+
Sbjct: 202 PHVEVVRIGTRVPVVLPCRITDDLVEMLK-GHHPLWINTHFNHPKEVTPASREALRKLAD 260

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AGI L +Q VLL G+ND P+I+  L +  V+ R++PYY+   DL+ G SHFR ++ +G +
Sbjct: 261 AGIPLGNQCVLLAGVNDCPQIMKKLFQKLVQNRVRPYYMFQCDLSEGLSHFRTSVSKGIE 320

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           I+ +L    SG   P Y++D PGG GK+ +
Sbjct: 321 IIENLVGHTSGFAVPTYVVDAPGGGGKIPV 350


>gi|197121712|ref|YP_002133663.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
 gi|196171561|gb|ACG72534.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
          Length = 402

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 119/332 (35%), Positives = 177/332 (53%), Gaps = 2/332 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH  LT+A D      +   +       + H  +A TP  A+L++  +P  PI  Q 
Sbjct: 20  WQQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQV 78

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E    P + +DPIG+  H P++ IVH+YPDR L   +  C VYCR C RR +  S
Sbjct: 79  MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                      E  +A+++   ++ +VI +GGDPL LS ++L  +L  LR I HVQ+LR 
Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+ +P R+  + +        P+++  H NHP E + EA  A  RL + G+ + +Q
Sbjct: 199 ATRAPVTNPMRVT-DALAAALRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+N    IL +L    +  R++PYYLH  DLAAGT H R  +  G  I+ +++  
Sbjct: 258 SVLLRGVNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGH 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
            SGL  P   +DLPGG GKV +    +   G 
Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGE 349


>gi|86158969|ref|YP_465754.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775480|gb|ABC82317.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 402

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 119/332 (35%), Positives = 177/332 (53%), Gaps = 2/332 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH  L +A D      +   +       + H  +A TP  A+LI+  +P  P+  Q 
Sbjct: 20  WQQRH-ALATAADFERLFPLTPAERRGFALAAGHTRVAATPYYASLIDRDHPGCPVRLQV 78

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E    P + +DPIG+  H P++ IVH+YPDR L   +  C VYCR C RR +  S
Sbjct: 79  MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                      E  +A+++   ++ +VI +GGDPL LS ++L  +L  LR I HVQ+LR 
Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+ +P R+  E +        P+++  H NHP E + EA  A  RL + G+ + +Q
Sbjct: 199 ATRAPVTNPMRVT-EALAAALRRHAPLFVITHFNHPKECTPEAREACERLVDHGVPVENQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+N    IL +L    +  R++PYYLH  DLAAGT H R  +  G  I+ +++ +
Sbjct: 258 SVLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGR 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
            SGL  P   +DLPGG GKV +    +   G 
Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGE 349


>gi|150400676|ref|YP_001324442.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus
           Nankai-3]
 gi|150013379|gb|ABR55830.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus
           Nankai-3]
          Length = 437

 Score =  228 bits (582), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 121/322 (37%), Positives = 188/322 (58%), Gaps = 3/322 (0%)

Query: 27  EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
           E++E ++ + +++TP  A+LI+  N   DPI +Q     EEL     E  DP+ ++  SP
Sbjct: 57  ELQEAADVFPLSITPYYASLIDVKNFREDPIFKQSFVGVEELITENFEMADPLAEDKDSP 116

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           + G+ HRYPDRIL  + H C VYCR C R+  VG    ++ S K  E  L YI+   QI 
Sbjct: 117 VPGLTHRYPDRILFYISHACAVYCRHCTRKRKVGDTD-SIPSKKQIEKGLDYIRNNPQIR 175

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +V+ +GGDPL+L    L  +L  L  I H++++R  +RVP+V P RI  EL+  LK+   
Sbjct: 176 DVLLSGGDPLLLPDDYLDWILTELWSIPHIEVIRIGTRVPVVLPYRITDELVNMLKKH-H 234

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           P++I  H NH  E ++ +  A+ +LA+ GI L +QSVLL+G+ND P ++  L +     R
Sbjct: 235 PLWINTHFNHIKEITKSSKNALRKLADVGIPLGNQSVLLRGVNDCPNVIKKLNQKLAANR 294

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           ++PYYL   DL+ G SHFR ++ +G +I+ SL    SG   P Y++D PGG GK+ +  +
Sbjct: 295 VRPYYLFQCDLSEGLSHFRTSVRKGVEIIESLIGHTSGFAVPRYVVDAPGGGGKIPVMPN 354

Query: 326 NIKKVGNGSYCITDHHNIVHDY 347
            +   G     + ++  ++  Y
Sbjct: 355 YVISWGTDRVILRNYEGVITTY 376


>gi|262066228|ref|ZP_06025840.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693]
 gi|291380084|gb|EFE87602.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693]
          Length = 425

 Score =  228 bits (582), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 113/311 (36%), Positives = 185/311 (59%), Gaps = 2/311 (0%)

Query: 37  IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           +A+TP   +LI+ ++   P+ +Q IP  +E++    +  DP+ ++  SP+ G+ HRYPDR
Sbjct: 59  MAITPYYFSLIDMNSDRCPVRKQAIPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDR 118

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +LL +  +C +YCR C RR   GS    +   +  + A+ YI +  Q+ +V+ +GGD L+
Sbjct: 119 VLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-IDRAIEYIAKTPQVRDVLLSGGDALL 177

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           +S K+L+ ++K LR I HV+I+R  +R P+V PQRI PEL   LK+   P+++  H NHP
Sbjct: 178 VSDKKLESIIKKLREIPHVEIIRIGTRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHP 236

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E + EA  A   LANAG+ L +Q+VLL+GIND   ++  L+   V +R++PYY++  DL
Sbjct: 237 QEVTPEAKKACEMLANAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDL 296

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
           + G  HFR  + +G +I+  L+   SG   P +++D PGG GK  +    +     G   
Sbjct: 297 SMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVV 356

Query: 337 ITDHHNIVHDY 347
           + +   ++  Y
Sbjct: 357 LRNFEGVITTY 367


>gi|302872649|ref|YP_003841285.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575508|gb|ADL43299.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 406

 Score =  228 bits (581), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 123/315 (39%), Positives = 200/315 (63%), Gaps = 4/315 (1%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TSA+ L     + +++  +I+E++  Y  A++P   +LI+P +P+ PI +Q +P   EL
Sbjct: 69  ITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPSCPIKKQSVPSSLEL 128

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
             + +   DP+ + + SP K +  RYPDR+++K+ ++C ++CRFC RR ++G +  T  S
Sbjct: 129 --IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG-ETDTHAS 185

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+R  +R P+ 
Sbjct: 186 LDDITDAIEYVAKNPHIRDVLITGGDALLLSDEILEWILRSLRQIPHVEIIRIGTRAPVT 245

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI  EL+  LK+   P+YI  H NHP E ++E+  A   L++AG+ L +Q VLL G+
Sbjct: 246 LPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLSDAGVPLGNQMVLLNGV 304

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           N+D  I+  L +  +++R+KPYY+ HP    GTSHF + IEEG +I+ SL+ + SG+  P
Sbjct: 305 NNDKYIVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVAIEEGIEIIESLRGRTSGMAVP 364

Query: 308 FYILDLPGGYGKVKI 322
            YI++ P G GK  I
Sbjct: 365 TYIVNAPKGKGKTPI 379


>gi|89896773|ref|YP_520260.1| hypothetical protein DSY4027 [Desulfitobacterium hafniense Y51]
 gi|219667394|ref|YP_002457829.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium
           hafniense DCB-2]
 gi|89336221|dbj|BAE85816.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219537654|gb|ACL19393.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium
           hafniense DCB-2]
          Length = 413

 Score =  228 bits (581), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 136/349 (38%), Positives = 199/349 (57%), Gaps = 6/349 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +  A++L     +  +Q  EI E+   Y  A++P   +LI+  +P DPI  Q 
Sbjct: 68  WQLKNR-IQDAENLSTLLPLTPKQRHEINEVGKAYRWAVSPYYLSLIDKDDPQDPIRLQS 126

Query: 61  IPQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
           +P  EE  IL +  E DP+G+   SP   I  RYPDR+++ + ++C +YCR C RR  +G
Sbjct: 127 LPSVEE--ILDDSGEADPMGEEYTSPAPCITRRYPDRLIINVTNLCAMYCRHCQRRRNIG 184

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            +     +  + EAAL YI+   +I +V+ TGGD L+LS + L  +L  L  IKHV+I R
Sbjct: 185 -EIDLHETRANLEAALDYIRSNPEIRDVLVTGGDALLLSDQMLDWLLGELHEIKHVEIKR 243

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             +RVP+  P RI  EL   L E   P+YI    NHP E +EE   A  RL  AG+IL +
Sbjct: 244 IGTRVPVTLPMRITDELCAIL-EKYPPLYINTQFNHPQEVTEETKKAADRLIKAGVILGN 302

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLKGIND PEI+  L +  +++R++PYY+ H     GTSHF   I++G +I+ +L+ 
Sbjct: 303 QAVLLKGINDQPEIMKRLNQELLKIRVRPYYIFHAKNVKGTSHFIPRIQDGLRIMENLRG 362

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
             SGL  P YI++ PGG GK  I    +  + +    I      V  YP
Sbjct: 363 YTSGLAIPTYIINAPGGGGKTPILPQYLISLNDEEAVIRTWEGKVVHYP 411


>gi|317152560|ref|YP_004120608.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316942811|gb|ADU61862.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 437

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 118/314 (37%), Positives = 186/314 (59%), Gaps = 3/314 (0%)

Query: 35  YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
           + +A+TP   +LI+  +  NDP+  Q  P  EEL I   +  DP+ ++  SP+ GI HRY
Sbjct: 64  FPMAVTPYYLSLIDVDDYANDPVFLQSFPSPEELKIGRYDMTDPLHEDEDSPVPGITHRY 123

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           PDR+L  + + C +YCR C R+  VG    ++ S  + E  L YI+   Q+ +V+ +GGD
Sbjct: 124 PDRVLFHVSNTCAMYCRHCTRKRKVGDVD-SIPSRDNLERGLEYIRNTPQVRDVLLSGGD 182

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+LS ++L  +L  +R I HV+++R  +R P+V P RI  EL+  L +   P+++  H 
Sbjct: 183 PLMLSDEKLDWLLTEIRAIDHVEVVRIGTRTPVVLPYRITDELVSMLAKH-HPLWLNTHF 241

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E +  +  AI RLA+AGI L +QSVLL G+ND   ++  L    ++ RI+PYYL+ 
Sbjct: 242 NHPRELTASSRRAIQRLADAGIPLGNQSVLLAGVNDCQRLIRTLNLKLIKNRIRPYYLYQ 301

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
            DL+ G +HFR  I +G +I+ SL+   SG   P Y++D PGG GK+ +  + +   G  
Sbjct: 302 CDLSEGLTHFRTPIGKGIEIIESLRGHTSGFSVPTYVVDAPGGGGKIPVMPNYVVSWGPN 361

Query: 334 SYCITDHHNIVHDY 347
              + ++  ++  Y
Sbjct: 362 KVVLRNYEGVITTY 375


>gi|294499134|ref|YP_003562834.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551]
 gi|294349071|gb|ADE69400.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551]
          Length = 469

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 121/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ + +DL     +  ++ + +K  +    + +TP  A L++ ++P  PI  Q +P  EE
Sbjct: 36  TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDENDPKCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+ YI    QI +V+ +GGD L+++   L+ +LK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   LK+   PV++  H N   E +EE+  A   LANAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLANAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  I +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +I+D PGG GK+ +  + I    +    + +   ++  YP
Sbjct: 334 PTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYP 375


>gi|20092773|ref|NP_618848.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A]
 gi|19918069|gb|AAM07328.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A]
          Length = 419

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 126/352 (35%), Positives = 203/352 (57%), Gaps = 9/352 (2%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q R++ +T+ ++L     +   +  +IK+    +S+A++P  A+LI+P +P  PI  Q 
Sbjct: 21  WQYRNR-ITTVEELEKLIPLSDPEKADIKKALEVFSMAISPYYASLIDPEDPKCPIRMQA 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           +P   EL     E EDP+ ++  SP K   I HRYPDR+L  + + C +YCR C R+  V
Sbjct: 80  VPLSAELQKSSWELEDPLCEDLDSPSKESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 139

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G+++    S K     + YI+E  ++ +V+ +GGD L++S +RL  +L  L  I HV+I+
Sbjct: 140 GNREYD-YSEKTIREGIEYIREHPEVRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIV 198

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           R  +R P+  PQRI PEL + L   GK   V++  H NHP E + EA  A+  LA AGI 
Sbjct: 199 RIGTRAPVTLPQRITPELCEIL---GKYPSVWLNTHFNHPKEITSEAKKAMGMLARAGIP 255

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           L +QSVLL+G+ND P I+  L    + ++ +PYYL+  DL+ G  HFR ++  G +I+  
Sbjct: 256 LGNQSVLLRGVNDCPMIIKKLCHELLRIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEM 315

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           L+   SGL  P +++D PGG GK+ +  + +    +    + ++  ++  YP
Sbjct: 316 LRGHTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICMYP 367


>gi|254303334|ref|ZP_04970692.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323526|gb|EDK88776.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 425

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 111/286 (38%), Positives = 178/286 (62%), Gaps = 2/286 (0%)

Query: 37  IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           +A+TP   +LI+ ++   PI +Q IP  +E++    +  DP+ ++  SP+ G+ HRYPDR
Sbjct: 59  MAITPYYFSLIDMNSDRCPIRKQAIPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDR 118

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +LL +  +C +YCR C RR   GS    +   +  + A+ YI +  Q+ +V+ +GGD L+
Sbjct: 119 VLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-IDKAIEYIAKTPQVRDVLLSGGDALL 177

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           +S K+L+ +++ LR I HV+I+R  SR P+V PQRI PEL   LK+   P+++  H NHP
Sbjct: 178 VSDKKLESIIQKLRAIPHVEIIRIGSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHP 236

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E + EA  A   LA+AG+ L +Q+VLL+GIND   ++  L+   V +R++PYY++  DL
Sbjct: 237 QEVTPEAKKACEMLADAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDL 296

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           + G  HFR  + +G +I+  L+   SG   P +++D PGG GK  +
Sbjct: 297 SMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPV 342


>gi|302340456|ref|YP_003805662.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
           DSM 11293]
 gi|301637641|gb|ADK83068.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
           DSM 11293]
          Length = 436

 Score =  226 bits (576), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 119/325 (36%), Positives = 194/325 (59%), Gaps = 6/325 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            QL+H  ++++S + L       K++  E++     + +++TP   +LI   +  NDPI 
Sbjct: 29  WQLKHSIRSISSFETLTGIQF-DKDKRQELEATVAQFPLSITPYYLSLIEKDDYQNDPIF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q      EL +   EREDP+ ++  SP++G+ HRYPDR+L  + ++C +YCR C R+  
Sbjct: 88  LQSFADPRELVVQKWEREDPLHEDKDSPVEGLTHRYPDRVLFHVSNICSMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    ++ +       + YI+    + +V+ +GGDPL+L    L  +L  LR I+HV+I
Sbjct: 148 VGDVD-SIPNKNQIRKGIDYIRNTPSVRDVLLSGGDPLMLDDDYLDWILTELRRIEHVEI 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR+P+V P R+  +L+  LK+   PV++  H NHP E +  +  A+++LA+AGI L
Sbjct: 207 VRIGSRMPVVLPYRVTDDLVLMLKKH-HPVWLNTHFNHPRELTHASRTALAKLADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P ++  L++  V  R++PYYL+  DL+ G +HFR  + +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCPRLMKTLVQKLVYSRVRPYYLYQCDLSEGLTHFRTPVGKGIEILESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
               SG   P Y++D PGG GK+ I
Sbjct: 326 IGHTSGFSVPTYVIDAPGGGGKIPI 350


>gi|237739441|ref|ZP_04569922.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31]
 gi|229423049|gb|EEO38096.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31]
          Length = 425

 Score =  226 bits (576), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 111/286 (38%), Positives = 178/286 (62%), Gaps = 2/286 (0%)

Query: 37  IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           +A+TP   +LI+ ++   PI +Q IP  +E++    +  DP+ ++  SP+ G+ HRYPDR
Sbjct: 59  MAITPYYFSLIDMNSDRCPIRKQAIPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDR 118

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +LL +  +C +YCR C RR   GS    +   +  + A+ YI +  Q+ +V+ +GGD L+
Sbjct: 119 VLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-IDRAIEYIAKTPQVRDVLLSGGDALL 177

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           +S K+L+ +++ LR I HV+I+R  SR P+V PQRI PEL   LK+   P+++  H NHP
Sbjct: 178 VSDKKLESIIQKLRAIPHVEIIRIGSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHP 236

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E + EA  A   LA+AG+ L +Q+VLL+GIND   ++  L+   V +R++PYY++  DL
Sbjct: 237 QEVTPEAKKACEMLADAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDL 296

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           + G  HFR  + +G +I+  L+   SG   P +++D PGG GK  +
Sbjct: 297 SMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPV 342


>gi|310822787|ref|YP_003955145.1| l-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
 gi|309395859|gb|ADO73318.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
          Length = 411

 Score =  226 bits (576), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 120/348 (34%), Positives = 189/348 (54%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH   + AQ      L  +E+   ++E +  + + ++P   +LI+P +P  P+  Q 
Sbjct: 47  WQQRHAVRSLAQLERYVPLTPQERAG-VQETAALFRVGISPYYLSLIDPEHPFCPVRMQS 105

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP +EE  I P E  DP+G++   P + IVH+YPDR+L   L  C VYCR C RR +   
Sbjct: 106 IPVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRRITKG 165

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +   LS       +AYI+   ++ +V+ +GGDP ILS  RL+++L  L  I HV+++R 
Sbjct: 166 GEAE-LSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRI 224

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  P R+   L   L+    PVY+  H NHP E + EA  A  RL + G+ + +Q
Sbjct: 225 GTRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQ 283

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VL++ +N D  I+  L    + +R++PYYLH  D+A G  H R  I +G +I+  ++  
Sbjct: 284 AVLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGH 343

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            +GL  P   +DLPGG GKV +    + + G       ++    + YP
Sbjct: 344 TTGLAVPHLAVDLPGGGGKVTLQPDYVVERGEHETVFRNYKGERYVYP 391


>gi|83814229|ref|YP_445259.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM
           13855]
 gi|83755623|gb|ABC43736.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM
           13855]
          Length = 401

 Score =  226 bits (576), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 112/301 (37%), Positives = 177/301 (58%), Gaps = 4/301 (1%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           IK   + +   +TP  A+L+ P +P+ P+ RQ +P  +E      +  DP+ +  H P+K
Sbjct: 47  IKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQAVPTMDEFGPDIVDELDPLDETGHEPVK 106

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
            ++H Y DR+   +   C +YCR+C R+ MVG  +   + + + +AA+ YI    +I +V
Sbjct: 107 NLIHNYEDRVAFCVTAECAIYCRYCLRKRMVGDAE-YFMRTDEHQAAIDYIAAHDEIRDV 165

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           + TGGDPL  +   L+ +L  LR I HV+++RF SR+P+  P RI  +L   L +   P+
Sbjct: 166 LLTGGDPLTFNEANLEWLLSRLRAIDHVELIRFGSRMPVKLPYRITDDLCDLLAQY-HPL 224

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           +I  H NHP E + +A AAI RL +AGI + +Q+VLL+G+NDDP+ +  L    V +R++
Sbjct: 225 WINTHFNHPKECTGDAAAAIGRLKDAGIPVGNQTVLLRGVNDDPDTMKALNEGLVRMRVR 284

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
           PYYL+   +  GT H R  IE G  I+  L+ + SG   P Y+LD P  +GKV ++   +
Sbjct: 285 PYYLYQAQIIGGTGHLRTPIEVGMHIMRQLRGRTSGFAIPDYVLDTP--HGKVPLNRSYV 342

Query: 328 K 328
           K
Sbjct: 343 K 343


>gi|295704462|ref|YP_003597537.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319]
 gi|294802121|gb|ADF39187.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319]
          Length = 469

 Score =  226 bits (575), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 120/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ + +DL     +  ++ + +K  +    + +TP  A L++ ++P  PI  Q +P  EE
Sbjct: 36  TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDVNDPKCPIRMQSVPISEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  LHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+ YI    QI +V+ +GGD L+++   L+ +LK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   LK+   PV++  H N   E +EE+  A   L+NAG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLSNAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  I +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +I+D PGG GK+ +  + I    +    + +   ++  YP
Sbjct: 334 PTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYP 375


>gi|332971462|gb|EGK10416.1| L-lysine 2,3-aminomutase [Desmospora sp. 8437]
          Length = 435

 Score =  226 bits (575), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 119/348 (34%), Positives = 197/348 (56%), Gaps = 3/348 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+    DL     +K+ ++  +        + +TP  A  ++  +P+ PI  Q 
Sbjct: 24  WQLTH-TIRKLDDLKQVINLKENEVGGVGISHQTIPLNITPYYALQMDTEDPSCPIRMQS 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 83  VPLSTELEQTKYDMEDPLLEDTDSPVPGLTHRYPDRVLFLITNQCSMYCRYCTRRRFSG- 141

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +A + YI+   Q+ +V+ +GGD L+++ + ++ +LK LR I HV+I+R 
Sbjct: 142 QIGMGVPKKQMDACIDYIRSNPQVRDVLLSGGDGLLVNDRIIEYLLKNLREIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  +L   LK+   PV++  H NHP E + EA  A   LA+AG+ L +Q
Sbjct: 202 GTRAPVVFPQRITEDLCNILKKY-HPVWLNTHFNHPKEITPEAKRACEMLADAGVPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND P I+  L    V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 AVILAGINDCPHIMKKLNHELVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEYLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG   P +++D PGG GK+ +  + +    +    + +   ++  YP
Sbjct: 321 TSGYAVPTFVVDAPGGGGKIPVAPNYVISQSSQKTVLRNFEGVITSYP 368


>gi|294507125|ref|YP_003571183.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8]
 gi|294343453|emb|CBH24231.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8]
          Length = 401

 Score =  226 bits (575), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 111/301 (36%), Positives = 177/301 (58%), Gaps = 4/301 (1%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           IK   + +   +TP  A+L+ P +P+ P+ RQ +P  +E      +  DP+ +  H P+K
Sbjct: 47  IKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQAVPTMDEFGPDIVDELDPLDETGHEPVK 106

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
            ++H Y DR+   +   C +YCR+C R+ MVG  +   + + + +AA+ YI    +I +V
Sbjct: 107 NLIHNYEDRVAFCVTAECAIYCRYCLRKRMVGDAE-YFMRTDEHQAAIDYIAAHDEIRDV 165

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           + TGGDPL  +   L+ +L  LR I HV+++RF SR+P+  P RI  +L   L +   P+
Sbjct: 166 LLTGGDPLTFNEANLEWLLSRLRAIDHVELIRFGSRMPVKLPYRITDDLCDLLAQY-HPL 224

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           +I  H NHP E +++A AAI RL +AGI + +Q+VLL+G+NDDP+ +  L    V +R++
Sbjct: 225 WINTHFNHPKECTDDAAAAIGRLKDAGIPVGNQTVLLRGVNDDPDTMKALNEGLVRMRVR 284

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
           PYYL+   +  GT H R  IE G   +  L+ + SG   P Y+LD P  +GKV ++   +
Sbjct: 285 PYYLYQAQIIGGTGHLRTPIEVGMHTMRQLRGRTSGFAIPDYVLDTP--HGKVPLNRSYV 342

Query: 328 K 328
           K
Sbjct: 343 K 343


>gi|73748139|ref|YP_307378.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
 gi|73659855|emb|CAI82462.1| L-lysine 2,3-aminomutase homologe, probable frameshift
           [Dehalococcoides sp. CBDB1]
          Length = 708

 Score =  225 bits (574), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 125/353 (35%), Positives = 200/353 (56%), Gaps = 11/353 (3%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
           + LT+ + L        E+   +++    + +++TP   +LI+  N  NDP+  Q +P  
Sbjct: 26  RDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVFIQSVPSA 84

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            ELN    ++EDP+ ++  SP  GI HRYPDR+L  + + C +YCR C R+  VG     
Sbjct: 85  AELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDIDKN 144

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            LS  + +  L YI+   ++ +V+ +GGDPL+L    L+ +L  L+ I HVQ++R  +RV
Sbjct: 145 -LSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQVIRIGTRV 203

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V PQRI P L++ +++   PV+I  H NHP E +  +  A+  LA+AGI L +Q+VLL
Sbjct: 204 PVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPLGNQTVLL 262

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
             +ND P ++  L+   VE R++PYYL+  D A G SHFR +I +G +I+ +L    SG 
Sbjct: 263 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 322

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
             P Y++D P G GK+ I  + +    +    + ++  I+  Y       PPK
Sbjct: 323 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 375


>gi|289432216|ref|YP_003462089.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
 gi|288945936|gb|ADC73633.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
          Length = 730

 Score =  225 bits (574), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 125/353 (35%), Positives = 200/353 (56%), Gaps = 11/353 (3%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
           + LT+ + L        E+   +++    + +++TP   +LI+  N  NDP+  Q +P  
Sbjct: 48  RDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNYENDPVFIQSVPSA 106

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            ELN    ++EDP+ ++  SP  GI HRYPDR+L  + + C +YCR C R+  VG     
Sbjct: 107 AELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDIDKN 166

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            LS  + +  L YI+   ++ +V+ +GGDPL+L    L+ +L  L+ I HVQ++R  +RV
Sbjct: 167 -LSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQVIRIGTRV 225

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V PQRI P L++ +++   PV+I  H NHP E +  +  A+  LA+AGI L +Q+VLL
Sbjct: 226 PVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPLGNQTVLL 284

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
             +ND P ++  L+   VE R++PYYL+  D A G SHFR +I +G +I+ +L    SG 
Sbjct: 285 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 344

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
             P Y++D P G GK+ I  + +    +    + ++  I+  Y       PPK
Sbjct: 345 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397


>gi|224367500|ref|YP_002601663.1| KamA1 [Desulfobacterium autotrophicum HRM2]
 gi|223690216|gb|ACN13499.1| KamA1 [Desulfobacterium autotrophicum HRM2]
          Length = 436

 Score =  225 bits (574), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 116/301 (38%), Positives = 183/301 (60%), Gaps = 3/301 (0%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDN 81
           EQ   +K+  + + +++TP   +LIN  +  +DPI RQ +    EL    ++ +DP+ ++
Sbjct: 51  EQRVLLKKTMDKFPMSITPYYLSLINTDDLEHDPIFRQSVASVRELEFSNDDMKDPLHED 110

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
             SP+ GI HRYPDR+L  + + C +YCR C R+  VG    ++   ++  A + YI+  
Sbjct: 111 KDSPVPGITHRYPDRVLFLVSNRCAMYCRHCTRKRKVGDVD-SIPGKQEILAGIDYIRNN 169

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
            +I +V+ +GGDPL+LS   L  +L  L  I+HV+++R  +R P+V P RI   +   LK
Sbjct: 170 PEIRDVLLSGGDPLLLSTSYLDWILTELEKIEHVEVIRIGTRTPVVLPYRITDAMTNMLK 229

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
               P++I  H NHP E +  A  A+++LANAGI L +Q+VLL G+ND P I+ +L+   
Sbjct: 230 RH-HPIWINTHFNHPREVTASARDALTKLANAGIPLGNQTVLLAGVNDCPRIMRSLVHKL 288

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
           V  R++PYYL+  DL+ G +HFR  + +G +I+ SL    SG C P Y++D PGG GK+ 
Sbjct: 289 VLNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESLIGHTSGFCVPTYVIDAPGGGGKIP 348

Query: 322 I 322
           +
Sbjct: 349 V 349


>gi|20807659|ref|NP_622830.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
 gi|20516205|gb|AAM24434.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
          Length = 419

 Score =  225 bits (573), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 128/351 (36%), Positives = 199/351 (56%), Gaps = 10/351 (2%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ ++  + L     + +E+I+ IK +S  Y  A++P  A+L++P NP  PI  + 
Sbjct: 70  WQIRNR-ISDVETLKKIVNLSEEEIENIKRVSTRYRWAISPYYASLMDPDNPFCPIRMRA 128

Query: 61  IPQKEELNI---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           IP  +EL     +P    DP+ +   SP   I  RYPDR+++ + + C ++CR C RR  
Sbjct: 129 IPSIKELTDKYGVP----DPMAEEYTSPAPLITRRYPDRLIINVTNQCGMFCRHCQRRRN 184

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           +G +       +D EAAL YI+   +I +V+ TGGDPL L  +++  +L  L  I HV+I
Sbjct: 185 IG-EVDYPAKHEDIEAALEYIRNNPEIRDVLITGGDPLTLEDEKIDWILSELDKIPHVEI 243

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
            R  +  P+  PQRI  EL + L +   P+YI    NHP E +EEA  A  +LA AG+ L
Sbjct: 244 KRIGTAAPVTFPQRITDELCKILTKH-LPLYINTQFNHPKEVTEEAKEACFKLARAGVAL 302

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLLKGIN+DP ++  L    + + +KPYY+ H     GT+HF  T+++G +I+  L
Sbjct: 303 GNQAVLLKGINNDPHVMKKLNHELLRIMVKPYYIFHAKSVQGTTHFVTTVQDGLEIMEQL 362

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           +   SGL  P+YI++ P G+GK  I    +  VG     I +    V +YP
Sbjct: 363 RGYTSGLAIPWYIINAPEGHGKTPIVPQYLLMVGKEYVLIRNWEGKVFEYP 413


>gi|91772337|ref|YP_565029.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
 gi|91711352|gb|ABE51279.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
          Length = 435

 Score =  225 bits (573), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 127/350 (36%), Positives = 201/350 (57%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            QL+H  + + + + L   N    E+ +++KE    + +++TP   +LI+  +  NDPI 
Sbjct: 29  WQLKHSIRDIETFERLLGINFEPPEK-EKLKETLEKFPLSITPYYLSLIDSDDFRNDPIF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q  P  EEL I  +E EDP+ ++  SP++GI HRYPDR+L  + +VC +YCR C R+  
Sbjct: 88  LQSFPSPEELIISADELEDPLSEDTDSPVEGITHRYPDRVLFHISNVCSMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG         K  E  + YI+   QI +V+ +GGDPL+LS   L  +L  +  I HV++
Sbjct: 148 VGDIDYIPEKEKILEG-IEYIRNTPQIRDVLLSGGDPLMLSDDFLDWILTEINSIPHVEV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR+P+V P RI  EL+  LK+   P+++  H NHP E +  +  A+ +LA+AGI L
Sbjct: 207 IRIGSRMPVVLPYRITDELVDVLKKH-HPIWLNTHFNHPREMTFSSRQALKKLADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND   I+  L+   V+ R++PYYL+  DL+ G SHFR  I +G +I+ +L
Sbjct: 266 GNQTVLLAGVNDCQRIIKKLVHKLVQNRVRPYYLYQCDLSEGLSHFRTPIGKGIEIMENL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D P G GK+ +  + I         + ++  ++  Y
Sbjct: 326 IGHTSGFSVPTYVIDAPHGGGKIPVMPNYIISWSTNRVILRNYEGVITSY 375


>gi|147668784|ref|YP_001213602.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
 gi|146269732|gb|ABQ16724.1| beta-lysine acetyltransferase / L-lysine 2,3-aminomutase
           [Dehalococcoides sp. BAV1]
          Length = 730

 Score =  225 bits (573), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 125/353 (35%), Positives = 200/353 (56%), Gaps = 11/353 (3%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64
           + LT+ + L        E+   +++    + +++TP   +LI+  N  NDP+  Q +P  
Sbjct: 48  RDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVFIQSVPSA 106

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            ELN    ++EDP+ ++  SP  GI HRYPDR+L  + + C +YCR C R+  VG     
Sbjct: 107 AELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDIDKN 166

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            LS  + +  L YI+   ++ +V+ +GGDPL+L    L+ +L  L+ I HVQ++R  +RV
Sbjct: 167 -LSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQVIRIGTRV 225

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V PQRI P L++ +++   PV+I  H NHP E +  +  A+  LA+AGI L +Q+VLL
Sbjct: 226 PVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITATSSRALGMLADAGIPLGNQTVLL 284

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
             +ND P ++  L+   VE R++PYYL+  D A G SHFR +I +G +I+ +L    SG 
Sbjct: 285 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 344

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
             P Y++D P G GK+ I  + +    +    + ++  I+  Y       PPK
Sbjct: 345 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397


>gi|115380257|ref|ZP_01467275.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
 gi|115362736|gb|EAU61953.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
          Length = 378

 Score =  225 bits (573), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 118/331 (35%), Positives = 184/331 (55%), Gaps = 3/331 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q RH   + AQ      L  +E+   ++E +  + + ++P   +LI+P +P  P+  Q I
Sbjct: 48  QQRHAVRSLAQLERYVPLTPQERAG-VQETAALFRVGISPYYLSLIDPEHPFCPVRMQSI 106

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P +EE  I P E  DP+G++   P + IVH+YPDR+L   L  C VYCR C RR +    
Sbjct: 107 PVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRRITKGG 166

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +   LS       +AYI+   ++ +V+ +GGDP ILS  RL+++L  L  I HV+++R  
Sbjct: 167 EAE-LSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRIG 225

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +RVP+  P R+   L   L+    PVY+  H NHP E + EA  A  RL + G+ + +Q+
Sbjct: 226 TRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQA 284

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VL++ +N D  I+  L    + +R++PYYLH  D+A G  H R  I +G +I+  ++   
Sbjct: 285 VLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGHT 344

Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
           +GL  P   +DLPGG GKV +    + + G 
Sbjct: 345 TGLAVPHLAVDLPGGGGKVTLQPDYVVERGE 375


>gi|116751432|ref|YP_848119.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116700496|gb|ABK19684.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB]
          Length = 360

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 117/296 (39%), Positives = 175/296 (59%), Gaps = 4/296 (1%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
            DP+ RQ +P   EL+      +DP+ +   SP+  +VHRYP+R+L  + H C ++CRFC
Sbjct: 51  GDPLWRQVMPDAMELSD-DAGLQDPLAEEALSPVPNLVHRYPNRVLWLVSHECALHCRFC 109

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
            R+    S     ++ +     L YI+E  Q+ +V+ +GGDPL+L   RL+ +L  LR+I
Sbjct: 110 TRKRRWSSP--LPMTGELLRDGLRYIRENPQVNDVLLSGGDPLLLDPSRLETILGELRHI 167

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            HV +LR  +RVP   P+R+  EL   L     P+++ IH NHP E +EE+  A + LA+
Sbjct: 168 PHVAVLRIGTRVPCALPERVTGELATMLARH-HPLFLNIHFNHPREITEESRRACALLAD 226

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AGI L SQ+VLL+ +NDD  +L  L +T + LR++PYYL   DL  GT+HFR  +  G +
Sbjct: 227 AGIPLGSQTVLLRDVNDDAHVLGELFQTLLGLRVRPYYLMQMDLTRGTAHFRTPLSRGLE 286

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           IVA L+ +ISG+  P  ++DLPGG GKV +  + I+ +G        +      YP
Sbjct: 287 IVARLRNRISGMAVPQLVVDLPGGLGKVPLVPNRIEHIGEDHVVFRSYQGAPCRYP 342


>gi|78355236|ref|YP_386685.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78217641|gb|ABB36990.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 454

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 113/295 (38%), Positives = 180/295 (61%), Gaps = 3/295 (1%)

Query: 29  KEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           K   + + +++TP   +LI+  +  +DP+  Q  P   ELN+ P +  DP+ ++  SP  
Sbjct: 58  KRTLDKFPMSITPYYFSLIDQEDYESDPVFMQAFPDIRELNVSPHDMADPLHEDEDSPAP 117

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           GI HRYPDR+L  + ++C +YCR C R+  VG  + +V      +  + YI+    I +V
Sbjct: 118 GITHRYPDRVLFHVSNLCSMYCRHCTRKRKVG-DRDSVPDRGQLKQGIEYIRRTPAIRDV 176

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           + +GGDPL+LS +RL  +L  +R I HV+I+R  SR+P+V P RI   L+  LK+   P+
Sbjct: 177 LLSGGDPLMLSDERLDWLLGEIRSIPHVEIIRIGSRMPVVLPYRITDGLLAVLKKH-HPL 235

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           ++  H NHP E +  +  A++R+A+AGI L +QSVLL  +ND P +   L +  V+ R++
Sbjct: 236 WLNTHFNHPRELTRTSRRALARMADAGIPLGNQSVLLADVNDCPRLFRTLNQKLVQNRVR 295

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           PYY++  DL+ G SHFR  + +G +I+ SL    SG+  P Y++D PGG GK+ +
Sbjct: 296 PYYMYQCDLSEGLSHFRTPVGKGIEIIESLVGHTSGMAVPTYVIDAPGGGGKIPM 350


>gi|21227036|ref|NP_632958.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1]
 gi|20905357|gb|AAM30630.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1]
          Length = 419

 Score =  224 bits (571), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/352 (35%), Positives = 205/352 (58%), Gaps = 9/352 (2%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q R++ +T+ ++L    L+   +  +IK+    + +A++P  A+LI+P +P  P+  Q 
Sbjct: 21  WQYRNR-ITTVEELEKLILLSDTEKRDIKKALEVFPMAISPYYASLIDPDDPECPVRLQA 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           +PQ  EL     E EDP+ ++  SP +   I HRYPDR+L  + + C +YCR C R+  V
Sbjct: 80  VPQSAELQKSSWELEDPLCEDQDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 139

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G+++    S K     + YI+   ++ +V+ +GGD L++S +RL  +L  L  I HV+I+
Sbjct: 140 GNREHD-YSEKAIREGIEYIRMHHEVRDVLLSGGDALLVSDERLDWLLGELFSIPHVEIV 198

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           R  +R P+  PQRI PEL + L   GK   V++  H NHP E + EA  A++ LA AGI 
Sbjct: 199 RLGTRAPVTLPQRITPELCEIL---GKYPSVWLNTHFNHPKEITPEAKKAMNMLACAGIP 255

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           L +QSVLL+ +ND P I+ NL    ++++ +PYYL+  DL+ G  HFR ++  G +I+  
Sbjct: 256 LGNQSVLLRRVNDCPVIIKNLCHELLKIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEM 315

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           L+   SGL  P +++D PGG GK+ +  + +    +    + ++  ++  YP
Sbjct: 316 LRGHTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICVYP 367


>gi|317154407|ref|YP_004122455.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316944658|gb|ADU63709.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 416

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 112/267 (41%), Positives = 164/267 (61%), Gaps = 2/267 (0%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           + R   P   E  +   E EDP+G+  H  + GIVHRYPDR+L      C  YCR+C R 
Sbjct: 111 LRRCIEPTIHEFVMDQSEAEDPLGEEGHMVVPGIVHRYPDRVLFLATDYCSTYCRYCTRS 170

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
            +VG + G    +K  ++A+AYI+    I +V+ +GGDPL L   RL  +L  LR I HV
Sbjct: 171 RLVG-RNGRKHDTKKWKSAIAYIRNTPAIRDVLLSGGDPLTLPDDRLDWLLTELRAIPHV 229

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
           +I+R  ++VP V PQRI PEL   L++   P++I++H  HP E + E + A + LA+AGI
Sbjct: 230 EIIRIGTKVPAVLPQRITPELTAMLRKH-HPLFISLHFAHPDELTAETVRACTMLADAGI 288

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
            L SQ+VLLKG+NDD   +  LM+  ++ R++PYYL+  D   G++HFR  +E+G +I+ 
Sbjct: 289 PLGSQTVLLKGVNDDTNTMKRLMQGLLKARVRPYYLYQCDPIPGSAHFRTRVEKGLEIIQ 348

Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKI 322
            L+   SG   P Y++D PGG GK+ +
Sbjct: 349 GLRGHTSGYAVPSYVIDAPGGGGKIPL 375


>gi|291286722|ref|YP_003503538.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290883882|gb|ADD67582.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 393

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 111/320 (34%), Positives = 186/320 (58%), Gaps = 4/320 (1%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           E  +    A+TP  A+L+   +  D + R  IP   E+     E +DP+G+++ SP+ G+
Sbjct: 73  ETCSGLPFAVTPYYASLLTGTSSCDAVRRTVIPTHMEMIKGRGEADDPLGEDSCSPVDGL 132

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           VHRYPDR+L  +   C  YCR+C R   +G    G +   +  + A+ YI+   Q+ +V+
Sbjct: 133 VHRYPDRVLFLVTEHCSTYCRYCTRSRKMGEIHSGNI--KERWQKAIDYIKATPQVRDVL 190

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            +GGDPL+L    ++ +L++L  I+HV+++R  ++ P+V PQRI   LI+ LK   +P++
Sbjct: 191 ISGGDPLVLPDASIKWLLESLSAIEHVEMIRIGTKAPVVLPQRITKSLIKILKSV-RPLF 249

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           ++IH  HP E + E + A + LA+AGI L SQ+VLLKG+ND  + L  L    +++R++P
Sbjct: 250 MSIHFTHPDELTAETVQACNMLADAGIPLGSQTVLLKGVNDSVDTLKGLYHGLLKVRVRP 309

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIK 328
           YYL+  D  +G+ HFR  +E G  ++  L+   +G   P Y++D PGG GK+ +     +
Sbjct: 310 YYLYQCDPISGSGHFRTKVETGLNMIKGLRGHTTGYAIPNYVIDAPGGGGKIPLIPDYFQ 369

Query: 329 KVGNGSYCITDHHNIVHDYP 348
               G   + ++    + YP
Sbjct: 370 GKSEGQIMLKNYQGNTYLYP 389


>gi|302392039|ref|YP_003827859.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501]
 gi|302204116|gb|ADL12794.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501]
          Length = 401

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/323 (40%), Positives = 200/323 (61%), Gaps = 5/323 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL++ ++T+A +L     I  +Q +EIKE +  + +++TP  A+LI+  +   PI  Q 
Sbjct: 22  WQLKN-SITTADELQQYFDIDDQQAEEIKEAAKIFPMSITPYYASLIDFDDELCPIKLQA 80

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +PQKEEL     E EDP+ +   SP+ G+ HRYPDR+LL + + C ++CR C R+  VG 
Sbjct: 81  VPQKEELEEYEYEMEDPLHEEEDSPVPGLTHRYPDRVLLMVTNYCSMFCRHCTRKRKVGD 140

Query: 121 QKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             G      D  +A + YI+   Q+ +V+ +GGDPL+L   +L+K++  L+ I HV+I+R
Sbjct: 141 --GNTQDDFDQIQAGIEYIKNNPQVRDVLLSGGDPLLLDLDKLEKIIARLKEIPHVEIVR 198

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             SRVP+V PQRI+ ELI  LK+   P++I  H NH  E +  +  A+++LA+ G  L +
Sbjct: 199 LGSRVPVVLPQRIDDELIARLKKYS-PLWINTHFNHKKEITSRSKKALAKLADNGFPLGN 257

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+ IND P ++ +LM   V  R++PYYL+  DL+ G  HFR +I  G +I+ SL  
Sbjct: 258 QTVLLRNINDSPAVMEDLMHKLVANRVRPYYLYQCDLSRGIEHFRTSISTGIEIIESLIG 317

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
             SG   P Y++D PGG GK+ I
Sbjct: 318 HTSGFAVPRYVVDAPGGGGKIPI 340


>gi|195952479|ref|YP_002120769.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932091|gb|ACG56791.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 365

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 124/338 (36%), Positives = 199/338 (58%), Gaps = 7/338 (2%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLI-NPHNPNDPIARQ 59
            QL+++ +T+ ++L     +  E+I     ++  Y  A+TP   +L+ NP +  DPI  Q
Sbjct: 15  WQLQNR-ITTLEELSKYIELTNEEIKFFDAVAEEYPFAVTPYYLSLVKNPKDKKDPIRLQ 73

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E++   ++   P   N  + +KG+ HRY DR L+ +   C VYCR C R+ +  
Sbjct: 74  IVPSPLEIDENAQQNSHPNALNEETFIKGLTHRYEDRALISVTSYCGVYCRHCMRKRIF- 132

Query: 120 SQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            ++GT  + K+  +    YI+    I +V+ +GGDPL L ++RL+ +L  L  I+H++++
Sbjct: 133 -KEGTHAAPKELLDVYFDYIKNHKTIKDVLISGGDPLTLDNERLKYILNNLSSIEHLEVI 191

Query: 179 RFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           R  SRVP+  PQR+ + EL+  L    K ++I  H NHP E +E+A  AI  L  AG+ +
Sbjct: 192 RIGSRVPVTLPQRLYDEELLDILSRYDK-LWINTHFNHPNEITEDAKVAIRNLLKAGVPV 250

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLLKG+NDD E +  LMR  + +++KP YL H D   GT HFR +IE+G +I+  +
Sbjct: 251 NNQAVLLKGVNDDKETMLELMRKLLSIKVKPQYLFHCDPITGTIHFRTSIEKGLEIMDYM 310

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
           + ++SG   P Y +DLPGG GKV +     KK+ +G Y
Sbjct: 311 RGRLSGFGIPTYAIDLPGGKGKVPLIPSYFKKLEDGLY 348


>gi|126178166|ref|YP_001046131.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus
           marisnigri JR1]
 gi|125860960|gb|ABN56149.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1]
          Length = 437

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 114/302 (37%), Positives = 180/302 (59%), Gaps = 3/302 (0%)

Query: 22  KEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGD 80
           K++  E++E ++ + + +TP   +LI+  +  NDPI  Q  P   EL + P++ EDP+ +
Sbjct: 51  KDERRELEETASRFPLRITPYYLSLIDAKDLWNDPIFMQCFPSPAELQVEPDDMEDPLAE 110

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
           +   P   I HRYPDR+L  + +VC +YCR C R+  VG    ++ S  +   +L YI+E
Sbjct: 111 DADHPAPCITHRYPDRVLFLVSNVCAMYCRHCTRKRKVGDVD-SIPSEAEVIESLDYIRE 169

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
              I +V+ +GGDP +L   RL  +L  L  I+HV+++R  +R P+V P RI  EL   L
Sbjct: 170 NPGIRDVLLSGGDPFMLPDDRLDWILTELDDIEHVEVVRIGTRTPVVLPYRITEELCAML 229

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                P+++  H NHP E +  +  A++RLA+AGI L +Q+VLL G+ND   I+  L+  
Sbjct: 230 ARH-HPLWVNTHFNHPAEITASSQKALARLADAGIPLGNQTVLLAGVNDCSRIMKTLVHK 288

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
            V  R++PYYL+  DL+ G +HFR  + +G +I+ +L    SG   P Y++D PGG GK+
Sbjct: 289 LVRNRVRPYYLYQCDLSEGLAHFRTPVSKGIEIIENLIGHTSGFAVPTYVIDAPGGGGKI 348

Query: 321 KI 322
            +
Sbjct: 349 PV 350


>gi|168699149|ref|ZP_02731426.1| lysine 2,3-aminomutase YodO family protein [Gemmata obscuriglobus
           UQM 2246]
          Length = 481

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 114/290 (39%), Positives = 174/290 (60%), Gaps = 3/290 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQK-EELNILPEEREDPIGDNNHSPLKGIVHRY 93
           Y +A+ P   +LI+P +PNDPI  Q +P   E  +    E +DP+ +   SP+ G+ HRY
Sbjct: 83  YKLAIPPYFFSLIDPEDPNDPIRLQSVPSPLEAESASGHELDDPLEEEKDSPVPGLTHRY 142

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
            DR LL     C +YCR+C R+    ++ G    S D E  + Y++E  +I +VI +GGD
Sbjct: 143 SDRALLVTTPNCTMYCRYCTRKRATLTRGGWEGVSADDERMIQYVREHREIKDVIVSGGD 202

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIH 212
           PL L   +L+  L++L+ +KHV ++R  +RVP+  PQR+ +PELI  L  A K VY+  H
Sbjct: 203 PLTLPMGKLRYYLESLKAMKHVDVIRVGTRVPVTLPQRLYDPELIDLLGSAEK-VYVQTH 261

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
            NHP E + EA+ A   L  AG+ + + +VLLKG+NDD   + +L R  +  +++PYYL 
Sbjct: 262 FNHPREVTPEAVRACKSLLRAGVPINNHTVLLKGVNDDVGTMRSLFRALLRAKVRPYYLF 321

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           H D   G  HFR ++ +G +I+  L+  +SG+  P Y++D P G GK+ I
Sbjct: 322 HCDPVTGAGHFRTSVWKGLEIMEGLRGHMSGIGIPTYVVDGPQGSGKIPI 371


>gi|78045085|ref|YP_361273.1| putative L-lysine 2,3-aminomutase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77997200|gb|ABB16099.1| putative L-lysine 2,3-aminomutase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 411

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 117/295 (39%), Positives = 181/295 (61%), Gaps = 5/295 (1%)

Query: 27  EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE-DPIGDNNHSP 85
           E++E+S  Y  A++P   +LI+P +P+  I +Q IP    L +L +  E DP+ +   SP
Sbjct: 91  ELEEVSKVYRFAISPYYLSLIDPDDPDCGIKKQSIPSI--LEVLDDTGELDPMNEAGTSP 148

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           +  +  RYPDR+++ + ++C +YCR C RR  +G         +  EA L YI+E  +I 
Sbjct: 149 VAAVTRRYPDRLIINVTNMCGMYCRHCQRRRNIGEVDRKTPREQIKEALL-YIREHKEIR 207

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +V+ TGGD L+LS   L  +LK L  I HV+I R  +RVP+  PQR+   L++ LK+   
Sbjct: 208 DVLITGGDALLLSDLELDWILKELSEIPHVEIKRIGTRVPVTLPQRVTDNLVKILKKY-P 266

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           P+YI    NHP E + EA  A+ +L  AG++L +Q+VLLKG+ND+P I+  L    +++R
Sbjct: 267 PIYINTQFNHPREVTPEAKKAVDKLIEAGVVLGNQAVLLKGVNDNPVIMEKLNHELLKIR 326

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           ++PYY+       GT HF   IE+G +I+ SL+   SGL  P+YI++ PGG+GK+
Sbjct: 327 VRPYYIFQAKRVRGTMHFVPKIEDGLRIMESLRGYTSGLAVPYYIVNAPGGFGKI 381


>gi|258513920|ref|YP_003190142.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257777625|gb|ACV61519.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 432

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 120/328 (36%), Positives = 193/328 (58%), Gaps = 4/328 (1%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           + +E+  +I+++   +  +++P  A+LI P + NDP+  Q +P  +EL++      DP+ 
Sbjct: 92  LSEERCAQIRKVGLKFRWSVSPYYASLIVPDSLNDPVMLQSVPSIKELDV--SGYADPMA 149

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +   SP   I  RYPDR+++ + + C +YCR C RR  +G       + +D  AAL YI+
Sbjct: 150 EELTSPAPCITRRYPDRLIINVTNKCAMYCRHCQRRRGIGDVDRHQ-THQDLLAALDYIR 208

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
           +  +I +V+ TGGD L+LS K++  +L  L  IKHV+I R  +R  +  PQRI PEL + 
Sbjct: 209 KNKEIRDVLITGGDALLLSDKKIDWLLSELDSIKHVEIKRLGTRTIVTLPQRITPELCEV 268

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           LK+   PVYI    NHP E + E+  A   L +AG++L +Q+VLLKGIN++P ++  L +
Sbjct: 269 LKQH-PPVYINTQFNHPQEITPESKLACDMLVSAGVVLGNQAVLLKGINNNPHVMKKLNQ 327

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             +++R++PYY+ H     GT HF  ++ EG +I+  L+   SGL  P YI++ P GYGK
Sbjct: 328 ELLKIRVRPYYIFHAKQVIGTRHFITSVNEGIEIMEKLRGYTSGLAVPTYIINAPNGYGK 387

Query: 320 VKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           + I    +  + N S  + +  N   DY
Sbjct: 388 IPILPKYLLGIDNSSVRLRNWENRQIDY 415


>gi|228994304|ref|ZP_04154195.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442]
 gi|228765454|gb|EEM14117.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442]
          Length = 367

 Score =  222 bits (565), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 119/327 (36%), Positives = 185/327 (56%), Gaps = 5/327 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           +Q R++ +   ++L     +  E+   IK     Y  A+TP  A+L++  +P+ PI +Q 
Sbjct: 12  LQFRNR-IQKIEELKQYINVTPEEEQAIKRCEGIYRWAVTPYYASLMDKDDPSCPIRKQA 70

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   E  I      DP+GD  +     IVH+YPDRI++ +   CPVYCR C R+     
Sbjct: 71  IPSSGEFMINEYSDVDPVGDTKYRVTNRIVHKYPDRIIMLITDQCPVYCRHCTRKYHTTD 130

Query: 121 QKGTVLSSKDTEA---ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
             GT     + E       YI+   +I +V+ TGGDPL  S +RL+ +LK LR I HV+I
Sbjct: 131 LDGTYFERSEAEGYEIDFEYIENHPEIRDVLLTGGDPLTYSDRRLESILKRLRSIPHVEI 190

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +RF SR P++ PQRI  E  + L E   P+++  H NHP E ++E+  A++ L   G+ +
Sbjct: 191 IRFGSRYPVLLPQRITKEFCEML-EKYHPIWLNTHFNHPKEVTKESAHAVNLLLKHGVPV 249

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLLKGINDD + +  L++  +++R++PYYL+H D   G SHF  ++E+G +I+  L
Sbjct: 250 QNQSVLLKGINDDLDTMKQLVQALLKIRVRPYYLYHCDNVTGVSHFMTSLEKGVEIMRGL 309

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDT 324
               +G   P YI+    G   + ++T
Sbjct: 310 VGHTTGFATPNYIITTINGKIPIPLET 336


>gi|300723094|ref|YP_003712392.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061]
 gi|297629609|emb|CBJ90212.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061]
          Length = 392

 Score =  222 bits (565), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 181/319 (56%), Gaps = 5/319 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLR+   TS +DL     +   +   I+ +   Y    TP  A+L++ ++ N PI  Q 
Sbjct: 18  FQLRNLIKTS-EDLEKWIALTDNEKKAIEAVKGKYLWQSTPYYASLMDKYDANCPIRLQT 76

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   E+ I      DP+GD ++     ++H+YP+RI+L +   CPVYCR C R+     
Sbjct: 77  IPHLREMKIETNSDNDPVGDTSNLKTARVIHKYPNRIVLLVSDTCPVYCRHCTRKFHTTD 136

Query: 121 QKGTVLSSK---DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
            +GT   S      E   AYI+   +I +V+ TGGDPLI   K L+ ++K LR IKH+ I
Sbjct: 137 VEGTYFGSDLAASYEEDFAYIESHPEIDDVLLTGGDPLIHYDKFLEVIIKRLRSIKHINI 196

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR P+  PQRI  +  Q L E   P+++  H NHP E +EEA  A  RL   GI +
Sbjct: 197 IRIGSRYPVFAPQRITEKFCQML-EKYHPIWVNTHFNHPKEVTEEAATACDRLLRHGIPV 255

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLLKGINDD E + +L++  + +R++PYYL+H D  +G SHF  T+E+G++I+ ++
Sbjct: 256 QNQSVLLKGINDDVETMRSLLKALLRIRVRPYYLYHCDNVSGVSHFMTTLEKGKEIMDAM 315

Query: 298 KEKISGLCQPFYILDLPGG 316
               +G   P Y++    G
Sbjct: 316 VGFETGFSVPQYVVTTTLG 334


>gi|149179692|ref|ZP_01858197.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1]
 gi|148851884|gb|EDL66029.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1]
          Length = 468

 Score =  221 bits (564), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 116/342 (33%), Positives = 194/342 (56%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + ++  +    + +TP  A L+N  +   PI  Q +P  +E
Sbjct: 36  TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYAWLMNEEDDRCPIRMQSVPIGKE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  IHKTKYDMEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+ YI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDEAINYIRETPQVRDVLLSGGDGLLINDKILEYVLKNLRDIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   LK+   PV++  H N   E +EE+  A   L +AG+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKKACEMLVDAGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D PGG GK+ +  + +         + +   ++  YP
Sbjct: 334 PTFVVDAPGGGGKIALQPNYMISQSADKVVLRNFEGVITTYP 375


>gi|225849905|ref|YP_002730139.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1]
 gi|225646470|gb|ACO04656.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1]
          Length = 378

 Score =  221 bits (563), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/344 (36%), Positives = 196/344 (56%), Gaps = 7/344 (2%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ + S Q+L     I K++ +  +++S  +    TP   +L+   +  DP+ RQ 
Sbjct: 28  WQLKNR-IKSIQELEKVFSIDKKKKEIFQKVSPVFHFGTTPYYISLVKKPDYTDPVFRQI 86

Query: 61  IPQKEELN--ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR-REM 117
            P  EE++  I      DP  +   SP++GI HRYPDR+L ++   C VYCR C R R  
Sbjct: 87  FPSFEEIDPDIQNNGSNDPFNEE-RSPVEGITHRYPDRVLFRVTTFCSVYCRHCMRKRNF 145

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           +  ++    S KD +  + YI++   I EV+ +GGDPL L +K+L  +L  L+ IKHV I
Sbjct: 146 IYGERAK--SKKDIDIMIEYIRKNRSIREVLISGGDPLTLPNKKLDYILGRLQGIKHVDI 203

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR P+V+P R   E +  L E    ++I  H NHP E ++E   A+  + + G  +
Sbjct: 204 IRIGSREPVVNPFRFYDENLLELFERYDKLWIVTHFNHPNEITQETKKAVKNILSTGTPV 263

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
           L+Q+VLLKGINDD  I+  LMR+ + ++IKPYYL   D   G  HFR  I++G +I+  L
Sbjct: 264 LNQTVLLKGINDDKYIIEELMRSLLRVKIKPYYLFFCDPTKGVLHFRTDIKKGIEIMEYL 323

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
           + ++SGL  P Y +DLP G GKV +    I ++ + S    ++ 
Sbjct: 324 RGRLSGLGIPTYAVDLPEGKGKVPLLPEYIVEINDKSTVFRNYE 367


>gi|51246056|ref|YP_065940.1| hypothetical protein DP2204 [Desulfotalea psychrophila LSv54]
 gi|50877093|emb|CAG36933.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 353

 Score =  221 bits (563), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 116/280 (41%), Positives = 172/280 (61%), Gaps = 5/280 (1%)

Query: 53  NDPIARQFIPQ-KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
            DPI +Q IP  +EE + +    EDP+G+   SP+  +VH+YPDR LL + + C VYCRF
Sbjct: 56  GDPIWKQCIPDPREEEDFIC--MEDPLGEEALSPVPNLVHKYPDRALLLVTNQCAVYCRF 113

Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           C R+ MVG+++  + + ++ +A   Y++    I EV+ +GGDPL+L+  ++  +L  L+ 
Sbjct: 114 CTRKRMVGTERMHI-TEENLQACYDYLRRTPAIREVLISGGDPLLLADDKIDHILSELQS 172

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
           I  + ++R  SRVP   P RI PEL+  L++   P+YI  H NHP E + EA  A + LA
Sbjct: 173 IPSIDVIRIGSRVPCTLPMRITPELVAILRKY-HPLYINTHFNHPRELTPEAKKACALLA 231

Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
           + GI L  Q+VLLKG+ND+ + L  L    +++R+KPYYL   DL  GT+HFR T + G 
Sbjct: 232 DGGIPLGCQTVLLKGVNDNAQTLKELFLGLLKMRVKPYYLFQADLTRGTNHFRTTTKTGI 291

Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331
            I+  L   ISG+  P   LD PGG GK+ +  + IK+ G
Sbjct: 292 DIMRQLYGHISGMAIPRLALDAPGGKGKIPLSPNYIKESG 331


>gi|307719756|ref|YP_003875288.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192]
 gi|306533481|gb|ADN03015.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192]
          Length = 324

 Score =  220 bits (561), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/310 (38%), Positives = 172/310 (55%), Gaps = 5/310 (1%)

Query: 39  LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98
           +TP    L + H     +ARQ  P   E   LP E  DP+ D  HSPL  +VHRYPDR L
Sbjct: 7   VTPYYRRLADAHPA---LARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYPDRAL 63

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C  YCRFCFRR    S   + L+    +A LAY++E  ++ EV+ +GGDPL+L 
Sbjct: 64  ILVTDRCAAYCRFCFRRHFTASGASS-LTPGQEQAILAYLREHPEVEEVLLSGGDPLMLP 122

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
             RL  +L  LR ++   ++R  +R+P+V P RI    +  +  A +P+++  H NHP E
Sbjct: 123 DTRLAALLSGLRALRPGLVIRLGTRIPVVLPARIT-ARLARILAAARPLWVVTHFNHPAE 181

Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
            + EA AA+  L   G+ +++Q+VLL+G+ND  E LA L R  +   +KPYYL   DLAA
Sbjct: 182 LTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQGDLAA 241

Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           GTSHFR  +     +   L   +SGL  P   +DLP G GKV++   ++ +     Y + 
Sbjct: 242 GTSHFRTPLSRTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETWYYLQ 301

Query: 339 DHHNIVHDYP 348
                ++ YP
Sbjct: 302 GPDGGLYRYP 311


>gi|315185344|gb|EFU19118.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta thermophila
           DSM 6578]
          Length = 324

 Score =  220 bits (561), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 118/310 (38%), Positives = 173/310 (55%), Gaps = 5/310 (1%)

Query: 39  LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98
           +TP    L + H     +ARQ  P   E   LP E  DP+ D  HSPL  +VHRYPDR L
Sbjct: 7   VTPYYRRLADTHPA---LARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYPDRAL 63

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C  YCRFCFRR    S + + L+    +A LAY++E  ++ EV+ +GGDPL+L 
Sbjct: 64  ILVTDRCAAYCRFCFRRHFTASGESS-LTPGQEQAILAYLREHPEVEEVLLSGGDPLMLP 122

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
             RL  +L  LR ++   ++R  +R+P+V P RI    +  +  A +P+++  H NHP E
Sbjct: 123 DTRLAALLSGLRALRPGLVIRLGTRIPVVLPTRIT-ARLARILAAARPLWVVTHFNHPAE 181

Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
            + EA AA+  L   G+ +++Q+VLL+G+ND  E LA L R  +   +KPYYL   DLAA
Sbjct: 182 LTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQGDLAA 241

Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           GTSHFR  +     +   L   +SGL  P   +DLP G GKV++   ++ +     Y + 
Sbjct: 242 GTSHFRTPLSHTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETWYYLQ 301

Query: 339 DHHNIVHDYP 348
                ++ YP
Sbjct: 302 GPDGGLYRYP 311


>gi|94270918|ref|ZP_01291853.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
 gi|93450620|gb|EAT01735.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
          Length = 365

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/312 (40%), Positives = 173/312 (55%), Gaps = 7/312 (2%)

Query: 26  DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
           + ++ +   Y + + P   +LI    P DP+ RQ IP   EL       ED + +   SP
Sbjct: 38  EPLRAVCRRYPLRINPYYLSLIK--QPGDPLWRQAIPDPRELTD-SHCPEDSLHEEALSP 94

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           +  +VH+YPDR LL     C +YCRFC R+  VG  +      +  +AAL Y+     I 
Sbjct: 95  VPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGGRHR-LQAALDYLAATPAIH 153

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +V+ +GGDPL+L+   L  +L  LR I H++I+R  SRVP   PQR+   L   LK    
Sbjct: 154 DVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMGSRVPCTLPQRVTTRLAGILKRF-H 212

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           P+Y+  H NHP E + EA  A  RLA AGI L +Q+VLLKG+NDD   +  LMR  + +R
Sbjct: 213 PLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQTVLLKGVNDDAATIKGLMRGLLRIR 272

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI--D 323
           +KPYYL   DL+ GT HFR  +E+G  I+  L    SGL  P   LD PGG GK+ +  D
Sbjct: 273 VKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLATPTLALDAPGGMGKIPLTPD 332

Query: 324 THNIKKVGNGSY 335
            H + K G  ++
Sbjct: 333 YHQVLKAGKLTF 344


>gi|288556721|ref|YP_003428656.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4]
 gi|288547881|gb|ADC51764.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4]
          Length = 478

 Score =  219 bits (559), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 113/342 (33%), Positives = 193/342 (56%), Gaps = 2/342 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+ +  DL     +  E+ + ++  +    + +TP  A+L+NP +P  PI  Q +P  EE
Sbjct: 36  TIRTLDDLKQVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPIGEE 95

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G Q G  +
Sbjct: 96  IYKTKYDMEDPLEEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  + A+ YI+   ++ +V+ +GGD L+++   L+ +LK LR I HV+I+R  +R P+
Sbjct: 155 PKKQLDGAIDYIKNTPEVRDVLISGGDGLLINDTILEYILKNLRAIPHVEIIRIGTRAPV 214

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   LK+   PV++  H N   E +EE+  A   L N+G+ + +Q+V+L G
Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKNACEMLVNSGVPVGNQAVILAG 273

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND   I+  L +  V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   
Sbjct: 274 INDSVPIMKKLCQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYSV 333

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           P +++D P G GK+ +  + +         + +   ++  YP
Sbjct: 334 PTFVVDAPHGGGKITLQPNYMISQSPDKVVLRNFEGVITTYP 375


>gi|237755590|ref|ZP_04584206.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692253|gb|EEP61245.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 374

 Score =  219 bits (559), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 119/317 (37%), Positives = 184/317 (58%), Gaps = 5/317 (1%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TS  +L     IK E+  +  +IS  +    TP   +LINP++ NDPI +Q +P  +E+
Sbjct: 34  ITSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQILPDIKEI 91

Query: 68  NILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           +   +E    DP  ++  SP+ G+ HRYPDR+L +  + C VYCR C R+ M    +   
Sbjct: 92  DEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMFLEDE-RA 150

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            + ++ +A   YI+    I EV+ +GGDPL L +K+++ +LK L  I H+ ++R  SR  
Sbjct: 151 RTKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVIRIGSREL 210

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V+P R   E +  L E    V++  H NHP E + E   A+  + + G  +L+Q+VLLK
Sbjct: 211 VVNPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVLNQTVLLK 270

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GIND  E + NLMR  ++++IKPYYL   D   G  HFR  +E G +I+  L+ ++SGL 
Sbjct: 271 GINDSKETIENLMRDLLKVKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLRGRLSGLG 330

Query: 306 QPFYILDLPGGYGKVKI 322
            P + +DL GG GKV +
Sbjct: 331 IPTFAVDLLGGLGKVPV 347


>gi|256378515|ref|YP_003102175.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM
           43827]
 gi|255922818|gb|ACU38329.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM
           43827]
          Length = 381

 Score =  219 bits (558), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 113/314 (35%), Positives = 180/314 (57%), Gaps = 5/314 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
             +RH+ +T+   L     +  ++   I   +  Y  ++TP  A+L++P +P  PI +Q 
Sbjct: 25  WHMRHR-VTTLDKLREWVRVSPQEEAAISGTAGKYRWSVTPYYASLMDPDDPLCPIRQQA 83

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P + EL   P+   DP+GD  +     +VH+YPDR++L +   CPVYCR C R+     
Sbjct: 84  VPAQGELLEFPDAEVDPVGDMFYRKTNRVVHKYPDRVVLLVTETCPVYCRHCTRKFHTTD 143

Query: 121 QKGTVLSSKDT---EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
            +GT     +    E  L YI+E  +I +V+ TGGDPL    ++L++++  LR I  V+I
Sbjct: 144 VEGTYFRDNEGGGYEEDLRYIREHPEIRDVLLTGGDPLSYRDEKLEEIISGLRAIPSVEI 203

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR P++ PQR+  E  + L     PV++  H NHP E + EA AA+ RL   G+ +
Sbjct: 204 IRIGSRFPVLLPQRVTDEFCEMLARH-HPVWLNTHFNHPREITPEAAAAVDRLLRHGVPV 262

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLLKGINDD   +  LM   + +R++PYYL+H D   G SHF  ++E+G +I+  L
Sbjct: 263 GNQTVLLKGINDDVPTMRKLMTELLRIRVRPYYLYHCDNVTGVSHFMTSVEKGLEIMEGL 322

Query: 298 KEKISGLCQPFYIL 311
           +  ++G   P Y+L
Sbjct: 323 QGHMTGFGVPQYVL 336


>gi|320161902|ref|YP_004175127.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1]
 gi|319995756|dbj|BAJ64527.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1]
          Length = 446

 Score =  219 bits (558), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 129/347 (37%), Positives = 199/347 (57%), Gaps = 11/347 (3%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H+ L S +D +   L   E   +       + + +TP   +LINP +P+DPI +Q 
Sbjct: 28  WQLSHR-LNSVED-FEQVLRLTESERKALTTQGLFRVDITPYFVSLINPDDPDDPIRKQV 85

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+ EE+       ED + ++ HSP+ G+VHRYPDR+L+ +   C  YCR+C R  +VG 
Sbjct: 86  IPRAEEIVPFTGMMEDSLAEDRHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 145

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T  S  + E  + Y++   Q+ +V+ +GGDPL L+ K L+++L  LR I+H++I+R 
Sbjct: 146 PSAT-FSRAEFEMQIEYLKRTPQVRDVLLSGGDPLTLAPKLLEELLSRLREIEHIEIIRI 204

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SRVP+  PQRI  E    + +   PV++ IH NHP E ++E   A  RL  AG+ L +Q
Sbjct: 205 GSRVPVFLPQRITQEFCDMVSKY-HPVWMNIHVNHPNEITQELADACDRLTRAGVPLGNQ 263

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL G+ND   +   L++  V +R++PYYL+  DL  G  HFR  + +G +I+  L+  
Sbjct: 264 SVLLAGVNDCVHVQRKLVQDLVRIRVRPYYLYQCDLVEGAGHFRTPVAKGIEIIEGLRGH 323

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P Y++D PGG GK+ +       + N    ++DH  I+ +Y
Sbjct: 324 TSGYAVPTYVVDAPGGGGKIPV-------MPNYLISMSDHKIILRNY 363


>gi|255994192|ref|ZP_05427327.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989]
 gi|255993860|gb|EEU03949.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989]
          Length = 426

 Score =  219 bits (557), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 116/305 (38%), Positives = 190/305 (62%), Gaps = 3/305 (0%)

Query: 18  NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
           NL ++E+ D I +I + + + +TP  A+L++ ++P  P+  Q +P   E +    +  DP
Sbjct: 50  NLTEQEKAD-ITKILDGFRVGITPYYASLMDENDPMCPVRMQAVPTILEAHRSEADLLDP 108

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
           + ++  SP  G+ HRYPDR+L  +   C +YCR C RR + G   G   S +D +A +AY
Sbjct: 109 LHEDEDSPAPGLTHRYPDRVLFLVTDQCSMYCRHCTRRRLAGETDG-ARSIEDIDACIAY 167

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
           I++  Q+ +V+ +GGD L++    L+ V+K LR I HV+++R  SR P+V PQRI PEL+
Sbjct: 168 IKKTPQVRDVLLSGGDALLIDDDVLEYVIKNLRDIPHVEVVRIGSRTPVVCPQRITPELV 227

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
           + L++   PV++  H NH  E ++ + AA++ LA+AGI L +QSVLL+G+ND P  +  L
Sbjct: 228 KMLRKY-HPVWLNTHFNHKREVTDTSRAALALLADAGIPLGNQSVLLRGLNDCPHKMREL 286

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
           +   V+ R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   P +++D PGG 
Sbjct: 287 VHEMVKNRVRPYYIYQCDLSLGIEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGG 346

Query: 318 GKVKI 322
           GK  +
Sbjct: 347 GKTPV 351


>gi|94263390|ref|ZP_01287204.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
 gi|93456226|gb|EAT06360.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
          Length = 365

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/312 (39%), Positives = 172/312 (55%), Gaps = 7/312 (2%)

Query: 26  DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
           + ++ +   Y + + P   +LI    P DP+ RQ IP   EL       ED + +   SP
Sbjct: 38  EPLRAVCRRYPLRINPYYLSLIK--QPGDPLWRQAIPDPRELTD-SHCPEDSLHEEALSP 94

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           +  +VH+YPDR LL     C +YCRFC R+  VG  +      +  +AAL Y+     I 
Sbjct: 95  VPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGGRHR-LQAALDYLAATPAIH 153

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +V+ +GGDPL+L+   L  +L  LR I H++I+R  SRVP   PQR+   L   LK    
Sbjct: 154 DVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMGSRVPCTLPQRVTTRLAGILKRF-H 212

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           P+Y+  H NHP E + EA  A  RLA  GI L +Q+VLLKG+NDD   +  LMR  + +R
Sbjct: 213 PLYLNTHFNHPRELTAEAATACGRLAAGGIPLGNQTVLLKGVNDDAATIKELMRGLLRIR 272

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI--D 323
           +KPYYL   DL+ GT HFR  +E+G  I+  L    SGL  P   LD PGG GK+ +  D
Sbjct: 273 VKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLATPTLALDAPGGMGKIPLTPD 332

Query: 324 THNIKKVGNGSY 335
            H + K G  ++
Sbjct: 333 YHQVLKAGKLTF 344


>gi|225181359|ref|ZP_03734803.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
           alkaliphilus AHT 1]
 gi|225167940|gb|EEG76747.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
           alkaliphilus AHT 1]
          Length = 416

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/320 (35%), Positives = 180/320 (56%), Gaps = 3/320 (0%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           ++++      A TP   +L+NP +PN P+ RQ IP  EEL + P  ++DP+G+   SP  
Sbjct: 96  VRKVGEKNRWATTPYYLSLMNPDDPNCPVRRQAIPATEEL-LNPVGKDDPMGEQYTSPAP 154

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
            I  RYPDR+++ + + C +YCR C RR  +G +   + + +D +AAL Y++   +I +V
Sbjct: 155 AITRRYPDRLIINVTNQCGMYCRHCQRRRNIG-EVDRMTAREDLQAALDYVRNHPEIRDV 213

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           + TGGD L+L+ + +  +L  L  I HV+I R  SR  +  P R+  EL   L E   PV
Sbjct: 214 LLTGGDALMLNEEIIDWLLTELDNIPHVEIKRLGSRTLVTMPMRVTDELCAVL-EKHSPV 272

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           YI  H N+P E +     A  +L  AG+ L +Q+VLL G+NDDP ++  L    +++ I+
Sbjct: 273 YINTHFNNPAEVTPAVAEATRKLTRAGVSLGNQAVLLAGVNDDPHVMKKLNHMLLQVMIR 332

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
           PYY+ H     GT+HFR  +E G +I+  L+ + SG+  P +I++ P GYGK  +    +
Sbjct: 333 PYYIFHAKAVTGTAHFRTRVEVGIEIMEHLRGQTSGMAIPTFIVNAPEGYGKTPMLPEYL 392

Query: 328 KKVGNGSYCITDHHNIVHDY 347
              G     I    N V +Y
Sbjct: 393 ISSGRDKIFIRTWENRVFEY 412


>gi|189913041|ref|YP_001964930.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|189913370|ref|YP_001964599.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|167777717|gb|ABZ96017.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167781438|gb|ABZ99735.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 354

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 122/341 (35%), Positives = 189/341 (55%), Gaps = 4/341 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +T   DL     +  E+ D   +  + +  A+TP     I+  +P+ PI +Q 
Sbjct: 8   WQLQNR-ITQLADLETKITLTTEERDSFAKAYDQFQFAVTPYYLGRIDNKDPHCPIRKQI 66

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P+  EL     E +DP+ +  H P+KG+ HRYPDR +  + HVC VYCRFC R+  V +
Sbjct: 67  LPRAGELVRKQNETDDPLAEEIHMPVKGVTHRYPDRAIWYISHVCAVYCRFCTRKRKVST 126

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            + T   S + E AL Y + ++++ EVI +GGDPL LS   L  +L  L+ I H+  +R 
Sbjct: 127 PEETPNRS-EWEKALDYFRGETKLKEVILSGGDPLTLSDSSLDYLLGELKKIPHLNQIRI 185

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
           H+R P+  P R+   L     +   P+Y+  H NHP E S+E    + R+   G + + +
Sbjct: 186 HTRHPVTMPMRLTESLNSVFSKYF-PLYMVTHFNHPNEISDETKFYVMRMIKEGHVSIFN 244

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL GINDD  IL++L    + + IKPYYLH  D   G+S F + +E+G +I   L+ 
Sbjct: 245 QSVLLSGINDDANILSDLNYKLISIGIKPYYLHQCDEVFGSSDFVVPLEKGIEIYRKLRG 304

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340
             SG+  P Y+ DL GG GKV +    ++K  +  Y   ++
Sbjct: 305 FHSGITIPSYVKDLTGGGGKVLLSPDYLQKKTDKGYLFQNY 345


>gi|108761049|ref|YP_632864.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
 gi|108464929|gb|ABF90114.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
          Length = 410

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 113/322 (35%), Positives = 178/322 (55%), Gaps = 4/322 (1%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           ++E S  + I ++P   +LI+P +P  P+  Q IP + E  I P E  DP+G++   P +
Sbjct: 65  VQETSALFRIGISPYYLSLIDPEHPFCPVRMQSIPVRAEARIRPGELADPLGEDKTRPEE 124

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWE 146
            IVH+YPDR+L   L  C VYCR C RR +  +Q G   LS +     + Y++   ++ +
Sbjct: 125 CIVHKYPDRVLFLALDTCSVYCRHCTRRRI--TQGGVAELSKEQLRRGVDYVRSHPEVRD 182

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           V+ +GGDP +LS  RL+++L  L  I HV+++R  +RVP+  P R+   L + L+    P
Sbjct: 183 VLISGGDPFMLSDSRLEELLAPLSEIPHVEMIRIGTRVPVCLPMRVTDALAKTLRRYA-P 241

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
           V++  H NHP E + EA  A  RL + G+ + +Q+VL++ +N D  I+  L    +  R+
Sbjct: 242 VFVVTHFNHPKEVTPEAREACERLVDHGVPVENQAVLMRQLNSDARIIKELSHLLLRSRV 301

Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +PYYLH  D+A G  H R  I +G +I+  L+   +GL  P   +DLPGG GKV +    
Sbjct: 302 RPYYLHQMDVAEGCEHLRTPIAKGLEIIQQLRGYTTGLAVPHLAVDLPGGGGKVTLQPDY 361

Query: 327 IKKVGNGSYCITDHHNIVHDYP 348
             + G       ++      YP
Sbjct: 362 AVEYGAQETVFRNYKGERFTYP 383


>gi|258516088|ref|YP_003192310.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257779793|gb|ACV63687.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 408

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/303 (39%), Positives = 179/303 (59%), Gaps = 11/303 (3%)

Query: 24  QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ----KEELNILPEEREDPIG 79
           Q+++IK++   Y  A++P   +L    N N PI +QFIP     ++EL +      DP+ 
Sbjct: 84  QLEDIKKVERVYRWAVSPYYLSLSAVDNVNCPIRKQFIPSILELQDELGL-----SDPVD 138

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           + N SP K +V RYPDR+++K+ + C  +CR C R+  +G Q     SS + E A+ YI+
Sbjct: 139 EKNTSPTKAVVRRYPDRLIIKVTNQCASFCRHCQRKRTIGKQDLHT-SSGNIEKAVDYIK 197

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
           +  +I +V+ TGGD L+LS K+L  +L  L  I HV+I R  +RVP+  P RI  +L   
Sbjct: 198 KNPEIRDVLITGGDALLLSDKKLDWLLTELDNINHVEIKRIGTRVPVTLPMRITEKLCGI 257

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           L     P+YI    NHP E + EA  A ++L  AG++L +QSVLLK IND+P I+  L +
Sbjct: 258 LGNH-PPLYINTQFNHPLEVTPEAATACNKLIQAGVVLSNQSVLLKEINDNPHIIKKLNQ 316

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             +++R++PYYL H     GT HF   +  G +I+  L+   SGL  P YI+++ GG GK
Sbjct: 317 ELLKIRVRPYYLFHAMPVKGTRHFSTKLSVGLEIMEKLRGYTSGLAIPSYIVNVNGGLGK 376

Query: 320 VKI 322
           V I
Sbjct: 377 VPI 379


>gi|94266932|ref|ZP_01290585.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
 gi|93452384|gb|EAT03003.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
          Length = 365

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 130/336 (38%), Positives = 182/336 (54%), Gaps = 10/336 (2%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           +L   +LTS  +L     +  E    ++ + + Y + + P   +LI    P DP+ RQ I
Sbjct: 17  RLLAASLTSPDELAACFDLDPE---PLRAVCHRYPLRINPYYLSLIE--QPGDPLWRQAI 71

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   EL       ED + +   SP+  +VH+YPDR LL     C +YCRFC R+  VG  
Sbjct: 72  PDPRELTD-SHCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGG 130

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +      +  +AAL Y+     I +V+ +GGDPL+L+   L  +L  LR I  ++I+R  
Sbjct: 131 RIVGGRHR-LQAALDYLAATPAIHDVLLSGGDPLLLTDDELLWLLAELRKIPQLEIIRMG 189

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SRVP   PQR+   L   LK    P+Y+  H NHP E + EA  A  RLA AGI L +Q+
Sbjct: 190 SRVPCTLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQT 248

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+NDD   +  LMR  + +R+KPYYL   DL+ GT HFR  +E+G  I+  L    
Sbjct: 249 VLLKGVNDDAATIKELMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHT 308

Query: 302 SGLCQPFYILDLPGGYGKVKI--DTHNIKKVGNGSY 335
           SGL  P   LD PGG GK+ +  D H + K G  ++
Sbjct: 309 SGLATPTLALDAPGGMGKIPLTPDYHQVLKAGKLTF 344


>gi|188996732|ref|YP_001930983.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium
           sp. YO3AOP1]
 gi|188931799|gb|ACD66429.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium
           sp. YO3AOP1]
          Length = 374

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 120/324 (37%), Positives = 186/324 (57%), Gaps = 6/324 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++T TS  +L     IK E+  +  +IS  +    TP   +LINP++ NDPI +Q 
Sbjct: 28  WQIANRT-TSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQI 84

Query: 61  IPQKEELNILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           +P  +E++   +E    DP  ++  SP+ G+ HRYPDR+L +  + C VYCR C R+ M 
Sbjct: 85  LPDIKEIDEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMF 144

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
              +    + ++ +A   YI+    I EV+ +GGDPL L +K+++ +LK L  I H+ ++
Sbjct: 145 LEDE-RARTKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVI 203

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  SR  + +P R   E +  L E    V++  H NHP E + E   A+  + + G  +L
Sbjct: 204 RIGSRELVANPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVL 263

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKGIND  E + NLMR  ++ +IKPYYL   D   G  HFR  +E G +I+  L+
Sbjct: 264 NQTVLLKGINDSKETIENLMRDLLKAKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLR 323

Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
            ++SGL  P + +DL GG GKV +
Sbjct: 324 GRLSGLGIPTFAVDLLGGLGKVPV 347


>gi|307322539|ref|ZP_07601885.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
           AK83]
 gi|306891821|gb|EFN22661.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
           AK83]
          Length = 377

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 119/340 (35%), Positives = 188/340 (55%), Gaps = 18/340 (5%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           ++T+ ++L     +  E+ +   ++S  Y   +TP   +LIN  + NDP+  Q +P   E
Sbjct: 22  SVTTIEELKLYVNVSPEEEEAFHQVSERYGFRVTPYYLSLINKEDRNDPVRLQAVPDIRE 81

Query: 67  LNIL------------PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           L  L              + E+P+     + +  IVHRYPDR+L  L + C  YCR C R
Sbjct: 82  LQDLFHVEQLPSFHRSAVDSENPLWKEGRTDVGCIVHRYPDRVLFHLTNFCATYCRHCSR 141

Query: 115 REMVGSQKGTVLSSK-DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
           +   G  +G++ + +   +  +AYI E+ +I +V+ +GGDPL L   +L+ VL  LR + 
Sbjct: 142 KVHAG--QGSIATDRTQIDEGIAYIAERPEIRDVLLSGGDPLTLPDSKLEYVLSRLRQLP 199

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
           HVQI+R  +R P+  PQRI  E  + +K+   P++I  H NHP E + EA  AI RL  A
Sbjct: 200 HVQIIRIGTRTPVTMPQRITSEFCRMVKKY-HPIWINTHFNHPNEITPEAKTAIERLLEA 258

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           G+ + +QSVLLKGIND  E++  L+   +  R++PYYL+H DL  G  HFR +I+ G  I
Sbjct: 259 GVPVGNQSVLLKGINDTVEVMKELVHQLLIARVRPYYLYHADLVRGAEHFRTSIDVGMHI 318

Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
           + +L+   +G   P Y++  P   GK  ++ + +   G G
Sbjct: 319 IENLRGHTTGFAVPQYVICTP--LGKTPLNPNYVIATGPG 356


>gi|169831230|ref|YP_001717212.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638074|gb|ACA59580.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 419

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/352 (36%), Positives = 186/352 (52%), Gaps = 12/352 (3%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R K +T+ + L     + ++ I +I ++S  Y  A++P  A ++       PI  Q 
Sbjct: 73  WQMR-KRITTVEVLARFMELNRDDIHDIDKVSRQYRWAVSPYYAAVMAVGGVKGPIWAQA 131

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E+        DP+ +   SP+ GI  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 132 VPSTAEITD-ARGTTDPMAERLTSPVPGITRRYPDRLIINVTNQCAMYCRHCQRRRNIGE 190

Query: 121 ----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
               Q   VL     EAAL YI+E  +I +V+ TGGD L+LS   L  +L  L  I HV+
Sbjct: 191 VDRHQPRRVL-----EAALQYIRENPEIRDVLITGGDALLLSDTVLDWLLGELHSIPHVE 245

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           I R  +R  +  PQRI   L   L E   P+YI    NHP E + EA+ A  RL  AG++
Sbjct: 246 IKRLGTRALVTLPQRITAGLCAVL-ERYPPIYINSQFNHPLEVTPEAVQACDRLVRAGVV 304

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           L +Q+VLLKGIN+DP ++  L    +  R++PYY+ H     GTSHF   +EEG  I+  
Sbjct: 305 LGNQAVLLKGINNDPHVMKKLNHELLRARVRPYYIFHAKPVRGTSHFITPVEEGLAIMEQ 364

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           L+   SGL  P YI++ PGGYGK  +    +    +    +    N V  YP
Sbjct: 365 LRGYTSGLAVPTYIINAPGGYGKTPVTPSYVVDHNDQRLVLRTWENRVLPYP 416


>gi|302340146|ref|YP_003805352.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
           DSM 11293]
 gi|301637331|gb|ADK82758.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
           DSM 11293]
          Length = 374

 Score =  216 bits (550), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 122/310 (39%), Positives = 175/310 (56%), Gaps = 15/310 (4%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P  P+ RQ IP+KEE + L  E  DP+ +  +SPL  ++HRY DR L      C +YCR
Sbjct: 65  DPASPLRRQAIPRKEEFHFLSYESADPLCEQEYSPLPRLIHRYEDRALFLASDRCALYCR 124

Query: 111 FCFRREMVGSQ---KGTVLSSKDTEA-------ALAYIQEKSQIWEVIFTGGDPLILSHK 160
            CFRR   G        V + KD  +       A  Y++++ +I E++ +GGDPL+L   
Sbjct: 125 HCFRRHFTGGAGQGDREVKNRKDRRSLFEAAQDAACYLEKRPEIRELLLSGGDPLMLPDG 184

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANHPYE 218
            L +++   R  +   ILR  +R+P V P RI P L    +E G+  P+++    NHP E
Sbjct: 185 TLFRLIDLFRKHRPDLILRIGTRMPAVLPSRITPVLA---RELGRRAPLFVVCQFNHPDE 241

Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
            S  A+ A++RLA++GI +L+QSVLL+G+NDD E L  L    +  R+ PYYL   DLAA
Sbjct: 242 VSPPAVEALARLADSGIPILNQSVLLRGVNDDRETLKVLSGALLAARVIPYYLFQGDLAA 301

Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           GTSH R  I +G  I+ SL++ +SGL  P Y +DLPGG GKV I    + +V      + 
Sbjct: 302 GTSHLRAPILKGVSIMRSLRQCMSGLATPVYAVDLPGGGGKVSIPLDPVPRVEEREALLP 361

Query: 339 DHHNIVHDYP 348
              N +  YP
Sbjct: 362 GPDNRLWPYP 371


>gi|42524711|ref|NP_970091.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100]
 gi|39576921|emb|CAE78150.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100]
          Length = 428

 Score =  215 bits (548), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 116/320 (36%), Positives = 185/320 (57%), Gaps = 4/320 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLRH +L +  D      +  ++          +++  TP  A+L    +    I +  
Sbjct: 53  WQLRH-SLKTQDDFAQHFELSADEKAAFVGGKELFNVRTTPYYASLAKG-DAGQSIRQIL 110

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P + E+    ++  DP+G+  +     ++HRY DR+L  +  +C VYCRFC R+   G 
Sbjct: 111 MPHRFEIEEGDQQMLDPLGERQNKAAPRLIHRYSDRVLFLITDICSVYCRFCTRKHFTG- 169

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q+   + +++ E AL+YI+  + I EVI +GGDPL +S K+L +VL  LR I+HV+I+R 
Sbjct: 170 QEQAFIRNEEYEQALSYIRSHTGIREVILSGGDPLTVSDKQLDRVLGDLRAIEHVEIIRI 229

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR+P+V P R+  +L+Q LK+  KPV++  H NHP E + EA+ A+ RL + G+ +++Q
Sbjct: 230 GSRMPVVCPMRVTEDLVQILKKH-KPVFLMSHFNHPDELTAEAVEALERLVDNGVPVMNQ 288

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL GIN+ P ++  L R  + LR+KPYY+   D + GT H R ++E+  +I   L   
Sbjct: 289 MVLLNGINNHPALVQALNRRLLFLRVKPYYMFQCDPSLGTDHLRTSVEDSLEIQKELWGH 348

Query: 301 ISGLCQPFYILDLPGGYGKV 320
           +SGL  P   LD+P G GK 
Sbjct: 349 LSGLAMPNLSLDIPNGGGKT 368


>gi|268323533|emb|CBH37121.1| putative L-lysine 2,3-aminomutase [uncultured archaeon]
          Length = 515

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/296 (39%), Positives = 176/296 (59%), Gaps = 12/296 (4%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE---DPIGDNNHSPL 86
           +++  Y + + P   +LI      D I +Q +P   EL    E+ E   DP+ +   SP+
Sbjct: 34  KVTRKYPMRINPYYLSLIKERE--DAIWKQSMPDIMEL----EDEEGVPDPLHEEKDSPV 87

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
            G+VHRYPDR+LL + + C +YCRFC R+  VG     +   +     + YI+E+ +I +
Sbjct: 88  SGLVHRYPDRVLLLVSNRCAMYCRFCTRKRRVGDPFKRI-KKEQVLQGIEYIREREEIRD 146

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           V+ +GGDPL+L+   L   L+ L+ IKHV++LR  +RVP   PQRI   L+  L+    P
Sbjct: 147 VLISGGDPLLLNDDELAFFLERLKKIKHVEVLRIGTRVPCALPQRITDALLSLLRRY-HP 205

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
           +YI  H NHP EF+EE+  A S +A+AGI L  Q+VLLKG+ND  +++  L+R    +R+
Sbjct: 206 LYINTHFNHPGEFTEESRKACSMIADAGIPLGDQTVLLKGVNDSVDVMNALIRGLWSMRV 265

Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            PYY++  DL  GT HFR  ++EG +I   LK   S L  P +++D PGG GK+ I
Sbjct: 266 TPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPHFVIDAPGGGGKIPI 320



 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 11/106 (10%)

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           P+YI +H  HP E +E+    +S  ++AG+ L  +  L++G+NDDP ++  L+   ++LR
Sbjct: 387 PIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPRVIKELVHGLLKLR 446

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
           +KPYYLH             + EEG  I+ SL+   SG+  P  I+
Sbjct: 447 VKPYYLHAD-----------SEEEGLTIINSLRGFTSGMAVPHLIV 481


>gi|323701829|ref|ZP_08113499.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           nigrificans DSM 574]
 gi|323533133|gb|EGB23002.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           nigrificans DSM 574]
          Length = 422

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 175/306 (57%), Gaps = 9/306 (2%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER---ED 76
           +  E ++ I ++  HY  A++P    L+       PI +Q IP  +E+    E+    ED
Sbjct: 92  LSAEDMNLIDQVGQHYRWAVSPYYLALVIISGLTGPIGKQAIPSIKEI----EDHSGVED 147

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           P+G+   SP   I  RYPDR+++ + + C +YCR C RR  +G +       K  +AAL 
Sbjct: 148 PMGEEFTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRRNIG-EVDVHKPRKVLQAALD 206

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
           YI+E  +I +V+ TGGD L+L  K++  +L  L  I HV+I R  +R P+  PQRI P L
Sbjct: 207 YIRENEEIRDVLITGGDALLLPDKQIDWLLTELDRIPHVEIKRIGTRTPVTMPQRITPTL 266

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
              L E   P+YI    NHP E + EA  A  RL  AG++L +Q+VLLK IN+ P+++  
Sbjct: 267 CAIL-EKHPPIYINTQFNHPLEVTPEAKTACDRLVKAGVVLGNQAVLLKDINNHPDVMKR 325

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L ++ +++R++PYY+ H     GT HF  ++EEG  I+  L+   SGL  P YI++ P G
Sbjct: 326 LNQSLLQIRVRPYYIFHAKNVKGTGHFITSVEEGIAIMDQLRGYTSGLAVPTYIINAPNG 385

Query: 317 YGKVKI 322
           YGK  I
Sbjct: 386 YGKTPI 391


>gi|298571349|gb|ADI87692.1| L-lysine 2,3-aminomutase [uncultured Nitrospirae bacterium MY2-3C]
          Length = 419

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 116/317 (36%), Positives = 179/317 (56%), Gaps = 4/317 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +L S Q L     ++  ++   +E++  Y   +TP   +LI+  NPNDPI RQ IP   E
Sbjct: 40  SLRSVQALGELLNLQPHEVARYQELTRRYHYRITPYYLSLIDFTNPNDPIRRQGIPDLSE 99

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+       DP+ +   S + G+VHRYPDR L  +   C +YCR C R+ M    +G   
Sbjct: 100 LDFQRVGYSDPLEEEEDSQVPGLVHRYPDRALAIVTSKCAMYCRHCTRKRMW--HEGESF 157

Query: 127 SSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            S+D   A + YI+ +  I EVI +GGDPL ++ + L   L  LR I  +++LR  +R+P
Sbjct: 158 RSRDELTAMIDYIRGEVGIREVIVSGGDPLTMNLQLLDWFLGELRAIPRLEVLRIGTRLP 217

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P  I  EL+Q L    +P+++    NHP E +  +I A  R+  AGI + +QSVLL+
Sbjct: 218 VVLPMAITDELVQMLARH-RPLWLNTQFNHPNELTPASIEACDRILRAGIPVSNQSVLLR 276

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND  E++ +L      + ++PYYL   D  +G  HFR +I +G +I+  ++    GLC
Sbjct: 277 GVNDSVEVMKDLCHALQRVMVRPYYLFQCDPVSGAEHFRTSIWKGIEIIEMMRGHTGGLC 336

Query: 306 QPFYILDLPGGYGKVKI 322
            P +++D PGG GKV +
Sbjct: 337 IPTFVVDAPGGGGKVPL 353


>gi|297617606|ref|YP_003702765.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145443|gb|ADI02200.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 417

 Score =  214 bits (545), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 111/295 (37%), Positives = 172/295 (58%), Gaps = 4/295 (1%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           I ++   Y  A++P   +L+     N+P+  Q +P   EL  LP+   DP+ +   SP  
Sbjct: 97  ITKVGRTYRWAVSPYYLSLVGDDYLNNPVYLQAVPDPREL--LPKGELDPMDEAGTSPAP 154

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
            I  RYPDR+++ + + C ++CR C RR  +G       S +D  AAL YI    +I +V
Sbjct: 155 RITRRYPDRLIINVTNQCAMFCRHCQRRRNIGEIDQHA-SREDVRAALHYISGNPEIRDV 213

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           + TGGD L+LS + L  +L  L  I HV+I R  +R+P+  PQR+ PEL + + +   P+
Sbjct: 214 LITGGDALLLSDRTLDWILTELDRIPHVEIKRIGTRIPVTLPQRVTPELCEVISKH-PPI 272

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           Y+    NHP E + EA  A   L  AG +L +Q+VLL+GIND P ++  L    + +R++
Sbjct: 273 YVNTQFNHPLEVTPEAKQACDMLVQAGAVLGNQAVLLRGINDCPVVMKKLNHELLRIRVR 332

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           PYY+ HP    GTSH  ++IE+G +I+ +L+   SGL  P YI++ PGG+GK+ +
Sbjct: 333 PYYIFHPKAVRGTSHRWVSIEKGLEIMEALRGHTSGLAVPTYIINAPGGFGKIPL 387


>gi|218780437|ref|YP_002431755.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761821|gb|ACL04287.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 353

 Score =  214 bits (544), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 118/291 (40%), Positives = 174/291 (59%), Gaps = 6/291 (2%)

Query: 32  SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
           +  Y + +T    +LI   N  DPIARQ IP  EEL+       DP+ + + SP+ G++H
Sbjct: 42  AETYPMRITKYFLSLIREQN--DPIARQVIPSAEELSDA-SLSPDPLCEEDQSPVPGLIH 98

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           RYP  +L ++ + C VYCR C R+  VG  K   ++++     + YI+   +I EV+ +G
Sbjct: 99  RYPHHVLFQVENRCAVYCRHCLRKRKVGGVKP--VTAEALAQGVDYIRSNQEIREVVLSG 156

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           GDPL++   +L  +L+ LR I HV+ LR HSR+P V PQRI PEL + L +   P+Y+ I
Sbjct: 157 GDPLVMEDDKLLDLLRRLRAINHVRTLRVHSRIPGVLPQRITPELAKGLADF-HPLYMNI 215

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
             NHP E + E+  A   LA+ G+ L  Q+VLLKG+NDD  +L  LM   + +R++PYYL
Sbjct: 216 QFNHPREITPESEEACRILADQGVPLGCQTVLLKGVNDDEAVLRELMEELLRIRVRPYYL 275

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           H  D   G +HF + I  G K++ +L+  I G   P Y++DLPGG GK  +
Sbjct: 276 HQLDRVKGAAHFHVPISRGVKLMQALRGSIPGTAIPHYVVDLPGGGGKAPL 326


>gi|134299994|ref|YP_001113490.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           reducens MI-1]
 gi|134052694|gb|ABO50665.1| glutamate 2,3-aminomutase [Desulfotomaculum reducens MI-1]
          Length = 422

 Score =  214 bits (544), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 113/300 (37%), Positives = 175/300 (58%), Gaps = 9/300 (3%)

Query: 26  DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER---EDPIGDNN 82
           + I+++   Y  A++P    L        P+  Q IP  EE+    ++R   EDP+G+  
Sbjct: 98  EAIEKVGRQYRWAVSPYYMALAMVSGSGGPVWLQAIPCIEEV----KDRYGVEDPMGEEY 153

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
            SP++G+  RYPDR+++ + + C +YCR C RR  +G +     S K  E AL YI+E  
Sbjct: 154 TSPVEGVTRRYPDRLIINVTNQCAMYCRHCQRRRNIG-EIDVHKSRKVLEGALQYIRENK 212

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           +I +V+ TGGD L+LS ++++ +L  L  I HV+I R  +R P+  PQRI PEL + L E
Sbjct: 213 EIRDVLITGGDALLLSDRQIEWLLTELDNIPHVEIKRLGTRTPVTMPQRITPELCKIL-E 271

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
              P+YI    NHP E + EA  A   L  AG++L +Q+VLLK IN+ P+++  L ++ +
Sbjct: 272 NHPPIYINTQFNHPLEVTPEAKKACDMLVKAGVVLGNQAVLLKNINNQPDVMKRLNQSLL 331

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            +R++PYY+ H     GT HF   +++G  I+  L+   SGL  P YI++ P GYGK  +
Sbjct: 332 TIRVRPYYIFHAKAVKGTRHFITGVDDGIAIMEQLRGYTSGLAVPTYIINAPNGYGKTPV 391


>gi|310778246|ref|YP_003966579.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926]
 gi|309747569|gb|ADO82231.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926]
          Length = 418

 Score =  214 bits (544), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/331 (37%), Positives = 182/331 (54%), Gaps = 4/331 (1%)

Query: 17  ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED 76
            NL +KE+ +EIK +   Y  A++P  A LI+P N  D I    +P   E    PE   D
Sbjct: 80  VNLTEKEK-EEIKNVGATYRWAISPYYAALIDPENKYDSIRLLSVPTGSEA-AHPEGEVD 137

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           P+G+   +P   I  RYPDR+++   + C +YCR C RR  +G +  T  S      ++ 
Sbjct: 138 PMGEEFTNPAGSITRRYPDRLIINTTNECAMYCRHCQRRRNIG-ETDTHKSDAVIMESID 196

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
           YI+   +I +V+ TGGD L LS KRL+ +LK L+ I HV  +R  +R  +  PQRI  EL
Sbjct: 197 YIRNNPEIRDVLLTGGDVLCLSDKRLEWILKELKSIPHVDYIRLGTRTLVTMPQRITDEL 256

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
           +  LK+  +P+YI  H NHP E + E   A  +LAN GI L +Q+VLL GIN+D  ++  
Sbjct: 257 VDMLKKY-QPIYINTHFNHPKEITPEVKEACDKLANGGISLGNQAVLLNGINNDKYVMRL 315

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L    +++R++PYY+ H     GT HF  ++++G +I+  L+   SG+  P YI++ P G
Sbjct: 316 LNHEMLKIRVRPYYIFHAKHVKGTLHFNTSVDDGIEIMEYLRGYTSGMAIPTYIINAPKG 375

Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            GK  I    +      S  I     +V DY
Sbjct: 376 QGKTPIMPQYLLSRSKNSVKIRTWEGVVIDY 406


>gi|260893262|ref|YP_003239359.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4]
 gi|260865403|gb|ACX52509.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4]
          Length = 427

 Score =  213 bits (542), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/345 (35%), Positives = 193/345 (55%), Gaps = 12/345 (3%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TS + L     + +E+ + I+++   Y  A++P   +L+   +P+ PI RQ +P   EL
Sbjct: 80  ITSVEVLEKLIPLTQEEKEAIRQVERVYRWAVSPYYLSLMG-EDPSCPIRRQALPSAAEL 138

Query: 68  NILPEERE----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
                E E    DP+ +   SP  GI  RYPDR+++ + + C +YCR C RR  +G +  
Sbjct: 139 -----EDEVGSLDPMAEEWTSPAPGITRRYPDRLIINVTNRCAMYCRHCQRRRNIG-EVD 192

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
              +  + E AL YI++  +I +V+ TGGD L+LS   L  +L  L  I HV+I R  +R
Sbjct: 193 RDRTRWELEEALEYIRQNKEIRDVLLTGGDALLLSDSVLDWLLTELDRIPHVEIKRIGTR 252

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+  PQRI   L + L +   P+Y+    NHP E ++EA AA  RLA AG++L +Q+VL
Sbjct: 253 VPVTLPQRITDNLCRILAKH-PPIYLNTQFNHPREITKEAKAACDRLAEAGVVLGNQAVL 311

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+N+ P I+  L +  +++R++PYYL    L  GT+HF   IEEG +I+  L+   SG
Sbjct: 312 LRGVNNHPFIMRKLNQELLKIRVRPYYLFQAKLVKGTTHFVTPIEEGIEIMEYLRGYTSG 371

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           L  P YI++ P G GK+ I    +  +      +    N +  YP
Sbjct: 372 LAVPTYIINAPQGLGKIPILPQYLLAIDEDHVVLRTWENKIVRYP 416


>gi|326792528|ref|YP_004310349.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427]
 gi|326543292|gb|ADZ85151.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427]
          Length = 437

 Score =  213 bits (542), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 114/297 (38%), Positives = 174/297 (58%), Gaps = 3/297 (1%)

Query: 27  EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
           +I+     + +A++P   +L++ HN  NDPI +Q  P   ELNI P +  DP+ +   SP
Sbjct: 57  DIERTLAQFPMAISPYYLSLVDIHNYDNDPIFKQCFPSVLELNISPCDMSDPLHEEVDSP 116

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
              I HRYPDR+L  + +VC +YCR C R+  VG    ++ S +     + YI+    I 
Sbjct: 117 APCITHRYPDRVLFHVSNVCGMYCRHCTRKRKVGDLD-SIPSKESLLQGIEYIKNTPVIR 175

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +V+ +GGDP +LS   +  +LK +  I HV+++R  +R P+V P RI  EL+  LK+   
Sbjct: 176 DVLLSGGDPFLLSDTMIDWLLKEITAIDHVEVVRIGTRTPVVLPFRITDELVSILKKYDN 235

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
            +++  H NH  E + EA AA+ +L  AGI L +QSVLLKGIND   I+ +L+   +   
Sbjct: 236 -IWLNTHFNHSREMTTEAGAALKKLKLAGIPLGNQSVLLKGINDCTYIMKDLLHKLILNG 294

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           ++PYYL+  DL+ G  HFR  I  G +I+ +L+   SG   P Y++D PGG GK+ +
Sbjct: 295 VRPYYLYQCDLSEGLEHFRTNIGTGIEIMENLRGHTSGFAIPTYVIDAPGGGGKIPV 351


>gi|114566648|ref|YP_753802.1| lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337583|gb|ABI68431.1| L-lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 422

 Score =  213 bits (542), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/330 (35%), Positives = 180/330 (54%), Gaps = 4/330 (1%)

Query: 24  QIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           ++  IK +S     A++P   +LI+  N    PI +Q +P   E+ I  +  +DP+G+  
Sbjct: 96  EVQTIKRVSKKVRWAISPYYLSLIDFENYAASPIYKQSVPSLHEI-IECKGEDDPMGEEM 154

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
            SP   I  RYPDR+++ + + C +YCR C RR   G       + KD EAAL YI+  S
Sbjct: 155 SSPAPRITRRYPDRLIINVTNQCAMYCRHCQRRRNFGETDNHA-AHKDLEAALQYIKNNS 213

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           +I +V+ TGGD L+LS + L  +L  L  I HV+I R  +R P+  PQRI   L   LK 
Sbjct: 214 EIRDVLITGGDALMLSDRTLDWLLGELDAISHVEIKRIGTRTPVTLPQRITANLCAVLKR 273

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
              P+YI    N P E + EA  A  RL  AG++L +Q+VLLKGIND+  ++  L +  +
Sbjct: 274 H-TPIYINTQFNSPLEVTPEAKQACDRLIEAGVVLGNQAVLLKGINDNVHVMKKLNQELL 332

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           ++R++PYYL       GT+HF   +  G  I+  L+   SGL  P Y+++ PGGYGK  +
Sbjct: 333 KIRVRPYYLFQAKEVKGTTHFISPVNTGLDIMKHLRGYTSGLAIPTYVINAPGGYGKTPV 392

Query: 323 DTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           +   +  +      I+       +YP +++
Sbjct: 393 NPEYVLDINENEVIISTWQGKTFNYPHRNN 422


>gi|29899154|gb|AAP03121.1| arginine aminomutase [Streptomyces griseochromogenes]
          Length = 410

 Score =  213 bits (541), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 165/287 (57%), Gaps = 4/287 (1%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           I E +  Y  ++TP  A+L++P +P  P+ +Q +P   EL        DP+GD  +    
Sbjct: 57  IAETAGKYRWSVTPYYASLMDPDDPGCPVRQQAVPALGELMEFSGAEVDPVGDMYYRRTN 116

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS---SKDTEAALAYIQEKSQI 144
            +VH+YPDR+++ +   CPVYCR C R+       GT       +D    L YI +  +I
Sbjct: 117 RVVHKYPDRVIMLITEACPVYCRHCTRKFHTTDVDGTYFERNEGEDFSEDLRYIADHPEI 176

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            +V+ TGGDPL     +L++++  LR I  V+I+R  SR P++ PQR+ PEL + L    
Sbjct: 177 RDVLLTGGDPLSYRDGKLEEIIAGLRAIPSVEIIRIGSRFPVLLPQRVTPELCEMLARY- 235

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
            PV++  H NHP E + E+  AI RL   GI + +Q+VLL+GINDD   +  LM   + +
Sbjct: 236 HPVWLNTHFNHPKEITPESERAIDRLLRHGIPVGNQTVLLRGINDDLGTMRRLMTELLRI 295

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
           R++PYYL+H D   G SHF  ++E+G +I+  L+  I+G   P Y+L
Sbjct: 296 RVRPYYLYHCDNVTGVSHFMTSVEKGWEIMEGLQGHITGFGVPQYVL 342


>gi|325290800|ref|YP_004266981.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271]
 gi|324966201|gb|ADY56980.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271]
          Length = 416

 Score =  213 bits (541), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 121/320 (37%), Positives = 186/320 (58%), Gaps = 4/320 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+H+ +T  + L     +   Q  EI ++   Y  A++P   +L +  NP DP+  Q 
Sbjct: 71  WQLKHR-ITDVETLDGIVGLSAVQKKEISKVGRVYRWAISPYYLSLADFSNPLDPVLMQG 129

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL     E EDP+ +   SP   I  RYPDR+++ + ++C +YCR C RR  +G 
Sbjct: 130 LPTGMELEDDKGE-EDPMAEALTSPAPCITRRYPDRLIINVTNMCGMYCRHCQRRRNIG- 187

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  +  + +D  AALAY++E  +I +V+ TGGD L+LS + L  +L  L  I HV+I R 
Sbjct: 188 EIDSHKNRQDLSAALAYVRENPEIRDVLITGGDALLLSDETLDWLLNELHQIPHVEIKRL 247

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  P RI   L+  L +   P+Y+    NHP E + EA  A+ RL +AG+IL +Q
Sbjct: 248 GTRVPVTLPARITDHLVNILAKY-PPLYLNTQFNHPIEVTLEAKQAVDRLISAGVILGNQ 306

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGIN+ P I+  L +  +++R++PYY+ H     GT HF  +I+EG  ++  L+  
Sbjct: 307 AVLLKGINNHPNIMKKLNQELLKIRVRPYYIFHAKNIKGTKHFIPSIQEGLAVMEHLRGY 366

Query: 301 ISGLCQPFYILDLPGGYGKV 320
            SGL  P YI++ P G GK+
Sbjct: 367 TSGLAVPTYIINAPKGGGKI 386


>gi|225847898|ref|YP_002728061.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643772|gb|ACN98822.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 374

 Score =  213 bits (541), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 113/318 (35%), Positives = 178/318 (55%), Gaps = 3/318 (0%)

Query: 26  DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGDNNH 83
           D  K++S  Y    TP    L +  N  DPI +Q +P ++E++   +E    DP  ++  
Sbjct: 50  DVFKKVSQIYHFGTTPYYIFLADRTNLEDPILKQILPDEKEIDEKYQEGAFLDPFLEDEK 109

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           SP+ G+ HRYPDR+L +  + C VYCR C R+ M    +    + ++ +    YI+    
Sbjct: 110 SPVLGLTHRYPDRVLFRATNFCSVYCRHCMRKRMFLEDE-RARTKQEYDVMFEYIKSNKA 168

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I EV+ +GGDPL L +++++ ++K L  I HV I+R  SR  + +P R   E +  + E 
Sbjct: 169 IKEVLVSGGDPLTLPNQKIEYIIKNLYEIDHVDIIRIGSRELVSNPFRFYDEELLEIFEK 228

Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
              V+I  H NHP E + E   A+  + + G  +L+Q+VLLKGINDD   + NLMR+ ++
Sbjct: 229 YDKVWIVTHFNHPNEITSETKKAVKNILSTGTPVLNQTVLLKGINDDKYTMENLMRSLLK 288

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++IKPYYL H D   G  HF+  IE+G +I+  L+ ++SGL  P + +DL  G GKV + 
Sbjct: 289 VKIKPYYLFHCDPTKGVYHFKTGIEKGLEIMEHLRGRVSGLGNPTFAVDLVNGLGKVPLL 348

Query: 324 THNIKKVGNGSYCITDHH 341
              +    NG Y   ++ 
Sbjct: 349 PEYLISKKNGFYEFKNYQ 366


>gi|52549348|gb|AAU83197.1| lysine 23-aminomutase [uncultured archaeon GZfos27A8]
          Length = 437

 Score =  213 bits (541), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 111/295 (37%), Positives = 179/295 (60%), Gaps = 3/295 (1%)

Query: 29  KEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           +++   + +++TP   +LI+  +  NDPI  Q  P   EL I   + +D + ++  SP+ 
Sbjct: 58  EKVLEKFPLSITPYYLSLIDYDDYKNDPIFIQAFPDPRELVISKYDIKDSLAEDKDSPVP 117

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           GI HRYPDR+L  + ++C +YCR C R+  VG    ++ +  +    + YI+   +I +V
Sbjct: 118 GITHRYPDRVLFLISNICSMYCRHCTRKRRVGDVD-SIPNRSEILKGIEYIKNTPEIRDV 176

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           + +GGDPL+LS   L  +L  L+ I HV+++R  +RVP V P RI  +L+  LK+   P+
Sbjct: 177 LLSGGDPLMLSDSYLDWILTELQTIPHVEVIRIGTRVPAVLPYRITDDLVNMLKKH-HPL 235

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           +I    NHP E +  +  A+  LA+AGI L +QSVLL G+ND P ++  L++  V+ R++
Sbjct: 236 WINTQFNHPREVTTSSREALRMLADAGIPLGNQSVLLAGVNDCPILMKRLVQRLVQNRVR 295

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           PYYL+  DL+ G +HFR  + +G +I+ SL    SG   P Y++D PGG GK++I
Sbjct: 296 PYYLYQCDLSEGLTHFRTPVGKGIEIIESLIGHTSGFAVPSYVIDAPGGGGKIRI 350


>gi|268323654|emb|CBH37242.1| hypothetical protein, radical SAM family [uncultured archaeon]
          Length = 515

 Score =  212 bits (539), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 118/296 (39%), Positives = 175/296 (59%), Gaps = 12/296 (4%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE---DPIGDNNHSPL 86
           +++  Y + + P   +LI      D I +Q +P   EL    E+ E   DP+ ++  SP+
Sbjct: 34  KVTRKYPMRINPYYLSLIKERE--DAIWKQSMPDIMEL----EDEEGVPDPLHEDKDSPV 87

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
            G+VHRYPDR+LL + + C +YCRFC R+  VG     +   +     + YI+E   I +
Sbjct: 88  SGLVHRYPDRVLLLVSNRCAMYCRFCTRKRKVGDPFKRI-KKEQVLQGIEYIREHEAIRD 146

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           V+ +GGDPL+L+ + L   L+ L+ IKHV +LR  +RVP   PQRI   L+  L+    P
Sbjct: 147 VLISGGDPLLLNDEELAFFLERLKEIKHVDVLRIGTRVPCALPQRITDGLLSLLRRY-HP 205

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
           +YI  H NHP EF+EE+  A S +A+AGI L  Q+VLLKG+ND  +++  L+R    +R+
Sbjct: 206 LYINTHFNHPGEFTEESRRACSMIADAGIPLGDQTVLLKGVNDSVDVMNALIRGLWSMRV 265

Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            PYY++  DL  GT HFR  ++EG +I   LK   S L  P +++D PGG GK+ I
Sbjct: 266 TPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPHFVIDAPGGGGKIPI 320



 Score = 72.8 bits (177), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 11/106 (10%)

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           P+YI +H  HP E +E+    +S  ++AG+ L  +  L++G+NDDP+++  L+   ++LR
Sbjct: 387 PIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPKVIKELVHGLLKLR 446

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
           +KPYYLH             + EEG  I+ SL+   SG+  P  I+
Sbjct: 447 VKPYYLHAD-----------SEEEGLTIINSLRGFTSGMAVPHLIV 481


>gi|327538979|gb|EGF25616.1| KamA family protein [Rhodopirellula baltica WH47]
          Length = 381

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 102/280 (36%), Positives = 165/280 (58%), Gaps = 2/280 (0%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A  + P +PNDP+ RQ +P  EE N       DP+GD + +   G++H+Y  R L    
Sbjct: 104 FAARMKPGDPNDPLLRQVLPLPEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITT 163

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C ++CR+CFRRE   S+  +       E AL Y++E   I EV+ +GGDPL L+   +
Sbjct: 164 GACGIHCRYCFRREFPYSENSS--RGDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSV 221

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
            K+++ +  I HV+ LR+H+R+PIV P R+    I+ ++ +    ++ +H NHP E   E
Sbjct: 222 AKLMQQIESIPHVRRLRWHTRMPIVIPSRVTDAWIERMQASRLTSWVVVHCNHPAELDSE 281

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
             AA+ RL +AGI +L+Q+VLL+G+NDD ++L +L R  ++LR+ PYYLH  D   G +H
Sbjct: 282 TGAALMRLVDAGIPVLNQAVLLRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAH 341

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           F +  E G+ +V+ L+ ++ G   P ++ +  G   K ++
Sbjct: 342 FEVDQECGRALVSQLESRLPGFAVPRFVCEQAGQASKTRL 381


>gi|327398266|ref|YP_004339135.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411]
 gi|327180895|gb|AEA33076.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411]
          Length = 304

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/278 (40%), Positives = 168/278 (60%), Gaps = 9/278 (3%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           I  QF   K EL       +DP+G+  HS  KG++HRY DR++L + + C  YCRFCFR+
Sbjct: 18  IKSQFCFSKGEL--FLNGNKDPLGEKKHSKAKGLIHRYTDRVVLTVTNKCFAYCRFCFRK 75

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
               S +G  L     E ++ Y+++   + EV+ +GGDP  LS+K+L ++L  +R IKH+
Sbjct: 76  NNWQSFEGFSL-----EESVNYLKKTKNVREVLISGGDPFFLSNKKLAEILTAIRSIKHI 130

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
             +R  SRV    P RI+ +  + LK   KP++IA H NHP E ++E   +   L ++GI
Sbjct: 131 STIRIGSRVLSSLPIRIDNQTAEMLK-LFKPIWIAAHINHPDEITDEFKKSARLLLDSGI 189

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
            ++SQ+VLLK IND+   L  L  + V++ IKPYYL   D A G   FR++I++   ++ 
Sbjct: 190 PIVSQTVLLKNINDNETTLKKLFCSLVDIGIKPYYLFGCDQAVGNGIFRVSIDKALSLME 249

Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHN-IKKVGN 332
            L+ KISGLC P +  DLP GYGKV ++ +  IK+ GN
Sbjct: 250 KLRGKISGLCMPTFSFDLPSGYGKVTLEPNRIIKRNGN 287


>gi|183221183|ref|YP_001839179.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911274|ref|YP_001962829.1| lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775950|gb|ABZ94251.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779605|gb|ABZ97903.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 402

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 111/292 (38%), Positives = 170/292 (58%), Gaps = 4/292 (1%)

Query: 37  IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           ++ TP   +L +P +PN PI R  +P KEE     EE  DP+ +   SP++G+ H YP+R
Sbjct: 61  VSTTPYYLSLSDPSDPNCPIRRMIVPTKEEAIFSLEESADPLEEERLSPVRGLTHMYPNR 120

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +LL   H C VYCR C R   V S +  +  S D E+A  YI+   +I +V+ +GGDPL 
Sbjct: 121 VLLFSNHSCSVYCRHCMRGRKVSSNEERMEKS-DLESAFDYIRNHPEIEDVVVSGGDPLN 179

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIHA 213
           L+  R++ +LK L  I HV+I R  +R P+  P RI   + Q +++       ++     
Sbjct: 180 LADLRIEWILKELNQIPHVKICRLGTRNPVTLPFRITDAICQIIEKYNDDNLSIFCNTQF 239

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E ++E   AI +L   G+ + +Q+VLLKGINDD E +  L +  +E+R++ YYL+ 
Sbjct: 240 NHPKECTKETKEAILKLLKVGVSVGNQAVLLKGINDDEETMLTLHKKLLEMRVRAYYLYD 299

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           P+L  G+  FR  +  G +IV  ++ KI G+  P ++ DLPGG GK+ I  +
Sbjct: 300 PELIPGSRGFRTPLARGIEIVEYMRGKIGGMGIPQFVNDLPGGGGKITIGAN 351


>gi|85858714|ref|YP_460916.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
 gi|85721805|gb|ABC76748.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
          Length = 339

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 114/328 (34%), Positives = 180/328 (54%), Gaps = 9/328 (2%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQI--DEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
           Q+R++  +  Q    A L+K+  I    ++ +   Y  ++TP   +LI   +P+DPI  Q
Sbjct: 12  QVRNRIRSGRQ---LAELLKEAPIAAGSLRAVIRTYPFSITPYYFSLIREGDPDDPIRFQ 68

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E++      +DP+ ++   P+ G++HRY DR L+     C +YCR C R+    
Sbjct: 69  CVPDPREVSFSLGGVDDPLEESRDMPVPGLIHRYADRCLIMATSKCMMYCRHCNRKR--- 125

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             K          A + Y+     I EVI +GGDPL L  K L + L  LR I HV++LR
Sbjct: 126 RWKAGAADRAPLRAMIDYVAATPGIREVIVSGGDPLTLPEKVLDEFLGALRAIPHVEVLR 185

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             SR+P+V P RI   L++ L++  +P++     N P E + E+  A  RL +AGI + +
Sbjct: 186 IGSRIPVVLPMRITVPLVRILRKH-RPLWFNTQFNSPREITPESAEACERLVDAGIPVSN 244

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLKGINDD E +  L+     + ++PYYL   D   G  HFR+   +G +++  +  
Sbjct: 245 QSVLLKGINDDYETMRRLLYGLQRISVRPYYLFQCDPVRGADHFRVDFWKGMEMMERISR 304

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNI 327
           + SGLC P Y++D+PGG GK+ + T ++
Sbjct: 305 QTSGLCLPRYVIDVPGGKGKMSLQTFSL 332


>gi|332297913|ref|YP_004439835.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense
           DSM 12168]
 gi|332181016|gb|AEE16704.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense
           DSM 12168]
          Length = 357

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/309 (37%), Positives = 178/309 (57%), Gaps = 14/309 (4%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P   + RQ++P  EE N+LP E  DP+G + +     +VH+Y +R+LL     C  YCR
Sbjct: 47  SPFYALRRQYVPSIEEKNVLPCELSDPLGAHRYQITPRLVHQYKNRVLLLTTARCFAYCR 106

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
            CFRR     ++G +  ++  EA  AY+    ++ E++F+GGDPL  S+  L+++++ +R
Sbjct: 107 HCFRRTYTSRKQGFITDAECGEAC-AYLSSHPEVQEILFSGGDPLTASNDALRQLIRRVR 165

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE----FSEEAIAA 226
             +   ++R  +R PI +P+R + ELI   KE   P+++  H NHP E    FS E+  A
Sbjct: 166 RARPGILIRICTRAPIAEPERFDSELIALFKE-NAPLWVIPHVNHPAEISNRFSPESYRA 224

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           +S L +AGI + SQ+VLL+G+ND   +LA L      + IKP YL   DLA GTSH R+ 
Sbjct: 225 LSGLVSAGIPVQSQTVLLRGVNDSVPVLAQLFHELTCMGIKPGYLFQGDLAPGTSHLRVP 284

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV---KIDTH----NIKKVGNGSYCITD 339
           I EG K+   L+ ++SGL  P Y +DLPGG GK+   ++D       + + GN  Y  TD
Sbjct: 285 IREGVKLYERLRGELSGLSTPVYAVDLPGGGGKINLLQLDPELLRTGVSQNGN-DYLFTD 343

Query: 340 HHNIVHDYP 348
            +     YP
Sbjct: 344 ANGNGWTYP 352


>gi|83589322|ref|YP_429331.1| L-lysine 2,3-aminomutase [Moorella thermoacetica ATCC 39073]
 gi|83572236|gb|ABC18788.1| glutamate 2,3-aminomutase [Moorella thermoacetica ATCC 39073]
          Length = 415

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/326 (36%), Positives = 185/326 (56%), Gaps = 13/326 (3%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H+ +TS   L     + + + + I ++   Y  A++P   +L+ P  P+ PI RQ 
Sbjct: 64  WQLTHR-ITSVATLAELIPLTEAEKEAILKVERTYRWAVSPYYLSLMGPE-PDCPIRRQA 121

Query: 61  IPQKEEL----NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
           +P   EL     +L     DP+ +   SP   I  RYPDR+++ + + C +YCR C RR 
Sbjct: 122 LPSAAELEDNHGVL-----DPMDEELTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRR 176

Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
            +G    +  S ++ E AL YI++  +I +V+ TGGD L+LS   +  +L  L  I HV+
Sbjct: 177 NIGEVDRS-RSRRELEQALQYIRQNEEIRDVLITGGDALMLSDAMIDWLLTELDNIPHVE 235

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           I R  +RVP+  PQRI PEL + L +   P+Y+    NHP E +  A  A  RL  AG++
Sbjct: 236 IKRLGTRVPVTMPQRITPELCRVLAK-HPPIYLNTQFNHPREVTAAAKEACDRLVQAGVV 294

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           L +Q+VLLKG+N+ P ++  L +  +++R++PYY+ H     GT+HF  +IEEG +I+  
Sbjct: 295 LGNQAVLLKGVNNHPFVMRKLNQELLKIRVRPYYIFHAKPVKGTTHFITSIEEGVEIMDK 354

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
           L+   SGL  P YI++ P G GK  I
Sbjct: 355 LRGYTSGLAVPTYIINAPHGLGKTPI 380


>gi|296133315|ref|YP_003640562.1| lysine 2,3-aminomutase YodO family protein [Thermincola sp. JR]
 gi|296031893|gb|ADG82661.1| lysine 2,3-aminomutase YodO family protein [Thermincola potens JR]
          Length = 448

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/328 (35%), Positives = 182/328 (55%), Gaps = 3/328 (0%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           ++I++IK++   +  A++P  A+L++  +P+ P+  Q IP   EL +    ++DP+G+  
Sbjct: 111 KEIEDIKKVGQKFRWAISPYYASLMSERDPSCPVRLQAIPSILEL-LDQSGKDDPMGEEF 169

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
            SP   I  RYPDR+++ + + C +YCR C RR  +G        S + +AA+ YI+   
Sbjct: 170 TSPAPCITRRYPDRLIINVTNQCAMYCRHCQRRRNIGEVDRNKPRS-EIKAAIEYIRANP 228

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           +I +V+ TGGD L+LS+  L  +L  L  I HV+I R  +R  +  PQRI P+L + L E
Sbjct: 229 EIRDVLITGGDALLLSNSELDWILTQLDSIPHVEIKRIGTRTLVSMPQRITPQLCEIL-E 287

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
              P+YI    NHP E +     A  +L  AG +L +Q+VLL GIN++  ++  L    +
Sbjct: 288 KHPPLYINTQFNHPKEITPAVAEACDKLIKAGAVLGNQAVLLNGINNNVHVMKKLNHELL 347

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           ++RI+PYY+ H     GTSHF   +EEG KI+  L+   SGL  P YI++ P GYGK  +
Sbjct: 348 KVRIRPYYIFHAKTVTGTSHFITKVEEGIKIMEKLRGYTSGLAVPTYIINAPKGYGKTPM 407

Query: 323 DTHNIKKVGNGSYCITDHHNIVHDYPPK 350
               +   G     I      V  YP K
Sbjct: 408 LPEYLISSGEDEIVIRTWEKKVISYPNK 435


>gi|32471298|ref|NP_864291.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1]
 gi|32443139|emb|CAD71970.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1]
          Length = 381

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 101/280 (36%), Positives = 164/280 (58%), Gaps = 2/280 (0%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A  + P +PNDP+ RQ +P  EE N       DP+GD + +   G++H+Y  R L    
Sbjct: 104 FAARMKPGDPNDPLLRQVLPLPEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITT 163

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C ++CR+CFRRE   S+  +       E AL Y++E   I EV+ +GGDPL L+   +
Sbjct: 164 GACGIHCRYCFRREFPYSENSS--RGDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSV 221

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
            K+++ +  I HV+ LR+H+R+PIV P R+    I  ++ +    ++ +H NHP E   E
Sbjct: 222 AKLMQQIESIPHVRRLRWHTRMPIVIPSRVTDAWIVRMQASRLTSWVVVHCNHPAELDSE 281

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
             AA+ RL +AG+ +L+Q+VLL+G+NDD ++L +L R  ++LR+ PYYLH  D   G +H
Sbjct: 282 TGAALMRLVDAGVPVLNQAVLLRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAH 341

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           F +  E G+ +V+ L+ ++ G   P ++ +  G   K ++
Sbjct: 342 FEVDQECGRALVSQLESRLPGFAVPRFVCEQAGQASKTRL 381


>gi|294496089|ref|YP_003542582.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
 gi|292667088|gb|ADE36937.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
          Length = 437

 Score =  209 bits (531), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 113/304 (37%), Positives = 184/304 (60%), Gaps = 3/304 (0%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPI 78
            K E+ D++K+    + +++TP   +LI+  +  NDPI  Q  P  +EL+I  ++ EDP+
Sbjct: 49  FKAEEKDKLKQTLEKFPLSVTPYYLSLIDTDDFRNDPIFLQAFPSPKELDIDEDDLEDPL 108

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
            ++  SP++GI HRYPDR+L  + + C +YCR C R+  VG    ++ +       L YI
Sbjct: 109 SEDEDSPVEGITHRYPDRVLFHISNTCSMYCRHCTRKRKVGDVD-SIPTRDAVSEGLEYI 167

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           +    + +V+ +GGDP +L    L  +L  LR I HV+I+R  +R+P+V P R+  +L++
Sbjct: 168 RNTPHVRDVLLSGGDPFMLPDAYLDWILTKLREIPHVEIIRIGTRMPVVLPYRVTDDLVE 227

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            LK+   P++I  H NHP E +  +  A+ +LA+AGI L +Q+VLL G+ND   I+ +L+
Sbjct: 228 ILKKH-HPLWINTHFNHPREVTASSREALRKLADAGIPLGNQTVLLSGVNDCHRIMKSLV 286

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
              V+ R++PYYL+  DL+ G SHFR  + +G +I+  L    SG   P Y++D P G G
Sbjct: 287 HKLVQNRVRPYYLYQCDLSEGLSHFRTPVGKGIEIMEHLIGHTSGFAVPTYVIDAPHGGG 346

Query: 319 KVKI 322
           K+ +
Sbjct: 347 KIPV 350


>gi|281355041|ref|ZP_06241535.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis
           ATCC BAA-548]
 gi|281317921|gb|EFB01941.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis
           ATCC BAA-548]
          Length = 341

 Score =  209 bits (531), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 108/298 (36%), Positives = 169/298 (56%), Gaps = 4/298 (1%)

Query: 27  EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
           E++ +   Y + L      LI+P +  NDPIARQ +P  +EL  L     DP+ +    P
Sbjct: 21  EMERVEPTYPVYLNDYYLGLIDPADWRNDPIARQSLPDPQELADL-SSSYDPLAEEEQMP 79

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
              ++HR+ DR++L     C + CRFCFR R      +   LS +    A+ Y+     +
Sbjct: 80  TPHLIHRFVDRVVLLATGRCAMRCRFCFRKRAWTSGMELADLSDEQLAGAVGYLTAHPAV 139

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            EV+ +GGDPL+L   RL+ ++  +  +  +Q++R  SR+P+V P+R+  E+ +      
Sbjct: 140 KEVLISGGDPLMLPFGRLKAIVDAVAAVPSIQVIRIGSRMPVVWPERVTAEIAEYFGSIP 199

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
             ++ A H NHP E + EA AA  RL  AG+ +++QSVLLKG+NDD E+L  L R  V +
Sbjct: 200 G-LWFATHFNHPREVTPEAAAACGRLVRAGVPVVNQSVLLKGVNDDAELLEELFRKLVAI 258

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           R+KP+YL H D   G  HF   +E+G +I+ + + ++S L  P + +DLP G GKV +
Sbjct: 259 RVKPHYLFHVDPVRGVRHFATGVEKGLQILRAFRPRLSSLAVPTFAIDLPEGGGKVAL 316


>gi|116327784|ref|YP_797504.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331557|ref|YP_801275.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120528|gb|ABJ78571.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125246|gb|ABJ76517.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 420

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/290 (37%), Positives = 173/290 (59%), Gaps = 4/290 (1%)

Query: 36  SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95
           +++ TP   +L +P +P+DPI +  IP++ E    PEE  DP+ +   SP+KG+ H YPD
Sbjct: 67  NVSATPYYISLTDPEDPDDPIRKMIIPREAETVFSPEESPDPLHEERLSPVKGLTHMYPD 126

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R+LL   H C VYCR C R   V   K  +++ +D EA   YI+   +I +V+ +GGDPL
Sbjct: 127 RVLLFTNHECSVYCRHCMRGRKVSDSKERMIT-EDLEACFEYIEACPEITDVVLSGGDPL 185

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIH 212
            LS  ++ ++L+ L  I+HV+I R  +R P+  P RI  +L   ++        ++    
Sbjct: 186 NLSDSKIDRILERLEKIEHVKICRLGTRNPVTLPFRITSDLCNIIESHNTHRLSIFCNTQ 245

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
            NH  E + EA  AI +L  AG+ + +Q VLLKGIND  EI+  L +  +ELR++ YY++
Sbjct: 246 FNHAKECTSEAKEAILKLLKAGVNVGNQCVLLKGINDSGEIMLELHKKLLELRVRAYYMY 305

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            P+L  G+  FR  + +G +I++ ++ KI G+  P ++ DLPGG GKV +
Sbjct: 306 DPELIPGSRGFRTPLAKGIEIISYMRGKIGGMGIPQFVNDLPGGGGKVTL 355


>gi|147676951|ref|YP_001211166.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI]
 gi|146273048|dbj|BAF58797.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI]
          Length = 423

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/324 (36%), Positives = 181/324 (55%), Gaps = 9/324 (2%)

Query: 1   MQLRHKTLTSAQ--DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q+ H+   S    +L+  N +   Q  +IK +   Y  A++P  A+L+     +DPI  
Sbjct: 75  WQMSHRISDSGALAELFGFNEM---QCAQIKRVGMRYRWAISPYYASLMEGDIEHDPIRL 131

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +P  EELN       DP+ +   SP   +  RYPDR+++ + + C +YCR C RR  +
Sbjct: 132 QSVPSIEELN--ETGHPDPMAEELTSPAPCVTRRYPDRLIINVTNKCAMYCRHCQRRRNI 189

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G +       +   AAL YI++  +I +V+ TGGD L+LS  ++  +L  L  IKHV+I 
Sbjct: 190 G-EVDRHSPHESLVAALEYIRKNREIRDVLITGGDALLLSDSKIDWLLSELDKIKHVEIK 248

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  +R  +  PQRI PEL   LK+   P+Y+    NHP E + E+  A   LA AG++L 
Sbjct: 249 RLGTRAIVTLPQRITPELCDVLKKH-PPIYVNTQFNHPREVTPESKQACDMLAEAGVVLG 307

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKG+N+DP ++  L +  +++ ++PYY+ H     GT HF   ++EG  I+  L+
Sbjct: 308 NQAVLLKGVNNDPHVMKKLNQELLKIMVRPYYIFHAKPVKGTLHFITAVDEGISIMEKLR 367

Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
              SGL  P YI++ P GYGK  +
Sbjct: 368 GYTSGLAVPTYIINAPNGYGKTPV 391


>gi|188586383|ref|YP_001917928.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179351070|gb|ACB85340.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 412

 Score =  206 bits (524), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 112/332 (33%), Positives = 183/332 (55%), Gaps = 6/332 (1%)

Query: 18  NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
           NL + E+  EI+++   Y  A++P  A+L++P +P  P+ +Q IP  +E+        DP
Sbjct: 80  NLTESER-QEIEQVGKDYRWAVSPYYASLMDPDDPECPVRKQSIPSAQEVKD-KAGVTDP 137

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALA 136
           + +   +P   +  RYPDR+++ + + C +YCR C R+  +G       + KD  E ++ 
Sbjct: 138 MAEEFTNPAGNVTRRYPDRLIINVTNQCAMYCRHCQRKRNIGEVDKP--TPKDVLEESIE 195

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
           Y++  ++I +V+ TGGD  +LS + L  +L  LR I HV+I+R  SR P+  PQRI   L
Sbjct: 196 YVKNHAEIRDVLLTGGDAFMLSDETLDWLLTELRKIPHVEIIRLGSRTPVTMPQRITQNL 255

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
              L +   P+Y+    NHP E + EA  A  +LA AG+ L +Q+VLL  IN+DP ++  
Sbjct: 256 CDILTKH-LPLYVNTQYNHPKELTAEAKKATFKLARAGVGLGNQAVLLNTINNDPHVMKT 314

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L    ++  ++PYY+ H     GT+HF   +E+G +I+  ++   SG+  P YI++ P G
Sbjct: 315 LCHELLKGMVRPYYIFHAKKVKGTTHFNTRVEDGLEILEKMRGYTSGMAIPSYIINAPDG 374

Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           +GK  I    +   G     I    N V +YP
Sbjct: 375 HGKTPIVPEYMISQGRDKVYIRTWENRVFEYP 406


>gi|302875509|ref|YP_003844142.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           cellulovorans 743B]
 gi|307687963|ref|ZP_07630409.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           cellulovorans 743B]
 gi|302578366|gb|ADL52378.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           cellulovorans 743B]
          Length = 424

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/330 (36%), Positives = 183/330 (55%), Gaps = 7/330 (2%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           + +E+ + IK++   Y   ++P  A+LI+  N N P+  Q +P   ELN   E   DP+G
Sbjct: 85  LSEEEAEHIKKVEQKYRWGISPYYASLIDESNSN-PVKLQCVPTLFELN--DEGTLDPMG 141

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYI 138
           +   SP   I  RYPDR+++ + ++C  +CR C RR  +G   K   +S  D E ++ YI
Sbjct: 142 EEYTSPAGTITRRYPDRLIINVTNMCASFCRHCQRRRNIGIVDKHQSIS--DLEESIEYI 199

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           +   +I +V+ TGG+PL+LS   +  +L  L  IK ++ +R  +RV    PQRI   L+ 
Sbjct: 200 RNNREIRDVLITGGEPLLLSDGMIDWLLGELFKIKTLEYVRIGTRVLATLPQRITANLLS 259

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            LK+   P+YI    NHP E + EA  A  +LAN GI L +Q+VLL GIN+D  ++  L 
Sbjct: 260 ILKKYS-PLYINTQFNHPLEITREAKEACDKLANIGIPLGNQTVLLNGINNDKYVMRLLN 318

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
           +  ++ RIKPYY+ H     GT+HF  +I++G +I+  L+   SG+  P YI++ P G G
Sbjct: 319 QELLKCRIKPYYIFHGKKIMGTTHFNTSIDDGIEIMEYLRGYTSGMAIPTYIINAPNGNG 378

Query: 319 KVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           K  I    I   G  +  I      + DYP
Sbjct: 379 KTPILPQYIISRGKNNVKIRTWEGKIFDYP 408


>gi|307824010|ref|ZP_07654237.1| lysine 2,3-aminomutase YodO family protein [Methylobacter
           tundripaludum SV96]
 gi|307734794|gb|EFO05644.1| lysine 2,3-aminomutase YodO family protein [Methylobacter
           tundripaludum SV96]
          Length = 336

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/272 (39%), Positives = 154/272 (56%), Gaps = 2/272 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +P KEEL   P    DP+GD   +   G++H+Y  R+L      C + CR
Sbjct: 66  NPHDPLLRQVLPIKEELFAYPGFSNDPVGDLAAATQVGVLHKYHGRVLFINTGSCAINCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR          LS +  +AA+  IQ+   I EVI +GGDPL+LS  RL ++++ L 
Sbjct: 126 YCFRRNF--PYADLQLSKQKEDAAIQAIQDDPSISEVILSGGDPLLLSDSRLTRLIRQLD 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKH++ +R HSR+PIV P RI  E I  L ++ K + I +H NH  E S+  IAA + L
Sbjct: 184 GIKHLKRIRIHSRLPIVLPARITDEFINTLTQSPKQIIIIVHCNHANEISDRVIAACASL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            N+GI L +QSVLL+G+ND+ E+L  L        I PYYLH  D A GT HF ++  E 
Sbjct: 244 KNSGITLFNQSVLLRGVNDNAEVLGELSEQLFSHGITPYYLHLLDKATGTGHFEVSEAEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             ++  ++  + G   P  + +  G   K  I
Sbjct: 304 LALMHQVQAALPGYLVPKLVKEQAGATSKQTI 335


>gi|126699870|ref|YP_001088767.1| L-lysine 2,3-aminomutase [Clostridium difficile 630]
 gi|254975845|ref|ZP_05272317.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-66c26]
 gi|255093232|ref|ZP_05322710.1| L-lysine 2,3-aminomutase [Clostridium difficile CIP 107932]
 gi|255307270|ref|ZP_05351441.1| L-lysine 2,3-aminomutase [Clostridium difficile ATCC 43255]
 gi|255314974|ref|ZP_05356557.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-76w55]
 gi|255517649|ref|ZP_05385325.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-97b34]
 gi|255650759|ref|ZP_05397661.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-37x79]
 gi|260683845|ref|YP_003215130.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196]
 gi|260687505|ref|YP_003218639.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291]
 gi|306520670|ref|ZP_07407017.1| lysine 2,3-aminomutase YodO family protein [Clostridium difficile
           QCD-32g58]
 gi|115251307|emb|CAJ69138.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Clostridium difficile]
 gi|260210008|emb|CBA64044.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196]
 gi|260213522|emb|CBE05249.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291]
          Length = 422

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/302 (37%), Positives = 175/302 (57%), Gaps = 4/302 (1%)

Query: 19  LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
           L KKE+ + IKE+   +  A++P   +LI+P +  DPI    IP   EL    +E  DP+
Sbjct: 80  LTKKEK-EYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSIPTHIELED-EQEDLDPM 137

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
           G+   +P   I  RYPDR+++ + + C +YCR C RR  +G Q+ +  S    + ++ YI
Sbjct: 138 GEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG-QQDSHKSKAIIQESIDYI 196

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           +E  +I +V+ TGGD L L    L+ +L  L+ I HV  +R  +R  +  PQRI  E   
Sbjct: 197 RENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRLGTRTLVTMPQRITDEFCN 256

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            LK+   PVYI  H NHP E ++E+  A  +LANAG+ L +Q+VLL GIN+D  ++  L 
Sbjct: 257 MLKKY-HPVYINTHFNHPMEITKESKEACEKLANAGVPLGNQAVLLNGINNDKFVMRCLN 315

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
           +  +++R+KPYY+       GT HF  ++++G +I+  L+   SG+  P YI++ P G G
Sbjct: 316 QELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGYTSGMAIPTYIVNAPKGGG 375

Query: 319 KV 320
           K 
Sbjct: 376 KT 377


>gi|255656236|ref|ZP_05401645.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-23m63]
 gi|296450329|ref|ZP_06892088.1| lysine 2,3-aminomutase [Clostridium difficile NAP08]
 gi|296878741|ref|ZP_06902744.1| lysine 2,3-aminomutase [Clostridium difficile NAP07]
 gi|296260822|gb|EFH07658.1| lysine 2,3-aminomutase [Clostridium difficile NAP08]
 gi|296430248|gb|EFH16092.1| lysine 2,3-aminomutase [Clostridium difficile NAP07]
          Length = 422

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/302 (37%), Positives = 175/302 (57%), Gaps = 4/302 (1%)

Query: 19  LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
           L KKE+ + IKE+   +  A++P   +LI+P +  DPI    IP   EL    +E  DP+
Sbjct: 80  LTKKEK-EHIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSIPTYIELED-EQEDLDPM 137

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
           G+   +P   I  RYPDR+++ + + C +YCR C RR  +G Q+ +  S    + ++ YI
Sbjct: 138 GEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG-QQDSHKSKAIIQESIDYI 196

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           +E  +I +V+ TGGD L L    L+ +L  L+ I HV  +R  +R  +  PQRI  E   
Sbjct: 197 RENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRLGTRTLVTMPQRITDEFCN 256

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            LK+   P+YI  H NHP E ++E+  A  +LANAG+ L +Q+VLL GIN+D  ++  L 
Sbjct: 257 MLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQAVLLNGINNDKFVMRCLN 315

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
           +  +++R+KPYY+       GT HF  ++++G +I+  L+   SG+  P YI++ P G G
Sbjct: 316 QELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGYTSGMAIPTYIVNAPKGGG 375

Query: 319 KV 320
           K 
Sbjct: 376 KT 377


>gi|255101396|ref|ZP_05330373.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-63q42]
          Length = 422

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/302 (37%), Positives = 175/302 (57%), Gaps = 4/302 (1%)

Query: 19  LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
           L KKE+ + IKE+   +  A++P   +LI+P +  DPI    IP   EL    +E  DP+
Sbjct: 80  LTKKEK-EYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSIPTHIELED-EQEDLDPM 137

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
           G+   +P   I  RYPDR+++ + + C +YCR C RR  +G Q+ +  S    + ++ YI
Sbjct: 138 GEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG-QQDSHKSKAIIQESIDYI 196

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           +E  +I +V+ TGGD L L    L+ +L  L+ I HV  +R  +R  +  PQRI  E   
Sbjct: 197 RENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRLGTRTLVTMPQRITDEFCN 256

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            LK+   P+YI  H NHP E ++E+  A  +LANAG+ L +Q+VLL GIN+D  ++  L 
Sbjct: 257 MLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQAVLLNGINNDKFVMRCLN 315

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
           +  +++R+KPYY+       GT HF  ++++G +I+  L+   SG+  P YI++ P G G
Sbjct: 316 QELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGYTSGMAIPTYIVNAPKGGG 375

Query: 319 KV 320
           K 
Sbjct: 376 KT 377


>gi|150390499|ref|YP_001320548.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149950361|gb|ABR48889.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 422

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/330 (34%), Positives = 186/330 (56%), Gaps = 5/330 (1%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           +  ++I++IK++   +  +++P    LI+ +N   PI    IP   E+     +  DP+ 
Sbjct: 85  LDDKEIEDIKKVGQEFRWSVSPYYTTLIDDNNKYCPIKLMAIPHGYEIANTKGD-TDPMA 143

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYI 138
           +   +P   I  RYPDR+++ + + C +YCR C RR  +G+    + +S++  + ++ YI
Sbjct: 144 EEFTNPAGSITRRYPDRLIINVTNECAMYCRHCQRRRNIGTND--LHTSREVLQESIDYI 201

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           ++  +I +V+ TGGD L LS+  L  +L  L  I  V  +R  SR  +  PQRI  +LI 
Sbjct: 202 RDNPEIRDVLITGGDALTLSNSMLDWLLGELHAIPSVDYIRLGSRTLVTMPQRITDKLIN 261

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            LK+   P++I  H NHP E +EE+ AA  RL+NAGI L +Q+VLL GIN++  ++  L 
Sbjct: 262 ILKKY-PPIFINTHFNHPMEITEESKAACDRLSNAGIPLGNQAVLLNGINNNKFVMRLLN 320

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
              ++ R++PYY+ H     GTSHF  ++++G +I+  L+   SG+  P YI++ PGG G
Sbjct: 321 HELLKCRVRPYYIFHAKHVIGTSHFNTSVDDGIEIMEYLRGYTSGMAIPTYIINAPGGKG 380

Query: 319 KVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           K  I    +   G+ S  I      V DYP
Sbjct: 381 KTPILPQYLISRGSHSIKIRTWDGEVIDYP 410


>gi|239827150|ref|YP_002949774.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70]
 gi|239807443|gb|ACS24508.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70]
          Length = 379

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/308 (37%), Positives = 173/308 (56%), Gaps = 10/308 (3%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           I KE+ +++KEI+N +   +     NLIN  +PNDPI +  IP + ELN           
Sbjct: 17  IPKEEREKLKEITNKFVFRVNDYYLNLINWDDPNDPIRKLVIPNEGELNEYGSWDASDEA 76

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
            N   P  G  H+Y    LL +  VC  YCRFCFR+ +  +     +S  D    + YI 
Sbjct: 77  ANYVVP--GCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRNDVKEAMS--DVTPGIEYIA 132

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
           +  +I  V+ TGGD LIL+ K+++ +++ LR I HV+I+RF S++P+ +P RI  + EL+
Sbjct: 133 QTPEINNVLLTGGDSLILATKKIRYIVERLRAIDHVKIIRFGSKLPVFNPMRIYEDQELL 192

Query: 198 QCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
              ++   P   +Y+  H NHP E +EEA  A   L +AG+I+++Q+ +LKGINDDPE+L
Sbjct: 193 DLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVVNQTPILKGINDDPEVL 252

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           A L+       + PYY       AG S F LT+EE  KIV   K + SGL +   ++ + 
Sbjct: 253 AELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEEVYKIVEQAKARTSGLGKRVRLV-MS 311

Query: 315 GGYGKVKI 322
              GK++I
Sbjct: 312 HSSGKIEI 319


>gi|302386645|ref|YP_003822467.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           saccharolyticum WM1]
 gi|302197273|gb|ADL04844.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           saccharolyticum WM1]
          Length = 419

 Score =  198 bits (504), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 110/306 (35%), Positives = 178/306 (58%), Gaps = 3/306 (0%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           IK++   Y  A++P   +L +PH+  DPI    IP  +EL   P    DP+G+   +P  
Sbjct: 90  IKKVEKKYRWAVSPYYLSLADPHDNYDPIRLLSIPTHKELED-PCLDLDPMGEEYTNPAG 148

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
            I  RYPDR+++ + + C +YCR C RR  +G ++    S +    ++ YI+E  +I +V
Sbjct: 149 CITRRYPDRLIINVTNECAMYCRHCQRRRNIG-EEDVHRSREMILESIEYIRENEEIRDV 207

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           + TGGD L LS + L+ ++K L+ I H+  +R  +R  +  PQRI  +L   L++   P+
Sbjct: 208 LITGGDALCLSDEDLEWMIKQLKEISHIDYIRLGTRSLVTMPQRITDQLCSMLRKY-HPI 266

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           YI  H NHP E ++ + AA  +LA++GI+L +Q+VLL GIN++  I+  L    ++ R++
Sbjct: 267 YINTHFNHPIEITKASKAACEKLADSGIVLGNQAVLLNGINNNKYIMRVLNHELLKCRVR 326

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
           PYY+ H     GT+HF  +IE+G +I+  L+   SG+  P +I++ P G GK  I  + I
Sbjct: 327 PYYIFHAKHVQGTAHFNTSIEDGIEIMEYLRGYTSGMAIPTFIVNAPKGQGKTPIFPNYI 386

Query: 328 KKVGNG 333
              G G
Sbjct: 387 VSRGPG 392


>gi|312110886|ref|YP_003989202.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp.
           Y4.1MC1]
 gi|311215987|gb|ADP74591.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp.
           Y4.1MC1]
          Length = 378

 Score =  198 bits (504), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/308 (36%), Positives = 176/308 (57%), Gaps = 10/308 (3%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           I KE+ +++K+I+N Y   +     NLIN  +PNDPI +  IP + ELN       D   
Sbjct: 16  IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPNEGELNEYGSW--DASD 73

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +  +  + G  H+Y    LL +  VC  YCRFCFR+ +  S     +S  D    + YI 
Sbjct: 74  EEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVKEAMS--DVTPGIEYIA 131

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
           +  +I  V+ TGGD LIL+ K+++++++ LR I HV+I+RF S++P+ +P RI  + EL+
Sbjct: 132 QTPEINNVLLTGGDSLILATKKIRQIVERLRAIDHVKIIRFGSKLPVFNPMRIYEDQELL 191

Query: 198 QCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
              ++   P   +Y+  H NHP E +EEA  A   L +AG+I+++Q+ +LKGINDDPE+L
Sbjct: 192 DLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVVNQTPILKGINDDPEVL 251

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           A L+       + PYY       AG S F LT+E+  +IV   K + SGL +   ++ + 
Sbjct: 252 AELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEKVYQIVEQAKARTSGLGKRVRLV-MS 310

Query: 315 GGYGKVKI 322
              GK++I
Sbjct: 311 HSSGKIEI 318


>gi|325294734|ref|YP_004281248.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065182|gb|ADY73189.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 351

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/312 (35%), Positives = 174/312 (55%), Gaps = 6/312 (1%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN--ILPEEREDPIGD 80
           E+ +  K++++ Y    TP   +L      +  I R   P   E++  I  +  EDP+ +
Sbjct: 27  EEKESFKKVTSIYPFLSTPYYLSL---AVKSCAIKRMIFPNIMEISEAIQSKGEEDPLSE 83

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
                   + HRYPDR+L+   + CP  CRFC R+     +K   +S  + E AL YI++
Sbjct: 84  ERDKKTLHLTHRYPDRVLVVTTNFCPTLCRFCMRKRN-WKKKTFFISDTEIENALNYIRK 142

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
              I +V+ +GGDPL L  +RL+K+L  L+ I HV+++R  +R P+  P R+  + +  +
Sbjct: 143 NENIRDVLISGGDPLFLPIERLKKLLFGLKAIDHVEVVRVGTRAPVTLPHRLLDDDLLEV 202

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
            E  + V++  H NHP E +E +  A+  L  AGI + +Q+VLLKGIND  +IL  L R 
Sbjct: 203 LEKAEKVWVNTHFNHPDEITELSKEAVKNLLKAGIPVNNQTVLLKGINDSADILEKLFRN 262

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
             +++++PYYL H D   G  HF  +I +G KI+  L ++IS    P+Y +D PGG GKV
Sbjct: 263 LQKIKVRPYYLFHCDPVKGVMHFSTSITKGIKILEKLFKRISPFAIPYYAVDGPGGKGKV 322

Query: 321 KIDTHNIKKVGN 332
           +I     KK GN
Sbjct: 323 QILPDRYKKEGN 334


>gi|117924254|ref|YP_864871.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1]
 gi|117608010|gb|ABK43465.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1]
          Length = 305

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 105/291 (36%), Positives = 156/291 (53%), Gaps = 9/291 (3%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           + + LTP +A+ +      DPI RQF P  EEL   P    DP+ +   SP+ G+VH+Y 
Sbjct: 18  FPMLLTPTMADCMRQPQEQDPIYRQFWPSAEELQNPPHYTTDPLQEAASSPMPGLVHKYQ 77

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTG 151
            R LL L   CPV+CR+CFRR       G + S  D +A    +   +Q   + E+I +G
Sbjct: 78  GRALLHLTDACPVHCRYCFRRH------GAITSPMDPQAEQQLVDHLAQDHTLQEIILSG 131

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           GDPL+L+  +    +  L  + H+Q +R HSRVP+ DP R+   +++ L+   K V + I
Sbjct: 132 GDPLMLNAPKWHWWMTQLAQLPHLQRIRIHSRVPVADPSRLTIPMLETLQNTAKSVVLVI 191

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
           H NH  E +  +  A+     AG ++L+QSVLL G+ND  EILA L    V L + PYYL
Sbjct: 192 HCNHAQELTPASEVALQACRQAGFLVLNQSVLLAGVNDSAEILAKLNLALVGLGVLPYYL 251

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           H  D   G +HF ++ +   +I+  L + + G   P  + + P   GK  I
Sbjct: 252 HLLDTVQGAAHFEVSPQRAMEIMRQLHQCLPGYALPKLVRERPELPGKEPI 302


>gi|220934405|ref|YP_002513304.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995715|gb|ACL72317.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 348

 Score =  196 bits (499), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 103/269 (38%), Positives = 152/269 (56%), Gaps = 2/269 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P +PNDP+ RQ +P   E   +P   EDP+GD       G++H+Y  R+LL     C 
Sbjct: 73  MRPGDPNDPLLRQVLPLDAEYRDVPGFVEDPVGDGAAMVAPGLLHKYRGRVLLVTTGACA 132

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V+CR+CFRR     +     +  + +AAL YI     I EVI +GGDPL LS +RL  + 
Sbjct: 133 VHCRYCFRRHFPYGEANP--ARGEWQAALDYIAGDDSIHEVILSGGDPLSLSDERLSGLA 190

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
             L  I HV+ LR HSR P++ P+R++ +L+  L+       + IHANH  E       A
Sbjct: 191 GALGEIPHVRRLRVHSRQPVILPERVDEDLLAWLRPGRFQTVLVIHANHAREIHWPVREA 250

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           ++RLA AG+ LL+QSVLL+G+NDD + LA+L  T     + PYYLH  D   G SHF++ 
Sbjct: 251 LARLARAGVSLLNQSVLLRGVNDDVDTLADLSETLSATGVMPYYLHQLDPVRGASHFQVD 310

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315
            +   ++   L+ ++ G   P  + ++PG
Sbjct: 311 DDRALRLHHGLRARLPGYLVPRLVREIPG 339


>gi|124431233|gb|ABN11266.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis]
          Length = 223

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            HRYPDR+LL + + CP+YCR C R+  VG    T+ +       + YI+   Q+ +V+ 
Sbjct: 1   THRYPDRVLLLVSNTCPMYCRHCTRKRRVGDND-TIPNKSAILQGIDYIRNTPQVRDVLL 59

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDP +LS   L  +L  LR I HV+I+R  +R P+V P RI PEL   LK+  KPV++
Sbjct: 60  SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
             H NHP E ++ A  A+  LA+AGI L +Q+VLL GIND P I+  L+      R++PY
Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           YL+  DL+ G SHFR  + +G +I+ SL    SG C P Y++D P
Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223


>gi|124431231|gb|ABN11265.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis]
          Length = 223

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            HRYPDR+LL + + CP+YCR C  +  VG  K T+ +       + YI+   Q+ +V+ 
Sbjct: 1   THRYPDRVLLLVSNTCPMYCRHCTSKRCVG-DKDTIPNKSAILQGIDYIRNTPQVRDVLL 59

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDP +LS   L  +L  LR I HV+I+R  +R P+V P RI PEL   LK+  KPV++
Sbjct: 60  SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
             H NHP E ++ A  A+  LA+AGI L +Q+VLL GIND P I+  L+      R++PY
Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           YL+  DL+ G SHFR  + +G +I+ SL    SG C P Y++D P
Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223


>gi|298528659|ref|ZP_07016063.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298512311|gb|EFI36213.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 357

 Score =  193 bits (491), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 105/283 (37%), Positives = 163/283 (57%), Gaps = 14/283 (4%)

Query: 38  ALTPVIANLINPHNPNDPIARQFIPQKEE-------LNILPEEREDPIGDNNHSPLKGIV 90
             TP  A+L++P +P  PI RQ +P  +E        + L  +    +G+        I 
Sbjct: 40  GTTPYFASLMDPQDPACPIRRQVVPSLKEKENKYGIQDYLIHKENRAVGEKRPD---CIA 96

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
            +Y DRI   +  VC  YCR CFR+E+V  Q G  L   D +  L +I+E  ++ +V+ T
Sbjct: 97  RQYQDRIAFTVTDVCANYCRHCFRKELVVDQ-GLSLRF-DVDEGLGWIREHPEVRDVLIT 154

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYI 209
           GGDP ILS ++L +++  LR I HVQ++RF +R PIV P RIN EL + L +  + PV+I
Sbjct: 155 GGDPFILSDEKLGRIITELRRIPHVQMIRFGTRTPIVLPSRINKELCEILGDFHRVPVWI 214

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
               NH  E +EE    +  L   G+ + +Q+VLLKGINDDP+    L +  + +RI+PY
Sbjct: 215 NTQCNHAREITEETARGVYDLMRCGVNVGNQAVLLKGINDDPQSFRELHQKLLTVRIRPY 274

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKISGLCQPFYIL 311
           Y+ + + A G  HFR  +E+G +++  +++   +GLCQP Y++
Sbjct: 275 YVFYCEPAPGIDHFRTPVEKGAELIRDAIRGHTTGLCQPMYVI 317


>gi|189500360|ref|YP_001959830.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
           phaeobacteroides BS1]
 gi|189495801|gb|ACE04349.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
           phaeobacteroides BS1]
          Length = 358

 Score =  193 bits (490), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/317 (35%), Positives = 175/317 (55%), Gaps = 24/317 (7%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           + S Q L     +  E+   I+ +   + +  TP  A+L++  +PN PI RQ IP  +E 
Sbjct: 13  VDSVQKLEQYINVTDEERRTIESLDTKWGV--TPYFASLMDKDDPNCPIRRQVIPSMQE- 69

Query: 68  NILPEEREDPIGDNNHSPLK-----------GIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
                 + +  G +N+   K            I  +Y DRI   ++  C +YCR CFR+E
Sbjct: 70  ------KVNEFGMDNYLLWKENRSTEEVRPDSIARQYHDRIAFTVIETCAIYCRHCFRKE 123

Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
           +V  Q   +    D +  LA+I E  +I +V+ TGGDPL+LS  +L +++  LR I HV+
Sbjct: 124 LVVDQDLKL--RMDVDEGLAWIAEHPEIRDVLITGGDPLLLSDDKLARLIGRLREIPHVE 181

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI 235
           ++R  SR+PIV PQRI   L + +    K PV+I    NHP E +EE   A+  L + GI
Sbjct: 182 MIRIGSRLPIVLPQRITEGLKKAIGGFHKVPVWINTQCNHPKEITEETAKAVYELMSCGI 241

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
            + +Q+VLLKGINDD E    L +  + +RI+PYY+ + + A G  HFR  +E+G +++ 
Sbjct: 242 NVGNQAVLLKGINDDVETFRELHQMLLRIRIRPYYVFYCEPAPGIDHFRTPVEKGAELIR 301

Query: 296 -SLKEKISGLCQPFYIL 311
            +L+   +GL QP Y+L
Sbjct: 302 DALRGHTTGLAQPMYVL 318


>gi|45657183|ref|YP_001269.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600421|gb|AAS69906.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 429

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 168/290 (57%), Gaps = 4/290 (1%)

Query: 36  SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95
           +++ TP   +L +P +PN PI +  +P+++E    PEE  DP+ +   SP+KG+ H YPD
Sbjct: 78  NVSATPYYISLADPEDPNCPIRKMILPREDECIFSPEESPDPLHEERLSPVKGLTHMYPD 137

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R+LL   H C VYCR C R   V   K  +L ++D E    YI+   +I +V+ +GGDPL
Sbjct: 138 RVLLFTNHECSVYCRHCMRGRKVSDSKERML-TEDLEICFDYIKSHPEITDVVLSGGDPL 196

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIH 212
            LS  ++  +L+ L  I+HV+I R  +R P+  P R+  +L   ++        ++    
Sbjct: 197 NLSDSKIDWILERLEKIEHVKICRLGTRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQ 256

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
            NH  E + EA  AI +L  AG+ + +Q VLLK +ND  + +  L +  +ELR++ YY++
Sbjct: 257 FNHSKECTPEAKEAILKLLKAGVNVGNQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMY 316

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            P+L  G+  FR  + +G +I+  ++ KI G+  P ++ DLPGG GK+ +
Sbjct: 317 DPELIPGSRGFRTPLAKGIEIIEFMRGKIGGMGIPQFVNDLPGGGGKITL 366


>gi|24215400|ref|NP_712881.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24196517|gb|AAN49899.1|AE011436_14 L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 416

 Score =  192 bits (489), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 168/290 (57%), Gaps = 4/290 (1%)

Query: 36  SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95
           +++ TP   +L +P +PN PI +  +P+++E    PEE  DP+ +   SP+KG+ H YPD
Sbjct: 65  NVSATPYYISLADPEDPNCPIRKMILPREDECIFSPEESPDPLHEERLSPVKGLTHMYPD 124

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R+LL   H C VYCR C R   V   K  +L ++D E    YI+   +I +V+ +GGDPL
Sbjct: 125 RVLLFTNHECSVYCRHCMRGRKVSDSKERML-TEDLEICFDYIKSHPEITDVVLSGGDPL 183

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIH 212
            LS  ++  +L+ L  I+HV+I R  +R P+  P R+  +L   ++        ++    
Sbjct: 184 NLSDSKIDWILERLEKIEHVKICRLGTRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQ 243

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
            NH  E + EA  AI +L  AG+ + +Q VLLK +ND  + +  L +  +ELR++ YY++
Sbjct: 244 FNHSKECTPEAKEAILKLLKAGVNVGNQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMY 303

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            P+L  G+  FR  + +G +I+  ++ KI G+  P ++ DLPGG GK+ +
Sbjct: 304 DPELIPGSRGFRTPLAKGIEIIEFMRGKIGGMGIPQFVNDLPGGGGKITL 353


>gi|326560914|gb|EGE11279.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 7169]
 gi|326563850|gb|EGE14101.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 46P47B1]
 gi|326566861|gb|EGE17000.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 103P14B1]
 gi|326571276|gb|EGE21298.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC1]
 gi|326571582|gb|EGE21597.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC7]
 gi|326576776|gb|EGE26683.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 101P30B1]
          Length = 356

 Score =  191 bits (486), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/271 (36%), Positives = 154/271 (56%), Gaps = 2/271 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E   +     DP+ +NNH+P+KG++H+Y  R+LL +   C V+CR+C
Sbjct: 69  HDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHKYQSRVLLTVTGACAVHCRYC 128

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FR+           S+ + +  + YI + +++ EVI +GGDPL L++KRL+  L  +  I
Sbjct: 129 FRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGGDPLSLNNKRLKLWLDKITAI 186

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ +R H+R+P+V P R++ ELI  ++   K + I +H NHP E  ++ IA   +L +
Sbjct: 187 GHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLHINHPNEIDDQLIAKTKQLKD 246

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AG  LL+QSVLL  INDD + L+ L +      I PYYLH  D   G +HF + I +   
Sbjct: 247 AGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLHILDKVQGAAHFDIDIHDAVG 306

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +   L E + G   P  + + P    K  ID
Sbjct: 307 LYWQLLEALPGYLVPKLVQERPNHPFKTPID 337


>gi|317129675|ref|YP_004095957.1| lysine 2,3-aminomutase YodO family protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315474623|gb|ADU31226.1| lysine 2,3-aminomutase YodO family protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 388

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 18/306 (5%)

Query: 11  AQDLYNANLIKKEQIDE-----IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           AQ  Y  N+ K  QI E     +K+I+  +   +     NLI+ +NPNDPI +  IP + 
Sbjct: 2   AQPKYIMNIDKITQIPEEERAKLKKITEKFVFRVNDYYLNLIDWNNPNDPIKKLIIPNEG 61

Query: 66  ELNILPEE--REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
           EL    EE  R D   ++ +    G  H+Y    LL +  VC  YCR+CFR+ +  +   
Sbjct: 62  EL----EEYGRWDASDEDTNYAAPGCQHKYGTTALLIVSEVCGAYCRYCFRKRLFRNDIK 117

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
             ++  D +  + YI+   QI  V+ TGGD LIL+ K+L+ +++ LR I HV+I+R  S+
Sbjct: 118 EAMA--DVQPGIEYIKNNPQINNVLLTGGDSLILATKKLRLIIEQLREIPHVKIIRLGSK 175

Query: 184 VPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           +P+ +P RI  + EL+  +KE   P   +Y+  H NHP E +EEA      L NAG I++
Sbjct: 176 MPVFNPMRIYEDQELLDLIKEYSTPEQRIYVMAHINHPVEITEEAKKGFDALHNAGAIVV 235

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+ +LKGINDDPE+LA L+       + PYY       AG + F LT+EE    V + K
Sbjct: 236 NQTPVLKGINDDPEVLAELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEAYNAVEAAK 295

Query: 299 EKISGL 304
            K SGL
Sbjct: 296 AKTSGL 301


>gi|326566522|gb|EGE16668.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 12P80B1]
 gi|326569812|gb|EGE19862.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC8]
          Length = 345

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 98/271 (36%), Positives = 154/271 (56%), Gaps = 2/271 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E   +     DP+ +NNH+P+KG++H+Y  R+LL +   C V+CR+C
Sbjct: 69  HDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHKYQSRVLLTVTGACAVHCRYC 128

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FR+           S+ + +  + YI + +++ EVI +GGDPL L++KRL+  L  +  I
Sbjct: 129 FRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGGDPLSLNNKRLKLWLDKITAI 186

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ +R H+R+P+V P R++ ELI  ++   K + I +H NHP E  ++ IA   +L +
Sbjct: 187 GHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLHINHPNEIDDQLIAKTKQLKD 246

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AG  LL+QSVLL  INDD + L+ L +      I PYYLH  D   G +HF + I +   
Sbjct: 247 AGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLHILDKVQGAAHFDIDIHDAVG 306

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +   L E + G   P  + + P    K  ID
Sbjct: 307 LYWQLLEALPGYLVPKLVQERPNHPFKTPID 337


>gi|284008180|emb|CBA74439.1| radical SAM superfamily protein [Arsenophonus nasoniae]
          Length = 340

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/274 (39%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           + NDP+ RQ I  K E N+ P    DP+ ++ HSP+ G++H+Y DR+LL +   C V CR
Sbjct: 67  DANDPLLRQVITLKSEFNLTPTFSADPLNEH-HSPIPGLLHKYQDRVLLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   + ++ + AL YIQ  +++ EVIF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYEENKG---NKQNWQTALNYIQRHTELNEVIFSGGDPLMAKDHELDWLMSRL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI   L Q    +   V +  H NH  E   E   A+ +
Sbjct: 183 ETIPHIKRLRIHSRLPVVIPARITTTLCQRFNISRLQVIMVTHINHANEIDNEFSHAMEQ 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+QSVLL+GIND+ + LA L     E  I PYYLH  D   G +HF +T EE
Sbjct: 243 LKQVNVTLLNQSVLLRGINDNADSLAKLSNKLFENGILPYYLHLLDKVQGAAHFMVTDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + I+  L  +ISG   P    ++ G   K  ID
Sbjct: 303 ARIIMKELLTRISGYLVPRLTREIGGKLSKTPID 336


>gi|15615505|ref|NP_243809.1| hypothetical protein BH2943 [Bacillus halodurans C-125]
 gi|10175565|dbj|BAB06662.1| BH2943 [Bacillus halodurans C-125]
          Length = 393

 Score =  191 bits (484), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/290 (36%), Positives = 168/290 (57%), Gaps = 9/290 (3%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           I KE+ +++K+I++ +   +     +LI+ ++PNDPI +  IP + EL+     R D   
Sbjct: 16  IPKEEREKLKQITDKFVFRVNDYYLSLIDWNDPNDPIRKLVIPNEGELS--EYGRWDASD 73

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           ++ +  + G  H+Y    LL    VC  YCR+CFR+ +  +     +S  D +  L YI 
Sbjct: 74  EDTNYVVPGCQHKYETTALLICSEVCGAYCRYCFRKRLFRNDVKEAMS--DVDPGLDYIA 131

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
           +  QI  V+ TGGDPLIL+ K+L+ +++ LR I HV+I+R  S++P+ +P RI  + +L+
Sbjct: 132 QTPQINNVLLTGGDPLILATKKLRYIIERLRAIDHVKIIRIGSKLPVFNPMRITEDEQLL 191

Query: 198 QCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           + ++E   P   +YI  H NHP E + EA  A   L +AG I+++Q+ +LKGINDDP++L
Sbjct: 192 ELIREYSTPDHRIYIMAHINHPVEITNEARQAFQALHDAGAIVVNQTPVLKGINDDPDVL 251

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           A L+       + PYY       AG + F LT+EE   IV   K K SGL
Sbjct: 252 AELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEVYNIVEKAKAKTSGL 301


>gi|326575138|gb|EGE25066.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis CO72]
 gi|326577548|gb|EGE27425.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis O35E]
          Length = 356

 Score =  190 bits (483), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 154/271 (56%), Gaps = 2/271 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E   +     DP+ +NNH+P+KG++H+Y  R+LL +   C V+CR+C
Sbjct: 69  HDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHKYQSRVLLTVTGACAVHCRYC 128

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FR+           S+ + +  + YI + +++ EVI +GGDPL L++KRL+  L  +  I
Sbjct: 129 FRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGGDPLSLNNKRLKLWLDKITAI 186

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ +R H+R+P+V P R++ ELI  ++   K + I +H NHP E  ++ IA   +L +
Sbjct: 187 GHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLHINHPNEIDDQLIAKTKQLKD 246

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AG  LL+QSVLL  INDD + L+ L +      I PYYLH  D   G +HF + I +   
Sbjct: 247 AGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLHILDKVQGAAHFDIDIHDAVG 306

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +   L E + G   P  + + P    K  +D
Sbjct: 307 LYWQLLEALPGYLVPKLVQERPNHPFKTPLD 337


>gi|296112655|ref|YP_003626593.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4]
 gi|295920350|gb|ADG60701.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4]
          Length = 356

 Score =  190 bits (482), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 97/271 (35%), Positives = 154/271 (56%), Gaps = 2/271 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E   +     DP+ +NNH+P+KG++H+Y  R+LL +   C V+CR+C
Sbjct: 69  HDPLLRQVLPDGRERMAVDGYSTDPLDENNHNPIKGLLHKYQSRVLLTVTGACAVHCRYC 128

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FR+           S+ + +  + YI + +++ EVI +GGDPL L++KRL+  L  +  I
Sbjct: 129 FRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGGDPLSLNNKRLKLWLDKITAI 186

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ +R H+R+P+V P R++ ELI  ++   K + I +H NHP E  ++ IA   +L +
Sbjct: 187 GHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLHINHPNEIDDQLIAKTKQLKD 246

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AG  LL+QSVLL  INDD + L+ L +      I PYYLH  D   G +HF + I +   
Sbjct: 247 AGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLHILDKVQGAAHFDIDIHDAVG 306

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +   L E + G   P  + + P    K  +D
Sbjct: 307 LYWQLLEALPGYLVPKLVQERPNHPFKTPLD 337


>gi|92114650|ref|YP_574578.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043]
 gi|91797740|gb|ABE59879.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043]
          Length = 356

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 150/276 (54%), Gaps = 2/276 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I P +P+DP+ RQ +P   E   +     DP+ +  H P  G++H+Y +R+LL     C 
Sbjct: 82  IRPGDPDDPLLRQVLPLDRESEPVAGFVGDPLEEAEHRPRPGLIHKYRNRVLLIASPACA 141

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           + CR+CFRR    ++     S    E  L Y+++ + I E IF+GGDPL    +RL  + 
Sbjct: 142 INCRYCFRRHFPYAENSP--SRGQWETTLDYLRQDTSINEAIFSGGDPLASPDRRLAWLA 199

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           + L  I H++ LR H+R+P+V P R++  L+  L        + +H NHP E       A
Sbjct: 200 ERLADIPHLKRLRLHTRLPVVIPDRVDSPLLDWLAATRLQTVMVVHINHPNEIDAGVADA 259

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + RL  AG+ LL+QSVLL+G+NDD E LA L     E+ I PYYLH  D   G +HF + 
Sbjct: 260 MQRLRGAGVTLLNQSVLLRGVNDDVETLARLSERLFEVGILPYYLHVLDPVEGAAHFDVP 319

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             E   +V +L+ +++G   P  + ++PG   K  +
Sbjct: 320 DAEAVSLVETLRTQLAGFLMPRLVREVPGEASKTPL 355


>gi|289207649|ref|YP_003459715.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp.
           K90mix]
 gi|288943280|gb|ADC70979.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp.
           K90mix]
          Length = 348

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 97/245 (39%), Positives = 145/245 (59%), Gaps = 2/245 (0%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           DP+GD++     G+VH+Y  R+LL     C V+CR+CFRRE   ++     S  D   A+
Sbjct: 100 DPVGDHDALAAPGLVHKYHGRVLLLTTGACAVHCRYCFRREFPYAEHNA--SQDDWAPAI 157

Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
           AYI   + I EVI +GGDPL LS +RL  +++ L  I H++ LR H+R+P+V P+R++ +
Sbjct: 158 AYIHADTSIREVILSGGDPLSLSDRRLADLVRRLEAIPHLERLRIHTRLPVVLPERVDEQ 217

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
           L+  L +      + +HANHP EF++ A  A++RL   GI LL+Q+VLL GINDDP+ L 
Sbjct: 218 LLSWLGKGRLHHVLVLHANHPREFADPAAPALARLQARGITLLNQAVLLAGINDDPDTLC 277

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            L        + PYYLH  D   GT+HF +T     ++  +L  ++ G   P  + ++PG
Sbjct: 278 ELQEAGFRHGVLPYYLHLLDRTRGTAHFEVTEHRALELHQALHARLPGYLVPRLVREIPG 337

Query: 316 GYGKV 320
             GK 
Sbjct: 338 EPGKT 342


>gi|149179351|ref|ZP_01857910.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797]
 gi|148841823|gb|EDL56227.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797]
          Length = 335

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 106/288 (36%), Positives = 159/288 (55%), Gaps = 6/288 (2%)

Query: 32  SNHYSIALTPV-IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           S H    + PV   N I P + +DP+ +Q +P + E   +P    D +GD N     GI+
Sbjct: 41  SAHLFPLMVPVSYLNRIEPGSLDDPLLKQILPVELENADIPGFETDAVGDLNVRATPGIL 100

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
            +Y  R LL +   C ++CR+CFRR      +   L+  D E     +Q  S + E+I +
Sbjct: 101 QKYHGRALLMVSGACAIHCRYCFRRHYPYGDEPRTLA--DWEPVWQSLQADSTVQEIILS 158

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP---ELIQCLKEAGKPV 207
           GGDPL+L+  RL  + + +  I HV+ LR HSR+P+V P RI+    E++  L E G   
Sbjct: 159 GGDPLLLTDLRLNDLCERIAAIPHVKRLRIHSRLPVVLPDRIHAGLLEMLHGLTEQGTMP 218

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           ++ IH NHP E + +   AI ++  AGI +L+QSVLLKGIND  E L  L    V L + 
Sbjct: 219 WMVIHINHPNEIAPDVELAIKQMLQAGIPVLNQSVLLKGINDTAETLIELSEKLVNLGVI 278

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
           PYYLH  D   G +HF +   +G+K++  L+ ++ G   P Y+ ++PG
Sbjct: 279 PYYLHQLDRVTGAAHFEVPQAQGRKLIEELRTRLPGYAVPQYVREIPG 326


>gi|284162142|ref|YP_003400765.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus
           DSM 5631]
 gi|284012139|gb|ADB58092.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus
           DSM 5631]
          Length = 368

 Score =  189 bits (479), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 106/292 (36%), Positives = 172/292 (58%), Gaps = 10/292 (3%)

Query: 26  DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
           ++++++   + + +T    +LI+ ++ NDPI R  IP  +EL+ L E   D  G++ ++ 
Sbjct: 29  EKLRKVVEIHPMNVTRYYLSLIDWNDSNDPIKRMAIPSPDELSCL-EGDYDTSGEHENTK 87

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           ++G+ H+Y +  L+   + C VYCR+CFR+ MVG  +  V+   D   A+ YI+E  ++ 
Sbjct: 88  MRGLQHKYSETALVLATNRCAVYCRYCFRKRMVGLTRDEVIRRLDR--AVKYIEEHEEVT 145

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN----PELIQCLK 201
            V+ +GGDP +L +K +++ L  L  I H+  +RF SRVP+  P R+N    PE++    
Sbjct: 146 NVLISGGDPFVLDNKIIKRFLNKLVEIPHLDFIRFGSRVPVTFPMRLNDDDLPEILGEFA 205

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           E  K +Y+  H NHP EF+EE+  AI RL + GI++ +Q+VLLKG+NDDP  LA L R  
Sbjct: 206 EL-KRIYVVTHYNHPKEFTEESTGAIKRLLDNGIVVSNQAVLLKGVNDDPYTLAELHRLL 264

Query: 262 VELRIKPYYLHHPD-LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YIL 311
           V   I PYY+     +      F++ ++EG KIV   K  + G  + F YI+
Sbjct: 265 VRYGIVPYYVFQCRPVKRVKGIFQVPLKEGYKIVERAKAMLDGHSKRFRYIM 316


>gi|126666938|ref|ZP_01737914.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17]
 gi|126628654|gb|EAZ99275.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17]
          Length = 350

 Score =  188 bits (478), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 2/273 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ +P  +E   L     DP+ + +     G++ +Y  R LL +   C + CR
Sbjct: 78  NPNDPLLRQVLPLVDETRTLAGFVADPLAEADAMATTGLIRKYKSRALLMVTGQCAINCR 137

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     ++   L  +D +  L  +    +I EVIF+GGDPL  + K L +  K L 
Sbjct: 138 YCFRRHFPYDEQR--LKPQDRQTVLDTLANSPEINEVIFSGGDPLAANDKLLAQWAKALE 195

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR H+R+P+V PQR+   L+Q ++     V + +H NHP E  +  + A+ RL
Sbjct: 196 QIPHLRRLRIHTRLPVVIPQRVCDALLQWIRATRLRVVVVLHINHPAEIDQATVQALQRL 255

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+QSV+L+G+ND  ++L  L     +  + PYYLH  D  AG  HF +   E 
Sbjct: 256 TEAGVTLLNQSVILRGVNDSVDVLEQLSEQLFDAGVLPYYLHAFDPVAGAHHFAVPDSEA 315

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           + +   L E++ G   P  + +LPG   K  +D
Sbjct: 316 KALTRELLERLPGFLVPRLVRELPGAGSKTPLD 348


>gi|332140129|ref|YP_004425867.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
           str. 'Deep ecotype']
 gi|327550151|gb|AEA96869.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
           str. 'Deep ecotype']
          Length = 341

 Score =  188 bits (478), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%)

Query: 17  ANLIKKEQIDEIKEISNHYSIALTPV-----IANLINPHNPNDPIARQFIPQKEELNILP 71
           A L++   +DE K   +  +  L P+      A+L+   NPNDP+  Q +P  +E    P
Sbjct: 28  AKLLQHLGLDEEKYAQHIKARRLFPMRVPRHFADLMEKGNPNDPLFLQVMPLSDEFLTSP 87

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
              EDP+ +++ +  KGI+H+Y  R+LL +   C V CR+CFRR          +S    
Sbjct: 88  GYSEDPLEEHD-TAGKGILHKYDSRVLLMVRTGCAVNCRYCFRRHF--PYADNAVSKHQW 144

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
           E  L YIQ    I EVIF+GGDPL+     L  +   +  I HV+ LR H+R+P+V P+R
Sbjct: 145 EEVLQYIQAHDNINEVIFSGGDPLMAKDDHLAWLANEIASINHVKRLRIHTRLPVVLPER 204

Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
           IN   +           + +HANH  E SE   + +  L   G+ LL+QSVLLKG+ND  
Sbjct: 205 INNAFVNWFTALPIQKVLVLHANHANEMSEALKSRLITLREKGVTLLNQSVLLKGVNDSG 264

Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
           E +++L     E  + PYYLH  D   G SHF ++ +EG+ I+    +++ G   P  + 
Sbjct: 265 EAISDLSEALFEASVLPYYLHVLDKVQGASHFYVSDDEGRHIMEEAIKRLPGFLVPKLVR 324

Query: 312 DLPGGYGKVKIDTH 325
           ++ G  GK  ID H
Sbjct: 325 EIGGQPGKTPIDLH 338


>gi|116207106|ref|XP_001229362.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51]
 gi|88183443|gb|EAQ90911.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51]
          Length = 498

 Score =  188 bits (478), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 23/305 (7%)

Query: 36  SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
           ++ +TP I + IN HNP +DPIARQF+P K  +  +P+  +   D + +   SP+KG+VH
Sbjct: 148 AVRMTPYILSRINWHNPRHDPIARQFLPLKSRM--IPDHPKLTLDSLHEEADSPVKGLVH 205

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIW 145
           RYPD+ L     VCP YC FC R   VG+   TV  +      +  + ALAYI  + Q+ 
Sbjct: 206 RYPDKALFLPTSVCPTYCTFCTRSYAVGADTATVSKASLKPGRRRWDEALAYIASQPQLQ 265

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELI 197
           +++ +GGD   L  ++L+++ + L  I H++  RF S+   V P R+           L+
Sbjct: 266 DIVVSGGDAYYLQAEQLEQLGERLIAIPHIRRFRFASKGLAVAPGRVLDRSGDGWTDALV 325

Query: 198 QC---LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           +     + AGK V    H NHP E S    AA  RL   G+++ +QSVLL+G+NDD E +
Sbjct: 326 RVSDRARRAGKAVAWHTHFNHPSEISWVTEAAAQRLFEEGVMVRNQSVLLRGVNDDVETM 385

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
             L+R      I PYY++  D+     H R  +     + A L+  I+G   P +++DLP
Sbjct: 386 GALIRGLANNNIFPYYVYQCDMVKSVEHLRTPLRTILDLEAKLRGSIAGFMMPSFVVDLP 445

Query: 315 GGYGK 319
           GG GK
Sbjct: 446 GGGGK 450


>gi|15642896|ref|NP_227937.1| hypothetical protein TM0121 [Thermotoga maritima MSB8]
 gi|4980613|gb|AAD35215.1|AE001698_4 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 368

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 101/291 (34%), Positives = 168/291 (57%), Gaps = 13/291 (4%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGD 80
           E+ + +K +   Y         +LI+  +P+DPI +  +P+++EL    EE    D   +
Sbjct: 21  EERERLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKIIVPEEDEL----EEWGTLDASNE 76

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
            +++  KG+ H+YPD  L  +  VC  +CRFCFR+ +  +    V+  +D    L YI+ 
Sbjct: 77  KSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRT 134

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQ 198
             +I  V+ TGGDPL+LS ++L+K++ +LR I HVQI+R  S++P  +P RI  +P+L++
Sbjct: 135 HKEITNVLLTGGDPLLLSTEKLEKIVSSLREIDHVQIIRIGSKIPAFNPYRIIDDPDLLK 194

Query: 199 CLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            +++     K +Y+    NHP E + EAI A++ L +AG +L +Q+ LL+GINDDPE+L 
Sbjct: 195 MIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGAVLCNQTPLLRGINDDPEVLG 254

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
            L+     + + PYY+      +G   F + IEEG +I       ISG+ +
Sbjct: 255 ELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTKAISNISGVAK 305


>gi|307544317|ref|YP_003896796.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581]
 gi|307216341|emb|CBV41611.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581]
          Length = 572

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 2/276 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I P +P+DP+ RQ +P  EE +  P    DP+ +  H+P +G++H+Y  R+LL     C 
Sbjct: 299 IRPGDPHDPLLRQVLPLDEESHSTPGFVTDPLEEREHTPRRGLIHKYAGRVLLIASPACA 358

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           + CR+CFRR     +     S       L Y++  + I E I +GGDPL  + ++L  ++
Sbjct: 359 INCRYCFRRHFPYDENAP--SRAQWADTLDYLRGDASIREAILSGGDPLAANDRQLGWLV 416

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           + L  I H++ LR H+R+P+V P RI+  L+  L        + +H NHP E  E  I A
Sbjct: 417 EQLEAIPHLKRLRIHTRLPVVIPDRIDGALLDWLGRTRLQKVVVLHINHPNEIDEAVIDA 476

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
             RL +AG+ LL+QSVLL GINDD + L  L     E  + PYYLH  D   G +HF + 
Sbjct: 477 CRRLRDAGVTLLNQSVLLAGINDDVDTLTALSERLFEADVLPYYLHVLDPVDGAAHFEID 536

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            +  + +V +++ ++ G   P  + ++PG   K  I
Sbjct: 537 DDTARTLVDAMRRELPGFLMPTLVREIPGEASKTPI 572


>gi|89092066|ref|ZP_01165021.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92]
 gi|89083801|gb|EAR63018.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92]
          Length = 337

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/298 (35%), Positives = 162/298 (54%), Gaps = 6/298 (2%)

Query: 25  IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG--DNN 82
           +D  ++ S+ +S+ +     + I P NP DP+ RQ +P  +EL  +     DP+   D N
Sbjct: 41  LDGAQKGSDLFSMKVPEPYLSRIEPGNPKDPLLRQVLPLNDELADVSGFVADPLAEMDAN 100

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           HS   G++H+Y  R+LL L   C + CR+CFRR      +   L S+  +  L Y++   
Sbjct: 101 HS--DGLIHKYKGRVLLILSGACAINCRYCFRRHF--PYQENRLGSEQWQQVLNYLKSDP 156

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            I EVIF+GGDPL  S  RL+++++ L  I H+  LR HSR+PIV PQR+   L+Q L++
Sbjct: 157 TISEVIFSGGDPLATSDNRLERMIRDLEEIPHLSRLRIHSRLPIVIPQRVTDRLLQILRD 216

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           +     + +HANHP E       +  R+ ++ I +L+Q+VLLKGIND  ++L  L     
Sbjct: 217 SRFSTVMVLHANHPNELDGSTAESAKRMKDSHITVLNQAVLLKGINDQVDVLQQLSEKLF 276

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           E  I PYYL   D   G +HF +  EE  K+   ++  + G   P    ++PG   K 
Sbjct: 277 EQGILPYYLFTLDPVKGAAHFDIPDEEAVKLHQQMQAVLPGYLVPKLAREIPGKTEKT 334


>gi|254447007|ref|ZP_05060474.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
           HTCC5015]
 gi|198263146|gb|EDY87424.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
           HTCC5015]
          Length = 343

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/270 (38%), Positives = 143/270 (52%), Gaps = 2/270 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+  Q +PQ  E   +     DP+GD N     G++H+Y  R+LL     C ++CR+C
Sbjct: 76  DDPLLLQALPQAVEHAEVAGFSADPVGDLNAQKTTGLLHKYHGRVLLVATGACAIHCRYC 135

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRRE    Q     S    + +L YI   S I EVI +GGDPL LS KRL K++  +  I
Sbjct: 136 FRREYPYEQASATQS--QWQESLDYIAADSSIHEVILSGGDPLTLSDKRLHKLIDRIETI 193

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            HVQ LR HSR+PIV P R+   L Q L ++     + +HANH  E       A+  L  
Sbjct: 194 SHVQRLRIHSRLPIVLPSRVTETLCQRLAQSRLRCIMVVHANHAQELDHTTAKALQDLRR 253

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AG+  L+Q+VLL GIND  E LA L     E    PYYLH  D   G +HF +     + 
Sbjct: 254 AGVDCLNQAVLLAGINDSVEALAQLSERLFEQGALPYYLHSLDRVHGAAHFEVDEARAKH 313

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           +VA L+E++SG   P  + ++ G   K  +
Sbjct: 314 LVAQLRERLSGYLVPTLVREIEGESSKTPL 343


>gi|148269938|ref|YP_001244398.1| lysine 2,3-aminomutase YodO family protein [Thermotoga petrophila
           RKU-1]
 gi|147735482|gb|ABQ46822.1| L-lysine 2,3-aminomutase [Thermotoga petrophila RKU-1]
          Length = 365

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/291 (35%), Positives = 167/291 (57%), Gaps = 13/291 (4%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGD 80
           E+ + +K I   Y         +LI+  +P+DPI +  +P+++EL    EE    D   +
Sbjct: 18  EERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKIVVPEEDEL----EEWGTLDASNE 73

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
            +++  KG+ H+YPD  L  +  VC  +CRFCFR+ +  +    V+  +D    L YI+ 
Sbjct: 74  KSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRS 131

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQ 198
             +I  V+ TGGDPL+LS ++L+K++ +LR I HVQI+R  S++P  +P RI  +PEL++
Sbjct: 132 HKEITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVQIIRIGSKIPAFNPYRIIDDPELLR 191

Query: 199 CLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            +++     K +Y+    NHP E +EEAI A++ L +AG +L +Q+ LL+GIND PE L 
Sbjct: 192 MIRKYSTKEKKIYVMTQFNHPKELTEEAIEAVNLLKDAGAVLCNQTPLLRGINDSPETLG 251

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
            L+     + + PYY+      +G   F + IEEG +I       ISG+ +
Sbjct: 252 ELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTKAISNISGVAK 302


>gi|170288623|ref|YP_001738861.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2]
 gi|170176126|gb|ACB09178.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2]
          Length = 365

 Score =  187 bits (476), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 167/291 (57%), Gaps = 13/291 (4%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGD 80
           E+ + +K I   Y         +LI+  +P+DPI +  +P+++EL    EE    D   +
Sbjct: 18  EERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKIVVPEEDEL----EEWGTLDASNE 73

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
            +++  KG+ H+YPD  L  +  VC  +CRFCFR+ +  +    V+  +D    L YI+ 
Sbjct: 74  KSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRT 131

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQ 198
             +I  V+ TGGDPL+LS ++L+K++ +LR I HVQI+R  S++P  +P RI  +P+L+ 
Sbjct: 132 HKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIRIGSKIPAFNPYRIIDDPDLLM 191

Query: 199 CLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            +++     K +Y+    NHP E + EAI A++ L +AG +L +Q+ LL+GINDDPE+L 
Sbjct: 192 MIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGAMLCNQTPLLRGINDDPEVLG 251

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
            L+     + + PYY+      +G   F + IEEG +I       ISG+ +
Sbjct: 252 ELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTKAISNISGVAK 302


>gi|329894763|ref|ZP_08270564.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088]
 gi|328922752|gb|EGG30085.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088]
          Length = 335

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/313 (34%), Positives = 170/313 (54%), Gaps = 4/313 (1%)

Query: 11  AQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
           + +L  A  + +  +D I  E +    +A  P +A +    NP DP+  Q +  +EE+  
Sbjct: 25  SAELLQAVGVPQSSLDTITGETAGFAVLAPRPFVARM-EYGNPKDPLLLQVLALQEEIAP 83

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
                 DP+ +   +P+ GI+H+Y  R+LL     C V CR+CFRR    +Q   +L+  
Sbjct: 84  NAVGTTDPLEEQRFTPVPGIIHKYFGRVLLMTAGTCAVNCRYCFRRHNDYAQN--ILTPA 141

Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
               AL Y++ +  I EVI +GGDPL+ S ++L +++  L  I H+Q LR H+R+PIV P
Sbjct: 142 RLNEALTYLRSQRDITEVILSGGDPLLTSDRKLSELVAELEAIPHIQRLRIHTRLPIVIP 201

Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
           QRI  EL Q L ++   V + +H NHP E   E   A+++L   GI LL+Q+VLLK IN+
Sbjct: 202 QRITTELCQRLGQSRFQVTLVVHCNHPKELDVEVGLAMAQLKAQGITLLNQTVLLKNINN 261

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
               L  L     ++ + PYYLH  D   G +HF   + + +++  +L+ ++ G   P  
Sbjct: 262 CAATLETLSVELFKIGVLPYYLHTLDPVQGAAHFAQPMGDSKQLHQTLQARLPGYLVPKL 321

Query: 310 ILDLPGGYGKVKI 322
           + ++PGG  K  I
Sbjct: 322 VSEIPGGASKTLI 334


>gi|297620566|ref|YP_003708703.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044]
 gi|297375867|gb|ADI37697.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044]
          Length = 327

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/323 (32%), Positives = 172/323 (53%), Gaps = 8/323 (2%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPV-IANLINPHNPNDPIARQF 60
           Q++ +  T+ + L  A+ ++ ++    + + N   +   P+ +A  I   N NDPI RQF
Sbjct: 12  QIQRQNFTNWEKL--ADFLELDEFHRQEIMKNPRFVLNLPIRLAKKIEKGNLNDPILRQF 69

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E+        DP+GD+       ++H+Y  R+LL     C ++CR+CFR+     
Sbjct: 70  LPMVAEMVETAGFVSDPVGDHACRKASKLLHKYNGRVLLVSTSACAMHCRYCFRQNF--- 126

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +  K  +  L  I +   I EVI +GGDPL LS++ L  +L+ +  I H+  LRF
Sbjct: 127 --DYEVEDKTFDEELEVISKDETIKEVILSGGDPLSLSNRHLGALLEKISAIPHINRLRF 184

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           HSR PI  P+RI+ E ++ +      V+  IH NHP E  ++    ++ L   G+ +L+Q
Sbjct: 185 HSRFPIGIPERIDDEFLEAVDRLPHQVWFVIHCNHPRELDKDIFDRLNTLRKLGVNILNQ 244

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+NDD + LA L  T  +  I PYYLH  D   G SHF ++ EEG +++  L  +
Sbjct: 245 AVLLRGVNDDADTLAELCETLSDHGIFPYYLHQLDRVQGASHFEVSKEEGLQLIDQLTRR 304

Query: 301 ISGLCQPFYILDLPGGYGKVKID 323
           + G   P Y+ ++ G   K  ++
Sbjct: 305 LPGYAVPKYVQEIAGEPSKTPLN 327


>gi|150020902|ref|YP_001306256.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
           melanesiensis BI429]
 gi|149793423|gb|ABR30871.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
           melanesiensis BI429]
          Length = 370

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/357 (33%), Positives = 190/357 (53%), Gaps = 36/357 (10%)

Query: 19  LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE--RED 76
           L +KE+  E+K+++  Y         +LIN  +PNDPI +  IPQ EEL    EE  + D
Sbjct: 15  LTEKEK-QELKKVTEKYKFRANDYYLSLINWEDPNDPIRKLIIPQLEEL----EEWGKLD 69

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
              + +++  KG+ H+Y D  LL +  VC  +CRFCFR+ +  +    V  ++D    L 
Sbjct: 70  ASNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINIGEEV--ARDVTEDLE 127

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NP 194
           YI++  +I  V+ TGGDPL+LS K+L+K++  +R I+HVQI+R  S++   +P RI  +P
Sbjct: 128 YIKKHKEITNVLLTGGDPLLLSTKKLEKIISQIREIEHVQIIRIGSKMVAFNPYRIIEDP 187

Query: 195 ELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
           ELI+ +K+     K +YI    NHP E +E+AI A++ L  AG IL +Q+ L+KG+NDD 
Sbjct: 188 ELIELIKKYSTNEKKIYIMTQFNHPRELTEQAIIAVNMLQKAGAILANQTPLIKGVNDDW 247

Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
           + L  L +    + + PYY+      AG   F + +EEG +I       +SGL +     
Sbjct: 248 KTLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEGYQIFLKAIMNVSGLAKRAR-F 306

Query: 312 DLPGGYGKVKID-------------THNIKKVGN--------GSYCITDHHNIVHDY 347
            +    GK+++               HN K  G          +Y   D++ +V +Y
Sbjct: 307 AMSHETGKIEVSALTKEHIIFRYQRAHNPKNAGKIMVFKRNPNAYWFDDYNELVEEY 363


>gi|257457951|ref|ZP_05623110.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580]
 gi|257444664|gb|EEV19748.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580]
          Length = 345

 Score =  187 bits (474), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 99/317 (31%), Positives = 164/317 (51%), Gaps = 9/317 (2%)

Query: 39  LTPVIANLINPHNPNDPIA--RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           ++P    LI    P    A  RQ +    E  +  EER DP+G+  +     +VH+YP+R
Sbjct: 30  VSPAFQALITSAEPAASAALRRQVLSSDSEQLVSEEERGDPLGEARYCVTPYLVHQYPNR 89

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +LL     C  YCR+CFRRE      G  LS        +Y++   ++ E++ +GGDP+ 
Sbjct: 90  VLLLSTGRCISYCRYCFRREFTARSSG-FLSEAQIGTVTSYLKTHPEVQEILVSGGDPMS 148

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
                ++ +L+ LR +    ++R  +R P+  P+      I  L+   +P+++  H NHP
Sbjct: 149 GGFGEIKHLLECLRSVCSDLLIRLCTRAPVFAPELFTEAFIMLLRSV-RPLWVIAHINHP 207

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E  +    A++R  ++GI + +Q+VLL+G+ND+P +LA L    V + +KP YL   DL
Sbjct: 208 AELGKAQRQALTRCIDSGIPVQTQTVLLRGVNDEPAVLAELFHALVCMGVKPGYLFQTDL 267

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HNIKKVG 331
           A GT+HFR+ +E+   I   L+ ++SGL  P + +DLP G GK  +         I  + 
Sbjct: 268 ARGTAHFRVPLEKAASIWKELRTRLSGLSLPQFAVDLPNGGGKFPLSALLRYEDIISPLQ 327

Query: 332 NGSYCITDHHNIVHDYP 348
           +G +        ++ YP
Sbjct: 328 DGRFSARGIDGKIYTYP 344


>gi|110835306|ref|YP_694165.1| hypothetical protein ABO_2445 [Alcanivorax borkumensis SK2]
 gi|110648417|emb|CAL17893.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 363

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 151/275 (54%), Gaps = 3/275 (1%)

Query: 46  LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVC 105
           L+   NP+DP+ RQ +   +E+   P    DP+ +  H+ + G++H+Y  R LL +   C
Sbjct: 88  LMERGNPHDPLLRQVLSVADEMVAQPGFSADPLDEAEHTAVPGLLHKYHGRALLVVTGAC 147

Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
            V+CR+CFRR        T LS K  + AL ++  +  I EVI +GGDPL LS++RL+++
Sbjct: 148 AVHCRYCFRRHF---PYQTHLSGKRWKQALEWLAARPDINEVILSGGDPLTLSNQRLEQL 204

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  L  I H++ LR HSR P+V P+R+   L   L        + +H NHP E S   + 
Sbjct: 205 LDALESIPHLRRLRIHSRTPVVIPERLEVGLKALLTWRRWQTVLVLHGNHPREISPALVE 264

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
               L +AGI LL+QSVLL G+ND  + LA L     +  + PYYLH  D   G +HF +
Sbjct: 265 RCRDLRSAGITLLNQSVLLAGVNDRADTLAELSDRLFDAGVMPYYLHQLDAVQGAAHFAV 324

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           + E  ++I A+L+ ++ G   P    + PG   K 
Sbjct: 325 SDEAAREIHAALRARLPGFLVPRLTREEPGEPAKT 359


>gi|325475292|gb|EGC78477.1| hypothetical protein HMPREF9353_00492 [Treponema denticola F0402]
          Length = 338

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 166/318 (52%), Gaps = 9/318 (2%)

Query: 37  IALTPVIANLINPHNPNDPIAR--QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           + ++     LI    P D  A   Q  P   E  +   E  DP+G+  +     +VH+Y 
Sbjct: 21  VLISSAFQKLIEEAEPEDSKALRLQVEPSACEKTVCSYETADPLGEQKYCITPYLVHQYE 80

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +R+LL     C  YCR+CFRR +  S+  + +   + +    YI++  Q+ E++ +GGDP
Sbjct: 81  NRVLLITTGKCLSYCRYCFRRGLT-SRSQSYIGDGELKEVTDYIKKMPQVTEILVSGGDP 139

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L    K+L+KVL  LR IK   ++R  +R PI  P+    EL+  LK+  KP+++  H N
Sbjct: 140 LSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELFTEELLHLLKKT-KPLWLIPHIN 198

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           HP E   E   A++    AGI + SQ+VLLKG+ND+ + L  L      + IKP YL   
Sbjct: 199 HPAELGAEQTNALNACIEAGIPIQSQTVLLKGVNDNEKTLIKLFHKLTCMGIKPGYLFQL 258

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HNIKK 329
           D AAGTSHFR+ ++E   +    + K+SGL +P +  DLPGG GK  +         I++
Sbjct: 259 DPAAGTSHFRVPLKEALDLWERAEPKLSGLSRPQFAADLPGGGGKFSLSALIYSKKIIEQ 318

Query: 330 VGNGSYCITDHHNIVHDY 347
             + S+       ++H Y
Sbjct: 319 KEDSSFSALGADGVIHKY 336


>gi|254784867|ref|YP_003072295.1| KamA family protein [Teredinibacter turnerae T7901]
 gi|237684557|gb|ACR11821.1| KamA family protein [Teredinibacter turnerae T7901]
          Length = 335

 Score =  187 bits (474), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 164/315 (52%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +T   DL +   +  + +   +  +  + + ++    + + P +PNDP+  Q +P  EE 
Sbjct: 22  ITKPADLLSRLSLDNQWLPAAERAAALFPLRVSEAFVSRMRPGDPNDPLLLQVLPLGEEF 81

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
            + P   EDP+ +   +P  G++H+Y  R+LL     C + CR+CFRR     Q     S
Sbjct: 82  AVTPGYSEDPLEEEKSNPAPGLIHKYHGRVLLIAAPHCAINCRYCFRRHFDYRQNTP--S 139

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             + +AALAYI+ + +I EVI +GGDPL+L  K+L+ +L  +  I H+  +R HSR+P+V
Sbjct: 140 RTEWQAALAYIKTRPEIDEVILSGGDPLMLGDKQLRWLLTEIDAIPHITRIRIHSRLPVV 199

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P R    L++ L      + +  H NH  E  +   A    L  AGI LL+Q+VLLK I
Sbjct: 200 LPDRFTSTLLELLSATRAQMVVVAHCNHSQEIDQSVEAVFEALKQAGITLLNQTVLLKNI 259

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   IL  L +   +  + PYYLH  D  +GT+H+ +   + +++   L  ++ G   P
Sbjct: 260 NDSANILIELSKRLFQSGVLPYYLHLLDRVSGTAHYEVDELDARRLREELLAQLPGYLVP 319

Query: 308 FYILDLPGGYGKVKI 322
             + + PG   K  I
Sbjct: 320 TLVKEEPGAPSKTPI 334


>gi|281412181|ref|YP_003346260.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila
           RKU-10]
 gi|281373284|gb|ADA66846.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila
           RKU-10]
          Length = 365

 Score =  186 bits (473), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/291 (34%), Positives = 166/291 (57%), Gaps = 13/291 (4%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGD 80
           E+   +K +   Y         +LI+  +P+DPI +  +P+++EL    EE    D   +
Sbjct: 18  EERGRLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKIIVPEEDEL----EEWGTLDASNE 73

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
            +++  KG+ H+YPD  L  +  VC  +CRFCFR+ +  +    V+  +D    L YI+ 
Sbjct: 74  KSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRS 131

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQ 198
             +I  V+ TGGDPL+LS ++L+K++ +LR I HVQI+R  S++P  +P RI  +P+L+ 
Sbjct: 132 HKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIRIGSKIPAFNPYRIIDDPDLLM 191

Query: 199 CLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            +++     K +Y+    NHP E + EAI A++ L +AG +L +Q+ LL+GINDDPE+L 
Sbjct: 192 MIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGAMLCNQTPLLRGINDDPEVLG 251

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
            L+     + + PYY+      +G   F + IEEG +I       ISG+ +
Sbjct: 252 ELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTKAISNISGVAK 302


>gi|42525588|ref|NP_970686.1| hypothetical protein TDE0069 [Treponema denticola ATCC 35405]
 gi|41815599|gb|AAS10567.1| conserved hypothetical protein TIGR00238 [Treponema denticola ATCC
           35405]
          Length = 338

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 168/318 (52%), Gaps = 9/318 (2%)

Query: 37  IALTPVIANLINPHNPNDPIAR--QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           + ++     LI    P D  A   Q  P   E  +   E  DP+G+  +     +VH+Y 
Sbjct: 21  VLISSAFQKLIEESEPEDSNALLLQVEPSACEKTVCSYETADPLGEQKYCITPYLVHQYE 80

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +R+LL     C  YCR+CFRR +    + + +   + +A   YI++  Q+ E++ +GGDP
Sbjct: 81  NRVLLITTGKCLSYCRYCFRRGLTARSQ-SYIGDGELKAVTDYIKKMPQVTEILVSGGDP 139

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L    K+L+KVL  LR IK   ++R  +R PI  P+    EL+  LK+  KP+++  H N
Sbjct: 140 LSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELFTEELLHLLKKT-KPLWLIPHIN 198

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           HP E  +E   A++    AGI + SQ+VLLKG+ND+ + L  L      + IKP YL   
Sbjct: 199 HPAELGKEQTNALNACIEAGIPIQSQTVLLKGVNDNEKTLIKLFHKLTCMGIKPGYLFQL 258

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HNIKK 329
           D AAGTSHFR+ ++E   +   ++ K+SGL +P + +DLP G GK  +         I++
Sbjct: 259 DPAAGTSHFRVPLKEALDLWERVEPKLSGLSRPQFAVDLPEGGGKFSLSALIYSKKIIEQ 318

Query: 330 VGNGSYCITDHHNIVHDY 347
             + S+       ++H Y
Sbjct: 319 KEDSSFSALGADGVIHKY 336


>gi|94500575|ref|ZP_01307106.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65]
 gi|94427365|gb|EAT12344.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65]
          Length = 345

 Score =  186 bits (473), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/321 (35%), Positives = 168/321 (52%), Gaps = 3/321 (0%)

Query: 10  SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
           SAQDL     +  E ++  +  +  + I +     + I P NP DP+  Q  P   E   
Sbjct: 27  SAQDLLEQLSMPLELLEGAELGAAQFPIRVPQSFIDRIEPGNPQDPLFLQIWPFSAEGET 86

Query: 70  LPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
            P     DP+ +N  +P+ GIVH+Y  R+LL +   C ++CR+CFRR      +   LS 
Sbjct: 87  PPLGFVTDPLEENAANPVPGIVHKYQGRVLLIVNGSCAIHCRYCFRRHF--PYEDNNLSL 144

Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
            + E AL YI+    I EVI +GGDPL  + KRL K++  +  I HV  LR HSR+PI  
Sbjct: 145 SEWEQALTYIENNPSINEVIMSGGDPLSSNDKRLFKLIDAIEAIPHVTRLRIHSRLPITL 204

Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
           P RI P+L Q L  +   + + +HANH  E S++  +A++RL +  I LL+Q+VLLKGIN
Sbjct: 205 PNRITPDLCQRLGSSRLNIVMVVHANHGNEISQDVHSAMTRLRSENIHLLNQTVLLKGIN 264

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           D  + L +L        + PYYLH  D   G  H+ +  +    ++  L+ ++ G   P 
Sbjct: 265 DTTQALIDLSEQLFAAGVMPYYLHLLDPVIGAHHYHVATDVALSLMDQLQAQLPGFLVPK 324

Query: 309 YILDLPGGYGKVKIDTHNIKK 329
            + ++PG   K  I T    K
Sbjct: 325 LVREVPGEASKTLIYTQKPPK 345


>gi|189346964|ref|YP_001943493.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM
           245]
 gi|189341111|gb|ACD90514.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM
           245]
          Length = 323

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/308 (34%), Positives = 166/308 (53%), Gaps = 7/308 (2%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           +L+H  +T+ + L     +   + + I        + +T   A L++  NP+DP+ +  I
Sbjct: 5   RLKHDLITTQEQLAEYVTLTDAEKEGICRCRPIMPMKITRHYAELLDRDNPDDPLRKLAI 64

Query: 62  PQKEELNILPEEREDPI--GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
           P  EEL   P++    I   +  + P++GI+HRYP ++LL     C  +CRFCFR E V 
Sbjct: 65  PSVEELVRYPDDEAVDIHRDEAKYQPVEGIIHRYPGKVLLMYTTACFSHCRFCFRSEKVA 124

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           S     L  +  + A+ Y+++   I +VIFTGGDP+  + +RL+  L  +R I HV+I+R
Sbjct: 125 S----TLDGRRLDKAIEYLRKNESIRDVIFTGGDPMHGNPERLEHALYEVRSIPHVEIIR 180

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             +R PI  P+    ELI+ L    KP+ +     HP E S+E  + + RL++AGI+LL 
Sbjct: 181 ITTRAPIFAPEIFTDELIRMLS-WFKPLIMITSFIHPRELSDEVCSVLDRLSDAGIMLLQ 239

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q  +LKGINDD + L  L    V+ R  PYY     ++ G  HF L  E  +K++  L+ 
Sbjct: 240 QGPILKGINDDVDTLRTLYEKLVQHRTMPYYATWGIVSPGNRHFTLDGESARKLIRQLEN 299

Query: 300 KISGLCQP 307
             SG C P
Sbjct: 300 TTSGFCIP 307


>gi|325107258|ref|YP_004268326.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
 gi|324967526|gb|ADY58304.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
          Length = 346

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 95/294 (32%), Positives = 161/294 (54%), Gaps = 2/294 (0%)

Query: 29  KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
           +  SN + + +     N + P  P+DP+ RQ +P ++EL        D +GD+      G
Sbjct: 55  RSASNDFPLLVPESFLNRMQPGEPDDPLLRQILPVEQELQPKQGFTTDAVGDDAARIAPG 114

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           ++ +Y  R L+  L  C V+CR+CFRR      +    S +  +  L  I ++  + E++
Sbjct: 115 LLQKYHGRALMITLGTCAVHCRYCFRRHYPYHDEPR--SREQWQETLNVIADRPDLEEIL 172

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            +GGDPL+L+ +RL +++  L  I H+Q LR H+R+PIV P R+  + +  L++      
Sbjct: 173 LSGGDPLVLNDRRLGELIDDLAKIPHLQRLRIHTRLPIVLPDRVTEQFLSLLQDTRLQPV 232

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           + +HANHP E   +  A++ RL+ AG  +L+Q+VLL+G+ND  +  A L R  +   + P
Sbjct: 233 VVVHANHPAEVVADCAASLKRLSRAGFPVLNQAVLLRGVNDTVDTQAELCRRLINAGVLP 292

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           YYLH  D   G +HF      G+ IV +LKE++ G   P ++ ++ G   K ++
Sbjct: 293 YYLHQLDRIQGAAHFETDAALGKAIVQALKERLPGYAVPRFVREIAGEPSKTEM 346


>gi|300113201|ref|YP_003759776.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii
           C-113]
 gi|299539138|gb|ADJ27455.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii
           C-113]
          Length = 335

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 149/270 (55%), Gaps = 2/270 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +PNDP+ RQ  P   E  I P    DP+GD    P  G++ +Y  R+LL     C ++CR
Sbjct: 65  DPNDPLFRQVFPLHAEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCR 124

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR           + +  + AL YI +   I EVI +GGDPL L+  RL ++ +TL 
Sbjct: 125 YCFRRHFPYGDHNP--AQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLA 182

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I HV+ LR H+R+P+V P+R++  L+Q L+E      + IHANH  E  +   AA++ L
Sbjct: 183 TISHVKRLRIHTRLPVVLPERVDNHLLQWLEETSLQKVVVIHANHVNELDDRVAAALNDL 242

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
           ++ G  L +Q+VLL+GIND    L++L     +  + PYYLH  D   G +HF + +   
Sbjct: 243 SHVGCRLFNQTVLLRGINDKVGALSDLSEGLFDAGVLPYYLHLLDKVQGAAHFEVDLMSA 302

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           Q++  +L+ ++ G   P  + +  G   K+
Sbjct: 303 QRLHRTLRARLPGYLVPLLVQEQAGAPSKL 332


>gi|53804590|ref|YP_113783.1| hypothetical protein MCA1321 [Methylococcus capsulatus str. Bath]
 gi|53758351|gb|AAU92642.1| conserved hypothetical protein TIGR00238 [Methylococcus capsulatus
           str. Bath]
          Length = 323

 Score =  186 bits (472), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 100/286 (34%), Positives = 155/286 (54%), Gaps = 2/286 (0%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           E +  +   +    A  + P +P DP+ RQ +P  +EL        DP+GD     + G+
Sbjct: 32  EAAGKFPFRVPRAYARKMRPGDPYDPLLRQVLPLAQELASPEGFVGDPVGDRPALKVPGL 91

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           +H+Y  R LL     C V+CR+CFRRE    +  +  + +  +AAL YI    ++ E+I 
Sbjct: 92  LHKYQGRALLITTGACAVHCRYCFRREFPYGE--SQFTRQREKAALDYIVRDPELTEIIL 149

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL+LS  RL ++ K L  I H++ LR HSRVP+V P RI+  L++ L        +
Sbjct: 150 SGGDPLLLSDDRLVRLTKQLTAIPHLRRLRVHSRVPLVLPSRIDERLLEILAGHRLKTVV 209

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
            IHANHP E   E ++ ++ +  AG+ LL+QSVLL+ +ND    L  L     E  + PY
Sbjct: 210 VIHANHPRELDAETVSVLAAMRRAGLTLLNQSVLLRQVNDSVSALCELSERLFECGVLPY 269

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
           YLH  D   GT+HF +   E + +  +L+ ++ G   P  + ++ G
Sbjct: 270 YLHLLDRVRGTAHFEVPEAEARALHEALRRRLPGFLVPRLVREVEG 315


>gi|95930510|ref|ZP_01313245.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
 gi|95133345|gb|EAT15009.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
          Length = 365

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/324 (34%), Positives = 174/324 (53%), Gaps = 26/324 (8%)

Query: 7   TLTSAQDLYN-ANLIKK-EQ----IDEIKEI--SNHYSIALTPVIANLINPHNPNDPIAR 58
           T T  Q L N  N I++ EQ     D+ ++I   N  +   TP  A+L++  +P  PI +
Sbjct: 9   TQTWQQQLANFVNTIERLEQYVNLTDDERQILEQNKTTWGTTPYFASLMDADDPQCPIRK 68

Query: 59  QFIPQKEELN---------ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           Q IP   E           +  E R     D        I  +Y DR+   +   C +YC
Sbjct: 69  QVIPSSLEQQNTYGMDDYLMWKENR-----DTEEQRPDSIARQYKDRVAFTVTQTCGIYC 123

Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           R CFR+E+V    G +    + +  L +I +  ++ +V+ TGGDPL+L  +++  +++ L
Sbjct: 124 RHCFRKELVVD--GDLTFDFNVDDGLEWISQHPEVRDVLITGGDPLLLPDEKIAYLIERL 181

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAIS 228
           R I H+Q++RF SRVPIV PQRI PEL   L    K P+++    NHP E +E    A+ 
Sbjct: 182 RAIPHIQMIRFGSRVPIVLPQRITPELKNILGGNHKVPIWLNTQCNHPKELTEHTAQAVY 241

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
            L   G+ + +Q+VLLKGINDD E    L +  + +RI+PYY+ + + A G  HFR  +E
Sbjct: 242 DLMTCGVNVGNQAVLLKGINDDVETFRELHQKLLRVRIRPYYVFYCEAAPGIDHFRTPVE 301

Query: 289 EGQKIVA-SLKEKISGLCQPFYIL 311
           +G +++  +L+   +GL QP Y++
Sbjct: 302 KGAELIRDALRGHTTGLAQPMYVV 325


>gi|167758002|ref|ZP_02430129.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704]
 gi|167664434|gb|EDS08564.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704]
          Length = 363

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 107/303 (35%), Positives = 175/303 (57%), Gaps = 14/303 (4%)

Query: 24  QIDEIKEIS----NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           QI+E  +I+    N Y +++     +L+NP + NDPI +  IP   E+++      D  G
Sbjct: 23  QINEYGDIASKVLNKYPMSIPRYYLSLVNPDDANDPIRKMCIPSFLEMDL--AGTFDTSG 80

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +++++ L+G+ H+YP  +L+   + C +YCR+CFR+ MVGS  GT     D + A++YI 
Sbjct: 81  ESSNTKLQGLQHKYPQTVLMLSTNRCAMYCRYCFRKRMVGS--GTQEVVADIKEAISYIL 138

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
           +  +I  V+ +GGD  +L    +++ L +L  I H+  +RF ++ P+V PQRI  +  L 
Sbjct: 139 KHEEITNVLISGGDSFLLDTDIIREYLDSLSAIGHLDYIRFGTKTPVVFPQRILEDSRLQ 198

Query: 198 QCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
             L+E G  K +YI    NHP E +E++I+A+  L   G+I+ +Q+VLLKG+ND PE LA
Sbjct: 199 DILREYGHKKQIYIVTQFNHPRELTEDSISAVRCLQGLGLIVKNQTVLLKGVNDCPETLA 258

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKISGLCQPF-YILDL 313
            L R F EL I PYY+       G  + F++ ++ G  I+   K   +G  + F ++L  
Sbjct: 259 RLFRRFTELGIIPYYIFQCRPVTGVMNQFQVPLQAGYDIIEQAKAMQNGNGKCFRFVLSN 318

Query: 314 PGG 316
           P G
Sbjct: 319 PDG 321


>gi|77166085|ref|YP_344610.1| hypothetical protein Noc_2627 [Nitrosococcus oceani ATCC 19707]
 gi|254435948|ref|ZP_05049455.1| KamA family protein [Nitrosococcus oceani AFC27]
 gi|76884399|gb|ABA59080.1| L-lysine 2,3-aminomutase [Nitrosococcus oceani ATCC 19707]
 gi|207089059|gb|EDZ66331.1| KamA family protein [Nitrosococcus oceani AFC27]
          Length = 335

 Score =  186 bits (471), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 97/270 (35%), Positives = 148/270 (54%), Gaps = 2/270 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +PNDP+ RQ  P   E  I P    DP+GD    P  G++ +Y  R+LL     C ++CR
Sbjct: 65  DPNDPLFRQVFPLHAEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCR 124

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR           + +  + AL YI +   I EVI +GGDPL L+  RL ++ +TL 
Sbjct: 125 YCFRRHFPYGDHNP--AQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLA 182

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I HV+ LR H+R+P+V P+R++  L+Q L+       + IHANH  E  +   AA++ L
Sbjct: 183 TISHVKRLRIHTRLPVVLPERVDHHLLQWLEGTSLQKVVVIHANHVNELDDRVAAALNDL 242

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
           + AG  L +Q+VLL+GIND    L++L     +  + PYYLH  D   G +HF + I   
Sbjct: 243 SRAGCRLFNQTVLLRGINDKVSALSDLSEGLFDTGVLPYYLHLLDKVQGAAHFEVDIITA 302

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           Q++  +L+ ++ G   P  + +  G   K+
Sbjct: 303 QRLHRTLRARLPGYLVPLLVQEQAGAPSKL 332


>gi|239994935|ref|ZP_04715459.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
           ATCC 27126]
          Length = 341

 Score =  185 bits (470), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 100/283 (35%), Positives = 157/283 (55%), Gaps = 3/283 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
             +L+   NPNDP+  Q +P  +E    P   EDP+ D + +  KGI+H+Y  R+LL + 
Sbjct: 59  FVDLMEKENPNDPLFLQVMPLSDEFLTSPGYSEDPL-DEHDTAGKGILHKYDSRVLLMVR 117

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C V CR+CFRR    +     +S       L Y++  ++I EVIF+GGDPL+   + L
Sbjct: 118 TGCAVNCRYCFRRHFPYADNA--VSKHQWLDVLEYLRSNNKINEVIFSGGDPLMAKDEHL 175

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
             +   +  I H++ LR HSR+P+V P+RI+ + ++          + +HANH  E SE 
Sbjct: 176 SWLANEITTIPHIKRLRIHSRLPVVLPERISHDFVEWFTALPLQKVLVLHANHANEMSET 235

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
             + +  L   G+ LL+QSVLLKG+ND  + +++L  T  E  + PYYLH  D   G SH
Sbjct: 236 LKSRLKTLRERGVTLLNQSVLLKGVNDSGDAISDLSETLFEAGVLPYYLHVLDKVQGASH 295

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           F ++ +EG++I+    +++ G   P  + ++ G  GK  ID H
Sbjct: 296 FYVSDDEGREIMEEAIKRLPGFLVPKLVREIGGQPGKTPIDLH 338


>gi|269469270|gb|EEZ80789.1| lysine 2,3-aminomutase [uncultured SUP05 cluster bacterium]
          Length = 314

 Score =  185 bits (470), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 99/284 (34%), Positives = 163/284 (57%), Gaps = 6/284 (2%)

Query: 34  HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
           H+ I +    ANLI+ +NP DP+ +Q I  +       E    P+ D +++P++G++H+Y
Sbjct: 32  HFPIKIPLEFANLIDKNNPEDPLLKQVINSQARFGS-SEFFLSPLDDESNAPVEGLIHKY 90

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P+R+LL    VC ++C++CFR+    ++   +    +  A   YI+  +QI EVI +GGD
Sbjct: 91  PNRVLLIASRVCAIHCQYCFRQNFNYAEHDAL---SNWLAIEDYIRAHTQINEVILSGGD 147

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL LS ++LQ +++ +  I H++ LR HSR  +V P RI  +L Q L +    V + +H+
Sbjct: 148 PLSLSDEKLQALIQKIERIPHIRTLRIHSRSAVVTPSRITDQLAQILNQTSLNVVVVLHS 207

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NH  E S E +  I +L+   I LL+QSVLLKG+ND  + L++L     +  + PYYLH 
Sbjct: 208 NHANELSSEFVKNIGKLSQ--ITLLNQSVLLKGVNDSAQALSDLSLQLFDAGVLPYYLHL 265

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
            D  +G  HF +  +  +++   LK+ +SG   P  + D  G +
Sbjct: 266 LDKVSGAEHFLVGDQCAKELHQQLKKNLSGYLVPRLVRDENGEF 309


>gi|288937552|ref|YP_003441611.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola
           At-22]
 gi|288892261|gb|ADC60579.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola
           At-22]
          Length = 342

 Score =  185 bits (470), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 102/274 (37%), Positives = 153/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ +  +EE  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPNDPLLRQVLTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +GT    ++ + A+ YI    Q+ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYAENQGT---RRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I HV+ LR HSR+PIV P RI   L    + +   V +  H NH  E  +E  AA++ 
Sbjct: 183 EAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAM 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+G+ND+ + LA+L     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   ISG   P    ++ G   K  +D
Sbjct: 303 AREIMRELLTLISGYMVPKLAREIGGEPSKTPLD 336


>gi|157374957|ref|YP_001473557.1| lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3]
 gi|157317331|gb|ABV36429.1| Lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3]
          Length = 397

 Score =  185 bits (470), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 174/293 (59%), Gaps = 4/293 (1%)

Query: 39  LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP-LKGIVHRYPDRI 97
           +TP IA L++  +   PI  Q++P++ E+++ P+E  D + +++  P    IVHRYP+R+
Sbjct: 80  ITPYIAQLMDKDDQACPIRIQYVPEQNEMDVAPQEMGDQLAEDDMMPDGTSIVHRYPNRV 139

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L  + ++C  YCR C R+ MV S    V+S +    ++ Y++E  ++ +V+ +GGDPL+L
Sbjct: 140 LFLVHNICGAYCRHCTRKRMV-SDPLNVISMERIRKSVEYLREHPEVQDVLLSGGDPLLL 198

Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           +  +L +VL  +R  +  ++ILR  SR+P   P RI PEL Q L +  +   +    NHP
Sbjct: 199 TDDKLDQVLSMIREARPDLKILRIGSRLPTQLPTRITPELCQILVK-NRVTLLNTQVNHP 257

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E +   +  ++ L  +GI+L +QSVL+KG+ND  E++ +L+   V   I+PYY++  D 
Sbjct: 258 KEITPLFVKHMAMLRTSGIMLGNQSVLIKGVNDSVEVMRDLVMDLVSNGIRPYYVYSMDP 317

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
           A G S F+++ +   +I   ++  +SG   P +I+D  GG GK+ +    ++K
Sbjct: 318 APGNSKFQVSYDRMLEIYHGIRGWVSGPAIPTFIVDGIGGLGKMPVQPEYVRK 370


>gi|206577764|ref|YP_002240896.1| KamA family protein [Klebsiella pneumoniae 342]
 gi|290512290|ref|ZP_06551657.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55]
 gi|206566822|gb|ACI08598.1| KamA family protein [Klebsiella pneumoniae 342]
 gi|289775285|gb|EFD83286.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55]
          Length = 342

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 102/274 (37%), Positives = 153/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ +  +EE  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPNDPLLRQVLTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +GT    ++ + A+ YI    Q+ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYAENQGT---RRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I HV+ LR HSR+PIV P RI   L    + +   V +  H NH  E  +E  AA++ 
Sbjct: 183 EAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAM 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+G+ND+ + LA+L     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   ISG   P    ++ G   K  +D
Sbjct: 303 AREIMRELLTLISGYMVPKLAREIGGEPSKTPLD 336


>gi|225175029|ref|ZP_03729026.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
           alkaliphilus AHT 1]
 gi|225169669|gb|EEG78466.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
           alkaliphilus AHT 1]
          Length = 371

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 108/333 (32%), Positives = 182/333 (54%), Gaps = 23/333 (6%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK-EELN--------IL 70
           + +E+ D I+     +    TP   +L++  NP  PI RQ IP K E +N        + 
Sbjct: 24  VTEEEADAIRNCETRW--GTTPYFVSLMDKENPECPIRRQVIPSKHENVNEFGIENYLVY 81

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
            E R     DN+      I  +Y DRI + + + C +YCR CFR+E+V  +  ++    D
Sbjct: 82  KENR-----DNHEQRPDTIARQYKDRIAMTITNHCGIYCRHCFRKELVVDK--SMQLRFD 134

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
            +  L ++++  ++ EV+ TGGDP +L   +++ +++ LR + H++++RF SR+PIV PQ
Sbjct: 135 VDEGLEWVRQHPELREVLITGGDPFLLPDDQIEYIIRKLREVPHIEMIRFGSRLPIVLPQ 194

Query: 191 RINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
           RI P L + L +  K P+++    NH  E +E    AI  L   G+ + +Q+VL+KGIND
Sbjct: 195 RITPGLKKVLGQYHKVPIWVNTQCNHAKEITERTAQAIWDLLTCGVNVGNQAVLMKGIND 254

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKISGLCQPF 308
           D      L +  + +RI+PYY+ + + A G  HFR  +E+G +++  +L+   SGL QP 
Sbjct: 255 DEHSFQQLHQKLLSIRIRPYYVFYLEPAPGIDHFRTPVEKGAELIRDTLRGHTSGLAQPM 314

Query: 309 YILDLPGGYGKVKI-DTHNIKKVGNGSYCITDH 340
           Y+  +    GKV +   + IK+     Y + +H
Sbjct: 315 YV--IATNIGKVPLMPDYYIKEKNEKEYILQNH 345


>gi|168231369|ref|ZP_02656427.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|194472138|ref|ZP_03078122.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194458502|gb|EDX47341.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|205334318|gb|EDZ21082.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
          Length = 342

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 100/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            +AG+ LL+QSVLL+G+ND+   LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHAGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|254427978|ref|ZP_05041685.1| KamA family protein [Alcanivorax sp. DG881]
 gi|196194147|gb|EDX89106.1| KamA family protein [Alcanivorax sp. DG881]
          Length = 335

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 152/276 (55%), Gaps = 3/276 (1%)

Query: 45  NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
           +L+   NP+DP+ RQ +   EE  +      DP+ + +H+ + G++H+Y  R LL +   
Sbjct: 59  DLMERGNPDDPLLRQVLSAPEERQVHQGYSADPLDEADHTAVPGLLHKYHGRALLVVTGA 118

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C V+CR+CFRR        T LS K  E AL ++  +  I EVI +GGDPL L+++RL++
Sbjct: 119 CAVHCRYCFRRHF---PYQTHLSGKRWEQALEWLAARPDIHEVILSGGDPLTLTNRRLEQ 175

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
           +L  L  I H++ LR HSR P+V P+R++  L   L        + +HANHP E S   +
Sbjct: 176 LLDALAAIPHLRRLRIHSRTPVVIPERLDAGLKALLTRDRWQTVLVLHANHPREISPALV 235

Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
           A      +AG+ LL+QSVLL G+ND  + LA+L     +  + PYYLH  D   G +HF 
Sbjct: 236 ARCRDWRSAGMTLLNQSVLLAGVNDRVDTLADLSDALFDAGVLPYYLHQLDAVQGAAHFA 295

Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           +     +++ A L+ ++ G   P    + PG   K 
Sbjct: 296 VPDVIARELHADLRARLPGFLVPRLTREEPGEPAKT 331


>gi|288941476|ref|YP_003443716.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum
           DSM 180]
 gi|288896848|gb|ADC62684.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum
           DSM 180]
          Length = 335

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/316 (31%), Positives = 157/316 (49%), Gaps = 2/316 (0%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R    T   +L     + + +I ++      + + +       +   +P+DP+ RQ +P 
Sbjct: 18  RVTAFTQVDELLAFLELDRTRIPDLDAEPESWGLRVPRTFVERMRRGDPDDPLLRQVLPL 77

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
             E   +     DP+GD       G++ +Y  R LL +   C ++CR+CFRR       G
Sbjct: 78  TAERQQVAGYVTDPVGDACAERAPGLLVKYAGRALLMVTGACAIHCRYCFRRHFPYQDLG 137

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
              S    E AL  I     + EV+ +GGDPL+L   RL  +++ L  I H+Q LR HSR
Sbjct: 138 P--SQARLERALDEIARDPSLTEVVLSGGDPLMLDDDRLDALIRDLECITHLQRLRLHSR 195

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+V P R+   L   L        + IHANHP E  E   +A+     AG+ LL+QSVL
Sbjct: 196 VPVVSPSRLTARLAASLTRGRFASTLVIHANHPRELDEVVRSALLDWRAAGVTLLNQSVL 255

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+ND  EILA L        + PYYLH  D  AG++HF +   E ++++  ++ ++ G
Sbjct: 256 LRGVNDRIEILAELSERLFACGVLPYYLHGLDPVAGSAHFEVDDAEARRLLDGVRARLPG 315

Query: 304 LCQPFYILDLPGGYGK 319
              P  + ++PG + K
Sbjct: 316 YLVPRLVREIPGDHSK 331


>gi|326794182|ref|YP_004312002.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea
           MMB-1]
 gi|326544946|gb|ADZ90166.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea
           MMB-1]
          Length = 336

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 155/275 (56%), Gaps = 4/275 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   N NDP+  Q +PQ +EL  +    +DP+ + NH+P K +VH+Y  R+L+    +C 
Sbjct: 60  IEKGNLNDPLLLQVLPQHQELADVEGYLKDPLQEANHTPQKALVHKYESRVLVITTGICA 119

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR    G  +   L+  + ++ + Y+     I EVI +GGDPL+L  K L + 
Sbjct: 120 VNCRYCFRRHFPYGDNQ---LAQSEWQSVIDYVTNDKNINEVILSGGDPLMLKDKVLAER 176

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           +++L  I H++ LR H+R+P+V P RI+ ELI  + ++   + +  H NH  E  +   +
Sbjct: 177 VRSLESIAHLKRLRIHTRLPVVIPSRIDDELIYWMSQSRLSIVLVTHINHANEIDQAVES 236

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           A+ RL   G+ LL+Q VLLK +ND  E   +L     ++ + PYY+   D  AG +HF +
Sbjct: 237 AMLRLKQIGVTLLNQGVLLKNVNDSVEAQVDLSNRLFQVGLLPYYMFTFDPVAGAAHFDI 296

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
            IE+ Q+++  + +K+ G   P    ++PG   K 
Sbjct: 297 PIEDAQRLMGEVTKKLPGYLVPKLAKEIPGRASKT 331


>gi|62182782|ref|YP_219199.1| hypothetical protein SC4212 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62130415|gb|AAX68118.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322717283|gb|EFZ08854.1| Elongator protein [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 342

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWRVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G++LL+QSVLL+G+ND+   LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHVGVMLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|296100915|ref|YP_003611061.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055374|gb|ADF60112.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 342

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/274 (37%), Positives = 155/274 (56%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ +Q +  +EE    P    DP+ + N S + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLKQTLTAQEEFITAPGYSTDPLEEQN-SVVPGLLHKYLNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL YI   S++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQVALDYIAAHSELDEIIFSGGDPLMAKDYELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L+  L+++   V +  H NH  E  +   AA+ R
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDGLVSRLEQSRLQVLLVNHINHANEIDDAFRAAMVR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+G+ND+  +LA+L     +  + PYYLH  D   G +HF +T EE
Sbjct: 243 LRKAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVTDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++IV  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLD 336


>gi|152973019|ref|YP_001338165.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|150957868|gb|ABR79898.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 342

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 102/274 (37%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ +  +EE  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPNDPLLRQVLTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +GT    ++ + A+ YI    Q+ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYAENQGT---RRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I HV+ LR HSR+PIV P RI   L    + +   V +  H NH  E   E  AA++ 
Sbjct: 183 EAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAM 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+G+ND+ + LA+L     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   ISG   P    ++ G   K  +D
Sbjct: 303 AREIMRELLTLISGYMVPKLAREIGGEPSKTPLD 336


>gi|308048933|ref|YP_003912499.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica
           DSM 9799]
 gi|307631123|gb|ADN75425.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica
           DSM 9799]
          Length = 400

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/293 (33%), Positives = 173/293 (59%), Gaps = 4/293 (1%)

Query: 39  LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPL-KGIVHRYPDRI 97
           +TP +A L++ ++PN PI  Q++P+++E++I P E  D + +++  P    +VHRYP+R+
Sbjct: 85  ITPYVAQLMDKNDPNCPIRIQYVPEQDEMHIAPHEMGDQLAEDDMMPEGTSLVHRYPNRV 144

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L  + ++C  YCR C R+ MV S    V+       ++ Y+++  ++ +V+ +GGDPL+L
Sbjct: 145 LFLVHNICGAYCRHCTRKRMV-SDPLNVIDMARIRRSVEYLRDHPEVQDVLLSGGDPLLL 203

Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           +  +L ++L  +R  +  ++ILR  SR+    P R+ PEL+  L +  +   I    NHP
Sbjct: 204 TDSKLDEILSMIREARPDLKILRIGSRLLAQLPTRVTPELVDVLVK-NRVTLINTQVNHP 262

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E +   I   + L  AG++L +QSV++KG+NDD E++ +L+   V   I+PYY++  D 
Sbjct: 263 REITPLFIKHTTMLRRAGVMLGNQSVMIKGVNDDVEVMRDLVMDLVSNGIRPYYVYSMDP 322

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
           A G S F ++ +   +I   ++  +SG   P +I+D  GG GK+ +    +KK
Sbjct: 323 APGNSKFMVSYDRMLEIYHGIRGWVSGPAIPTFIVDGIGGLGKMPVQPEYVKK 375


>gi|224586177|ref|YP_002639976.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224470705|gb|ACN48535.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 342

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G++LL+QSVLL+G+ND+   LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHVGVMLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|289809541|ref|ZP_06540170.1| hypothetical protein Salmonellaentericaenterica_35962 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 337

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 62  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 120

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 121 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 178

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 179 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKL 238

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 239 RHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 298

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 299 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 331


>gi|161505162|ref|YP_001572274.1| hypothetical protein SARI_03299 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866509|gb|ABX23132.1| hypothetical protein SARI_03299 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 342

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 98/273 (35%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+P+V P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPVVIPARITNELVARFDQSRLQILLVNHTNHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
              G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAKTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMITDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|204926922|ref|ZP_03218124.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204323587|gb|EDZ08782.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|322615499|gb|EFY12419.1| hypothetical protein SEEM315_10044 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618559|gb|EFY15448.1| hypothetical protein SEEM971_10303 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622028|gb|EFY18878.1| hypothetical protein SEEM973_17977 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627100|gb|EFY23892.1| hypothetical protein SEEM974_00362 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631059|gb|EFY27823.1| hypothetical protein SEEM201_05188 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637722|gb|EFY34423.1| hypothetical protein SEEM202_03729 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642386|gb|EFY38990.1| hypothetical protein SEEM954_03902 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645647|gb|EFY42172.1| hypothetical protein SEEM054_18690 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650513|gb|EFY46921.1| hypothetical protein SEEM675_15304 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653465|gb|EFY49795.1| hypothetical protein SEEM965_03844 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659708|gb|EFY55951.1| hypothetical protein SEEM19N_08219 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662081|gb|EFY58297.1| hypothetical protein SEEM801_16251 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666170|gb|EFY62348.1| hypothetical protein SEEM507_03054 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672590|gb|EFY68701.1| hypothetical protein SEEM877_15409 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676020|gb|EFY72091.1| hypothetical protein SEEM867_14623 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680504|gb|EFY76542.1| hypothetical protein SEEM180_12388 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684602|gb|EFY80606.1| hypothetical protein SEEM600_17732 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192917|gb|EFZ78143.1| hypothetical protein SEEM581_21258 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197207|gb|EFZ82347.1| hypothetical protein SEEM501_11096 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201676|gb|EFZ86740.1| hypothetical protein SEEM460_21711 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206190|gb|EFZ91152.1| hypothetical protein SEEM020_11145 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213200|gb|EFZ98002.1| hypothetical protein SEEM6152_12673 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215572|gb|EGA00316.1| hypothetical protein SEEM0077_07868 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219558|gb|EGA04043.1| hypothetical protein SEEM0047_21028 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323227861|gb|EGA12015.1| hypothetical protein SEEM0055_19496 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229030|gb|EGA13159.1| hypothetical protein SEEM0052_05250 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236358|gb|EGA20434.1| hypothetical protein SEEM3312_18736 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237522|gb|EGA21583.1| hypothetical protein SEEM5258_19717 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241812|gb|EGA25841.1| hypothetical protein SEEM1156_12637 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248039|gb|EGA31976.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323254629|gb|EGA38440.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258311|gb|EGA41988.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259588|gb|EGA43222.1| hypothetical protein SEEM8284_10232 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265861|gb|EGA49357.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270305|gb|EGA53753.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 342

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G+ LL+QSVLL+G+ND+   LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|16763155|ref|NP_458772.1| hypothetical protein STY4693 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29144634|ref|NP_807976.1| hypothetical protein t4385 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213621858|ref|ZP_03374641.1| hypothetical protein SentesTyp_31779 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648405|ref|ZP_03378458.1| hypothetical protein SentesTy_14649 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865531|ref|ZP_03387650.1| hypothetical protein SentesT_37675 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|25305130|pir||AH1045 conserved hypothetical protein yjeK [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16505463|emb|CAD06813.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29140273|gb|AAO71836.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 342

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|213052305|ref|ZP_03345183.1| hypothetical protein Salmoneentericaenterica_04842 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213428698|ref|ZP_03361448.1| hypothetical protein SentesTyphi_26121 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
          Length = 342

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|253991228|ref|YP_003042584.1| hypothetical protein PAU_03754 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782678|emb|CAQ85842.1| conserved hypothetical Protein [Photorhabdus asymbiotica]
          Length = 342

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/274 (37%), Positives = 153/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +PNDP+  Q I   EE NI+P    DP+ D   S + G++H+Y +R LL +   C V CR
Sbjct: 67  DPNDPLLLQVITAPEEFNIVPGFSADPL-DEQRSVVPGLLHKYRNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +  + + AL YIQ+  ++ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYEDNKG---NKHNWQQALNYIQQHPELDEIIFSGGDPLMAKDHELDWLISNL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR H+R+P+V P RI   L   L ++   V +  H NH  E  +    ++  
Sbjct: 183 EQISHIKRLRIHTRLPVVIPARITTTLCNRLAQSRLQVIMVTHINHENEIDQSLRNSMML 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L +AGI LL+QSVLL+G+N+ P+ILANL     +  I PYY+H  D   G +HF ++ EE
Sbjct: 243 LKHAGITLLNQSVLLRGVNNHPDILANLSNALFDAGILPYYIHVLDKVQGAAHFMVSDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + I+  L  K+SG   P    ++ G   K  +D
Sbjct: 303 ARGIIRELLTKVSGYLVPRLAREIGGESSKTPLD 336


>gi|168263313|ref|ZP_02685286.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|205348035|gb|EDZ34666.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 342

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G+ LL+QSVLL+G+ND+   LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|87118912|ref|ZP_01074811.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121]
 gi|86166546|gb|EAQ67812.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121]
          Length = 351

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 149/270 (55%), Gaps = 2/270 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           N NDP+ RQ +P  EE+  +     DP+ + +H+P K +VH+Y  RIL+     C + CR
Sbjct: 74  NLNDPLLRQILPIDEEMKQVKGYVTDPLAELDHNPKKALVHKYSSRILVITSGSCAINCR 133

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    +     L+  + ++ L+YIQ   QI EVI +GGDPL++  K+L +++  L 
Sbjct: 134 YCFRRHFPYANNH--LAPAEWDSLLSYIQTHPQINEVILSGGDPLMMKDKQLSQLISRLE 191

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            +  ++ LR H+R+PIV P RIN EL+    +    V + +H NH  E   + I A S+L
Sbjct: 192 ALPQLKRLRIHTRLPIVIPSRINNELLNWASQTRLKVIMVLHINHANEIDGKVIEACSKL 251

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
           A  G+ LL+Q V+LK +ND  E    L     +  I PYY+   D   G SHF +TI++ 
Sbjct: 252 AKIGVRLLNQGVILKNVNDTAEAQIALSEALFDADILPYYMFTLDPVEGASHFDITIDQA 311

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           Q+++  +   + G   P    ++PG   K 
Sbjct: 312 QQLMGQVAANLPGYLVPKLAKEIPGKTAKT 341


>gi|165919300|ref|ZP_02219386.1| KamA family protein [Coxiella burnetii RSA 334]
 gi|165917023|gb|EDR35627.1| KamA family protein [Coxiella burnetii RSA 334]
          Length = 342

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + +++  +L+N   +  + +     +++++++ +       +   NPNDP+  Q +PQ  
Sbjct: 12  RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQILPQAH 71

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P    DP+ +   + + G++H+Y  R+L+ L   C V+CR+CFRR     Q    
Sbjct: 72  ELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQNTP- 130

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
                      Y++  S I EVI +GGDPL++  + L   +  ++ I  ++ LR H+R+P
Sbjct: 131 -GRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIHTRLP 189

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           IV P+RI  EL+  L        + IH NHP E ++  I A+  L  + + LL+QSVLLK
Sbjct: 190 IVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQSVLLK 249

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
            +NDD + L +L     +  + PYYLH  D   G +HF ++ ++ Q  +A + + + G  
Sbjct: 250 NVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMKHLPGYL 309

Query: 306 QPFYILDLPGGYGKVKI 322
            P +I ++PG   K  +
Sbjct: 310 VPKFIREIPGALSKTPL 326


>gi|227326240|ref|ZP_03830264.1| hypothetical protein PcarcW_02548 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 335

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 158/290 (54%), Gaps = 5/290 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A  +   NP+DP+  Q +  +EE    P    DP+ D  HS + G++H+Y 
Sbjct: 36  FALRVPRAFAARMQKGNPDDPLLLQVLTAREEFIATPGFTHDPL-DEQHSVVPGLLHKYH 94

Query: 95  DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           +R LL +   C V CR+CFRR       +G   +  +   AL YI++ S++ E+IF+GGD
Sbjct: 95  NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHSELDEIIFSGGD 151

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+     L  ++  L +I H++ LR HSR+P+V P RI   L   L  +   V +  H 
Sbjct: 152 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 211

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E   +   +++RL  AG+ LL+QSVLL+G+ND+ E LA L     +  I PYYLH 
Sbjct: 212 NHPQEIDPDLTQSMARLRRAGVTLLNQSVLLRGVNDNAETLARLSNALFDAGILPYYLHV 271

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            D   G +HF +   E + +V +L +K+SG   P    ++ G   K  +D
Sbjct: 272 LDKVQGAAHFLVDDNEARVLVKALLKKVSGYLVPRLAREIGGEASKTPLD 321


>gi|168237064|ref|ZP_02662122.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194737300|ref|YP_002117279.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194712802|gb|ACF92023.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197290014|gb|EDY29373.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 342

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSHLQILLVNHINHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G+ LL+QSVLL+G+ND+   LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|161617604|ref|YP_001591569.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553577|ref|ZP_02347326.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|168822537|ref|ZP_02834537.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194444516|ref|YP_002043593.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|200386594|ref|ZP_03213206.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205355095|ref|YP_002228896.1| hypothetical protein SG4176 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207859482|ref|YP_002246133.1| hypothetical protein SEN4103 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|161366968|gb|ABX70736.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403179|gb|ACF63401.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|199603692|gb|EDZ02237.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205274876|emb|CAR39942.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205322004|gb|EDZ09843.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205341061|gb|EDZ27825.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|206711285|emb|CAR35663.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|320088762|emb|CBY98520.1| L-lysine 2,3-aminomutase LAM; KAM [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|326630252|gb|EGE36595.1| hypothetical protein SG9_4262 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 342

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G+ LL+QSVLL+G+ND+   LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|328675885|gb|AEB28560.1| Lysine 2,3-aminomutase [Francisella cf. novicida 3523]
          Length = 328

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 98/296 (33%), Positives = 158/296 (53%), Gaps = 4/296 (1%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           +++  + + +    AN I   N NDP+ +Q +P  +E  I      DP+ + N++ + G+
Sbjct: 36  DVTKSFKMIVPKSFANRIQKGNINDPLLKQVLPIVDEEVIDQAYSSDPLDEKNYNKVPGL 95

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           +H+Y  R+LL     C V+CR+CFR+E     K  +   KD   A  YI     I EVI 
Sbjct: 96  LHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKDNIPGRKDWLQAFEYIANDQSIEEVIL 153

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+V P+RI  +L++ L E      +
Sbjct: 154 SGGDPLLNNDEVLEFFIENIQQIAHIKRLRIHSRIPVVLPERITTKLLRVLSEHRLDTIL 213

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
            IH NHP E  +     +  +   GII+L+QS LLK INDD  +L  L    +  ++ PY
Sbjct: 214 VIHVNHPNELDDNISEVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPY 273

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           Y+H  D  +GT H+   ++  + I+  L E  SG   P    ++PG   K  +  H
Sbjct: 274 YIHSLDTVSGTKHY--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFH 327


>gi|153206246|ref|ZP_01945509.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177']
 gi|154706630|ref|YP_001423526.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111]
 gi|212217836|ref|YP_002304623.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154]
 gi|120577376|gb|EAX34000.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177']
 gi|154355916|gb|ABS77378.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111]
 gi|212012098|gb|ACJ19478.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154]
          Length = 342

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + +++  +L+N   +  + +     +++++++ +       +   NPNDP+  Q +PQ  
Sbjct: 12  RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQILPQAH 71

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P    DP+ +   + + G++H+Y  R+L+ L   C V+CR+CFRR     Q    
Sbjct: 72  ELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQNTP- 130

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
                      Y++  S I EVI +GGDPL++  + L   +  ++ I  ++ LR H+R+P
Sbjct: 131 -GRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIHTRLP 189

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           IV P+RI  EL+  L        + IH NHP E ++  I A+  L  + + LL+QSVLLK
Sbjct: 190 IVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQSVLLK 249

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
            +NDD + L +L     +  + PYYLH  D   G +HF ++ ++ Q  +A + + + G  
Sbjct: 250 NVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMKHLPGYL 309

Query: 306 QPFYILDLPGGYGKVKI 322
            P ++ ++PG   K  +
Sbjct: 310 VPKFVREIPGALSKTPL 326


>gi|56416128|ref|YP_153203.1| hypothetical protein SPA4150 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197365054|ref|YP_002144691.1| hypothetical protein SSPA3854 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56130385|gb|AAV79891.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197096531|emb|CAR62140.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 342

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAVHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 HHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|198243525|ref|YP_002218222.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|197938041|gb|ACH75374.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|326626024|gb|EGE32369.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 342

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G+ LL+QSVLL+G+ND+   LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|261342808|ref|ZP_05970666.1| KamA family protein [Enterobacter cancerogenus ATCC 35316]
 gi|288314849|gb|EFC53787.1| KamA family protein [Enterobacter cancerogenus ATCC 35316]
          Length = 342

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 102/274 (37%), Positives = 154/274 (56%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ +Q +  ++E    P    DP+ + N S + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLKQTLTSQDEFVTAPGYSTDPLEEQN-SVVPGLLHKYLNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYADNQG---NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L+  L ++   V +  H NH  E  +E  AA+ R
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDGLVSRLAQSRLQVLLVNHINHANEIDDEFRAAMIR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+G+ND+  +LA+L     +  + PYYLH  D   G +HF +T EE
Sbjct: 243 LRQAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVTDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++IV  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLD 336


>gi|257455683|ref|ZP_05620912.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60]
 gi|257446966|gb|EEV21980.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60]
          Length = 333

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 2/274 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           NDP+ +Q +P  +E   +     DP+ + + +P+KGI+H+Y  R+L+ +   C V CR+C
Sbjct: 61  NDPLLKQVLPTFQETVQVTGFVTDPLDEQHANPVKGIIHKYASRVLIPVTGACVVNCRYC 120

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FR+         + +  D +A  AYI     + EVI +GGDPL LS++RL ++  TL  +
Sbjct: 121 FRQHF--DYHENLPTHNDWQAISAYITAHPAVNEVILSGGDPLSLSNRRLLEIFTTLEAL 178

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
             V  +R H+RVP++ P+R++  L+     +   + + IHANHP E  +E    + +   
Sbjct: 179 PQVHTIRIHTRVPVMIPERLDEPLLARFANSRCHIVMVIHANHPNEIDQETQIFLGKAKK 238

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AG+ LL+Q+VLLK INDD   LA+L     +  + PYYLH  D  AG SHF ++ E+   
Sbjct: 239 AGVTLLNQTVLLKSINDDANTLASLNEKLWQAGVLPYYLHVLDKVAGASHFYISDEQAVA 298

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +   L  K +G   P  + +LP    K  +D +N
Sbjct: 299 LYWELLAKCAGYLVPKLVRELPNKPFKTPVDLYN 332


>gi|212211887|ref|YP_002302823.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212]
 gi|212010297|gb|ACJ17678.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212]
          Length = 342

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + +++  +L+N   +  + +     +++++++ +       +   NPNDP+  Q +PQ  
Sbjct: 12  RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQILPQAH 71

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P    DP+ +   + + G++H+Y  R+L+ L   C V+CR+CFRR     Q    
Sbjct: 72  ELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQNTP- 130

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
                      Y++  S I EVI +GGDPL++  + L   +  ++ I  ++ LR H+R+P
Sbjct: 131 -GRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIHTRLP 189

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           IV P+RI  EL+  L        + IH NHP E ++  I A+  L  + + LL+QSVLLK
Sbjct: 190 IVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQSVLLK 249

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
            +NDD + L +L     +  + PYYLH  D   G +HF ++ ++ Q  +A + + + G  
Sbjct: 250 NVNDDSKALIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMKHLPGYL 309

Query: 306 QPFYILDLPGGYGKVKI 322
            P ++ ++PG   K  +
Sbjct: 310 VPKFVREIPGALSKTPL 326


>gi|320539691|ref|ZP_08039355.1| putative lysine aminomutase [Serratia symbiotica str. Tucson]
 gi|320030303|gb|EFW12318.1| putative lysine aminomutase [Serratia symbiotica str. Tucson]
          Length = 342

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 167/306 (54%), Gaps = 5/306 (1%)

Query: 24  QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
           ++ + ++    +++ +    A  + P + NDP+ RQ +  KEE    P    DP+ D   
Sbjct: 40  ELSQGRDARRLFALRVPRAFAARMRPGDANDPLLRQVLTAKEEFINAPGFTTDPL-DEQR 98

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKS 142
           S + G++H+Y +R LL +   C + CR+CFRR       +G   +  +   AL YI++  
Sbjct: 99  SVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHP 155

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           ++ E+IF+GGDPL+     L  ++  L  I H++ LR H+R+P+V P RI PEL + L  
Sbjct: 156 ELDEIIFSGGDPLMAKDHELGWLIGELAAIPHLKRLRIHTRLPVVIPARITPELCRWLSA 215

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           +   V +  H NH  E   E  AA+++L  AG+ LL+QSVL++ INDD + LA L     
Sbjct: 216 SRLQVLMITHINHANEIDRELQAAMAQLRLAGVTLLNQSVLMRRINDDADTLAALSNALF 275

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           +  I PYY+H  D   G +HF ++ +E + I+ +L  K+SG   P    ++ G   K  +
Sbjct: 276 DAGILPYYIHMLDKVQGATHFMVSDDEARTIMQALLSKVSGYLVPRLTREVGGKPSKTPL 335

Query: 323 DTHNIK 328
           D H I+
Sbjct: 336 DLHLIQ 341


>gi|146309997|ref|YP_001175071.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638]
 gi|145316873|gb|ABP59020.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638]
          Length = 342

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 163/306 (53%), Gaps = 3/306 (0%)

Query: 18  NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
           N+   E +   +E    +++ +       +   NPNDP+ +Q +  K+E    P    DP
Sbjct: 34  NIDSDENMLAGREAKRLFALRVPRAFVARMEKGNPNDPLLKQVLTSKDEFVTAPGFSTDP 93

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
           + + N S + G++H+Y +R LL +   C V CR+CFRR    ++     + ++ + AL Y
Sbjct: 94  LEEQN-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENPG--NKRNWQVALDY 150

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
           I    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PIV P RI   L+
Sbjct: 151 IAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDGLV 210

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
                +   + +  H NH  E  E   +A+ RL NAG+ LL+QSVLL+G+ND+ + LA+L
Sbjct: 211 SRFAASPLQILLVNHINHANEIDETFRSAMMRLRNAGVTLLNQSVLLRGVNDNAQTLADL 270

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
                +  + PYYLH  D   G +HF ++ EE ++IV  L   +SG   P    ++ G  
Sbjct: 271 SNALFDASVMPYYLHVLDRVQGAAHFMVSDEEARQIVRELLTLVSGYMVPKLAREIGGEP 330

Query: 318 GKVKID 323
            K  +D
Sbjct: 331 SKTPLD 336


>gi|168467049|ref|ZP_02700897.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|195630645|gb|EDX49257.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
          Length = 342

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G+ LL+QSVLL+G+ND+   LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNALTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|253690127|ref|YP_003019317.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251756705|gb|ACT14781.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 351

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 156/290 (53%), Gaps = 5/290 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A  +   NP+DP+  Q +  +EE    P    DP+ D  HS + G++H+Y 
Sbjct: 51  FALRVPRAFAARMQKGNPDDPLLLQVLTAREEFTATPGFTHDPL-DEQHSVVPGLLHKYH 109

Query: 95  DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           +R LL +   C V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGD
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEIIFSGGD 166

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+     L  ++  L +I H++ LR HSR+P+V P RI   L   L  +   V +  H 
Sbjct: 167 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 226

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E   +   A++RL  AG+ LL+QSVLL+G+ND  + LA L     +  I PYYLH 
Sbjct: 227 NHPQEIDTDLTQAMARLRRAGVTLLNQSVLLRGVNDSADTLAQLSNALFDAGILPYYLHV 286

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            D   G +HF +   E + +V +L +K+SG   P    ++ G   K  +D
Sbjct: 287 LDKVQGAAHFLVDDNEARILVKALLKKVSGYLVPRLAREIGGEASKTPLD 336


>gi|15606739|ref|NP_214119.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5]
 gi|4033496|sp|O67554|Y1632_AQUAE RecName: Full=Uncharacterized KamA family protein aq_1632
 gi|2983974|gb|AAC07521.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5]
          Length = 374

 Score =  182 bits (463), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 159/282 (56%), Gaps = 10/282 (3%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           +++  ++        +LIN  NPNDPI R  IP  EEL +    + D   ++ +  + G+
Sbjct: 27  KVTEKFAFRTNTYYNSLINWDNPNDPIRRIVIPTTEELEVWG--KLDASNESKYMKVHGL 84

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            H+YPD  LL +  VC +YCRFCFR+ +  +    V  ++D    L YI+   +I  V+ 
Sbjct: 85  EHKYPDTALLLVTDVCGIYCRFCFRKRLFMNDNDEV--ARDVSEGLEYIRNHPEINNVLL 142

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK----EA 203
           TGGDPLIL+  +L+K+LK L  I HV+I+R  S++  V+P R+  +P+L++  +    E 
Sbjct: 143 TGGDPLILATFKLEKILKALAEIPHVRIVRIGSKMLAVNPFRVLDDPKLLELFEWFNTET 202

Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
           GK +Y+  H NHP E ++EA  A+  +   G  L +Q+ +LKGINDD E L  L+     
Sbjct: 203 GKKLYLMNHFNHPRELTKEARKAVELVQKTGTTLTNQTPILKGINDDFETLKTLLEELSF 262

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           + + PYY+      AG   +   IEE   +V +++ ++SGL 
Sbjct: 263 IGVPPYYVFQCRPTAGNKAYSTPIEETIDLVEAVRAEVSGLA 304


>gi|238912798|ref|ZP_04656635.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 342

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G+ LL+QSVLL+G+ND+   LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|157368658|ref|YP_001476647.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans
           568]
 gi|157320422|gb|ABV39519.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans
           568]
          Length = 342

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/280 (36%), Positives = 156/280 (55%), Gaps = 5/280 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P + NDP+ RQ +   EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 63  MQPGDANDPLLRQVLTASEEFINAPGFTTDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 121

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGDPL+     L  +
Sbjct: 122 VNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWL 178

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           +  L  I+H++ LR H+R+P+V P RI PEL + L  +   V +  H NH  E   E  A
Sbjct: 179 IGELEAIEHLKRLRIHTRLPVVIPARITPELCRRLSASRLQVLMVTHINHANEIDRELQA 238

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           ++++L  AG+ LL+QSVLL+GINDD + LA L     +  I PYY+H  D   G +HF +
Sbjct: 239 SMAQLRLAGVTLLNQSVLLRGINDDADTLAALSNALFDAGILPYYIHVLDKVQGAAHFMV 298

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           + +E + I+ +L  KISG   P    ++ G   K  +D H
Sbjct: 299 SDDEARTIMQALLGKISGYMVPRLTREVGGKPSKTPLDLH 338


>gi|16767582|ref|NP_463197.1| aminomutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167994785|ref|ZP_02575876.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168244887|ref|ZP_02669819.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194447368|ref|YP_002048381.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|197248033|ref|YP_002149252.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197263424|ref|ZP_03163498.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|16422895|gb|AAL23156.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|194405672|gb|ACF65891.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|197211736|gb|ACH49133.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197241679|gb|EDY24299.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|205327405|gb|EDZ14169.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205336322|gb|EDZ23086.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|261249429|emb|CBG27293.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267996666|gb|ACY91551.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301160825|emb|CBW20356.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312915434|dbj|BAJ39408.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321223208|gb|EFX48278.1| Lysine 2,3-aminomutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|323132674|gb|ADX20104.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|332991147|gb|AEF10130.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 342

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            IKHV+ LR HSR+PIV P RI  EL+    ++   + +  H NH  E  E    A+ +L
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            + G+ LL+QSVLL+G+ND+   LANL     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336


>gi|2754809|gb|AAC04238.1| 37.5 kDa protein [Buchnera aphidicola (Myzus persicae)]
          Length = 337

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 99/263 (37%), Positives = 149/263 (56%), Gaps = 2/263 (0%)

Query: 50  HNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           ++P DP+  Q I    E    P+  +DPI +  H  L G++H+Y DR+LL +   C ++C
Sbjct: 66  NDPQDPLLLQVIINNREFLNSPKYVKDPIKEKKHIILPGLLHKYKDRVLLFVKTNCAIHC 125

Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           R+CFR+     +     S  +   +L YIQ+   + EVIF+GGDPLI     L  ++ +L
Sbjct: 126 RYCFRKYFPYEKNQG--SKINWIKSLEYIQKNKNLNEVIFSGGDPLIAKDHELLWLITSL 183

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR H+R+PIV P RI   L +   ++   + I  H NHP E ++    ++ +
Sbjct: 184 SKINHIKRLRIHTRLPIVIPNRITSNLCEIFIQSSLKIIIVTHINHPQEINKNLSNSLLK 243

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  +G+I+L+QSVLLK INDDP ILA L     +  I PYYLH  D   GT HF ++ ++
Sbjct: 244 LKESGVIMLNQSVLLKNINDDPIILAELSNLLCDNNILPYYLHILDTVKGTMHFSVSSKK 303

Query: 290 GQKIVASLKEKISGLCQPFYILD 312
            + I+ SL + ISG   P  + D
Sbjct: 304 AKSIMKSLIKMISGYLIPRLVQD 326


>gi|270264978|ref|ZP_06193241.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13]
 gi|270040912|gb|EFA14013.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13]
          Length = 342

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 162/298 (54%), Gaps = 5/298 (1%)

Query: 29  KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
           +E    +++ +    A  + P + NDP+ RQ +   EE    P    DP+ D   S + G
Sbjct: 45  REARRLFALRVPRAFAARMRPGDANDPLLRQVLTASEEFINAPGFTTDPL-DEQRSVVPG 103

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           ++H+Y +R LL +   C V CR+CFRR       +G   +  +   AL YI++  ++ E+
Sbjct: 104 LLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEI 160

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           IF+GGDPL+     L  ++  L  I H++ LR H+R+P+V P RI PEL + L  +   V
Sbjct: 161 IFSGGDPLMAKDHELDWLIGELEAIAHLKRLRIHTRLPVVIPARITPELCRRLSASRLQV 220

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
            +  H NH  E   E  A++++L  AG+ LL+QSVLL+GIND+ + LA L     +  I 
Sbjct: 221 LMVTHINHANEIDRELQASMAQLRLAGVTLLNQSVLLRGINDNADTLAALSNALFDAGIL 280

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           PYY+H  D   G +HF ++ +E + I+ +L  K+SG   P    ++ G   K  +D H
Sbjct: 281 PYYIHVLDKVQGAAHFMVSDDEARAIMQALLSKVSGYMVPRLTREVGGKPSKTPLDLH 338


>gi|312882797|ref|ZP_07742531.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369581|gb|EFP97099.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 340

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 156/276 (56%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ +P  +E NI PE   DP+ + ++  + G++H+Y +R+L+ +   C + CR
Sbjct: 67  NPNDPLLRQVLPLIDEFNIHPEYSSDPLEEQSNE-IPGLLHKYHNRVLMIVKGGCAINCR 125

Query: 111 FCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR    S+ KGT       + +L YI    +I EVI +GGDPL+     L+ +   +
Sbjct: 126 YCFRRHFPYSENKGT---KSVWQQSLRYISLHKEIDEVILSGGDPLMAKDDELRWLFSEI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I HV+ LR HSR+P+V P RI  ELI+ ++       +  H NH  E + E   A+ +
Sbjct: 183 AKISHVKRLRIHSRLPVVIPARITSELIELIENNRLTTILVTHVNHANEINIELKQALQK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  A + LL+Q V+LKG+ND+ +    L +T  +  + PYY+H  D   G +HF ++ + 
Sbjct: 243 LKAANVTLLNQGVMLKGVNDNADAQVQLSQTLFDAGVMPYYMHVLDKVQGATHFFISDQR 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 AREIMAELIERVSGYLVPKLTREVGGRKSKTPLDLH 338


>gi|29655147|ref|NP_820839.1| radical SAM domain-containing protein [Coxiella burnetii RSA 493]
 gi|161831507|ref|YP_001597682.1| KamA family protein [Coxiella burnetii RSA 331]
 gi|29542416|gb|AAO91353.1| lysine 2,3-aminomutase [Coxiella burnetii RSA 493]
 gi|161763374|gb|ABX79016.1| KamA family protein [Coxiella burnetii RSA 331]
          Length = 342

 Score =  182 bits (461), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + +++  +L+N   +  + +     +++++++ +       +   NPNDP+  Q +PQ  
Sbjct: 12  RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQILPQAH 71

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P    DP+ +   + + G++H+Y  R+L+ L   C V+CR+CFRR     Q    
Sbjct: 72  ELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQNTP- 130

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
                      Y++  S I EVI +GGDPL++  + L   +  ++ I  ++ LR H+R+P
Sbjct: 131 -GRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIHTRLP 189

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           IV P+RI  EL+  L        + IH NHP E ++  I A+  L  + + LL+QSVLLK
Sbjct: 190 IVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQSVLLK 249

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
            +NDD + L +L     +  + PYYLH  D   G +HF ++ ++ Q  +A + + + G  
Sbjct: 250 NVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMIKHLPGYL 309

Query: 306 QPFYILDLPGGYGKVKI 322
            P ++ ++PG   K  +
Sbjct: 310 VPKFVREIPGALSKTPL 326


>gi|320537569|ref|ZP_08037507.1| KamA family protein [Treponema phagedenis F0421]
 gi|320145571|gb|EFW37249.1| KamA family protein [Treponema phagedenis F0421]
          Length = 342

 Score =  182 bits (461), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 104/298 (34%), Positives = 158/298 (53%), Gaps = 7/298 (2%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           + RQ    + E   LP E  DP+G++ +     +VH+Y +R+L+     C  YCR+CFRR
Sbjct: 46  LRRQVFAAETEKISLPYESADPLGESRYCVTPFLVHQYTNRVLMLTSGRCLSYCRYCFRR 105

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
                ++G +    + E    Y+++   I E++ +GGDP+  +  +L+ +LK LR     
Sbjct: 106 GFTARRQGWI-PDTEIEKITDYLKQNPDIKEILVSGGDPMSGTLGQLEALLKRLRQTSPE 164

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
            ++R  +R PI  P+    EL+Q LK   KP++I  H NHP E   E   AI    NAG+
Sbjct: 165 LLIRLCTRAPIFAPELFTEELLQLLKSM-KPLWIIPHINHPAELGFEQKKAIDSCINAGL 223

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
            + SQSVLL+G+N+  E L  L  T V + +KP YL   DLA GT+ FR+ + +   I  
Sbjct: 224 PMQSQSVLLRGVNNSVETLCALFHTLVCMGVKPGYLFQMDLAPGTAEFRVPLSQALGIWR 283

Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHN-----IKKVGNGSYCITDHHNIVHDYP 348
            L++K+SGL  P + +DLPGG GK  +         +KK    S+        V+ YP
Sbjct: 284 ELRKKLSGLSLPQFAVDLPGGGGKFPLSILALYDTIVKKDDADSFSALGLDGKVYTYP 341


>gi|21231711|ref|NP_637628.1| hypothetical protein XCC2273 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768163|ref|YP_242925.1| hypothetical protein XC_1842 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991300|ref|YP_001903310.1| Putative radical SAM superfamily protein [Xanthomonas campestris
           pv. campestris str. B100]
 gi|21113412|gb|AAM41552.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573495|gb|AAY48905.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733060|emb|CAP51258.1| Putative radical SAM superfamily protein [Xanthomonas campestris
           pv. campestris]
          Length = 342

 Score =  182 bits (461), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 153/291 (52%), Gaps = 2/291 (0%)

Query: 29  KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
           ++ +  +++ +       + P +  DP+ RQ +P   E+ ++P    D +GD       G
Sbjct: 51  EDAAAQFAVRVPRSFVARMRPGDLTDPLLRQVLPLDAEMRVVPGFALDAVGDGAARTTTG 110

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           ++ +Y  R LL     C V+CR+CFRR    +++    +      A+A I     I EV+
Sbjct: 111 VIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEETA--ARDGWREAVAAIAADPDIDEVL 168

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            +GGDPL L+  +L ++   L  I H++ LR HSR+P+V P+R++  L+  L+    PV 
Sbjct: 169 LSGGDPLSLTTPKLAELTDALAAIPHLKRLRIHSRLPVVLPERVDAPLLAWLRSLPWPVA 228

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
             IHANH  EF  E  AA+  L  AG  LL+Q+VLL+G+ND  + LA L        + P
Sbjct: 229 FVIHANHANEFDAEVDAALHALRGAGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLP 288

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
           YYLH  D  AG +HF +     + + A L  ++SG   P  + ++PG  GK
Sbjct: 289 YYLHQLDRVAGVAHFEVDDARARALHAELATRLSGYLVPRLVREIPGDTGK 339


>gi|88812696|ref|ZP_01127943.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231]
 gi|88790112|gb|EAR21232.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231]
          Length = 339

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 150/269 (55%), Gaps = 2/269 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           N  DP+ RQ +P   EL+  P    DP+GD   S   G++H+Y  R+LL     C + CR
Sbjct: 68  NLEDPLLRQVLPLTAELDPAPGFVTDPVGDLGASKGAGVLHKYHGRVLLITTGACAINCR 127

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    +Q     ++    +AL YI +++++ EVI +GGDPL L+ +RL +++  L 
Sbjct: 128 YCFRRHFPYAQANA--AAGQWHSALRYIAQRTEVEEVILSGGDPLTLADRRLAQLVTQLV 185

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR H+R+P+V P R+  EL++    +     + +H NH  E      +A+ RL
Sbjct: 186 DIPHIRRLRIHTRLPVVLPARVTDELVEWFAGSRLQPIMVLHTNHANELDATVTSAVKRL 245

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ +L+Q+VLL+G+ND+   L  L +   +  I PYYLH  D  AG  HF +T +  
Sbjct: 246 REAGVTMLNQTVLLRGVNDEAMALTALHQRLFDSGILPYYLHLLDRVAGARHFAITQDRA 305

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319
           +++   +  ++ G   P  + ++ G  GK
Sbjct: 306 RELHRQMARRLPGYLVPRLVQEIEGAPGK 334


>gi|77919981|ref|YP_357796.1| hypothetical protein Pcar_2387 [Pelobacter carbinolicus DSM 2380]
 gi|77546064|gb|ABA89626.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
          Length = 376

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 169/306 (55%), Gaps = 9/306 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K +T+   +   N +++    ++K +   Y+        +LI+ ++P DPI R  IP  +
Sbjct: 5   KYITNIDQIPELNRLEEHHRQKLKAVQKRYAFRSNGYYQSLIDWNDPKDPIRRIVIPSAD 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P    D  G++ +S   G+ H+YPD  +L +  VC   CRFCFR+ +       V
Sbjct: 65  ELQ--PWGELDASGESLYSKAPGLEHKYPDTAVLLVSDVCGALCRFCFRKRLFMDDNQEV 122

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
             ++D  A LAYI++ ++I  V+ TGGDPL+LS ++L ++++ LR I+HV+I+R  S++P
Sbjct: 123 --ARDVSAGLAYIRKHTEINNVLVTGGDPLLLSTRKLTEIIEQLRAIEHVRIIRIGSKMP 180

Query: 186 IVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
             +P RI  +PEL++  K   +P   +Y+    NHP E + EA  A+  +  +G+ ++ Q
Sbjct: 181 AFNPFRILDDPELLEMFKAHSQPNRRIYLMAQFNHPRELTSEARRALDLVLQSGVTVMHQ 240

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           + +++G+ND  E+L  L      + + PYY+       G + + + IEEG  I A   + 
Sbjct: 241 TPMIRGVNDSAEVLTELFNELSYMGVAPYYVFQCRPTEGNAAYTVPIEEGYAIFAKAHQN 300

Query: 301 ISGLCQ 306
            SGL +
Sbjct: 301 CSGLAR 306


>gi|268323521|emb|CBH37109.1| conserved hypothetical protein [uncultured archaeon]
          Length = 366

 Score =  182 bits (461), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 174/301 (57%), Gaps = 11/301 (3%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           E   +++EI   + + +T    +LI+ ++PNDPI R  +P +EELN+L     D  G+  
Sbjct: 26  EMEQQLQEIVAIHPMRITQYYMSLIDKNDPNDPIRRMTVPSEEELNLLGSY--DTSGERE 83

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           ++ + G+ H+Y    L+   + C  YCR+CFR+ +VG     +L   +   A+ YI+   
Sbjct: 84  NTMMPGLQHKYAQTALILATNRCATYCRYCFRKRLVGLPTEEILQRFND--AVKYIENHE 141

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL 200
           +I  V+ +GGDP +LS   +++ L+ L  I H+  +RF +RVP+  P RI  + EL+  L
Sbjct: 142 EINNVLISGGDPFVLSTGVVKEFLEKLSTISHLDFIRFGTRVPVTFPDRIIEDDELLTLL 201

Query: 201 K---EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
           +   +  + +Y+    NHP E +++A  A+SRL  +G+IL +Q+VLLKG+NDDPE LA L
Sbjct: 202 EKNSQENRRIYVVTQFNHPREITQKATDAVSRLIRSGVILDNQTVLLKGVNDDPETLAEL 261

Query: 258 MRTFVELRIKPYYLHHPD-LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPG 315
               V + + PYY+     +    ++F++ + +G +IV   K+K++G  + F YI+    
Sbjct: 262 QNKLVSIGVNPYYVFQCRPVKRVKNNFQVPLYKGYEIVDRAKKKLNGHSKRFKYIMSHQT 321

Query: 316 G 316
           G
Sbjct: 322 G 322


>gi|260549729|ref|ZP_05823946.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624]
 gi|260407246|gb|EEX00722.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624]
          Length = 338

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 102/276 (36%), Positives = 148/276 (53%), Gaps = 2/276 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           +N  NP DP+  Q +P   EL   PE   DP+G+   + L G++H+Y  R LL L   C 
Sbjct: 59  MNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V+CR+CFRR      +  +  + D      YI+    I EVI +GGDPL LS+++L   L
Sbjct: 119 VHCRYCFRRHF--PYQENLPKNDDWLNIKNYIEANPDINEVILSGGDPLTLSNRKLALWL 176

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           + L  +K V+ILR HSRVPIV P RI+ ELI  LK +   + + +H+NH  E  +   + 
Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           +  L++  I +L+Q+VLLKG+ND  + L +L     E R+ PYYLH  D   G  HF L 
Sbjct: 237 LMELSSHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLM 296

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             E   I   +   + G   P  + ++ G   K  +
Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|120555694|ref|YP_960045.1| lysine 2,3-aminomutase YodO family protein [Marinobacter aquaeolei
           VT8]
 gi|120325543|gb|ABM19858.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8]
          Length = 355

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 148/278 (53%), Gaps = 4/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   NP+DP+ RQ +P  +E  I P+   DP+ + +     G++ +Y  R LL +   C 
Sbjct: 78  IEQGNPDDPLLRQVLPVAQEAEIHPDFVSDPLEEASAIQTTGLIRKYTSRALLMITGQCA 137

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           + CR+CFRR    G  +   L  +D    +  +    +I EVIF+GGDPL ++ + L + 
Sbjct: 138 INCRYCFRRHFPYGDHR---LGPEDRRQVIDSLSASPEINEVIFSGGDPLAVNDRLLSQW 194

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
            + L  I H++ LR HSR+P+V PQR+   LI  L        + +H NHP E  +    
Sbjct: 195 AELLGDIPHLRRLRIHSRLPVVIPQRVCDSLIDWLSRTRLQKVLVVHVNHPAEIDQATRQ 254

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           A  RL+ AG+ LL+QSV+LKG+ND    L+ L  T  E  + PYYLH  D  +G  HF +
Sbjct: 255 AFRRLSEAGVTLLNQSVILKGVNDSSATLSALSETLFEAGVMPYYLHAFDPVSGARHFSV 314

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +  +  +IV  + E + G   P  + +LPG   K  +D
Sbjct: 315 SDTDAIRIVNEMLENLPGFLVPKLVRELPGRASKTPLD 352


>gi|190575198|ref|YP_001973043.1| putative methylase protein [Stenotrophomonas maltophilia K279a]
 gi|190013120|emb|CAQ46752.1| putative methylase protein [Stenotrophomonas maltophilia K279a]
          Length = 346

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 96/266 (36%), Positives = 144/266 (54%), Gaps = 4/266 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P DP+ RQ +P  EE+   P    D +GD       G++ +Y  R LL     C + CR
Sbjct: 77  DPADPLLRQVLPIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCR 136

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR    G++     +    + A+A I     I EVI +GGDPL L+  +L ++   L
Sbjct: 137 YCFRRHFDYGAENA---AKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDAL 193

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
           R I H++ LR H+R+PIV P+R++ EL+  L     P+ I +HANH  EF     AA++R
Sbjct: 194 RAIPHIRRLRIHTRLPIVLPERVDDELVSWLGSLPWPLAIVVHANHANEFDASVDAAMAR 253

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G  LL+Q+VLL+G+ND  + L +L        + PYYLH  D   G +HF +    
Sbjct: 254 LRGIGAQLLNQAVLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTR 313

Query: 290 GQKIVASLKEKISGLCQPFYILDLPG 315
            + ++A L  ++SG   P  + +LPG
Sbjct: 314 AKALIAGLTARLSGYLVPKLVRELPG 339


>gi|292490713|ref|YP_003526152.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus
           halophilus Nc4]
 gi|291579308|gb|ADE13765.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus
           halophilus Nc4]
          Length = 336

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 146/273 (53%), Gaps = 2/273 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +PNDP+ RQ  P   E  I P    DP+GD    P  G++ +Y  R+LL     C ++CR
Sbjct: 65  DPNDPLFRQVFPLIAEDQISPGFSADPVGDLAAMPAPGVLQKYAGRVLLVTTGACAIHCR 124

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    +      S    + AL YI +     EVI +GGDPL L+  RL ++++ L 
Sbjct: 125 YCFRRHFPYADHNPAPSQ--WQQALQYIAQNPSTQEVILSGGDPLTLTDNRLTELVQALA 182

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I HV+ LR H+R+P+V P+R++  L+Q L+       + IHANH  E  +    A+  L
Sbjct: 183 AISHVKRLRIHTRLPVVLPERVDSHLLQWLEHTSLQKVVVIHANHANELDDRVGEALEGL 242

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
           + AG  L +Q+VLL+GIND    L +L  +  +  + PYYLH  D   G +HF +     
Sbjct: 243 SRAGCRLFNQTVLLRGINDRVSALCDLSESLFDAGVIPYYLHLLDRVQGAAHFEVDTPTA 302

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           Q +  +L+ ++ G   P  + +L G   K+ ++
Sbjct: 303 QCLHRTLRARLPGYLVPLLVQELAGAPSKLPLE 335


>gi|157147882|ref|YP_001455201.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895]
 gi|157085087|gb|ABV14765.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895]
          Length = 342

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ +  ++E    P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPNDPLLRQVLTSQDEFVTAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYADNQG---NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L      +   + +  H NH  E  +    A++ 
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDGLAARFARSSLQILLVNHINHANEIDDTFRQAMTT 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L NAG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRNAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L  ++SG   P    ++ G   K  +D
Sbjct: 303 ARRIMRELLTRVSGYMVPRLAREIGGEPSKTPLD 336


>gi|295098305|emb|CBK87395.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 342

 Score =  181 bits (459), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/274 (36%), Positives = 153/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ +Q +  ++E    P    DP+ + N S + G++H+Y +R LL +   C V CR
Sbjct: 67  NPGDPLLKQTLTSQDEFITAPGYSTDPLEEQN-SVVPGLLHKYRNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L+  L+++   V +  H NH  E   +  AA++R
Sbjct: 183 ETIPHIKRLRIHSRLPIVIPARITDALVTRLEQSRLQVLLVNHINHANEIDADFRAAMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           +  AG+ LL+QSVLL+G+ND   +LA+L     +  + PYYLH  D   G +HF +T EE
Sbjct: 243 MRKAGVTLLNQSVLLRGVNDSARVLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVTDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            +KI+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARKIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336


>gi|222099542|ref|YP_002534110.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359]
 gi|221571932|gb|ACM22744.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359]
          Length = 365

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 163/289 (56%), Gaps = 9/289 (3%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           E+ +++K +   +          LIN  +P+DPI +  IP+++EL        D   + +
Sbjct: 18  EEKEKLKRVEERFRFRANSYYLGLINWSDPDDPIRKIIIPEEDELEEWGSL--DASSERS 75

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           ++  KG+ H+YPD  L  +  VC  +CRFCFR+ +  +    V+  +D    L YI+   
Sbjct: 76  YTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRSHK 133

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL 200
           +I  V+ TGGDPL+LS ++L+K++ +LR I HV I+R  S++P  +P RI  +PEL++ +
Sbjct: 134 EITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVHIIRIGSKIPAFNPYRIIDDPELLRMI 193

Query: 201 KEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
           ++     K +Y+    NH  E +EEAI A++ L +AG +L +Q+ LL+GIND PE L  L
Sbjct: 194 RKYSTKEKKIYVMTQFNHSKELTEEAIEAVNLLKDAGAVLCNQTPLLRGINDSPETLGEL 253

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +     + + PYY+      +G   F + IE+G +I       +SG+ +
Sbjct: 254 LDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEKGYEIFTKAISNLSGVAK 302


>gi|293417652|ref|ZP_06660274.1| kamA family protein yjeK [Escherichia coli B185]
 gi|291430370|gb|EFF03368.1| kamA family protein yjeK [Escherichia coli B185]
          Length = 342

 Score =  181 bits (459), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 153/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ I  ++E  I P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVITSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|227113817|ref|ZP_03827473.1| hypothetical protein PcarbP_12668 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 335

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 157/290 (54%), Gaps = 5/290 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A  +   NP+DP+  Q +  +EE    P    DP+ D  HS + G++H+Y 
Sbjct: 36  FALRVPRAFAARMQKGNPDDPLLLQVLTAREEFIATPGFTHDPL-DEQHSVVPGLLHKYH 94

Query: 95  DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           +R LL +   C V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGD
Sbjct: 95  NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEIIFSGGD 151

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+     L  ++  L +I H++ LR HSR+P+V P RI   L   L  +   V +  H 
Sbjct: 152 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 211

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E   +   +++RL  AG+ LL+QSVLL+G+ND+ E LA L     +  I PYYLH 
Sbjct: 212 NHPQEIDPDLTQSMARLRRAGVTLLNQSVLLRGVNDNAETLARLSNALFDAGILPYYLHV 271

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            D   G +HF +   E + +V +L +K+SG   P    ++ G   K  +D
Sbjct: 272 LDKVQGAAHFLVDDNEARILVKALLKKVSGYLVPRLAREIGGEASKTPLD 321


>gi|260599504|ref|YP_003212075.1| kamA family protein YjeK [Cronobacter turicensis z3032]
 gi|260218681|emb|CBA34029.1| Uncharacterized kamA family protein yjeK [Cronobacter turicensis
           z3032]
          Length = 342

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 165/307 (53%), Gaps = 5/307 (1%)

Query: 18  NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
           N+   E++   ++    +++ +    A  +   NP DP+ RQ +  +EE    P    DP
Sbjct: 34  NIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTSREEFVAAPGFTTDP 93

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALA 136
           + + N S + G++H+Y +R LL +   C V CR+CFRR       +G   + ++ +AAL 
Sbjct: 94  LEEQN-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG---NKRNWQAALD 149

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
           YI   +++ E+IF+GGDPL+     L+ ++  +  I H++ LR HSR+PIV P RI   L
Sbjct: 150 YIAAHAELDEIIFSGGDPLMAKDHELEWLVANIEAIPHIKRLRIHSRLPIVIPARITDAL 209

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
           ++ L E    V +  H NH  E  +   A +++L  AG+ LL+QSVLLKG+ND+   L  
Sbjct: 210 VRLLGETRLQVLLVNHINHAQEIDDAFRAGMTKLRAAGVTLLNQSVLLKGVNDNAATLTA 269

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L     +  + PYYLH  D   G +HF ++ +E + I+  L  ++SG   P    ++ G 
Sbjct: 270 LSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSQVSGYLVPKLAREIGGE 329

Query: 317 YGKVKID 323
             K  +D
Sbjct: 330 PSKTPLD 336


>gi|242280374|ref|YP_002992503.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           salexigens DSM 2638]
 gi|242123268|gb|ACS80964.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 353

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/283 (37%), Positives = 154/283 (54%), Gaps = 20/283 (7%)

Query: 38  ALTPVIANLINPHNPNDPIARQFIPQKEELN---------ILPEEREDPIGDNNHSPLKG 88
             TP +A+L++  +PN PI  Q IP  +E           +  E R     D        
Sbjct: 40  GTTPHMASLMDKDDPNCPIRMQAIPSLKETKNEFGLDNYLVWKENR-----DTEEKRPDC 94

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           I  +Y DRI   +  +C  YCR CFR+E+V  +   +    D E  + +I+E  +I +V+
Sbjct: 95  IARQYVDRIAFTVTDICANYCRHCFRKELVVDKNLEL--RFDLEEGIDWIREHEEIRDVL 152

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL-KEAGKPV 207
            TGGDPL+LS  R+  +LK+LR I HV+++RF SRVPI  PQRI PEL++ L  +   PV
Sbjct: 153 VTGGDPLLLSDDRIDHLLKSLRSIDHVEMIRFGSRVPIAMPQRITPELLEVLGGDHEVPV 212

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           ++    NHP E +     A+  L  AG+ + +Q VLLKGINDD E   +L +  ++ RI+
Sbjct: 213 WLNTQCNHPKELTPRTRKAVYDLLTAGVNVGNQMVLLKGINDDVETFRHLHQKLLQYRIR 272

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
           PYY+ + + A G  HFR   E    I   L+   +GL QP Y+
Sbjct: 273 PYYVFYCEPAPGIDHFRTRAE---LIRDGLRGHTTGLAQPMYV 312


>gi|119475089|ref|ZP_01615442.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143]
 gi|119451292|gb|EAW32525.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143]
          Length = 343

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 169/313 (53%), Gaps = 2/313 (0%)

Query: 12  QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILP 71
           ++L+N   + K ++ +     + + + +     + +   + +DP+ +Q +P  +EL++ P
Sbjct: 33  EELFNLLELDKSKLPDALRGCDDFPLQVPRAFVDRMVKGDWSDPLLQQILPLGQELDLHP 92

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
               DP+ + + +P+ G++H+Y  R+LL +   C + CR+CFRR     +     S ++ 
Sbjct: 93  GFSNDPLLELSDNPIPGLIHKYHGRVLLIVSGGCAINCRYCFRRHFPYQENNP--SQREW 150

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
           + AL YI++ + I EVI +GGDPL  +   L+ +   +  I HV+ILR HSR+P+V PQR
Sbjct: 151 QQALDYIRQDNSIKEVILSGGDPLAANDNMLRDLTTRIADIPHVEILRVHSRMPVVIPQR 210

Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
           I    +  L        + IH+NHP E     I A+  L   G+ LL+Q+VLL GIND+P
Sbjct: 211 ITSPSMNWLTNTRLTPVMVIHSNHPNEIDHHVIEALQTLKREGVTLLNQTVLLAGINDNP 270

Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
           E L  L +      + PYYLH  D  +G +HF +T    ++++  L+ ++ G   P  + 
Sbjct: 271 EALLALSKRLFAAGVLPYYLHMLDKVSGAAHFEVTERRAKELITILRNQLPGYLIPKLVR 330

Query: 312 DLPGGYGKVKIDT 324
           +  G   K+ I+ 
Sbjct: 331 EQSGELSKMPINN 343


>gi|88798858|ref|ZP_01114440.1| radical SAM domain protein [Reinekea sp. MED297]
 gi|88778338|gb|EAR09531.1| radical SAM domain protein [Reinekea sp. MED297]
          Length = 346

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 155/288 (53%), Gaps = 2/288 (0%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           + + +T  +A+L+   NP DP+  Q IP+ +E    P  + DP+ + ++  + G++H+Y 
Sbjct: 59  FRMRITRHLASLMEKGNPFDPLLLQLIPRLDETTEQPGYQTDPLMEEDYQVIPGLIHKYQ 118

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +R+L+     C ++CR+CFRR    S+    LS    +A   YIQ  S I EVIF+GGDP
Sbjct: 119 NRVLIIAHQACAIHCRYCFRRHFPYSEAR--LSESSLDAIEQYIQSHSDIDEVIFSGGDP 176

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L L+ + L  +++    +  +Q +R H+R P+  P+RI   L+  L      V + +H N
Sbjct: 177 LSLADEALSNLIQRFDRLPQIQTVRLHTRTPVAAPERITETLLNTLNNLSCQVVMVVHIN 236

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           HP E   + +A   RL +  + LL+QSVLL+GIND  +    L +      + PYYLH  
Sbjct: 237 HPNELHPDLLAKFLRLRDINVTLLNQSVLLRGINDCSKTQIRLCKQLFAHGVLPYYLHSL 296

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           D   GTSHF +  +   +I   ++  +SG   P  + ++P  + K  I
Sbjct: 297 DPVQGTSHFDVNQQTAGQIWLEMQAGLSGYLLPRLVREIPQRHSKTWI 344


>gi|311281298|ref|YP_003943529.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae
           SCF1]
 gi|308750493|gb|ADO50245.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae
           SCF1]
          Length = 342

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/273 (35%), Positives = 151/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ +Q I  ++E    P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPNDPLLKQVITSQDEFVAAPGFSTDPL-EEQHSVVPGLLHKYLNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + ALAYI    ++ E+IF+GGDPL+     L  ++  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQVALAYIAAHPELDEIIFSGGDPLMAKDHELDWLISELE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+P+V P RI   L +    +   + +  H NH  E  ++  AA+  L
Sbjct: 184 AIPHIKRLRIHSRLPVVIPARITGALAERFARSSLQILLVNHINHAQEIDDDFRAAMKTL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 244 RQAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           + IV  L   ISG   P    ++ G   K  +D
Sbjct: 304 RTIVRELLTLISGYMVPKLAREIGGEPSKTPLD 336


>gi|169632907|ref|YP_001706643.1| hypothetical protein ABSDF1142 [Acinetobacter baumannii SDF]
 gi|169151699|emb|CAP00492.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 338

 Score =  181 bits (458), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 102/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           +N  +P DP+  Q +P   EL   PE   DP+G+   + L G++H+Y  R LL L   C 
Sbjct: 59  MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V+CR+CFRR      +  +  ++D      YI+    I EVI +GGDPL LS+++L   L
Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 176

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           + L  +K V+ILR HSRVPIV P RI+ ELI  LK +   + + +H+NH  E  +   + 
Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L+   I +L+Q+VLLKG+ND  + L +L     E RI PYYLH  D   G  HF L 
Sbjct: 237 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARIMPYYLHVLDKVKGAQHFDLI 296

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             E   I   +   + G   P  + ++ G   K  +
Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|300920832|ref|ZP_07137231.1| KamA family protein [Escherichia coli MS 115-1]
 gi|300412197|gb|EFJ95507.1| KamA family protein [Escherichia coli MS 115-1]
          Length = 342

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 153/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  I P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|262372891|ref|ZP_06066170.1| lysine 2,3-aminomutase [Acinetobacter junii SH205]
 gi|262312916|gb|EEY94001.1| lysine 2,3-aminomutase [Acinetobacter junii SH205]
          Length = 338

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/270 (36%), Positives = 147/270 (54%), Gaps = 2/270 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P DP+  Q +P   EL   PE   DP+G+   + + G++H+Y  R LL L   C ++CR
Sbjct: 63  DPFDPLLLQVLPHHLELEDHPEFVTDPLGEEAANQMAGVLHKYQSRFLLTLTGACAIHCR 122

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR      +  +  + D      YI++  QI EVI +GGDPL LS+++L   L+ L 
Sbjct: 123 YCFRRHF--PYQENLPKNDDWINIKQYIEQNPQINEVILSGGDPLTLSNRKLSLWLERLA 180

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            +  ++ILR HSRVP+V P RI+ ELI  LK +   + + IH+NH  E  +   + + +L
Sbjct: 181 SLPQIKILRIHSRVPVVIPNRIDEELISILKNSRLRIVVVIHSNHAAELDDFTCSKLLQL 240

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
           +   I +L+Q+VLLKG+ND  EIL NL     + R+ PYYLH  D   G  HF L   E 
Sbjct: 241 SEHHITVLNQAVLLKGVNDSAEILNNLSLRLFDARVMPYYLHVLDKVKGAQHFDLRSSEI 300

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
             I   +   + G   P  + ++ G   K 
Sbjct: 301 DHIYTDVLASLPGYLVPKLVREIAGEKNKT 330


>gi|90416321|ref|ZP_01224253.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium
           HTCC2207]
 gi|90332046|gb|EAS47260.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium
           HTCC2207]
          Length = 341

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 163/317 (51%), Gaps = 2/317 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + +TS   L +   +  EQ+   ++ +  +++ +       + P NP DP+  Q +P   
Sbjct: 26  QAVTSIDQLLSCLDLTIEQLSTSQQAAAEFALKVPRPFIQRMQPGNPKDPLLLQVLPVAA 85

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E+   P+  +DP+ ++ H+P+ GIVH+Y +R+LL +   C + CR+CFRR     +    
Sbjct: 86  EMVPSPDYNQDPLEESKHNPIAGIVHKYANRLLLVISPACAINCRYCFRRHFPYDENRQ- 144

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            S +  + AL YI+    I EVI++GGDPL  +   L  +   +  I H++ LR H+R+P
Sbjct: 145 -SKQQWQTALDYIRNDKSINEVIYSGGDPLAANDTFLSWLTSEIADIAHIKRLRIHTRLP 203

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P RI+   +           + +H NH  E  ++   AI +L  AG+ +L+QSVLL+
Sbjct: 204 VVIPARIDQGFLNWATATRLKPIVVLHINHANEIDDDVAEAIRKLTGAGMQVLNQSVLLR 263

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GIND    LA+L     +  + PYYLH  D  AG  HF L     +++   L+  + G  
Sbjct: 264 GINDSAVTLADLSERLFDCGVTPYYLHLCDPVAGAQHFDLDETTAKQLYGQLQTLLPGFL 323

Query: 306 QPFYILDLPGGYGKVKI 322
            P  + ++P    K  I
Sbjct: 324 VPKLVREIPDRESKTLI 340


>gi|194434729|ref|ZP_03066981.1| KamA family protein [Shigella dysenteriae 1012]
 gi|194417010|gb|EDX33127.1| KamA family protein [Shigella dysenteriae 1012]
 gi|320180662|gb|EFW55589.1| Lysine 2,3-aminomutase [Shigella boydii ATCC 9905]
 gi|332083146|gb|EGI88377.1| kamA family protein [Shigella boydii 5216-82]
          Length = 342

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  I P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITEALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 244 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|239501163|ref|ZP_04660473.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB900]
          Length = 338

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           +N  +P DP+  Q +P   EL   PE   DP+G+   + L G++H+Y  R LL L   C 
Sbjct: 59  MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V+CR+CFRR      +  +  ++D      YI+    I EVI +GGDPL LS+++L   L
Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 176

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           + L  +K V+ILR HSRVPIV P RI+ ELI  LK +   + + +H+NH  E  +   + 
Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L+   I +L+Q+VLLKG+ND  + L +L     E R+ PYYLH  D   G  HF L 
Sbjct: 237 LLQLSGHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 296

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             E   I   +   + G   P  + ++ G   K  +
Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|82779418|ref|YP_405767.1| hypothetical protein SDY_4389 [Shigella dysenteriae Sd197]
 gi|81243566|gb|ABB64276.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
          Length = 342

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 153/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  I P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|332083734|gb|EGI88952.1| kamA family protein [Shigella dysenteriae 155-74]
          Length = 301

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  I P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 26  NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 84

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 85  YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 142

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++L
Sbjct: 143 AIPHIKRLRIHSRLPIVIPARITEALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 202

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 203 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 262

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 263 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 295


>gi|169795200|ref|YP_001712993.1| hypothetical protein ABAYE1057 [Acinetobacter baumannii AYE]
 gi|184158947|ref|YP_001847286.1| lysine 2,3-aminomutase [Acinetobacter baumannii ACICU]
 gi|213158137|ref|YP_002320188.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057]
 gi|215482748|ref|YP_002324946.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii
           AB307-0294]
 gi|301346998|ref|ZP_07227739.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB056]
 gi|301511118|ref|ZP_07236355.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB058]
 gi|301596429|ref|ZP_07241437.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB059]
 gi|332857081|ref|ZP_08436387.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150]
 gi|332870019|ref|ZP_08438995.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113]
 gi|332874730|ref|ZP_08442600.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059]
 gi|169148127|emb|CAM85990.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
 gi|183210541|gb|ACC57939.1| Lysine 2,3-aminomutase [Acinetobacter baumannii ACICU]
 gi|193077935|gb|ABO12838.2| putative aminomutase [Acinetobacter baumannii ATCC 17978]
 gi|213057297|gb|ACJ42199.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057]
 gi|213987501|gb|ACJ57800.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii
           AB307-0294]
 gi|322508931|gb|ADX04385.1| lysine 2,3-aminomutase [Acinetobacter baumannii 1656-2]
 gi|323518917|gb|ADX93298.1| lysine 2,3-aminomutase [Acinetobacter baumannii TCDC-AB0715]
 gi|332726896|gb|EGJ58410.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150]
 gi|332732519|gb|EGJ63770.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113]
 gi|332736991|gb|EGJ67948.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059]
          Length = 338

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           +N  +P DP+  Q +P   EL   PE   DP+G+   + L G++H+Y  R LL L   C 
Sbjct: 59  MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V+CR+CFRR      +  +  ++D      YI+    I EVI +GGDPL LS+++L   L
Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 176

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           + L  +K V+ILR HSRVPIV P RI+ ELI  LK +   + + +H+NH  E  +   + 
Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L+   I +L+Q+VLLKG+ND  + L +L     E R+ PYYLH  D   G  HF L 
Sbjct: 237 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 296

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             E   I   +   + G   P  + ++ G   K  +
Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|309787707|ref|ZP_07682318.1| kamA family protein [Shigella dysenteriae 1617]
 gi|308924457|gb|EFP69953.1| kamA family protein [Shigella dysenteriae 1617]
          Length = 320

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  I P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 45  NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 103

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 104 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 161

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++L
Sbjct: 162 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 221

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 222 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 281

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 282 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 314


>gi|126642456|ref|YP_001085440.1| putative aminomutase [Acinetobacter baumannii ATCC 17978]
          Length = 280

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           +N  +P DP+  Q +P   EL   PE   DP+G+   + L G++H+Y  R LL L   C 
Sbjct: 1   MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 60

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V+CR+CFRR      +  +  ++D      YI+    I EVI +GGDPL LS+++L   L
Sbjct: 61  VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 118

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           + L  +K V+ILR HSRVPIV P RI+ ELI  LK +   + + +H+NH  E  +   + 
Sbjct: 119 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 178

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L+   I +L+Q+VLLKG+ND  + L +L     E R+ PYYLH  D   G  HF L 
Sbjct: 179 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 238

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             E   I   +   + G   P  + ++ G   K  +
Sbjct: 239 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 274


>gi|89256661|ref|YP_514023.1| hypothetical protein FTL_1362 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315075|ref|YP_763798.1| hypothetical protein FTH_1327 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156502809|ref|YP_001428874.1| hypothetical protein FTA_1443 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167010527|ref|ZP_02275458.1| radical SAM domain protein [Francisella tularensis subsp.
           holarctica FSC200]
 gi|290953399|ref|ZP_06558020.1| hypothetical protein FtulhU_03333 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313360|ref|ZP_06803969.1| hypothetical protein FtulhU_03323 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89144492|emb|CAJ79801.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129974|gb|ABI83161.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156253412|gb|ABU61918.1| lysine 2,3-aminomutase, YodO family protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
          Length = 328

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 158/296 (53%), Gaps = 4/296 (1%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           I+  + + +    A+ +   N NDP+ +Q +P  +E  I      DP+ + N++ + G++
Sbjct: 37  IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 96

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R+LL    +C V+CR+CFR+E     K  +   KD   A  YI     I EVI +
Sbjct: 97  HKYHGRVLLIAQTICAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+V P+R+  +L++ L E      + 
Sbjct: 155 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           IH NHP E        +  +   GII+L+QS LLK INDD  +L  L    +  ++ PYY
Sbjct: 215 IHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +H  D  +GT H+   ++  + I+  L E  SG   P    ++PG   K  +  H+
Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328


>gi|301023473|ref|ZP_07187251.1| KamA family protein [Escherichia coli MS 69-1]
 gi|300396989|gb|EFJ80527.1| KamA family protein [Escherichia coli MS 69-1]
          Length = 342

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 152/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ I  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
              G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|28899620|ref|NP_799225.1| hypothetical protein VP2846 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260364033|ref|ZP_05776761.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030]
 gi|260876639|ref|ZP_05888994.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034]
 gi|260898079|ref|ZP_05906575.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466]
 gi|260902332|ref|ZP_05910727.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037]
 gi|28807872|dbj|BAC61109.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085822|gb|EFO35517.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466]
 gi|308093973|gb|EFO43668.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034]
 gi|308110956|gb|EFO48496.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037]
 gi|308114570|gb|EFO52110.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030]
          Length = 340

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 150/275 (54%), Gaps = 3/275 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  +E  +      DP+ D   + + G++H+Y +R+L+ +   C V CR
Sbjct: 67  NPKDPLLRQVLPLSDEFEVHAGYSNDPL-DEQDNAIPGLLHKYKNRVLMIVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     +  +    +     + Y+ EK ++ EVIF+GGDPL+     +  +L+ + 
Sbjct: 126 YCFRRHFPYQENKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+P+V P RI  EL Q LK +   + +  H NH  E ++E   A+ +L
Sbjct: 184 KIPHIKRLRIHSRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             A + LL+Q VLLKG+ND  + L+ L     +  I PYYLH  D   G +HF +  E  
Sbjct: 244 KEANVTLLNQGVLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           ++++A L E +SG   P    ++ G   K  +D H
Sbjct: 304 RQLMAGLLENVSGYLIPTLTREIGGRKSKTPLDLH 338


>gi|300940634|ref|ZP_07155196.1| KamA family protein [Escherichia coli MS 21-1]
 gi|306815636|ref|ZP_07449785.1| putative lysine aminomutase [Escherichia coli NC101]
 gi|331650273|ref|ZP_08351345.1| putative radical SAM domain protein [Escherichia coli M605]
 gi|331671299|ref|ZP_08372097.1| putative radical SAM domain protein [Escherichia coli TA280]
 gi|281181244|dbj|BAI57574.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|300454586|gb|EFK18079.1| KamA family protein [Escherichia coli MS 21-1]
 gi|305851298|gb|EFM51753.1| putative lysine aminomutase [Escherichia coli NC101]
 gi|330908490|gb|EGH37009.1| lysine 2,3-aminomutase [Escherichia coli AA86]
 gi|331040667|gb|EGI12825.1| putative radical SAM domain protein [Escherichia coli M605]
 gi|331071144|gb|EGI42501.1| putative radical SAM domain protein [Escherichia coli TA280]
          Length = 342

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ I  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|254525082|ref|ZP_05137137.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp.
           SKA14]
 gi|219722673|gb|EED41198.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp.
           SKA14]
          Length = 313

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/266 (36%), Positives = 144/266 (54%), Gaps = 4/266 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +  DP+ RQ +P  EE+   P    D +GD       G++ +Y  R LL     C + CR
Sbjct: 44  DAADPLLRQVLPIDEEMRPAPGFSFDAVGDGAARKATGVIQKYRGRALLVATGSCAINCR 103

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR    G++     +    + A+A I     I EVI +GGDPL L+  +L ++   L
Sbjct: 104 YCFRRHFDYGAENA---AKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLVELTDAL 160

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
           R I H++ LR HSR+PIV P+R++ EL+  L     P+ I +HANH  EF     AA++R
Sbjct: 161 RAIPHIRRLRIHSRLPIVLPERVDEELLAWLGSLPWPLAIVVHANHANEFDASVDAAMAR 220

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G  LL+Q+VLL+G+ND  + L +L      + + PYYLH  D   G +HF +    
Sbjct: 221 LRGTGAQLLNQAVLLRGVNDSVQALQDLSERSFAVGVLPYYLHQLDRVEGVAHFEVDDAR 280

Query: 290 GQKIVASLKEKISGLCQPFYILDLPG 315
            + ++A L  ++SG   P  + +LPG
Sbjct: 281 AKALIAGLTARLSGYLIPKLVRELPG 306


>gi|116753457|ref|YP_842575.1| lysine 2,3-aminomutase YodO family protein [Methanosaeta
           thermophila PT]
 gi|116664908|gb|ABK13935.1| L-lysine 2,3-aminomutase [Methanosaeta thermophila PT]
          Length = 392

 Score =  180 bits (456), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 172/300 (57%), Gaps = 11/300 (3%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
           D+ +   +K+++  ++  ++ +++   +    +LI+ ++P DP+ +  IP   E+     
Sbjct: 6   DIMDVMQLKEDERKDLSSVTENFAFRASSYYLSLIDWNDPQDPLRKIVIPDANEMYNWGT 65

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDT 131
           +  DP  + +++ L G+ H+Y    L+ + + C   CRFCFR+ + + S   T +   D 
Sbjct: 66  K--DPSRERSYTVLPGLQHKYRQTALMLVSNACGSLCRFCFRKRIFIDSHHETAI---DL 120

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
             AL YI+E  +I  V+ +GGDPL+LS +RL+++++ LR I HVQI+R  +++P+ +P R
Sbjct: 121 PRALDYIREHREITNVLLSGGDPLMLSTERLEEIVRRLRDIDHVQIIRIGTKLPVYNPFR 180

Query: 192 I--NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           I  +P L++ +K      + +Y  I  NHP E S E + A+S+L  AG I +SQ+ LL+G
Sbjct: 181 ITEDPSLLEIVKRYSHENRRIYFVIQFNHPKEISSETLKAVSQLQEAGAITVSQTPLLRG 240

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+PE LA L +    + + PYY+     + G  HF++ +E    IV   K   SGL +
Sbjct: 241 VNDNPETLAQLFKKLSFIGVSPYYVFQCRPSIGNYHFQVPVETSYAIVEKAKSMCSGLAK 300


>gi|218707761|ref|YP_002415280.1| putative lysine aminomutase [Escherichia coli UMN026]
 gi|293402777|ref|ZP_06646874.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412]
 gi|293407873|ref|ZP_06651713.1| kamA family protein yjeK [Escherichia coli B354]
 gi|298378306|ref|ZP_06988190.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302]
 gi|300899683|ref|ZP_07117911.1| KamA family protein [Escherichia coli MS 198-1]
 gi|331665813|ref|ZP_08366707.1| putative radical SAM domain protein [Escherichia coli TA143]
 gi|218434858|emb|CAR15796.1| putative lysine aminomutase [Escherichia coli UMN026]
 gi|284924332|emb|CBG37448.1| radical SAM superfamily protein [Escherichia coli 042]
 gi|291429692|gb|EFF02706.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412]
 gi|291472124|gb|EFF14606.1| kamA family protein yjeK [Escherichia coli B354]
 gi|298280640|gb|EFI22141.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302]
 gi|300356752|gb|EFJ72622.1| KamA family protein [Escherichia coli MS 198-1]
 gi|331056864|gb|EGI28858.1| putative radical SAM domain protein [Escherichia coli TA143]
          Length = 342

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ I  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVEHFSHSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|299769252|ref|YP_003731278.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1]
 gi|298699340|gb|ADI89905.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1]
          Length = 338

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 101/291 (34%), Positives = 152/291 (52%), Gaps = 2/291 (0%)

Query: 32  SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
           S  + + +       +N  NP DP+  Q +P   EL   PE   DP+G+   + L G++H
Sbjct: 44  SEQFKLRVPRAFVGKMNAKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLH 103

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           +Y  R LL L   C V+CR+CFRR      +  +  + D      YI+    I E+I +G
Sbjct: 104 KYKSRFLLTLTGACAVHCRYCFRRHF--PYQENLPKNDDWLNIKNYIEANPHINEIILSG 161

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           GDPL LS+++L   L+ L  +K ++ILR HSRVPIV P RI+ ELI  LK +   + + +
Sbjct: 162 GDPLTLSNRKLALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIVLVV 221

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
           H+NH  E  +   + + +L+   I +L+Q+VLLKG+ND  + L +L     E R+ PYYL
Sbjct: 222 HSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYL 281

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           H  D   G  HF L   E   I   +   + G   P  + ++ G   K  +
Sbjct: 282 HVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332


>gi|261823176|ref|YP_003261282.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae
           WPP163]
 gi|261607189|gb|ACX89675.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae
           WPP163]
          Length = 348

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 156/290 (53%), Gaps = 5/290 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A  +   +P+DP+  Q +  +EE    P    DP+ D  HS + G++H+Y 
Sbjct: 51  FALRVPRAFAARMQKGDPDDPLLLQVLTAREEFIATPGFTHDPL-DEQHSVVPGLLHKYH 109

Query: 95  DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           +R LL +   C V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGD
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELNEIIFSGGD 166

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+     L  ++  L +I H++ LR HSR+P+V P RI   L   L  +   V +  H 
Sbjct: 167 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 226

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E   +   +++RL  AG+ LL+QSVLL+G+ND  E LA L     +  I PYYLH 
Sbjct: 227 NHPQEIDPDLTQSMARLRRAGVTLLNQSVLLRGVNDSAETLAQLSNALFDAGILPYYLHV 286

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            D   G +HF +   E + +V +L +K+SG   P    ++ G   K  +D
Sbjct: 287 LDKVQGAAHFLVDDNEARVLVKALMKKVSGYLVPRLAREIGGEASKTPLD 336


>gi|332160002|ref|YP_004296579.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664232|gb|ADZ40876.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 281

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P NP+DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 1   MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 59

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           + CR+CFRR       +G   +  +   AL Y+ +  ++ E+IF+GGDPL+     L  +
Sbjct: 60  INCRYCFRRHFPYQDNQG---NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWL 116

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  +  I H++ LR H+R+P+V P RI  EL Q L ++   V +  H NH  E       
Sbjct: 117 LDEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRD 176

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           ++++L  AG+ LL+QSVLL+G+NDD E+LA L  T  +  I PYY+H  D   G +HF +
Sbjct: 177 SMAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMV 236

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 237 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 274


>gi|149911234|ref|ZP_01899857.1| hypothetical 38.7 kDa protein [Moritella sp. PE36]
 gi|149805688|gb|EDM65687.1| hypothetical 38.7 kDa protein [Moritella sp. PE36]
          Length = 310

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 151/276 (54%), Gaps = 7/276 (2%)

Query: 45  NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
           N+ +  +PNDPI  Q IP+ EEL+ +     DP+ D+ H  + G++H+Y DR+LL     
Sbjct: 32  NIADFDDPNDPILLQIIPKLEELDTVKGFNLDPVNDSQHEKITGLIHKYHDRVLLLFSKH 91

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           CP++CR+CFR+    S      + +  EA L+YI+    I EVI +GGDPL ++   L  
Sbjct: 92  CPIHCRYCFRKGYNYSDN----NKQQIEAWLSYIESNHDIEEVILSGGDPLFVNSATLLD 147

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP---VYIAIHANHPYEFSE 221
            +  +  IKH+   R HSR+P+V P  ++  L   ++ A K    + + IH+NH  E ++
Sbjct: 148 FVTRVSAIKHITRFRIHSRMPVVSPSLLDKNLANRIRRAAKKDIDMILVIHSNHEKELTD 207

Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
           E + ++S     G I+L+ SVLLKGIND+   L +L R  + + + PYYL+  D   G++
Sbjct: 208 EVVKSVSSFQAEGFIILNHSVLLKGINDNALTLKSLSRKLIRMGVIPYYLNLLDKIEGSA 267

Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
           HF +       I   L++  SG   P  + D    Y
Sbjct: 268 HFFVEKNISLSIYQELQKISSGYLVPKLVQDNGKDY 303


>gi|16131971|ref|NP_418570.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia
           coli str. K-12 substr. MG1655]
 gi|89110867|ref|AP_004647.1| predicted lysine aminomutase [Escherichia coli str. K-12 substr.
           W3110]
 gi|238903254|ref|YP_002929050.1| putative lysine aminomutase [Escherichia coli BW2952]
 gi|256025082|ref|ZP_05438947.1| putative lysine aminomutase [Escherichia sp. 4_1_40B]
 gi|301027965|ref|ZP_07191250.1| KamA family protein [Escherichia coli MS 196-1]
 gi|732002|sp|P39280|YJEK_ECOLI RecName: Full=Uncharacterized KamA family protein YjeK
 gi|536990|gb|AAA97045.1| ORF_f342 [Escherichia coli str. K-12 substr. MG1655]
 gi|1790589|gb|AAC77106.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia
           coli str. K-12 substr. MG1655]
 gi|85676898|dbj|BAE78148.1| predicted lysine aminomutase [Escherichia coli str. K12 substr.
           W3110]
 gi|238862637|gb|ACR64635.1| predicted lysine aminomutase [Escherichia coli BW2952]
 gi|260451026|gb|ACX41448.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli DH1]
 gi|299878944|gb|EFI87155.1| KamA family protein [Escherichia coli MS 196-1]
 gi|315138701|dbj|BAJ45860.1| putative lysine aminomutase [Escherichia coli DH1]
 gi|323380464|gb|ADX52732.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli KO11]
 gi|323940066|gb|EGB36260.1| KamA family protein [Escherichia coli E482]
          Length = 342

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  I P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++C   +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVECFARSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+ +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|218692484|ref|YP_002400696.1| putative lysine aminomutase [Escherichia coli ED1a]
 gi|218430048|emb|CAR11037.2| putative lysine aminomutase [Escherichia coli ED1a]
          Length = 342

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 96/273 (35%), Positives = 152/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ I  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
              G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|238750049|ref|ZP_04611552.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC
           43380]
 gi|238711593|gb|EEQ03808.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC
           43380]
          Length = 335

 Score =  179 bits (455), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 154/278 (55%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P NP+DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 55  MQPGNPSDPLLLQVLTAREEFITAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGDPL+     L  +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDNELSWL 170

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  L  I H++ LR H+R+P+V P RI   L Q L E+   V +  H NH  E  ++   
Sbjct: 171 LDELESIPHIKRLRIHTRLPVVIPARITAALCQRLSESRLQVLMVTHINHANEIDQDLRD 230

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           ++++L  AG+ LL+QSVLL+G+NDD E+LA L     +  I PYY+H  D   G +HF +
Sbjct: 231 SMAQLKRAGVTLLNQSVLLRGVNDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 328


>gi|225569398|ref|ZP_03778423.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM
           15053]
 gi|225161606|gb|EEG74225.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM
           15053]
          Length = 393

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 177/312 (56%), Gaps = 17/312 (5%)

Query: 29  KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
           + I   Y +++     +LIN  +  D I +  IP   E++I      D  G+++++ L+G
Sbjct: 61  RNILEKYPMSVPRYYLSLINTDDEGDCIRKMSIPSFSEMDITGTF--DTSGESSNTKLRG 118

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           + H+YP  +LL   + C +YCR+CFR+ MVGS    ++  +D + A++YI E ++I  V+
Sbjct: 119 LQHKYPQTVLLLSTNRCAMYCRYCFRKRMVGSHTEEIV--EDIDKAVSYIAEHTEISNVL 176

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKE--AG 204
            +GGD  +L +  ++  L  L  I H+  +RF ++VP+V PQRI  + EL   LK+    
Sbjct: 177 ISGGDSFLLDNAAIEHYLSALCSIGHIDYIRFGTKVPVVFPQRITDDRELQDILKKYCTK 236

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
           K +Y+    NHP E +E A+ A++ L + G+I+ +Q+VLLKGINDDP +LA LM+ F ++
Sbjct: 237 KQLYVMTQFNHPSELTEHAVNAVNCLKSLGLIVKNQTVLLKGINDDPAVLAGLMKQFTKI 296

Query: 265 RIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGGYGKVKI 322
            I PYY+       G  + F++ +  G  IV   K   +G  + F Y L  P   GKV+I
Sbjct: 297 GILPYYVFQCRPVTGVKNQFQVPLRTGYDIVEQAKRLQNGNGKCFRYALSNPD--GKVEI 354

Query: 323 -----DTHNIKK 329
                D+H I K
Sbjct: 355 IGKMDDSHMIFK 366


>gi|56707865|ref|YP_169761.1| hypothetical protein FTT_0750 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670336|ref|YP_666893.1| hypothetical protein FTF0750 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301708|ref|YP_001121676.1| hypothetical protein FTW_0659 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|224456943|ref|ZP_03665416.1| hypothetical protein FtultM_04156 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370360|ref|ZP_04986365.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874680|ref|ZP_05247390.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604357|emb|CAG45383.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320669|emb|CAL08766.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049485|gb|ABO46556.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella
           tularensis subsp. tularensis WY96-3418]
 gi|151568603|gb|EDN34257.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840679|gb|EET19115.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159045|gb|ADA78436.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella
           tularensis subsp. tularensis NE061598]
          Length = 328

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           I+  + + +    A+ +   N NDP+ +Q +P  +E  I      DP+ + N++ + G++
Sbjct: 37  IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 96

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R+LL     C V+CR+CFR+E     K  +   KD   A  YI     I EVI +
Sbjct: 97  HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+V P+RI  +L++ L E      + 
Sbjct: 155 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERITTKLLKILSEHRLDTVLV 214

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           IH NHP E        +  +   GII+L+QS LLK INDD  +L  L    +  ++ PYY
Sbjct: 215 IHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +H  D  +GT H+   ++  + I+  L E  SG   P    ++PG   K  +  H+
Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328


>gi|260556680|ref|ZP_05828898.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606]
 gi|260409939|gb|EEX03239.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606]
          Length = 338

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           +N  +P DP+  Q +P   EL   PE   DP+G+   + L G++H+Y  R LL L   C 
Sbjct: 59  MNVKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V+CR+CFRR      +  +  ++D      YI+    I EVI +GGDPL LS+++L   L
Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 176

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           + L  +K V+ILR HSRVPIV P RI+ ELI  LK +   + + +H+NH  E  +   + 
Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L+   I +L+Q+VLLKG+ND  + L +L     E R+ PYYLH  D   G  HF L 
Sbjct: 237 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 296

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             E   I   +   + G   P  + ++ G   K  +
Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|57340042|gb|AAW50008.1| hypothetical protein FTT0750 [synthetic construct]
          Length = 363

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 97/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           I+  + + +    A+ +   N NDP+ +Q +P  +E  I      DP+ + N++ + G++
Sbjct: 63  IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 122

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R+LL     C V+CR+CFR+E     K  +   KD   A  YI     I EVI +
Sbjct: 123 HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 180

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+V P+RI  +L++ L E      + 
Sbjct: 181 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERITTKLLKILSEHRLDTVLV 240

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           IH NHP E        +  +   GII+L+QS LLK INDD  +L  L    +  ++ PYY
Sbjct: 241 IHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 300

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +H  D  +GT H+   ++  + I+  L E  SG   P    ++PG   K  +  H+
Sbjct: 301 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 354


>gi|328472254|gb|EGF43124.1| lysine 2,3-aminomutase [Vibrio parahaemolyticus 10329]
          Length = 340

 Score =  179 bits (455), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 149/275 (54%), Gaps = 3/275 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  +E  +      DP+ D   + + G++H+Y +R+L+ +   C V CR
Sbjct: 67  NPKDPLLRQVLPLSDEFEVHAGYSNDPL-DEQDNAIPGLLHKYKNRVLMIVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     +  +    +     + Y+ EK ++ EVIF+GGDPL+     +  +L+ + 
Sbjct: 126 YCFRRHFPYQENKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+P+V P RI  EL Q LK +   + +  H NH  E ++E   A+ +L
Sbjct: 184 QIPHIKRLRIHSRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             A + LL+Q VLLKG+ND  + L  L     +  I PYYLH  D   G +HF +  E  
Sbjct: 244 KEANVTLLNQGVLLKGVNDSVDALIQLSEALFDAGIMPYYLHVLDKVQGAAHFMVDDERA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           ++++A L E +SG   P    ++ G   K  +D H
Sbjct: 304 RQLMAGLLENVSGYLIPTLTREIGGRKSKTPLDLH 338


>gi|308048213|ref|YP_003911779.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
 gi|307630403|gb|ADN74705.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
          Length = 340

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 157/294 (53%), Gaps = 3/294 (1%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           E    + + +    A  + P +  DP+ RQ +P  +E  +      DPIG+ +  P+ G+
Sbjct: 46  EARRLFPMLVPKAFAAAMRPGDAQDPLLRQVLPVGDEFLVADGFGPDPIGEQD-GPMPGL 104

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           +H+Y  R+LL L   C V CR+CFRR    +     + + +   A  YI   ++I E++ 
Sbjct: 105 LHKYQSRVLLMLRTGCAVNCRYCFRRHFPYADHK--VGAAELAQAHEYIASDTRINELLL 162

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL+     L +++     + H++ LR H+R+P+V P RI  +L+  L +A   V +
Sbjct: 163 SGGDPLMARDDHLAELVARFSDLPHLKRLRIHTRLPVVLPSRITDQLVSLLADAPWRVVM 222

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
            +H NHP E   E +A ++RL  AG+ LL+Q+VLLKG+ND  + L  L     +  + PY
Sbjct: 223 VLHINHPNELQPELVAGLARLKAAGVTLLNQAVLLKGVNDHADTLVALAEGLFDAGVLPY 282

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           YLH  D  AG +HF +  +  + ++A   +++ G   P  + ++ G   K  ID
Sbjct: 283 YLHLLDRVAGAAHFEVDEDRARALMAEQLQRLPGFLVPRLVREIAGEASKTPID 336


>gi|307132783|ref|YP_003884799.1| lysine 2,3-aminomutase [Dickeya dadantii 3937]
 gi|306530312|gb|ADN00243.1| lysine 2,3-aminomutase [Dickeya dadantii 3937]
          Length = 347

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 161/301 (53%), Gaps = 5/301 (1%)

Query: 24  QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
           Q+   ++    + + +    A  + P +  DP+  Q +  ++E  + P    DP+ D  H
Sbjct: 40  QLSAGRDARKLFPLRVPRAFAARMRPGDARDPLLLQVLTAQDEFIVTPGFSHDPL-DEQH 98

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKS 142
           S + G++H+Y +R LL +   C V CR+CFRR       +G   +  +   AL YI+++ 
Sbjct: 99  SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQQP 155

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           Q+ E+IF+GGDPL+     L  +L  L  I H++ LR H+R+P+V P RI  EL Q L +
Sbjct: 156 QLDEIIFSGGDPLMAKDHELDWLLNELEQIPHLKRLRIHTRLPVVIPARITAELCQRLAQ 215

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           +   V +  H NH  E   E   +++RL  AG+ LL+QSVLL+G+ND+ + LA L     
Sbjct: 216 SSLRVVLVTHINHANEIDAEFTDSMARLRRAGVTLLNQSVLLRGVNDNADTLAALSNALF 275

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           +  I PYYLH  D   G +HF +  +E + ++  L  ++SG   P    ++ G   K  +
Sbjct: 276 DAGILPYYLHVLDKVQGAAHFLVPDDEARALIRELMTQVSGYLVPSLTREIGGEASKTLL 335

Query: 323 D 323
           D
Sbjct: 336 D 336


>gi|283786829|ref|YP_003366694.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
 gi|282950283|emb|CBG89930.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
          Length = 342

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E    P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQQEFIAAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ +AAL YI    ++ E+IF+GGDPL+     L+ +L  L 
Sbjct: 126 YCFRRHFPYTENQG--NKRNWQAALDYINAHPELDEIIFSGGDPLMAKDHELEWLLTRLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I HV+ LR HSR+P+V P RI  EL      +   + +  H NH  E   +   A+++L
Sbjct: 184 DIGHVKRLRIHSRLPVVIPARITGELAARFARSSLQILLVNHINHANEIDGDFREAMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+QSVLL+G+ND+   LA+L     +  + PYYLH  D   G +HF +T +E 
Sbjct: 244 RAAGVTLLNQSVLLRGVNDNARTLADLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   ISG   P    ++ G   K  ID
Sbjct: 304 RQIMRELLTLISGYMVPKLAREIGGEPSKTPID 336


>gi|156932380|ref|YP_001436296.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894]
 gi|156530634|gb|ABU75460.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894]
          Length = 342

 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 164/307 (53%), Gaps = 5/307 (1%)

Query: 18  NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
           N+   E++   ++    +++ +    A  +   NP DP+ RQ +  +EE    P    DP
Sbjct: 34  NIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTAREEFVAAPGFTTDP 93

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALA 136
           + + N S + G++H+Y +R LL +   C V CR+CFRR       +G   + ++ +AAL 
Sbjct: 94  LEEQN-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG---NKRNWQAALD 149

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
           YI    ++ E+IF+GGDPL+     L+ ++  L  I H++ LR HSR+PIV P RI   L
Sbjct: 150 YIAAHPELDEIIFSGGDPLMAKDHELEWLVAHLEAIPHIRRLRIHSRLPIVIPARITDAL 209

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
           ++ L E    V +  H NH  E  +     +++L  AG+ LL+QSVLLKG+ND+   LA 
Sbjct: 210 VRLLGETRLQVLLVNHINHAQEIDDAFREGMAKLRAAGVTLLNQSVLLKGVNDNAATLAA 269

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L     +  + PYYLH  D   G +HF ++ +E + I+  L  ++SG   P    ++ G 
Sbjct: 270 LSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSRVSGYLVPKLAREIGGE 329

Query: 317 YGKVKID 323
             K  +D
Sbjct: 330 PSKTPLD 336


>gi|285018690|ref|YP_003376401.1| lysine aminomutase [Xanthomonas albilineans GPE PC73]
 gi|283473908|emb|CBA16409.1| probable lysine aminomutase protein [Xanthomonas albilineans]
          Length = 315

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/269 (35%), Positives = 147/269 (54%), Gaps = 2/269 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P+DP+ RQ +P   EL+ +P    D +GD       G++H+Y  R LL     C V+CR
Sbjct: 44  DPHDPLLRQVLPLDAELHRVPGFALDAVGDGAAKKADGVIHKYRGRALLVATGSCAVHCR 103

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    +++    +      A+A I     I EVI +GGDPL L+  +L ++ + L 
Sbjct: 104 YCFRRHFPYAEESA--ARDGWRDAVAAIAADPSIEEVILSGGDPLSLATPKLVELTEALT 161

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            +  ++ LR HSR+P+V P+RI+  L+  L+    P+ + IHANH  EF     AA++RL
Sbjct: 162 ALPQIKRLRLHSRLPVVLPERIDAPLLAWLRALPWPLAVVIHANHANEFDAAVDAALARL 221

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            +AG  LL+Q+VLL+G+ND  E LA L        + PYYLH  D   G +HF +     
Sbjct: 222 RDAGAQLLNQAVLLRGVNDTVEALAKLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDATA 281

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319
             +  +L  ++SG   P  + ++PG   K
Sbjct: 282 LDLHRALASRLSGYLVPKLVREIPGDSSK 310


>gi|238787518|ref|ZP_04631316.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii
           ATCC 33641]
 gi|238724305|gb|EEQ15947.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii
           ATCC 33641]
          Length = 335

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 155/278 (55%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P NP+DP+  Q +  +EE    P   +DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 55  MQPGNPSDPLLLQVLTAREEFIAAPGFTDDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  + + AL YI++  ++ E+IF+GGDPL+     L  +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWQQALDYIRQHPELDEIIFSGGDPLMAKDSELSWL 170

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           +  L  I H++ LR HSR+P+V P RI P L Q L ++   V +  H NH  E       
Sbjct: 171 VGELESITHIKRLRIHSRLPVVIPARITPALCQLLGDSRLQVLMVTHINHANEIDSSFRD 230

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           ++++L  AG+ LL+QSVLL+G+N+D ++LA L     +  I PYY+H  D   G +HF +
Sbjct: 231 SMAQLKRAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 291 NDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 328


>gi|331655977|ref|ZP_08356965.1| putative radical SAM domain protein [Escherichia coli M718]
 gi|331046331|gb|EGI18421.1| putative radical SAM domain protein [Escherichia coli M718]
          Length = 342

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 244 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|27904534|ref|NP_777660.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|46397205|sp|Q89B32|Y022_BUCBP RecName: Full=Uncharacterized KamA family protein bbp_022
 gi|27903931|gb|AAO26765.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 340

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 158/289 (54%), Gaps = 2/289 (0%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +S+ +     + +  ++P DP+  Q +P  +EL       +DP+ +  +  + G++ +Y 
Sbjct: 50  FSLRVPKTFVSRMKKNDPFDPLLLQILPHTKELKNNHNFVQDPLEETKNVIIPGLIRKYN 109

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +RILL L   C + CR+CFRR    SQ     + ++   A+ YI+ ++ + EVI +GGDP
Sbjct: 110 NRILLLLKTNCAINCRYCFRRYFPYSQHPG--NKENLNLAIQYIKNQTDLNEVILSGGDP 167

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L+     +Q ++ TL  I H++ LR H+R+PIV P RI   L + L      + I  H N
Sbjct: 168 LMAKDHEIQWIVNTLSNIYHIKRLRIHTRLPIVIPSRITNNLCKILSTTRLKILIVTHIN 227

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           H  E + E    I++L   GI LL+QSVLL+GIND+ +IL+ L     ++ I PYYLH  
Sbjct: 228 HAQEINHELQYNINKLHKLGITLLNQSVLLRGINDNAKILSQLSNKLFDINILPYYLHIL 287

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           D    T+HF ++ ++   IV  L   ISG   P  + + PG   K+ I+
Sbjct: 288 DKVKSTTHFYVSEKQASIIVVELLSMISGFLVPKLVCEHPGKNSKIYIN 336


>gi|330862365|emb|CBX72524.1| uncharacterized kamA family protein yjeK [Yersinia enterocolitica
           W22703]
          Length = 328

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P NP+DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 48  MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 106

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           + CR+CFRR       +G   +  +   AL Y+ +  ++ E+IF+GGDPL+     L  +
Sbjct: 107 INCRYCFRRHFPYQDNQG---NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWL 163

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  +  I H++ LR H+R+P+V P RI  EL Q L ++   V +  H NH  E       
Sbjct: 164 LDEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRD 223

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           ++++L  AG+ LL+QSVLL+G+NDD E+LA L  T  +  I PYY+H  D   G +HF +
Sbjct: 224 SMAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMV 283

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 284 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 321


>gi|15834381|ref|NP_313154.1| hypothetical protein ECs5127 [Escherichia coli O157:H7 str. Sakai]
 gi|168747993|ref|ZP_02773015.1| KamA family protein [Escherichia coli O157:H7 str. EC4113]
 gi|168755334|ref|ZP_02780341.1| KamA family protein [Escherichia coli O157:H7 str. EC4401]
 gi|168761014|ref|ZP_02786021.1| KamA family protein [Escherichia coli O157:H7 str. EC4501]
 gi|168766424|ref|ZP_02791431.1| KamA family protein [Escherichia coli O157:H7 str. EC4486]
 gi|168774523|ref|ZP_02799530.1| KamA family protein [Escherichia coli O157:H7 str. EC4196]
 gi|168780577|ref|ZP_02805584.1| KamA family protein [Escherichia coli O157:H7 str. EC4076]
 gi|168784782|ref|ZP_02809789.1| KamA family protein [Escherichia coli O157:H7 str. EC869]
 gi|168802345|ref|ZP_02827352.1| KamA family protein [Escherichia coli O157:H7 str. EC508]
 gi|195935938|ref|ZP_03081320.1| hypothetical protein EscherichcoliO157_05645 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808559|ref|ZP_03250896.1| KamA family protein [Escherichia coli O157:H7 str. EC4206]
 gi|208813031|ref|ZP_03254360.1| KamA family protein [Escherichia coli O157:H7 str. EC4045]
 gi|208818769|ref|ZP_03259089.1| KamA family protein [Escherichia coli O157:H7 str. EC4042]
 gi|209396148|ref|YP_002273691.1| KamA family protein [Escherichia coli O157:H7 str. EC4115]
 gi|217325173|ref|ZP_03441257.1| KamA family protein [Escherichia coli O157:H7 str. TW14588]
 gi|254796168|ref|YP_003081005.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359]
 gi|261225269|ref|ZP_05939550.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255480|ref|ZP_05948013.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK966]
 gi|291285561|ref|YP_003502379.1| KamA family protein [Escherichia coli O55:H7 str. CB9615]
 gi|13364604|dbj|BAB38550.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|187769928|gb|EDU33772.1| KamA family protein [Escherichia coli O157:H7 str. EC4196]
 gi|188017568|gb|EDU55690.1| KamA family protein [Escherichia coli O157:H7 str. EC4113]
 gi|189001809|gb|EDU70795.1| KamA family protein [Escherichia coli O157:H7 str. EC4076]
 gi|189357403|gb|EDU75822.1| KamA family protein [Escherichia coli O157:H7 str. EC4401]
 gi|189363903|gb|EDU82322.1| KamA family protein [Escherichia coli O157:H7 str. EC4486]
 gi|189368518|gb|EDU86934.1| KamA family protein [Escherichia coli O157:H7 str. EC4501]
 gi|189374875|gb|EDU93291.1| KamA family protein [Escherichia coli O157:H7 str. EC869]
 gi|189375646|gb|EDU94062.1| KamA family protein [Escherichia coli O157:H7 str. EC508]
 gi|208728360|gb|EDZ77961.1| KamA family protein [Escherichia coli O157:H7 str. EC4206]
 gi|208734308|gb|EDZ82995.1| KamA family protein [Escherichia coli O157:H7 str. EC4045]
 gi|208738892|gb|EDZ86574.1| KamA family protein [Escherichia coli O157:H7 str. EC4042]
 gi|209157548|gb|ACI34981.1| KamA family protein [Escherichia coli O157:H7 str. EC4115]
 gi|209750478|gb|ACI73546.1| hypothetical protein ECs5127 [Escherichia coli]
 gi|209750480|gb|ACI73547.1| hypothetical protein ECs5127 [Escherichia coli]
 gi|209750482|gb|ACI73548.1| hypothetical protein ECs5127 [Escherichia coli]
 gi|209750484|gb|ACI73549.1| hypothetical protein ECs5127 [Escherichia coli]
 gi|209750486|gb|ACI73550.1| hypothetical protein ECs5127 [Escherichia coli]
 gi|217321394|gb|EEC29818.1| KamA family protein [Escherichia coli O157:H7 str. TW14588]
 gi|254595568|gb|ACT74929.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359]
 gi|290765434|gb|ADD59395.1| KamA family protein [Escherichia coli O55:H7 str. CB9615]
 gi|320190719|gb|EFW65369.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. EC1212]
 gi|320638907|gb|EFX08553.1| putative lysine aminomutase [Escherichia coli O157:H7 str. G5101]
 gi|320644276|gb|EFX13341.1| putative lysine aminomutase [Escherichia coli O157:H- str. 493-89]
 gi|320649594|gb|EFX18118.1| putative lysine aminomutase [Escherichia coli O157:H- str. H 2687]
 gi|320654990|gb|EFX22951.1| putative lysine aminomutase [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320660497|gb|EFX27958.1| putative lysine aminomutase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320665766|gb|EFX32803.1| putative lysine aminomutase [Escherichia coli O157:H7 str. LSU-61]
 gi|326341801|gb|EGD65584.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1125]
 gi|326346624|gb|EGD70358.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1044]
          Length = 342

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 153/273 (56%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 244 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|237729080|ref|ZP_04559561.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908809|gb|EEH94727.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 342

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 151/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  +EE    P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTAQEEFVAAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + A+ YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQVAIDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+S L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITEGLVERFAHSSLQILLVNHINHANEIDETFRQAMSSL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 244 RAAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RRIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336


>gi|91213696|ref|YP_543682.1| hypothetical protein UTI89_C4744 [Escherichia coli UTI89]
 gi|110644505|ref|YP_672235.1| hypothetical protein ECP_4390 [Escherichia coli 536]
 gi|117626495|ref|YP_859818.1| putative lysine aminomutase [Escherichia coli APEC O1]
 gi|191173357|ref|ZP_03034886.1| KamA family protein [Escherichia coli F11]
 gi|218561306|ref|YP_002394219.1| lysine aminomutase [Escherichia coli S88]
 gi|237703813|ref|ZP_04534294.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|300975204|ref|ZP_07172897.1| KamA family protein [Escherichia coli MS 200-1]
 gi|331660724|ref|ZP_08361656.1| putative radical SAM domain protein [Escherichia coli TA206]
 gi|91075270|gb|ABE10151.1| Hypothetical protein YjeK [Escherichia coli UTI89]
 gi|110346097|gb|ABG72334.1| hypothetical protein YjeK (radical SAM superfamily) [Escherichia
           coli 536]
 gi|115515619|gb|ABJ03694.1| putative lysine aminomutase [Escherichia coli APEC O1]
 gi|190906333|gb|EDV65943.1| KamA family protein [Escherichia coli F11]
 gi|218368075|emb|CAR05882.1| putative lysine aminomutase [Escherichia coli S88]
 gi|222035919|emb|CAP78664.1| Uncharacterized kamA family protein yjeK [Escherichia coli LF82]
 gi|226901725|gb|EEH87984.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294490194|gb|ADE88950.1| KamA family protein [Escherichia coli IHE3034]
 gi|300308759|gb|EFJ63279.1| KamA family protein [Escherichia coli MS 200-1]
 gi|307629218|gb|ADN73522.1| putative lysine aminomutase [Escherichia coli UM146]
 gi|312948798|gb|ADR29625.1| putative lysine aminomutase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315288493|gb|EFU47891.1| KamA family protein [Escherichia coli MS 110-3]
 gi|315297615|gb|EFU56892.1| KamA family protein [Escherichia coli MS 16-3]
 gi|323950784|gb|EGB46662.1| KamA family protein [Escherichia coli H252]
 gi|323955577|gb|EGB51340.1| KamA family protein [Escherichia coli H263]
 gi|324015063|gb|EGB84282.1| KamA family protein [Escherichia coli MS 60-1]
 gi|331051766|gb|EGI23805.1| putative radical SAM domain protein [Escherichia coli TA206]
          Length = 342

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPNDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|318607441|emb|CBY28939.1| lysine 2,3-aminomutase [Yersinia enterocolitica subsp. palearctica
           Y11]
          Length = 343

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P NP+DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 63  MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 121

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           + CR+CFRR       +G   +  +   AL Y+ +  ++ E+IF+GGDPL+     L  +
Sbjct: 122 INCRYCFRRHFPYQDNQG---NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWL 178

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  +  I H++ LR H+R+P+V P RI  EL Q L ++   V +  H NH  E       
Sbjct: 179 LDEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRD 238

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           ++++L  AG+ LL+QSVLL+G+NDD E+LA L  T  +  I PYY+H  D   G +HF +
Sbjct: 239 SMAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMV 298

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 299 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 336


>gi|323498137|ref|ZP_08103141.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326]
 gi|323316848|gb|EGA69855.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326]
          Length = 340

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 154/276 (55%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  EE ++      DP+ + +++ + G++H+Y +R L+ +   C + CR
Sbjct: 67  NPFDPLLRQVLPLSEEFDVKQGYSNDPLLEQDNA-IPGLLHKYRNRALMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L Y+Q++ +I EVI +GGDPL+     L+ +++ +
Sbjct: 126 YCFRRHFPYQENKG---SKAVWQQSLDYVQQQPEINEVILSGGDPLMAKDDELRWLVERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             IKH++ +R HSR+P+V P RI  EL++        V +  H NH  E + E   A +R
Sbjct: 183 ADIKHIKRIRIHSRLPVVIPARITDELLEIFSTTRLQVVMVTHVNHAQEINHELRLATAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AGI LL+Q V+LKG+ND  E    L     +  I PYY+H  D   G +HF ++  E
Sbjct: 243 LKLAGITLLNQGVMLKGVNDSIEAQVALSEALFDANILPYYIHVLDKVQGAAHFYISDHE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 AKRIMAGLLERVSGYLVPTLTREIGGRSSKTPLDLH 338


>gi|71276242|ref|ZP_00652521.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon]
 gi|71900995|ref|ZP_00683107.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
 gi|170730740|ref|YP_001776173.1| hypothetical protein Xfasm12_1634 [Xylella fastidiosa M12]
 gi|71163003|gb|EAO12726.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon]
 gi|71729246|gb|EAO31365.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
 gi|167965533|gb|ACA12543.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 357

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 100/267 (37%), Positives = 147/267 (55%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E + +     D +GD       GI+ +Y  RILL     C V+CR+C
Sbjct: 90  HDPLLRQVLPMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYC 149

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    ++  T    +  EAA A+++    I EVI +GGDPL LS  +L ++   LR I
Sbjct: 150 FRRHFPYAED-TASHDRWREAA-AFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRSI 207

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+P+V P+RI+  L++ L     PV   IHANH  EF     AA++ L  
Sbjct: 208 AHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRG 267

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
            G  LL+Q+VLL+G+ND+   LA L        + PYYLH  D  AGT+H+ +     + 
Sbjct: 268 VGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARART 327

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           + A L  ++SG   P ++ ++PG   K
Sbjct: 328 LHAELVARLSGYLVPRFVREVPGDSSK 354


>gi|87310204|ref|ZP_01092336.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645]
 gi|87287194|gb|EAQ79096.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645]
          Length = 346

 Score =  179 bits (453), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 100/273 (36%), Positives = 152/273 (55%), Gaps = 4/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P+DP+  Q +P   EL+       DP+GD+      G++ +Y  R LL     C V+CR
Sbjct: 76  DPHDPLLVQVLPVLRELDSPQGFTVDPVGDDQAVLTPGLLQKYAGRALLVTTGACAVHCR 135

Query: 111 FCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR    ++    V +  D  AALA       I EV+ +GGDPL L+   L ++ + L
Sbjct: 136 YCFRRHFPYAEVPSGVAAWSDAIAALA---ADPSIQEVLLSGGDPLTLADATLAQLAQQL 192

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ +R H+R+PI+ PQRIN +L+  L        + IHANHP E     +AAI R
Sbjct: 193 AAIPHLRRIRVHTRLPIMIPQRINDQLLSWLVGTRLTPIVVIHANHPRELDLPVVAAIDR 252

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+++L+Q+VLL G+NDD ++LA L    ++ R+ PYYLH  D   G +HF +  E 
Sbjct: 253 LNQAGVMVLNQAVLLAGVNDDVDVLAELSERLIDQRVTPYYLHQLDRVKGAAHFEVPRER 312

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           G  ++  L+ ++ G   P Y+ ++ G   K  I
Sbjct: 313 GVDLIRQLRARLPGYAVPRYVEEIAGQPNKTII 345


>gi|194366516|ref|YP_002029126.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194349320|gb|ACF52443.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas
           maltophilia R551-3]
          Length = 346

 Score =  178 bits (452), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 95/266 (35%), Positives = 144/266 (54%), Gaps = 4/266 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +  DP+ RQ +P  EE+   P    D +GD       G++ +Y  R LL     C + CR
Sbjct: 77  DAADPLLRQVLPIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCR 136

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR    G++     +    + A+A I     I EVI +GGDPL L+  +L ++   L
Sbjct: 137 YCFRRHFDYGAENA---AKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDAL 193

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
           R I H++ LR H+R+PIV P+R++ EL+  L     P+ I +HANH  EF     AA++R
Sbjct: 194 RQIPHIRRLRIHTRLPIVLPERVDEELLAWLGGLPWPLAIVVHANHANEFDASVDAAMAR 253

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G  LL+Q+VLL+G+ND  + L +L        + PYYLH  D   G +HF +   +
Sbjct: 254 LRGTGAQLLNQAVLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTQ 313

Query: 290 GQKIVASLKEKISGLCQPFYILDLPG 315
            + ++A L  ++SG   P  + +LPG
Sbjct: 314 AKALIAGLTARLSGYLIPKLVRELPG 339


>gi|187931527|ref|YP_001891511.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147]
 gi|187712436|gb|ACD30733.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147]
          Length = 328

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           I+  + + +    A+ +   N NDP+ +Q +P  +E  I      DP+ + N++ + G++
Sbjct: 37  IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 96

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R+LL     C V+CR+CFR+E     K  +   KD   A  YI     I EVI +
Sbjct: 97  HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+V P+R+  +L++ L E      + 
Sbjct: 155 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           IH NHP E        +  +   GII+L+QS LLK INDD  +L  L    +  ++ PYY
Sbjct: 215 IHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +H  D  +GT H+   ++  + I+  L E  SG   P    ++PG   K  +  H+
Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328


>gi|293609733|ref|ZP_06692035.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828185|gb|EFF86548.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 338

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 149/274 (54%), Gaps = 2/274 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           +N  NP DP+  Q +P   EL   PE   DP+G+   + L G++H+Y  R LL L   C 
Sbjct: 59  MNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V+CR+CFRR      +  +  ++D      YI+    I E+I +GGDPL LS+++L   L
Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIEANPNINEIILSGGDPLTLSNRKLALWL 176

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           + L  +K ++ILR HSRVPIV P RI+ +LI  LK +   + + +H+NH  E  +   + 
Sbjct: 177 ERLSSLKQIEILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLVVHSNHASELDDFTCSK 236

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L++  I +L+Q+VLLKG+ND  + L +L     E R+ PYYLH  D   G  HF L 
Sbjct: 237 LLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYLHVLDKVKGAQHFDLE 296

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
             +   I   +   + G   P  + ++ G   K 
Sbjct: 297 SSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKT 330


>gi|215489493|ref|YP_002331924.1| predicted lysine aminomutase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312965822|ref|ZP_07780048.1| kamA family protein [Escherichia coli 2362-75]
 gi|215267565|emb|CAS12020.1| predicted lysine aminomutase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312289065|gb|EFR16959.1| kamA family protein [Escherichia coli 2362-75]
          Length = 342

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ I  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|208779105|ref|ZP_03246451.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida
           FTG]
 gi|208744905|gb|EDZ91203.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida
           FTG]
          Length = 328

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 152/284 (53%), Gaps = 4/284 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A+ +   N NDP+ +Q +P  +E  I      DP+ + N++ + G++H+Y  R+LL   
Sbjct: 49  FADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQ 108

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C V+CR+CFR+E     K  +   KD   A  YI     I EVI +GGDPL+ + + L
Sbjct: 109 TSCAVHCRYCFRKEF--DYKENIPGRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEIL 166

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +  ++ ++ I H++ LR HSR+P+V P+R+  +L++ L E      + IH NHP E  + 
Sbjct: 167 EFFIENIQQIPHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDDN 226

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
               +  +   GII L+QS LLK INDD  +L  L    +  ++ PYY+H  D  +GT H
Sbjct: 227 VSKVLKEIHKHGIITLNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKH 286

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +   ++  + I+  L E  SG   P    ++PG   K  +  H+
Sbjct: 287 Y--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328


>gi|320193527|gb|EFW68164.1| Lysine 2,3-aminomutase [Escherichia coli WV_060327]
          Length = 342

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ I  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|262278291|ref|ZP_06056076.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202]
 gi|262258642|gb|EEY77375.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202]
          Length = 338

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 152/291 (52%), Gaps = 2/291 (0%)

Query: 32  SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
           S  + + +       +N  NP DP+  Q +P   EL   PE   DP+G+   + L G++H
Sbjct: 44  SEQFKLRVPRAFVGKMNVKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLH 103

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           +Y  R LL L   C V+CR+CFRR      +  +  + D      YI+    I E+I +G
Sbjct: 104 KYQSRFLLTLTGACAVHCRYCFRRHF--PYQENLPKNDDWPNIKNYIEANPHINEIILSG 161

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           GDPL LS++++   L+ L  +K ++ILR HSRVPIV P RI+ ELI  LK +   + + +
Sbjct: 162 GDPLTLSNRKIALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVV 221

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
           H+NH  E  +   + + +L+   I +L+Q+VLLKG+ND  + L +L     E R+ PYYL
Sbjct: 222 HSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYL 281

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           H  D   G  HF L   E   I   +   + G   P  + ++ G   K  +
Sbjct: 282 HVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332


>gi|50122897|ref|YP_052064.1| hypothetical protein ECA3977 [Pectobacterium atrosepticum SCRI1043]
 gi|49613423|emb|CAG76874.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 347

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/290 (34%), Positives = 156/290 (53%), Gaps = 5/290 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A  +   NP+DP+  Q +  + E  + P    DP+ D  HS + G++H+Y 
Sbjct: 51  FALRVPRAFAARMQKGNPDDPLLLQVLTARAEFIVTPGFTHDPL-DEQHSVVPGLLHKYH 109

Query: 95  DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           +R LL +   C V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGD
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWLQALDYIRQHPELDEIIFSGGD 166

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+     L  ++  L +I H++ LR HSR+P+V P RI   L   L  +   V +  H 
Sbjct: 167 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 226

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E   +   +++RL  +G+ LL+QSVLL+G+ND  E LA L     +  I PYYLH 
Sbjct: 227 NHPQEIDPDLTQSMARLRRSGVTLLNQSVLLRGVNDSAETLARLSNALFDAGILPYYLHV 286

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            D   G +HF +   E + +V +L +K+SG   P    ++ G   K  +D
Sbjct: 287 LDKVQGAAHFLVDDNEARVLVKALMKKVSGYLVPRLAREIGGEASKTPLD 336


>gi|153838020|ref|ZP_01990687.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810]
 gi|149748628|gb|EDM59487.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810]
          Length = 340

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 94/275 (34%), Positives = 149/275 (54%), Gaps = 3/275 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  +E  +      DP+ D   + + G++H+Y +R+L+ +   C V CR
Sbjct: 67  NPKDPLLRQVLPLSDEFEVHAGYSNDPL-DEQDNAIPGLLHKYKNRVLMIVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     +  +    +     + Y+ EK ++ EVIF+GGDPL+     +  +L+ + 
Sbjct: 126 YCFRRHFPYQENKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+P+V P RI  EL Q LK +   + +  H NH  E ++E   A+ +L
Sbjct: 184 KIPHIKRLRIHSRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             A + LL+Q VLLKG+ND  + L+ L     +  I PYYLH  D   G +HF +  E  
Sbjct: 244 KEANVTLLNQGVLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           ++++  L E +SG   P    ++ G   K  +D H
Sbjct: 304 RQLMVGLLENVSGYLIPTLTREIGGRKSKTPLDLH 338


>gi|37681287|ref|NP_935896.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016]
 gi|37200038|dbj|BAC95867.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016]
          Length = 340

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/276 (36%), Positives = 153/276 (55%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ +P  EE  I P    DP+ + +++ + G++H+Y +R L+ +   C + CR
Sbjct: 67  NPNDPLLRQVLPVSEEHEIHPGYSVDPLEEQDNA-IPGLLHKYHNRALMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI + S + EVIF+GGDPL+     LQ +++ +
Sbjct: 126 YCFRRHFPYQDNKG---SKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL Q L++    V +  H NH  E + E  + + R
Sbjct: 183 ADIPHIKRLRIHSRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+Q VLLKG+ND  E   +L     +  I PYYLH  D   G +HF ++ +E
Sbjct: 243 LKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            + I+  L  ++SG   P    ++ G   K  +D +
Sbjct: 303 AKAIMRGLITQVSGYLVPTLTREIGGRPSKTPLDLY 338


>gi|294634433|ref|ZP_06712969.1| KamA family protein [Edwardsiella tarda ATCC 23685]
 gi|291092143|gb|EFE24704.1| KamA family protein [Edwardsiella tarda ATCC 23685]
          Length = 342

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 98/280 (35%), Positives = 152/280 (54%), Gaps = 5/280 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P +P DP+ RQ +    E    P    DP+ +  HS + G++H+Y +R LL +   C 
Sbjct: 63  MRPGDPQDPLLRQVMSDAAEFIETPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCA 121

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +GT     + + AL Y++E  ++ E+IF+GGDPL+     L  +
Sbjct: 122 VNCRYCFRRHFPYQENQGT---RANWQRALEYLREHPELDEIIFSGGDPLMAKDHELDWL 178

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
              L  + H++ LR HSR+P+V P R+   L Q + E+   + +  H NH  E  E   A
Sbjct: 179 FSQLESLPHLKRLRIHSRLPVVIPARVTETLCQRMAESRLQMLLVTHINHANEIDEALSA 238

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           A+ RL  AG+ LL+QSVLL+G+ND+ + LA L     +  I PYYLH  D   G +HF +
Sbjct: 239 AMQRLKQAGVTLLNQSVLLRGVNDNADTLAALSNALFDAGILPYYLHVLDRVQGGAHFMV 298

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
             +E + ++  L  ++SG   P    ++ G   K ++D H
Sbjct: 299 PDDEARVLMHGLLARVSGYLVPRLTREIGGEPSKTQLDLH 338


>gi|254369527|ref|ZP_04985538.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122481|gb|EDO66616.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 328

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           I+  + + +    A+ +   N NDP+ +Q +P  +E  I      DP+ + N++ + G++
Sbjct: 37  IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 96

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R+LL     C V+CR+CFR+E     K  +   KD   A  YI     I EVI +
Sbjct: 97  HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+V P+R+  +L++ L E      + 
Sbjct: 155 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H NHP E        +  +   GII+L+QS LLK INDD  +L  L    +  ++ PYY
Sbjct: 215 VHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +H  D  +GT H+   ++  + I+  L E  SG   P    ++PG   K  +  H+
Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328


>gi|254283526|ref|ZP_04958494.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
           NOR51-B]
 gi|219679729|gb|EED36078.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
           NOR51-B]
          Length = 356

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 138/268 (51%), Gaps = 2/268 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P +PNDP+ RQ +    E   +P   EDP+ + + +P  GIVH+Y  R+LL     C 
Sbjct: 76  MRPGDPNDPLLRQVLAVSAEQQHVPGYVEDPLQERDANPTPGIVHKYQGRLLLMPTAACA 135

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V+CR+CFRR          L     + A+ Y+  + ++ EVI +GGDPLIL    L +++
Sbjct: 136 VHCRYCFRRHF--PYADNRLDEGALDRAMDYLASQPEVTEVILSGGDPLILDDAALGRLI 193

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
             L  + H+  LR HSR+P+V P R+   L + L  +     + +H NHP E        
Sbjct: 194 DRLESLGHLSRLRIHSRLPVVLPDRLTEALAERLDASRLSTSLVLHGNHPAEIDAGLTER 253

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + R   A + LL+QSVLL G+NDDP +L  L     E  + PYYLH  D  AG  HF + 
Sbjct: 254 LQRWRPASLTLLNQSVLLAGVNDDPAVLIALSERLFEAGVLPYYLHLLDPVAGVGHFAVA 313

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLP 314
            E+   I   +  K+ G   P    +LP
Sbjct: 314 DEQALAIYRQMAAKLPGYLLPKLARELP 341


>gi|254498454|ref|ZP_05111183.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12]
 gi|254352309|gb|EET11115.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12]
          Length = 328

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 145/279 (51%), Gaps = 3/279 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A  +   NP DP+  Q +    EL I      DP+ + + +PLKG++H+Y  R+LL L 
Sbjct: 49  FAQRMQKGNPQDPLLLQVLAVATELEIQDGYEFDPLRERDSNPLKGLIHKYHGRVLLTLT 108

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            VC V CRFCFRR                +   AYI + S I EVI +GGDPL+ S    
Sbjct: 109 GVCAVNCRFCFRRHFPYQDNNP--GRHGFKDICAYIAKDSSITEVILSGGDPLLASDLVF 166

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
            ++L+ L  I HV  +RFH+R+PIV P+RI+  L+  L        I +H NHP E +++
Sbjct: 167 SELLQQLEQIPHVHTVRFHTRIPIVFPERIDHGLLCVLATTKLKKVIVLHCNHPQELNDD 226

Query: 223 AIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
            +  A+  L  AG  LL+Q+VLL GIND+  ILA L +      + PYYLH  D   G +
Sbjct: 227 EVRHALRALRQAGCHLLNQTVLLSGINDNAPILAALSQALFAQDVIPYYLHILDKVKGAA 286

Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           HF L +   Q I   L++ + G   P    + PG   K 
Sbjct: 287 HFDLPLATVQTIYQQLQQLVPGYLLPRLACEEPGKLSKT 325


>gi|21672314|ref|NP_660381.1| hypothetical protein BUsg020 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|22654299|sp|Q44634|Y020_BUCAP RecName: Full=Uncharacterized KamA family protein BUsg_020
 gi|21622913|gb|AAM67592.1| hypothetical 38.7 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 337

 Score =  177 bits (450), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/271 (36%), Positives = 151/271 (55%), Gaps = 4/271 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A+ +  ++P DP+  Q I + +E     +  EDP+ +     L G++H+Y DR+L  L 
Sbjct: 59  FASRMKKNDPKDPLLLQVITKNQEFLNNLQFNEDPVKEKKDIVLPGLLHKYKDRVLWILK 118

Query: 103 HVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
             C + CR+CFR+       KG   + K+    L YI +  ++ EVI +GGDPL+     
Sbjct: 119 TNCAINCRYCFRKHFPYEKNKG---NKKNWIQILHYISQNIELNEVILSGGDPLMAKDHE 175

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
           L  ++ +L  IKH++ LR H+R+PIV P RI  +L Q    +   + I  H NHP E +E
Sbjct: 176 LLWLITSLSKIKHIKRLRIHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINE 235

Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
           +   ++ +L  + +ILL+QSVLLK IND+  ILA L     E  I PYYLH  D   GTS
Sbjct: 236 QLSDSLLKLKKSNVILLNQSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTS 295

Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           HF ++ ++ + I++ L + ISG   P  + D
Sbjct: 296 HFLVSNKKAKSIISDLMKMISGFLVPRLVFD 326


>gi|241668391|ref|ZP_04755969.1| lysine 2,3-aminomutase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876924|ref|ZP_05249634.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842945|gb|EET21359.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 328

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 158/296 (53%), Gaps = 4/296 (1%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           I+  + + +    AN +   N NDP+ +Q +P  +E  I      DP+ + N++ + G++
Sbjct: 37  ITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLDEKNYNKVPGLL 96

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R+LL     C ++CR+CFR+E     K  +   KD   A  YI     I EVI +
Sbjct: 97  HKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRKDWLKAFEYIANDQTIEEVILS 154

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+V P+R+  +L++ L E      + 
Sbjct: 155 GGDPLLNNDEVLEFFIENIQQISHIKRLRIHSRIPVVLPERMTNKLLKILSEHRLDTVLV 214

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           IH NHP E  +     +  +   GII+L+QS LLK INDD  +L  L    +  ++ PYY
Sbjct: 215 IHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +H  D  +GT H+   ++  + I+  L E  SG   P    ++PG   K  +  H+
Sbjct: 275 IHSLDTVSGTKHY--NVDCAKDIMKKLSEISSGFMVPILTKEIPGYPSKKWLSFHS 328


>gi|123440740|ref|YP_001004732.1| hypothetical protein YE0356 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087701|emb|CAL10486.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 345

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P NP+DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 63  MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 121

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  +   AL Y+++  ++ E+IF+GGDPL+     L  +
Sbjct: 122 VNCRYCFRRHFPYQDNQG---NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWL 178

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  +  I H++ LR H+R+P+V P RI  EL Q L ++   V +  H NH  E       
Sbjct: 179 LDEIENISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHANEIDASFRD 238

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           ++++L  AG+ LL+QSVLL+G+NDD E+LA L     +  I PYY+H  D   G +HF +
Sbjct: 239 SMAQLKRAGVTLLNQSVLLRGVNDDDEVLAALSNALFDAGILPYYIHVLDKVQGAAHFMV 298

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 299 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 336


>gi|160872273|ref|ZP_02062405.1| radical SAM domain protein [Rickettsiella grylli]
 gi|159121072|gb|EDP46410.1| radical SAM domain protein [Rickettsiella grylli]
          Length = 328

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/271 (36%), Positives = 147/271 (54%), Gaps = 4/271 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ +Q +P   E  I  +  +DP+ +N  +PL G++H+Y  RILL +   C + CR
Sbjct: 56  NPADPLLQQVLPIAAEARIQADFSDDPLQENAANPLPGLLHKYYGRILLTMTGACAINCR 115

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR    G  K   +  K   A +AYIQ  + I EVI +GGDPL+     L+  +  L
Sbjct: 116 YCFRRHFPYGKNK---VGGKAWHAIVAYIQADTSIREVILSGGDPLLAQDDYLKHRINDL 172

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I HV+I+R HSR+PIV P+R+   L+  L        +  H NH  E ++    AI +
Sbjct: 173 AAIPHVKIVRIHSRLPIVIPERMTTPLLNALTGTRLQPVLVTHCNHANELNDSVQQAIEK 232

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
                I +L+Q+VLLKG+ND  E L +L     E  I PYYLH  D   G +HF +  E+
Sbjct: 233 CRQRKIHVLNQAVLLKGVNDSVEALVHLSERLFECGILPYYLHRLDKVQGATHFTVNEEK 292

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
            + ++ +L+E++ G   P  + +  G   K+
Sbjct: 293 MKPLLKALRERLPGYLVPKCVYEQAGALSKM 323


>gi|320155059|ref|YP_004187438.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O]
 gi|319930371|gb|ADV85235.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O]
          Length = 340

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 153/276 (55%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ +P  EE  I P    DP+ + +++ + G++H+Y +R L+ +   C + CR
Sbjct: 67  NPNDPLLRQVLPVSEEHEIHPGYSVDPLEEQDNA-IPGLLHKYHNRALMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI + S + EVIF+GGDPL+     LQ +++ +
Sbjct: 126 YCFRRHFPYQDNKG---SKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL Q L++    V +  H NH  E + E  + + R
Sbjct: 183 ADIPHIKRLRIHSRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+Q VLLKG+ND  E   +L     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGVLPYYLHVLDKVQGAAHFYVSDQE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            + I+  L  ++SG   P    ++ G   K  +D +
Sbjct: 303 AKAIMRGLITQVSGYLVPTLTREIGGRPSKTPLDLY 338


>gi|328676803|gb|AEB27673.1| Lysine 2,3-aminomutase [Francisella cf. novicida Fx1]
          Length = 328

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           I+  + + +    A+ +   N NDP+ +Q +P  +E  I      DP+ + N++ + G++
Sbjct: 37  ITKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLDEKNYNKVPGLL 96

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R+LL     C V+CR+CFR+E     K  +   KD   A  YI     I EVI +
Sbjct: 97  HKYHGRVLLIAQISCAVHCRYCFRKEF--DYKENIPGRKDWSKAFEYIANDQSIEEVILS 154

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+V P+R+  +L++ L E      + 
Sbjct: 155 GGDPLLNNDEILEFFIENIQQIVHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           IH NHP E        +  +   GII+L+QS LLK INDD  +L  L    +  ++ PYY
Sbjct: 215 IHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +H  D  +GT H+   ++  + I+  L E  SG   P    ++PG   K  +  H+
Sbjct: 275 IHSLDTVSGTKHY--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328


>gi|323965534|gb|EGB60988.1| KamA family protein [Escherichia coli M863]
 gi|327250088|gb|EGE61807.1| kamA family protein [Escherichia coli STEC_7v]
          Length = 342

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 152/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
              G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336


>gi|283780175|ref|YP_003370930.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
           6068]
 gi|283438628|gb|ADB17070.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
           6068]
          Length = 370

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 96/269 (35%), Positives = 150/269 (55%), Gaps = 2/269 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+  Q +P   E++   +   DP+GD     L G++ +Y  R L+ L   C V+CR
Sbjct: 101 NPADPLLLQVLPVAGEMSSPADFLTDPVGDRESERLPGLLQKYDGRALMILSGSCAVHCR 160

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     +    L+    + A+  I     + EVI +GGDPL +    L ++     
Sbjct: 161 YCFRRHYPYDETPRGLAG--WQPAIDEIAADESVQEVILSGGDPLTIVDSTLAELAHRFA 218

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSRVP+V P+R+N ELI  ++      Y+ +H NHP E      AA++RL
Sbjct: 219 EIPHLKRLRVHSRVPVVIPERVNDELIGWMRGTRLAPYMVVHINHPREIDSAVAAALARL 278

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            +AGI++++Q+VLL+G+ND+ E L  L  T V +R+ PYYL   D  AG +HF +    G
Sbjct: 279 VDAGIVVMNQAVLLRGVNDNFEALHELCETLVNMRVLPYYLSQLDRVAGAAHFLVEESRG 338

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319
           ++++  L+  + G   P Y+ ++PG   K
Sbjct: 339 RELIEQLRASLPGYAIPRYVAEIPGRSSK 367


>gi|218551416|ref|YP_002385208.1| lysine aminomutase [Escherichia fergusonii ATCC 35469]
 gi|218358958|emb|CAQ91618.1| putative lysine aminomutase [Escherichia fergusonii ATCC 35469]
 gi|324112256|gb|EGC06234.1| KamA family protein [Escherichia fergusonii B253]
 gi|325499684|gb|EGC97543.1| lysine aminomutase [Escherichia fergusonii ECD227]
          Length = 342

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|323975512|gb|EGB70613.1| KamA family protein [Escherichia coli TW10509]
          Length = 342

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336


>gi|153825103|ref|ZP_01977770.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149741249|gb|EDM55291.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 340

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|323189972|gb|EFZ75250.1| kamA family protein [Escherichia coli RN587/1]
 gi|324008615|gb|EGB77834.1| KamA family protein [Escherichia coli MS 57-2]
          Length = 342

 Score =  177 bits (448), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|26251039|ref|NP_757079.1| hypothetical protein c5231 [Escherichia coli CFT073]
 gi|227886810|ref|ZP_04004615.1| lysine 2,3-aminomutase [Escherichia coli 83972]
 gi|300975007|ref|ZP_07172811.1| KamA family protein [Escherichia coli MS 45-1]
 gi|301047630|ref|ZP_07194695.1| KamA family protein [Escherichia coli MS 185-1]
 gi|26111471|gb|AAN83653.1|AE016771_164 Hypothetical protein yjeK [Escherichia coli CFT073]
 gi|227836152|gb|EEJ46618.1| lysine 2,3-aminomutase [Escherichia coli 83972]
 gi|300300482|gb|EFJ56867.1| KamA family protein [Escherichia coli MS 185-1]
 gi|300410421|gb|EFJ93959.1| KamA family protein [Escherichia coli MS 45-1]
 gi|307556316|gb|ADN49091.1| hypothetical protein YjeK [Escherichia coli ABU 83972]
 gi|315294049|gb|EFU53401.1| KamA family protein [Escherichia coli MS 153-1]
          Length = 342

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|183179663|ref|ZP_02957874.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|183013074|gb|EDT88374.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 340

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVKLFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|238918348|ref|YP_002931862.1| hypothetical protein NT01EI_0386 [Edwardsiella ictaluri 93-146]
 gi|238867916|gb|ACR67627.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 342

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 150/276 (54%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +PNDP+ RQ +    E    P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  DPNDPLLRQVMSDAAEFIETPGFSTDPLAEQ-HSVVPGLLHKYQNRALLLVKGSCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +GT     + + A+AY+ E  ++ E+IF+GGDPL+     L  +   L
Sbjct: 126 YCFRRHFPYQENQGT---RANWQRAVAYLCEHPELDEIIFSGGDPLMAKDHELDWLFTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             + H++ LR HSR+P+V P R+   L Q + ++   + +  H NH  E  E    A+ R
Sbjct: 183 EQLPHLRRLRIHSRLPVVIPARVTDALCQRMADSRLQMILVTHINHANEIDEALSEAMER 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+GIND+ + LA L     E  I PYYLH  D   G +HF +  +E
Sbjct: 243 LKQAGVTLLNQSVLLRGINDNADTLAALSNALFEAGILPYYLHVLDKVQGGAHFMVPDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++++  L  ++SG   P    ++ G   K  +D H
Sbjct: 303 ARRLMNGLLSRVSGYLVPRLTREIGGEPSKTPLDLH 338


>gi|217077357|ref|YP_002335075.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus
           TCF52B]
 gi|217037212|gb|ACJ75734.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus
           TCF52B]
          Length = 370

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/294 (35%), Positives = 165/294 (56%), Gaps = 13/294 (4%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE--REDP 77
           + +E+ +++K+++  Y          LIN  +PNDPI    IPQ  EL    EE  R D 
Sbjct: 15  LSEEEKNKLKKVTEKYKFRANDYYLKLINWDDPNDPIRNLIIPQIGEL----EEWGRLDA 70

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
             + +++  KG+ H+Y D  LL +  VC  +CRFCFR+ +  +    V+  +D    L Y
Sbjct: 71  SNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINVGEEVV--RDVSEDLEY 128

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE 195
           I++  +I  V+ TGGDPL+L+ K+L+K++  +R I HVQI+R  S++   +P RI  +PE
Sbjct: 129 IKKHKEITNVLLTGGDPLLLATKKLEKIISQIREIDHVQIIRIGSKMVAFNPYRITEDPE 188

Query: 196 LIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           LI+ +K+     K +YI    NHP E ++EAI A++ L  AG IL +Q+ L+KG+N D +
Sbjct: 189 LIELIKKYSTDEKKIYIMTQFNHPREITKEAIKAVNMLQKAGAILANQTPLIKGVNADWK 248

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
            L  L +    + + PYY+      AG   F + +EE  +I       +SGL +
Sbjct: 249 TLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEAYQIFLKAIMNVSGLAK 302


>gi|218702846|ref|YP_002410475.1| putative lysine aminomutase [Escherichia coli IAI39]
 gi|218372832|emb|CAR20711.1| putative lysine aminomutase [Escherichia coli IAI39]
          Length = 342

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ    ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVFTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|254372685|ref|ZP_04988174.1| hypothetical protein FTCG_00250 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570412|gb|EDN36066.1| hypothetical protein FTCG_00250 [Francisella novicida GA99-3549]
          Length = 328

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 152/284 (53%), Gaps = 4/284 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A+ +   N NDP+ +Q +P  +E  I      DP+ + N++ + G++H+Y  R+LL   
Sbjct: 49  FADRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQ 108

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C V+CR+CFR+E     K  +   KD   A  YI     I EVI +GGDPL+ + + L
Sbjct: 109 TSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEIL 166

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +  ++ ++ I H++ LR HSR+P+V P+R+  +L++ L E      + IH NHP E    
Sbjct: 167 EFFIENIQRIAHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGN 226

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
               +  +   GII+L+QS LLK INDD  +L  L    +  ++ PYY+H  D  +GT H
Sbjct: 227 VSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKH 286

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +   ++  + I+  L E  SG   P    ++PG   K  +  H+
Sbjct: 287 Y--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328


>gi|15839064|ref|NP_299752.1| hypothetical protein XF2474 [Xylella fastidiosa 9a5c]
 gi|9107671|gb|AAF85272.1|AE004055_10 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 357

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/267 (37%), Positives = 147/267 (55%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E + +     D +GD       GI+ +Y  RILL     C V+CR+C
Sbjct: 90  HDPLLRQVLPMDAEEDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYC 149

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    ++  T    +  EAA A+++    I EVI +GGDPL LS  +L ++   LR I
Sbjct: 150 FRRHFPYAED-TASHDRWREAA-AFVRADPLIEEVILSGGDPLSLSTAKLVELTDALRSI 207

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+P+V P+RI+  L++ L     PV   IHANH  EF     AA++ L  
Sbjct: 208 PHLKRLRIHSRLPVVLPERIDTPLLEWLGALPWPVAFVIHANHANEFDASVDAALAALRG 267

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
            G  LL+Q+VLL+G+ND+   LA L        + PYYLH  D  AGT+H+ +     + 
Sbjct: 268 VGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARA 327

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           + A L  ++SG   P ++ ++PG   K
Sbjct: 328 LHAELVARLSGYLVPRFVREVPGDSSK 354


>gi|254374142|ref|ZP_04989624.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|151571862|gb|EDN37516.1| conserved hypothetical protein [Francisella novicida GA99-3548]
          Length = 328

 Score =  176 bits (447), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           I+  + + +    A+ +   N NDP+ +Q +P  +E  I      DP+ + N++ + G++
Sbjct: 37  IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLDEKNYNKVPGLL 96

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R+LL     C V+CR+CFR+E     K  +   KD   A  YI     I EVI +
Sbjct: 97  HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+V P+R+  +L++ L E      + 
Sbjct: 155 GGDPLLNNDEILEFFIENIQQIPHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           IH NHP E        +  +   GII+L+QS LLK INDD  +L  L    +  ++ PYY
Sbjct: 215 IHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +H  D  +GT H+   ++  + I+  L E  SG   P    ++PG   K  +  H+
Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328


>gi|238764091|ref|ZP_04625046.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii
           ATCC 33638]
 gi|238697762|gb|EEP90524.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii
           ATCC 33638]
          Length = 335

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P NP+DP+  Q +  +EE    P   +DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 55  MQPGNPSDPLLLQVLTAREEFIAAPGFTDDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  +   AL Y+++  ++ E+IF+GGDPL+     L  +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWL 170

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  +  I H++ LR H+R+P+V P RI  EL Q L  +   V +  H NH  E       
Sbjct: 171 LDEIESISHIKRLRIHTRLPVVIPARITTELCQRLSNSRLQVVMVTHINHANEIDASFRD 230

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           ++++L  AG+ LL+QSVLL+G+N+D E+LA L     +  I PYY+H  D   G +HF +
Sbjct: 231 SMAQLKQAGVTLLNQSVLLRGVNNDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 291 DDDEARQLMKGLLRRVSGYLVPRLTREVGGQPSKTPLD 328


>gi|194437302|ref|ZP_03069400.1| KamA family protein [Escherichia coli 101-1]
 gi|253775226|ref|YP_003038057.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254164078|ref|YP_003047186.1| putative lysine aminomutase [Escherichia coli B str. REL606]
 gi|297521176|ref|ZP_06939562.1| predicted lysine aminomutase [Escherichia coli OP50]
 gi|300929255|ref|ZP_07144732.1| KamA family protein [Escherichia coli MS 187-1]
 gi|194423858|gb|EDX39847.1| KamA family protein [Escherichia coli 101-1]
 gi|242379672|emb|CAQ34495.1| lysine 2,3-aminomutase [Escherichia coli BL21(DE3)]
 gi|253326270|gb|ACT30872.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975979|gb|ACT41650.1| predicted lysine aminomutase [Escherichia coli B str. REL606]
 gi|253980135|gb|ACT45805.1| predicted lysine aminomutase [Escherichia coli BL21(DE3)]
 gi|300462790|gb|EFK26283.1| KamA family protein [Escherichia coli MS 187-1]
 gi|323960335|gb|EGB55974.1| KamA family protein [Escherichia coli H489]
 gi|323970596|gb|EGB65855.1| KamA family protein [Escherichia coli TA007]
          Length = 342

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P R+   L++        + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|225403174|ref|ZP_03760471.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme
           DSM 15981]
 gi|225043179|gb|EEG53425.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme
           DSM 15981]
          Length = 364

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 169/302 (55%), Gaps = 11/302 (3%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +T A++L     +  E+   ++ I  H+ + +T    +LIN  +P DPI R  IP  EE 
Sbjct: 11  ITKAEELRGYLKLSDEETSRLEAILEHFPMTITRYYLSLINWDDPKDPIRRMCIPSIEEN 70

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           ++    + D  G+ +++ L G+ H+Y + +L+   H C +YCR CFR+ +VG        
Sbjct: 71  DMTG--KFDTSGEADNTILPGLQHKYNETVLILSTHRCAMYCRHCFRKRLVGISDD---E 125

Query: 128 SKDTEAALA-YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + D  A +A YI++ ++I   + +GGD  + S+  +++ L+    I+H+ ++RF +R P+
Sbjct: 126 TADNVAEMADYIRQHAEISNALISGGDAFLNSNAVIRRYLELFSDIEHLDLIRFGTRTPV 185

Query: 187 VDPQRI--NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           V P RI  +PEL++ L+     K +Y+    NHP E + EA  A+  L NAG++L +Q+V
Sbjct: 186 VLPARIYDDPELLETLQTYSQRKKIYVVTQFNHPAELTGEAKKAVDALLNAGVVLKNQTV 245

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKI 301
           LLKG+NDD   +  L++      I PYY+      +G   HF++ + EG +IV   K+  
Sbjct: 246 LLKGVNDDGRTMGELLKGLTRWGIAPYYIFQCRPVSGVGGHFQVPLTEGYRIVEEAKQFQ 305

Query: 302 SG 303
           +G
Sbjct: 306 NG 307


>gi|242237917|ref|YP_002986098.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
           Ech703]
 gi|242129974|gb|ACS84276.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
           Ech703]
          Length = 348

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 3/282 (1%)

Query: 42  VIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101
             A  + P +P+DP+ +Q I  K E  + P    DP+ D   S + G++H+Y +R LL +
Sbjct: 58  AFAARMQPGDPDDPLLKQVITSKAEFLLTPGFTNDPL-DEQRSVVPGLLHKYHNRALLLV 116

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
              C V CR+CFRR     +     S  +   AL YI++  ++ E+IF+GGDPL+     
Sbjct: 117 KGGCAVNCRYCFRRHFPYQENQG--SKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHE 174

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
           L  +L  L  I H++ LR HSR+P+V P RI   L   L ++   + +  H NH  E   
Sbjct: 175 LDGLLTGLEEITHLKRLRIHSRLPVVIPARITEALSLRLAQSRLQILLVTHINHANEIDA 234

Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
           E    + RL  AG+ LL+QSVLL+G+ND  + LANL     +  + PYYLH  D   G +
Sbjct: 235 ELAQGLHRLRRAGVTLLNQSVLLRGVNDSADELANLSHALFDAGVMPYYLHVLDKVQGAA 294

Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           HF +  ++   ++ +L  ++SG   P  + ++ G   K  +D
Sbjct: 295 HFLVPDDKATALIKTLMTQVSGYLVPRLVREIGGEASKTPLD 336


>gi|170679776|ref|YP_001746542.1| KamA family protein [Escherichia coli SMS-3-5]
 gi|170517494|gb|ACB15672.1| KamA family protein [Escherichia coli SMS-3-5]
          Length = 342

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 151/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ I  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQIALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
              G+ LL+QSVLL+ +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 244 RRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|229513581|ref|ZP_04403045.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21]
 gi|254285853|ref|ZP_04960815.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|297581499|ref|ZP_06943422.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|150424035|gb|EDN15974.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|229349458|gb|EEO14414.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21]
 gi|297534337|gb|EFH73175.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 340

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPL+     +  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|332304891|ref|YP_004432742.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172220|gb|AEE21474.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 341

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 150/273 (54%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ  P K+E N  P    DP+ + ++S   G++H+Y  R+LL +   C V CR
Sbjct: 67  NPDDPLFRQVFPSKKEFNSDPNYLLDPLQEQSNSK-PGVLHKYQSRVLLLVRGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    S     L+ ++ +  L YI++ S+I EVI++GGDPL+     L  + + + 
Sbjct: 126 YCFRRHFPYSDNH--LNKQEWQETLDYIRQDSKINEVIYSGGDPLMAKDDFLAWLTEEIA 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ +R H+R+P+V P RI PELI+   +      + +H NHP E  +     + +L
Sbjct: 184 QIDHIKRIRIHTRLPVVIPSRITPELIKWFTQTRLKPIMVLHINHPQEIDQSLRDTLQKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+Q VLLK IND  +    L  +  +  + PYYLH  D   G  HF    +  
Sbjct: 244 TQAGVTLLNQGVLLKDINDSADAQVALSESLFDAGVLPYYLHVMDKVQGAQHFDHEDKIA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           + I+A + +++ G   P  + ++ G  GK  ID
Sbjct: 304 KDIMAQMIKRLPGFLVPKLVREIGGQPGKTPID 336


>gi|28199372|ref|NP_779686.1| hypothetical protein PD1491 [Xylella fastidiosa Temecula1]
 gi|182682099|ref|YP_001830259.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23]
 gi|28057478|gb|AAO29335.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
 gi|182632209|gb|ACB92985.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23]
 gi|307578366|gb|ADN62335.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa
           subsp. fastidiosa GB514]
          Length = 342

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 99/267 (37%), Positives = 146/267 (54%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E + +     D +GD       GI+ +Y  RILL     C V+CR+C
Sbjct: 75  HDPLLRQVLPMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYC 134

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    ++  T    +  EAA A+++    I EVI +GGDPL LS  +L ++   LR  
Sbjct: 135 FRRHFPYAED-TASHDRWREAA-AFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGT 192

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+P+V P+RI+  L++ L     PV   IHANH  EF     AA++ L  
Sbjct: 193 PHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRG 252

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
            G  LL+Q+VLL+G+ND+   LA L        + PYYLH  D  AGT+H+ +     + 
Sbjct: 253 VGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARART 312

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           + A L  ++SG   P ++ ++PG   K
Sbjct: 313 LHAELVARLSGYLVPRFVREVPGDSSK 339


>gi|262273034|ref|ZP_06050853.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886]
 gi|262222944|gb|EEY74250.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886]
          Length = 340

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 157/282 (55%), Gaps = 5/282 (1%)

Query: 45  NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
           N +   NP+DP+ RQ +P  EE + +P    DP+ +  +  + G++H+Y +R+L+ +   
Sbjct: 61  NRMEKGNPDDPLLRQVLPVIEEFDEVPGFSTDPLEEQGND-VPGLLHKYKNRVLMIVKGG 119

Query: 105 CPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
           C + CR+CFRR       KG   + ++   A+AY+Q+  ++ EVI +GGDPL+     LQ
Sbjct: 120 CAINCRYCFRRHFPYQDNKGGKSTWRE---AIAYLQQHPEVDEVILSGGDPLMAKDHELQ 176

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
            +++ +  + H++ LR H+R+P+V P R+   L   L  +   + +  H NH  E  +E 
Sbjct: 177 WLIEAIESVPHIKRLRIHTRLPVVIPSRVTVTLANMLATSRLNIVLVTHINHANEIDDEL 236

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
            A ++ L +AG+ LL+Q VLL+G+ND  E L NL     +  I PYYLH  D   G +HF
Sbjct: 237 RAVMATLKHAGVTLLNQGVLLRGVNDSVEALKNLSNRLFDAGILPYYLHVLDKVKGAAHF 296

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            +  E  + +++ L +++SG   P    ++ G   K  +D H
Sbjct: 297 LVDDETARNLMSGLIKEVSGYLVPRLTREIGGRDSKTPLDLH 338


>gi|283834764|ref|ZP_06354505.1| KamA family protein [Citrobacter youngae ATCC 29220]
 gi|291069009|gb|EFE07118.1| KamA family protein [Citrobacter youngae ATCC 29220]
          Length = 342

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 149/273 (54%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E    P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTAQQEFVAEPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQVALDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P RI   L      +   + +  H NH  E  E    A+ RL
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITEGLADRFAHSSLQILLVNHINHANEVDETFRQAMVRL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 244 RTAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336


>gi|254509350|ref|ZP_05121438.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16]
 gi|219547715|gb|EED24752.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16]
          Length = 340

 Score =  176 bits (446), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 99/277 (35%), Positives = 154/277 (55%), Gaps = 7/277 (2%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           NP DP+ RQ +P  +E  +      DP+ +  N +P  G++H+Y +R L+ +   C V C
Sbjct: 67  NPYDPLLRQVLPLSQEFEVHEGYSNDPLQEQGNETP--GLLHKYRNRALMIVKGGCAVNC 124

Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           R+CFRR       KG  L  + +   L YI+++S++ EVI +GGDPL+   + LQ ++  
Sbjct: 125 RYCFRRHFPYQENKGNKLVWQQS---LDYIRQQSELNEVILSGGDPLMAKDEELQWLINH 181

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
           +  I H++ +R HSR+P+V P RI PEL+  L  +   V +  H NH  E + E   A+ 
Sbjct: 182 IADIPHIKRIRIHSRLPVVIPARITPELLAILSGSRLQVIMVTHINHAQEINHELKRAMY 241

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
            L  AG+ LL+Q V+LKG+ND  E    L  T  +  I PYY+H  D   G +HF ++ +
Sbjct: 242 DLKQAGVTLLNQGVMLKGVNDCVEAQVALSETLFDAGILPYYMHVLDKVQGAAHFYISDQ 301

Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           + + I+A L E++SG   P    ++ G   K  +D H
Sbjct: 302 QAKAIMAGLLERVSGYLVPKLTREIGGRKSKTPLDLH 338


>gi|332346225|gb|AEE59559.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 342

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P R+   L++        + +  H NH  E  E    A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
              G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDNVQGAAHFMVSDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|271502194|ref|YP_003335220.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
           Ech586]
 gi|270345749|gb|ACZ78514.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
           Ech586]
          Length = 345

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 161/306 (52%), Gaps = 5/306 (1%)

Query: 19  LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
           L K  Q+   +E  + + + +    A  + P +  DP+  Q +  K+E    P   +DP+
Sbjct: 35  LDKHPQLTAGREARSLFPLRVPRAFAARMRPGDARDPLLLQVLTAKDEFITAPGFSQDPL 94

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAY 137
            D   S + G++H+Y +R LL +   C V CR+CFRR       +G   +  +   AL Y
Sbjct: 95  -DEQQSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDY 150

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
           I++  Q+ E+IF+GGDPL+     L  +L  L  I H++ LR H+R+P+V P RI  EL 
Sbjct: 151 IRQHPQLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLRIHTRLPVVIPARITAELC 210

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
           Q L ++   V +  H NH  E + E   +++RL  AG+ LL+QSVLL+GIND  + L  L
Sbjct: 211 QRLAQSPLQVVLVTHINHANEINAELTDSMARLRRAGVTLLNQSVLLRGINDRVDTLVAL 270

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
                +  I PYYLH  D   G +HF +  +E + +V  L  ++SG   P    ++ G  
Sbjct: 271 SNALFDAGILPYYLHVLDKVQGAAHFLVPDDEARTLVRGLMTQVSGYLVPNLTREIGGEA 330

Query: 318 GKVKID 323
            K  +D
Sbjct: 331 SKTLLD 336


>gi|229521724|ref|ZP_04411142.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80]
 gi|229341318|gb|EEO06322.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80]
          Length = 340

 Score =  176 bits (445), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPL+     +  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEVNLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTLDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|167627832|ref|YP_001678332.1| lysine 2,3-aminomutase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597833|gb|ABZ87831.1| Lysine 2,3-aminomutase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 328

 Score =  176 bits (445), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 95/296 (32%), Positives = 156/296 (52%), Gaps = 4/296 (1%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           I+  + + +    AN +   N NDP+ +Q +P  +E  I      DP+ + N++ + G++
Sbjct: 37  ITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLDEKNYNKVPGLL 96

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R+LL     C ++CR+CFR+E     K  +   KD   A  YI     I EVI +
Sbjct: 97  HKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRKDWLKAFEYIANDQTIEEVILS 154

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+ + + L+  ++ ++ I H++  R HSR+P+V P+R+   L++ L E      + 
Sbjct: 155 GGDPLLNNDEVLEFFIENIQRISHIKRFRIHSRIPVVLPERMTNRLLKILSEHRLDTVLV 214

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           IH NHP E  +     +  +   GII+L+QS LLK INDD  +L  L    +  ++ PYY
Sbjct: 215 IHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +H  D  +GT H+   ++  + I+  L E  SG   P    ++PG   K  +  H+
Sbjct: 275 IHSLDTVSGTKHY--NVDCAKDIMKKLSEISSGFMVPILTKEIPGYPSKKWLSFHS 328


>gi|160901658|ref|YP_001567239.1| lysine 2,3-aminomutase [Petrotoga mobilis SJ95]
 gi|160359302|gb|ABX30916.1| Lysine 2,3-aminomutase [Petrotoga mobilis SJ95]
          Length = 370

 Score =  175 bits (444), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 99/305 (32%), Positives = 168/305 (55%), Gaps = 12/305 (3%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER--EDP 77
           I +E++ E++ +   Y         +LIN  + NDPI +  IP  EEL    EE   ED 
Sbjct: 15  ISQEELKELQPVEEKYKFRANEYYLDLINWKDKNDPIRKIIIPSVEEL----EEWGLEDA 70

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
             +++++  KG+ H+Y D  LL +  VC  +CRFCFR+ +  +    V+ +++ +  L Y
Sbjct: 71  SREHSYTISKGLQHKYRDTALLLVNDVCGSFCRFCFRKRLFKNVGKEVVRTREIDKDLDY 130

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-- 195
           I++  +I  V+ TGGDPL+LS  +L+ +++++  I H++I+R  ++ P  +P RI  +  
Sbjct: 131 IRKHEEITNVLLTGGDPLLLSTNKLKSIIESINEIDHIKIIRIGTKTPAFNPFRIISDDA 190

Query: 196 ---LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
              LI+ +  +GK +Y  +H NHP E +  +I  I+ L N+G I+ +Q+ LL GIND+P+
Sbjct: 191 LSNLIKKITNSGKKLYFIVHFNHPRELTSASIQGINILQNSGAIIANQTPLLHGINDNPK 250

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ-PFYIL 311
            L+ L +      I PYY+       G   F + +E+   I     E ISGL + P +++
Sbjct: 251 TLSTLFKKLSFNGIPPYYVFQNRPVMGNKGFTIPLEKAYSIFLESLEDISGLAKRPRFVM 310

Query: 312 DLPGG 316
               G
Sbjct: 311 SHESG 315


>gi|269137690|ref|YP_003294390.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202]
 gi|267983351|gb|ACY83180.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202]
 gi|304557746|gb|ADM40410.1| hypothetical protein ETAF_0286 [Edwardsiella tarda FL6-60]
          Length = 342

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +PNDP+ RQ +    E    P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  DPNDPLLRQVMSDAAEFIETPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +GT     + + A+AY+ E  ++ E+IF+GGDPL+     L  +   L
Sbjct: 126 YCFRRHFPYQENQGT---RANWQRAVAYLHEHPELDEIIFSGGDPLMAKDHELDWLFTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             + H++ LR HSR+P+V P R+   L Q + ++   + +  H NH  E  E    A+ R
Sbjct: 183 EQLPHLRRLRIHSRLPVVIPARVTDALCQRMADSRLQMVLVTHINHANEIDEALSEAMGR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+G+ND  + LA L     +  I PYYLH  D   G +HF +  +E
Sbjct: 243 LKQAGVTLLNQSVLLRGVNDSADTLAALSNALFDAGILPYYLHVLDKVQGGAHFMVPDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++++  L  ++SG   P    ++ G   K ++D H
Sbjct: 303 ARRLMHGLLAQVSGYLVPRLTREIGGEPSKTQLDLH 338


>gi|163783207|ref|ZP_02178201.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881541|gb|EDP75051.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 375

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/292 (34%), Positives = 164/292 (56%), Gaps = 10/292 (3%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           +K  + +E+K++++ ++        +LIN  +P DPI R  IP  EEL++  +       
Sbjct: 17  LKDREKEELKQVTDKFAFRTNDYYNSLINWDDPEDPIRRIVIPTTEELDVWGKLHAS--N 74

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           ++ +  + G+ H+YPD  LL +  VC +YCRFCFR+ +  +    V  ++D    L YI+
Sbjct: 75  ESKYMKVHGLEHKYPDTALLLVTDVCGIYCRFCFRKRLFMNDNDEV--ARDVSEGLEYIR 132

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
              +I  V+ TGGDPL+L+  +L+K LK L  I HV+I+R  S++  V+P R+  +P L+
Sbjct: 133 NHPEINNVLLTGGDPLVLATFKLEKTLKALAEIPHVRIVRIGSKMLAVNPFRVIDDPSLL 192

Query: 198 QCLK----EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
           +  +    E GK +Y+  H NHP E ++EA  A+  +   G  L +Q+ +LKGIND+ E 
Sbjct: 193 ELFEWFNTETGKKLYLMNHFNHPRELTKEARKAVELVQKTGTTLTNQTPILKGINDNEET 252

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           L  L+     + + PYY+      AG   +   IEE   +V S++ K+SGL 
Sbjct: 253 LRELLEELSFMGVPPYYVFQCRPTAGNKTYSTKIEETIDLVESVRSKVSGLA 304


>gi|15804738|ref|NP_290779.1| hypothetical protein Z5751 [Escherichia coli O157:H7 EDL933]
 gi|12519128|gb|AAG59345.1|AE005648_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
          Length = 342

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDP +     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPXMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++  R HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRXRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|74314635|ref|YP_313054.1| hypothetical protein SSON_4330 [Shigella sonnei Ss046]
 gi|73858112|gb|AAZ90819.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 342

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DPI RQ +  ++E  +      DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPILRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|59712946|ref|YP_205722.1| lysine aminomutase [Vibrio fischeri ES114]
 gi|59481047|gb|AAW86834.1| predicted lysine aminomutase [Vibrio fischeri ES114]
          Length = 340

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 153/276 (55%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  +E  +      DP+ + ++  L G++H+Y +R+LL +   C V CR
Sbjct: 67  NPFDPLLRQVLPLDQEFEVHEGYSNDPLEEQDNQQL-GLLHKYKNRVLLIVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + ++ YI    +I EVIF+GGDPL+     LQ ++  +
Sbjct: 126 YCFRRHFPYQDNKG---SKTIWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIDHI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI   L Q   +    + +  H NH  E ++E I+++ +
Sbjct: 183 EAIPHIKRLRIHSRLPVVIPNRITDTLCQLFTKTRLQIILVTHINHANEINQELISSMHK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  A + LL+QSVLLKG+ND+ + L  L     +  I PYYLH  D   G +HF ++ E+
Sbjct: 243 LKLAHVTLLNQSVLLKGVNDNADTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDEK 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            +++++ L E +SG   P    ++ G   K  +D +
Sbjct: 303 AKQLMSELIENVSGYLVPTLAREIGGRKSKTPLDLY 338


>gi|27364664|ref|NP_760192.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6]
 gi|27360809|gb|AAO09719.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6]
          Length = 340

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ +P  EE  I P    DP+ + +++ + G++H+Y +R L+ +   C + CR
Sbjct: 67  NPNDPLLRQVLPVSEEHEIHPGYSVDPLEEQDNA-IPGLLHKYHNRALMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI + S + EVIF+GGDPL+     LQ +++ +
Sbjct: 126 YCFRRHFPYQDNKG---SKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI   L Q L++    V +  H NH  E + E  + + R
Sbjct: 183 ADIPHIKRLRIHSRLPVVIPARITTALCQLLEQTRLQVILVTHINHANEINAELTSQLHR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+Q VLLKG+ND  E   +L     +  I PYYLH  D   G +HF ++ +E
Sbjct: 243 LKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            + I+  L  ++SG   P    ++ G   K  +D +
Sbjct: 303 AKAIMHGLITQVSGYLVPTLTREIGGRPSKTPLDLY 338


>gi|71066234|ref|YP_264961.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4]
 gi|71039219|gb|AAZ19527.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4]
          Length = 335

 Score =  175 bits (444), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 151/276 (54%), Gaps = 2/276 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P ++E   +     DP+ +N H+P+KG++H+Y  R+LL L   C ++CR+C
Sbjct: 62  DDPLLRQVLPHQKERITVAGYVADPLAENAHNPVKGVLHKYQSRLLLTLTGACAIHCRYC 121

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FR+    S      S+K  +  + YI    +I E+I +GGDPL ++++RL   L TL  I
Sbjct: 122 FRQHFDYSANMPTASAK--QDIIDYISAHPEINEIILSGGDPLNVTNRRLFAWLDTLEAI 179

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
           + +  +R H+R+P+V P R++  L++ L ++   + + IH NH  E        + R   
Sbjct: 180 EQLTTIRIHTRLPLVIPARLDDALLERLAQSCCQIVMVIHGNHANEIDTLTAEYLRRARA 239

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AGI LL+Q+VLLKGIND       L +      + PYYLH  D  AG +HF        +
Sbjct: 240 AGITLLNQAVLLKGINDSVSAQMALSQRLFAAGVLPYYLHVLDKVAGAAHFDRDERSAIE 299

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIK 328
           +  SL  K+ G   P  + +LP    KV I+ +N K
Sbjct: 300 LYWSLLAKLPGYLVPKLVRELPNKPFKVPINVYNDK 335


>gi|260913742|ref|ZP_05920218.1| KamA family protein [Pasteurella dagmatis ATCC 43325]
 gi|260632281|gb|EEX50456.1| KamA family protein [Pasteurella dagmatis ATCC 43325]
          Length = 337

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/258 (39%), Positives = 141/258 (54%), Gaps = 5/258 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+  Q +   +E   +     DP+ +   + +  ++H+Y +R+LL +   C V CR
Sbjct: 67  NPKDPLFLQVMSSADEFIQVEGFTTDPL-EEQEAVVPSVLHKYHNRLLLMVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +  + + AL YI  + +I EVIF+GGDPL+     L  ++K L
Sbjct: 126 YCFRRHFPYADNKG---NKVNWQKALDYIAIRPEIEEVIFSGGDPLMAKDHELNWLIKNL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H+Q LR H+R+P+V PQRI PEL + L E+     +  H NHP E      AAI +
Sbjct: 183 ENIPHLQRLRIHTRLPVVIPQRITPELCKILSESRFQTVLVTHINHPNEIDTTLSAAIFK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG++LL+QSVLLK INDD +IL  L      + I PYYLH  D   G SHF +  E+
Sbjct: 243 LKQAGVVLLNQSVLLKNINDDAQILKQLSDKLFSINILPYYLHLLDKVEGASHFYIEDEK 302

Query: 290 GQKIVASLKEKISGLCQP 307
              I   L+   SG   P
Sbjct: 303 ALNIYKILQSITSGYLVP 320


>gi|327485135|gb|AEA79542.1| Lysine 2,3-aminomutase [Vibrio cholerae LMA3894-4]
          Length = 340

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPADPLLRQVLPLSAEFVIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPL+     +  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|323166756|gb|EFZ52513.1| kamA family protein [Shigella sonnei 53G]
          Length = 320

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DPI RQ +  ++E  +      DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 45  NPDDPILRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 103

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 104 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 160

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 161 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 220

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 221 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 280

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 281 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 314


>gi|183598065|ref|ZP_02959558.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827]
 gi|188022847|gb|EDU60887.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827]
          Length = 342

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P DP+  Q +  K E +  P    DP+ + N++ +  ++H+Y +R L+ +   C V CR
Sbjct: 67  DPQDPLLLQVLTAKAEFDTYPGFSTDPLDEQNNA-IPSLLHKYHNRALMLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +  +   A+ YI+  +++ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYEDNKG---NKNNWLIAVDYIKNHTELNEIIFSGGDPLMAKDSELDWLIGQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P+RI   L Q L  +   V +  H NH  E  +   AA+ +
Sbjct: 183 EAIPHIKRLRIHSRLPVVIPERITTNLCQRLAHSRLQVIMVTHLNHANEIDDHFKAAMQK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L NAG+ LL+QSVLL+G+N+D + LANL     +  I PYYLH  D   G +HF ++ +E
Sbjct: 243 LKNAGVTLLNQSVLLRGVNNDADTLANLSNALFDAGILPYYLHVLDKVQGAAHFLVSDQE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + ++  L  K+SG   P    ++ G   K  +D
Sbjct: 303 ARLLIQQLLGKVSGYLVPKLAREIGGEPSKTLLD 336


>gi|229527414|ref|ZP_04416806.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)]
 gi|229335046|gb|EEO00531.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)]
          Length = 340

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 151/276 (54%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVI +GGDPL+     L  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVEMFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|238757499|ref|ZP_04618684.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC
           35236]
 gi|238704261|gb|EEP96793.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC
           35236]
          Length = 284

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 155/284 (54%), Gaps = 5/284 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P NP+DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 1   MQPGNPSDPLLLQVLTAQEEFITAPGFTTDPL-DEQRSVVPGLLHKYRNRALLLVKSGCA 59

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGDPL+ +   L  +
Sbjct: 60  VNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEIIFSGGDPLMANDSELSWL 116

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  +  I H++ LR H+R+P+V P RI   L Q L  +   V +  H NH  E  +    
Sbjct: 117 LDEIESISHIKRLRIHTRLPVVIPARITANLCQRLSNSRLQVLMVTHINHANEIDQSLRN 176

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           ++++L  AG+ LL+QSVLL+G+N+D ++LA L     +  I PYY+H  D   G +HF +
Sbjct: 177 SMAQLKRAGVTLLNQSVLLRGVNNDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMV 236

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
             +E ++++  L  ++SG   P    ++ G   K  +D   I+ 
Sbjct: 237 DDDEARQLMKGLLSRVSGYLVPRLTREIGGEPSKTPLDLRLIQS 280


>gi|308189049|ref|YP_003933180.1| hypothetical protein Pvag_3613 [Pantoea vagans C9-1]
 gi|308059559|gb|ADO11731.1| Uncharacterized kamA family protein [Pantoea vagans C9-1]
          Length = 342

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/273 (35%), Positives = 152/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           + +DP+  Q + +++E    P    DP+ D   + + G++H+Y +R LL +   C V CR
Sbjct: 67  DAHDPLLLQVLTRRQEFIDAPGYSTDPL-DEQSNVVPGLLHKYRNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR      +    + +  +AAL YI +  ++ E+IF+GGDPL+     L  ++  L 
Sbjct: 126 YCFRRHF--PYQDNPGNKRSWQAALDYIADHPELDEIIFSGGDPLMAKDHELAWLIAALE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+P+V P RI  +L Q L E    V +  H NH  E  +E   A+S L
Sbjct: 184 KIPHLKRLRIHSRLPVVIPARITDQLCQMLSETRLQVLMVTHINHAQEIDDELREAMSSL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+QSVLL+GIND+ + LA L     +  I PYYLH  D   G +HF ++ EE 
Sbjct: 244 KRAGVTLLNQSVLLRGINDNSQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +++V +L  ++SG   P    ++ G   K  +D
Sbjct: 304 RQLVRALLSQVSGYLVPKLAREIGGEPSKTPLD 336


>gi|114319844|ref|YP_741527.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226238|gb|ABI56037.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 348

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/242 (39%), Positives = 135/242 (55%), Gaps = 7/242 (2%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I P +P+DP+ RQ +P   E         DP+GD       G++H+Y  R+LL     C 
Sbjct: 61  IRPGDPDDPLLRQVLPLAAEHETPAGFTADPVGDAAAEANPGLLHKYHGRVLLITTGACA 120

Query: 107 VYCRFCFRREM--VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           ++CR+CFRR      SQ G      D  A LA++    ++ EVI +GGDPL LS +RL  
Sbjct: 121 IHCRYCFRRHFPYTESQAG----RDDWRATLAWLDAHPEVDEVILSGGDPLTLSDRRLAT 176

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
           + + L     V+ LR H+R+P+V P RI P L+  LK   + V++ IH+NH  E      
Sbjct: 177 LTEALAQRPQVRRLRLHTRLPVVLPDRITPGLMALLKGPWEVVWV-IHSNHAQELDSTVA 235

Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
            A++RL  AG  LL+Q+VLL+ INDD + LA L R   +L + PYYLH  D   G +HF 
Sbjct: 236 GALARLREAGHWLLNQTVLLRRINDDADTLAALSRQLFQLGVLPYYLHLLDRVQGAAHFE 295

Query: 285 LT 286
           +T
Sbjct: 296 VT 297


>gi|294495163|ref|YP_003541656.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
 gi|292666162|gb|ADE36011.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
          Length = 358

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/300 (32%), Positives = 174/300 (58%), Gaps = 11/300 (3%)

Query: 18  NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
           NL + E+ + IK +  H+    TP  A+L++  +P  PI +Q +P  +E +     ++  
Sbjct: 24  NLTESER-EAIKTLDTHW--GTTPYFASLMDKDDPECPIRKQVVPSLQESHNKYGMKDYL 80

Query: 78  IGDNNHSPLK----GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           +   N +  +     I  +Y DR+   +   C +YCR CFR+E+V S    +    + + 
Sbjct: 81  VWKENRATEEVRPDSIARQYKDRVAFTVFQECGIYCRHCFRKELVVSHDLKL--DFNVDD 138

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
            + +I++  ++ +V+ TGGDPL+LS ++++ ++++LR I HV+++R  SR+PIV P RI 
Sbjct: 139 GIEWIRQHPEVRDVLITGGDPLLLSDEKIEYIIESLRDIPHVEMIRIGSRLPIVLPHRIT 198

Query: 194 PELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
             L + L      P+++    NHP E +++   A+  L +AG+ + +Q+VLLKGINDD +
Sbjct: 199 DNLKRILGGYHDVPIWLNTQCNHPKEITDKTKRAVYDLVSAGVNVGNQAVLLKGINDDVQ 258

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKISGLCQPFYIL 311
            + +L +  +  RI+PYYL + + A G  HFR  +E+G +++   L+   +GL QP Y++
Sbjct: 259 TIRDLHQKLLTARIRPYYLFYCEPAPGIDHFRTPVEKGAELIRDGLRGHTTGLAQPMYVI 318


>gi|258620467|ref|ZP_05715505.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258587346|gb|EEW12057.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 340

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 151/276 (54%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  + P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPYDPLLRQVLPLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 ATIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+N+  E    L  T  +  I PYYLH  D   G +HF ++ +E
Sbjct: 243 LRAVNVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQIMAGLIERVSGYLIPKLTREIGGKPSKTPLDLH 338


>gi|89902650|ref|YP_525121.1| hypothetical protein Rfer_3891 [Rhodoferax ferrireducens T118]
 gi|89347387|gb|ABD71590.1| L-lysine 2,3-aminomutase [Rhodoferax ferrireducens T118]
          Length = 393

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 165/309 (53%), Gaps = 6/309 (1%)

Query: 25  IDEIKE-ISNHYSIALTPVIANLINPHNPNDPIARQFIPQK-EELNILPEEREDPIGDNN 82
           I+ + E +   ++IA+TP +A L++  +PN PI  Q++P   EE         D +G+  
Sbjct: 50  IENVNETVYKKFAIAITPYMAKLMDRDDPNCPIRLQYLPSHFEETKPGFATSLDQLGEEG 109

Query: 83  HS-PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
            + P   +VHRYP R+L  + + C   CRFC R+ MV    G+V +  + EA++ YI   
Sbjct: 110 DTVPGTSVVHRYPRRVLFLVSNTCATLCRFCTRKRMVSQPDGSV-AKDEIEASIDYIAGN 168

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCL 200
             I +V+ +GGDP   + +RL  +L  LR    HV+ LR  SR+ +  P R+ PEL   L
Sbjct: 169 QDIEDVLLSGGDPFTFTDERLDYILGELRRRAPHVRFLRIGSRMVVQMPTRVTPELCAVL 228

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
            E  +   + IH NHP E +      +  +  AGI++  Q+V LKG+NDD  ++  L   
Sbjct: 229 -EKHRVQMVNIHINHPKEITPLLRERVKMIQKAGIMMGLQTVCLKGVNDDVAVMRELFMQ 287

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
            +E+ ++PYY++  D+  G  HF +      ++   L+  ISG   P +++D  GG GK+
Sbjct: 288 TIEMGVRPYYVYSTDMVEGAHHFIVPHRRMLELYEGLRGWISGPAIPTFVVDGLGGLGKL 347

Query: 321 KIDTHNIKK 329
            I    +++
Sbjct: 348 PITPSYVRE 356


>gi|330906439|ref|XP_003295474.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1]
 gi|311333210|gb|EFQ96428.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1]
          Length = 526

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/320 (32%), Positives = 172/320 (53%), Gaps = 22/320 (6%)

Query: 36  SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
           +I LTP + +L++   P +DPI +QF+P +    I+P+ +    D + + + SP+ G+VH
Sbjct: 114 AIRLTPHVLSLVDWTKPLDDPIRKQFLPLRS--GIIPDHKHLELDSLHEEDDSPVPGLVH 171

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL------SSKDTEAALAYIQEKSQIW 145
           RYP R L     +CPVYCRFC R   VG+   TV       S K  E    +I++   + 
Sbjct: 172 RYPGRALFLATSICPVYCRFCTRSYAVGANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQ 231

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI----NP------E 195
           +++ +GGD   L    +++++  L  I H++ +R  S+   V P RI    +P      E
Sbjct: 232 DIVVSGGDAYFLQPDHVKEIVYRLLNIPHIRRIRLASKGLAVAPGRILDDADPWTDALIE 291

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
           +    +E GK V +  H NH  E +     A ++L   G+I+ +QSVLLKG+N+  + L 
Sbjct: 292 VSNKGREMGKQVCLHTHINHANEITWITRLAANKLFKHGVIVRNQSVLLKGVNNHKDTLL 351

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
           +L++T  ++ I+PYY++  D+  G    R  ++E   +   L+ K+SG   P +++DLPG
Sbjct: 352 DLIKTLADINIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKDLRGKLSGFMMPSFVIDLPG 411

Query: 316 GYGKVKIDTHNIKKVGNGSY 335
           G GK  + T    K G  +Y
Sbjct: 412 GGGKRLVSTVESYKNGEATY 431


>gi|93006773|ref|YP_581210.1| hypothetical protein Pcryo_1949 [Psychrobacter cryohalolentis K5]
 gi|92394451|gb|ABE75726.1| L-lysine 2,3-aminomutase [Psychrobacter cryohalolentis K5]
          Length = 335

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 2/276 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P  +E   +     DP+ +N H+P+KG++H+Y  R+LL +   C ++CR+C
Sbjct: 62  DDPLLRQVLPNHKEQMAVAGYVADPLAENAHNPVKGVLHKYQSRLLLTITGACAIHCRYC 121

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FR+    S      S+K  +  + YI    +I EVI +GGDPL ++++RL   L TL  I
Sbjct: 122 FRQHFDYSANMPTASAK--QDIIDYISAHPEINEVILSGGDPLNVTNRRLFAWLDTLEAI 179

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
             +  +R H+R+P+V P R++  L++ L ++   + + IH NH  E        + R   
Sbjct: 180 GQLTTIRIHTRLPLVIPARLDDALLERLAQSRCQIVMVIHGNHANEIDALTAEYLQRARA 239

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AGI LL+Q+VLLKGIND       L +      + PYYLH  D  AG +HF    E   +
Sbjct: 240 AGITLLNQAVLLKGINDSVSAQTALSQRLFAAGVLPYYLHVLDKVAGAAHFDSDEEFAIE 299

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIK 328
           +  SL  K+ G   P  + +LP    KV I+ +N K
Sbjct: 300 LYWSLLAKLPGYLVPKLVRELPNEPFKVPINVYNNK 335


>gi|238796052|ref|ZP_04639563.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC
           43969]
 gi|238719997|gb|EEQ11802.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC
           43969]
          Length = 335

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P +P+DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 55  MQPGDPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGDPL+     L  +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWL 170

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  L  I H++ LR H+R+P+V P RI   L Q L ++   V +  H NH  E  +    
Sbjct: 171 LDELESISHIKRLRIHTRLPVVIPARITAALCQRLGDSRLQVLMVTHINHTNEIDQSLRD 230

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           ++++L  AG+ LL+QSVLL+G+NDD ++LA L     +  I PYY+H  D   G +HF +
Sbjct: 231 SMAQLKQAGVTLLNQSVLLRGVNDDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMV 290

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 328


>gi|85058286|ref|YP_453988.1| hypothetical protein SG0308 [Sodalis glossinidius str. 'morsitans']
 gi|84778806|dbj|BAE73583.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 342

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 148/273 (54%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P+DP+ RQ I  +EE +  P    DP+ D  HS + G++H+Y +R L+ +   C V CR
Sbjct: 67  DPDDPLLRQVITAREEFDPTPGYSTDPL-DEQHSVVPGLLHKYQNRALMLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     +     +  +   A AYI++  ++ E+I +GGDPL+     L +++  L 
Sbjct: 126 YCFRRHFPYQENQG--NKTNWLRAAAYIRQHPELNEIILSGGDPLMAKDHELDELICLLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+P+V P RI   L Q L      V +  H NH  E       +++RL
Sbjct: 184 EIPHLKTLRIHSRLPVVIPARITARLCQRLAGCRLKVVLVTHINHAREIDAALCDSMTRL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            NA + LL+QSVLL+G+ND  + LA L        I PYYLH  D   G +HF +  ++ 
Sbjct: 244 RNARVTLLNQSVLLRGVNDSADTLAALSEALFAAGILPYYLHVLDRVQGAAHFMVEDKQA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L EK+SG   P    ++ G   K  +D
Sbjct: 304 REIMQQLLEKVSGYLVPRLAREIGGERSKTPLD 336


>gi|30065523|ref|NP_839694.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T]
 gi|30043787|gb|AAP19506.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T]
 gi|281603612|gb|ADA76596.1| KamA family protein [Shigella flexneri 2002017]
 gi|313646382|gb|EFS10844.1| kamA family protein [Shigella flexneri 2a str. 2457T]
 gi|332749021|gb|EGJ79444.1| kamA family protein [Shigella flexneri K-671]
 gi|332749289|gb|EGJ79710.1| kamA family protein [Shigella flexneri 4343-70]
 gi|332761892|gb|EGJ92166.1| kamA family protein [Shigella flexneri 2747-71]
 gi|332763192|gb|EGJ93435.1| kamA family protein [Shigella flexneri 2930-71]
 gi|333009379|gb|EGK28835.1| kamA family protein [Shigella flexneri K-218]
 gi|333011918|gb|EGK31303.1| kamA family protein [Shigella flexneri K-304]
          Length = 342

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  +      DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|193067826|ref|ZP_03048792.1| KamA family protein [Escherichia coli E110019]
 gi|192958801|gb|EDV89238.1| KamA family protein [Escherichia coli E110019]
          Length = 342

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  +      DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|333012676|gb|EGK32056.1| kamA family protein [Shigella flexneri K-227]
          Length = 342

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  +      DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGKPSKTPLD 336


>gi|118497318|ref|YP_898368.1| hypothetical protein FTN_0722 [Francisella tularensis subsp.
           novicida U112]
 gi|195536004|ref|ZP_03079011.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis
           subsp. novicida FTE]
 gi|118423224|gb|ABK89614.1| aminomutase [Francisella novicida U112]
 gi|194372481|gb|EDX27192.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis
           subsp. novicida FTE]
          Length = 328

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 151/284 (53%), Gaps = 4/284 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A+ +   N NDP+ +Q +P  +E  I      DP+ + N++ + G++H+Y  R+LL   
Sbjct: 49  FADRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQ 108

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C V+CR+CFR+E     K  +   KD   A  YI     I EVI +GGDPL+ + + L
Sbjct: 109 TSCAVHCRYCFRKEF--DYKENIPGRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEIL 166

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +  ++ ++ I H++ LR H+R+PIV P+R+  +L++ L E      + IH NHP E    
Sbjct: 167 EFFIENIQRIAHIKRLRIHTRIPIVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGN 226

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
               +  +   GII L+QS LLK INDD  +L  L    +  ++ PYY+H  D  +GT H
Sbjct: 227 VSKVLKEIHKHGIITLNQSTLLKYINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKH 286

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +   ++  + I+  L E  SG   P    ++PG   K  +  H+
Sbjct: 287 Y--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328


>gi|15642656|ref|NP_232289.1| hypothetical protein VC2661 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121590925|ref|ZP_01678247.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121727598|ref|ZP_01680706.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147674649|ref|YP_001218151.1| hypothetical protein VC0395_A2235 [Vibrio cholerae O395]
 gi|153819801|ref|ZP_01972468.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153821563|ref|ZP_01974230.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227082777|ref|YP_002811328.1| hypothetical protein VCM66_2581 [Vibrio cholerae M66-2]
 gi|229507290|ref|ZP_04396795.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286]
 gi|229509786|ref|ZP_04399267.1| lysine 2,3-aminomutase [Vibrio cholerae B33]
 gi|229516911|ref|ZP_04406357.1| lysine 2,3-aminomutase [Vibrio cholerae RC9]
 gi|229606796|ref|YP_002877444.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236]
 gi|254225400|ref|ZP_04919011.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|254851197|ref|ZP_05240547.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744377|ref|ZP_05418329.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101]
 gi|262158513|ref|ZP_06029628.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1]
 gi|262170093|ref|ZP_06037782.1| lysine 2,3-aminomutase [Vibrio cholerae RC27]
 gi|298500520|ref|ZP_07010324.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9657254|gb|AAF95802.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547247|gb|EAX57371.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121630089|gb|EAX62494.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|125622034|gb|EAZ50357.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|126509662|gb|EAZ72256.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520948|gb|EAZ78171.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146316532|gb|ABQ21071.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227010665|gb|ACP06877.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227014549|gb|ACP10759.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229345974|gb|EEO10946.1| lysine 2,3-aminomutase [Vibrio cholerae RC9]
 gi|229353260|gb|EEO18199.1| lysine 2,3-aminomutase [Vibrio cholerae B33]
 gi|229354795|gb|EEO19716.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286]
 gi|229369451|gb|ACQ59874.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236]
 gi|254846902|gb|EET25316.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255737902|gb|EET93295.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101]
 gi|262021501|gb|EEY40213.1| lysine 2,3-aminomutase [Vibrio cholerae RC27]
 gi|262029674|gb|EEY48323.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1]
 gi|297540689|gb|EFH76746.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 340

 Score =  174 bits (442), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 151/276 (54%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG        + +L YI +  Q+ EVIF+GGDPL+     +  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---GKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|170766549|ref|ZP_02901002.1| KamA family protein [Escherichia albertii TW07627]
 gi|170123987|gb|EDS92918.1| KamA family protein [Escherichia albertii TW07627]
 gi|315617559|gb|EFU98165.1| kamA family protein [Escherichia coli 3431]
          Length = 342

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E    P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEYIAAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWKVALEYVAAHPELDEIIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 ETIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|157156524|ref|YP_001465646.1| KamA family protein [Escherichia coli E24377A]
 gi|157163612|ref|YP_001460930.1| KamA family protein [Escherichia coli HS]
 gi|191165672|ref|ZP_03027512.1| KamA family protein [Escherichia coli B7A]
 gi|193065734|ref|ZP_03046798.1| KamA family protein [Escherichia coli E22]
 gi|194428975|ref|ZP_03061508.1| KamA family protein [Escherichia coli B171]
 gi|209921637|ref|YP_002295721.1| hypothetical protein ECSE_4446 [Escherichia coli SE11]
 gi|218556701|ref|YP_002389615.1| putative lysine aminomutase [Escherichia coli IAI1]
 gi|218697896|ref|YP_002405563.1| putative lysine aminomutase [Escherichia coli 55989]
 gi|256019792|ref|ZP_05433657.1| putative lysine aminomutase [Shigella sp. D9]
 gi|260846979|ref|YP_003224757.1| putative lysine aminomutase [Escherichia coli O103:H2 str. 12009]
 gi|260858300|ref|YP_003232191.1| putative lysine aminomutase [Escherichia coli O26:H11 str. 11368]
 gi|260870945|ref|YP_003237347.1| putative lysine aminomutase [Escherichia coli O111:H- str. 11128]
 gi|293476459|ref|ZP_06664867.1| kamA family protein yjeK [Escherichia coli B088]
 gi|300816554|ref|ZP_07096775.1| KamA family protein [Escherichia coli MS 107-1]
 gi|300821239|ref|ZP_07101387.1| KamA family protein [Escherichia coli MS 119-7]
 gi|300905975|ref|ZP_07123700.1| KamA family protein [Escherichia coli MS 84-1]
 gi|300922447|ref|ZP_07138566.1| KamA family protein [Escherichia coli MS 182-1]
 gi|301302564|ref|ZP_07208694.1| KamA family protein [Escherichia coli MS 124-1]
 gi|301325908|ref|ZP_07219331.1| KamA family protein [Escherichia coli MS 78-1]
 gi|307312017|ref|ZP_07591654.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W]
 gi|309796959|ref|ZP_07691359.1| KamA family protein [Escherichia coli MS 145-7]
 gi|331671054|ref|ZP_08371887.1| putative radical SAM domain protein [Escherichia coli TA271]
 gi|331680279|ref|ZP_08380938.1| putative radical SAM domain protein [Escherichia coli H591]
 gi|332280930|ref|ZP_08393343.1| KamA family protein [Shigella sp. D9]
 gi|157069292|gb|ABV08547.1| KamA family protein [Escherichia coli HS]
 gi|157078554|gb|ABV18262.1| KamA family protein [Escherichia coli E24377A]
 gi|190904367|gb|EDV64076.1| KamA family protein [Escherichia coli B7A]
 gi|192926603|gb|EDV81233.1| KamA family protein [Escherichia coli E22]
 gi|194413028|gb|EDX29317.1| KamA family protein [Escherichia coli B171]
 gi|209914896|dbj|BAG79970.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218354628|emb|CAV01600.1| putative lysine aminomutase [Escherichia coli 55989]
 gi|218363470|emb|CAR01124.1| putative lysine aminomutase [Escherichia coli IAI1]
 gi|257756949|dbj|BAI28451.1| predicted lysine aminomutase [Escherichia coli O26:H11 str. 11368]
 gi|257762126|dbj|BAI33623.1| predicted lysine aminomutase [Escherichia coli O103:H2 str. 12009]
 gi|257767301|dbj|BAI38796.1| predicted lysine aminomutase [Escherichia coli O111:H- str. 11128]
 gi|291320912|gb|EFE60354.1| kamA family protein yjeK [Escherichia coli B088]
 gi|300402209|gb|EFJ85747.1| KamA family protein [Escherichia coli MS 84-1]
 gi|300421205|gb|EFK04516.1| KamA family protein [Escherichia coli MS 182-1]
 gi|300526128|gb|EFK47197.1| KamA family protein [Escherichia coli MS 119-7]
 gi|300530784|gb|EFK51846.1| KamA family protein [Escherichia coli MS 107-1]
 gi|300842089|gb|EFK69849.1| KamA family protein [Escherichia coli MS 124-1]
 gi|300847324|gb|EFK75084.1| KamA family protein [Escherichia coli MS 78-1]
 gi|306907824|gb|EFN38325.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W]
 gi|308119372|gb|EFO56634.1| KamA family protein [Escherichia coli MS 145-7]
 gi|315063463|gb|ADT77790.1| predicted lysine aminomutase [Escherichia coli W]
 gi|315255490|gb|EFU35458.1| KamA family protein [Escherichia coli MS 85-1]
 gi|320200721|gb|EFW75307.1| Lysine 2,3-aminomutase [Escherichia coli EC4100B]
 gi|323156036|gb|EFZ42198.1| kamA family protein [Escherichia coli EPECa14]
 gi|323171580|gb|EFZ57226.1| kamA family protein [Escherichia coli LT-68]
 gi|323182253|gb|EFZ67663.1| kamA family protein [Escherichia coli 1357]
 gi|323946085|gb|EGB42121.1| KamA family protein [Escherichia coli H120]
 gi|324019385|gb|EGB88604.1| KamA family protein [Escherichia coli MS 117-3]
 gi|324118714|gb|EGC12606.1| KamA family protein [Escherichia coli E1167]
 gi|331061643|gb|EGI33569.1| putative radical SAM domain protein [Escherichia coli TA271]
 gi|331071742|gb|EGI43078.1| putative radical SAM domain protein [Escherichia coli H591]
 gi|332103282|gb|EGJ06628.1| KamA family protein [Shigella sp. D9]
 gi|333010296|gb|EGK29729.1| kamA family protein [Shigella flexneri VA-6]
          Length = 342

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  +      DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|262170406|ref|ZP_06038084.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451]
 gi|261891482|gb|EEY37468.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451]
          Length = 340

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 151/276 (54%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  + P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPYDPLLRQVLPLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 ATIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+N+  E    L  T  +  I PYYLH  D   G +HF ++ +E
Sbjct: 243 LRAVNVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++++A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQLMAGLIERVSGYLVPKLTREIGGKPSKTPLDLH 338


>gi|24115503|ref|NP_710013.1| hypothetical protein SF4302 [Shigella flexneri 2a str. 301]
 gi|24054828|gb|AAN45720.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
          Length = 342

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  +      DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|331681166|ref|ZP_08381803.1| putative radical SAM domain protein [Escherichia coli H299]
 gi|331081387|gb|EGI52548.1| putative radical SAM domain protein [Escherichia coli H299]
          Length = 342

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 151/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  +EE  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQEEYIVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++L
Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFAHSTLQILLVNHINHANEVDETFRQAMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
              G+  L+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E 
Sbjct: 244 RRVGVTQLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFVVSDDEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|323176095|gb|EFZ61687.1| kamA family protein [Escherichia coli 1180]
 gi|333011130|gb|EGK30544.1| kamA family protein [Shigella flexneri K-272]
          Length = 320

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  +      DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 45  NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 103

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 104 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 160

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 161 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 220

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 221 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 280

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 281 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 314


>gi|153213997|ref|ZP_01949190.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124115567|gb|EAY34387.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 340

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVI +GGDPL+     L  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+ND  +    L  T  +  I PYYLH  D   G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|153829470|ref|ZP_01982137.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148875053|gb|EDL73188.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 340

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPL+     +  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D +
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLY 338


>gi|71278705|ref|YP_267720.1| hypothetical protein CPS_0971 [Colwellia psychrerythraea 34H]
 gi|71144445|gb|AAZ24918.1| conserved hypothetical protein TIGR00238 [Colwellia psychrerythraea
           34H]
          Length = 342

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 150/271 (55%), Gaps = 3/271 (1%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ +Q +P   E  +      DP+ +++ +  +G++H+Y  R+L+ +   C + CR+C
Sbjct: 73  DDPLLKQVMPLSSEFLLSDGYTADPLNEHD-TVAEGLLHKYKSRVLMIVKTACAINCRYC 131

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR           + K  ++AL YI   ++I EVIF+GGDPL+ +   L  +++ +  I
Sbjct: 132 FRRHFPYQDNSP--NKKRWQSALDYIAAHNEISEVIFSGGDPLMANDDHLAWLIEQIEQI 189

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            HV  LR HSR+P+V P RI  +L+  LK +     + +H NHP E ++E I A+  L  
Sbjct: 190 PHVSRLRIHSRLPVVIPNRITAKLVTLLKCSRLKATMVLHINHPNEINQELIEALEPLRE 249

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           A I L +QSVLL+GINDD ++L NL     +  I+PYYLH  D   G +HF +   +   
Sbjct: 250 ARIPLFNQSVLLRGINDDAQVLINLSEALFDAGIQPYYLHLFDAVQGAAHFDIAEADAVA 309

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           IV ++   + G   P  + ++ G   K  I+
Sbjct: 310 IVKTMLASLPGFLMPKLVREIAGQANKTPIN 340


>gi|268323643|emb|CBH37231.1| conserved hypothetical protein [uncultured archaeon]
          Length = 366

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 163/287 (56%), Gaps = 10/287 (3%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           ++EI + + + +T    +L++ ++P+DPI +  +P +EELN++     D  G+  ++ + 
Sbjct: 31  LQEIIDRHPMRITRYYLSLLDENDPDDPIRKMAVPSEEELNLVGSY--DTSGERENTIMP 88

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           G+ H+Y    L+   + C +YCR+CFR+ +VG     ++   +   A  YI+E  +I  V
Sbjct: 89  GLQHKYAQTALILATNKCAMYCRYCFRKRLVGLPTKEIMHRFN--GAAKYIEEHEEINNV 146

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--- 204
           + +GGDP ILS   L + L+ L  I H+  +RF +RVP+  P RI  +            
Sbjct: 147 LISGGDPFILSTVVLSEFLERLSDILHLDFIRFGTRVPVTFPDRILKDDKLLTLLGNNSH 206

Query: 205 --KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
             + +Y+    NHP E + +A  A+SRL  AG+I+ +Q+VLLKG+NDDPE LA L    V
Sbjct: 207 ENRRIYVVTQFNHPREITAKATGAVSRLIRAGVIVDNQTVLLKGVNDDPETLAELQNKLV 266

Query: 263 ELRIKPYYLHHPD-LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
            + + PYYL     +    S+F++ + +G +IV + KE+++G  + F
Sbjct: 267 SIGVIPYYLFQCRPVKRVKSYFQVPLYKGYEIVEAAKERLNGHSKRF 313


>gi|197334541|ref|YP_002157135.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11]
 gi|197316031|gb|ACH65478.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11]
          Length = 340

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 153/277 (55%), Gaps = 7/277 (2%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           NP DP+ RQ +P  +E  +      DP+ + +N  P  G++H+Y +R+LL +   C V C
Sbjct: 67  NPFDPLLRQVLPLDQEFEVHEGYSNDPLEEQDNDQP--GLLHKYKNRVLLIVKGGCAVNC 124

Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           R+CFRR       KG   S    + ++ YI    +I EVIF+GGDPL+     LQ +++ 
Sbjct: 125 RYCFRRHFPYQDNKG---SKTVWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIEH 181

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
           +  I H++ LR HSR+P+V P RI   L Q  K+    + +  H NH  E ++  I+++ 
Sbjct: 182 IEAIPHIKRLRIHSRLPVVIPNRITDTLCQLFKKTRLQIILVTHINHANEINQTLISSMK 241

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
           +L  A + LL+QSVLLKG+ND+ + L  L     +  I PYYLH  D   G +HF ++ E
Sbjct: 242 KLKLAHVTLLNQSVLLKGVNDNTDTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDE 301

Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           + ++++  L E +SG   P    ++ G   K  +D +
Sbjct: 302 KAKQLMGELIENVSGYLVPTLAREIGGRKSKTPLDLY 338


>gi|229524637|ref|ZP_04414042.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426]
 gi|229338218|gb|EEO03235.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426]
          Length = 340

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPL+     +  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+A L E++SG   P    ++ G   K  +D
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLD 336


>gi|189200174|ref|XP_001936424.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187983523|gb|EDU49011.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 443

 Score =  174 bits (440), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/320 (32%), Positives = 172/320 (53%), Gaps = 22/320 (6%)

Query: 36  SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
           +I LTP + +L++   P +DPI +QF+P +    I+P+ +    D + + + SP+ G+VH
Sbjct: 31  AIRLTPHVLSLVDWTKPLDDPIRKQFLPLRS--GIIPDHKHLELDSLHEEDDSPVPGLVH 88

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL------SSKDTEAALAYIQEKSQIW 145
           RYP R L     +CPVYCRFC R   VG+   TV       S K  E    +I++   + 
Sbjct: 89  RYPGRALFLATSICPVYCRFCTRSYAVGANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQ 148

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI----NP------E 195
           +++ +GGD   L    +++++  L  I H++ +R  S+   V P RI    +P      E
Sbjct: 149 DIVVSGGDAYFLQPDHVKEIVYRLLNIPHIRRIRLASKGLAVAPGRILDDADPWTDALIE 208

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
           +    +E GK V +  H NH  E +     A ++L   G+I+ +QSVLLKG+N+  + L 
Sbjct: 209 VSNKGREMGKQVCLHTHINHANEITWITRLAANKLFKHGVIVRNQSVLLKGVNNHKDTLL 268

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
           +L++T  ++ I+PYY++  D+  G    R  ++E   +   L+ K+SG   P +++DLPG
Sbjct: 269 DLIKTLADMNIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKELRGKLSGFMMPSFVIDLPG 328

Query: 316 GYGKVKIDTHNIKKVGNGSY 335
           G GK  + T    + G  +Y
Sbjct: 329 GGGKRLVSTMESYQNGEATY 348


>gi|300724424|ref|YP_003713744.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061]
 gi|297630961|emb|CBJ91641.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061]
          Length = 342

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 149/274 (54%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P DP+  Q +  +EE  + P+   DP+ D   S + G++H+Y +R LL +   C V CR
Sbjct: 67  DPRDPLLLQVLTAREEFAVTPDFSTDPL-DEQRSVVPGLLHKYRNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +  + + AL YI +  +I E+IF+GGDPL+     L  ++  +
Sbjct: 126 YCFRRHFPYEDNKG---NKNNWQLALDYIGQHPEIDEIIFSGGDPLMAKDHELDWLISRI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I HV+ LR H+R+P+V P+RI   L   L ++   V +  H NH  E   E   +++R
Sbjct: 183 ESIPHVKRLRIHTRLPVVIPERITLALCNRLAQSHLQVIMVTHINHANEIDNEFRGSMTR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSV L+ IND+ E LA+L     +  I PYY+H  D   G +HF +  EE
Sbjct: 243 LKQAGVTLLNQSVFLRDINDNAETLADLSNVLFDTGILPYYIHVLDKVQGAAHFLVNDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + I+  L  K+SG   P    ++ G   K  +D
Sbjct: 303 AKIIMRELLSKVSGYLVPRLTREIGGEPSKTPLD 336


>gi|255318144|ref|ZP_05359387.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter
           radioresistens SK82]
 gi|262378563|ref|ZP_06071720.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164]
 gi|255304796|gb|EET83970.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter
           radioresistens SK82]
 gi|262299848|gb|EEY87760.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164]
          Length = 338

 Score =  174 bits (440), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 146/272 (53%), Gaps = 2/272 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P DP+  Q +P   EL   P    DP+G+   + L G++H+Y  R LL L   C V+CR
Sbjct: 63  DPLDPLLLQVLPHHLELEDFPGFVTDPLGEEAANLLPGVLHKYKTRFLLTLTGACAVHCR 122

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR      +  +  ++D  A   YI  + ++ E+I +GGDPL LS+++L   L+ L 
Sbjct: 123 YCFRRHF--PYQENLPKNEDWPAIKNYILSQPEVHEIILSGGDPLTLSNRKLGLWLERLE 180

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I  +  LR HSRVPIV P RI+ ELI  L+ +   + + +H+NH  E  +   + +  L
Sbjct: 181 SIPQIDTLRIHSRVPIVIPDRIDHELISLLENSRLRIILVVHSNHASELDDFTCSKLHEL 240

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
           A   + +L+Q+VLLKGIND  E+L NL     E R+ PYYLH  D   G  HF L   + 
Sbjct: 241 ARRQVTVLNQAVLLKGINDSAEVLINLSYRLFEARVMPYYLHVLDKVKGAHHFDLPSSKI 300

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            ++   +   + G   P  + ++ G   K  +
Sbjct: 301 DEVYKEVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|71898719|ref|ZP_00680888.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
 gi|71731484|gb|EAO33546.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
          Length = 342

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/267 (36%), Positives = 145/267 (54%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E + +     D +GD       GI+ +Y  RILL     C V+CR+C
Sbjct: 75  HDPLLRQVLPIDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYC 134

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    ++  T    +  E A A+++    I EVI +GGDPL LS  +L ++   LR  
Sbjct: 135 FRRHFPYAED-TASHDRWRETA-AFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGT 192

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+P+V P+RI+  L++ L     PV   IHANH  EF     AA++ L  
Sbjct: 193 PHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRG 252

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
            G  LL+Q+VLL+G+ND+   LA L        + PYYLH  D  AGT+H+ +     + 
Sbjct: 253 VGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARART 312

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           + A L  ++SG   P ++ ++PG   K
Sbjct: 313 LHAELVARLSGYLVPRFVREVPGDSSK 339


>gi|52840543|ref|YP_094342.1| L-lysine 2,3-aminomutase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52627654|gb|AAU26395.1| L-lysine 2,3-aminomutase, radical SAM domain protein [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 326

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/278 (36%), Positives = 150/278 (53%), Gaps = 3/278 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A  +   NP DP+  Q + +++EL+   +   DP+ ++N + +KG++H+Y  R+LL L 
Sbjct: 49  FAKRMQKGNPKDPLLLQVLAKEDELSEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLT 107

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            VC V CR+CFRR      +      +  +   AYI   S I EVI +GGDPL+ ++  L
Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDSSITEVILSGGDPLLAANLVL 165

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +++L++L  I H+  LR H+R+PIV P+RI+  L+  L        I +H NHP E  E 
Sbjct: 166 EELLQSLEEISHIHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDES 225

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
            + A S L  A   LL+QSVLL GINDD  IL+ L     +  I PYYLH  D   G++H
Sbjct: 226 VLRACSDLKKAACYLLNQSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAH 285

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           F + +   Q I   L+  + G   P    + PG   K 
Sbjct: 286 FDMPLLRAQSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323


>gi|289620587|emb|CBI52948.1| unnamed protein product [Sordaria macrospora]
          Length = 517

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/339 (31%), Positives = 179/339 (52%), Gaps = 29/339 (8%)

Query: 36  SIALTPVIANLINPHNPN-DPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
           +I +TP I + +N  +P  DPI RQF+P K  +  LP+  +   D + +   SP+KG+VH
Sbjct: 176 AIRMTPYILSRVNWQDPRHDPIVRQFLPMKSIM--LPDHPKLTLDSLHETADSPVKGLVH 233

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIW 145
           RY D+ L     VCP YC FC R   VG+   TV  +      +  E A AYI+ + ++ 
Sbjct: 234 RYTDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIESRPELQ 293

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-- 200
           +++ +GGD   L  ++L  + + L  + +++  RF S+   V P RI  E    +  L  
Sbjct: 294 DIVVSGGDAYYLQPEQLTLIGERLISMPNIKRFRFASKGLAVAPTRILDESDGWVNALID 353

Query: 201 -----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
                K+AGK + +  H N+P E S  +  A  +L   G+++ +Q+VLL+G+NDD E ++
Sbjct: 354 ISNKAKKAGKSMALHTHFNNPNEISWVSSDATQKLFENGVMVRNQTVLLRGVNDDYETMS 413

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            L+R   +  I PYY++  D+     H R  ++    + A ++  I+G   P +++DLPG
Sbjct: 414 TLIRQLADNNITPYYVYQCDMVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPG 473

Query: 316 GYGKVKIDTHN--IKKVGNGSY---CIT--DHHNIVHDY 347
           G GK    +H    +K G  ++    +T  D  N V++Y
Sbjct: 474 GGGKRLACSHQNYDRKTGVSTFMAPAVTSRDKANKVYEY 512


>gi|170021843|ref|YP_001726797.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC
           8739]
 gi|169756771|gb|ACA79470.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC
           8739]
          Length = 342

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 150/274 (54%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +  ++E  +      DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPEDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|262166674|ref|ZP_06034411.1| lysine 2,3-aminomutase [Vibrio mimicus VM223]
 gi|262026390|gb|EEY45058.1| lysine 2,3-aminomutase [Vibrio mimicus VM223]
          Length = 340

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  + P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPYDPLLRQVLPLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 ATIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+N+  E    L  T  +  I PYYLH  D   G +HF ++  E
Sbjct: 243 LRAVNVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDAE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++++A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQLMAGLIERVSGYLVPKLTREIGGKPSKTPLDLH 338


>gi|54296337|ref|YP_122706.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris]
 gi|53750122|emb|CAH11514.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris]
          Length = 326

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/278 (36%), Positives = 149/278 (53%), Gaps = 3/278 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A  +   NP DP+  Q + +++EL    +   DP+ ++N + +KG++H+Y  R+LL L 
Sbjct: 49  FAKRMQKGNPKDPLLLQVLAKEDELTEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLT 107

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            VC V CR+CFRR      +      +  +   AYI     I EVI +GGDPL+ ++  L
Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVL 165

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +++L++L  I H+  LR H+R+PIV P+RI+  L+  L        I +H NHP E  E 
Sbjct: 166 EELLQSLEEISHIHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDES 225

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
            + A S L  A   LL+QSVLL GINDD  IL+ L  T  +  I PYYLH  D   G++H
Sbjct: 226 VLRACSDLKKAACYLLNQSVLLAGINDDAGILSKLSHTLFDYGIMPYYLHLLDKVKGSAH 285

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           F + +   Q I   L+  + G   P    + PG   K 
Sbjct: 286 FDMPLPRAQSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323


>gi|239618040|ref|YP_002941362.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
           19.5.1]
 gi|239506871|gb|ACR80358.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
           19.5.1]
          Length = 366

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 159/292 (54%), Gaps = 9/292 (3%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           + K + +++K+++  +         NLI   +PNDPI R  IP  +EL  +     D   
Sbjct: 16  LDKTEKEKLKKVTEKFVFRTNEYYLNLIKWDDPNDPIKRIIIPSMDEL--IEWGELDASN 73

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           ++ ++   G+ H+Y D  L+ +  VC   CRFCFR+ +  +    ++   D E  L YI+
Sbjct: 74  EHKYTVAPGLEHKYKDTALMLVSRVCGGICRFCFRKRVFLAGNREIMI--DVEPGLEYIK 131

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
           +  +I  V+ +GGDPL+LS  +L+ ++  LR I HVQI+R  +++   +P RI  +P+LI
Sbjct: 132 KHKEITNVLLSGGDPLMLSTSKLENIISRLRKIDHVQIIRIGTKMVAFNPYRIIDDPKLI 191

Query: 198 QCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           + LK+   P   +YI    NHP E ++ AI AI+ L  AG  L +Q+ L++GIND PE L
Sbjct: 192 ELLKKYSTPKKRIYIMTQFNHPREITDVAIEAINLLKEAGTELANQTPLIRGINDSPETL 251

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           A L R    + + PYY+       G   + + IEEG +I       +SGL +
Sbjct: 252 AELFRKLSFIGVPPYYVFQCRPTKGNKAYSVPIEEGYEIFRKATAMVSGLAK 303


>gi|224370018|ref|YP_002604182.1| YodO [Desulfobacterium autotrophicum HRM2]
 gi|223692735|gb|ACN16018.1| YodO [Desulfobacterium autotrophicum HRM2]
          Length = 359

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 162/302 (53%), Gaps = 24/302 (7%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           E++  I  +   +    TP  A L++P +P  P+ RQ IP  +EL       E+  G  N
Sbjct: 27  EELKAINTLDTRW--GTTPYFAALMDPDDPCCPVRRQIIPSLKEL-------ENTYGIKN 77

Query: 83  HSPL-----------KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
           +                I  +Y DR+   +   C  YCR CFRRE+V  Q+  +    D 
Sbjct: 78  YLMFHENRTVDPERPDCIARQYQDRVAFTVTDTCASYCRHCFRREVVVDQRLKL--RFDL 135

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
           +  + +I++  +I +V+ TGGDP +LS + L  ++  LR I HV+++RF +R  I  PQR
Sbjct: 136 DQGIKWIKKNKEIKDVLVTGGDPFLLSDQLLGDLITQLRQIDHVRMIRFGTRTIINLPQR 195

Query: 192 INPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           I  +L++ L +  + P++I    NHP E +++   A+  L   G+ + +Q+VLLKGINDD
Sbjct: 196 ITQDLMEILGDFHRVPIWINTQCNHPKEITDKTARAVFDLLRCGVNVGNQAVLLKGINDD 255

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKISGLCQPFY 309
            +    L +  V  RI+PYYL + + A G  HFR  +E+G +++   L+   +GL +P Y
Sbjct: 256 VDTFRELHQKLVYTRIRPYYLFYCEAAPGIDHFRTGVEKGSQLIRDGLQGHTTGLARPTY 315

Query: 310 IL 311
           ++
Sbjct: 316 VI 317


>gi|37527976|ref|NP_931321.1| hypothetical protein plu4131 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787412|emb|CAE16503.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 342

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 148/274 (54%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +PNDP+  Q I   EE  + P    DP+ D   S + G++H+Y +R LL +   C + CR
Sbjct: 67  DPNDPLLLQVITTPEEFTLTPGFSTDPL-DEQRSAVPGLLHKYRNRALLLVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   + ++ + AL YIQ+  ++ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYEDNKG---NKRNWQQALDYIQQHPELDEIIFSGGDPLMAKDHELDWLISNL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR H+R+P+V P RI   L   L ++   V +  H NH  E  +    ++  
Sbjct: 183 EKISHIKRLRIHTRLPVVIPARITTTLCDRLAQSRLQVIMVTHINHANEIDQSLRNSMIL 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AGI LL+QSVLL+GIN+  + LA+L     +  I PYY+H  D   G +HF +  EE
Sbjct: 243 LKQAGITLLNQSVLLRGINNHSDTLADLSNALFDAGILPYYIHVLDKVQGAAHFMVNDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + ++  L  KISG   P    ++ G   K  +D
Sbjct: 303 AKGLIRELLTKISGYLVPRLAREIGGEPSKTPLD 336


>gi|148358501|ref|YP_001249708.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby]
 gi|296105850|ref|YP_003617550.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy]
 gi|148280274|gb|ABQ54362.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby]
 gi|295647751|gb|ADG23598.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy]
          Length = 326

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 149/278 (53%), Gaps = 3/278 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A  +   NP DP+  Q + +++EL +  +   DP+ ++N + +KG++H+Y  R+LL L 
Sbjct: 49  FAERMQKGNPKDPLLLQVLAKEDELTVADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLT 107

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            VC V CR+CFRR      +      +  +   AYI     I EVI +GGDPL+ ++  L
Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVL 165

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +++L++L  I HV  LR H+R+PIV P+RI+  L+  L        I +H NHP E  E 
Sbjct: 166 EELLQSLEEISHVHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDES 225

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
            + A S L  A   LL+QSVLL G+NDD  IL+ L     +  I PYYLH  D   G++H
Sbjct: 226 VLRACSDLKKATCYLLNQSVLLAGVNDDAVILSKLSHALFDYGIMPYYLHLLDKVKGSAH 285

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           F + +   Q I   L+  + G   P    + PG   K 
Sbjct: 286 FDMPLPRAQSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323


>gi|110808069|ref|YP_691589.1| hypothetical protein SFV_4304 [Shigella flexneri 5 str. 8401]
 gi|110617617|gb|ABF06284.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
          Length = 342

 Score =  173 bits (438), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 150/274 (54%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  +      DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PI  P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIAIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+G+ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|261211227|ref|ZP_05925516.1| lysine 2,3-aminomutase [Vibrio sp. RC341]
 gi|260839728|gb|EEX66339.1| lysine 2,3-aminomutase [Vibrio sp. RC341]
          Length = 340

 Score =  173 bits (438), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  + P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPYDPLLRQVLPLNAEFEVHPGYSNDPLDEQNNA-IPGLLHKYKNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    + +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+ND       L  T  +  I PYYLH  D   G +HF ++ ++
Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVAAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|260770856|ref|ZP_05879785.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972]
 gi|260614093|gb|EEX39283.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972]
          Length = 340

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 149/276 (53%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  EE ++ P   EDP+ + N++ + G++H+Y +R L+ +   C + CR
Sbjct: 67  NPYDPLLRQVLPLSEEFDVHPGYSEDPLDEQNNA-VPGLLHKYRNRALMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI  + ++ E+I +GGDPL+   + L  +++ +
Sbjct: 126 YCFRRHFPYADNKG---SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I HV+ LR HSR+P+V P R+  EL+  L      V +  H NH  E +      ++R
Sbjct: 183 GAISHVKRLRIHSRLPVVIPARVTDELVALLANTRLQVVLVTHINHANEINLALKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q V+LKG+ND       L  T  +  I PYY+H  D   G +HF ++  E
Sbjct: 243 LRAVNVTLLNQGVMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            + I++ L E++SG   P    ++ G   K  +D H
Sbjct: 303 AKAIMSGLLERVSGYLVPTLTREIGGRKSKTPLDLH 338


>gi|325921161|ref|ZP_08183030.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865]
 gi|325548355|gb|EGD19340.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865]
          Length = 342

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 142/267 (53%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E+ ++P    D +GD       G++ +Y  R LL     C V+CR+C
Sbjct: 75  HDPLLRQVLPLDAEMRLVPGFGLDAVGDGAAKIADGVIQKYRGRALLIATGSCAVHCRYC 134

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    +++    +      A+A I     I EV+ +GGDPL L+  +L ++   L  I
Sbjct: 135 FRRHFPYAEETA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATSKLAELTDALAAI 192

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+P+V P+R++  L+  L+    PV   IHANH  EF     AA+  + +
Sbjct: 193 GHIKRLRIHSRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFDSTVDAAMRAMRD 252

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
            G  LL+Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF +     + 
Sbjct: 253 TGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDAHARA 312

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           +   L  ++SG   P  + ++PG  GK
Sbjct: 313 LHTELATRLSGYLVPRLVREIPGDTGK 339


>gi|221133998|ref|ZP_03560303.1| lysine 2;3-aminomutase [Glaciecola sp. HTCC2999]
          Length = 351

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 93/293 (31%), Positives = 156/293 (53%), Gaps = 6/293 (2%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP----IGDNNHSPLKGIV 90
           +++ +     +L+  ++ +DP+ +Q +P  +E  + PE   DP    + +  ++  KG++
Sbjct: 55  FALRVPRFFVDLMARNDLDDPLLKQVMPVADEFIVDPEFSLDPLKEQVNETTNTSTKGML 114

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y +R+LL L   C V CR+CFRR     Q     + +D      +I+   +I EVI +
Sbjct: 115 HKYQNRVLLMLRGGCAVNCRYCFRRHFPYDQHHN--NKQDWLDVFEHIKTDPKIDEVILS 172

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+ +   +  +   L  I  ++ +R H+R+P+V P R+ PEL+  L ++ K   + 
Sbjct: 173 GGDPLMANDDYMAWICAQLETIPSIKRIRLHTRLPVVLPYRVTPELLIALAQSSKQTIMV 232

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H NHP E S E I  ++ L  AG+ +L+Q+VLLKGIND       L       RI+PYY
Sbjct: 233 LHINHPKEISSELIQKVALLHEAGVTVLNQAVLLKGINDSAHTQIALNEALFSARIQPYY 292

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           LH  D   G +HF ++ +    I+  +  K SG   P  + ++ G   K  +D
Sbjct: 293 LHMFDKVQGAAHFAISDKRAVNIMREVLTKQSGYMVPKLVREIGGESSKTPVD 345


>gi|251788023|ref|YP_003002744.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591]
 gi|247536644|gb|ACT05265.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591]
          Length = 345

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/301 (33%), Positives = 157/301 (52%), Gaps = 5/301 (1%)

Query: 24  QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
           Q+   +E    + + +    A  + P +  DP+  Q +  ++E    P    DP+ D  H
Sbjct: 40  QLTAGREARRLFPLRVPRAFAARMRPGDARDPLLLQVLTAQDEFIATPGFSHDPL-DEQH 98

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKS 142
           S + G++H+Y +R LL +   C V CR+CFRR       +G   +  +   AL YI++  
Sbjct: 99  SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHP 155

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           Q+ E+IF+GGDPL+     L  +L  L  I H++ LR H+R+P+V P RI  EL + L +
Sbjct: 156 QLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLRIHTRLPVVIPARITAELCRRLAQ 215

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           +   V +  H NH  E   E    ++RL  AG+ LL+QSVLL+G+ND+   LA L     
Sbjct: 216 SPLRVVLVTHINHANEIDTELADGMARLRQAGVTLLNQSVLLRGVNDNANTLAALSNALF 275

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           +  I PYYLH  D   G +HF +  ++ + +V  L  ++SG   P    ++ G   K  +
Sbjct: 276 DAGILPYYLHVLDKVQGAAHFLVPDDDARTLVRELMMQVSGYLVPSLAREIGGEASKTLL 335

Query: 323 D 323
           D
Sbjct: 336 D 336


>gi|54293293|ref|YP_125708.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens]
 gi|53753125|emb|CAH14572.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens]
          Length = 326

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/278 (36%), Positives = 148/278 (53%), Gaps = 3/278 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A  +   NP DP+  Q + +++EL    +   DP+ +NN + +KG++H+Y  R+LL L 
Sbjct: 49  FAKRMQKGNPKDPLLLQVLAKEDELTEADDYVIDPLSENN-TLIKGLLHKYRGRVLLTLT 107

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            VC V CR+CFRR      +      +  +   AYI     I EVI +GGDPL+ ++  L
Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVL 165

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +++L++L  I H+  LR H+R+PIV P+RI+  L+  L        I IH NHP E  E 
Sbjct: 166 EELLQSLEEISHIHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDES 225

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
            + A S L  A   LL+QSVLL GINDD  IL+ L     +  I PYYLH  D   G++H
Sbjct: 226 VLRACSDLKKAACYLLNQSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAH 285

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           F + +   + I   L+  + G   P    + PG   K 
Sbjct: 286 FDMPLPRARSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323


>gi|262401937|ref|ZP_06078502.1| lysine 2,3-aminomutase [Vibrio sp. RC586]
 gi|262351909|gb|EEZ01040.1| lysine 2,3-aminomutase [Vibrio sp. RC586]
          Length = 340

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E  + P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPYDPLLRQVLPLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPLI     L  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLIAKDHELAWLIERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    + +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+N+  E    L  T  +  I PYYLH  D   G +HF ++ +E
Sbjct: 243 LRAVNVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++++  L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQLMGGLIERVSGYLVPKLTREIGGKPSKTPLDLH 338


>gi|291615956|ref|YP_003518698.1| YjeK [Pantoea ananatis LMG 20103]
 gi|291150986|gb|ADD75570.1| YjeK [Pantoea ananatis LMG 20103]
          Length = 342

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/274 (36%), Positives = 148/274 (54%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +  DP+  Q +  ++E    P    DP+ + N S + G++H+Y +R LL +   C V CR
Sbjct: 67  DAQDPLLLQVLTSRQEFVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ +AAL YI    ++ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYQDNQG---NKRNWQAALDYITAHPELDEIIFSGGDPLMAKDHELAWLIDAL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI   L Q L E    V +  H NH  E  E    A+ R
Sbjct: 183 GAIPHLKRLRIHSRLPVVIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  A + LL+QSVLL+G+NDD + LA L     +  I PYYLH  D   G +HF ++ EE
Sbjct: 243 LKRADVTLLNQSVLLRGVNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + ++ SL  ++SG   P    ++ G   K  +D
Sbjct: 303 ARALMRSLLPRVSGYLVPKLAREIGGEPSKTPLD 336


>gi|260772045|ref|ZP_05880962.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14]
 gi|260612912|gb|EEX38114.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14]
          Length = 340

 Score =  172 bits (437), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/276 (36%), Positives = 148/276 (53%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +P  +E  I P    DP+ + N+S   G++H+Y +R LL +   C + CR
Sbjct: 67  NPHDPLLRQVLPLSDEFIIHPGYSTDPLEEQNNS-TPGLLHKYRNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG  L  + +   L YI +  Q+ EVI +GGDPL+     L  +++ +
Sbjct: 126 YCFRRHFPYQDNKGNKLVWQQS---LDYIAQHRQLNEVILSGGDPLMAKDHELGWLIEQI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL+    E    V +  H NH  E + E    ++R
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVSLCAETRLQVILVTHINHANEINAELSQQLAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+QSVLLKG+ND       L     +  I PYYLH  D   G +HF ++ E+
Sbjct: 243 LRAEKVTLLNQSVLLKGVNDSVPAQVALSEALFDAGILPYYLHVLDKVQGAAHFYVSDEQ 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            + I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARTIIAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|327396208|dbj|BAK13630.1| lysine 2 3-aminomutase YjeK [Pantoea ananatis AJ13355]
          Length = 342

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/274 (36%), Positives = 148/274 (54%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +  DP+  Q +  ++E    P    DP+ + N S + G++H+Y +R LL +   C V CR
Sbjct: 67  DAQDPLLLQVLTSRQEFVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ +AAL YI    ++ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYQDNQG---NKRNWQAALDYIAAHPELDEIIFSGGDPLMAKDHELAWLIDAL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI   L Q L E    V +  H NH  E  E    A+ R
Sbjct: 183 GAIPHLKRLRIHSRLPVVIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  A + LL+QSVLL+G+NDD + LA L     +  I PYYLH  D   G +HF ++ EE
Sbjct: 243 LKRADVTLLNQSVLLRGVNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + ++ SL  ++SG   P    ++ G   K  +D
Sbjct: 303 ARALMRSLLPRVSGYLVPKLAREIGGEPSKTPLD 336


>gi|294664930|ref|ZP_06730245.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292605300|gb|EFF48636.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 342

 Score =  172 bits (436), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 144/269 (53%), Gaps = 6/269 (2%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E+   P    D +GD       G++ +Y  R LL     C V+CR+C
Sbjct: 75  HDPLLRQVLPLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYC 134

Query: 113 FRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           FRR      +  T    +D   A+A I     I EV+ +GGDPL L+  +L ++   L  
Sbjct: 135 FRRHFPYAEETATRDGWRD---AVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAA 191

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
           + H++ LR HSR+PIV P+R++  L+  L+    PV   +HANH  EF     AA   L 
Sbjct: 192 VPHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLR 251

Query: 232 NAGIILLSQSVLLKGINDDPEILANLM-RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            AG  LL+Q+VLL+G+ND  + LA L  R+FV   + PYYLH  D  AG +HF +     
Sbjct: 252 EAGAQLLNQAVLLRGVNDSVDALAALSERSFVA-GVLPYYLHQLDRVAGVAHFEVDDARA 310

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319
           + + A L  ++SG   P  + ++PG  GK
Sbjct: 311 RALHAELAARLSGYLVPRLVREIPGDTGK 339


>gi|307609109|emb|CBW98551.1| hypothetical protein LPW_03791 [Legionella pneumophila 130b]
          Length = 326

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/278 (36%), Positives = 148/278 (53%), Gaps = 3/278 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A  +   NP DP+  Q + +++EL    +   DP+ ++N + +KG++H+Y  R+LL L 
Sbjct: 49  FAKRMQKGNPKDPLLLQVLAKEDELTEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLT 107

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            VC V CR+CFRR      +      +  +   AYI     I EVI +GGDPL+ ++  L
Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVL 165

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +++L++L  I H+  LR H+R+PIV P+RI+  L+  L        I IH NHP E  E 
Sbjct: 166 EELLQSLEEISHIHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDES 225

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
            + A S L  A   LL+QSVLL GINDD  IL+ L     +  I PYYLH  D   G++H
Sbjct: 226 VLQACSDLKKAACYLLNQSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAH 285

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           F + +   Q I   L+  + G   P    + PG   K 
Sbjct: 286 FDMPLPRAQSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323


>gi|315178899|gb|ADT85813.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218]
          Length = 340

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 149/276 (53%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  EE ++ P   EDP+ + N++ + G++H+Y +R L+ +   C + CR
Sbjct: 67  NPYDPLLRQVLPLSEEFDVHPGYSEDPLDEQNNA-VPGLLHKYRNRALMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI  + ++ E+I +GGDPL+   + L  +++ +
Sbjct: 126 YCFRRHFPYADNKG---SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P R+  EL+  L      V +  H NH  E +      ++R
Sbjct: 183 GAISHIKRLRIHSRLPVVIPARVTDELVALLANTHLQVVLVTHINHANEINLALKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q V+LKG+ND       L  T  +  I PYY+H  D   G +HF ++  E
Sbjct: 243 LRAVNVTLLNQGVMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            + I++ L E++SG   P    ++ G   K  +D H
Sbjct: 303 AKAIMSGLLERVSGYLVPTLTREIGGRKSKTPLDLH 338


>gi|238898952|ref|YP_002924634.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229466712|gb|ACQ68486.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 345

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 159/302 (52%), Gaps = 10/302 (3%)

Query: 28  IKEISNHYSIALTPV-----IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           IK     Y+ AL P+      A  + P +P DP+  Q +   +E         DP+ +  
Sbjct: 39  IKLRQGAYARALFPLRVPIAFAEKMTPGDPKDPLLLQVLTLSDEFVHTSGFSADPLCEQA 98

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEK 141
            + L G++H+Y +R+L+ +   C V+CR+CFRR     + KG   S  + E    YI++ 
Sbjct: 99  -AVLPGLLHKYRNRVLMLIKGGCAVHCRYCFRRHFPYQNNKG---SQVNREQVFNYIRKH 154

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
           +++ EVIF+GGDPL+     L  ++  L  I H++ LR H+R+PIV P RI   L +   
Sbjct: 155 TELDEVIFSGGDPLMAKDPELASLITVLESIPHIKRLRIHTRLPIVIPSRITTRLCESFS 214

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
            +   + +  H NHP E  +    ++ RL  AG+ LL+Q+VLLK +N++ EILA L    
Sbjct: 215 NSSLQILMVTHINHPNEMDQAVYNSMYRLKQAGVTLLNQTVLLKDVNNNAEILAQLSNRL 274

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
               I PYYLH  D   G +HF +   E ++I+ +L  ++SG   P    ++ G   K+ 
Sbjct: 275 FNAGILPYYLHLLDKVQGAAHFMVEEHEARQIMKALLGQVSGYLVPRLTREVAGQPSKIP 334

Query: 322 ID 323
           ID
Sbjct: 335 ID 336


>gi|149192243|ref|ZP_01870457.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1]
 gi|148833916|gb|EDL50939.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1]
          Length = 340

 Score =  172 bits (436), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 148/276 (53%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  +E  +     EDP+ + + + + G++H+Y +R LL +   C V CR
Sbjct: 67  NPYDPLLRQVLPLSQEFEVHNGYSEDPLEEQD-AAVPGLLHKYHNRALLIVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG      + + AL YI    +I E+I +GGDPL+     L  +++  
Sbjct: 126 YCFRRHFPYEDNKG---GKANWQVALDYIAAHPEIDEIILSGGDPLMAKDSELAWLVQKA 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P+RI  EL Q LK+      +  H NH  E + E  A+++R
Sbjct: 183 ESIHHLKTLRIHSRLPVVIPKRITEELCQLLKQTRLNTILVTHINHANEVNSEFSASMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           + N G  LL+Q VLLKG+ND  +    L      + I PYYLH  D   G +HF ++ ++
Sbjct: 243 IKNTGTTLLNQGVLLKGVNDSVDAQFELSHALFSVGILPYYLHVLDKVQGAAHFFISDDD 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            + I+  L +++SG   P    +  G   K  +D H
Sbjct: 303 AKAIIQGLIKRVSGYLVPKLTREEGGRASKTPLDLH 338


>gi|304396296|ref|ZP_07378177.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB]
 gi|304355805|gb|EFM20171.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB]
          Length = 327

 Score =  172 bits (436), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 151/273 (55%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           + +DP+  Q + +++E    P    DP+ D   + + G++H+Y +R LL +   C V CR
Sbjct: 52  DAHDPLLLQVLTRRQEFIDAPGYSTDPL-DEQSNVVPGLLHKYRNRALLLVKGGCAVNCR 110

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR      +    + +  +AAL YI E  ++ E+IF+GGDPL+     L  ++  L 
Sbjct: 111 YCFRRHF--PYQDNPGNKRSWQAALDYIAEHPELDEIIFSGGDPLMAKDHELAWLIAALE 168

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+P+V P RI  +L Q L +    V +  H NH  E  E    ++ RL
Sbjct: 169 QIPHLKRLRIHSRLPVVIPARITEQLCQMLSDTRLQVIMVTHINHAQEIDEALRESMIRL 228

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+QSVLL+GIND+ + LA L     +  I PYYLH  D   G +HF ++ +E 
Sbjct: 229 KRAGVTLLNQSVLLRGINDNAQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDDEA 288

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +++V SL  ++SG   P    ++ G   K  +D
Sbjct: 289 RQLVRSLLSQVSGYLVPKLAREIGGEPSKTPLD 321


>gi|90581266|ref|ZP_01237063.1| hypothetical protein VAS14_18921 [Vibrio angustum S14]
 gi|90437505|gb|EAS62699.1| hypothetical protein VAS14_18921 [Vibrio angustum S14]
          Length = 340

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 148/274 (54%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +P ++E  +      DP+ +   + + G++H+Y +R+LL +   C V CR
Sbjct: 67  NPHDPLLRQILPLEQEFEVHQGYSVDPL-EEQQNDIPGLLHKYHNRVLLIVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +    + +LAYI    +I EVI +GGDPL+     LQ +++ +
Sbjct: 126 YCFRRHFPYSDNKG---NKHQWQQSLAYIAAHPEINEVILSGGDPLMAKDHELQWLVEHI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI   L Q L E      +  H NH  E  +    A+ +
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMQK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  A + LL+Q VLLKGIND  + L +L     +  I+PYYLH  D   G +H+ +  E 
Sbjct: 243 LKQANVTLLNQGVLLKGINDSVKTLTDLSEALFDAGIQPYYLHVLDRVQGAAHYMVDDET 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++++A L  ++SG   P    ++ G   K  +D
Sbjct: 303 ARQLMAGLITQVSGYLVPKLTREIGGRASKTPLD 336


>gi|307298212|ref|ZP_07578016.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916298|gb|EFN46681.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 364

 Score =  172 bits (435), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 99/304 (32%), Positives = 168/304 (55%), Gaps = 12/304 (3%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           LTS + +   N    EQI E+K++++ Y          LIN ++P+DPI R  +P  EEL
Sbjct: 7   LTSVEKIEELN---DEQITEMKKVTDVYPFRANDYYLGLINWNDPHDPIKRIILPDFEEL 63

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +   +   D   ++ ++   G+ H+Y D  LL +  VC  +CRFCFR+ +  ++   V++
Sbjct: 64  DEWGDL--DASQEHIYTVAPGMEHKYKDTALLLVSKVCGSFCRFCFRKRLFSTENKEVVN 121

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             D    + YI++  +I  V+ TGGD LILS ++L  +++ LR I HV I+RF S++   
Sbjct: 122 --DVTLGVEYIRKHKEITNVLLTGGDSLILSTEKLGDIVRQLREIDHVGIIRFGSKMVAF 179

Query: 188 DPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           +P RI  +P+L   +K+   P   +YI  H NHP E ++EAI  ++ L +AG ++ +Q+ 
Sbjct: 180 NPYRIINDPDLPDMVKKYSTPKKRIYIMAHFNHPRELTDEAIRGLNILRDAGAVICNQTP 239

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           +++G+ND  E++  L R    + I PYY+       G   + +  E G +I     + +S
Sbjct: 240 MIRGVNDSVEVMTELFRKLSFIGIPPYYVFQCRPTKGNHTYAVPAENGYEIFKKSIDSVS 299

Query: 303 GLCQ 306
           GL +
Sbjct: 300 GLAK 303


>gi|50085317|ref|YP_046827.1| putative aminomutase [Acinetobacter sp. ADP1]
 gi|49531293|emb|CAG69005.1| conserved hypothetical protein; putative aminomutase [Acinetobacter
           sp. ADP1]
          Length = 338

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 149/273 (54%), Gaps = 5/273 (1%)

Query: 32  SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
           S+ + + +     N +   +P DP+  Q +P   EL   PE   DP+G+   + L G++H
Sbjct: 44  SDTFKLRVPRAFVNKMQKADPFDPLLLQVLPHHLELEDHPEFVTDPLGEEEANQLPGVLH 103

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           +Y  R LL L   C V+CR+CFRR      +  +  + D      YIQ+   I EVI +G
Sbjct: 104 KYQSRFLLTLTGACAVHCRYCFRRHF--PYQENLPKNNDWPQIQNYIQQHPLINEVILSG 161

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           GDPL L++ +L+  ++ L  +  V+ILR HSRVPIV P RI+ EL+  L+ +   + + +
Sbjct: 162 GDPLTLTNHKLKIWIERLESLPQVKILRIHSRVPIVIPNRIDEELLSLLENSRLRIIMVV 221

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
           H+NH  E  +     + +L+   + + +Q+VLLKG+ND  + L  L +   + R+ PYYL
Sbjct: 222 HSNHAAELDDFTCNQLHKLSLRNVTVFNQAVLLKGVNDSAQTLIELSQRLFDARVMPYYL 281

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           H  D   G  HF L   E  K+ +  KE ++GL
Sbjct: 282 HVLDKVKGAQHFDL---ESSKVDSLYKEVLAGL 311


>gi|294650801|ref|ZP_06728149.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823316|gb|EFF82171.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194]
          Length = 338

 Score =  172 bits (435), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 147/272 (54%), Gaps = 2/272 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P DP+  Q +P   EL   PE   DP+G+   + + G++H+Y  R LL L   C ++CR
Sbjct: 63  DPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQMAGVLHKYQSRFLLTLTGACAIHCR 122

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR      +  +  + D E    YI++   I EVI +GGDPL L+++++   L+ L 
Sbjct: 123 YCFRRHF--PYQENLPKNDDWENIKHYIEQNPLINEVILSGGDPLTLNNRKISLWLERLA 180

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            +  ++ILR HSRVPIV P R++ ELI  LK +   + + +H+NH  E  +   + + +L
Sbjct: 181 SLPQIKILRIHSRVPIVIPNRVDEELISILKNSRLRIIVVVHSNHAAELDDFTCSKLLQL 240

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
           +   I +L+Q+VLLKG+ND  + L  L     + R+ PYYLH  D   G  HF L   E 
Sbjct: 241 SLHHITVLNQAVLLKGVNDSAKTLTELSNRLFDARVMPYYLHVLDKVKGAQHFDLRSSEI 300

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             I + +   + G   P  + ++ G   K  +
Sbjct: 301 DHIYSDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|261254094|ref|ZP_05946667.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891]
 gi|260937485|gb|EEX93474.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891]
          Length = 340

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 150/275 (54%), Gaps = 3/275 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  EE  I      DP+ + N+S + G++H+Y +R L+ +   C + CR
Sbjct: 67  NPFDPLLRQVLPLSEEFEIHEGYSNDPLEEQNNS-IPGLLHKYHNRALMIVKGGCAINCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     +  +  S    + +L YIQ+  +I EVI +GGDPL+   + L  ++  + 
Sbjct: 126 YCFRRHFPYDENKS--SKSVWQQSLDYIQQHPEIDEVILSGGDPLMAKDEELNWLVNHIA 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+P+V P RI P L   L+       +  H NH  E  +E   +++ L
Sbjct: 184 DIPHIKRLRIHSRLPVVIPARITPALANLLENTRLQTILVTHINHAQEIHQELRDSLTTL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+Q V+LKG+ND  +    L +   +  + PYY+H  D   G +HF ++ ++ 
Sbjct: 244 KRAGVTLLNQGVMLKGVNDSIDDQVTLSQALFDAGVLPYYMHVLDKVQGAAHFFISDQQA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           + I+A + EK+SG   P    ++ G   K  +D H
Sbjct: 304 KIIMAGVMEKVSGYLVPKLTREIGGRASKTPLDLH 338


>gi|46445864|ref|YP_007229.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46399505|emb|CAF22954.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 347

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/289 (34%), Positives = 153/289 (52%), Gaps = 7/289 (2%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           ++I +   +A  +   +  DP+ +QF+P K E        +DP+GD        ++H+Y 
Sbjct: 61  FAINVPYRLAQKMTKGSLEDPLVKQFLPFKSEFENHNLFVQDPVGDEQCRRTAQLLHKYR 120

Query: 95  DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
            R+LL     C ++CR+CFR+     S   T L   D       I++ S I EVI +GGD
Sbjct: 121 GRVLLVCTSACAMHCRYCFRQNFSYQSHDKTFLKELDL------IRQDSSIHEVILSGGD 174

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL LS+  L K+ + L  I H++ +RFH+R PI  P+RI+   +  ++   K ++  IH 
Sbjct: 175 PLSLSNDILAKLFEELNGISHLKRIRFHTRFPIGIPERIDKGFLNIIENCPKQIFFVIHC 234

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E  E+    +  L   G +LL+QSVLLKG+ND  E+L  L     +  I PYYLH 
Sbjct: 235 NHPLELDEDIFERLKALHLRGCVLLNQSVLLKGVNDRIEVLEELCELLSDHGIIPYYLHQ 294

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            D   G SHF L  +EG  ++  L +++SG   P Y+ ++ G   K  I
Sbjct: 295 LDRVKGASHFELGEKEGAALIQELSKRLSGYAIPRYVREIAGEAHKTPI 343


>gi|188496002|ref|ZP_03003272.1| KamA family protein [Escherichia coli 53638]
 gi|254037160|ref|ZP_04871237.1| KamA family protein [Escherichia sp. 1_1_43]
 gi|300949103|ref|ZP_07163147.1| KamA family protein [Escherichia coli MS 116-1]
 gi|300957803|ref|ZP_07169983.1| KamA family protein [Escherichia coli MS 175-1]
 gi|301646590|ref|ZP_07246457.1| KamA family protein [Escherichia coli MS 146-1]
 gi|307140841|ref|ZP_07500197.1| hypothetical protein EcolH7_22227 [Escherichia coli H736]
 gi|312974047|ref|ZP_07788218.1| kamA family protein [Escherichia coli 1827-70]
 gi|331644894|ref|ZP_08346011.1| putative radical SAM domain protein [Escherichia coli H736]
 gi|188491201|gb|EDU66304.1| KamA family protein [Escherichia coli 53638]
 gi|226840266|gb|EEH72268.1| KamA family protein [Escherichia sp. 1_1_43]
 gi|300315484|gb|EFJ65268.1| KamA family protein [Escherichia coli MS 175-1]
 gi|300451442|gb|EFK15062.1| KamA family protein [Escherichia coli MS 116-1]
 gi|301075207|gb|EFK90013.1| KamA family protein [Escherichia coli MS 146-1]
 gi|309704652|emb|CBJ04002.1| radical SAM superfamily protein [Escherichia coli ETEC H10407]
 gi|310331581|gb|EFP98837.1| kamA family protein [Escherichia coli 1827-70]
 gi|323935461|gb|EGB31799.1| KamA family protein [Escherichia coli E1520]
 gi|331035869|gb|EGI08107.1| putative radical SAM domain protein [Escherichia coli H736]
          Length = 342

 Score =  172 bits (435), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 150/274 (54%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  +      DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+ +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336


>gi|91228408|ref|ZP_01262334.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01]
 gi|254230273|ref|ZP_04923663.1| lysine 2;3-aminomutase [Vibrio sp. Ex25]
 gi|262393005|ref|YP_003284859.1| lysine 2,3-aminomutase [Vibrio sp. Ex25]
 gi|269966836|ref|ZP_06180909.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91188049|gb|EAS74355.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01]
 gi|151937210|gb|EDN56078.1| lysine 2;3-aminomutase [Vibrio sp. Ex25]
 gi|262336599|gb|ACY50394.1| lysine 2,3-aminomutase [Vibrio sp. Ex25]
 gi|269828503|gb|EEZ82764.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 340

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 150/275 (54%), Gaps = 3/275 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  +E  + P    DP+ + ++  + G++H+Y +R L+ +   C V CR
Sbjct: 67  NPKDPLLRQVLPLSDEFEVHPGYSNDPLEEQDNE-VPGLLHKYRNRALMIVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     +  +    +     L Y+ ++ ++ EVIF+GGDPL+     +  +L+ + 
Sbjct: 126 YCFRRHFPYQENKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
           +I H++ LR HSR+P+V P R+  EL Q L+ +   + +  H NH  E ++E    + +L
Sbjct: 184 HIPHIKRLRIHSRLPVVIPARVTDELCQLLQASRLQIILVTHINHANEINDEFAEQMFKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+Q VLLKG+ND  E    L     +  I PYYLH  D   G +H+ ++ EE 
Sbjct: 244 KRAGVTLLNQGVLLKGVNDSVEAQVALSEALFDAGILPYYLHVLDKVQGAAHYFISDEEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           + I+  L  ++SG   P    ++ G   K  +D H
Sbjct: 304 KAIMRGLITRVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|226951346|ref|ZP_03821810.1| aminomutase [Acinetobacter sp. ATCC 27244]
 gi|226837868|gb|EEH70251.1| aminomutase [Acinetobacter sp. ATCC 27244]
          Length = 338

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 147/272 (54%), Gaps = 2/272 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P DP+  Q +P   EL   PE   DP+G+   + + G++H+Y  R LL L   C ++CR
Sbjct: 63  DPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQMAGVLHKYRSRFLLTLTGACAIHCR 122

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR      +  +  + D E    YI++   I EVI +GGDPL L+++++   L+ L 
Sbjct: 123 YCFRRHF--PYQENLPKNDDWENIKHYIEQNPLINEVILSGGDPLTLNNRKISLWLERLA 180

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            +  ++ILR HSRVPIV P R++ ELI  LK +   + + +H+NH  E  +   + + +L
Sbjct: 181 SLPQIKILRIHSRVPIVIPNRVDEELISILKNSRLRIIVVVHSNHAAELDDFTCSKLLQL 240

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
           +   I +L+Q+VLLKG+ND  + L  L     + R+ PYYLH  D   G  HF L   E 
Sbjct: 241 SLHHITVLNQAVLLKGVNDSAKTLTELSNRLFDARVMPYYLHVLDKVKGAQHFDLRSSEI 300

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             I + +   + G   P  + ++ G   K  +
Sbjct: 301 DHIYSDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|15639115|ref|NP_218561.1| hypothetical protein TP0121 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025355|ref|YP_001933127.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum
           SS14]
 gi|4033488|sp|O83158|Y121_TREPA RecName: Full=Uncharacterized KamA family protein TP_0121
 gi|3322385|gb|AAC65111.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189017930|gb|ACD70548.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059540|gb|ADD72275.1| putative radical SAM domain protein [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 355

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 143/266 (53%), Gaps = 9/266 (3%)

Query: 64  KEELNILPEER-------EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
           K ++   P+ER        DP+G++ +     +VH+Y +R+L+     C  +CR+CFRR 
Sbjct: 60  KRQVCFAPQERVVHACECADPLGEDRYCVTPFLVHQYANRVLMLATGRCFSHCRYCFRRG 119

Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
            +  + G +  +++ E  + Y++    + E++ +GGDPL  S  ++  + + LR +    
Sbjct: 120 FIAQRAGWI-PNEEREKIITYLRATPSVKEILVSGGDPLTGSFAQVTSLFRALRSVAPDL 178

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           I+R  +R     PQ   PELI  L+E  KPV+I  H NHP E      A +     AG+ 
Sbjct: 179 IIRLCTRAVTFAPQAFTPELIAFLQEM-KPVWIIPHINHPAELGSTQRAVLEACVGAGLP 237

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           + SQSVLL+G+ND  E L  L      L +KP YL   DLA GT  FR+ + +   +  +
Sbjct: 238 VQSQSVLLRGVNDSVETLCTLFHALTCLGVKPGYLFQLDLAPGTGDFRVPLSDTLALWRT 297

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
           LKE++SGL  P   +DLPGG GK  +
Sbjct: 298 LKERLSGLSLPTLAVDLPGGGGKFPL 323


>gi|257063931|ref|YP_003143603.1| KamA family protein [Slackia heliotrinireducens DSM 20476]
 gi|256791584|gb|ACV22254.1| KamA family protein [Slackia heliotrinireducens DSM 20476]
          Length = 407

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/295 (34%), Positives = 164/295 (55%), Gaps = 10/295 (3%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           ++ I  +Y + + P   +L+NP++P+DP+ R  IP  EEL+       D  G++  + L 
Sbjct: 40  LESIQENYPLLVNPYYLSLVNPNDPDDPVRRMCIPAAEELDF--SGLADTSGESKSTVLP 97

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           G+ H+Y +  L+   + C +YCR CFRR +VG      +  ++ +A   YI++  +I  V
Sbjct: 98  GLQHKYAETALVLSTNQCAMYCRHCFRRRLVGRDADETV--RNIDAVADYIRDHEEITNV 155

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGK 205
           + +GGD L+ S++ L + L+ L  I H++ +R  +R+P+V PQRI  +P LI  L     
Sbjct: 156 LISGGDALMNSNETLFRYLEALAPIPHLKTIRLGTRIPVVLPQRITDDPGLIDLLSGFNH 215

Query: 206 PV--YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
            V  ++    NHP E + E+  AI  L   GI + +Q+VLLKG+ND PE LA LM   V 
Sbjct: 216 IVQLHVVTQFNHPNEITPESRDAIRILLELGIPVRNQTVLLKGVNDTPETLARLMDDLVG 275

Query: 264 LRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGG 316
           + I PYY+       G  + F++ I  G  IVA  + ++SGL + F YI+    G
Sbjct: 276 IGIVPYYVFQCRPTVGVKNRFQVPILTGCNIVAQARAQLSGLAKSFRYIMSHDAG 330


>gi|282890405|ref|ZP_06298933.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499787|gb|EFB42078.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 326

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 144/281 (51%), Gaps = 5/281 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           + + L   +A  I  +  +DPI +QF+P   E   L     DP+GD   +    ++H+Y 
Sbjct: 43  FPLNLPKRLAEKIKKNTLDDPILKQFLPTLAEQKQLAGFTLDPVGDTQFTKAPKLLHKYN 102

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            R L+     C + CRFCFR+          +  K  +  L  I     + E+I +GGDP
Sbjct: 103 GRALIVCTSACVMNCRFCFRQNF-----DYEVQEKGFQKELELIAADETLQEIILSGGDP 157

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L LS   L  +L  L +IKHV+ +RFH+R PI  P+RI+   +   +      +  +H N
Sbjct: 158 LSLSDTVLVHLLDALSHIKHVKRVRFHTRFPIGIPERIDDAFLNLFENRPFITWFVLHTN 217

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           HP E  +     +  L   G+ILL+QSVLLKG+ND P++L  L    V   I PYYLH  
Sbjct: 218 HPNELDDHIFHHLHLLQRKGVILLTQSVLLKGVNDCPKVLCELFNQLVNRGIIPYYLHQL 277

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
           D   G +HF ++ E G++++  + + + G   P Y+ ++ G
Sbjct: 278 DRVQGGAHFEVSEERGKELIQEIAKSLPGYAVPKYVREIAG 318


>gi|332977595|gb|EGK14363.1| KamA family protein [Psychrobacter sp. 1501(2011)]
          Length = 371

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 148/276 (53%), Gaps = 2/276 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P DP+  Q +P K E   +     DP+ +N  +P+KG++H+Y  R+L+ +   C ++CR
Sbjct: 96  DPKDPLLLQVLPSKLEQAKISGYVTDPLAENEQNPIKGLLHKYHSRVLVTVTGACAIHCR 155

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFR+      +G +  S+  E    YI +  +I EV+ +GGDPL LS++RL   L  L 
Sbjct: 156 YCFRQHF--DYQGNLPKSEQLELIQDYISQHPEIREVLLSGGDPLSLSNRRLFLWLDALE 213

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            +  +  +R H+R+PIV P+R++ EL+  L+ +   + + +H NH  E  E     + + 
Sbjct: 214 ALPQISTIRIHTRLPIVIPERLDSELLSRLQASRCRIVMVVHTNHANEIDEHTANYLLQA 273

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
              GI LL+Q+VLL GIND   +  +L        + PYYLH  D   G +HF +T    
Sbjct: 274 RQKGITLLNQTVLLAGINDSVSVQVDLSERLFAAGVLPYYLHLLDKVEGAAHFDMTQRRA 333

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
            ++   + +++ G   P  + +LP    K  +D +N
Sbjct: 334 VELYWEMLQQLPGYLVPKLVQELPNRPFKTPVDLYN 369


>gi|258625680|ref|ZP_05720559.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258581918|gb|EEW06788.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 340

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 149/276 (53%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P   E    P    DP+ + N++ + G++H+Y +R LL +   C + CR
Sbjct: 67  NPYDPLLRQVLPLGAEFEAHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +
Sbjct: 126 YCFRRHFPYEDNKG---SKVIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLVERI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI  EL++   +    V +  H NH  E + E    ++R
Sbjct: 183 ATIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLLKG+N+  E    L  T  +  I PYYLH  D   G +HF +  +E
Sbjct: 243 LRAINVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVGDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 303 ARQIMAGLIERVSGYLVPKLTREIGGKPSKTPLDLH 338


>gi|317493548|ref|ZP_07951969.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918491|gb|EFV39829.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 344

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 155/291 (53%), Gaps = 5/291 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRY 93
           +++ +    A  +   +PNDP+  Q +    E    P    DP+ + + +  + G++H+Y
Sbjct: 51  FALRVPYAFARRMKKGDPNDPLLLQVMTSASEFITTPGYSTDPLEEQDDAIAVPGLLHKY 110

Query: 94  PDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
            +R LL +   C V CR+CFRR       +G   +  +   AL YI+++ ++ E+IF+GG
Sbjct: 111 INRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQQPELDEIIFSGG 167

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           DPL+     L  +L  +  I H++ LR HSR+P+V P RI   L +   ++   + +  H
Sbjct: 168 DPLMAKDHELAWLLDEIEAIPHIKRLRIHSRLPVVIPARITETLTKRFSQSHLQILLVTH 227

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
            NH  E   E   A++RL +AG+ LL+Q VLL+G+ND+ + LA L     +  I PYYLH
Sbjct: 228 INHANEIDRELCDAMTRLKHAGVTLLNQGVLLRGVNDNADTLAALSNALFDAGIMPYYLH 287

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             D   G +HF ++ +E + I+  L  K+SG   P    ++ G   K  ID
Sbjct: 288 VLDRVQGAAHFMVSDDEARVIMRELMTKVSGYMVPKLTREIGGEPSKTPID 338


>gi|89075329|ref|ZP_01161751.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34]
 gi|89048878|gb|EAR54447.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34]
          Length = 340

 Score =  171 bits (433), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 147/274 (53%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +P ++E  +      DP+ +  +  + G++H+Y +R+LL +   C V CR
Sbjct: 67  NPHDPLLRQILPLEQEFEVHQGYSIDPLKEQQND-IPGLLHKYHNRVLLIVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +    + +L YI    +I EVI +GGDPL+     LQ +++ +
Sbjct: 126 YCFRRHFPYSDNKG---NKHQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLVEHI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI   L Q L E      +  H NH  E  +    A+ +
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMGK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  A + LL+Q VLLKG+ND  + L +L     +  I+PYYLH  D   G +HF +  E 
Sbjct: 243 LKQANVTLLNQGVLLKGVNDSVKALTDLSEALFDAGIQPYYLHVLDRVQGAAHFMIDDET 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++++A L  ++SG   P    ++ G   K  +D
Sbjct: 303 ARQLIAGLITQVSGYLVPKLTREIGGRASKTPLD 336


>gi|22124525|ref|NP_667948.1| hypothetical protein y0611 [Yersinia pestis KIM 10]
 gi|45440363|ref|NP_991902.1| hypothetical protein YP_0509 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51594759|ref|YP_068950.1| hypothetical protein YPTB0407 [Yersinia pseudotuberculosis IP
           32953]
 gi|108809919|ref|YP_653835.1| hypothetical protein YPA_3929 [Yersinia pestis Antiqua]
 gi|108813477|ref|YP_649244.1| hypothetical protein YPN_3317 [Yersinia pestis Nepal516]
 gi|145600867|ref|YP_001164943.1| hypothetical protein YPDSF_3620 [Yersinia pestis Pestoides F]
 gi|150260603|ref|ZP_01917331.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125]
 gi|153950672|ref|YP_001402627.1| KamA family iron-sulfur cluster-binding protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|218927556|ref|YP_002345431.1| hypothetical protein YPO0353 [Yersinia pestis CO92]
 gi|229836612|ref|ZP_04456778.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A]
 gi|229840221|ref|ZP_04460380.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842302|ref|ZP_04462457.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903959|ref|ZP_04519072.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516]
 gi|21957321|gb|AAM84199.1|AE013663_5 hypothetical protein y0611 [Yersinia pestis KIM 10]
 gi|45435219|gb|AAS60779.1| Lysine 2,3-aminomutase [Yersinia pestis biovar Microtus str. 91001]
 gi|51588041|emb|CAH19647.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108777125|gb|ABG19644.1| L-lysine 2,3-aminomutase [Yersinia pestis Nepal516]
 gi|108781832|gb|ABG15890.1| L-lysine 2,3-aminomutase [Yersinia pestis Antiqua]
 gi|115346167|emb|CAL19035.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|145212563|gb|ABP41970.1| L-lysine 2,3-aminomutase [Yersinia pestis Pestoides F]
 gi|149290011|gb|EDM40088.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125]
 gi|152962167|gb|ABS49628.1| iron-sulfur cluster-binding protein, KamA family [Yersinia
           pseudotuberculosis IP 31758]
 gi|229679729|gb|EEO75832.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516]
 gi|229690612|gb|EEO82666.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696587|gb|EEO86634.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229706296|gb|EEO92304.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A]
 gi|320013781|gb|ADV97352.1| lysine 2,3-aminomutase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 342

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P N +DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 63  MQPGNASDPLLLQVLTAREEFITAPGFTHDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 121

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGDPL+     L  +
Sbjct: 122 VNCRYCFRRHFPYQDNQG---NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWL 178

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  L  IKH++ LR H+R+P+V P RI   L Q L  +   V +  H NH  E       
Sbjct: 179 LDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRD 238

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           +++RL  AG+ LL+QSVLL+G+N+D ++LA L     +  I PYY+H  D   G +HF +
Sbjct: 239 SMARLKQAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 298

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 299 DDDEARQLMKGLLSRVSGYLVPRLTREVGGEPSKTPLD 336


>gi|90020728|ref|YP_526555.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40]
 gi|89950328|gb|ABD80343.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40]
          Length = 346

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 148/300 (49%), Gaps = 4/300 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           + + +T   A+ I P + +DP+ RQ +P   EL        DP+ + + +P  G++H+Y 
Sbjct: 49  FPLRVTQSYASRIKPGDVDDPLLRQVLPLGAELTSPASYTADPLAEQSFNPAPGVIHKYH 108

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            R+LL     C + CR+CFRR      +    S  + + AL YI +   I EVI +GGDP
Sbjct: 109 GRVLLISASQCAINCRYCFRRHF--DYQTNTPSRAEWQEALRYIADNESIDEVILSGGDP 166

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L +S +++Q ++  +  I HV  LR H+R+P+V P RI  EL+  L +      I +H N
Sbjct: 167 LAVSDRQMQWLVNQIAVIPHVTRLRIHTRLPVVLPNRITSELVDTLVKTRLQCVIVVHIN 226

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           H  E  E     +  L  A I LL+QSVLLKG+ND    L +L +      I PYYLH  
Sbjct: 227 HAAEIDEHVHNRLKILKKANITLLNQSVLLKGVNDSASCLVSLSKRLFSCGILPYYLHLL 286

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI--DTHNIKKVGN 332
           D   G +HF +       +   L   + G   P  + ++P    K  +    HN+    N
Sbjct: 287 DKVTGAAHFDVDEASAIALHNHLLATLPGYLVPKLVREVPNAASKTAVYGAEHNLGYTNN 346


>gi|162419358|ref|YP_001605297.1| KamA family iron-sulfur cluster-binding protein [Yersinia pestis
           Angola]
 gi|165926739|ref|ZP_02222571.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165936461|ref|ZP_02225029.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011849|ref|ZP_02232747.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166214027|ref|ZP_02240062.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167400635|ref|ZP_02306144.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419290|ref|ZP_02311043.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167423829|ref|ZP_02315582.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|170026033|ref|YP_001722538.1| lysine 2,3-aminomutase YodO family protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186893766|ref|YP_001870878.1| lysine 2,3-aminomutase YodO family protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|270489053|ref|ZP_06206127.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27]
 gi|294502464|ref|YP_003566526.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           Z176003]
 gi|162352173|gb|ABX86121.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           Angola]
 gi|165915577|gb|EDR34186.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165921362|gb|EDR38586.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989208|gb|EDR41509.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166204822|gb|EDR49302.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166963284|gb|EDR59305.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050003|gb|EDR61411.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057999|gb|EDR67745.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169752567|gb|ACA70085.1| lysine 2,3-aminomutase YodO family protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186696792|gb|ACC87421.1| lysine 2,3-aminomutase YodO family protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|262360494|gb|ACY57215.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           D106004]
 gi|270337557|gb|EFA48334.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27]
 gi|294352923|gb|ADE63264.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           Z176003]
          Length = 334

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P N +DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 55  MQPGNASDPLLLQVLTAREEFITAPGFTHDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGDPL+     L  +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWL 170

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  L  IKH++ LR H+R+P+V P RI   L Q L  +   V +  H NH  E       
Sbjct: 171 LDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRD 230

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           +++RL  AG+ LL+QSVLL+G+N+D ++LA L     +  I PYY+H  D   G +HF +
Sbjct: 231 SMARLKQAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLTREVGGEPSKTPLD 328


>gi|330444985|ref|ZP_08308639.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328493103|dbj|GAA03136.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 340

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 146/274 (53%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  +E  +      DP+ +   + + G++H+Y +R+LL +   C V CR
Sbjct: 67  NPYDPLLRQILPLAQEFEVHQGYSVDPL-EEQQNEIPGLLHKYHNRVLLIVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   + +  + +L YI    +I EVI +GGDPL+     LQ +++ +
Sbjct: 126 YCFRRHFPYSDNKG---NKRQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLIEHI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI   L Q L E      +  H NH  E  +    A+ +
Sbjct: 183 AAIPHIKRLRIHSRLPVVIPNRITDALCQILTETRLQTILVTHINHANEIDDALKTAMQK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  A + LL+Q VLLKG+ND    L +L  T  +  I+PYYLH  D   G +HF +  E 
Sbjct: 243 LKQANVTLLNQGVLLKGVNDSVAALTDLSETLFDAGIQPYYLHVLDRVQGAAHFMVDDEI 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++++A L  K+SG   P    ++ G   K  +D
Sbjct: 303 ARQLMAGLITKVSGYLVPKLTREIGGRASKTPLD 336


>gi|262364441|gb|ACY60998.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           D182038]
          Length = 334

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P N +DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 55  MQPGNASDPLLLQVLTAREEFITAPGFTHDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGDPL+     L  +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWLKALDYIRQHPELDEIIFSGGDPLMAKDHELSWL 170

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  L  IKH++ LR H+R+P+V P RI   L Q L  +   V +  H NH  E       
Sbjct: 171 LDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRD 230

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           +++RL  AG+ LL+QSVLL+G+N+D ++LA L     +  I PYY+H  D   G +HF +
Sbjct: 231 SMARLKQAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLTREVGGEPSKTPLD 328


>gi|332994506|gb|AEF04561.1| lysine 2,3-aminomutase YodO family protein [Alteromonas sp. SN2]
          Length = 341

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 153/283 (54%), Gaps = 3/283 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A+L+   NPNDP+  Q +P K+E +I P   +DP+ +++ +  KG++H+Y  R+LL + 
Sbjct: 59  FASLMEKGNPNDPLFLQVMPLKQEFSIEPGYTKDPLEEHDTAG-KGLLHKYDSRVLLMVR 117

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C V CR+CFRR    +     ++    + AL YI     I EVIF+GGDPL+     L
Sbjct: 118 TGCAVNCRYCFRRHFPYADNA--VNKAQWQEALDYIAGNPAINEVIFSGGDPLMAKDDHL 175

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
             + K +  I H++ LR H+R+P+V P+R++        +      + +HANH  E S  
Sbjct: 176 AALAKEIAAIPHIKRLRIHTRLPVVLPERLDNAFFDWFTQLPIQKILVLHANHSNEVSPA 235

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
             + + +L   G+ LL+QSVLLK +ND  + +  L     +  + PYYLH  D   G SH
Sbjct: 236 LKSRLEKLRTHGVTLLNQSVLLKDVNDSADAVCELSERLFDAGVMPYYLHVLDKVEGASH 295

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           F ++ ++ ++I+    +++ G   P  + ++    GK  ID H
Sbjct: 296 FYVSDDKARQIMQEAIKRLPGFLVPKLVREIGAQPGKTPIDLH 338


>gi|238784793|ref|ZP_04628795.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC
           43970]
 gi|238714306|gb|EEQ06316.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC
           43970]
          Length = 335

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 94/278 (33%), Positives = 151/278 (54%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P +P DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 55  MQPGDPFDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGDPL+     L  +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWL 170

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  L  I H++ LR H+R+P+V P RI   L Q L ++   V +  H NH  E  +    
Sbjct: 171 LDELESISHIKRLRIHTRLPVVIPARITAALCQRLSDSRLQVLMVTHINHANEIDQPLRD 230

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           ++++L  AG+ LL+QSVLL+G+N+D E+L  L     +  I PYY+H  D   G +HF +
Sbjct: 231 SMAQLKQAGVTLLNQSVLLRGVNNDAEVLTTLSNALFDAGILPYYIHVLDKVQGAAHFMV 290

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 328


>gi|153875802|ref|ZP_02003435.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
 gi|152067734|gb|EDN66565.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
          Length = 334

 Score =  171 bits (432), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 145/265 (54%), Gaps = 5/265 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +PNDP+ RQ +P  +E   +     DP+GD+    + G++ +Y  RIL      C ++CR
Sbjct: 67  DPNDPLLRQVLPLIDEQKQVLGFGVDPVGDSAAEKVPGLLQKYQGRILWLTTTACAIHCR 126

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFR+    S+     +    +  L  I+  + I EVI +GGDPL+L    L ++ K+L 
Sbjct: 127 YCFRQHYPTSK-----TKLYYQRVLDTIRADTSITEVILSGGDPLMLLDSDLAEMAKSLA 181

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I  VQ LR H+R+PIV P R+N EL+  L E    + + +HANH  E   E  +A+ +L
Sbjct: 182 DIPQVQRLRLHTRLPIVLPTRVNNELLTWLTETRLQLIVVVHANHANEIDNEVKSALQKL 241

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AGI +L+QSVLL+GIND+   L  L     + R+ PYYLH  D   G +HF +  +  
Sbjct: 242 VTAGITVLNQSVLLRGINDNATALMALSEILFDSRVLPYYLHVLDRVQGAAHFEVPEQTA 301

Query: 291 QKIVASLKEKISGLCQPFYILDLPG 315
            +++  ++  + G   P  + ++ G
Sbjct: 302 LELLEKMRVALPGYLVPKLVREVTG 326


>gi|13474986|ref|NP_106545.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
 gi|14025732|dbj|BAB52331.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
          Length = 427

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 21/303 (6%)

Query: 36  SIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEE---REDPIGDNNHSPLKGIVH 91
           ++ +TP + NLI+  N   DPI +QFIP   EL  LP     + D + +   SP+ G+VH
Sbjct: 56  ALRITPYLLNLIDWSNFLEDPIRKQFIPVGSEL--LPSHPLLKMDSLHERKSSPVDGLVH 113

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EAALAYIQEKSQIW 145
           RY D++LL     CPVYCRFC R   VG    +VL  K +      +  LAY++    I 
Sbjct: 114 RYKDKVLLLATDRCPVYCRFCTRSYSVGLDTQSVLKKKVSPFQSRWDTILAYLRVTPVIA 173

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-----LIQCL 200
           +V+ +GGD   L   RL  +   L  I  ++ +RF ++   V P +I  +      +  +
Sbjct: 174 DVVVSGGDCFRLKPSRLLAIGMGLLSIPSIRRIRFATKGLAVLPMKITSDHKWTDALVNI 233

Query: 201 KEAGKPVYIAI----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
            +AG+   + I    H NHP E ++  IAA   L   GI + +QSVL+ G+NDDPE++  
Sbjct: 234 SDAGRDQGVEISFHTHFNHPREITDYTIAAAELLFKRGIRMRNQSVLMAGVNDDPEVMKQ 293

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L++   +L I+PYY++  DL  G  H R ++    +I  +++   +G   P +++D PGG
Sbjct: 294 LVKKLSDLHIQPYYVYTCDLVDGIEHMRCSVRLACQIEKAVRGITAGYNTPLFVVDTPGG 353

Query: 317 YGK 319
            GK
Sbjct: 354 GGK 356


>gi|121998759|ref|YP_001003546.1| lysine 2,3-aminomutase YodO family protein [Halorhodospira
           halophila SL1]
 gi|121590164|gb|ABM62744.1| L-lysine 2,3-aminomutase [Halorhodospira halophila SL1]
          Length = 342

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 142/276 (51%), Gaps = 6/276 (2%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I P +PNDP+ RQ +P   EL   P    DP+ +       G++ +Y  R LL     C 
Sbjct: 68  IRPGDPNDPLLRQVLPIGAELETHPGYTADPLAEQGARTGSGVLQKYNGRSLLIATGGCA 127

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           ++CR+CFRR    +++           AL  +++     EVI +GGDPL+L  + L   L
Sbjct: 128 IHCRYCFRRCFPYNREA------GWRTALDQLEQHGAPEEVILSGGDPLLLDDQALGACL 181

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           + L  I  V+ +R H+R+P+V P R+   L + L +      I +HANHP E   E  +A
Sbjct: 182 ERLGRIAAVRRVRIHTRLPVVIPSRVTAALARHLGQIRLQSVIVVHANHPREIDAEVSSA 241

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           ++RL N    +L+Q+VLL+G+NDD   LA+L        + PYYLH  D  AG +HF + 
Sbjct: 242 LARLRNVCSTVLNQTVLLRGVNDDTATLASLSERLFAADVLPYYLHLLDPVAGAAHFDVD 301

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            + GQ++ A L   + G   P    + PG   K  I
Sbjct: 302 AKTGQRLWAELARSLPGYLVPRLAREEPGAAAKTVI 337


>gi|319789677|ref|YP_004151310.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
           ammonificans HB-1]
 gi|317114179|gb|ADU96669.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
           ammonificans HB-1]
          Length = 372

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 170/313 (54%), Gaps = 12/313 (3%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K+L   +  +   +   E+ ++++E+   + + +    A LI+  +PNDPI     P  +
Sbjct: 7   KSLEEVEQAFGVKIPDSER-EKLQEVIEKHPMFIPDYYARLIDWSDPNDPIKNIIFPSLD 65

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL++      D  G+  ++ L G+ H+Y +  LL + + C  YCR CFR+ +VG      
Sbjct: 66  ELDV--SGSYDTSGEKENTVLTGLQHKYKETALLLVTNRCAGYCRHCFRKRLVGIPTNET 123

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L   D   A+ YI+E  +I  V+ +GGDPL+L    ++  L  L  I H++ +RF SRVP
Sbjct: 124 LKLFD--RAVEYIKEHPEITNVLISGGDPLVLPTDVIEYFLSELSKIPHLKFIRFGSRVP 181

Query: 186 IVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           +  P RI  + +L++   +   P   VY+  H NHP E ++EA  A+  L  AG+ + +Q
Sbjct: 182 VFYPMRIYEDTKLLEVFSKYSTPERRVYLVTHFNHPNEVTKEARKAVDSLIRAGVPVSNQ 241

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKE 299
           +VLLKG+ND PE+LA LM+      + PYY+     ++   +HF++ ++EG  IV   K 
Sbjct: 242 TVLLKGVNDTPEVLATLMKEITSAGVIPYYVFQCRPVSRVKTHFQVPLKEGYWIVEGAKR 301

Query: 300 KISGLCQPF-YIL 311
            + G  + F YI+
Sbjct: 302 MLDGHAKRFKYIM 314


>gi|238793387|ref|ZP_04637013.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC
           29909]
 gi|238727356|gb|EEQ18884.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC
           29909]
          Length = 335

 Score =  170 bits (430), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 149/274 (54%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P+DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C V CR
Sbjct: 59  DPSDPLLLQVLTAREEFIAAPGFTTDPL-DEQRSVVPGLLHKYHNRALLLVKGGCAVNCR 117

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   +  +   AL YI++  ++ E+IF+GGDPL+     L  +L  L
Sbjct: 118 YCFRRHFPYQDNQG---NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDEL 174

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR H+R+P+V P RI   L Q L +    V +  H NH  E  +    ++++
Sbjct: 175 ENIAHIKRLRIHTRLPVVIPDRITAALCQRLGDTRLQVLMVTHINHANEIDQPLRDSMAQ 234

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+GINDD E+LA L     +  I PYY+H  D   G +HF +  +E
Sbjct: 235 LKRAGVTLLNQSVLLRGINDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDE 294

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + ++  L  ++SG   P    ++ G   K  +D
Sbjct: 295 ARLLMKGLLCRVSGYLVPRLAREIGGELSKTPLD 328


>gi|294624428|ref|ZP_06703117.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292601277|gb|EFF45325.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 342

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 139/267 (52%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E+   P    D +GD       G++ +Y  R LL     C V+CR+C
Sbjct: 75  HDPLLRQVLPLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYC 134

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    +++    +      A+  I     I EV+ +GGDPL L+  +L ++   L  +
Sbjct: 135 FRRHFPYAEETA--ARDGWRDAVVAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAV 192

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+PIV P+R++  L+  L+    PV   +HANH  EF     AA   L  
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLRE 252

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AG  LL+Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF +     + 
Sbjct: 253 AGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           + A L  ++SG   P  + ++PG  GK
Sbjct: 313 LHAELAARLSGYLVPRLVREIPGDTGK 339


>gi|149377740|ref|ZP_01895474.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893]
 gi|149357966|gb|EDM46454.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893]
          Length = 241

 Score =  170 bits (430), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 88/239 (36%), Positives = 133/239 (55%), Gaps = 2/239 (0%)

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           P  G++ +Y  R LL +   C + CR+CFRR      +   LS +D   A+  + E +++
Sbjct: 2   PATGLIRKYDSRALLMVTGQCAINCRYCFRRHF--PYEDHRLSPEDRTQAIKTLSEDTRL 59

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            EVIF+GGDPL+ + + L    + L  I H++ LR H+R+P+V PQR+   LI+ L  + 
Sbjct: 60  NEVIFSGGDPLVANDRLLSAWAEALAAIPHIRRLRVHTRLPVVIPQRVTDSLIKWLSGSR 119

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
               + IH NHP E   +   A+ RL  AGI LL+QSV+LKG+ND+  +LA L     E 
Sbjct: 120 LQAVVVIHVNHPAELDADTQRALERLKAAGITLLNQSVVLKGVNDNARVLAELSERLFEC 179

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + PYYLH  D  AG  HF ++  + + +V  L   + G   P  + ++PG  GK  +D
Sbjct: 180 GVLPYYLHAFDPVAGAHHFEVSDNKARDLVRQLITLLPGFLVPRLVREIPGQSGKTPLD 238


>gi|88704864|ref|ZP_01102577.1| conserved hypothetical protein [Congregibacter litoralis KT71]
 gi|88701185|gb|EAQ98291.1| conserved hypothetical protein [Congregibacter litoralis KT71]
          Length = 345

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/277 (36%), Positives = 146/277 (52%), Gaps = 11/277 (3%)

Query: 51  NPNDPIARQF--IPQKEELNILPEE--REDPIGDNN-HSPLKGIVHRYPDRILLKLLHVC 105
           N  DP+ RQ   +PQ+     LP E   +DP+G+ + ++   G++ +Y  R LL     C
Sbjct: 67  NAWDPLLRQVLAVPQEN----LPAEGFSDDPVGETSLYADTPGVIQKYQGRALLVATGQC 122

Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
            V CR+CFRR           SSK+  AA+  +     I EVI +GGDPL+L    L  +
Sbjct: 123 AVNCRYCFRRSYPYGDNSQ--SSKERLAAIDTLLADPSIGEVILSGGDPLLLPDASLAAI 180

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
            + LR       LR H+R+PIV P R+   LI  L    + V + +H+NHP E   +   
Sbjct: 181 ARRLRGNTRGITLRIHTRLPIVIPDRVTASLIDALMPREQRVVVVVHSNHPREIDHDTAR 240

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           A+ RL + G+ +L+QSVLLKGINDD ++LA L          PYYLH  D  AG++HF +
Sbjct: 241 ALERLRDGGVTVLNQSVLLKGINDDADVLAELSDQLFAAGAMPYYLHMLDKVAGSAHFEV 300

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           +    ++I+  L  K  G   P   +++PG   K +I
Sbjct: 301 SELRARQILGQLASKRPGYLVPKLAVEVPGADSKREI 337


>gi|82546608|ref|YP_410555.1| hypothetical protein SBO_4310 [Shigella boydii Sb227]
 gi|187731271|ref|YP_001882838.1| KamA family protein [Shigella boydii CDC 3083-94]
 gi|81248019|gb|ABB68727.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|187428263|gb|ACD07537.1| KamA family protein [Shigella boydii CDC 3083-94]
 gi|320176659|gb|EFW51700.1| Lysine 2,3-aminomutase [Shigella dysenteriae CDC 74-1112]
 gi|320187554|gb|EFW62238.1| Lysine 2,3-aminomutase [Shigella flexneri CDC 796-83]
 gi|332087151|gb|EGI92285.1| kamA family protein [Shigella boydii 3594-74]
          Length = 349

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 144/258 (55%), Gaps = 5/258 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  +      DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L
Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+PIV P RI   L++    +   + +  H NH  E  E    A+++
Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+QSVLL+ +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E
Sbjct: 243 LRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302

Query: 290 GQKIVASLKEKISGLCQP 307
            ++I+  L   +SG   P
Sbjct: 303 ARQIMRELLTLVSGYLVP 320


>gi|188535099|ref|YP_001908896.1| hypothetical protein ETA_29810 [Erwinia tasmaniensis Et1/99]
 gi|188030141|emb|CAO98027.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
          Length = 342

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/289 (33%), Positives = 152/289 (52%), Gaps = 3/289 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A  +   +P DP+  Q I  ++E    P    DP+ D   S + G++H+Y 
Sbjct: 51  FALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPL-DEQSSVVPGLLHKYR 109

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +R LL +   C V CR+CFRR     +     + ++ + AL YI+++ ++ E+IF+GGDP
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIFSGGDP 167

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L+     L  ++  L +I H++ LR HSR+P+V P+RI   L Q L ++     +  H N
Sbjct: 168 LMAKDHELDWLIAQLEHIPHIKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLMVTHIN 227

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           H  E  +E    +  L  AG+ LL+QSVLL+ INDD   LA L     +  I PYYLH  
Sbjct: 228 HAQEIDDELRHGMRMLKRAGVTLLNQSVLLRDINDDAVTLAALSNALFDAGILPYYLHVL 287

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           D   G +HF ++ E  + IV  L   +SG   P    ++ G   K  +D
Sbjct: 288 DKVQGAAHFYVSDERARAIVRELLTNVSGYMVPKLAREIGGEPSKTPLD 336


>gi|238756148|ref|ZP_04617468.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC
           29473]
 gi|238705622|gb|EEP98019.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC
           29473]
          Length = 334

 Score =  169 bits (429), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 150/274 (54%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +  DP+  Q +  +EE   +P   +DP+ D   S + G++H+Y +R LL +   C V CR
Sbjct: 59  DAKDPLLLQVLTAREEFIAVPGFTDDPL-DEQRSVVPGLLHKYHNRALLLVKGGCAVNCR 117

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   +  + + AL YI +  ++ E+IF+GGDPL+     L  ++  L
Sbjct: 118 YCFRRHFPYQDNQG---NKANWQQALDYIAQHPELDEIIFSGGDPLMAKDHELDWLITQL 174

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR H+R+P+V P RI   L Q L ++   V +  H NHP E  +    +++R
Sbjct: 175 ENIAHIKRLRIHTRLPVVIPARITSTLCQRLLDSRLQVLLVTHINHPNEIDQSLCDSMAR 234

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+ +N+DP++LA L        I PYY+H  D   G +HF +  +E
Sbjct: 235 LKQAGVTLLNQSVLLRDVNNDPDVLAALSHALFNAGILPYYIHVLDKVQGAAHFMVDDDE 294

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + ++  L  ++SG   P    ++ G   K  +D
Sbjct: 295 ARLLIKGLLSRVSGYLVPRLAREIGGEPSKTPLD 328


>gi|197286378|ref|YP_002152250.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
 gi|194683865|emb|CAR45006.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
          Length = 342

 Score =  169 bits (428), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 148/274 (54%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +PNDP+  Q +    E  + P    DP+ D   + + G++H+Y +R LL +   C V CR
Sbjct: 67  DPNDPLLLQVLTAHAEFTLTPGFSTDPL-DEQQNAVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +  + + A+ YI+   ++ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYEDNKG---NKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI   L Q L+++     + +H NH  E  +    A  +
Sbjct: 183 EAIPHIKRLRIHSRLPVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDDALREACLK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L NA + LL+Q VLL+G+ND+ + LA+L R   +  I PYYLH  D   G +HF +   E
Sbjct: 243 LKNAHVTLLNQGVLLRGVNDNAQTLADLSRALFDAGIMPYYLHVLDKVQGAAHFMVPDSE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+ SL   +SG   P    ++ G   K  +D
Sbjct: 303 AREIMKSLMSLVSGYMVPKLTREIGGEPSKTLLD 336


>gi|113461431|ref|YP_719500.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT]
 gi|112823474|gb|ABI25563.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT]
          Length = 337

 Score =  169 bits (428), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 99/258 (38%), Positives = 139/258 (53%), Gaps = 5/258 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+  Q +  + E   +    +DP+ +  H+ +  I+H+Y +R+LL + + C V CR
Sbjct: 67  NPNDPLFLQVMASQHEFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   + +    +L YI   ++I EVIF+GGDPL+     L  ++K L
Sbjct: 126 YCFRRHFPYAENKG---NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKEL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H+  LR H+R+P+V PQRI  EL + L E+     I  H NHP E  E    A+ +
Sbjct: 183 ENIPHLHTLRIHTRLPVVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L +A + LL+QSV+LK IND+  IL  L      + I PYYLH  D   G SHF L  E 
Sbjct: 243 LKHANVTLLNQSVVLKNINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDES 302

Query: 290 GQKIVASLKEKISGLCQP 307
              I   L+   SG   P
Sbjct: 303 AAAIYKELQRISSGYLVP 320


>gi|297583799|ref|YP_003699579.1| lysine 2,3-aminomutase YodO family protein [Bacillus
           selenitireducens MLS10]
 gi|297142256|gb|ADH99013.1| lysine 2,3-aminomutase YodO family protein [Bacillus
           selenitireducens MLS10]
          Length = 386

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/292 (33%), Positives = 160/292 (54%), Gaps = 13/292 (4%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE--REDP 77
           +  E+  ++K+I+  +   +      LI+  +P DPI +  IP + EL    EE  R D 
Sbjct: 16  LSDEEKAKLKQITEKFVFRVNEYYLGLIDWGDPKDPIRKLVIPNEGEL----EEYGRWDA 71

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
             ++ +  + G  H+Y +  LL +  VC  YCR+CFR+ +  +     +S  D +  + Y
Sbjct: 72  SDEDTNYVVPGCQHKYDETALLIVSEVCGAYCRYCFRKRLFRNDIKEAMS--DVQPGIDY 129

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE 195
           I+E  +I  V+ TGGD LIL+ K+L+ +++ LR I HV+I+R  S++P+ +P RI  + E
Sbjct: 130 IKEHPEISNVLLTGGDSLILATKKLRFIIEQLREIPHVKIIRLGSKMPVFNPMRIYEDQE 189

Query: 196 LIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           L+  + E     + +Y+  H NHP E + EA      L NAG I+++Q+ +L+GINDDP 
Sbjct: 190 LLDLISEYSTTEQRIYVMAHINHPNEITPEAKKGFDALHNAGAIVVNQTPVLRGINDDPV 249

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           +L  L+       + PYY       AG + F L+++E   IV   K + SGL
Sbjct: 250 VLGELLDQLSWAGVTPYYFFINRPVAGNNEFVLSLKEAYDIVEEAKARTSGL 301


>gi|311695405|gb|ADP98278.1| lysine 2,3-aminomutase YodO family protein [marine bacterium HP15]
          Length = 346

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 93/279 (33%), Positives = 145/279 (51%), Gaps = 2/279 (0%)

Query: 45  NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
           N +   NP DP+ RQ +P  +E    P    DP+ ++      G++ +Y  R LL +   
Sbjct: 67  NRMEKGNPADPLLRQVLPLADEAGHAPGFVSDPLEESGAIATTGLIRKYRSRALLMVTGQ 126

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C + CR+CFRR     ++   LS  D +  +  +    +I EVIF+GGDPL ++ + L +
Sbjct: 127 CAINCRYCFRRHFPYDEQR--LSPHDRQRVIDVLGASPEINEVIFSGGDPLAVNDRLLSQ 184

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
               +  I H++ LR H+R+P+V PQR+  EL++ L      V I +H NHP E      
Sbjct: 185 WASAISGIPHIRRLRLHTRLPVVIPQRVCDELLKWLSTTPLQVVIVLHINHPAEIDGPTR 244

Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
            A+  L  AG  LL+QSV+L+G+ND   +L  L  T  +  + PYYLH  D   G  HF 
Sbjct: 245 RALGYLRAAGATLLNQSVILRGVNDRTAVLEELSETLFDAGVLPYYLHAFDPVTGAHHFD 304

Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           ++ +E + +V  L  ++ G   P  + + PG   K  I+
Sbjct: 305 VSDDEARNLVRELLARLPGFLVPKLVREEPGKESKTPIN 343


>gi|78486083|ref|YP_392008.1| hypothetical protein Tcr_1742 [Thiomicrospira crunogena XCL-2]
 gi|78364369|gb|ABB42334.1| L-lysine 2,3-aminomutase [Thiomicrospira crunogena XCL-2]
          Length = 323

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 144/274 (52%), Gaps = 5/274 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            AN I   +PNDP+ +Q +P   E  + P    DP+GD   +P   ++H+Y  R LL   
Sbjct: 35  FANQIEKGSPNDPLLKQILPGLAEQELYPGFSPDPVGDLAANPQPSLIHKYHGRALLIAS 94

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C ++CR+CFRR     Q       +  +AAL  I +   I EVI +GGDP+ LS   L
Sbjct: 95  PRCDIHCRYCFRRHFPYEQA----KKQHWQAALENIAQDHSITEVILSGGDPMTLSENTL 150

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PELIQCLKEAGKPVYIAIHANHPYEFSE 221
            +++  +  I HV  LR HSR PIV PQ+ + P L++ L ++     + +H NH  E + 
Sbjct: 151 IELVHEIEAIPHVSTLRMHSRTPIVAPQKAHRPTLLKALSKSRLQTVLVVHCNHANELTP 210

Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
           E+   + +   + + LL+Q+VLLKGIND  + L+ L +      I PYY H  D  +G+ 
Sbjct: 211 ESADLMQQFRQSNVFLLNQTVLLKGINDSADTLSALSKKLFSQGILPYYCHLLDKVSGSG 270

Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
           HF +   +   I   L++ + G   P ++ ++ G
Sbjct: 271 HFDVQKHQAWAIFDQLRQALPGYLVPRFVEEIAG 304


>gi|329296403|ref|ZP_08253739.1| putative lysine aminomutase [Plautia stali symbiont]
          Length = 342

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 145/274 (52%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           N  DP+  Q +  ++E    P    DP+ D   S + G++H+Y +R +L +   C V CR
Sbjct: 67  NAQDPLLLQVLTSRQEFTDAPGYSTDPL-DEQSSVVPGLLHKYKNRAMLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ +AA+ YI    ++ E+IF+GGDPL+   + L  ++  L
Sbjct: 126 YCFRRHFPYQDNQG---NKRNWQAAIDYIAAHPELDEIIFSGGDPLMAKDQELAWLIGAL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P RI   L Q L +    V +  H NH  E  E     + R
Sbjct: 183 ENIPHLKRLRIHSRLPVVIPARITEGLCQLLADTRLQVLLVSHINHAQEIDEALRERMQR 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+G+NDD + LA L     +  I PYYLH  D   G +HF +  E+
Sbjct: 243 LKRAGVTLLNQSVLLRGVNDDAQTLAQLSNALFDAGILPYYLHVLDKVQGAAHFFVPDEQ 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + +V  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARALVRQLLTMVSGYMVPKLAREIGGEPSKTPLD 336


>gi|300715020|ref|YP_003739823.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
 gi|299060856|emb|CAX57963.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 342

 Score =  169 bits (428), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/290 (33%), Positives = 154/290 (53%), Gaps = 5/290 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A+ +   +P DP+  Q I   +E    P    DP+ D   S + G++H+Y 
Sbjct: 51  FALRVPRAFASRMQKGDPQDPLLLQVITASQEFVDAPGYSTDPL-DEQSSVVPGLLHKYR 109

Query: 95  DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           +R LL +   C V CR+CFRR       +G   + ++ + AL YI+E+ ++ E+IF+GGD
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKRNWQQALEYIREQPELDEIIFSGGD 166

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+     L  ++  L  I H++ LR HSR+P+V P RI   L Q L ++   V +  H 
Sbjct: 167 PLMAKDSELDWLIGELEQIPHLKRLRIHSRLPVVIPSRITRTLCQRLAQSRLQVLMVTHI 226

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NH  E  +    A+  L +AG+ LL+QSVLL+ INDD   LA L     +  + PYYLH 
Sbjct: 227 NHAQEIDDALRDALQLLKSAGVTLLNQSVLLRNINDDATTLATLSNALFDAGVLPYYLHV 286

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            D   G +HF ++ ++ + I+  L   +SG   P    ++ G   K  +D
Sbjct: 287 LDKVQGAAHFYVSDDDARAIMRELLANVSGYMVPKLAREIGGEPSKTPLD 336


>gi|170718464|ref|YP_001783679.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus
           2336]
 gi|168826593|gb|ACA31964.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus
           2336]
          Length = 337

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 99/258 (38%), Positives = 139/258 (53%), Gaps = 5/258 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+  Q +  + E   +    +DP+ +  H+ +  I+H+Y +R+LL + + C V CR
Sbjct: 67  NPNDPLFLQVMASQHEFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   + +    +L YI   ++I EVIF+GGDPL+     L  ++K L
Sbjct: 126 YCFRRHFPYAENKG---NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKEL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H+  LR H+R+P+V PQRI  EL + L E+     I  H NHP E  E    A+ +
Sbjct: 183 ENIPHLHTLRIHTRLPVVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L +A + LL+QSV+LK IND+  IL  L      + I PYYLH  D   G SHF L  E 
Sbjct: 243 LKHANVTLLNQSVVLKNINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDES 302

Query: 290 GQKIVASLKEKISGLCQP 307
              I   L+   SG   P
Sbjct: 303 AAAIYKELQRISSGYLVP 320


>gi|322831134|ref|YP_004211161.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602]
 gi|321166335|gb|ADW72034.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602]
          Length = 342

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 94/278 (33%), Positives = 150/278 (53%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P +P DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 63  MQPGDPQDPLLLQVLTAREEFIAAPGFTTDPL-DEQRSVVPGLLHKYSNRALLLVKGGCA 121

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  +   AL YI+ + ++ E+IF+GGDPL+     L  +
Sbjct: 122 VNCRYCFRRHFPYQDNQG---NKANWVQALDYIRTRPELDEIIFSGGDPLMAKDHELDWL 178

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           +  L  I H++ LR H+R+P+V P RI     Q L+++   V +  H NH  E +    A
Sbjct: 179 IGELEGIAHIKRLRIHTRLPVVIPARITDVFCQRLEKSRLQVLMVTHINHANEINNALRA 238

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           ++++L   G+ LL+QSVLL+G+ND  ++LA L     +  I PYY+H  D   G +HF +
Sbjct: 239 SMAKLKRHGVTLLNQSVLLRGVNDSADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 298

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +E + I+  L  K+SG   P    ++ G   K  +D
Sbjct: 299 NDDEARVIMKGLMSKVSGYMVPKLTREIGGEPSKTILD 336


>gi|156050603|ref|XP_001591263.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980]
 gi|154692289|gb|EDN92027.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 531

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 172/321 (53%), Gaps = 20/321 (6%)

Query: 19  LIKKEQIDEIKEISN--HYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEER 74
           + +++ I+++KE       SI L P I ++I+  NP +DPI RQFIP K  +L   P+  
Sbjct: 161 ITREDFIEDVKEGIKLAPMSIRLPPHILSIIDWENPFDDPIRRQFIPMKSSKLEDHPKVE 220

Query: 75  EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------ 128
            D + +++ SP++G VHRY D+ L      CP+YCRFC R   +G     V  +      
Sbjct: 221 LDSLHESDDSPVEGFVHRYYDKALFLATSQCPLYCRFCTRSWSIGPDMQNVKKTTFKPQR 280

Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
           K  E    YI++  Q+ +++ +GGD  IL+ + ++ + + L  I H++  RF ++   V 
Sbjct: 281 KRWEDIFTYIEDTPQLQDIVVSGGDCYILTAENIRLIGERLISIPHIKRFRFATKGLAVS 340

Query: 189 PQRI-------NPELIQC---LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           P RI         E+I+     K+AGK + I  H NHP E +  +  A+ RL    + + 
Sbjct: 341 PARILDDSDGWAAEMIRLSALAKKAGKSMAIHTHFNHPREMTWVSRMALQRLHENNVTVR 400

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKG+NDD   ++NL++T  +  I PYY++  D+       R  +    ++   ++
Sbjct: 401 NQTVLLKGVNDDVATMSNLIKTVADNNIIPYYVYQADMVQYVEDLRTPLSTILQLERHIR 460

Query: 299 EKISGLCQPFYILDLPGGYGK 319
             I G   P +++DLPGG GK
Sbjct: 461 GSIGGFVTPNFVVDLPGGGGK 481


>gi|152994930|ref|YP_001339765.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1]
 gi|150835854|gb|ABR69830.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1]
          Length = 340

 Score =  169 bits (427), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 147/269 (54%), Gaps = 2/269 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           N +DP+  Q +P   E+  +    +DP+ + +H+P K IVH+Y  R+L+     C V CR
Sbjct: 63  NVHDPLLLQVLPSLAEMQKVAGYTKDPLEEADHNPQKAIVHKYKRRLLVITTGTCAVNCR 122

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    +     L+  + ++ + Y+++  +I EVI +GGDPL++    L   ++ L 
Sbjct: 123 YCFRRHFPYADNQ--LAQAEWQSVIDYLKDHPEINEVILSGGDPLMMKDSLLADKVRKLE 180

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            +  ++ LR HSR+P+V P R+  ++++ +K +   + +  H NH  E  EE   A  +L
Sbjct: 181 ALPQIKRLRIHSRLPVVIPNRVCDDMLEWIKVSRLDIVMVWHINHANEMDEELANAAYKL 240

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            +AG+ LL+Q VLLKG+ND  E   NL        I PYY+   D   G +HF + IE+ 
Sbjct: 241 KSAGVTLLNQGVLLKGVNDSVEAQVNLSEAVFSAGILPYYMFTLDPVEGAAHFDIAIEDA 300

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319
           Q+++  +  ++ G   P    ++PG   K
Sbjct: 301 QELMGKVAAELPGYLVPRLAKEIPGKPAK 329


>gi|254482976|ref|ZP_05096212.1| KamA family protein [marine gamma proteobacterium HTCC2148]
 gi|214036848|gb|EEB77519.1| KamA family protein [marine gamma proteobacterium HTCC2148]
          Length = 346

 Score =  169 bits (427), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 150/273 (54%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK-GIVHRYPDRILLKLLHVCPVYC 109
           +P+DP+ RQ +    EL  +P   +DP+G+   S    G++ +Y  R LL L   C + C
Sbjct: 64  DPDDPLLRQVLSVSAELLQVPGFGDDPVGETGDSITHPGVIQKYHGRALLILSGGCAINC 123

Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           R+CFRR    ++     S ++   A+ +I +   I EVI +GGDPL++S ++L+ ++  L
Sbjct: 124 RYCFRRHFPYNENRN--SREEWLHAVRHIADDPSISEVILSGGDPLLVSDRQLKSLVGQL 181

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H+Q LR HSR+PIV P R+   L+  L        + +H+NH  E + E   A+ +
Sbjct: 182 AAIPHLQRLRVHSRLPIVLPSRVTAGLVNALTGTRLQSVLVVHSNHGNEINTEVKNALQK 241

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L++  I LL+Q+VLL GIND  + LA+L        + PYYLH  D   G +HF +T   
Sbjct: 242 LSSGKITLLNQAVLLAGINDTEDELADLSEQLFTAGVLPYYLHLLDRVRGAAHFEVTARR 301

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           G +++  L+ ++ G   P  + +  G   KV++
Sbjct: 302 GLELITQLENRLPGYLVPRLVREDAGELAKVRV 334


>gi|317148225|ref|XP_001822598.2| L-lysine 2,3-aminomutase [Aspergillus oryzae RIB40]
          Length = 453

 Score =  168 bits (426), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 158/302 (52%), Gaps = 18/302 (5%)

Query: 36  SIALTPVIANLINPHNP-NDPIARQFIPQKEELN-ILPEEREDPIGDNNHSPLKGIVHRY 93
           ++ LTP I +LIN     +DPI RQFIP         P+ + D + + + SP+KG+VHRY
Sbjct: 107 AVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRY 166

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS------SKDTEAALAYIQEKSQIWEV 147
           PD++L     VCPVYCRFC R   VG Q  TV         K  E    YI    ++ +V
Sbjct: 167 PDKVLFLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDV 226

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL---- 200
           + +GGD   L   +L+++  TL  I H++ +RF S+   V P RI   + E  + L    
Sbjct: 227 VVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRVLIEIS 286

Query: 201 ---KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
              +E GK + +  H NHP E S     A  +L +  + + +Q+VLL  +N++   +  L
Sbjct: 287 NRGREKGKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKRL 346

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
           +R   +  I+PYY++  D+  G    R  + +   I + ++  I+G   P +++DLPGG 
Sbjct: 347 IRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGGG 406

Query: 318 GK 319
           GK
Sbjct: 407 GK 408


>gi|269103626|ref|ZP_06156323.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268163524|gb|EEZ42020.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 340

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P ++E  +      DP+ + ++  + G++H+Y +R+L+ +   C + CR
Sbjct: 67  NPYDPLLRQVLPLEQEFEVHAGYSTDPLEEQDND-IPGLLHKYKNRVLMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YI    ++ EVI +GGDPL+     L  ++  +
Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQQSLDYIANHPELDEVILSGGDPLMAKDHELAWLMDGI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR HSR+P+V P R+ P+L Q    +   V +  H NH  E + E   A+  
Sbjct: 183 EQIPHIKRLRIHSRLPVVLPSRVTPDLCQRFASSRLQVILVTHINHCNEINAELTLAMQN 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L +A + LL+Q VLLKG+ND  + L NL     +  I PYYLH  D   G +HF +   +
Sbjct: 243 LKHANVTLLNQGVLLKGVNDSVQALINLSNRLFDAGILPYYLHVLDKVQGAAHFFVDDIQ 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            + ++A L E +SG   P    ++ G   K  +D H
Sbjct: 303 AKTLMAGLMENVSGYLVPQLTREIGGRSSKTPLDLH 338


>gi|56461377|ref|YP_156658.1| lysine 2,3-aminomutase [Idiomarina loihiensis L2TR]
 gi|56180387|gb|AAV83109.1| Probable lysine 2,3-aminomutase [Idiomarina loihiensis L2TR]
          Length = 348

 Score =  168 bits (426), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 140/272 (51%), Gaps = 3/272 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           + NDP+ RQ +P   E    P    DP+ +    P+ G++H+Y  R+LL L   C V CR
Sbjct: 67  DSNDPLLRQVLPLHNEFESEPGYSTDPLQEQ-QGPVNGLLHKYKSRVLLILQGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     +     S +     L YI++  +I EVI +GGDPL+   +RL+ ++    
Sbjct: 126 YCFRRHFPYDE--LTFSKRQLTETLEYIRQHPEINEVILSGGDPLMAKDERLKGLINEFE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            +  +  LR HSR+P+V P R+  +L + L  +     + +HANH  E S E   A+   
Sbjct: 184 LLPQLTRLRIHSRLPVVIPSRLTHKLKEVLSNSRLQSVLVLHANHANEISPELAGALDDW 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            +AGI LL+QSVLL G+ND+   L  L       R+ PYYLH  D   G SHF ++ E+ 
Sbjct: 244 HHAGIHLLNQSVLLSGVNDNLTALIELSEKLFSARVMPYYLHQLDKVEGASHFAVSDEKA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           Q +   +  ++ G   P  + +  G   K  I
Sbjct: 304 QALWQKMTHELPGFLVPRLVREEAGELSKTAI 335


>gi|323495128|ref|ZP_08100214.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546]
 gi|323310629|gb|EGA63807.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546]
          Length = 340

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 147/276 (53%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  EE  +      DP+ + N++ + G++H+Y +R L+ +   C + CR
Sbjct: 67  NPYDPLLRQVLPLSEEFEVHQGYSNDPLEEQNNA-IPGLLHKYRNRALMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L YIQ+  +I E+I +GGDPL+     L  ++  +
Sbjct: 126 YCFRRHFPYDENKG---SKSVWQTSLDYIQQHPEIDEIILSGGDPLMAKDDELSWLVARI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I+H++ LR HSR+P+V P RI  +L   L +    V +  H NH  E  +    A+ +
Sbjct: 183 ADIQHIKRLRIHSRLPVVIPARITEQLTDLLGQTRLQVILVTHINHAQEIDQTLANALDK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+Q V+LKG+ND       L     E  + PYY+H  D   G +HF ++ ++
Sbjct: 243 LKQVGVTLLNQGVMLKGVNDSVSSQIALSNALFEAGVLPYYMHVLDKVQGAAHFFISDQQ 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A + E+ SG   P    ++ G   K  +D H
Sbjct: 303 AKEIMAGVLEQTSGYLVPKLTREIGGRASKTPLDLH 338


>gi|126179733|ref|YP_001047698.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus
           marisnigri JR1]
 gi|125862527|gb|ABN57716.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1]
          Length = 386

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/292 (32%), Positives = 159/292 (54%), Gaps = 9/292 (3%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           I  E+   + E+++ ++        +LI+  +P DPI R  +P  EEL   P    DP  
Sbjct: 29  IDPEERARLAEVTDLFAFRANDYYLSLIDWDDPADPIRRLIVPTVEELE--PWGHLDPSS 86

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           ++ ++   G+ H+Y +  LL +  +C   CR+CFR+ +   +   V  +KD  A LAYI+
Sbjct: 87  EHRYTRAPGLQHKYRETALLLVSDLCGGLCRYCFRKRLFIEEAREV--NKDISAGLAYIR 144

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
           +  +I  V+ TGGDPL L   R+  +++ +R I+HV I+R  +++P  +P RI  +P L+
Sbjct: 145 DHPEITNVLLTGGDPLFLETGRVLDIVRQVREIEHVGIIRIGTKMPAYNPFRIINDPALL 204

Query: 198 QCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
             +++     K +YI    NHP E ++ A  A++ L  AG ++++Q+ L++GINDDPE+L
Sbjct: 205 DMIRDYSMDEKRIYIMAQFNHPRELTDAACRAVALLQEAGAVVMNQTPLIRGINDDPEVL 264

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           A L      +   PYY+     A G   F + +EE  +I    +   SGL +
Sbjct: 265 AALFDKLSFIGANPYYVFQCRPAIGNRTFAVPVEESYRIFEQARSICSGLAK 316


>gi|166711823|ref|ZP_02243030.1| hypothetical protein Xoryp_10295 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 342

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 139/267 (52%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+C
Sbjct: 75  HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 134

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    +++    +      A+A I     I EV+ +GGDPL L+  +L ++   L  I
Sbjct: 135 FRRHFPYAEESA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAI 192

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+PIV P+R++  L+  L+    PV   +HANH  EF      A+  L +
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDTAMHALRD 252

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
            G  LL+Q+VLL G+ND  + LA L        + PYYLH  D  AG +HF +     + 
Sbjct: 253 TGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVVPYYLHQLDRVAGVAHFEVDDARARA 312

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           +   L  ++SG   P  + ++PG  GK
Sbjct: 313 LHTELATRLSGYLVPRLVREIPGDTGK 339


>gi|95928491|ref|ZP_01311238.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
 gi|95135281|gb|EAT16933.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
          Length = 393

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 165/308 (53%), Gaps = 9/308 (2%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TS  +L     +  ++  +++ ++  + + +     +LI+P++ +DPI +  +P  EEL
Sbjct: 29  ITSVDELKAYLPLSYDEEADLRTVTEAHPMNIPRYYLSLIDPNDAHDPIRKLAVPAAEEL 88

Query: 68  NI---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            +   + E  +DP GD+ H    GI+H+Y    L+     C +YCR CFR+ MVG     
Sbjct: 89  VVAGAMGETTKDPYGDDKHDKGNGILHKYSYTALVVATEYCSMYCRHCFRKRMVGLPNHQ 148

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            +  ++   A  YI    +I  V+ +GGDPL+L    ++K+L  L  I H+  +R  SR 
Sbjct: 149 TV--ENFHNAAKYIAAHPEITNVVISGGDPLLLPTHVIRKMLAALEDIPHLNFVRIGSRA 206

Query: 185 PIVDPQRI-NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           P+V P R  + ELI  L++ G  K + +  H NHP E + EA  AI R+  AG+ + +Q+
Sbjct: 207 PVVYPIRFADDELIDVLRDFGRKKTLQMPTHFNHPVELTSEAAEAIRRVREAGVTVNNQA 266

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEK 300
           V L G+NDD E L  LM   + + + PYYL+    +A    HF++ ++ G  IV   + +
Sbjct: 267 VFLSGVNDDVETLTELMNGLLRIGVNPYYLYQCMPVARVRHHFQVPLKRGVDIVDEARRR 326

Query: 301 ISGLCQPF 308
           + G  + F
Sbjct: 327 MDGYAKRF 334


>gi|209696199|ref|YP_002264129.1| hypothetical protein VSAL_I2793 [Aliivibrio salmonicida LFI1238]
 gi|208010152|emb|CAQ80477.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 340

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 148/277 (53%), Gaps = 7/277 (2%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           NP DP+ RQ +P  +E  +      DP+ + +N  P  G++H+Y +R+LL L   C V C
Sbjct: 67  NPFDPLLRQVLPLDQEFEVHDGYSTDPLDEQDNEQP--GLLHKYKNRVLLILKGGCAVNC 124

Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           R+CFRR       KG        + ++ YI    ++ EVI +GGDPL+     L+ +++ 
Sbjct: 125 RYCFRRHFPYEDNKG---GKSVWQNSINYIAAHPELNEVILSGGDPLMAKDHELEWLIQH 181

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
           L  + H++ LR HSR+P+V P RI   L +   E    V +  H NH  E S      ++
Sbjct: 182 LDKVPHIKRLRIHSRLPVVIPNRITDTLCRLFAETRLQVILVTHINHANEISPYFTDKMT 241

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
           +L  A + LL+QSVLLKGIND  + L NL     +  I PYYLH  D   G +HF ++ E
Sbjct: 242 QLKQANVTLLNQSVLLKGINDTSKALTNLSEALFDAGILPYYLHVLDKVQGAAHFFVSDE 301

Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           + ++++A L E +SG   P    ++ G   K  +D +
Sbjct: 302 KAKELMAELIENVSGYLVPTLAREIGGRKSKTPLDLY 338


>gi|85711842|ref|ZP_01042897.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145]
 gi|85694239|gb|EAQ32182.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145]
          Length = 340

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 150/297 (50%), Gaps = 6/297 (2%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGD----NNHSP 85
           E    +S  +      L+   NP DP+ RQ +P  +E  + P    DP+ +      H+ 
Sbjct: 42  EAKKLFSFRVPRPFVELMEAGNPQDPLLRQVLPLADEFTVTPGYSTDPLNEVTDKREHAV 101

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
            +G++H+Y  R+LL +   C + CR+CFRR    +    VL  K  +  + Y+++  ++ 
Sbjct: 102 PQGLLHKYASRVLLLVQGACAINCRYCFRRHYPYADD--VLPRKQFDECVEYVRQNQEVN 159

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           EVI +GGDPL  +   L ++   L  +K ++ LR HSR+P+V PQR+   L   L +  +
Sbjct: 160 EVILSGGDPLFANDGYLIELADKLAELKQIKRLRIHSRLPVVLPQRLTERLATHLTQRFE 219

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
            V + IHANH  E        ++     G+ LL+QSVLLK INDD + L+ L     +  
Sbjct: 220 QVILVIHANHANEIGSSLKQHLATWRQRGVTLLNQSVLLKAINDDADSLSQLSERLFDAS 279

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           + PYYLH  D   G +HF ++    +++   +  ++ G   P  + ++P    K  I
Sbjct: 280 VLPYYLHQLDPVQGAAHFAISDARARELWQQINARLPGFLVPKLVREIPNRDSKTPI 336


>gi|167469180|ref|ZP_02333884.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           FV-1]
          Length = 315

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/262 (35%), Positives = 144/262 (54%), Gaps = 5/262 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P N +DP+  Q +  +EE    P    DP+ D   S + G++H+Y +R LL +   C 
Sbjct: 55  MQPGNASDPLLLQVLTAREEFITAPGFTHDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113

Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           V CR+CFRR       +G   +  +   AL YI++  ++ E+IF+GGDPL+     L  +
Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWL 170

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  L  IKH++ LR H+R+P+V P RI   L Q L  +   V +  H NH  E       
Sbjct: 171 LDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRD 230

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           +++RL  AG+ LL+QSVLL+G+N+D ++LA L     +  I PYY+H  D   G +HF +
Sbjct: 231 SMARLKQAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290

Query: 286 TIEEGQKIVASLKEKISGLCQP 307
             +E  +++  L  ++SG   P
Sbjct: 291 DDDEAGQLMKGLLSRVSGYLVP 312


>gi|307352679|ref|YP_003893730.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
           petrolearius DSM 11571]
 gi|307155912|gb|ADN35292.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
           petrolearius DSM 11571]
          Length = 368

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/294 (32%), Positives = 154/294 (52%), Gaps = 8/294 (2%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           + +E+  ++ E+   ++        +LI+ ++P DPI +  IP   EL      R D  G
Sbjct: 16  LSEEEKKKLAEVQEMFAFRSNEYYLSLIDWNDPADPIRKLVIPDPAELEEWG--RLDASG 73

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +  +    G+ H+Y    L+ +  +C  +CR+CFR+ +     G    ++D +  L YI 
Sbjct: 74  EARYIVAPGMEHKYDQTALVLVSDMCAGFCRYCFRKRIF-MNGGAREVARDIDVDLEYIS 132

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----P 194
              +I  V+ +GGDPL LS  RL+K++  +R I HVQI+R  ++VP  +P RI      P
Sbjct: 133 SHPEITNVLLSGGDPLFLSTNRLEKIIAWIREIDHVQIVRIGTKVPAYNPYRILNDTKLP 192

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           E+I+      K +YI    NHP E +E+AI A++ L  +G +  +Q+ LL GIND+PE +
Sbjct: 193 EIIRRYSTEEKKIYIVTQFNHPRELTEQAIKAVNILQESGAVFANQTPLLHGINDNPETM 252

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           A L R    + I PYY+       G   F + +E+G  I+   K   SGL + F
Sbjct: 253 AELSRKLSFIGITPYYVFQCRPTLGNRDFVVPVEDGYFILEQAKMNCSGLAKRF 306


>gi|118602356|ref|YP_903571.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567295|gb|ABL02100.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 315

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/282 (35%), Positives = 151/282 (53%), Gaps = 17/282 (6%)

Query: 43  IANLINPHNPNDPIARQFIPQK-----EELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
            A LI+  N NDP+ RQ I  K     E  ++LP E E       +SP+ G++H+YP+R+
Sbjct: 42  FAQLIDKSNKNDPLLRQVISSKVLSKSENFSLLPLEEE------KYSPVAGLIHKYPNRV 95

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           LL    VC ++C++CFR+    S+   + +  + +    YI    +I EVI +GGD L L
Sbjct: 96  LLITSQVCAIHCQYCFRQNFNYSEHDAISNWNEVQN---YIVNDVKINEVILSGGDLLSL 152

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
           S  +L  ++  +  I H++ LR H+R  +V P RI  +L   L ++   V I +H NH  
Sbjct: 153 SDDKLSILIDNIANIAHIKTLRIHTRSIVVMPSRITDKLADTLNQSRLNVVIVLHTNHAQ 212

Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
           E S +    I++L  +G+ LL+QSVLLKG+ND  +IL  L     +L I PYYLH  D  
Sbjct: 213 ELSVKFAQKITKL--SGVTLLNQSVLLKGVNDSIKILTELCLKLFDLGILPYYLHMLDKV 270

Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
            G   F +  ++  ++   LK  +SG   P  + D  G + K
Sbjct: 271 QGAQDFLVKDDDAIQLHQQLKNNLSGYLVPKLVRD-NGNHSK 311


>gi|254516177|ref|ZP_05128237.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
           NOR5-3]
 gi|219675899|gb|EED32265.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
           NOR5-3]
          Length = 345

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 150/283 (53%), Gaps = 3/283 (1%)

Query: 42  VIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLK 100
             A  I   N  DP+ RQ +  ++E  I+    +DP+ + + ++   G++ +Y  R LL 
Sbjct: 58  AFAARIERGNVADPLLRQILAAQDETRIVTGYSKDPLAETSLYAGTPGLLQKYTGRALLV 117

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
           +   C + CR+CFRR+   +      SS +  A +  + +   I E+I +GGDPL+L  +
Sbjct: 118 VTGQCAINCRYCFRRDYPYADNAQ--SSAERLATIDRLLDDPSIGEIILSGGDPLLLPDE 175

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
           ++  + + +   +    LR H+R+P+V P+R+   LIQ L E G P  + +H+NHP E  
Sbjct: 176 QIAAMARRIARHQRSVTLRIHTRLPMVIPERVTDSLIQALSERGLPSVMVLHSNHPNEID 235

Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
                AI  L  AG  +L+QSVLL G+ND PE+LA+L          PYY+H  D  AG 
Sbjct: 236 APTAHAIKSLREAGTTVLNQSVLLAGVNDKPEVLAHLSDRLFAAGALPYYIHMLDKVAGA 295

Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +HF ++ +  ++I+  L     G   P  +++ PG   K +++
Sbjct: 296 AHFEVSEDSARRIMGELSGMRPGYLVPRLVIERPGAGSKQQLE 338


>gi|325926499|ref|ZP_08187819.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118]
 gi|325543148|gb|EGD14591.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118]
          Length = 342

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 140/267 (52%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+C
Sbjct: 75  HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYC 134

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    +++    +      A+  I     I EV+ +GGDPL L+  +L ++   L  I
Sbjct: 135 FRRHFPYAEETA--ARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAI 192

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+PIV P+R++  L   L+    PV   +HANH  EF     AA+  L +
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRD 252

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
            G  LL+Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF +     + 
Sbjct: 253 TGAHLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           + A L  ++SG   P  + ++PG  GK
Sbjct: 313 LHAELAARLSGYLVPRLVREIPGDTGK 339


>gi|78048134|ref|YP_364309.1| putative radical SAM superfamily protein [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
 gi|78036564|emb|CAJ24255.1| putative radical SAM superfamily protein [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
          Length = 342

 Score =  167 bits (424), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 140/267 (52%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+C
Sbjct: 75  HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYC 134

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    +++    +      A+  I     I EV+ +GGDPL L+  +L ++   L  I
Sbjct: 135 FRRHFPYAEETA--ARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAI 192

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+PIV P+R++  L   L+    PV   +HANH  EF     AA+  L +
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRD 252

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
            G  LL+Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF +     + 
Sbjct: 253 TGAHLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           + A L  ++SG   P  + ++PG  GK
Sbjct: 313 LHAELAARLSGYLVPRLVREIPGDTGK 339


>gi|21243115|ref|NP_642697.1| hypothetical protein XAC2381 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108633|gb|AAM37233.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 342

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 137/267 (51%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E+   P    D +GD       G++ +Y  R LL     C  +CR+C
Sbjct: 75  HDPLLRQVLPLDAEMQPAPGFGLDAVGDGAARTAAGVIQKYRGRALLIATGSCAAHCRYC 134

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    +++    +      A+A I     I EV+ +GGDPL L+  +L ++   L  +
Sbjct: 135 FRRHFPYAEETA--ARDGWRDAVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAV 192

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+PIV P+R++  L   L+    PV   +HANH  EF     AA   L  
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLRE 252

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
            G  LL+Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF +     + 
Sbjct: 253 TGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           + A L  ++SG   P  + ++PG  GK
Sbjct: 313 LHAELAARLSGYLVPRLVREIPGDTGK 339


>gi|152979756|ref|YP_001345385.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus
           succinogenes 130Z]
 gi|150841479|gb|ABR75450.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus
           succinogenes 130Z]
          Length = 340

 Score =  167 bits (423), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 136/257 (52%), Gaps = 3/257 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+  Q +   +E        +DP+ +    P   I+H+Y +R+L  + + C V CR
Sbjct: 70  NPQDPLLLQVMLSHQEFLYAEGFNKDPL-EEQKMPAPNILHKYHNRLLFMVKNACAVNCR 128

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    +Q     +  +   A+ YI E  QI EVIF+GGDPL+     L  ++K L 
Sbjct: 129 YCFRRHFPYNQSQG--NKANWRQAIEYIAENPQIEEVIFSGGDPLMAKDHELDWLIKQLE 186

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H+Q LR HSR+P++ PQRI   L + L+ +     +  H NHP E  +    A+ RL
Sbjct: 187 TIPHLQRLRIHSRLPVMIPQRITSALCRMLQNSRLKAVLVTHINHPNEIDDVLAQAMVRL 246

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             A + LL+QSVLLK +ND+  +L  L     E+ I PYYLH  D   G +HF ++ E  
Sbjct: 247 KQARVELLNQSVLLKNVNDNAAVLKTLSDNLFEIGILPYYLHLLDKVEGAAHFYVSDESA 306

Query: 291 QKIVASLKEKISGLCQP 307
            KI   L+   SG   P
Sbjct: 307 VKIYRDLQATTSGYLVP 323


>gi|260774695|ref|ZP_05883599.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609351|gb|EEX35502.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 340

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 150/276 (54%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  EE ++      DP+ D   + + G++H+Y +R L+ +   C + CR
Sbjct: 67  NPFDPLLRQVLPLSEEFDVHSGYSTDPL-DEQDNQVPGLLHKYRNRALMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +      +L Y+++  ++ E+I +GGDPL+   + LQ ++  +
Sbjct: 126 YCFRRHFPYNENKG---NKSVWSQSLDYVRQHPELNEIILSGGDPLMAKDEELQWLIGQI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I+H++ LR HSR+P+V P RI     + L      V +  H NH  E ++E   A+S 
Sbjct: 183 ADIQHIKRLRIHSRLPVVIPARITTTFTKLLAGTRLQVILVTHINHANEINQELRDALSS 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+Q V+LKG+ND  E    L  +  +  + PYY+H  D   G +HF ++ ++
Sbjct: 243 LRREGVTLLNQGVMLKGVNDSVEAQVALSESLFDAGVLPYYIHVLDKVQGAAHFFISDQQ 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++I+A + E++SG   P    ++ G   K  +D H
Sbjct: 303 AKQIMAGVIERVSGYLVPKLTREIGGRASKTPLDLH 338


>gi|90413354|ref|ZP_01221347.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK]
 gi|90325596|gb|EAS42065.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK]
          Length = 340

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 145/276 (52%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P + E  +      DP+ + +++ + G++H+Y +R L+ +   C V CR
Sbjct: 67  NPYDPLLRQILPLEPEFEVHDGYSLDPLEEQDNA-IPGLLHKYKNRALMIVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG        + AL YI E  ++ EVI +GGDPL+     L  ++  +
Sbjct: 126 YCFRRHFPYNDNKG---GKAQWKVALTYIAEHPELNEVILSGGDPLMAKDHELAWLVDEI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR H+R+P+V P RI  EL   +  +     +  H NH  E ++E   A+++
Sbjct: 183 ESISHIKRLRIHTRLPVVIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L      LL+Q VLL+GIND  + L +L        I+PYYLH  D   G +HF +   E
Sbjct: 243 LKRVNATLLNQGVLLRGINDSVDALTSLSEALFTAGIQPYYLHVLDKVQGATHFMVDDTE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++++A L + +SG   P    ++ G   K  +D H
Sbjct: 303 ARQLMAGLMQNVSGYMVPKLTREIGGRASKTPLDLH 338


>gi|238502959|ref|XP_002382713.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357]
 gi|220691523|gb|EED47871.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357]
          Length = 593

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 155/292 (53%), Gaps = 9/292 (3%)

Query: 36  SIALTPVIANLINPHNP-NDPIARQFIPQKEELN-ILPEEREDPIGDNNHSPLKGIVHRY 93
           ++ LTP I +LIN     +DPI RQFIP         P+ + D + + + SP+KG+VHRY
Sbjct: 216 AVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRY 275

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS------SKDTEAALAYIQEKSQIWEV 147
           PD++L     VCPVYCRFC R   VG Q  TV         K  E    YI    ++ +V
Sbjct: 276 PDKVLFLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDV 335

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           + +GGD   L   +L+++  TL  I H++ +RF S+   V P RI     +  ++ GK +
Sbjct: 336 VVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRK-GKNI 394

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
            +  H NHP E S     A  +L +  + + +Q+VLL  +N++   +  L+R   +  I+
Sbjct: 395 ALHTHFNHPQEISWITEHAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKRLIRKLADNNIQ 454

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
           PYY++  D+  G    R  + +   I + ++  I+G   P +++DLPGG GK
Sbjct: 455 PYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGGGGK 506


>gi|153834930|ref|ZP_01987597.1| lysine 2;3-aminomutase [Vibrio harveyi HY01]
 gi|148868610|gb|EDL67696.1| lysine 2;3-aminomutase [Vibrio harveyi HY01]
          Length = 340

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 149/275 (54%), Gaps = 3/275 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  EE  +      DP+ + ++  L G++H+Y +R L+ +   C V CR
Sbjct: 67  NPYDPLLRQVLPLSEEFEVHEGYSNDPLEEQDNE-LPGLLHKYRNRALMIVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     +  +    +     L Y+ ++ ++ EVIF+GGDPL+     +  +L+ + 
Sbjct: 126 YCFRRHFPYQENKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+P+V P RI  EL Q L+ +   + +  H NH  E + E  A +++L
Sbjct: 184 QIPHIKRLRIHSRLPVVIPARITDELCQLLRASRLQIVLVTHINHANEINAEFAAQMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+Q+VLLK +N+  E    L     +  I PYYLH  D   G +H+ ++ EE 
Sbjct: 244 KQAGVTLLNQAVLLKNVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           + I+  +  ++SG   P    ++ G   K  +D H
Sbjct: 304 KAIMRGVITQVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|54310450|ref|YP_131470.1| hypothetical protein PBPRA3383 [Photobacterium profundum SS9]
 gi|46914891|emb|CAG21668.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 357

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 145/276 (52%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P + E  +      DP+ + +++ + G++H+Y +R L+ +   C V CR
Sbjct: 84  NPYDPLLRQVLPLEPEFEVHDGYSLDPLKEQDNA-IPGLLHKYKNRALMIVKGGCAVNCR 142

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG        + AL YI E  ++ EVI +GGDPL+     L  ++  +
Sbjct: 143 YCFRRHFPYSDNKG---GKTQWKKALNYIAEHPELNEVILSGGDPLMAKDHELAWLVDEI 199

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H++ LR H+R+P+V P RI  EL   +  +     +  H NH  E ++E   A+++
Sbjct: 200 ESIPHIKRLRIHTRLPVVIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTK 259

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L    + LL+Q VLL+GIND  E L  L  +     I+PYYLH  D   G +HF +   E
Sbjct: 260 LKRVNVTLLNQGVLLRGINDSVEALTALSESLFTAGIQPYYLHVLDKVQGAAHFMIDDTE 319

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            + ++A L + +SG   P    ++ G   K  +D H
Sbjct: 320 ARHLMAGLMQNVSGYMVPKLTREIGGRTSKTPLDLH 355


>gi|94676743|ref|YP_589018.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|94219893|gb|ABF14052.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
          Length = 339

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 145/270 (53%), Gaps = 2/270 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P DP+ RQ +   EE     +  +DPI +  ++    ++H+Y +R +L +   C + CR
Sbjct: 67  DPTDPLLRQVLTLPEEFKQHLDFSKDPINEQQYNVAPMLLHKYYNRAILLVKSGCAINCR 126

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR        +  +  + + A+ YI++ S++ E+I +GGDPL+     L K+L  L 
Sbjct: 127 YCFRRYFPYQDNQS--NQANWKLAIEYIKQHSELNEIILSGGDPLMAKDHELDKLLNLLE 184

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H+  LR HSR+ IV P RI   + Q L  +   V +  H NH  E       +I++L
Sbjct: 185 DIPHLTKLRIHSRLLIVIPARITSFICQRLARSRLKVVLVTHINHAQEIDSSVQKSIAKL 244

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            N  + LL+QSVLL+GIND+ +ILA L  T   + I PYYLH  D   G +HF +  +  
Sbjct: 245 RNKQVTLLNQSVLLRGINDNAQILATLSETLFSIGILPYYLHTLDCVQGATHFIVDDQRA 304

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           +KI+  L  K++G   P  + D+ G   K 
Sbjct: 305 RKIMHDLLSKVAGYLVPRLVRDISGMPSKT 334


>gi|262376096|ref|ZP_06069327.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145]
 gi|262309190|gb|EEY90322.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145]
          Length = 340

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 145/272 (53%), Gaps = 2/272 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+  Q +P   EL   P    DP+G+   +   G++H+Y  R LL L   C V+CR
Sbjct: 63  NPLDPLLLQVLPHHLELEEHPGFVTDPLGEEQANQQPGVLHKYKSRFLLTLTGACAVHCR 122

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR      +  +  ++D      Y++ +  I EVI +GGDPL LS+++L+  ++ L 
Sbjct: 123 YCFRRHF--PYQENLPKNEDWINIKQYLESQPDINEVILSGGDPLTLSNRKLKTWIERLE 180

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            + H++ LR HSRVPIV P R++ EL+  LK +   + + +H+NH  E  +     +++L
Sbjct: 181 SVPHLKFLRIHSRVPIVIPNRVDEELLSMLKNSRLRIILVVHSNHASELDDFTCKRLNQL 240

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
               I +L+Q+VLL G+ND  ++L +L     +  + PYYLH  D   G  HF L  +  
Sbjct: 241 VQQQITVLNQAVLLNGVNDSAQVLVDLSYRLFDAGVMPYYLHVLDKVKGAHHFDLAPDHI 300

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            +I   +   + G   P  + ++ G   K  +
Sbjct: 301 NEIYTEVLANLPGYLVPKLVREIAGEKNKTPL 332


>gi|303328383|ref|ZP_07358821.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3]
 gi|302861713|gb|EFL84649.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3]
          Length = 378

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 104/343 (30%), Positives = 184/343 (53%), Gaps = 16/343 (4%)

Query: 5   HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
           ++ +T+A+ L      ++E +++++ IS  +  ++ P   +LI+P +P+DPI +  +P  
Sbjct: 3   NENMTTAEQLQKHIFFREEHLEQLQRISKRFPFSIPPYYLSLIDPSDPHDPIRKMCVPAL 62

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           +EL+  P  R D  G+ +++ L G+ H+Y    L+   + C +YCR CFR+ +VG +   
Sbjct: 63  DELD--PGGRLDTSGEASNTVLTGLQHKYRQTALVLSTNACAMYCRHCFRKRLVGLEGRE 120

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
               +D    LAYI++  +I  V+ +GGD L+     L + L+ L  ++H+ ++R  SR 
Sbjct: 121 TRPRRDK--VLAYIRKHHEISNVLLSGGDALLNPTPVLHEYLEELSGMEHLDVVRICSRT 178

Query: 185 PIVDPQRI--NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           P+V P RI  + +L+   KE G  K + +    NHP E S +A  A+  L   G+++ +Q
Sbjct: 179 PVVLPMRIYMDQKLLDLFKEYGAQKHLCLVTQFNHPRELSPQAQRALDALQECGVMVRNQ 238

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKE 299
           +VLL G+ND    L  L++  V   + PYY+       G  ++F++ I +   IV   K+
Sbjct: 239 TVLLHGVNDHGPTLGKLLKELVRRGVVPYYVFQCRPVTGVKNNFQVPIAQAYAIVEEAKQ 298

Query: 300 KISGLCQPF-YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
             +GL + F Y+L      GK++I    +  VGNG +    H 
Sbjct: 299 MQNGLGKAFRYVLSHE--TGKIEI----LGPVGNGRWLFKYHQ 335


>gi|15601964|ref|NP_245036.1| hypothetical protein PM0099 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720310|gb|AAK02183.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 337

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 137/258 (53%), Gaps = 5/258 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+  Q +  ++E   +    +DP+ + + + +  ++H+Y +R+LL +   C V CR
Sbjct: 67  NPQDPLFLQVMSFRDEFLQVEGFSKDPLEEQD-AVVPSVLHKYHNRLLLMVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +  + + AL YI    +I EVIF+GGDPL+     L  ++K L
Sbjct: 126 YCFRRHFPYADNKG---NKANWQKALDYIANHPEIEEVIFSGGDPLMAKDHELDWLIKNL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H+Q LR H+R+P+V PQRI  +  Q L E+     +  H NHP E       AI++
Sbjct: 183 ENIPHLQRLRIHTRLPVVIPQRITADFCQTLAESRFQTVLVTHINHPNEIDAFFAQAINK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G++LL+Q+VLLKGIND+  IL  L        I PYYLH  D   G SHF L    
Sbjct: 243 LREVGVLLLNQAVLLKGINDNAHILKQLGDKLFATNILPYYLHLLDKVEGASHFYLDDSR 302

Query: 290 GQKIVASLKEKISGLCQP 307
              I   L+   SG   P
Sbjct: 303 ALNIYKELQSLTSGYLVP 320


>gi|148976876|ref|ZP_01813531.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3]
 gi|145963750|gb|EDK29010.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3]
          Length = 340

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +P  EE  +      DP+ + +++ + G++H+Y +R L+ +   C V CR
Sbjct: 67  NPHDPLLRQVLPLSEEFEVHEGYSADPLEEQDNA-IPGLLHKYKNRALMIVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L Y+ + S+I EVI +GGDPL+     ++ ++  +
Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQTSLDYVAQHSEINEVILSGGDPLMAKDSEIEWLIHAI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I HV+ +R HSR+P+V P RI  EL Q L +    V +  H NH  E + E   A+ +
Sbjct: 183 EQIPHVETVRIHSRLPVVIPARITDELCQTLSKTRLNVVMVSHINHANEINVELKQALLK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  +G  LL+Q V+LKG+N+    L  L     +  I PYY+H  D   G +HF ++ EE
Sbjct: 243 LKFSGATLLNQGVMLKGVNNSANSLKELSEKLFDAGILPYYMHVLDKVQGAAHFYISDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            +     L  ++SG   P    ++ G   K  +D H
Sbjct: 303 AKHHFKGLISEVSGYLVPKLTREIGGRSSKTPLDLH 338


>gi|261492016|ref|ZP_05988591.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494571|ref|ZP_05991053.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309762|gb|EEY10983.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312299|gb|EEY13427.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 330

 Score =  166 bits (420), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/277 (35%), Positives = 145/277 (52%), Gaps = 11/277 (3%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +  + A  +   NPNDP+  Q +  + E         DP+ +   SP   I+H+Y 
Sbjct: 45  FALRVPRMFAEKMEKGNPNDPLFLQAMSLQAEFIEAEGFVVDPL-EEQQSPAPNILHKYH 103

Query: 95  DRILLKLLHVCPVYCRFCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           +R+L  L + C + CR+CFRR    E V S K         +  L YI E  ++ EVI +
Sbjct: 104 NRLLFMLKNSCAINCRYCFRRHFPYEEVKSGKAV------WQQGLTYIAEHPELEEVILS 157

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+   + L  +L  L  I H++ LR HSR+P+V P RI  EL + L ++   V + 
Sbjct: 158 GGDPLMAKDQDLDWILTQLEQISHIKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLV 217

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
            H NH  E        +++L  AG++LL+QSV+LKG+ND+ + L  L     E  I PYY
Sbjct: 218 THINHANEIDAVFANKMAQLKKAGVVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPYY 277

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           LH  D  AG SHF +  E+  +I   L+   SG   P
Sbjct: 278 LHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYLVP 314


>gi|188576188|ref|YP_001913117.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520640|gb|ACD58585.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 313

 Score =  166 bits (420), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 138/267 (51%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+C
Sbjct: 46  HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 105

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    +++    +      A+A I     I EV+ +GGDPL L+  +L ++   L  I
Sbjct: 106 FRRHFPYAEETA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAI 163

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+PIV P+R++  L+  L+    P    +HANH  EF      A+  L +
Sbjct: 164 PHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRD 223

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
            G  LL+Q+VLL G+ND  + LA L        + PYYLH  D  AG +HF +     + 
Sbjct: 224 TGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 283

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           +   L  ++SG   P  + ++PG  GK
Sbjct: 284 LHTELATRLSGYLVPRLVREIPGDTGK 310


>gi|254362093|ref|ZP_04978215.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213]
 gi|153093652|gb|EDN74611.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213]
          Length = 330

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/277 (35%), Positives = 145/277 (52%), Gaps = 11/277 (3%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +  + A  +   NPNDP+  Q +  + E         DP+ +   SP   I+H+Y 
Sbjct: 45  FALRVPRMFAEKMEKGNPNDPLFLQAMSLQAEFIEAEGFVVDPL-EEQQSPAPNILHKYH 103

Query: 95  DRILLKLLHVCPVYCRFCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           +R+L  L + C + CR+CFRR    E V S K         +  L YI E  ++ EVI +
Sbjct: 104 NRLLFMLKNSCAINCRYCFRRHFPYEEVKSGKAV------WQQGLTYIAEHPELEEVILS 157

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+   + L  +L  L  I H++ LR HSR+P+V P RI  EL + L ++   V + 
Sbjct: 158 GGDPLMAKDQDLDWILTQLEQISHIKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLV 217

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
            H NH  E        +++L  AG++LL+QSV+LKG+ND+ + L  L     E  I PYY
Sbjct: 218 THINHANEIDAVFANKMAQLKKAGVVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPYY 277

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           LH  D  AG SHF +  E+  +I   L+   SG   P
Sbjct: 278 LHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYLVP 314


>gi|253576596|ref|ZP_04853924.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844010|gb|EES72030.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 389

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 97/315 (30%), Positives = 168/315 (53%), Gaps = 10/315 (3%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
           D+   + + +++  E+K I++ +   +     NLI+ ++P DPI +  IP   EL     
Sbjct: 9   DIAKVSQLSEQERQELKPITDKFVFRVNDYYLNLIDWNDPEDPIRKLVIPNTGELK--EY 66

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
            R D   +  +  + G  H+Y    LL +  VC  YCR+CFR+ +  +     ++  D  
Sbjct: 67  GRWDASDEAANYVVPGCQHKYRTTALLIVSEVCGSYCRYCFRKRLFRNDVKEAMA--DVT 124

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
             + YI +  +I  ++ TGGD LIL+ K+L+ +L+ LR I+HV+I+R  S++P+ +P RI
Sbjct: 125 PGIEYIAQHPEINNILLTGGDSLILATKKLRSILERLRAIEHVKIIRLGSKIPVFNPMRI 184

Query: 193 --NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
             +PEL+  ++E     + +Y+  H NHP E + EA      L +AG I+++Q+ +LKGI
Sbjct: 185 YEDPELLDLIREFSTVDQRIYVMAHINHPREITPEAKRGFQALHDAGAIVVNQTPILKGI 244

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           NDD  +L  L+       + PYY       AG + F + ++   ++V   K + SGL + 
Sbjct: 245 NDDAAVLGELLDRLSWAGVTPYYFFINRPVAGNADFVIPLKRAYQLVEEAKARTSGLGKR 304

Query: 308 FYILDLPGGYGKVKI 322
              L +    GK++I
Sbjct: 305 VR-LSMSHSSGKIEI 318


>gi|261345001|ref|ZP_05972645.1| KamA family protein [Providencia rustigianii DSM 4541]
 gi|282567147|gb|EFB72682.1| KamA family protein [Providencia rustigianii DSM 4541]
          Length = 342

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 150/274 (54%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P+DP+  Q +  K E +I P    DP+ + ++  +  ++H+Y +R L+ +   C V CR
Sbjct: 67  DPSDPLLLQVLTAKTEFDIHPGFSTDPLEEQDNE-IPSLLHKYHNRALMLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +  +   A+ YI+  S++ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYEDNKG---NKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H+  LR HSR+P+V P+RI   L + L+++   V +  H NH  E  +    A+ +
Sbjct: 183 EDIPHITRLRIHSRLPVVIPERITNTLCKRLEQSRLHVIMVTHVNHANEIDDSFTHAMQK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+ +ND+   LANL     E  I PYYLH  D   G +HF ++  E
Sbjct: 243 LKRAGVTLLNQSVLLRQVNDNVTALANLSNALFEAGILPYYLHVLDKVQGAAHFLVSDNE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++++  L  K+SG   P    ++ G   K  +D
Sbjct: 303 ARELIRELLSKVSGYLVPKLAREIGGEPSKTLLD 336


>gi|290476545|ref|YP_003469450.1| putative aminomutase [Xenorhabdus bovienii SS-2004]
 gi|289175883|emb|CBJ82686.1| putative aminomutase [Xenorhabdus bovienii SS-2004]
          Length = 343

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 5/300 (1%)

Query: 25  IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
           + E  E    + + +    A  +   +P+DP+  Q +  +EE    P    DP+ +  HS
Sbjct: 41  LKEGNEAKRLFPLRVPRAFAARMKKGDPHDPLLLQVLTAQEEFETHPGFSTDPL-EEQHS 99

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQ 143
            + G++H+Y +R LL +   C V CR+CFRR       KG   +  + + AL YI++  +
Sbjct: 100 AVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYEDNKG---NKNNWQLALDYIEQHPE 156

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           + E+IF+GGDPL+     L  ++  L  I H++ LR H+R+P+V P RI   L    +++
Sbjct: 157 LDEIIFSGGDPLMAKDHELDWLMTRLESISHIKRLRIHTRLPVVIPDRITLSLCNRFEKS 216

Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
              + +  H NH  E        +  L  AG+ LL+QSVLL+ +ND  + LA+L  T  +
Sbjct: 217 QLQIIMVTHINHANEIDNTFRDKMMWLKQAGVTLLNQSVLLRNVNDSADTLADLSNTLFD 276

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             I PYY+H  D   G +HF +  EE + I+  L  KISG   P    ++ G   K  +D
Sbjct: 277 AGILPYYIHILDKVQGAAHFLVGDEEAKAIMRELLTKISGYLVPCLAREIGGEPSKTPLD 336


>gi|320591241|gb|EFX03680.1| L-lysine-aminomutase [Grosmannia clavigera kw1407]
          Length = 487

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 164/314 (52%), Gaps = 22/314 (7%)

Query: 26  DEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDN 81
           D + ++ +    A  P + + IN  +P NDPI RQF+P K  +  +P+  +   D + ++
Sbjct: 124 DLVADVMDGIKAATMPYVLSRINWKDPRNDPIFRQFLPVKSRM--IPDHPKLTLDSLHES 181

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDT----EAAL 135
             SP+ G+V+RYP++ L     VCP YC FC R   VG    +V   S K T    E   
Sbjct: 182 ADSPVSGLVYRYPEKALFLPTSVCPTYCMFCTRSYAVGGNTESVKKASMKPTKRRWEEVF 241

Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--- 192
           AYI+ +  + +++ +GGD   L+  +L  V + L  + +++  RF S+   V P RI   
Sbjct: 242 AYIESQPALQDIVVSGGDAYYLTPDQLAYVGERLIAMPNIRRFRFASKGVAVAPARILDA 301

Query: 193 NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
                  L       ++AGK + +  H NHP E S     A  +L+ AGI++ +Q+VLL+
Sbjct: 302 EDSWFDALSYVATQARKAGKAMALHTHFNHPNEISWVTEQAARKLSEAGIMVRNQTVLLR 361

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDD   ++ L+R   +  I PYY++  D+     H R  ++    I A ++  I+G  
Sbjct: 362 GVNDDVATMSTLIRKLADNIIFPYYVYQCDMVEKVEHLRTPLQTILDIEAQIRGSIAGFM 421

Query: 306 QPFYILDLPGGYGK 319
            P +++DLPGG GK
Sbjct: 422 MPQFVVDLPGGGGK 435


>gi|84624209|ref|YP_451581.1| hypothetical protein XOO_2552 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84368149|dbj|BAE69307.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 342

 Score =  166 bits (419), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 138/267 (51%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+C
Sbjct: 75  HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 134

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    +++    +      A+A I     I EV+ +GGDPL L+  +L ++   L  I
Sbjct: 135 FRRHFPYAEETA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAI 192

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+PIV P+R++  L+  L+    P    +HANH  EF      A+  L +
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRD 252

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
            G  LL+Q+VLL G+ND  + LA L        + PYYLH  D  AG +HF +     + 
Sbjct: 253 TGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           +   L  ++SG   P  + ++PG  GK
Sbjct: 313 LHTELATRLSGYLVPRLVREIPGDTGK 339


>gi|145634674|ref|ZP_01790383.1| DNA repair protein RecO [Haemophilus influenzae PittAA]
 gi|145268219|gb|EDK08214.1| DNA repair protein RecO [Haemophilus influenzae PittAA]
          Length = 338

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 99/274 (36%), Positives = 139/274 (50%), Gaps = 2/274 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   NP DP+  Q +    E         DP+ + N + +  I+H+Y +R+L      C 
Sbjct: 63  IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V CR+CFRR     +     + K  + AL YI   S+I EVIF+GGDPL+     L  ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLI 180

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           K L  I H+Q LR H+R+P+V PQRI  E    L E+     +  H NHP E  +    A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANA 240

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L    + LL+QSVLLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
             E  +I  +L+   SG   P    ++ G   K 
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334


>gi|145632578|ref|ZP_01788312.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655]
 gi|144986773|gb|EDJ93325.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655]
          Length = 338

 Score =  165 bits (418), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 137/269 (50%), Gaps = 2/269 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   NP DP+  Q +    E         DP+ + N + +  I+H+Y +R+L      C 
Sbjct: 63  IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V CR+CFRR     +     + K  + AL YI   S+I EVIF+GGDPL+     L  ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLI 180

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           K L  I H+Q LR H+R+P+V PQRI  E    L E      +  H NHP E  +    A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETPLQKVMVTHINHPNEIDQVFTNA 240

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L    + LL+QSVLLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315
             E  +I  +L+   SG   P    ++ G
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 329


>gi|145640274|ref|ZP_01795858.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021]
 gi|145274860|gb|EDK14722.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.4-21]
          Length = 338

 Score =  165 bits (418), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 99/274 (36%), Positives = 139/274 (50%), Gaps = 2/274 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   NP DP+  Q +    E         DP+ + N + +  I+H+Y +R+L      C 
Sbjct: 63  IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCA 122

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V CR+CFRR     +     + K  + AL YI   S+I EVIF+GGDPL+     L  ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAFLI 180

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           K L  I H+Q LR H+R+P+V PQRI  E    L E+     +  H NHP E  +    A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANA 240

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L    + LL+QSVLLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
             E  +I  +L+   SG   P    ++ G   K 
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334


>gi|149916871|ref|ZP_01905372.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
 gi|149822149|gb|EDM81540.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
          Length = 471

 Score =  165 bits (418), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/303 (32%), Positives = 163/303 (53%), Gaps = 21/303 (6%)

Query: 36  SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
           ++ ++P +  LI+   P  DPI RQFIP   EL  LP+  +   D + +   +P+ G+ H
Sbjct: 103 AVRVSPYMIALIDWSKPYADPIRRQFIPTGSEL--LPDHPKLDLDSLHEQADAPVPGLTH 160

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVG--SQKGTVLSSKDT----EAALAYIQEKSQIW 145
           RYPD+ L   L  CPVYCRFC R   VG  +++   +S K T    EAA  YI  + ++ 
Sbjct: 161 RYPDKALFLALDTCPVYCRFCTRSYAVGLDTEEVEKVSLKPTNDRWEAAFEYIASRPELE 220

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-----IQCL 200
           +++ +GGD   L    ++ + + L  + +++ +RF ++ P V PQ+I  +      +  +
Sbjct: 221 DIVISGGDSYNLRADHIKTIGERLLAMPNIRRMRFATKGPAVMPQKILTDTAWVDALTSI 280

Query: 201 KEAG----KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
            E G    K V I  H NHP E ++ +  A++ L   GI + +QSVL +G+ND PE +  
Sbjct: 281 HEQGRKLHKEVCIHTHFNHPNEITQISQRAMNLLFERGITVRNQSVLQRGVNDTPEAMGQ 340

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L++    + + PYY++  DL  G  + R T++    I   ++   +G   P +++D PGG
Sbjct: 341 LVKRLAHVNVHPYYVYVHDLVRGVENLRTTVQTATAIEKEIRGMTAGFNTPVFVVDAPGG 400

Query: 317 YGK 319
            GK
Sbjct: 401 GGK 403


>gi|262368517|ref|ZP_06061846.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046]
 gi|262316195|gb|EEY97233.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046]
          Length = 338

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 2/291 (0%)

Query: 32  SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
           S  + + +       +   NP DP+  Q +P   EL   P+   DP+G+   +   G++H
Sbjct: 44  STQFKLRVPRAFVTRMQKGNPLDPLLLQVLPHHLELEEHPDFVTDPLGEEQANQQPGVLH 103

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           +Y  R LL L   C V+CR+CFRR      +  +  S+D      YIQ +  I EVI +G
Sbjct: 104 KYKTRFLLTLTGACAVHCRYCFRRHF--PYQENLPKSEDWINIQHYIQSQPDINEVILSG 161

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           GDPL LS+++++  ++ L  I  ++ LR HSRVPIV P R++ ELI  LK +   + + +
Sbjct: 162 GDPLTLSNRKIKLWIERLESIPQLKFLRIHSRVPIVMPNRVDDELISILKNSRLRIILVV 221

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
           H+NH  E  +     + +     I + +Q+VLLKG+ND  +IL +L     +  + PYYL
Sbjct: 222 HSNHASELDDFTCRQLQQFVAEKITVFNQAVLLKGVNDHVQILTDLSYRLFDAGVLPYYL 281

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           H  D   G  HF L  ++   +   L   + G   P  + ++ G   K  +
Sbjct: 282 HVLDKVKGAHHFDLNPQDIDFLYQGLLANLPGYLVPKLVREIAGEKNKTPL 332


>gi|312213471|emb|CBX93553.1| hypothetical protein [Leptosphaeria maculans]
          Length = 595

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 22/310 (7%)

Query: 36  SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEE---REDPIGDNNHSPLKGIVH 91
           +I LTP I + ++ +NP +DPI RQF+P K    ++P+    + D + +   SP+ G+VH
Sbjct: 138 AIRLTPHILSRVDWNNPLDDPIRRQFLPLKS--GMIPDHEHMKLDSLNEEADSPVPGLVH 195

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EAALAYIQEKSQIW 145
           RYP R L     +CPVYCRFC R   VG    TV            E    YI++   + 
Sbjct: 196 RYPGRALFLATSICPVYCRFCTRSYAVGGNTDTVAKRAQKPNRARWEVIFKYIEDNDSLQ 255

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL-- 200
           +++ +GGD   L    L+++++ L  I H+  +R  ++   V P R    N   +  L  
Sbjct: 256 DIVLSGGDIFYLEPHLLREIVERLLSIPHIFRIRLATKGLSVAPGRFLDTNDGWMDTLMD 315

Query: 201 -----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
                ++ GK V +  H NH  E +     A  RL   G+I+ +Q+VLL G+N++P+ + 
Sbjct: 316 ISNQGRKLGKQVCLHTHINHASEITWVTRMAARRLFAHGVIVRNQTVLLNGVNNNPDAIK 375

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            L+ T   + I+PYY++  D+  G    R  + E  ++   ++  +SG   P +++DLPG
Sbjct: 376 ELITTLANINIQPYYVYQCDMVQGIEDLRTPLSEILRLDKLMRGTLSGFMMPAFVIDLPG 435

Query: 316 GYGKVKIDTH 325
           G GK  + T+
Sbjct: 436 GGGKRLVSTY 445


>gi|270264931|ref|ZP_06193195.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13]
 gi|270041229|gb|EFA14329.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13]
          Length = 333

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/297 (32%), Positives = 159/297 (53%), Gaps = 10/297 (3%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE-DPIGDNNHSPLKG 88
           E    +S  LTP +  L         +  +F P+ E    LP   + D + +   +P+ G
Sbjct: 13  EEETRFSEKLTPYLKELSKTSQAIKDMY-EFNPEYE---TLPANLDVDLLNEKTSTPVFG 68

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIW 145
            V +Y  ++L+ L + C   CR+C R++ VG     +G +  S+  +  + YI     I+
Sbjct: 69  TVKKYDGQLLVLLSYTCAANCRYCERQDRVGVGLDVEGRLKMSQ-IDDIVDYIANDKSIY 127

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           EVI +GGDPL  + K LQ +   L+ I HV+++R H+R P+ +P ++  EL++ L +A  
Sbjct: 128 EVIASGGDPLT-NPKGLQYLFNRLKAIDHVKVVRIHTRYPLQNPGKVRMELMEELAQAKP 186

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
            VY+++H +HP E   E I  I      G +LL+Q+V LK INDD + L  L     EL 
Sbjct: 187 TVYLSLHIDHPDELQPEVIEMIRAFKKMGYVLLTQTVFLKTINDDKDTLKTLFLRLFELG 246

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           ++PYY++H      T  F + +E+   I+  L+ ++SGL  P +++D+P   GKV +
Sbjct: 247 VRPYYIYHGQEVTSTRRFVMRLEDEMAIMTQLRNELSGLAFPQHVIDIPSASGKVVV 303


>gi|16272281|ref|NP_438493.1| hypothetical protein HI0329 [Haemophilus influenzae Rd KW20]
 gi|68248934|ref|YP_248046.1| lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP]
 gi|260581205|ref|ZP_05849024.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW]
 gi|260582577|ref|ZP_05850367.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127]
 gi|319775807|ref|YP_004138295.1| lysine 2,3-aminomutase [Haemophilus influenzae F3047]
 gi|1176350|sp|P44641|Y329_HAEIN RecName: Full=Uncharacterized KamA family protein HI_0329
 gi|1573296|gb|AAC21990.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|68057133|gb|AAX87386.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP]
 gi|260092130|gb|EEW76074.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW]
 gi|260094388|gb|EEW78286.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127]
 gi|317450398|emb|CBY86614.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3047]
          Length = 338

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 137/269 (50%), Gaps = 2/269 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   NP DP+  Q +    E         DP+ + N + +  I+H+Y +R+L      C 
Sbjct: 63  IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCA 122

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V CR+CFRR     +     + K  + AL YI   S+I EVIF+GGDPL+     L  ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLI 180

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           K L  I H+Q LR H+R+P+V PQRI  E    L E      +  H NHP E  +    A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 240

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L    + LL+QSVLLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315
             E  +I  +L+   SG   P    ++ G
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 329


>gi|317121265|ref|YP_004101268.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885]
 gi|315591245|gb|ADU50541.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885]
          Length = 361

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 86/236 (36%), Positives = 132/236 (55%), Gaps = 5/236 (2%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           DP  + ++    G  H+Y    LL +  VC  YCRFCFR+ +          S D E  L
Sbjct: 68  DPSDEESNYVAPGCQHKYGPTALLLVSKVCGAYCRFCFRKRLFREDVEEHHVSMDVEPGL 127

Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--N 193
            YI    +I  V+ TGGDPL+LS +RL ++L  LR I HV+++R  +++P  +P R+  N
Sbjct: 128 RYIAAHPEITNVLLTGGDPLMLSPRRLDQILTRLRAIPHVKVIRIGTKIPAFEPMRVTDN 187

Query: 194 PELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           PEL++ L+    A   ++ ++H NHP E +EEA+  I  L   G+ L++Q+ LL+ +NDD
Sbjct: 188 PELLEVLRRHSRADARIHFSLHFNHPREMTEEALRCIIALQEVGVTLVNQTPLLRRVNDD 247

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           P +LA L+       I PYY+      AG + F + + EG +IV   K ++SG  +
Sbjct: 248 PAVLAELLERLTWWGIAPYYIFQNRPVAGNADFVVPLREGYRIVEQAKARVSGYAK 303


>gi|269962491|ref|ZP_06176840.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832787|gb|EEZ86897.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 340

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 148/275 (53%), Gaps = 3/275 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  EE  +      DP+ + ++  L G++H+Y +R L+ +   C V CR
Sbjct: 67  NPYDPLLRQVLPLSEEFEVHEGYSNDPLEEQDNE-LPGLLHKYRNRALMIVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     +  +    +     L Y+ ++ ++ EVIF+GGDPL+     +  +L+ + 
Sbjct: 126 YCFRRHFPYQENKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+P+V P RI  EL   L+ +   + +  H NH  E + E  A +++L
Sbjct: 184 KIPHIKRLRIHSRLPVVIPARITDELCHLLRASRLQIVLVTHINHANEINAEFAAQMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+Q VLLK +N+  E    L     +  I PYYLH  D   G +H+ ++ EE 
Sbjct: 244 KQAGVTLLNQGVLLKDVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           ++I+  +  ++SG   P    ++ G   K  +D H
Sbjct: 304 KEIMRGVITRVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|332289569|ref|YP_004420421.1| conserved hypothetical protein, radical SAM superfamily
           [Gallibacterium anatis UMN179]
 gi|330432465|gb|AEC17524.1| conserved hypothetical protein, radical SAM superfamily
           [Gallibacterium anatis UMN179]
          Length = 332

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/277 (36%), Positives = 144/277 (51%), Gaps = 5/277 (1%)

Query: 45  NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
           N +   N NDP+  Q +    E    P   +DP+ + +++ +  ++H+Y +R+LL +   
Sbjct: 57  NKMEKGNANDPLFLQVMTDAAEFLQTPGFVKDPLQEQDNA-IPNLLHKYHNRVLLMVKGG 115

Query: 105 CPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
           C V CR+CFRR     +  G   S + T   L YI + S+I EVIF+GGDPL+   + L 
Sbjct: 116 CAVNCRYCFRRHFPYEANPGNKASWRKT---LDYIAQHSEIEEVIFSGGDPLMAKDRELA 172

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
            +L+ L  I H++ +R HSR+P+V PQRI PEL + L ++     + +H NH  E  E  
Sbjct: 173 WLLEQLNQIPHLKTVRIHSRLPVVIPQRITPELCRSLADSPLNKVLVLHINHANEIDELL 232

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
              +  L  AG+ LL+QSVLLKGINDD  IL  L        I PYYLH  D   G SHF
Sbjct: 233 SRQLQPLKQAGVTLLNQSVLLKGINDDAHILKALNDKLFATGILPYYLHLLDKVEGASHF 292

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
            +  E    I   L    SG   P    ++ G   K 
Sbjct: 293 WIDDERALAIYRQLITLSSGYLVPKLAREIAGEKSKT 329


>gi|251791935|ref|YP_003006655.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700]
 gi|247533322|gb|ACS96568.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700]
          Length = 339

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/259 (37%), Positives = 137/259 (52%), Gaps = 5/259 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           NP DP+  Q +   +E        +DP+ + N+ + +  I+H+Y +R+L  +   C V C
Sbjct: 67  NPKDPLFLQVMSSADEFLQAEGFSKDPLEEQNDKNVVSNILHKYHNRLLFMVKGGCAVNC 126

Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           R+CFRR       KGT    ++ + AL YI +  +I EVIF+GGDPL+     L  ++K 
Sbjct: 127 RYCFRRHFPYEENKGT---KQNWQTALQYIAQHPEIEEVIFSGGDPLMAKDHELGWLIKH 183

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
           L  I H++ LR HSR+P+V PQRI   L   L E      +  H NH  E  E+   A+ 
Sbjct: 184 LENIPHLKRLRIHSRLPVVIPQRITDALCAMLAETRLQKILVTHVNHANEIDEDFSHAMD 243

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
           +L N G++LL+QSVLLK +NDD  IL  L      + I PYYLH  D   G +HF L   
Sbjct: 244 KLKNCGVVLLNQSVLLKNVNDDAYILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDA 303

Query: 289 EGQKIVASLKEKISGLCQP 307
           +   I   L+   SG   P
Sbjct: 304 QALSIYKQLQRITSGYLVP 322


>gi|212710982|ref|ZP_03319110.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM
           30120]
 gi|212686150|gb|EEB45678.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM
           30120]
          Length = 342

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 151/274 (55%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P DP+  Q +  K E +I P    DP+ + +++ +  ++H+Y +R L+ +   C V CR
Sbjct: 67  DPLDPLLLQVLTAKAEFDIHPGFSTDPLEEQDNA-IPSLLHKYRNRALMLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +  +   A+ YI+  S++ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYEDNKG---NKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H+  LR HSR+P+V P+RI   L Q L ++   V +  H NH  E  +E   A+ +
Sbjct: 183 EEIPHITRLRIHSRLPVVIPERITDTLCQRLTQSRLHVIMVTHVNHANEIDDEFAQAMLK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  +G+ LL+QSVLL+ +ND+   LANL     ++ I PYYLH  D   G +HF ++  E
Sbjct: 243 LKRSGVTLLNQSVLLRQVNDNVTALANLSNALFDVGILPYYLHVLDKVQGAAHFLVSDLE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++++  L  ++SG   P    ++ G   K  +D
Sbjct: 303 ARQLIRELLSQVSGYLVPKLAREIGGEPSKTLLD 336


>gi|319896657|ref|YP_004134850.1| lysine 2,3-aminomutase [Haemophilus influenzae F3031]
 gi|317432159|emb|CBY80510.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3031]
          Length = 338

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/270 (35%), Positives = 136/270 (50%), Gaps = 2/270 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+  Q +    E         DP+ + N +    I+H+Y +R+L      C V CR
Sbjct: 67  NPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAAPNILHKYQNRLLFMTKGGCAVNCR 126

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     +     + K  + AL YI   S+I EVIF+GGDPL+     L  ++K L 
Sbjct: 127 YCFRRHFPYDENPG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLE 184

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H+Q LR H+R+P+V PQRI  E    L E      +  H NHP E  +    A+ +L
Sbjct: 185 NIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNAMQKL 244

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
               + LL+QSVLL+G+NDD +IL  L     +  I PYYLH  D   G SHF ++  E 
Sbjct: 245 NTVNVTLLNQSVLLRGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEA 304

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
            +I  +L+   SG   P    ++ G   K 
Sbjct: 305 MQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334


>gi|319790052|ref|YP_004151685.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
           ammonificans HB-1]
 gi|317114554|gb|ADU97044.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
           ammonificans HB-1]
          Length = 343

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 161/281 (57%), Gaps = 7/281 (2%)

Query: 56  IARQFIPQKEELNILPEERE----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
           + R  +P  EELN  PE +     DP+ +        + HRYPDR+L+   + CPV CRF
Sbjct: 49  VRRMLLPSLEELN--PELQNLGEPDPLREERDRKAPCLTHRYPDRVLVVTTNYCPVLCRF 106

Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           C R+        T+ S  + +A L+Y++   Q+ +V+ +GG+PL+L  + L+++L  L+ 
Sbjct: 107 CMRKRNWRRPLFTI-SEDEVDAVLSYVRRNPQVRDVLISGGEPLLLPLELLERLLLGLKK 165

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
           I+ V+++R  +R+P+V+P  +    +  L E  + V++  H NHP E + EA  A+  L 
Sbjct: 166 IESVEVVRIGTRLPVVEPSAVLRSELLSLLERAQKVWVNTHFNHPDELTAEAAEAVKALL 225

Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
             G+ + +Q+VLLKG+ND   +L  L R    ++++PYYL H D   G  HF   I  G 
Sbjct: 226 KCGVPVNNQTVLLKGVNDSVSVLERLFRGLQRIKVRPYYLFHCDPVEGVMHFSTPISLGL 285

Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
           K++  L+ ++S L  P+Y +D PGGYGKV +     +K+G+
Sbjct: 286 KLLEELQTRLSPLALPYYAVDGPGGYGKVPMLPVRFEKLGS 326


>gi|317046674|ref|YP_004114322.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b]
 gi|316948291|gb|ADU67766.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b]
          Length = 342

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 146/274 (53%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +  DP+  Q +  ++E N  P    DP+ D   S + G++H+Y +R LL +   C V CR
Sbjct: 67  DAQDPLLLQVLTSRQEFNDAPGYSTDPL-DEQSSVVPGLLHKYRNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   + ++ +AA+ YI +  ++ E+IF+GGDPL+     L  +++ L
Sbjct: 126 YCFRRHFPYQDNQG---NKRNWQAAIDYIADHPELDEIIFSGGDPLMAKDHELAWLIEAL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             + H++ LR HSR+P+V P RI   L Q L      V +  H NH  E  +E    +  
Sbjct: 183 EKLPHLKRLRIHSRLPVVIPARITEGLCQLLANTRLQVLLVSHINHAQEIDDELRYGMQM 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  AG+ LL+QSVLL+G+ND  + LA+L     +  I PYYLH  D   G +HF +  +E
Sbjct: 243 LKRAGVTLLNQSVLLRGVNDKAQQLADLSNALFDAGILPYYLHVLDKVQGAAHFFVPDDE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + +V  L   +SG   P    ++ G   K  +D
Sbjct: 303 ARALVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336


>gi|310765349|gb|ADP10299.1| conserved uncharacterized protein [Erwinia sp. Ejp617]
          Length = 342

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 151/289 (52%), Gaps = 3/289 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A  +   +P DP+  Q I  ++E    P    DP+ D   S + G++H+Y 
Sbjct: 51  FALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPL-DEQSSVVPGLLHKYR 109

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +R LL +   C V CR+CFRR     +     + ++ + AL YI+++ ++ E+IF+GGDP
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIFSGGDP 167

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L+     L+ ++  L  I H++ LR HSR+P+V P+RI   L Q L ++     +  H N
Sbjct: 168 LMAKDHELEWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLMVTHIN 227

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           H  E  ++    +  L  AG+ LL+QSVLL+ IND    LA L     +  I PYYLH  
Sbjct: 228 HAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPYYLHVL 287

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           D   G +HF ++ E  + IV  L   +SG   P    ++ G   K  +D
Sbjct: 288 DKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336


>gi|145636539|ref|ZP_01792207.1| thiamin transporter membrane protein [Haemophilus influenzae
           PittHH]
 gi|145270364|gb|EDK10299.1| thiamin transporter membrane protein [Haemophilus influenzae
           PittHH]
          Length = 338

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 137/269 (50%), Gaps = 2/269 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   NP DP+  Q +    E         DP+ + N + +  I+H+Y +R+L      C 
Sbjct: 63  IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V CR+CFRR     +     + K  + AL YI    +I EVIF+GGDPL+     L  ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAAHPEIEEVIFSGGDPLMAKDHELAWLI 180

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           K L  I H+Q LR H+R+P+V PQRI  E    L E+     +  H NHP E  +    A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHA 240

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L    + LL+QSVLLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315
             E  +I  +L+   SG   P    ++ G
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 329


>gi|84386955|ref|ZP_00989979.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01]
 gi|84378245|gb|EAP95104.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01]
          Length = 340

 Score =  164 bits (414), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 143/276 (51%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +P  EE  +      DP+ +  ++ + G++H+Y +R L+ +   C + CR
Sbjct: 67  NPHDPLLRQVLPLNEEFEVHQGYSADPLEEQENA-IPGLLHKYKNRALMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L Y+ +  +I EVI +GGDPL+     L+ ++  +
Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQTSLDYVTQHPEINEVILSGGDPLMAKDSELEWLINAI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I HV+ +R HSR+P+V P R+  EL Q L      V +  H NH  E + E   A  +
Sbjct: 183 EQIPHVKTVRIHSRLPVVIPARVTDELCQLLANTRLNVVMVSHINHANEINLELKQAFHK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G  LL+Q V+LKG+N+    L  L     +  + PYY+H  D   G +HF ++ EE
Sbjct: 243 LKQTGATLLNQGVMLKGVNNSANSLKELSENLFDAGVLPYYMHVLDKVQGAAHFYISDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            ++    L  ++SG   P    ++ G   K  +D H
Sbjct: 303 AKRHFKGLISEVSGYLVPKLTREIGGRSSKTPLDLH 338


>gi|304311512|ref|YP_003811110.1| hypothetical protein HDN1F_18820 [gamma proteobacterium HdN1]
 gi|301797245|emb|CBL45465.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 336

 Score =  163 bits (413), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 164/317 (51%), Gaps = 5/317 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + ++S  +L+    + +  ++     +  + + +     + I     +DP+ RQ +PQ  
Sbjct: 13  QLVSSVDELWRLLDLPQSLLESASAAARAFPLRVPQAFVDKIQKGKLDDPLLRQILPQGL 72

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P+   DP+ + + +P +G++H+Y  R+L+     C + CR+CFRR      +   
Sbjct: 73  ELTPPPDFVTDPLAELHANPHRGLLHKYQSRVLIIAGSACAINCRYCFRRHF--PYEDNQ 130

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS    +  + +++   ++ EVIF+GGDPLI S+ RLQ+ +  L  +  ++ +RFH+R P
Sbjct: 131 LSQAQFDELIQHLETHPEVNEVIFSGGDPLINSNARLQRWVDALLLLPQLKRIRFHTRTP 190

Query: 186 IVDPQRINPELIQCLK---EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           +V P RI+  L+   +   ++G+   + +H+NHP E       A+ +L +A + L +Q+V
Sbjct: 191 VVVPARIDEGLLALFRSIAQSGRNAILVVHSNHPSELDHHFDTAMRKLRDAQVTLFNQAV 250

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LL+G+ND  +  A L     +  + PYYLH  D  AG   F +   E  ++   +  ++ 
Sbjct: 251 LLRGVNDHVDAQAALSERLFDAGVLPYYLHLLDPVAGAHDFSIHDTEAFELYRQMAARLP 310

Query: 303 GLCQPFYILDLPGGYGK 319
           G   P    ++PG   K
Sbjct: 311 GFLLPRLAREVPGAPAK 327


>gi|218708305|ref|YP_002415926.1| hypothetical protein VS_0243 [Vibrio splendidus LGP32]
 gi|218321324|emb|CAV17274.1| Hypothetical protein VS_0243 [Vibrio splendidus LGP32]
          Length = 340

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 5/276 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +P  EE  +      DP+ + +++ + G++H+Y  R L+ +   C + CR
Sbjct: 67  NPHDPLLRQVLPLSEEFEVHQGYSADPLEEQDNA-IPGLLHKYKSRALMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L Y+ +  +I EVI +GGDPL+     L+ ++  +
Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I HV+ +R HSR+P+V P R+  EL Q L      V +  H NH  E + E   A  +
Sbjct: 183 EQIPHVKTVRIHSRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G  LL+Q V+LKG+N+    L  L     +  I PYY+H  D   G +HF ++ EE
Sbjct: 243 LKQTGATLLNQGVMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            +     L  ++SG   P    ++ G   K  +D H
Sbjct: 303 AKHHFKGLISEVSGYLVPKLTREIGGRSSKTPLDLH 338


>gi|261416917|ref|YP_003250600.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261373373|gb|ACX76118.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 322

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 148/283 (52%), Gaps = 12/283 (4%)

Query: 44  ANLINPHNPNDPIA--RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101
           A+LI   N  +P+   R+ +P  +EL   P   +DP+GD      + I+ +Y +R L+  
Sbjct: 48  ADLIK--NSAEPVKLLREVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVS 105

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
              C V CRFCFRR         + S         ++   + IWEVI +GGDPL L    
Sbjct: 106 TSACGVRCRFCFRRNYPFQDTQNIASEVSN-----WLDVHTSIWEVILSGGDPLTLGPGP 160

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEF 219
            + +++ + +   V  LR H+R+PI+ P  +  +  + L+E  A     + +H NHP E 
Sbjct: 161 FRDLVEAIAFHPSVTTLRIHTRLPIMRPDLVM-QHFELLRELPARFNCVLVVHVNHPDEL 219

Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
            EE+ A  ++L  +G  LL+QSVLLKG+NDD E L  L R   E  + PYYLH  D A G
Sbjct: 220 DEESAAVFAQLKFSGWTLLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKG 279

Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            +HF ++ E  ++++A ++ K+ G   P  + ++ G   K  I
Sbjct: 280 VAHFEVSDERARELIAQIRTKLPGYLVPKLVREIAGEKSKTPI 322


>gi|259907161|ref|YP_002647517.1| hypothetical protein EpC_04800 [Erwinia pyrifoliae Ep1/96]
 gi|224962783|emb|CAX54238.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96]
 gi|283476968|emb|CAY72852.1| Uncharacterized kamA family protein TP_0121 [Erwinia pyrifoliae DSM
           12163]
          Length = 342

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 150/289 (51%), Gaps = 3/289 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A  +   +P DP+  Q I  ++E    P    DP+ D   S + G++H+Y 
Sbjct: 51  FALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPL-DEQSSVVPGLLHKYR 109

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +R LL +   C V CR+CFRR     +     + ++ + AL YI+++ ++ E+IF+GGDP
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIFSGGDP 167

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L+     L  ++  L  I H++ LR HSR+P+V P+RI   L Q L ++     +  H N
Sbjct: 168 LMAKDHELDWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLMVTHIN 227

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           H  E  ++    +  L  AG+ LL+QSVLL+ IND    LA L     +  I PYYLH  
Sbjct: 228 HAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPYYLHVL 287

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           D   G +HF ++ E  + IV  L   +SG   P    ++ G   K  +D
Sbjct: 288 DKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336


>gi|78357789|ref|YP_389238.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220194|gb|ABB39543.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 384

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/308 (33%), Positives = 159/308 (51%), Gaps = 12/308 (3%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           M  +H T TS     N+  +  ++   ++ +  +Y+        +LIN  +P DPI R  
Sbjct: 1   MTRQHATYTSC---INSLPLDAQEARALRPVMEYYAFRANDYYLSLINWDDPADPIRRII 57

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E     E   DP  +  ++ + G+ H+Y D  +L     C   CRFCFR+ +   
Sbjct: 58  VPHPDETKDWGEL--DPSDEARYTAVPGMQHKYRDTAILLAGKACGGLCRFCFRKRIF-- 113

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +G      DT  ALAYI+   +I  V+ +GGDPL+L    L+ +LK L  ++H+Q +R 
Sbjct: 114 MEGGTPPVPDTGKALAYIRAHKEITNVLISGGDPLLLPLAELEHILKGLDTVEHLQFIRI 173

Query: 181 HSRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGI 235
            SR+P+ DP  I  N  L++ L    +P   +Y+  H NHP E S  A+ A+  L  AGI
Sbjct: 174 GSRMPVFDPGLIAGNTRLLELLSRYSRPGRKLYMQTHFNHPRELSPLALEAVDALQRAGI 233

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
           I+ +Q+ LL+G+ND PE L+ L        + PYYL       G  HF + IEEG  I+ 
Sbjct: 234 IMTNQTPLLRGVNDCPETLSELFAKLAGAGVPPYYLFVCRPTKGNRHFTVPIEEGYDILQ 293

Query: 296 SLKEKISG 303
             ++ +SG
Sbjct: 294 KAQKTLSG 301


>gi|302326000|gb|ADL25201.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 332

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 148/283 (52%), Gaps = 12/283 (4%)

Query: 44  ANLINPHNPNDPIA--RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101
           A+LI   N  +P+   R+ +P  +EL   P   +DP+GD      + I+ +Y +R L+  
Sbjct: 58  ADLIK--NSAEPVKLLREVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVS 115

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
              C V CRFCFRR         + S         ++   + IWEVI +GGDPL L    
Sbjct: 116 TSACGVRCRFCFRRNYPFQDTQNIASEVSN-----WLDVHTSIWEVILSGGDPLTLGPGP 170

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEF 219
            + +++ + +   V  LR H+R+PI+ P  +  +  + L+E  A     + +H NHP E 
Sbjct: 171 FRDLVEAIAFHPSVTTLRIHTRLPIMRPDLVM-QHFELLRELPARFNCVLVVHVNHPDEL 229

Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
            EE+ A  ++L  +G  LL+QSVLLKG+NDD E L  L R   E  + PYYLH  D A G
Sbjct: 230 DEESAAVFAQLKFSGWTLLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKG 289

Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            +HF ++ E  ++++A ++ K+ G   P  + ++ G   K  I
Sbjct: 290 VAHFEVSDERARELIAQIRTKLPGYLVPKLVREIAGEKSKTPI 332


>gi|156972506|ref|YP_001443413.1| lysine 2;3-aminomutase [Vibrio harveyi ATCC BAA-1116]
 gi|156524100|gb|ABU69186.1| hypothetical protein VIBHAR_00138 [Vibrio harveyi ATCC BAA-1116]
          Length = 340

 Score =  163 bits (412), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 148/275 (53%), Gaps = 3/275 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+ RQ +P  EE  +      DP+ + ++  L G++H+Y +R L+ +   C V CR
Sbjct: 67  NPYDPLLRQVLPLSEEFEVHEGYSNDPLEEQDNE-LPGLLHKYRNRALMIVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     +  +    +     L Y+ ++ ++ EVIF+GGDPL+     +  +L+ + 
Sbjct: 126 YCFRRHFPYQENKS--GKQAWIKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR HSR+P+V P RI  EL Q L+ +   + +  H NH  E + E  A +++L
Sbjct: 184 QIPHIKRLRIHSRLPVVIPARITDELCQRLRASRLQIVLVTHINHANEINAEFAAQMAKL 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG+ LL+Q VLLK +N+  E    L     +  I PYY+H  D   G +H+ ++ EE 
Sbjct: 244 KQAGVTLLNQGVLLKDVNNSIEAQVALNEALFDAGILPYYVHVLDKVQGAAHYFVSDEEA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           + I+  +  ++SG   P    ++ G   K  +D H
Sbjct: 304 KTIMRGVITRVSGYLVPKLTREIGGRPSKTPLDLH 338


>gi|148825389|ref|YP_001290142.1| DNA repair protein RecO [Haemophilus influenzae PittEE]
 gi|229846415|ref|ZP_04466523.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1]
 gi|148715549|gb|ABQ97759.1| DNA repair protein RecO [Haemophilus influenzae PittEE]
 gi|229810508|gb|EEP46226.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1]
 gi|309972513|gb|ADO95714.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
          Length = 338

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 137/269 (50%), Gaps = 2/269 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   NP DP+  Q +    E         DP+ + N + +  I+H+Y +R+L      C 
Sbjct: 63  IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V CR+CFRR     +     + K  + AL YI    +I EVIF+GGDPL+     L  ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 180

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           K L  I H+Q LR H+R+P+V PQRI  E    L E+     +  H NHP E  +    A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHA 240

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L    + LL+QSVLLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315
             E  +I  +L+   SG   P    ++ G
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 329


>gi|304413330|ref|ZP_07394803.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1]
 gi|304284173|gb|EFL92566.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1]
          Length = 338

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 149/277 (53%), Gaps = 7/277 (2%)

Query: 46  LINPHNPNDPIARQFIPQKEELNILPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
           L+   + NDP+ RQ +    E  I PE+   DP+ +   +   G++H+Y +R LL +   
Sbjct: 62  LMRKGDANDPLLRQVLTSSAEF-ISPEDFITDPLAEQ-RTAAPGLLHKYGNRALLLVKGS 119

Query: 105 CPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
           C + CR+CFRR       +G   + K+ + AL YI++  ++ E+IF+GGDPL+   + L 
Sbjct: 120 CAINCRYCFRRHFPYQDNQG---NKKNWQLALDYIRQHPELDEIIFSGGDPLMAKDRELS 176

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
            ++  L  I H++ LR H+R+P+V P RI   L Q    +   + +  H NH  E     
Sbjct: 177 WLIDALEKIAHIKRLRIHTRLPVVIPARITIALCQKFHASRLQIVLVTHINHANEIDNVL 236

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
             ++++L   G+ LL+QSVLL+G+ND+ E+LA L        I PYYLH  D   G +HF
Sbjct: 237 CDSMAKLKTKGVTLLNQSVLLRGVNDNVEVLAQLSNALFNAGILPYYLHVLDKVKGAAHF 296

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
            +  +E ++++  L   ISG   P  + ++ G   K 
Sbjct: 297 MVNDDEARRLINGLLGCISGYLVPRLVREIAGEKSKT 333


>gi|292489640|ref|YP_003532530.1| kamA family protein [Erwinia amylovora CFBP1430]
 gi|292898145|ref|YP_003537514.1| hypothetical protein EAM_0421 [Erwinia amylovora ATCC 49946]
 gi|291197993|emb|CBJ45095.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
 gi|291555077|emb|CBA23181.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora
           CFBP1430]
 gi|312173816|emb|CBX82070.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora ATCC
           BAA-2158]
          Length = 342

 Score =  162 bits (411), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 95/289 (32%), Positives = 149/289 (51%), Gaps = 3/289 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A  +   +P DP+  Q I  ++E    P    DP+ D   S + G++H+Y 
Sbjct: 51  FALRVPKAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPL-DEQSSVVPGLLHKYR 109

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +R LL +   C V CR+CFRR     +     + ++ + AL YI+++ ++ E+I +GGDP
Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIILSGGDP 167

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L+     L  ++  L  I H++ LR HSR+P+V P+RI   L Q L +      +  H N
Sbjct: 168 LMAKDHELDWLIGQLEQIPHLRRLRIHSRLPVVIPKRITEALCQRLAQTRLQTLMVTHIN 227

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           H  E  E+    +  L  AG+ LL+QSVLL+ IND   +LA L     +  I PYYLH  
Sbjct: 228 HAQEIDEDLRHGMRMLKRAGVTLLNQSVLLRDINDSAPVLAALSNALFDAGILPYYLHVL 287

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           D   G +HF ++ E  + IV  L   +SG   P    ++ G   K  +D
Sbjct: 288 DKVQGAAHFYVSDERARIIVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336


>gi|160938417|ref|ZP_02085772.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438790|gb|EDP16547.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC
           BAA-613]
          Length = 419

 Score =  162 bits (411), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/302 (32%), Positives = 162/302 (53%), Gaps = 10/302 (3%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEE 66
           +T AQ+L     +  ++ + +  I   + + +T    +LI+ +NP  DP+ R  IP   E
Sbjct: 65  VTRAQELKTYMRLTSQEEEHMTRILEQFPMTVTRYYLSLIDWNNPEQDPVFRMSIPSIRE 124

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
            ++  +   D  G+ +++ L G+ H+Y    L+   H C +YCR CFR+ +VG   G   
Sbjct: 125 TDLSGDF--DTSGEADNTVLPGLQHKYRQTALILSTHRCAMYCRHCFRKRLVGISGGETA 182

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
            + D  AA  YI    +I  V+ +GGD  + S++ +++ L+    IKH+ ++RF +R P+
Sbjct: 183 GNVDQMAA--YIVSHPEITNVLISGGDSFLNSNQIIRRYLEAFSSIKHLDLIRFGTRTPV 240

Query: 187 VDPQRI--NPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           V P RI  +PEL+  L    K   +Y+    NH  E + +A+ AI  L +AGII+ +Q+V
Sbjct: 241 VLPMRIYDDPELLDILARYTKIKQIYVVTQFNHSNELTPQAVKAIRCLMDAGIIVKNQTV 300

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKI 301
           LLKGINDD   L  L++      + PYY+      +G  S F++ + EG +IV   K   
Sbjct: 301 LLKGINDDAGSLGTLLKNLTRYGVIPYYIFQCRPVSGVKSQFQIPLTEGCRIVEEAKNMQ 360

Query: 302 SG 303
           +G
Sbjct: 361 NG 362


>gi|239625483|ref|ZP_04668514.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239519713|gb|EEQ59579.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales
           bacterium 1_7_47FAA]
          Length = 387

 Score =  162 bits (411), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 93/302 (30%), Positives = 167/302 (55%), Gaps = 10/302 (3%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEE 66
           +T A +L     +   Q++ +  I + + + +T    +LIN  NP  DP+ R  IP  EE
Sbjct: 31  ITKASELREYMDLTDSQVEHLDRILSQFPMTVTRYYLSLINWDNPFTDPVFRMCIPSIEE 90

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
            ++  +   D  G+ +++ + G+ H+Y    L+   H C +YCR CFR+ +VG       
Sbjct: 91  TDLSGDF--DTSGEADNTVISGLQHKYSQTALILSTHRCAMYCRHCFRKRLVGISDDE-- 146

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           ++ + E   AY+ + S+I  ++ +GGD  + S++ +++ L+    I H+ ++RF +R P+
Sbjct: 147 TADNIEEMAAYVSQHSEISNILISGGDAFLNSNQVIRRYLEQFCSIPHLDLIRFGTRTPV 206

Query: 187 VDPQRI--NPELIQCLKE--AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           V P RI  +PEL+  LK     K +Y+    NHP E + EA  AI  L ++GI++ +Q+V
Sbjct: 207 VLPMRIYDDPELLALLKTYTQKKQIYVVTQFNHPNEITHEARKAIKALLDSGIVVKNQTV 266

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKI 301
           LLKG+ND+ + L  L++      + PYY+      +G  + F+L +++G +IV + K   
Sbjct: 267 LLKGVNDNSQTLGLLLKDLTRCGVIPYYIFQCRPVSGVKNQFQLPLKQGYEIVEAAKHLQ 326

Query: 302 SG 303
           +G
Sbjct: 327 NG 328


>gi|301169034|emb|CBW28631.1| predicted lysine aminomutase [Haemophilus influenzae 10810]
          Length = 338

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 137/274 (50%), Gaps = 2/274 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   NP DP+  Q +    E         DP+ + N + +  I+H+Y +R+L      C 
Sbjct: 63  IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V CR+CFRR     +     + K  + AL YI    +I EVIF+GGDPL+     L  ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 180

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           K L  I H+Q LR H+R+P+V PQRI  E    L E      +  H NHP E  +    A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 240

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L    + LL+QSVLLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
             E  +I  +L+   SG   P    ++ G   K 
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334


>gi|145628680|ref|ZP_01784480.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21]
 gi|144979150|gb|EDJ88836.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21]
          Length = 309

 Score =  162 bits (410), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 136/269 (50%), Gaps = 2/269 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   NP DP+  Q +    E         DP+ + N + +  I+H+Y +R+L      C 
Sbjct: 34  IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCA 93

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V CR+CFRR     +     + K  + AL YI    +I EVIF+GGDPL+     L  ++
Sbjct: 94  VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 151

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           K L  I H+Q LR H+R+P+V PQRI  E    L E      +  H NHP E  +    A
Sbjct: 152 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 211

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L    + LL+QSVLLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++
Sbjct: 212 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 271

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315
             E  +I  +L+   SG   P    ++ G
Sbjct: 272 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 300


>gi|148244460|ref|YP_001219154.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326287|dbj|BAF61430.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA]
          Length = 314

 Score =  162 bits (410), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 148/277 (53%), Gaps = 7/277 (2%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A LI+  N +DP+ +Q I  K  L+        P+ D  +SP+ G++H+YP+R+LL   
Sbjct: 41  FARLIDKRNKDDPLLKQVITPKN-LSKSTNFSLSPLEDEKYSPVAGLIHKYPNRVLLIAS 99

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            VC ++C+FCFR+     +   + +  + +    YI    +I EVI +GGDPL LS  +L
Sbjct: 100 QVCAIHCQFCFRQNFNYVEHDAISNWVEIQN---YIINDVKINEVILSGGDPLSLSDDKL 156

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
             ++  + +I+H++ LR H+R  +V+P RI  +L++   ++   + I +H NH  E S +
Sbjct: 157 STLIDNIAHIEHIKTLRVHTRNAVVEPSRITRKLVEIFNQSRLNIVIVLHINHAQELSVQ 216

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
               I  L    + LLSQSVLL+G+ND  E+L  L  +  +L I PYYLH  D   G   
Sbjct: 217 FAQKIIELTR--VTLLSQSVLLRGVNDSIEVLTELCLSLFDLGILPYYLHMLDKVQGAQD 274

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
           F +  +   ++   LK  +SG   P  + D    Y K
Sbjct: 275 FLVKDDYAIQLHQQLKSNLSGYLVPKLVRD-SSSYSK 310


>gi|325577289|ref|ZP_08147773.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325160871|gb|EGC72992.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 340

 Score =  162 bits (410), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 133/258 (51%), Gaps = 4/258 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+  Q +  ++E        +DP+ +   + +  I+H+Y +R+L      C V CR
Sbjct: 69  NPKDPLFLQVMTVQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCR 128

Query: 111 FCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR     Q  G  +S K    A+ YI    +I EVIF+GGDP++        +L+ L
Sbjct: 129 YCFRRHFPYDQNPGNKVSWKQ---AIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERL 185

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             IKH+Q LR HSR+P+V P+RI  E    L  +        H NHP E  E    A+ +
Sbjct: 186 EKIKHLQRLRIHSRLPVVIPERITDEFCDLLLNSPLQAVFVTHINHPNEIDEGLAFAMQK 245

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  A +ILL+QSVLLK +ND+P  L  L     +  I PYYLH  D   G SHF ++ E 
Sbjct: 246 LTEAKVILLNQSVLLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDER 305

Query: 290 GQKIVASLKEKISGLCQP 307
             +I   L+   SG   P
Sbjct: 306 ALQIYRELQALTSGYLVP 323


>gi|268590834|ref|ZP_06125055.1| KamA family protein [Providencia rettgeri DSM 1131]
 gi|291313616|gb|EFE54069.1| KamA family protein [Providencia rettgeri DSM 1131]
          Length = 342

 Score =  162 bits (410), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 147/274 (53%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P DP+  Q +  K E +I P    DP+ + ++  +  ++H+Y +R LL +   C V CR
Sbjct: 67  DPLDPLLLQVLTAKAEFDIHPGFSTDPLEEQDNE-IPSLLHKYHNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +  +   A+ YI+  +++ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYEDNKG---NKNNWLMAVDYIKNHTELNEIIFSGGDPLMAKDHELDWLISQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H+Q LR H+R+P+V P+RI   L + L  +   V +  H NH  E  E    A+ +
Sbjct: 183 EAIPHIQRLRIHTRLPVVIPERITETLCKRLASSRLQVIMVTHVNHANEIDESFTNAMQK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  +G+ LL+QSVLL+ +ND+   L NL     +  I PYYLH  D   G +HF ++  E
Sbjct: 243 LKLSGVTLLNQSVLLRQVNDNVTALMNLSNALFDTGILPYYLHVLDKVQGAAHFLVSDTE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++++  L  K+SG   P    ++ G   K  +D
Sbjct: 303 ARQLIQQLLSKVSGYLVPKLAREIGGEPSKTLLD 336


>gi|301166960|emb|CBW26539.1| putative L-lysine 2,3-aminomutase [Bacteriovorax marinus SJ]
          Length = 447

 Score =  162 bits (410), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 93/333 (27%), Positives = 180/333 (54%), Gaps = 19/333 (5%)

Query: 20  IKKEQIDEIK--EISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEE-LNILPEERE 75
           I KE +D+IK  +     +I +TP I  LI+  +P + P+ +QF+P   + L   P  + 
Sbjct: 62  ISKEHMDDIKAGQKITPMNIRITPYIFALIDWRDPLSCPLRKQFLPMGSQFLEDHPYYQS 121

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSK 129
           D +G++  SP+  + HRYPD++L     +CPVYC +C R  ++G    ++       + K
Sbjct: 122 DSLGEDVDSPVPMLTHRYPDKVLFLPTTICPVYCSYCTRSRIIGGSTESIEKETYGANQK 181

Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
             +    Y+    ++ +V+ +GGD  +L+ K+++ + + L  I H++ +R  ++   + P
Sbjct: 182 KWDDVFEYLSNHPKVEDVVVSGGDAFMLTPKQIRYIGENLLRIPHIRRIRLATKGVAIFP 241

Query: 190 QRI--NPELIQCLKEA-------GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           Q++  + +  + +++        GK V I  H +   E ++ +  A+ RL  AGI++ +Q
Sbjct: 242 QKVLTDDDWFEAVQDIHKLGRSFGKQVVIHTHFSCAKEITKWSQMAMDRLFQAGIVVRNQ 301

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VL +G+N+  + +  L R    L I+PYY++  D+  G  HFR T++E +++  +++  
Sbjct: 302 AVLQEGVNNHVDEMVLLTRQVGYLNIQPYYVYMHDMVPGCEHFRTTLKEAEELEKAVRGT 361

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
            +G   P ++ DLPGG GK  + ++      NG
Sbjct: 362 TAGFNTPTFVCDLPGGGGKRHVASYEYYDEENG 394


>gi|145638760|ref|ZP_01794369.1| DNA repair protein RecO [Haemophilus influenzae PittII]
 gi|145272355|gb|EDK12263.1| DNA repair protein RecO [Haemophilus influenzae PittII]
 gi|309750250|gb|ADO80234.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
          Length = 338

 Score =  162 bits (410), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 98/274 (35%), Positives = 137/274 (50%), Gaps = 2/274 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   NP DP+  Q +    E         DP+ + N + +  I+H+Y +R+L      C 
Sbjct: 63  IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCA 122

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V CR+CFRR     +     + K  + AL YI    +I EVIF+GGDPL+     L  ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 180

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           K L  I H+Q LR H+R+P+V PQRI  E    L E      +  H NHP E  +    A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 240

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L    + LL+QSVLLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
             E  +I  +L+   SG   P    ++ G   K 
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334


>gi|254491873|ref|ZP_05105052.1| KamA family protein [Methylophaga thiooxidans DMS010]
 gi|224463351|gb|EEF79621.1| KamA family protein [Methylophaga thiooxydans DMS010]
          Length = 335

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 139/272 (51%), Gaps = 2/272 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           + NDP+ RQ  P  +E         DP+GD+      GI+ +Y  R LL     C ++CR
Sbjct: 65  DANDPLLRQVFPLIDEGYPAEGYLTDPVGDHLAVTSPGILQKYQGRALLLTTGACAIHCR 124

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    S    +  S   + ++  +     I EVI +GGDPL L   +L K++  L 
Sbjct: 125 YCFRRHFPYSDSNPL--SSQWQQSIEQLASDETISEVILSGGDPLSLHDDKLAKLVADLA 182

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR H+R+PIV P+RIN  L+  ++     V + IHANH  E    A  A+  L
Sbjct: 183 EIPHLKRLRIHTRLPIVLPERINDSLLNWIQATRFKVVVVIHANHANEIDAHAEQALISL 242

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AG  LL+Q+VLL+GIND  E L+ L     ++ + PYYLH  D  AG  HF +     
Sbjct: 243 KQAGCQLLNQTVLLRGINDSVESLSALSERLNDVDVMPYYLHLLDKVAGAQHFDVNQVRA 302

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            K+V  L++ + G   P  + +  G   K  I
Sbjct: 303 VKLVDDLRKVLPGYLVPRLVREQQGEASKTVI 334


>gi|52424562|ref|YP_087699.1| KamA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52306614|gb|AAU37114.1| KamA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 336

 Score =  162 bits (409), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 135/258 (52%), Gaps = 5/258 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           N  DP+  Q +   +E        +DP+ +        I+H+Y +R+LL +   C + CR
Sbjct: 66  NAQDPLFLQAMSSADEFLTADGFSKDPL-EEQQVVAPNILHKYKNRLLLMVKGGCAINCR 124

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       +G   +  + + AL YI    QI EVIF+GGDPL+     L  ++K L
Sbjct: 125 YCFRRHFPYADNQG---NKANWQKALDYISANPQIEEVIFSGGDPLMAKDHELDWLIKKL 181

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H+Q LR H+R+P+V PQRI     + L E+     +  H NH  E  E+   A+++
Sbjct: 182 EKIPHLQRLRIHTRLPVVIPQRITGAFCKILTESRLNTVLVTHINHGNEIDEQLTRALNK 241

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L NAG++LL+QSVLLK IND+ + L NL        I PYYLH  D   G SHF +  + 
Sbjct: 242 LKNAGVVLLNQSVLLKNINDNAQTLKNLSDKLFRAGILPYYLHLLDKVEGASHFYVPDQR 301

Query: 290 GQKIVASLKEKISGLCQP 307
             +I   L+   SG   P
Sbjct: 302 AVEIYRELQSLTSGYLVP 319


>gi|315634854|ref|ZP_07890136.1| KamA family protein [Aggregatibacter segnis ATCC 33393]
 gi|315476406|gb|EFU67156.1| KamA family protein [Aggregatibacter segnis ATCC 33393]
          Length = 339

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/259 (36%), Positives = 138/259 (53%), Gaps = 5/259 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           NP DP+  Q +   +E        +DP+ +  + + +  I+H+Y +R+L  +   C V C
Sbjct: 67  NPKDPLFLQVMSSADEFLQAEGFSKDPLEEQEDKNVVSNILHKYHNRLLFMVKGGCAVNC 126

Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           R+CFRR       KGT    ++ + AL YI E+ +I EVIF+GGDPL+     L+ ++K 
Sbjct: 127 RYCFRRHFPYQDNKGT---KQNWQKALQYIAERPEIEEVIFSGGDPLMAKDHELEWLIKH 183

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
           L  I H++ LR HSR+P+V PQRI     + L +      +  H NH  E   +   A++
Sbjct: 184 LENIPHLKRLRIHSRLPVVIPQRITDTFCRLLAQTRLQKILVTHVNHANEIDADFAHAMA 243

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
           +L + G++LL+QSVLLK +NDD  IL  L      + I PYYLH  D   G +HF L   
Sbjct: 244 KLKDCGVVLLNQSVLLKNVNDDALILKTLSDRLFSVGILPYYLHLLDKVEGATHFYLDDA 303

Query: 289 EGQKIVASLKEKISGLCQP 307
              KI   L+   SG   P
Sbjct: 304 RALKIYKELQRISSGYLVP 322


>gi|301154946|emb|CBW14409.1| predicted lysine aminomutase [Haemophilus parainfluenzae T3T1]
          Length = 340

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/257 (35%), Positives = 133/257 (51%), Gaps = 2/257 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+  Q +  ++E        +DP+ +   + +  I+H+Y +R+L      C V CR
Sbjct: 69  NPKDPLFLQVMTAQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCR 128

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR     Q     +S   + A+ YI    +I EVIF+GGDP++        +L+ L 
Sbjct: 129 YCFRRHFPYDQNPGNKTS--WQQAIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERLE 186

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H+Q LR HSR+P+V P+RI  E    L ++        H NHP E  EE   A+ +L
Sbjct: 187 KIPHLQRLRIHSRLPVVIPERITDEFCDLLLKSPLQTVFVTHINHPNEIDEELALAMQKL 246

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             A + LL+QSVLLK +ND+P  L  L     +  I PYYLH  D   G SHF ++ E+ 
Sbjct: 247 VGAKVTLLNQSVLLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDEKA 306

Query: 291 QKIVASLKEKISGLCQP 307
            +I   L+   SG   P
Sbjct: 307 LQIYKELQALTSGYLVP 323


>gi|307249881|ref|ZP_07531855.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306858070|gb|EFM90152.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 333

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/261 (35%), Positives = 138/261 (52%), Gaps = 11/261 (4%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           + NDP+  Q +   EE   +    +DP+ +  HSP   I+H+Y +R+L  + + C + CR
Sbjct: 64  DKNDPLFLQAMSAAEEFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCR 122

Query: 111 FCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           +CFRR      V S K         +  L YI   +++ EVIF+GGDPL+     L  ++
Sbjct: 123 YCFRRHFPYDDVKSGKAV------WQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLI 176

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
             L  I H++ LR H+R+P+V P RI  +L   L ++   V +  H NHP E  E     
Sbjct: 177 SALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADK 236

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           +++L  A ++LL+QSVLLKG+ND+ +IL  L     E  + PYYLH  D   G SHF + 
Sbjct: 237 LNQLRQANVVLLNQSVLLKGVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIE 296

Query: 287 IEEGQKIVASLKEKISGLCQP 307
             +  +I   L+   SG   P
Sbjct: 297 DRQAAEIYKELQRITSGYLVP 317


>gi|86147223|ref|ZP_01065538.1| lysine 2;3-aminomutase [Vibrio sp. MED222]
 gi|85834938|gb|EAQ53081.1| lysine 2;3-aminomutase [Vibrio sp. MED222]
          Length = 340

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 141/274 (51%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +P  EE ++      DP+ +  ++ + G++H+Y  R L+ +   C + CR
Sbjct: 67  NPHDPLLRQVLPLSEEFDVHQGYSADPLEEQENA-IPGLLHKYKSRALMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   S    + +L Y+ +  +I EVI +GGDPL+     L+ ++  +
Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I HV+ +R HSR+P+V P R+  EL Q L      V +  H NH  E + E   A  +
Sbjct: 183 EQIPHVKTVRIHSRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G  LL+Q V+LKG+N+    L  L     +  I PYY+H  D   G +HF ++ EE
Sbjct: 243 LKQTGATLLNQGVMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEE 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            +     L  ++SG   P    ++ G   K  +D
Sbjct: 303 AKHHFKGLISEVSGYLVPKLTREIGGRSSKTPLD 336


>gi|256823217|ref|YP_003147180.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM
           16069]
 gi|256796756|gb|ACV27412.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM
           16069]
          Length = 349

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 138/273 (50%), Gaps = 3/273 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NPNDP+ RQ +   +E   +     DP+ + N S + G++H+Y  R+L+ L   C + CR
Sbjct: 71  NPNDPLLRQVLAVSDENQEVAGFVPDPLQEQN-SEVPGLLHKYRSRVLVMLSTACAINCR 129

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRRE    +          +    Y+    +I EVI +GGDPL ++   L+  ++ L 
Sbjct: 130 YCFRREFPYQEHQA--GRNGWQPIFDYLTAHPEINEVILSGGDPLAVNDSYLKDFIQQLE 187

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I  +  LR H+R+P+V PQR+   LI  L +      + +H NHP E  E    A+ RL
Sbjct: 188 RIPSIIRLRIHTRLPLVIPQRVTQGLIDALLQTRLQTVVVLHINHPNEMGELFAQAVRRL 247

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
              GI LL+QSVLL G+N++   LA L        I PYYLH  D   G  HF +   + 
Sbjct: 248 HQNGIHLLNQSVLLDGVNNNSSTLAELSEKLFAHHILPYYLHQLDKVRGAHHFAVEEAQA 307

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            KI+  L  +++G   P  + +  G   K  ID
Sbjct: 308 IKIMQELNTRLAGFLVPKLVREEAGKTSKTPID 340


>gi|329123649|ref|ZP_08252209.1| KamA family protein [Haemophilus aegyptius ATCC 11116]
 gi|327469848|gb|EGF15313.1| KamA family protein [Haemophilus aegyptius ATCC 11116]
          Length = 338

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 137/274 (50%), Gaps = 2/274 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   NP DP+  Q +    E         DP+ + N + +  I+H+Y +R+L      C 
Sbjct: 63  IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMTKGGCA 122

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V CR+CFRR     +     + K  + AL YI   S+I EVIF+GGDPL+     L  ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLI 180

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           K L  I H+Q LR H+R+P+V PQRI  E    L E      +  H NHP E  +    A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNA 240

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L    + LL+QSVLL+ +NDD +IL  L     +  I PYYLH  D   G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
             E  +I  +L+   SG   P    ++ G   K 
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334


>gi|83771333|dbj|BAE61465.1| unnamed protein product [Aspergillus oryzae]
          Length = 464

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 157/303 (51%), Gaps = 19/303 (6%)

Query: 36  SIALTPVIANLINPHNP-NDPIARQFIPQKEELN-ILPEEREDPIGDNNHSPLKGIVHRY 93
           ++ LTP I +LIN     +DPI RQFIP         P+ + D + + + SP+KG+VHRY
Sbjct: 117 AVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRY 176

Query: 94  PDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLS------SKDTEAALAYIQEKSQIWE 146
           PD+    L   VCPVYCRFC R   VG Q  TV         K  E    YI    ++ +
Sbjct: 177 PDKNDSYLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTD 236

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL--- 200
           V+ +GGD   L   +L+++  TL  I H++ +RF S+   V P RI   + E  + L   
Sbjct: 237 VVVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRVLIEI 296

Query: 201 ----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
               +E GK + +  H NHP E S     A  +L +  + + +Q+VLL  +N++   +  
Sbjct: 297 SNRGREKGKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKR 356

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L+R   +  I+PYY++  D+  G    R  + +   I + ++  I+G   P +++DLPGG
Sbjct: 357 LIRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGG 416

Query: 317 YGK 319
            GK
Sbjct: 417 GGK 419


>gi|319786811|ref|YP_004146286.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465323|gb|ADV27055.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 338

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 141/267 (52%), Gaps = 2/267 (0%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P  +E  I+P    D +GD       G++ +Y  R LL     C + CR+C
Sbjct: 71  HDPLLRQVLPVVDEERIVPGFGLDAVGDGLAKKADGVIQKYHGRALLVATGSCAINCRYC 130

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    +++    +      A+A I     I EVI +GGDPL L+  +L ++   L  I
Sbjct: 131 FRRHFPYAEE--TAARDGWAGAVAAIAADPGIDEVILSGGDPLSLATSKLAELTAQLATI 188

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR HSR+P+V P+RI+   ++ +     PV   IHANH  EF      A+ RL  
Sbjct: 189 PHIRRLRIHSRLPVVLPERIDDAFVEWMSALPWPVAFVIHANHANEFDASVDQALGRLRQ 248

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AG  LL+Q+VLL+G+ND  + LA+L        + PYYLH  D   G +HF +  E  ++
Sbjct: 249 AGAQLLNQAVLLRGVNDSVDALADLSERSYAAGVLPYYLHQLDRIQGAAHFEVGDERARE 308

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319
           +   L  ++SG   P  + ++ G  GK
Sbjct: 309 LHRQLAARLSGYLVPKLVREVQGDPGK 335


>gi|322514442|ref|ZP_08067484.1| KamA family protein [Actinobacillus ureae ATCC 25976]
 gi|322119649|gb|EFX91711.1| KamA family protein [Actinobacillus ureae ATCC 25976]
          Length = 333

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 92/261 (35%), Positives = 139/261 (53%), Gaps = 11/261 (4%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           + NDP+  Q +   EE   +    +DP+ +  HSP   I+H+Y +R+L  + + C + CR
Sbjct: 64  DKNDPLFLQAMSAAEEFLQMQGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCR 122

Query: 111 FCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           +CFRR      V S K         +  L YI   +++ EVIF+GGDPL+     L  ++
Sbjct: 123 YCFRRHFPYDEVKSGKAV------WQQGLDYIAAHTELEEVIFSGGDPLMAKDSELNWLI 176

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
             L  I H++ LR H+R+P+V P RI  +L   L ++   V I  H NHP E  E  +  
Sbjct: 177 SALEQIPHIKTLRIHTRLPVVIPSRITEQLCNRLSKSRLKVVIVTHINHPNEVDEVLVDR 236

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           +++L  A ++LL+QSVLLKGIND+ + L  L     +  + PYYLH  D   G SHF + 
Sbjct: 237 LNQLRQANVVLLNQSVLLKGINDNAQTLKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIE 296

Query: 287 IEEGQKIVASLKEKISGLCQP 307
            ++  +I   L+   SG   P
Sbjct: 297 DQQAAEIYKELQRISSGYLVP 317


>gi|149910194|ref|ZP_01898840.1| hypothetical protein PE36_23316 [Moritella sp. PE36]
 gi|149806780|gb|EDM66744.1| hypothetical protein PE36_23316 [Moritella sp. PE36]
          Length = 337

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 153/272 (56%), Gaps = 3/272 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP DP+  Q +P+++E        +DP+ D + + + G++H+Y +R+L  +   C + CR
Sbjct: 67  NPKDPLFLQVMPKQQEFIQQAGFIKDPL-DEHEAVVPGLLHKYTNRVLFIVRGGCAINCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR           +  + + A+ YI+ K +I EVIF+GGDPL+ + ++L  ++  L 
Sbjct: 126 YCFRRHFPYQDNSN--NKHEWQQAIDYIRAKPEIIEVIFSGGDPLMANDEQLGWLVAQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ LR H+R+P+V P R+  EL+  LK++     + +H NHP E + E  AA+++ 
Sbjct: 184 QIPHLKRLRIHTRLPVVMPTRVTDELVTLLKQSSLRCSVVLHINHPNELAAELPAALAKF 243

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             AGI L +Q+VLL  IND+ + L  L     + RI+PYYLH  D   G SHF +  E+ 
Sbjct: 244 TTAGISLYNQAVLLADINDNADDLVELHERLFDNRIQPYYLHLLDKVEGASHFDVPEEKA 303

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             I+  L  ++ G   P  + ++ G   K  I
Sbjct: 304 VAIMNELLLRLPGFLVPKLVREIGGEKSKTPI 335


>gi|229844579|ref|ZP_04464719.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1]
 gi|229812828|gb|EEP48517.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1]
          Length = 338

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 136/274 (49%), Gaps = 2/274 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           I   NP DP+  Q +    E         DP+ + N + +  I+H+Y +R+L      C 
Sbjct: 63  IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V CR+CFRR     +     + K  + AL YI    +I EVIF+GGDPL+     L  ++
Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 180

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           K L  I H+Q LR H+R+P+V PQRI  E    L E      +  H NHP E  +    A
Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 240

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L    + LL+QSVLLK +NDD +IL  L     +  I PYYLH  D   G SHF ++
Sbjct: 241 MQKLNAVNVTLLNQSVLLKDVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
             E  +I  +L+   SG   P    ++ G   K 
Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334


>gi|163802718|ref|ZP_02196608.1| chaperonin GroEL [Vibrio sp. AND4]
 gi|159173425|gb|EDP58247.1| chaperonin GroEL [Vibrio sp. AND4]
          Length = 340

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 147/274 (53%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +P  EE  +      DP+ D   + + G++H+Y +R L+ +   C + CR
Sbjct: 67  NPHDPLLRQVLPLSEEFEVHQGYSADPL-DEQGNAIPGLLHKYKNRALMIVKGGCAINCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CF R       KG   S    + +L Y+ +  +I EVI +GGDPL+     ++ +++ +
Sbjct: 126 YCFSRHFPYQDNKG---SKSVWQTSLDYVSQHPEINEVILSGGDPLMAKDSEIEWLIQAI 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
            +I H++ LR HSR+P+V P RI  +L   L+ +   + +  H NH  E + E  A +++
Sbjct: 183 EHIPHIKRLRIHSRLPVVIPARITDQLSHLLQASRLQIVLVTHINHADEINAELTAKMAK 242

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G+ LL+Q+VLLK +ND  E    L     +  I PYYLH  D   G +H+ ++  +
Sbjct: 243 LKQVGVTLLNQAVLLKDVNDSVEAQVTLNEALFDAGILPYYLHVLDKVQGAAHYFVSDTQ 302

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            ++I+  +  ++SG   P    ++ G   K  +D
Sbjct: 303 AKEIMRGVITRVSGYLVPKLTREIGGRPSKTPLD 336


>gi|307245529|ref|ZP_07527616.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307254485|ref|ZP_07536321.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258943|ref|ZP_07540674.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853588|gb|EFM85806.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306862535|gb|EFM94493.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866967|gb|EFM98824.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 333

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 138/261 (52%), Gaps = 11/261 (4%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           + NDP+  Q +   EE   +    +DP+ +  HSP   I+H+Y +R+L  + + C + CR
Sbjct: 64  DKNDPLFLQAMSAAEEFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCR 122

Query: 111 FCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           +CFRR      V S K         +  L YI   +++ EVIF+GGDPL+     L  ++
Sbjct: 123 YCFRRHFPYDEVKSGKAV------WQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLI 176

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
             L  I H++ LR H+R+P+V P RI  +L   L ++   V +  H NHP E  E     
Sbjct: 177 SALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADK 236

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           +++L  + ++LL+QSVLLKG+ND+ +IL  L     E  + PYYLH  D   G SHF + 
Sbjct: 237 LNQLRQSKVVLLNQSVLLKGVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIE 296

Query: 287 IEEGQKIVASLKEKISGLCQP 307
             +  +I   L+   SG   P
Sbjct: 297 DRQAAEIYKELQRITSGYLVP 317


>gi|77359438|ref|YP_339013.1| lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis TAC125]
 gi|76874349|emb|CAI85570.1| putative lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 308

 Score =  159 bits (401), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 143/274 (52%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           + NDP+  Q +P+ +E        +DP+ + +N  P  G++H+Y  R+L+     C V C
Sbjct: 35  DANDPLLLQVMPRHQEFLTKSGFNKDPLLEQSNQQP--GLLHKYKSRVLVMFKTGCAVNC 92

Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           R+CFRR     +    L+ +    AL+YI+  + I EVI +GGDPL+     +   L  L
Sbjct: 93  RYCFRRHFPYQENQ--LNKRSLLDALSYIKSDNNINEVILSGGDPLMAKDDAISWFLDEL 150

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             +  ++ +R H+R+P+V P RI  EL + L  +   +    H NH  E  ++  AA+ +
Sbjct: 151 EQLPQIKRMRIHTRLPVVIPARITDELCERLARSPLKIVFVNHINHANEIDDDFKAAMQK 210

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L   G++L +Q+V+LK +ND      NL     +  + PYYLH  D   G SHF ++ E+
Sbjct: 211 LKQVGVVLFNQAVILKDVNDTTAAQVNLSEALFDADVLPYYLHLLDKVEGASHFDISEEQ 270

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             KI+A L E + G   P  + ++ G   K  ID
Sbjct: 271 AIKIMAELLEALPGFLVPKLVREIGGEKSKTPID 304


>gi|119469128|ref|ZP_01612112.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7]
 gi|119447380|gb|EAW28648.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7]
          Length = 337

 Score =  158 bits (400), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 145/274 (52%), Gaps = 5/274 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           + NDP+  Q +P+ +E        +DP+ + +N  P  GI+H+Y  R+L+     C V C
Sbjct: 64  DANDPLLLQVMPRHQEFLKKSGFNKDPLLEQDNDQP--GILHKYKSRVLVMFKTGCAVNC 121

Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           R+CFRR     +    L+ K    AL YI+  + I EVI +GGDPL+     +   L  L
Sbjct: 122 RYCFRRHFPYQENQ--LNKKSLLDALCYIKSDTNINEVILSGGDPLMAKDDAISWFLDEL 179

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             +  ++ +R HSR+P+V P RI  EL   L+++   +    H NH  E   E  AA+ +
Sbjct: 180 EKLPQIKRMRIHSRLPVVIPARITDELCARLQKSPLKIVFINHINHANEIDGEFKAAMQK 239

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L +AG++LL+Q+V+LK +ND  +   NL     +  + PYYL+  D   G SHF +  E+
Sbjct: 240 LKHAGVMLLNQAVILKDVNDTVDAQVNLSEALFDADVLPYYLYLLDKVEGASHFDINEEQ 299

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             KI+A L + + G   P  + ++ G   K  ID
Sbjct: 300 AIKIMAELLKALPGFLVPKLVREIGGQKSKTPID 333


>gi|303250421|ref|ZP_07336619.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252226|ref|ZP_07534123.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307261137|ref|ZP_07542814.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|302650747|gb|EFL80905.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860148|gb|EFM92164.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306869167|gb|EFN00967.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 333

 Score =  158 bits (399), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/277 (33%), Positives = 142/277 (51%), Gaps = 11/277 (3%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A  +   + NDP+  Q +    E        +DP+ +  HSP   I+H+Y 
Sbjct: 48  FALRVPRAFAAKMQKGDKNDPLFLQAMSAAAEFLQAEGFVKDPL-EEQHSPAPNILHKYH 106

Query: 95  DRILLKLLHVCPVYCRFCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           +R+L  + + C + CR+CFRR      V S K         +  L YI   +++ EVIF+
Sbjct: 107 NRLLFMIKNSCAINCRYCFRRHFPYDDVKSGKAV------WQQGLDYIAAHTELEEVIFS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+     L  ++  L  I H++ LR H+R+P+V P RI  +L   L ++   V + 
Sbjct: 161 GGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
            H NHP E  E     +++L  A ++LL+QSVLLKG+ND+ +IL  L     E  + PYY
Sbjct: 221 THINHPNEVDEVLADKLNQLRQANVVLLNQSVLLKGVNDNAQILKALSNKLFESGVLPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           LH  D   G SHF +   +  +I   L+   SG   P
Sbjct: 281 LHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYLVP 317


>gi|148652299|ref|YP_001279392.1| lysine 2,3-aminomutase YodO family protein [Psychrobacter sp.
           PRwf-1]
 gi|148571383|gb|ABQ93442.1| L-lysine 2,3-aminomutase [Psychrobacter sp. PRwf-1]
          Length = 372

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 83/276 (30%), Positives = 144/276 (52%), Gaps = 2/276 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           + NDP+  Q +P K+E   +     DP+ +N H+P+KG++H+Y  R+L+ +   C ++CR
Sbjct: 92  DANDPLLLQVLPNKQEQTQVTGYVSDPLAENAHNPIKGLLHKYRSRVLVTVTGACAIHCR 151

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFR+      +  +  S        YI++  +I EVI +GGDPL ++++RL   L+ L 
Sbjct: 152 YCFRQHF--DYQANLPKSDQLRLIQDYIRQHPEINEVILSGGDPLSVTNRRLFLWLQALE 209

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            +  +  +R H+R+ IV P R++ EL+  L+ +   + + +H NH  E        +   
Sbjct: 210 DLPQINTIRLHTRLSIVIPDRLDNELLDRLEHSRCRIVMVVHTNHANEIDNHTAKLLQHA 269

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
              GI LL+Q+VLL G+ND  +    L     E  + PYYLH  D  AG +HF +  ++ 
Sbjct: 270 RQKGITLLNQTVLLAGVNDGLKQQVALSERLFEAGVLPYYLHLLDKVAGAAHFDIAQKQA 329

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
             +   +   + G   P  + +LP    K  +D ++
Sbjct: 330 IDLYWQMLAHLPGYLVPKLVQELPHKPFKTPVDLYH 365


>gi|90407173|ref|ZP_01215361.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3]
 gi|90311749|gb|EAS39846.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3]
          Length = 338

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 144/270 (53%), Gaps = 3/270 (1%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           NDP+ RQ +P  +E   +     DP+ ++++S ++G++H+Y  RILL L   C V CR+C
Sbjct: 69  NDPLLRQVLPITDEDKQVEGYSIDPLLEHDNS-IQGVLHKYKSRILLVLKSGCAVNCRYC 127

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR      +   L+ K     + Y++    + EVI +GGDPL+     L  V+  L+ +
Sbjct: 128 FRRHF--PYQDNNLNKKQLAEVILYLKAHPDVNEVILSGGDPLMSKDDFLDYVINELQQL 185

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
           K ++ LR H+R+P+V PQR+   L + LK     V   +H NH +E  +    A+ +L +
Sbjct: 186 KQLKRLRIHTRLPVVIPQRVTDRLCEILKATRLQVVFVVHINHAHEIDKAFKIAMLKLHH 245

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AGI LL+QSVLL+G+ND+ E L  L     +  I PYYL   D   G  HF L  ++ + 
Sbjct: 246 AGIQLLNQSVLLRGVNDNAEALVALSEALFDAHILPYYLFLLDKVQGAQHFDLEEQKAKA 305

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           ++  +   + G   P    ++ G   K  I
Sbjct: 306 LLLEISAALPGYLVPRLSREIAGEKSKTLI 335


>gi|219870442|ref|YP_002474817.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis
           SH0165]
 gi|219690646|gb|ACL31869.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis
           SH0165]
          Length = 337

 Score =  157 bits (397), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 134/258 (51%), Gaps = 11/258 (4%)

Query: 54  DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
           DP+  Q I  +EE   +    +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CF
Sbjct: 68  DPLFLQAITLQEEFTNVDGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCF 126

Query: 114 RREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           RR      V S K T       + +L YI+  S++ EVI +GGDPL+     +  +   L
Sbjct: 127 RRHFPYDEVKSGKAT------WQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQL 180

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H+  +R HSR+P+V P RI  EL + L ++   V +  H NH  E  +     + +
Sbjct: 181 EQISHINTVRIHSRLPVVIPNRITDELCERLSQSRLKVVLVTHINHANEIDKIFAEKMQK 240

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  + ++LL+QSVLLKGIND+ + L  L        I PYYLH  D  AG SHF +    
Sbjct: 241 LKQSNVVLLNQSVLLKGINDNAQTLKALSDKLFRYGILPYYLHLLDKVAGASHFYIEDSR 300

Query: 290 GQKIVASLKEKISGLCQP 307
             +I   L+   SG   P
Sbjct: 301 AFEIYRELQRITSGYLVP 318


>gi|332534315|ref|ZP_08410158.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332036225|gb|EGI72698.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 329

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 144/278 (51%), Gaps = 5/278 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVC 105
           I   +PNDP+  Q +P+ +E        +DP+ + +N  P  G++H+Y  R+L+     C
Sbjct: 52  IRKGDPNDPLLLQVMPRHQEFLTKSGFNKDPLLEQDNDQP--GLLHKYKSRVLVMFKTGC 109

Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
            V CR+CFRR     +    L+ K     L+YI+  S I EVI +GGDPL+     +   
Sbjct: 110 AVNCRYCFRRHFPYQENQ--LNKKSLLETLSYIKSDSNINEVILSGGDPLMAKDDAISWF 167

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225
           L  L  +  ++ +R HSR+P+V P R+  EL + L ++   +    H NH  E   +  A
Sbjct: 168 LDELEQLPQIKRMRIHSRLPVVIPTRVTDELCERLAKSPLKIIFINHINHANEIDADFKA 227

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           A+ +L  A + LL+Q+V+LK +ND  +   NL     +  + PYYL+  D   G SHF +
Sbjct: 228 AMQKLKQANVTLLNQAVILKDVNDTLDAQINLSEALFDADVLPYYLYLLDKVEGASHFDI 287

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             E+  KI+A L + + G   P  + ++ G   K  ID
Sbjct: 288 NEEDAIKIMAELLKALPGFLVPKLVREIGGQKSKTPID 325


>gi|171680131|ref|XP_001905011.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939692|emb|CAP64918.1| unnamed protein product [Podospora anserina S mat+]
          Length = 491

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 22/304 (7%)

Query: 36  SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
           +I +TP I + +N  NP +DPI RQF+P K  L  +P+  +   D + +   SP+KG+VH
Sbjct: 146 AIRMTPYILSRVNWENPRHDPIIRQFLPLKSVL--IPDHPKLALDSLHEEADSPVKGLVH 203

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIW 145
           RY D+ L     VCP YC FC R   VG+   TV  +      +  E A AYI+    + 
Sbjct: 204 RYSDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIENTPALQ 263

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCLKE 202
           +++ +GGD   L   +L+ +   L  + +++  RF S+   V P RI  E    +  L +
Sbjct: 264 DIVVSGGDSYYLQPDQLRMIGDRLIGMPNIKRFRFASKGLAVAPSRILDESDGWVNALID 323

Query: 203 AGKPVYIA-------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
                  A        H NHP E S  +  A  +L   G+++ +Q+VLL+G+NDD + ++
Sbjct: 324 ISNKAKKAGKAVAWHTHFNHPNEISWISKDASQKLFEEGVMVRNQTVLLRGVNDDVDTMS 383

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            L+R   + ++ PYY++  D+     H R  ++    + A ++  I+G   P +++DLP 
Sbjct: 384 KLIRDLADNKVFPYYVYQCDMVERVEHLRTPLQTILDLEARIRGSIAGFMMPQFVVDLPA 443

Query: 316 GYGK 319
           G GK
Sbjct: 444 GGGK 447


>gi|167947045|ref|ZP_02534119.1| hypothetical protein Epers_11032 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 316

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 149/255 (58%), Gaps = 8/255 (3%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI---LPEERED 76
           + +++ + ++E+   + + +     +L+N ++ NDPI +  +P ++EL +   + E  +D
Sbjct: 37  LSEDEEEVLREVVGQHPMNIPRYYLSLLNEYDTNDPIRKLALPSEDELIVAGSMGETTKD 96

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           P GD+ H+   G++H+YP   L+     C +YCR CFR+ +VG      +  ++ + A  
Sbjct: 97  PYGDDKHNKGNGVLHKYPYSALIVATDYCSMYCRHCFRKAIVGLPNDKTV--ENFQRAAT 154

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPE 195
           YI+E  +I  VI +GGDPL+++ +R++K+L++L  I HV  +R  +R P+V P R  + +
Sbjct: 155 YIREHKEITNVIISGGDPLLINTRRIKKILESLVDIDHVNYVRLGTRTPVVYPMRFFDDD 214

Query: 196 LIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
           L++C +E    K +Y+  H NH  E +  A  A+ R+   G+ + +Q+VLL+G+ND    
Sbjct: 215 LLKCFEEFNKHKTLYLPTHFNHANEITNIAKEAVLRIRQTGVTVNNQAVLLEGVNDSASD 274

Query: 254 LANLMRTFVELRIKP 268
           + NLM   V +  KP
Sbjct: 275 IENLMNGLVTIWRKP 289


>gi|307256695|ref|ZP_07538474.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864743|gb|EFM96647.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 333

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 138/261 (52%), Gaps = 11/261 (4%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           + NDP+  Q +   EE   +    +DP+ +  HSP   I+H+Y +R+L  + + C + CR
Sbjct: 64  DKNDPLFLQAMSAAEEFLQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCR 122

Query: 111 FCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           +CFRR    + V S K         +  L YI   +++ EVIF+GGDPL+     L  ++
Sbjct: 123 YCFRRHFPYDEVKSGKAV------WQQGLDYIAAHTELEEVIFSGGDPLMAKDNELDWLI 176

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
             L  I H++ LR H+R+P+V P RI  +L   L ++   V +  H NHP E  E     
Sbjct: 177 SALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADK 236

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           +++L  A ++LL+QSVLLKG+ND+ + L  L     +  + PYYLH  D   G SHF + 
Sbjct: 237 LNQLRQANVVLLNQSVLLKGVNDNAQTLKALSDKLFDSGVLPYYLHLLDRVEGASHFFIE 296

Query: 287 IEEGQKIVASLKEKISGLCQP 307
             +  +I   L+   SG   P
Sbjct: 297 DRQAAEIYKELQRISSGYLVP 317


>gi|270157927|ref|ZP_06186584.1| KamA family protein [Legionella longbeachae D-4968]
 gi|289163802|ref|YP_003453940.1| lysine aminomutase [Legionella longbeachae NSW150]
 gi|269989952|gb|EEZ96206.1| KamA family protein [Legionella longbeachae D-4968]
 gi|288856975|emb|CBJ10789.1| putative lysine aminomutase [Legionella longbeachae NSW150]
          Length = 327

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 141/270 (52%), Gaps = 2/270 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+  Q +    EL    E   DP+ +++++ ++G++H+Y  R+LL +  VC V CR
Sbjct: 57  NPHDPLLLQVLASGYELQGSEEYSSDPLDEHSNNSVRGLLHKYHGRVLLTMTGVCAVNCR 116

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR      +         +    YI + + I EVI +GGDPL+ S   L ++++ L 
Sbjct: 117 YCFRRHF--PYQANNPGRAGLKHICDYIAQDTSITEVILSGGDPLLASDVVLGELIEQLE 174

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H+  LR H+R+P+V P+RI+  L+  LK+      I +H NH  E  +     +  L
Sbjct: 175 QIPHLHTLRIHTRIPVVFPERIDLNLLSLLKKVKLNKVIVLHCNHAQELDDSVRPVLHEL 234

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
                 LL+Q+VLL GIND+  +LA+L +T     + PYYLH  D   G +HF L     
Sbjct: 235 RRIDCHLLNQTVLLAGINDNAHVLADLSQTLFSFGVLPYYLHVLDKVKGAAHFDLPFNTV 294

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           + I   L+  + G   P  + + PG   K 
Sbjct: 295 KGIYQQLQNLLPGYMLPRLVREEPGKSSKT 324


>gi|109896769|ref|YP_660024.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
           atlantica T6c]
 gi|109699050|gb|ABG38970.1| L-lysine 2,3-aminomutase [Pseudoalteromonas atlantica T6c]
          Length = 341

 Score =  156 bits (394), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 145/283 (51%), Gaps = 7/283 (2%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKL 101
            A  I   +PND + +Q  P ++E         DP+ +  N  P  G++H+Y  R+LL +
Sbjct: 59  FAARIKKGDPNDALFKQVFPSEKEFLTDLNYVLDPLQEQQNEKP--GVLHKYKSRVLLLV 116

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
              C V CR+CFRR    S     L+  + +  L YI++   I EVI++GGDPL+     
Sbjct: 117 RGGCAVNCRYCFRRHFPYSDNH--LNKHEWQETLDYIKQDKNINEVIYSGGDPLMAKDDF 174

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL-KEAGKPVYIAIHANHPYEFS 220
           L  +   +  I H++ +R H+R+P+V P RI P+LI+   K   KPV + +H NHP E  
Sbjct: 175 LAWLTDEIAEITHIKRIRIHTRLPVVIPARITPQLIEWFTKTRLKPVMV-LHINHPQEID 233

Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
                 +  L  AG+ LL+Q VLLK IND  ++   L     +  + PYYLH  D   G 
Sbjct: 234 FALQEVLQELTKAGVTLLNQGVLLKDINDSADVQVALSERLFDAGVMPYYLHVMDKVQGA 293

Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            HF    +  + I+A + +++ G   P  + ++ G  GK  ID
Sbjct: 294 QHFDQDDKIAKDIMAKMIKRLPGFLVPKLVREIGGQPGKTPID 336


>gi|145631426|ref|ZP_01787196.1| DNA repair protein RecO [Haemophilus influenzae R3021]
 gi|144982963|gb|EDJ90472.1| DNA repair protein RecO [Haemophilus influenzae R3021]
          Length = 297

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 128/249 (51%), Gaps = 2/249 (0%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +S+ +     + I   NP DP+  Q +    E         DP+ + N + +  I+H+Y 
Sbjct: 51  FSLRVPQPFIDKIEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQ 110

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +R+L      C V CR+CFRR     +     + K  + AL YI   S+I EVIF+GGDP
Sbjct: 111 NRLLFMAKGGCAVNCRYCFRRHFPYDENPG--NKKSWQLALDYIATHSEIEEVIFSGGDP 168

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L+     L  ++K L  I H+Q LR H+R+P+V PQRI  E    L E+     +  H N
Sbjct: 169 LMAKDHELAWLIKHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHIN 228

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           HP E  +    A+ +L    + LL+QSVLLK +NDD +IL  L     +  I PYYLH  
Sbjct: 229 HPNEIDQIFANAMQKLNAVNVTLLNQSVLLKSVNDDAQILKILSDKLFQTGILPYYLHLL 288

Query: 275 DLAAGTSHF 283
           D   G SHF
Sbjct: 289 DKVQGASHF 297


>gi|167854986|ref|ZP_02477761.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755]
 gi|167853943|gb|EDS25182.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755]
          Length = 337

 Score =  155 bits (393), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 134/258 (51%), Gaps = 11/258 (4%)

Query: 54  DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
           DP+  Q I  +EE   +    +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CF
Sbjct: 68  DPLFLQAITLQEEFTNVDGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCF 126

Query: 114 RREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           RR      V S K T       + +L YI+  S++ EVI +GGDPL+     +  +   L
Sbjct: 127 RRHFPYDEVKSGKAT------WQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQL 180

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
             I H+  +R HSR+P+V P RI  EL + L ++   V +  H NH  E  +     + +
Sbjct: 181 EQISHINTVRIHSRLPVVIPNRITDELCERLLQSRLKVVLVTHINHANEIDDIFAEKMQK 240

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           L  + ++LL+QSVLLKGIND+ + L  L        I PYYLH  D  AG SHF +    
Sbjct: 241 LKQSNVVLLNQSVLLKGINDNAQTLKALSDKLFRNGILPYYLHLLDKVAGASHFYIEDSR 300

Query: 290 GQKIVASLKEKISGLCQP 307
             +I   L+   SG   P
Sbjct: 301 AFEIYRELQRITSGYLVP 318


>gi|315125467|ref|YP_004067470.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913]
 gi|315013980|gb|ADT67318.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913]
          Length = 308

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 140/275 (50%), Gaps = 7/275 (2%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPI--GDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
           + NDP+  Q +P+ +E        +DP+   DNN     G++H+Y  R+L+     C V 
Sbjct: 35  DANDPLLLQVMPRHQEFLTKSGFNKDPLLEQDNNQP---GLLHKYKSRVLVMFKTGCAVN 91

Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           CR+CFRR     +    L+ +    AL+YIQ    I EVI +GGDPL+     +   L  
Sbjct: 92  CRYCFRRHFPYQENQ--LNKRSLIDALSYIQADKNINEVILSGGDPLMAKDDAISWFLDE 149

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
           L  I  ++ +R HSR+P+V P RI  +L + L ++   V    H NH  E   +   A++
Sbjct: 150 LEQIPQIKRMRIHSRLPVVIPARITEQLCERLAKSPLKVIFVNHINHANEIDSDFKNAMN 209

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
            L  A ++LL+Q+V+LK +ND  +   NL     +  + PYYLH  D   G SHF +   
Sbjct: 210 MLKQANVLLLNQAVILKDVNDTVDAQINLSEALFDTDVMPYYLHLLDKVEGASHFDIDEA 269

Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +  KI+A L E + G   P  + ++ G   K  ID
Sbjct: 270 QAIKIMAELLEALPGFLVPKLVREIGGQKSKTPID 304


>gi|240949712|ref|ZP_04754047.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305]
 gi|240295970|gb|EER46646.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305]
          Length = 333

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/269 (35%), Positives = 135/269 (50%), Gaps = 11/269 (4%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
            A  +   + NDP+  Q +    E   +    +DP+ D  HSP   I+H+Y +R+L  + 
Sbjct: 56  FAERMQKGDKNDPLFLQAMTSSAEFTQVEGFTKDPL-DEQHSPAPNILHKYHNRLLFMVK 114

Query: 103 HVCPVYCRFCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + C + CR+CFRR    E V S K         + +L YI E  +I EVI +GGDPL+  
Sbjct: 115 NSCAINCRYCFRRHFPYEDVKSGKSA------WQQSLQYIAEHPEIEEVILSGGDPLMAK 168

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
            + L  +L  L  I HV+ LR H+R+P+V P RI  +L     ++   V +  H NH  E
Sbjct: 169 DEELDWILTALEKITHVKTLRIHTRLPVVIPNRITAQLCLRFADSRLNVVMVTHINHANE 228

Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
                   I++L  A +ILL+QSVLLKG+ND    L  L      + I PYYLH  D   
Sbjct: 229 IDAVLANKIAKLKQADVILLNQSVLLKGVNDSAITLKVLSDKLFSIGILPYYLHLLDKVE 288

Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           G SHF +  E    I   L++  SG   P
Sbjct: 289 GASHFFVEDEIAFSIYKELQKISSGYLVP 317


>gi|124485170|ref|YP_001029786.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
 gi|124362711|gb|ABN06519.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
          Length = 368

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 168/334 (50%), Gaps = 15/334 (4%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           ++ K +TS   L N   +  ++ + ++ +++ +         +LI+  +  DPI    +P
Sbjct: 1   MKPKYITSISALDNLVGLAPKEREMMERVTDVFPFRANDYYLSLIDWKDRRDPIRAIIVP 60

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-Q 121
              EL        DP  + +++   G+ H+Y    LL L  VC   CRFCFR+ +  S +
Sbjct: 61  DPRELE--SGGSNDPSCEKDYTKKPGLQHKYDQTGLLLLTDVCGGICRFCFRKRLFMSCE 118

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           + TV   +D    +AYI+E ++I  V+ TGGDPL L  + L+ VL+ LR I HV I+R  
Sbjct: 119 RETV---RDVSENIAYIREHTEITNVLLTGGDPLTLDTRHLESVLRELREIPHVSIIRIG 175

Query: 182 SRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGII 236
           S++   +P RI  + EL+  L     P   +Y+  H NHP E ++ +I A   L  A +I
Sbjct: 176 SKMLAYNPYRILNDAELLSVLSRYSTPEKRIYLMAHFNHPNEITDVSIQAAEALQKADVI 235

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           +++Q+ +L GIN + E L  L R      I PYY+     A G   F++ +EE   IV  
Sbjct: 236 VVNQTPILNGINAESETLTTLFRKLSFAGIAPYYVFQCRPATGNGLFQVPVEESYDIVQG 295

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI---DTHNI 327
             +  SGL +    + +    GKV++   D  NI
Sbjct: 296 AWKNCSGLAKRARFI-MSHSTGKVEVVGKDAENI 328


>gi|53729180|ref|ZP_00134024.2| COG1509: Lysine 2,3-aminomutase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208156|ref|YP_001053381.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae L20]
 gi|190149985|ref|YP_001968510.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303252405|ref|ZP_07338571.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247647|ref|ZP_07529688.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307263313|ref|ZP_07544931.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126096948|gb|ABN73776.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|189915116|gb|ACE61368.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302648864|gb|EFL79054.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306855815|gb|EFM87977.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306871375|gb|EFN03101.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 333

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 142/277 (51%), Gaps = 11/277 (3%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A  +   + NDP+  Q +    E        +DP+ +  HSP   I+H+Y 
Sbjct: 48  FALRVPRAFAAKMQKGDKNDPLFLQAMSAAAEFLQAEGFVKDPL-EEQHSPAPNILHKYH 106

Query: 95  DRILLKLLHVCPVYCRFCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           +R+L  + + C + CR+CFRR      V S K         +  L YI   +++ EVIF+
Sbjct: 107 NRLLFMIKNSCAINCRYCFRRHFPYDDVKSGKAV------WQQGLDYIAAHTELEEVIFS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+     L  ++  L  I H++ LR H+R+P+V P RI  +L   L ++   V + 
Sbjct: 161 GGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
            H NHP E  E     +++L  A ++LL+QSVLLKG+ND+ + L  L     +  + PYY
Sbjct: 221 THINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLKGVNDNAQTLKVLSDKLFDSGVLPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           LH  D   G SHF +  ++  +I   L+   SG   P
Sbjct: 281 LHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYLVP 317


>gi|162450720|ref|YP_001613087.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
 gi|161161302|emb|CAN92607.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
          Length = 461

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/303 (31%), Positives = 158/303 (52%), Gaps = 21/303 (6%)

Query: 36  SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
           S+ ++P + +LI+ ++P  DP+  QFIP       LP+  +   D + +   +P+ G+ H
Sbjct: 97  SVRVSPYMLSLIDWNDPYGDPLRTQFIPLASRF--LPDHPKLGLDSLHERADAPVPGLTH 154

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKSQIW 145
           RY D+ L   L  CPVYCRFC R   VG     V      +  +  + A AYI  + ++ 
Sbjct: 155 RYADKALFLPLDTCPVYCRFCTRSYAVGIDTEEVEKTHFKVDEERWKRAYAYIASRPELE 214

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL--- 200
           +++ +GGD   L  ++L  + +TL  + ++Q +R  ++ P V PQ+I  + E I  +   
Sbjct: 215 DIVVSGGDAYNLRPEQLGAIGETLLRMPNIQRIRLATKGPAVMPQKILTDDEWIDAVTRT 274

Query: 201 ----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
               ++  K V I  H NHP E +     A+++L   GI + +QSVL +G+ND PE +  
Sbjct: 275 VELGRKLHKEVVIHTHFNHPNEITGVTRDAMNKLFERGITVRNQSVLQRGVNDTPETMKL 334

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L++    + + PYY++  DL  G    R T+  G  I   ++   +G   P +++D PGG
Sbjct: 335 LVKRLGHVHVHPYYVYIHDLVRGVEDLRTTLATGLTIEKHVRGSTAGFNTPTFVVDAPGG 394

Query: 317 YGK 319
            GK
Sbjct: 395 GGK 397


>gi|165976091|ref|YP_001651684.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165876192|gb|ABY69240.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 333

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 142/277 (51%), Gaps = 11/277 (3%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +++ +    A  +   + NDP+  Q +    E        +DP+ +  HSP   I+H+Y 
Sbjct: 48  FALRVPRAFAAKMQKGDKNDPLFLQAMSAAAEFLQAEGFVKDPL-EEQHSPAPNILHKYH 106

Query: 95  DRILLKLLHVCPVYCRFCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           +R+L  + + C + CR+CFRR      V S K         +  L YI   +++ EVIF+
Sbjct: 107 NRLLFMIKNSCAINCRYCFRRHFPYDDVKSGKAV------WQQGLDYIAAHTELEEVIFS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+     L  ++  L  I H++ LR H+R+P+V P RI  +L   L ++   V + 
Sbjct: 161 GGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
            H NHP E  E     +++L  A ++LL+QSVLLKG+ND+ + L  L     +  + PYY
Sbjct: 221 THINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLKGVNDNVQTLKVLSDKLFDSGVLPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           LH  D   G SHF +  ++  +I   L+   SG   P
Sbjct: 281 LHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYLVP 317


>gi|256827853|ref|YP_003156581.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577029|gb|ACU88165.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
           baculatum DSM 4028]
          Length = 520

 Score =  152 bits (385), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 170/339 (50%), Gaps = 18/339 (5%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QLRH  +   + L     +  + I+++  ++  Y + LTP  A+LI P   NDP+  Q +
Sbjct: 158 QLRH-AIEDVETLSKVVDLPAKAIEDVLRVTRTYRMRLTPYYASLILPGQVNDPVLLQAV 216

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  E ++      E P    +HSP + I   YP  + +K  ++C +YC  C R   +G+ 
Sbjct: 217 PTGEMVD--NAGVEIPPVAADHSPARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIGA- 273

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           K  +   +    AL YI+   +I +V+ TGGD L+L +  L+ +L  L  I+HV++ R  
Sbjct: 274 KDRLYGKEAYGEALEYIRANPEIRDVLITGGDSLVLPNSMLEWLLGQLDAIEHVRMKRLG 333

Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
           +R+P+  PQRI+ EL+  L+ +   KP+ +    N   E +  + AA   ++     +++
Sbjct: 334 TRIPVTTPQRIDSELLDILEASSDKKPLRVVTQINTAQEITPVSKAAFQAISKRVAAVMN 393

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYL-----HHPDLAAGTSHFRLTIEEGQKIV 294
           Q+VLLKGIND    +  L  T  E  ++PYY+      +P       H R+ +  GQ I+
Sbjct: 394 QAVLLKGINDSSVKMWKLCETIQEAYVRPYYVFNCSYRNPQF----KHLRVPVAVGQSII 449

Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
            S+   ISG   P YI       GK+ +   N+ + G G
Sbjct: 450 ESMYGNISGDAIPRYI---ATAGGKIPLHRTNVLEHGQG 485


>gi|291280226|ref|YP_003497061.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1]
 gi|290754928|dbj|BAI81305.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1]
          Length = 519

 Score =  152 bits (385), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/301 (32%), Positives = 158/301 (52%), Gaps = 20/301 (6%)

Query: 25  IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
           I ++  ++ HY + LTP  A+LI P N NDP+  Q +P  E ++ +  E   P    +HS
Sbjct: 177 ITDVLRVTKHYRMRLTPYYASLIMPGNINDPVLLQSVPTGEMVDNVGVEI--PPVAADHS 234

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           P + I   YP  + +K  ++C +YC  C R   +G +K  + + K    AL YI+    I
Sbjct: 235 PARLIDQFYPRVVTIKSTNMCAMYCTHCLRIAHIG-KKDRIYNKKAYLEALEYIKNNKNI 293

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            +V+ TGGD  +L +  ++ +L+ L  I HV++ R  +R+P+  PQR++ EL+  L+E+ 
Sbjct: 294 RDVLVTGGDAFVLPNSLIRWILEELDKIDHVKMKRLGTRIPVTTPQRVDQELLDILEESN 353

Query: 205 --KPVYIAIHANHPYE---FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
             KP+ +    N   E    S+E    IS+  +A   +L+Q+VLL+GIND    +  L  
Sbjct: 354 DKKPLRVVTQINTAQEITPISKEVFKQISKRVSA---VLNQAVLLRGINDSKVKMWKLCE 410

Query: 260 TFVELRIKPYYL-----HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           T  E  ++PYY+      +P  A    H R+ ++ GQ I+  +   ISG   P YI    
Sbjct: 411 TIQEAYVRPYYVFNCSYRNPQFA----HMRVPVQVGQDIIEGMYGNISGDAIPRYIATAG 466

Query: 315 G 315
           G
Sbjct: 467 G 467


>gi|83648059|ref|YP_436494.1| lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396]
 gi|83636102|gb|ABC32069.1| Lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396]
          Length = 348

 Score =  152 bits (384), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 141/272 (51%), Gaps = 2/272 (0%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P+DP+  Q +P   E   +     DP+ + +++  KGI+ +Y  R LL     C ++CR
Sbjct: 77  DPSDPLLLQVLPLHLEQQEMIGYSADPLSEADYTASKGILQKYHGRALLITTSACAIHCR 136

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    S+     S    + ALA +     + E+I +GGDPL+L++  L ++L  + 
Sbjct: 137 YCFRRHFPYSEHRQ--SRAQWKEALATLPGDGGVSEIILSGGDPLMLNNPVLDELLTLIA 194

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            +  +  +R H+R+PI+ P RI+  L+  L        + IHANH  E       A++RL
Sbjct: 195 ELPQISKVRLHTRLPIMLPDRIDQGLLDLLSNRPFKTIMVIHANHGAELDASVEKALARL 254

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
                ++L+Q+VLLKG+NDD   LA L     E  + PYYLH  D   G +HF    E  
Sbjct: 255 RPVVHMMLNQTVLLKGVNDDSSTLAALSERLFECGVTPYYLHQLDKVQGAAHFDCGDERL 314

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             ++ +L+ K+ G   P  + ++PG   K  I
Sbjct: 315 SSLMQALRAKLPGYLVPRLVREIPGAPSKTPI 346


>gi|223041468|ref|ZP_03611671.1| hypothetical protein AM202_0087 [Actinobacillus minor 202]
 gi|223017726|gb|EEF16133.1| hypothetical protein AM202_0087 [Actinobacillus minor 202]
          Length = 333

 Score =  152 bits (384), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 92/261 (35%), Positives = 133/261 (50%), Gaps = 11/261 (4%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           + NDP+  Q +    E   +    +DP+ +  HSP   I+H+Y +R+L  + + C + CR
Sbjct: 64  DKNDPLFLQAMTSSSEFTQVEGFIKDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCR 122

Query: 111 FCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           +CFRR    E V S K         + +L YI E  +I EVI +GGDPL+   + L  +L
Sbjct: 123 YCFRRHFPYEDVKSGKTV------WQQSLQYIAEHPEIEEVILSGGDPLMAKDEELDWIL 176

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
             L  I HV+ LR H+R+P+V P RI  +L     ++   V +  H NH  E        
Sbjct: 177 TALEKINHVKTLRIHTRLPVVIPNRITSQLCLRFADSRLNVVMVTHINHANEIDTVLANK 236

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           ++ L  +G++LL+QSVLLKG+ND    L  L      + I PYYLH  D   G SHF + 
Sbjct: 237 MAELKQSGVVLLNQSVLLKGVNDSAITLKALSDKLFSIGILPYYLHLLDKVEGASHFFVE 296

Query: 287 IEEGQKIVASLKEKISGLCQP 307
            E    I   L++  SG   P
Sbjct: 297 DEVAFSIYKELQKISSGYLVP 317


>gi|298528426|ref|ZP_07015830.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298512078|gb|EFI35980.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 521

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/298 (32%), Positives = 158/298 (53%), Gaps = 14/298 (4%)

Query: 25  IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
           ++E+  ++  Y + LTP  A LI P + +DP+  Q +P  E ++    E   P    +HS
Sbjct: 180 LEEVGRVTKDYRMRLTPYYAGLIMPESLDDPVLLQSVPTGEMVDNAGVEM--PPVAADHS 237

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           P + I   YP  + +K  ++C +YC  C R   +G +K  +   +    AL YI+   +I
Sbjct: 238 PARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIG-KKDRIYPEQAYSEALDYIRRDRRI 296

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            +V+ TGGD  +L  K L+ +L  L  ++HV+I R  +R+P+  PQR++ EL+  L+E+ 
Sbjct: 297 RDVLITGGDAFMLPDKVLRYMLSELDGMEHVRIKRLGTRIPVTTPQRVDQELLDILEESN 356

Query: 205 --KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
             KPV +    N   E +  +  A  R++ A   +L+Q+VLLKGIND    +A+L  T  
Sbjct: 357 DKKPVRVVTQINTAQEITPVSREAFRRISKAVSAVLNQAVLLKGINDSFVKMAHLCETIQ 416

Query: 263 ELRIKPYYL-----HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
           E  ++PYY+      +P      SH R+ +E+G+ IV  +   ISG   P YI    G
Sbjct: 417 EAYVRPYYIFNCSYRNPQF----SHLRVPVEKGRDIVEGMYGNISGDAIPRYIATAGG 470


>gi|262193506|ref|YP_003264715.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
           DSM 14365]
 gi|262076853|gb|ACY12822.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
           DSM 14365]
          Length = 473

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/308 (30%), Positives = 163/308 (52%), Gaps = 17/308 (5%)

Query: 36  SIALTPVIANLINPHNP-NDPIARQFIPQKEELNIL-PEEREDPIGDNNHSPLKGIVHRY 93
           S+ ++P + +LI+  +P  DP+  QFIP    L    P+   D + +   +P+ G+ HRY
Sbjct: 95  SVRVSPYLLSLIDWDHPYEDPLRTQFIPLGSRLTQDHPKLSFDSLHEQADAPVPGLTHRY 154

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKD-TEAALAYIQEKSQIWEV 147
            D+ L   L  CPVYCRFC R   VG      +K ++ + +D  + A  Y+  + ++ ++
Sbjct: 155 VDKALFLTLDTCPVYCRFCTRSYAVGIDTEDVEKVSLKAREDRWDQAFRYVAARPELEDI 214

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK---E 202
           + +GGD   L  ++++ + +TL  + +++ +RF ++ P V PQ++  + E +  L    E
Sbjct: 215 VISGGDSYQLKARQIRHIGETLLGMDNIRRIRFATKGPAVMPQKLITDTEWLDALTGIVE 274

Query: 203 AG----KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            G    K V +  H NHP E +     A+  L   GI + +QSVL +G+ND  E +  L+
Sbjct: 275 LGRKLHKEVALHTHFNHPNEITAITKQAMDILFERGITVRNQSVLQRGVNDTVETMQLLV 334

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
           +    L ++PYY++  D+  G    R TI+ G  I   ++   +G   P +++D PGG G
Sbjct: 335 KRLSYLNVQPYYVYMHDMVKGVEDLRTTIQTGLDIEKHVRGITAGFNTPTFVVDAPGGGG 394

Query: 319 KVKIDTHN 326
           K  I ++ 
Sbjct: 395 KRAIHSYE 402


>gi|298528428|ref|ZP_07015832.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298512080|gb|EFI35982.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 370

 Score =  150 bits (380), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 153/286 (53%), Gaps = 17/286 (5%)

Query: 25  IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
           +D  +  SN Y ++L       +N  +P+DPI R  IP  +EL+     R D   + ++S
Sbjct: 28  MDTFEFRSNEYYLSL-------VNWDDPDDPIRRIIIPSVQELDQWG--RLDASNEQSYS 78

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQ 143
            L G+ H+Y    +      C  +CR+CFR+ + +  ++  VL+  D +AA  Y++   +
Sbjct: 79  VLPGLQHKYVSTAVFLASDACGGFCRYCFRKRLFIHPEQREVLT--DLDAACDYVRNHPE 136

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK 201
           I  V+ TGGD L+LS  RL+K++  LR I HV+I+R  +++    P R+  + EL++ +K
Sbjct: 137 INNVLITGGDGLMLSTSRLEKIISRLRGIDHVKIIRIGTKLLSYSPYRVLNDQELLEMVK 196

Query: 202 EAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
           +   P   +Y   H  HP E ++ ++ A  RL  AG IL +Q+ +L+G+NDDP++L  L 
Sbjct: 197 KYSLPDKRIYFMTHYTHPREMTDVSLEACDRLIKAGGILCNQTPMLRGVNDDPQVLGELF 256

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
                + + PYY+       G   + + +EE   +  + +   SGL
Sbjct: 257 NRLSYMGVAPYYIFICRPTVGNKPYAVPVEEAFNVYQNARSMCSGL 302


>gi|293391874|ref|ZP_06636208.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952408|gb|EFE02527.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 343

 Score =  149 bits (377), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 134/259 (51%), Gaps = 5/259 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           N  DP+  Q +   +E        +DP+ +  + + +  I+H+Y +R+L  +   C V C
Sbjct: 71  NARDPLFLQVMSFADEFLQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNC 130

Query: 110 RFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           R+CFRR     Q KG   + ++ + AL YI    +I EVI +GGDPL+     +  ++K 
Sbjct: 131 RYCFRRHFPYDQNKG---NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKH 187

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
           L  + H+  LR HSR+P+V PQRI  +    L +      +  H NH  E  E+   A+ 
Sbjct: 188 LENLPHLTRLRIHSRLPVVIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMD 247

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
           +L N G++LL+QSVLLK +NDD  IL  L      + I PYYLH  D   G +HF L   
Sbjct: 248 KLKNCGVVLLNQSVLLKNVNDDAHILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDA 307

Query: 289 EGQKIVASLKEKISGLCQP 307
           +  +I   L+   SG   P
Sbjct: 308 QALRIYKQLQRITSGYLVP 326


>gi|261868588|ref|YP_003256510.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413920|gb|ACX83291.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 343

 Score =  149 bits (376), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 90/259 (34%), Positives = 134/259 (51%), Gaps = 5/259 (1%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           N  DP+  Q +   +E        +DP+ +  + + +  I+H+Y +R+L  +   C V C
Sbjct: 71  NARDPLFLQVMSFADEFLQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNC 130

Query: 110 RFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           R+CFRR     Q KG   + ++ + AL YI    +I EVI +GGDPL+     +  ++K 
Sbjct: 131 RYCFRRHFPYDQNKG---NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKH 187

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
           L  + H+  LR HSR+P+V PQRI  +    L +      +  H NH  E  E+   A+ 
Sbjct: 188 LENLPHLTRLRIHSRLPVVIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMD 247

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
           +L N G++LL+QSVLLK +NDD  IL  L      + I PYYLH  D   G +HF L   
Sbjct: 248 KLKNCGVVLLNQSVLLKNVNDDAHILKVLSDRLFSVGILPYYLHLLDKVEGAAHFYLDDA 307

Query: 289 EGQKIVASLKEKISGLCQP 307
           +  +I   L+   SG   P
Sbjct: 308 QALRIYKQLQRITSGYLVP 326


>gi|158335745|ref|YP_001516917.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina
           MBIC11017]
 gi|158305986|gb|ABW27603.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina
           MBIC11017]
          Length = 379

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 153/297 (51%), Gaps = 7/297 (2%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           + +E  D I     H+   +    A LI+  +P DP+ +  +P   E +       D  G
Sbjct: 31  LGEEDCDRITAAQTHFPFMVPEGYAQLIDWQDPTDPLRQLLLPSVYEQD--DHGSLDTSG 88

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +   + + G+ H+Y    +L +   C  +CR+CFRR ++     T  + +D + A+AYIQ
Sbjct: 89  ETLSTVVPGLQHKYEQTAVLIVTQACAGHCRYCFRRRLMSKDVMTKETIEDLQGAIAYIQ 148

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197
              +I  V+ +GGDP++ S +RL  +L  L  I H+  +R  +++P   P R   +PEL+
Sbjct: 149 THPEIDNVLMSGGDPMVSSTRRLANLLAALAEIPHLWQIRISTKLPAFLPSRFTSDPELL 208

Query: 198 QCLKEAGKPVYIAI--HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
           Q L +  +   I    H +HP E +  A  A++ L NAG +L +Q  L++G+N   +++ 
Sbjct: 209 QVLAQYQERFQIVFQCHFDHPREITPAAEQALAVLRNAGCLLTAQIPLMQGVNSSVDVME 268

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YIL 311
            L +    L + P YL HP       HF+L I EG K+V  L+++ +G  + F YIL
Sbjct: 269 TLFKRLHRLSVLPQYLFHPRPVKHALHFQLPILEGLKLVEGLRQRCNGSVKRFRYIL 325


>gi|307353177|ref|YP_003894228.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
           petrolearius DSM 11571]
 gi|307156410|gb|ADN35790.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
           petrolearius DSM 11571]
          Length = 358

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 9/284 (3%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           ++ + N++         +LIN  +P DPI +  IP   E+  +     DP  +  ++   
Sbjct: 24  LEAVENNFPFLANQYYLSLINWDDPEDPIKKIIIPNSAEM--VKWGSLDPSMEARNTKSP 81

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           G+ H+Y    L+ +   C  +CRFCFR+ +    +   +  +D    + YI+   +I  V
Sbjct: 82  GLQHKYQATALMLISDNCGGFCRFCFRKRLFIKPEDEKI--RDLSTDIDYIRSHPEISNV 139

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-----LIQCLKE 202
           + +GGD L++   RL K++  L  IKHV+ +R  +++P  +P RI  +     +IQ    
Sbjct: 140 LLSGGDALMIPTSRLSKIVSALFSIKHVKSVRIGTKMPAYNPFRITGDESLQAMIQENSR 199

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           +GK +Y     NHP E ++EA  A+  L  +G  L +Q+ +L G+N+DPE L+ L     
Sbjct: 200 SGKMLYFMTQFNHPRELTKEAKEAMDLLRLSGASLANQTPILNGVNNDPETLSGLCSNLA 259

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           E    PYYL     AAG  HF + +E   +I    K  +SGL +
Sbjct: 260 EAGNVPYYLFQCRPAAGNRHFTVPVENTYEIYEKAKRSLSGLAK 303


>gi|332975312|gb|EGK12210.1| hypothetical protein HMPREF9374_1621 [Desmospora sp. 8437]
          Length = 377

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 151/307 (49%), Gaps = 16/307 (5%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           + + + + + ++   +   ++P ++ L      +DP+A+QFIP   E      E+    G
Sbjct: 9   VHRTEREMVLDVIGKFRTKMSPALSRLAKQ---SDPVAKQFIPSPYEALDFGTEKPFEEG 65

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
            NNH  + G+   Y DR +L     C  YCR+CF++    +     +S +D + A+ +I+
Sbjct: 66  KNNHG-IYGLERVYEDRAVLTPYFECSAYCRYCFKKSRTLAGSAKRMSDEDIDKAIRFIE 124

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
             S+I  V+ TGGDPL+   + L+KVL  +  I H++ +R  +R  +  P+++ P+L + 
Sbjct: 125 SDSRIRTVLITGGDPLV-DPRLLEKVLDKVFPIPHIRNIRIGTRNILFSPEKVTPDLAKM 183

Query: 200 LKE----------AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
           +              K + I +  NH  E + E + A  RL   GI +  Q VLLKGIND
Sbjct: 184 IARYQQIDYDEPRKSKNISIGLSLNHVDELTPEVVRAYQRLIREGITVRGQVVLLKGIND 243

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
               +  L+ TF+   I PYYL H     G  HFR ++++G  ++  L    SG     Y
Sbjct: 244 SVSAMRELLETFLCTGIVPYYLFHCMPVVGAKHFRTSVQKGLDLLQELS-PYSGTTTFQY 302

Query: 310 ILDLPGG 316
           +   P G
Sbjct: 303 VYVTPIG 309


>gi|33152475|ref|NP_873828.1| hypothetical protein HD1410 [Haemophilus ducreyi 35000HP]
 gi|33148698|gb|AAP96217.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 330

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 136/255 (53%), Gaps = 5/255 (1%)

Query: 54  DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
           DP+  Q +  ++E        +DP+ +  +SP   I+H+Y +R+L  + + C + CR+CF
Sbjct: 64  DPLFLQAMSLQDEFVQARGFSKDPLKEQ-YSPAPNILHKYQNRLLFMIKNSCAINCRYCF 122

Query: 114 RREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           RR    ++ K   L+    +  LAYI +  ++ EVIF+GGDP++     L  +L  +  I
Sbjct: 123 RRHFPYAEVKSGPLA---WQQGLAYIADYKELEEVIFSGGDPMMAKDNELAWLLTQIEQI 179

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H++ LR H+R+P+V P RIN +L   L ++   + +  H NH  E  +   + IS L  
Sbjct: 180 PHIKTLRIHTRLPVVIPNRINRQLCDRLSKSPLNIVVVTHINHANELDDILASKISLLKQ 239

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           A + +L+Q+VLLKGIND+ + L  L        I PYYLH  D   G SHF +  ++   
Sbjct: 240 ANVTVLNQAVLLKGINDNAKTLKALNDKLFAAGILPYYLHLLDKVEGASHFFIDDQQALV 299

Query: 293 IVASLKEKISGLCQP 307
           I   L+   SG   P
Sbjct: 300 IYKELQRISSGYLVP 314


>gi|196234182|ref|ZP_03133014.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus
           Ellin428]
 gi|196221741|gb|EDY16279.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus
           Ellin428]
          Length = 456

 Score =  145 bits (366), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/316 (29%), Positives = 158/316 (50%), Gaps = 19/316 (6%)

Query: 26  DEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIP-QKEELNILPEEREDPIGDN 81
           ++++   +H  +AL  +P +  LI+  +P +DPI  QF+P + ++    P  + D + + 
Sbjct: 81  EDLQAALDHAPMALRISPYLLGLIDWRDPLHDPIRTQFLPLRSQQQPDHPLLQLDSLHEQ 140

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAAL 135
             SP+ G+ HRYPD+ L      CPVYCRFC R   VG+    V       S    E A 
Sbjct: 141 EDSPVPGLTHRYPDKALFLPQLSCPVYCRFCTRSYAVGNDTPEVEKLALTTSLARWEQAF 200

Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--- 192
           AYI  +  + +++ +GGD   L    LQ + + L  + +++ +R+ ++   V PQ+I   
Sbjct: 201 AYIASQPDLEDIVISGGDSYNLKADHLQLIGERLLKMPNIRRIRYATKGLCVMPQKILSD 260

Query: 193 --NPELIQCLKEAG----KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
               + +  + E G    K V +  H NHP E +     A++ L   GI +  Q+VL + 
Sbjct: 261 HAWTDALTRVAELGRSLHKDVVVHTHFNHPAEITSITQDAMNVLVERGIHVRCQTVLQRT 320

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDDP  +  L+R    + + PYY++  D+  G    R  +   QK+   ++   +G   
Sbjct: 321 VNDDPATMTQLVRRLSYVNVHPYYVYMHDMVPGVEDLRTPLATAQKLEKYVRGATAGFNT 380

Query: 307 PFYILDLPGGYGKVKI 322
           P ++LD PGG GK  +
Sbjct: 381 PAFVLDAPGGGGKRDV 396


>gi|27383343|ref|NP_774872.1| hypothetical protein bll8232 [Bradyrhizobium japonicum USDA 110]
 gi|27356518|dbj|BAC53497.1| bll8232 [Bradyrhizobium japonicum USDA 110]
          Length = 499

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 138/268 (51%), Gaps = 18/268 (6%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           D  G+++++ + G+ H+Y    LL +   C  YCR+CFR+ +VG     +  + D     
Sbjct: 209 DTSGEHDNTVVPGLQHKYAQTGLLLVTDRCASYCRYCFRKRIVGKDSDEI--APDFARVA 266

Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-- 193
            YI    ++  V+ +GGDP +LS  +L K+L  L  I H++ +RF +++    P+R    
Sbjct: 267 QYIAGHPEMTNVLLSGGDPFVLSTAKLGKILDHLLPIPHLESIRFGTKIVAFAPRRFEDP 326

Query: 194 --PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
             P L + + EAGK   I  H +H  E S +A   I  L   G+  L+QSVLL  +NDDP
Sbjct: 327 ALPALFRRISEAGKTAVIVAHFDHIGEISVDAERNIRALRAQGVQFLNQSVLLAKVNDDP 386

Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY-- 309
           EILA       ++ ++PYYL       G SHF++++  G +I   +  ++SG+ + F   
Sbjct: 387 EILAATFAKCHQMGVRPYYLFQGRPVKGASHFQVSLRRGIEIARGINRRLSGIQKTFKYI 446

Query: 310 ---------ILDLPGGYGKVKIDTHNIK 328
                    +LDL G  G+V +  H  K
Sbjct: 447 MSHYTGKIEVLDL-GADGRVYMRYHQNK 473


>gi|325916984|ref|ZP_08179226.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536835|gb|EGD08589.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937]
          Length = 216

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 77/215 (35%), Positives = 119/215 (55%), Gaps = 2/215 (0%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C V+CR+CFRR    +++    + +    A+  I   + I EV+ +GGDPL L+  +L +
Sbjct: 1   CAVHCRYCFRRHFPYAEETA--AREGWREAVDAIAADADIDEVLLSGGDPLSLASPKLAE 58

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
           +   L  I H++ LR HSR+P+V P R++  L+  L+    PV   IHANH  EF  +  
Sbjct: 59  LTDALAAIPHLKRLRIHSRLPVVLPARVDAPLLAWLRSLPWPVAFVIHANHANEFDADVD 118

Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
            A+  L + G+ LL+Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF 
Sbjct: 119 TAMRALRDVGVQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFE 178

Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
           +     + + A L  ++SG   P  + ++PG  GK
Sbjct: 179 VDDARARALHAELATRLSGYLVPRLVREIPGDTGK 213


>gi|307133226|ref|YP_003885242.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937]
 gi|306530755|gb|ADN00686.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937]
          Length = 386

 Score =  142 bits (357), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 13/295 (4%)

Query: 37  IALTPVIANLINPHNPND----PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV-H 91
           + +TP  ANLI      D    P+ RQ +P   +  +   + E    + +H     I  H
Sbjct: 60  MQITPYYANLIRQAAYTDIVDNPLWRQVVPFWHDDGVTGYDGESENWELSHEMKTPICQH 119

Query: 92  RYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +Y +R++L++++ C  YC+FCF   R   V S+K      K  + +L YI++  ++ EVI
Sbjct: 120 KYDNRVILRMVNTCNSYCQFCFEALRTLKVDSEKENA-GRKAFQDSLDYIRQTPEVEEVI 178

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            +GGDP++L+  +L + L  +R I+   ++R HSR    +P RI   L+  L+      +
Sbjct: 179 LSGGDPMMLTDAKLDECLGAIRNIRDSLLIRIHSRSLTFNPYRITDTLLDILQRHRVNAF 238

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
             +H  HP E S+    A+ R+     I+ S   LL+G+ND+ E L +L      + +KP
Sbjct: 239 -GVHVCHPLELSDAFRDAVKRIQQVVPIVFSNMPLLRGVNDNEETLKSLFIELYRMGVKP 297

Query: 269 YYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           YYL+H    + G S ++ +I +   I+  LK ++S +  P Y+  LP   GK  +
Sbjct: 298 YYLYHFMPFSPGASEYKASIRDAIAIMNRLKRRVSNIALPEYV--LPHAKGKFTV 350


>gi|325122955|gb|ADY82478.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus PHEA-2]
          Length = 226

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 118/216 (54%), Gaps = 2/216 (0%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C V+CR+CFRR      +  +  ++D      YI+    I E+I +GGDPL LS+++L  
Sbjct: 5   CAVHCRYCFRRHF--PYQENLPKNEDWLNIKNYIEANPNINEIILSGGDPLTLSNRKLAL 62

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
            L+ L  +K +QILR HSRVPIV P RI+ +LI  LK +   + + +H+NH  E  +   
Sbjct: 63  WLERLSSLKQIQILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLVVHSNHASELDDFTC 122

Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
           + + +L++  I +L+Q+VLLKG+ND  + L +L     E R+ PYYLH  D   G  HF 
Sbjct: 123 SKLLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYLHVLDKVKGAQHFD 182

Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           L   +   I   +   + G   P  + ++ G   K 
Sbjct: 183 LESSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKT 218


>gi|300722010|ref|YP_003711290.1| hypothetical protein XNC1_1003 [Xenorhabdus nematophila ATCC 19061]
 gi|297628507|emb|CBJ89074.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
          Length = 389

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 149/276 (53%), Gaps = 13/276 (4%)

Query: 54  DPIARQFIP--QKEELNILPEERED-PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +P+ RQ +P   +E+LN    E E+  + +   +P+    H+Y +R++L++++ C  YC+
Sbjct: 84  NPLWRQVVPFWNEEKLNGYDGESENWELKEEMKTPI--CQHKYDNRVILRMVNACNSYCQ 141

Query: 111 FCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
           FCF   R   V S K         + +L YI+    + EVI +GGDPL+L+  +L + L 
Sbjct: 142 FCFEALRTLKVNSDKSNA-GRTSFQQSLEYIKNTPSVEEVILSGGDPLMLTDSKLDESLA 200

Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227
            +R I+   ++R HSR    +P RI   L++ LK+  +     +H  HP+E SEE   A+
Sbjct: 201 AIREIREDLLIRVHSRALTFNPYRITDALLEILKKH-RVNSFGVHICHPHELSEEFQHAV 259

Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLT 286
             + +   I+ S    L+GIND+ EIL  L  +   + +KPYYL+H    + G+S ++ +
Sbjct: 260 RCIQSVVPIVFSNMPFLRGINDNEEILHKLFISLYRIGVKPYYLYHFMPFSPGSSEYKAS 319

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           I +   I+  LK ++S +  P Y+  LP   GK  +
Sbjct: 320 INDAIAIMGKLKRRVSNIALPEYV--LPHMKGKFTV 353


>gi|218661195|ref|ZP_03517125.1| hypothetical protein RetlI_17423 [Rhizobium etli IE4771]
          Length = 320

 Score =  140 bits (353), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 7/242 (2%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           D  G++ ++ + G  H+Y    LL     C  YCR+CFR+ +VG +   +  + +    +
Sbjct: 51  DTSGEHENTVVPGFQHKYEQTGLLLATDRCASYCRYCFRKRIVGQESSEI--ANEFAQIV 108

Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NP 194
            YI    ++  V+ +GGDP +L   +L  +L  L    H++ +RF +++    P+R  +P
Sbjct: 109 EYIGSHLEMTNVLISGGDPFVLRTGKLHGILDYLLPFTHLKSIRFGTKMLAYAPKRFEDP 168

Query: 195 EL---IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
           EL    Q + EAGK   I  H +H  E S +A  +I  L + G+  L+QSVLL  +NDDP
Sbjct: 169 ELGALFQRIHEAGKTAVIVTHFDHIGEISLDAERSIQSLRSHGVQFLNQSVLLAKVNDDP 228

Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YI 310
           EILA+   T  ++ I PYYL       G SHF++ ++ G +I   + +++SG+ + F YI
Sbjct: 229 EILASTFATCHQMGIHPYYLFQSRPVKGASHFQVPLDRGLEIAHGVSQRLSGVQKTFKYI 288

Query: 311 LD 312
           + 
Sbjct: 289 MS 290


>gi|119946889|ref|YP_944569.1| lysine 2,3-aminomutase YodO family protein [Psychromonas ingrahamii
           37]
 gi|119865493|gb|ABM04970.1| L-lysine 2,3-aminomutase [Psychromonas ingrahamii 37]
          Length = 337

 Score =  139 bits (349), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 142/272 (52%), Gaps = 3/272 (1%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           NDP+ +Q +P ++E  +      DP+ ++N S L G++H+Y  R+LL L   C + CR+C
Sbjct: 69  NDPLLQQVLPIEDEELVSEGYSTDPLEEHN-SALPGLLHKYQSRVLLILKSGCAINCRYC 127

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR      +   ++ K  +  + YI+   ++ EVI +GGDPL+     LQ V+  L  +
Sbjct: 128 FRRHF--PYQDNNINKKQLQEIITYIKSHPEVNEVILSGGDPLMSKDDFLQHVINELELL 185

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
             ++ LR HSR+P+V P RI  +L     ++   V   +H NH  E  +    A+++L  
Sbjct: 186 PQLRRLRLHSRLPVVIPSRITDQLCHMFNKSRLNVVFVLHINHANEIDQIFKDAMNKLHQ 245

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           AG+ LL+QSVLLKGIND+ + L +L     E  I PYYL   D   G  HF L  +   +
Sbjct: 246 AGVQLLNQSVLLKGINDNSQALVDLSEALFEAHILPYYLFLLDKVQGAQHFDLPEQRAIQ 305

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
           +   +   + G   P    ++ G   K  I T
Sbjct: 306 LTQEMSAALPGYLVPRLSREIAGEKNKTLIAT 337


>gi|289524601|ref|ZP_06441455.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502159|gb|EFD23323.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 169

 Score =  136 bits (342), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 106/169 (62%), Gaps = 2/169 (1%)

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E N   E+  DP+ ++ ++P+ G VHRYPDR +L +   C +YCRFC RR   G +    
Sbjct: 3   ERNTAVEDFHDPLAEDRYAPVPGFVHRYPDRGILLVTDQCSMYCRFCTRRRFAG-EIDRP 61

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            S ++ +AA+ YI++   + +++ TGGDPL +    L+ +L++LR I HV+I+R  +RVP
Sbjct: 62  KSREEMQAAIDYIEKTEALRDILITGGDPLTMEDDNLEWLLRSLRRIPHVEIIRIGTRVP 121

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
            V PQRI   L+  LK+   P++I +H NHP E +  +  A++ LANAG
Sbjct: 122 AVMPQRITNSLVTMLKKF-HPLWINVHFNHPKEITPHSARALNILANAG 169


>gi|107027427|ref|YP_624938.1| hypothetical protein Bcen_5091 [Burkholderia cenocepacia AU 1054]
 gi|116693862|ref|YP_839395.1| lysine 2,3-aminomutase YodO family protein [Burkholderia
           cenocepacia HI2424]
 gi|105896801|gb|ABF79965.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia AU 1054]
 gi|116651862|gb|ABK12502.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia HI2424]
          Length = 396

 Score =  135 bits (341), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 82/237 (34%), Positives = 130/237 (54%), Gaps = 10/237 (4%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWE 146
           H+Y +R++L++++ C  YC+FCF   R   V S+K    +S+DT   ++AYI++   I E
Sbjct: 129 HKYDNRVILRMVNTCNSYCQFCFEALRTLEVNSEKTN--ASRDTFGESVAYIKQNPAIEE 186

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           VI +GGDPL+LS  +L + L  LR +    ++R HSR    +P R+  +L+  L E  + 
Sbjct: 187 VILSGGDPLMLSDAKLDEHLSALRDVGRDLLIRIHSRSLTFNPYRVTDQLVAML-ERHRV 245

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
               +H  HP E S     A+ R+ +A  I+ S    L+GINDD E L  L        +
Sbjct: 246 NAFGVHVCHPDELSPAFTDAVKRIRSAVPIVFSNMPFLRGINDDEETLHRLFIELYRRGV 305

Query: 267 KPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           KPYYL+H    + G S ++ +I +  +I+  LK ++S +  P Y+  LP   GK  +
Sbjct: 306 KPYYLYHFMPFSPGASVYKASIRDAIRIMNRLKRRVSNVAMPEYV--LPHAKGKFTV 360


>gi|71735715|ref|YP_276669.1| arginine aminomutase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71556268|gb|AAZ35479.1| arginine aminomutase, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 385

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 145/276 (52%), Gaps = 15/276 (5%)

Query: 55  PIARQFIPQKEELNILPEEREDPIGDN---NHSPLKGIV-HRYPDRILLKLLHVCPVYCR 110
           P+ RQ +P   E N++ +   D   +N   NH     I  H+Y +R++L++ + C  YC+
Sbjct: 79  PLWRQVVPYWNE-NVMGDY--DGASENWELNHEMKTPICQHKYDNRVILRMTNTCNAYCQ 135

Query: 111 FCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
           FCF   +   Q GT   + +T+  L    YI+    I EVI +GGDPL+LS ++L++ L 
Sbjct: 136 FCFE-ALRTLQVGTDKKNANTDLFLDSVEYIRNNPAIEEVILSGGDPLMLSDRKLEENLA 194

Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227
            LR I+   ++R HSR    +P R+  E +  L +  K     +H  HP E S +   AI
Sbjct: 195 ALRSIREDLLIRIHSRALSFNPFRVTDEFVAILAKY-KVNAFGVHVCHPLELSVDFERAI 253

Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLT 286
           S++  A  I+ S   LL+G+ND+ + L  L      + +KPYYL+H    + G S ++ +
Sbjct: 254 SKIRIAVPIIFSNMPLLRGVNDNEKTLHRLFIDLYRMGVKPYYLYHFMPFSPGASEYKAS 313

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           I +   I+  LK ++S +  P Y+  LP   GK  +
Sbjct: 314 ISQAIAIMNRLKRRVSNIALPEYV--LPHAQGKFTV 347


>gi|271498600|ref|YP_003331625.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
           Ech586]
 gi|270342155|gb|ACZ74920.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
           Ech586]
          Length = 386

 Score =  135 bits (339), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 91/310 (29%), Positives = 153/310 (49%), Gaps = 17/310 (5%)

Query: 26  DEIKEISNH----YSIALTPVIANLINPHN----PNDPIARQFIPQKEELNILPEEREDP 77
           DEI +   H      + +TP  ANLI         ++P+ RQ +P   +      + E  
Sbjct: 45  DEIAQRITHNLASRKMQITPYYANLIKDAGYKNIVDNPLWRQVVPFWLDDGATGYDGESE 104

Query: 78  IGDNNHSPLKGIV-HRYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEA 133
             + +H     I  H+Y +R++L++++ C  YC+FCF   R   V S+K      K  + 
Sbjct: 105 NWELSHEMKTPICQHKYDNRVILRMVNTCNSYCQFCFEALRTLKVDSEKENA-GRKAFQD 163

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
           +L YI+    + EVI +GGDP++L+  +L + L  +R I+   ++R HSR    +P RI 
Sbjct: 164 SLNYIRNTPGVEEVILSGGDPMMLTDVKLDECLGAIRNIRDSLLIRIHSRSLTFNPYRIT 223

Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
             L+  L+      +  +H  HP E S+    A+ R+     I+ S   LL+G+ND+ + 
Sbjct: 224 DTLLDILRRHRVNAF-GVHVCHPLELSDAFRDAVKRIQQVVPIVFSNMPLLRGVNDNEDT 282

Query: 254 LANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           L  L      + +KPYYL+H    + G S ++ +I +   I+  LK ++S +  P Y+  
Sbjct: 283 LRQLFIELYRMGVKPYYLYHFMPFSPGASEYKASIRDAIAIMNRLKRRVSNIALPEYV-- 340

Query: 313 LPGGYGKVKI 322
           LP   GK  +
Sbjct: 341 LPHAKGKFTV 350


>gi|169608816|ref|XP_001797827.1| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15]
 gi|160701722|gb|EAT84959.2| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15]
          Length = 487

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/316 (29%), Positives = 153/316 (48%), Gaps = 37/316 (11%)

Query: 36  SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
           +I +TP + + I+ +NP +DPI +QFIP    +          I D+ H  L  +     
Sbjct: 85  AIRITPHVLSRIDWNNPLDDPIRKQFIPLASCI----------IPDHEHLKLDSLEEEKD 134

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVL------SSKDTEAALAYIQEKSQIWEVI 148
                       +YCRFC R   VG    TV       S    E    Y++    + +++
Sbjct: 135 S-----------LYCRFCTRSYAVGGGTDTVTKRPQKPSLTRWEKVFEYVENCKDLKDIV 183

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NP------ELIQC 199
            +GGD   L  + L ++ + L ++ +++ +RF S+   V P RI   +P      EL   
Sbjct: 184 VSGGDAYYLQPEDLLRMGRRLLHMDNIERVRFASKGLAVAPGRICEGDPWTEALIELSNL 243

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
            +  GK V +  H NHP E +     A + L   G+I+ +QSVLLKG+N+DP I+++L++
Sbjct: 244 GRSLGKQVCLHTHINHPREITWVTKTAANYLFKHGVIVRNQSVLLKGVNNDPVIMSDLIQ 303

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
               + I+PYY++  D+  G    R  ++E   +   L+  +SG   P +++DLPGG GK
Sbjct: 304 GLSSINIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKQLRGTLSGFMMPAFVIDLPGGGGK 363

Query: 320 VKIDTHNIKKVGNGSY 335
             + T    + G  +Y
Sbjct: 364 RLVSTMESYENGVATY 379


>gi|289671289|ref|ZP_06492364.1| lysine 2,3-aminomutase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 188

 Score =  130 bits (326), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/185 (37%), Positives = 104/185 (56%)

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           +A I     I EV+ +GGDPL L+  +L ++   L  I H++ LR HSR+PIV P+R++ 
Sbjct: 1   MAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDA 60

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
            L+  L++   PV   +HANH  EF     AA+  L +AG  LL+Q+VLL+G+ND  + L
Sbjct: 61  PLLAWLRQLPWPVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDAL 120

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           A L        + PYYLH  D  AG +HF +     + +   L  ++SG   P  + ++P
Sbjct: 121 AALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIP 180

Query: 315 GGYGK 319
           G  GK
Sbjct: 181 GDTGK 185


>gi|330003195|ref|ZP_08304561.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3]
 gi|328537036|gb|EGF63321.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3]
          Length = 195

 Score =  129 bits (323), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 104/189 (55%)

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           + YI    Q+ E+IF+GGDPL+     L  ++  L  I HV+ LR HSR+PIV P RI  
Sbjct: 1   MDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRIHSRLPIVIPARITE 60

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
            L    + +   V +  H NH  E   E  AA++ L  AG+ LL+QSVLL+G+ND+ + L
Sbjct: 61  TLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTL 120

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           A+L     +  + PYYLH  D   G +HF ++ +E ++I+  L   ISG   P    ++ 
Sbjct: 121 ADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTLISGYMVPKLAREIG 180

Query: 315 GGYGKVKID 323
           G   K  +D
Sbjct: 181 GEPSKTPLD 189


>gi|38567180|emb|CAE76473.1| related to L-lysine 2, 3-aminomutase [Neurospora crassa]
          Length = 519

 Score =  126 bits (316), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 48/298 (16%)

Query: 36  SIALTPVIANLINPHNPN-DPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
           +I +TP I + IN  +P  DPIARQF+P K  +  LP+  +   D + +   SP+KG+  
Sbjct: 202 AIRMTPYILSRINWLDPRHDPIARQFLPMKSIM--LPDHPKLTLDSLHETADSPVKGLAS 259

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
             P R                 RR                E A AYI+ + ++ +++ +G
Sbjct: 260 LKPTR-----------------RR---------------WEEAFAYIESRPELQDIVVSG 287

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-------K 201
           GD   L  ++L  + + L  + +++  RF S+   V P RI  E    +  L       K
Sbjct: 288 GDSYYLQPEQLTLIGERLISLPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISNKAK 347

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           +AGK + +  H N P E S  +  A  +L   G+++ +Q+VLL+G+NDD E ++ L+R  
Sbjct: 348 KAGKSMALHTHFNSPNEISWISSDASQKLFENGVMVRNQTVLLRGVNDDYETMSTLIRQL 407

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
            +  I PYY++  DL     H R  ++    + A ++  I+G   P +++DLPGG GK
Sbjct: 408 ADNNITPYYVYQCDLVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGGK 465


>gi|85118412|ref|XP_965436.1| hypothetical protein NCU02663 [Neurospora crassa OR74A]
 gi|28927245|gb|EAA36200.1| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 492

 Score =  125 bits (315), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 48/298 (16%)

Query: 36  SIALTPVIANLINPHNPN-DPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91
           +I +TP I + IN  +P  DPIARQF+P K  +  LP+  +   D + +   SP+KG+  
Sbjct: 175 AIRMTPYILSRINWLDPRHDPIARQFLPMKSIM--LPDHPKLTLDSLHETADSPVKGLAS 232

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
             P R                 RR                E A AYI+ + ++ +++ +G
Sbjct: 233 LKPTR-----------------RR---------------WEEAFAYIESRPELQDIVVSG 260

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-------K 201
           GD   L  ++L  + + L  + +++  RF S+   V P RI  E    +  L       K
Sbjct: 261 GDSYYLQPEQLTLIGERLISLPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISNKAK 320

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           +AGK + +  H N P E S  +  A  +L   G+++ +Q+VLL+G+NDD E ++ L+R  
Sbjct: 321 KAGKSMALHTHFNSPNEISWISSDASQKLFENGVMVRNQTVLLRGVNDDYETMSTLIRQL 380

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
            +  I PYY++  DL     H R  ++    + A ++  I+G   P +++DLPGG GK
Sbjct: 381 ADNNITPYYVYQCDLVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGGK 438


>gi|332827425|gb|EGK00177.1| hypothetical protein HMPREF9455_03509 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 444

 Score =  125 bits (315), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%)

Query: 76  DPIGDNNHSP------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +P G  ++ P      LKGI H+YP+ +L        C  YC FCFR        G   +
Sbjct: 109 NPAGQEHNVPSLGEIKLKGIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFA 168

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVP 185
            K+ +  L Y++   ++ +V+FTGGDP++++   L   +  L      H++ +R  ++  
Sbjct: 169 MKEADLLLKYLRVHKEVTDVLFTGGDPMVMNAAILSSYINPLLTSDFDHIRSIRIGTKSL 228

Query: 186 IVDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIA-AISRLANAGII 236
              P R      + ++I+  +E   +GK + I  H NHP E S EA+  AI R+ + G  
Sbjct: 229 AYWPYRYLTDTDSDDIIRLFEEINKSGKNLSIQAHFNHPRELSTEAVKQAIMRIRSTGAQ 288

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           + +QS LLK IND PEI A + R  V+L   PYY+          +F L +E+   I   
Sbjct: 289 IRTQSPLLKHINDKPEIWAQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNIFRR 348

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
             +++SGLC+      +    GK+++
Sbjct: 349 AYQQVSGLCRTVRGPSMSDHAGKIQV 374


>gi|332829850|gb|EGK02492.1| hypothetical protein HMPREF9455_01449 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 441

 Score =  125 bits (315), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 19/266 (7%)

Query: 76  DPIGDNNHSP------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +P G  ++ P      LKGI H+YP+ +L        C  YC FCFR        G   +
Sbjct: 106 NPAGQEHNVPYLGEIKLKGIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFA 165

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVP 185
            K+ +    Y++   ++ +++FTGGDP+I++   L+  ++ L      H++ +R  ++  
Sbjct: 166 MKEADLLFKYLRLHKEVTDILFTGGDPMIMNASTLEAYIRPLLEPEFDHIRTIRIGTKSL 225

Query: 186 IVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGII 236
              P R   +        L + +  +GK + +  H NHP E S EA+  AI+R+ + G  
Sbjct: 226 AYWPYRYLTDKDSDDIIRLFELVNRSGKSLSLQAHFNHPRELSTEAVKQAIARIRSTGSQ 285

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           + +QS LL+ IND PE+ A + R  V+L   PYY+          +F L +E+  +I   
Sbjct: 286 IRTQSPLLRNINDKPELWARMWRKQVDLGCIPYYMFIARDTGSKHYFELPLEKCWQIFRR 345

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
              ++SGLC+      +    GK+++
Sbjct: 346 AYRQVSGLCRTVRGPSMSDHAGKIQV 371


>gi|332885734|gb|EGK05980.1| hypothetical protein HMPREF9456_02244 [Dysgonomonas mossii DSM
           22836]
          Length = 444

 Score =  124 bits (312), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 13/269 (4%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGT 124
           LN  P  +E  +       LKGI H+YP+ +L        C  YC FCFR          
Sbjct: 106 LNPNPAGQEHNVPSLGEVKLKGIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSEL 165

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHS 182
             + K+ +  L Y++   ++ +V+FTGGDP++++   L   +K L      H++ +R  +
Sbjct: 166 KFAMKEVDLLLKYLRVHKEVTDVLFTGGDPMVMNAAILSSYIKPLLTSDFDHIRSIRIGT 225

Query: 183 RVPIVDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIA-AISRLANA 233
           +     P R      + ++I+  +E   +GK + I  H NHP E S +A+  AI R+ N 
Sbjct: 226 KSLAYWPYRYLTDSDSDDIIRLFEEINKSGKNLSIQAHFNHPRELSTDAVKQAILRIKNT 285

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           G  + +QS LLK IND PEI A + R  V+L   PYY+          +F L +E+   I
Sbjct: 286 GAQIRTQSPLLKHINDKPEIWAQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNI 345

Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKI 322
                +++SGLC+      +    GK+++
Sbjct: 346 FRRAYQQVSGLCRTVRGPSMSDHAGKIQV 374


>gi|163756014|ref|ZP_02163131.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1]
 gi|161324185|gb|EDP95517.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1]
          Length = 418

 Score =  124 bits (311), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 166/383 (43%), Gaps = 54/383 (14%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHN-PNDPIARQ 59
           + +  TL   + +   + + +EQ++EIK +S+ Y       V+ NLI+ +N PNDPI R 
Sbjct: 3   KFKSYTLNKLEKIPQLSGLSEEQMEEIKIVSSIYPFKTNNYVLENLIDWNNIPNDPIFRL 62

Query: 60  FIPQKEELNILPEERED---------------------------PIGDNN-------HSP 85
             P KE L  +PE  E                            P G             
Sbjct: 63  NFPHKEML--IPEHFEQLKRVRATGTKEELKEVIYNIRMKLNPHPAGQKELNGAFLEEKK 120

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L+GI H+Y D +L        C  YC FCFR     +     + SK+ +  L Y+ E  Q
Sbjct: 121 LEGIQHKYKDILLFFPSQSQTCHAYCTFCFRWPQFINDLDFKIQSKEIDPLLKYLSENPQ 180

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-------- 195
           I EV+FTGGDP+I++ + L   ++ L  +  ++ +R  ++     P +   +        
Sbjct: 181 ITEVLFTGGDPMIMNSRVLDSYIEPLLKVDSIKTIRIGTKALSYWPYKFTTDEDAEGMLN 240

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEIL 254
           +++ + +AGK +    H NHP E     +  AI +L + G ++ +QS LL+ IN+D +  
Sbjct: 241 VLRKITKAGKHLGFMAHFNHPKELEPPVVKEAIDKLRSIGAVIRTQSPLLRFINNDAKTW 300

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
             +    V+L   PYY+  P       +F  T+E   K+        SGL        + 
Sbjct: 301 TTMWEKQVQLGCIPYYMFLPRDTGAQHYFAETLENAHKLYTEAIRNCSGLASTAKGPVMS 360

Query: 315 GGYGKVKIDTHNIKKVGNGSYCI 337
             +GKV+     I  V N SY +
Sbjct: 361 MTHGKVE-----ILGVKNNSYTL 378


>gi|56477547|ref|YP_159136.1| hypothetical protein ebA3745 [Aromatoleum aromaticum EbN1]
 gi|56313590|emb|CAI08235.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 462

 Score =  122 bits (306), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 13/256 (5%)

Query: 80  DNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
           D + + L+GI H+Y + +L        C  YC FCFR       K   ++S + E   AY
Sbjct: 137 DEHGNRLEGIQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKELRIASSEAETLHAY 196

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI--- 192
           ++   ++ +++FTGGDP+++  + L+  L+ L      H+Q +R  ++     P R    
Sbjct: 197 LRHHCEVTDLLFTGGDPMVMKTRHLRDYLEPLLKPEFDHIQTIRIGTKALTFWPHRFLGA 256

Query: 193 --NPELIQCLK---EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKG 246
               ELI  L+   EAGK V +  H NH  E   EA  AA+ RL  AG+++  Q  L+  
Sbjct: 257 DDADELIALLERLTEAGKHVALMTHFNHWKELDTEATQAAVRRLRKAGVVIRGQGPLIAH 316

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDDP++ A + +T V L I PYY+         ++F + +    +I     +++SGL +
Sbjct: 317 LNDDPDVWARMWKTQVRLGILPYYMFVERDTGARNYFEVPLVRAWEIYRDAMQQVSGLGR 376

Query: 307 PFYILDLPGGYGKVKI 322
                 +    GKV+I
Sbjct: 377 TARGPSMSASPGKVEI 392


>gi|58426924|gb|AAW75961.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 202

 Score =  122 bits (305), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 95/174 (54%)

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           EV+ +GGDPL L+  +L ++   L  I H++ LR HSR+PIV P+R++  L+  L+    
Sbjct: 26  EVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPW 85

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           P    +HANH  EF      A+  L + G  LL+Q+VLL G+ND  + LA L        
Sbjct: 86  PAAFVLHANHANEFDSAVDMAMHALRDTGAQLLNQAVLLGGVNDSVDALAALSERSFAAG 145

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
           + PYYLH  D  AG +HF +     + +   L  ++SG   P  + ++PG  GK
Sbjct: 146 VLPYYLHQLDRVAGVAHFEVDDARARALHTELATRLSGYLVPRLVREIPGDTGK 199


>gi|189500343|ref|YP_001959813.1| radical SAM domain-containing protein [Chlorobium phaeobacteroides
           BS1]
 gi|189495784|gb|ACE04332.1| radical SAM domain protein [Chlorobium phaeobacteroides BS1]
          Length = 434

 Score =  120 bits (302), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 162/352 (46%), Gaps = 50/352 (14%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHN-PNDPIAR 58
           ++ R  T  +   L     I +EQI  +K ++  Y   +   V  NLI+  N P DPI R
Sbjct: 2   LKYRSYTADNLHTLPQYGEIPEEQIHIVKTVATVYPFRVNSYVTENLIDWSNIPEDPIFR 61

Query: 59  QFIPQKEELNILPEE---------------------RE-------DPIGDN-------NH 83
              PQ+E LN  PE+                     RE       +P G         ++
Sbjct: 62  LSFPQEEMLN--PEDFQRMSGLVSTDAPQDIIRQAAREIQLLQNPNPAGQMELNTPLLDN 119

Query: 84  SPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
             L GI H+Y + +L       VC  YC +CFR       +    ++ D    L Y++E 
Sbjct: 120 EVLHGIQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLESLKFANNDITLLLDYLKEH 179

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE------ 195
            ++ ++IFTGGDP+++S   ++K ++ L  I  V+ +R  ++     P R   E      
Sbjct: 180 PEVKDIIFTGGDPMVMSTALIKKYIQPLLDIPTVKTIRIGTKALSWWPYRFTAEHDSDEI 239

Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
               + +  +GK + I  H +HP E  + +A+ AI+R+ + G ++ SQS +++ +NDD +
Sbjct: 240 LSFFEQIVSSGKHLAIMAHISHPREIETSQAVDAINRIRSTGAVIRSQSPIVRHVNDDAD 299

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           I   + +  ++L I PYY+          +F + + E  +I  +  +++SGL
Sbjct: 300 IWEAMWQKQLQLGIIPYYMFLERDTGPKQYFEIPLSEAVEIFNTAYQRMSGL 351


>gi|193214957|ref|YP_001996156.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium
           ATCC 35110]
 gi|193088434|gb|ACF13709.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium
           ATCC 35110]
          Length = 465

 Score =  120 bits (300), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 14/295 (4%)

Query: 42  VIANLINPHNPNDPIARQFIPQKEELNILPE-EREDPIGDNNHSPLKGIVHRYPDRILL- 99
           ++  L+  + P   +A+     +EELN  P  + E  +   N   + G+ H+Y +  L  
Sbjct: 97  IVQALLAENAPKSKLAKAINQIREELNPHPAGQLEFNVPKLNGQKIDGLQHKYNETALFF 156

Query: 100 -KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                 C  YC +CFR    G      +++   E  +AY++  ++I +V+ TGGDPL +S
Sbjct: 157 PSEGQSCHAYCTYCFRWPQFGENDDLKIATNQIENVIAYLKHHTEISDVLITGGDPLTMS 216

Query: 159 HKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EAGKPVY 208
            K L K +  L    + H++ +R  ++     P R      + +L+   +    +GK + 
Sbjct: 217 AKSLSKYVLALLSEDLPHIRTIRIGTKTLTYWPYRFLTEKDSEQLLDAFRMIVRSGKHLA 276

Query: 209 IAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           +  H NHP E     +A AI R+   G ++ +QS +++GINDD +I + L +  V L + 
Sbjct: 277 LMTHFNHPVELETPEVAEAIQRIRETGAVIRTQSPIIRGINDDAKIWSALWKRQVSLGLV 336

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           PYY+  P        FR+++    +I     + +SG+C+      +    GKV++
Sbjct: 337 PYYMFIPRDTGAQHFFRISLVRAWEIFKEAYQHVSGICRTVRGPSMSTNPGKVQV 391


>gi|323456908|gb|EGB12774.1| hypothetical protein AURANDRAFT_70598 [Aureococcus anophagefferens]
          Length = 1879

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 17/259 (6%)

Query: 64   KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQ 121
            +E LN  P  ++  +     + L G+ H+Y + +L        C  YC +CFR       
Sbjct: 871  RESLNPHPAGQK-ALNAPKKAELTGVQHKYAETVLFFAAAAQTCHAYCTYCFRWAQFIGD 929

Query: 122  KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR---YIKHVQIL 178
                 + KD ++   Y++E  ++ +++FTGGDP+I+  + L++ L+  +   ++ H++ L
Sbjct: 930  PDLRFAQKDADSLFDYLEEHPEVSDILFTGGDPMIMQTRMLKQYLEPFKDPTHLPHIKNL 989

Query: 179  RFHSRVPIVDPQRINP-----ELIQCLKE----AGKPVYIAIHANHPYEFSEEAIA-AIS 228
            R  +R     PQR        EL+  L+E     G+ + I  H  H  E S + +  AI 
Sbjct: 990  RIGTRALTFWPQRFTTDADADELMTLLREVKEIGGRHMAIMAHLGHVRELSTDKVKHAIH 1049

Query: 229  RLAN-AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
            RL    G+I+ SQS +++GINDD ++ A   R  V L + PYY+         S+F + +
Sbjct: 1050 RLKQEGGVIIRSQSPVMRGINDDADVWAAKWREEVRLGVIPYYMFIARDTGAQSYFDVPL 1109

Query: 288  EEGQKIVASLKEKISGLCQ 306
               Q++ A      SGLC+
Sbjct: 1110 VRAQRLYADAIRATSGLCR 1128


>gi|325279772|ref|YP_004252314.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
 gi|324311581|gb|ADY32134.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
          Length = 442

 Score =  117 bits (294), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 19/250 (7%)

Query: 76  DPIGDNNHSP------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +P G +++ P      LKGI H+Y + +L        C  YC FCFR            +
Sbjct: 106 NPAGQDHNVPMLGDIRLKGIQHKYRETVLFFPAQGQTCHAYCSFCFRWPQFSGMNELKFA 165

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVP 185
            K+T+  L Y++   Q+ +V+FTGGDP+ +S   L   ++ L    ++H++ +R  S+  
Sbjct: 166 MKETDLLLKYLRLHPQVTDVLFTGGDPMTMSASLLSAYIEPLLQPGLEHIRTIRIGSKAL 225

Query: 186 IVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGII 236
              P R   +        L + +   GK +    H NHP E S  A+  AI R+ N G  
Sbjct: 226 AYWPYRFISDVDAAEVLRLFEKVTATGKNLSFQAHFNHPVELSTAAVCEAIRRIRNTGAQ 285

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           + +QS LL+ IND PEI   + R  V+L   PYY+          +F + +E+   I   
Sbjct: 286 IRTQSPLLRHINDSPEIWREMWRKQVDLSCIPYYMFVARDTGAKHYFEIPLEKCWDIFRK 345

Query: 297 LKEKISGLCQ 306
              ++SG+C+
Sbjct: 346 AYSQVSGICR 355


>gi|290474686|ref|YP_003467566.1| Arginine aminomutase (fragment) [Xenorhabdus bovienii SS-2004]
 gi|289173999|emb|CBJ80786.1| Arginine aminomutase, putative (fragment) [Xenorhabdus bovienii
           SS-2004]
          Length = 244

 Score =  115 bits (288), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 105/186 (56%), Gaps = 2/186 (1%)

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           +S + EVI +GGDPL+L+  +L + L ++R I+   ++R HSR    +P RI   LI+ L
Sbjct: 29  QSSVEEVILSGGDPLMLTDNKLNESLASIREIRDDLLIRIHSRALTFNPYRITDALIETL 88

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
           K+     +  +H  HP+E SEE   A+ R+ +A  I+ S    L+GIND+ + L  L   
Sbjct: 89  KKYRINAF-GVHVCHPFELSEEFQTAVRRIQSAVPIVFSNMPFLRGINDNEKTLHKLFID 147

Query: 261 FVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
              + +KPYYL+H    + G+S ++ +I +   I++ LK +IS +  P Y+L    G   
Sbjct: 148 LYRMGVKPYYLYHFMPFSPGSSEYKASINDAISIMSKLKRRISNIALPEYVLPHMKGKFT 207

Query: 320 VKIDTH 325
           V + TH
Sbjct: 208 VPLFTH 213


>gi|111025433|ref|YP_707853.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
 gi|110824412|gb|ABG99695.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
          Length = 442

 Score =  115 bits (287), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 167/377 (44%), Gaps = 50/377 (13%)

Query: 1   MQLRHKTLTSAQ--DLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHN-PNDPI 56
           M+ R +T    Q  DL   +   +++  E++ ++N     +   V+  LI+  + P+DPI
Sbjct: 1   MKNRMRTFRGVQLADLPQLDQFTEQERHEMRVVANLLPFRVNNYVLDELIDWSSAPDDPI 60

Query: 57  ARQFIPQKE---------------------ELNILPEE-RED----PIGDNNHS------ 84
            R   P +E                     +L  + ++ R+D    P G   H+      
Sbjct: 61  FRMTFPAREMVPPRIYDLVSDALSNGVDRKQLQAIAQKCRQDLNPHPSGQREHNVPLLDG 120

Query: 85  -PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
            P+ G+ H+Y   +L+       C  YC +CFR            ++      + Y++  
Sbjct: 121 EPVAGLQHKYRQTLLVFPSQGQTCHSYCSYCFRWAQFVGDADLKFAAPGPGRMIDYLRGH 180

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINP----- 194
            ++ +V+ TGGDPLI+S   L + +  L    ++HV  +R  ++  +  P R+       
Sbjct: 181 REVTDVLLTGGDPLIMSTPVLARWVTPLLAPDLEHVTNIRIGTKALVQWPYRVTSGPDAD 240

Query: 195 ---ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDD 250
               LI+    AGK V I +H +HP E  +E A AA++RL +AG ++ +Q+ +++ +ND 
Sbjct: 241 ELLRLIEACTAAGKSVAIMLHVSHPRELENEAATAAVARLRSAGAVVRAQAPIIRHVNDS 300

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
           P+  A + R  V L I+PYY         +S F + +     I    +  +SGL +    
Sbjct: 301 PQAWATMWRHMVRLGIQPYYTFVERDTGASSFFEVPLARALTIYQEAQRVVSGLARTARG 360

Query: 311 LDLPGGYGKVKIDTHNI 327
             +    GK+ ID   +
Sbjct: 361 PVMSATPGKIAIDGETV 377


>gi|311695938|gb|ADP98811.1| lysine 2,3-aminomutase-like protein [marine bacterium HP15]
          Length = 454

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 144/328 (43%), Gaps = 47/328 (14%)

Query: 42  VIANLINPHN-PNDPIARQFIPQK---------------------EELNILPEERED--- 76
           VI  LIN    PNDPI +   PQK                     +E+  + +E  D   
Sbjct: 61  VINELINWDKVPNDPIYQLVFPQKGMLKEEHYERMATMHREGADKKEIQAVAKEIRDELN 120

Query: 77  --PIG-------DNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
             P G       + +   L G+ H+Y + +L        C  YC FCFR       K   
Sbjct: 121 PHPAGQMEMNMPELDGEVLDGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLK 180

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSR 183
           ++S + E    Y+QE +++ +++ TGGDP+++  K L + L+ L      H+Q +R  ++
Sbjct: 181 MASTEAEKLHGYLQEHTEVTDLLVTGGDPMVMKTKNLVQYLEPLLEPEFDHIQTIRIGTK 240

Query: 184 VPIVDPQRINP--------ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234
                P R           +L   L +AGK V I  H NH  E + E A  AI R+   G
Sbjct: 241 ALTFWPYRFVTDKDADELIDLFARLVDAGKHVAIMAHYNHWQEITTEIAEEAIRRIRATG 300

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
             + +Q  L+K +NDD +  A L +  V+L I PYY+         ++F + + E   I 
Sbjct: 301 AEIRAQGPLIKHVNDDADAWAKLWKKEVQLGIIPYYMFVERDTGAKNYFEVPLAEAFHIY 360

Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKI 322
               +K+SGL +      +  G GKV+I
Sbjct: 361 REAMKKVSGLARTARGPSMSAGPGKVEI 388


>gi|150399938|ref|YP_001323705.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
           SB]
 gi|150012641|gb|ABR55093.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
           SB]
          Length = 594

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 165/350 (47%), Gaps = 32/350 (9%)

Query: 10  SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPH--NPNDPIAR-QFIPQKEE 66
           + ++L   + ++K  I++ +E  N+    +TP   +L++      ND   R Q IP    
Sbjct: 206 TLENLVRVSELEKYSIEKARE--NNIPFGITPYYVSLMDNSLDRRNDHAVRAQVIPPVRY 263

Query: 67  LNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           +    E R      D +G+++ SP+  +  RYP   ++K    C   C +C R   +   
Sbjct: 264 VEKTIEARSSGKNLDFMGESDTSPVDLVTRRYPMIAIMKPYETCAQICVYCQRNWQIKDV 323

Query: 122 -KGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
               VL+SK++   A+ +  E   I E++ TGGDP ILS++ L  +L     IKH++ +R
Sbjct: 324 FSDNVLASKESVNNAINWFNENECIKELLLTGGDPAILSNEYLDYLLSEFSKIKHLERIR 383

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGI 235
             +R P+  PQRI  E  + L +  KP    + I+ H  H YE + +   AISRL N+GI
Sbjct: 384 IGTRTPVALPQRITNEFSEILGKYNKPGVREIAISTHVEHVYEVTADLRDAISRLKNSGI 443

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVEL-RIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
            + +Q V    I +      + +R  ++L  I+PYYL +      T+++R+ I    + +
Sbjct: 444 TVYNQQVFT--IENSRRFETSALRKVLKLIGIEPYYLFNTKGKEETTNYRVPI---ARAL 498

Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
              KE+            L  GY +      N+ K+G  +      H+++
Sbjct: 499 QERKEEAR----------LLPGYCRTDSTVFNVPKLGKNNLNFYQDHDVI 538


>gi|220934891|ref|YP_002513790.1| radical SAM domain-containing protein [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219996201|gb|ACL72803.1| radical SAM domain-containing protein [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 455

 Score =  114 bits (285), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 16/256 (6%)

Query: 82  NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           N   ++G+ H+Y + +L        C  YC FCFR       K   ++S   +  L Y++
Sbjct: 135 NGEVVEGLQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLRIASNQKDQVLGYLR 194

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLR---YIKHVQILRFHSRVPIVDPQRINPE- 195
           E  Q+ +++ TGGDP+++  K L + L+ L     + HVQ +R  ++     P R   + 
Sbjct: 195 EHPQVTDLLVTGGDPMVMKTKNLAQYLEPLMEDDSLAHVQTVRIGTKALTFWPYRFVTDN 254

Query: 196 -------LIQCLKEAGKPVYIAIHANHPYEFSEEAIA--AISRLANAGIILLSQSVLLKG 246
                  L+  L ++G+ V I  H NH  E  E  IA  AI RL   G+ + SQ  LL  
Sbjct: 255 DADELLDLLTRLVKSGRQVAIMAHYNHWREL-ETPIAREAIRRLRETGVEIRSQGPLLAH 313

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDDP + A L +T V+L I PYY+          +F + +     I     +++SGL +
Sbjct: 314 INDDPAVWARLWKTQVQLGIIPYYMFVERDTGARHYFEVPLARAANIYREAMKQVSGLGR 373

Query: 307 PFYILDLPGGYGKVKI 322
                 +  G GKV+I
Sbjct: 374 TARGPSMSAGPGKVEI 389


>gi|32967991|gb|AAP92506.1| lysine 2,3-aminomutase [Streptomyces vinaceus]
          Length = 445

 Score =  114 bits (285), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/324 (25%), Positives = 151/324 (46%), Gaps = 35/324 (10%)

Query: 26  DEIKEISNHYS---IALTPVIANLINPHNPND-----------PIARQFIPQKEELNIL- 70
           D++ E   H +   + +TP + N I P  P D           P+ R  +P + + ++  
Sbjct: 50  DDLTEDQEHMATMAMLITPQMLNTIAPETPADSDGYHDAFYADPVRRYMVPVRSDRDLRW 109

Query: 71  ---PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS------- 120
              P    D + +     ++G+  RYP ++L +L+  CP YC  C R ++VG        
Sbjct: 110 PSHPLSSRDSLHEAEMWVVEGLTRRYPTKVLAELVATCPQYCGHCTRMDLVGGSTPSVDK 169

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q+ T+  +   EA L +++    + +V+ +GGD   +   RL+  L  L  I  V+ +R 
Sbjct: 170 QRLTLRPADRQEAILDHLRRTPGVRDVVVSGGDVANVPWPRLESFLLRLLEIDSVRDIRL 229

Query: 181 HSRVPIVDPQR-INPELIQCLKE-----AGKPVYIAI--HANHPYEFSEEAIAAISRLAN 232
            S+  +  PQ  + P+++  L+      A + V++A+  HANH    +         L +
Sbjct: 230 ASKALVGLPQHWLQPQVVSGLENVAGVAARRGVHLAVHTHANHVQSVTPLVAEGARALLD 289

Query: 233 AGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
           AG+  + +Q VL++G+ND    L +L      E  I PYY +  D+  G  H+R ++ E 
Sbjct: 290 AGVRDVRNQGVLMRGVNDSTAALLDLCFALQDEAGILPYYFYMCDMVPGAEHWRTSLAEA 349

Query: 291 QKIVASLKEKISGLCQPFYILDLP 314
           Q +  ++   + G   P  + D+P
Sbjct: 350 QDLQHAIMGYLPGYATPRIVCDVP 373


>gi|147919038|ref|YP_687235.1| hypothetical protein RRC148 [uncultured methanogenic archaeon RC-I]
 gi|110622631|emb|CAJ37909.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 633

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/325 (26%), Positives = 152/325 (46%), Gaps = 18/325 (5%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPI 56
            Q++H  LT  + +     + +++I  +K    H   + +TP   +L N       +  +
Sbjct: 236 WQMKH-ILTDYKTISELVRLDQDEISALKFAQEHNIPVQITPYYLSLFNKAGRSALDRAV 294

Query: 57  ARQFIPQKEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
             Q +P       + + R+     D +G+   SP++GI  RYP  ++LK    CP  C +
Sbjct: 295 RAQVLPSMNYCKTIVKNRQSAADMDFMGEKWTSPVEGITRRYPQILILKPYDSCPQICVY 354

Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           C R   + S     +     + A+ +I++   I EV+ TGGDPL ++ + +  +L+ +  
Sbjct: 355 CQRNWEIKSIDEAEVKRDTIQNAIQWIKDNESISEVLITGGDPLTMNDQYIDSLLRKVSG 414

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAI 227
           I HV+ LR  +R P+  P RI P+L + LK+  +P    V +  H  HP E + E++ A+
Sbjct: 415 IDHVERLRIGTRTPVTVPFRITPKLAEILKQYHQPGAREVCVVTHFEHPMEMTPESLQAV 474

Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
             +  AG+ + +Q V     +   EI A + +      + PYY  +      T  FR+ I
Sbjct: 475 QTIRQAGMSVYNQQVFTYYNSRKFEI-AKMRKVLKICGVDPYYTFNTKGKEETMDFRVPI 533

Query: 288 ---EEGQKIVASLKEKISGLCQPFY 309
              E+ +K  A L+  I    +P +
Sbjct: 534 ARVEQERKEEARLQPGIVRTDEPVF 558


>gi|84496424|ref|ZP_00995278.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649]
 gi|84383192|gb|EAP99073.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649]
          Length = 484

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 145/299 (48%), Gaps = 23/299 (7%)

Query: 54  DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           DP+ R  +P    ++ +    P    D + +++   ++G+ HRYP ++L ++L  CP YC
Sbjct: 115 DPVRRYMLPVFSDRRTDWPSHPFAARDSLHEHDMWAVEGLTHRYPTKVLAEMLPTCPQYC 174

Query: 110 RFCFRREMVGSQKGTVLSSK------DTEAA-LAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C R ++VG+    ++  K      D  AA L Y+Q   Q+ +V+ +GGD   +  K L
Sbjct: 175 GHCTRMDLVGNSTAQIVKLKLAGKPVDRHAAMLDYLQRTPQVRDVVVSGGDVANMPWKNL 234

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCL-------KEAGKPVYIAIHAN 214
           +  L  L  I +++ +R  ++  +  PQ  + P++++ +       +  G  + I  H N
Sbjct: 235 EGFLDKLMRIDNIRDIRLATKALMGLPQHWLQPDVVEGVARVSALARSRGVSLAIHTHVN 294

Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272
           H    +     A   +  AG+  + +Q VL++GIND  + L +L      E  I PYY +
Sbjct: 295 HAQSVTPLVADASKAMLEAGVRDVRNQGVLMRGINDTSKDLLDLCFALQDEAMITPYYFY 354

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP--GGYGKVKIDTHNIKK 329
             D+   + H+RL + E Q +  S+   + G   P  + D+P  G     ++DT++  K
Sbjct: 355 MCDMIPFSEHWRLALHEAQHLQHSIMGYLPGFATPRIVCDVPFVGKRWVHQVDTYDRDK 413


>gi|149194496|ref|ZP_01871592.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus
           TB-2]
 gi|149135240|gb|EDM23720.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus
           TB-2]
          Length = 414

 Score =  114 bits (284), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/344 (26%), Positives = 154/344 (44%), Gaps = 38/344 (11%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQ 59
           M+ +  ++ S + L     + KE I+ IK +S  +   +   IA+L++  N  +DPI R 
Sbjct: 1   MRYKSYSVKSFEKLPFVRKMDKEDIENIKVVSKIFPFKINEYIASLVDWDNYKDDPIFRL 60

Query: 60  FIPQKE------------------------ELNILPEEREDPIGDNNHSPLKGIVHRYPD 95
             P K+                        +LN  P  + + I + N   L+G  H+Y +
Sbjct: 61  IFPHKDMLDSKDFEKLKNSNDEKLIYDIRMKLNPHPAGQMENIPEINGKRLEGSQHKYKE 120

Query: 96  RILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
            IL   K    C  YC FCFR            +SK+ E  + YI+    I +V+FTGGD
Sbjct: 121 TILFFPKQGQTCHAYCSFCFRWPQFIGINELKFASKEVEILIEYIKANPTITDVLFTGGD 180

Query: 154 PLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EA 203
           PL++S K L+  +K L    I H++ +R  ++     P R        EL+   K   ++
Sbjct: 181 PLVMSTKLLKAYIKPLIEAKIPHLKNIRIGTKALSFWPYRFLTDEDANELLDLFKYIVDS 240

Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           G  +    H NH  E  ++E   A+ ++ + G I+ +QS LL+ IND  ++   + +  V
Sbjct: 241 GYHLAFMAHFNHYKELQTDEVKEAVKKILSTGAIIRTQSPLLRHINDSSKVWEIMWKEQV 300

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
            L + PYY+          +F L + +  +I       +SGL +
Sbjct: 301 ALNMIPYYMFVARDTGAKRYFELPLSKAWEIYKGAISNVSGLAR 344


>gi|193211898|ref|YP_001997851.1| radical SAM domain-containing protein [Chlorobaculum parvum NCIB
           8327]
 gi|193085375|gb|ACF10651.1| Radical SAM domain protein [Chlorobaculum parvum NCIB 8327]
          Length = 433

 Score =  113 bits (283), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 159/350 (45%), Gaps = 46/350 (13%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIAR 58
           +  +  T  + Q L   + I  EQ+  IK ++  Y   +   +A NLI+  N P+DP+ R
Sbjct: 2   LTFQSYTAENIQQLPQYDTIPPEQLHAIKVVAEVYPFRVNSHVAENLIDWSNIPDDPMFR 61

Query: 59  QFIPQ--------------------------KEELNILPEEREDPIGDN-------NHSP 85
              PQ                          +E   I   +  +P G         +  P
Sbjct: 62  LSFPQAGMLSGEDFRTISDLVLSDADSQLIRQEARKIQLRQNPNPAGQMELNTPRLDGEP 121

Query: 86  LKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G+ H+Y + +L   L   VC  YC +CFR       +    +++  +  + Y++   +
Sbjct: 122 LHGMQHKYRESVLFFPLEAQVCHAYCTYCFRWPQFSGLESLKFANESVDKLIDYLRSHPE 181

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-----LIQ 198
           + +VIFTGGDP+++S + ++K ++ L  +  ++ +R  ++     P R   +     LI+
Sbjct: 182 VKDVIFTGGDPMVMSTELIEKYMRPLLDVPTLRTIRIGTKSLSWWPGRFTTDSDADQLIR 241

Query: 199 CLKE---AGKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
             +E   +GK + I  H +HP E    EA+ A+ R+ + G ++ SQS +++ +NDD E+ 
Sbjct: 242 FFEEVVTSGKHLAIMAHMSHPREIDNPEAVDAVRRIRSTGAVIRSQSPVVRHVNDDSEVW 301

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
             + +  V+L + PYY+          +F + + E   I      ++SGL
Sbjct: 302 EEMWQKQVQLGVIPYYMFLERDTGPKHYFEVPLAEALDIYNGAYRQMSGL 351


>gi|120556236|ref|YP_960587.1| radical SAM domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120326085|gb|ABM20400.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8]
          Length = 454

 Score =  113 bits (283), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/328 (28%), Positives = 141/328 (42%), Gaps = 47/328 (14%)

Query: 42  VIANLINPHN-PNDPIARQFIPQK--------EELNILPEERED---------------- 76
           VI  LIN    PNDPI +   PQK        E +  L  E  D                
Sbjct: 61  VINELINWDKVPNDPIYQLVFPQKGMLKDEHYERMAQLHREGADKKDIQAAAKEIRDALN 120

Query: 77  --PIG-------DNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
             P G       + +   L G+ H+Y + +L        C  YC FCFR       K   
Sbjct: 121 PHPAGQMEMNMPELDGEVLDGVQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLK 180

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSR 183
           ++S D E    Y+QE +++ +++ TGGDP+++  K L + L+ L      H+Q +R  ++
Sbjct: 181 MASTDAEKLHGYLQEHTEVTDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTK 240

Query: 184 VPIVDPQRINP--------ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234
                P R           EL   L + GK V I  H NH  E + + A  AI R+   G
Sbjct: 241 ALTFWPYRFVTDKDADELIELFARLVDGGKHVAIMAHYNHWQEITTDIAEEAIRRIRATG 300

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
             + +Q  L+K +NDD +  A L +  V+L I PYY+         ++F + + E   I 
Sbjct: 301 AEIRAQGPLIKHVNDDADAWAKLWKKEVKLGIIPYYMFVERDTGAKNYFEVPLAEAYHIY 360

Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKI 322
               +++SGL +      +  G GKV+I
Sbjct: 361 REAMKQVSGLARTARGPSMSAGPGKVEI 388


>gi|218781690|ref|YP_002433008.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218763074|gb|ACL05540.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 594

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 128/265 (48%), Gaps = 18/265 (6%)

Query: 37  IALTPVIANLINPHNPND---PIARQFIPQKEELNILPEERE------DPIGDNNHSPLK 87
             +TP  A+L++          +  Q IP    +  L E R+      D + +N+ SP++
Sbjct: 230 FGITPYYASLMDEKEDRKRDYAVRAQVIPPLNYIEKLWEARQRSEASMDFMLENDTSPIE 289

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRR---EMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           GI  RYP  ++LK +  CP  C +C R    E V SQ    LS K  E A+ +I +  +I
Sbjct: 290 GITRRYPMIVILKPILTCPQICVYCQRNWEIEDVYSQTA-ALSQKKLERAIQWIADTPEI 348

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL---IQCLK 201
            EV+ TGGDP +LS+ R++ +L  L  IKH++ +R  +R P+  PQRI   L   I    
Sbjct: 349 REVLVTGGDPFLLSNSRIENLLFRLSSIKHIERIRIGTRTPVTLPQRITESLARDIGHFH 408

Query: 202 EAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
           E GK  + +  H  HPYE +  A+ A+ ++   G+ + +Q V     N      A L   
Sbjct: 409 EPGKREITVITHFEHPYEITPNAMEAVQKIRRLGMSVKNQMVFTT-FNSRKFEAAVLRHK 467

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRL 285
              + + PYY  +      T  +R+
Sbjct: 468 LSLIGVSPYYTFNTKGKEETEDYRV 492


>gi|328949906|ref|YP_004367241.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884]
 gi|328450230|gb|AEB11131.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884]
          Length = 441

 Score =  113 bits (282), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 11/252 (4%)

Query: 82  NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           N   L G+ H+Y + +L        C  YC +CFR       +     +++T+  +AY+Q
Sbjct: 127 NGRKLPGLQHKYHETVLFFPGQGQTCHAYCTYCFRWAQFIGLQDIKFEARETDDLVAYLQ 186

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---- 195
              ++ +V+ TGGDP+I+  K L+K L+ L  I  ++ +R  ++     PQR   +    
Sbjct: 187 AHPEVTDVLVTGGDPMIMRTKILRKYLEPLLEIPTLRTIRIGTKSLAYWPQRYVTDADAD 246

Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDD 250
                 + +  AGK + I  H++HP E +   A  AI R+   G ++ +Q+ L+K +NDD
Sbjct: 247 DALRFFEEIVAAGKHLAIMAHSSHPVELATPIAQEAIRRVRETGAVIRTQAPLIKHVNDD 306

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
           P++ A   R  V+L + PYY+          +F + +   Q+I A+   ++SGL +    
Sbjct: 307 PDVWAEKWRQEVKLGMIPYYMFVERDTGPKRYFEVPLARAQEIFAAAWRQVSGLARTVRG 366

Query: 311 LDLPGGYGKVKI 322
             +    GKV+I
Sbjct: 367 PSMSAFPGKVRI 378


>gi|56460615|ref|YP_155896.1| lysine 2,3-aminomutase related protein enzyme [Idiomarina
           loihiensis L2TR]
 gi|56179625|gb|AAV82347.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina
           loihiensis L2TR]
          Length = 448

 Score =  112 bits (281), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 154/345 (44%), Gaps = 51/345 (14%)

Query: 27  EIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
           E+K ++N     +   + N LI+  N PNDP+ +   PQK+ L     +R   +    H+
Sbjct: 41  EMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLTFPQKDMLEPSAYQRMADLMSGKHT 100

Query: 85  ---------------------------------PLKGIVHRYPDRILL--KLLHVCPVYC 109
                                            PL G+ H+Y + +L        C  YC
Sbjct: 101 TNEVFDLATQLRDEMNPHPAGQMQMNVPHVDGEPLPGMQHKYRETVLFFPAQGQYCHSYC 160

Query: 110 RFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
            FCFR  + VG  K T  +S D +    Y+ +  ++ +++ TGGDP+++  ++L   L+ 
Sbjct: 161 TFCFRWAQFVG--KATRFNSNDADQLHRYLAQHKEVTDLLVTGGDPMVMRTRKLAHYLEG 218

Query: 169 LRY--IKHVQILRFHSRVPIVDPQRI--NPELIQCLK------EAGKPVYIAIHANHPYE 218
           L     +H++ +R  ++     P R   +P+    L+      + GK V I  H NHP E
Sbjct: 219 LLQPEFEHIKTIRIGTKSLTFWPYRFITDPDADDLLRLLERLVDGGKHVSIMAHLNHPNE 278

Query: 219 FSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
              E    AI RL   G+ +  Q+ LLK INDDP++ A++    V+L + PYY+      
Sbjct: 279 LRTEVCQEAIRRLRATGVQIRCQAPLLKHINDDPDVWASMWEKQVQLGLIPYYMFVERDT 338

Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
               +F + +E   +I     +++SG+ +      +  G GKV++
Sbjct: 339 GAKRYFEVPLERTWEIFQKAYQQVSGIARTVRGPSMSAGPGKVEV 383


>gi|108758698|ref|YP_632865.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
 gi|108462578|gb|ABF87763.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
          Length = 456

 Score =  112 bits (281), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 149/301 (49%), Gaps = 22/301 (7%)

Query: 36  SIALTPVIANLINPHN-PNDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIV 90
           S+ + P + N +N  +   DP+ R  +P    +  E    P+   D + + +   ++G+ 
Sbjct: 90  SLLVPPQMLNTMNLEDLWRDPVRRYMLPAYADRLTEWTNHPKASRDSLHEQDMWVVEGLT 149

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEA-ALAYIQEKSQ 143
           HRYP ++L ++L  CP YC  C R ++VG+    V      +  KD  A  L Y++    
Sbjct: 150 HRYPTKVLAEMLPTCPQYCGHCTRMDLVGNDVPQVSKHKFGIGPKDRYAQMLDYLRRTPT 209

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCLK- 201
           + +V+ +GGD   L  ++L+  + +L  I +++ +R  S+  +  PQ  +   ++Q L  
Sbjct: 210 VRDVVVSGGDIANLPIQQLEPFVSSLMDIPNIRDIRLASKGLMAIPQHFLQDSVLQGLDR 269

Query: 202 ------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEIL 254
                 E G  + +  H NH  + +     A+ +L   G   + +Q VLL+G+ND P+ L
Sbjct: 270 LAKKAVERGVDLALHTHVNHAQQLTPLVGKAVRKLLEMGFRDVRNQGVLLRGVNDSPQAL 329

Query: 255 ANLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            +L  T ++  +I PYY +  D+   + H+RL++ + Q++   +   + G   P  + D+
Sbjct: 330 LDLCFTLLDHAKILPYYFYMCDMIPNSEHWRLSVAQAQQLQHDIMGYMPGFATPRIVCDV 389

Query: 314 P 314
           P
Sbjct: 390 P 390


>gi|124004604|ref|ZP_01689449.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina
           ATCC 23134]
 gi|123990176|gb|EAY29690.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina
           ATCC 23134]
          Length = 448

 Score =  112 bits (280), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 13/263 (4%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
           + +D + + +   L G+ H+Y + +L        C  YC FCFR            + ++
Sbjct: 110 QMKDNVPEVDGVKLTGVQHKYRETMLFFPSQGQTCHAYCTFCFRWPQFVGMNELKFAMRE 169

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVD 188
           TE  + YI+    I +++FTGGDPLI+  K L   +  L    + +++ +R  ++     
Sbjct: 170 TELLVKYIKVNPHITDILFTGGDPLIMKTKILASYVDALLEADLPNLKTIRIGTKALGYW 229

Query: 189 PQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLS 239
           PQR   +        L + + +AGK +    H NH  E  +EE   AI R+ N G  + +
Sbjct: 230 PQRFTSDTDADDLLRLFERVNKAGKHLAFMSHFNHGRELETEEVQKAIGRILNTGTAIRT 289

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QS ++K IND  E  A + R  V+L   PYY+          +F + ++   +I     +
Sbjct: 290 QSPIMKNINDSAEAWAYMWRKQVDLGCVPYYMFLARDTGAQDYFAIELDRAWQIFQQSYQ 349

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++SG+C+      +  G GKV++
Sbjct: 350 QVSGVCRTVRGPSMSAGPGKVQV 372


>gi|295401597|ref|ZP_06811565.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976364|gb|EFG51974.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 218

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 95/159 (59%), Gaps = 6/159 (3%)

Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEA 223
           +R I HV+I+RF S++P+ +P RI  + EL+   ++   P   +Y+  H NHP E +EEA
Sbjct: 1   MRAIDHVKIIRFGSKLPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEA 60

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
             A   L +AG+I+++Q+ +LKGINDDPE+LA L+       + PYY       AG S F
Sbjct: 61  RKAFQALHDAGVIVVNQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDF 120

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            LT+E+  +IV   K + SGL +   ++ +    GK++I
Sbjct: 121 VLTLEKVYQIVEQAKARTSGLGKRVRLV-MSHSSGKIEI 158


>gi|326331434|ref|ZP_08197724.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium
           Broad-1]
 gi|325950690|gb|EGD42740.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium
           Broad-1]
          Length = 465

 Score =  112 bits (279), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 21/282 (7%)

Query: 54  DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           DPI    IP    ++ +    P+   D + +++    +G+ HRYP ++L +LL  CP YC
Sbjct: 120 DPIRHYMIPVFSDRRTDWPSHPQASRDSLHEHDMWVAEGLTHRYPTKVLAELLSTCPQYC 179

Query: 110 RFCFRREMVGSQKGTVLSSKDT-------EAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C R ++VG+    +   K T       EA L Y++   Q+ +V+ +GGD   L   RL
Sbjct: 180 GHCTRMDLVGNSTPVIDKLKLTGKPVDRHEAMLDYLRNTPQVRDVVVSGGDVANLPWPRL 239

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHAN 214
           +  L  L  I +++ +R  ++  I  PQ    E        +    +E G  + +  HAN
Sbjct: 240 EDFLTKLMAIDNIRDIRLATKGLIGLPQHWLQEPLLEGMSRVTSIARERGVSLAVHTHAN 299

Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANL-MRTFVELRIKPYYLH 272
           H    +     A   L  AG+  + +Q VLL G+N D   L +L  R     +I PYY +
Sbjct: 300 HANSVTPLVAEASKALMAAGVRDVRNQGVLLAGVNADSHSLLDLCFRLLDGAQIMPYYFY 359

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
             D+   + H+R+++ + Q++   +   + G   P  + D+P
Sbjct: 360 MCDMIPFSEHWRVSVADAQRMQHDIMGYLPGFATPRIVCDVP 401


>gi|85711269|ref|ZP_01042328.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica
           OS145]
 gi|85694770|gb|EAQ32709.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica
           OS145]
          Length = 457

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 51/345 (14%)

Query: 27  EIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
           E+K ++N     +   + N LI+  N PNDP+ +   PQK+ L+    +R   +    H+
Sbjct: 50  EMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLTFPQKDMLDPSAFQRMADLMSGKHT 109

Query: 85  ---------------------------------PLKGIVHRYPDRILL--KLLHVCPVYC 109
                                            PL G+ H+Y + +L        C  YC
Sbjct: 110 TNEVFDLATQLRQEMNPHPAGQMQMNVPHVDGEPLPGMQHKYRETVLFFPAQGQYCHSYC 169

Query: 110 RFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
            FCFR  + VG  K T  +S D +    Y+ +  ++ +++ TGGDP+++  ++L+  L+ 
Sbjct: 170 TFCFRWAQFVG--KATRFNSNDADQLHRYLAQHKEVTDLLVTGGDPMVMRTRKLKHYLEG 227

Query: 169 LRY--IKHVQILRFHSRVPIVDPQRI--NPE------LIQCLKEAGKPVYIAIHANHPYE 218
           L      H++ +R  ++     P R   +P+      L++ L   GK V I  H NH  E
Sbjct: 228 LLQPEFDHIKTIRIGTKALTFWPYRFITDPDADELMRLLEKLVRGGKHVSIMAHLNHHNE 287

Query: 219 FSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
              E    AI RL   G  +  Q+ LL+ INDDP++ A++    V+L + PYY+      
Sbjct: 288 LRTEVCEEAIRRLRATGAQIRCQAPLLRHINDDPKVWADMWEREVQLGMIPYYMFVERDT 347

Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
               +F + +E   ++     +++SG+ +      +  G GKV++
Sbjct: 348 GAKRYFEVPLERTWEVFQQAYQQVSGIARTVRGPSMSAGPGKVEV 392


>gi|108759631|ref|YP_634392.1| hypothetical protein MXAN_6263 [Myxococcus xanthus DK 1622]
 gi|108463511|gb|ABF88696.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 442

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 11/253 (4%)

Query: 82  NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           N  P+ G+ H+Y + +L+  K    C  YC +CFR            +S++ E  + YI+
Sbjct: 132 NEEPVPGLQHKYKETVLIFPKQGQTCHAYCTYCFRWAQFVGDADLKFASREIEPLVNYIR 191

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---- 195
              ++  V+FTGGDP+I++   L K ++ L  I+H++ +R  ++     PQR   +    
Sbjct: 192 AHPEVTNVLFTGGDPMIMTEAVLAKYIEPLLDIEHLEAIRIGTKALAYWPQRFVTDSDAD 251

Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
               L + +  +GK +    H +HP E   E +  A+ R+   G ++ +Q+ L++ IND 
Sbjct: 252 DILRLFEKVVASGKSLAFMAHFSHPNEMVPEIVQEAVRRIRGTGAVIRTQAPLIRTINDT 311

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
           P    ++ RT +   + PYY+          +F + + E   I  +  + +SGL +    
Sbjct: 312 PGTWESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYDIFRNAFQSVSGLARTVRG 371

Query: 311 LDLPGGYGKVKID 323
             +    GKV +D
Sbjct: 372 PSMSATPGKVCVD 384


>gi|300087493|ref|YP_003758015.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527226|gb|ADJ25694.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 440

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 12/237 (5%)

Query: 82  NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYI 138
           N   L GI H+Y + +L        C  YC FCFR  + V   +   ++S++ +  + Y+
Sbjct: 117 NGESLPGIQHKYRETVLFFPSQGQTCHAYCTFCFRWPQFVKGMEDLKIASREIDTLVEYL 176

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--- 195
           + + ++ +V+ TGGDPL++    L + ++ L  +  ++ +R  +R     P R   +   
Sbjct: 177 KSRPEVTDVLVTGGDPLVMKAGLLARYIEPLLVLPGIRTIRIGTRSLSFWPYRYVTDDDA 236

Query: 196 -----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGIND 249
                L + ++EAGK +    H NHP E   E +  A+ R+   G ++ +QS LL+ IND
Sbjct: 237 EELLTLFRRVREAGKHLAFMAHFNHPVELLPEIVPEAVRRIRETGAVIRTQSPLLRHIND 296

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
              + A + R  V++   PYY+          +F +T+++  ++     + ISG+C+
Sbjct: 297 SEALWAQMWRRQVDMGCVPYYMFMARDTGAQRYFSVTLQDAWRVYQGAFQAISGICR 353


>gi|269126573|ref|YP_003299943.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183]
 gi|268311531|gb|ACY97905.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183]
          Length = 456

 Score =  110 bits (276), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 138/301 (45%), Gaps = 25/301 (8%)

Query: 39  LTPVIANLINPHNPN----DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIV 90
           +TP + N ++         DP+ R  +P    ++ +    P    D + + +   ++G+ 
Sbjct: 88  VTPQMLNTMDTSTTEAFYADPVRRYMLPVASDRRTDWPSHPCATRDSLHEADMWAVEGLT 147

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAYIQEKSQ 143
           HRYP ++L +LL  CP YC  C R ++VG+    V   + T       EA L Y++    
Sbjct: 148 HRYPTKVLAELLSTCPQYCGHCTRMDLVGTSTPAVAKHRFTARPADRHEAMLEYLRRTPT 207

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-------RINPE- 195
           + +V+ +GGD   L   RL+  +  L  I  ++ +R  ++  +  PQ       R   E 
Sbjct: 208 VRDVVVSGGDVANLPWPRLEAFVDRLLDIDSIRDIRLATKALMALPQHWLQDEVRAGMER 267

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEIL 254
           L    +  G  + +  H N     +     A   L  AG+  + +Q VLL G+ND P  L
Sbjct: 268 LAAKARRRGVALAVHTHVNTARSLTPLVARAARGLLEAGVRDVRNQGVLLHGVNDSPAAL 327

Query: 255 ANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            +L    + E +I PYYL+  D+  G+ H+RL +   Q++  ++   + G   P  + D+
Sbjct: 328 LDLSFALLDEAQIMPYYLYMCDMIPGSEHWRLPLWRAQELQHAIMGYLPGFATPRIVCDV 387

Query: 314 P 314
           P
Sbjct: 388 P 388


>gi|30249230|ref|NP_841300.1| hypothetical protein NE1247 [Nitrosomonas europaea ATCC 19718]
 gi|30180549|emb|CAD85158.1| DUF160 [Nitrosomonas europaea ATCC 19718]
          Length = 452

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 13/252 (5%)

Query: 84  SPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
            PL G  H+Y + +L       VC  YC FCFR       K    +S +      Y+   
Sbjct: 137 EPLPGTQHKYRETVLFFPSQGQVCHSYCTFCFRWAQFIGDKELRFASNEAGNLHKYLAGH 196

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE---- 195
             + +++ TGGDP+++    L+  L+ +    ++HVQ +R  ++     PQR   +    
Sbjct: 197 KDVTDLLMTGGDPMVMKTHHLKAYLEAMLRPALEHVQNIRIGTKSLTFWPQRYVTDEDAH 256

Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
               L++ L +AGK V +  H NH  E     +  A+ R+  AG+++ +Q+ +++ INDD
Sbjct: 257 ELLALLERLVKAGKHVALMAHFNHWREMDTPIVREAVRRIRAAGVVIRAQAPIVRNINDD 316

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
           P + A + RT V + I PYY+          +F + +E   +I     +++SGL +    
Sbjct: 317 PAVWAKMWRTQVGMGIIPYYMFVERDTGAKRYFEVPLERTYQIYREAIQQVSGLARTVRG 376

Query: 311 LDLPGGYGKVKI 322
             +  G GKV+I
Sbjct: 377 PSMSAGPGKVEI 388


>gi|72160676|ref|YP_288333.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX]
 gi|71914408|gb|AAZ54310.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX]
          Length = 453

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 63/253 (24%), Positives = 125/253 (49%), Gaps = 11/253 (4%)

Query: 82  NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +  P+ G+ H+YP+ +L   K    C  YC +CFR      +    ++S + +  +AY++
Sbjct: 131 DDEPMPGVQHKYPETVLFFPKQGQTCHSYCTYCFRWAQFVGEPDLKMASDEIDRLVAYLR 190

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE-- 195
           +  ++  V+ TGGDP+I+    L++ ++ L  ++ ++ +R  ++     PQR   +P+  
Sbjct: 191 QHPEVTGVLLTGGDPMIMGEAVLRRYIEPLLEVETLESIRIGTKALAYWPQRFVTDPDAD 250

Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
               L + +  +GK +    H +HP E   + +  A+ R+ + G ++ +Q+ L++ IND 
Sbjct: 251 DTLRLFEQVVNSGKNLAFMAHFSHPRELEPDIVREAVRRIRDTGAVIRTQAPLIRTINDS 310

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
            E  A + RT V L + PYY+          +F + + +  +I       +SGL +    
Sbjct: 311 SETWATMWRTQVRLGMIPYYMFVERDTGPQDYFAVPLAQAYEIFRKAYNSVSGLARTVRG 370

Query: 311 LDLPGGYGKVKID 323
             +    GKV +D
Sbjct: 371 PSMSATPGKVCVD 383


>gi|213585072|ref|ZP_03366898.1| hypothetical protein SentesTyph_29075 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 219

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 3/147 (2%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL +   C V CR
Sbjct: 67  NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR    ++     + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L 
Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELI 197
            IKHV+ LR HSR+PIV P RI  EL+
Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELV 210


>gi|271970119|ref|YP_003344315.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021]
 gi|270513294|gb|ACZ91572.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021]
          Length = 461

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/293 (25%), Positives = 139/293 (47%), Gaps = 12/293 (4%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEERED-PIGDNNHSPLKGIVHRYPDRILL-- 99
           +A L+    PN  I       +  LN  P  + D  +      P+ G+ H+YP+ +L   
Sbjct: 85  LAGLLRAGAPNAEIQAAAREVRMRLNPHPAGQLDLNVPRVGEDPMPGMQHKYPETVLFFP 144

Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
           K    C  YC +CFR      +     +S D +  + Y+++  ++  V+FTGGDP+I+S 
Sbjct: 145 KQGQTCHAYCTYCFRWAQFIGEPDLKFASDDVDNLVGYLKKHPRVTSVLFTGGDPMIMSE 204

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK------EAGKPVYIAI 211
             L++ L+ L  ++ ++ +R  ++     PQR   +P+    L+      +AGK +    
Sbjct: 205 SVLRRYLEPLLELEQLESIRIGTKSLAYWPQRFVSDPDAADTLRLFASVVDAGKNLAFMA 264

Query: 212 HANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           H +HP E  S  A AA++ +   G ++ +Q+ L++ INDDP   +++ R  + + + PYY
Sbjct: 265 HFSHPREMESPVAEAAVAGILATGAVIRTQAPLIRTINDDPATWSSMWRRQLTMGMVPYY 324

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +          +F + +    +I       +SGLC+      +    GKV +D
Sbjct: 325 MFVERDTGPQDYFAVPLARAHEIFRDAYASVSGLCRTVRGPSMSATPGKVCVD 377


>gi|114320341|ref|YP_742024.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226735|gb|ABI56534.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 456

 Score =  110 bits (274), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 13/250 (5%)

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L+G+ H+Y + +L       VC  YC FCFR       K    +S + E   AY+++  +
Sbjct: 139 LEGMQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFVGDKDLQFASNEAERLHAYLRDHRE 198

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------ 195
           + +++ TGGDP+++  ++L++ L  L    ++HVQ +R  ++     P R   +      
Sbjct: 199 VSDLLLTGGDPMVMKTRKLEEYLDPLLAADLEHVQTVRLGTKALTFWPYRFVTDKDADDL 258

Query: 196 --LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPE 252
             L + L  +G+ V +  H NHP E     A  AI R+ + G+ + +Q  LL  IND  E
Sbjct: 259 LRLFERLVNSGRHVALMAHYNHPQELKTPIAEEAIRRIRDTGVEIRAQGPLLAHINDSSE 318

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
             A L R  V L I PYY+          +F + +    +I     +++SGL +      
Sbjct: 319 AWAELWRKQVRLGIIPYYMFVERDTGARHYFEVPLARAWEIYRDAMKQVSGLGRTARGPS 378

Query: 313 LPGGYGKVKI 322
           +  G GKV++
Sbjct: 379 MSAGPGKVEV 388


>gi|297563081|ref|YP_003682055.1| hypothetical protein Ndas_4154 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847529|gb|ADH69549.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 454

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 11/253 (4%)

Query: 82  NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           N  P+ G+ H+Y + +L   K    C  YC +CFR            +S + +  + Y++
Sbjct: 132 NEEPIPGVQHKYKETVLFFPKQGQTCHAYCTYCFRWAQFVGDADLKFASSEIDQLVDYVR 191

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE-- 195
              ++  V+FTGGDP+I+    + K ++ L  I+H++ +R  ++     PQR   +P+  
Sbjct: 192 SHPEVTSVLFTGGDPMIMGEGVISKYIEPLLEIEHLEAIRIGTKALAYWPQRFVTDPDAD 251

Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDD 250
               L + +  +GK +    H +HP E   E A  A+ R+   G ++ +Q+ L++ INDD
Sbjct: 252 DTLRLFEKVVASGKNLAFMAHFSHPNEMRPELAQEAVRRIRATGAVIRTQAPLIRTINDD 311

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
             +  ++ RT +   + PYY+          +F + + E  +I     + +SGL +    
Sbjct: 312 SAVWESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYEIFRGAYKSVSGLARTVRG 371

Query: 311 LDLPGGYGKVKID 323
             +    GKV +D
Sbjct: 372 PSMSATPGKVCVD 384


>gi|291301420|ref|YP_003512698.1| lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728]
 gi|290570640|gb|ADD43605.1| Lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728]
          Length = 475

 Score =  110 bits (274), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 72/282 (25%), Positives = 134/282 (47%), Gaps = 21/282 (7%)

Query: 54  DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           DPI R  +P    ++ +    P    D + +++    +G+ HRYP ++L +LL  CP YC
Sbjct: 110 DPIRRYMLPVFSDRRTDWPSHPHATRDSLHEHDMWVAEGLTHRYPTKVLAELLSTCPQYC 169

Query: 110 RFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C R ++VG+   T+   K         +A + Y+Q    + +V+ +GGD   +  K L
Sbjct: 170 GHCTRMDLVGNSTPTIDKLKLKLKPMARYDAMIEYLQSHPGVRDVVVSGGDVANVPWKNL 229

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCL-------KEAGKPVYIAIHAN 214
           +  +  L  I+ ++ +R  ++  +  PQ  +  +++  +       +E G  + I  H N
Sbjct: 230 ENFISRLLEIESIRDIRLATKALMGLPQHWLQDDVVDGMGRVATVARERGVNLAIHTHVN 289

Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272
           H    +     A   + +AG+  + +Q VL+ G+N+ PE L +L      E  I PYY +
Sbjct: 290 HVQSLTPTVARAARAMLDAGVRDVRNQGVLMNGVNNSPEALLDLCFALQGEANILPYYFY 349

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
             D+   + H+R ++ E Q +  ++   + G   P  I D+P
Sbjct: 350 MCDMIPNSEHWRTSVSEAQALQTAIMGYLPGYATPRIICDVP 391


>gi|292491849|ref|YP_003527288.1| L-lysine 2,3-aminomutase [Nitrosococcus halophilus Nc4]
 gi|291580444|gb|ADE14901.1| L-lysine 2,3-aminomutase, putative [Nitrosococcus halophilus Nc4]
          Length = 446

 Score =  109 bits (273), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 148/329 (44%), Gaps = 49/329 (14%)

Query: 42  VIANLINPHN-PNDPIARQFIPQKE--------------------------------ELN 68
           VI  LI+  N P+DPI +  IPQ++                                ELN
Sbjct: 63  VINELIDWGNVPDDPIFQLTIPQRDMLAPEHFNRVASAIIRGADRKTLDAVIREVRAELN 122

Query: 69  ILPE-EREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
             P  + ED I   N   ++G+ H+Y + +L       VC  YC FCFR       K   
Sbjct: 123 PHPAGQMEDNIPTLNGERVEGLQHKYRETVLFFPSSGQVCHSYCTFCFRWAQFVGDKELK 182

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSR 183
           +++K+T    AY++   ++ +V+ TGGDPL++  + L+  L+ L      HV+ +R  ++
Sbjct: 183 IAAKETHQLQAYLRAHPEVTDVLVTGGDPLVMKTRNLRAYLEPLLGEAFSHVKTIRIGTK 242

Query: 184 VPIVDPQRI--------NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA--AISRLANA 233
                PQR            L + ++ AGK + +  H NH  E  E AIA  AI R+   
Sbjct: 243 SLTFWPQRFVTDDDADDLLALFEEIQGAGKHLALMAHYNHWQEL-EPAIAREAIRRVRAT 301

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           G  + SQ  LL  INDD  I A L RT V L I PYY+         ++F + + +  +I
Sbjct: 302 GAQIRSQGPLLAHINDDANIWARLWRTQVGLGIIPYYMFVERDTGARNYFEVPLIKAWQI 361

Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKI 322
                +K+SG+ +      +    GKV+I
Sbjct: 362 YRDAIQKVSGIGRTARGPSMSAHPGKVEI 390


>gi|291301955|ref|YP_003513233.1| hypothetical protein Snas_4495 [Stackebrandtia nassauensis DSM
           44728]
 gi|290571175|gb|ADD44140.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM
           44728]
          Length = 432

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 62/249 (24%), Positives = 122/249 (48%), Gaps = 11/249 (4%)

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + G+ H+YP+ +L   +    C  YC +CFR      +    ++S D +A + YI+   +
Sbjct: 131 IPGMQHKYPETVLFFPQQGQTCHAYCTYCFRWAQFVGESDLKMASNDIDALVGYIKAHPE 190

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK 201
           I  V+ TGGD +I+    L++ ++ L  ++ ++ +R  ++     PQR   +P+    L+
Sbjct: 191 ITSVLITGGDAMIMGAPVLRRYIEPLIQLEQLESIRMGTKALAYWPQRFVTDPDADDTLR 250

Query: 202 ------EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEIL 254
                 E+GK +    H +H  E +   +  A+ R+ + G ++ +Q+ L+K INDDP++ 
Sbjct: 251 LFEEVCESGKNLAFQAHFSHTRELAPTMLHDAVKRIRDTGAVIRTQAPLIKSINDDPQVW 310

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           +++ R    + + PYY+          +F + +     I      ++SGLC+      + 
Sbjct: 311 SDMWRKHHTMGMVPYYMFVERDTGPQEYFAVPLARAYDIFQEAYSQVSGLCRTVRGPSMS 370

Query: 315 GGYGKVKID 323
              GKV +D
Sbjct: 371 ADPGKVAVD 379


>gi|134046377|ref|YP_001097862.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C5]
 gi|132664002|gb|ABO35648.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C5]
          Length = 594

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 161/355 (45%), Gaps = 37/355 (10%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKE-ISNHYSIALTPVIANLINPHNPND---PIARQFIPQ 63
           L + QDL +   + + +I  IK+   N     +TP   +L++  +  +    I  Q IP 
Sbjct: 204 LETLQDLLD---LSESEISSIKKACENSIPFGITPYYVSLMDETSSREFDHAIRAQVIPP 260

Query: 64  KEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
              ++   E R      D +G+N+ SP+  +  RYP   ++K    C   C +C R   +
Sbjct: 261 TRYVDKTLESRTRGNSLDFMGENDTSPVDLVTRRYPMIAIMKPYETCAQICVYCQRNWQI 320

Query: 119 GS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
                K  +   +    A+ + +    I EV+ TGGDP +L  + L  +L     IKHV+
Sbjct: 321 KDVLSKDALAPKETVLNAIEWFKNHESIKEVLITGGDPALLDDEYLDWILSEFSQIKHVE 380

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLAN 232
            +R  +R+P+V PQRI    ++ L +  +P    + ++ H  H YE +++   A+S+L N
Sbjct: 381 RIRIGTRIPVVLPQRITKNFVEILAKYNEPGIREIAVSTHVEHVYEITKDVQEAVSKLKN 440

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVEL-RIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
            G+ + +Q V    + +      + +R  ++L  I PYYL +      T  +R+      
Sbjct: 441 KGMSVYNQQVF--TVENSRRFETSALRKVLKLIGIDPYYLFNTKGKDETIDYRVP----- 493

Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG--NGSYCITDHHNIV 344
            I  +L+E+            L  GY +      N+ K+G  N +YC  DH  I+
Sbjct: 494 -IARALQERSEE-------ARLLPGYCRTDCTVFNVPKLGKNNLNYC-QDHDLIM 539


>gi|300786612|ref|YP_003766903.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32]
 gi|299796126|gb|ADJ46501.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32]
          Length = 456

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 135/282 (47%), Gaps = 21/282 (7%)

Query: 54  DPIARQFIPQKEELNIL----PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           DPI R  +P + + +      P    D + +     ++G+ HRYP ++L +++  CP YC
Sbjct: 110 DPIRRYMLPVRSDRDATWPSHPHSERDSLHEAEMWVVEGLTHRYPTKVLAEMISTCPQYC 169

Query: 110 RFCFRREMVGSQKGTVLSSKDT-------EAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C R ++VG+   TV   K T       +A +AY+++   + +V+ +GGD   +   +L
Sbjct: 170 GHCTRMDLVGNSTETVEKHKLTLKPVDRQDAMIAYLKKTPGVRDVVVSGGDVANVPWPQL 229

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAG-----KPVYIAIHA--N 214
           +  L  L  I  V+ +R  ++     PQ  + P++++ L+        + V +AIH   N
Sbjct: 230 ESFLMRLMDIDTVRDIRLATKALAALPQHWLQPKVVEGLERVAVTAQRRGVNLAIHTHVN 289

Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272
           H    +     A     N G+  + +Q VL++G+N  P  L +L      E  I PYY +
Sbjct: 290 HAQSVTPLVAEAAQTALNVGVRDVRNQGVLMRGVNATPAALLDLCFALQGEANILPYYFY 349

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
             D+     H+R+++ E Q++  S+   + G   P  + D+P
Sbjct: 350 MCDMIPNAEHWRVSVWEAQELQHSIMGYLPGYATPRIVCDVP 391


>gi|302539601|ref|ZP_07291943.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302457219|gb|EFL20312.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
           [Streptomyces himastatinicus ATCC 53653]
          Length = 362

 Score =  109 bits (272), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/233 (32%), Positives = 115/233 (49%), Gaps = 12/233 (5%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ---EKS 142
           L+G+   Y   +L++   +C  +CR+C R    G    T LS +D E    Y     E  
Sbjct: 66  LRGVEKLYRRTLLVEPTTICAAHCRWCIR----GQYDTTTLSREDLEFIARYCGTAPENQ 121

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
            + EV+ TGGDPLIL   R++ +L  L  +   V+I+R  +RVP+ DP+RI+  +   L+
Sbjct: 122 DVREVLVTGGDPLILI-DRIEWLLDALEEHAPQVEIVRIATRVPLQDPRRIDARMKHALR 180

Query: 202 EAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                 V +A H NH  E   E   A + L  AG  +  Q+VLL+G+ND+ + L  L   
Sbjct: 181 RRSTFRVEVATHINHKGELFPEVREAYAALQEAGARIYDQTVLLRGLNDNLDTLVELFDE 240

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK--ISGLCQPFYIL 311
              + I+ +YL H     G  H R ++ EG ++   L      SG  +P + L
Sbjct: 241 LRHMDIEAHYLFHCVPIRGMDHHRTSVAEGLELHRRLGASGLTSGRTRPHFTL 293


>gi|110834678|ref|YP_693537.1| L-lysine 2,3-aminomutase [Alcanivorax borkumensis SK2]
 gi|110647789|emb|CAL17265.1| L-lysine 2,3-aminomutase, putative [Alcanivorax borkumensis SK2]
          Length = 462

 Score =  108 bits (271), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 143/325 (44%), Gaps = 44/325 (13%)

Query: 42  VIANLINPHN-PNDPIARQFIPQKEEL---------------------NILPEERED--- 76
           VI  LIN  N PNDPI +   PQK  L                       + E RE    
Sbjct: 75  VINELINWDNVPNDPIYQLTFPQKGMLAPEHFDKVADAMRGGDKTAIKTAIAEVREALNP 134

Query: 77  -PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVL 126
            P G   H+        ++GI H+Y + +L       VC  YC FCFR           +
Sbjct: 135 HPAGQMEHNIPEVDGEKIEGIQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKI 194

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           ++K+      YIQ   +I +V+ TGGDPL++  K L+  ++ L  ++ ++ +R  S+   
Sbjct: 195 ATKEAGQLKKYIQAHPEISDVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALT 254

Query: 187 VDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIIL 237
             PQR+       +L+   +E   +GK + +  H NH  E     A  A+ R+   G ++
Sbjct: 255 FWPQRVVSDADAKDLLHLFEEVIASGKHLALMAHYNHWQELQTNIAREAVKRVRATGAVI 314

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q  LL  IND+ +  A L +T VEL I PYY+          +F + + +   I    
Sbjct: 315 RAQGPLLAHINDNADDWARLWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWNIYRDA 374

Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
            +++SG+ +      +    GKV+I
Sbjct: 375 MKQVSGIARTARGPSMSSHPGKVEI 399


>gi|194333979|ref|YP_002015839.1| radical SAM domain-containing protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194311797|gb|ACF46192.1| radical SAM domain protein [Prosthecochloris aestuarii DSM 271]
          Length = 433

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 48/350 (13%)

Query: 3   LRHKTLTSAQ--DLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIAR 58
           L++++ T+A   +L     +  EQI  IK ++  Y   +   +A NLI+    P+DP+ R
Sbjct: 2   LKYRSYTAANIHELPQYRALSDEQIHTIKTVATVYPFRINNHVAENLIDWSAVPDDPVFR 61

Query: 59  QFIPQK-----EELN---------------------ILPEEREDPIGDNN-HSP------ 85
              PQ      +E N                     I+  +  +P G    ++P      
Sbjct: 62  LSFPQAGMLQDKEFNDLSGLIRSGKDKTIIQRTARQIMLRQNPNPAGQMELNTPQLDGIA 121

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G+ H+Y + +L       VC  YC +CFR            ++ D    ++Y++E  +
Sbjct: 122 LHGMQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLDNLKFANHDVSRLISYLKEHPE 181

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-------- 195
           + ++IFTGGDP+++S + L+K ++ L  I  ++ +R  ++     P R   +        
Sbjct: 182 VKDIIFTGGDPMVMSSQLLRKYIEPLLKIPAIRTIRIGTKSLSWWPYRFTTDTDADDILR 241

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           L + +  AGK + I  H +HP E     A+ AI+R+ + G ++ SQS +++ IND+ +  
Sbjct: 242 LFEKIVHAGKHLAIMAHISHPGEIENPAALDAITRIRSTGAVIRSQSPIVRYINDNAQTW 301

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
             + +  + L I PYY+          +F + + E   I  +   K+SGL
Sbjct: 302 EAMWQKQLHLGIIPYYMFLERDTGPKHYFDVPLHEALNIFNTAYRKMSGL 351


>gi|254427342|ref|ZP_05041049.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881]
 gi|196193511|gb|EDX88470.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881]
          Length = 463

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/325 (27%), Positives = 144/325 (44%), Gaps = 44/325 (13%)

Query: 42  VIANLINPHN-PNDPIARQFIPQKEELN---------------------ILPEERED--- 76
           VI  LIN  N PNDPI +   PQK  L                       + E RE    
Sbjct: 75  VINELINWDNVPNDPIYQLTFPQKGMLAPEHFDKVAEAMRGGDKAEIKATIAEVREALNP 134

Query: 77  -PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVL 126
            P G   H+        + G+ H+Y + +L       VC  YC FCFR           +
Sbjct: 135 HPAGQMEHNMPEVDGEKIDGVQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKI 194

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           ++K+      YIQ   +I +V+ TGGDPL++  K L+  ++ L  ++ ++ +R  S+   
Sbjct: 195 ATKEAGQLKKYIQAHPEISDVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALT 254

Query: 187 VDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIIL 237
             PQR+       +L+   +E   +GK + +  H NH  E   + A  A+ R+   G ++
Sbjct: 255 FWPQRVVSDADAQDLLDLFEEVIASGKHLALMAHYNHWQELETDIAREAVKRVRATGAVI 314

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q  LL  IND+ +  A L +T VEL I PYY+          +F + + +  +I    
Sbjct: 315 RAQGPLLAHINDNADDWARLWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWEIYRDA 374

Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
            +++SG+ +      +    GKV+I
Sbjct: 375 MKQVSGIARTARGPSMSSHPGKVEI 399


>gi|134045650|ref|YP_001097136.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
 gi|150403695|ref|YP_001330989.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C7]
 gi|132663275|gb|ABO34921.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
 gi|150034725|gb|ABR66838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C7]
          Length = 594

 Score =  108 bits (269), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 22/276 (7%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEA 133
           D +G+ + SP+  +  RYP   ++K    C   C +C R   +     K  +   +  E 
Sbjct: 278 DFMGETDTSPVDLVTRRYPMIAIMKPYETCAQICVYCQRNWQIKDVFSKNALAKKESVEN 337

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
           A+ + +    I EV+ TGGDP ILS + L  +L     IKH++ +R  +R P+V PQRI 
Sbjct: 338 AIEWFRNNESIKEVLLTGGDPGILSEEYLAYLLSEFSEIKHLERIRIGTRTPVVLPQRIT 397

Query: 194 PELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
            E  + L    +P    V ++ H  H YE +++   A+S+L N GI + +Q V    + +
Sbjct: 398 DEFTEVLGHYNEPGIREVAVSTHIEHVYEVTKDLKDAVSKLKNNGIYVYNQQVFT--VEN 455

Query: 250 DPEILANLMRTFVEL-RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
                 + +R  ++L  I+PYYL +      T ++R+ I    + +   KE+        
Sbjct: 456 SRRFETSALRKALKLVGIEPYYLFNTKGKEETVNYRVPI---ARALQERKEEAR------ 506

Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
               L  GY +      N+ K+G  +      H+++
Sbjct: 507 ----LLPGYCRTDSTVFNVPKLGKNNLNFYQDHDLI 538


>gi|312602176|ref|YP_004022021.1| lysine2,3-aminomutase [Burkholderia rhizoxinica HKI 454]
 gi|312169490|emb|CBW76502.1| LYSINE 2,3-AMINOMUTASE (EC 5.4.3.2) [Burkholderia rhizoxinica HKI
           454]
          Length = 459

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 124/260 (47%), Gaps = 15/260 (5%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
           PI D     + G+ H+Y + +L        C  YC FCFR       +G    +K +   
Sbjct: 121 PILDGKR--MHGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMEGLKFDAKASNEL 178

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI 192
           +AY++  +++ +V+ TGGDPLI++ + L   ++ L    + H+Q +R  ++     PQR 
Sbjct: 179 VAYLRRHTEVTDVLITGGDPLIMNTRSLADYIEPLLSPELAHIQNIRIGTKSVAYWPQRF 238

Query: 193 NPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVL 243
             +        L + +  AGK + +  H NHP E   + A  A+ R+ ++G  L  QS L
Sbjct: 239 VTDKDADDLLWLFEKVVNAGKNLAVMGHYNHPVELRPDIAQKAVKRIVSSGATLRMQSPL 298

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           ++ INDD +  A L  T V L   PYY+          +F+L + +  +I  +  + +SG
Sbjct: 299 IRHINDDAKAWAELWTTGVRLGAIPYYMFIERDTGPRQYFQLPLIKSYEIFQAAYQSVSG 358

Query: 304 LCQPFYILDLPGGYGKVKID 323
           L +      +    GKV +D
Sbjct: 359 LSRTVRGPSMSAFPGKVVVD 378


>gi|262045422|ref|ZP_06018445.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259037251|gb|EEW38499.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 174

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 88/162 (54%)

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
           L  ++  L  I HV+ LR HSR+PIV P RI   L    + +   V +  H NH  E   
Sbjct: 7   LDWLMTQLEAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDG 66

Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
           E  AA++ L  AG+ LL+QSVLL+G+ND+ + LA+L     +  + PYYLH  D   G +
Sbjct: 67  EFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAA 126

Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           HF ++ +E ++I+  L   ISG   P    ++ G   K  +D
Sbjct: 127 HFMVSDDEAREIMRELLTLISGYMVPKMAREIGGEPSKTPLD 168


>gi|237654137|ref|YP_002890451.1| hypothetical protein Tmz1t_3480 [Thauera sp. MZ1T]
 gi|237625384|gb|ACR02074.1| conserved hypothetical protein [Thauera sp. MZ1T]
          Length = 484

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 22/307 (7%)

Query: 32  SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED---PIGDNNHSPLKG 88
           S HY       IA LI      D +       +  LN  P ++     P+ D +   + G
Sbjct: 116 SEHYE-----RIARLIEGDADKDALEAAIAEVRHALNPHPADQMQMNMPL-DEHGKRIDG 169

Query: 89  IVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           + H+Y + +L        C  YC FCFR       K   ++S +      Y++  +++ +
Sbjct: 170 LQHKYRETVLFFPSQGQTCHAYCSFCFRWAQFVGDKELRIASSEARVLHDYLRTHTEVTD 229

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQR-INPE-------L 196
           ++ TGGDP+++  + L++ L+ L      H+Q +R  S+     P R +  E       L
Sbjct: 230 LLVTGGDPMVMKTRHLREYLEPLLRPEFDHIQTIRIGSKALTFWPHRFLGAEDADDLMRL 289

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEILA 255
           ++ L EAGK V +  H NH  E   +A  AAI R+   G ++ +Q  L+  INDDP   A
Sbjct: 290 LRQLVEAGKHVALMAHYNHWKELETDAAHAAIRRIRATGAVIRAQGPLIAHINDDPAAWA 349

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            L +T V L + PYY+          +F + +    +I     +++SGL +      +  
Sbjct: 350 RLWKTEVRLGLVPYYMFVERDTGARHYFEVPLARAWEIYQQAIQQVSGLARTARGPSMSA 409

Query: 316 GYGKVKI 322
             GKV+I
Sbjct: 410 SPGKVEI 416


>gi|149375732|ref|ZP_01893500.1| Radical SAM domain protein [Marinobacter algicola DG893]
 gi|149359857|gb|EDM48313.1| Radical SAM domain protein [Marinobacter algicola DG893]
          Length = 454

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 144/328 (43%), Gaps = 47/328 (14%)

Query: 42  VIANLINPHN-PNDPIARQFIPQ---------------------KEELNILPEERED--- 76
           VI  LI+ +  PNDP+ +   PQ                     K+E+  + +E  D   
Sbjct: 61  VINELIDWNKVPNDPLYQLVFPQKGMLKDEHYERMAKMHREGAEKKEIQAVAKEIRDELN 120

Query: 77  --PIG-------DNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
             P G       + N   L G+ H+Y + +L        C  YC FCFR       K   
Sbjct: 121 PHPAGQMEMNMPELNGEVLDGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLK 180

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSR 183
           ++S + E    Y+QE +++ +++ TGGDP+++  K L + L+ L      H+Q +R  ++
Sbjct: 181 MASTEAEKLHGYLQEHTEVSDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTK 240

Query: 184 VPIVDPQRINP--------ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234
                P R           +L   L +AGK V I  H NH  E + + A  AI RL   G
Sbjct: 241 ALTFWPYRFVTDKDADELIDLFARLVDAGKHVAIMAHYNHWQEITTDIAEEAIRRLRATG 300

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
             + +Q  L+K +ND+ +  A L    V+L I PYY+         ++F + + E   I 
Sbjct: 301 AEIRAQGPLIKHVNDNADDWAKLWDKEVQLGIIPYYMFVERDTGAKNYFEVPLVEAFNIY 360

Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKI 322
               +++SGL +      +  G GKV++
Sbjct: 361 REAIKQVSGLARTARGPSMSAGPGKVEV 388


>gi|238059077|ref|ZP_04603786.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149]
 gi|237880888|gb|EEP69716.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149]
          Length = 469

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 148/308 (48%), Gaps = 29/308 (9%)

Query: 36  SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84
           S+ + P + N + PH P        DPI R  IP    ++ +    P    D + +++  
Sbjct: 97  SMLVPPQMINTMVPHAPPTTEALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 156

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAY 137
             +G+ HRYP ++L +LL  CP YC  C R ++VG+    V   K T       +A +AY
Sbjct: 157 VAEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHIAY 216

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196
           ++    + +V+ +GGD   +  + L+  L  L  I+ ++ +R  ++  +  PQ  + P++
Sbjct: 217 LKAHPGVRDVVVSGGDVANVPWRNLESYLMRLLEIETIRDVRLATKALMGLPQHWLQPDV 276

Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGIN 248
           ++ L+      A + V +AIH   NH    +     A     + G+  + +Q VL++G+N
Sbjct: 277 VEGLERVARTAARRGVNLAIHTHVNHRQSITPLVAKAAQTALDVGVRDVRNQGVLMRGVN 336

Query: 249 -DDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
              P++L  L R F  + +I PYY +  D+     H+R+ +   Q++   +   + G   
Sbjct: 337 ATAPDLLGPLFRPFRRKKKILPYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYAT 396

Query: 307 PFYILDLP 314
           P  + D+P
Sbjct: 397 PRIVCDVP 404


>gi|119716886|ref|YP_923851.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614]
 gi|119537547|gb|ABL82164.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614]
          Length = 468

 Score =  106 bits (265), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 142/312 (45%), Gaps = 33/312 (10%)

Query: 36  SIALTPVIANLINPH----NPN--------DPIARQFIP----QKEELNILPEEREDPIG 79
           S+ + P + N + PH     P         DP+    IP    ++ +    P    D + 
Sbjct: 92  SMLVPPQMMNTMVPHEVPAGPGSLTEAFYADPVRHYMIPVFSDRRTDWPSHPHATRDSLH 151

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA------ 133
           +++    +G+ HRYP ++L +LL  CP YC  C R ++VG+   T+   K          
Sbjct: 152 EHDMWVAEGLTHRYPTKVLAELLPTCPQYCGHCTRMDLVGNSTPTIDKLKFVAKPNDRLG 211

Query: 134 -ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
             L Y++   Q+ +V+ +GGD   L   RL+  L  L  I++++ +R  ++  +  PQ  
Sbjct: 212 DMLDYLRRTPQVRDVVVSGGDVANLPWPRLEDFLTRLLEIENIRDIRLATKALVGLPQHW 271

Query: 193 NPELIQC--------LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVL 243
             E ++          +  G  + I  HANH    +     A + +  AG+  + +Q VL
Sbjct: 272 LQEDVRAGMARVAGTARSRGVSLAIHTHANHANSITPLVADATAAMFEAGVRDVRNQGVL 331

Query: 244 LKGINDDPEILANL-MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           L G+N  P+ L +L  R     +I PYY +  D+   + H+R+++ + Q++   +   + 
Sbjct: 332 LNGVNAGPDALLDLCFRLLDGAQIMPYYFYMCDMIPFSEHWRVSVADAQRLQHHIMGYLP 391

Query: 303 GLCQPFYILDLP 314
           G   P  + D+P
Sbjct: 392 GFATPRIVCDVP 403


>gi|115380256|ref|ZP_01467274.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
 gi|310822788|ref|YP_003955146.1| hypothetical protein STAUR_5549 [Stigmatella aurantiaca DW4/3-1]
 gi|115362735|gb|EAU61952.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
 gi|309395860|gb|ADO73319.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 456

 Score =  106 bits (264), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 145/301 (48%), Gaps = 22/301 (7%)

Query: 36  SIALTPVIANLINPHN-PNDPIARQFIPQ-KEELNILP---EEREDPIGDNNHSPLKGIV 90
           S+ L P + N +N  +   DP+ R  +P   + L   P       D + +     ++G+ 
Sbjct: 90  SVLLPPQMLNTMNLEDLWGDPVRRYMLPAFADRLTTWPNHPRASRDSLHEAEMWVVEGLT 149

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-------KGTVLSSKDTEAALAYIQEKSQ 143
           HRYP ++L ++L  CP YC  C R ++VG+        + ++   +  E  L Y++    
Sbjct: 150 HRYPTKVLAEMLPTCPQYCGHCTRMDLVGNDVPQVEKHRFSIGPKERYEKMLDYLRRTPS 209

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCLK- 201
           + +V+ +GGD   L  ++L+  + +L  I +++ +R  S+  +  PQ  +   ++Q L  
Sbjct: 210 VRDVVVSGGDIANLPIQQLEPFVSSLMDIPNIRDIRLASKGLMGIPQHFLQDSVLQGLDR 269

Query: 202 ------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEIL 254
                 E G  + +  H NH  + +     A+ +L + G   + +Q VLL+G+ND    L
Sbjct: 270 LAKKAVERGVDLALHTHVNHARQLTPLVGKAVRKLLDMGFRDVRNQGVLLRGVNDSAPAL 329

Query: 255 ANLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            +L  T ++  +I PYY +  D+   + H+RL++ + Q +   +   + G   P  + D+
Sbjct: 330 LDLCFTLLDHAKILPYYFYMCDMIPNSEHWRLSVAQAQTLQHDIMGYMPGFATPRIVCDV 389

Query: 314 P 314
           P
Sbjct: 390 P 390


>gi|182412197|ref|YP_001817263.1| radical SAM domain-containing protein [Opitutus terrae PB90-1]
 gi|177839411|gb|ACB73663.1| Radical SAM domain protein [Opitutus terrae PB90-1]
          Length = 468

 Score =  105 bits (262), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 13/255 (5%)

Query: 82  NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +  PL G+ H+Y D +L        C  YC +CFR            +S+  E+ +AY++
Sbjct: 126 DGQPLSGMQHKYRDTVLFFPSPGQTCHTYCTYCFRWPQFVGLDELKFASRQAESLVAYLK 185

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE-- 195
           E  ++  V+FTGGDPL++    L++ ++ L    ++H+  +R  ++ P   P R   E  
Sbjct: 186 EHPEVSNVLFTGGDPLVMRTAVLRRYIEPLLSPELEHISAIRIGTKSPAWWPYRFVNEPD 245

Query: 196 ------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGIN 248
                 L   ++ AG+ + I  H + P E     A AA+ R+ + G I+  Q+ L++ +N
Sbjct: 246 SDDLLRLFDQVRAAGRHMAIMAHYSRPRELQTPVAQAALRRIKSTGAIVRCQAPLIRHVN 305

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           DD +  A+L R  V L   PYY+          +F + +    +I      ++SGL +  
Sbjct: 306 DDADTWADLWRLQVRLGAVPYYMFVERDTGPKGYFEVPLARCYEIFQKAYRRVSGLERTV 365

Query: 309 YILDLPGGYGKVKID 323
               +    GKV ID
Sbjct: 366 RGPSMSATPGKVIID 380


>gi|148252209|ref|YP_001236794.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
 gi|146404382|gb|ABQ32888.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
          Length = 485

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 15/267 (5%)

Query: 84  SPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           + L+G+ H+Y +  L   K    C  YC FCFR             ++D E   AY++ +
Sbjct: 155 ASLEGVQHKYDETALFFAKQGQTCHSYCSFCFRWPQFVDSAVDRFEARDGERLYAYLRTR 214

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQR--INPE-- 195
             I +V+ TGGDP ++S +RL   L+ L      HV  +R  ++     PQR  +  E  
Sbjct: 215 RDITDVLLTGGDPFVMSSRRLADYLEPLLAPEFSHVTNIRIGTKALSYWPQRFYVGAEAE 274

Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
               L+  + ++GK V +  H NH  E + E +  A+  L  +G ++ +QS +L+ +NDD
Sbjct: 275 ELNRLLVRVADSGKQVAVMAHVNHWRELTPEPVHRAVEALRRSGAVIRTQSPVLRHVNDD 334

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
             +     R  V + + PYY+          +FR++++    I  +    +SG+C+    
Sbjct: 335 VAVWRRNWRDQVAMGMIPYYMFVERDTGANHYFRISLDRALAIYQAAAAAVSGICRTARG 394

Query: 311 LDLPGGYGKVKIDTHNIKKVGNGSYCI 337
             +  G GK+ +       +GN  Y +
Sbjct: 395 PVMSAGPGKIHVLGR--LAIGNDDYFV 419


>gi|77918358|ref|YP_356173.1| hypothetical protein Pcar_0744 [Pelobacter carbinolicus DSM 2380]
 gi|77544441|gb|ABA88003.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
          Length = 442

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 15/260 (5%)

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G+ H+Y + +L   +L   C  YC FCFR      ++   +    T     Y++  S+
Sbjct: 121 LPGLQHKYRETVLFFPRLGQTCHSYCSFCFRWPQFVCERDMRIMGPRTPGLFDYLRRHSE 180

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------ 195
           + +++ TGGDPL++    L + L+ L      H+Q +R  ++     P R   +      
Sbjct: 181 VTDLLVTGGDPLVMKAASLAEFLEPLLSPEFAHLQTIRIGTKSLSFWPYRFLTDRDADDL 240

Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
             L + L + GK + +  H NH  E  +E A  AI R+   G  + +QS ++  +NDDP+
Sbjct: 241 LRLFERLVKGGKHLAVMAHYNHWRELETEVARRAIERVKATGATIRTQSPVVAHVNDDPQ 300

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           +   L +T V L + PYYL          +F + +E   +I     +K+SGL +      
Sbjct: 301 VWVRLWQTQVRLGMVPYYLFVARDTGARHYFAIPLERCWQIYRQAIQKLSGLARTVRGPS 360

Query: 313 LPGGYGKVKIDTHNIKKVGN 332
           +  G GKV+I    + +VG 
Sbjct: 361 MSAGPGKVEI--QGVAEVGQ 378


>gi|227357432|ref|ZP_03841786.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906]
 gi|227162390|gb|EEI47390.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906]
          Length = 260

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 5/172 (2%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +PNDP+  Q +    E  + P    DP+ D   + + G++H+Y +R LL +   C V CR
Sbjct: 67  DPNDPLLLQVLTAHAEFTLTPGFSTDPL-DEQQNAVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           +CFRR       KG   +  + + A+ YI+   ++ E+IF+GGDPL+     L  ++  L
Sbjct: 126 YCFRRHFPYEDNKG---NKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQL 182

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
             I H++ LR HSR+P+V P RI   L Q L+++     + +H NH  E  +
Sbjct: 183 EAIPHIKRLRIHSRLPVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDD 234


>gi|197294893|ref|YP_002153434.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
 gi|195944372|emb|CAR56973.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
          Length = 466

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 13/254 (5%)

Query: 82  NHSPLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +  P  GI H+Y   +L    H   C  YC FCFR            +S +     AY++
Sbjct: 141 DGEPCPGIQHKYAQTVLYFPSHGQTCHAYCTFCFRWPQFVGDASLKFASSEAARLHAYLR 200

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI----- 192
              ++ +++ TGGDP+++S  RL++ L  L    ++HV  +R  ++     P R      
Sbjct: 201 AHGEVTDLLMTGGDPMVMSATRLREYLMPLLAPGLEHVGNIRIGTKALTYWPYRFVSDPD 260

Query: 193 NPELIQCLK---EAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGIN 248
            PEL+  L+   +AG+ V +  H NH  E S E A  A++ L   G+++ SQ  +L+ IN
Sbjct: 261 TPELLALLRTLIDAGRNVTVMAHLNHWRELSTEVAEQAVTNLRRIGVVIRSQGPVLRHIN 320

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           DD E+        V L I PYY+          +F L +     I  +    +SGL +  
Sbjct: 321 DDAEVWRRNWVGQVRLGIVPYYMFVERDTGPRGYFELPLARALDIYNTAIASVSGLARSA 380

Query: 309 YILDLPGGYGKVKI 322
               +  G GKV++
Sbjct: 381 RGPSMSAGPGKVEV 394


>gi|226946213|ref|YP_002801286.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ]
 gi|226721140|gb|ACO80311.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ]
          Length = 433

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 146/329 (44%), Gaps = 47/329 (14%)

Query: 42  VIANLINPHN-PNDPIARQFIPQKEELN----------ILPEERE--------------- 75
           ++  LI+  N P+DPI R   P K+ L           IL +  E               
Sbjct: 50  ILDELIDWGNIPDDPIFRLTFPHKDMLRESEFQELSNAILNQFNEAEIQSISNKIRFRMN 109

Query: 76  -DPIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
            +P G   H+       P+ G+ H+Y + +L        C  YC FCFR           
Sbjct: 110 PNPAGQMTHNVPRMNGVPINGLQHKYKETVLFFPSAGQTCHSYCTFCFRWPQFVGMSSLR 169

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSR 183
             ++ +E  + Y++E  ++ +V+ TGGDPL+++ + L + ++ L    ++H++ +R  ++
Sbjct: 170 FEARSSEPLVQYLKEHKEVTDVLITGGDPLVMNTRILYEFIRPLLIPELEHIKNIRIGTK 229

Query: 184 VPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234
                PQR   +        L + +   GK + +  H NHP E   + A  A+ R+   G
Sbjct: 230 SISYWPQRFVTDKDADDLLHLFEDIIATGKNLALMAHYNHPCEIKTKIAQIAVKRIVGTG 289

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
           + +  QS ++K IND+P+   +L  T V+L   PYY+        +++F + +    +I 
Sbjct: 290 VTVRMQSPIIKHINDNPQAWVDLWTTGVQLGAIPYYMFVERDTGPSNYFEIPLVSAWEIF 349

Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKID 323
               + +SGL +      +    GK+ +D
Sbjct: 350 QKAYQSVSGLARTVRGPSMSTFPGKIMVD 378


>gi|313680789|ref|YP_004058528.1| l-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977]
 gi|313153504|gb|ADR37355.1| L-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977]
          Length = 432

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 11/248 (4%)

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G+ H+Y + +L        C  YC +CFR       +     S   +  + Y++   +
Sbjct: 129 LDGLQHKYAETVLFFPAGGQTCHAYCTYCFRWAQFVGDRELKFESSQVDDLVRYLRAHPE 188

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK 201
           + +V+ TGGDP+++  + L + L+ L  ++ ++ +R  S+     P R   +P+  + L+
Sbjct: 189 VTDVLVTGGDPMVMKTRLLARYLEPLLEVETLRTIRIGSKSLAYWPMRFTTDPDAAEVLR 248

Query: 202 ------EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEIL 254
                  AGK +    H +HP E   E + AAI  L   G ++ +Q+ L++ +NDD ++ 
Sbjct: 249 LFERVAAAGKQLAFMAHFSHPRELETEQVQAAIQNLLATGAVVRTQAPLIRHVNDDADVW 308

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           A   R  V L + PYY+          +F + + E Q+I A    ++SGL +      + 
Sbjct: 309 AEKWRREVRLGLIPYYMFVERDTGPKRYFEVPLAEAQRIFADAYRQVSGLARTVRGPSMS 368

Query: 315 GGYGKVKI 322
              GKV++
Sbjct: 369 AFPGKVRV 376


>gi|296108845|ref|YP_003615794.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
           infernus ME]
 gi|295433659|gb|ADG12830.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
           infernus ME]
          Length = 589

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 11/279 (3%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEI-KEISNHYSIALTPVIANLIN---PHNPNDPIARQFI 61
           K L   +DL +   I +E +  + K I N+   A+TP   +L +   P+  + PI RQ I
Sbjct: 200 KGLEILRDLKDIVKISEEDLTLLEKAIENNIPYAITPYYLHLFDFDQPYKYDLPIRRQVI 259

Query: 62  PQKEELNILP--EERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           P +  +N++   E RE  D +G+ + +P + I  RY    ++K    CP  C +C R  M
Sbjct: 260 PPEHYINMMANAESREVFDYMGELDTTPEELITRRYVTIAIMKPYESCPQICVYCQRNWM 319

Query: 118 VGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
           +           D  E AL + +E   + E++ TGGDPL LS   ++K+++ ++   HV 
Sbjct: 320 IKDFGDKAFVGWDKVEKALKWFEEHESMIEILITGGDPLCLSDSSIKKIVERIKNFDHVI 379

Query: 177 ILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
            +RF +R  +  P RI   L+  L     K V ++ HA   YE + E   A+  L +  I
Sbjct: 380 GVRFGTRTLLTAPMRITESLLDVLSILKDKKVIVSTHAESSYEITPEVKRAVELLGSKNI 439

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
            + +Q V  + ++   E +A L     ++ I PYY  +P
Sbjct: 440 RVYNQHVYHRYVSRRFENVA-LRIALRKVGIIPYYTFYP 477


>gi|15668815|ref|NP_247618.1| hypothetical protein MJ_0634 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496087|sp|Q58051|Y634_METJA RecName: Full=Uncharacterized KamA family protein MJ0634
 gi|1591346|gb|AAB98629.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 620

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 11/256 (4%)

Query: 29  KEISNHYSIALTPVIANLINPHNP---NDPIARQFIPQKEELNILPEEREDP------IG 79
           K + N     LTP   +L +  NP   +  + RQ IP +  +  + E +ED       +G
Sbjct: 253 KAVKNGIPFGLTPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMG 312

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAYI 138
           +++ SP+  +  RY    ++K    CP  C +C R  MV           +  E AL + 
Sbjct: 313 EHDTSPIDLVTRRYVTIAIIKPYESCPQICVYCQRNWMVQDFDAKAFPGWEKVEKALDWF 372

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
            E   + E++ TGGDP  LS K ++K+L  +  + HV  +RF +R  +  P RI  EL +
Sbjct: 373 AEHDSMIEILITGGDPFSLSDKAIEKMLNRIAEMNHVVGVRFGTRTIVTAPMRITDELAE 432

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            L    K + I+ H    YE + E   A+ +L    I + +Q V  + ++   E +A L 
Sbjct: 433 LLGSFEKSLMISTHVESCYEITPEVAEAVKKLRTNNIYIYNQHVFHRYVSRRFENVA-LR 491

Query: 259 RTFVELRIKPYYLHHP 274
               ++ I PYY  +P
Sbjct: 492 IALKKVGIIPYYTFYP 507


>gi|1369901|dbj|BAA12848.1| yjeK [Buchnera aphidicola]
 gi|2827006|gb|AAC38098.1| 39-kDa hypothetical protein [Buchnera aphidicola]
          Length = 144

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 54/133 (40%), Positives = 77/133 (57%)

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P RI  +L Q    +   + I  H NHP E +E+   ++ +L  + +ILL+
Sbjct: 1   IHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDSLLKLKKSNVILLN 60

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLK IND+  ILA L     E  I PYYLH  D   GTSHF ++ ++ + I++ L +
Sbjct: 61  QSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVSNKKAKSIISDLMK 120

Query: 300 KISGLCQPFYILD 312
            ISG   P  + D
Sbjct: 121 MISGFLVPRLVFD 133


>gi|226327321|ref|ZP_03802839.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198]
 gi|225204539|gb|EEG86893.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198]
          Length = 174

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 88/162 (54%)

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
           L  ++  L  I H++ LR HSR+P+V P R+   L Q L+++     + +H NH  E  +
Sbjct: 7   LDWLITQLEAIPHLKRLRIHSRLPVVIPARVTDALCQRLQQSRLQNIMVLHTNHANEMDD 66

Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
               A S+L  A + LL+Q VLL+G+ND  E+LA+L R   +  + PYYLH  D   G +
Sbjct: 67  ALREACSKLKKANVTLLNQGVLLRGVNDSAEVLADLSRALFDAGVMPYYLHVLDKVQGAA 126

Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           HF +   E ++I+ +L   +SG   P    ++ G   K  +D
Sbjct: 127 HFMVPDSEAREIMKALMSLVSGYMVPKLTREIGGEPSKTLLD 168


>gi|91772254|ref|YP_564946.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
 gi|91711269|gb|ABE51196.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
          Length = 441

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 156/368 (42%), Gaps = 48/368 (13%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHN-PNDPIARQF 60
            R  TL++ +++       +EQ ++I   +  +   +   VI  LIN  N PNDP+ R  
Sbjct: 14  FRAYTLSNYKEIPQIQNFTQEQQEDIGIAARIFPFRVNNYVIDELINWDNVPNDPMFRLT 73

Query: 61  IPQKE--------------------------------ELNILPEEREDP-IGDNNHSPLK 87
            P K+                                 LN  P  + D  + + N   L+
Sbjct: 74  FPNKDMLLPPHYKEMKHLLHTAASEEEVQQAIHKIRLTLNPHPAGQLDKNVPELNGKVLE 133

Query: 88  GIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           G+ H+Y + +L        C  +C FCFR       K    +S++ E  ++Y+QE  ++ 
Sbjct: 134 GMQHKYNETVLFFPTQGQTCHTFCTFCFRWAQFTGMKDLKFASREIETLVSYLQEHPEVK 193

Query: 146 EVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE-------- 195
           +V+FTGGDP+ +S   L++ ++ +    I+ ++ +R  ++     PQR   +        
Sbjct: 194 DVLFTGGDPMTMSANLLKRYIEPILEADIRTIENIRIGTKSLSYWPQRFVSDKDSEDILS 253

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEIL 254
           L   + +  K + I  H NHP E + + +  AI  +   G  + +QS L+  INDDP I 
Sbjct: 254 LFSNVTDHNKHMAIMGHFNHPVELTTDTVKEAIKNIRATGAQIRTQSPLIAHINDDPVIW 313

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
             + R  V L   PYY+          +F   I +  +I     + +SGL +      + 
Sbjct: 314 EQMWREQVRLGCIPYYMFMVRNTGANHYFDTPISKAWEIFQEAYQNVSGLARTVRGPSMS 373

Query: 315 GGYGKVKI 322
              GK+ +
Sbjct: 374 TDPGKINV 381


>gi|226312788|ref|YP_002772682.1| hypothetical protein BBR47_32010 [Brevibacillus brevis NBRC 100599]
 gi|226095736|dbj|BAH44178.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 421

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 9/240 (3%)

Query: 74  REDPIGDNNH--SPLKGIVHRYPDRILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKD 130
           R DP G+ ++       + H+Y   +LL +   C   C+FC++  E+     G       
Sbjct: 83  RFDPYGNKSYRQDETAFLQHKYKKTLLLHIDDFCIANCQFCYKVNEIRHEDIGYTNIMDK 142

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDP 189
            E A+ Y++    I  V+FTGGDP        L K++ TL  +K ++++RF ++    DP
Sbjct: 143 AERAVQYLEAHPYIDNVLFTGGDPASFRKTSDLIKLISTLLSVKSIRLVRFATKALAYDP 202

Query: 190 QR-INPELI----QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
            R ++ EL+    Q  +  GK V +    NHP E S+ +I A   L + G+ +  Q  ++
Sbjct: 203 ARFLDGELLAFFDQVRQTPGKQVSVISQFNHPGEISDVSIQATQALLSVGVQIRGQPAII 262

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           +G+ND  E L +L R F++ RI  YYL       G   + + ++E  + VA  K  + GL
Sbjct: 263 RGVNDSVETLIDLQRKFLDNRIISYYLTVFMPVRGVEQYAIPLDEAFRNVAESKRNLGGL 322


>gi|149924160|ref|ZP_01912537.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1]
 gi|149814961|gb|EDM74521.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1]
          Length = 407

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 23/276 (8%)

Query: 77  PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           P G  +H+        L+G+ H+Y + +L   +    C  YC FCFR       +G    
Sbjct: 75  PAGQRSHNVPTVDGRRLEGVQHKYRETVLFFPQQGQTCHAYCTFCFRWAQFVGLEGMKFE 134

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVP 185
           S++      Y++    + +V+FTGGDP+++  + L++ ++ L +   +H+ + R  ++  
Sbjct: 135 SREMADLTTYLRNNPAVTDVLFTGGDPMVMKTRVLRRYIEPLLHPDFEHINV-RIGTKSV 193

Query: 186 IVDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGII 236
              PQR        EL+   +E   +G+ + +  H NHP E   E A  A++R+ + G  
Sbjct: 194 SYWPQRYVSDDDADELLALFEEVSASGRHLALMAHYNHPRELQTEVAQRAVARIRSTGAQ 253

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           +  QS L++ IND PE  A L RT V+L   PYY+         ++F + +    +I   
Sbjct: 254 IRIQSPLIRRINDAPETWAELWRTGVKLGCIPYYMFVERDTGPRNYFEVPLARAWEIFGD 313

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
              ++SGL +      +    GKV +D   + KV  
Sbjct: 314 AYRQVSGLARTVRGPSMSTMPGKVLVD--GVAKVAG 347


>gi|289192520|ref|YP_003458461.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp.
           FS406-22]
 gi|288938970|gb|ADC69725.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp.
           FS406-22]
          Length = 620

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 11/256 (4%)

Query: 29  KEISNHYSIALTPVIANLINPHNP---NDPIARQFIPQKEELNILPEEREDP------IG 79
           K + N     +TP   +L +  NP   +  + RQ IP +  +  + E +ED       +G
Sbjct: 253 KAVKNGIPFGITPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMG 312

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAYI 138
           +++ SP+  +  RY    ++K    CP  C +C R  MV           +  E AL + 
Sbjct: 313 EHDTSPIDLVTRRYVTIAIIKPYESCPQICVYCQRNWMVQDFSEKAFPGWEKVEKALDWF 372

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
            E   + E++ TGGDP  LS K ++K+L  +  + HV  +RF +R  +  P RI  EL +
Sbjct: 373 AEHDSMIEILITGGDPFSLSDKAIEKMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAE 432

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            L    K V I+ H  + YE + E   A+ +L    I + +Q V  + ++   E +A L 
Sbjct: 433 LLGSFEKSVMISTHVENCYEITPEVKEAVKKLRTNNIYVYNQHVFHRYVSRRFENVA-LR 491

Query: 259 RTFVELRIKPYYLHHP 274
               ++ I PYY  +P
Sbjct: 492 IALKKVGIIPYYTFYP 507


>gi|317124916|ref|YP_004099028.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043]
 gi|315589004|gb|ADU48301.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043]
          Length = 483

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 21/282 (7%)

Query: 54  DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           DPI R  +P    ++ +    P    D + +++    +G+ HRYP ++L +LL  CP YC
Sbjct: 111 DPIRRYMLPVFSDRRTDWPSHPFSSRDSLHEHDMWVAEGLTHRYPTKVLAELLPTCPQYC 170

Query: 110 RFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C R ++VG+    V   K         +A LAY++    + +V+ +GGD   +  K L
Sbjct: 171 GHCTRMDLVGNSTPQVNKLKFDLKPVDRYDAMLAYLRNTPSVRDVVVSGGDVANMPWKNL 230

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--------QCLKEAGKPVYIAIHAN 214
           +  L  L  I +++ +R  ++  +  PQ    + +           +  G  + I  H N
Sbjct: 231 ESFLDRLLEIDNIRDIRLATKALMGLPQHWFADDVVEGVARVAATARARGVSLAIHTHVN 290

Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLH 272
           +    +     A   +  AG+  + +Q VL++GIND  E L +L     +   I PYY +
Sbjct: 291 NAQSVTPAVARASRAMLEAGVRDVRNQGVLMRGINDSTEQLLDLCFALADGASITPYYFY 350

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
             D+     H+RL++ E Q++  S+   + G   P  + D+P
Sbjct: 351 MCDMIPFAEHWRLSLAEAQRLQHSIMGYLPGFATPRIVCDVP 392


>gi|6729659|emb|CAB67710.1| hypothetical protein [Streptomyces rochei]
          Length = 403

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 132/292 (45%), Gaps = 22/292 (7%)

Query: 53  NDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
           +DP+ R  +P    +  +    P    D + + +   ++G+ HRYP ++L +LL  CP Y
Sbjct: 56  DDPVRRYMMPVMSDRHPQWPSHPMASRDSLHEQDMWVVEGLTHRYPTKVLAELLSTCPQY 115

Query: 109 CRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
           C  C R ++VG+    V  S+         +  LA+++    I +V+ +GGD   +   R
Sbjct: 116 CGHCTRMDLVGNSTPQVTKSRLQLKPVDRADRILAHLRVSPGIRDVVVSGGDLANMPWPR 175

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGKPVYIAIHA 213
           L++ L  L  I  ++ +R  S+  I  PQ  N          + +  +  G  + +  HA
Sbjct: 176 LERFLDDLLEIDSIRDIRLASKALIGLPQHWNSGPLLEGVARIARKARSRGVRIALHTHA 235

Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYL 271
           N   + +     A   L +AG+  + +Q VL++G+ND    L +L     +   I PYY 
Sbjct: 236 NAAQQVTPAVARAAWALLDAGLHDVRNQGVLMRGVNDSAHDLLDLCFALTDHAGITPYYF 295

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +  D+     H+R+ +   Q I   +   + G   P  + D+P   GK  +D
Sbjct: 296 YMCDMIPNAEHWRVPLHRAQLIQRQIMGYLPGFATPRIVCDVPMA-GKRWVD 346


>gi|261402967|ref|YP_003247191.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
           vulcanius M7]
 gi|261369960|gb|ACX72709.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
           vulcanius M7]
          Length = 621

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 11/256 (4%)

Query: 29  KEISNHYSIALTPVIANLINPHNP---NDPIARQFIPQKEELNILPEEREDP------IG 79
           K + N     LTP   +L +  NP   +  + RQ IP +  +  + E +ED       +G
Sbjct: 254 KAVKNGIPFGLTPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEHKEDRDTAFDFMG 313

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYI 138
           +++ SP+  I  RY    ++K    CP  C +C R  MV           +  E AL + 
Sbjct: 314 EHDTSPIDLITRRYVTIAIVKPYESCPQICVYCQRNWMVQDFDAKAFKGWEKIEKALDWF 373

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
            E   + E++ TGGDP  LS K ++++L  +  + HV  +RF +R  +  P RI  EL +
Sbjct: 374 AEHDSMIEILITGGDPFSLSDKAIERMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAE 433

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            L    K + I+ H    YE + E   A+ +L    I + +Q V  + ++   E +A L 
Sbjct: 434 LLGSFEKRIMISTHVESCYEITPEVKDAVEKLNKNKIYVYNQHVFHRYVSRRFENVA-LR 492

Query: 259 RTFVELRIKPYYLHHP 274
               ++ I PYY  +P
Sbjct: 493 IALKKVGIIPYYTFYP 508


>gi|152990665|ref|YP_001356387.1| hypothetical protein NIS_0919 [Nitratiruptor sp. SB155-2]
 gi|151422526|dbj|BAF70030.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 425

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 121/269 (44%), Gaps = 13/269 (4%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGT 124
           +N  P +++  +   N   L G  H+Y + IL   K    C  YC FCFR          
Sbjct: 101 MNPHPADQKSNVPTINDKELTGSQHKYKETILFFPKQGQTCHAYCSFCFRWPQFTGMNEL 160

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHS 182
             + K+ +  + YI+    I ++IFTGGDPLI+S K L+  ++ +    I H+Q +RF +
Sbjct: 161 KFAMKEVDLLIEYIKAHPTITDLIFTGGDPLIMSTKLLRSYIEPILKADIPHLQNIRFGT 220

Query: 183 RVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANA 233
           +     P R   +        L + + E G  +    H NH  E  ++E   A+ R+   
Sbjct: 221 KTLGFWPYRFLTDSDADDLLKLFEEIVEHGYHLAFMAHFNHYRELQTDEVEKAVKRIQQT 280

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           G I+ +Q+ +L+ IND  E+   + R  V + + PYY+          +F + + E  KI
Sbjct: 281 GAIIRTQAPILRHINDSSEVWEKMWRKQVHMGMVPYYMFIARDTGAQHYFGVPLVEAWKI 340

Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKI 322
                  +SGL +      +    GK+ +
Sbjct: 341 FKDAISNVSGLARTVRGPSMSAAPGKIAV 369


>gi|251799361|ref|YP_003014092.1| hypothetical protein Pjdr2_5396 [Paenibacillus sp. JDR-2]
 gi|247546987|gb|ACT04006.1| conserved hypothetical protein [Paenibacillus sp. JDR-2]
          Length = 336

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 131/248 (52%), Gaps = 26/248 (10%)

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q   +L        +AYI E ++I +V+ TG D L+L   +L  +++ LR I+H+  +R 
Sbjct: 75  QSMVLLPVSQAAEGIAYIAEHNEIHKVVLTG-DSLMLGIAKLTSIIEQLRDIEHIGTIRL 133

Query: 181 HSRVPIVDPQRINPE--LIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGI 235
            SR+P+ +P RI  +  L++ L +   P   +Y+    NHP E + EA  A + L  AG+
Sbjct: 134 DSRMPVHNPMRIYEDHALLKMLSQFSSPEKRIYLMTTINHPRELTAEAKKAFNALHQAGV 193

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY--LHHPDLAAGTSHFRLT-----IE 288
           ++L+Q+ ++KG+N+DP +L  L+    +  + PY   ++ P+ +   S   L      ++
Sbjct: 194 VVLNQTPIVKGVNNDPLLLGKLIDQLSQAGVSPYSFIINRPNSSYPESSLSLQTQFSIVQ 253

Query: 289 EGQKIVASLKEKISGLCQPFY----ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
           + +++ A L ++I  L    Y    +LD+ GG   VK   H+ ++ G G +       I+
Sbjct: 254 QAKELTAELGKRIRLLMAHDYGKVELLDIEGGKAYVKY--HHYQEEGKGRF-------IM 304

Query: 345 HDYPPKSS 352
            D PP++S
Sbjct: 305 LDCPPEAS 312


>gi|315229952|ref|YP_004070388.1| lysine 2,3-aminomutase [Thermococcus barophilus MP]
 gi|315182980|gb|ADT83165.1| lysine 2,3-aminomutase [Thermococcus barophilus MP]
          Length = 647

 Score =  102 bits (255), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 21/290 (7%)

Query: 4   RHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSI--ALTPVIANLI---NPHNPNDPI 56
           R K L + ++L    ++K  +E + ++ EI+  Y I   +TP   +L    NP+  +  +
Sbjct: 247 REKGLETLRELNELGIVKVPEEDLKQV-EIAVKYGIPWGITPYYLHLWDFENPYKEDRHV 305

Query: 57  ARQFIPQKEELNILPEEREDP------IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
            RQ +P    ++ + + RED       +G+++ SPL  I  RY    +LK    CP  C 
Sbjct: 306 RRQVMPPTWYVSNMLQHREDREYYFDFMGEHDTSPLDLITRRYVTIAILKAYDTCPQICV 365

Query: 111 FCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           +C R   V      G+       EAA+ +  E   + +V+ TGGDPL LS K + K++  
Sbjct: 366 YCQRNWEVLEPFMAGSFPGWDKIEAAIEWFGEHESMLDVLITGGDPLALSDKIIDKIMSR 425

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAI 224
           L    HV  +R+ SR+ +  P RI   L + L    +P    V I+ H    YE + E  
Sbjct: 426 LSEFDHVVNIRWGSRIFVTVPMRITNSLAEILGSYIEPGKRNVSISTHFETAYEVTPEVA 485

Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
            A  ++   GI + +Q V  + ++   E +A L     ++ I PYY  +P
Sbjct: 486 EATYKIRRQGIYIYNQLVYQRNVSRRFENVA-LRIALRKVGIDPYYTFYP 534


>gi|156938169|ref|YP_001435965.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis
           KIN4/I]
 gi|156567153|gb|ABU82558.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis
           KIN4/I]
          Length = 621

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 13/246 (5%)

Query: 72  EERE---DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE--MVGSQKGTVL 126
           +ERE   D +G+++ SP   I  RYP   +LK  H CP  C +C R    M    K  + 
Sbjct: 296 DEREYYFDFMGEHDTSPHPLITRRYPMVAILKAAHTCPQICVYCQRNWEIMTAMDKEAIP 355

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +    + A+ +  E   I +V+ TGGDP IL  + ++ ++K L  + HV+++RF +R P+
Sbjct: 356 TRMTIDEAIDWFAEHPNIIDVLVTGGDPFILRDEDIEHIVKRLSELDHVKMIRFGTRTPV 415

Query: 187 VDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
             P RI PE  + L    +P    +++  H  H YE + E   A++ L    I + +Q V
Sbjct: 416 TVPMRITPEFAEMLGSYIEPGKRNIHVVTHVEHAYEVTPEMAEAVTNLRKNKIYVYNQQV 475

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
                +   E  A L      + I PYY  +P     T  + + +    +I+   KE+  
Sbjct: 476 FTFWNSRRFETSA-LRIALKSIGIDPYYTFYPKGKWETKDYLVPV---ARILQERKEEAR 531

Query: 303 GLCQPF 308
            L   F
Sbjct: 532 VLPGTF 537


>gi|253989648|ref|YP_003041004.1| hypothetical protein PAU_02168 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781098|emb|CAQ84260.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 384

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 10/275 (3%)

Query: 55  PIARQFIPQKEELNIL-PEEREDPIGDNNHSPLKG---IVHRYPDRILLKLLHVCPVYCR 110
           P+ R   P KE L +  P E    + D  + P      I+ +Y +R L      C  +C+
Sbjct: 62  PLHRMVYPTKERLLVCAPGEVAYFVDDRENMPEDAPGNIIQKYRNRALFMPTSTCVSHCQ 121

Query: 111 FCFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           +CFR++++  Q   G  +  K      +Y+     I EVI +GGDP+ L  + LQ ++  
Sbjct: 122 YCFRQDVLSEQHETGKTVLDKAILELDSYLSMHPDIQEVILSGGDPMTLPMESLQSIISA 181

Query: 169 LRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227
           ++    V+ +R H++     PQ   + E ++ L  AG  V +  H  HPYE  E     I
Sbjct: 182 IKSHAQVKSIRIHTKTISYFPQVFKSDEKLRLLASAG--VRLVFHLTHPYELCEVVRKTI 239

Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
            R+ + GI   +Q  +L+ IND PE+L   ++T   L I+   +  PD    ++ F +++
Sbjct: 240 KRIQDTGIRCYNQFPILRQINDHPEVLRRHLKTLDCLGIRNLSVFIPDPINFSALFSISL 299

Query: 288 EEGQKIVASLKEKI-SGLCQPFYILDLPGGYGKVK 321
              + I+  L  +  S +    +++D   G  +V+
Sbjct: 300 ARLRNIINELNWRSPSWINSTRFVMDTKVGKVRVR 334


>gi|224007663|ref|XP_002292791.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana
           CCMP1335]
 gi|220971653|gb|EED89987.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana
           CCMP1335]
          Length = 533

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 16/253 (6%)

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G+ H+Y + +L+       C  YC +CFR            + K+ ++   Y+ +  +
Sbjct: 214 LTGVQHKYSETVLVFPSAGQTCHAYCTYCFRWAQFIGDDELRFAQKEAKSLFDYLSKHEE 273

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINP-----E 195
           + +++ TGGDP+++  K L + L+ L    ++ H++ +R  +R     PQR        E
Sbjct: 274 VSDILMTGGDPMVMKTKSLARYLEPLTDPNFLPHIKNIRIGTRSLSFWPQRFTTDDDADE 333

Query: 196 LIQCLK----EAGKPVYIAIHANHPYEFSEEAI-AAISRL-ANAGIILLSQSVLLKGIND 249
           +I+ L+    E G+ V +  H +H  E S + + AAI R+   A   + SQS +++GIND
Sbjct: 334 VIELLRRVREEGGRHVAVMAHLSHARELSTDKVKAAIQRIQKEAFATIRSQSPVMRGIND 393

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
             ++ A   RT V + I PYY+           F + +    KI +      SGL +   
Sbjct: 394 SSDVWAEKWRTEVNMGIIPYYMFLARDTGAQQFFDVPMATAHKIYSDALRNCSGLIRTAR 453

Query: 310 ILDLPGGYGKVKI 322
              +    GKV++
Sbjct: 454 GPSMSCTPGKVEV 466


>gi|270264523|ref|ZP_06192789.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13]
 gi|270041659|gb|EFA14757.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13]
          Length = 449

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 125/260 (48%), Gaps = 15/260 (5%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
           PI DN   PL G+ H+Y + +L        C  YC FCFR             +++++  
Sbjct: 118 PILDN--EPLSGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMDELKFEARNSQML 175

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI 192
           + Y++  +++ +++ TGGDP+I++ + L   ++ L    + H++ +R  ++     PQR 
Sbjct: 176 VEYLKRHTEVTDILITGGDPMIMNARALGDYIRPLLVPELSHIKNIRIGTKSVSYWPQRY 235

Query: 193 -----NPELIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVL 243
                  ++++  +E   +G+ + +  H NHP+E   E A  A+ R+ + G  +  QS L
Sbjct: 236 LTDKDADDVLRIFEEVVASGRNLALMAHYNHPHEIQPEVAQRALKRIISTGATVRMQSPL 295

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           ++ IND+P+  A L  T V L   PYY+          +F + +    +I     + +SG
Sbjct: 296 IRHINDNPKDWATLWTTGVRLGAIPYYMFVERDTGPNDYFGMPLIRAWEIFQEAYKSVSG 355

Query: 304 LCQPFYILDLPGGYGKVKID 323
           L +      +    GK+ ID
Sbjct: 356 LARTVRGPSMSAFPGKIMID 375


>gi|150249481|gb|ABR67759.1| CmnP [Saccharothrix mutabilis subsp. capreolus]
          Length = 448

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 139/308 (45%), Gaps = 29/308 (9%)

Query: 36  SIALTPVIANLINPHNPND--------PIARQFIPQKE----ELNILPEEREDPIGDNNH 83
           S+ L P + N + P    D        P+ R  +P +     E    P    D + +   
Sbjct: 76  SMLLPPQMLNTMVPEGAADFTGAFYADPVRRYMLPVRSDRDPEWPSHPYSSRDSLHEAEM 135

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALA 136
             ++G+ HRYP ++L +L+  CP YC  C R ++VG+    V   K         +  L 
Sbjct: 136 WVVEGLTHRYPTKVLAELVSTCPQYCGHCTRMDLVGNSTPQVRKHKLELKPVDRQDRMLD 195

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPE 195
           Y++    + +V+ +GGD   +   +L+  L  L  I+ V+ +R  ++     PQ  + P+
Sbjct: 196 YLRRTPAVRDVVVSGGDVANVPWPQLESFLARLLEIETVRDIRLATKALAGLPQHWLQPQ 255

Query: 196 LIQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGI 247
           +++ +       A + V +A+H   NH    +     A   L +AG+  + +Q VL++G+
Sbjct: 256 VVEGMSRVARTAASRGVNLAVHTHVNHAQSVTPLVAEAARALLDAGVRDVRNQGVLMRGV 315

Query: 248 NDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           N  P+ L  L      E  I PYY +  D+     H+R ++ E Q + A++   + G   
Sbjct: 316 NATPDDLLELCFALQGEANILPYYFYLCDMIPNAEHWRTSVAEAQDLQAAIMGYLPGYAT 375

Query: 307 PFYILDLP 314
           P  + D+P
Sbjct: 376 PRIVCDVP 383


>gi|293393237|ref|ZP_06637552.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582]
 gi|291424383|gb|EFE97597.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582]
          Length = 174

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/162 (34%), Positives = 88/162 (54%)

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
           L  ++  L  I H++ LR HSR+P+V P R+   L Q L  +   V +  H NH  E   
Sbjct: 7   LDWLIGELEAIPHLKRLRIHSRLPVVIPARVTEALCQRLAASRLQVLMVTHINHANEIDA 66

Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
               ++++L  AG+ LL+QSVLL+ INDD + LA L     +  I PYY+H  D   G +
Sbjct: 67  ALSTSMAQLRRAGVTLLNQSVLLRHINDDADTLAALSNALFDAGILPYYIHVLDKVQGAA 126

Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           HF ++ ++ ++I+ +L  K+SG   P    ++ G   K  +D
Sbjct: 127 HFMVSDDQAREIMKALLSKVSGYLVPRLTREIGGEPSKTPLD 168


>gi|302527347|ref|ZP_07279689.1| CmnP protein [Streptomyces sp. AA4]
 gi|302436242|gb|EFL08058.1| CmnP protein [Streptomyces sp. AA4]
          Length = 463

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 32/311 (10%)

Query: 36  SIALTPVIANLINPHNPNDP-----------IARQFIPQKEELNIL----PEEREDPIGD 80
           S+ L P + N + PH   DP           I R  +P + + +      P    D + +
Sbjct: 88  SMLLPPQMINTMAPHAGTDPAKVTEAFYADPIRRYMLPVRSDRHPAWPSHPHAERDSLHE 147

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAA 134
                ++G+ HRYP ++L +++  CP YC  C R ++VG+    +      L   D + A
Sbjct: 148 AEMWVVEGLTHRYPTKVLAEMISTCPQYCGHCTRMDLVGNSTEQIEKHKLALKPVDRQDA 207

Query: 135 LA-YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-I 192
           +  Y++    + +V+ +GGD   +   +L+  L  L  I+ V+ +R  ++     PQ  +
Sbjct: 208 MTDYLKRTPGVRDVVVSGGDVANVPWPQLESFLMRLMDIETVRDIRLATKALAALPQHWL 267

Query: 193 NPELIQCLKEA-----GKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLL 244
            P++ + L+        + V +AIH   NH    +     A       G+  + +Q VL+
Sbjct: 268 QPKVTEGLQRVALTAQARGVNLAIHTHVNHAQSVTPLVAEAARTALQVGVRDVRNQGVLM 327

Query: 245 KGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           +G+ND P  L +L      E  I PYY +  D+     H+R+ + E Q++  S+   + G
Sbjct: 328 RGVNDTPAALLDLCFALQGEANILPYYFYMCDMIPNAEHWRVAVWEAQELQHSIMGYLPG 387

Query: 304 LCQPFYILDLP 314
              P  + D+P
Sbjct: 388 YATPRIVCDVP 398


>gi|219117417|ref|XP_002179503.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409394|gb|EEC49326.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 470

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 133/293 (45%), Gaps = 23/293 (7%)

Query: 50  HNPNDPIA--RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVC 105
           H   DP+   +     +E+LN  P  +++ +       L G+ H+Y + +L+       C
Sbjct: 114 HKAGDPVKLIKTVAEIREDLNPHPAGQKE-LNAPKEDKLTGVQHKYSETVLVFPAAAQTC 172

Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
             YC +CFR            + K+  +   Y+ E  ++ +++ TGGDP+I+  K L + 
Sbjct: 173 HAYCTYCFRWAQFIGDDELRFAQKEATSLFEYLAEHEEVSDILMTGGDPMIMKTKSLAQY 232

Query: 166 LKTL---RYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEAG-KPVYIAIHA 213
           L+ L    ++ H++ LR  +R     PQR           EL + ++E G + + I  H 
Sbjct: 233 LEPLTDPNFLPHIKNLRIGTRSLSFWPQRFTTDDDADECIELFRRVREQGNRHIAIMAHL 292

Query: 214 NHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
            H  E S    ++A+  I + A A I   SQS +++G+NDD E+ A   R  V++ I PY
Sbjct: 293 GHDRELSTDKFQDAVNRIQKEAYATI--RSQSPIMRGVNDDAEVWARKWRKEVQMGIIPY 350

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           Y+          +F + +    K+ +      SGL +      +    GKV++
Sbjct: 351 YMFMARDTGAQQYFDVPLVRAHKLYSDAIRNCSGLIRTARGPSMSCTPGKVEV 403


>gi|330508808|ref|YP_004385236.1| KamA family protein [Methanosaeta concilii GP-6]
 gi|328929616|gb|AEB69418.1| KamA family protein [Methanosaeta concilii GP-6]
          Length = 582

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 26/291 (8%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEIS------NHYSIALTPVIANLIN--PHN 51
            Q RH      +D+     IK+  ++DE  E S      NH    +TP   +L++  P +
Sbjct: 180 WQFRH----VFKDIQGLETIKRAIKLDEEHEASIRLALENHVPFGVTPHYLHLMDKEPSD 235

Query: 52  PNDPIARQFIPQKEELNILPEEREDP------IGDNNHSPLKGIVHRYPDRILLKLLHVC 105
            +  + RQ  P    +  +   R+D       + + + SP+  I  RYP   ++K    C
Sbjct: 236 MDYAVRRQVFPPLSYVENMIAHRKDKKWAFDFMRERDTSPIDLITRRYPRVAIVKPYESC 295

Query: 106 PVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
           P  C +C R   + S      +   +  EAA+ +  E  ++ +V+ TGGDPL++    + 
Sbjct: 296 PQICVYCQRNWEISSPLMASALAPMEKIEAAIDWFYEHEEMMDVLLTGGDPLVMDDSLID 355

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL---KEAGKP-VYIAIHANHPYEF 219
           ++L  L  I H++ +R  SR P   PQR+  EL + L   +E G+  + +  H  HPYE 
Sbjct: 356 RILNRLSQIPHLKSIRVASRTPATVPQRLTEELCEILGSYQELGRRNLCLVTHFMHPYEV 415

Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           + E +AAI R+   GI + +Q V     +   E  ++L     ++ + PYY
Sbjct: 416 TPETLAAIIRVKKTGIEIYNQQVFTFANSRKFET-SSLRIILKQIGVDPYY 465


>gi|238027720|ref|YP_002911951.1| hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1]
 gi|237876914|gb|ACR29247.1| Hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1]
          Length = 454

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 18/265 (6%)

Query: 77  PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           P G   H+       PL G+ H+Y + +L        C  YC FCFR       +    +
Sbjct: 108 PAGQMTHNVPMLDGRPLPGLQHKYAETVLFFPAAGQTCHAYCSFCFRWPQFIGAEDMKFN 167

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
           +++++    Y++   ++ +V+ TGGDP++++ + L   ++ L  I H+Q +R  ++    
Sbjct: 168 ARESDELSRYLRLHPEVTDVLITGGDPMVMNAESLAGYIEPLLAIPHLQNIRIGTKSVAY 227

Query: 188 DPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILL 238
            PQR   +        L + +   GK + +  H NHP E   E A  A+ R+   G  + 
Sbjct: 228 WPQRFVTDKDADAVLRLFERVVAHGKNLSVMAHYNHPAELRPEIARRAVKRIIGTGATVR 287

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
            QS +++ IND  E    L  T V L   PYY+          +F L + +   I  +  
Sbjct: 288 MQSPIVRHINDSAETWQELWTTGVRLGAIPYYMFVERDTGPQRYFELPLVDAYHIFRNAY 347

Query: 299 EKISGLCQPFYILDLPGGYGKVKID 323
           +++SGL +      +   YGKV +D
Sbjct: 348 QRVSGLSRTVRGPSMSTLYGKVLVD 372


>gi|90423562|ref|YP_531932.1| radical SAM family protein [Rhodopseudomonas palustris BisB18]
 gi|90105576|gb|ABD87613.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18]
          Length = 480

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 139/312 (44%), Gaps = 47/312 (15%)

Query: 42  VIANLINPHN-PNDPIARQFIPQK--------EELNILPEERED---------------- 76
           V+ NLI+    P+DPI +   PQ+        +++  L E  +D                
Sbjct: 55  VVENLIDWSRVPDDPIFQLVFPQRGMLSEVDFDDVRTLVESSDDSEALARAVERIRRRLN 114

Query: 77  --PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
             P G   H+       PL G+ H+Y + ++        C  YC +CFR       +G  
Sbjct: 115 PHPGGQLTHNTATLAGRPLPGVQHKYRETVVFFPAQGQTCHAYCTYCFRWAQFVGMQGMR 174

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSR 183
           + ++ T   +AY++   +I +V+ TGGDP+I++ + L++ ++ L    + H+Q +R  ++
Sbjct: 175 IETRSTSELVAYLRAHPEITDVLITGGDPMIMATRTLRRYIEPLLVPELSHIQNIRIGTK 234

Query: 184 VPIVDPQRI--NPELIQCLK------EAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234
                P R   + +   CL+       A + + I  H  HP E     A  AI R+ + G
Sbjct: 235 SVAYWPHRFVSDADADDCLRLFEEVAAANRHLAIMGHYTHPVELHPALAREAIRRIRDTG 294

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
             +  Q+ L++ +ND PE+ + L RT V L + PYY+          +F + +    +I 
Sbjct: 295 AQIRMQAPLIRHVNDAPELWSELWRTGVRLGLIPYYMFIERDTGPRDYFSVPLVRAHEIF 354

Query: 295 ASLKEKISGLCQ 306
                 +SGL +
Sbjct: 355 RRAAANVSGLAR 366


>gi|224370563|ref|YP_002604727.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum
           HRM2]
 gi|223693280|gb|ACN16563.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum
           HRM2]
          Length = 819

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 16/229 (6%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           +A Q++P KEELN +       IG  +   L+ +   Y +R++  L   CPVYCRFCFR+
Sbjct: 170 VACQYLPFKEELNSVGHTNT-WIGQFHQGLLEQM---YQNRVIFLLNMTCPVYCRFCFRK 225

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
               S+        D   A+A+++    I E++ TGGDP I +   +++ ++ L+ I HV
Sbjct: 226 HK-DSRNEKNPGVDDVSKAVAHVKNSPAIKEIVITGGDPFI-NRNNMERAIQELKEIDHV 283

Query: 176 QILRFHSRVPIVDPQ---RINPELIQCLK-------EAGKPVYIAIHANHPYEFSEEAIA 225
           + LR  +R     PQ   + N   +  LK       + GK + +A H  HP E S ++++
Sbjct: 284 ETLRLATRSIAYYPQLFLKDNSRWLNYLKAKNLELMQKGKRIEVATHFIHPDEVSVQSLS 343

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
            IS L   GI +  Q+  L+G ND+   L  L +       + +Y++ P
Sbjct: 344 IISDLVAGGIGVYVQTPFLEGCNDNGPELVTLFQALRGAGAEIHYIYIP 392


>gi|302867587|ref|YP_003836224.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029]
 gi|315506013|ref|YP_004084900.1| lysine 2,3-aminomutase [Micromonospora sp. L5]
 gi|302570446|gb|ADL46648.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029]
 gi|315412632|gb|ADU10749.1| Lysine 2,3-aminomutase [Micromonospora sp. L5]
          Length = 468

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 142/307 (46%), Gaps = 28/307 (9%)

Query: 36  SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84
           S+ + P + N + PH P        DPI R  IP    ++ +    P    D + +++  
Sbjct: 97  SMLVPPQMLNTMVPHQPMSTEALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 156

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAY 137
             +G+ HRYP ++L +LL  CP YC  C R ++VG+    V   K T       +A + Y
Sbjct: 157 VAEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHITY 216

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196
           ++    + +V+ +GGD   +  + L+  L  L  I+ ++ +R  ++  +  PQ  + P++
Sbjct: 217 LKAHPGVRDVVVSGGDVANVPWRNLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDV 276

Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248
           ++ L+      A + V +AIH   NH    +     A     + G+  + +Q VL++G+N
Sbjct: 277 VEGLERVARTAARRGVNLAIHTHVNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVN 336

Query: 249 DDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
                L +L      E  I PYY +  D+     H+R+ +   Q++   +   + G   P
Sbjct: 337 ATSADLLDLCFALQGEAGILPYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATP 396

Query: 308 FYILDLP 314
             + D+P
Sbjct: 397 RIVCDVP 403


>gi|145595294|ref|YP_001159591.1| hypothetical protein Strop_2771 [Salinispora tropica CNB-440]
 gi|145304631|gb|ABP55213.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440]
          Length = 448

 Score =  100 bits (250), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/338 (23%), Positives = 144/338 (42%), Gaps = 46/338 (13%)

Query: 42  VIANLINPHN-PNDPIARQFIPQKEELNILPEE-------------------------RE 75
           V+++LI+    P+DPI R   PQ+  L    E                            
Sbjct: 54  VLSHLIDWDRIPDDPIFRLVFPQRGMLAAADERLLGDLLGAGDRTGLRVEVARIRAGLNP 113

Query: 76  DPIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVL 126
            P G   H+        L G+ H+Y + +L   +    C  YC +CFR            
Sbjct: 114 HPSGQQQHNVPHLDGHELPGMQHKYRETVLYFPQQGQTCHAYCTYCFRWAQFVGDADLRF 173

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           ++   E  + Y+     + +V+ TGGDP+I+S +RL+  ++ L  +  V+ +RF ++   
Sbjct: 174 AAPGPEQLVTYLHRHPAVTDVLVTGGDPMIMSTERLRSHVEPLLRVDTVRTVRFGTKAVA 233

Query: 187 VDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIIL 237
             P R   +        L   +  AG+ V +  H +HP E + E A  AI+R+ + G ++
Sbjct: 234 YWPYRFVSDSDADDLLRLFAQVVAAGRNVAVMAHFSHPRELATEIATRAIARIRSTGAVV 293

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
             Q+ L++ +NDDP   +++ R  + L   PYY+          +F++ +     I  + 
Sbjct: 294 YCQAPLIRYVNDDPHAWSDMWRAELALGAVPYYMFVERDTGPRDYFQVPLTRAADIFRTA 353

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
            + + GL +      +    GKV +D   +++  +G +
Sbjct: 354 YQDLPGLARTVRGPVMSATPGKVLVD--GVERTPHGEF 389


>gi|257056184|ref|YP_003134016.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017]
 gi|256586056|gb|ACU97189.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017]
          Length = 459

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 138/311 (44%), Gaps = 32/311 (10%)

Query: 36  SIALTPVIANLINPHNPNDP-----------IARQFIP----QKEELNILPEEREDPIGD 80
           S+ L P + N + PH   DP           I R  +P    +  E    P  + D + +
Sbjct: 86  SMLLPPQMLNTMAPHAGTDPAKVTEAFYADPIRRYMLPVHSDRHPEWPSHPHSQRDSLHE 145

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EA 133
                ++G+ HRYP ++L +LL  CP YC  C R ++VG+    V   + T       +A
Sbjct: 146 AEMWVVEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPQVDKHRLTLKPVDRQDA 205

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-I 192
            + Y++    + +V+ +GGD   +   +L+  L  L  I+ V+ +R  S+     PQ  +
Sbjct: 206 MIDYLKRTPGVRDVVVSGGDVANVPWHQLEAFLMRLLDIETVRDIRLASKALAGLPQHWL 265

Query: 193 NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLL 244
            P++++ L       +  G  + I  H NH    +     A       G+  + +Q VL+
Sbjct: 266 QPKVVEGLARVAGTARRRGVNLAIHTHINHVQSVTPLVAEATRAALEVGVRDVRNQGVLM 325

Query: 245 KGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           +G+N  P  L +L      E  I PYY +  D+     H+RL + E Q++  ++   + G
Sbjct: 326 RGVNATPADLLDLCFALQGEANILPYYFYMCDMIPNAEHWRLAVWEAQELQHAIMGYLPG 385

Query: 304 LCQPFYILDLP 314
              P  + D+P
Sbjct: 386 YATPRIVCDVP 396


>gi|284031530|ref|YP_003381461.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM
           17836]
 gi|283810823|gb|ADB32662.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM
           17836]
          Length = 490

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 141/308 (45%), Gaps = 29/308 (9%)

Query: 36  SIALTPVIANLINPHNPND--------PIARQFIP----QKEELNILPEEREDPIGDNNH 83
           S+ L P + N I P    D        P+ R  +P    ++ +    P    D + ++  
Sbjct: 93  SMLLPPQMLNTIVPQGAADYTEAFYADPVRRYMLPMFTDRRTDWPSHPHATRDSLHEHEM 152

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-------KGTVLSSKDTEAALA 136
              +G+ HRYP ++L ++L  CP YC  C R ++VG+        K T+   +  +  L 
Sbjct: 153 WATEGLTHRYPTKVLAEVLPTCPQYCGHCTRMDLVGNSTPVIDKLKFTIKPQQRLDDMLD 212

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ------ 190
           Y++    + +V+ +GGD   +   RL+  L +L  I++++ +R  ++  +  PQ      
Sbjct: 213 YLRRTPGVRDVVVSGGDVANMPWPRLEAFLTSLLEIENIRDIRLATKALMGMPQHWLSDD 272

Query: 191 -RINPELIQCL-KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGI 247
            R   E +  + ++ G  V +  H N     +     A   + +AG+  + +Q VL++G+
Sbjct: 273 VRAGVERVATIARQRGVMVAMHTHVNAAQSVTPLVAEATKAMFDAGLRDVRNQGVLMRGV 332

Query: 248 NDD-PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           ND  P++L           I PYY +  D+   + H+R+++++ Q +   +   + G   
Sbjct: 333 NDSVPQLLDLCFALLDGATITPYYFYMCDMIPFSEHWRVSVKDAQHLQHGILGYLPGFAT 392

Query: 307 PFYILDLP 314
           P  + D+P
Sbjct: 393 PRIVCDVP 400


>gi|311899414|dbj|BAJ31822.1| putative L-lysine 2,3-aminomutase [Kitasatospora setae KM-6054]
          Length = 487

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 31/311 (9%)

Query: 54  DPIARQFIPQKEELNIL----PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           DP+ R  +P + + +      P    D + +     ++G+ HRYP ++L +LL  CP YC
Sbjct: 107 DPVRRYMLPVRSDRHPSWPSHPLAARDSLHEAQMWVVEGLTHRYPTKVLAELLSTCPQYC 166

Query: 110 RFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C R ++VG     V  ++         E  L Y++    + +V+ +GGD   +   RL
Sbjct: 167 GHCTRMDLVGRSTPQVAKARLVLRPADREEQMLDYLKRTPSVRDVVVSGGDLANVPWPRL 226

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKE-----AGKPVYIAI--HAN 214
           +  L  L  +  V+ +R  S+  +  PQ  + P+++  ++      A + V +A+  HAN
Sbjct: 227 ESFLLRLLELGSVRDIRLASKSVVGLPQHWLQPKVLSGVERVARLAARRSVNLAVHTHAN 286

Query: 215 HPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272
           H    +     A   L +AG+  + +Q VL++G+N  P  L +L      E  I PYY +
Sbjct: 287 HAASVTPLVAEAARGLLDAGVRDVRNQGVLMRGVNATPTALLDLCFALQGEANILPYYFY 346

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG----------GYGKVKI 322
             D+     H+RL + E Q +  ++   + G   P  + D+P           GY +V+ 
Sbjct: 347 LCDVIPNAEHWRLPLAEAQHLQEAILGYLPGYATPRLVADVPDVGKRWVHQAVGYDRVRG 406

Query: 323 DTHNIKKVGNG 333
            ++  K    G
Sbjct: 407 ISYWTKNYRTG 417


>gi|302533021|ref|ZP_07285363.1| CmnP [Streptomyces sp. C]
 gi|302441916|gb|EFL13732.1| CmnP [Streptomyces sp. C]
          Length = 463

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/292 (25%), Positives = 136/292 (46%), Gaps = 22/292 (7%)

Query: 53  NDPIARQFIPQKEELNIL----PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
           +DP+ R  +P   + + +    P    D + + +   ++G+ HRYP ++L +LL  CP Y
Sbjct: 116 DDPVRRYMLPVFSDRHPVWPSHPMASRDSLHEQDMWVVEGLTHRYPTKVLAELLSTCPQY 175

Query: 109 CRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
           C  C R ++VG+    V  ++         E  LA+++    I +V+ +GGD   +   R
Sbjct: 176 CGHCTRMDLVGNSTPQVTKNRLQLKPADRAEQILAHLRATPGIRDVVVSGGDLANMPWPR 235

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGKPVYIAIHA 213
           L++ +  L  I+ ++ +R  S+  I  PQ   +P +++ +       +  G  V +  HA
Sbjct: 236 LERFVDGLLDIESIRDIRLASKGLIGLPQHWSSPPVLRGVERVAAKARSRGVRVALHTHA 295

Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYL 271
           N   + +     A   L  AG+  + +Q VL++G+ND    L +L     +   I PYY 
Sbjct: 296 NAAQQVTSGVARAAWGLLGAGLHDVRNQGVLMRGVNDSAHDLLDLCFALCDHAGITPYYF 355

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +  D+     H+R+ +   Q I   +   + G   P  + D+P   GK  +D
Sbjct: 356 YMCDMIPNAEHWRVPLHSAQLIQRQIMGYLPGFATPRIVCDVPMA-GKRWVD 406


>gi|225849592|ref|YP_002729826.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1]
 gi|225646452|gb|ACO04638.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1]
          Length = 438

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/327 (25%), Positives = 139/327 (42%), Gaps = 46/327 (14%)

Query: 42  VIANLINPHNP-NDPIARQFIPQKEEL-------------NILPEE--RED--------- 76
           VI  LIN  +P NDPI R   PQK+ L             N  P+E  RE+         
Sbjct: 44  VIDQLINWEDPLNDPIFRLTFPQKDMLFPEHYELIARLLKNGEPQEKIREEANRIRMELN 103

Query: 77  --PIGDNNHSP------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVL 126
             P G   + P      L G  H+Y + IL   K    C  YC FCFR            
Sbjct: 104 PHPAGQKYNVPEVDGIKLHGAQHKYKETILFFPKQGQTCHAYCSFCFRWPQFVGINELKF 163

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRV 184
           + K+ +  + YI+   +I +++FTGGDPLI+    L+  ++ +    I H++ +R  ++ 
Sbjct: 164 AMKEVDVLIEYIKRNPEITDILFTGGDPLIMKTSVLKSYIQPVLEANIPHLKTIRIGTKS 223

Query: 185 PIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGI 235
               P R   +        L + + + G  +    H NH  E   + +  A+ ++   G 
Sbjct: 224 LGFWPYRFTEDEDAQELLDLFRQIVDRGYHLAFMAHFNHYKELRTDVVREAVDKILETGA 283

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
           ++ +QS +L+ IND  E+ A + +  V + + PYY+          +F + +     I  
Sbjct: 284 VIRTQSPVLRHINDSSEVWATMWKEQVSMGMIPYYMFMARDTGAQHYFGVPLVRAWNIFR 343

Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKI 322
              +K SGL +      +    GKV+I
Sbjct: 344 DAYKKTSGLARTVKGPSMSATPGKVRI 370


>gi|256810214|ref|YP_003127583.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
           fervens AG86]
 gi|256793414|gb|ACV24083.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
           fervens AG86]
          Length = 620

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 11/256 (4%)

Query: 29  KEISNHYSIALTPVIANLINPHNP---NDPIARQFIPQKEELNILPEEREDP------IG 79
           K + N     +TP   +L +  NP   +  + RQ IP +  +  + E +ED       +G
Sbjct: 253 KAVKNGIPFGITPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMMEHKEDRDKAFDFMG 312

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYI 138
           +++ SP+  +  RY    ++K    CP  C +C R  MV           +  E AL + 
Sbjct: 313 EHDTSPIDLVTRRYVPIAIIKPYESCPQICVYCQRNWMVQDFDTKAFKGWEKVEKALDWF 372

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
            E   + E++ TGGDP  LS K ++++L  +  + HV  +RF +R  +  P RI  EL +
Sbjct: 373 AEHDSMIEILITGGDPFSLSDKAIERILNRVSEMDHVIGVRFGTRTIVTAPMRITDELAE 432

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            L    K + ++ H    YE + E    + +L    I + +Q V  + ++   E +A L 
Sbjct: 433 LLGSFEKSLMVSTHVESCYEITPEVKETVEKLRKNNIYVYNQHVFHRYVSRRFENVA-LR 491

Query: 259 RTFVELRIKPYYLHHP 274
               ++ I PYY  +P
Sbjct: 492 IALKKVGIIPYYTFYP 507


>gi|262199318|ref|YP_003270527.1| radical SAM domain-containing protein [Haliangium ochraceum DSM
           14365]
 gi|262082665|gb|ACY18634.1| radical SAM domain-containing protein [Haliangium ochraceum DSM
           14365]
          Length = 458

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 119/238 (50%), Gaps = 13/238 (5%)

Query: 82  NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           N   ++G+ H+Y + +L        C  YC +CFR     S      ++++ E  LAY++
Sbjct: 130 NGKVVRGVQHKYRETVLFFPSQGQTCHSYCTYCFRWAQFISNDELKFAAQEVEPLLAYLK 189

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN---- 193
           E   I +V+FTGGDP+++    L++ ++ L    + HV  +R  ++ P+  P R      
Sbjct: 190 EHPGISDVLFTGGDPMVMKTPVLRRYIEPLLAADLPHVSTIRIGTKAPVYWPYRFTDGND 249

Query: 194 -PELIQCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIN 248
             EL++  +E    GK + + +H +H  E  + E   A++R+   G ++  Q+ L++ +N
Sbjct: 250 ADELLRLFEEIVARGKHLAVLVHFSHYREVEAPEVQTALARIRATGAVIRCQAPLIRHVN 309

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           D PE+   +  + V+    PYY+          +F++ +     I  + ++++SGL +
Sbjct: 310 DTPEVWTRMWHSQVKQGAIPYYMFVERDTGPNEYFKVPLHRALDIFQAARKQLSGLSR 367


>gi|171316099|ref|ZP_02905324.1| radical SAM domain protein [Burkholderia ambifaria MEX-5]
 gi|171098703|gb|EDT43497.1| radical SAM domain protein [Burkholderia ambifaria MEX-5]
          Length = 465

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 13/252 (5%)

Query: 85  PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           PL G+ H+Y + +L        C  YC FCFR             ++ ++   AY++   
Sbjct: 126 PLSGLQHKYRETVLFFPSAGQSCHAYCTFCFRWPQFVGMDELKFDARSSQELTAYLRRHP 185

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPE 195
           ++ +++ TGGDPL++S + L + L+ L      H+Q +R  ++     PQR      + +
Sbjct: 186 EVTDILVTGGDPLVMSARALGEYLEPLLAPEFDHLQNIRIGTKSVAYWPQRFVSDKDSDD 245

Query: 196 LIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDP 251
           L++  ++   +G+ + I  H NHP E     A  A+ R+   G  +  Q+ L++ IN+DP
Sbjct: 246 LLRVFEKVVASGRNLAIMGHYNHPRELQHPIAQRALRRIIGTGASVRIQAPLIRHINEDP 305

Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
              A L  T V L   PYY+        + +F+L +    +I  +    +SGL +     
Sbjct: 306 AAWAELWTTGVRLGAIPYYMFVERDTGPSDYFKLPLARAYEIFQAAYRSVSGLARTVRGP 365

Query: 312 DLPGGYGKVKID 323
            +    GKV +D
Sbjct: 366 SMSAFPGKVMVD 377


>gi|94264369|ref|ZP_01288160.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
 gi|93455198|gb|EAT05414.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
          Length = 598

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 7/218 (3%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEA 133
           D +G+ + SP + I  RYP   +LK  + CP  C +C R   +     KG        EA
Sbjct: 281 DFMGEEDTSPFELITRRYPAICILKPFNTCPQICVYCQRNWEIDEVMAKGAFAGWPRIEA 340

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
           A+ +I E   I EV+ TGGDPL + ++RL ++++ +  I  ++ +R  +R  +  P R  
Sbjct: 341 AIQWIHEHPSIHEVLITGGDPLAMGNERLARIMERVAAIPTIERIRIGTRTLVTMPMRFT 400

Query: 194 PELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
             L+  L    +P    V +  H  HPYE + E   A++RL   GI + +Q V     + 
Sbjct: 401 EGLLSLLARHRQPGRREVAVVTHVQHPYEITPELAEAVNRLRLRGIPVYNQLVYTFYASR 460

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
             E  A L R    + I PYY  +      T+ +R+ I
Sbjct: 461 RFEA-AALRRQLRLIGIDPYYTFNTKGKDETAAYRVPI 497


>gi|224368753|ref|YP_002602914.1| KamA3 [Desulfobacterium autotrophicum HRM2]
 gi|223691469|gb|ACN14752.1| KamA3 [Desulfobacterium autotrophicum HRM2]
          Length = 440

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 13/251 (5%)

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L GI H+Y + +L        C  +C FCFR        G   + KD +  + Y++ + +
Sbjct: 121 LNGIQHKYRETMLFFPTQGQTCHAFCSFCFRWPQFTGMDGHRFAMKDADLMVRYVRSQPE 180

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINP------- 194
           + +++FTGGDPL +S K L   L  +   K   ++ +R  ++     P R          
Sbjct: 181 LTDILFTGGDPLTMSTKILSVYLNAIIDAKLPGIRTIRIGTKTLSFWPYRFTTDKDSAEL 240

Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPE 252
            EL + + +AG  + I  H NHP E +  E   A+  +   G ++ SQS +L  IN   +
Sbjct: 241 LELFKRVTDAGIHLAIMSHLNHPREIATPECKRAVEAIRGTGAVIRSQSPVLNRINASAK 300

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           I + + +  + L I PYY+          +F + + +  KI       +SG+ +      
Sbjct: 301 IWSKMWQDQISLGIVPYYMFVARNTGAQDYFSIPLVDTWKIFRDAYSSVSGISRTVRGPS 360

Query: 313 LPGGYGKVKID 323
           +    GK+KI+
Sbjct: 361 MSASPGKIKIE 371


>gi|212224418|ref|YP_002307654.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1]
 gi|212009375|gb|ACJ16757.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1]
          Length = 636

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 19/288 (6%)

Query: 5   HKTLTSAQDLYNANLIK--KEQIDEI-KEISNHYSIALTPVIANLIN---PHNPNDPIAR 58
            K L   ++L    ++K  +E ++E+ + +       +TP   +L +   P+  +  + R
Sbjct: 237 RKGLEILRELNELGIVKVPEEDLEEVERAVKYRIPWGITPYYLHLWDFKEPYKEDRHVRR 296

Query: 59  QFIPQKEELNIL---PEERE---DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           Q +P K  ++ +    ++RE   D +G+++ SP+  +  RY    +LK    CP  C +C
Sbjct: 297 QVMPPKWYMDNMILHRKDREYAFDFMGEHDTSPIDLVTRRYVMIAILKAFDTCPQICVYC 356

Query: 113 FRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
            R   V      G+       E A+ +  E+  + +V+ TGGDP  LS+K + K++  L 
Sbjct: 357 QRNWEVLEPFMAGSFPGWDKIEKAIEWFGERESMIDVLITGGDPFALSNKIIDKIMSRLS 416

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAA 226
              HV  +R+ +R+P+  P R+  EL + L    +P    V ++ H    YE + E   A
Sbjct: 417 EFDHVINIRWGTRIPVTVPMRVTEELAEILGSYIEPGKRNVAVSTHVETAYEVTPEMARA 476

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           +  L   GI + +Q V  + ++   E +A L     ++ I PYY  +P
Sbjct: 477 VYNLRRQGIYVYNQLVYQRNVSRRFENVA-LRIALKKIGIDPYYTFYP 523


>gi|124003742|ref|ZP_01688590.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
 gi|123990797|gb|EAY30264.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
          Length = 424

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 14/236 (5%)

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEK 141
           +     ++  +PD     +L  C  YC +CFR      S+  +  S KD +  + Y++  
Sbjct: 124 YRSFNNVISLFPD----PMLKTCHAYCSYCFRWIAFNNSEVQSYTSYKDPQTPVTYLKAN 179

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP------- 194
            +I E +FTG DPL L+  ++++ +  L  I  V  +RF+++     P R          
Sbjct: 180 PEINETLFTGADPLTLTAAKIKEYIDPLLTIDSVTTIRFNTKALTWWPFRFTTDKDAKNI 239

Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
            EL + +  +G+ +    H  H  E  ++  I A+  +   G  ++ Q  +++GIND  E
Sbjct: 240 LELFKHIVASGRTLTFCAHLTHVKELQNDNVIEAVKNIQATGAKIICQGPVVEGINDTIE 299

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
              NL    V L ++PYY+         + FR+ + +   I    ++++ GL QPF
Sbjct: 300 DWVNLWSQEVALGLQPYYMFVELNHNAEASFRIPLAKAVHIFQEAEKRVKGLQQPF 355


>gi|161529280|ref|YP_001583106.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus
           SCM1]
 gi|160340581|gb|ABX13668.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus
           SCM1]
          Length = 448

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 157/369 (42%), Gaps = 49/369 (13%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSI-ALTPVIANLINPHN-PNDPIARQF 60
           L+  TL++ +DL     I +E+  E++ + N     A   V+  LIN ++ PNDP+    
Sbjct: 14  LKSYTLSNFRDLPQIQNISEEKQFEMEVVGNVLPFKANNYVVEQLINWNDIPNDPMYVLT 73

Query: 61  IPQ----------------------KEELNILPEERED----PIGD--------NNHSPL 86
            PQ                      KE  N+  E R      P G          + + L
Sbjct: 74  FPQRGMLKPEHYAKMENTLKNTSDKKEIANVANEIRLQLNPHPAGQMELNVPTLKDGTKL 133

Query: 87  KGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y +  L        C  YC FCFR            + ++ E  + Y+ E  +I
Sbjct: 134 YGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMQEGEQLVQYVSEHPEI 193

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRI-----NPELI 197
            +V+FTGGDP+I+  K   K +  L   K  +++ +R  ++     P +      + E++
Sbjct: 194 SDVLFTGGDPMIMKAKMFSKYVDALIEAKLPNLKTIRIGTKALSYWPYKFLTDSDSQEML 253

Query: 198 QCLK---EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEI 253
           Q  +   ++G  +    H NH  E S  A+ +AI  +   G  + +QS LL  INDD E+
Sbjct: 254 QVFQKITDSGLHLAFMAHFNHLNELSTNAVKSAIKEVRKTGAQIRTQSPLLAHINDDAEM 313

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            AN+    V+L   PYY+          +F + + +  +I +     +SGL +      +
Sbjct: 314 WANMWTKQVQLGCIPYYMFVVRDTGAQHYFGVPLVKAYEIFSQAYSTVSGLGRTVRGPSM 373

Query: 314 PGGYGKVKI 322
               GKV++
Sbjct: 374 SATPGKVQV 382


>gi|94271846|ref|ZP_01292023.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
 gi|93450322|gb|EAT01561.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
          Length = 572

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 7/218 (3%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEA 133
           D +G+ + SP + I  RYP   +LK  + CP  C +C R   +     KG        EA
Sbjct: 255 DFMGEEDTSPFELITRRYPAICILKPFNTCPQICVYCQRNWEIDEVMAKGAFAGWPRIEA 314

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
           A+ +I E   I EV+ TGGDPL + ++RL ++++ +  I  ++ +R  +R  +  P R  
Sbjct: 315 AIQWIHEHPSIHEVLITGGDPLAMGNERLARIMERVAAIPTIERIRIGTRTLVTMPMRFT 374

Query: 194 PELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
             L+  L    +P    V +  H  HPYE + +   A++RL   GI + +Q V     + 
Sbjct: 375 EGLLSLLARHRQPGRREVAVVTHVQHPYEITPDLAEAVNRLRLRGIPVYNQLVYTFYASR 434

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
             E  A L R    + I PYY  +      T+ +R+ I
Sbjct: 435 RFEA-AALRRQLRLIGIDPYYTFNTKGKDETAAYRVPI 471


>gi|148255106|ref|YP_001239691.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
 gi|146407279|gb|ABQ35785.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
          Length = 460

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 32/314 (10%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           + ++    +     + +T  I    NPH           P ++    +PE          
Sbjct: 101 DALERALRVGGSAPVEVTAAIHRRFNPH-----------PGRQMTMNMPEL--------G 141

Query: 83  HSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
            S + G+ H+Y +  L+       C  YC FCFR       +   +++ +++  +AYI+E
Sbjct: 142 GSGVSGLQHKYAETCLVFPASGQTCAAYCSFCFRWPQFIGNRDLRMATDESQRFVAYIKE 201

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP---- 194
             +I +V+ TGGDPLI+    L++ L  L    + HV  +R  +++    P R       
Sbjct: 202 HKEISDVLLTGGDPLIMRASVLRRYLLPLLGADLAHVTTIRIGTKMLGFWPYRFTTDDDA 261

Query: 195 ----ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIND 249
                L++ +  +G+ + I +H +HP E  +  A  A+ RL + G +L SQS +++G+ND
Sbjct: 262 DDLIALLEEVVRSGRHLAIMLHISHPRELETAAARRAVQRLLSTGAVLRSQSPVVRGVND 321

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
           D  I   L    V   I PYY+         + F + +    +I      ++SGL +   
Sbjct: 322 DARIWQELWSREVRQGIVPYYMFVLRDTGPRAFFEVPLARALEIYRGGIRQVSGLARSAR 381

Query: 310 ILDLPGGYGKVKID 323
              +    GKV +D
Sbjct: 382 GPIMSTDMGKVAVD 395


>gi|330468030|ref|YP_004405773.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032]
 gi|328811001|gb|AEB45173.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032]
          Length = 467

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/307 (25%), Positives = 143/307 (46%), Gaps = 28/307 (9%)

Query: 36  SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84
           S+ + P + N + P  P        DPI R  IP    ++ +    P    D + +++  
Sbjct: 96  SMLVPPQMINTMVPFAPPSTEALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 155

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---EAALAY 137
             +G+ HRYP ++L +LL  CP YC  C R ++VG+    V    LS K     +A + Y
Sbjct: 156 VAEGLTHRYPTKVLAELLATCPQYCGHCTRMDLVGNSTPAVDKLKLSLKPVDRYDAHITY 215

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196
           ++    + +V+ +GGD   +  + L+  L  L  I+ ++ +R  ++  +  PQ  + P++
Sbjct: 216 LKAHPGVRDVVVSGGDVANVPWRNLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDV 275

Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248
           ++ L+      A + V +AIH   NH    +     A     + G+  + +Q VL++G+N
Sbjct: 276 VEGLERVARTAARRGVNLAIHTHVNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVN 335

Query: 249 DDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
              + L +L      E  I PYY +  D+     H+R+ +   Q++   +   + G   P
Sbjct: 336 ATSKDLLDLCFGLQGEAGILPYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATP 395

Query: 308 FYILDLP 314
             + D+P
Sbjct: 396 RIVCDVP 402


>gi|145594793|ref|YP_001159090.1| radical SAM domain-containing protein [Salinispora tropica CNB-440]
 gi|145304130|gb|ABP54712.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440]
          Length = 491

 Score = 95.9 bits (237), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 141/307 (45%), Gaps = 28/307 (9%)

Query: 36  SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84
           S+ +TP + N + P           DPI R  IP    ++ +    P    D + +++  
Sbjct: 120 SMLVTPQMLNTMVPFESMSTDALYADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 179

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAY 137
             +G+ HRYP ++L +LL  CP YC  C R ++VG+    +   K T       +A ++Y
Sbjct: 180 VAEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHISY 239

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196
           ++    + +V+ +GGD   +  K L+  L  L  I  V+ +R  ++  +  PQ  +  ++
Sbjct: 240 LKAHPGVRDVVVSGGDVANVPWKNLETYLMRLLDIDTVRDIRLATKALMGLPQHWLRADV 299

Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248
           ++ L+      A + V +AIH   NH    +     A     + G+  + +Q VL++G+N
Sbjct: 300 VEGLERVARTAARRGVNLAIHTHVNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVN 359

Query: 249 -DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
              P++L        E  I PYY +  D+     H+R+ +   Q++   +   + G   P
Sbjct: 360 ATTPDLLDLCFALQGEAGILPYYFYMCDMIPNAEHWRVPVGHAQQLQHDIMGYLPGYATP 419

Query: 308 FYILDLP 314
             + D+P
Sbjct: 420 RIVCDVP 426


>gi|302340485|ref|YP_003805691.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM
           11293]
 gi|301637670|gb|ADK83097.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 461

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 120/253 (47%), Gaps = 17/253 (6%)

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G+ H+Y + +L   K    C  YC +CFR       K   ++S + E  + Y+    +
Sbjct: 126 LHGMQHKYDETVLFFPKQGQTCHAYCTYCFRWAQFIGNKELQMASGEVEPLIRYLDRHPE 185

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRI-----NP 194
           + +++ TGGDP+ +    L++ ++ L  ++H    +Q +R  ++     P R      + 
Sbjct: 186 VSDLLITGGDPMFMRSSVLRRYIEPL--LRHRPGNLQTIRIGTKSLSYWPYRYLSDKDSD 243

Query: 195 ELIQCLKE---AGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
           +LI    E   AG  + I  H  H  E S  A+ AAI R+   G I+  QS +++ INDD
Sbjct: 244 DLISLFHEITTAGYHLSIMAHFTHIRELSTLAVEAAIRRIKETGAIIRCQSPIVRHINDD 303

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
             + A + R  V+L + PYY+         ++F + I E  K+ +    ++SGL +    
Sbjct: 304 ASMWAEMWRREVQLGMIPYYMFIARDTGPKAYFDIPIAETLKLFSDAYRQVSGLARTVRG 363

Query: 311 LDLPGGYGKVKID 323
             +    GK+ +D
Sbjct: 364 PSMSAKPGKILVD 376


>gi|118577041|ref|YP_876784.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A]
 gi|118195562|gb|ABK78480.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A]
          Length = 456

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 138/322 (42%), Gaps = 32/322 (9%)

Query: 18  NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE---ER 74
           N++KK   D++               A +I    P + + ++    + ELN  P    E 
Sbjct: 82  NMLKKRHFDQV---------------AQMIKNETPKEEMDKKINDVRMELNPHPAGQLEL 126

Query: 75  EDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
             P    + + L G+ H+Y +  L        C  YC FCFR            + ++ E
Sbjct: 127 NVP-SLKDGTKLYGMQHKYNETCLFFPSQSQTCHAYCTFCFRWPQFVGMDDMKFAMREGE 185

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQ 190
               YI E  +I +V+FTGGDP+I+  K  +  + TL   K  ++  +R  +++    P 
Sbjct: 186 QLAQYIGEHPEISDVLFTGGDPMIMKAKMFRTYVDTLIDAKLPNLTTIRIGTKMLSYWPY 245

Query: 191 RI--------NPELIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQS 241
           ++          +  + + ++G  + I  H NHP E S +A+ +AI ++   G  + +QS
Sbjct: 246 KVLSDDDAAETLDTFRHISDSGLHLSIMGHFNHPVELSTDAVKSAIRKIRATGAQIRTQS 305

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
            LL  INDD +    +    V L   PYY+          +F +++    +I  S   ++
Sbjct: 306 PLLSHINDDADAWVRMWTQQVRLGCIPYYMFIVRDTGAQHYFGMSLARAYEIFTSAYRRV 365

Query: 302 SGLCQPFYILDLPGGYGKVKID 323
           SGL +      +    GKV I+
Sbjct: 366 SGLARTVKGPSMSATPGKVLIN 387


>gi|302531882|ref|ZP_07284224.1| lysine 2,3-aminomutase [Streptomyces sp. AA4]
 gi|302440777|gb|EFL12593.1| lysine 2,3-aminomutase [Streptomyces sp. AA4]
          Length = 460

 Score = 95.1 bits (235), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 131/282 (46%), Gaps = 14/282 (4%)

Query: 56  IARQFIPQKEELNILPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLH--VCPVYCRFC 112
           + R   P +E LN  P ++    +  +    ++G+ H+Y + +L+   H   C  YC +C
Sbjct: 120 LRRAVAPMRERLNPHPGDQLTKNVPQDGSGVVRGLQHKYAETVLVFPSHGQTCHAYCGYC 179

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--R 170
           FR        G      D +  + Y++   ++ +V+FTGGDP+I++   L++ ++ L   
Sbjct: 180 FRWAQFVGMPGLKQQVDDNDRIVDYLRSHREVSDVLFTGGDPMIMTTDVLRQYVEPLLGP 239

Query: 171 YIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE 222
             +H++  RF ++     P R   +        L + +  +G+ V +  H +H  E   +
Sbjct: 240 GFEHLRNFRFGTKALSYWPYRFTTDPDSDDLLRLFEQIVGSGRHVAVMAHFSHARELGTD 299

Query: 223 AIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
           A+A A+ R+ + G ++  Q+ +++ +ND+    A + R  V L   PYY+          
Sbjct: 300 AVARAMRRIRDTGAVVRVQAPIVRHVNDNAPAWAEMWRQSVRLGAVPYYMFVERDTGARE 359

Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           +F L + +   I     +++SGL +      +    GKV +D
Sbjct: 360 YFALPLAQVVDIYRDAFKQVSGLERTARGPVMSASPGKVALD 401


>gi|239944852|ref|ZP_04696789.1| hypothetical protein SrosN15_27950 [Streptomyces roseosporus NRRL
           15998]
 gi|239991318|ref|ZP_04711982.1| hypothetical protein SrosN1_28712 [Streptomyces roseosporus NRRL
           11379]
 gi|291448314|ref|ZP_06587704.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998]
 gi|291351261|gb|EFE78165.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998]
          Length = 448

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 142/339 (41%), Gaps = 47/339 (13%)

Query: 42  VIANLINPHN-PNDPIARQFIPQKEELN-------------------ILPEEREDPIGDN 81
           V++ LI+ H  P DPI +   PQ   L                    I  E R    G N
Sbjct: 54  VLSELIDWHRVPEDPIFQLVFPQHGMLRAEDEKLLVDLARARAPKREIAAEVRRIRAGLN 113

Query: 82  NH--------------SPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125
            H                L+GI H+Y + +L   +    C  YC +CFR           
Sbjct: 114 PHPSGQMELNVPSLADDALEGIQHKYRETVLYFPQQGQTCHSYCTYCFRWAQFIGDADLR 173

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            ++   E  + Y++    + +V+FTGGDP+++S +RL+  L+ +  ++ V+ +R  ++  
Sbjct: 174 FAAPGPERLVEYLRCHPAVSDVLFTGGDPMVMSTERLRSHLEPVLSVETVRTVRIGTKAV 233

Query: 186 IVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGII 236
              PQR   +        L + +  +G+ + +  H +HP E  +  A  A+ R+   G +
Sbjct: 234 AYWPQRFVSDADADDLLRLFEQVVASGRTLAVMAHFSHPRELETATARRALGRVRATGAV 293

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           +  Q+ L+  +NDD    A L R  +     PYY+          +F + + +G +I  +
Sbjct: 294 VYCQAPLIAHVNDDARTWAELWRAELSAGTVPYYMFVERDTGPRHYFEVPLTKGLEIFRT 353

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
              K+ GL +      +    GKV +D   +++   G +
Sbjct: 354 AYSKLPGLARTVRGPVMSATPGKVLVD--GVEETAEGRF 390


>gi|302337139|ref|YP_003802345.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
 gi|301634324|gb|ADK79751.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 818

 Score = 94.4 bits (233), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 122/271 (45%), Gaps = 33/271 (12%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNN------HSPLKGIVHRYPDRILLKLLHVCPVYC 109
           +A Q++P  EEL        DP+G  N      H  L  +   Y +R++  L   CPVYC
Sbjct: 169 VAYQYMPFVEEL--------DPVGHTNTWIGQFHQGL--LEQMYQNRVIFLLNMSCPVYC 218

Query: 110 RFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
           RFCFR+  E    +  TV   +D   A+A++++   I E++ TGGDP  L+   +   + 
Sbjct: 219 RFCFRKHKESRNEKNPTV---EDVNRAIAHVEKSPSIKEIVLTGGDPF-LNRSNMAAAID 274

Query: 168 TLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCLKEA-------GKPVYIAIHANHPY 217
            L  I HVQ LR  +R     P+         +  LK+        GK + IA H  HP 
Sbjct: 275 GLMGIDHVQSLRLATRSLAYYPELFLGKGEWYLNYLKQKNLELQLHGKRMEIATHFIHPD 334

Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP-DL 276
           E S E++  I+ L  +GI +  Q+  L+  ND    L  L R       + +Y++ P   
Sbjct: 335 EVSPESLGIITELVKSGIAVYVQTPFLQHCNDTGPELQKLFRLLRGAGAEMHYIYIPCSP 394

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
             G S +   + +G  I   L+  +S    P
Sbjct: 395 IHGNSVYWSPLSDGIDIAEYLRAHLSDRSVP 425



 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 31/241 (12%)

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L S  TEA + YI+  + I +VI      L      +  ++  +  I HV  +R    +P
Sbjct: 554 LQSDVTEADIDYIRSDTLISDVIIRTSSLLAEELHEISSLIGKIGTIDHVNAVRIS--LP 611

Query: 186 IVD--PQRINPELIQCLKEAGK-----PVYIAIHAN--HPYEFSEEAIAAISRLANAGII 236
            V+  P+ I+P +IQ L    +     P+ + I     +  + +E   A + RL N GI 
Sbjct: 612 EVNYAPESISPAMIQHLASCNRLTVSNPLRLEIETWFINANQITEMHSALVRRLNNKGIT 671

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH---HPDLAAGTSHFRLTIEEGQKI 293
           + + + LL  IND+P+ + NL   +    I+ ++L+   HP   A      + + +   I
Sbjct: 672 VYANTPLLGEINDNPDEIYNLTYAYRRAGIEFHHLYVAGHPIQKAWNEKHPIDMYDVVDI 731

Query: 294 VASLKEKISGLCQPFYILDLP---------------GGYGKVKIDTHNIK--KVGNGSYC 336
            + ++ + SG   P YIL  P               GG  +VK+D++++   K  + SY 
Sbjct: 732 ASKIRREGSGREGPRYILQTPLGDVYYGLTSSFIHGGGDIRVKLDSYDLPYFKALDSSYT 791

Query: 337 I 337
           +
Sbjct: 792 L 792


>gi|269125115|ref|YP_003298485.1| hypothetical protein Tcur_0857 [Thermomonospora curvata DSM 43183]
 gi|268310073|gb|ACY96447.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183]
          Length = 446

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 11/247 (4%)

Query: 88  GIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           G+ H+Y + +L   K    C  YC +CFR      +    L+  D      Y+    ++ 
Sbjct: 139 GMQHKYDETVLYFPKQGQTCHAYCTYCFRWAQFVGEPDLKLAGDDALQLRDYLVAHPRVT 198

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE------LI 197
            V+FTGGD +I+    L++ ++ L  ++ ++ +R  ++     PQ+   +P+      L 
Sbjct: 199 NVLFTGGDAMIMGEPVLRRYVEPLLELEQIESIRIGTKSLAYWPQKFVTDPDADAMLRLF 258

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEILAN 256
           + +  AGK +    H +HP E     +  A+ R+   G ++ +Q+ L++ INDDP++   
Sbjct: 259 EQVVNAGKSLAFMAHFSHPRELEPAMVREAVRRIRGTGAVIRTQAPLIRSINDDPKVWET 318

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           + RT   + + PYY+          +F + +    +I       +SGL +      +   
Sbjct: 319 MWRTQTRMGMVPYYMFVERDTGPRDYFAVPLGRAYEIFRDAYRHVSGLARTVRGPSMSAT 378

Query: 317 YGKVKID 323
            GKV +D
Sbjct: 379 PGKVCVD 385


>gi|308049116|ref|YP_003912682.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
 gi|307631306|gb|ADN75608.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
          Length = 452

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 146/346 (42%), Gaps = 52/346 (15%)

Query: 27  EIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84
           E+K +++     +   +AN LI+  N P DPI +   PQK  L     ER   +   N S
Sbjct: 42  EMKVVASVLPFRVNEYVANDLIDWDNLPADPIFQLSFPQKGMLAPEAFERMATLLRQNPS 101

Query: 85  P---------------------------------LKGIVHRYPDRILL--KLLHVCPVYC 109
           P                                 L G+ H+Y +  L        C  YC
Sbjct: 102 PQQVFELGQTLRAEMNPHPAGQMSMNVPELDGEKLPGMQHKYKETALFFPAQGQYCHSYC 161

Query: 110 RFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
            FCFR  + VG  K    +S D +    Y+    +I +++ TGGDP+++   ++ + ++ 
Sbjct: 162 TFCFRWAQFVG--KAMRFNSNDADTLHRYLAAHPEISDLLITGGDPMVMKTTKIAQYVEP 219

Query: 169 L---RYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPY 217
           L      +HVQ +RF ++     P R   +        L + L +AGK V I  H NH  
Sbjct: 220 LIDNPDTEHVQTVRFGTKALTFWPYRFVTDDDADELLALFRRLVKAGKHVSIMAHLNHWQ 279

Query: 218 EFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
           E        A+ R+   G  + +Q+ LLK IND+ +  A + +  V+L I PYY+     
Sbjct: 280 EMETPIFEEAVRRIRATGANIRAQAPLLKNINDNADDWARMWQKQVKLGIIPYYMFVERD 339

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
                +F + + +  +I      K+SGL +      +  G GKV+I
Sbjct: 340 TGPKRYFEVPLYQAYEIYRDAISKVSGLARTARGPSMSAGPGKVEI 385


>gi|288916751|ref|ZP_06411125.1| conserved hypothetical protein [Frankia sp. EUN1f]
 gi|288351825|gb|EFC86028.1| conserved hypothetical protein [Frankia sp. EUN1f]
          Length = 457

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 145/334 (43%), Gaps = 55/334 (16%)

Query: 52  PNDPIARQFIPQKEELNILPEEREDPIGD----------------------NNH------ 83
           P+DPI R   PQ    ++LP E+  PI                        N H      
Sbjct: 67  PDDPIYRLVFPQP---DMLPAEQVAPIAQLLARGAPTREVQAAAAAVRAALNPHPAGQRE 123

Query: 84  --------SPLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
                   + L G+ H+YP+ +L    H   C  YC +CFR      +    ++S++ + 
Sbjct: 124 LNVPELAGTRLDGLQHKYPETVLYFPAHGQTCHAYCTYCFRWAQFVQEPHLRMASRNVDD 183

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQ 190
            + Y++   ++ +V+ TGGDP+++S + L + +  L     + H+Q +R  ++     P 
Sbjct: 184 LVTYVRAHPEVTDVLITGGDPMVMSAEMLARCVLPLLDEPGLGHLQSIRIGTKSLSYWPA 243

Query: 191 RI--NP------ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQS 241
           R   +P       L + +  +G+ + +  H +HP E  ++ A  A+ R+ + G ++ +Q 
Sbjct: 244 RFVTDPGADDTLRLFERVVASGRSLALMAHYSHPRELETDVAEHAVRRVLSTGAVIRTQG 303

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
            +++ +NDD    A + +  V L + PYY+          +F + +    +I ++    +
Sbjct: 304 PVIRSVNDDAGAWAAMWQRQVRLGMVPYYMFVERDTGPRGYFEVALLRAYEIFSAAYRSV 363

Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
           SGL +      +    GKV +D   +  VG   Y
Sbjct: 364 SGLARTVRGPVMSATPGKVVVD--GVHTVGAEKY 395


>gi|153875079|ref|ZP_02003031.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
 gi|152068457|gb|EDN66969.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
          Length = 314

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 13/245 (5%)

Query: 91  HRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           H+Y + +L        C  YC FCFR           L+S++ +A + Y+ E  ++ +++
Sbjct: 3   HKYRETVLFFPSQGQTCHAYCSFCFRWPQFVGISDLKLASREVDALIQYVSEHPEVSDIL 62

Query: 149 FTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------LIQCL 200
            TGGDP+I+  + L   +  L    + H++ +R  ++     P R   +      L    
Sbjct: 63  LTGGDPMIMKTRILATYIDALLEANLPHLKTIRIGTKALSYWPYRFTSDADAEDLLTLFA 122

Query: 201 KEAGKPVYIAI--HANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEILANL 257
           K A K  ++A   H NHP E   +A+  AI  +   G  + +QS LL  IND PEI A +
Sbjct: 123 KVATKNKHLAFMAHFNHPRELKTDAVREAIKGIRETGAQIRTQSPLLAHINDQPEIWAEM 182

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
            +T  EL   PYY+          +F +++     I  +  + ++GL +      +    
Sbjct: 183 WKTQTELGCIPYYMFITRDTGAQHYFGVSLIRAWDIFKNAYQNVTGLARTVRGPSMSATP 242

Query: 318 GKVKI 322
           GKV++
Sbjct: 243 GKVQM 247


>gi|159037977|ref|YP_001537230.1| lysine 2,3-aminomutase [Salinispora arenicola CNS-205]
 gi|157916812|gb|ABV98239.1| Lysine 2,3-aminomutase [Salinispora arenicola CNS-205]
          Length = 467

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 28/307 (9%)

Query: 36  SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84
           S+ + P + N + P  P        DPI R  IP    ++ +    P    D + +++  
Sbjct: 96  SMLVPPQMLNTMVPFAPMTTEALYADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 155

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAY 137
             +G+ HRYP ++L +LL  CP YC  C R ++VG+    +   K T       +A + Y
Sbjct: 156 VAEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHITY 215

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196
           ++    + +V+ +GGD   +  + L+  L  L  I+ V+ +R  ++  +  PQ  +  ++
Sbjct: 216 LKAHPGVRDVVVSGGDVANVPWRNLESYLMRLLDIETVRDIRLATKALMGLPQHWLRADV 275

Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248
           ++ L+      A + V +AIH   NH    +     A     + G+  + +Q VL++G+N
Sbjct: 276 VEGLERVARTAARRGVNLAIHTHVNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVN 335

Query: 249 -DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
              P++L        E  I PYY +  D+     H+R+ +   Q++   +   + G   P
Sbjct: 336 ATTPDLLDLCFALQGEAGILPYYFYLCDMIPNAEHWRVPVGYAQQLQHDIMGYLPGYATP 395

Query: 308 FYILDLP 314
             + D+P
Sbjct: 396 RIVCDVP 402


>gi|113477791|ref|YP_723852.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101]
 gi|110168839|gb|ABG53379.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101]
          Length = 445

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 14/274 (5%)

Query: 64  KEELNILPE-EREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGS 120
           +++LN  P  +++  +   N  P+ GI H+Y + +L+       C  YC FCFR      
Sbjct: 105 RQQLNPHPSGQKQHNVPTFNSEPVPGIQHKYRETVLVFPTAGQTCHAYCTFCFRWPQFVG 164

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQIL 178
            +G   +++++     Y+Q+  ++ +V+FTGGDP+ +  ++L   +  L   K  H+Q +
Sbjct: 165 LEGLKFATRESGMFQQYLQQHQEVRDVLFTGGDPMTMKARQLSLYIDPLLEAKFDHIQTI 224

Query: 179 RFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISR 229
           R  ++     P R   +        L + + + GK + I  H  H  E     A  AI R
Sbjct: 225 RIGTKSISFWPYRYVTDEDADNTLRLFEKIVKRGKHLAIMAHYEHWQELDTPVATEAIRR 284

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
           + + G  + +Q+ +++ IND  E  A +++  V L   PYY+          +F + +  
Sbjct: 285 IRSTGAQIRTQAPVVRHINDSAETWAKMLQMQVSLGCIPYYMFVERQTGAKKYFEIPLVR 344

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             +I     +++SGL +      +    GKV ID
Sbjct: 345 VLEIYREAVKQVSGLARTIRGPLMSALPGKVAID 378


>gi|256394391|ref|YP_003115955.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928]
 gi|256360617|gb|ACU74114.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928]
          Length = 441

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 14/281 (4%)

Query: 56  IARQFIPQKEELNILPEERED-PIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFC 112
           +AR     +  +N  PE ++D  +  +   PL G  H+Y   +L        C  YC +C
Sbjct: 100 LARTIAAIRAGMNPHPEHQQDLNVPSDPDGPLPGTQHKYEQTLLYFPAAGQTCHAYCTYC 159

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FR      +     S+ D   A+AY++   ++ +V+ TGGDP++++ +RL++ L+    +
Sbjct: 160 FRWAQFVGEPELRFSAADPARAVAYLRRHPEVTDVLVTGGDPMVMTAERLRQHLEPFLAV 219

Query: 173 KHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
           + +Q +R  ++     P R   +        L + + EAGK   +  H +HP E  E AI
Sbjct: 220 ESLQTVRIGTKSVASWPHRYVSDHDADATLRLFEQIAEAGKTPALMAHLSHPVEL-EPAI 278

Query: 225 A--AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
           A  A+SR+ + G ++  Q+ ++  +NDD    A L R        PYY+          +
Sbjct: 279 ARTALSRIRDTGALVYCQAPIIGRVNDDAAAWARLWRAEQRAGAVPYYMFVARDTGPRDY 338

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           F++ +    ++       + GL +      +    GKV +D
Sbjct: 339 FKVPLARAAEVFRDAYSALPGLARTVRGPVMSTTGGKVVVD 379


>gi|289665700|ref|ZP_06487281.1| hypothetical protein XcampvN_22139 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 217

 Score = 93.2 bits (230), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 2/145 (1%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+C
Sbjct: 75  HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 134

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    +++ T       EA  A I     I EV+ +GGDPL L+  +L ++   L  I
Sbjct: 135 FRRHFPYAEE-TAARDGWREAG-AAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAI 192

Query: 173 KHVQILRFHSRVPIVDPQRINPELI 197
            H++ LR HSR+PIV P+R++  L+
Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLL 217


>gi|329765548|ref|ZP_08257124.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329137986|gb|EGG42246.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 455

 Score = 92.4 bits (228), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 13/254 (5%)

Query: 82  NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           + + L G+ H+Y +  L        C  YC FCFR            + ++ E  + Y++
Sbjct: 130 DGTKLYGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDELKFAMREGEQLVQYLR 189

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI----- 192
           E  +I +V+FTGGDP+I+  K     +  L    + +++ +R  ++     P +      
Sbjct: 190 EHPEISDVLFTGGDPMIMKAKIFSTYINPLLEANLPNLRTIRIGTKALSYWPYKFLTEDD 249

Query: 193 NPELIQCLKE-AGKPVYIAI--HANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGIN 248
             E++   K    K +++A+  H NH  E   +A+  AI ++   G  + +QS LL+ IN
Sbjct: 250 AEEMLDIFKRVVDKGIHLAVMGHFNHLVELKTDAVKEAIKKIRATGAQIRTQSPLLRHIN 309

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           DD ++ A + +  V+L   PYY+          +F +++ + Q+I     +K++GL +  
Sbjct: 310 DDADMWAEMWKVQVQLGCIPYYMFVVRDTGAQHYFGISLIDAQRIFRDAYKKVTGLARTV 369

Query: 309 YILDLPGGYGKVKI 322
               +    GKV+I
Sbjct: 370 RGPSMSATPGKVQI 383


>gi|331005683|ref|ZP_08329048.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989]
 gi|330420506|gb|EGG94807.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989]
          Length = 146

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 1/131 (0%)

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGII 236
           +R HSR+P+V P RI  E I+ + +      + +H NH  E     +  AIS++ NAGI 
Sbjct: 1   MRIHSRLPVVIPDRITAESIEWMSQTRLATVMVLHINHAQELKNGILRTAISQMKNAGIT 60

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           +L+QSVLLKGIND  +  A L  T  +  + PYYLH  D   G++HF    +  + +  +
Sbjct: 61  VLNQSVLLKGINDTLDTQAELSETLFDAGVLPYYLHVLDKVQGSAHFDTMDDRAKTLHKA 120

Query: 297 LKEKISGLCQP 307
           +  K+ G   P
Sbjct: 121 MTAKLPGYLVP 131


>gi|256377785|ref|YP_003101445.1| lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
 gi|255922088|gb|ACU37599.1| Lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
          Length = 459

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/282 (24%), Positives = 132/282 (46%), Gaps = 21/282 (7%)

Query: 54  DPIARQFIPQKEELN----ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           DP+ R  +P + + +      P    D + +     ++G+ HRYP ++L +L+  CP YC
Sbjct: 115 DPVRRYMLPVRSDRDPDWPSHPHSSRDSLHEAEMWVVEGLTHRYPTKVLAELVSTCPQYC 174

Query: 110 RFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C R ++VG+    V   K         +  + Y++    + +V+ +GGD   +   +L
Sbjct: 175 GHCTRMDLVGNSTPQVAKHKLALKPVDRQDRIVEYLKSTPGVRDVVVSGGDVANVPWPQL 234

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKE-----AGKPVYIAIHA--N 214
           +  L  L  ++ V+ +R  ++     PQ  + P++++ L+      A + V +AIH   N
Sbjct: 235 ESFLMRLLGVETVRDVRLATKALAGLPQHWVQPQVVEGLERVARTAARRGVNLAIHTHVN 294

Query: 215 HPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272
           H    +   A AA + LA     + +Q VL++G+N     L +L      E  + PYY +
Sbjct: 295 HANSVTPLVAEAARTALAVGVRDVRNQGVLMRGVNATATDLLDLCFALQGEAGVLPYYFY 354

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
             D+     H+R+ + E Q++  ++   + G   P  + D+P
Sbjct: 355 MCDMIPNAEHWRVAVWEAQELQHAIMGYLPGYATPRIVCDVP 396


>gi|260828943|ref|XP_002609422.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae]
 gi|229294778|gb|EEN65432.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae]
          Length = 512

 Score = 90.9 bits (224), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 139/300 (46%), Gaps = 24/300 (8%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEERED---PIGDNNHSPLKGIVHRYPDRILL 99
           I+ L+  + P   + R+    ++E+N  P +++    P  D +  PL G+ H+Y + +L 
Sbjct: 127 ISKLMKNNAPRTVLQREAEVIRKEMNPHPAQQKTMNVPRVDGH--PLPGLQHKYRETVLF 184

Query: 100 --KLLHVCPVYCRFCFRREM---VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
                  C  YC +CFR      VGS +     S D++    Y++    + +++ TGGDP
Sbjct: 185 FPAEGQFCHAYCTYCFRWAQFTSVGSPQQ--FQSDDSKLLQLYLRRNRHVSDLLLTGGDP 242

Query: 155 LILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRI-----NPELIQCLKE---A 203
           +++S +RL   +  L     + ++  +R  ++     P R      + +L++  +E   +
Sbjct: 243 MVMSAQRLGGYILPLLKDTCLDNLSTIRIGTKSLAYWPYRYVTDSDSDDLLRIFEEVVKS 302

Query: 204 GKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           G+ + I  H +HP E S   +  AI RL   G ++ +Q+ L+  +N DP   A L+RT  
Sbjct: 303 GRQLAIMAHFSHPRELSTPTVQEAIRRLRMTGAVIRAQAPLVNHVNADPATWARLIRTET 362

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            L + PYY+          +F + +    +I +     +SGL +      +    GKV +
Sbjct: 363 RLGVIPYYMFVERDTGARHYFEVPLARAVEIYSQAFSSVSGLGRTLRGPSMSATPGKVHV 422


>gi|297196895|ref|ZP_06914292.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083]
 gi|197711500|gb|EDY55534.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083]
          Length = 438

 Score = 90.5 bits (223), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 76/342 (22%), Positives = 141/342 (41%), Gaps = 53/342 (15%)

Query: 42  VIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPI---------------------- 78
           V+  LI+  +P  DPI R   PQ+    +LPE+ E  +                      
Sbjct: 54  VLDQLIDWTDPAQDPIFRLVFPQR---GMLPEDDERSLESLVRSGAAKREMAAEVARIRA 110

Query: 79  GDNNHSP--------------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQK 122
           G N H                L G+ H+Y + +L        C  +C +CFR        
Sbjct: 111 GLNPHPSGQREYNVPVHEGERLAGLQHKYRETVLYFPTQGQSCHSFCTYCFRWAQFVGDP 170

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               ++   +  ++Y+ +  ++ +V+ TGGDP+++S +RL   L+ L  ++ V  +R  +
Sbjct: 171 SLRFAAPGPDRLVSYLHDHPEVSDVLVTGGDPMVMSTERLTGHLEPLLGVESVNTVRIGT 230

Query: 183 RVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANA 233
           +     PQR   +        L + +   GK V +  H  HP E     +  A+ R+   
Sbjct: 231 KSLAYWPQRFVSDADADSLLRLFERIAATGKQVAVMAHFTHPRELRTARVTEAVRRIRAT 290

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           G ++  Q+ ++  INDD E  A++ ++ + L   PYY+          +F++ +    +I
Sbjct: 291 GAVVYCQAPMVAHINDDAETWASMWKSELALGAVPYYMFVERDTGPYDYFKVPLARAMEI 350

Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
             +    + GL +      +    GKV +D   ++ +G   Y
Sbjct: 351 FHTAYRTLPGLARTVRGPVMSTTPGKVVVD--GVETLGGDRY 390


>gi|167042471|gb|ABZ07196.1| putative Radical SAM superfamily protein [uncultured marine
           crenarchaeote HF4000_ANIW133C7]
          Length = 447

 Score = 89.7 bits (221), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 13/254 (5%)

Query: 82  NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           + + L G+ H+Y +  L        C  YC FCFR            + ++ E  + Y++
Sbjct: 131 DGTKLYGMQHKYDETCLFFPSQSQTCHAYCTFCFRWPQFVGMDEMKFAMREGEQLVQYLK 190

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRI--NPE 195
           E  ++ +V+FTGGDP+I+          TL   K  +++ +R  ++     P +   + +
Sbjct: 191 EHPEVTDVLFTGGDPMIMKASMFSAYTDTLLDAKLPNLKTIRIGTKAISYWPYKFLTDSD 250

Query: 196 LIQCLK------EAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGIN 248
             + LK      ++G  + I  H NH  E S + I  AI R+   G  + +QS LL  IN
Sbjct: 251 ADETLKNFEKIVKSGTHLAIMAHFNHLVELSTDPIKEAIKRIRKTGAQIRTQSPLLAHIN 310

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           DD  + A + +  V L   PYY+          +F + + + +KI  S   ++SGL +  
Sbjct: 311 DDSSMWAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRSAFRQVSGLARTV 370

Query: 309 YILDLPGGYGKVKI 322
               +    GKV +
Sbjct: 371 RGPSMSATPGKVHV 384


>gi|332706173|ref|ZP_08426242.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L]
 gi|332355010|gb|EGJ34481.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L]
          Length = 445

 Score = 88.6 bits (218), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 13/234 (5%)

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + GI H+YPD +L+       C  YC+FCFR            +++++     Y+++  +
Sbjct: 127 ISGIQHKYPDTVLIFPSSGQACHAYCQFCFRWAQFVDTNTHKFTTRESGRFQDYLRQHKE 186

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------ 195
           + +V+ TGGDP+I+S +RL + ++ L     +H+Q +R  ++     P R   +      
Sbjct: 187 VTDVVLTGGDPMIMSARRLFQYIEPLLDPEFEHIQTIRIGTKSVAYWPYRYVTDRDADDV 246

Query: 196 --LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPE 252
             L + +  +GK + +  H  H  E     A  AI R+ + G  L +QS LLK +ND   
Sbjct: 247 LRLFEKIVYSGKHLAVMGHYTHWRELDTPIAQEAIRRIRSTGAQLRAQSPLLKHVNDSAR 306

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
               + +  V L   PYY+          +F + +    +I     + +SGL Q
Sbjct: 307 AWRKMWQMQVRLGCIPYYMFVERDTGPKHYFGIPLVRTWEIFRHAIKGVSGLSQ 360


>gi|167045081|gb|ABZ09744.1| putative Radical SAM superfamily protein [uncultured marine
           crenarchaeote HF4000_APKG8I13]
          Length = 449

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 13/254 (5%)

Query: 82  NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           + + L G+ H+Y +  L        C  YC FCFR            + ++ E  + Y++
Sbjct: 131 DGTKLYGMQHKYDETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMREGEQLVQYLK 190

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRI--NPE 195
           E  +I +V+FTGGDP+I+           L   K  +++ +R  ++     P +   + +
Sbjct: 191 EHPEISDVLFTGGDPMIMKASMFSVYTDALLDAKLPNLKTIRIGTKAISYWPYKFLTDSD 250

Query: 196 LIQCLK------EAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGIN 248
             + LK      E+G  + I  H NH  E S + I  A+ R+   G  + +QS LL  IN
Sbjct: 251 ADETLKNFEKIVESGTHLAIMAHFNHLVELSTDPIKEAVKRIRKTGAQIRTQSPLLAHIN 310

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           DD ++ A + +  V L   PYY+          +F + + + +KI      ++SGL +  
Sbjct: 311 DDTDMWAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRDAFRQVSGLARTV 370

Query: 309 YILDLPGGYGKVKI 322
               +    GKV +
Sbjct: 371 RGPSMSATPGKVHV 384


>gi|295401598|ref|ZP_06811566.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976365|gb|EFG51975.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 154

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 4/142 (2%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           I KE+ +++K+I+N Y   +     NLIN  +PNDPI +  IP + ELN       D   
Sbjct: 16  IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPNEGELNEYGS--WDASD 73

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +  +  + G  H+Y    LL +  VC  YCRFCFR+ +  S     +S  D    + YI 
Sbjct: 74  EEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVKEAMS--DVTPGIEYIA 131

Query: 140 EKSQIWEVIFTGGDPLILSHKR 161
           +  +I  V+ TGGD LIL+ K+
Sbjct: 132 QTPEINNVLLTGGDSLILATKK 153


>gi|213416979|ref|ZP_03350123.1| hypothetical protein Salmonentericaenterica_03062 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 141

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 72/135 (53%)

Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
           P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G+N
Sbjct: 1   PARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVN 60

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           D+ + LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   P 
Sbjct: 61  DNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPR 120

Query: 309 YILDLPGGYGKVKID 323
              ++ G   K  +D
Sbjct: 121 LAREIGGEPSKTPLD 135


>gi|297570169|ref|YP_003691513.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926084|gb|ADH86894.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 594

 Score = 87.4 bits (215), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 7/218 (3%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEA 133
           D +G+ + SP   I  RYP   +LK  + CP  C +C R   +      G     +  + 
Sbjct: 277 DFMGEEDTSPFDLITRRYPAICILKPYNTCPQICVYCQRNWEIDEVMAPGAFAGMEKIKE 336

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
           A+ +I +   I EV+ TGGDPL + ++ L ++++ +  I  V+ +R  +R  +  P R  
Sbjct: 337 AIDWIHDHPAIHEVLITGGDPLAMGNETLAEIIERVAAIPTVERIRLGTRTLVTMPMRFT 396

Query: 194 PELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
             L   +    +P    V +  H  HPYE + E + A++RL   GI + +Q V    I+ 
Sbjct: 397 EGLAGLIARHHRPGRREVAVMTHVQHPYEITPEMVEAVNRLRQLGIPVYNQLVYTFFISR 456

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
             E  A L R      I PYY  +      T  +R+ I
Sbjct: 457 RFEA-ACLRRQLRLSGIDPYYTFNTKGKDETIGYRVPI 493


>gi|256376813|ref|YP_003100473.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
 gi|255921116|gb|ACU36627.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
          Length = 450

 Score = 86.3 bits (212), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 118/249 (47%), Gaps = 11/249 (4%)

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G+ H+Y +  L   +    C  YC +CFR            ++   E  + Y+++   
Sbjct: 131 LPGVQHKYRETALYFPQQGQTCHAYCTYCFRWAQFVGDADLRFAAPGPELLVRYLRQHPA 190

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK 201
           + +V+ TGGDP+I+S +RL+  L+ L  +  V+ +R  ++     P R   +P+  + L+
Sbjct: 191 VTDVLVTGGDPMIMSTERLRSHLEPLLAVDTVRTIRIGTKSVAYWPHRFTTDPDADEVLR 250

Query: 202 ------EAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
                  +G+ + +  H +HP E  +++A AA++R+   G ++  Q+ L+K +NDD  + 
Sbjct: 251 LFERVVASGRSLAVMAHFSHPRELETDQARAALARIRATGAVVYCQAPLIKHVNDDSRVW 310

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           A++ R  +   + PYY+          +F++ +     I       + GL +      + 
Sbjct: 311 ADMWRGELSAGLVPYYMFVERDTGPREYFKVPLARAVDIFQGAYRTLPGLARTVRGPSMS 370

Query: 315 GGYGKVKID 323
              GKV +D
Sbjct: 371 ATPGKVLVD 379


>gi|332975101|gb|EGK12006.1| protein of hypothetical function DUF160 [Desmospora sp. 8437]
          Length = 187

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 3/117 (2%)

Query: 193 NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
           + EL+  L E       +++  H NHP E +++A  AI  L  AG+IL++Q+ +LKGIND
Sbjct: 6   DKELLDTLSEYSLGDSRIHVMAHFNHPRELTDQAYRAIDALQRAGVILVNQTPVLKGIND 65

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           DPEILA L+       + PYY       AG + F LT  E  +++   K + SGL +
Sbjct: 66  DPEILAELLDKLSWAGVTPYYFFQNRPVAGNADFVLTFREAYEVIEQAKARTSGLGK 122


>gi|213024108|ref|ZP_03338555.1| hypothetical protein Salmonelentericaenterica_16976 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 105

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/104 (42%), Positives = 62/104 (59%)

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           GDPL+     L  +L  L  IKHV+ LR HSR+PIV P RI  EL+    ++   + +  
Sbjct: 1   GDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVN 60

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
           H NH  E  E    A+ +L + G+ LL+QSVLL+G+ND+ + LA
Sbjct: 61  HINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLA 104


>gi|83859269|ref|ZP_00952790.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852716|gb|EAP90569.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 481

 Score = 82.8 bits (203), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 43/302 (14%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNN------HSPLKGIVHRYPDRILLKLLHVCPVYC 109
           +A++    K  +   PEE ED  G+ +      +SP+ G++H+Y +  L+ ++  C  +C
Sbjct: 88  LAKRSTAVKNLIKARPEEMEDLSGEADPSNQLKYSPIPGLLHKY-ELCLVYVVRTCSSWC 146

Query: 110 RFCFRREMVGSQKGTVLSS----KD------TEAALAYIQEKSQIWEVIFTGGDPLILSH 159
           R+C+R + +  + G   +S    KD       +     I  K ++ EV+ +GGDP++LS+
Sbjct: 147 RYCYRSDFLTGKTGKDTASIHEVKDYIETHNAKVERGEITHKPKVREVLLSGGDPMVLSN 206

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK---EAGKPVYIA--IHAN 214
           + L   L  L     V+++R  ++     P+R +    + L    E    V +A  +H  
Sbjct: 207 RNLFDYLNGLAEAG-VEVIRIGTKEMAFYPERFDDNFFRMLDLFHEVHPQVLVAFMVHFT 265

Query: 215 HPYEFSEEAI--------------------AAISRLANAGIILLSQSVLLKGINDDPEIL 254
           HP EF    +                    AA    A   + L +Q+ ++ G+NDD + L
Sbjct: 266 HPDEFLRLDVNGDYVRDERGRPLRNPLVEQAATRLRARPFVTLENQTPIIDGVNDDADAL 325

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
             + +    + +  +Y        G   F + +E+  K+ A  +  +SG+ +  + L   
Sbjct: 326 RLMQQELKRMGVNNHYFFQCREIEGFRAFAVPVEKAWKLHAESQHGLSGIERSRFALSTE 385

Query: 315 GG 316
            G
Sbjct: 386 AG 387


>gi|289665699|ref|ZP_06487280.1| Putative radical SAM superfamily protein [Xanthomonas campestris
           pv. vasculorum NCPPB702]
          Length = 123

 Score = 81.6 bits (200), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 61/114 (53%)

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           PV   +HANH  EF     AA+  L +AG  LL+Q+VLL+G+ND  + LA L        
Sbjct: 7   PVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDALAALSERSFAAG 66

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
           + PYYLH  D  AG +HF +     + +   L  ++SG   P  + ++PG  GK
Sbjct: 67  VLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIPGDTGK 120


>gi|111019966|ref|YP_702938.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
 gi|110819496|gb|ABG94780.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
          Length = 440

 Score = 80.5 bits (197), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 32/273 (11%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHV 104
           +NPH P D ++   +PQ ++++                   G+ H+Y + +L+  +    
Sbjct: 111 LNPH-PGDQLSMN-VPQHDDIDG-----------------SGMQHKYAETLLVFPRQGQT 151

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C  YC +CFR           ++    EA   Y+     I +V+ TGGDPL++  + L  
Sbjct: 152 CHSYCGYCFRWAQFVDTPDLKMAMSGPEAMTRYLDLHPGITDVLLTGGDPLVMRTELLAS 211

Query: 165 VLKTLRY--IKHVQILRFHSRVPIVDPQRI--NPE------LIQCLKEAGKPVYIAIHAN 214
            L+ L     +HV+ +R  ++     P R+   PE      L++ L  AGK V + +H +
Sbjct: 212 YLEPLLEPEREHVETIRIGTKAVSFWPYRLLAGPEADDLLRLLERLTAAGKHVAMMLHLS 271

Query: 215 HPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           H  E  ++ A  A++RLA+ G +L +Q+ +++ +NDDP   A+L +  V  R+ PYY+  
Sbjct: 272 HVAELQTDAARTALARLASTGAVLRAQAPVVRHVNDDPRTWADLWQAQVRNRVVPYYMFV 331

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
                   +F L +     I     +++SGL +
Sbjct: 332 ERDTGARPYFGLPLARAVDIYREALQRVSGLGR 364


>gi|213584604|ref|ZP_03366430.1| hypothetical protein SentesTyph_26615 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 125

 Score = 79.7 bits (195), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 41/112 (36%), Positives = 62/112 (55%)

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
           H NH  E  E    A+ +L + G+ LL+QSVLL+G+ND+ + LANL     +  + PYYL
Sbjct: 8   HINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYL 67

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           H  D   G +HF +T +E ++I+  L   +SG   P    ++ G   K  +D
Sbjct: 68  HVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 119


>gi|332975102|gb|EGK12007.1| lysine 2,3-aminomutase [Desmospora sp. 8437]
          Length = 189

 Score = 68.9 bits (167), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 4/133 (3%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           I +E+ +++ +I+N +   L     +LI+ ++PNDPI +  IP + EL+     + D   
Sbjct: 26  IPEEKREKLTKITNKFVFRLNDYYLSLIDWNDPNDPIYKLIIPSEAELDEY--GKWDASD 83

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +  +  + G  H+Y    LL +  VC  YCRFCFR+ +   +     +S D    + YI+
Sbjct: 84  EYTNYVVPGCQHKYQTTALLIVSEVCGAYCRFCFRKRLF--RNDVHEASLDVAPGVEYIR 141

Query: 140 EKSQIWEVIFTGG 152
           +  QI  V+ TGG
Sbjct: 142 KNPQINNVLLTGG 154


>gi|75764491|ref|ZP_00743973.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74488018|gb|EAO51752.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 202

 Score = 66.6 bits (161), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%)

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   P +++D
Sbjct: 9   IMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAVPTFVVD 68

Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 69  APGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 108


>gi|255690900|ref|ZP_05414575.1| KamA family protein [Bacteroides finegoldii DSM 17565]
 gi|260623540|gb|EEX46411.1| KamA family protein [Bacteroides finegoldii DSM 17565]
          Length = 713

 Score = 64.3 bits (155), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 71/261 (27%), Positives = 107/261 (40%), Gaps = 65/261 (24%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEERED--------------PI 78
           TP   +L+N   +  ND   R +I     L     NI   E+ED              P 
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAEKPNAAGWLLPD 301

Query: 79  GDNNHSPLKGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKD 130
           G N H        RYP+  +L    +   C   C  C     F+ E +  +  T+   + 
Sbjct: 302 GHNIH-------RRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKES 354

Query: 131 TEAAL----AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-------------- 172
            E  L     Y +E +Q+ +++ TGGD L+  +K LQ +L  +  +              
Sbjct: 355 WERKLRRLMTYFEEDTQLRDILITGGDALMSQNKTLQHILDAVYRMAVRKQKANLDRPEG 414

Query: 173 ---KHVQILRFHSRVPIVDPQRINPELIQCLKE-------AG-KPVYIAIHANHPYEFSE 221
                +Q +R  SR+P   P RIN EL++ L+E       AG K   I  H   P E + 
Sbjct: 415 EKYAELQRVRLGSRLPAYLPMRINDELVEILREFKEKASAAGVKQFIIQTHFQTPLEVTP 474

Query: 222 EAIAAISRLANAGIILLSQSV 242
           EA  AI ++ +AG I+ +Q V
Sbjct: 475 EAKEAIRKILSAGWIITNQLV 495


>gi|167944999|ref|ZP_02532073.1| KamA family protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 107

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/105 (34%), Positives = 52/105 (49%)

Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
           E S      + +L+  GI LL+QSVLL+G+ND  E LA L     +  + PYYLH  D  
Sbjct: 2   EISAAVADGLQQLSEQGIRLLNQSVLLRGVNDSAETLAELSEQLFDAGVMPYYLHLLDRV 61

Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            G +HF L   + Q+I  +L   + G   P  + +  G   K  +
Sbjct: 62  DGAAHFELPAAKSQQIYQALLAALPGYLVPKLVREEVGAPSKTPV 106


>gi|150005257|ref|YP_001300001.1| hypothetical protein BVU_2729 [Bacteroides vulgatus ATCC 8482]
 gi|149933681|gb|ABR40379.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
          Length = 703

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 51/257 (19%)

Query: 37  IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89
           + +TP   +L+NP     +D   R +I    +L     NI   E+ED + D   +    +
Sbjct: 234 VFITPYYLSLLNPTGKGYDDEAIRSYILYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293

Query: 90  V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
           +        RYPD  +L    +   C   C  C R     S++       L  K++    
Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353

Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173
               + Y +  +Q  +++ TGGD L+  +K L+ +LK +  +                  
Sbjct: 354 LRKLMEYFENDTQFRDILITGGDALMSQNKTLRNILKAVYKMAVRKRNANLHRAEGEKYA 413

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIA 225
            +Q +R  SR+P+  P RIN EL++ L+E  +           I  H   P E + EA  
Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLEILREFKEKASAVGVSQFLIQTHFQTPLEVTPEARE 473

Query: 226 AISRLANAGIILLSQSV 242
           AI ++  AG  + +Q V
Sbjct: 474 AIRKILAAGWTITNQLV 490


>gi|254883725|ref|ZP_05256435.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|254836518|gb|EET16827.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 703

 Score = 63.2 bits (152), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)

Query: 37  IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89
           + +TP   +L+NP     +D   R +I    +L     NI   E+ED + D   +    +
Sbjct: 234 VFITPYYLSLLNPTGKGYDDEAIRSYILYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293

Query: 90  V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
           +        RYPD  +L    +   C   C  C R     S++       L  K++    
Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353

Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK----------------- 173
               + Y +  +Q+ +++ TGGD L+  +K L+ +L+ +  +                  
Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLQRAEGEKYA 413

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIA 225
            +Q +R  SR+P+  P RIN EL++ L+E  +           I  H   P E + EA  
Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLEILREFKEKASAVGVSQFLIQTHFQTPLEVTPEARE 473

Query: 226 AISRLANAGIILLSQSV 242
           AI ++  AG  + +Q V
Sbjct: 474 AIRKILAAGWTITNQLV 490


>gi|319643449|ref|ZP_07998072.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A]
 gi|317384854|gb|EFV65810.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A]
          Length = 576

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)

Query: 37  IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89
           + +TP   +L+NP     +D   R +I    +L     NI   E+ED + D   +    +
Sbjct: 107 VFITPYYLSLLNPTGKGYDDEAIRSYILYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWL 166

Query: 90  V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
           +        RYPD  +L    +   C   C  C R     S++       L  K++    
Sbjct: 167 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 226

Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK----------------- 173
               + Y +  +Q+ +++ TGGD L+  +K L+ +L+ +  +                  
Sbjct: 227 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLQRAEGEKYA 286

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIA 225
            +Q +R  SR+P+  P RIN EL++ L+E  +           I  H   P E + EA  
Sbjct: 287 ELQRVRLGSRLPVYLPMRINDELLEILREFKEKASAVGVSQFLIQTHFQTPLEVTPEARE 346

Query: 226 AISRLANAGIILLSQSV 242
           AI ++  AG  + +Q V
Sbjct: 347 AIRKILAAGWTITNQLV 363


>gi|237710948|ref|ZP_04541429.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229454792|gb|EEO60513.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 697

 Score = 62.8 bits (151), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)

Query: 37  IALTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGI 89
           + +TP   +L+NP     +D   R +I   PQ  E   NI   E+ED + D   +    +
Sbjct: 228 VFITPYYLSLLNPTGKGYDDTAIRSYILYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWL 287

Query: 90  V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
           +        RYPD  +L    +   C   C  C R     S++       L  K++    
Sbjct: 288 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 347

Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173
               + Y +  +Q+ +++ TGGD L+  +K L+ +L+ +  +                  
Sbjct: 348 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLHRAEGEKYA 407

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIA 225
            +Q +R  SR+P+  P RIN EL+  L+E          +   I  H   P E + EA  
Sbjct: 408 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVRQFLIQTHFQTPLEVTPEARE 467

Query: 226 AISRLANAGIILLSQSV 242
           AI ++  AG  + +Q V
Sbjct: 468 AIRKILAAGWTITNQLV 484


>gi|212694782|ref|ZP_03302910.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855]
 gi|212662636|gb|EEB23210.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855]
          Length = 703

 Score = 62.8 bits (151), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)

Query: 37  IALTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGI 89
           + +TP   +L+NP     +D   R +I   PQ  E   NI   E+ED + D   +    +
Sbjct: 234 VFITPYYLSLLNPTGKGYDDTAIRSYILYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293

Query: 90  V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
           +        RYPD  +L    +   C   C  C R     S++       L  K++    
Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353

Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173
               + Y +  +Q+ +++ TGGD L+  +K L+ +L+ +  +                  
Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLHRAEGEKYA 413

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIA 225
            +Q +R  SR+P+  P RIN EL+  L+E          +   I  H   P E + EA  
Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVRQFLIQTHFQTPLEVTPEARE 473

Query: 226 AISRLANAGIILLSQSV 242
           AI ++  AG  + +Q V
Sbjct: 474 AIRKILAAGWTITNQLV 490


>gi|237727246|ref|ZP_04557727.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434102|gb|EEO44179.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 703

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)

Query: 37  IALTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGI 89
           + +TP   +L+NP     +D   R +I   PQ  E   NI   E+ED + D   +    +
Sbjct: 234 VFITPYYLSLLNPTGKGYDDTAIRSYILYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293

Query: 90  V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
           +        RYPD  +L    +   C   C  C R     S++       L  K++    
Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353

Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173
               + Y +  +Q+ +++ TGGD L+  +K L+ +L+ +  +                  
Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLHRAEGEKYA 413

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIA 225
            +Q +R  SR+P+  P RIN EL+  L+E          +   I  H   P E + EA  
Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVRQFLIQTHFQTPLEVTPEARE 473

Query: 226 AISRLANAGIILLSQSV 242
           AI ++  AG  + +Q V
Sbjct: 474 AIRKILAAGWTITNQLV 490


>gi|265750535|ref|ZP_06086598.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263237431|gb|EEZ22881.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 703

 Score = 62.4 bits (150), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%)

Query: 37  IALTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGI 89
           + +TP   +L+NP     +D   R +I   PQ  E   NI   E+ED + D   +    +
Sbjct: 234 VFITPYYLSLLNPTGKGYDDTAIRSYILYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293

Query: 90  V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
           +        RYPD  +L    +   C   C  C R     S++       L  K++    
Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353

Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173
               + Y +  +Q+ +++ TGGD L+  +K L+ +L+ +  +                  
Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLQRAEGEKYA 413

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIA 225
            +Q +R  SR+P+  P RIN EL+  L+E          +   I  H   P E + EA  
Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVRQFLIQTHFQTPLEVTPEARE 473

Query: 226 AISRLANAGIILLSQSV 242
           AI ++  AG  + +Q V
Sbjct: 474 AIRKILAAGWTITNQLV 490


>gi|294777091|ref|ZP_06742548.1| KamA family protein [Bacteroides vulgatus PC510]
 gi|294448960|gb|EFG17503.1| KamA family protein [Bacteroides vulgatus PC510]
          Length = 703

 Score = 62.4 bits (150), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 51/257 (19%)

Query: 37  IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89
           + +TP   +L+NP     +D   R +I    +L     NI   E+ED + D   +    +
Sbjct: 234 VFITPYYLSLLNPTGKGYDDEAIRSYILYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293

Query: 90  V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
           +        RYPD  +L    +   C   C  C R     S++       L  K++    
Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353

Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173
               + Y +  +Q+ +++ TGGD L+  +K L+ +L+ +  +                  
Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLHRAEGEKYA 413

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIA 225
            +Q +R  SR+P+  P RIN EL+  L+E  +           I  H   P E + EA  
Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVSQFLIQTHFQTPLEVTPEARE 473

Query: 226 AISRLANAGIILLSQSV 242
           AI ++  AG  + +Q V
Sbjct: 474 AIRKILAAGWTITNQLV 490


>gi|270669603|ref|ZP_06222610.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212]
 gi|270316555|gb|EFA28395.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212]
          Length = 105

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 45/82 (54%)

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           A+ +L    + LL+QSVLL+ +NDD +IL  L     +  I PYYLH  D   G SHF +
Sbjct: 7   AMQKLNAVNVTLLNQSVLLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLI 66

Query: 286 TIEEGQKIVASLKEKISGLCQP 307
           +  E  +I  +L+   SG   P
Sbjct: 67  SDIEAMQIYKTLQSLTSGYLVP 88


>gi|10198121|gb|AAG15195.1|AF286047_3 unknown [Chlorobaculum tepidum]
          Length = 276

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 36/166 (21%)

Query: 42  VIANLINPHN-PNDPIARQFIPQKEELN------------------ILPEERE------- 75
           V  NLI+  N P+DP+ R   PQ   L+                  I+ EE         
Sbjct: 56  VAENLIDWSNIPDDPMFRLTFPQAGMLSADDYTMLSGLVASNADPSIIREEARKIQLRQN 115

Query: 76  -DPIGDN-------NHSPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTV 125
            +P G         +  P  G+ H+Y + +L   L   VC  YC +CFR       +   
Sbjct: 116 PNPAGQMELNTPWLDDEPFHGMQHKYRESVLFFPLEAQVCHAYCTYCFRWPQFSGVENLK 175

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
            ++   E  + Y+++  ++ +VIFTGGDP+++S   ++K+  T  +
Sbjct: 176 FANDSIERLVEYLEQHPEVKDVIFTGGDPMVMSTMLIKKIHATAAW 221


>gi|189467675|ref|ZP_03016460.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM
           17393]
 gi|189435939|gb|EDV04924.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM
           17393]
          Length = 697

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 107/255 (41%), Gaps = 51/255 (20%)

Query: 39  LTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL--- 86
           +TP   +L+NP +   ND   R +I   PQ  E    I   ERED +  G  N +     
Sbjct: 235 VTPYYLHLLNPGSTGYNDESLRSYILYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLP 294

Query: 87  --KGIVHRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT-----E 132
               I  RYP+  +L    +   C   C  C R     S++       L  K+T      
Sbjct: 295 DGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDSLRPKETWEKKLR 354

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
             + Y +E +Q+ +++ TGGD L+  +K L  +L+ +  +                   +
Sbjct: 355 RLMTYFEEDTQLRDILITGGDALMSQNKTLNTILEAIYRMAARKRKANQERPEGEKYAEL 414

Query: 176 QILRFHSRVPIVDPQRINPELIQCL---KEAG-----KPVYIAIHANHPYEFSEEAIAAI 227
           Q +R  SR+P   P RIN EL++ L   KE       +   I  H   P E + EA   I
Sbjct: 415 QRIRLGSRLPAYLPMRINNELVEILRTFKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGI 474

Query: 228 SRLANAGIILLSQSV 242
            +L +AG ++ +Q V
Sbjct: 475 RKLLSAGWLITNQLV 489


>gi|167624868|ref|YP_001675162.1| hypothetical protein Shal_2954 [Shewanella halifaxensis HAW-EB4]
 gi|167354890|gb|ABZ77503.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
          Length = 537

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 14/176 (7%)

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G  H+YP   L+  K    C  +C +CFR   V   +   +  KD      Y++   +
Sbjct: 202 LDGSQHKYPQCQLVFDKTTQNCFSFCTYCFRHAQVRGDEDMFIQ-KDIAQLHEYLRRHKE 260

Query: 144 IWEVIFTGGDPLILSHKRLQKVLK------TLRYIKHVQI----LRFHSRVPIVDPQRIN 193
           + +++ TGGD   +   RL++ +       +L ++K+V++    L F   + + +  +  
Sbjct: 261 VTDILITGGDGGYMPMSRLKQYVMPLIEDPSLLHVKNVRLATRALTFQPEIVLTEKYQPM 320

Query: 194 PELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN 248
            EL   +++ G  +    H + P E  +   +AAI RL N G+ + SQS ++  I+
Sbjct: 321 LELFDTMRDNGVQLAWMAHFSTPRELLNPSTLAAIRRLQNHGVNIRSQSPMMNHIS 376


>gi|224538814|ref|ZP_03679353.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519571|gb|EEF88676.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 697

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/255 (26%), Positives = 105/255 (41%), Gaps = 51/255 (20%)

Query: 39  LTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL--- 86
           +TP   +L+NP +   ND   R +I   PQ  E    I   ERED +  G  N +     
Sbjct: 235 VTPYYLHLLNPGSTGYNDESLRSYILYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLP 294

Query: 87  --KGIVHRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV---------LSSKDTE 132
               I  RYP+  +L    +   C   C  C R     S++            +  K   
Sbjct: 295 DGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDSLRPKEIWEKKLR 354

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
             + Y +E +Q+ +++ TGGD L+  +K L  +L+ +  +                   +
Sbjct: 355 RLMTYFEEDTQLRDILITGGDALMSQNKTLNTILEAVYRMAARKRKANQERPEGEKYAEL 414

Query: 176 QILRFHSRVPIVDPQRINPELIQCL---KEAG-----KPVYIAIHANHPYEFSEEAIAAI 227
           Q +R  SR+P   P RIN EL++ L   KE       +   I  H   P E + EA   I
Sbjct: 415 QRIRLGSRLPAYLPMRINNELVEILRTFKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGI 474

Query: 228 SRLANAGIILLSQSV 242
            +L +AG ++ +Q V
Sbjct: 475 RKLLSAGWLITNQLV 489


>gi|157376843|ref|YP_001475443.1| hypothetical protein Ssed_3711 [Shewanella sediminis HAW-EB3]
 gi|157319217|gb|ABV38315.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 493

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 14/176 (7%)

Query: 86  LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G  H+YP   L+  K    C  +C +CFR   V   +   +  KD      Y++   +
Sbjct: 160 LDGSQHKYPQCQLVFDKTTQNCFSFCTYCFRHAQVRGDEDMFIQ-KDIAQLHEYLRRHPE 218

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRI-----NP- 194
           + +++ TGGD   +   RL++ +  L     + HV+ +R  +R     P+ +      P 
Sbjct: 219 VTDILITGGDGGYMPVSRLRQYVMPLIEDPSLLHVKNVRLATRALTFQPEMVLTEKYEPM 278

Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIN 248
            EL   +++ G  +    H + P E  +   IAAI RL N G+ + SQS ++  I+
Sbjct: 279 LELFDTMRDNGVQLAWMAHFSTPRELLNPSTIAAIRRLQNHGVNIRSQSPMMNHIS 334


>gi|319901443|ref|YP_004161171.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108]
 gi|319416474|gb|ADV43585.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108]
          Length = 697

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGIV-- 90
           TP   +L+N  P+  +D   R +I   PQ  E    I   ERED + +   +    ++  
Sbjct: 237 TPYYLSLLNCTPNGYDDEALRSYILYSPQLVETYGQIHAWEREDIVEEGKPNAAGWLLPD 296

Query: 91  -----HRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALA- 136
                 RYP+  +L    +   C   C  C     F+ + +  +  T+   +  E  L  
Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDTLHPKESWEKKLRR 356

Query: 137 ---YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
              Y +E +Q+ +++ TGGD L+  +K L+ +L  +  +                   +Q
Sbjct: 357 LMNYFEEDAQLRDILITGGDALMSQNKTLRNILDAVYRMAARKRKANEERPEGEKYAELQ 416

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+P   P RIN EL++ LK+          +   I  H   P E + EA   I 
Sbjct: 417 RIRLGSRLPAYLPMRINDELVEILKKFKEKASTIGIRQFIIQTHFQTPLEVTPEAAKGIH 476

Query: 229 RLANAGIILLSQSV 242
           +L +AG ++ +Q V
Sbjct: 477 KLLSAGWLIDNQLV 490


>gi|325970018|ref|YP_004246209.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy]
 gi|324025256|gb|ADY12015.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy]
          Length = 710

 Score = 57.8 bits (138), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 73/326 (22%), Positives = 132/326 (40%), Gaps = 63/326 (19%)

Query: 5   HKTLTSAQDL--YNANLIKKEQIDEIKEI-SNHYSIALTPVIANLINPH------NP-ND 54
           H  + SA DL  Y A+ + ++ +  ++E  +    I  TP   +LI+        NP +D
Sbjct: 222 HFAIRSADDLNLYLAHSMDEKTLSLMREAQAKGIPIFATPYFLSLIDTRPLEKRENPRSD 281

Query: 55  PIARQFIPQKEEL-----NILPEEREDPI--GDNNHS----PLKGIVHRYPDRILL---K 100
              R ++   ++L     +I+  E+ED    G+ N +    P   +  RYP+  +     
Sbjct: 282 EAIRSYLFYSKDLVQEFGSIVAWEKEDIARPGEPNAAGWLLPSHNVHRRYPNVAIFIPDT 341

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTV------LSSKDT-----EAALAYIQEKSQIWEVIF 149
           +   C   C +C R  M   Q G        L  K +     E  + Y +    +W+++ 
Sbjct: 342 MGRACGGLCSYCQR--MYDFQGGRFNFELEKLRPKKSWQEQLEQNMEYFRNDPYLWDILI 399

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQI-----------------LRFHSRVPIVDPQRI 192
           TGGD  + S K L+ +L  +  +   +I                 +R  +++P+  PQR+
Sbjct: 400 TGGDAFMSSVKSLKNILDAVLAMARQKIEDNEARSPEEQYAPMRRVRLGTKIPVYLPQRV 459

Query: 193 NPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
             EL+Q L +  K           +  H +   E + E   A+ RL  +G  + +Q V  
Sbjct: 460 TAELVQVLADFKKKAALVGIDQCVVQTHVSSAMEITPETRKAVKRLLASGWAVTNQEVFT 519

Query: 245 KGINDDPEILANLMRTFVELRIKPYY 270
              +      A L +   ++ + PYY
Sbjct: 520 VAASRRGHS-AKLRKVLNDIGVLPYY 544


>gi|153809340|ref|ZP_01962008.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185]
 gi|149128110|gb|EDM19331.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185]
          Length = 712

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV-- 90
           TP   +L+N   +  ND   R +I     L     NI   E+ED +     +    I+  
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWILPD 301

Query: 91  -----HRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
                 RYP+  +L    +   C   C  C     F+ E +  +  T+   +  +  L  
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKESWDRKLRR 361

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
              Y +E +Q+ +++ TGGD L+  +K L+ +L+ +  +                   +Q
Sbjct: 362 LMTYFEEDTQLRDILITGGDALMSQNKTLRHILEAVYRMAVRKQRANLERPEGEKYAELQ 421

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN EL++ L+E          K   I  H   P E + EA  AI 
Sbjct: 422 RVRLGSRLLAYLPMRINDELVEILREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495


>gi|329961990|ref|ZP_08300001.1| KamA family protein [Bacteroides fluxus YIT 12057]
 gi|328530638|gb|EGF57496.1| KamA family protein [Bacteroides fluxus YIT 12057]
          Length = 698

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 44/214 (20%)

Query: 73  EREDPIGDNNHSPLKGIV-------HRYPDRILL---KLLHVCPVYCRFC-----FRREM 117
           ERED + +   +    ++        RYP+  +L    +   C   C  C     F+ + 
Sbjct: 277 EREDTVEEGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKR 336

Query: 118 VGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI- 172
           +  +  T+   +  E  L    AY +E +Q+ +++ TGGD L+  +K L+ +L  +  + 
Sbjct: 337 LNFEFDTLRPKESWEKKLRRLMAYFEEDAQLRDILITGGDALMSQNKTLRNILDAVYRMA 396

Query: 173 ----------------KHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVY 208
                             +Q +R  SR+P   P RIN EL++ L+E          +   
Sbjct: 397 SRKRKANLERPEGEKYAELQRIRLGSRLPAYLPMRINDELVEILREFKEKASTIGIRQFI 456

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           I  H   P E + EA   I +L  AG ++ +Q V
Sbjct: 457 IQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLV 490


>gi|29349882|ref|NP_813385.1| hypothetical protein BT_4474 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29341793|gb|AAO79579.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 720

 Score = 57.0 bits (136), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N   +  ND   R +I     L     NI   E+ED +  G  N +      
Sbjct: 244 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 303

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +  T+   +  ++ L  
Sbjct: 304 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRR 363

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
              Y ++ +Q+ +++ TGGD L+  +K L+ +L+ +  +                   +Q
Sbjct: 364 LMTYFEQDTQLRDILITGGDALMSQNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQ 423

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN EL+  L+E          K   I  H   P E + EA  AI 
Sbjct: 424 RVRLGSRLLAYLPMRINDELVDILREFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIR 483

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 484 KILSAGWIITNQLV 497


>gi|253569751|ref|ZP_04847160.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251840132|gb|EES68214.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 717

 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N   +  ND   R +I     L     NI   E+ED +  G  N +      
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +  T+   +  ++ L  
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRR 361

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
              Y ++ +Q+ +++ TGGD L+  +K L+ +L+ +  +                   +Q
Sbjct: 362 LMTYFEQDTQLRDILITGGDALMSQNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQ 421

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN EL+  L+E          K   I  H   P E + EA  AI 
Sbjct: 422 RVRLGSRLLAYLPMRINDELVDILREFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIR 481

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495


>gi|298384138|ref|ZP_06993699.1| KamA family protein [Bacteroides sp. 1_1_14]
 gi|298263742|gb|EFI06605.1| KamA family protein [Bacteroides sp. 1_1_14]
          Length = 718

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N   +  ND   R +I     L     NI   E+ED +  G  N +      
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +  T+   +  ++ L  
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRR 361

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
              Y ++ +Q+ +++ TGGD L+  +K L+ +L+ +  +                   +Q
Sbjct: 362 LMTYFEQDTQLRDILITGGDALMSQNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQ 421

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN EL+  L+E          K   I  H   P E + EA  AI 
Sbjct: 422 RVRLGSRLLAYLPMRINDELVDILREFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIR 481

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495


>gi|255011024|ref|ZP_05283150.1| hypothetical protein Bfra3_17927 [Bacteroides fragilis 3_1_12]
 gi|313148829|ref|ZP_07811022.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137596|gb|EFR54956.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 699

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N +    ND   R +I     L     NI   ERED +  G  N +      
Sbjct: 239 TPYYLSLLNTNGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +   +   +  +  L  
Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
              Y +E +Q+ +++ TGGD L+  +K L+ +L+ +  +                   +Q
Sbjct: 359 LMTYFEEDTQLRDILITGGDALMSQNKTLRNILEAVYRMAARKRKANQERPEGEKYAELQ 418

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN ELI+ L+E          K   I  H   P E + +   AI 
Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASAIGMKQFIIQTHFQSPLEVTPQTREAIR 478

Query: 229 RLANAGIILLSQSV 242
           ++ +AG ++ +Q V
Sbjct: 479 KILSAGWLITNQLV 492


>gi|260171420|ref|ZP_05757832.1| hypothetical protein BacD2_06100 [Bacteroides sp. D2]
          Length = 711

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N   +  ND   R +I     L     NI   E+ED +  G  N +      
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +  ++   +  +  L  
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             AY +E +Q+ +++ TGGD L+  +K LQ +L  +  +                   +Q
Sbjct: 362 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 421

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN  L+  L+E          K   I  H   P E + EA  AI 
Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495


>gi|160887264|ref|ZP_02068267.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483]
 gi|156107675|gb|EDO09420.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483]
          Length = 711

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N   +  ND   R +I     L     NI   E+ED +  G  N +      
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +  ++   +  +  L  
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             AY +E +Q+ +++ TGGD L+  +K LQ +L  +  +                   +Q
Sbjct: 362 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 421

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN  L+  L+E          K   I  H   P E + EA  AI 
Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495


>gi|293369159|ref|ZP_06615753.1| KamA family protein [Bacteroides ovatus SD CMC 3f]
 gi|292635742|gb|EFF54240.1| KamA family protein [Bacteroides ovatus SD CMC 3f]
          Length = 711

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N   +  ND   R +I     L     NI   E+ED +  G  N +      
Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +  ++   +  +  L  
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             AY +E +Q+ +++ TGGD L+  +K LQ +L  +  +                   +Q
Sbjct: 362 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 421

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN  L+  L+E          K   I  H   P E + EA  AI 
Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495


>gi|299148849|ref|ZP_07041911.1| KamA family protein [Bacteroides sp. 3_1_23]
 gi|298513610|gb|EFI37497.1| KamA family protein [Bacteroides sp. 3_1_23]
          Length = 713

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N   +  ND   R +I     L     NI   E+ED +  G  N +      
Sbjct: 244 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 303

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +  ++   +  +  L  
Sbjct: 304 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 363

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             AY +E +Q+ +++ TGGD L+  +K LQ +L  +  +                   +Q
Sbjct: 364 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 423

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN  L+  L+E          K   I  H   P E + EA  AI 
Sbjct: 424 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 483

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 484 KILSAGWIITNQLV 497


>gi|237721600|ref|ZP_04552081.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229449396|gb|EEO55187.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 713

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N   +  ND   R +I     L     NI   E+ED +  G  N +      
Sbjct: 244 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 303

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +  ++   +  +  L  
Sbjct: 304 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 363

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             AY +E +Q+ +++ TGGD L+  +K LQ +L  +  +                   +Q
Sbjct: 364 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 423

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN  L+  L+E          K   I  H   P E + EA  AI 
Sbjct: 424 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 483

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 484 KILSAGWIITNQLV 497


>gi|315919734|ref|ZP_07915974.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693609|gb|EFS30444.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 713

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N   +  ND   R +I     L     NI   E+ED +  G  N +      
Sbjct: 244 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 303

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +  ++   +  +  L  
Sbjct: 304 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 363

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             AY +E +Q+ +++ TGGD L+  +K LQ +L  +  +                   +Q
Sbjct: 364 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 423

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN  L+  L+E          K   I  H   P E + EA  AI 
Sbjct: 424 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 483

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 484 KILSAGWIITNQLV 497


>gi|291515343|emb|CBK64553.1| L-lysine 2,3-aminomutase [Alistipes shahii WAL 8301]
          Length = 699

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 44/203 (21%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSS 128
           P G N H        RYP+  +L    +   C   C  C     F+ E +  +  T+   
Sbjct: 297 PDGHNIH-------RRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPK 349

Query: 129 KDTEAALA----YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--------------- 169
           +  +  L     Y +E +Q+ +++ TGGD L+  +K L+ +L+ +               
Sbjct: 350 ESWDHKLRRLMNYFEEDTQLRDILITGGDALMSQNKTLRNILEAVCRMAGRKRRANARRP 409

Query: 170 --RYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEF 219
                  +Q +R  SR+P   P R+N EL++ L+E          K   I  H   P E 
Sbjct: 410 DGEKYAELQRVRLGSRLPAYLPMRVNDELVEILREFHEKASAVGVKQFVIQTHFQTPLEV 469

Query: 220 SEEAIAAISRLANAGIILLSQSV 242
           + EA  AI ++ +AG ++ +Q V
Sbjct: 470 TPEAEEAIRKILSAGWLITNQLV 492


>gi|298484432|ref|ZP_07002588.1| KamA family protein [Bacteroides sp. D22]
 gi|298269405|gb|EFI11010.1| KamA family protein [Bacteroides sp. D22]
          Length = 713

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEERED--PIGDNNHSPL---- 86
           TP   +L+N   +  ND   R +I     L     NI   E+ED   +G  N +      
Sbjct: 242 TPYYLSLLNITGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPD 301

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +  ++   +  +  L  
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
              Y +E +Q+ +++ TGGD L+  +K LQ +L  +  +                   +Q
Sbjct: 362 LMTYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQ 421

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN  L+  L+E          K   I  H   P E + EA  AI 
Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDILREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495


>gi|237715748|ref|ZP_04546229.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408756|ref|ZP_06085302.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294644787|ref|ZP_06722531.1| KamA family protein [Bacteroides ovatus SD CC 2a]
 gi|294806062|ref|ZP_06764919.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b]
 gi|229444457|gb|EEO50248.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262353621|gb|EEZ02715.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292639865|gb|EFF58139.1| KamA family protein [Bacteroides ovatus SD CC 2a]
 gi|294446730|gb|EFG15340.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 712

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEERED--PIGDNNHSPL---- 86
           TP   +L+N   +  ND   R +I     L     NI   E+ED   +G  N +      
Sbjct: 242 TPYYLSLLNITGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPD 301

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +  ++   +  +  L  
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
              Y +E +Q+ +++ TGGD L+  +K LQ +L  +  +                   +Q
Sbjct: 362 LMTYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQ 421

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN  L+  L+E          K   I  H   P E + EA  AI 
Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDILREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495


>gi|167763257|ref|ZP_02435384.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC
           43183]
 gi|167698551|gb|EDS15130.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC
           43183]
          Length = 699

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 100/254 (39%), Gaps = 51/254 (20%)

Query: 40  TPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N      ND   R +I   PQ  E    I   ERED +  G  N +      
Sbjct: 237 TPYYLSLLNCTGSGYNDDSLRSYILYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPD 296

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV---------LSSKDTEA 133
              I  RYP+  +L    +   C   C  C R     S++               K    
Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFEELHPKESWDKKLRR 356

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
            + Y +E +Q+ +++ TGGD L+  +K L+ +L  +  +                   +Q
Sbjct: 357 LMTYFEEDTQLRDILITGGDALMSQNKTLRNILDAVYRMAVRKRKANQERPEGEKYAELQ 416

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+P   P RIN EL+  L+E          +   I  H   P E + EA   I 
Sbjct: 417 RIRLGSRLPAYLPMRINDELVDILREFKEKASTVGIRQFIIQTHFQTPLEVTPEAEEGIR 476

Query: 229 RLANAGIILLSQSV 242
           +L +AG ++ +Q V
Sbjct: 477 KLLSAGWLITNQLV 490


>gi|71277819|ref|YP_270271.1| hypothetical protein CPS_3603 [Colwellia psychrerythraea 34H]
 gi|71143559|gb|AAZ24032.1| conserved domain protein [Colwellia psychrerythraea 34H]
          Length = 555

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 14/176 (7%)

Query: 86  LKGIVHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G  H+YP    I  K    C  +C +CFR   V   +   +  K+ +    Y++   +
Sbjct: 221 LDGSQHKYPQCQLIFDKTTQNCFSFCTYCFRHAQVRGDEDMFIQ-KEIDQIHRYLKVHEE 279

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINPE----- 195
           + +++ TGGD   +   R ++ +  L   R + H++ +R  +R     P+ I        
Sbjct: 280 VTDMLITGGDGGYMPASRFEQYVTPLLEDRDLLHIKTVRLATRALTFQPEMILSSKYDKM 339

Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIN 248
             +   + + G  +    H + P E  +   IAAI RL   G+++ SQS ++  I+
Sbjct: 340 LAVFDKMHDNGIQLAWMAHFSTPRELLNPTTIAAIRRLQRHGVVIRSQSPMMNHIS 395


>gi|295087042|emb|CBK68565.1| L-lysine 2,3-aminomutase [Bacteroides xylanisolvens XB1A]
          Length = 713

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEERED--PIGDNNHSPL---- 86
           TP   +L+N   +  ND   R +I     L     NI   E+ED   +G  N +      
Sbjct: 242 TPYYLSLLNITGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPD 301

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +  ++   +  +  L  
Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
              Y +E +Q+ +++ TGGD L+  +K LQ +L  +  +                   +Q
Sbjct: 362 LMTYFEEDTQLRDILITGGDALMSQNKTLQHILDAVYRMAVRKQKANLERPEGEKYAELQ 421

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN  L+  L+E          K   I  H   P E + EA  AI 
Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDILREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481

Query: 229 RLANAGIILLSQSV 242
           ++ +AG I+ +Q V
Sbjct: 482 KILSAGWIITNQLV 495


>gi|226327320|ref|ZP_03802838.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198]
 gi|225204538|gb|EEG86892.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198]
          Length = 153

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 5/91 (5%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +PNDP+  Q +    E  I P    DP+ D   + + G++H+Y +R LL +   C V CR
Sbjct: 67  DPNDPLLLQVLTANAEFTITPGFSTDPL-DEQQNAVPGLLHKYQNRALLLVKGGCAVNCR 125

Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQE 140
           +CFRR       KG   +  + + A+ YI++
Sbjct: 126 YCFRRHFPYEDNKG---NKANWQKAIEYIKK 153


>gi|163784748|ref|ZP_02179553.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879982|gb|EDP73681.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 250

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 13/197 (6%)

Query: 154 PLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EA 203
           PLI+    L++ ++ +    I H++ +R  ++     P R        EL+   K   + 
Sbjct: 1   PLIMKTHVLKQYIEPILEANIPHLKTIRIGTKALGFWPYRFLTDNDAQELLDLFKKIVDK 60

Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           G  +    H NH  E  ++E   A+ ++   G ++ +QS +L+ IND+P++ A + +  V
Sbjct: 61  GYHLAYMAHFNHYKELETDEVKEAVQKIRETGAVIRTQSPILRHINDNPDVWAKMWKEQV 120

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           +  + PYY+          +F + I    +I     +K+SGL +      +    GK++I
Sbjct: 121 KQGMIPYYMFMARDTGAQHYFGVPIVRAWEIFREAYQKVSGLARTVKGPSMSATPGKIRI 180

Query: 323 DTHNIKKVGNGSYCITD 339
               + ++    Y + D
Sbjct: 181 --LGVSEINGKKYIVLD 195


>gi|60682845|ref|YP_212989.1| hypothetical protein BF3383 [Bacteroides fragilis NCTC 9343]
 gi|60494279|emb|CAH09074.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
          Length = 699

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N      ND   R +I     L     NI   ERED +  G  N +      
Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +   +   +  +  L  
Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             +Y +E +Q+ +++ TGGD L+  +K L+ +L+ +  +                   +Q
Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN ELI+ L+E          K   I  H   P E +     AI 
Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIR 478

Query: 229 RLANAGIILLSQSV 242
           ++ +AG ++ +Q V
Sbjct: 479 KILSAGWLITNQLV 492


>gi|53714863|ref|YP_100855.1| hypothetical protein BF3578 [Bacteroides fragilis YCH46]
 gi|52217728|dbj|BAD50321.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 699

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N      ND   R +I     L     NI   ERED +  G  N +      
Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +   +   +  +  L  
Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             +Y +E +Q+ +++ TGGD L+  +K L+ +L+ +  +                   +Q
Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN ELI+ L+E          K   I  H   P E +     AI 
Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIR 478

Query: 229 RLANAGIILLSQSV 242
           ++ +AG ++ +Q V
Sbjct: 479 KILSAGWLITNQLV 492


>gi|301164314|emb|CBW23872.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 699

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N      ND   R +I     L     NI   ERED +  G  N +      
Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +   +   +  +  L  
Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             +Y +E +Q+ +++ TGGD L+  +K L+ +L+ +  +                   +Q
Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN ELI+ L+E          K   I  H   P E +     AI 
Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIR 478

Query: 229 RLANAGIILLSQSV 242
           ++ +AG ++ +Q V
Sbjct: 479 KILSAGWLITNQLV 492


>gi|265766723|ref|ZP_06094552.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263253100|gb|EEZ24576.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 699

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N      ND   R +I     L     NI   ERED +  G  N +      
Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +   +   +  +  L  
Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             +Y +E +Q+ +++ TGGD L+  +K L+ +L+ +  +                   +Q
Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN ELI+ L+E          K   I  H   P E +     AI 
Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIR 478

Query: 229 RLANAGIILLSQSV 242
           ++ +AG ++ +Q V
Sbjct: 479 KILSAGWLITNQLV 492


>gi|253565968|ref|ZP_04843422.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945072|gb|EES85510.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 699

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N      ND   R +I     L     NI   ERED +  G  N +      
Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ E +  +   +   +  +  L  
Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             +Y +E +Q+ +++ TGGD L+  +K L+ +L+ +  +                   +Q
Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+    P RIN ELI+ L+E          K   I  H   P E +     AI 
Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIR 478

Query: 229 RLANAGIILLSQSV 242
           ++ +AG ++ +Q V
Sbjct: 479 KILSAGWLITNQLV 492


>gi|229004623|ref|ZP_04162361.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
 gi|228756664|gb|EEM05971.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
          Length = 233

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%)

Query: 174 HVQILRFHSRVPIVDPQRI-----NPELIQCLK---EAGKPVYIAIHANHPYEFSEEAI- 224
           H++ +R  ++     P R      + EL+Q  K   ++GK + I  H  H  E       
Sbjct: 22  HIRNIRIGTKALTYWPNRFISDSDSEELLQFFKKIIDSGKSLAIMAHFTHWRELEAPLTQ 81

Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
            AI ++ + G I+ SQS ++  IN++PE    L    V+L I PYY+          +F+
Sbjct: 82  VAIKKIRDVGAIIRSQSPIIGHINNNPETWKILWEKQVQLGIIPYYMFVERDTGSNRYFQ 141

Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           + + E   I      ++SGL +      +   YGK+++
Sbjct: 142 VPLIEAYNIYRDAISRVSGLARTARGPVMSTTYGKIEV 179


>gi|317479408|ref|ZP_07938542.1| KamA family protein [Bacteroides sp. 4_1_36]
 gi|316904482|gb|EFV26302.1| KamA family protein [Bacteroides sp. 4_1_36]
          Length = 698

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N      +D   R +I   PQ  E    I   ERED +  G  N +      
Sbjct: 237 TPYYLSLLNCTGSGYDDEALRSYILYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPD 296

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ + +  +  T+   +  E  L  
Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRR 356

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             AY +E +Q+ +++ TGGD L+  +K L  +L  +  +                   +Q
Sbjct: 357 LMAYFEEDTQLRDILITGGDALMSQNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQ 416

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+P   P RIN  L++ L+E          +   I  H   P E + EA   I 
Sbjct: 417 RVRLGSRLPAYLPMRINDGLVEILREFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIR 476

Query: 229 RLANAGIILLSQSV 242
           +L  AG ++ +Q V
Sbjct: 477 KLLAAGWLIDNQLV 490


>gi|160888851|ref|ZP_02069854.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492]
 gi|156861750|gb|EDO55181.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492]
          Length = 698

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N      +D   R +I   PQ  E    I   ERED +  G  N +      
Sbjct: 237 TPYYLSLLNCTGSGYDDEALRSYILYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPD 296

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135
              I  RYP+  +L    +   C   C  C     F+ + +  +  T+   +  E  L  
Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRR 356

Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
             AY +E +Q+ +++ TGGD L+  +K L  +L  +  +                   +Q
Sbjct: 357 LMAYFEEDTQLRDILITGGDALMSQNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQ 416

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--------IAIHANHPYEFSEEAIAAIS 228
            +R  SR+P   P RIN  L++ L+E  +           I  H   P E + EA   I 
Sbjct: 417 RVRLGSRLPAYLPMRINDGLVEILREFKEKASTIGIHQFIIQTHFQTPLEVTPEAAEGIR 476

Query: 229 RLANAGIILLSQSV 242
           +L  AG ++ +Q V
Sbjct: 477 KLLAAGWLIDNQLV 490


>gi|313158793|gb|EFR58178.1| KamA family protein [Alistipes sp. HGB5]
          Length = 698

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 25/133 (18%)

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQI 177
           + Y +E +Q+ +++ TGGD L+  +K L  +L+ +  +                   +Q 
Sbjct: 359 MTYFEEDTQLRDILITGGDALMSQNKTLHNILEAVYRMACRKRKANAGRPDGEKYAELQR 418

Query: 178 LRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAISR 229
           +R  SR+P   P RI+  L++ L+E          +   I  H   P E + EA  AI R
Sbjct: 419 VRLGSRLPAYLPMRIDDGLVEVLREFKQKASAVGVRQFIIQTHFQSPLEVTPEAQEAIRR 478

Query: 230 LANAGIILLSQSV 242
           +  AG ++ +Q V
Sbjct: 479 ILAAGWLVTNQLV 491


>gi|58426923|gb|AAW75960.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 237

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 34/63 (53%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP+ RQ +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+C
Sbjct: 75  HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 134

Query: 113 FRR 115
           FRR
Sbjct: 135 FRR 137


>gi|270293625|ref|ZP_06199827.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275092|gb|EFA20952.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 698

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 64/254 (25%), Positives = 102/254 (40%), Gaps = 51/254 (20%)

Query: 40  TPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL---- 86
           TP   +L+N      +D   R +I   PQ  E    I   ERED +  G  N +      
Sbjct: 237 TPYYLSLLNCTGSGYDDEALRSYILYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPD 296

Query: 87  -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALA- 136
              I  RYP+  +L    +   C   C  C     F+ + +  +  T+   +  E  L  
Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRR 356

Query: 137 ---YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176
              Y +E +Q+ +++ TGGD L+  +K L  +L  +  +                   +Q
Sbjct: 357 LMDYFEEDTQLRDILITGGDALMSQNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQ 416

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYIAIHANHPYEFSEEAIAAIS 228
            +R  SR+P   P RIN  L++ L+E          +   I  H   P E + EA   I 
Sbjct: 417 RVRLGSRLPAYLPMRINDGLVEILREFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIR 476

Query: 229 RLANAGIILLSQSV 242
           +L  AG ++ +Q V
Sbjct: 477 KLLAAGWLIDNQLV 490


>gi|332877293|ref|ZP_08445041.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684676|gb|EGJ57525.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 707

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 51/257 (19%)

Query: 37  IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89
           + +TP   +L+NP     +D   R ++     L      I   ERED + +   +    +
Sbjct: 233 VFVTPYYLSLLNPTGKGYDDAAIRSYVIYSSRLVETFGGIRAWEREDIVEEGKPNVAGWL 292

Query: 90  V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
           +        RYP+  +L    +   C   C  C R     S++       L  K+     
Sbjct: 293 LPGGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSRRLNFELEKLKPKENWNTR 352

Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL-----------------RYIK 173
               + Y +  +QI +++ TGGD L+  +  L+ +L  +                     
Sbjct: 353 LRKLMDYFEHDTQIRDILITGGDALMSRNATLRNILDAVCKMAVRKRQANLSRPDGEKYA 412

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLK-------EAG-KPVYIAIHANHPYEFSEEAIA 225
            +Q +R  +R+P+  P R++ EL+  L+       EAG   +++  H   P E + E+  
Sbjct: 413 ELQRVRLGTRLPVYLPMRVDDELLDILRDFRQKAAEAGITQLFVQTHFQSPLEVTPESRE 472

Query: 226 AISRLANAGIILLSQSV 242
           AI R+ + G  + +Q V
Sbjct: 473 AIRRILSTGWAVTNQLV 489


>gi|301310737|ref|ZP_07216676.1| KamA family protein [Bacteroides sp. 20_3]
 gi|300832311|gb|EFK62942.1| KamA family protein [Bacteroides sp. 20_3]
          Length = 704

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 51/255 (20%)

Query: 39  LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90
           +TP   +L+N  +   +D   R +I    EL     +I   E+ED +  +  +    ++ 
Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303

Query: 91  ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132
                  RYP+  +L    +   C   C  C R     S++      VL  K++      
Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEVLKPKESWDRKLR 363

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
             + Y +E +Q+ +++ TGGD L+  +  L+K+L+ +  +                   +
Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRPEGEKYAEL 423

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227
           Q +R  SR+    P R+  EL+  L+E  +          YI  H   P E + EA  AI
Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483

Query: 228 SRLANAGIILLSQSV 242
             +  AG  + +Q V
Sbjct: 484 EAILAAGWTITNQLV 498


>gi|330995846|ref|ZP_08319742.1| KamA family protein [Paraprevotella xylaniphila YIT 11841]
 gi|329574377|gb|EGG55948.1| KamA family protein [Paraprevotella xylaniphila YIT 11841]
          Length = 707

 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 51/257 (19%)

Query: 37  IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89
           + +TP   +L+NP     +D   R ++     L      I   ERED + +   +    +
Sbjct: 233 VFVTPYYLSLLNPTGKGYDDAAIRSYVIYSSRLVETFGGIRAWEREDIVEEGKPNVAGWL 292

Query: 90  V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131
           +        RYP+  +L    +   C   C  C R     S++       L  K+     
Sbjct: 293 LPGGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSRRLNFELEKLKPKENWNTR 352

Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL-----------------RYIK 173
               + Y +  +QI +++ TGGD L+  +  L+ +L  +                     
Sbjct: 353 LRKLMDYFEHDTQIRDILITGGDALMSRNATLRNILDAVCKMAVRKRQANLSRPDGEKYA 412

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLK-------EAG-KPVYIAIHANHPYEFSEEAIA 225
            +Q +R  +R+P+  P R++ EL+  L+       EAG   +++  H   P E + E+  
Sbjct: 413 ELQRVRLGTRLPVYLPMRVDDELLDILRDFRQKAAEAGITQLFVQTHFQSPLEVTPESRE 472

Query: 226 AISRLANAGIILLSQSV 242
           AI R+ + G  + +Q V
Sbjct: 473 AIRRILSTGWAVTNQLV 489


>gi|255281034|ref|ZP_05345589.1| PDZ domain protein [Bryantella formatexigens DSM 14469]
 gi|255268482|gb|EET61687.1| PDZ domain protein [Bryantella formatexigens DSM 14469]
          Length = 456

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 39/182 (21%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
           H C   C FCF  +M    + T L  KD +  L+++Q            G+ + L++   
Sbjct: 89  HSCRNRCIFCFIDQMPPGMRKT-LYFKDDDTRLSFLQ------------GNYVTLTN--- 132

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
                 +  +   QILR+H     +  Q +NP+L +C K  G              F+ E
Sbjct: 133 ------IGEMDMEQILRYHLSPINISFQTMNPQL-RC-KMLGN------------RFAGE 172

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
           A+  + RLA AGI +  Q VL KG+ND  E+  ++ +     R  PY      +  G + 
Sbjct: 173 ALKKVDRLAEAGIEMNGQIVLCKGVNDGEELEYSIRQL---TRYLPYLRSVSVVPVGLTR 229

Query: 283 FR 284
           FR
Sbjct: 230 FR 231


>gi|298375250|ref|ZP_06985207.1| KamA family protein [Bacteroides sp. 3_1_19]
 gi|298267750|gb|EFI09406.1| KamA family protein [Bacteroides sp. 3_1_19]
          Length = 704

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%)

Query: 39  LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90
           +TP   +L+N  +   +D   R +I    EL     +I   E+ED +  +  +    ++ 
Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303

Query: 91  ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132
                  RYP+  +L    +   C   C  C R     S++       L  K++      
Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 363

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
             + Y +E +Q+ +++ TGGD L+  +  L+K+L+ +  +                   +
Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRSEGEKYAEL 423

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227
           Q +R  SR+    P R+  EL+  L+E  +          YI  H   P E + EA  AI
Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483

Query: 228 SRLANAGIILLSQSV 242
             +  AG  + +Q V
Sbjct: 484 EAILAAGWTITNQLV 498


>gi|150007262|ref|YP_001302005.1| hypothetical protein BDI_0607 [Parabacteroides distasonis ATCC
           8503]
 gi|149935686|gb|ABR42383.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 704

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%)

Query: 39  LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90
           +TP   +L+N  +   +D   R +I    EL     +I   E+ED +  +  +    ++ 
Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303

Query: 91  ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132
                  RYP+  +L    +   C   C  C R     S++       L  K++      
Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 363

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
             + Y +E +Q+ +++ TGGD L+  +  L+K+L+ +  +                   +
Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRPEGEKYAEL 423

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227
           Q +R  SR+    P R+  EL+  L+E  +          YI  H   P E + EA  AI
Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483

Query: 228 SRLANAGIILLSQSV 242
             +  AG  + +Q V
Sbjct: 484 EAILAAGWTITNQLV 498


>gi|256839551|ref|ZP_05545060.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256738481|gb|EEU51806.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 704

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%)

Query: 39  LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90
           +TP   +L+N  +   +D   R +I    EL     +I   E+ED +  +  +    ++ 
Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303

Query: 91  ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132
                  RYP+  +L    +   C   C  C R     S++       L  K++      
Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 363

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
             + Y +E +Q+ +++ TGGD L+  +  L+K+L+ +  +                   +
Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRSEGEKYAEL 423

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227
           Q +R  SR+    P R+  EL+  L+E  +          YI  H   P E + EA  AI
Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483

Query: 228 SRLANAGIILLSQSV 242
             +  AG  + +Q V
Sbjct: 484 EAILAAGWTITNQLV 498


>gi|262382166|ref|ZP_06075304.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262297343|gb|EEY85273.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 704

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%)

Query: 39  LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90
           +TP   +L+N  +   +D   R +I    EL     +I   E+ED +  +  +    ++ 
Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303

Query: 91  ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132
                  RYP+  +L    +   C   C  C R     S++       L  K++      
Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 363

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
             + Y +E +Q+ +++ TGGD L+  +  L+K+L+ +  +                   +
Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRPEGEKYAEL 423

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227
           Q +R  SR+    P R+  EL+  L+E  +          YI  H   P E + EA  AI
Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483

Query: 228 SRLANAGIILLSQSV 242
             +  AG  + +Q V
Sbjct: 484 EAILAAGWTITNQLV 498


>gi|255014113|ref|ZP_05286239.1| hypothetical protein B2_09392 [Bacteroides sp. 2_1_7]
          Length = 706

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%)

Query: 39  LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90
           +TP   +L+N  +   +D   R +I    EL     +I   E+ED +  +  +    ++ 
Sbjct: 246 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 305

Query: 91  ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132
                  RYP+  +L    +   C   C  C R     S++       L  K++      
Sbjct: 306 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 365

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
             + Y +E +Q+ +++ TGGD L+  +  L+K+L+ +  +                   +
Sbjct: 366 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRPEGEKYAEL 425

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227
           Q +R  SR+    P R+  EL+  L+E  +          YI  H   P E + EA  AI
Sbjct: 426 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 485

Query: 228 SRLANAGIILLSQSV 242
             +  AG  + +Q V
Sbjct: 486 EAILAAGWTITNQLV 500


>gi|154492755|ref|ZP_02032381.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC
           43184]
 gi|154087060|gb|EDN86105.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC
           43184]
          Length = 703

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 101/255 (39%), Gaps = 51/255 (20%)

Query: 39  LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL--- 86
           +TP   +L+N +    +D   R +I   EEL      I   E+ED +  G  N +     
Sbjct: 243 VTPYYLSLLNTNTSGYDDATIRSYILYSEELVDTYGRIKAWEKEDIVVSGQPNAAGWLLP 302

Query: 87  --KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVG----SQKGTVLSSKDTE 132
               I  RYP+  +L    +   C   C  C     F+ E +     S K      K   
Sbjct: 303 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFESLKPKETWDKKLR 362

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
             + Y +E +Q+ +++ TGGD L+  +  L+ +L  +  +                   +
Sbjct: 363 RLMRYFEEDAQLRDILITGGDALMSQNATLRNILDAVYKMAVRKRKANESRPEGEKYAEL 422

Query: 176 QILRFHSRVPIVDPQRINPELIQCLK-------EAGKPVY-IAIHANHPYEFSEEAIAAI 227
           Q +R  SR+    P RI  EL+  L+         G   + I  H   P E + EA  AI
Sbjct: 423 QRVRLGSRLLAYLPLRITDELVGILRSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAI 482

Query: 228 SRLANAGIILLSQSV 242
             + +AG I+ +Q V
Sbjct: 483 EAILSAGWIITNQLV 497


>gi|218260892|ref|ZP_03475966.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224314|gb|EEC96964.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii
           DSM 18315]
          Length = 703

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 63/255 (24%), Positives = 100/255 (39%), Gaps = 51/255 (20%)

Query: 39  LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL--- 86
           +TP   +L+N +    +D   R +I   EEL      I   E+ED +  G  N +     
Sbjct: 243 VTPYYLSLLNTNTSGYDDATIRSYILYSEELVDTYGRIKAWEKEDIVVSGQPNAAGWLLP 302

Query: 87  --KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVG----SQKGTVLSSKDTE 132
               I  RYP+  +L    +   C   C  C     F+ E +     S K      K   
Sbjct: 303 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFESLKPKEAWDKKLR 362

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175
             + Y +E +Q+ +++ TGGD L+  +  L  +L  +  +                   +
Sbjct: 363 RLMRYFEEDAQLRDILITGGDALMSQNATLCNILDAVYKMAVRKRKANESRPKGEKYAEL 422

Query: 176 QILRFHSRVPIVDPQRINPELIQCLK-------EAGKPVY-IAIHANHPYEFSEEAIAAI 227
           Q +R  SR+    P RI  EL+  L+         G   + I  H   P E + EA  AI
Sbjct: 423 QRVRLGSRLLAYLPLRITDELVDILRSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAI 482

Query: 228 SRLANAGIILLSQSV 242
             + +AG I+ +Q V
Sbjct: 483 EAILSAGWIITNQMV 497


>gi|312129610|ref|YP_003996950.1| oxygeN-independent coproporphyrinogen iii oxidase [Leadbetterella
           byssophila DSM 17132]
 gi|311906156|gb|ADQ16597.1| oxygen-independent coproporphyrinogen III oxidase [Leadbetterella
           byssophila DSM 17132]
          Length = 376

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 108 YCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
           YC F F  ++    K      K+ E   +Y+ EK+ +  + F GG P +LS+  L+KVLK
Sbjct: 16  YCDFHFSTQLSYKAKMVDAMCKEIELNSSYLVEKN-LETLYFGGGTPSLLSNSELEKVLK 74

Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           +++Y  H  +          +P  I+P+ +Q  KE G
Sbjct: 75  SIQY--HYSLENIKEFTLEANPDDIHPDRLQLWKELG 109


>gi|154308719|ref|XP_001553695.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10]
 gi|150852733|gb|EDN27925.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10]
          Length = 309

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 4/85 (4%)

Query: 19  LIKKEQIDEIKEISN--HYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEER 74
           + +++ I+++KE       SI L P + ++I+  NP  DPI RQFIP K  +L   P+  
Sbjct: 213 VTREDFIEDVKEGIKLAPMSIRLPPHVLSIIDWENPFEDPIRRQFIPMKSSKLEDHPKVE 272

Query: 75  EDPIGDNNHSPLKGIVHRYPDRILL 99
            D + +++ SP++G VHRY D+ L 
Sbjct: 273 LDSLHESDDSPVEGFVHRYYDKALF 297


>gi|213859667|ref|ZP_03385371.1| hypothetical protein SentesT_25317 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 81

 Score = 46.2 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
           ++E  I P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++  
Sbjct: 2   QDEFVIAPGFSTDPL-EEQHSVVSGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQ 60

Query: 124 TVLSSKDTEAALAYIQEKSQIWE 146
              + ++ + AL Y+    ++ E
Sbjct: 61  G--NKRNWQTALEYVAAHPELDE 81


>gi|126458652|ref|YP_001054930.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM
           11548]
 gi|126248373|gb|ABO07464.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM
           11548]
          Length = 309

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 32/186 (17%)

Query: 96  RILLKLLHV----CPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQIWEVIF 149
           R  LK+ +V    C   C FC      G Q+  G+ L+++D E A +Y+  K  +++   
Sbjct: 8   RPFLKMRYVVDDECNYNCLFC---HFEGQQRRQGSTLTAEDYEFA-SYVFSKLGVYDFKL 63

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
           TGG+PL+   + + K+++ +  +         + V I     +    +  L +AG + + 
Sbjct: 64  TGGEPLL--RRDIDKIVEAIARV---------AAVSITTNGLLLRRWVDRLYKAGLRKIN 112

Query: 209 IAIHANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
           ++IH   P ++S+          E +  +    N G+ +   +V+L+GIN D + +  L+
Sbjct: 113 VSIHTADPEKYSKVVGAPTWAFKEVLRGLQESRNRGLAIKLNAVVLRGINTDDKSVKELV 172

Query: 259 RTFVEL 264
           +    L
Sbjct: 173 KLAASL 178


>gi|328884100|emb|CCA57339.1| Lysine 2,3-aminomutase [Streptomyces venezuelae ATCC 10712]
          Length = 431

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 62/272 (22%), Positives = 102/272 (37%), Gaps = 33/272 (12%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
            ER DP      +   G+ HRYP+ +L+       C   C  C R               
Sbjct: 95  RERLDPHPAGRDA--AGLRHRYPETLLVLPGQGRTCHGPCASCSRWPRFAGDPVRGRELG 152

Query: 130 DTEAALAYIQEKSQIWEVIFTG-----GDPLILSHKRLQKVLKTLRYIKHVQIL------ 178
             EA    +    +I +V+F G     G             L+T R   +V  L      
Sbjct: 153 GPEALGDRLDRHPEITDVLFAGVPFAGGSGADPPDPPDPFELRTARLAPYVTALLDRPGV 212

Query: 179 -------RFHSRVP--IVDPQRINPELIQCLKE---AGKPVYIAIHANHPYEFS-EEAIA 225
                  R  SR P   +D    + +L++ L+    +G+ + + ++  HP E     A  
Sbjct: 213 RTVRIVTRAVSRFPGRFLDAPDAD-DLLRLLERVVASGRHLVLTLYVCHPRELRPATARR 271

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           A+ RLA  G +L ++  +L+ +NDD  + A + R    L + PY +           FRL
Sbjct: 272 ALGRLAATGAVLRTRGAVLRRVNDDAALWARMWREQTALGLAPYGMLVERGGGVRRCFRL 331

Query: 286 TIEEGQKIVASLKEKISGL----CQPFYILDL 313
            +    ++ A    ++ GL    C P    +L
Sbjct: 332 PLARVLEVHAEALRRVPGLAGRVCGPVMPTEL 363


>gi|40217429|emb|CAE46362.1| hypothetical protein C2_0004 [uncultured archaeon]
 gi|268323812|emb|CBH37400.1| hypothetical protein, radical SAM superfamily [uncultured archaeon]
          Length = 317

 Score = 44.7 bits (104), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 26/209 (12%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQI-WEVIFTGGDPLIL 157
           +L  C  +CR CFR    G   GT+LS ++T   A  A ++   ++  + + TGG+P  L
Sbjct: 21  MLTGCDFHCRGCFRPARDGG--GTLLSPEETLKRAEQACLKHYGKLPTKAMITGGEP-TL 77

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYI 209
             + L  ++K L      +I+   +   I   +  N      LKEAG        K    
Sbjct: 78  DKEFLLTLVKGLEEKGFEEIILMSNGYEI--GREGNGNYAAELKEAGLTEAHIDIKAFSD 135

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVE 263
            IH  +  + ++  + A+  L + G+ LL Q+V + GI D  EI      L+N+  + ++
Sbjct: 136 EIHIWYTGKSNKPVLNAVRMLNDTGMELLIQTVYMPGIVDVEEIEQIAIFLSNV-NSNIK 194

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           LRI P+    P  A      R TIE+ ++
Sbjct: 195 LRINPF---APTFAFERVTERPTIEDMER 220


>gi|148270145|ref|YP_001244605.1| ribosomal RNA large subunit methyltransferase N [Thermotoga
           petrophila RKU-1]
 gi|281412513|ref|YP_003346592.1| radical SAM enzyme, Cfr family [Thermotoga naphthophila RKU-10]
 gi|205829917|sp|A5ILF6|RLMN_THEP1 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|147735689|gb|ABQ47029.1| radical SAM enzyme, Cfr family [Thermotoga petrophila RKU-1]
 gi|281373616|gb|ADA67178.1| radical SAM enzyme, Cfr family [Thermotoga naphthophila RKU-10]
          Length = 343

 Score = 44.3 bits (103), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 43/213 (20%)

Query: 82  NHSPLKGIVHRYPDRIL--LKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEA 133
           + + ++ ++  +PDRI   +     CPV C FC      F R +   +    + S + E 
Sbjct: 86  DGNTIESVMLFHPDRITACISTQVGCPVKCIFCATGMSGFVRNLTTGEIVAQILSMEKE- 144

Query: 134 ALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
                 EK +I  V++ G G+PL+      +  +K++R + H ++     R   +    I
Sbjct: 145 ------EKKKIGNVVYMGMGEPLL----NYENTIKSIRTLNHKKMGNIGIRRITISTVGI 194

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA------AISRLANA--------GIILL 238
              +IQ L E G  V +A+  + P  F  + +       +I  + NA        G  + 
Sbjct: 195 PDRIIQ-LAEEGLDVKLALSLHAPTNFKRDQLVPLNKKYSIEEILNAVKIYQKKTGNRVT 253

Query: 239 SQSVLLKGINDD-------PEILANLMRTFVEL 264
            + VL+KG+ND+        EIL N M+ FV L
Sbjct: 254 IEYVLIKGMNDEISDAKKLAEILKN-MKVFVNL 285


>gi|257063684|ref|YP_003143356.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
 gi|256791337|gb|ACV22007.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
          Length = 457

 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 90/244 (36%), Gaps = 45/244 (18%)

Query: 24  QIDEIKEISNHYSIALTP-VIANLINPHNPNDPIARQFIPQKEELNI----LPEEREDPI 78
           +I E++E S  +     P  I   +N H   D I  Q+     E+ +    L  +    +
Sbjct: 20  RILEVEEYSPAFDAGFEPGCIVTAVNGHPLRDMIDWQWYSDGYEVELSYIDLDGDEGTVV 79

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
            +       GI     D  +   + VC   C FCF R M+  +    L  +D +  L+++
Sbjct: 80  LEREEGESWGITF---DGAIFDGIRVCRNACMFCFMR-MLPKESRDTLMLRDDDWRLSFL 135

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           Q         FT               L  L      +I   H     V P R++   + 
Sbjct: 136 QGN-------FT--------------TLTNLSEEDADEITERH-----VSPLRVS---LH 166

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
           C+    +   I  HA+H        +  + +L   GI L  Q VLL G+ND  E++  L 
Sbjct: 167 CISPEVRSKMIGRHADH-------GVRMMEKLLAGGIELYMQIVLLPGVNDGAELMKTLA 219

Query: 259 RTFV 262
             ++
Sbjct: 220 WAYL 223


>gi|15607116|ref|NP_214498.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5]
 gi|7674126|sp|O67929|MOAA_AQUAE RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|2984358|gb|AAC07877.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5]
          Length = 320

 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 23/192 (11%)

Query: 99  LKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C + C FC    +E     K  +L+ ++ E  +  I  K  + +V  TGG+PL+
Sbjct: 15  ISLTDRCNLRCNFCMPPGKEYNFLPKRQLLTPEEIEEYVK-IFAKLGVEKVRLTGGEPLL 73

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANH 215
              + L+++++ +  ++ ++ +   +    +       E ++ LKEAG K + +++H+ +
Sbjct: 74  --REDLEEIIQRISKVEGIKDIALTTNGVFL------KERLKALKEAGLKRITVSVHSLN 125

Query: 216 PYEFSE---------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
           P +  +         E    I R    G  +   SV++KG NDD EIL +L R F  L +
Sbjct: 126 PEKNQKLVNRSVNLGEVFEVIIRAKELGFKVKVNSVIIKGFNDD-EIL-DLARFFKNLGV 183

Query: 267 KPYYLHHPDLAA 278
              ++ + D+  
Sbjct: 184 TLRFIEYMDVGT 195


>gi|255568836|ref|XP_002525389.1| catalytic, putative [Ricinus communis]
 gi|223535352|gb|EEF37027.1| catalytic, putative [Ricinus communis]
          Length = 861

 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 27/176 (15%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161
           C + C+FC+   M   +  T     D    A      +   I  V+F G G+PL    + 
Sbjct: 190 CAMNCQFCYTGRMGLKRHLTTAEIVDQVVSAQRLLTSDAGSITNVVFMGMGEPL----QN 245

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
           ++ V+K    + H Q L F  R   +    + P+L + L+E+     +A+  N   +   
Sbjct: 246 IENVIKAADIMVHDQGLHFSPRKVTISTSGLVPQLKRFLRESN--CALAVSLNATTDEVR 303

Query: 222 EAIAAISRLANAGIIL---------------LSQSVLLKGIND---DPEILANLMR 259
             I  I+R  N G++L               L + V+L G+ND   D E L++L++
Sbjct: 304 NWIMPINRKYNLGLLLDTLRKELHFKNNYKVLFEYVMLAGVNDSLEDAERLSDLVQ 359


>gi|52549924|gb|AAU83773.1| coenzyme PQQ synthesis protein [uncultured archaeon GZfos33H6]
          Length = 317

 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 26/209 (12%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQI-WEVIFTGGDPLIL 157
           +L  C  +CR CFR    G   GT+LS ++T   A  A ++   ++  + + TGG+P  L
Sbjct: 21  MLTGCDFHCRGCFRPARDGG--GTLLSPEETLKRAEQACLKHYGKLPTKAMITGGEP-TL 77

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYI 209
             + L  ++K L      +I+   +   I   +  N      LK+AG        K    
Sbjct: 78  DKEFLLTLVKGLEEKGFEEIILMSNGYEI--GREGNGNYAAELKDAGLTEAHIDIKAFSD 135

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVE 263
            IH  +  + ++  + A+  L + G+ LL Q+V + GI D  EI      L+N+  + ++
Sbjct: 136 EIHIWYTGKSNKPVLNAVRMLNDTGVELLIQTVYMPGIVDVEEIEQIAIFLSNV-NSDIK 194

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           LRI P+    P  A      R TIE+ ++
Sbjct: 195 LRINPF---APTFAFERVTERPTIEDMER 220


>gi|310827022|ref|YP_003959379.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum
           KIST612]
 gi|308738756|gb|ADO36416.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum
           KIST612]
          Length = 318

 Score = 43.1 bits (100), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 29/240 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +  +C + C +C   E V  ++  T LS ++ EA L        I ++  TGG+PL+ 
Sbjct: 14  ISITDLCNLRCVYCMPEEGVPKRRHATNLSFEEIEA-LVRAGADMGIDKIRLTGGEPLVR 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
           +   +  ++K L  I  ++     +   ++      PE+   LK AG + V I++    P
Sbjct: 73  AG--VLDLVKKLGAIPGIRDFAMTTNGILL------PEMAADLKAAGLRRVNISLDTFDP 124

Query: 217 YEFS--------EEAIAAISRLANAGIILLS-QSVLLKGINDDP-EILANLMRTF-VELR 265
            +++        E+A+A I     AG+  L   +VL+KG NDD  E   +  +T  VE+R
Sbjct: 125 EKYARITRCGRLEDALAGIDAAVAAGLTPLKINTVLIKGFNDDEIEAFVHYTKTRPVEVR 184

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY---ILDLPGGYGKVKI 322
               ++    L  G  +       G+ ++A + E +     P     +  LPG  GKV +
Sbjct: 185 ----FIELMPLGDGAEYAFGQYMPGEAVLARVPELVPAASPPGAPARLCTLPGALGKVGL 240


>gi|225028013|ref|ZP_03717205.1| hypothetical protein EUBHAL_02282 [Eubacterium hallii DSM 3353]
 gi|224954727|gb|EEG35936.1| hypothetical protein EUBHAL_02282 [Eubacterium hallii DSM 3353]
          Length = 444

 Score = 42.7 bits (99), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 52/164 (31%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+   H C   C FCF  +M    + T L  KD ++ L+++Q            G+ + L
Sbjct: 83  LMDEYHSCCNKCMFCFIDQMPPGMRDT-LYFKDDDSRLSFLQ------------GNYITL 129

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
           ++ R + + + ++Y  H+                              P+ I++H  +P 
Sbjct: 130 TNMRDKDIERVIKY--HLS-----------------------------PINISVHTTNPE 158

Query: 218 --------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
                    F+ + +  I R   AGI + SQ VL +G+ND+ E+
Sbjct: 159 LRCKMLHNRFAGDVLDKIGRFYEAGIRMNSQVVLCQGLNDEEEL 202


>gi|258513433|ref|YP_003189655.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777138|gb|ACV61032.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 452

 Score = 42.7 bits (99), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 15/136 (11%)

Query: 39  LTPVIANLINPHNPNDPIARQFIPQ-KEELNILPEE----REDPIGDNNHSPLKGIVHRY 93
           L+  I +++N H   D  + Q I    +E+N L +E     EDP+ +N++ P +G+V   
Sbjct: 36  LSLSIEDILNKHR--DIYSEQEITGVCDEINELRKEGLLFSEDPLQNNDYLPGEGVVKA- 92

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIFT 150
              + L L H C + CR+CF  +        ++     + A+ ++ + S   +  EV F 
Sbjct: 93  ---LCLHLAHDCNMRCRYCFAGQGKFGGSSDLMPLNVGKKAMEFLIKSSGSRRNIEVDFF 149

Query: 151 GGDPLILSHKRLQKVL 166
           GG+PL ++ K LQ ++
Sbjct: 150 GGEPL-MNFKVLQDLV 164


>gi|296271625|ref|YP_003654256.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter
           nitrofigilis DSM 7299]
 gi|296095800|gb|ADG91750.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter
           nitrofigilis DSM 7299]
          Length = 482

 Score = 42.7 bits (99), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 91/232 (39%), Gaps = 37/232 (15%)

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK-----GT 124
           L +E  D I  NNH       H++  RI + +   C + C +C R+    ++        
Sbjct: 14  LQQEVMDKI--NNHPCYSEGAHQHYARIHVAVAPACNIQCNYCNRKFDCSNESRPGVTSA 71

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV---QILRFH 181
            LS +D    + Y+    Q   V+   G    L++ +  K   T R +      Q L   
Sbjct: 72  KLSPEDAVKKVLYVGGDIQQLSVVGIAGPGDALANPK--KTFDTFRMLHEKAPDQKLCLS 129

Query: 182 S---RVPI---------VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS--------E 221
           +   R+P          VD   +    +    E G  +Y  +H NH   F         E
Sbjct: 130 TNGLRLPDYVDEMVKYNVDHVTVTINSVDPTGEIGAKIYPWVHWNHEKVFGAEGAKILLE 189

Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           + +  I  L   GI++ + SVL+ G+ND    L N+ +   EL +   +LH+
Sbjct: 190 QQLKGIKMLTERGILVKANSVLIPGVNDKE--LVNVAKKLKELNV---FLHN 236


>gi|319790295|ref|YP_004151928.1| radical SAM enzyme, Cfr family [Thermovibrio ammonificans HB-1]
 gi|317114797|gb|ADU97287.1| radical SAM enzyme, Cfr family [Thermovibrio ammonificans HB-1]
          Length = 345

 Score = 42.7 bits (99), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 31/176 (17%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVIFTG-GDPLIL 157
           CP  CRFC     + ++ G   +    E    YIQ      E  +I  V+F G G+PL+ 
Sbjct: 110 CPAGCRFC-----LTAKDGFTRNLTAGEIVDQYIQVQRDVGENRRISNVVFMGMGEPLL- 163

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA--- 213
                  V K +  + H  +L   +R   V    I P + +  KE  K  + +++HA   
Sbjct: 164 ---NFDNVKKAVEIMTHRDMLDLSTRKVTVSTVGIVPGIDRMAKEMNKVKLAVSLHATTD 220

Query: 214 ---------NHPYEFSEEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILANLMR 259
                    N  Y   E  +AA+ R  A+    ++ + V+LKG+ND  E    L++
Sbjct: 221 EVRNMLVPLNRKYPIGE-IMAALRRYPADNNRRIMIEYVMLKGVNDSLEDARRLVK 275


>gi|161527549|ref|YP_001581375.1| radical SAM protein [Nitrosopumilus maritimus SCM1]
 gi|160338850|gb|ABX11937.1| Radical SAM domain protein [Nitrosopumilus maritimus SCM1]
          Length = 237

 Score = 42.4 bits (98), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y  + L   L  CP  C +C  +E +    GT  S +D    L     K+Q ++V FTGG
Sbjct: 19  YGTKTLFVRLAGCPFTCFYCDTKESLPLDSGTEYSIEDANQ-LIDSNLKNQTYKVNFTGG 77

Query: 153 DPLI------LSHKRLQ-KVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
           DPLI      L  K +Q K + T        I RF+  +P +D  +I
Sbjct: 78  DPLIQHQAVALLAKHIQEKKIPTYLESSCFDIDRFNHVLPFIDIVKI 124


>gi|90416699|ref|ZP_01224629.1| molybdenum cofactor biosynthesis protein A [marine gamma
           proteobacterium HTCC2207]
 gi|90331452|gb|EAS46688.1| molybdenum cofactor biosynthesis protein A [marine gamma
           proteobacterium HTCC2207]
          Length = 336

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 27/210 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFT 150
           R  D + L +   C + C +C   EM    K  +LS ++  +AA A+++    I ++  T
Sbjct: 18  RSVDYLRLSVTDRCNLRCTYCMAEEMTFLPKQQILSLEELRDAATAFVELG--IRKIRLT 75

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYI 209
           GG+PLI   + + K++ +L  +  +  L   +   ++      P + Q LK+AG   + I
Sbjct: 76  GGEPLI--RRDILKLVSSLSALPGLDELTMTTNGLLL------PTMAQPLKDAGISRLNI 127

Query: 210 AIHANHPYEFSE-----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
           ++ +     F +           E I A + +    I L   +V+L G NDD  I  +L 
Sbjct: 128 SVDSLKAERFKQLTRVGDLSQVLEGIHAANAVGFGKIKL--NAVILAGFNDDEVI--DLA 183

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
           R  V+  +   ++    L   +SH R+  +
Sbjct: 184 RFAVDNGMDISFIEEMPLGEISSHKRVNTQ 213


>gi|291546331|emb|CBL19439.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus sp.
           SR1/5]
          Length = 462

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 38/150 (25%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C   C FCF  +M    + T L  KD ++ L+++Q            G+ + L++   + 
Sbjct: 92  CSNKCMFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYVTLTNMSEKD 138

Query: 165 VLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
           + + +RY  H++        PI +  Q +NPEL +C           +H      F+ +A
Sbjct: 139 IERVIRY--HLE--------PINISFQAMNPEL-RCK---------MLHNR----FAGKA 174

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEI 253
           +  +  L NAGI +  Q VL KG+ND  E+
Sbjct: 175 LDKVDMLYNAGITMNGQIVLCKGVNDGDEL 204


>gi|213418029|ref|ZP_03351106.1| KamA family protein [Salmonella enterica subsp. enterica serovar
          Typhi str. E01-6750]
          Length = 67

 Score = 42.0 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL 99
          NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL
Sbjct: 17 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALL 64


>gi|88800258|ref|ZP_01115825.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297]
 gi|88776973|gb|EAR08181.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297]
          Length = 322

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 21/179 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYIQEKSQIWEVIFTGGDPLIL 157
           L +  VC   C +C      G      LS+ + EAA+  + Q  +Q  ++  TGG+P + 
Sbjct: 15  LSVTDVCNFRCSYCLPDGYQGKPDEAFLSASELEAAVRGFAQMGTQ--KIRLTGGEPGLR 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
           S   L +++  L  I  +      + + +       P+ IQ   +AG   + ++I +   
Sbjct: 73  SD--LPEIIYRLNRIDGI------NNIAVTTNGYKLPQRIQHWADAGLNHLNVSIDSLDS 124

Query: 217 YEFSE--------EAIAAISRLANAGIILLSQSVLLKGINDD-PEILANLMRTFVELRI 266
             F E        E +  +++    G+ +   +VL+KG+NDD   +L  L +T V LR 
Sbjct: 125 STFHEITGHDRLAEVLEGLAKARELGLTVKVNAVLMKGVNDDLAAVLTWLKQTPVTLRF 183


>gi|295110182|emb|CBL24135.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus
           obeum A2-162]
          Length = 460

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 38/154 (24%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C  +C FCF  +M    + T L  KD ++ L+++Q            G+ + L++   + 
Sbjct: 90  CSNHCMFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYVTLTNMSQED 136

Query: 165 VLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
           + + ++Y  H+         PI V  Q +NP+L +C           +H      F+ +A
Sbjct: 137 IERVIKY--HLS--------PINVSFQAMNPKL-RCK---------MLHNR----FAGDA 172

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
           +  + RL  AGI +  Q VL KG+ND  E+  +L
Sbjct: 173 LKKVDRLYEAGITMNGQIVLCKGVNDGEELEYSL 206


>gi|251772224|gb|EES52794.1| conserved protein of unknown function [Leptospirillum
           ferrodiazotrophum]
          Length = 464

 Score = 42.0 bits (97), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 12/78 (15%)

Query: 195 ELIQCLKEAGKPVYIAIHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKG 246
           + ++ L++   P+YI++HA  P         + +++ +  + RL N GI L +Q VL+ G
Sbjct: 148 DYLRILEQRLSPLYISVHATEPALRRQILKNDRAQDVLPLLERLCNGGITLHTQVVLMPG 207

Query: 247 INDDPEILANLMRTFVEL 264
           IND       L+RT+ +L
Sbjct: 208 INDG----EALLRTWKDL 221


>gi|125625194|ref|YP_001033677.1| hypothetical protein llmg_2436 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124494002|emb|CAL99000.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
          Length = 275

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 15/113 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P ++ + L + C   C +CF +EM      T   SK+    +AY  EK ++  V   GGD
Sbjct: 10  PIKVYIYLTNHCHYECDYCFLKEM--KMLNTKEISKEDLEKIAYYLEKYKVPLVAICGGD 67

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV--DPQRINPELIQCLKEAG 204
           P++  H  L         I  VQ+L  H   PI+  +   I+ E +  LK AG
Sbjct: 68  PIL--HPSL---------INFVQLLSEHKNYPIIATNAVDISYEYLYQLKSAG 109


>gi|154503634|ref|ZP_02040694.1| hypothetical protein RUMGNA_01458 [Ruminococcus gnavus ATCC 29149]
 gi|260589858|ref|ZP_05855771.1| putative radical SAM domain protein [Blautia hansenii DSM 20583]
 gi|153795734|gb|EDN78154.1| hypothetical protein RUMGNA_01458 [Ruminococcus gnavus ATCC 29149]
 gi|260539665|gb|EEX20234.1| putative radical SAM domain protein [Blautia hansenii DSM 20583]
          Length = 463

 Score = 41.6 bits (96), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTV---LSSKDTEAALAYIQEKSQIWEVIFT 150
           PD ++L L   C + C++C+  +   S  G +   +  K  +    +  EK Q + +IF 
Sbjct: 103 PDTVILMLCQECNLRCKYCYAGDGEYSNPGIMKYEIGKKAIDFIAEFCGEKEQ-FNIIFF 161

Query: 151 GGDPLILSHKRLQKVLKTLRYI 172
           GG+PL +  ++L+K+++   Y+
Sbjct: 162 GGEPL-MDFRKLKKLVEYAEYV 182


>gi|302388629|ref|YP_003824450.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646]
 gi|302199257|gb|ADL06827.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646]
          Length = 203

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 9/86 (10%)

Query: 93  YP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVI 148
           YP  D + L + + CP  C FC R+   G +   +   K+  T+  +  I + S   EV+
Sbjct: 6   YPIGDSLYLNITNRCPNRCSFCIRQLGDGIEGYNLWLDKEPTTKEIIEAIGDPSGYREVV 65

Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIK 173
           F G G+PL+    RLQ VL   RY+K
Sbjct: 66  FCGYGEPLM----RLQVVLDVARYLK 87


>gi|307946521|ref|ZP_07661856.1| putative radical SAM domain protein [Roseibium sp. TrichSKD4]
 gi|307770185|gb|EFO29411.1| putative radical SAM domain protein [Roseibium sp. TrichSKD4]
          Length = 472

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 59/124 (47%), Gaps = 7/124 (5%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL--AYIQEKSQIWEVIFTGG 152
           + ++L +  +C + C +C+  ++  +  G ++S    + AL  AY    + +  + F GG
Sbjct: 78  EDLVLNISQICNLACSYCYADDL--NSAGKIMSKSVCQEALDRAYQMSDTGLKSLKFLGG 135

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           +P  L+ + ++  ++    I   +  R  S V + +  +IN E+ Q    A K  Y+ + 
Sbjct: 136 EP-TLAFEEIKYAVEYAETICAAEGYRLPSFVIVTNGTKINAEMAQFF--ASKNFYVLVS 192

Query: 213 ANHP 216
            + P
Sbjct: 193 MDGP 196


>gi|303239826|ref|ZP_07326349.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Acetivibrio cellulolyticus CD2]
 gi|302592536|gb|EFL62261.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Acetivibrio cellulolyticus CD2]
          Length = 227

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 26/168 (15%)

Query: 93  YPDRILLKLLH-VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           YP ++   L    C + C +C  R +V   +G   +  D +  L++++++    E V+ +
Sbjct: 14  YPGKMCAVLFTPGCNMDCFYCHNRALV---EGGHENITDADEVLSFLEKRKGFLEGVVVS 70

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P       LQK L  L ++K V+ L +  ++   D    NP++++ +   G   YIA
Sbjct: 71  GGEPT------LQKGL--LPFLKDVKRLGYSIKL---DTNGTNPDVVENVLHKGLIDYIA 119

Query: 211 IHANHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGIN 248
           +    PYE   E           + ++  L N+GI    ++ L  G++
Sbjct: 120 MDFKAPYEKYNEICRTEVDIGNVMRSVDLLINSGIDYEFRTTLAPGLD 167


>gi|283797873|ref|ZP_06347026.1| PDZ domain protein [Clostridium sp. M62/1]
 gi|291074564|gb|EFE11928.1| PDZ domain protein [Clostridium sp. M62/1]
          Length = 465

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 39/187 (20%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T L  KD ++ L+++Q            G+ + L
Sbjct: 82  LMSEYRSCHNKCIFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYITL 128

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
           ++ + +   +         I+RFH     +  Q +NP+L +C     +            
Sbjct: 129 TNMKDKDFER---------IIRFHLAPINISVQTMNPKL-RCRMLNNR------------ 166

Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
            F+ EA+  I RL  AGI +  Q VL KG+ND  E+  ++       R  PY      + 
Sbjct: 167 -FAGEALKKIDRLYEAGIPMNGQIVLCKGVNDGRELDFSIREL---TRYIPYMQSVSVVP 222

Query: 278 AGTSHFR 284
            G S +R
Sbjct: 223 VGLSRYR 229


>gi|229816073|ref|ZP_04446394.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM
           13280]
 gi|229808387|gb|EEP44168.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM
           13280]
          Length = 441

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 14/143 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTGGD 153
           I L + HVC + C +CF  +     +  ++  K   AA+ Y+     K+ +  ++F GG+
Sbjct: 90  IELHVAHVCNLGCDYCFAGKGNYGTQSLLMKEKVAYAAVDYLVHNSSKNDVLTIVFFGGE 149

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           P++  ++ L  + KT+ Y +     R  +     +   +N   I+  KE G  + +++  
Sbjct: 150 PML--NEPL--IWKTVDYAESAHPKRRFTYSITTNGTLLNDRAIEAFKEHGFSILVSLDG 205

Query: 214 -------NHPYEFSEEAIAAISR 229
                  + PY+    + A I R
Sbjct: 206 VGCKHDESRPYKNGRGSFADIER 228


>gi|52549689|gb|AAU83538.1| coenzyme PQQ synthesis protein [uncultured archaeon GZfos30H9]
          Length = 317

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQI-WEVIFTGGDPLIL 157
           +L  C  +CR CFR    G   GT+LS ++T   A  A ++    +  + + TGG+P  L
Sbjct: 21  MLTGCDFHCRGCFRPARDGG--GTLLSPEETLKRAEQACLKHYGTLPTKAMITGGEP-TL 77

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYI 209
             + L  ++K L      +I+   +   I   +  N      LK+AG        K    
Sbjct: 78  DKEFLLTLVKGLEEKGFKEIILMSNGYEI--GREGNDNYAAELKDAGLTEAHIDIKAFSD 135

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE-----ILANLMRTFVEL 264
            IH  +  + ++  + A+  L + G+ LL Q+V + GI D  E     I  + + + ++ 
Sbjct: 136 EIHIWYTGKSNKPVLNAVRMLNDTGMELLIQTVYMPGIVDVEEIEQIAIFLSDVNSNIKF 195

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           RI P+    P  A      R TIE+ ++
Sbjct: 196 RINPF---APSFAFERVTERPTIEDMER 220


>gi|317471603|ref|ZP_07930947.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp.
           3_2_56FAA]
 gi|316900918|gb|EFV22888.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp.
           3_2_56FAA]
          Length = 324

 Score = 41.2 bits (95), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 35/254 (13%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           +K I  R  D + + +   C + CR+C   ++   +   +LS    E  L+  +  + + 
Sbjct: 1   MKDIYGRTIDYMRISVTDRCNLRCRYCMPEDIPSVEHTDILS---YEELLSICESAADLG 57

Query: 146 EVIF--TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
              F  TGG+PL+   K     ++ L+ +  V+ +   S   +++P       ++ LKEA
Sbjct: 58  ICKFKITGGEPLV--RKGCAGFIERLKQLPGVRQVTLTSNGLLLEP------YLERLKEA 109

Query: 204 G-KPVYIAIHANHPYEFSE--------EAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           G   + I++      ++ E          ++A+   A  G+      V++KGINDD EIL
Sbjct: 110 GIDGINISLDTLDEKKYKEITGKTGVQTVLSAVRNSARMGLNTKVNCVVMKGINDD-EIL 168

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ-------- 306
            +L+    E  +   ++    +  GT    +  +E   I++ L++   G+ +        
Sbjct: 169 -DLLEIGREDHVDIRFIEMMPIGFGTQFTGMNSDE---IISLLRQTYPGIKKEEQIRGNG 224

Query: 307 PFYILDLPGGYGKV 320
           P   L +PG  G V
Sbjct: 225 PARYLKIPGFSGAV 238


>gi|312623314|ref|YP_004024927.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor kronotskyensis 2002]
 gi|312203781|gb|ADQ47108.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 231

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 29/191 (15%)

Query: 93  YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           YP +I        C   C FC+  E+V + KG  +   D      Y+ ++  I + V  T
Sbjct: 13  YPKKIAATCFFGGCNFSCPFCYNSELV-NFKGKFM---DDSIFFEYLDKRKGIVDAVCIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P  L+ + L + +K    IK   +L        +D     PE++Q L +AG   Y+A
Sbjct: 69  GGEP-TLNEEYLTEFIKK---IKQKNLL------VKLDTNGSKPEVLQRLLDAGLLDYVA 118

Query: 211 IHANHPYE-------FS--EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           +    P E       FS  ++ I +I  L N+ I    ++ + K ++   +IL N+ R  
Sbjct: 119 MDVKAPLEKYPQITGFSDVDKIIRSIEILKNSNIDYEFRTTVNKNLHTVEDIL-NIARLL 177

Query: 262 VELR---IKPY 269
            + R   IKPY
Sbjct: 178 KDSRLYIIKPY 188


>gi|153812951|ref|ZP_01965619.1| hypothetical protein RUMOBE_03358 [Ruminococcus obeum ATCC 29174]
 gi|149830898|gb|EDM85988.1| hypothetical protein RUMOBE_03358 [Ruminococcus obeum ATCC 29174]
          Length = 468

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 38/156 (24%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C  +C FCF  +M    + T L  KD ++ L+++Q            G+ + L++   + 
Sbjct: 98  CSNHCMFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYVTLTNMSQED 144

Query: 165 VLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
           + + ++Y  H+         PI V  Q +NP+L +C           +H      F+ +A
Sbjct: 145 IERVIKY--HLS--------PINVSFQAMNPQL-RCK---------MLHNR----FAGDA 180

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           +  + +L  AGI +  Q VL KG+ND  E+  +L +
Sbjct: 181 LKKVDQLYEAGITMNGQIVLCKGVNDGEELEYSLQK 216


>gi|70607223|ref|YP_256093.1| molybdenum cofactor biosynthesis protein A [Sulfolobus
           acidocaldarius DSM 639]
 gi|76363232|sp|Q4J8T0|MOAA_SULAC RecName: Full=Probable molybdenum cofactor biosynthesis protein A
 gi|68567871|gb|AAY80800.1| molybdenum cofactor biosynthesis protein A [Sulfolobus
           acidocaldarius DSM 639]
          Length = 313

 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 13/137 (9%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           +K +  R  + + + L H C   C FC    M G   G  L S D  + +A I  +  I 
Sbjct: 1   MKDVYGRELEDLRITLTHACNFTCFFC---HMEGENDGDSLLSADQISLVAQIGMEFGIR 57

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
            V  TGG+P +   + L +++  L   K V I      V +     +  EL   LK+AG 
Sbjct: 58  TVKLTGGEPTL--RRDLPEIISKL---KEVGI----KEVSMTTNGYLLKELAGKLKDAGL 108

Query: 205 KPVYIAIHANHPYEFSE 221
             V I++H+  P  F E
Sbjct: 109 DRVNISLHSIDPVIFKE 125


>gi|304310967|ref|YP_003810565.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium
           HdN1]
 gi|301796700|emb|CBL44912.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium
           HdN1]
          Length = 332

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 23/215 (10%)

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
           N+ +PL     R    + L +   C   C +C   +M    +  VLS ++ +  +A +  
Sbjct: 2   NSSTPLIDAFGRKVTYLRLSVTDRCDFRCVYCMSEQMQFLPRSQVLSLEEMQ-TIAAVFV 60

Query: 141 KSQIWEVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
              + ++  TGG+PL+      L + L  L  +K + +    +++          +L + 
Sbjct: 61  GLGVTKIRLTGGEPLVRKDCVSLVRGLSELEGLKEITLTTNGNQL---------AQLAKP 111

Query: 200 LKEAG-KPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLS-QSVLLKGIND 249
           LKEAG   + I++ + +P +F          + +A I    +AG       +V++KG ND
Sbjct: 112 LKEAGLGRINISLDSLNPEKFHAITRTGQLSQVLAGIDAAVDAGFDGTKLNAVIMKGRND 171

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
           D EI+A L    V   +   Y+    L  G +H R
Sbjct: 172 D-EIIA-LAEYAVSKGVDITYIEEMPLGEGINHDR 204


>gi|315649901|ref|ZP_07902983.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex
           V453]
 gi|315274700|gb|EFU38082.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex
           V453]
          Length = 334

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 28/181 (15%)

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           PLK    R  D I + +   C + C +C   E +  Q    + S +  AA+  +     +
Sbjct: 4   PLKDSFGRVHDYIRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAILRVLAPMGV 63

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            +V  TGG+PL+   K L+ +++ +  I+ +Q +   +   ++      P   + LKEAG
Sbjct: 64  SKVRLTGGEPLV--RKDLENLVRMIASIEGIQDISLTTNGIML------PSKARLLKEAG 115

Query: 205 -KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS--------------QSVLLKGIND 249
              + I++ + H     EE  A I+R  +   +L                  VL+KG N+
Sbjct: 116 LTRINISLDSLH-----EERYARITRGGHVSKVLEGIEAAYEAGLDPIKLNMVLMKGFNE 170

Query: 250 D 250
           D
Sbjct: 171 D 171


>gi|15674140|ref|NP_268315.1| hypothetical protein L16911 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12725218|gb|AAK06256.1|AE006444_7 unknown protein [Lactococcus lactis subsp. lactis Il1403]
          Length = 275

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 15/113 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P ++ + L + C   C +CF +EM      T   SK+    +AY  EK ++  V   GGD
Sbjct: 10  PIKVYIYLTNHCHYECDYCFLKEM--KMLNTKEISKEDLEKIAYYLEKYKVPLVAICGGD 67

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--ELIQCLKEAG 204
           P++  H +L         I  VQ+L  H   P +    ++   E +  LK AG
Sbjct: 68  PIL--HPKL---------IDFVQLLSEHKNYPTIATNAVDVSYEYLYQLKSAG 109


>gi|254172055|ref|ZP_04878731.1| radical SAM domain protein [Thermococcus sp. AM4]
 gi|214033951|gb|EEB74777.1| radical SAM domain protein [Thermococcus sp. AM4]
          Length = 419

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 33/184 (17%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144
           G++ R  + I ++ +  C + C FC   E   S+   +    D +  + +  E ++I   
Sbjct: 108 GLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167

Query: 145 -WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQ 198
             E    G G+PLI   +           ++ VQ LR H  V ++  Q     +  +L++
Sbjct: 168 GLEAHLDGQGEPLIYPFR-----------VELVQALREHPNVSVISMQSNGTLLTDKLVE 216

Query: 199 CLKEAG-KPVYIAIHANHP-----------YEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            L EAG   V ++IH+  P           Y+  E  +     L NAGI +L   V++ G
Sbjct: 217 ELAEAGLDRVNLSIHSLDPEKAKMLMGMKSYDL-EHVLEMAEALVNAGIDVLIAPVIIFG 275

Query: 247 INDD 250
           INDD
Sbjct: 276 INDD 279


>gi|117928855|ref|YP_873406.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B]
 gi|166217236|sp|A0LVG0|MOAA_ACIC1 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|117649318|gb|ABK53420.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B]
          Length = 362

 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 36/201 (17%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKD- 130
           PI D+   PL+ +     DR        C + CR+C  RE+ G       +  +L+ ++ 
Sbjct: 4   PIRDSLGRPLRDLRISVTDR--------CNMRCRYCMPREIFGPNFTFLPRSELLTFEEI 55

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
           T  A A+I  ++ + ++  TGG+PL+ +   L +++  L  +  V  L   +   ++   
Sbjct: 56  TRIAAAFI--RAGVRKIRLTGGEPLLRAD--LPRLVAMLADLPDVHDLALTTNGSLL--- 108

Query: 191 RINPELIQCLKEAG-KPVYIAIHANHPYEFSEEA---------IAAISRLANAGIILLS- 239
                  + L++AG + V +++   +P  FS  A         +A I    +AG   +  
Sbjct: 109 ---ARYARPLRDAGLRRVTVSLDTLNPATFSRLADTDIPLDNVLAGIDAAQSAGFFPIKL 165

Query: 240 QSVLLKGIND-DPEILANLMR 259
            +V+ +G+ND D E LA   R
Sbjct: 166 NAVIRRGVNDGDVEELAAFAR 186


>gi|193212999|ref|YP_001998952.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum
           NCIB 8327]
 gi|193086476|gb|ACF11752.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum
           NCIB 8327]
          Length = 333

 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 50/276 (18%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           P  + N + L     R  D + + +   C + C +C + E    +K   L +  T A + 
Sbjct: 3   PDSEQNRAALTDRFGRTIDYVRIAVTSACNLRCTYCLKNEEDADRKIDQLDADQTVAVIE 62

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
            + +   I +V FTGG+PL+  H  + ++++  +    +  ++F +   ++D  R   EL
Sbjct: 63  VLAQMG-IRKVRFTGGEPLL--HPDIVELVRRAKATPGIDTVKFTTNGILLD--RYLDEL 117

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-----AIAAISRLANA-GIILLSQSVLLKGINDD 250
           I    +        + A    + +         AA+ RL +   + +   +++L+GIN+D
Sbjct: 118 IAAGLDGINLSLDTLDAQKYRDITRRDRFASVRAALDRLLDIPDMSVKINTLMLRGINND 177

Query: 251 --PEILANLMRT------FVELRIKPY---------------------YLHHPDLAAGTS 281
             P+ +  L R+      F+EL  +P+                     + H+P L A T 
Sbjct: 178 EIPDFV-ELTRSHKLNVRFMEL--QPFDDQQIWRTGKFMGAEMIREQLFQHYPQLEAVTG 234

Query: 282 H------FRLTIEEGQ-KIVASLKEKISGLCQPFYI 310
                  FRL+  +G   I+ +      G C    I
Sbjct: 235 RDTEHYSFRLSNYQGSIAIIPAFSRNFCGSCSRLRI 270


>gi|256423142|ref|YP_003123795.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis
           DSM 2588]
 gi|256038050|gb|ACU61594.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis
           DSM 2588]
          Length = 326

 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 27/173 (15%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           +R  D + + L   C + C +C   E       + L   D  A LA I   + + ++  T
Sbjct: 7   NRVHDYLRISLTDNCNLRCFYCMPEEDYDFTPASRLMQADEIATLAGIFTANGVRKIRLT 66

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP----ELIQCLKEAG-K 205
           GG+PL+   K   K++ +L            SR+P+      N     E    L+EAG +
Sbjct: 67  GGEPLV--RKDAAKIILSL------------SRLPVELTMTTNGARLHEFADVLEEAGIR 112

Query: 206 PVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDD 250
            + I++      +F          +  + I  L N GI +    V++KG+ND+
Sbjct: 113 SLNISLDTLQADKFMLITRRDLFHQVKSNIDLLLNMGIRVKVNVVMMKGLNDN 165


>gi|307824586|ref|ZP_07654810.1| coenzyme PQQ biosynthesis protein E [Methylobacter tundripaludum
           SV96]
 gi|307734240|gb|EFO05093.1| coenzyme PQQ biosynthesis protein E [Methylobacter tundripaludum
           SV96]
          Length = 375

 Score = 40.0 bits (92), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 55/236 (23%), Positives = 109/236 (46%), Gaps = 34/236 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  +L +L + CP+ C +C    +  +   + L ++D +  L   ++   + ++ F+GG+
Sbjct: 12  PRWLLAELTYACPLQCPYC-SNPIDYATYQSELDTEDWKRVLTQARKMGAV-QLGFSGGE 69

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
           PL       +K L  L  +KH + L ++S + I     +  E I  LKEAG   + ++I 
Sbjct: 70  PLT------RKDLPEL--VKHARDLGYYSNL-ITSGYGLTEEKIVQLKEAGLDHIQVSIQ 120

Query: 213 ANH-----------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA---NLM 258
           A+             ++  +E    + +  +   ++L   +  + I+  PEILA    L 
Sbjct: 121 ASSQELNDHIAGTASFQHKKEVAHLVKK--HGYPMVLCVVIHRENIHQMPEILAMAEELG 178

Query: 259 RTFVELRIKPYYLH---HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
             ++EL    YY     + DL   T   +   E+ ++I  + KEK++G  + +Y++
Sbjct: 179 ADYLELANTQYYGWAHANRDLLLPT---KEQFEQAEQIAQAFKEKVAGKMKIYYVV 231


>gi|327311467|ref|YP_004338364.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus
           uzoniensis 768-20]
 gi|326947946|gb|AEA13052.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus
           uzoniensis 768-20]
          Length = 341

 Score = 39.7 bits (91), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 38/191 (19%)

Query: 89  IVHRYPDRILLKLL----HVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           +V RY  R  LKL      VC   C FC F  ++ G  +   L + D    L  +  K  
Sbjct: 29  LVDRY-GRPFLKLRVAVNDVCNFSCIFCHFEGQLRGVGR---LLNADDYGFLVDVLSKVG 84

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI-----VDPQRINPELIQ 198
           + +   TGG+PL+ S                V I+R  +R  +      +  R+      
Sbjct: 85  VRDYKLTGGEPLLRSD--------------IVDIVRKMNRDGVEISMTTNGFRLAELAED 130

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEA----------IAAISRLANAGIILLSQSVLLKGIN 248
                 + V +++H   P +FS+ A          +  +     AG+ +   +VLLKGIN
Sbjct: 131 LAAAGLRRVNVSVHTTDPEKFSKVAGVPKEWFRRVLDGVHAAVKAGMKVKLNAVLLKGIN 190

Query: 249 DDPEILANLMR 259
           DD E L +L++
Sbjct: 191 DDRESLRSLVK 201


>gi|323141165|ref|ZP_08076066.1| 23S rRNA m2A2503 methyltransferase [Phascolarctobacterium sp. YIT
           12067]
 gi|322414308|gb|EFY05126.1| 23S rRNA m2A2503 methyltransferase [Phascolarctobacterium sp. YIT
           12067]
          Length = 351

 Score = 39.7 bits (91), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 35/180 (19%)

Query: 105 CPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEK-----SQIWEVIFTG-GDPLI 156
           C ++C FC         KG V  L++ +  A +    E+     + +  V+  G G+P++
Sbjct: 113 CDMHCAFC-----ASGLKGAVRNLTAAEIVAQVYLFNERLREQGAMVSRVVVMGSGEPML 167

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--HA- 213
                   VL+ L ++          R   +    I P  I+ L+E G P+ +AI  HA 
Sbjct: 168 ----NFDSVLQALDFLHREDTCNMSYRNMTISTCGIIPG-IKRLEEQGNPINLAISLHAV 222

Query: 214 -----------NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP---EILANLMR 259
                      N  Y F +   AA S    +G  +  + +LLKG ND P   E+L+N +R
Sbjct: 223 KNELRTALMPVNKGYPFVDVLTAAESYSKASGRQITYEYILLKGKNDSPQDAELLSNYLR 282


>gi|39935047|ref|NP_947323.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
           palustris CGA009]
 gi|123773347|sp|Q3V7S1|MOAA_RHOPA RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|39648898|emb|CAE27419.1| molybdenum biosynthetic protein A [Rhodopseudomonas palustris
           CGA009]
          Length = 344

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 17/184 (9%)

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           P+     R  D + + +   C   C +C   +M    +  +L+ ++ +   +    K  +
Sbjct: 15  PMTDPFGRTIDYLRVSITDRCDFRCVYCMAEDMTFLPRADLLTLEELDRLCSAFIAKG-V 73

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
            ++  TGG+PL+   + +  ++++L R++K   +             R   EL  C    
Sbjct: 74  RKLRLTGGEPLV--RRNMMSLVRSLSRHLKTGALDELTLTTNGSQLARFAAELADC---G 128

Query: 204 GKPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            + V +++    P EF         E  +A I     AG+ +   SV+LKG N+D   + 
Sbjct: 129 VRRVNVSLDTLDPDEFRRITRWGDLERVLAGIDAARTAGLAVKINSVVLKGSNEDE--IP 186

Query: 256 NLMR 259
           +LMR
Sbjct: 187 SLMR 190


>gi|95929999|ref|ZP_01312739.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
 gi|95133968|gb|EAT15627.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
          Length = 614

 Score = 39.7 bits (91), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 25/175 (14%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
           I +  + HN  +P+ R   P    +++L   +  P  D +  P +G+        L ++ 
Sbjct: 127 IVDAADRHNALEPLYRNSGP----IDLL--HQVSPWLDGSLVPGEGV--------LWEVS 172

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             CP  C FCF        +    S  + E AL      SQ+W +  T   P        
Sbjct: 173 RGCPFRCSFCFDARGDHGVRTMAFSRLEQELALFVKHRVSQVWVLDSTFNYP-------A 225

Query: 163 QKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           ++  K LR IK V   L FH    I   + I+ EL Q L E    V I + + +P
Sbjct: 226 ERGKKLLRLIKRVAPHLHFHLEAKI---EFIDEELAQLLSEIHCSVQIGLQSANP 277


>gi|169335672|ref|ZP_02862865.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258410|gb|EDS72376.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM
           17244]
          Length = 454

 Score = 39.3 bits (90), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 19/135 (14%)

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-- 144
           KGIV      + L + H C + CR+CF      + K  V++ +  + A+ +I   S    
Sbjct: 87  KGIVKA----MCLHVSHDCNLACRYCFASGGNFNMKKEVMNIETAKKAIDFIISNSGNKV 142

Query: 145 -WEVIFTGGDPLILSHKRLQKVLKTLRYI-----KHVQILRFHSRVPIVDPQRINPELIQ 198
             EV F GG+PL+        V KT+ Y      KH +I RF      V    +N E+I 
Sbjct: 143 HLEVDFFGGEPLL----NFDVVKKTVEYAKEEAKKHNKIFRFTLTTNCV---LLNDEIID 195

Query: 199 CLKEAGKPVYIAIHA 213
            L +    V +++  
Sbjct: 196 YLNKEMYNVVLSLDG 210


>gi|307149776|ref|YP_003890819.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
 gi|306986576|gb|ADN18454.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822]
          Length = 5944

 Score = 39.3 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 18/109 (16%)

Query: 247  INDDPEILANLMRTFVELRIKPYYLHHPD---LAAGTSHFRLTIEEGQKIVASLKEKISG 303
            +NDD     NL+ + V L +  + ++  D   L  GT  F L+IE G+ ++ +       
Sbjct: 1538 LNDD-----NLINSIVSLELDLFIINSWDGNHLGYGTDFFNLSIENGETLLNTTFSNTEE 1592

Query: 304  LCQPFY----ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            L Q +       D P G G ++IDT N  + G+  Y      ++V+ +P
Sbjct: 1593 LSQSYPDAWGTGDYPSGTGAIEIDTLNSSEDGSAVY------HLVYTFP 1635


>gi|239820673|ref|YP_002947858.1| Radical SAM domain protein [Variovorax paradoxus S110]
 gi|239805526|gb|ACS22592.1| Radical SAM domain protein [Variovorax paradoxus S110]
          Length = 351

 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 30/213 (14%)

Query: 105 CPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRL 162
           C V CRFC   R+ +  Q G    S +  A +A  + +  + +V+F G G+P   +H  L
Sbjct: 106 CAVGCRFCMTGRDGLLRQVG----SAEIIAQVALARMRRPVRKVVFMGMGEP---AHN-L 157

Query: 163 QKVLKTLRYIKHVQILRFHSRV--PIVDPQ--------RINPELIQCLKEAGKPVYIAIH 212
             V++ +  +  V  +   + V   + DP+        R+ P L   L      +   + 
Sbjct: 158 DNVMEAIELLGTVGNIGHKNLVFSTVGDPRAFERLQQARVRPALALSLHTTKAGLRKKLL 217

Query: 213 ANHPYEFSEEAIAAISRLANA-GIILLSQSVLLKGINDDPEILANLMR----TFVELRIK 267
              P    EE + A  R A A G  +  Q  LL G+ND PE +  ++R     F  L + 
Sbjct: 218 PRAPNMTPEELVGAGERYARATGYPIQYQWTLLDGVNDGPEEIDGIVRLLSGKFGVLNMI 277

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           P+     +   G +  R ++E  +++  +L ++
Sbjct: 278 PF-----NAVEGVAFSRPSLERCEQMARTLHQR 305


>gi|300714617|ref|YP_003739420.1| O2-independent coproporphyrinogen III oxidase [Erwinia billingiae
           Eb661]
 gi|299060453|emb|CAX57560.1| O2-independent coproporphyrinogen III oxidase [Erwinia billingiae
           Eb661]
          Length = 455

 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 18/134 (13%)

Query: 82  NHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           N +  +    RYPDR L   +H+  C   C FC   ++V  Q+    +  D  A  + IQ
Sbjct: 36  NEAAFQQAAQRYPDRPLSLYVHIPFCHRLCYFCGCNKLVTRQQHKADAYLDALA--SEIQ 93

Query: 140 EKSQIW------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQ 190
            +++++      ++ + GG P  L+ +++ +++  LR     Q   F     +   VDP+
Sbjct: 94  SRAKLFRGRTVSQMHWGGGTPTYLNKQQITRLITLLR-----QAFTFSEDAELSIEVDPR 148

Query: 191 RINPELIQCLKEAG 204
            I  +++  L  AG
Sbjct: 149 EIELDVLDHLHAAG 162


>gi|332799081|ref|YP_004460580.1| Radical SAM domain-containing protein [Tepidanaerobacter sp. Re1]
 gi|332696816|gb|AEE91273.1| Radical SAM domain protein [Tepidanaerobacter sp. Re1]
          Length = 454

 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 28/113 (24%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIF 149
           Y   + L + H C + C++CF  +     K  ++S +  + A+ ++ EKS   +  E+ F
Sbjct: 95  YVKALCLNVAHDCNLRCKYCFASKGDYHGKRELMSIEVGKKAVDFLVEKSGDMKNLEIDF 154

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            GG+PL ++   +++V+   + I+ +   +FH  +   +   +N E++Q L E
Sbjct: 155 FGGEPL-MAMNTIKEVISYAKSIEKLCHKKFHFTIT-TNALLLNDEVMQYLHE 205


>gi|320160979|ref|YP_004174203.1| oxygen-independent coproporphyrinogen-III oxidase [Anaerolinea
           thermophila UNI-1]
 gi|319994832|dbj|BAJ63603.1| oxygen-independent coproporphyrinogen-III oxidase [Anaerolinea
           thermophila UNI-1]
          Length = 405

 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 6/104 (5%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----QIWEVIFTGGDPLILSHK 160
           C   C +C      G +K     ++     +A + E +     +  + F GG P  LS  
Sbjct: 25  CVHRCAYCDFNTYAGMEKWIPAYTEALCREIAVVSEAAPEGISVQTIFFGGGTPSYLSAS 84

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            L KVL T+R   H Q++         +P  + P L + L+EAG
Sbjct: 85  LLNKVLHTVR--SHFQVMEKAEISLEANPGTVEPHLFEELREAG 126


>gi|238797624|ref|ZP_04641120.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           mollaretii ATCC 43969]
 gi|238718488|gb|EEQ10308.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           mollaretii ATCC 43969]
          Length = 459

 Score = 39.3 bits (90), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 12/133 (9%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKG------TVLSSKDT 131
           D N S  +  V RYP R L   +H+  C   C FC   ++V  Q+        VL ++  
Sbjct: 37  DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLENEIR 96

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
           + A  +     Q+ ++ + GG P  L+  ++  ++  LR  +H   L    +   VDP+ 
Sbjct: 97  QRAALFA--GRQVSQMHWGGGTPTYLNKTQISHLMNLLR--EHFDFLPGAEQSIEVDPRE 152

Query: 192 INPELIQCLKEAG 204
           I  +++  L+  G
Sbjct: 153 IELDVLDHLRAEG 165


>gi|300855333|ref|YP_003780317.1| putative SNF2 family helicase [Clostridium ljungdahlii DSM 13528]
 gi|300435448|gb|ADK15215.1| predicted SNF2 family helicase [Clostridium ljungdahlii DSM 13528]
          Length = 1080

 Score = 39.3 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 22/182 (12%)

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVD-PQRINPELIQCLKEAGKPVYIAIHANHPYE 218
           K   +V++ L  +    ILR   +  IV+ P +I   L+  L +  K VY   +A+H  +
Sbjct: 806 KESPEVIEELNRLIAPFILRRKKKDVIVELPDKIEKTLMVTLDDKQKKVY-KTYADHAVD 864

Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN-------LMRTFVELRIKPYYL 271
             E+ +       N+ I +LS    L+ +  DP IL N        M   VEL       
Sbjct: 865 LIEKKVKE-DEFKNSKIEILSYITKLRQLCLDPSILINNYSGGNGKMDALVELL------ 917

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331
            H  +A G  H  L   +   ++ ++ EKISG   PF  LD   G  K++   + +KK  
Sbjct: 918 -HKSIAQG--HRILVFSQFTSVLKNIGEKISGEKIPFSYLD---GTIKLEERINIVKKFN 971

Query: 332 NG 333
            G
Sbjct: 972 KG 973


>gi|183221187|ref|YP_001839183.1| hypothetical protein LEPBI_I1801 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911278|ref|YP_001962833.1| thiamine biosynthesis enzyme [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775954|gb|ABZ94255.1| Thiamine biosynthesis enzyme [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167779609|gb|ABZ97907.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 367

 Score = 39.3 bits (90), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 17/170 (10%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI------------L 98
           NPNDP+    +   E   I P+E      + +   ++ +     ++I            +
Sbjct: 9   NPNDPVDSVLLKATEGKRISPKEGLLLYKEGDFLKIQMVARFLREKIRPHSEASYTMFRV 68

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           +   + C V C FC   + +G+ KG VLS +D    + Y  E+    ++   GG    L 
Sbjct: 69  VNYTNYCNVECSFCSFMDEIGNGKGYVLSKEDILQKMDYAMEEGAD-QMFLQGGVYPELP 127

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP----ELIQCLKEAG 204
                 V++T++       +R  S V +++ + I      E+++ LKEAG
Sbjct: 128 FDYYLDVIRTVKAKYPKMHIRAFSPVEVINLETITGKPLREVLEILKEAG 177


>gi|240102758|ref|YP_002959067.1| Radical SAM protein, elongator protein 3/MiaB/NifB related
           [Thermococcus gammatolerans EJ3]
 gi|239910312|gb|ACS33203.1| Radical SAM protein, elongator protein 3/MiaB/NifB related
           [Thermococcus gammatolerans EJ3]
          Length = 419

 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 33/184 (17%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144
           G++ R  + I ++ +  C + C FC   E   S+   +    D +  + +  E ++I   
Sbjct: 108 GLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167

Query: 145 -WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQ 198
             E    G G+PLI   +           ++ VQ LR H  V ++  Q     +  +L++
Sbjct: 168 GLEAHLDGQGEPLIYPFR-----------VELVQALREHPNVSVISMQSNGTLLTDKLVE 216

Query: 199 CLKEAG-KPVYIAIHANHP-----------YEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            L EAG   V ++IH+  P           Y+  +  +     L NAGI +L   V++ G
Sbjct: 217 ELAEAGLDRVNLSIHSLDPEKAKMLMGMKSYDL-DHVLEMAEALVNAGIDVLIAPVIIFG 275

Query: 247 INDD 250
           INDD
Sbjct: 276 INDD 279


>gi|210622341|ref|ZP_03293110.1| hypothetical protein CLOHIR_01058 [Clostridium hiranonis DSM 13275]
 gi|210154329|gb|EEA85335.1| hypothetical protein CLOHIR_01058 [Clostridium hiranonis DSM 13275]
          Length = 442

 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 68/231 (29%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C   C FCF  ++    + T L  KD ++ L+++Q            G+ + L++   Q 
Sbjct: 94  CRNKCMFCFIDQLPKGMRET-LYFKDDDSRLSFLQ------------GNFVTLTNMSEQD 140

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY------- 217
           +   +RY                   RI+P            + I++H  +P        
Sbjct: 141 IEDIIRY-------------------RISP------------INISVHTTNPELRQRMIT 169

Query: 218 -EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRIKP-- 268
             F+    + + RLA AGI +  Q VL  G+ND  E+      L+NL      + I P  
Sbjct: 170 NRFAGRLYSIMERLAEAGITMNCQIVLCPGVNDGKELERTITDLSNLYPNVNSVAIVPVG 229

Query: 269 ---YYLHHPDLA---AGTSHFRLTIEEG--QKIVASLKEKISGLCQPFYIL 311
              Y  H P L      T++  L + EG  +K +     + + +   FYI+
Sbjct: 230 VTRYRDHLPHLEIFNEKTANEALDLVEGLQEKCLEKFGSRFAFMSDEFYII 280


>gi|197302998|ref|ZP_03168046.1| hypothetical protein RUMLAC_01724 [Ruminococcus lactaris ATCC
           29176]
 gi|197297853|gb|EDY32405.1| hypothetical protein RUMLAC_01724 [Ruminococcus lactaris ATCC
           29176]
          Length = 456

 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 47/206 (22%)

Query: 54  DPIARQFIPQKEELNILPEEREDPIGDNNHSPLK-----GIVHRYPDRILLKLLHVCPVY 108
           D    QF  + EEL +L E+   P G+     ++     G+   + +  L+   H C   
Sbjct: 38  DIFDYQFYVEAEELVVLVEK---PDGEQWEMEIEKEADEGLGIEFEEG-LMDEYHSCHNK 93

Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           C FCF  +M    + T L  KD ++ L+++Q            G+ + L++   + V + 
Sbjct: 94  CIFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYITLTNMSDKDVERI 140

Query: 169 LRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227
           +RY       R     PI +  Q  NPEL +C           +H      F+ EA+  +
Sbjct: 141 VRY-------RLE---PINISFQTTNPEL-RCK---------MLHNR----FAGEALKKV 176

Query: 228 SRLANAGIILLSQSVLLKGINDDPEI 253
             L   GI +  Q VL KG+ND  E+
Sbjct: 177 DILYQGGIEMNGQIVLCKGVNDGEEL 202


>gi|21960794|gb|AAM87352.1|AE013983_5 O2-independent coproporphyrinogen III oxidase [Yersinia pestis KIM
           10]
 gi|45434742|gb|AAS60303.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Microtus str. 91001]
          Length = 459

 Score = 39.3 bits (90), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGT-----VLSSKDTE 132
           D N S  +  V RYP R L   +H+  C   C FC   ++V  Q+       V+  K+  
Sbjct: 37  DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIR 96

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
              A    + Q+ ++ + GG P  L+  ++  ++  LR  +H   L    +   VDP+ I
Sbjct: 97  QRAALFTGR-QVSQMHWGGGTPTYLNKTQISHLMTVLR--EHFDFLPDAEQSIEVDPREI 153

Query: 193 NPELIQCLKEAG 204
             +++  L+  G
Sbjct: 154 ELDVLDHLRAEG 165


>gi|194334917|ref|YP_002016777.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris
           aestuarii DSM 271]
 gi|194312735|gb|ACF47130.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris
           aestuarii DSM 271]
          Length = 336

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 84  SPLKGIVHRYP---DRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQ 139
           SPLK +  RY    D + L +   C + C +C R E  V + +G  LS  +  + LA + 
Sbjct: 10  SPLKPLSDRYRRTVDYVRLAVTSQCNLRCMYCMREEHTVYNPEGEALSGDEIVSMLAVLA 69

Query: 140 EKSQIWEVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQI 177
            +  + +V +TGG+PL+     RL +  K L  I+ V +
Sbjct: 70  -RMGVSKVRYTGGEPLLRQDIVRLVRDAKALEGIETVSL 107


>gi|51594379|ref|YP_068570.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           32953]
 gi|108809512|ref|YP_653428.1| coproporphyrinogen III oxidase [Yersinia pestis Antiqua]
 gi|108810414|ref|YP_646181.1| coproporphyrinogen III oxidase [Yersinia pestis Nepal516]
 gi|145601123|ref|YP_001165199.1| coproporphyrinogen III oxidase [Yersinia pestis Pestoides F]
 gi|150260915|ref|ZP_01917643.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           CA88-4125]
 gi|153950356|ref|YP_001399025.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP
           31758]
 gi|161484735|ref|NP_671101.2| coproporphyrinogen III oxidase [Yersinia pestis KIM 10]
 gi|161511483|ref|NP_991426.2| coproporphyrinogen III oxidase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|162421654|ref|YP_001604667.1| coproporphyrinogen III oxidase [Yersinia pestis Angola]
 gi|165926183|ref|ZP_02222015.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165940226|ref|ZP_02228756.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011477|ref|ZP_02232375.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166213708|ref|ZP_02239743.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167402108|ref|ZP_02307585.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167418791|ref|ZP_02310544.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167427043|ref|ZP_02318796.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|167470513|ref|ZP_02335217.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           FV-1]
 gi|170026399|ref|YP_001722904.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis YPIII]
 gi|186893366|ref|YP_001870478.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis PB1/+]
 gi|218927242|ref|YP_002345117.1| coproporphyrinogen III oxidase [Yersinia pestis CO92]
 gi|229836130|ref|ZP_04456298.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis Pestoides A]
 gi|229841951|ref|ZP_04462106.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229900596|ref|ZP_04515720.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis Nepal516]
 gi|294502130|ref|YP_003566192.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
 gi|51587661|emb|CAH19261.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis IP 32953]
 gi|108774062|gb|ABG16581.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Nepal516]
 gi|108781425|gb|ABG15483.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis Antiqua]
 gi|115345853|emb|CAL18711.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           CO92]
 gi|145212819|gb|ABP42226.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis
           Pestoides F]
 gi|149290323|gb|EDM40400.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           CA88-4125]
 gi|152961851|gb|ABS49312.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis IP 31758]
 gi|162354469|gb|ABX88417.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           Angola]
 gi|165911858|gb|EDR30505.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165922043|gb|EDR39220.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989623|gb|EDR41924.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166205110|gb|EDR49590.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166962785|gb|EDR58806.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167048483|gb|EDR59891.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167053970|gb|EDR63801.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169752933|gb|ACA70451.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis YPIII]
 gi|186696392|gb|ACC87021.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia
           pseudotuberculosis PB1/+]
 gi|229681935|gb|EEO78027.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis Nepal516]
 gi|229690261|gb|EEO82315.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229706578|gb|EEO92584.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis Pestoides A]
 gi|262360208|gb|ACY56929.1| coproporphyrinogen III oxidase [Yersinia pestis D106004]
 gi|262364155|gb|ACY60712.1| coproporphyrinogen III oxidase [Yersinia pestis D182038]
 gi|294352589|gb|ADE62930.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003]
          Length = 457

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGT-----VLSSKDTE 132
           D N S  +  V RYP R L   +H+  C   C FC   ++V  Q+       V+  K+  
Sbjct: 35  DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIR 94

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
              A    + Q+ ++ + GG P  L+  ++  ++  LR  +H   L    +   VDP+ I
Sbjct: 95  QRAALFTGR-QVSQMHWGGGTPTYLNKTQISHLMTVLR--EHFDFLPDAEQSIEVDPREI 151

Query: 193 NPELIQCLKEAG 204
             +++  L+  G
Sbjct: 152 ELDVLDHLRAEG 163


>gi|57641163|ref|YP_183641.1| molybdenum cofactor biosynthesis protein A [Thermococcus
           kodakarensis KOD1]
 gi|57159487|dbj|BAD85417.1| probable molybdenum cofactor biosynthesis protein A [Thermococcus
           kodakarensis KOD1]
          Length = 419

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 33/184 (17%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144
           G++ R  + I ++ +  C + C FC   E   S+   +    D +  + +  E ++I   
Sbjct: 108 GLIDRGTNLIQVRGVSGCNLSCVFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167

Query: 145 -WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQ 198
             E    G G+PLI   +           ++ VQ LR H  V ++  Q     +N +L++
Sbjct: 168 GLEAHLDGQGEPLIYPFR-----------VELVQALREHPNVSVISMQSNGTLLNDKLVE 216

Query: 199 CLKEAG-KPVYIAIHANHP-----------YEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            L EAG   V ++IH+  P           Y+  +  +     L NAGI +L   V++ G
Sbjct: 217 ELAEAGLDRVNLSIHSLDPDKAKMLMGRKDYDL-QHVLDMAEALVNAGIDVLIAPVIIFG 275

Query: 247 INDD 250
           +ND+
Sbjct: 276 VNDN 279


>gi|182419316|ref|ZP_02950569.1| heme biosynthesis [Clostridium butyricum 5521]
 gi|237667748|ref|ZP_04527732.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376956|gb|EDT74527.1| heme biosynthesis [Clostridium butyricum 5521]
 gi|237656096|gb|EEP53652.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 453

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 4/81 (4%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIF 149
           Y   I L ++H C + C++CF  E      G V+S +  + A+ Y+ ++S   +  E+  
Sbjct: 93  YIKAICLNVIHGCNLRCKYCFADEGEYHGHGGVMSVETAKKAIDYVIKRSGPRKNIEIDL 152

Query: 150 TGGDPLILSHKRLQKVLKTLR 170
            GG+P ++  K +++++K  R
Sbjct: 153 FGGEPTLIMDK-IKEIIKYAR 172


>gi|311281670|ref|YP_003943901.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
           cloacae SCF1]
 gi|308750865|gb|ADO50617.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter
           cloacae SCF1]
          Length = 457

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 18/136 (13%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
           D   +  +  V RYP+R L   +H+  C   C FC   ++V  Q+       D       
Sbjct: 35  DFGDAAFQLAVSRYPERSLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADRYLDVLEQEIL 94

Query: 132 -EAALAYIQEKSQI-WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI-VD 188
             A L   +  SQ+ W     GG P  L+  ++ ++++ LR   H    R  + + I VD
Sbjct: 95  HRAPLFNGRHVSQLHW----GGGTPTYLNKAQISRLMRLLRENFH---FRDDAEISIEVD 147

Query: 189 PQRINPELIQCLKEAG 204
           P+ I  +++ CL++ G
Sbjct: 148 PREIELDVLDCLRQEG 163


>gi|114567979|ref|YP_755133.1| radical SAM protein [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114338914|gb|ABI69762.1| radical SAM domain protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 458

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIFTGGD 153
           + L + H C + C +CF  +     +  ++S +  +AAL ++ E+S   Q  EV F GG+
Sbjct: 104 LCLNMAHSCNMKCSYCFASQGNFGLRPALMSLETAKAALDFLLEQSGERQNLEVDFFGGE 163

Query: 154 PLIL 157
           PL++
Sbjct: 164 PLLV 167


>gi|229591974|ref|YP_002874093.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens SBW25]
 gi|229363840|emb|CAY51294.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas
           fluorescens SBW25]
          Length = 460

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 32/218 (14%)

Query: 45  NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
           +L  P   + P A QF  Q    ++L   RE         PL   VH          +  
Sbjct: 16  DLAGPRYTSYPTAVQFGSQVGTFDLLHALRE---SRKAARPLSLYVH----------VPF 62

Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
           C   C +C   +++   +G  L       ++ +    ++  K  + ++ F GG P  LSH
Sbjct: 63  CANICYYCACNKVITKDRGRALPYLQRLEQEIQLVACHLDPKQPVEQLHFGGGTPTFLSH 122

Query: 160 KRLQKVLKTLRYIKHVQILRFHS--RVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
             L++V+  LR  +H  +L   S      +DP+  +   +  L+E G   V I +    P
Sbjct: 123 DELRQVMNCLR--QHFNLLDDDSGDYGIEIDPREADWATMGLLRELGFNRVSIGLQDLDP 180

Query: 217 YEFSEEAIAAISRLAN----AGIILLSQSVLLKGINDD 250
                E   A++RL +      +I  ++++  + IN D
Sbjct: 181 -----EVQRAVNRLQSLEETRAVIDAARTLQFRSINVD 213


>gi|312792558|ref|YP_004025481.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor kristjanssonii 177R1B]
 gi|312877157|ref|ZP_07737127.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311796057|gb|EFR12416.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|312179698|gb|ADQ39868.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor kristjanssonii 177R1B]
          Length = 231

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 29/191 (15%)

Query: 93  YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           YP +I        C   C FC+  ++V + KG+ +   D      Y+ ++  I + V  T
Sbjct: 13  YPKKIAATCFFGGCNFSCPFCYNSQLV-NFKGSFM---DDSIFFEYLDKRKGIVDAVCIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P  L+ + L + +K ++           S +  +D     PE++Q L +AG   Y+A
Sbjct: 69  GGEP-TLNEEYLTEFIKKIKN---------RSLLVKLDTNGSRPEVLQRLLDAGLLDYVA 118

Query: 211 IHANHPYE-------FS--EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           +    P E       FS  ++   ++  L N+ I    ++ + K ++   +IL N+ R  
Sbjct: 119 MDVKAPLEKYPQITGFSDIDKIKKSVEILKNSNIDYEFRTTVNKNLHTVEDIL-NIARLL 177

Query: 262 VELR---IKPY 269
            + R   IKPY
Sbjct: 178 KDSRLYVIKPY 188


>gi|312128493|ref|YP_003993367.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311778512|gb|ADQ07998.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 231

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 29/191 (15%)

Query: 93  YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           YP +I        C   C FC+  ++V + KG+ +   D      Y+ ++  I + V  T
Sbjct: 13  YPKKIAATCFFGGCNFSCPFCYNSDLV-NFKGSFM---DDSIFFEYLDKRKGIVDAVCIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P  L+ + L + +K ++           S +  +D     PE++Q L +AG   Y+A
Sbjct: 69  GGEP-TLNEEYLTEFIKKIKN---------RSLLVKLDTNGSRPEVLQRLLDAGLLDYVA 118

Query: 211 IHANHPYE-------FS--EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           +    P E       FS  ++   +I  L N+ I    ++ + K ++   +IL N+ R  
Sbjct: 119 MDVKAPLEKYPQITGFSDVDKIRRSIEILKNSNIDYEFRTTVNKNLHTVEDIL-NIARLL 177

Query: 262 VELR---IKPY 269
            + R   IKPY
Sbjct: 178 KDSRLYVIKPY 188


>gi|326407735|gb|ADZ64806.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis
           subsp. lactis CV56]
          Length = 275

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 15/113 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P ++ + L + C   C +CF +EM      T   SK+    +AY  EK ++  V   GGD
Sbjct: 10  PIKVYIYLTNHCHYECDYCFLKEM--KMLNTKEISKEDLEKIAYYLEKYKVPLVAICGGD 67

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--ELIQCLKEAG 204
           P++  H +L         I  VQ+L  H   P +    ++   + +  LK AG
Sbjct: 68  PIL--HPKL---------IDFVQLLSEHKNYPTIATNAVDVSYKYLYQLKSAG 109


>gi|281492812|ref|YP_003354792.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis
           subsp. lactis KF147]
 gi|281376464|gb|ADA65950.1| Fe-S oxidoreductase, radical SAM superfamily [Lactococcus lactis
           subsp. lactis KF147]
          Length = 275

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 15/113 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P ++ + L + C   C +CF +EM      T   SK+    +AY  EK ++  V   GGD
Sbjct: 10  PIKVYIYLTNHCHYECDYCFLKEM--KMLNTKEISKEDLEKIAYYLEKYKVPLVAICGGD 67

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--ELIQCLKEAG 204
           P++  H +L         I  VQ+L  H   P +    ++   + +  LK AG
Sbjct: 68  PIL--HPKL---------IDFVQLLSEHKNYPTIATNAVDVSYKYLYQLKSAG 109


>gi|251798763|ref|YP_003013494.1| radical SAM protein [Paenibacillus sp. JDR-2]
 gi|247546389|gb|ACT03408.1| Radical SAM domain protein [Paenibacillus sp. JDR-2]
          Length = 379

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 16/112 (14%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--EVIFTGGDPLILSHK 160
           ++C VYCRFC      GS +G VLS+   E  L  IQE   +   E++  GG    L   
Sbjct: 63  NICDVYCRFCAFYRAPGSNEGYVLSN---ETILNKIQETIDVGGTEILMQGGTNPNLPFS 119

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEAG 204
               +L+ ++  +H   +  HS  P  + Q++          E+I+ L EAG
Sbjct: 120 YYTDLLREIK--QHFPDITMHSFSP-AEIQKMKEVSEGLSLDEVIRQLNEAG 168


>gi|254000035|ref|YP_003052098.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp.
           SIP3-4]
 gi|253986714|gb|ACT51571.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp.
           SIP3-4]
          Length = 336

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 21/197 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R  D I L +   C   C +C   +M    +  VLS ++  A L  I  +  + +V  TG
Sbjct: 17  RKVDYIRLSITDRCDFRCVYCMAEDMTFLPRDEVLSLEEC-ARLVKIFVQMGVSKVRITG 75

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
           G+PL+   K  Q + + + ++  ++ L   +    ++ Q         L++AG K + I+
Sbjct: 76  GEPLV--RKNAQWLFEEIGHLPGLKELVVTTNGSQLEHQ------AAALRQAGVKRINIS 127

Query: 211 IHANHPYEFSE--------EAIAAISRLANAGIILLS-QSVLLKGINDDPEILANLMRTF 261
           + + +   F +        + +  I    +AG   +   SV+++G+NDD  +  +L+R  
Sbjct: 128 VDSLNADRFRKITRVGDLSKVLRGIQAAKDAGFDNIKLNSVIMRGVNDDEAL--DLLRFA 185

Query: 262 VELRIKPYYLHHPDLAA 278
           ++ +I   Y+    L A
Sbjct: 186 IDQQIDISYIEEMPLGA 202


>gi|218283069|ref|ZP_03489164.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989]
 gi|218216138|gb|EEC89676.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989]
          Length = 464

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 7/101 (6%)

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +  KE+  +  E+  +P+     +   G++      + L + H C + C +CF  +  
Sbjct: 65  QILELKEQGRLFSEDTYEPMAGQLKAKTSGVIKA----LCLHIAHTCNLNCSYCFASQGK 120

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQI---WEVIFTGGDPLI 156
                 ++S +  + AL ++ E S      EV F GG+PL+
Sbjct: 121 YHGDRALMSFETGKRALDFLVENSGTRRNLEVDFFGGEPLM 161


>gi|91772361|ref|YP_565053.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM
           6242]
 gi|91711376|gb|ABE51303.1| Radical SAM family protein [Methanococcoides burtonii DSM 6242]
          Length = 206

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 37/197 (18%)

Query: 78  IGDNNHSPLKGI---VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
           IGD  +  + G+    +   D + L + + C   C FC R    G     +  +K  E +
Sbjct: 2   IGDKLNGDIAGVGTLCYEGHDNLYLNITNRCSANCVFCIRDISDGIYGSNLRLTK--EPS 59

Query: 135 LAYIQEK-----SQIW-EVIFTG-GDPLILSHKRLQKVLKTLRYIK-HVQILRFHSR--V 184
           L  I +K      +I+ EV+FTG G+P I    RL  VL+  R++K H   +R  +    
Sbjct: 60  LDEILDKLGSLDLEIYREVVFTGFGEPTI----RLDIVLEVTRWLKEHGMKVRIDTNGHA 115

Query: 185 PIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSE----------EAIAAISRLA-N 232
            ++ P+R   ++I  LK+AG   V ++++A     + E          EA+   ++ A N
Sbjct: 116 QLLHPER---DVISELKDAGLDEVSVSLNAESKERYDELCQPDLENAYEAMLEFTKEAVN 172

Query: 233 AGIILLSQSVLLKGIND 249
           AGI      + + G ND
Sbjct: 173 AGI---ESRMTVVGFND 186


>gi|325479346|gb|EGC82442.1| six-Cys-in-45 modification radical SAM protein [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 460

 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 10/117 (8%)

Query: 46  LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI---LLKLL 102
           +IN ++ ND    QF+   EE+N L  E      D+ +  L   +   P  I    L + 
Sbjct: 47  IINKYDINDD---QFLEAYEEVNELVNEGL-LFSDDIYEDLSIDITNKPTTIKALCLNVA 102

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WEVIFTGGDPLI 156
           H C + C +CF +    S    +++ +   +A+ ++ E S      ++ F GG+PL+
Sbjct: 103 HTCNLSCEYCFAKGGKYSGPDAIMTEEVARSAIDFLLENSGSHYNLDIDFFGGEPLL 159


>gi|315924152|ref|ZP_07920378.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622554|gb|EFV02509.1| oxygen-independent coproporphyrinogen III oxidase 2
           [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 512

 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 11/140 (7%)

Query: 104 VCPVYCRFCFRREMVGSQKGTV-------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +CP  C +C     +  +KG +       L S+  +     I+ + ++  +   GG P +
Sbjct: 196 ICPAKCSYCSFVSTIADKKGVLCADYLQGLISEIRQMGAWMIKRQLRVDTLYIGGGTPSV 255

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           LS ++++++L  L+  + V             P+   PE +  LK  G    +     +P
Sbjct: 256 LSVRQIERLLAALKESRLVHSKLREFTFEAGRPETTTPEKLAVLKAFG----VDRLCLNP 311

Query: 217 YEFSEEAIAAISRLANAGII 236
              + E +AA+ R   A  I
Sbjct: 312 QSMNNETLAAVGRFHTAADI 331


>gi|296188253|ref|ZP_06856645.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
           carboxidivorans P7]
 gi|296047379|gb|EFG86821.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
           carboxidivorans P7]
          Length = 262

 Score = 38.5 bits (88), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 23/131 (17%)

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           +I ++ +TGG+PLIL  K +  ++     I+ ++       + I     +  +L   LKE
Sbjct: 2   EIKKIRYTGGEPLIL--KNISSLISETSKIQQIK------DIAITTNGILLYDLADELKE 53

Query: 203 AG-KPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
           AG K V I++      +FS         + + AI +  + GI +   +VL+KGINDD   
Sbjct: 54  AGLKRVNISLDTLKEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDDE-- 111

Query: 254 LANLMRTFVEL 264
               ++ F++L
Sbjct: 112 ----IKNFIDL 118


>gi|313206128|ref|YP_004045305.1| radical sam domain protein [Riemerella anatipestifer DSM 15868]
 gi|312445444|gb|ADQ81799.1| Radical SAM domain protein [Riemerella anatipestifer DSM 15868]
 gi|315022935|gb|EFT35958.1| Queuosine Biosynthesis QueE Radical SAM [Riemerella anatipestifer
           RA-YM]
          Length = 209

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 9/132 (6%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
           L  C V C +C  +E        ++ +++  A +A    K+    ++ TGG+PL+ + + 
Sbjct: 40  LGGCDVGCHWCDVKESWDPNLHPLMDAEEV-AQIAANHSKT----IVLTGGEPLMWNLEI 94

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPY 217
           L K LK L    H++    +     +D   ++P+     KE+       + + I  NH +
Sbjct: 95  LTKKLKDLGCTIHIETSGAYEISGHIDWVCLSPKKTGLPKESIYAKANELKVIIFNNHDF 154

Query: 218 EFSEEAIAAISR 229
           +F+EE  + +S+
Sbjct: 155 KFAEEQASKVSQ 166


>gi|145220160|ref|YP_001130869.1| GTP cyclohydrolase subunit MoaA [Prosthecochloris vibrioformis DSM
           265]
 gi|145206324|gb|ABP37367.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeovibrioides DSM
           265]
          Length = 351

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 30/260 (11%)

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
           N   PL    HR      + +   C + C +C R E      G    S      L  +  
Sbjct: 22  NTSPPLSDTFHRQVSYARIAVTGACNLRCAYCMREEHESDSSGRTKMSFTELTTLISVLA 81

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           ++ I ++  TGG+PL+     +  ++ T +    ++ +   +   ++D + ++  L   +
Sbjct: 82  EAGITKIRLTGGEPLLRGD--IADLVATAKNTPGIKTVSITTNGLLLD-RHLDALLSAGI 138

Query: 201 KEAGKPV-------YIAIHANHPYEFSEEAIAAISRLAN-AGIILLSQSVLLKGINDDP- 251
                 +       ++AI   + +E ++   A + RL +   + L    V+L+GINDD  
Sbjct: 139 DAVNMSIDSLRADRFLAITRRNEFERTK---ANLDRLLSLESVPLKINVVMLRGINDDEI 195

Query: 252 EILANLMRT------FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL---KEKIS 302
           +   NL R       F+EL  +P+  H       T  F L +++ + ++ S     E++ 
Sbjct: 196 KDFTNLTREHPISVRFMEL--QPFDDHQ---IWRTGKF-LGMDKIRGLLQSAHPGMEELQ 249

Query: 303 GLCQPFYILDLPGGYGKVKI 322
           G    ++   LPG  G   I
Sbjct: 250 GSGTEYFSFTLPGYRGSWAI 269


>gi|261403228|ref|YP_003247452.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
 gi|261370221|gb|ACX72970.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
          Length = 243

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 28/171 (16%)

Query: 105 CPVYCRFCFRR--------EMVGS----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           CP+ C +C           E   S    +K  + S +D   A+  ++    ++ V FTGG
Sbjct: 28  CPLNCLYCDEEHKKHVNLVEQYPSSGKFEKQNLESEEDIIKAVNKLK-TPDLFSVSFTGG 86

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILR----FHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           +PL L HK ++++ K L+ + +   L     F  RV   D   I+ +L    K  G+  Y
Sbjct: 87  EPL-LYHKEIKEISKILKNLGYRTFLESNGIFPERVFHFDIASIDIKLKDHFKNIGEEEY 145

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG--INDDPEILANL 257
             I+ N         +  I +  N G  + ++ V+ K   IND  EI  +L
Sbjct: 146 KKIYKNE--------LKTIKKFYNMGTDVYAKIVITKDSKINDLVEISKDL 188


>gi|222100234|ref|YP_002534802.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359]
 gi|221572624|gb|ACM23436.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359]
          Length = 437

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 18/95 (18%)

Query: 80  DNNHSPLKGI-----VHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-- 129
           D+N   L+ +      +RY DR L   + L H C   C +C+++ ++    G+ +S K  
Sbjct: 48  DDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCVYCYQK-VIHISSGSYISEKVQ 106

Query: 130 -----DTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
                D E  L Y  +K  +  V F GG+PL+L  
Sbjct: 107 SNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEE 139


>gi|148270585|ref|YP_001245045.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
 gi|170289289|ref|YP_001739527.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
 gi|281412894|ref|YP_003346973.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
 gi|147736129|gb|ABQ47469.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
 gi|170176792|gb|ACB09844.1| Radical SAM domain protein [Thermotoga sp. RQ2]
 gi|281373997|gb|ADA67559.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
          Length = 454

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 18/95 (18%)

Query: 80  DNNHSPLKGI-----VHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-- 129
           D+N   L+ +      +RY DR L   + L H C   C +C+++ ++    G+ +S K  
Sbjct: 65  DDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCVYCYQK-VIHISSGSYISEKVQ 123

Query: 130 -----DTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
                D E  L Y  +K  +  V F GG+PL+L  
Sbjct: 124 SNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEE 156


>gi|257075637|ref|ZP_05569998.1| molybdenum cofactor biosynthesis protein A [Ferroplasma acidarmanus
           fer1]
          Length = 315

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 28/166 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           ++L  +C  +C FC    M G+++     + +    +  +     + ++ FTGG+PL L 
Sbjct: 23  IQLNAICNFHCIFC---HMEGTERSMQYMTPEQIENVVAVAASHGVNKIKFTGGEPL-LR 78

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPY 217
              L+ V +T ++I           + +       P+L + LKEAG   V I++HA   Y
Sbjct: 79  EDILEIVRRTRKHIT--------GNISLTTNGVELPKLAKGLKEAGLDRVNISMHAIDEY 130

Query: 218 EFS-------------EEAIAAISRLANAGIILLSQSVLLKGINDD 250
            F              ++ I A +R A  G I ++  VL+K IN+D
Sbjct: 131 NFHFITDTKKNFLPIVKQGIQA-ARDAGLGPIKIN-FVLMKNINED 174


>gi|320017067|gb|ADW00639.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent,
           oxygen-independent [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 456

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 17/135 (12%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGT-----VLSSKD-- 130
           D N S  +  V RYP R L   +H+  C   C FC   ++V  Q+       V+  K+  
Sbjct: 35  DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIR 94

Query: 131 TEAALAYIQEKSQI-WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
             AAL   ++ SQ+ W     GG P  L+  ++  ++  LR  +H   L    +   VDP
Sbjct: 95  QRAALFTGRQVSQMHW-----GGTPTYLNKTQISHLMTVLR--EHFDFLPDAEQSIEVDP 147

Query: 190 QRINPELIQCLKEAG 204
           + I  +++  L+  G
Sbjct: 148 REIELDVLDHLRAEG 162


>gi|302670902|ref|YP_003830862.1| Fe-S oxidoreductase [Butyrivibrio proteoclasticus B316]
 gi|302395375|gb|ADL34280.1| Fe-S oxidoreductase [Butyrivibrio proteoclasticus B316]
          Length = 458

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 53/217 (24%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI-------LL 99
           IN     D    Q++ Q E L++L  +       +    L  I   Y + +       L+
Sbjct: 38  INDQELEDVFDFQYLVQDEHLDVLIRKA------DGEEWLLDIDKDYDEDLGIEFENGLM 91

Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
                C   C FCF  +M    + T L  KD ++ L+++Q            G+ + L++
Sbjct: 92  DDYRSCSNKCIFCFIDQMPKGMRKT-LYFKDDDSRLSFLQ------------GNYVTLTN 138

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
              + + + L+Y  H+         PI +  Q  NPEL +C K  G              
Sbjct: 139 MSDKDIDRILKY--HLS--------PINISFQTTNPEL-RC-KMLGN------------R 174

Query: 219 FSEEAIAAISRLA--NAGIILLSQSVLLKGINDDPEI 253
           F+ EA+  + RL     GI +  Q VL KG+ND  E+
Sbjct: 175 FAGEALKKVDRLCAPGTGIEINGQIVLCKGVNDGDEL 211


>gi|78358007|ref|YP_389456.1| ribosomal RNA large subunit methyltransferase N [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
 gi|123727640|sp|Q30X35|RLMN_DESDG RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|78220412|gb|ABB39761.1| 23S rRNA m(2)A-2503 methyltransferase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 358

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 30/177 (16%)

Query: 105 CPVYCRFC------FRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLI 156
           C + C FC      F R M  S+  G VL +++    L  + E+  +  ++F G G+PL+
Sbjct: 112 CAMGCTFCATGTLGFERNMTMSEILGQVLVAREY---LNDVAERPILRNLVFMGMGEPLL 168

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
                L +++++L  +     L+F  R   V    +NPE ++ L E+G   Y+A+  + P
Sbjct: 169 ----NLDEIMRSLHTLNSELGLQFSPRRITVSTCGVNPEGLRRLGESG-LAYLAVSLHAP 223

Query: 217 Y-EFSEEAIAAISRLANAGIILLSQS-------------VLLKGINDDPEILANLMR 259
             E     +   +R      I   QS             +LL G+ND  E    L+R
Sbjct: 224 TQELRRTIMPKAARWELNDFIEALQSYPLKTRERITFEYLLLGGVNDSLEHAKQLVR 280


>gi|255523321|ref|ZP_05390291.1| molybdenum cofactor biosynthesis protein A [Clostridium
           carboxidivorans P7]
 gi|255512975|gb|EET89245.1| molybdenum cofactor biosynthesis protein A [Clostridium
           carboxidivorans P7]
          Length = 318

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 27/184 (14%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIF 149
           R  D + + L   C + C +C   +  G  K         E  L  I+      I ++ +
Sbjct: 7   RNIDYLRISLTDRCNLRCIYCMPEQ--GVSKKCHEDVIRFEEVLKIIKSAVPLGIKKIRY 64

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
           TGG+PLIL  K +  ++     I+ ++       + I     +  +L   LKEAG K V 
Sbjct: 65  TGGEPLIL--KNISSLISETSKIQQIK------DIAITTNGILLYDLADELKEAGLKRVN 116

Query: 209 IAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
           I++      +FS         + + AI +  + GI +   +VL+KGINDD       ++ 
Sbjct: 117 ISLDTLKEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDDE------IKN 170

Query: 261 FVEL 264
           F++L
Sbjct: 171 FIDL 174


>gi|217969710|ref|YP_002354944.1| coproporphyrinogen III oxidase [Thauera sp. MZ1T]
 gi|217507037|gb|ACK54048.1| oxygen-independent coproporphyrinogen III oxidase [Thauera sp.
           MZ1T]
          Length = 473

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 26/132 (19%), Positives = 62/132 (46%), Gaps = 13/132 (9%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
           C   C +C   +++    G         +K+ E   A ++   Q+ ++   GG P  LSH
Sbjct: 77  CNTICYYCACNKIITKDHGRSAKYLKYLAKEIEMQAACLEGSRQVTQLHLGGGTPTFLSH 136

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYE 218
             +++++  +R  +H  ++        VDP++++ + ++ L E G   + + +      +
Sbjct: 137 DEMRELMAAVR--EHFTLVPNGEYSIEVDPRKVDFDTVKLLAELGFNRMSVGVQ-----D 189

Query: 219 FSEEAIAAISRL 230
           F+E+   A++R+
Sbjct: 190 FAEDVQQAVNRI 201


>gi|192290582|ref|YP_001991187.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
           palustris TIE-1]
 gi|226707378|sp|B3QCQ7|MOAA_RHOPT RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|192284331|gb|ACF00712.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
           palustris TIE-1]
          Length = 344

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 17/184 (9%)

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           P+     R  D + + +   C   C +C   +M    +  +L+ ++ +   +    K  +
Sbjct: 15  PMTDPFGRTIDYLRVSITDRCDFRCVYCMAEDMTFLPRADLLTLEELDRLCSAFIAKG-V 73

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
            ++  TGG+PL+   + +  ++++L R++K   +             R   EL  C    
Sbjct: 74  RKLRLTGGEPLV--RRNMMSLVRSLSRHLKTGALDELTLTTNGSQLARFAAELADC---G 128

Query: 204 GKPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            + V +++    P EF         +  +A I+    AG+ +   SV+LKG N+D   + 
Sbjct: 129 VRRVNVSLDTLDPDEFRRITRWGDLDRVLAGINAARAAGLAVKINSVVLKGSNEDE--IP 186

Query: 256 NLMR 259
           +LMR
Sbjct: 187 SLMR 190


>gi|329961551|ref|ZP_08299632.1| radical SAM domain protein [Bacteroides fluxus YIT 12057]
 gi|328531763|gb|EGF58592.1| radical SAM domain protein [Bacteroides fluxus YIT 12057]
          Length = 458

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 7/71 (9%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTG 151
           D + L + H C + C++CF   +    + +V+S      A+AY+ E    S+ + + F G
Sbjct: 82  DMLTLNVTHGCNMSCKYCFASTL--QDRKSVMSLSVVRKAIAYMLEGNPDSERYTIYFFG 139

Query: 152 GDPLILSHKRL 162
           G+PL+  HK+ 
Sbjct: 140 GEPLL--HKQF 148


>gi|225424671|ref|XP_002262749.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296086557|emb|CBI32146.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 24/166 (14%)

Query: 105 CPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161
           C + C+FC+   M  ++  T   +  +   A   +  E   I  V+F G G+P       
Sbjct: 190 CAMNCQFCYTGRMGLTRHLTAAEIVEQAVYARRLFSSEVGSITNVVFMGMGEPF----HN 245

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
           ++ V+K    + H Q L F  R   V    + P+L   L+E+     +A+  N   +   
Sbjct: 246 IESVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLKHFLRESN--CALAVSLNATTDEVR 303

Query: 222 EAIAAISRLANAGIIL---------------LSQSVLLKGINDDPE 252
             +  I+R  N  ++L               L + V+L G+ND  E
Sbjct: 304 NWVMPINRKYNLSLLLQTLREELRSKHNYKVLFEYVMLAGVNDSLE 349


>gi|78776805|ref|YP_393120.1| coproporphyrinogen III oxidase [Sulfurimonas denitrificans DSM
           1251]
 gi|78497345|gb|ABB43885.1| Oxygen-independent coproporphyrinogen III oxidase HemN
           [Sulfurimonas denitrificans DSM 1251]
          Length = 455

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 28/145 (19%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           L  C   C FC    +  S++  +L       ++ +   +++     + ++ F GG P  
Sbjct: 54  LPFCKNACYFCGCNVVFTSKEDKMLRYLEYLKRELKILSSFVDCNRSVIQMHFGGGTPTF 113

Query: 157 LSHKRLQKVLKTLR-----YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG------- 204
            S ++L +V+K +R     ++K  +I         +DP+ I+ + ++ L + G       
Sbjct: 114 FSAEQLDEVIKEIRHFFPNFVKEAEI------SCEIDPRHIDEDQMRVLSQNGFNRVSFG 167

Query: 205 -----KPVYIAIHANHPYEFSEEAI 224
                + V IA+H   PYE ++ A+
Sbjct: 168 IQDFNEKVQIAVHRVQPYEITKYAM 192


>gi|115438803|ref|NP_001043681.1| Os01g0640800 [Oryza sativa Japonica Group]
 gi|113533212|dbj|BAF05595.1| Os01g0640800 [Oryza sativa Japonica Group]
 gi|218188735|gb|EEC71162.1| hypothetical protein OsI_03021 [Oryza sativa Indica Group]
 gi|222618932|gb|EEE55064.1| hypothetical protein OsJ_02780 [Oryza sativa Japonica Group]
          Length = 405

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 29/177 (16%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALA---YIQEKSQIWEVIFTG-GDPLILSHK 160
           C + C+FCF   M G +K    +    +A  A   +  E   I  V+F G G+PL     
Sbjct: 157 CAMNCQFCFTGRM-GLRKHLSTAEIVEQAVFARRLFSDEFGSITNVVFMGMGEPL----H 211

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
            +  VLK    +   Q L+F  R   V    + P++ + L+E+     +A+  N   +  
Sbjct: 212 NIDNVLKASAIMVDEQGLQFSPRKVTVSTSGLVPQIKRFLQESN--CALAVSLNATTDEV 269

Query: 221 EEAIAAISRLANAGIIL---------------LSQSVLLKGIN---DDPEILANLMR 259
              I  I+R  N  ++L                 + V+L G+N   DD + L +L+R
Sbjct: 270 RNWIMPINRKYNLSLLLGTLREEIRLKKKYKVFFEYVMLAGVNDSVDDAKRLVDLVR 326


>gi|238794560|ref|ZP_04638168.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           intermedia ATCC 29909]
 gi|238726140|gb|EEQ17686.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           intermedia ATCC 29909]
          Length = 459

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 12/133 (9%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKG------TVLSSKDT 131
           D N S  +  V RYP R L   +H+  C   C FC   ++V  Q+        VL  +  
Sbjct: 37  DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIC 96

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
           + A  +     Q+ ++ + GG P  L+ K++  ++  LR   +   L    +   VDP+ 
Sbjct: 97  QRATFFA--GRQVSQMHWGGGTPTYLNKKQITHLMNLLR--DNFDFLPGAEQSIEVDPRE 152

Query: 192 INPELIQCLKEAG 204
           I  +++  L+  G
Sbjct: 153 IELDVLDHLRAEG 165


>gi|150018969|ref|YP_001311223.1| radical SAM domain-containing protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905434|gb|ABR36267.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 453

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 10/113 (8%)

Query: 65  EELNILPEE----REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +E+  L EE     ED   +  HS +      Y   I L ++H C + C++CF  E    
Sbjct: 63  DEIQELAEEGILYSEDQYEEIAHSSMDD--RDYIKAICLNVIHGCNLRCKYCFADEGEYH 120

Query: 121 QKGTVLSSKDTEAALAYIQEKS---QIWEVIFTGGDPLILSHKRLQKVLKTLR 170
             G V+S+   + A+ Y+ ++S   +  E+   GG+P ++    +++++K  R
Sbjct: 121 GHGGVMSADTAKKAIDYVIKRSGPRKNIEIDLFGGEPTLIMDT-IKEIIKYAR 172


>gi|291560706|emb|CBL39506.1| Arylsulfatase regulator (Fe-S oxidoreductase) [butyrate-producing
           bacterium SSC/2]
          Length = 458

 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKG--TVLSSKDTEAALAYIQEKS---QIWEVIFTG 151
           + L + H C + CR+CF  E  G  KG   ++S++  + AL ++ E S   +  EV F G
Sbjct: 94  LCLHIAHDCNLACRYCFAEE--GEYKGRRALMSAEVGKKALDFLVENSGNRRNLEVDFFG 151

Query: 152 GDPLI 156
           G+PL+
Sbjct: 152 GEPLM 156


>gi|317499049|ref|ZP_07957330.1| radical SAM superfamily protein [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316893699|gb|EFV15900.1| radical SAM superfamily protein [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 458

 Score = 37.7 bits (86), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKG--TVLSSKDTEAALAYIQEKS---QIWEVIFTG 151
           + L + H C + CR+CF  E  G  KG   ++S++  + AL ++ E S   +  EV F G
Sbjct: 94  LCLHIAHDCNLACRYCFAEE--GEYKGRRALMSAEVGKKALDFLVENSGNRRNLEVDFFG 151

Query: 152 GDPLI 156
           G+PL+
Sbjct: 152 GEPLM 156


>gi|329766234|ref|ZP_08257792.1| radical SAM domain-containing protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329137293|gb|EGG41571.1| radical SAM domain-containing protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 237

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT 150
           Y  + L   L  CP  C +C  +E +    G   S    E A   I    K+Q ++V FT
Sbjct: 19  YGTKTLFVRLAGCPFTCFYCDTKESLPLDSGQEYS---IEEACTLIDSNLKNQTYKVNFT 75

Query: 151 GGDPLI 156
           GGDPLI
Sbjct: 76  GGDPLI 81


>gi|167766768|ref|ZP_02438821.1| hypothetical protein CLOSS21_01276 [Clostridium sp. SS2/1]
 gi|167711522|gb|EDS22101.1| hypothetical protein CLOSS21_01276 [Clostridium sp. SS2/1]
          Length = 458

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKG--TVLSSKDTEAALAYIQEKS---QIWEVIFTG 151
           + L + H C + CR+CF  E  G  KG   ++S++  + AL ++ E S   +  EV F G
Sbjct: 94  LCLHIAHDCNLACRYCFAEE--GEYKGRRALMSAEVGKKALDFLVENSGNRRNLEVDFFG 151

Query: 152 GDPLI 156
           G+PL+
Sbjct: 152 GEPLM 156


>gi|330503007|ref|YP_004379876.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
 gi|328917293|gb|AEB58124.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
          Length = 460

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 9/107 (8%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
           C   C +C   +++   +G  L       ++ E    YI +   I ++ F GG P  LSH
Sbjct: 63  CAHICYYCACNKVITKDRGRALPYLEKLEREIEIVSRYIDKNQPIEQLHFGGGTPTFLSH 122

Query: 160 KRLQKVLKTLRYIKHVQILRFHS--RVPIVDPQRINPELIQCLKEAG 204
             L+++++ LR  +H  +L   S      +DP+  +   +  L+E G
Sbjct: 123 DELRRLMQHLR--QHFNLLDDDSGDYSIEIDPREADWSTMGLLRELG 167


>gi|212711633|ref|ZP_03319761.1| hypothetical protein PROVALCAL_02708 [Providencia alcalifaciens DSM
           30120]
 gi|212685735|gb|EEB45263.1| hypothetical protein PROVALCAL_02708 [Providencia alcalifaciens DSM
           30120]
          Length = 457

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 31/224 (13%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-----LSSKDTE 132
           D N         RYPDR L   +H+  C   C FC   ++V  QK        +  K+  
Sbjct: 35  DYNEQAFIEATQRYPDRPLSLYVHIPFCHKLCYFCGCNKLVTRQKHKADEYLEVIEKEII 94

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQR 191
              A ++ ++ + ++ + GG P  L   ++  ++  L+   H       + + I VDP+ 
Sbjct: 95  QRAALLKNRT-VTQMHWGGGTPTYLDKAQVSHLVGLLKKYFHFAP---DAEMSIEVDPRE 150

Query: 192 INPELIQCLKEAG------------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
           I  ++I  L+  G            K V + ++     EF     A I R    G    S
Sbjct: 151 IELDMIDHLRSEGFNRLSMGVQDFNKEVQVLVNREQDEEF---IFALIKRAKETGFTSTS 207

Query: 240 QSVLLKGINDDPEILANLMRTFVEL---RIKPY-YLHHPDLAAG 279
             ++       PE  A  ++   EL   R+  + Y H P+L A 
Sbjct: 208 IDLIYGLPKQTPESFAFTLKKVAELAPDRLSVFNYAHLPNLFAA 251


>gi|257085347|ref|ZP_05579708.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           Fly1]
 gi|256993377|gb|EEU80679.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           Fly1]
          Length = 324

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  
Sbjct: 2   NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I +V  TGG+PL+  +         L  IK ++ +    +V +           Q LKEA
Sbjct: 62  IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113

Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
           G   V I++    P EF E  I  + +L N
Sbjct: 114 GLDGVNISLDTLDPEEFRE--ITRVGQLRN 141


>gi|15644078|ref|NP_229127.1| astB/chuR-related protein [Thermotoga maritima MSB8]
 gi|4981884|gb|AAD36397.1|AE001787_2 astB/chuR-related protein [Thermotoga maritima MSB8]
          Length = 454

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 18/95 (18%)

Query: 80  DNNHSPLKGI-----VHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-- 129
           D+N   L+ +      +RY DR L   + L H C   C +C+++ ++    G+ +S K  
Sbjct: 65  DDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCVYCYQK-VLHISSGSYISEKVQ 123

Query: 130 -----DTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
                D E  L Y  +K  +  V F GG+PL+L  
Sbjct: 124 SNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEE 156


>gi|29375960|ref|NP_815114.1| molybdopterin cofactor biosynthesis protein A, putative
           [Enterococcus faecalis V583]
 gi|256965220|ref|ZP_05569391.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           HIP11704]
 gi|257419205|ref|ZP_05596199.1| predicted protein [Enterococcus faecalis T11]
 gi|29343422|gb|AAO81184.1| molybdopterin cofactor biosynthesis protein A, putative
           [Enterococcus faecalis V583]
 gi|256955716|gb|EEU72348.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           HIP11704]
 gi|257161033|gb|EEU90993.1| predicted protein [Enterococcus faecalis T11]
          Length = 324

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  
Sbjct: 2   NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKED 61

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I +V  TGG+PL+     L  ++K ++ I  ++ +   +     +  ++  E  Q LKEA
Sbjct: 62  IKKVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEA 113

Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
           G   + I++    P EF E  I  + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141


>gi|146296194|ref|YP_001179965.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
 gi|145409770|gb|ABP66774.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 231

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 27/190 (14%)

Query: 93  YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           YP +I        C   C FC+  ++V + KG  +   D      Y+ ++  I + V  T
Sbjct: 13  YPKKIAATCFFGGCNFSCPFCYNSQLV-NFKGNFM---DDSIFFEYLDKRKGIVDAVCIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P  L+ + L + +K    IK   +L        +D     PE++Q L +AG   Y+A
Sbjct: 69  GGEP-TLNEEYLTEFIKK---IKQRDLL------VKLDTNGSRPEVLQRLLDAGLLDYVA 118

Query: 211 IHANHPYE-------FSE--EAIAAISRLANAGIILLSQSVLLKGINDDPEIL--ANLMR 259
           +    P E       FSE  +   +I  L N+ I    ++ + K ++   +IL  A L++
Sbjct: 119 MDVKAPLEKYPQITGFSEVDKIRRSIEILKNSNIDYEFRTTVNKNLHTVEDILNIARLLK 178

Query: 260 TFVELRIKPY 269
                 IKPY
Sbjct: 179 DAKLYVIKPY 188


>gi|189346577|ref|YP_001943106.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Chlorobium limicola DSM 245]
 gi|189340724|gb|ACD90127.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Chlorobium limicola DSM 245]
          Length = 244

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 85/202 (42%), Gaps = 20/202 (9%)

Query: 93  YPDRILLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQIWEVIF 149
           YP  I   +  V C   C +C   E+V  ++ TV++ +    E      + +S +  V+ 
Sbjct: 28  YPGCIAAVIFTVGCNFRCSYCHNPELVEPER-TVVNRRIPFHEVVRLVGRNRSCLDGVVV 86

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC----LKEAGK 205
           TGG+P +  H  L + L+T R +     L  +   P +    +   L+ C    +K   +
Sbjct: 87  TGGEPAM--HASLPESLRTFRKLGLRVKLDTNGSYPEMLDLLLQERLVDCVALDIKAPLR 144

Query: 206 PVYIAIHANHPYEFSEEAIAAISR----LANAGIILLSQSVLLKGI---NDDPEILANLM 258
           P         P   SE  +  I R    L N+GI L+ +S LLKGI    D  E+ A   
Sbjct: 145 PSRYEEVVGIPC--SEAMMKRIERSCSLLLNSGIDLVFRSTLLKGIHASEDVEEMAAAAG 202

Query: 259 RTFVELRIKPYYLHHPDLAAGT 280
              V  R +P     P LAAG 
Sbjct: 203 NRLVLQRFRPERTLRP-LAAGA 223


>gi|329929025|ref|ZP_08282827.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5]
 gi|328937014|gb|EGG33443.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5]
          Length = 334

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 34/197 (17%)

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           PLK    R  D I + +   C + C +C   E +  Q    + S +  AA+  +     +
Sbjct: 4   PLKDSFGRVHDYIRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAIMRVLAPMGV 63

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            +V  TGG+PL+   K L+ ++  +  I+ VQ +   +   ++      P   + LKEAG
Sbjct: 64  SKVRLTGGEPLV--RKDLETLVHKIASIEGVQDISLTTNGIML------PSKARLLKEAG 115

Query: 205 -KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS--------------QSVLLKGIND 249
              + I++ +       EE  A I+R      +L                  VL+KG N+
Sbjct: 116 LTRINISLDS-----LQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNE 170

Query: 250 DPEILANLMRTFVELRI 266
           D       +R F+ L +
Sbjct: 171 DE------IRDFIALTL 181


>gi|257089787|ref|ZP_05584148.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis
           CH188]
 gi|256998599|gb|EEU85119.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis
           CH188]
          Length = 324

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  
Sbjct: 2   NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I +V  TGG+PL+  +         L  IK ++ +    +V +           Q LKEA
Sbjct: 62  IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113

Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
           G   + I++    P EF E  I  + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141


>gi|222528368|ref|YP_002572250.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor bescii DSM 6725]
 gi|222455215|gb|ACM59477.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor bescii DSM 6725]
          Length = 231

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 16/128 (12%)

Query: 93  YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           YP +I        C   C FC+  E+V + KG  +   D      Y+ ++  I + V  T
Sbjct: 13  YPKKIAATCFFGGCNFSCPFCYNSELV-NFKGKFM---DDSIFFEYLDKRKGIVDAVCIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P  L+ + L + +K    IK   +L        +D     PE++Q L +AG   Y+A
Sbjct: 69  GGEP-TLNEEYLTEFIKK---IKQKNLL------VKLDTNGSKPEVLQRLLDAGLLDYVA 118

Query: 211 IHANHPYE 218
           +    P E
Sbjct: 119 MDVKAPLE 126


>gi|171059452|ref|YP_001791801.1| coproporphyrinogen III oxidase [Leptothrix cholodnii SP-6]
 gi|170776897|gb|ACB35036.1| oxygen-independent coproporphyrinogen III oxidase [Leptothrix
           cholodnii SP-6]
          Length = 487

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 55/237 (23%), Positives = 88/237 (37%), Gaps = 47/237 (19%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
           C   C +C   ++V    G   +     +++ E     +    ++ ++ F GG P  LS 
Sbjct: 91  CESVCYYCACNKIVTRDHGRSTAYIDALARELELVTQTLGRGQRVSQLHFGGGTPTFLSD 150

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAG------------KP 206
             L +++  LR   H++    H    I +DP+ ++ E +  LKE G              
Sbjct: 151 AELDRLMGELRRHFHIEP---HGEYSIEIDPRTVSRERLAHLKELGFNRVSFGVQDFDAD 207

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMRTFVELR 265
           V  A+H   P+E  E  +     L    I +     L+ G+    PE  A  +R    LR
Sbjct: 208 VQKAVHRVQPFEQVEALMKDARELGFHSINV----DLIYGLPKQTPESFARTVRQVAGLR 263

Query: 266 IKPYYLHHPDLAA--GTSHF--------RLTIEE---GQKIVASLKEKISGLCQPFY 309
                   PD  A  G +H         R+  EE   G   +  L + ISG     Y
Sbjct: 264 --------PDRIAMYGYAHLPQRFKPQRRIVTEELPRGSDRIGMLSQAISGFISHGY 312


>gi|300860220|ref|ZP_07106307.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           TUSoD Ef11]
 gi|295112913|emb|CBL31550.1| molybdenum cofactor biosynthesis protein A, bacterial [Enterococcus
           sp. 7L76]
 gi|300849259|gb|EFK77009.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           TUSoD Ef11]
          Length = 321

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  I 
Sbjct: 1   MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEDIK 60

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
           +V  TGG+PL+  +         L  IK ++ +    +V +           Q LKEAG 
Sbjct: 61  KVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGL 112

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232
             + I++    P EF E  I  + +L N
Sbjct: 113 DGINISLDTLDPEEFRE--ITRVGQLRN 138


>gi|257416003|ref|ZP_05592997.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           AR01/DG]
 gi|257157831|gb|EEU87791.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           ARO1/DG]
          Length = 324

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  
Sbjct: 2   NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I +V  TGG+PL+  +         L  IK ++ +    +V +           Q LKEA
Sbjct: 62  IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113

Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
           G   + I++    P EF E  I  + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141


>gi|83591857|ref|YP_425609.1| GTP cyclohydrolase subunit MoaA [Rhodospirillum rubrum ATCC 11170]
 gi|83574771|gb|ABC21322.1| GTP cyclohydrolase subunit MoaA [Rhodospirillum rubrum ATCC 11170]
          Length = 365

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 27/183 (14%)

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQ 143
           PL     R    + L +   C + C +C   +MV   K  +LS ++ E  ALA+I  +  
Sbjct: 32  PLVDAFGRTVTYLRLSVTDRCDLRCAYCMAEDMVFLPKRDLLSLEELETVALAFI--RRG 89

Query: 144 IWEVIFTGGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           + ++  TGG+PL   H+R L  +++ L      + LR   R   +D   +     +  + 
Sbjct: 90  VRKIRITGGEPL---HRRGLMGLIENL-----GRTLRPAERECGLDELTLTTNATRLAEV 141

Query: 203 AG-------KPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGI 247
           AG       + + +++    P  F         +  +A ++    AG+ +   +V L+G+
Sbjct: 142 AGDLAARGVRRINVSLDTLRPERFRAITRRGDLDRVMAGLAAADRAGLAVKINTVALRGV 201

Query: 248 NDD 250
           N+D
Sbjct: 202 NED 204


>gi|228939284|ref|ZP_04101877.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228978776|ref|ZP_04139147.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           Bt407]
 gi|228781037|gb|EEM29244.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           Bt407]
 gi|228820479|gb|EEM66511.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 337

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%)

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ----KGTVLSSKDTEAALAYI 138
           H  +K  + R    + + ++  C   C +C   E+ G      K  +L + D    LA +
Sbjct: 2   HENMKDSLERPLQDLRISVIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARL 61

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
                + ++  TGG+PL      L+K L TL  I  +  L     + +        +  +
Sbjct: 62  FISMGVNKIRLTGGEPL------LRKDLPTL--IARLAKLEGLKDIGLTTNGIHLAKQAK 113

Query: 199 CLKEAG-KPVYIAIHANHPYEF---------SEEAIAAISRLANAGIILLSQSVLLKGIN 248
            LKEAG K V I++ A   Y F         ++  +  I    NAG+ +    V+ KG+N
Sbjct: 114 ALKEAGLKRVNISLDAIEDYVFKKINGRNVSTKPVLKGIEEAKNAGLEVKVNMVVKKGMN 173

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAA 278
           D    + ++ R F E  I+  ++   D+ +
Sbjct: 174 DSQ--ILHMARYFKEKEIQLRFIEFMDVGS 201


>gi|229545922|ref|ZP_04434647.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
           [Enterococcus faecalis TX1322]
 gi|256853030|ref|ZP_05558400.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|229308990|gb|EEN74977.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
           [Enterococcus faecalis TX1322]
 gi|256711489|gb|EEU26527.1| conserved hypothetical protein [Enterococcus faecalis T8]
          Length = 324

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  
Sbjct: 2   NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I +V  TGG+PL+  +         L  IK ++ +    +V +           Q LKEA
Sbjct: 62  IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113

Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
           G   + I++    P EF E  I  + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141


>gi|294661183|ref|YP_003573058.1| hypothetical protein Aasi_1616 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|227336333|gb|ACP20930.1| hypothetical protein Aasi_1616 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 339

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 25/168 (14%)

Query: 105 CPVYCRFC-------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLI 156
           C + C+FC        R    G     +L +KD            +I  ++  G G+PL+
Sbjct: 95  CTLNCKFCHTGTQPLVRNLRAGEIVAQLLHAKDVLQDWPSHAPTRKINNIVMMGMGEPLL 154

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA--- 213
                 ++V K ++ + H Q L    +   +    I P++ +C +E G  + I++HA   
Sbjct: 155 ----NYEQVAKAIQIMMHPQGLDISRKKITLSTSGIVPQIKRCAEELGVNLAISLHAVTD 210

Query: 214 ---------NHPYEFSEEAIAAISRLANAGIILLS-QSVLLKGINDDP 251
                    N  Y  +E   A     +  G   ++ + V+LKG+ND P
Sbjct: 211 ELRNHLVPINKKYPINELLQACRDYASITGCRKITFEYVMLKGVNDSP 258


>gi|257086842|ref|ZP_05581203.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           D6]
 gi|256994872|gb|EEU82174.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           D6]
          Length = 324

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  I 
Sbjct: 4   MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEGIK 63

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
           +V  TGG+PL+  +         L  IK ++ +    +V +           Q LKEAG 
Sbjct: 64  KVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGL 115

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232
             + I++    P EF E  I  + +L N
Sbjct: 116 DGINISLDTLDPEEFRE--ITRVGQLRN 141


>gi|256618973|ref|ZP_05475819.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           ATCC 4200]
 gi|256762400|ref|ZP_05502980.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           T3]
 gi|256598500|gb|EEU17676.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           ATCC 4200]
 gi|256683651|gb|EEU23346.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           T3]
          Length = 324

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  
Sbjct: 2   NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I +V  TGG+PL+     L  ++K ++ I  ++ +   +     +  ++  E  Q LKEA
Sbjct: 62  IKKVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEA 113

Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
           G   + I++    P EF E  I  + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141


>gi|255975948|ref|ZP_05426534.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           T2]
 gi|255968820|gb|EET99442.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           T2]
          Length = 324

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  
Sbjct: 2   NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I +V  TGG+PL+  +         L  IK ++ +    +V +           Q LKEA
Sbjct: 62  IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113

Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
           G   + I++    P EF E  I  + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141


>gi|238750771|ref|ZP_04612269.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia rohdei
           ATCC 43380]
 gi|238710915|gb|EEQ03135.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia rohdei
           ATCC 43380]
          Length = 459

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 12/133 (9%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKG------TVLSSKDT 131
           D N S  +  V RYP R L   +H+  C   C FC   ++V  Q+        VL  +  
Sbjct: 37  DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIR 96

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
           + A  +     Q+ ++ + GG P  L+  ++  ++  LR  ++   L    +   VDP+ 
Sbjct: 97  QRAALFA--GRQVSQMHWGGGTPTYLNKTQITHLMNLLR--ENFDFLPGAEQSIEVDPRE 152

Query: 192 INPELIQCLKEAG 204
           I  ++I  L+  G
Sbjct: 153 IELDVIDHLRAEG 165


>gi|327535035|gb|AEA93869.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           OG1RF]
          Length = 321

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  I 
Sbjct: 1   MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEGIK 60

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
           +V  TGG+PL+  +         L  IK ++ +    +V +           Q LKEAG 
Sbjct: 61  KVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGL 112

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232
             + I++    P EF E  I  + +L N
Sbjct: 113 DGINISLDTLDPEEFRE--ITRVGQLRN 138


>gi|256958884|ref|ZP_05563055.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           DS5]
 gi|257078915|ref|ZP_05573276.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           JH1]
 gi|256949380|gb|EEU66012.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           DS5]
 gi|256986945|gb|EEU74247.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           JH1]
          Length = 324

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  
Sbjct: 2   NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I +V  TGG+PL+     L  ++K ++ I  ++ +   +     +  ++  E  Q LKEA
Sbjct: 62  IKKVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEA 113

Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
           G   + I++    P EF E  I  + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141


>gi|144899283|emb|CAM76147.1| FeMo cofactor biosynthesis protein [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 490

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 47/269 (17%)

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSS 128
           +PE   + I D  H       H Y  R+ + +   C + C +C R+ +     +  V S 
Sbjct: 38  MPEHVWNKIKD--HPCYSEEAHHYFARMHVAVAPACNIQCNYCNRKYDCSNESRPGVTSE 95

Query: 129 KDT--EAALAYIQEKSQIWEVIFTG----GDPL------ILSHKRLQKVLKTLRYI---- 172
           + T  +AAL  +   +++ ++   G    GD +        + ++++K L  L++     
Sbjct: 96  RMTPEQAALKVVAVANKVPQLSVLGIAGPGDSMFDWRKTFETFRQVEKRLPDLKFCVSTN 155

Query: 173 -----KHVQILRFHS------RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
                 H+  L  H+       + +VDP+ I   +   +   GK  Y  + A+      E
Sbjct: 156 GLALPDHIDALADHNIDHVTVTINMVDPE-IGTLIYPWIYHNGKR-YTGLDASKI--LHE 211

Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-----PDL 276
             + ++  LA+  I++   SV++ G+ND      +L+     ++ +  +LH+      D 
Sbjct: 212 RQMESLEALASKNILVKVNSVMIPGVNDQ-----HLLEVNAAIKARGAFLHNVMPLISDA 266

Query: 277 AAGTSHFRLTIEEGQKI--VASLKEKISG 303
           A GT HF LT + G     +  L++K++G
Sbjct: 267 AHGT-HFGLTGQRGPSAAELKDLQDKLAG 294


>gi|212223647|ref|YP_002306883.1| Hypothetical molybdenum cofactor biosynthesis protein A
           [Thermococcus onnurineus NA1]
 gi|212008604|gb|ACJ15986.1| Hypothetical molybdenum cofactor biosynthesis protein A
           [Thermococcus onnurineus NA1]
          Length = 419

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 39/187 (20%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144
           G++ R  + I ++ +  C + C FC   E   S+   +    D +  + +  + +QI   
Sbjct: 108 GLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLIKWFDDVAQIKGK 167

Query: 145 -WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQ 198
             E    G G+PL+   +           ++ VQ LR H  V ++  Q     +N  L++
Sbjct: 168 GLEAHLDGQGEPLLYPFR-----------VELVQALREHPNVRVISMQSNGTLLNDRLVE 216

Query: 199 CLKEAG-KPVYIAIHANHPYEFSEEAIAAISR--------------LANAGIILLSQSVL 243
            L EAG   V +++H+  P    E+A   + R              L NAG+ +L   V+
Sbjct: 217 ELAEAGLDRVNLSLHSLDP----EKAKMLMGRKDYDLQHVLDMAEALVNAGVDVLIAPVI 272

Query: 244 LKGINDD 250
           + GIND+
Sbjct: 273 IFGINDN 279


>gi|68300836|gb|AAY89357.1| RNA polymerase IV largest subunit [Marchantia polymorpha]
          Length = 1008

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 11/103 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           DR+ +  LH C    ++C  R ++  Q   +   +    TE A+AY  + S+ WE +   
Sbjct: 486 DRVSILRLHRCKSDGKYCEERRVLKLQDELQPVTMEILATETAIAYSSDSSEQWEGLDCA 545

Query: 152 GDPL-------ILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPI 186
              L        + H +L K++ T + I    IL R HS+V I
Sbjct: 546 ATELKQTEFFPWVGHVQLDKMVLTEKKISQEMILDRLHSKVKI 588


>gi|146296621|ref|YP_001180392.1| radical SAM domain-containing protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410197|gb|ABP67201.1| Radical SAM domain protein [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 341

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 6/110 (5%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           CP  C FC ++ + G ++   +     +      + K +  E+ + GG+   +  K  QK
Sbjct: 15  CPFKCIFCNQKIISGEKEDVTVQRIKRQIEEGLSKNKGEDVELAYYGGNFTAIDIKMQQK 74

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
           +L+  R  ++++ +R  +R     P  I+ E++  LK+   K V + I +
Sbjct: 75  LLELARSFENIKSIRISTR-----PDCIDKEILGFLKDYNVKTVELGIQS 119


>gi|257082638|ref|ZP_05576999.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           E1Sol]
 gi|256990668|gb|EEU77970.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           E1Sol]
          Length = 324

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  
Sbjct: 2   NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I +V  TGG+PL+  +         L  IK ++ +    +V +           Q LKEA
Sbjct: 62  IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113

Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
           G   + I++    P EF E  I  + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141


>gi|255972893|ref|ZP_05423479.1| predicted protein [Enterococcus faecalis T1]
 gi|257422717|ref|ZP_05599707.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|255963911|gb|EET96387.1| predicted protein [Enterococcus faecalis T1]
 gi|257164541|gb|EEU94501.1| conserved hypothetical protein [Enterococcus faecalis X98]
          Length = 324

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  
Sbjct: 2   NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I +V  TGG+PL+  +         L  IK ++ +    +V +           Q LKEA
Sbjct: 62  IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113

Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
           G   + I++    P EF E  I  + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141


>gi|256962021|ref|ZP_05566192.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           Merz96]
 gi|256952517|gb|EEU69149.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           Merz96]
          Length = 324

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  
Sbjct: 2   NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I +V  TGG+PL+     L  ++K ++ I  ++ +   +     +  ++  E  Q LKEA
Sbjct: 62  IKKVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEA 113

Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232
           G   + I++    P EF E  I  + +L N
Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141


>gi|302870990|ref|YP_003839626.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302573849|gb|ADL41640.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 231

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 16/128 (12%)

Query: 93  YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           YP +I        C   C FC+  ++V + KG  +   D      Y+ ++  I + V  T
Sbjct: 13  YPKKIAATCFFGGCNFSCPFCYNSQLV-NFKGEFM---DDNIFFEYLDKRKGIVDAVCIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P  L+ + L + +K ++           S +  +D     PE++Q L +AG   Y+A
Sbjct: 69  GGEP-TLNEEYLTEFIKKIKN---------RSLLVKLDTNGSRPEVLQRLLDAGLLDYVA 118

Query: 211 IHANHPYE 218
           +    P E
Sbjct: 119 MDVKAPLE 126


>gi|217967818|ref|YP_002353324.1| radical SAM enzyme, Cfr family [Dictyoglomus turgidum DSM 6724]
 gi|254807171|sp|B8E0X3|RLMN_DICTD RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|217336917|gb|ACK42710.1| radical SAM enzyme, Cfr family [Dictyoglomus turgidum DSM 6724]
          Length = 348

 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 30/206 (14%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           E ED  G+N  + L  I H+  + + + +   CP+ C+FC    ++G ++   L + +  
Sbjct: 81  ELED--GENIETVL--ISHKNRNTVCVSVQVGCPIGCKFC-ATGLIGLKRN--LETHEII 133

Query: 133 AALAYIQE-----KSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             L  IQE     + +I  V++ G G+PL         V+K++R IK        S+   
Sbjct: 134 GQLMVIQEDLEKKEEKISNVVYMGMGEPL----ANYDNVIKSIRIIKEEWGFNIGSKHIT 189

Query: 187 VDPQRINPELIQCLKEAGK-PVYIAIHA------------NHPYEFSEEAIAAISRLANA 233
           +    I P++ Q  +E  K  + I++HA            N  Y   E   +A       
Sbjct: 190 LSTIGIIPKIYQLAEENLKIRLAISLHASNNELRSKIIPINKEYPIEELLESAFYYAEKT 249

Query: 234 GIILLSQSVLLKGINDDPEILANLMR 259
           G  +  + VL+K  ND  E    L+R
Sbjct: 250 GRRVTFEYVLIKNFNDRREDAKELVR 275


>gi|229550115|ref|ZP_04438840.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
           [Enterococcus faecalis ATCC 29200]
 gi|229304819|gb|EEN70815.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
           [Enterococcus faecalis ATCC 29200]
          Length = 321

 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  I 
Sbjct: 1   MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEGIK 60

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
           +V  TGG+PL+  +         L  IK ++ +    +V +           Q LKEAG 
Sbjct: 61  KVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGL 112

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232
             + I++    P EF E  I  + +L N
Sbjct: 113 DGINISLDTLDPEEFRE--ITRVGQLRN 138


>gi|294780074|ref|ZP_06745450.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           PC1.1]
 gi|294452826|gb|EFG21252.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           PC1.1]
 gi|323480628|gb|ADX80067.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           62]
          Length = 321

 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 11/148 (7%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           +K   +R  D + L L   C + C +C     +   K   L + D    L  I  K  I 
Sbjct: 1   MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEGIK 60

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
           +V  TGG+PL+     L  ++K ++ I  ++ +   +     +  ++  E  Q LKEAG 
Sbjct: 61  KVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEAGL 112

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232
             + I++    P EF E  I  + +L N
Sbjct: 113 DGINISLDTLDPEEFRE--ITRVGQLRN 138


>gi|302759444|ref|XP_002963145.1| hypothetical protein SELMODRAFT_79056 [Selaginella moellendorffii]
 gi|300170006|gb|EFJ36608.1| hypothetical protein SELMODRAFT_79056 [Selaginella moellendorffii]
          Length = 386

 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 37/84 (44%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           ERED  G +    L     R  + + + L   C + C +C   E V    G  L S+D  
Sbjct: 49  EREDEAGPSVSDMLVDSFGRRHNYLRISLTERCNLRCHYCMPEEGVKLTPGAHLLSQDEI 108

Query: 133 AALAYIQEKSQIWEVIFTGGDPLI 156
            ALA +     + ++  TGG+P +
Sbjct: 109 VALAKVFVGGGVDKIRLTGGEPTV 132


>gi|261403123|ref|YP_003247347.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus vulcanius
           M7]
 gi|261370116|gb|ACX72865.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus vulcanius
           M7]
          Length = 783

 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 25/172 (14%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-------LSSKDTEAALAYIQEKSQIW 145
           Y ++I  +L+ VC    +    RE++ SQ  TV       LSS+ T++A + I +     
Sbjct: 262 YDEQIKYELIKVCSEALKLMHARELLESQGKTVFLNYINKLSSQRTKSAKSVIND----- 316

Query: 146 EVIFTGGDPLILS---HKRLQKVLKTLRYI----KHVQILRFHSRVPIVDP--QRINPEL 196
           E I    + L+ S   H +L+KV++ ++ I    K  +I+ F      V+     +N   
Sbjct: 317 EKIIKAVNLLLKSNTDHPKLEKVIEMVKKILKENKDERIIIFAQYRDTVEKIVNLLNQNE 376

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
           I+ +K  G+    A          +E I AI +    G +L+S SV  +GI+
Sbjct: 377 IKAIKFIGQ----ASKEKGKGMTQKEQIKAIEKFKKEGSVLVSTSVSEEGID 424


>gi|18312199|ref|NP_558866.1| molybdenum cofactor biosynthesis protein (moaA) [Pyrobaculum
           aerophilum str. IM2]
 gi|24211994|sp|Q8ZYE5|MOAA_PYRAE RecName: Full=Probable molybdenum cofactor biosynthesis protein A
 gi|18159637|gb|AAL63048.1| molybdenum cofactor biosynthesis protein (moaA) [Pyrobaculum
           aerophilum str. IM2]
          Length = 310

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 31/205 (15%)

Query: 96  RILLKLLHV----CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R L KL +V    C   C FC   E    ++G  L+++D    +  + +   + +   TG
Sbjct: 8   RSLQKLRYVVNDECNYNCVFC-HFEGQSRRQGRYLTAEDY-GFVTSVFKSLGVADFKITG 65

Query: 152 GDPLILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
           G+PL+     L    + KT  Y            V +     +  + ++ L+ AG K   
Sbjct: 66  GEPLLRGDIDLIVANIAKTGAY------------VTLTTNGYLLRKWVRKLQAAGLKRAN 113

Query: 209 IAIHANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
           ++IH   P ++S+          E +  ++   + GI L   +V+L+GIN D + + NL+
Sbjct: 114 VSIHTTDPEKYSKITGVPPSAFREVLRGLTEARDVGISLKLNAVVLRGINTDRDSVKNLV 173

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHF 283
           +    L     ++       G S F
Sbjct: 174 KLAASLGAALQFIELMPSGWGASVF 198


>gi|116751471|ref|YP_848158.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|205829911|sp|A0LQM1|RLMN_SYNFM RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|116700535|gb|ABK19723.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 342

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 28/182 (15%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIFTG-GDPLILSH 159
           C + C+FC    + G ++   LS+ +    +  +Q     +S+I  ++F G G+PL    
Sbjct: 112 CALGCKFCLTGSL-GFKRN--LSAAEIVDQVCQVQRDLGSRSRITNIVFMGMGEPL---- 164

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
             L  VL+ +R I     + F  R   +    + P+L +  +E+   + +++HA      
Sbjct: 165 ANLDSVLRAIRVIAEPNGMAFSHRRITLSTAGLVPQLRRLGRESPVNLAVSLHAAENELR 224

Query: 220 SEEAIAAISRLANAGIILLS--------------QSVLLKGINDDPEILANLMRTFVELR 265
           +E  +  ++R     +++ +              + +LL GINDDP+    L++    +R
Sbjct: 225 AE--LMPVNRTYPLEVLMAACREYPLPPRKRITFEYILLDGINDDPKQAKQLVKLLHGIR 282

Query: 266 IK 267
            K
Sbjct: 283 AK 284


>gi|238790753|ref|ZP_04634513.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           frederiksenii ATCC 33641]
 gi|238721151|gb|EEQ12831.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia
           frederiksenii ATCC 33641]
          Length = 457

 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 12/133 (9%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKG------TVLSSKDT 131
           D N S  +  V RYP R L   +H+  C   C FC   ++V  Q+        VL  +  
Sbjct: 35  DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIR 94

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
           + A+ +     Q+ ++ + GG P  L+  ++  ++  LR  ++   L    +   VDP+ 
Sbjct: 95  QRAVLFA--GRQVSQMHWGGGTPTYLNKTQITHLMNLLR--ENFDFLPGAEQSIEVDPRE 150

Query: 192 INPELIQCLKEAG 204
           I  +++  L+  G
Sbjct: 151 IELDVLDHLRAEG 163


>gi|325294881|ref|YP_004281395.1| ribosomal RNA large subunit methyltransferase N [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065329|gb|ADY73336.1| Ribosomal RNA large subunit methyltransferase N [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 345

 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 31/176 (17%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVIFTG-GDPLIL 157
           CPV C+FC     + ++ G   +    E    YI       E  +I  V+F G G+P + 
Sbjct: 110 CPVGCKFC-----LTAKDGFTRNLTAAEIVDQYIHVQRDVGEDKRISNVVFMGMGEPFL- 163

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA--- 213
                + V K +  +    +L   +R   +    + P + +  KE  K  + I++HA   
Sbjct: 164 ---NFENVKKAVEIMTDKNMLDLSTRKITISTVGVVPGIDRMAKEMNKVKLAISLHATTD 220

Query: 214 ---------NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMR 259
                    N  Y  S E +AA+ R     I  ++ + V+L+G+ND  E    L++
Sbjct: 221 EVREKIVPLNRKYPIS-EIMAALRRYPADNIRRIMIEYVMLEGVNDSVEDAKRLVK 275


>gi|302796832|ref|XP_002980177.1| hypothetical protein SELMODRAFT_112186 [Selaginella moellendorffii]
 gi|300151793|gb|EFJ18437.1| hypothetical protein SELMODRAFT_112186 [Selaginella moellendorffii]
          Length = 386

 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 37/84 (44%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           ERED  G +    L     R  + + + L   C + C +C   E V    G  L S+D  
Sbjct: 49  EREDEAGPSVSDMLVDSFGRRHNYLRISLTERCNLRCHYCMPEEGVKLTPGAHLLSQDEI 108

Query: 133 AALAYIQEKSQIWEVIFTGGDPLI 156
            ALA +     + ++  TGG+P +
Sbjct: 109 VALAKVFVGGGVDKIRLTGGEPTV 132


>gi|269303256|gb|ACZ33356.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Chlamydophila pneumoniae LPCoLN]
          Length = 373

 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 18/95 (18%)

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEAA 134
           N  SPL   +H          +  C   CR+C      ++ E V      V+  ++    
Sbjct: 2   NGKSPLALYIH----------IPFCTKKCRYCSFYTIPYKSESVSLYCNAVI--QEGLRK 49

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           LA IQE   +  V F GG P ++SH  L+++LK L
Sbjct: 50  LAPIQETHFVETVFFGGGTPSLVSHLDLKRILKEL 84


>gi|313888496|ref|ZP_07822163.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845525|gb|EFR32919.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 349

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 15/107 (14%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAA----LAYIQEKSQIWEVIFTGGDPLILSHK 160
           CP  C FC +R++ G    T +S+ D E      L+Y + K  + EV F GG    +  +
Sbjct: 16  CPNDCVFCNQRKITGMS--TDISNSDVEDTILEYLSYFKRKDNV-EVAFYGGSFTAIPLE 72

Query: 161 RLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
              + LK     K    V+ +R  +R     P  I+  +++ LK+ G
Sbjct: 73  EQSEFLKVAHSYKEKGLVKYIRLSTR-----PDAIDDRILENLKKYG 114


>gi|115372589|ref|ZP_01459896.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310823867|ref|YP_003956225.1| radical sam domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115370310|gb|EAU69238.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309396939|gb|ADO74398.1| Radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 290

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 11/137 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +   ++  C   C +C ++ M G    T    +  EAAL  +      WE   +GG+P +
Sbjct: 8   VSWNIVGGCNYRCTYCVQKHMPGIGGPT---DEQLEAALTTLTALPGSWEFKISGGEPFL 64

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           L  KRL +V K L    H   L  +   P+    R+    I+   E  +    ++H    
Sbjct: 65  L--KRLPEVAKRLATAGHKVSLLTNLSAPL----RVLATFIEAAGEQLRTFSCSLHREEV 118

Query: 217 YE--FSEEAIAAISRLA 231
            E  F E+A A  + LA
Sbjct: 119 EEAAFLEKAQAVQALLA 135


>gi|224107843|ref|XP_002314621.1| predicted protein [Populus trichocarpa]
 gi|222863661|gb|EEF00792.1| predicted protein [Populus trichocarpa]
          Length = 369

 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 34/176 (19%)

Query: 105 CPVYCRFCFR-REMVGSQKGTVLSSKD--------TEAALA---YIQEKSQIWEVIFTG- 151
           C + C+FCF  R+      GT++  K          +A  A      E      V+F G 
Sbjct: 109 CAMNCQFCFTGRQANIFHFGTLMGLKRHLSTAEIIEQAVFAQRLLTNEVGPFTNVVFMGM 168

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+PL    + +  V+K    + H Q L F  R   V    + P+L + L E+     +A+
Sbjct: 169 GEPL----QNIDSVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLKRFLHESN--CALAV 222

Query: 212 HANHPYEFSEEAIAAISRLANAGIIL---------------LSQSVLLKGINDDPE 252
             N   +     I  I+R  N G++L               L + V+L+G+ND  +
Sbjct: 223 SLNATTDEVRNWIMPINRKYNLGLLLQTLREELGLKNSYKVLFEYVMLEGVNDSDD 278


>gi|315302537|ref|ZP_07873372.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL
           F6-596]
 gi|313629099|gb|EFR97397.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL
           F6-596]
          Length = 333

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 36/211 (17%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           G VH Y   I + +   C + C +C   E +       + SKD       I  K  I +V
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVGFMEIMVKFGIKKV 65

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI------QCLK 201
             TGG+PL+ +                V+I+R    +P ++   I    +      + LK
Sbjct: 66  RITGGEPLLRTD--------------IVEIVRGLGAIPEIEDISITTNAMYLAKKAEALK 111

Query: 202 EAG-KPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLS-QSVLLKGINDDP 251
           EAG   V I++ + H   F         ++ +  I +   AG+  +    VL+KG NDD 
Sbjct: 112 EAGLTRVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEAGLFPIKLNVVLIKGQNDDE 171

Query: 252 EILANLMRTFVELRIKPYYLHH-PDLAAGTS 281
             + N ++   +  I   ++ + P   AGTS
Sbjct: 172 --ITNFLQFTKDKDINIRFIEYMPIGHAGTS 200


>gi|292486525|ref|YP_003529391.1| O2-independent coproporphyrinogen III oxidase [Erwinia amylovora
           CFBP1430]
 gi|292897762|ref|YP_003537131.1| oxygen-independent coproporphyrinogen III oxidase [Erwinia
           amylovora ATCC 49946]
 gi|291197610|emb|CBJ44704.1| oxygen-independent coproporphyrinogen III oxidase [Erwinia
           amylovora ATCC 49946]
 gi|291551938|emb|CBA18975.1| O2-independent coproporphyrinogen III oxidase [Erwinia amylovora
           CFBP1430]
          Length = 457

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 109/238 (45%), Gaps = 32/238 (13%)

Query: 92  RYPDRILLKLLHV--CPVYCRFCFRREMVGSQK---GTVLSSKDTE-AALAYIQEKSQIW 145
           RYP R L   LH+  C   C FC   + V  Q+      L++   E AA A + ++  + 
Sbjct: 47  RYPQRPLSLYLHIPFCHRLCYFCGCNKQVTRQQHKADDYLAALMLEIAARARLFQQRTVS 106

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
           ++ + GG P  L+ +++++++  LR  +H  I         VDP+ I  +++  L+  G 
Sbjct: 107 QMHWGGGTPTFLNKQQIRRLMACLR--QHFHISDTAEISIEVDPREIELDVLDHLRAEGF 164

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGII--LLSQSVLLKGINDD-----------P 251
             + + +      +F+++    ++R+ +   I  L++++  L  ++ +           P
Sbjct: 165 NRLSMGVQ-----DFNKQVQEKVNRVQDEKTIFALVARARQLGFVSTNIDLIYGLPAQTP 219

Query: 252 EILANLMRTFVEL---RIKPY-YLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISGL 304
              A  ++  VEL   R+  + Y H P L A     R   + + Q+ +A L++ I+ L
Sbjct: 220 ASFAFTLQKVVELDPDRLSIFNYAHMPALFAAQRKIREAELPDAQQKLAILQQTIATL 277


>gi|226939284|ref|YP_002794355.1| coproporphyrinogen III oxidase [Laribacter hongkongensis HLHK9]
 gi|226714208|gb|ACO73346.1| HemN [Laribacter hongkongensis HLHK9]
          Length = 470

 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 7/105 (6%)

Query: 105 CPVYCRFCFRREMVGSQKG---TVLSSKDTEAAL--AYIQEKSQIWEVIFTGGDPLILSH 159
           C   C +C   +++   K    T L   + E AL   Y+Q   Q+ ++ F GG P  LS 
Sbjct: 74  CNTVCYYCACNKIITKDKSRADTYLDYLERELALHAEYLQGHPQLAQLHFGGGTPTFLSD 133

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            ++ ++++ +   +H Q++        +DP+++  + ++ L   G
Sbjct: 134 AQMTRLMQAIG--RHFQLVPHGEYSIEIDPRKVTADNVKHLASLG 176


>gi|297616758|ref|YP_003701917.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297144595|gb|ADI01352.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 326

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 18/156 (11%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C + CR+C     V  +  + + S +    +  +  +  I +V  TGG+PL+   + L +
Sbjct: 20  CNLRCRYCMPEAGVELKPHSEILSLEEIHRIIKVGTRVGIRKVRLTGGEPLV--RRNLSR 77

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFS--- 220
           +++ +R I  +        V I     + PE+   LKEAG   + +++   +P ++S   
Sbjct: 78  LVQMIRTIDLI------DDVAITTNGLLFPEMAGELKEAGLHRLNVSLDTMNPEKYSFIT 131

Query: 221 -----EEAIAAI-SRLANAGIILLSQSVLLKGINDD 250
                ++A+ AI + LA     +   +V+++GINDD
Sbjct: 132 RNGSLKQALRAIETALALEFHPVKINTVVMRGINDD 167


>gi|160902149|ref|YP_001567730.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95]
 gi|160359793|gb|ABX31407.1| Radical SAM domain protein [Petrotoga mobilis SJ95]
          Length = 464

 Score = 36.2 bits (82), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 18/136 (13%)

Query: 52  PNDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYP-DRILLKLLHVCPVYC 109
           P     R+F   KE E N++ E +++    N    L+  V RY    +LL++   C + C
Sbjct: 23  PKKVYNRRFNAIKEFEKNLINERKKNYTEKNTSEELRTNVLRYGLQELLLEVTQNCNLQC 82

Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE------------VIFTGGDPLIL 157
           R+C   E+    +   L + + + A+  I     +              + F GG+PL+ 
Sbjct: 83  RYCIYSEVYPMYRNNTLRAMNEDIAIKAIDLYFSLLREGISYNPYREPTIGFYGGEPLL- 141

Query: 158 SHKRLQKVLKTLRYIK 173
                + + K ++Y+K
Sbjct: 142 ---NFELIKKCIKYVK 154


>gi|261409709|ref|YP_003245950.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
           Y412MC10]
 gi|261286172|gb|ACX68143.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
           Y412MC10]
          Length = 334

 Score = 36.2 bits (82), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 34/197 (17%)

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           PLK    R  D I + +   C + C +C   E +  Q    + S +  A++  +     +
Sbjct: 4   PLKDSFGRVHDYIRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIASIMRVLAPMGV 63

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            +V  TGG+PL+   K L+ ++  +  I+ VQ +   +   ++      P   + LKEAG
Sbjct: 64  SKVRLTGGEPLV--RKDLETLVHQIASIEGVQDISLTTNGIML------PSKARLLKEAG 115

Query: 205 -KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS--------------QSVLLKGIND 249
              + I++ +       EE  A I+R      +L                  VL+KG N+
Sbjct: 116 LTRINISLDS-----LQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNE 170

Query: 250 DPEILANLMRTFVELRI 266
           D       +R F+ L +
Sbjct: 171 DE------IRDFIALTL 181


>gi|325959672|ref|YP_004291138.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
 gi|325331104|gb|ADZ10166.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
          Length = 500

 Score = 36.2 bits (82), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 29/196 (14%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHV---CPVYCRFCFRREMVGSQKGTVLSSK 129
           E    I D +     GI   +    +L L+ V   C + C  CF    V S+K    S +
Sbjct: 69  ENPQTIADTDCPNNCGICDEHESHTVLGLIDVTNRCNLKCPVCFANAAV-SKKLYEPSYE 127

Query: 130 DTEAALAYIQEKSQIWE--VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVP 185
           +    L  ++    +    + + GG+P +   K L  ++K  +     H QI     R+ 
Sbjct: 128 EIRTMLRNLRNNRPVPTPAIQYAGGEPTV--RKDLVDLIKLAKEEGFSHTQIATNGVRLA 185

Query: 186 IVDPQRINPELIQCLKEAG-KPVYIAIHA--NHPY------EFSEEAIAAI--SRLANAG 234
            +      P L Q LK+AG   VY+        PY      +     I AI   R AN G
Sbjct: 186 RL------PSLAQELKDAGLNTVYLQFDGVTEEPYLEIRQKDLLATKIKAIENCRKANLG 239

Query: 235 IILLSQSVLLKGINDD 250
           I+L+    LLKGINDD
Sbjct: 240 IVLVP--TLLKGINDD 253


>gi|282857182|ref|ZP_06266426.1| 23S rRNA m2A2503 methyltransferase [Pyramidobacter piscolens W5455]
 gi|282584968|gb|EFB90292.1| 23S rRNA m2A2503 methyltransferase [Pyramidobacter piscolens W5455]
          Length = 365

 Score = 35.8 bits (81), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 33/183 (18%)

Query: 105 CPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLIL 157
           CP+ C FC      F+R +   +  +  ++ +++           I  V+F G G+PL+ 
Sbjct: 135 CPLRCEFCATGQQGFKRNLSAGEIVSHFAAMESDVG-------HDINNVVFMGMGEPLL- 186

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
                + V+K +R     ++     R   +    I PE I+ L + G  +Y+ +  + P 
Sbjct: 187 ---NYENVVKAVRMFLEPKMRGLSVRHVTISTSGI-PEGIRRLADEGLDIYLCLSLHAPN 242

Query: 218 EFSEEAI----------AAISRL----ANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
                 I          A  S L       G+ L  + V+LK +ND P+    L   F  
Sbjct: 243 NELRSRIMPVNERFPLGAVFSALEYWQKKTGVRLTIEYVMLKNVNDTPDCAYELATLFSN 302

Query: 264 LRI 266
           L++
Sbjct: 303 LQV 305


Searching..................................................done


Results from round 2




>gi|75423266|sp|Q9XBQ8|KAMA_CLOSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName:
           Full=KAM
 gi|5410603|gb|AAD43134.1|AF159146_1 L-lysine 2,3-aminomutase [Clostridium subterminale]
          Length = 416

 Score =  518 bits (1334), Expect = e-145,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 209/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + + ++L     + KE+ + + +      +A+TP   +LI+P++PNDP+ +Q 
Sbjct: 22  WQVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRMAITPYYLSLIDPNDPNDPVRKQA 80

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   ELN    + EDP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   G 
Sbjct: 81  IPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQ 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              + +  +  + A+ YI+   Q+ +V+ +GGD L++S + L+ ++  LR I HV+I+R 
Sbjct: 141 SDDS-MPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI 199

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL+  LK+   PV++  H NHP E +EE+  A   LA+AG+ L +Q
Sbjct: 200 GSRTPVVLPQRITPELVNMLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQ 258

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND   ++  L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 259 SVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGH 318

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P +++D PGG GK  +  + +    +    + +   ++  Y
Sbjct: 319 TSGYCVPTFVVDAPGGGGKTPVMPNYVISQSHDKVILRNFEGVITTY 365


>gi|158319469|ref|YP_001511976.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158139668|gb|ABW17980.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii
           OhILAs]
          Length = 416

 Score =  514 bits (1325), Expect = e-144,   Method: Composition-based stats.
 Identities = 121/347 (34%), Positives = 211/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ +T+ +DL     +  E+   IKE      + +TP  A+L++  +PN P+ +Q 
Sbjct: 23  WQVKNR-ITNVEDLKKVINLTDEEEKGIKECLKTLRMGITPYYASLMDKDDPNCPVRKQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL+    + +DP+ ++  SP+ G+ HRYP+R+LL +  +C +YCR C RR   G 
Sbjct: 82  VPIMTELHKSDADMDDPLHEDADSPVPGLTHRYPNRVLLLITDMCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q  T +     +AA+ YI+   ++ +V+ +GGD L++S ++L+ ++  LR I+HV+I+R 
Sbjct: 141 QNDTAMPMDRIDAAIEYIRRTPEVRDVLLSGGDCLLVSDEKLEYIISKLREIEHVEIIRL 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL+  LK+   P+++  H NHP E +EE   A++ LA+AGI L +Q
Sbjct: 201 GSRTPVVMPQRITPELVGMLKKY-HPIWLNTHFNHPKELTEETKRALTLLADAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND   I+ +L+   V+ R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 260 SVLLRGVNDCVHIMRDLVHGLVKNRVRPYYIYQCDLSMGIEHFRTPVSKGIEIIEGLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK+ +  + +    +    + ++  ++  Y
Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPNYVVSQSHNKVILRNYEGVITTY 366


>gi|254781065|ref|YP_003065478.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus
           str. psy62]
 gi|254040742|gb|ACT57538.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus
           str. psy62]
          Length = 352

 Score =  511 bits (1318), Expect = e-143,   Method: Composition-based stats.
 Identities = 352/352 (100%), Positives = 352/352 (100%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF
Sbjct: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS
Sbjct: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF
Sbjct: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ
Sbjct: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK
Sbjct: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS
Sbjct: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352


>gi|257470355|ref|ZP_05634446.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
 gi|317064564|ref|ZP_07929049.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
 gi|313690240|gb|EFS27075.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185]
          Length = 415

 Score =  511 bits (1317), Expect = e-143,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 203/347 (58%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + S +DL     +  E+ + +K+      +A+TP   +L++ ++PN P+ +Q 
Sbjct: 24  WQVKNR-IESLEDLKKYITLSAEEEEGVKKTLETLRMAVTPYYFSLMDNNDPNCPVRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E++    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   G+
Sbjct: 83  IPSIKEIHQAEADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGA 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +     + A+ YI +  Q+ +V+ +GGD L++S + L+ ++  LR I HV+I+R 
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL++ LK+   P+++  H NHP E + E+  A   LANAGI L +Q
Sbjct: 202 GSRTPVVLPQRITPELVEMLKKY-HPIWLNTHFNHPKEVTPESKKACELLANAGIPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND   ++  L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 SVLLRGINDCVHVMKKLVHELVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +         + +   ++  Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQAPHKVVLRNFEGVITTY 367


>gi|167752794|ref|ZP_02424921.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216]
 gi|167659863|gb|EDS03993.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216]
          Length = 413

 Score =  511 bits (1316), Expect = e-143,   Method: Composition-based stats.
 Identities = 124/347 (35%), Positives = 206/347 (59%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + +  +L     +  E+ + I+E      +A+TP    LI+P NP+ PI +Q 
Sbjct: 21  WQVKNR-IETVDELKKYIKLTAEEEEGIRESLKTLRMAITPYYLTLIDPENPHCPIRKQA 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  EEL   P + EDP+ +++ SP+ G+ HRYPDR+L  +  +C +YCR C RR   G 
Sbjct: 80  IPTVEELKRSPADLEDPLHEDSDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 138

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q       K  +  + YI    Q+ +V+ +GGD L++S ++L+ ++  LR I HV+I+R 
Sbjct: 139 QHDCATPEKQIDDCIDYIARTPQVRDVLLSGGDALLVSDEKLEYIISRLRAIPHVEIIRI 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL+  LK+   P+++  H NHP E + E+  A +RLA+AGI L +Q
Sbjct: 199 GSRTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPNEVTPESKQACARLADAGIPLGNQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND   I+  L+   V++R++PYY++  DL+ G  HFR  + +G +I+ +L+  
Sbjct: 258 SVLLRGVNDCTHIMKKLVHELVKMRVRPYYIYICDLSLGIGHFRTPVSKGIEIIENLRGH 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK+ +  + +         + ++  ++  Y
Sbjct: 318 TSGYAVPTFVVDAPGGGGKIPVMPNYVISQAPNRVVLRNYEGVITTY 364


>gi|228469409|ref|ZP_04054423.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3]
 gi|228309093|gb|EEK17723.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3]
          Length = 421

 Score =  510 bits (1314), Expect = e-142,   Method: Composition-based stats.
 Identities = 128/351 (36%), Positives = 214/351 (60%), Gaps = 3/351 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + +   L     +  E+ + ++E      +A+TP   +LI+P++PNDP+ +Q 
Sbjct: 23  WQVRNR-IETLDQLKKYIKLTPEEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQS 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL++ PE++ DP+ ++  SP+ G+ HRYPDR+L  +  +C +YCR C RR   G 
Sbjct: 82  IPTINELHVSPEDQLDPLSEDEDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           QK      +  E  + YI++  ++ +V+ +GGD L++S K L+ +++ LR I HV+I+R 
Sbjct: 141 QKDAASPKERIEKCIEYIEQTPEVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL+Q L +   P+++  H NHP E + E+  A  R+ANAGI L +Q
Sbjct: 201 GSRTPVVCPQRITPELVQMLSKY-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND P I+ +L+   V++R++PYY++  DL+ G SHFR  + +G +I+ +L+  
Sbjct: 260 SVLLRGINDCPSIMKHLVHELVKMRVRPYYIYVCDLSRGISHFRTPVSKGIEIIEALRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
            SG   P +++D PGG GK  +  + +         + ++  ++  Y   S
Sbjct: 320 TSGYAVPTFVVDAPGGGGKTPVMPNYVISQSPHRVVLRNYEGVITTYTEPS 370


>gi|310658686|ref|YP_003936407.1| l-lysine 2,3-aminomutase [Clostridium sticklandii DSM 519]
 gi|308825464|emb|CBH21502.1| l-lysine 2,3-aminomutase [Clostridium sticklandii]
          Length = 414

 Score =  509 bits (1312), Expect = e-142,   Method: Composition-based stats.
 Identities = 126/347 (36%), Positives = 211/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + + ++L     +  E+ + +K   +   +A+TP   +LI+  NPNDP+ +Q 
Sbjct: 21  WQVRNR-IETVEELKKYIPLTPEEEEGVKRCLDTLRMAITPYYLSLIDVENPNDPVRKQA 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL+    ++EDP+ ++  SP+ G+ HRYPDR+LL +   C +YCR C RR   G 
Sbjct: 80  VPLSLELHRAASDQEDPLHEDGDSPVPGLTHRYPDRVLLLMTDQCSMYCRHCTRRRFAG- 138

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q  + + +K  +AA+ YI+   Q+ +V+ +GGD L++S ++L+  +K LR I HV+++R 
Sbjct: 139 QTDSAVDTKQIDAAIEYIKNTPQVRDVLLSGGDALLISDEKLEYTIKRLREIPHVEVIRI 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SRVP+V PQRI PEL+  LK+   PV++  H NHP E +EE+  A   LA+AGI L +Q
Sbjct: 199 GSRVPVVMPQRITPELVSMLKKY-HPVWLNTHFNHPNEITEESKRACELLADAGIPLGNQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL G+ND   ++  L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 258 SVLLAGVNDCMHVMKKLVNDLVKIRVRPYYIYQCDLSVGIEHFRTPVAKGIEIIEGLRGH 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P +++D PGG GK  +  + +    +    + +   ++  Y
Sbjct: 318 TSGYCVPTFVVDAPGGGGKTPVMPNYVISQNHNKVILRNFEGVITTY 364


>gi|331004173|ref|ZP_08327653.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str.
           F0167]
 gi|330411583|gb|EGG90993.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str.
           F0167]
          Length = 418

 Score =  509 bits (1312), Expect = e-142,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 212/347 (61%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLR++ +T+ + L     + +++ + +K    +  +A+TP   +LI+  + +DP+ +Q 
Sbjct: 23  WQLRNR-ITNVESLKKYIKLTEKEEEGVKRCLENLRMAITPYYLSLIDLEDEDDPVRKQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL+I   +  DP+ ++  SP+ G+ HRYPDR+L  +   C +YCR C RR   G 
Sbjct: 82  IPTVSELHIADADLADPLHEDTDSPVHGLTHRYPDRVLFLVTDQCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q  T + +   +A + YI+   ++ +V+ +GGD L++S+++L+ ++  LR I+HV+I+R 
Sbjct: 141 QNDTSVPTSQVDACIDYIRRHPEVRDVLLSGGDALLISNEKLEYIISELRKIEHVEIVRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL+  LK+   PV++  H NHP E ++E+  A +RLA+AGI L +Q
Sbjct: 201 GSRTPVVMPQRITPELVNMLKKY-HPVWLNTHFNHPSEITKESAEACARLADAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL G+ND   I+ +L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 260 TVLLAGVNDCVHIMTDLVHELVKIRVRPYYIYQCDLSQGLEHFRTPVSKGIEIIEGLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P +++D PGG GK  +  + +     G   + ++  ++  Y
Sbjct: 320 TSGYCVPTFVVDAPGGGGKTPVMPNYVISQSPGKVILRNYEGVITTY 366


>gi|313886286|ref|ZP_07820012.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332299776|ref|YP_004441697.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707]
 gi|312924231|gb|EFR35014.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I]
 gi|332176839|gb|AEE12529.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707]
          Length = 421

 Score =  508 bits (1309), Expect = e-142,   Method: Composition-based stats.
 Identities = 127/347 (36%), Positives = 213/347 (61%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + +   L     +  E+ + ++E      +A+TP   +LI+P++PNDP+ +Q 
Sbjct: 23  WQVRNR-IETLDQLKKYIKLTPEEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQS 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL++ PE++ DP+ ++  SP+ G+ HRYPDR+L  +  +C +YCR C RR   G 
Sbjct: 82  IPTINELHVSPEDQLDPLSEDEDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           QK      +  E  + YI++  ++ +V+ +GGD L++S K L+ +++ LR I HV+I+R 
Sbjct: 141 QKDAASPKERIEKCIEYIEQTPEVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL+Q L +   P+++  H NHP E + E+  A  R+ANAGI L +Q
Sbjct: 201 GSRTPVVCPQRITPELVQMLSKY-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND P I+ +L+   V++R++PYY++  DL+ G SHFR  + +G +I+ +L+  
Sbjct: 260 SVLLRGINDCPSIMMHLVHELVKMRVRPYYIYVCDLSQGISHFRTPVSKGIEIIEALRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK+ +    +         + ++  ++  Y
Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPTYVISQSPHRVVLRNYEGVITTY 366


>gi|225734347|pdb|2A5H|A Chain A, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
           Aminomutase From Clostridium Subterminale Sb4, With
           Michaelis Analog (L-Alpha-Lysine External Aldimine Form
           Of Pyridoxal-5'-Phosphate).
 gi|225734348|pdb|2A5H|B Chain B, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
           Aminomutase From Clostridium Subterminale Sb4, With
           Michaelis Analog (L-Alpha-Lysine External Aldimine Form
           Of Pyridoxal-5'-Phosphate).
 gi|225734349|pdb|2A5H|C Chain C, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
           Aminomutase From Clostridium Subterminale Sb4, With
           Michaelis Analog (L-Alpha-Lysine External Aldimine Form
           Of Pyridoxal-5'-Phosphate).
 gi|225734350|pdb|2A5H|D Chain D, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3-
           Aminomutase From Clostridium Subterminale Sb4, With
           Michaelis Analog (L-Alpha-Lysine External Aldimine Form
           Of Pyridoxal-5'-Phosphate)
          Length = 416

 Score =  508 bits (1308), Expect = e-142,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 204/347 (58%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + + ++L     + KE+ + + +       A+TP   +LI+P++PNDP+ +Q 
Sbjct: 22  WQVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRXAITPYYLSLIDPNDPNDPVRKQA 80

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   ELN    + EDP+ ++  SP+ G+ HRYPDR+LL +   C  YCR C RR   G 
Sbjct: 81  IPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDXCSXYCRHCTRRRFAGQ 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              +    +  + A+ YI+   Q+ +V+ +GGD L++S + L+ ++  LR I HV+I+R 
Sbjct: 141 SDDSXP-XERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI 199

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL+  LK+   PV++  H NHP E +EE+  A   LA+AG+ L +Q
Sbjct: 200 GSRTPVVLPQRITPELVNXLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQ 258

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND   +   L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 259 SVLLRGVNDCVHVXKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGH 318

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P +++D PGG GK  +  + +    +    + +   ++  Y
Sbjct: 319 TSGYCVPTFVVDAPGGGGKTPVXPNYVISQSHDKVILRNFEGVITTY 365


>gi|229496618|ref|ZP_04390332.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406]
 gi|229316515|gb|EEN82434.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406]
          Length = 418

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 211/351 (60%), Gaps = 3/351 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + +  DL     +  E+ + ++E      +A+TP   +LI+P++PNDP+ +Q 
Sbjct: 23  WQVKNR-IETLDDLKKYVTLTPEEEEGVRESLKSLRMAITPYYLSLIDPNDPNDPVRKQS 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL I  E++ DP+ ++  SP  G+ HRYPDR+L  +  +C +YCR C RR   G 
Sbjct: 82  VPTANELIISEEDQLDPLSEDEDSPTPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           QK      +  + A+ YI+   ++ +V+ +GGD L++S   ++ +L+ LR I HV+I+RF
Sbjct: 141 QKDAASPRERIDKAIEYIERTPEVRDVLLSGGDALMVSDSMIEYILQRLRAIDHVEIIRF 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL++ LK+   P+++  H NHP E + E+  A  RLANAG+ L +Q
Sbjct: 201 GSRTPVVLPQRITPELVEILKKY-HPIWLNTHFNHPNEITAESKEACERLANAGVPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GIND   ++  L+   V++R++PYY++  DL+ G  HFR  + +G +I+ +L+  
Sbjct: 260 TVLLRGINDCTYVMKKLVHELVKIRVRPYYIYVCDLSRGIGHFRTPVSKGIEIIENLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
            SG   P +++D PGG GK+ +  + I         + ++  ++  Y   +
Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPNYIVSQAPNRVVLRNYEGVLTTYTEPA 370


>gi|257463416|ref|ZP_05627811.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
 gi|317060981|ref|ZP_07925466.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
 gi|313686657|gb|EFS23492.1| lysine 2,3-aminomutase [Fusobacterium sp. D12]
          Length = 419

 Score =  506 bits (1304), Expect = e-141,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 199/347 (57%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + + +DL     + +E+ + + +      +A+TP   +LI+  +PN P+ +Q 
Sbjct: 24  WQVRNR-IETLEDLKQFANLSEEESEGVVKTLETLRMAITPYYFSLIDLEDPNCPVRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E++    +  DP+ ++  SP  G+ HRYPDR+LL +  +C +YCR C RR   G 
Sbjct: 83  IPTVQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQ 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              + +  +  +  + YI +  ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R 
Sbjct: 143 SDDS-MPMERIDKCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LA+AG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKRACEMLADAGVPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND   ++  LM   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 SVLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +         + +   ++  Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHKVILRNFEGVITTY 367


>gi|226315087|ref|YP_002774983.1| lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599]
 gi|226098037|dbj|BAH46479.1| probable lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599]
          Length = 454

 Score =  505 bits (1302), Expect = e-141,   Method: Composition-based stats.
 Identities = 117/350 (33%), Positives = 202/350 (57%), Gaps = 3/350 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     +  E+ + ++  +    + +TP  A+L++P +P+DP+  Q 
Sbjct: 30  WQLTH-TIKTVDDLKQVINLTPEEEEGVRISTQTIPLNITPYYAHLMDPDDPSDPVRMQS 88

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E+     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 89  VPLSSEMVRTKYDMEDPLHEDTDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 147

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +A + YI+ + ++ +V+ +GGD L+++ + L+ ++ +LR I HV+I+R 
Sbjct: 148 QIGMGVPKKQLDACIDYIRSRPEVRDVLLSGGDGLLINDRVLEYIISSLRDIPHVEIIRI 207

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   LK+   PV++  H NHP E + EA  A   LANAG+ L +Q
Sbjct: 208 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNHPKEITPEAKLACEMLANAGVPLGNQ 266

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND    +  L++  V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 267 AVILAGINDCANTMKKLVQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGIEIIEHLRGH 326

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SG   P +++D P G GK+ +  + I    +    + +   ++  YP  
Sbjct: 327 TSGYAVPTFVVDAPHGGGKIPVSPNYIISQASDKVVLRNFEGVITSYPEP 376


>gi|257451624|ref|ZP_05616923.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
 gi|257466940|ref|ZP_05631251.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918082|ref|ZP_07914322.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
 gi|317058188|ref|ZP_07922673.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
 gi|313683864|gb|EFS20699.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R]
 gi|313691957|gb|EFS28792.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 419

 Score =  505 bits (1301), Expect = e-141,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 197/347 (56%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + +  DL     +  E+ + + +      +A+TP   +LI+  +PN P+ +Q 
Sbjct: 24  WQVRNR-IETLDDLKQFANLSDEESEGVVKTLETLRMAITPYYFSLIDLDDPNCPVRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E++    +  DP+ ++  SP  G+ HRYPDR+LL +  +C +YCR C RR   G 
Sbjct: 83  IPTIQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQ 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              + +  +  +  + YI +  ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R 
Sbjct: 143 SDDS-MPMERIDRCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LANAG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKKACEMLANAGVPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND   ++  LM   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 SVLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +         + +   ++  Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHKVILRNFEGVITTY 367


>gi|239617353|ref|YP_002940675.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
           19.5.1]
 gi|239506184|gb|ACR79671.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
           19.5.1]
          Length = 426

 Score =  505 bits (1300), Expect = e-141,   Method: Composition-based stats.
 Identities = 132/347 (38%), Positives = 211/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ +T+ + L     I KE+ + IK       +A+TP  A L++P NP  PI RQ 
Sbjct: 23  WQVRNR-ITTVEQLKQVINITKEEEEGIKNCLKTLRMAITPYYATLMDPDNPKCPIRRQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P ++EL +   +  DP+ ++  SP+ G+ HRYPDR+LL +   C +YCR C RR   G 
Sbjct: 82  VPTEKELIVDRWDMLDPLHEDEDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q     + ++ + A+ YI+E  Q+ +V+ +GGD L++    L+ +LK LR I HV+I+R 
Sbjct: 141 QLDKPRTKREIDKAIEYIRETPQVRDVLLSGGDALLVDDSVLEYILKELRKIPHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL++ LK+   P+++  H NHP E + E+  A   LANAGI L +Q
Sbjct: 201 GSRTPVVLPQRITPELVKMLKKY-HPIWLNTHFNHPKEITPESAKACETLANAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND P I+  L+   V++R++PYY++  DL+ G  HFR +I +G  I+ SL   
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIAIMESLIGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P +++D PGG GK+++    +    + +  + ++  ++  Y
Sbjct: 320 TSGFCVPTFVVDAPGGGGKIRVMPQYVVSQSDRTVVLRNYEGVITTY 366


>gi|188586500|ref|YP_001918045.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179351187|gb|ACB85457.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 420

 Score =  503 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 125/347 (36%), Positives = 205/347 (59%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL ++ +T  + L     + +E+ + IK+      +A+TP  A+L++  +P+ PI R  
Sbjct: 25  WQLNNR-ITDVESLKEIINLTEEEEEGIKQTLKTIRMAITPYYASLMDKDDPSCPIRRHA 83

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   ELN    + EDP+ +++ SP++GI HRYPDR+L  +   C +YCR C RR + GS
Sbjct: 84  VPSSLELNFSEFDLEDPLSEDSDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRLAGS 143

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                   +  + A+ YI+   Q+ +V+ +GGD L++S +RL+ +L  L  I+HV+I+R 
Sbjct: 144 -TDKAAPIEVIDKAIDYIKNTPQVRDVLISGGDGLLISDERLEYILNELYKIEHVEIVRI 202

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   LI  LK+   P+++  H NHP E + EA  A+++LA+AGI L +Q
Sbjct: 203 GTRAPVVLPQRITDNLISILKKY-HPIWLNTHFNHPKEITSEAKEALAKLADAGIPLGNQ 261

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND P  +  L+   V+ R++PYY++  DL+ G  HFR ++  G +I+ SL+  
Sbjct: 262 SVLLRGINDCPVTMKELVHELVKNRVRPYYIYQCDLSQGIEHFRTSVSAGLEIIESLRGH 321

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +      S  + ++  ++  Y
Sbjct: 322 TSGYAVPTFVVDAPGGGGKTPVMPQYLISQSPDSVVLRNYEGVISKY 368


>gi|150392234|ref|YP_001322283.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149952096|gb|ABR50624.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 414

 Score =  503 bits (1297), Expect = e-140,   Method: Composition-based stats.
 Identities = 123/352 (34%), Positives = 211/352 (59%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + + +DL     +  ++ + I+E      + +TP  A+L++  + N P+  Q 
Sbjct: 23  WQVKNR-IATVEDLKKVIDLTSQEEEAIEECLQTLRMGITPYYASLMDKEDSNCPVRMQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL++   + +DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   G 
Sbjct: 82  VPIMSELSMGSADMDDPLHEDVDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q+ + +     +AA+ YI +  QI +V+ +GGD L+ S +RL+ ++  LR I+HV+I+R 
Sbjct: 141 QQDSGMPLDRIDAAIDYIAKTPQIRDVLLSGGDCLLASDERLEYIISKLRAIEHVEIIRL 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SRVP+V PQRI P L+  LK+   P+++  H NH  E ++E+  AI  LANAGI L +Q
Sbjct: 201 GSRVPVVMPQRITPSLVNMLKKY-HPIWLNTHFNHSKEITKESKEAIELLANAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKG+ND   I+ +L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 260 SVLLKGVNDCVHIMRDLVHDMVKMRVRPYYIYQCDLSRGIEHFRTPVAKGIEIIEGLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +    N    + ++  ++  Y    S
Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPNYVLSQSNNKVVLRNYEGVITTYTEPES 371


>gi|256846428|ref|ZP_05551885.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2]
 gi|256718197|gb|EEU31753.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2]
          Length = 425

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 200/347 (57%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ L S +DL     + +E+ + +        +A+TP   +LI+ ++   PI +Q 
Sbjct: 24  WQVKNR-LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E++    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS
Sbjct: 83  IPTIQEIHQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +     + A+ YI +  Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R 
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LA+AGI L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+ND   ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 TVLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +     G   + +   ++  Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367


>gi|34763498|ref|ZP_00144440.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|237741285|ref|ZP_04571766.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13]
 gi|294784507|ref|ZP_06749796.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27]
 gi|27886827|gb|EAA23958.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii
           ATCC 49256]
 gi|229430817|gb|EEO41029.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13]
 gi|294487723|gb|EFG35082.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27]
          Length = 425

 Score =  503 bits (1295), Expect = e-140,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 200/347 (57%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ L S +DL     + +E+ + +        +A+TP   +LI+ ++   PI +Q 
Sbjct: 24  WQVKNR-LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E++    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS
Sbjct: 83  IPTIQEIHQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +     + A+ YI +  Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R 
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LA+AGI L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+ND   ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 TVLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +     G   + +   ++  Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367


>gi|294500786|ref|YP_003564486.1| KamA family protein [Bacillus megaterium QM B1551]
 gi|294350723|gb|ADE71052.1| KamA family protein [Bacillus megaterium QM B1551]
          Length = 470

 Score =  502 bits (1293), Expect = e-140,   Method: Composition-based stats.
 Identities = 119/352 (33%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + ++  +    + +TP  A+L+NP +P  P+  Q 
Sbjct: 31  WQLTN-TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +EL+    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPVGKELHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI +  ++ +V+ +GGD L+++   L+ +LK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   L++   PV++  H N   E +EE   A   L +AG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + I         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379


>gi|237743425|ref|ZP_04573906.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1]
 gi|260494967|ref|ZP_05815096.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33]
 gi|229433204|gb|EEO43416.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1]
 gi|260197410|gb|EEW94928.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33]
          Length = 425

 Score =  501 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 198/347 (57%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ +    DL     +  E+ + +KE      +A+TP   +LI+  +   PI +Q 
Sbjct: 24  WQVKNR-IEKLDDLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E++    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS
Sbjct: 83  IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +     + A+ YI +  Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R 
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LA+AGI L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+ND   ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 TVLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +         + +   ++  Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367


>gi|34540806|ref|NP_905285.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83]
 gi|188995030|ref|YP_001929282.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277]
 gi|34397120|gb|AAQ66184.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83]
 gi|188594710|dbj|BAG33685.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277]
          Length = 416

 Score =  501 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 128/347 (36%), Positives = 207/347 (59%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ + +   L     +  E+ + +KE      +A+TP   +LI+P NPN PI +Q 
Sbjct: 23  WQVLNR-IETLDQLKKYVTLTAEEEEGVKESLKVLRMAITPYYLSLIDPENPNCPIRKQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +EL   PE++ DP+ ++  SP+ G+ HRYPDR+L  +   C +YCR C RR   G 
Sbjct: 82  IPTHQELVRAPEDQVDPLSEDEDSPVPGLTHRYPDRVLFLITDKCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           QK     S+  +  + YI     + +V+ +GGD L++S +RL+ +LK LR I HV+I+R 
Sbjct: 141 QKDASSPSERIDRCIDYIANTPTVRDVLLSGGDALLVSDERLEYILKRLREIPHVEIVRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI P+L+  LK+   PV++  H NHP E +EEA+ A  R+ANAGI L +Q
Sbjct: 201 GSRTPVVLPQRITPQLVDMLKKY-HPVWLNTHFNHPNEVTEEAVEACERMANAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GIND   ++  L+   V++R++PYY++  DL+ G  HFR  + +G +I+ +L+  
Sbjct: 260 TVLLRGINDCTHVMKRLVHLLVKMRVRPYYIYVCDLSLGIGHFRTPVSKGIEIIENLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK+ +  + +         + ++  ++  Y
Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPNYVVSQSPRHVVLRNYEGVITTY 366


>gi|326391509|ref|ZP_08213042.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325992438|gb|EGD50897.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 423

 Score =  501 bits (1292), Expect = e-140,   Method: Composition-based stats.
 Identities = 127/347 (36%), Positives = 212/347 (61%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + + ++L     + +E+ + I +      +A+TP   +LI+P++PNDPI ++ 
Sbjct: 29  WQIRNR-IETVEELKKYLPLTQEEEEAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRA 87

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL    E+  DP+ ++  SP+ G+ HRYPDR+LL +   C +YCR C RR   G 
Sbjct: 88  VPTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 146

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q    L     E A+ YI +  QI +V+ +GGDPL LS  RL++++K LR I HV+I+R 
Sbjct: 147 QTDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRI 206

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            S  P+V PQRI PEL+  LK+   P+++  H NHP+E +E++  A   LA+AGI L +Q
Sbjct: 207 GSSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQ 265

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+ND   ++  L+   V++R++PYY++  DL+ G SHFR  + +G +I+ +L+  
Sbjct: 266 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGH 325

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P +++D PGG GK+ +  + +    +    + ++  ++  Y
Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTY 372


>gi|256026982|ref|ZP_05440816.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
 gi|289764966|ref|ZP_06524344.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
 gi|289716521|gb|EFD80533.1| lysine 2,3-aminomutase [Fusobacterium sp. D11]
          Length = 425

 Score =  501 bits (1291), Expect = e-140,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 197/347 (56%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ +    DL     +  E+ + +KE      +A+TP   +LI+  +   PI +Q 
Sbjct: 24  WQVKNR-IEKLDDLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E+     +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS
Sbjct: 83  IPTIQEIYQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +     + A+ YI +  Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R 
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LA+AGI L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+ND   ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 TVLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +         + +   ++  Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367


>gi|295706131|ref|YP_003599206.1| KamA family protein [Bacillus megaterium DSM 319]
 gi|294803790|gb|ADF40856.1| KamA family protein [Bacillus megaterium DSM 319]
          Length = 470

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 119/352 (33%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + ++  +    + +TP  A+L+NP +P  P+  Q 
Sbjct: 31  WQLTN-TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +EL+    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPVGKELHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI +  ++ +V+ +GGD L+++   L+ +LK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   L++   PV++  H N   E +EE   A   L +AG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + I         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379


>gi|20807210|ref|NP_622381.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
 gi|254478895|ref|ZP_05092258.1| KamA family protein [Carboxydibrachium pacificum DSM 12653]
 gi|20515713|gb|AAM23985.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
 gi|214035161|gb|EEB75872.1| KamA family protein [Carboxydibrachium pacificum DSM 12653]
          Length = 417

 Score =  500 bits (1289), Expect = e-139,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 210/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ + + ++L     + +E+ + I +      +A+TP   +LI+P++PNDPI ++ 
Sbjct: 23  WQIANR-IETVEELKKYLPLSEEEEEAISKALQKLRMAITPYYLSLIDPNDPNDPIRKRA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL   PE+  DP+ ++  SP+ G+ HRYPDR+L+ +   C +YCR C RR   G 
Sbjct: 82  VPTIHELYQAPEDLVDPLYEDVDSPVPGLTHRYPDRVLMLVTDQCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +    +     E  + YI+   QI +V+ +GGDPL LS  RL++++K LR I HV+I+R 
Sbjct: 141 ETDAPMPMDKIEKQIEYIRNTPQIRDVLISGGDPLTLSDSRLEEIIKRLREIPHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            S VP+V P RI PEL+  LK+   P+++  H NHP+E +E++  A   LA+AGI L +Q
Sbjct: 201 GSSVPVVLPMRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSKRACEMLADAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+ND   ++  L+   V++R++PYY++  DL+ G SHFR  + +G +I+  L+  
Sbjct: 260 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSFGLSHFRTPVSKGIEIIEGLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P +++D PGG GK+ +  + +    +    + ++  ++  Y
Sbjct: 320 TSGYCVPTFVVDAPGGGGKIPVGPNYVISQSHDKIVLRNYEGVIVTY 366


>gi|73668214|ref|YP_304229.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro]
 gi|72395376|gb|AAZ69649.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro]
          Length = 414

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 126/354 (35%), Positives = 205/354 (57%), Gaps = 5/354 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH+ + + ++L     + + + ++IK+    + +A++P  A+LI+P +PN PI  Q 
Sbjct: 16  WQYRHR-IETVEELEKLIKLSEPEKEDIKKALEVFPMAISPYYASLIDPKDPNCPIRMQA 74

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           +P   EL     E EDP+ ++  SP +   I HRYPDR+L  + + C +YCR C R+  V
Sbjct: 75  VPSSAELKKSSWELEDPLCEDRDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 134

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G  +    S K     + YI+E S+I +V+ +GGD L++S +RL  +L  L  I HV+I+
Sbjct: 135 G-NREYDYSEKAIREGIEYIREHSEIRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIV 193

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  SRVP+  PQRI PEL + L++    V++  H NHP E + EA  A+  LA AG+ L 
Sbjct: 194 RLGSRVPVTLPQRITPELCEILEKYP-SVWLNTHFNHPKEITPEAKKAMRMLAKAGVPLG 252

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +QSVLL+G+ND P I+  L    ++++ +PYYL+  DL+ G  HFR  +  G +I+  L+
Sbjct: 253 NQSVLLRGVNDCPMIIKKLCHELLKIKTRPYYLYQCDLSFGLEHFRTPVSRGIEIIEMLR 312

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
              SGL  P +++D PGG GK+ +  + +    +    + ++  ++  YP   +
Sbjct: 313 GHTSGLAVPTFVIDAPGGGGKIPVGPNYLISSSDTGVVLRNYEGVICMYPEPEA 366


>gi|194016677|ref|ZP_03055290.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061]
 gi|194011283|gb|EDW20852.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061]
          Length = 466

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 124/350 (35%), Positives = 205/350 (58%), Gaps = 3/350 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ + +DL     + +E+ + +K  +    + +TP  A+L+NP +P  P+  Q 
Sbjct: 31  WQLTH-TVKTLEDLEKVVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL+    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+ YI+E  ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  EL + LK+   PV++  H N   E ++EA  A  RL NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SG   P +++D PGG GK+ +  + +         + +   ++  YP  
Sbjct: 328 TSGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYPEP 377


>gi|157692660|ref|YP_001487122.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032]
 gi|157681418|gb|ABV62562.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032]
          Length = 466

 Score =  500 bits (1288), Expect = e-139,   Method: Composition-based stats.
 Identities = 124/350 (35%), Positives = 205/350 (58%), Gaps = 3/350 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ + +DL     + +E+ + +K  +    + +TP  A+L+NP +P  P+  Q 
Sbjct: 31  WQLTH-TVKTLEDLEKIVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL+    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+ YI+E  ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  EL + LK+   PV++  H N   E ++EA  A  RL NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SG   P +++D PGG GK+ +  + +         + +   ++  YP  
Sbjct: 328 TSGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYPEP 377


>gi|307265361|ref|ZP_07546918.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306919645|gb|EFN49862.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 423

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 127/347 (36%), Positives = 211/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + + ++L     + +E+   I +      +A+TP   +LI+P++PNDPI ++ 
Sbjct: 29  WQIRNR-IETVEELKKYLPLTQEEEQAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRA 87

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL    E+  DP+ ++  SP+ G+ HRYPDR+LL +   C +YCR C RR   G 
Sbjct: 88  VPTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFSG- 146

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q    L     E A+ YI +  QI +V+ +GGDPL LS  RL++++K LR I HV+I+R 
Sbjct: 147 QTDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRI 206

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            S  P+V PQRI PEL+  LK+   P+++  H NHP+E +E++  A   LA+AGI L +Q
Sbjct: 207 GSSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQ 265

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+ND   ++  L+   V++R++PYY++  DL+ G SHFR  + +G +I+ +L+  
Sbjct: 266 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGH 325

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P +++D PGG GK+ +  + +    +    + ++  ++  Y
Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTY 372


>gi|19705171|ref|NP_602666.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296328274|ref|ZP_06870803.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
 gi|19713110|gb|AAL93965.1| Lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 25586]
 gi|296154578|gb|EFG95366.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum
           ATCC 23726]
          Length = 425

 Score =  500 bits (1287), Expect = e-139,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 199/347 (57%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ L S +DL     + +E+ + +        +A+TP   +LI+ ++   PI +Q 
Sbjct: 24  WQVKNR-LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E++    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS
Sbjct: 83  IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +     + A+ YI +  Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R 
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LA+AG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GIND   ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +         + +   ++  Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367


>gi|311068654|ref|YP_003973577.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942]
 gi|310869171|gb|ADP32646.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942]
          Length = 472

 Score =  499 bits (1286), Expect = e-139,   Method: Composition-based stats.
 Identities = 121/350 (34%), Positives = 205/350 (58%), Gaps = 3/350 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  +L     + +E+ + ++  +    + +TP  A+L+NP NP  PI  Q 
Sbjct: 31  WQLTH-TVRTLDELKKVIHLTEEEEEGVRISTKTIPLNITPYYASLMNPDNPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++I+R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L + LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SG   P +++D PGG GK+ +  + +         + +   ++  YP  
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEP 377


>gi|294499134|ref|YP_003562834.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551]
 gi|294349071|gb|ADE69400.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551]
          Length = 469

 Score =  499 bits (1285), Expect = e-139,   Method: Composition-based stats.
 Identities = 123/352 (34%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ + +DL     +  ++ + +K  +    + +TP  A L++ ++P  PI  Q 
Sbjct: 31  WQLTN-TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDENDPKCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL+    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+ YI    QI +V+ +GGD L+++   L+ +LK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   LK+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  I +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +I+D PGG GK+ +  + I    +    + +   ++  YP   +
Sbjct: 328 TSGYAVPTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYPEPQN 379


>gi|296329460|ref|ZP_06871947.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674784|ref|YP_003866456.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296153342|gb|EFG94204.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305413028|gb|ADM38147.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 471

 Score =  498 bits (1283), Expect = e-139,   Method: Composition-based stats.
 Identities = 118/352 (33%), Positives = 207/352 (58%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +++ + ++  +    + +TP  A+L++P NP  P+  Q 
Sbjct: 31  WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++++R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  +L + LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDQLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKIILRNFEGVITSYPEPEN 379


>gi|321311619|ref|YP_004203906.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5]
 gi|320017893|gb|ADV92879.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5]
          Length = 471

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 118/352 (33%), Positives = 206/352 (58%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +++ + ++  +    + +TP  A+L++P NP  P+  Q 
Sbjct: 31  WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++++R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L + LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEPEN 379


>gi|52080665|ref|YP_079456.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580]
 gi|52786038|ref|YP_091867.1| hypothetical protein BLi02294 [Bacillus licheniformis ATCC 14580]
 gi|319645375|ref|ZP_07999608.1| KamA protein [Bacillus sp. BT1B_CT2]
 gi|52003876|gb|AAU23818.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580]
 gi|52348540|gb|AAU41174.1| KamA [Bacillus licheniformis ATCC 14580]
 gi|317393184|gb|EFV73978.1| KamA protein [Bacillus sp. BT1B_CT2]
          Length = 469

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 120/352 (34%), Positives = 204/352 (57%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ + +DL     + KE+ + ++  +    + +TP  A+L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TVRTLEDLKKVVNLTKEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLAEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+ YI++   + +V+ +GGD L+++ + L+ +LK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDQAIGYIRDTPDVRDVLISGGDGLLINDQILEYILKNLRAIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  +L   LK+   PV++  H N   E ++EA  A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDKLCSILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ I  + +         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIAIQPNYLISQSPDKVVLRNFEGVITSYPEPEN 379


>gi|291484572|dbj|BAI85647.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. natto BEST195]
          Length = 471

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 118/352 (33%), Positives = 206/352 (58%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +++ + ++  +    + +TP  A+L++P NP  P+  Q 
Sbjct: 31  WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++++R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L + LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVTLRNFEGVITSYPEPEN 379


>gi|262066228|ref|ZP_06025840.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693]
 gi|291380084|gb|EFE87602.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693]
          Length = 425

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 197/347 (56%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ +    DL     +  E+ + +        +A+TP   +LI+ ++   P+ +Q 
Sbjct: 24  WQVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPVRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E++    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS
Sbjct: 83  IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +     + A+ YI +  Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R 
Sbjct: 143 SDD-AMPMDRIDRAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLREIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LANAG+ L +Q
Sbjct: 202 GTRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLANAGVPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GIND   ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +     G   + +   ++  Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367


>gi|254303334|ref|ZP_04970692.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
 gi|148323526|gb|EDK88776.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953]
          Length = 425

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 196/347 (56%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ +    DL     +  E+ + +        +A+TP   +LI+ ++   PI +Q 
Sbjct: 24  WQVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPIRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E++    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS
Sbjct: 83  IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +     + A+ YI +  Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R 
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LA+AG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GIND   ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +         + +   ++  Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367


>gi|16079027|ref|NP_389850.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221309872|ref|ZP_03591719.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221314195|ref|ZP_03596000.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221319118|ref|ZP_03600412.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221323391|ref|ZP_03604685.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|4033499|sp|O34676|KAMA_BACSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName:
           Full=KAM
 gi|2415401|gb|AAB72069.1| YodO [Bacillus subtilis]
 gi|2634361|emb|CAB13860.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168]
          Length = 471

 Score =  498 bits (1282), Expect = e-139,   Method: Composition-based stats.
 Identities = 118/352 (33%), Positives = 206/352 (58%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +++ + ++  +    + +TP  A+L++P NP  P+  Q 
Sbjct: 31  WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++++R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L + LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEPEN 379


>gi|295704462|ref|YP_003597537.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319]
 gi|294802121|gb|ADF39187.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319]
          Length = 469

 Score =  497 bits (1281), Expect = e-138,   Method: Composition-based stats.
 Identities = 122/352 (34%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ + +DL     +  ++ + +K  +    + +TP  A L++ ++P  PI  Q 
Sbjct: 31  WQLTN-TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDVNDPKCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL+    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+ YI    QI +V+ +GGD L+++   L+ +LK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   LK+   PV++  H N   E +EE+  A   L+NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLSNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  I +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +I+D PGG GK+ +  + I    +    + +   ++  YP   +
Sbjct: 328 TSGYAVPTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYPEPQN 379


>gi|237739441|ref|ZP_04569922.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31]
 gi|229423049|gb|EEO38096.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31]
          Length = 425

 Score =  496 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 196/347 (56%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ +    DL     +  E+ + +        +A+TP   +LI+ ++   PI +Q 
Sbjct: 24  WQVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPIRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E++    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS
Sbjct: 83  IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +     + A+ YI +  Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R 
Sbjct: 143 SDD-AMPMDRIDRAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LA+AG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GIND   ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +         + +   ++  Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367


>gi|188587476|ref|YP_001919021.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179352163|gb|ACB86433.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 416

 Score =  496 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 126/347 (36%), Positives = 207/347 (59%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +T  + L     +  ++ + I++      +A+TP  A+L++  +P+ PI RQ 
Sbjct: 21  WQLKNR-ITDLESLKEIINLTDKEEEGIQQALKTLRMAITPYYASLMDKDDPSCPIRRQA 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   ELN    + EDP+ ++  SP++GI HRYPDR+L  +   C +YCR C RR + G+
Sbjct: 80  VPSSLELNFGDSDLEDPLSEDTDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRIAGT 139

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                   +  + A+ YI+   ++ +V+ +GGD LI+S +RL+ +L  L  I+HV+I+R 
Sbjct: 140 -TDKAAPKEVVDNAIEYIKNTPRVRDVLISGGDGLIISDERLEYILDQLYKIEHVEIIRI 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  +L+  LK+   PV++  H NHP E + EA  A+++LA+AGI L +Q
Sbjct: 199 GTRAPVVLPQRITDDLVSILKKY-HPVWLNTHYNHPKELTSEAQKALAKLADAGIPLGNQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKGIND P  + NL+   V+ R++PYY++  DL+ G  HFR ++  G +IV  L+  
Sbjct: 258 SVLLKGINDCPGTMKNLVHELVKHRVRPYYIYQCDLSQGIEHFRTSVSAGLEIVEHLRGH 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P Y++D PGG GK+ +    +      S  + ++  ++  Y
Sbjct: 318 TSGFAVPTYVVDAPGGGGKIPVMPQYLISQSPESVILRNYEGVIAKY 364


>gi|311030470|ref|ZP_07708560.1| L-lysine 2,3-aminomutase [Bacillus sp. m3-13]
          Length = 473

 Score =  496 bits (1279), Expect = e-138,   Method: Composition-based stats.
 Identities = 122/352 (34%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ + +DL     +  E+ + +K  +    + +TP  A+L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIRTLEDLKQVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E+     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISKEIYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI    QI + + +GGD L+++ + L+ +LK LR I H++I+R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIASNDQIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   LK+   PV++  H N   E +EE+  A   L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKLACEMLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  I +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + I         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIAVQPNYIISQSANKVVLRNFEGVITTYPEPEN 379


>gi|89097814|ref|ZP_01170701.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911]
 gi|89087316|gb|EAR66430.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911]
          Length = 495

 Score =  496 bits (1278), Expect = e-138,   Method: Composition-based stats.
 Identities = 119/352 (33%), Positives = 203/352 (57%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ + +DL     +  E+ + +K  +    + +TP  A+L+NP +P  P+  Q 
Sbjct: 55  WQLTN-TIRNLEDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 113

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 114 VPISQEIHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 172

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI+   ++ +V+ +GGD L+++ K L+ +LK LR I HV+I+R 
Sbjct: 173 QIGMGVPKKQLDDAIAYIRNTPEVRDVLISGGDGLLINDKILEYILKNLREIDHVEIIRI 232

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   LK+   P+++  H N   E +EEA  A   LA+AG+ + +Q
Sbjct: 233 GTRAPVVFPQRITENLCNILKKY-HPIWLNTHFNTSIEITEEAKKACEMLADAGVPVGNQ 291

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 292 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 351

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 352 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSAEKTVLRNFEGVITTYPEPEN 403


>gi|228991284|ref|ZP_04151242.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442]
 gi|228997381|ref|ZP_04157001.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17]
 gi|229005016|ref|ZP_04162741.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
 gi|228756220|gb|EEM05540.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
 gi|228762340|gb|EEM11266.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17]
 gi|228768508|gb|EEM17113.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442]
          Length = 482

 Score =  496 bits (1277), Expect = e-138,   Method: Composition-based stats.
 Identities = 125/352 (35%), Positives = 202/352 (57%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A+L+NP +P  PI  Q 
Sbjct: 41  WQLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQS 99

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 100 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 158

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 159 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 218

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 219 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 277

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 278 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 337

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 338 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 389


>gi|294783510|ref|ZP_06748834.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA]
 gi|294480388|gb|EFG28165.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA]
          Length = 425

 Score =  495 bits (1276), Expect = e-138,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 196/347 (56%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ +    DL     +  E+ + +        +A+TP   +LI+ ++   P+ +Q 
Sbjct: 24  WQVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPVRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E++    +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   GS
Sbjct: 83  IPTIQEIHQADADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +     + A+ YI +  Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R 
Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLREIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL   LK+   P+++  H NHP E + EA  A   LANAG+ L +Q
Sbjct: 202 GSRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLANAGVPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GIND   ++  L+   V +R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +         + +   ++  Y
Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367


>gi|229085246|ref|ZP_04217488.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44]
 gi|228697965|gb|EEL50708.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44]
          Length = 482

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 124/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A+L+NP +P  PI  Q 
Sbjct: 41  WQLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQS 99

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 100 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 158

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI +  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 159 QIGMGVPKKQLDDAIAYISQTPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 218

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 219 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 277

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 278 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 337

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 338 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 389


>gi|258513921|ref|YP_003190143.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257777626|gb|ACV61520.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 427

 Score =  495 bits (1274), Expect = e-138,   Method: Composition-based stats.
 Identities = 125/352 (35%), Positives = 205/352 (58%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLR++ ++S  +L     +   +   I++  + + +A+TP  A+LIN  +   PI  Q 
Sbjct: 21  WQLRNRIMSS-DELDQYANLSVYEKASIQKAIDVFPMAITPYYASLINKDDSTCPIRMQC 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +EL     + +DP+ ++  SP  G+ HRYPDR+LL + + C +YCR C R+  VG 
Sbjct: 80  IPNPKELIKGSGDMDDPLHEDGDSPCPGLTHRYPDRVLLLVTNECSMYCRHCTRKRKVGD 139

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
               V    D   A+ YI+    I +V+ +GGDP +LS  RL+++++ +R I HVQ++R 
Sbjct: 140 -NEKVSKDSDIIKAIEYIKAHPDIRDVLLSGGDPFVLSTNRLEQIIRRVREIPHVQVIRI 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L++ LK+   P++I  H NHP EF+EE+  A+++LA+AGI L +Q
Sbjct: 199 GTRTPVVMPQRITDHLVKMLKKY-HPIWINTHFNHPREFTEESARALAKLADAGIPLGNQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGIND   I+  L    V  R++PYYL+  DL+ G  HFR  + +G +I+ +L   
Sbjct: 258 TVLLKGINDCAFIIKKLAHLLVSNRVRPYYLYQCDLSRGIEHFRTPVSKGVEIMEALIGH 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  +      +    + ++  ++  Y   ++
Sbjct: 318 TSGFAVPTFVVDAPGGGGKIPVLPNYQLSSTSTKTVLRNYEGVICIYEEPAN 369


>gi|20092773|ref|NP_618848.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A]
 gi|19918069|gb|AAM07328.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A]
          Length = 419

 Score =  494 bits (1273), Expect = e-138,   Method: Composition-based stats.
 Identities = 124/353 (35%), Positives = 201/353 (56%), Gaps = 5/353 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q R++ +T+ ++L     +   +  +IK+    +S+A++P  A+LI+P +P  PI  Q 
Sbjct: 21  WQYRNR-ITTVEELEKLIPLSDPEKADIKKALEVFSMAISPYYASLIDPEDPKCPIRMQA 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           +P   EL     E EDP+ ++  SP K   I HRYPDR+L  + + C +YCR C R+  V
Sbjct: 80  VPLSAELQKSSWELEDPLCEDLDSPSKESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 139

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G  +    S K     + YI+E  ++ +V+ +GGD L++S +RL  +L  L  I HV+I+
Sbjct: 140 G-NREYDYSEKTIREGIEYIREHPEVRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIV 198

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  +R P+  PQRI PEL + L +    V++  H NHP E + EA  A+  LA AGI L 
Sbjct: 199 RIGTRAPVTLPQRITPELCEILGKYP-SVWLNTHFNHPKEITSEAKKAMGMLARAGIPLG 257

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +QSVLL+G+ND P I+  L    + ++ +PYYL+  DL+ G  HFR ++  G +I+  L+
Sbjct: 258 NQSVLLRGVNDCPMIIKKLCHELLRIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEMLR 317

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
              SGL  P +++D PGG GK+ +  + +    +    + ++  ++  YP  +
Sbjct: 318 GHTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICMYPEPA 370


>gi|152975473|ref|YP_001374990.1| lysine 2,3-aminomutase YodO family protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152024225|gb|ABS21995.1| lysine 2,3-aminomutase YodO family protein [Bacillus cytotoxicus
           NVH 391-98]
          Length = 472

 Score =  494 bits (1273), Expect = e-138,   Method: Composition-based stats.
 Identities = 125/352 (35%), Positives = 202/352 (57%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A+L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDEAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIMKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379


>gi|319651187|ref|ZP_08005318.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2]
 gi|317397116|gb|EFV77823.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2]
          Length = 476

 Score =  494 bits (1273), Expect = e-138,   Method: Composition-based stats.
 Identities = 119/352 (33%), Positives = 201/352 (57%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  ++ + ++  +    + +TP  A+L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIRTVDDLKKVINLTPDEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E+     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISKEIYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA++YI+   Q+ +V+ +GGD L+++   L+ +LK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDAAISYIRSAPQVRDVLISGGDGLLINDNILEYILKNLREIDHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   LK+   PV++  H N   E +E++  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEDSKRACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SV+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 SVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKISLQPNYLISQSADKVVLRNFEGVITTYPEPEN 379


>gi|298372919|ref|ZP_06982909.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298275823|gb|EFI17374.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 411

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 202/347 (58%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + + + L     +  E+ + +KE      +A+TP   +LI+  NPN P+ +Q 
Sbjct: 22  WQVQNR-IETLEQLKKYIKLTTEEENGVKESLKTLRMAITPYYLSLIDQSNPNCPVRKQA 80

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   E +    +  DP+ ++  SP  G+ HRYPDR+LL +  +C +YCR C RR   G 
Sbjct: 81  IPTHAETHHSAADLLDPLHEDGDSPAPGLTHRYPDRVLLLVTDMCSMYCRHCTRRRFAG- 139

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q  +  S  D   A+ YI    Q+ +V+ +GGD L++S  RL+ ++  LR I HV+I+R 
Sbjct: 140 QTDSSSSKDDISKAIDYIARTPQVRDVLLSGGDALMISDTRLESIISRLREIPHVEIIRI 199

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  +L+  LK+   P+++  H NHP E +EE+IAA  R+ANAGI L +Q
Sbjct: 200 GTRTPVVCPQRITDDLVNMLKKY-HPIWLNTHFNHPQEVTEESIAACERMANAGIPLGNQ 258

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND    +  L+   V++R++PYY++  DL+ G  HFR  + +G +I+ +L+  
Sbjct: 259 SVLLRGVNDCVPTMKKLVHQLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIENLRGH 318

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +  + +   G     + +   ++  Y
Sbjct: 319 TSGYAVPTFVVDAPGGGGKTPVMPNYVISQGPHKVILRNFEGVITTY 365


>gi|2529467|gb|AAB81159.1| YokS [Bacillus subtilis subsp. subtilis str. 168]
          Length = 471

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 117/352 (33%), Positives = 205/352 (58%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +++ + ++  +    + +TP  A+L++P NP  P+  Q 
Sbjct: 31  WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  S + G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLHEDEDSRVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++++R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L + LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEPEN 379


>gi|154686384|ref|YP_001421545.1| hypothetical protein RBAM_019520 [Bacillus amyloliquefaciens FZB42]
 gi|154352235|gb|ABS74314.1| KamA [Bacillus amyloliquefaciens FZB42]
          Length = 473

 Score =  494 bits (1272), Expect = e-137,   Method: Composition-based stats.
 Identities = 122/352 (34%), Positives = 206/352 (58%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +E+ + ++       + +TP  A+L++P NP  PI  Q 
Sbjct: 31  WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++I+R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L + LK+   PV++  H N   E +EE++AA  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIELTEESVAACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            +G   P +++D PGG GK+ +  + +         I +   ++  YP   +
Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYPEPEN 379


>gi|328553134|gb|AEB23626.1| L-lysine 2,3-aminomutase [Bacillus amyloliquefaciens TA208]
 gi|328912092|gb|AEB63688.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens LL3]
          Length = 473

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 122/352 (34%), Positives = 205/352 (58%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +E+ + ++       + +TP  A+L++P NP  PI  Q 
Sbjct: 31  WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++I+R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L Q LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            +G   P +++D PGG GK+ +  + +         I +   ++  YP   +
Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYPEPEN 379


>gi|154248906|ref|YP_001409731.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium
           nodosum Rt17-B1]
 gi|154152842|gb|ABS60074.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium
           nodosum Rt17-B1]
          Length = 422

 Score =  493 bits (1270), Expect = e-137,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 211/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ +     L     +  E+ + ++       +A+TP  A+L++P NP  PI RQ 
Sbjct: 24  WQIRNRIM-DVDTLKQVINLTPEEEEGVRNALKTLRMAITPYYASLMDPDNPKCPIRRQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +EL     +  DP+ ++  SP+ G+ HRYPDR+L+ +  +C +YCR C RR   G 
Sbjct: 83  VPTAKELFTSQWDMTDPLHEDEDSPVPGLTHRYPDRVLMLVTDMCSMYCRHCTRRRFAG- 141

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q     + ++ +A + Y++E  Q+ +V+ +GGD L++  + L+ +LK LR IKHV+I+R 
Sbjct: 142 QHDRARTKQEIDAMIEYVRETPQVRDVLISGGDGLLVGIEMLEYILKELRKIKHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQ I PEL   LK+   P++I  H NHP E + E+  A   LA+AGI L +Q
Sbjct: 202 GTRTPVVLPQMITPELTNMLKKY-HPIWINTHFNHPKEITPESSRACEMLADAGIPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND P I+  L+   V++R++PYY++  DL+ G +HFR ++++G +I+ +L   
Sbjct: 261 SVLLRGINDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGLTHFRTSVKKGLEIMEALIGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P++++D P G GK+++  + +  + + +  + ++  ++  Y
Sbjct: 321 TSGFCVPWFVVDAPAGGGKIRVMPNYVISMSDHTVILRNYEGVIVAY 367


>gi|189500579|ref|YP_001960049.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
           phaeobacteroides BS1]
 gi|189496020|gb|ACE04568.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
           phaeobacteroides BS1]
          Length = 437

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 128/355 (36%), Positives = 205/355 (57%), Gaps = 6/355 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+RH  K L + + L +   + ++Q     + +  + I++TP   +LIN  +  NDP+ 
Sbjct: 28  WQMRHSIKDLETFEALLDV-KLSEKQRKAFGKAAEKFPISITPYYLSLINTEDMENDPVF 86

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q +P   ELNI+  +  DP+ +++ SP   + HRYPDR+LL + +VCP+YCR C R+  
Sbjct: 87  LQSVPSPLELNIVKGDMSDPLHEDSDSPAPCVTHRYPDRVLLLVSNVCPMYCRHCTRKRK 146

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG +  T+      E  + YI+   QI +V+ +GGDP +LS   L  +L  LR I+HV+I
Sbjct: 147 VGDE-DTIPKRSAIEQGIRYIRNNPQIRDVLLSGGDPFLLSDDYLDWILSELRKIEHVEI 205

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V P RI  +L+  LK+  +PV++  H NH  E ++ A  A+  LA+ G+ L
Sbjct: 206 IRIGTRTPVVLPCRITSDLVAILKKH-QPVWVNTHFNHSREITQSARNALGMLADGGVPL 264

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL GIND P I+  L+   V+ R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               SG C P Y++D PGG GK+ +  + +         + ++  ++  Y    S
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379


>gi|15614818|ref|NP_243121.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125]
 gi|10174874|dbj|BAB05974.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125]
          Length = 468

 Score =  493 bits (1269), Expect = e-137,   Method: Composition-based stats.
 Identities = 122/350 (34%), Positives = 201/350 (57%), Gaps = 3/350 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +E+ + ++  +    + +TP  A+L+NP +P  PI  Q 
Sbjct: 30  WQLTH-TIRTIDDLKQVINLTEEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 88

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E+     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 89  VPISKEIEKTKYDMEDPLAEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 147

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+ YI +   + +V+ +GGD L+++ + L+ +LK LR I HV+I+R 
Sbjct: 148 QIGMGVPKKQMDAAIDYIAQTPAVRDVLLSGGDGLLINDQILEYILKNLRAIPHVEIIRI 207

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   LK+   PV++  H N   E ++EA  A  +L +AG+ + +Q
Sbjct: 208 GTRAPVVFPQRITDHLCSILKKY-HPVWLNTHFNTSLEITKEAKEACEKLVDAGVPVGNQ 266

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V +R++PYY++  DL+ G SHFR  I +G +I+ +L+  
Sbjct: 267 AVILAGINDSTHIMKKLMHDLVAIRVRPYYVYQCDLSEGISHFRAPISKGIEIMEALRGH 326

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SG   P +++D PGG GKV +  + I         + +   ++  YP  
Sbjct: 327 TSGYAVPTFVVDAPGGGGKVTLQPNYILSQSPSKTVLRNFEGVISTYPEP 376


>gi|145220171|ref|YP_001130880.1| L-lysine 2,3-aminomutase [Prosthecochloris vibrioformis DSM 265]
 gi|145206335|gb|ABP37378.1| L-lysine 2,3-aminomutase [Chlorobium phaeovibrioides DSM 265]
          Length = 441

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 128/355 (36%), Positives = 207/355 (58%), Gaps = 6/355 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+R+  + L + + L     +  EQ +   + +  + +++TP   +LIN  +  NDP+ 
Sbjct: 28  WQMRNSIRDLKTYESLLGI-KLSHEQREAFTQTAAKFPMSITPYYLSLINTADMENDPVF 86

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q +P   EL+ILP +  DP+ ++  SP   + HRYPDR+LL + + CP+YCR C R+  
Sbjct: 87  LQSVPSPRELHILPGDMADPLHEDRDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG Q  T+ S     A + YI++  ++ +V+ +GGDP +LS + L  +L  LR I HV+I
Sbjct: 147 VGDQ-DTIPSRAAISAGIEYIRQTPRVRDVLLSGGDPFLLSDEYLDWILTELRAIPHVEI 205

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V PQRI PEL+  LK+  +PV++  H NHP E ++ +  A++ LA+ G+ L
Sbjct: 206 IRIGTRTPVVLPQRITPELVAMLKKH-QPVWVNTHFNHPRELTQSSKNALAMLADGGLPL 264

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL GIND P I+  L+   V  R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               SG   P Y++D PGG GK+ +  + +         + ++  ++  Y    S
Sbjct: 325 IGHTSGFSVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379


>gi|308173939|ref|YP_003920644.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7]
 gi|307606803|emb|CBI43174.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7]
          Length = 473

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 123/352 (34%), Positives = 205/352 (58%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+ +  DL     + +E+ + ++       + +TP  A+L++P NP  PI  Q 
Sbjct: 31  WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +AA+AYI+E  +I + + +GGD L+++ + L+ +LK LR I H++I+R 
Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R PIV PQRI   L Q LK+   PV++  H N   E +EE++ A  +L NAG+ + +Q
Sbjct: 209 GTRAPIVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            +G   P +++D PGG GK+ +  + +         I +   ++  YP   +
Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYPEPEN 379


>gi|30020383|ref|NP_832014.1| lysine 2,3-aminomutase [Bacillus cereus ATCC 14579]
 gi|206971483|ref|ZP_03232433.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134]
 gi|218232653|ref|YP_002366998.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264]
 gi|228958567|ref|ZP_04120287.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|229044042|ref|ZP_04191731.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676]
 gi|229069827|ref|ZP_04203109.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185]
 gi|229079468|ref|ZP_04212008.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2]
 gi|229109738|ref|ZP_04239324.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15]
 gi|229127695|ref|ZP_04256684.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4]
 gi|229144892|ref|ZP_04273289.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24]
 gi|229150521|ref|ZP_04278737.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550]
 gi|229178666|ref|ZP_04306030.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W]
 gi|229190380|ref|ZP_04317381.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876]
 gi|296502862|ref|YP_003664562.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171]
 gi|29895934|gb|AAP09215.1| Lysine 2,3-aminomutase [Bacillus cereus ATCC 14579]
 gi|206733468|gb|EDZ50640.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134]
 gi|218160610|gb|ACK60602.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264]
 gi|228593164|gb|EEK50982.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876]
 gi|228604824|gb|EEK62281.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W]
 gi|228633014|gb|EEK89627.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550]
 gi|228638614|gb|EEK95047.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24]
 gi|228655772|gb|EEL11621.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4]
 gi|228673779|gb|EEL29037.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15]
 gi|228703838|gb|EEL56284.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2]
 gi|228713230|gb|EEL65123.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185]
 gi|228725323|gb|EEL76591.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676]
 gi|228801194|gb|EEM48091.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|296323914|gb|ADH06842.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171]
          Length = 473

 Score =  492 bits (1268), Expect = e-137,   Method: Composition-based stats.
 Identities = 126/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|47565659|ref|ZP_00236699.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241]
 gi|47557295|gb|EAL15623.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241]
          Length = 473

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 125/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  ++ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|42781397|ref|NP_978644.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987]
 gi|42737319|gb|AAS41252.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987]
          Length = 473

 Score =  492 bits (1267), Expect = e-137,   Method: Composition-based stats.
 Identities = 125/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  ++ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|150020100|ref|YP_001305454.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
           melanesiensis BI429]
 gi|149792621|gb|ABR30069.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
           melanesiensis BI429]
          Length = 423

 Score =  491 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 131/347 (37%), Positives = 209/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ +T+   L     + KE+ + I++      +A+TP  A+L++P NP  PI RQ 
Sbjct: 23  WQIRNR-ITNVDTLKKVINLTKEEEEGIRQSLKTLRMAITPYYASLMDPDNPKCPIRRQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +EL + P +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   G 
Sbjct: 82  VPTVKELEVKPWDMIDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q     +  + +AA+ YI+E  Q+ +V+ +GGD L+     L+ +LK LR IKHV+I+R 
Sbjct: 141 QHDRTRTKSEIDAAIDYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQ +  EL   LK+   P++I +  NHP E + E+  A   LA+AGI L +Q
Sbjct: 201 GTRAPVVIPQIVTKELTNMLKKY-HPIWINMQFNHPKEITSESSKACEMLADAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND P I+  L+   V++R++PYY++  DL+ G SHFR +I  G KI+ SL   
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGISHFRTSIGTGLKIMESLIGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P Y++D P G GK+++    +    N +  + ++  ++  Y
Sbjct: 320 TSGFCVPTYVVDAPAGGGKIRLMPQYLISYSNNTAILRNYEGVIVAY 366


>gi|30262308|ref|NP_844685.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames]
 gi|47527599|ref|YP_018948.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49185154|ref|YP_028406.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne]
 gi|49479498|ref|YP_036410.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|52143159|ref|YP_083670.1| lysine 2,3-aminomutase [Bacillus cereus E33L]
 gi|65319605|ref|ZP_00392564.1| COG1509: Lysine 2,3-aminomutase [Bacillus anthracis str. A2012]
 gi|118477725|ref|YP_894876.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam]
 gi|165870485|ref|ZP_02215139.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488]
 gi|167632881|ref|ZP_02391207.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442]
 gi|167639704|ref|ZP_02397974.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193]
 gi|170686947|ref|ZP_02878166.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465]
 gi|170706603|ref|ZP_02897062.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389]
 gi|177649254|ref|ZP_02932256.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174]
 gi|190565714|ref|ZP_03018634.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I]
 gi|196033856|ref|ZP_03101267.1| L-lysine 2,3-aminomutase [Bacillus cereus W]
 gi|196040024|ref|ZP_03107327.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99]
 gi|196043261|ref|ZP_03110499.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108]
 gi|206974107|ref|ZP_03235025.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97]
 gi|217959809|ref|YP_002338361.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187]
 gi|218903441|ref|YP_002451275.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820]
 gi|222095894|ref|YP_002529951.1| lysine 2,3-aminomutase [Bacillus cereus Q1]
 gi|225864277|ref|YP_002749655.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102]
 gi|227814883|ref|YP_002814892.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684]
 gi|228914904|ref|ZP_04078509.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|228927370|ref|ZP_04090427.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228933607|ref|ZP_04096457.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228945921|ref|ZP_04108264.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228985395|ref|ZP_04145554.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229091290|ref|ZP_04222508.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42]
 gi|229121855|ref|ZP_04251075.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201]
 gi|229139003|ref|ZP_04267580.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26]
 gi|229155888|ref|ZP_04283989.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342]
 gi|229184527|ref|ZP_04311730.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1]
 gi|229196526|ref|ZP_04323270.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293]
 gi|229601618|ref|YP_002866645.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248]
 gi|254684881|ref|ZP_05148741.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CNEVA-9066]
 gi|254722289|ref|ZP_05184077.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A1055]
 gi|254737328|ref|ZP_05195032.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Western North
           America USA6153]
 gi|254743487|ref|ZP_05201172.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Kruger B]
 gi|254751644|ref|ZP_05203681.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Vollum]
 gi|254760163|ref|ZP_05212187.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Australia 94]
 gi|301053835|ref|YP_003792046.1| lysine 2,3-aminomutase [Bacillus anthracis CI]
 gi|30256939|gb|AAP26171.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames]
 gi|47502747|gb|AAT31423.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor']
 gi|49179081|gb|AAT54457.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne]
 gi|49331054|gb|AAT61700.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian
           str. 97-27]
 gi|51976628|gb|AAU18178.1| lysine 2,3-aminomutase [Bacillus cereus E33L]
 gi|118416950|gb|ABK85369.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam]
 gi|164713640|gb|EDR19163.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488]
 gi|167512413|gb|EDR87789.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193]
 gi|167531693|gb|EDR94358.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442]
 gi|170128334|gb|EDS97202.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389]
 gi|170668998|gb|EDT19742.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465]
 gi|172084328|gb|EDT69386.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174]
 gi|190563741|gb|EDV17706.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I]
 gi|195993536|gb|EDX57493.1| L-lysine 2,3-aminomutase [Bacillus cereus W]
 gi|196025570|gb|EDX64239.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108]
 gi|196029283|gb|EDX67887.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99]
 gi|206748263|gb|EDZ59652.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97]
 gi|217065467|gb|ACJ79717.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187]
 gi|218537953|gb|ACK90351.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820]
 gi|221239952|gb|ACM12662.1| lysine 2,3-aminomutase [Bacillus cereus Q1]
 gi|225789207|gb|ACO29424.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102]
 gi|227005066|gb|ACP14809.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684]
 gi|228586882|gb|EEK44956.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293]
 gi|228598938|gb|EEK56555.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1]
 gi|228627495|gb|EEK84221.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342]
 gi|228644358|gb|EEL00613.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26]
 gi|228661644|gb|EEL17264.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201]
 gi|228692056|gb|EEL45797.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42]
 gi|228774348|gb|EEM22755.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228813795|gb|EEM60073.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228826067|gb|EEM71850.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228832266|gb|EEM77846.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228844700|gb|EEM89746.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis
           BGSC 4CC1]
 gi|229266026|gb|ACQ47663.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248]
 gi|300376004|gb|ADK04908.1| lysine 2,3-aminomutase [Bacillus cereus biovar anthracis str. CI]
 gi|324326330|gb|ADY21590.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 473

 Score =  491 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 125/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  ++ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|218897268|ref|YP_002445679.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842]
 gi|228900889|ref|ZP_04065104.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222]
 gi|228908066|ref|ZP_04071914.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200]
 gi|228939455|ref|ZP_04102043.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228972309|ref|ZP_04132920.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228978923|ref|ZP_04139289.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407]
 gi|218545608|gb|ACK98002.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842]
 gi|228780797|gb|EEM29009.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407]
 gi|228787326|gb|EEM35294.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228820155|gb|EEM66192.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228851484|gb|EEM96290.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200]
 gi|228858815|gb|EEN03260.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222]
 gi|326940003|gb|AEA15899.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar chinensis
           CT-43]
          Length = 473

 Score =  491 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 126/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|229161268|ref|ZP_04289255.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803]
 gi|228622364|gb|EEK79203.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803]
          Length = 473

 Score =  491 bits (1266), Expect = e-137,   Method: Composition-based stats.
 Identities = 124/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+ YI++  Q+ +V+ +GGD L+++ K L+ VLK+LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKSLREIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|229074953|ref|ZP_04207960.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18]
 gi|229096796|ref|ZP_04227766.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29]
 gi|229102897|ref|ZP_04233591.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28]
 gi|229115778|ref|ZP_04245180.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3]
 gi|228667661|gb|EEL23101.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3]
 gi|228680570|gb|EEL34753.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28]
 gi|228686638|gb|EEL40546.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29]
 gi|228708181|gb|EEL60347.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18]
          Length = 473

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 126/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|157363352|ref|YP_001470119.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae
           TMO]
 gi|157313956|gb|ABV33055.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae
           TMO]
          Length = 419

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 132/347 (38%), Positives = 213/347 (61%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLR++ + +   L     +  ++ + ++       +A+TP  A L++P NP  PI  Q 
Sbjct: 23  WQLRNRIM-NLDVLQEVVNLTDQEREGVRHSLKFLRMAITPYYATLMDPENPRCPIRMQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +ELNI  EE  DP+ ++  SP+KG+ HRYPDR+LL +   C +YCR C RR   G 
Sbjct: 82  IPTAKELNISQEEMIDPLHEDVDSPVKGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  + LS +   +A+ YI++  +I +V+ +GGDPL LS ++L+ ++  +R I+HV+I+R 
Sbjct: 141 ETDSPLSDELLNSAIDYIKQNKRIRDVLLSGGDPLTLSTEKLENIISRIREIEHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+V P RI  EL   LK+   P+++  H NHP E + ++  A+S LA+AGI L +Q
Sbjct: 201 GTRVPVVLPMRITEELTSMLKKY-HPIWLNTHFNHPKEITPQSRRALSMLADAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND P+I+  L+   V+ R++PYY++  DL+ G SHFR T+ +G +I+  L+  
Sbjct: 260 SVLLRGINDCPQIMKKLVHELVKNRVRPYYIYQCDLSRGLSHFRTTVAKGIEIIEYLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P Y++D PGG GK+ ++   +  +G G   + ++   +  Y
Sbjct: 320 TSGFAVPTYVIDAPGGGGKIPVEPQYLISMGEGKVVLRNYEGGIFVY 366


>gi|228921012|ref|ZP_04084347.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228838558|gb|EEM83864.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 473

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 125/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+ YI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAITYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|21227036|ref|NP_632958.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1]
 gi|20905357|gb|AAM30630.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1]
          Length = 419

 Score =  491 bits (1265), Expect = e-137,   Method: Composition-based stats.
 Identities = 122/353 (34%), Positives = 203/353 (57%), Gaps = 5/353 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q R++ +T+ ++L    L+   +  +IK+    + +A++P  A+LI+P +P  P+  Q 
Sbjct: 21  WQYRNR-ITTVEELEKLILLSDTEKRDIKKALEVFPMAISPYYASLIDPDDPECPVRLQA 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           +PQ  EL     E EDP+ ++  SP +   I HRYPDR+L  + + C +YCR C R+  V
Sbjct: 80  VPQSAELQKSSWELEDPLCEDQDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 139

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G  +    S K     + YI+   ++ +V+ +GGD L++S +RL  +L  L  I HV+I+
Sbjct: 140 G-NREHDYSEKAIREGIEYIRMHHEVRDVLLSGGDALLVSDERLDWLLGELFSIPHVEIV 198

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  +R P+  PQRI PEL + L +    V++  H NHP E + EA  A++ LA AGI L 
Sbjct: 199 RLGTRAPVTLPQRITPELCEILGKYP-SVWLNTHFNHPKEITPEAKKAMNMLACAGIPLG 257

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +QSVLL+ +ND P I+ NL    ++++ +PYYL+  DL+ G  HFR ++  G +I+  L+
Sbjct: 258 NQSVLLRRVNDCPVIIKNLCHELLKIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEMLR 317

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
              SGL  P +++D PGG GK+ +  + +    +    + ++  ++  YP  +
Sbjct: 318 GHTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICVYPEPA 370


>gi|282164589|ref|YP_003356974.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE]
 gi|282156903|dbj|BAI61991.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE]
          Length = 435

 Score =  491 bits (1264), Expect = e-137,   Method: Composition-based stats.
 Identities = 120/350 (34%), Positives = 201/350 (57%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+RH  + + S ++L   +   +E+  E+++   H+ + +TP   +LI+  +  NDP+ 
Sbjct: 29  WQMRHAVRDIPSFEELTGVHF-NREERRELEKTIEHFPLNITPYYLSLIDTADMKNDPVY 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q  P  EELN+   +  DP+ +   SP+ GI HRYPDR+L  + +VC +YCR C R+  
Sbjct: 88  KQCFPSPEELNVEKCDMVDPLAEEEDSPVPGITHRYPDRVLFLVSNVCAMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG     +   +     + YI++   I +V+ +GGDPL+L    L  +L  L  I HV++
Sbjct: 148 VG-NVDYIPDRETILKGIDYIRDNPSIRDVLLSGGDPLMLPDDYLDWILSELDNIPHVEV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +RVP+V P RI  +L++ LK    P++I  H NHP E +  +  A+ +LA+AGI L
Sbjct: 207 VRIGTRVPVVLPCRITDDLVEMLKGH-HPLWINTHFNHPKEVTPASREALRKLADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q VLL G+ND P+I+  L +  V+ R++PYY+   DL+ G SHFR ++ +G +I+ +L
Sbjct: 266 GNQCVLLAGVNDCPQIMKKLFQKLVQNRVRPYYMFQCDLSEGLSHFRTSVSKGIEIIENL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D PGG GK+ +  + +         + ++  ++  Y
Sbjct: 326 VGHTSGFAVPTYVVDAPGGGGKIPVMPNYLISSATNKVVMRNYEGVITTY 375


>gi|193213047|ref|YP_001999000.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum
           NCIB 8327]
 gi|193086524|gb|ACF11800.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum
           NCIB 8327]
          Length = 440

 Score =  491 bits (1264), Expect = e-137,   Method: Composition-based stats.
 Identities = 129/355 (36%), Positives = 205/355 (57%), Gaps = 6/355 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+RH  + L + + L +   +  EQ     E    + ++ TP   +LIN  +  NDP+ 
Sbjct: 28  WQMRHSIRDLDTFERLLDI-TLSDEQRKAFGETVQKFPMSTTPYYLSLINTDDMENDPVF 86

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q +P   EL I+  +  DP+ ++  SP   + HRYPDR+LL + + CP+YCR C R+  
Sbjct: 87  LQSVPSPLELKIMKGDMADPLHEDEDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG +  T+ +    +A + YI+   Q+ +V+ +GGDP +LS + L  +L  LR I+HV+I
Sbjct: 147 VGDE-DTIPNRAAIQAGIDYIRNTPQVRDVLLSGGDPFLLSDEMLDWILTELRAIEHVEI 205

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V PQRI PEL+  L +  +PV++  H NHP E ++ A  A++RLA+ G+ L
Sbjct: 206 IRVGTRTPVVLPQRITPELVAILGKH-QPVWVNTHFNHPREMTQSARNALARLADVGVPL 264

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL GIND P I+  L+   V  R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               SG C P Y++D PGG GK+ +  + +         + ++  ++  Y    S
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379


>gi|253582165|ref|ZP_04859388.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium
           ATCC 27725]
 gi|251835704|gb|EES64242.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium
           ATCC 27725]
          Length = 382

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 114/334 (34%), Positives = 194/334 (58%), Gaps = 2/334 (0%)

Query: 14  LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
           L     +  E+ + +K+      +A+TP   +L++ ++PN P+ +Q IP  +E++    +
Sbjct: 3   LKKYITLSAEEEEGVKKTLETLRMAITPYYFSLMDINDPNCPVRKQAIPSIKEIHKAEAD 62

Query: 74  REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
             DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   G+     +     + 
Sbjct: 63  LLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGANDD-AMPMDRIDK 121

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
           A+ YI +  Q+ +V+ +GGD L++S + L+ ++  LR I HV+I+R  SR P+V PQRI 
Sbjct: 122 AIEYIAKTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRIGSRTPVVLPQRIT 181

Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
           PEL++ LK+   P+++  H NHP E + E+  A   +ANAGI L +QSVLL+GIND   +
Sbjct: 182 PELVEMLKKY-HPIWLNTHFNHPKEVTPESKKACELMANAGIPLGNQSVLLRGINDCVHV 240

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
           +  L+   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   P +++D 
Sbjct: 241 MKRLVHDLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDA 300

Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           PGG GK  +    +         + +   ++  Y
Sbjct: 301 PGGGGKTPVMPQYVISQAPHKVVLRNFEGVITTY 334


>gi|228952639|ref|ZP_04114715.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228807105|gb|EEM53648.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
          Length = 473

 Score =  490 bits (1263), Expect = e-136,   Method: Composition-based stats.
 Identities = 125/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI+E  Q+ +V+ +GGD L+++ K L+ VLK LR + HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREVPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|217076542|ref|YP_002334258.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B]
 gi|217036395|gb|ACJ74917.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B]
          Length = 423

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 130/347 (37%), Positives = 207/347 (59%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ +T    L     +  E+ + I+       +A+TP  A+L++P NP  PI RQ 
Sbjct: 23  WQIRNR-ITDVDTLKQVINLTPEEENGIRNSLKTLRMAITPYYASLMDPDNPKCPIRRQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +EL + P +  DP+ ++  SP+ G+ HRYPDR+LL +  +C +YCR C RR   G 
Sbjct: 82  VPTIKELEVKPWDMVDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q     + ++ +AA+ YI+E  Q+ +V+ +GGD L+     L+ +LK LR IKHV+I+R 
Sbjct: 141 QHDRARTKQEIDAAIEYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQ +  EL   LK+   P+++  H NHP E + E+  A   LA+AGI L +Q
Sbjct: 201 GSRAPVVIPQIVTKELTDMLKKY-HPIWLNTHFNHPKEITPESSRACEMLADAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND P I+  L+   V++R++PYYL+  DL+ G SHFR +I  G +I+ SL   
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYLYQCDLSQGISHFRTSIGTGLRIIESLIGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P Y++D P G GK+++    +    + +  + ++  ++  Y
Sbjct: 320 TSGFCVPTYVVDAPAGGGKIRLMPEYLISYSDKTAILRNYEGVIVAY 366


>gi|28210601|ref|NP_781545.1| L-lysine 2,3-aminomutase [Clostridium tetani E88]
 gi|28203039|gb|AAO35482.1| L-lysine 2,3-aminomutase [Clostridium tetani E88]
          Length = 424

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 198/347 (57%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ +T+   L     +  E+ + I +      + ++P  A LI+P +PNDP+ +Q 
Sbjct: 23  WQVKNR-ITTIDQLKKIINLLPEEEEAIDKCLKTLRMGISPYYATLIHPDDPNDPVRKQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL+    +  DP+ ++  SP+ G+ H YPDR+LL +  +C +YCR C RR   G 
Sbjct: 82  VPTLHELSFSEADMFDPLHEDASSPVPGLTHAYPDRVLLLVTDMCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +     + AL YI+    + +V+ +GGD  ++S + +  +LK LR I HV+I+RF
Sbjct: 141 HTDNSMPQNRIDMALDYIRNTPTVRDVLLSGGDGFMISDENIDYILKNLREIPHVEIIRF 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V+P RI   L+  LK+   P+++  H NHP E +E +I A  +LANAGI + +Q
Sbjct: 201 GTRTPVVNPMRITDNLVNILKKY-HPIWVNTHFNHPNEITEYSIKACEKLANAGIPIGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GIND   I  +L+   V++R++PYYL+  DL+ G  HFR  + +G +I+  L+  
Sbjct: 260 TVLLRGINDCVYIQKDLVHKLVKMRVRPYYLYQCDLSQGIEHFRTKVSKGIEIIEGLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK+ +    +         + ++  ++  Y
Sbjct: 320 TSGFAVPTFVVDAPGGGGKIPVMPQYLISQSPTKVVLRNYEGVITTY 366


>gi|291286787|ref|YP_003503603.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290883947|gb|ADD67647.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 438

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 118/355 (33%), Positives = 204/355 (57%), Gaps = 6/355 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
            Q RH T+ + +D  +   I    E+  E+K     + +A+TP  A+LI+  N  +DP+ 
Sbjct: 29  WQFRH-TIKTVEDFEDVLNISFSPEEKKEMKITLRKFPMAITPYYASLIDIENYKDDPVF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q     EEL++   E  DP+ +++ SP++ + HRYPDR+L  + ++C +YCR C R+  
Sbjct: 88  KQSCCSTEELHVESYEMGDPLAEDSDSPVENLTHRYPDRVLFHVSNMCAMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG Q   + +       L YI+E  ++ +V+ +GGDP +LS   ++ +L  +  I+HV++
Sbjct: 148 VGDQ-DHIPAKDSLIKGLEYIREHEEVRDVLLSGGDPFMLSDSAIEWLLDEISSIEHVEV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R+P+V P RI  +LI  L +    ++I  H NHP E ++ +  A+ +L  AGI +
Sbjct: 207 IRIGTRMPVVLPYRITEDLIDILSKYD-NLWINTHFNHPRELTDSSRQALKKLVKAGIPM 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND P I+ +LM   V+ R++PYY++  DL+ G SHFR  + +G +I+ SL
Sbjct: 266 GNQTVLLAGVNDCPYIMKSLMHKLVKNRVRPYYIYQCDLSEGLSHFRTPVSKGIEIIESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           +   SG   P Y++D PGG GK+ +  + +         + ++  ++  Y    S
Sbjct: 326 RGHTSGFAVPTYVIDAPGGGGKIPVTPNYVVSYATNKVILRNYEGVICTYKEPDS 380


>gi|182413733|ref|YP_001818799.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1]
 gi|177840947|gb|ACB75199.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1]
          Length = 403

 Score =  490 bits (1262), Expect = e-136,   Method: Composition-based stats.
 Identities = 132/352 (37%), Positives = 214/352 (60%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ LTS  +L     +  E+       ++  S+A+TP   NLI+  +PN PI +Q 
Sbjct: 30  WQLKNR-LTSVAELERYMTLTPEEKAGCLFANHKLSLAITPYFFNLIDREDPNCPIRKQV 88

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+  E+ +  EE+ D +G++ HSP+ G+VHRYPDR+L  +   C  YCR+C R  +V +
Sbjct: 89  IPRAGEMQVSAEEQLDSLGEDAHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +       + E  L YI+   ++ +V+ +GGDPL+LS ++L+ ++  LR I HV+ +R 
Sbjct: 149 AQDYNFHP-EYEQGLRYIEAHPEVRDVLLSGGDPLLLSDRKLEHLISRLRAIPHVEFIRI 207

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR+P+  PQRI PEL +  K+ G P++++IH NHP E + E   A  RL+ AG+ L +Q
Sbjct: 208 GSRIPVFLPQRITPELCEVFKKHG-PIWMSIHVNHPKEATAELKQACDRLSFAGVPLGNQ 266

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKG+NDD E++  L+   + +R++PYYL+  DL  G SHF++ + +G +I+ +L+  
Sbjct: 267 SVLLKGVNDDAEVMKALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRKGIEIIQALRGH 326

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            +G   P Y++D PGG GKV I+   ++K+ +      +       YP KS+
Sbjct: 327 TTGYAIPQYVIDAPGGGGKVPINPDYLEKITDEEVVFRNFEGRRFTYPLKST 378


>gi|258404824|ref|YP_003197566.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium
           retbaense DSM 5692]
 gi|257797051|gb|ACV67988.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium
           retbaense DSM 5692]
          Length = 440

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 122/350 (34%), Positives = 203/350 (58%), Gaps = 6/350 (1%)

Query: 1   MQLRHKT--LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
            QLRH    L + + L +      E+  +  +    + +++TP   +LI+  +  NDP+ 
Sbjct: 29  WQLRHSISDLATVEKLLDIEF-DPEKRKQYAKTMEIFPMSVTPYYLSLIDTEDYENDPVF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q IP  +EL+I   + +DP+ ++  SP  GI HRYPDR+L  + + C +YCR C R+  
Sbjct: 88  KQAIPLPDELDIAVHDMKDPLSEDEDSPAPGITHRYPDRVLFHVSNTCSMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG     V    D +A L YI+   Q+ +V+ +GGDP +L   ++  +L  LR I+HV++
Sbjct: 148 VGDS-DFVPCRDDLQAGLDYIRNTPQVRDVLLSGGDPFMLPDHQIDWLLGQLRSIEHVEV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR+P+V P RI   L+  LK+   P+++  H NHP E ++ +  A+++LA+AGI L
Sbjct: 207 IRIGSRMPVVLPYRITDNLVSILKKH-HPLWLNTHFNHPRELTQSSRKALAKLADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND P ++  L+   V+ R++PYYL+  DL+ G +HFR  + +G +I+ SL
Sbjct: 266 GNQTVLLAGVNDCPRLMKTLIHKLVQNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D PGG GK+ +  + I   G     + ++  ++  Y
Sbjct: 326 IGHTSGFAVPTYVIDAPGGGGKIPVMPNYIVSWGTNKVILRNYEGVITTY 375


>gi|228965278|ref|ZP_04126372.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228794512|gb|EEM42024.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 451

 Score =  490 bits (1261), Expect = e-136,   Method: Composition-based stats.
 Identities = 126/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|229172992|ref|ZP_04300544.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3]
 gi|228610512|gb|EEK67782.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3]
          Length = 473

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLKKVINLIPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+ YI++  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|160902541|ref|YP_001568122.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95]
 gi|160360185|gb|ABX31799.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95]
          Length = 436

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 201/347 (57%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLR++ +T  + L     +  E+   IK       +A+TP  A L++P NP  PI RQ 
Sbjct: 26  WQLRNR-ITDVEKLRQIINLTPEEEQGIKNTLKTLRMAITPYFATLMDPDNPKCPIRRQA 84

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +EL   P ++ DP+ ++  SP  G+ HRYPDR+L  +  +C +YCR C RR   G 
Sbjct: 85  VPSSKELIKGPWDQIDPLHEDADSPAPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 143

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q  +     + +A+L YI++  Q+ +V+ +GGD L+     L+ +L  L+ I HV+++R 
Sbjct: 144 QTDSNRKRNEIDASLQYIRDTPQVRDVLLSGGDALMAGIPILEYILSELKKIPHVEVVRI 203

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+V PQ I   L+  LK+   P+++    NHP E + E+  A  +LA+AGI L +Q
Sbjct: 204 GTRVPVVFPQLITDNLVNVLKKY-HPLWLNTQFNHPKEITPESAEACRKLADAGIPLGNQ 262

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND   I+  L+   V++R++PYYL+  DL+ G  HFR ++ +G +I+ SL   
Sbjct: 263 SVLLRGVNDSKYIIMELVHELVKIRVRPYYLYQCDLSQGIEHFRTSVSKGIEIMESLIGH 322

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK++I  + +      +  + ++  ++  Y
Sbjct: 323 TSGFAIPEFVVDAPGGGGKIRIMPNYLISQNKDTVILRNYEGVISTY 369


>gi|294101198|ref|YP_003553056.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium
           colombiense DSM 12261]
 gi|293616178|gb|ADE56332.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium
           colombiense DSM 12261]
          Length = 433

 Score =  489 bits (1259), Expect = e-136,   Method: Composition-based stats.
 Identities = 130/347 (37%), Positives = 206/347 (59%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ +T A+ L     + K ++  IK   N   +A+TP  A+LIN ++P+ PI +Q 
Sbjct: 28  WQMANR-ITEAKHLEQVVDLTKSELAMIKRSLNVLRMAITPYFASLINRNDPSCPIRKQC 86

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E  I+  ++ DP+ +   SP+ G+ HRYPDR LL +   C +YCR C RR   G 
Sbjct: 87  IPTLQETLIVQSDQLDPLHEEVDSPVPGLTHRYPDRCLLLVTDQCSMYCRHCTRRRFAG- 145

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q     S K+ EA + YI++   I +V+ +GGDPL LS  R++ +L+ +R I HV+I+R 
Sbjct: 146 QTDLPRSEKEIEACIDYIRKTPVIRDVLISGGDPLTLSDDRIEGILREIRAIPHVEIIRI 205

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+V P RI   L   LK+   P+++ +  NHP E + E+  A  +LANAGI L +Q
Sbjct: 206 GTRVPVVMPMRITDNLCSMLKKY-HPLWMNLQFNHPREITPESADACQKLANAGIPLGNQ 264

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKGIND P I   L +  +++R++PYY++  DL+ G  HFR +I +G +I+  L+  
Sbjct: 265 SVLLKGINDCPYIFRELNQQLLKIRVRPYYIYQCDLSQGIEHFRTSIGKGVEIMEFLRGH 324

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P +++D PGG GK+ +  + +    +    + +   ++  Y
Sbjct: 325 TSGLAVPTFVVDAPGGGGKIPVMPNYVVSRSDRKTVLRNFEGVLTVY 371


>gi|95930512|ref|ZP_01313247.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
 gi|95133347|gb|EAT15011.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
          Length = 437

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 128/355 (36%), Positives = 206/355 (58%), Gaps = 6/355 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+  K + S  D      I+   E   +I++  + + +++TP   +LIN  +  NDP+ 
Sbjct: 30  WQM-SKCIKSVDDFEQLLGIEFEPEYRKKIEQTVDTFPLSITPYYLSLINTDDYANDPVF 88

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ  P  EEL +L  +  DP+ ++  SP  GI HRYPDR+L  + ++C +YCR C R+  
Sbjct: 89  RQAFPVPEELQVLDHDMADPLAEDQDSPAPGITHRYPDRVLFHISNICSMYCRHCTRKRK 148

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG Q  TV   ++ EA L YI+    + +V+ +GGDPL+LS   L  +L  L  I+HVQ+
Sbjct: 149 VGDQ-DTVPGREEIEAGLEYIRNNPVVRDVLLSGGDPLMLSDDHLDWILTELDQIEHVQV 207

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R+P+V P RI  +L+  LK+   P+++  H NHP E +  +  A+ +LA+AGI L
Sbjct: 208 VRLGTRMPVVLPYRITDDLVAVLKKH-HPIWVNTHFNHPREMTTSSKEAVRKLADAGIPL 266

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P I+  L+   V  R++PYYL+  DL+ G +HFR  + +G +I+ SL
Sbjct: 267 GNQSVLLAGVNDCPRIMKALVHKLVANRVRPYYLYQCDLSEGLNHFRTPVGKGIEIMESL 326

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           +   SG   P Y++D PGG GK+ ++ + +  +      + ++  ++  Y    S
Sbjct: 327 RGHTSGFSVPTYVVDAPGGGGKIPLNPNYLVSLSTNKVVLRNYEGVITTYKEPDS 381


>gi|288556721|ref|YP_003428656.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4]
 gi|288547881|gb|ADC51764.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4]
          Length = 478

 Score =  488 bits (1258), Expect = e-136,   Method: Composition-based stats.
 Identities = 115/352 (32%), Positives = 197/352 (55%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + ++  +    + +TP  A+L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIRTLDDLKQVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE+     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPIGEEIYKTKYDMEDPLEEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+ YI+   ++ +V+ +GGD L+++   L+ +LK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDGAIDYIKNTPEVRDVLISGGDGLLINDTILEYILKNLRAIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   LK+   PV++  H N   E +EE+  A   L N+G+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKNACEMLVNSGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  L +  V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLCQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D P G GK+ +  + +         + +   ++  YP   +
Sbjct: 328 TSGYSVPTFVVDAPHGGGKITLQPNYMISQSPDKVVLRNFEGVITTYPEPEN 379


>gi|194333635|ref|YP_002015495.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris
           aestuarii DSM 271]
 gi|194311453|gb|ACF45848.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris
           aestuarii DSM 271]
          Length = 437

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 128/355 (36%), Positives = 205/355 (57%), Gaps = 6/355 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+R+  + L + + L N   +  +Q +   E    + +++TP   +LIN  +  NDP+ 
Sbjct: 28  WQMRNSIRDLDTFETLLNI-TLSPDQRNVFNETVKKFPMSITPYYLSLINTSDMENDPVF 86

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ +P   EL+I+  +  DP+ ++  SP   + HRYPDR+LL + + CP+YCR C R+  
Sbjct: 87  RQSVPSHHELDIMKGDMADPLHEDQDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG Q  T+ +       + YI+    I +V+ +GGDP +L    L  +L+ LR I+HV+I
Sbjct: 147 VGDQ-DTIPTKTSISKGIDYIRSNPAIRDVLLSGGDPFLLPDDYLDWILEELRKIEHVEI 205

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V P RI PEL+Q L++  +PV++  H NH  E ++ A  A+S LA+ GI L
Sbjct: 206 IRIGTRTPVVLPYRITPELVQILRKH-QPVWVNTHFNHSREMTQSARNALSMLADGGIPL 264

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL GIND P I+  L+   V+ R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHQLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               SG C P Y++D PGG GK+ +  + +         + ++  ++  Y    S
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379


>gi|169828773|ref|YP_001698931.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41]
 gi|168993261|gb|ACA40801.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41]
          Length = 462

 Score =  488 bits (1257), Expect = e-136,   Method: Composition-based stats.
 Identities = 123/349 (35%), Positives = 200/349 (57%), Gaps = 3/349 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     + +E+ + +K       + +TP  A+L+NP +   PI  Q 
Sbjct: 32  WQLTN-TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQS 90

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E+     + EDP+ ++  SP+ GI HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 91  VPLSAEIMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 149

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+ YI+   +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R 
Sbjct: 150 QVGMAVPKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRI 209

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  EL   LK+   PV++  H N   E ++EA  A  +L NAG+ + +Q
Sbjct: 210 GTRAPVVFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQ 268

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SV+L GIND   I+  L+   V++R++PYY++  DL+ G SHFR  I +G +I+ SL+  
Sbjct: 269 SVILTGINDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGH 328

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
            SG   P +++D P G GK+ +  + I         + ++  ++  YP 
Sbjct: 329 TSGYAVPTFVVDAPNGGGKIALQPNYIISQSPEKVVLRNYEGVISSYPE 377


>gi|126652300|ref|ZP_01724476.1| KamA [Bacillus sp. B14905]
 gi|126590875|gb|EAZ84988.1| KamA [Bacillus sp. B14905]
          Length = 462

 Score =  488 bits (1256), Expect = e-136,   Method: Composition-based stats.
 Identities = 123/349 (35%), Positives = 200/349 (57%), Gaps = 3/349 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     + +E+ + +K       + +TP  A+L+NP +   PI  Q 
Sbjct: 32  WQLTN-TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQS 90

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E+     + EDP+ ++  SP+ GI HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 91  VPLSAEIMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 149

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+ YI+   +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R 
Sbjct: 150 QVGMAVPKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRI 209

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  EL   LK+   PV++  H N   E ++EA  A  +L NAG+ + +Q
Sbjct: 210 GTRAPVVFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQ 268

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SV+L GIND   I+  L+   V++R++PYY++  DL+ G SHFR  I +G +I+ SL+  
Sbjct: 269 SVILTGINDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGH 328

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
            SG   P +++D P G GK+ +  + I         + ++  ++  YP 
Sbjct: 329 TSGYAVPTFVVDAPNGGGKIALQPNYILSQSPEKVVLRNYEGVISSYPE 377


>gi|229017613|ref|ZP_04174507.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273]
 gi|229023830|ref|ZP_04180315.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272]
 gi|228737515|gb|EEL88025.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272]
 gi|228743682|gb|EEL93788.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273]
          Length = 472

 Score =  487 bits (1255), Expect = e-136,   Method: Composition-based stats.
 Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  ++ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379


>gi|163940087|ref|YP_001644971.1| lysine 2,3-aminomutase YodO family protein [Bacillus
           weihenstephanensis KBAB4]
 gi|229011567|ref|ZP_04168753.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048]
 gi|229133129|ref|ZP_04261965.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196]
 gi|229167131|ref|ZP_04294874.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621]
 gi|163862284|gb|ABY43343.1| lysine 2,3-aminomutase YodO family protein [Bacillus
           weihenstephanensis KBAB4]
 gi|228616365|gb|EEK73447.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621]
 gi|228650338|gb|EEL06337.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196]
 gi|228749722|gb|EEL99561.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048]
          Length = 472

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  ++ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379


>gi|229030019|ref|ZP_04186084.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271]
 gi|228731280|gb|EEL82197.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271]
          Length = 478

 Score =  487 bits (1255), Expect = e-135,   Method: Composition-based stats.
 Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLKKVINLIPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+ YI++  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379


>gi|205373143|ref|ZP_03225947.1| lysine 2,3-aminomutase [Bacillus coahuilensis m4-4]
          Length = 468

 Score =  487 bits (1254), Expect = e-135,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 204/350 (58%), Gaps = 3/350 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + +K  +    + +TP  A L+N ++P  PI  Q 
Sbjct: 31  WQLTN-TIRTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNKNDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPLGQEIHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+ YI++   I +V+ +GGD L+++ + L+ ++K+LR I H++I+R 
Sbjct: 149 QIGMGVPKKQIDRAIQYIKDNDGIRDVLLSGGDALLINDQVLEYIIKSLREIPHIEIIRL 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  +L+  LK+   PV++  H N   E ++EA  A  +L NAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITDKLVGILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  I +G +I+  L+  
Sbjct: 268 AVILAGINDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SG   P +++D PGG GK+ +  + +   G+    + +   ++  YP  
Sbjct: 328 TSGYAVPAFVVDAPGGGGKITLQPNYLLAQGSKHVVLRNFEGVITTYPEP 377


>gi|150400676|ref|YP_001324442.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus
           Nankai-3]
 gi|150013379|gb|ABR55830.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus
           Nankai-3]
          Length = 437

 Score =  486 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 123/350 (35%), Positives = 201/350 (57%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            QL++  + + + +++       +++  E++E ++ + +++TP  A+LI+  N   DPI 
Sbjct: 30  WQLKNSIRDIDTFEEVIGIKF-HEDEKAELQEAADVFPLSITPYYASLIDVKNFREDPIF 88

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q     EEL     E  DP+ ++  SP+ G+ HRYPDRIL  + H C VYCR C R+  
Sbjct: 89  KQSFVGVEELITENFEMADPLAEDKDSPVPGLTHRYPDRILFYISHACAVYCRHCTRKRK 148

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    ++ S K  E  L YI+   QI +V+ +GGDPL+L    L  +L  L  I H+++
Sbjct: 149 VGD-TDSIPSKKQIEKGLDYIRNNPQIRDVLLSGGDPLLLPDDYLDWILTELWSIPHIEV 207

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +RVP+V P RI  EL+  LK+   P++I  H NH  E ++ +  A+ +LA+ GI L
Sbjct: 208 IRIGTRVPVVLPYRITDELVNMLKKH-HPLWINTHFNHIKEITKSSKNALRKLADVGIPL 266

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL+G+ND P ++  L +     R++PYYL   DL+ G SHFR ++ +G +I+ SL
Sbjct: 267 GNQSVLLRGVNDCPNVIKKLNQKLAANRVRPYYLFQCDLSEGLSHFRTSVRKGVEIIESL 326

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D PGG GK+ +  + +   G     + ++  ++  Y
Sbjct: 327 IGHTSGFAVPRYVVDAPGGGGKIPVMPNYVISWGTDRVILRNYEGVITTY 376


>gi|229059963|ref|ZP_04197337.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603]
 gi|228719376|gb|EEL70980.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603]
          Length = 472

 Score =  486 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 123/352 (34%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  ++ + +K  +    + +TP  A L+NP +P  PI  Q 
Sbjct: 31  WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+AYI E  Q+ +V+ +GGD L+++ K L+ VLK LR I H++I+R 
Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHIEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   +K+   PV++  H N   E +EE+  A   LANAG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379


>gi|51246011|ref|YP_065895.1| L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54]
 gi|50877048|emb|CAG36888.1| probable L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54]
          Length = 439

 Score =  486 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 129/355 (36%), Positives = 209/355 (58%), Gaps = 6/355 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQ--IDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
            QLR+ ++ S +   +   I+ ++    +IKE    + +++TP   +LIN  +  NDPI 
Sbjct: 30  WQLRN-SIKSVEQFESLLGIEMDEKYRKKIKETLRKFPLSITPYYLSLINSEDYSNDPIF 88

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q  P  +EL+I P + EDP+ ++  SP+  I HRYPDR+LL++ + C +YCR C R+  
Sbjct: 89  IQSFPSPKELDISPHDMEDPLAEDKDSPVPNITHRYPDRVLLQVSNTCAMYCRHCTRKRK 148

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    ++   ++    + YI++   I +V+ +GGDPL+LS   L  +L  LR I HVQ+
Sbjct: 149 VGD-VDSIPLKQEILNGIEYIRQTPVIRDVLLSGGDPLMLSDDYLDWILSELRTIPHVQV 207

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR+P+V P R+   L+  LK+   P+++  H NHP E +     A+++LANAGI L
Sbjct: 208 IRIGSRMPVVLPYRVTDSLVAMLKKH-HPLWVNTHFNHPREVTASTREALAKLANAGIPL 266

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P I+ +L+   VE R++PYYL+  DLA G +HFR  + +G +I+ SL
Sbjct: 267 GNQSVLLAGVNDCPRIMKSLVHKLVENRVRPYYLYQCDLAEGLNHFRTPVGKGIEILESL 326

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           +   SG   P Y++D PGG GK+ ++ + +         + ++  ++  Y    S
Sbjct: 327 RGHTSGFAVPTYVVDAPGGGGKIPLNPNYLVSFSTNKVILRNYEGVITTYQEPDS 381


>gi|91772337|ref|YP_565029.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
 gi|91711352|gb|ABE51279.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
          Length = 435

 Score =  486 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 126/355 (35%), Positives = 202/355 (56%), Gaps = 6/355 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            QL+H  + + + + L   N    E+ +++KE    + +++TP   +LI+  +  NDPI 
Sbjct: 29  WQLKHSIRDIETFERLLGINFEPPEK-EKLKETLEKFPLSITPYYLSLIDSDDFRNDPIF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q  P  EEL I  +E EDP+ ++  SP++GI HRYPDR+L  + +VC +YCR C R+  
Sbjct: 88  LQSFPSPEELIISADELEDPLSEDTDSPVEGITHRYPDRVLFHISNVCSMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG     +   +     + YI+   QI +V+ +GGDPL+LS   L  +L  +  I HV++
Sbjct: 148 VGD-IDYIPEKEKILEGIEYIRNTPQIRDVLLSGGDPLMLSDDFLDWILTEINSIPHVEV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR+P+V P RI  EL+  LK+   P+++  H NHP E +  +  A+ +LA+AGI L
Sbjct: 207 IRIGSRMPVVLPYRITDELVDVLKKH-HPIWLNTHFNHPREMTFSSRQALKKLADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND   I+  L+   V+ R++PYYL+  DL+ G SHFR  I +G +I+ +L
Sbjct: 266 GNQTVLLAGVNDCQRIIKKLVHKLVQNRVRPYYLYQCDLSEGLSHFRTPIGKGIEIMENL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               SG   P Y++D P G GK+ +  + I         + ++  ++  Y    S
Sbjct: 326 IGHTSGFSVPTYVIDAPHGGGKIPVMPNYIISWSTNRVILRNYEGVITSYKEPES 380


>gi|149179692|ref|ZP_01858197.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1]
 gi|148851884|gb|EDL66029.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1]
          Length = 468

 Score =  486 bits (1253), Expect = e-135,   Method: Composition-based stats.
 Identities = 118/352 (33%), Positives = 198/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + T+ +  DL     +  E+ + ++  +    + +TP  A L+N  +   PI  Q 
Sbjct: 31  WQLTN-TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYAWLMNEEDDRCPIRMQS 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E++    + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 90  VPIGKEIHKTKYDMEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  + A+ YI+E  Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R 
Sbjct: 149 QIGMGVPKKQLDEAINYIRETPQVRDVLLSGGDGLLINDKILEYVLKNLRDIPHVEIIRI 208

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI   L   LK+   PV++  H N   E +EE+  A   L +AG+ + +Q
Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKKACEMLVDAGVPVGNQ 267

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND   I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ +  + +         + +   ++  YP   +
Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYMISQSADKVVLRNFEGVITTYPEPEN 379


>gi|310780280|ref|YP_003968612.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter
           polytropus DSM 2926]
 gi|309749603|gb|ADO84264.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter
           polytropus DSM 2926]
          Length = 716

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 126/350 (36%), Positives = 202/350 (57%), Gaps = 6/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
            QL+H ++   + L +     +  +    +++    +  A TP   +LI+  +  NDP+ 
Sbjct: 28  WQLKH-SIKDIETLESVFDVELDAKDKKSMQKTIEQFPFAATPYYLSLIDIGDYKNDPVY 86

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q +P  EELN+   +  DP+ +++ SP+ GI HRYPDR+LL + +VC +YCR C R+  
Sbjct: 87  KQAVPDIEELNLTNCDMSDPLHEDHDSPVPGITHRYPDRVLLLVSNVCSMYCRHCTRKRK 146

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG     +   +     + YI+  ++I +V+ +GGDP +LS   L  +L  ++ I HV++
Sbjct: 147 VGDM-DNIPDKETIMNGIEYIKSHTEIRDVLLSGGDPFLLSDDYLDWILSEVKKIPHVEV 205

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V PQRI   LI  LK+   P++I  H NHP EF+EE+  +ISRLA+AGI L
Sbjct: 206 IRIGTRTPVVLPQRITDNLINVLKKH-HPIWINTHFNHPKEFTEESKKSISRLADAGIPL 264

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL  +ND P+I+  L+   V  RI+PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 265 GNQSVLLSRVNDCPKIMKKLVHNLVANRIRPYYLYQCDLSEGLSHFRTPVGKGIEIIESL 324

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D PGG GK+ +    +         + ++  ++  Y
Sbjct: 325 IGHTSGFAIPRYVIDAPGGGGKIPVMPSYLISWSQNKVILRNYEGVITTY 374


>gi|332971462|gb|EGK10416.1| L-lysine 2,3-aminomutase [Desmospora sp. 8437]
          Length = 435

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 119/350 (34%), Positives = 197/350 (56%), Gaps = 3/350 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H T+    DL     +K+ ++  +        + +TP  A  ++  +P+ PI  Q 
Sbjct: 24  WQLTH-TIRKLDDLKQVINLKENEVGGVGISHQTIPLNITPYYALQMDTEDPSCPIRMQS 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL     + EDP+ ++  SP+ G+ HRYPDR+L  + + C +YCR+C RR   G 
Sbjct: 83  VPLSTELEQTKYDMEDPLLEDTDSPVPGLTHRYPDRVLFLITNQCSMYCRYCTRRRFSG- 141

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q G  +  K  +A + YI+   Q+ +V+ +GGD L+++ + ++ +LK LR I HV+I+R 
Sbjct: 142 QIGMGVPKKQMDACIDYIRSNPQVRDVLLSGGDGLLVNDRIIEYLLKNLREIPHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  +L   LK+   PV++  H NHP E + EA  A   LA+AG+ L +Q
Sbjct: 202 GTRAPVVFPQRITEDLCNILKKY-HPVWLNTHFNHPKEITPEAKRACEMLADAGVPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +V+L GIND P I+  L    V++R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 261 AVILAGINDCPHIMKKLNHELVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEYLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SG   P +++D PGG GK+ +  + +    +    + +   ++  YP  
Sbjct: 321 TSGYAVPTFVVDAPGGGGKIPVAPNYVISQSSQKTVLRNFEGVITSYPEP 370


>gi|124485172|ref|YP_001029788.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
 gi|124362713|gb|ABN06521.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
          Length = 453

 Score =  486 bits (1252), Expect = e-135,   Method: Composition-based stats.
 Identities = 128/350 (36%), Positives = 201/350 (57%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
            Q+RH  +++   Q +        ++ +E++     + I++TP   +LI+  +  NDPI 
Sbjct: 43  WQVRHAVRSIDMVQQVLGI-TFDPKEREELQRTVEKFPISITPYYLSLIDTEDYRNDPIF 101

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ  P   EL +   E  DP+ ++  SP + I HRYPDR+L  + + C +YCR C R+  
Sbjct: 102 RQAFPSPAELIVENYELSDPLAEDKDSPCECITHRYPDRVLFLVSNTCAMYCRHCTRKRK 161

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG  K ++   +     +AYI+E +QI +V+ +GGDP +LS + L  +L  L  I HV++
Sbjct: 162 VGD-KDSIPDREKILEGIAYIRENTQIRDVLLSGGDPFMLSDESLDWILTELTAIPHVEV 220

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +RVP+V P RI  +L+  LK+  KP++I    NHP E +  A AA+++L +AGI L
Sbjct: 221 IRIGTRVPVVLPFRITNQLVDILKKH-KPIWINTQFNHPKEMTPSAQAAVAKLVDAGIPL 279

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL  IND P I+  L+   V+ RI+PYYL+  DL+ G SHFR  I +G +I+ SL
Sbjct: 280 GNQSVLLARINDCPVIMKELVHQLVKNRIRPYYLYQCDLSEGISHFRTPIAKGIEIMESL 339

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D PGG GK+ +  + +         + ++  I+  Y
Sbjct: 340 IGHTSGFAVPRYVVDAPGGGGKIPVSPNYLLTWSVNKVVLRNYEGIICTY 389


>gi|160879786|ref|YP_001558754.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           phytofermentans ISDg]
 gi|160428452|gb|ABX42015.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           phytofermentans ISDg]
          Length = 393

 Score =  486 bits (1251), Expect = e-135,   Method: Composition-based stats.
 Identities = 135/350 (38%), Positives = 221/350 (63%), Gaps = 3/350 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q R++ +T+  +L  +  + +++  EI +    + +A+TP  A+L++P + N PI  Q 
Sbjct: 21  WQFRNR-ITTVAELTESIDLTEQEKQEITQCLGKFRMAITPYYASLMDPTDRNCPIRMQA 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E  ILP E  DP+ +   SP+ GIVHRYPDR+L  + H C +YCR C RR +VG 
Sbjct: 80  VPSNLENRILPCEMADPLNEEGESPVPGIVHRYPDRVLFLVTHQCSMYCRHCTRRRLVG- 138

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           ++  V+S K+ + A+ YI+ K +I +V+ +GGDPL +S ++L+ +LK LR I+HV+I+R 
Sbjct: 139 EEDMVISDKEIDTAVEYIRSKEEIRDVLISGGDPLTMSDEKLEHILKKLRSIEHVEIIRI 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+V P RI  EL   L+   +P++I  H NHP E +++++ A +RL +AGI L +Q
Sbjct: 199 GTRVPVVLPMRITLELTNMLRNY-EPIWINTHFNHPKEITKDSMDACARLVDAGIPLGNQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND  +I+ +L+   V+ RI+PYYL+  DL+ G  HFR  +E G +++  L+  
Sbjct: 258 SVLLRGINDSTDIMKDLLLKLVKNRIRPYYLYQCDLSQGLGHFRTRVETGIEMIHHLQGY 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           ISG   P +++D PGG GK+ ++   I  + +    + ++   ++ YP  
Sbjct: 318 ISGYAIPKFVIDAPGGGGKIPVNPEYIISIDDNEVVMRNYKGDLYTYPQP 367


>gi|242280776|ref|YP_002992905.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           salexigens DSM 2638]
 gi|242123670|gb|ACS81366.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 437

 Score =  485 bits (1250), Expect = e-135,   Method: Composition-based stats.
 Identities = 121/355 (34%), Positives = 203/355 (57%), Gaps = 6/355 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
             +R+ T+ +         I     +  + +     + +A+TP   +LI+  +  NDP+ 
Sbjct: 29  WHVRN-TIRTVSGFEKVLGIKFSDSERKKHEMTLRKFPLAITPYYLSLIDEEDYENDPVF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q  P  EEL I   +  DP+ ++  SP+ GI HRYPDR+L  + ++C +YCR C R+  
Sbjct: 88  LQSFPSPEELKIERCDMTDPLHEDEDSPVPGITHRYPDRVLFHISNLCSMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG Q  ++ S+   E  + YI+   Q+ +V+ +GGDP +LS ++L  +L  +  I+HV++
Sbjct: 148 VGDQ-DSIPSTSQLEKGIEYIRNTPQVRDVLLSGGDPFMLSDEKLDWILTKIGEIEHVEV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R+P+V P RI  +L+  LK+   P++I  H NHP E ++ +  AI++LA+AGI L
Sbjct: 207 VRIGTRMPVVLPYRITDDLVNMLKKH-HPLWINTHFNHPREVTDSSRRAIAKLADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P ++  L +  V+ R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCPRLIKTLNQKLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           +   SG   P Y++D PGG GK+ +  + I         + ++  ++  Y    S
Sbjct: 326 RGHTSGFAVPTYVVDAPGGGGKIPVMPNYIVSWATNKVVLRNYEGVITTYTEPDS 380


>gi|224367500|ref|YP_002601663.1| KamA1 [Desulfobacterium autotrophicum HRM2]
 gi|223690216|gb|ACN13499.1| KamA1 [Desulfobacterium autotrophicum HRM2]
          Length = 436

 Score =  484 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 121/350 (34%), Positives = 201/350 (57%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q++H  K++   + L     +  EQ   +K+  + + +++TP   +LIN  +  +DPI 
Sbjct: 28  WQIKHCVKSIDLLESLLEI-KLPFEQRVLLKKTMDKFPMSITPYYLSLINTDDLEHDPIF 86

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ +    EL    ++ +DP+ ++  SP+ GI HRYPDR+L  + + C +YCR C R+  
Sbjct: 87  RQSVASVRELEFSNDDMKDPLHEDKDSPVPGITHRYPDRVLFLVSNRCAMYCRHCTRKRK 146

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    ++   ++  A + YI+   +I +V+ +GGDPL+LS   L  +L  L  I+HV++
Sbjct: 147 VGD-VDSIPGKQEILAGIDYIRNNPEIRDVLLSGGDPLLLSTSYLDWILTELEKIEHVEV 205

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V P RI   +   LK    P++I  H NHP E +  A  A+++LANAGI L
Sbjct: 206 IRIGTRTPVVLPYRITDAMTNMLKRH-HPIWINTHFNHPREVTASARDALTKLANAGIPL 264

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND P I+ +L+   V  R++PYYL+  DL+ G +HFR  + +G +I+ SL
Sbjct: 265 GNQTVLLAGVNDCPRIMRSLVHKLVLNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESL 324

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG C P Y++D PGG GK+ +  + +         + ++  ++  Y
Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVILRNYEGVITTY 374


>gi|218961635|ref|YP_001741410.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730292|emb|CAO81204.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas
           acidaminovorans]
          Length = 415

 Score =  484 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 126/347 (36%), Positives = 209/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ +T+   L     ++ E+    K+ +  + +A+TP   +LI+  NP DPI  Q 
Sbjct: 21  WQIKNR-ITTHAQLSKYIELQPEEEAVFKDKAFSFRMAITPHYLSLIDHSNPYDPIRLQA 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+  E +I P +  DP+ ++  +P+ G+ HRYPDR+LL L   C +YCR C RR   G 
Sbjct: 80  IPRIAESHISPSDMADPLSEDADAPVPGMTHRYPDRVLLLLTDQCAMYCRHCTRRRKAG- 138

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +    +  ++ E AL YI+E  ++ +VI +GGDPL LS +RL  +L  L  I+H++I+R 
Sbjct: 139 EHDAPMPKENVEKALEYIKEHKEVRDVILSGGDPLTLSDERLDDILNRLSKIEHIEIVRL 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQR    L+  L++  K V++  H NHP E  E++  A++++A  GI + +Q
Sbjct: 199 GTRTPVVLPQRFTDSLLNILQKY-KFVWLNTHYNHPNELCEDSCKALAKIAETGIPMGNQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKG+ND+ +++  L+   V+ R++PYY++  DL+ G SHFR  I +G +I+ SL+  
Sbjct: 258 SVLLKGVNDNVDVMKALVHKLVKNRVRPYYIYQCDLSEGISHFRTPIAKGIEIMESLRGH 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGLC P Y++D PGG GK+ +  + +     G   + ++   +  Y
Sbjct: 318 TSGLCVPTYVVDAPGGGGKIPVMPNYVISQMPGRVILRNYEGFITAY 364


>gi|77919002|ref|YP_356817.1| hypothetical protein Pcar_1401 [Pelobacter carbinolicus DSM 2380]
 gi|77545085|gb|ABA88647.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
          Length = 457

 Score =  484 bits (1248), Expect = e-135,   Method: Composition-based stats.
 Identities = 123/350 (35%), Positives = 204/350 (58%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
              +H  + + + + +     +  +  + +      + +++TP  A+LI+P +  NDP+ 
Sbjct: 49  WHAKHAIQDIDTFERITGI-KLDPKFRENVALTLEKFPLSITPYYASLIDPEDYQNDPVF 107

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q  P   EL + P E  DP+ ++  SP+ GI HRYPDR+L  + ++C +YCR C R+  
Sbjct: 108 IQSFPSPHELEVDPREMADPLAEDKDSPVPGITHRYPDRVLFHVSNLCAMYCRHCTRKRK 167

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG Q  ++   ++ +  L YI E  QI +V+ +GGDPL+LS + L  +L  LR I HVQ+
Sbjct: 168 VGDQ-DSIPGREEIKQGLEYIAENPQIRDVLLSGGDPLMLSDEYLDWILTALRNIPHVQV 226

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R+P+V P RI  +L+  L++   PV++  H NHP E +  A AA+ +LA+AGI L
Sbjct: 227 IRIGTRMPVVLPYRITDDLVDMLRKH-HPVWVNTHFNHPRELTSSARAALRKLADAGIPL 285

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND P I+  LM   V+ R++PYYL+  DL+ G  HFR  + +G +I+ SL
Sbjct: 286 GNQTVLLAGVNDCPRIIKELMHRLVDNRVRPYYLYQCDLSEGLMHFRTPVGKGIEIMESL 345

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D PGG GK+ ++ + +  +      + ++  ++  Y
Sbjct: 346 IGHTSGFAIPTYVVDAPGGGGKIPLNPNYLVSLSTNKVILRNYEGVITTY 395


>gi|225181511|ref|ZP_03734953.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
           alkaliphilus AHT 1]
 gi|225167759|gb|EEG76568.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
           alkaliphilus AHT 1]
          Length = 423

 Score =  484 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 131/347 (37%), Positives = 202/347 (58%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ LT+ ++L     + + +   +    +   +A+TP  A L+NP + N PI  Q 
Sbjct: 23  WQLKNR-LTTVEELRQVVALTEAEERGVASCLDTLRMAITPYYAMLMNPEDSNCPIRLQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL     E EDP+ ++  SP  G+ HRYPDR+LL +   C +YCR C RR M G+
Sbjct: 82  IPTATELESGECEAEDPLFEDVDSPAPGLTHRYPDRVLLLITDQCSMYCRHCTRRRMAGT 141

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                L   D + AL YI+    I +V+ +GGD L++S   L  +L  LR I+HV+I+R 
Sbjct: 142 -NDQALPRSDVDKALDYIRNTPGIRDVLISGGDALLISDDYLDDILGKLRAIEHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQR+ PEL   LK+   P++I  H NHP E ++EA  A+S LA+AGI L +Q
Sbjct: 201 GTRTPVVLPQRVTPELCNVLKKH-HPLFINTHFNHPTELTDEAKKAVSMLADAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND P +   L +  +  RI+PYYL+  DL+ G  HFR ++ +G +I+  L+  
Sbjct: 260 SVLLRGINDCPYLYKVLAQRLLMNRIRPYYLYQCDLSPGLEHFRTSVAKGIEIIEHLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P +++D PGG GK+ +    +  + +    + ++  ++  Y
Sbjct: 320 TSGLAVPTFVVDAPGGGGKIPVSPQYMISMSDEKVILRNYEGVIAAY 366


>gi|325281770|ref|YP_004254312.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
 gi|324313579|gb|ADY34132.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
          Length = 416

 Score =  484 bits (1247), Expect = e-135,   Method: Composition-based stats.
 Identities = 125/347 (36%), Positives = 206/347 (59%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + +   L     +  ++ + I+E      +A+TP   +LI+P NP  PI +Q 
Sbjct: 22  WQVKNR-IETLDQLKKYIRLTPDEEEGIRESLKTLRMAITPYYLSLIDPDNPYCPIRKQS 80

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL+  P + EDP+ ++  SP+ G+ HRYPDR+L  +  +C +YCR C RR   G 
Sbjct: 81  VPTIEELHRSPADLEDPLHEDGDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 139

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                   +  +  + YI    Q+ +V+ +GGD L++S +RL+ ++K LR I HV+I+R 
Sbjct: 140 HHDCATPLERIDKCIEYIANTPQVRDVLLSGGDALLVSDERLEYIIKRLRGIPHVEIIRI 199

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL+  L++   P+++  H NHP E +EE+ AA +RLA+AGI L +Q
Sbjct: 200 GSRTPVVLPQRITPELVNMLRKY-HPIWLNTHFNHPNEITEESAAACARLADAGIPLGNQ 258

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND   ++  L+   V++R++PYY++  DL+ G  HFR  + +G +I+ +L+  
Sbjct: 259 SVLLRGINDCTHVMKKLVHELVKIRVRPYYIYICDLSVGIGHFRTPVSKGIEIIENLRGH 318

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK+ +    +   G     + +   +V  Y
Sbjct: 319 TSGYAVPTFVVDAPGGGGKIPVMPTYLISQGPNRVVLRNFEGVVTTY 365


>gi|150399966|ref|YP_001323733.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
           SB]
 gi|150012669|gb|ABR55121.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
           SB]
          Length = 433

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 124/355 (34%), Positives = 210/355 (59%), Gaps = 6/355 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+ + ++ S   L N   I     +  EI++    + +++TP  A+LI+  N   DPI 
Sbjct: 30  WQISN-SIKSLDMLENVLEIKFPDNERKEIQKAIEVFPMSITPYYASLIDISNLKKDPIY 88

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q +  K+EL +   E EDP+ ++  SP+ GI HRYPDR+L  +   C +YCR C R+  
Sbjct: 89  KQSVASKKELIMEDFEMEDPLAEDKDSPVIGITHRYPDRVLFYVNPNCAMYCRHCTRKRK 148

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           V S+  +  S ++ + A+ YI+E  ++ +V+ +GGDPL+LS   L  +L  +  I+HV++
Sbjct: 149 V-SESESNPSKEEIQKAIDYIKEHPEVRDVLLSGGDPLLLSDDYLDWILSEISSIEHVEL 207

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SRVP+V PQRI   L+  LK+   P+++  H NH  E ++ ++ A+ +L+NAGI +
Sbjct: 208 IRIGSRVPVVLPQRITDNLVNILKKY-HPIWVNTHFNHVVEITDTSVEALDKLSNAGIPI 266

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND P ++  L +  V  R++PYYL+  DL+ G SHFR +I +G +I+ SL
Sbjct: 267 GNQTVLLSGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSISKGLEIIESL 326

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               +G   P Y++D PGG GK+ +  + +   G+    + ++  ++  Y   S+
Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGVITTYKEPSN 381


>gi|315122590|ref|YP_004063079.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313495992|gb|ADR52591.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 351

 Score =  483 bits (1244), Expect = e-134,   Method: Composition-based stats.
 Identities = 284/344 (82%), Positives = 318/344 (92%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           LTSAQ LY A LI++EQI+ IKEISNHYSIALTP +ANLI+PHNPNDPIARQFIPQKEE+
Sbjct: 8   LTSAQQLYKAKLIEQEQINTIKEISNHYSIALTPFMANLIDPHNPNDPIARQFIPQKEEM 67

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           NILPEEREDPIGD+NHSPLKGIVHRYPDR+LLKLLH+CPVYCRFCFRREMVGSQKGT+LS
Sbjct: 68  NILPEEREDPIGDSNHSPLKGIVHRYPDRVLLKLLHICPVYCRFCFRREMVGSQKGTILS 127

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
            +D +AAL+YIQ   +IWEVIFTGGDPLILS  RL+ VLK L  IKHV+ILRFHSRVPIV
Sbjct: 128 PQDIDAALSYIQNHPKIWEVIFTGGDPLILSLNRLKTVLKMLMEIKHVKILRFHSRVPIV 187

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
           DPQRI+PE IQCLKE+GKP+YIAIHANHP EFS+E+++AIS+LA+AGIILLSQSVLLKGI
Sbjct: 188 DPQRISPEFIQCLKESGKPIYIAIHANHPREFSQESLSAISKLADAGIILLSQSVLLKGI 247

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           NDDP+ILA+LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQKIVASLKE ISG+CQP
Sbjct: 248 NDDPKILADLMRIFVESRIKPYYLHHPDLAPGTSHFRLTIEEGQKIVASLKENISGICQP 307

Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           FYILD+PGGYGKVKID+HNIKK+ + SY ITDH+NIVH YPP+S
Sbjct: 308 FYILDIPGGYGKVKIDSHNIKKIDDESYLITDHNNIVHHYPPRS 351


>gi|159906176|ref|YP_001549838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C6]
 gi|159887669|gb|ABX02606.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C6]
          Length = 433

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 127/350 (36%), Positives = 209/350 (59%), Gaps = 6/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57
            QL + ++     L       + + +  EI++    + +++TP  A+LI+  N + DPI 
Sbjct: 30  WQLSN-SIKDVDTLEKFLGINLDEGEKREIQKAIEVFPMSITPYYASLIDTENLDKDPIY 88

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q +   +EL +   E EDP+ +++ SP+ GI HRYPDR+L  +   C +YCR C R+  
Sbjct: 89  KQSVASSKELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPSCAMYCRHCTRKRK 148

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           V S+K +  S ++ + A+ YI+   +I +V+ +GGDPL+LS + L  +L  +  IKHV++
Sbjct: 149 V-SEKSSNPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVEL 207

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SRVP+V PQRI   L+  LK+   P++I  H NHP E ++E+  A+ +L+NAGI L
Sbjct: 208 IRIGSRVPVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVELTKESKVALDKLSNAGIPL 266

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND P ++  L +  V  R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 267 GNQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESL 326

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               +G   P Y++D PGG GK+ +  + I   G+    + ++  I+  Y
Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYIVSWGSDRVILRNYEGIITTY 376


>gi|317152560|ref|YP_004120608.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316942811|gb|ADU61862.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 437

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 123/355 (34%), Positives = 198/355 (55%), Gaps = 6/355 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+R+  + +  D      I     +    ++    + +A+TP   +LI+  +  NDP+ 
Sbjct: 29  WQVRN-AVKTVDDFERVLGIEFPARKKRVYEQTLGKFPMAVTPYYLSLIDVDDYANDPVF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q  P  EEL I   +  DP+ ++  SP+ GI HRYPDR+L  + + C +YCR C R+  
Sbjct: 88  LQSFPSPEELKIGRYDMTDPLHEDEDSPVPGITHRYPDRVLFHVSNTCAMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    ++ S  + E  L YI+   Q+ +V+ +GGDPL+LS ++L  +L  +R I HV++
Sbjct: 148 VGD-VDSIPSRDNLERGLEYIRNTPQVRDVLLSGGDPLMLSDEKLDWLLTEIRAIDHVEV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V P RI  EL+  L +   P+++  H NHP E +  +  AI RLA+AGI L
Sbjct: 207 VRIGTRTPVVLPYRITDELVSMLAKH-HPLWLNTHFNHPRELTASSRRAIQRLADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND   ++  L    ++ RI+PYYL+  DL+ G +HFR  I +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCQRLIRTLNLKLIKNRIRPYYLYQCDLSEGLTHFRTPIGKGIEIIESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           +   SG   P Y++D PGG GK+ +  + +   G     + ++  ++  Y    S
Sbjct: 326 RGHTSGFSVPTYVVDAPGGGGKIPVMPNYVVSWGPNKVVLRNYEGVITTYHEPES 380


>gi|309389800|gb|ADO77680.1| L-lysine 2,3-aminomutase [Halanaerobium praevalens DSM 2228]
          Length = 419

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 209/347 (60%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ +T +++L     +   + +EI+E+   + + +TP  A L++  + N P+  Q 
Sbjct: 28  WQVKNR-VTDSEELAKLINLDDGEKEEIEEVLEKFRMGITPYYATLMDADDHNCPVRMQA 86

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E ++   + EDP+ ++  SP+ GI HRYPDR+L  +   C +YCR C RR   G 
Sbjct: 87  VPDIMETHLSGSDMEDPLHEDGDSPVDGITHRYPDRVLFLITDQCSMYCRHCTRRRFAG- 145

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q  + +  +  +  L Y++   Q+ +V+ +GGD L++S  +L+ ++K L  I HV+++R 
Sbjct: 146 QNDSGVPMERIDKCLEYVRNTPQVRDVLLSGGDCLLISDDKLEYIIKELSEIDHVEVIRL 205

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI  +L+  LK+   P+++  H NHP E ++EA  A ++LANAGI L +Q
Sbjct: 206 GSRTPVVMPQRITDDLVNMLKKY-HPIWLNTHFNHPKEITKEAAEACAKLANAGIPLGNQ 264

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVL++GIND  E++ +L++  V++R++PYY++  DL+ G  HFR  + +G +I+ SL+  
Sbjct: 265 SVLMRGINDSSEVMMDLVQKLVQIRVRPYYIYQCDLSMGIEHFRTKVSKGLEIMESLRGH 324

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG C P Y++D PGG GK  +    +  +      + ++  ++  Y
Sbjct: 325 TSGYCVPTYVIDAPGGGGKTPVMPQYLISMSPTKVVLRNYEGVITTY 371


>gi|224170200|ref|XP_002339353.1| predicted protein [Populus trichocarpa]
 gi|222874958|gb|EEF12089.1| predicted protein [Populus trichocarpa]
          Length = 361

 Score =  483 bits (1243), Expect = e-134,   Method: Composition-based stats.
 Identities = 123/350 (35%), Positives = 208/350 (59%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            QL+H  + + + + L        ++   ++     + +++TP   +LIN  +  NDP+ 
Sbjct: 12  WQLKHSIQDIDTVETLLGIRF-DPKKRKALEMTVKKFPLSITPYYLSLINTDDHENDPVF 70

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q  P   EL I   +  DP+ ++  SP+ G+ HRYPDR+LL++ +VC +YCR C R+  
Sbjct: 71  KQAFPCSRELEIEKHDMADPLSEDKDSPVPGVTHRYPDRVLLQVSNVCSMYCRHCTRKRK 130

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG  + ++   +D    + Y+++  +I +V+ +GGDPL+LS   L  +L  +R I HVQ+
Sbjct: 131 VGD-RDSIPGREDILKGIDYVRQHPEIRDVLLSGGDPLMLSDDYLDWILTEVRRIPHVQV 189

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R+P+V P RI PEL++ LK+  +P+++  H NHP E +  A  A+  LA+AGI L
Sbjct: 190 IRIGTRMPVVLPYRITPELVERLKKH-QPLWLNTHFNHPREINASAKEALRLLADAGIPL 248

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND   I+ +L+   VE R++PYYL+  DLA G SHFR  + +G +I+ SL
Sbjct: 249 GNQSVLLAGVNDCQRIMKSLVHKLVENRVRPYYLYQCDLAEGLSHFRTPVGKGIEIMESL 308

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           +   SG   P Y++D PGG GK+ ++ + +  +      + ++  ++  Y
Sbjct: 309 RGHTSGFAVPTYVIDAPGGGGKIPMNPNYLISLSTNKVVLRNYEGVITTY 358


>gi|150402033|ref|YP_001329327.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C7]
 gi|150033063|gb|ABR65176.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C7]
          Length = 433

 Score =  482 bits (1242), Expect = e-134,   Method: Composition-based stats.
 Identities = 128/355 (36%), Positives = 212/355 (59%), Gaps = 6/355 (1%)

Query: 1   MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57
            QL + ++     L N     ++ E+  EI++    + +++TP  A+LI+  N + DPI 
Sbjct: 30  WQLSN-SIKDVDTLENFLGITLENEEKKEIQKAIEVFPMSITPYYASLIDIKNLDKDPIY 88

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q +   +EL +   E EDP+ ++  SP+ GI HRYPDR+L  +   C +YCR C R+  
Sbjct: 89  KQSVASSKELILENFEMEDPLSEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRK 148

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           V S+K +  S ++ + A+ YI+   +I +V+ +GGDPL+LS + L  +L  +  IKHV++
Sbjct: 149 V-SEKSSNPSKEEIQKAIDYIRNNDKIRDVLLSGGDPLLLSDEYLDWILSEISSIKHVEL 207

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SRVP+V PQRI   L+  LK+   P++I  H NHP E ++E+  A+ +L+++GI L
Sbjct: 208 IRIGSRVPVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPL 266

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND P ++  L +  V  R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 267 GNQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESL 326

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               +G   P Y++D PGG GK+ +  + I   G+    + ++  I+  Y   S+
Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYIVSWGSDRVILRNYEGIITTYVEPSN 381


>gi|256828026|ref|YP_003156754.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577202|gb|ACU88338.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
           baculatum DSM 4028]
          Length = 437

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 120/350 (34%), Positives = 202/350 (57%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
             +R+  K++   + L       +++   ++  +  + +A+TP   +LI+P +  NDP+ 
Sbjct: 29  WHVRNSIKSIEGVERLLGIEF-TEKERKALRNTTEKFPMAITPYYLSLIDPSDYRNDPVF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q  P  +EL I   +  DP+ ++  SP+ G+ HRYPDR+LL + + C +YCR C R+  
Sbjct: 88  MQAFPSTDELRIESHDMSDPLHEDEDSPVPGLTHRYPDRVLLHVSNTCAMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG  + ++ S +D    + YI+   Q+ +V+ +GGDP +LS   L  +L  +  I+HV++
Sbjct: 148 VGD-RDSIPSREDLRQGIEYIRNTPQVRDVLLSGGDPFLLSDDMLDWLLTEIGGIEHVEV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V P RI  EL++ LK+   P++I  H NHP E +  +  A+++LANAGI L
Sbjct: 207 VRIGTRTPVVLPYRITDELVEMLKKH-HPLWINTHFNHPAEITASSKQALAKLANAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P ++  L    V  R++PYYL+  DL+ G +HFR  I +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCPRLIKVLNHKLVRNRVRPYYLYQCDLSEGLTHFRTPIGKGIEILESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           +   SG   P Y++D PGG GK+ +  + I         + ++  ++  Y
Sbjct: 326 RGHTSGFSIPTYVVDAPGGGGKIPLMPNYIISWTANKVVLRNYEGVITTY 375


>gi|302340456|ref|YP_003805662.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
           DSM 11293]
 gi|301637641|gb|ADK83068.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
           DSM 11293]
          Length = 436

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 120/350 (34%), Positives = 202/350 (57%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
            QL+H  ++++S + L       K++  E++     + +++TP   +LI   +  NDPI 
Sbjct: 29  WQLKHSIRSISSFETLTGIQF-DKDKRQELEATVAQFPLSITPYYLSLIEKDDYQNDPIF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q      EL +   EREDP+ ++  SP++G+ HRYPDR+L  + ++C +YCR C R+  
Sbjct: 88  LQSFADPRELVVQKWEREDPLHEDKDSPVEGLTHRYPDRVLFHVSNICSMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    ++ +       + YI+    + +V+ +GGDPL+L    L  +L  LR I+HV+I
Sbjct: 148 VGD-VDSIPNKNQIRKGIDYIRNTPSVRDVLLSGGDPLMLDDDYLDWILTELRRIEHVEI 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR+P+V P R+  +L+  LK+   PV++  H NHP E +  +  A+++LA+AGI L
Sbjct: 207 VRIGSRMPVVLPYRVTDDLVLMLKKH-HPVWLNTHFNHPRELTHASRTALAKLADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P ++  L++  V  R++PYYL+  DL+ G +HFR  + +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCPRLMKTLVQKLVYSRVRPYYLYQCDLSEGLTHFRTPVGKGIEILESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D PGG GK+ I  + +         + ++  ++  Y
Sbjct: 326 IGHTSGFSVPTYVIDAPGGGGKIPIMPNYLLSWSPNKVVLRNYEGVITTY 375


>gi|254445491|ref|ZP_05058967.1| KamA family protein [Verrucomicrobiae bacterium DG1235]
 gi|198259799|gb|EDY84107.1| KamA family protein [Verrucomicrobiae bacterium DG1235]
          Length = 398

 Score =  482 bits (1241), Expect = e-134,   Method: Composition-based stats.
 Identities = 129/351 (36%), Positives = 214/351 (60%), Gaps = 3/351 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +T+ + L     +  E+       +   ++A+TP   NLI+  +PN PI +Q 
Sbjct: 30  WQLKNR-ITTLEQLEQHMELTPEERAGCAHANTKLAMAITPYFFNLIDREDPNCPIRKQV 88

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+++E+ +  EE  DP+G++ HSP+ G+VHRYPDR+L  +   C  YCR+C R  +V +
Sbjct: 89  IPREDEMTVGQEEMLDPVGEDGHSPVPGLVHRYPDRVLFLVTDRCAAYCRYCTRSRLVSN 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +       + E  L YI+E  ++ +V+ +GGDPL+LS K+L  +L  LR I+HV+ +R 
Sbjct: 149 AQDYNFHP-EFEQGLKYIEEHPEVRDVLLSGGDPLLLSDKKLDYLLGRLRAIEHVEFIRI 207

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR+P+  PQRI PEL +  K+ G P++++IH NHP E ++    A  RL+ AG+ L +Q
Sbjct: 208 GSRIPVFLPQRITPELCEIFKKHG-PIWMSIHTNHPKECTQTLKDACERLSFAGVPLGNQ 266

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLK +NDD E++  L+   V +R++PYY++  DL  G++H R  + +G +I+  L+  
Sbjct: 267 SVLLKDVNDDLEVMKALVHRLVRMRVRPYYIYQCDLITGSAHLRANVCKGIEIMKGLRGH 326

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
            +G   P +++D PGG GKV I+   I K+ + +    +    ++ YP K+
Sbjct: 327 TTGYSVPQFVIDAPGGGGKVPINPQYITKIDDEAIHFKNFEGKLYRYPLKT 377


>gi|85860656|ref|YP_462858.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
 gi|85723747|gb|ABC78690.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
          Length = 486

 Score =  481 bits (1239), Expect = e-134,   Method: Composition-based stats.
 Identities = 125/355 (35%), Positives = 205/355 (57%), Gaps = 6/355 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            QLRH  K L + + L +   + +    + K I   + +++TP   +LI+  +  NDP+ 
Sbjct: 80  WQLRHCIKDLDTFETLLDI-RLPETLRRQFKLIVEKFPMSITPYYLSLIDTEDLENDPVF 138

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q  P   EL++   +  DP+ ++  SP+ G+ HRYPDR+LL + + C +YCR C R+  
Sbjct: 139 KQSFPAINELDVQSTDMSDPLHEDRDSPVPGLTHRYPDRVLLLISNTCAMYCRHCTRKRR 198

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG  + T+ S +     + YI++  Q+ +V+ +GGDP +LS   L  +L  L+ I+HV++
Sbjct: 199 VGD-RDTIPSREQIMKGIEYIRDTPQVRDVLLSGGDPFLLSTDYLDWILIELKKIEHVEV 257

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P V P RI  EL++ LK+   P++I  H NHP E +  + AA+ +LA+AGI L
Sbjct: 258 IRIGTRTPAVLPYRITDELVEMLKKH-HPLWINTHFNHPRELTASSRAALRKLADAGIPL 316

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P I+ +L+   V  R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 317 GNQSVLLSGVNDCPRIMRSLVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 376

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               SG C P Y++D P G GK+ +  + +         + ++  ++  Y    S
Sbjct: 377 IGHTSGFCVPTYVIDAPAGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 431


>gi|270307638|ref|YP_003329696.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family
           [Dehalococcoides sp. VS]
 gi|270153530|gb|ACZ61368.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family
           [Dehalococcoides sp. VS]
          Length = 730

 Score =  479 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 133/362 (36%), Positives = 205/362 (56%), Gaps = 13/362 (3%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
             + H  K L + + L        E+   +++   ++ +++TP   +LI+P N  NDP+ 
Sbjct: 41  WHVSHTIKDLATVEKLLGVKF-SAEKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVF 99

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q +P   ELN    ++EDP+ ++  SP  GI HRYPDR+L  + + C +YCR C R+  
Sbjct: 100 IQSVPSAAELNFSCHDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 159

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    T LS  D    L YI+   Q+ +V+ +GGDPL+LS   L+ +L  L+ I HVQ+
Sbjct: 160 VGDVDKT-LSRDDLVKGLEYIKNTPQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQV 218

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +RVP+V PQRI P L++ +K+   PV+I  H NHP E +  +I A+  LA+AGI L
Sbjct: 219 IRIGTRVPVVLPQRITPHLVKIIKKY-HPVWINTHFNHPREITATSIRALRLLADAGIPL 277

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL  +ND P ++  L+   VE R++PYYL+  D A G SHFR +I +G +I+ +L
Sbjct: 278 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 337

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
               SG   P Y++D P G GK+ I  + +    +    + ++  I+  Y       PPK
Sbjct: 338 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397

Query: 351 SS 352
             
Sbjct: 398 CG 399


>gi|307353610|ref|YP_003894661.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
           petrolearius DSM 11571]
 gi|307156843|gb|ADN36223.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
           petrolearius DSM 11571]
          Length = 437

 Score =  479 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 121/350 (34%), Positives = 192/350 (54%), Gaps = 6/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
            QL H T+                E+ +E+KE    + +A+TP   +LI   +  NDPI 
Sbjct: 29  WQLSH-TIRDLDTFEKITGITFTNEKYEELKETLEKFPLAITPYYLSLIETEDYENDPIF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q  P   EL+I+ E+  DP+ ++  SP++GI HRYPDR+L  + + C +YCR C R+  
Sbjct: 88  MQSFPSVHELDIIEEDLADPLDEDRDSPVEGITHRYPDRVLFLVSNKCAMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG     +         + YI    Q+ +V+ +GGDPL+L    L+ +L  L  I HV+I
Sbjct: 148 VGD-VEYIPDKDQISKGIDYINNNPQVRDVLLSGGDPLLLDDSYLEWILSELTEIPHVEI 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR+P+V P RI+  L++ L++   P++     NHP E +  +  A+ +LA+ GI L
Sbjct: 207 VRIGSRLPVVLPYRIDSNLVEMLRQY-HPIWFNTQFNHPREITSSSTEALRKLADGGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P I+  LM   V  R++PYY++  DL+ G SHFR  + +G +I+ SL
Sbjct: 266 GNQSVLLSGVNDCPRIMKTLMHKLVMNRVRPYYMYQCDLSEGLSHFRTPVGKGIEIIESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           +   SG   P Y++D PGG GK+ +  + +         + ++  ++  Y
Sbjct: 326 RGHTSGFAVPTYVIDAPGGGGKIPLMPNYLISWSTNKVVLRNYEGVICTY 375


>gi|57234982|ref|YP_180969.1| GNAT family L-lysine 2,3-aminomutase/acetyltransferase
           [Dehalococcoides ethenogenes 195]
 gi|57225430|gb|AAW40487.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
           [Dehalococcoides ethenogenes 195]
          Length = 708

 Score =  479 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 132/362 (36%), Positives = 205/362 (56%), Gaps = 13/362 (3%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
             + H  K L + + L        E+   +++   ++ +++TP   +LI+P N  NDP+ 
Sbjct: 19  WHVSHTIKDLATVEKLLGVKF-SVEKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVF 77

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q +P   ELN    ++EDP+ ++  SP  GI HRYPDR+L  + + C +YCR C R+  
Sbjct: 78  IQSVPSAAELNFSCHDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 137

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    T LS  D    L YI+   Q+ +V+ +GGDPL+LS   L+ +L  L+ I HVQ+
Sbjct: 138 VGDVDKT-LSRDDLVKGLEYIKNTPQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQV 196

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +RVP+V PQRI P L++ +K+   PV++  H NHP E +  +I A+  LA+AGI L
Sbjct: 197 IRIGTRVPVVLPQRITPHLVKIIKKY-HPVWVNTHFNHPREITATSIRALRLLADAGIPL 255

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL  +ND P ++  L+   VE R++PYYL+  D A G SHFR +I +G +I+ +L
Sbjct: 256 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 315

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
               SG   P Y++D P G GK+ I  + +    +    + ++  I+  Y       PPK
Sbjct: 316 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 375

Query: 351 SS 352
             
Sbjct: 376 CG 377


>gi|126178166|ref|YP_001046131.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus
           marisnigri JR1]
 gi|125860960|gb|ABN56149.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1]
          Length = 437

 Score =  479 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 195/350 (55%), Gaps = 6/350 (1%)

Query: 1   MQLRHKT--LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
             +RH    +++ + L   +   K++  E++E ++ + + +TP   +LI+  +  NDPI 
Sbjct: 29  WHVRHAITEISTFERLLGVSF-GKDERRELEETASRFPLRITPYYLSLIDAKDLWNDPIF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q  P   EL + P++ EDP+ ++   P   I HRYPDR+L  + +VC +YCR C R+  
Sbjct: 88  MQCFPSPAELQVEPDDMEDPLAEDADHPAPCITHRYPDRVLFLVSNVCAMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    ++ S  +   +L YI+E   I +V+ +GGDP +L   RL  +L  L  I+HV++
Sbjct: 148 VGD-VDSIPSEAEVIESLDYIRENPGIRDVLLSGGDPFMLPDDRLDWILTELDDIEHVEV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V P RI  EL   L     P+++  H NHP E +  +  A++RLA+AGI L
Sbjct: 207 VRIGTRTPVVLPYRITEELCAMLARH-HPLWVNTHFNHPAEITASSQKALARLADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND   I+  L+   V  R++PYYL+  DL+ G +HFR  + +G +I+ +L
Sbjct: 266 GNQTVLLAGVNDCSRIMKTLVHKLVRNRVRPYYLYQCDLSEGLAHFRTPVSKGIEIIENL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D PGG GK+ +    +         + +   ++  Y
Sbjct: 326 IGHTSGFAVPTYVIDAPGGGGKIPVMPQYLISWSTNRVVLRNFEGVITTY 375


>gi|225163783|ref|ZP_03726082.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2]
 gi|224801613|gb|EEG19910.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2]
          Length = 391

 Score =  479 bits (1235), Expect = e-133,   Method: Composition-based stats.
 Identities = 134/352 (38%), Positives = 214/352 (60%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLR++ LT  +DL     +  ++   +    N  S+A+TP   NLI+  NP DP+  Q 
Sbjct: 30  WQLRNR-LTRLEDLERYMTLTPDERAGVLFAGNKLSLAITPYFFNLIDRDNPADPLRLQV 88

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+  E  +  EE  D +G++ HSP+ G+VHRYPDR+L  +   C  YCR+C R  +V +
Sbjct: 89  IPRAGESQLHAEEMLDSLGEDEHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +       + E  L YI+  S++ +V+ +GGDPL+LS ++L  +L  LR I HV+ +R 
Sbjct: 149 AQDYNFHP-EYEQGLRYIESHSEVRDVLLSGGDPLLLSDRKLDHLLGRLRAIPHVEFIRI 207

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR+P+  PQRI PEL +  K+ G P++++IH NHP+E +EE  AA  RL+ AG+ L +Q
Sbjct: 208 GSRIPVFMPQRITPELCEVFKKHG-PIWMSIHVNHPHECTEELRAACERLSYAGVPLGNQ 266

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+NDDP+ +  L+   + +R++PYYL+  DL  G SHF++ +  G +I+ +L+  
Sbjct: 267 SVLLRGVNDDPDTMRALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRRGLEIIKNLRGH 326

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            +G   P Y++D PGG GKV ++   ++K+ +      ++    + YP  S+
Sbjct: 327 TTGYAIPQYVIDAPGGGGKVPMNPDYVEKITDDEVIFRNYEGHTYRYPLTST 378


>gi|332702266|ref|ZP_08422354.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay]
 gi|332552415|gb|EGJ49459.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay]
          Length = 447

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 121/350 (34%), Positives = 202/350 (57%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
             +RH  + + S + L      + E     +     + +++TP   +LI+  +  NDP+ 
Sbjct: 29  WHIRHTIRDIESFETLTGIRF-EPEDRAGYERTLEKFPLSITPYYLSLIDTADYANDPVF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ  P   EL+I P +  DP+ ++  SP  GI HRYPDR+L  + ++C +YCR C R+  
Sbjct: 88  RQAFPSVRELDIGPHDMADPLHEDEDSPAPGITHRYPDRVLFHVSNLCAMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG + G +      E  LAYI+   ++ +V+ +GGDPL+L  + L  +L  LR I+HV++
Sbjct: 148 VGDE-GHIPRRAQMEQGLAYIRSAPRVRDVLLSGGDPLMLPDETLDWLLWNLRKIEHVEV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR+P+V P R+  +L+  +++   PV++  H NHP E +  A  A+++LA+AGI L
Sbjct: 207 VRIGSRMPVVLPYRVTDDLMSIIRKH-HPVWLNTHFNHPREVTRSAREALAKLADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P I+ +L+   V  R++PYYL+  DL+ G +HFR  + +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCPRIMRSLLHKLVRNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG  +P Y++D PGG GK+ +  + +         + ++  ++  Y
Sbjct: 326 VGHTSGFARPTYVIDAPGGGGKIPVTPNYVISWATNKVVLRNYEGVITTY 375


>gi|78187430|ref|YP_375473.1| hypothetical protein Plut_1576 [Chlorobium luteolum DSM 273]
 gi|78167332|gb|ABB24430.1| L-lysine 2,3-aminomutase [Chlorobium luteolum DSM 273]
          Length = 438

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 123/355 (34%), Positives = 201/355 (56%), Gaps = 6/355 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            Q+RH  +TL++ + L     +  EQ     +    + +++TP   +LIN  +  NDP+ 
Sbjct: 28  WQMRHSVRTLSAFESLLGI-TLSDEQRKAFGQTVAKFPMSITPYYLSLINTRDMANDPVF 86

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q +P   EL I+  +  DP+ ++  SP   + HRYPDR+LL + + CP+YCR C R+  
Sbjct: 87  LQSVPSPRELEIMTGDMADPLHEDADSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG  + T+         + YI+   Q+ +V+ +GGDP +LS   L  +L  L+ I+HV++
Sbjct: 147 VGD-RDTIPGRSAISEGIDYIRRTPQVRDVLLSGGDPFLLSDDYLDWILGELQAIEHVEV 205

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V PQRI P L+  LK+  +PV++  H NHP E ++ +  A++ LA+ G+ L
Sbjct: 206 IRIGTRTPVVLPQRITPALVAVLKKH-QPVWVNTHFNHPREITQSSRNALALLADGGLPL 264

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL GIND P I+  L+   V  R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               SG   P Y++D PGG GK+ +  + +         + ++  ++  Y    S
Sbjct: 325 IGHTSGFSVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379


>gi|51891173|ref|YP_073864.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863]
 gi|51854862|dbj|BAD39020.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863]
          Length = 448

 Score =  479 bits (1234), Expect = e-133,   Method: Composition-based stats.
 Identities = 127/348 (36%), Positives = 211/348 (60%), Gaps = 5/348 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ H+ +T+ + L     + +E+   I++  + + + +TP  A LI+P +P+ P+  Q 
Sbjct: 29  WQVSHR-ITNLEQLKQVVNLTEEEEAAIRDSQHLFRLGITPHYATLIDPDDPHCPMRLQA 87

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P+  EL     E  DP+ ++  SP+ GI HRYPDR+L  + H C +YCR C RR +VG 
Sbjct: 88  VPKYAELAWADYEMGDPLHEDVDSPVPGITHRYPDRVLFLITHECSLYCRHCTRRRIVGD 147

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q+    +    + A+AYI+   +I +V+ +GGDPL +  +RL+ V+K LR I HV+I+R 
Sbjct: 148 QEAMSTAM--LDQAIAYIRAHPEIRDVLISGGDPLAVPDRRLEYVIKKLRAIPHVEIIRI 205

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLS 239
            +R+P+V PQRI PEL+  L++   P+++  H NHP+E    +A  A+ RLA+AGI   +
Sbjct: 206 GTRMPVVLPQRITPELVNMLRQY-HPIWLNTHFNHPFEVQHPKAREAMERLADAGIPTGN 264

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLKG+ND   ++  L+   V++R +PYY+++ DL+ G SHFR ++ +G  I+ +L+ 
Sbjct: 265 QSVLLKGVNDCAVVMRRLVHELVKVRCRPYYIYNCDLSEGLSHFRTSVAKGVAIIEALRG 324

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             SG C P +++D PGG GK+ +    +    +G   + +    +  Y
Sbjct: 325 HTSGFCVPTFVVDAPGGGGKIPVMPQYLISQSDGRVILRNFEGKISIY 372


>gi|134045706|ref|YP_001097192.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
 gi|132663331|gb|ABO34977.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
          Length = 433

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 124/350 (35%), Positives = 209/350 (59%), Gaps = 6/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57
            QL + ++     L       + K +  EI++    + +++TP  A+LI+  N + DPI 
Sbjct: 30  WQLSN-SIKDVDTLEKFLGINLDKHEKKEIQKAIEVFPMSITPYYASLIDTKNLDKDPIY 88

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q +   +EL +   E EDP+ +++ SP+ GI HRYPDR+L  +   C +YCR C R+  
Sbjct: 89  KQSVASSKELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPNCAMYCRHCTRKRK 148

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           V S+K +  S ++ + A+ YI+   +I +V+ +GGDPL+LS + L  +L  +  IKHV++
Sbjct: 149 V-SEKSSNPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVEL 207

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SRVP+V PQRI   L+  LK+   P++I  H NHP E ++ +  A+ +L+++GI L
Sbjct: 208 IRIGSRVPVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVEITKASKVALDKLSDSGIPL 266

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND P ++  L +  V  R++PYYL+  DL+ G SHFR ++ +G +I+ SL
Sbjct: 267 GNQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESL 326

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               +G   P Y++D PGG GK+ +  + +   G+    + ++  I+  Y
Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITTY 376


>gi|73748139|ref|YP_307378.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
 gi|73659855|emb|CAI82462.1| L-lysine 2,3-aminomutase homologe, probable frameshift
           [Dehalococcoides sp. CBDB1]
          Length = 708

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 126/362 (34%), Positives = 202/362 (55%), Gaps = 13/362 (3%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
             + H  + LT+ + L        E+   +++    + +++TP   +LI+  N  NDP+ 
Sbjct: 19  WHISHTIRDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVF 77

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q +P   ELN    ++EDP+ ++  SP  GI HRYPDR+L  + + C +YCR C R+  
Sbjct: 78  IQSVPSAAELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 137

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG      LS  + +  L YI+   ++ +V+ +GGDPL+L    L+ +L  L+ I HVQ+
Sbjct: 138 VGD-IDKNLSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQV 196

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +RVP+V PQRI P L++ +++   PV+I  H NHP E +  +  A+  LA+AGI L
Sbjct: 197 IRIGTRVPVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPL 255

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL  +ND P ++  L+   VE R++PYYL+  D A G SHFR +I +G +I+ +L
Sbjct: 256 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 315

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
               SG   P Y++D P G GK+ I  + +    +    + ++  I+  Y       PPK
Sbjct: 316 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 375

Query: 351 SS 352
             
Sbjct: 376 CG 377


>gi|326203071|ref|ZP_08192937.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           papyrosolvens DSM 2782]
 gi|325986717|gb|EGD47547.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           papyrosolvens DSM 2782]
          Length = 425

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 130/347 (37%), Positives = 198/347 (57%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL ++ +T+   L     +  E+I  I++      +A+TP    L+NP +P  PI +Q 
Sbjct: 24  WQLANR-ITTITQLEQVVNLTVEEIRGIEKCLKKLRMAITPYYVTLMNPEDPACPIRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E  I   +  DP+ +   SP+ G+ HRYPDR LL +   C +YCR C RR   G 
Sbjct: 83  VPTINETYISTCDSSDPLHEGIDSPVNGLTHRYPDRALLLVTDQCSMYCRHCTRRRFAG- 141

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                LS  +   A+ YI+   QI +VI +GGD L +S++RL+ +LK+L+ I HV+++R 
Sbjct: 142 NDDKELSITNVNKAIEYIKNTKQIRDVILSGGDALCISNERLEYILKSLKAINHVEVIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+V PQRI PEL   LK+   P++I    NHP E + EAI A   L++AGI L +Q
Sbjct: 202 GTRVPVVMPQRITPELCNMLKKY-HPLWINTQFNHPNELTPEAIKACEMLSDAGIPLGNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL  IND P I+ NL++  V+ R++PYYL+  DL+ G  HFR  +  G +I+  L+  
Sbjct: 261 SVLLSNINDCPYIMKNLVQGLVKSRVRPYYLYQCDLSEGIEHFRTPVTVGVEIIEMLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK+ ++   +    N    + +   ++  Y
Sbjct: 321 TSGFAVPTFVIDAPGGGGKIPVNPQYLLSQSNDKVILRNFEGVICSY 367


>gi|118579512|ref|YP_900762.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus
           DSM 2379]
 gi|118502222|gb|ABK98704.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379]
          Length = 440

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 130/350 (37%), Positives = 204/350 (58%), Gaps = 6/350 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57
            QLRH  + + + + L        E+  E++E  + + +++TP   +LI+  N   DP+ 
Sbjct: 29  WQLRHAIRDIATFERLLGIKF-DAERKRELEETIDKFPLSITPYYLSLIDRTNYAVDPVF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ  P  +EL +   E EDP+ ++  SP+ GI HRYPDR+L ++ ++C +YCR C R+  
Sbjct: 88  RQAFPSPDELQVTSCEHEDPLHEDADSPVPGITHRYPDRVLFQVSNICSMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    ++    +    L YI+    + +V+ +GGDPL+L    L  +L+ LR I HVQ+
Sbjct: 148 VGD-VDSIPGKDEIMLGLEYIRRTPVVRDVLLSGGDPLMLPDSHLDWILRELRAIPHVQV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR+P+V P RI P LI+ L     P+++  H NHP E +  A  A+SRLANAGI L
Sbjct: 207 IRIGSRMPVVLPYRITPGLIRVLSRY-HPLWLNTHFNHPREITTSAREALSRLANAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND P I+  LM+  VE R++PYYL+  DL+ G SHFR  + +G +I+ SL
Sbjct: 266 GNQTVLLAGVNDCPMIIKTLMQRLVENRVRPYYLYQCDLSEGLSHFRTPVGKGMEIMESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               SG   P Y++D PGG GK+ +  + +  +      + ++  ++  Y
Sbjct: 326 VGHTSGFAVPTYVIDAPGGGGKIPVMPNYLITLATNKVVLRNYEGVITTY 375


>gi|45358424|ref|NP_987981.1| lysine 2,3-aminomutase [Methanococcus maripaludis S2]
 gi|44921182|emb|CAF30417.1| Lysine 2,3-aminomutase [Methanococcus maripaludis S2]
          Length = 433

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 126/350 (36%), Positives = 212/350 (60%), Gaps = 6/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
            QL + ++     L N   I   +++  EI++  + + +++TP  A+LI+  N   DPI 
Sbjct: 30  WQLSN-SIKDVDTLENFLGITFDEKEKTEIQKAIDVFPMSITPYYASLIDIKNLGKDPIY 88

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q +   +EL +   E EDP+ ++  SP+ GI HRYPDR+L  +   C +YCR C R+  
Sbjct: 89  KQSVASSKELILENFEMEDPLSEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRK 148

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           V S+K +  S ++ + A+ YI+  ++I +V+ +GGDPL+LS + L  +L  +  IKHV++
Sbjct: 149 V-SEKSSNPSKEEIQKAIDYIKNNNKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVEL 207

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SRVP+V PQRI   L+  LK+   P++I  H NHP E ++E+  A+ +L+++GI L
Sbjct: 208 IRIGSRVPVVLPQRITDNLVNVLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPL 266

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND P ++  L +  V  R++PYYL+  DL+ G SHFR ++ +G +I+ SL
Sbjct: 267 GNQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESL 326

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               +G   P Y++D PGG GK+ +  + +   G+    + ++  I+  Y
Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITSY 376


>gi|289432216|ref|YP_003462089.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
 gi|288945936|gb|ADC73633.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
          Length = 730

 Score =  479 bits (1233), Expect = e-133,   Method: Composition-based stats.
 Identities = 126/362 (34%), Positives = 202/362 (55%), Gaps = 13/362 (3%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
             + H  + LT+ + L        E+   +++    + +++TP   +LI+  N  NDP+ 
Sbjct: 41  WHISHTIRDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNYENDPVF 99

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q +P   ELN    ++EDP+ ++  SP  GI HRYPDR+L  + + C +YCR C R+  
Sbjct: 100 IQSVPSAAELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 159

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG      LS  + +  L YI+   ++ +V+ +GGDPL+L    L+ +L  L+ I HVQ+
Sbjct: 160 VGD-IDKNLSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQV 218

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +RVP+V PQRI P L++ +++   PV+I  H NHP E +  +  A+  LA+AGI L
Sbjct: 219 IRIGTRVPVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPL 277

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL  +ND P ++  L+   VE R++PYYL+  D A G SHFR +I +G +I+ +L
Sbjct: 278 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 337

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
               SG   P Y++D P G GK+ I  + +    +    + ++  I+  Y       PPK
Sbjct: 338 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397

Query: 351 SS 352
             
Sbjct: 398 CG 399


>gi|147668784|ref|YP_001213602.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
 gi|146269732|gb|ABQ16724.1| beta-lysine acetyltransferase / L-lysine 2,3-aminomutase
           [Dehalococcoides sp. BAV1]
          Length = 730

 Score =  478 bits (1232), Expect = e-133,   Method: Composition-based stats.
 Identities = 126/362 (34%), Positives = 202/362 (55%), Gaps = 13/362 (3%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
             + H  + LT+ + L        E+   +++    + +++TP   +LI+  N  NDP+ 
Sbjct: 41  WHISHTIRDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVF 99

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q +P   ELN    ++EDP+ ++  SP  GI HRYPDR+L  + + C +YCR C R+  
Sbjct: 100 IQSVPSAAELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 159

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG      LS  + +  L YI+   ++ +V+ +GGDPL+L    L+ +L  L+ I HVQ+
Sbjct: 160 VGD-IDKNLSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQV 218

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +RVP+V PQRI P L++ +++   PV+I  H NHP E +  +  A+  LA+AGI L
Sbjct: 219 IRIGTRVPVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITATSSRALGMLADAGIPL 277

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL  +ND P ++  L+   VE R++PYYL+  D A G SHFR +I +G +I+ +L
Sbjct: 278 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 337

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350
               SG   P Y++D P G GK+ I  + +    +    + ++  I+  Y       PPK
Sbjct: 338 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397

Query: 351 SS 352
             
Sbjct: 398 CG 399


>gi|116748157|ref|YP_844844.1| lysine 2,3-aminomutase YodO family protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116697221|gb|ABK16409.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB]
          Length = 460

 Score =  478 bits (1231), Expect = e-133,   Method: Composition-based stats.
 Identities = 121/352 (34%), Positives = 199/352 (56%), Gaps = 2/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLR++ +   + L     +  +++  +        +A+TP  A+L++ ++P+ P+ R  
Sbjct: 92  WQLRNR-IQDREALARIIRLSDDELKAVTSGRGPLPVAITPYYASLLDCNDPSQPVRRCV 150

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E    P E EDP+G+   S L  +VHRYPDR+L  +   C  YCR+C R  MVG+
Sbjct: 151 VPVDREYFHHPCETEDPLGEEKDSQLPNLVHRYPDRVLFLVTGYCSTYCRYCTRSRMVGN 210

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +       ++ + A+ YI+    I +V+ +GGDPL L +  L+ +L  LR I HV+ LR 
Sbjct: 211 RGTYRFGHREWDRAIEYIERTPTIRDVLLSGGDPLTLPNDHLKWLLSRLRRIPHVEFLRI 270

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            ++VP+V PQR+   L++ LK+   P++++IH  HP E + E   A +RLA+AGI L SQ
Sbjct: 271 GTKVPVVLPQRVTMGLVRMLKQY-HPLWMSIHFTHPDELTPETAHACTRLADAGIPLGSQ 329

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL G+ND+ E +  L    +++R+KPYYL+  D   G+SHFR  + +G +I+  L+  
Sbjct: 330 TVLLSGVNDNVETMTRLFHGLLKIRVKPYYLYQCDPIPGSSHFRTPVSKGLEIIRGLRGF 389

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P Y++D PGG GKV +    +         + ++   ++ YP  + 
Sbjct: 390 TSGYAVPTYVIDAPGGGGKVPLLPEYVAGRDGDDLLLRNYAGDLYRYPDPAG 441


>gi|302341654|ref|YP_003806183.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii
           DSM 2075]
 gi|301638267|gb|ADK83589.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii
           DSM 2075]
          Length = 430

 Score =  478 bits (1230), Expect = e-133,   Method: Composition-based stats.
 Identities = 129/351 (36%), Positives = 205/351 (58%), Gaps = 3/351 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ LT+ Q L     + +E+    + ++    +A+TP   +LI+  NP DP+ R  
Sbjct: 75  WQVRNR-LTNPQALERFFPLAQEERRAFEAVAGRLPMAITPYYLSLIDRQNPADPLRRAV 133

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E  + P E  DP+ ++      G+VHRYPDR+LL     C  YCR+C R  +VG 
Sbjct: 134 VPTWMEAVVSPGESHDPLAEDADMAAPGLVHRYPDRVLLLATGFCSTYCRYCTRSRLVGG 193

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             G     +  E ALAYI+    + +V+ +GGDPL ++  RL+ +L  LR ++HV+I+R 
Sbjct: 194 -GGMHTGKRALERALAYIEATPAVRDVLISGGDPLTMADDRLEWLLSRLRAMRHVEIIRI 252

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            S+VP V PQR+ P L + LK+   P++I++H  HP E + EA  A +RLA+AG+ L SQ
Sbjct: 253 GSKVPAVLPQRVTPALTRMLKKY-HPLFISLHFMHPAELTVEAAKACARLADAGVPLGSQ 311

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL GINDD   +  LM+  + LR++PYYL+  D   G++HFR  + +G +IVA L+  
Sbjct: 312 TVLLAGINDDVATMRALMQGLLRLRVRPYYLYQCDPICGSAHFRTPVAKGLEIVAGLRGH 371

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
            +G   P Y++D PGG GKV +   ++    + +  + ++    + YP  +
Sbjct: 372 TTGYAVPTYVIDAPGGGGKVALYPESVIGRQDEALLLRNYEGGQYAYPDNA 422


>gi|312881010|ref|ZP_07740810.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260]
 gi|310784301|gb|EFQ24699.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260]
          Length = 422

 Score =  476 bits (1227), Expect = e-132,   Method: Composition-based stats.
 Identities = 125/351 (35%), Positives = 199/351 (56%), Gaps = 3/351 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ +T+ + L     +   +  EI+E      +A+TP  A+LI+P +P DP+ RQ 
Sbjct: 23  WQVANR-ITTVEVLRRVIPLSDPEAREIQESLGALRMAITPYYASLIDPKDPEDPVRRQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E ++   +  DP+ ++  SP+ G+ HRYPDR +L L   C +YCR C RR   G 
Sbjct: 82  VPSILETHVAETDLRDPLHEDVDSPVPGLTHRYPDRGILLLTDQCSMYCRHCTRRRKAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +     S     AAL YI+      +V+FTGGDP ++    L  VL  +  I HV+I+RF
Sbjct: 141 ETDHAYSRDRIAAALDYIRRTPTFRDVLFTGGDPFLVDDGTLDWVLTEVGSIPHVEIVRF 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI  +L   LK    PV++  H NHP E + ++ AA ++LANAGI L +Q
Sbjct: 201 GTRTPVVMPQRITDDLCALLKRH-HPVWVNTHFNHPREITPQSRAACAKLANAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKG+ND P +   L +  + LR++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 260 SVLLKGVNDCPYVFRELNQQLLTLRVRPYYIYQCDLSQGIEHFRTPVAKGLEIMEYLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
            SG+  P +I+D PGG GK+ +  + +  + +    + ++  +   Y   +
Sbjct: 320 TSGMAVPTFIVDAPGGGGKIPLLPNYLVSMSDKRVVLRNYEGVFSTYAEPA 370


>gi|294055535|ref|YP_003549193.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita
           akajimensis DSM 45221]
 gi|293614868|gb|ADE55023.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita
           akajimensis DSM 45221]
          Length = 397

 Score =  476 bits (1225), Expect = e-132,   Method: Composition-based stats.
 Identities = 130/352 (36%), Positives = 210/352 (59%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +T  + L     +  ++       +   ++A+TP   NLINP +PNDPI RQ 
Sbjct: 30  WQLKNR-ITRLEQLEQYLDLSPDERAGCLFANKKLALAITPYFFNLINPKDPNDPIRRQV 88

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+  E  I P+E  DP+G+    P+ GIVHRYPDR+L  +   C  YCR+C R  +V +
Sbjct: 89  IPRAAESQIAPDEMLDPVGEEGTKPVDGIVHRYPDRVLFLVTDRCAAYCRYCTRSRLVSN 148

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +       + E+ L YI++ S+I +V+ +GGDPL+LS K+L  +L  LR I HV+ +R 
Sbjct: 149 AQDYNFHP-EFESGLEYIRQHSEIRDVLLSGGDPLLLSDKKLDYLLGELRKIPHVEFIRI 207

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR+P+  PQRI P+L    ++ G P++++IH NHP E S E  AA  RL+ AG+ + +Q
Sbjct: 208 GSRIPVFLPQRITPQLCDIFRKHG-PIWLSIHVNHPSECSLELKAACERLSYAGVPIGNQ 266

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKG+N+D  ++ +L+   + +R++PYYL+  DL  G++H R    EG +I+  L+  
Sbjct: 267 SVLLKGVNNDAGVMKSLIHRLLMMRVRPYYLYQCDLITGSAHLRTDPREGIEIIRQLRGH 326

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P +++D PGG GK+ ++   ++ +   +  + +     ++YP K  
Sbjct: 327 TSGYSIPQFVIDAPGGGGKIPLNPDYVEDISETTLILRNFQGERYEYPLKCG 378


>gi|52549348|gb|AAU83197.1| lysine 23-aminomutase [uncultured archaeon GZfos27A8]
          Length = 437

 Score =  475 bits (1224), Expect = e-132,   Method: Composition-based stats.
 Identities = 118/355 (33%), Positives = 200/355 (56%), Gaps = 6/355 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
            QL H  + + + +D+       +E+    +++   + +++TP   +LI+  +  NDPI 
Sbjct: 29  WQLSHAIRDIDTFEDI-TCIKFDEEEKQVYEKVLEKFPLSITPYYLSLIDYDDYKNDPIF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q  P   EL I   + +D + ++  SP+ GI HRYPDR+L  + ++C +YCR C R+  
Sbjct: 88  IQAFPDPRELVISKYDIKDSLAEDKDSPVPGITHRYPDRVLFLISNICSMYCRHCTRKRR 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    ++ +  +    + YI+   +I +V+ +GGDPL+LS   L  +L  L+ I HV++
Sbjct: 148 VGD-VDSIPNRSEILKGIEYIKNTPEIRDVLLSGGDPLMLSDSYLDWILTELQTIPHVEV 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +RVP V P RI  +L+  LK+   P++I    NHP E +  +  A+  LA+AGI L
Sbjct: 207 IRIGTRVPAVLPYRITDDLVNMLKKH-HPLWINTQFNHPREVTTSSREALRMLADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P ++  L++  V+ R++PYYL+  DL+ G +HFR  + +G +I+ SL
Sbjct: 266 GNQSVLLAGVNDCPILMKRLVQRLVQNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               SG   P Y++D PGG GK++I  + +         + ++  ++  Y    S
Sbjct: 326 IGHTSGFAVPSYVIDAPGGGGKIRIMPNYLISWSTNKVILRNYEGVITSYKEPDS 380


>gi|171912149|ref|ZP_02927619.1| Lysine 2,3-aminomutase [Verrucomicrobium spinosum DSM 4136]
          Length = 406

 Score =  475 bits (1223), Expect = e-132,   Method: Composition-based stats.
 Identities = 133/352 (37%), Positives = 211/352 (59%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ + S   L    ++ +E+   +    N  ++A+TP   NLI+P +P+ PI RQ 
Sbjct: 34  WQLKNR-VNSLAKLEEHLVLSEEERAGVLLSGNKLAMAITPHFFNLIHPTDPDCPIRRQV 92

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+ EE    P+E  DP G+++H P+ G+VHRYPDR+L  +   C  YCR+C R  +V  
Sbjct: 93  IPRIEETWDDPDEMSDPCGEDSHMPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRVVSG 152

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                L + + EA   Y++  +++ +V+ +GGD L+ S  +L+ +LK LR I H++ LR 
Sbjct: 153 VGDQELHT-EFEAVFKYLEAHTEVRDVLLSGGDALLFSDAKLEGILKRLRAIPHIEFLRI 211

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SRVPI  PQRI PEL   L +   P+++++H NHP E + E   A+ RLAN GI L +Q
Sbjct: 212 GSRVPIFLPQRITPELCTMLAKY-HPLWMSVHTNHPREITIEVKEALERLANHGIPLGNQ 270

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+NDDPE++  L+   +  R++PYYL+  DL  G+SH R ++ +G +I+ SL+  
Sbjct: 271 SVLLRGVNDDPEVMKALVHKLLMSRVRPYYLYQCDLIQGSSHLRTSVSKGLEIIESLRGH 330

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            +G   P +++D PGG GKV ++   +    +    I ++   V DYP   +
Sbjct: 331 TTGYGVPQFVIDAPGGGGKVPVNPEYVLAKDSHHTLIRNYEGKVFDYPEPET 382


>gi|307298172|ref|ZP_07577976.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306916258|gb|EFN46641.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 422

 Score =  474 bits (1220), Expect = e-131,   Method: Composition-based stats.
 Identities = 121/347 (34%), Positives = 202/347 (58%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ + +   L     I +E+   + E      +++TP  A L++P+N   PI RQ 
Sbjct: 23  WQVANR-VKTVDALRQIIDITEEEAHGVAECLRTLRMSITPYYATLMDPNNQRCPIRRQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +EL I   +  DP+ ++  SP+ G+ HRYPDR+L  +   C +YCR C RR   G 
Sbjct: 82  VPTDKELKIDKWDMIDPLHEDEDSPVPGLTHRYPDRVLFLITDQCSMYCRHCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q     + K+ + A+ YI+E  ++ +V+ +GGD L++    L+ +L  LR I HV+I+R 
Sbjct: 141 QLDRARTRKEIDDAIEYIRETPEVRDVLLSGGDALLVGDDYLEYILNELREIPHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQR+ PEL++ +++   PV+I  H NHP E + ++  A   LA+ GI L +Q
Sbjct: 201 GTRTPVVLPQRVTPELVKMIRKY-HPVWINTHFNHPLEITPDSTRACEMLADGGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND P I+  L+   V++R++PYY++  DL+ G  HFR +I +G  I+ SL   
Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIGIMESLIGN 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGLC P +++D PGG GK+++         +    + ++  ++  Y
Sbjct: 320 TSGLCVPTFVVDAPGGGGKIRVMPQYNISESDRVVVLRNYEGVITTY 366


>gi|241206810|ref|YP_002977906.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
 gi|240860700|gb|ACS58367.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
           bv. trifolii WSM1325]
          Length = 350

 Score =  473 bits (1217), Expect = e-131,   Method: Composition-based stats.
 Identities = 199/345 (57%), Positives = 259/345 (75%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K + S  DL  A L+       ++E++  Y++ALTP I+ LI+  +P+DPIARQF+P   
Sbjct: 5   KPIKSVDDLVKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q    
Sbjct: 65  ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +    AA  YI+   +IWEVI TGGDPL+LS +RL ++++ L  I HV+I+RFH+RVP
Sbjct: 125 LDAAAMRAAFDYIRGHEEIWEVILTGGDPLVLSPRRLGEIMEALAGIAHVKIIRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP++I+  LI  LK +GK VY+A+HANH  E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIGALKASGKTVYVALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IV +L+ +ISGLC
Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVEALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           QP YILD+PGG+GK  I    ++  G+G Y +TD+    H YPP 
Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYSVTDYRGGEHSYPPA 349


>gi|78355236|ref|YP_386685.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78217641|gb|ABB36990.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 454

 Score =  472 bits (1216), Expect = e-131,   Method: Composition-based stats.
 Identities = 120/355 (33%), Positives = 200/355 (56%), Gaps = 6/355 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57
             +R+  +T+ +A+ +        E+    K   + + +++TP   +LI+  +   DP+ 
Sbjct: 29  WHVRNSIRTVEAAEKILGV-TFSDEKRALYKRTLDKFPMSITPYYFSLIDQEDYESDPVF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q  P   ELN+ P +  DP+ ++  SP  GI HRYPDR+L  + ++C +YCR C R+  
Sbjct: 88  MQAFPDIRELNVSPHDMADPLHEDEDSPAPGITHRYPDRVLFHVSNLCSMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG  + +V      +  + YI+    I +V+ +GGDPL+LS +RL  +L  +R I HV+I
Sbjct: 148 VGD-RDSVPDRGQLKQGIEYIRRTPAIRDVLLSGGDPLMLSDERLDWLLGEIRSIPHVEI 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR+P+V P RI   L+  LK+   P+++  H NHP E +  +  A++R+A+AGI L
Sbjct: 207 IRIGSRMPVVLPYRITDGLLAVLKKH-HPLWLNTHFNHPRELTRTSRRALARMADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL  +ND P +   L +  V+ R++PYY++  DL+ G SHFR  + +G +I+ SL
Sbjct: 266 GNQSVLLADVNDCPRLFRTLNQKLVQNRVRPYYMYQCDLSEGLSHFRTPVGKGIEIIESL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               SG+  P Y++D PGG GK+ +  +     G     + ++  ++  Y    S
Sbjct: 326 VGHTSGMAVPTYVIDAPGGGGKIPMMPNYAISQGVNKVVLRNYEGVITTYTEPDS 380


>gi|134298608|ref|YP_001112104.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           reducens MI-1]
 gi|134051308|gb|ABO49279.1| L-lysine 2,3-aminomutase [Desulfotomaculum reducens MI-1]
          Length = 406

 Score =  472 bits (1215), Expect = e-131,   Method: Composition-based stats.
 Identities = 131/347 (37%), Positives = 204/347 (58%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ +T+   L     +  ++ D I      + +A+TP  A+LI   +   PI  Q 
Sbjct: 23  WQISNR-ITNVDKLSQFVHLTPKEKDGIAACLKKFRMAITPYYASLIKSEDRQCPIRMQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +EL     +  DP+ ++  SP+ G+ HRYPDR+LL +   C +YCR C RR + G 
Sbjct: 82  VPNPKELVCTRGDMRDPLHEDVDSPVPGLTHRYPDRVLLLVTDCCSMYCRHCTRRRIAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q    L     + A +YI+    I +V+ +GGDP  L+ ++L+ +LK LR IKHV+++RF
Sbjct: 141 QNDRSLPKAQLDRAFSYIRSNPTIRDVVISGGDPFTLADEQLEYILKKLRAIKHVEVIRF 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI PEL   L++   PV+I  H NHP E +  + AA++RLA AGI + +Q
Sbjct: 201 GTRTPVVLPQRITPELCNMLEKY-HPVWINTHFNHPREITPASSAAVARLAKAGIPVNNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKGIND   I+  L++  +++RI+PYYL+  DL+ G  HFR ++  G +I+ +L+  
Sbjct: 260 SVLLKGINDRAHIMKKLVQGLLKIRIRPYYLYQCDLSEGIGHFRTSVSTGIEIMENLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P Y++D PGG GK+ I  + +   G G   + +    V+ Y
Sbjct: 320 TSGLAVPTYVIDAPGGGGKIPIGPNYLLSQGQGKTVLRNFEGKVYLY 366


>gi|308272545|emb|CBX29149.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.]
          Length = 425

 Score =  471 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 128/351 (36%), Positives = 206/351 (58%), Gaps = 2/351 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ + + + L     +  E+ D IK   ++  +++TP  A+L++  NP  P+ R  
Sbjct: 67  WQLKNR-IQNYETLSTILTLSAEETDAIKTNGDNLPLSITPYYASLLDKTNPMHPLRRAV 125

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P + EL     E EDP+G++  SP+ GIVHRYPDR+L  +   C  YCR+C R  MVG 
Sbjct: 126 VPVRAELCRSFGEAEDPLGEDADSPVPGIVHRYPDRVLFLVTDFCSTYCRYCTRSRMVGR 185

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                  + + E AL YI+  + I +V+ +GGDPL L+   L+ +L  L  I+H++I+R 
Sbjct: 186 SSACHGGTSNWEKALNYIEANTGIRDVLLSGGDPLTLNDDALEWLLLRLCRIQHLEIVRI 245

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            ++VP+V PQRI   L + LK    P++I IH  HP E + E   A +RLA+AGI L SQ
Sbjct: 246 GTKVPVVLPQRITSRLARMLKRY-HPLWINIHFMHPEEVTPETSTACTRLADAGIPLGSQ 304

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGINDD + +  L    +++R++PYYL+  D   G+ HFR ++++G +I+  L+  
Sbjct: 305 TVLLKGINDDVDTMKELYHRLLKIRVRPYYLYQCDPIIGSGHFRTSVKKGLEIIKGLRGH 364

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
            SGL  P +++D PGG GK+ +    +         + ++ +++  YP  S
Sbjct: 365 TSGLAVPNFVIDAPGGGGKIPLLPEYVLGRYGDEILLKNYEDLIFRYPDSS 415


>gi|320334582|ref|YP_004171293.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211]
 gi|319755871|gb|ADV67628.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211]
          Length = 473

 Score =  471 bits (1214), Expect = e-131,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 194/347 (55%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ + S ++L     +   +          + + +TP  A+L++P +P  P+ RQ 
Sbjct: 37  WQLKNR-INSVEELEEVLRLTDSERQG-ASADGIFRLDITPYFASLMDPEDPTCPVRRQV 94

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL       ED + ++ HSP+ G+VHRYPDR+L+ +   C  YCR+C R  +VG 
Sbjct: 95  IPTHHELENFTSMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 154

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T     + +  L Y++   Q+ +V+ +GGDPL L+ K L  +L  LR I H++I+R 
Sbjct: 155 PTET-FKPDEYKLQLEYLRNTPQVRDVLLSGGDPLTLAPKVLGGLLAELRKIPHIEIIRI 213

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  P R+  EL   L E   PV++ IH NHP E + E   A  RL  AG+ L +Q
Sbjct: 214 GTRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVNHPKEITPEVAEACDRLTRAGVPLGNQ 272

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+ND P I+  LMR  V++R++PYY++  DL  G  H R T+ +G +I+ SL+  
Sbjct: 273 AVLLRGVNDHPVIMQKLMRELVKIRVRPYYIYQCDLVHGAGHLRTTVAKGLEIMESLRGH 332

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P Y++D PGG GK+ +  + +   G G   + +    +  Y
Sbjct: 333 TSGYSIPTYVVDAPGGGGKIPVMPNYVLAQGGGKVILRNFEGYIAAY 379


>gi|223940704|ref|ZP_03632543.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514]
 gi|223890631|gb|EEF57153.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514]
          Length = 412

 Score =  471 bits (1213), Expect = e-131,   Method: Composition-based stats.
 Identities = 129/352 (36%), Positives = 205/352 (58%), Gaps = 4/352 (1%)

Query: 1   MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            QL+++ +TS + L      +  E+       ++  ++A+TP   NLI+P + N PI  Q
Sbjct: 46  WQLKNR-ITSLEQLQKLMPTLTPEEHAGTVLANSKLALAITPYFFNLIDPADENCPIRTQ 104

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            IP+ +E +    E +DP G+++HSP+ G+VHRYPDR+L  +   C  YCR+C R  +V 
Sbjct: 105 VIPKVQETHTASWEMDDPCGEDSHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVS 164

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +  G      + E  + YI++   + +V+ +GGDPL+LS  +L+ +L  LR I HV+ LR
Sbjct: 165 NAAGYDFHP-EFEKQIEYIRKTPTVRDVLLSGGDPLLLSDDKLEYLLSQLRAIPHVEFLR 223

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             +R+PI  PQRI P L   LK+   P++I+IH NHP E + E   A+ RLA AGI L +
Sbjct: 224 IGTRIPIFLPQRITPALCAMLKKY-HPLFISIHTNHPRELTTEVREALGRLAEAGIPLGN 282

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+ +NDD   +  L++  +  R+KPYYL+  DL AG++H R ++ +G +I+  L+ 
Sbjct: 283 QSVLLRHVNDDLTTMRALVQKLLMCRVKPYYLYQCDLIAGSAHLRSSVRKGLEIMEGLRG 342

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
             +G   P Y++D PGG GKV ++   +         I +    + +YP  +
Sbjct: 343 HTTGYAIPQYVIDAPGGGGKVPVNPEYVLSRNADRVVIRNFEGKIFEYPEAA 394


>gi|116254324|ref|YP_770162.1| L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv. viciae 3841]
 gi|115258972|emb|CAK10081.1| putative L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 350

 Score =  471 bits (1212), Expect = e-131,   Method: Composition-based stats.
 Identities = 201/345 (58%), Positives = 260/345 (75%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K + S  DL  A L+       ++E++  Y++ALTP I+ LI+  +P+DPIARQF+P   
Sbjct: 5   KPIKSVDDLMKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q    
Sbjct: 65  ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   +AA  YI    +IWEVI TGGDPL+LS +RL ++++ L  I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIHSDEEIWEVILTGGDPLVLSSRRLGEIMEALAGITHVKIIRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP++I+  LI  LK +GK VYIA+HANH  E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYIALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVAALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           QP YILD+PGG+GK  I    ++  G+G Y +TD+    H YPP 
Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYTVTDYRGGEHSYPPA 349


>gi|289524159|ref|ZP_06441013.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502815|gb|EFD23979.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 442

 Score =  471 bits (1212), Expect = e-130,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 199/347 (57%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL ++ +T    L     +  E+   + +      +A+TP  A L++P++ N PI  Q 
Sbjct: 23  WQLVNR-ITDIDTLSRVIALTPEEKKALNDDLLELRMAITPYYATLMDPNDINCPIRMQA 81

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E N   E+  DP+ ++ ++P+ G VHRYPDR +L +   C +YCRFC RR   G 
Sbjct: 82  VPTSAERNTAEEDFHDPLAEDRYAPVPGFVHRYPDRGILLVTDQCSMYCRFCTRRRFAG- 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +     S ++ +AA+ YI+    + +++ TGGDPL +  + L+ +L +LR I HV+I+R 
Sbjct: 141 EIDRPKSREEIQAAIDYIERTPVLRDILVTGGDPLTMEDENLEWLLTSLRRIPHVEIIRI 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP V PQRI   L+  LK+   P++I +H NHP E +  +  A++ LANAGI L +Q
Sbjct: 201 GTRVPAVMPQRITNSLVTMLKKF-HPLWINVHFNHPKEITPHSARALNMLANAGIPLGNQ 259

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND P I   L    +  R++PYY++  DL+ G SHFR ++ +G +I+  L+  
Sbjct: 260 SVLLRGINDCPYIFKELFHKLLVNRVRPYYIYQCDLSRGISHFRTSVGKGIEIIEFLRGH 319

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            +G+  P +++D PGG GK+ +  + +   G     + +    +  Y
Sbjct: 320 TTGMAVPTFVIDAPGGGGKIPVMPNYVLAQGERRIVLRNFEGTITVY 366


>gi|15807697|ref|NP_285351.1| hypothetical protein DR_A0027 [Deinococcus radiodurans R1]
 gi|6460574|gb|AAF12280.1|AE001862_106 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 492

 Score =  470 bits (1211), Expect = e-130,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 199/347 (57%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ + S ++L     + + +          + + +TP  A+L++P +P  P+ RQ 
Sbjct: 49  WQLKNR-INSVEELQEVLTLTESEYRG-ASAEGIFRLDITPYFASLMDPEDPTCPVRRQV 106

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP +EEL       ED + ++ HSP+ G+VHRYPDR+L+ +   C  YCR+C R  +VG 
Sbjct: 107 IPTEEELQPFTSMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 166

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T  +  + EA L Y++   Q+ +V+ +GGDPL L+ K L ++L  LR I+H++I+R 
Sbjct: 167 PTET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDPLTLAPKVLGRLLSELRKIEHIEIIRI 225

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  P R+  EL   L E   P+++ IH NHP E + E   A  RL  AG+ L +Q
Sbjct: 226 GTRVPVFMPMRVTQELCDTLAEH-HPLWMNIHVNHPKEITPEVAEACDRLTRAGVPLGNQ 284

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND P I+  L+R  V++R++PYY++  DL  G  H R T+ +G +I+ SL+  
Sbjct: 285 SVLLRGVNDHPVIMQKLLRELVKIRVRPYYIYQCDLVHGAGHLRTTVSKGLEIMESLRGH 344

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P Y++D PGG GK+ +  + +         + +    +  Y
Sbjct: 345 TSGYSVPTYVVDAPGGGGKIPVAPNYVLSHSPEKLILRNFEGYIAAY 391


>gi|294496089|ref|YP_003542582.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
 gi|292667088|gb|ADE36937.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
          Length = 437

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 119/355 (33%), Positives = 200/355 (56%), Gaps = 6/355 (1%)

Query: 1   MQLRHKT--LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57
            QL+H    + + + L      K E+ D++K+    + +++TP   +LI+  +  NDPI 
Sbjct: 29  WQLKHSIGDVDTFETLLGIKF-KAEEKDKLKQTLEKFPLSVTPYYLSLIDTDDFRNDPIF 87

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            Q  P  +EL+I  ++ EDP+ ++  SP++GI HRYPDR+L  + + C +YCR C R+  
Sbjct: 88  LQAFPSPKELDIDEDDLEDPLSEDEDSPVEGITHRYPDRVLFHISNTCSMYCRHCTRKRK 147

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    ++ +       L YI+    + +V+ +GGDP +L    L  +L  LR I HV+I
Sbjct: 148 VGD-VDSIPTRDAVSEGLEYIRNTPHVRDVLLSGGDPFMLPDAYLDWILTKLREIPHVEI 206

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R+P+V P R+  +L++ LK+   P++I  H NHP E +  +  A+ +LA+AGI L
Sbjct: 207 IRIGTRMPVVLPYRVTDDLVEILKKH-HPLWINTHFNHPREVTASSREALRKLADAGIPL 265

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL G+ND   I+ +L+   V+ R++PYYL+  DL+ G SHFR  + +G +I+  L
Sbjct: 266 GNQTVLLSGVNDCHRIMKSLVHKLVQNRVRPYYLYQCDLSEGLSHFRTPVGKGIEIMEHL 325

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               SG   P Y++D P G GK+ +    +         + ++  ++  Y    S
Sbjct: 326 IGHTSGFAVPTYVIDAPHGGGKIPVMPSYLISWSTNRVILRNYEGVITSYKEPDS 380


>gi|297568546|ref|YP_003689890.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924461|gb|ADH85271.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 443

 Score =  470 bits (1210), Expect = e-130,   Method: Composition-based stats.
 Identities = 126/355 (35%), Positives = 200/355 (56%), Gaps = 6/355 (1%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57
             LRH  K++ + + L N      E+  E++E    + +A+TP   +LI+  N   DP+ 
Sbjct: 33  WHLRHTIKSIDTVERLLN-TTFSPEKRRELEETIARFPMAITPHYFSLIDRENYEEDPVF 91

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ +P   EL I   E  DP+ ++  SP+ GI HRYPDR+L  + ++C +YCR C R+  
Sbjct: 92  RQSVPSLSELKIGASEHSDPLAEDQDSPVTGITHRYPDRVLFHVSNLCAMYCRHCTRKRK 151

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    +V   K   A L YI++   I +V+ +GGDP +L    +  +L  LR I+HV++
Sbjct: 152 VGD-VDSVPGKKTLAAGLDYIRQTPAIRDVLLSGGDPFLLGDDLIDWLLTELRAIEHVEV 210

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V PQRI P L++ LK+   P+++  H NHP E +  +  A++ LA+AGI L
Sbjct: 211 IRIGTRTPVVLPQRITPRLVEILKKH-HPLWVNTHFNHPREITSRSRRALAMLADAGIPL 269

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLL G+ND P ++  L+   V  R++PYYL+  DL+ G + FR  + +G +I+ SL
Sbjct: 270 GNQSVLLAGVNDCPRVIKRLVHKLVANRVRPYYLYQCDLSEGLASFRTPVGKGIEIIESL 329

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
               SG   P Y++D PGG GK+ +  + +         + +   ++  Y    S
Sbjct: 330 IGHTSGFAVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNFEGVITTYKEPDS 384


>gi|312126722|ref|YP_003991596.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311776741|gb|ADQ06227.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 409

 Score =  469 bits (1207), Expect = e-130,   Method: Composition-based stats.
 Identities = 128/346 (36%), Positives = 211/346 (60%), Gaps = 5/346 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +TSA+ L +   + +++  +I+++   Y  A++P   +LI+P++PN PI RQ 
Sbjct: 63  WQLKNR-ITSAKILKDLLNLDEKEAQQIEQVGKIYRFAISPYYLSLIDPNDPNCPIKRQS 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL    +   DP+ + + SP K +  RYPDR+++K+ ++C ++CRFC RR  +G 
Sbjct: 122 VPSSLELVEKGD--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRFIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+R 
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQRI  +L+  LK+   P+YI  H NHP E ++E+  A   LA++GI L +Q
Sbjct: 239 GTRAPVTLPQRITKDLVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL G+N+D  ++  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
            SG+  P YI++ P G GK  I  + +   G       +    V +
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKDKVVFRNWEGEVFE 403


>gi|197121711|ref|YP_002133662.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
 gi|196171560|gb|ACG72533.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
          Length = 415

 Score =  468 bits (1206), Expect = e-130,   Method: Composition-based stats.
 Identities = 125/347 (36%), Positives = 193/347 (55%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q R + +   + L     +  E+ +   +    + + +TP  A L++P +P  PI  Q 
Sbjct: 69  WQQRERVIR-LEQLERVLRVTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQS 127

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   ELNIL  + EDP+ +    P+ GI HRYPDR+L    H CPVYCR C R+  V  
Sbjct: 128 VPTMGELNILASDLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSD 187

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              +  + +  E +LAYI + ++I +V+ +GGDPL LS  RL  +L  LR I HV+I R 
Sbjct: 188 PT-SAAAKRQIEESLAYIAQHTEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRL 246

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQR+  + +  L+    PVY+  H NHP E + EA  A  RLA+AG ++ +Q
Sbjct: 247 GTRNLVTLPQRVTDDFVYMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQ 305

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLLKG+NDDP ++  L    + +RI+PYY++  DLA G SHFR  +E G +I+ +L+  
Sbjct: 306 MVLLKGVNDDPAVVKELNHKLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGH 365

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P +++D P G GK+ ++   +       + + +      +Y
Sbjct: 366 TSGLAVPQFVVDAPNGGGKIPVNPEYVVSHEGKRWVLRNFAGKQFEY 412


>gi|220916508|ref|YP_002491812.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954362|gb|ACL64746.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 415

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 125/347 (36%), Positives = 193/347 (55%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q R + +   + L     +  E+ +   +    + + +TP  A L++P +P  PI  Q 
Sbjct: 69  WQQRERVIR-LEQLERVLRVTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQS 127

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   ELNIL  + EDP+ +    P+ GI HRYPDR+L    H CPVYCR C R+  V  
Sbjct: 128 VPTMGELNILASDLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSD 187

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              +  + +  E +LAYI + ++I +V+ +GGDPL LS  RL  +L  LR I HV+I R 
Sbjct: 188 PT-SAAAKRQIEESLAYIAQHTEIRDVVISGGDPLSLSDDRLDHILGRLRAIPHVEIFRL 246

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQR+  + +  L+    PVY+  H NHP E + EA  A  RLA+AG ++ +Q
Sbjct: 247 GTRNLVTLPQRVTDDFVYMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQ 305

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLLKG+NDDP ++  L    + +RI+PYY++  DLA G SHFR  +E G +I+ +L+  
Sbjct: 306 MVLLKGVNDDPAVVKELNHKLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGH 365

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P +++D P G GK+ ++   +       + + +      +Y
Sbjct: 366 TSGLAVPQFVVDAPNGGGKIPVNPEYVVSHEGKRWVLRNFAGKQFEY 412


>gi|189218034|ref|YP_001938676.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4]
 gi|189184892|gb|ACD82077.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4]
          Length = 397

 Score =  468 bits (1205), Expect = e-130,   Method: Composition-based stats.
 Identities = 135/349 (38%), Positives = 204/349 (58%), Gaps = 4/349 (1%)

Query: 1   MQLRHKTLTSAQDLYN-ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            QL+++ L S + +     LI  E+   +       + +LTP   NLI+P NP+ P+ RQ
Sbjct: 29  WQLKNR-LNSLEQIEQRLFLIPDERRGLMFAAKEKLAFSLTPYFFNLIDPFNPDCPLRRQ 87

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            IP+ EEL  +P E  DP G++      G+VHRYPDR+L  +   C  YCR+C R  +V 
Sbjct: 88  VIPRAEELVSMPYEMMDPCGEDKDMVAPGLVHRYPDRVLFLVTDRCATYCRYCTRSRIVS 147

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                 L   D +    Y+++ ++I +V+ +GGDPL+LS  RL+K+L+ LR I H++I+R
Sbjct: 148 GVGSQKLEIDD-KLTFDYLKKHTEIRDVLISGGDPLLLSDGRLEKILRQLREIAHIEIIR 206

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             +RVPI  PQRI   L + LK    P++I IH+NHP E + EA  A+ +LA+ GI L +
Sbjct: 207 IGTRVPIFLPQRITESLCKVLKAY-HPLWINIHSNHPKELTLEAKTALEKLADTGIPLGN 265

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLKGINDDP+ +  L+   V  R++PYYL+  DL  GT HFR+ I  G +I+  L+ 
Sbjct: 266 QSVLLKGINDDPQTMLELVNKLVRCRVRPYYLYQCDLIQGTHHFRVPIRRGLEIMQKLRG 325

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
             +G   P Y++D PGG GK+ ++   +         + ++   ++ YP
Sbjct: 326 FTTGFAVPQYVVDGPGGGGKIPLNPDYVMGYYEDKVLLRNYEGKIYSYP 374


>gi|15889814|ref|NP_355495.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58]
 gi|15157746|gb|AAK88280.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58]
          Length = 363

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 200/353 (56%), Positives = 268/353 (75%), Gaps = 1/353 (0%)

Query: 1   MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
             + R +T+ + + L  A LI+ E ++ ++ ++  Y++A+TP +  L++ H+P DPIARQ
Sbjct: 8   WTMTRFETIKTPEALLEAGLIEAEALEGLRAVTQRYALAITPAVTGLMDSHDPQDPIARQ 67

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
           F+P   EL  LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG
Sbjct: 68  FVPDLAELVHLPEERDDPIGDDAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVG 127

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            Q   ++S ++ +AA AYI+E   IWEVI TGGDPL+LS +RL  ++K LR I HV+I+R
Sbjct: 128 PQGNGMMSPEELDAAFAYIKENPAIWEVILTGGDPLVLSPRRLSDLMKRLRDIPHVKIVR 187

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
           FH+RVP+VDP RI+  LI+ LK +GK  Y+A+HANH  E  + A  A +RL +AGI ++S
Sbjct: 188 FHTRVPVVDPDRIDAPLIEALKASGKTTYVALHANHARELGDAARNACARLIDAGIAMVS 247

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLKGINDDP +LA+LMR+FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+ 
Sbjct: 248 QTVLLKGINDDPAVLADLMRSFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRG 307

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            +SGLCQP Y+LD+PGG+GK  I  +  +K  +G Y ++D +   H YPP +S
Sbjct: 308 HVSGLCQPTYVLDIPGGHGKAMIGRNAAEKTRDGCYSVSDFNGNDHIYPPATS 360


>gi|312794434|ref|YP_004027357.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312181574|gb|ADQ41744.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 407

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 129/346 (37%), Positives = 210/346 (60%), Gaps = 5/346 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ L SA+ L     + +++  +I+E++  Y  A++P   +LI+P +PN PI +Q 
Sbjct: 63  WQLKNRVL-SAKTLKELLNLDEKETQQIEEVAKAYRFAISPYYLSLIDPDDPNCPIKKQS 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL    E   DP+ + + SP K +  RYPDR+++K+ ++C ++CRFC RR ++G 
Sbjct: 122 VPSSLELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+R 
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQRI  EL+  LK+   P+YI  H NHP E ++E+  A   LA++GI L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKYP-PIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL G+N+D  ++  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ +L+ +
Sbjct: 298 MVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIENLRGR 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
            SG+  P YI++ P G GK  I    +   G G     +    + +
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPSYLLYFGKGKVVFRNWEGEMFE 403


>gi|312621465|ref|YP_004023078.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201932|gb|ADQ45259.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 407

 Score =  468 bits (1204), Expect = e-130,   Method: Composition-based stats.
 Identities = 128/346 (36%), Positives = 209/346 (60%), Gaps = 5/346 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++  +S + L     + +++ ++I+E++  Y  A++P   +LI+P NPN PI +Q 
Sbjct: 63  WQLKNRVASS-KILKELLNLDEKEAEQIEEVAKSYRFAISPYYLSLIDPDNPNCPIKKQS 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL    E   DP+ + + SP K I  RYPDR+++K+ ++C ++CRFC RR ++G 
Sbjct: 122 VPSSFELIEKGE--LDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L  +L++LR I HV+I+R 
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLDWILRSLRQIPHVEIIRI 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQRI  EL+  LK+   P+YI  H NHP E ++E+  A   L++AG+ L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLSDAGVPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL G+N+D  ++  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
            SG+  P YI++ P G GK  I  + +   G       +    + +
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKDKVVFRNWEGEMFE 403


>gi|222087704|ref|YP_002546241.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84]
 gi|221725152|gb|ACM28308.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84]
          Length = 350

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 200/346 (57%), Positives = 263/346 (76%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + + +  DL  A LI   +   ++ ++  Y+IALTP +A LI+  +P DPIARQF+P   
Sbjct: 5   RPIRTVDDLEQAGLIDSAEALSLEVVAERYAIALTPTVARLIDKADPADPIARQFVPDMA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL + PEER DPI D+ +SP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q    
Sbjct: 65  ELVVTPEERADPISDHAYSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L     +AA AYI++  +IWEVI TGGDPL+LS +RL+++L+ L  I+HV+I+RFH+RVP
Sbjct: 125 LDGAALDAAFAYIRDHEEIWEVILTGGDPLVLSPRRLEEMLRQLADIEHVKIVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP +I+  LI  LK +GK VY+A+HANHP E + EA AA +RL +AGI+L+SQSVLLK
Sbjct: 185 VVDPLKIDGALIAALKASGKTVYVALHANHPRELTAEARAACARLVDAGIVLVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA+LM+ FVE RIKPYYLHHPDLA GTSHFRLTI EGQ IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLASLMKAFVETRIKPYYLHHPDLAPGTSHFRLTIAEGQAIVAALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGG+GK  I    ++++G G Y ++D+    H YPP+ 
Sbjct: 305 QPTYILDIPGGHGKADIGKSAVRELGEGCYSVSDYRGGEHLYPPEG 350


>gi|86359621|ref|YP_471513.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42]
 gi|86283723|gb|ABC92786.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42]
          Length = 349

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 201/345 (58%), Positives = 257/345 (74%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K + S  DL  A L        ++ ++  Y+I LTP I  LI+  +PNDPIARQF+P   
Sbjct: 5   KPIKSVDDLVEAGLATPADRAALEAVTARYAITLTPEITRLIDRADPNDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q    
Sbjct: 65  ELVVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   EAA  YI    +IWEVI TGGDPL+LS +RL++++K L  I HV+I+RFH+RVP
Sbjct: 125 LDAAAMEAAFDYIGSHQEIWEVILTGGDPLVLSPRRLREIMKALANISHVKIVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP++I+  LI  LK +GK VY+A+HANHP E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTMEARAACARLVDAGIVMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GINDDP ILA+LM+ FVE R+KPYYLHHPDLA GT HFRLTIEEGQ+IVA+L+ +ISGLC
Sbjct: 245 GINDDPAILADLMKAFVENRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVAALRGQISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           QP YILD+PGG+GK  +    ++  G+G Y ++D+    H YPP 
Sbjct: 305 QPTYILDIPGGHGKAVVSGSTVQATGDGCYSVSDYRGGEHSYPPA 349


>gi|209551368|ref|YP_002283285.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|209537124|gb|ACI57059.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 350

 Score =  467 bits (1203), Expect = e-129,   Method: Composition-based stats.
 Identities = 199/345 (57%), Positives = 259/345 (75%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K L SA DL  A L+       ++E++  Y+IALTP +  LI+  +P+DPIARQF+P   
Sbjct: 5   KPLKSADDLVMAGLVAPADRRALEEVAARYAIALTPDMTRLIDRADPDDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL ILPEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q    
Sbjct: 65  ELTILPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   +AA  YI+   +IWEVI TGGDPL+LS +RL+ +++ L  I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIRGHEEIWEVILTGGDPLVLSPRRLRDIMEALADIAHVKIVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP +++  L+  LK +GK VY+A+HANH  E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPDKVDAALVDALKASGKTVYVALHANHVRELTAEARAACARLIDAGIAMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTIEEGQ+IV+ L+ +ISGLC
Sbjct: 245 GVNDDPDVLAALMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVSQLRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           QP YILD+PGGYGK  +    ++  G+G Y ++D+    H YPP 
Sbjct: 305 QPTYILDIPGGYGKTVVSGSTVQARGDGCYSVSDYRGDEHSYPPA 349


>gi|190893895|ref|YP_001980437.1| L-lysine 2,3-aminomutase [Rhizobium etli CIAT 652]
 gi|190699174|gb|ACE93259.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CIAT 652]
          Length = 350

 Score =  466 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 197/346 (56%), Positives = 259/346 (74%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K + +  DL  A L   +    ++E++  Y+IALTPV+A LI+  +P+DPIARQF+P   
Sbjct: 5   KPIKTVDDLLQARLATPDDRAMLEEVAARYAIALTPVMARLIDRADPDDPIARQFVPDPA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL +   ER DPIGD  HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q    
Sbjct: 65  ELTVATGERADPIGDYAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   +AA  YI +  +IWEVI TGGDPL+LS +RL+ +++ L  I HV+I+RFH+R+P
Sbjct: 125 LDAAAMQAAFDYIADHQEIWEVILTGGDPLVLSPRRLRDIMEALAAIAHVKIVRFHTRIP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP++I+  LI  LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTGEARAACARLVDAGIAMISQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LMR FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMRAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGG+GK  I    I+  G+G Y ++D+    H YPP  
Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYTVSDYRGGEHSYPPAG 350


>gi|94985093|ref|YP_604457.1| hypothetical protein Dgeo_0988 [Deinococcus geothermalis DSM 11300]
 gi|94555374|gb|ABF45288.1| Lysine 2,3-aminomutase [Deinococcus geothermalis DSM 11300]
          Length = 483

 Score =  466 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 121/347 (34%), Positives = 192/347 (55%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ + S ++L     +   +          + + +TP  A+L++P +P  P+ RQ 
Sbjct: 41  WQLKNR-INSVEELEEVIRLTPSERAG-ASAEGIFRLDITPYFASLMDPEDPTCPVRRQV 98

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL       ED + ++ HSP+ G+VHRYPDR+L+ +   C  YCR+C R  +VG 
Sbjct: 99  IPTHHELEPFTAMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 158

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T     +    L Y++   Q+ +V+ +GGDPL L+ K L  +L  LR I+H++I+R 
Sbjct: 159 PTET-FKPDEYRLQLEYLRNTPQVRDVLLSGGDPLTLAPKVLAGLLSELRKIEHIEIIRI 217

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  P RI  EL   L E   P+++ IH NHP E + E   A  RL  AG+ L +Q
Sbjct: 218 GTRVPVFLPMRITQELCDVLAEH-HPLWMNIHVNHPKEITPEVAEACDRLTRAGVPLGNQ 276

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND P I+  L+R  V++R++PYY++  DL  G  H R T+ +G +I+ SL+  
Sbjct: 277 SVLLRGVNDHPVIMQKLVRELVKIRVRPYYIYQCDLVHGAGHLRTTVAKGLEIMESLRGH 336

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P Y++D PGG GK+ +  + +         + +    +  Y
Sbjct: 337 TSGYSVPTYVVDAPGGGGKIPVAPNYVLSHSPEKLILRNFEGYIAAY 383


>gi|86158970|ref|YP_465755.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775481|gb|ABC82318.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 375

 Score =  466 bits (1201), Expect = e-129,   Method: Composition-based stats.
 Identities = 125/347 (36%), Positives = 192/347 (55%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q R + +   + L     +  E+ +   +    + + +TP  A L++P +P  PI  Q 
Sbjct: 29  WQQRERVIR-LEQLERVLRVTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQS 87

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   ELNIL  + EDP+ +    P+ GI HRYPDR+L    H CPVYCR C R+  V  
Sbjct: 88  VPTMGELNILASDLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSD 147

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              +  + +  E +LAYI +  +I +V+ +GGDPL LS  RL  +L  LR I HV+I R 
Sbjct: 148 PT-SAAAKRQIEESLAYIAQHPEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRL 206

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQR+  + +  L+    PVY+  H NHP E + EA  A  RLA+AG ++ +Q
Sbjct: 207 GTRNLVTLPQRVTDDFVYMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQ 265

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLLKG+NDDP ++  L    + +RI+PYY++  DLA G SHFR  +E G +I+ +L+  
Sbjct: 266 MVLLKGVNDDPAVVKELNHKLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGH 325

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P +++D P G GK+ ++   +       + + +      +Y
Sbjct: 326 TSGLAVPQFVVDAPNGGGKIPVNPEYVVSHEGKRWVLRNFAGERFEY 372


>gi|312135958|ref|YP_004003296.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor
           owensensis OL]
 gi|311776009|gb|ADQ05496.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           owensensis OL]
          Length = 407

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 131/346 (37%), Positives = 212/346 (61%), Gaps = 5/346 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +TSA+ L     + +++  +I+E++  Y  A++P   +LI+P +PN PI +Q 
Sbjct: 63  WQLKNR-ITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPNCPIKKQS 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL    E   DP+ + + SP K +  RYPDR+++K+ ++C ++CRFC RR ++G 
Sbjct: 122 VPSSFELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+R 
Sbjct: 179 ETDTHASLDDITDAIEYVAKNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQ+I  EL+  LK+   P+YI  H NHP E ++E+  A   LA++GI L +Q
Sbjct: 239 GTRAPVTLPQKITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL G+N+D  I+  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKYIVRKLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
            SG+  P YI++ P G GK  I  + +   G G     +    V +
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKGKVVFRNWEGEVFE 403


>gi|326792528|ref|YP_004310349.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427]
 gi|326543292|gb|ADZ85151.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427]
          Length = 437

 Score =  466 bits (1200), Expect = e-129,   Method: Composition-based stats.
 Identities = 119/350 (34%), Positives = 193/350 (55%), Gaps = 6/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57
            Q+++ T+   + +     I     Q  +I+     + +A++P   +L++ HN  NDPI 
Sbjct: 30  WQVKN-TIRKVETVEMILGITFSDSQKFDIERTLAQFPMAISPYYLSLVDIHNYDNDPIF 88

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q  P   ELNI P +  DP+ +   SP   I HRYPDR+L  + +VC +YCR C R+  
Sbjct: 89  KQCFPSVLELNISPCDMSDPLHEEVDSPAPCITHRYPDRVLFHVSNVCGMYCRHCTRKRK 148

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           VG    ++ S +     + YI+    I +V+ +GGDP +LS   +  +LK +  I HV++
Sbjct: 149 VGDL-DSIPSKESLLQGIEYIKNTPVIRDVLLSGGDPFLLSDTMIDWLLKEITAIDHVEV 207

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  +R P+V P RI  EL+  LK+    +++  H NH  E + EA AA+ +L  AGI L
Sbjct: 208 VRIGTRTPVVLPFRITDELVSILKKYD-NIWLNTHFNHSREMTTEAGAALKKLKLAGIPL 266

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +QSVLLKGIND   I+ +L+   +   ++PYYL+  DL+ G  HFR  I  G +I+ +L
Sbjct: 267 GNQSVLLKGINDCTYIMKDLLHKLILNGVRPYYLYQCDLSEGLEHFRTNIGTGIEIMENL 326

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           +   SG   P Y++D PGG GK+ +  + +    +    + ++  ++  Y
Sbjct: 327 RGHTSGFAIPTYVIDAPGGGGKIPVMPNYLVSWSSNKVVLRNYEGVITTY 376


>gi|226355793|ref|YP_002785533.1| L-lysine 2,3-aminomutase [Deinococcus deserti VCD115]
 gi|226317783|gb|ACO45779.1| putative L-lysine 2,3-aminomutase [Deinococcus deserti VCD115]
          Length = 493

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 124/347 (35%), Positives = 195/347 (56%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ + S  +L     +   +          + + +TP  A+L++P +P  P+ RQ 
Sbjct: 41  WQLKNR-INSVAELEEVIRLTDSERQG-ASAEGIFRLDITPYFASLMDPEDPTCPVRRQV 98

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL       ED + ++ HSP+ G+VHRYPDR+L+ +   C  YCR+C R  +VG 
Sbjct: 99  IPTHHELTPFTSMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 158

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T  +  + EA L Y++   Q+ +V+ +GGDPL L+ K L ++L  LR I+H++I+R 
Sbjct: 159 PSET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDPLTLAPKVLGRLLAELRKIEHIEIVRI 217

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  P R+  EL   L E   PV++ IH NHP E + E   A  RL  AG+ L +Q
Sbjct: 218 GTRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVNHPREITPEVAEACDRLTRAGVPLGNQ 276

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND P I+  L+R  V++R++PYY++  DL  G  H R T+ +G +I+ SL+  
Sbjct: 277 SVLLRGINDHPVIMQKLVRELVKIRVRPYYIYQCDLVHGAGHLRTTVSKGLEIMESLRGH 336

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P Y++D PGG GK+ +  + +         + +    +  Y
Sbjct: 337 TSGYSVPTYVVDAPGGGGKIPVAPNYVLSHSPEKLILRNFEGYIAAY 383


>gi|158521904|ref|YP_001529774.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
           oleovorans Hxd3]
 gi|158510730|gb|ABW67697.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
           oleovorans Hxd3]
          Length = 454

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 126/350 (36%), Positives = 199/350 (56%), Gaps = 3/350 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ + +   L     +  E++    E+     + +TP   +L++   P  P+ R  
Sbjct: 90  WQLQNR-ICTPTALSRFLDLSLEEMGVFAELKTKLPLGVTPYYMSLLHGSAPGHPLRRTV 148

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E   LP E  DP+G+  H+ + G+VHRYPDR+LL +   C  YCR+C R  +VG 
Sbjct: 149 VPTVHEFFKLPGEENDPLGEEGHTQMPGLVHRYPDRVLLLVSGFCSTYCRYCTRSRLVGR 208

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            K    S    E A+ YI+    I +V+ +GGDPL LS  +L  +L  +R I HV+I+R 
Sbjct: 209 GK-IYPSRSRLEKAIDYIRNTPTIRDVLLSGGDPLTLSDAKLDWILGRIREIPHVEIIRI 267

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            ++VP V PQR+ PEL++ L++   P+++++H  HP E + EA  A + LA+AGI L SQ
Sbjct: 268 GTKVPAVLPQRVTPELVRVLRKY-HPLWMSLHFTHPEECTPEAYDACAMLADAGIPLGSQ 326

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGINDD   +  LM   + +R+KPYYL+  D  AG+ HFR ++  G +I+  L+  
Sbjct: 327 TVLLKGINDDVATMKALMHQMMRMRVKPYYLYQCDPVAGSGHFRTSVARGLEIIRGLRGH 386

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SG   P Y++D PGG GK+ +  + +    +    + ++ N +  YP  
Sbjct: 387 TSGYAVPTYVIDAPGGGGKIPLLPNYVVSSSDAGVVLENYENRLFTYPNP 436


>gi|312877848|ref|ZP_07737796.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795395|gb|EFR11776.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 407

 Score =  465 bits (1198), Expect = e-129,   Method: Composition-based stats.
 Identities = 130/346 (37%), Positives = 209/346 (60%), Gaps = 5/346 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ L SA+ L     + +++  +I+E++  Y  A++P    LI+P +PN PI +Q 
Sbjct: 63  WQLKNRVL-SAKTLKELLNLNEKETQQIEEVAKVYRFAISPYYLLLIDPDDPNCPIKKQS 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL    E   DP+ + + SP K +  RYPDR+++K+ ++C ++CRFC RR ++G 
Sbjct: 122 VPSSFELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+R 
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQRI  EL+  LK+   P+YI  H NHP E ++E+  A   LA++GI L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLADSGIPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL G+N+D  ++  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
            SG+  P YI++ P G GK  I    +   G G     +    + +
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPSYLLYFGKGKVVFRNWEGEMFE 403


>gi|283781148|ref|YP_003371903.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
           6068]
 gi|283439601|gb|ADB18043.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
           6068]
          Length = 436

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 204/351 (58%), Gaps = 3/351 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q R++ + + Q      ++  ++   + +  +   + +TP   +L++  + N P+ R  
Sbjct: 88  WQSRNR-IRTLQQFEKMLVLSSDERQALVDGGSMLPVGITPYYMSLLDREDANQPLRRTV 146

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E    P E +DP+G++ HSP  G+VHRYPDR+LL  L  C  YCR+C R  +VG 
Sbjct: 147 VPVTGEFLRTPGEADDPLGEDGHSPTPGLVHRYPDRVLLLALDFCSTYCRYCTRSRVVG- 205

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
               + S +  E A  YI++   I +V+ +GGDPL LS  +L  +L  LR I H++ +R 
Sbjct: 206 HGEIMPSEQRLEKAFEYIRQTPTIRDVLISGGDPLALSEDKLDWILGRLRSIPHLEFVRI 265

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +++P V PQRI P+LI+  K+   P++++IH  HP E + EA  A +RLA+AGI L SQ
Sbjct: 266 GTKMPAVLPQRITPQLIRVFKKYS-PLWMSIHFLHPDECTPEANQACARLADAGIPLGSQ 324

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+ND  + + +L+   + +R++PYY++  D  +G++HFR ++ +G +I+  L+  
Sbjct: 325 TVLLKGVNDRVDTMKDLVHRLLMMRVRPYYIYQCDPISGSAHFRTSVSKGLEIIEGLRGH 384

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
            +G   P Y++D PGG GK+ +  + +         + ++   V+ YP  +
Sbjct: 385 TTGYAVPTYVIDAPGGGGKIPLQPNYVVGRDGNDLLLRNYEGQVYRYPDPT 435


>gi|146295299|ref|YP_001179070.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145408875|gb|ABP65879.1| glutamate 2,3-aminomutase [Caldicellulosiruptor saccharolyticus DSM
           8903]
          Length = 407

 Score =  465 bits (1197), Expect = e-129,   Method: Composition-based stats.
 Identities = 130/346 (37%), Positives = 211/346 (60%), Gaps = 5/346 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +TSA+ L     + +++  +I+E++  Y  A++P   +LI+P +P+ PI +Q 
Sbjct: 63  WQLKNR-ITSAKILKELLNLDEKEAQQIEEVAKIYRFAISPYYLSLIDPSDPHCPIKKQS 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL    E   DP+ + + SP K I  RYPDR+++K+ ++C ++CRFC RR ++G 
Sbjct: 122 VPSSFELIEKGE--LDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+R 
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQRI  EL+  LK+   P+Y+  H NHP E ++E+  A   LA+ GI L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYVNTHFNHPREITKESKRACEMLADGGIPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL G+N+D  ++  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKYVVRRLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
            SG+  P YI++ P G GK  I  + +   G G     +    V +
Sbjct: 358 TSGMAIPTYIINAPKGKGKTPIMPNYLLYFGKGKVVFRNWEGEVFE 403


>gi|270307988|ref|YP_003330046.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS]
 gi|270153880|gb|ACZ61718.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS]
          Length = 439

 Score =  464 bits (1195), Expect = e-128,   Method: Composition-based stats.
 Identities = 129/344 (37%), Positives = 194/344 (56%), Gaps = 3/344 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q +++ +TS  ++     +  E+  ++  +S  + ++ TP   +LI+  N NDP+  Q 
Sbjct: 59  WQFKNR-VTSVAEIARFFHLSAEEYRDMDSVSAVFPLSATPYYLSLIDFDNVNDPVKLQL 117

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL        DP+G+ + S + G+VHRYPDR+++ L  +CPV CR C R+     
Sbjct: 118 MPDTAELCFDAYCCSDPLGEEHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             G V +  + +A LAYI++   I +VI +GGDPL LS  RL+ VL  LR I HV+I+R 
Sbjct: 177 NGGWVHTQAEIDAMLAYIRQNPVIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRI 236

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI+ EL   L + G  +++  H NHP E +EE+  A  RL  AG+ + +Q
Sbjct: 237 GTRYPVVLPQRIDDELCNMLSKYG-TIWLNTHYNHPNEITEESRRACDRLVRAGVPVNNQ 295

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKGIND   I  +L    +  +++PYYL   D   GT HF  TIE G  I+  L+  
Sbjct: 296 SVLLKGINDSVAIQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTTIETGVGIIEGLRGY 355

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            SGL  P Y++DLPGG GK+ +    +       Y I ++   +
Sbjct: 356 TSGLAVPNYVIDLPGGGGKITVQPDYVLDKQADEYIIRNYKGDI 399


>gi|218682609|ref|ZP_03530210.1| lysine 2,3-aminomutase YodO family protein [Rhizobium etli CIAT
           894]
          Length = 350

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 194/346 (56%), Positives = 257/346 (74%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K + S  DL  A L        ++E++  Y+IALTP +  LI+  +P+DPIARQF+P   
Sbjct: 5   KPIKSVDDLVTAGLAAPADRAALEEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q    
Sbjct: 65  ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   +AA  YI+   +IWEVI TGGDPL+LS +RL+++++ L  I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQAAFDYIRGHQEIWEVILTGGDPLVLSPRRLREIMEALAEIAHVKIVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP +I+   I  LK +GK VY+A+HANH  E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVDPGKIDDASIAALKASGKTVYVALHANHVGELTAEARAACARLVDAGIVMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LM+  VE+R+KPYYLHHPDLA GT+HFRLT+EEGQ IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAGVEIRVKPYYLHHPDLAPGTAHFRLTLEEGQSIVAALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGGYGK  +    ++  G G Y ++D+    H YPP +
Sbjct: 305 QPTYILDIPGGYGKAVVSASAVRARGEGCYSVSDYRGDEHCYPPAN 350


>gi|153004182|ref|YP_001378507.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152027755|gb|ABS25523.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 413

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 125/347 (36%), Positives = 195/347 (56%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q R + +T    L     +  ++   + E    + + +TP  A L++P +P+ PI  Q 
Sbjct: 67  WQQRER-VTRLDQLEKVIHLTADERRAVIESDAEFHMGITPYYAALMDPDDPSCPIRLQS 125

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL I P + EDP+ +    P+ GI HRYPDR+L    H CPVYCR C R+  V  
Sbjct: 126 VPTMGELTIAPADLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSD 185

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              +  + +  E +LAYI    +I +V+ +GGDPL LS +RL  +L  LR I HV+I R 
Sbjct: 186 PT-SAAAKRQIEESLAYISAHPEIRDVVISGGDPLSLSDERLDYILGRLRAIPHVEIFRL 244

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQR+  + +  L+    PVY+  H NHP E + EA  A  RLA+AG ++ +Q
Sbjct: 245 GTRNLVTLPQRVTDDFVHMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQ 303

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLLKG+ND+PE++  L    + +RI+PYY++  DLA G SHFR  +E G +I+  L+  
Sbjct: 304 MVLLKGVNDEPELVKELNHKLLLMRIRPYYIYQCDLAKGISHFRTPVETGIRIIEHLRGH 363

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P +++D P G GK+ ++ + +       + + ++    ++Y
Sbjct: 364 TSGLAVPHFVVDAPQGGGKIPVNPNYVVSHEGKRWVLRNYAGKEYEY 410


>gi|222530236|ref|YP_002574118.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           bescii DSM 6725]
 gi|222457083|gb|ACM61345.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           bescii DSM 6725]
          Length = 407

 Score =  464 bits (1194), Expect = e-128,   Method: Composition-based stats.
 Identities = 125/346 (36%), Positives = 211/346 (60%), Gaps = 5/346 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ + SA+ L +   + +++  +I+++   Y  A++P   +LI+P++PN PI +Q 
Sbjct: 63  WQLKNR-IASAKILKDLLNLDEKEAQQIEQVGKIYRFAISPYYLSLIDPNDPNCPIKKQS 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL    E   DP+ + + SP K +  RYPDR+++K+ ++C ++CRFC RR ++G 
Sbjct: 122 VPSSLELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+R 
Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLEWILRSLRQIPHVEIIRI 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQRI  EL+  LK+   P+YI  H NHP E ++++  A   L++AG+ L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKDSKRACEMLSDAGVPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL G+N+D  ++  L +  +++R+KPYY+ HP    GTSHF +TIEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDMYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
            SG+  P YI++ P G GK  I  + +   G       +    + +
Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKDKVVFRNWEGEMFE 403


>gi|39935581|ref|NP_947857.1| hypothetical protein RPA2515 [Rhodopseudomonas palustris CGA009]
 gi|39649434|emb|CAE27956.1| putative L-lysine 2,3-aminomutase [Rhodopseudomonas palustris
           CGA009]
          Length = 363

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 179/349 (51%), Positives = 244/349 (69%), Gaps = 4/349 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L    L   +    + E++  Y+IA+TP +A LI+  +P+DPIARQ+IP  EE
Sbjct: 14  TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPSAEE 73

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+ L  ER+DPIGD  H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG  K   L
Sbjct: 74  LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S + T AAL YI+   +IWEVIFTGGDPL+LS +RL +++  L  I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLAEIMAELAAIEHVKIVRFHTRLPV 193

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP RI P+L++ L+  GK  ++A+HANHP E + +A AA +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTGDARAACARIVDAGIPMVSQSVLLRG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+  +SGLCQ
Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGGYGK  +  + +        +  Y + D+   VH YPP S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGRDSRYRVADYCGEVHLYPPLS 362


>gi|227824114|ref|YP_002828087.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii
           NGR234]
 gi|227343116|gb|ACP27334.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii
           NGR234]
          Length = 350

 Score =  463 bits (1193), Expect = e-128,   Method: Composition-based stats.
 Identities = 210/347 (60%), Positives = 266/347 (76%)

Query: 5   HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
           H+ L +A DL  A LI     + I  +++ Y+IA++PV+ANLI+  +P DPI+RQF+P  
Sbjct: 4   HRPLRTAGDLVEAGLIDASAEEAIARVASRYAIAISPVVANLIDRTDPQDPISRQFVPDA 63

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            EL + PEER DPIGD  HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q   
Sbjct: 64  AELTLTPEERADPIGDGAHSPVSGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLG 123

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            L+  + +AA+AYI E  +IWEVI TGGDPL+LS +RLQ++L+ L  I HV+++RFH+RV
Sbjct: 124 TLTPSELDAAIAYISEHPEIWEVILTGGDPLVLSPRRLQEILERLDAIAHVKVVRFHTRV 183

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V+P RI+ +LI  LK +GK  Y+A+HANHP E + EA AA +RL +AGI+++SQSVLL
Sbjct: 184 PVVEPHRIDADLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLL 243

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           KG+NDDPE+LA LMR FVE RIKPYYLHHPDLA GTSHFRLTIE+GQ +VASL+ ++SGL
Sbjct: 244 KGVNDDPEVLAELMRAFVETRIKPYYLHHPDLAPGTSHFRLTIEKGQALVASLRGRVSGL 303

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           CQP YILD+PGG+GK  I    I+  G G Y +TD H   H YPPKS
Sbjct: 304 CQPTYILDIPGGHGKAVISASAIEAEGGGCYTVTDFHGNEHAYPPKS 350


>gi|268315713|ref|YP_003289432.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus
           DSM 4252]
 gi|262333247|gb|ACY47044.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus
           DSM 4252]
          Length = 396

 Score =  463 bits (1191), Expect = e-128,   Method: Composition-based stats.
 Identities = 127/350 (36%), Positives = 197/350 (56%), Gaps = 5/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+RH+ + +A++L     +  E+   I+     +   +TP  A+L++P +PN PI RQ 
Sbjct: 18  WQMRHR-IHTAEELSRWIRLTDEERRAIEATRGVFRWNITPYYASLMDPEDPNCPIRRQV 76

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P+ EEL        DP+ +  HSP+K ++H Y DR+   +   C +YCR+C R+ MVG 
Sbjct: 77  VPRLEELAPDLIGVMDPLEEVAHSPVKNLIHNYRDRVAFCVTSECAIYCRYCLRKRMVGD 136

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
               ++   + +AA+ YI    +I +V+ TGGDPL LS   L  +L  LR I HV+I+R 
Sbjct: 137 -AAFMMRKAELQAAIDYIAAHPEIRDVLLTGGDPLTLSETHLAWILDQLRAIPHVEIIRI 195

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R+P+  P RI PEL + L+    P++I  H NHP E + +A  AI RL  AGI + +Q
Sbjct: 196 GTRMPVKLPYRITPELCRLLERY-HPLWINTHFNHPKELTPDAAEAIDRLLRAGIPVGNQ 254

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GINDD   +  L    V +R++PYYL+   L  GT+HFR  IE+G  I+ +L+ +
Sbjct: 255 TVLLRGINDDVATMKALCEGLVRMRVRPYYLYQAQLIGGTAHFRTPIEKGMAIMRALQGR 314

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            +G   P Y+LD P  YGKV +D   ++        +     ++   P  
Sbjct: 315 TTGFAIPKYVLDTP--YGKVPLDGSYVRGRAGDYVIVETPRGVLWAEPNP 362


>gi|218674354|ref|ZP_03524023.1| L-lysine 2,3-aminomutase protein [Rhizobium etli GR56]
          Length = 350

 Score =  462 bits (1190), Expect = e-128,   Method: Composition-based stats.
 Identities = 197/346 (56%), Positives = 256/346 (73%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K L S  DL  A L        + E++  Y+IALTP +  LI+  +P+DPIARQF+P   
Sbjct: 5   KPLKSVDDLLQAGLATLGDRAMLDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q    
Sbjct: 65  ELTVAPEERADPIGDHTHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   + A  YI    +IWEVI TGGDPL+LS +RL+ +++ L  I HV+I+RFH+R+P
Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRIP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP++I+  LI  LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDAALIDALKASGKTVYVALHANHPSELTSEARAACARLVDAGIAMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGG+GK  I    I+  G+G Y ++D+    H YPP  
Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYSVSDYRGGEHFYPPAG 350


>gi|224368437|ref|YP_002602600.1| KamA2 [Desulfobacterium autotrophicum HRM2]
 gi|223691153|gb|ACN14436.1| KamA2 [Desulfobacterium autotrophicum HRM2]
          Length = 435

 Score =  462 bits (1189), Expect = e-128,   Method: Composition-based stats.
 Identities = 128/352 (36%), Positives = 212/352 (60%), Gaps = 5/352 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ + + + L     + +++   +    +   +++TP   +LI+P++P+ P+ +  
Sbjct: 85  WQIANR-VRTHERLGRMISLSEDEF--MVNSESQLPLSITPYYLSLISPNDPDQPLRKSV 141

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E   +  E +DP+G+++ SP+ G+VHRYPDR+L  LL  C  YCR+C R  +VG 
Sbjct: 142 VPTVHEWVKMGCESDDPLGEDHQSPVPGLVHRYPDRVLFLLLDFCSTYCRYCTRSRVVG- 200

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             G +      E A+ YI +   I +V+ +GGDPL LS  RL+ VL  LR I HV+I+R 
Sbjct: 201 HGGILAGRARWEKAIEYIAKTPTIRDVLLSGGDPLTLSDDRLEWVLSRLRKIPHVEIIRI 260

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            ++V  V PQRI P+L++ LK    P+++++H  HP E + EA  A + LA+AGI L SQ
Sbjct: 261 GTKVTTVLPQRITPKLVKMLKRY-HPLWMSLHFTHPDECTPEAYKACTMLADAGIPLGSQ 319

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGIND+ E +A+LM   +++R++PYYL+  D   G+ HFR +I++G +I+  L+  
Sbjct: 320 TVLLKGINDNVETMADLMHQLMKMRVRPYYLYQCDPITGSGHFRTSIDKGLEIIHGLRGF 379

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            SG   P Y++D PGG GK+ +    +K+    +  +T++ +    YP   S
Sbjct: 380 TSGYAVPTYVVDAPGGGGKIPLMPDYVKEHTRETLVLTNYEDKTFCYPDPVS 431


>gi|325972392|ref|YP_004248583.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
 gi|324027630|gb|ADY14389.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
          Length = 421

 Score =  461 bits (1188), Expect = e-128,   Method: Composition-based stats.
 Identities = 123/348 (35%), Positives = 203/348 (58%), Gaps = 4/348 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H+ +T+  DL       + + + +K     +  ++TP   +LI+P++P   + R  
Sbjct: 70  WQLFHR-ITTYADLCRFLTPTESEREALKSADTLFPFSVTPYYLSLIDPNDPTSALRRTV 128

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  EE  +   E  DP+ + + + ++G+VHRYPDR+L      C  YCR+C R  MVG 
Sbjct: 129 IPSIEESYVGKGESADPLAEEHTTAVQGLVHRYPDRVLFLTTSFCSTYCRYCTRSRMVGG 188

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
               +   K  E A+ YI+E +++ +V+ +GGDPL LS + +  +L  +  I HV+++R 
Sbjct: 189 HTEAL--QKHWEGAINYIKEHTEVRDVVISGGDPLTLSDEMIDYLLDQVTSIDHVEMVRI 246

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            ++VP+V PQRIN  L+  L++  KP+Y++IHA HP E ++E++ A + LA++G++L SQ
Sbjct: 247 GTKVPMVMPQRINESLLAILRKY-KPIYMSIHATHPDELTKESVRACNALADSGVVLGSQ 305

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+ND   +L +L    +  R+KPYYL   D  +G+ HFR T+++G+ ++  L+  
Sbjct: 306 TVLLKGVNDSVSVLTDLFHKLLRARVKPYYLFQCDPISGSEHFRTTVDKGKALMQGLRGF 365

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG   P Y++D PGG GKV I         +    + ++   V  YP
Sbjct: 366 TSGYAIPQYVIDTPGGGGKVPILPQYEVGQDDEHLYLRNYEGKVFTYP 413


>gi|325293926|ref|YP_004279790.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3]
 gi|325061779|gb|ADY65470.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3]
          Length = 354

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 196/349 (56%), Positives = 264/349 (75%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R +T+ + + L  A LIK E +++++ ++  Y++A+T  +A+L++  +P DPIARQF+P 
Sbjct: 3   RLETIKTPEALVEAGLIKTEALEDVRAVTQRYALAITSTMADLMDSRDPQDPIARQFVPD 62

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
             EL  LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q  
Sbjct: 63  LVELVHLPEERDDPIGDSAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGN 122

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
            ++S ++ +AA  YI+    IWEVI TGGDPL+LS +RL  ++  L+ + HV+I+RFH+R
Sbjct: 123 GMMSPEELDAAFDYIKANPAIWEVILTGGDPLVLSARRLSDLMTRLKDVPHVKIVRFHTR 182

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+VDP+RI+  LI+ LK +GK  Y+A+HANH  E  + A +A +RL +AGI ++SQ+VL
Sbjct: 183 VPVVDPERIDGPLIESLKASGKTTYVALHANHARELGQAARSACARLIDAGIAMVSQTVL 242

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           LKGINDD  ILA LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+  +SG
Sbjct: 243 LKGINDDSAILAELMRAFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRGHVSG 302

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           LCQP Y+LD+PGG+GK  I  +  +K  +G Y I+D +   H YPP +S
Sbjct: 303 LCQPTYVLDIPGGHGKATIGPNAAEKTRDGCYSISDFNGNDHIYPPPAS 351


>gi|20807659|ref|NP_622830.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
 gi|20516205|gb|AAM24434.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4]
          Length = 419

 Score =  460 bits (1185), Expect = e-127,   Method: Composition-based stats.
 Identities = 127/348 (36%), Positives = 197/348 (56%), Gaps = 4/348 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ ++  + L     + +E+I+ IK +S  Y  A++P  A+L++P NP  PI  + 
Sbjct: 70  WQIRNR-ISDVETLKKIVNLSEEEIENIKRVSTRYRWAISPYYASLMDPDNPFCPIRMRA 128

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +EL        DP+ +   SP   I  RYPDR+++ + + C ++CR C RR  +G 
Sbjct: 129 IPSIKELTDK-YGVPDPMAEEYTSPAPLITRRYPDRLIINVTNQCGMFCRHCQRRRNIG- 186

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +       +D EAAL YI+   +I +V+ TGGDPL L  +++  +L  L  I HV+I R 
Sbjct: 187 EVDYPAKHEDIEAALEYIRNNPEIRDVLITGGDPLTLEDEKIDWILSELDKIPHVEIKRI 246

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +  P+  PQRI  EL + L +   P+YI    NHP E +EEA  A  +LA AG+ L +Q
Sbjct: 247 GTAAPVTFPQRITDELCKILTKH-LPLYINTQFNHPKEVTEEAKEACFKLARAGVALGNQ 305

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGIN+DP ++  L    + + +KPYY+ H     GT+HF  T+++G +I+  L+  
Sbjct: 306 AVLLKGINNDPHVMKKLNHELLRIMVKPYYIFHAKSVQGTTHFVTTVQDGLEIMEQLRGY 365

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SGL  P+YI++ P G+GK  I    +  VG     I +    V +YP
Sbjct: 366 TSGLAIPWYIINAPEGHGKTPIVPQYLLMVGKEYVLIRNWEGKVFEYP 413


>gi|218461424|ref|ZP_03501515.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Kim 5]
          Length = 350

 Score =  459 bits (1181), Expect = e-127,   Method: Composition-based stats.
 Identities = 195/346 (56%), Positives = 256/346 (73%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K L +  DL  A L+       + E++  Y+IALTP +  LI+  +P+DPIARQF+P   
Sbjct: 5   KPLKNVDDLLQAGLVLPGHRAILDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q    
Sbjct: 65  ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L +   + A  YI    +IWEVI TGGDPL+LS +RL+ +++ L  I HV+I+RFH+RVP
Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP++I+  LI  LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK
Sbjct: 185 VVDPEKIDLALIAALKASGKTVYVALHANHPRELTSEARAACARLVDAGIAMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC
Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGG+GK  I    ++  G+G Y ++D+    H YP   
Sbjct: 305 QPAYILDIPGGHGKAVISESVVRATGDGCYSVSDYRGGEHSYPTAG 350


>gi|325111083|ref|YP_004272151.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
 gi|324971351|gb|ADY62129.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
          Length = 457

 Score =  458 bits (1179), Expect = e-127,   Method: Composition-based stats.
 Identities = 116/352 (32%), Positives = 199/352 (56%), Gaps = 3/352 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q +++ + S +       +   + + +++      + +TP   +L++P +P  P+ +  
Sbjct: 108 WQAQNR-VRSLEQFERMLELAPFEREALQQGGTMLPVGVTPYYMSLLDPTDPYQPLRKTV 166

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E    P E +DP+G++ HSP+ G+VHRYPDR+LL  L  C  YCR+C R  +VG 
Sbjct: 167 LPSTAEFVRTPGEADDPLGEDGHSPVPGLVHRYPDRVLLLALDFCSTYCRYCTRSRVVG- 225

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                 S    E    Y+Q   Q+ +V+ +GGDPL L  ++L  +L+ LR I H++ +R 
Sbjct: 226 HGEIAPSDARLEKIFQYLQNSPQVRDVLISGGDPLALKDEKLAYILRRLREIPHIEFVRI 285

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +++P V PQRI PEL+  ++    PV++++H  HP E + E+  A  RLA+AGI L SQ
Sbjct: 286 GTKMPAVLPQRITPELVNAIRPY-HPVWMSLHFLHPDECTPESKQACERLADAGIPLGSQ 344

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+ND+ E +  L    +  R++PYYL+  D  +G++HFR ++ +G +I++ L+  
Sbjct: 345 TVLLKGVNDNVETMKQLTHKLLMNRVRPYYLYQCDPISGSAHFRTSVAKGLEIISGLRGH 404

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            +G   P Y++D PGG GK+ +    +    +G   + +    +  YP   +
Sbjct: 405 TTGYAVPTYVIDAPGGGGKIPLQPDAVVGREDGHLVLRNFEGKLFRYPDPDA 456


>gi|289432513|ref|YP_003462386.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
 gi|288946233|gb|ADC73930.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT]
          Length = 439

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 127/344 (36%), Positives = 192/344 (55%), Gaps = 3/344 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q +++ +TS  ++     +  E+  ++  +S  + ++ TP   +L++  N NDP+  Q 
Sbjct: 59  WQFKNR-VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQL 117

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL        DP+ + + S + G+VHRYPDR+++ L  +CPV CR C R+     
Sbjct: 118 IPDTAELCFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             G V +  + +A LAYI++   I +VI +GGDPL LS  RL+ VL  LR I HV+I+R 
Sbjct: 177 NGGWVHTQAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRI 236

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI+ EL   L + G P+++  H NHP E ++E+  A  RL  AG+ + +Q
Sbjct: 237 GTRYPVVLPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQ 295

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKGIND   +   L    +  +++PYYL   D   GT HF   IE G  I+  L+  
Sbjct: 296 SVLLKGINDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGY 355

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            SGL  P Y++DLPGG GK+ I    +       Y I ++   +
Sbjct: 356 TSGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGEI 399


>gi|147669246|ref|YP_001214064.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
 gi|146270194|gb|ABQ17186.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1]
          Length = 439

 Score =  458 bits (1178), Expect = e-127,   Method: Composition-based stats.
 Identities = 127/344 (36%), Positives = 192/344 (55%), Gaps = 3/344 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q +++ +TS  ++     +  E+  ++  +S  + ++ TP   +L++  N NDP+  Q 
Sbjct: 59  WQFKNR-VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQL 117

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL        DP+ + + S + G+VHRYPDR+++ L  +CPV CR C R+     
Sbjct: 118 IPDTAELCFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             G V +  + +A LAYI++   I +VI +GGDPL LS  RL+ VL  LR I HV+I+R 
Sbjct: 177 NGGWVHTQAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRI 236

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI+ EL   L + G P+++  H NHP E ++E+  A  RL  AG+ + +Q
Sbjct: 237 GTRYPVVLPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQ 295

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKGIND   +   L    +  +++PYYL   D   GT HF   IE G  I+  L+  
Sbjct: 296 SVLLKGINDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGY 355

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            SGL  P Y++DLPGG GK+ I    +       Y I ++   +
Sbjct: 356 TSGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGEI 399


>gi|299133809|ref|ZP_07027003.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2]
 gi|298591645|gb|EFI51846.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2]
          Length = 357

 Score =  457 bits (1177), Expect = e-126,   Method: Composition-based stats.
 Identities = 179/348 (51%), Positives = 243/348 (69%), Gaps = 4/348 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L +  L+ +E +  ++ ++  Y+IA+TP +A LI+P++PNDPIARQ++P  +E
Sbjct: 10  TLRRPAELADQKLVSREALPALEAVAARYAIAITPAVAALIDPNDPNDPIARQYVPSTQE 69

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L I P ER DPIGDN  SP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K + L
Sbjct: 70  LQIEPVERVDPIGDNARSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKDSAL 129

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S      A+ YI+   +IWEVI TGGDPL+LS +RL++++  L  I HV+I+RFH+RVP+
Sbjct: 130 SDHAYAKAIDYIRTHPEIWEVILTGGDPLMLSTRRLKEIVNDLAAIPHVKIIRFHTRVPV 189

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP R+  E+ + L       ++A+HANHP E + EA AA +RL + GI ++SQSVLL+G
Sbjct: 190 ADPARMTDEVAEALHHPDVTTWVALHANHPRELTAEARAACARLIDRGIPMVSQSVLLRG 249

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  E L  LMR FVE RIKPYYLHH DLA GTSH R T+EEG+ ++  L+  +SGLCQ
Sbjct: 250 VNDTAETLTALMRAFVECRIKPYYLHHGDLAPGTSHLRTTLEEGEALMRQLRGHVSGLCQ 309

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGS----YCITDHHNIVHDYPPK 350
           P Y+LD+PGGYGK+ +    + +  +G       + D+   VH YPP 
Sbjct: 310 PDYVLDIPGGYGKIPVGPAYLSQQRDGERMQPRRLVDYCGGVHSYPPA 357


>gi|302392039|ref|YP_003827859.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501]
 gi|302204116|gb|ADL12794.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501]
          Length = 401

 Score =  456 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 131/347 (37%), Positives = 207/347 (59%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL++ ++T+A +L     I  +Q +EIKE +  + +++TP  A+LI+  +   PI  Q 
Sbjct: 22  WQLKN-SITTADELQQYFDIDDQQAEEIKEAAKIFPMSITPYYASLIDFDDELCPIKLQA 80

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +PQKEEL     E EDP+ +   SP+ G+ HRYPDR+LL + + C ++CR C R+  VG 
Sbjct: 81  VPQKEELEEYEYEMEDPLHEEEDSPVPGLTHRYPDRVLLMVTNYCSMFCRHCTRKRKVGD 140

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T       +A + YI+   Q+ +V+ +GGDPL+L   +L+K++  L+ I HV+I+R 
Sbjct: 141 GN-TQDDFDQIQAGIEYIKNNPQVRDVLLSGGDPLLLDLDKLEKIIARLKEIPHVEIVRL 199

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SRVP+V PQRI+ ELI  LK+   P++I  H NH  E +  +  A+++LA+ G  L +Q
Sbjct: 200 GSRVPVVLPQRIDDELIARLKKYS-PLWINTHFNHKKEITSRSKKALAKLADNGFPLGNQ 258

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+ IND P ++ +LM   V  R++PYYL+  DL+ G  HFR +I  G +I+ SL   
Sbjct: 259 TVLLRNINDSPAVMEDLMHKLVANRVRPYYLYQCDLSRGIEHFRTSISTGIEIIESLIGH 318

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P Y++D PGG GK+ I  + +    +    + ++   +  Y
Sbjct: 319 TSGFAVPRYVVDAPGGGGKIPISPNYVISSSSQKTILRNYEGDIVAY 365


>gi|209885154|ref|YP_002289011.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans
           OM5]
 gi|209873350|gb|ACI93146.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans
           OM5]
          Length = 357

 Score =  456 bits (1175), Expect = e-126,   Method: Composition-based stats.
 Identities = 177/347 (51%), Positives = 240/347 (69%), Gaps = 3/347 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L   NL+ ++ +  ++ ++  Y+IA+TP +A LI+P++PNDPIARQ++P  +E
Sbjct: 11  TLRQPAELAAHNLVSQDALQGLEAVAKRYAIAITPAVAELIDPNDPNDPIARQYVPSPQE 70

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     ER DPIGD  HSP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K T L
Sbjct: 71  LQSETIERVDPIGDRAHSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKETAL 130

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S      A+ YI+   +IWEVI TGGDPL+LS +RL+++   L  I HV+I+RFH+RVPI
Sbjct: 131 SDAAYTKAIDYIRTHPEIWEVILTGGDPLMLSARRLKEITADLAAIPHVRIVRFHTRVPI 190

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP+R+  E+   L+      ++A+HANHP E +  A AA +RL + GI L+SQSVLL+G
Sbjct: 191 ADPERVTDEVADALRHPDVTTWVAVHANHPRELTPTARAACARLIDRGIPLVSQSVLLRG 250

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  E L  LMR FVE RIKPYYLHH DLA GT+H R ++EEG+ ++  L+  +SGLCQ
Sbjct: 251 VNDTVETLTALMRAFVECRIKPYYLHHGDLAPGTAHLRTSLEEGEALMRKLRGYVSGLCQ 310

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350
           P Y+LD+PGG+GK+ +    +   G G      + D+   VH YPP+
Sbjct: 311 PDYVLDIPGGFGKIPVGPVYLSPEGAGPTQRRRLLDYCGEVHVYPPE 357


>gi|169830385|ref|YP_001716367.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169637229|gb|ACA58735.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 420

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 132/347 (38%), Positives = 206/347 (59%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL ++ +T+  +L N   +  E+   ++       +A+TP  A+L++P NP DPI +Q 
Sbjct: 24  WQLANR-VTTVDELRNLINLTPEEEQGVRRCLETLRMAITPYYASLMDPDNPEDPIRKQA 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL     E  DP+ +   SP+ GI HRYPDR+LL L   C +YCR C RR + G 
Sbjct: 83  VPLAAELQFGLAESRDPLAEEVDSPVPGITHRYPDRVLLLLTDQCAMYCRHCTRRRLAG- 141

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +    L     +AAL YI++ + I +V+ +GGD L+L+  RL  +L++LR I HV+I+R 
Sbjct: 142 KTDRALPPARIKAALEYIRKTTAIRDVLLSGGDSLLLAEDRLGGILESLRAIDHVEIIRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI PEL   L+    PVY+ +H NHP E + EA  A   LA+AG+ L +Q
Sbjct: 202 GTRTPVVLPQRITPELCALLRRF-HPVYVNMHFNHPKEVTPEAAEACRMLADAGLPLANQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+ND P ++ +LM + + +R++PYYL+  DL+ G  HFR T+ +G +I+  L+  
Sbjct: 261 TVLLRGVNDCPYVIKDLMHSLLRIRVRPYYLYQCDLSPGLEHFRTTVAQGIEIIELLRGH 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P Y++D PGG GK+ +    +         + ++  ++  Y
Sbjct: 321 TSGLAVPTYVVDAPGGGGKIPVAPQYMISQSERMVILRNYEGVITAY 367


>gi|73748466|ref|YP_307705.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
 gi|73660182|emb|CAI82789.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1]
          Length = 439

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 127/344 (36%), Positives = 192/344 (55%), Gaps = 3/344 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q +++ +TS  ++     +  E+  ++  +S  + ++ TP   +L++  N NDP+  Q 
Sbjct: 59  WQFKNR-VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQL 117

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL        DP+ + + S + G+VHRYPDR+++ L  +CPV CR C R+     
Sbjct: 118 IPDTAELCFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             G V +  + +A LAYI++   I +VI +GGDPL LS  RL+ VL  LR I HV+I+R 
Sbjct: 177 NGGWVHTQAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSISHVEIIRI 236

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI+ EL   L + G P+++  H NHP E ++E+  A  RL  AG+ + +Q
Sbjct: 237 GTRYPVVLPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQ 295

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKGIND   +   L    +  +++PYYL   D   GT HF   IE G  I+  L+  
Sbjct: 296 SVLLKGINDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGY 355

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            SGL  P Y++DLPGG GK+ I    +       Y I ++   +
Sbjct: 356 TSGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGEI 399


>gi|255994192|ref|ZP_05427327.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989]
 gi|255993860|gb|EEU03949.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989]
          Length = 426

 Score =  456 bits (1174), Expect = e-126,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 204/347 (58%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ L +A ++     + +++  +I +I + + + +TP  A+L++ ++P  P+  Q 
Sbjct: 33  WQVANR-LGTADEIAEVINLTEQEKADITKILDGFRVGITPYYASLMDENDPMCPVRMQA 91

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E +    +  DP+ ++  SP  G+ HRYPDR+L  +   C +YCR C RR + G 
Sbjct: 92  VPTILEAHRSEADLLDPLHEDEDSPAPGLTHRYPDRVLFLVTDQCSMYCRHCTRRRLAG- 150

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +     S +D +A +AYI++  Q+ +V+ +GGD L++    L+ V+K LR I HV+++R 
Sbjct: 151 ETDGARSIEDIDACIAYIKKTPQVRDVLLSGGDALLIDDDVLEYVIKNLRDIPHVEVVRI 210

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+V PQRI PEL++ L++   PV++  H NH  E ++ + AA++ LA+AGI L +Q
Sbjct: 211 GSRTPVVCPQRITPELVKMLRKY-HPVWLNTHFNHKREVTDTSRAALALLADAGIPLGNQ 269

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND P  +  L+   V+ R++PYY++  DL+ G  HFR  + +G +I+  L+  
Sbjct: 270 SVLLRGLNDCPHKMRELVHEMVKNRVRPYYIYQCDLSLGIEHFRTPVSKGIEIIEGLRGH 329

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P +++D PGG GK  +    +         + ++  ++  Y
Sbjct: 330 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQTPHKVILRNYEGVITTY 376


>gi|57234545|ref|YP_181370.1| radical SAM domain-containing protein [Dehalococcoides ethenogenes
           195]
 gi|57224993|gb|AAW40050.1| radical SAM domain protein [Dehalococcoides ethenogenes 195]
          Length = 439

 Score =  456 bits (1173), Expect = e-126,   Method: Composition-based stats.
 Identities = 128/344 (37%), Positives = 195/344 (56%), Gaps = 3/344 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q +++ +TS  ++     +  E+  +++ +S  + ++ TP   +L++  N NDP+  Q 
Sbjct: 59  WQFKNR-VTSVTEIARFFHLSAEEYRDMEAVSAVFPLSATPYYLSLVDFDNVNDPVKCQL 117

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   ELN       DP+ + + S + G+VHRYPDR+++ L  +CPV CR C R+     
Sbjct: 118 MPDTAELNFDTRCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             G V +  + +A LAYI++   I +VI +GGDPL LS  RL+ VL  LR I HV+I+R 
Sbjct: 177 NGGWVHTQAEIDAMLAYIRQHQVIRDVIISGGDPLTLSTPRLESVLSALRSIPHVEIIRI 236

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+V PQRI+ EL   L + G P+++  H NHP E +EE+  A  RL  AG+ + +Q
Sbjct: 237 GTRYPVVLPQRIDDELCNMLSKYG-PIWLNTHYNHPNEITEESRQACDRLVRAGVPVNNQ 295

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKGIND   +  +L    +  +++PYYL   D   GT HF   IE G  I+  L+  
Sbjct: 296 SVLLKGINDSVSVQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGY 355

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            SGL  P Y++DLPGG GK+ I    +       Y I ++   +
Sbjct: 356 TSGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGDI 399


>gi|254463955|ref|ZP_05077366.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales
           bacterium Y4I]
 gi|206684863|gb|EDZ45345.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales
           bacterium Y4I]
          Length = 360

 Score =  455 bits (1172), Expect = e-126,   Method: Composition-based stats.
 Identities = 119/351 (33%), Positives = 197/351 (56%), Gaps = 3/351 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           +R++ + S + L     +   + + +        + +TP  A+L+   +P++P+ R  IP
Sbjct: 1   MRNR-IRSQEALSRIFDLSDGEQEALARHQGGLPVGITPYYASLMGLDDPDEPLRRTHIP 59

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
             +E   LP E  DP+G+++ +P+ G+VHRYPDR+L      C  YCR+C R  MVG   
Sbjct: 60  VGQEYLQLPGEAGDPLGEDHDTPVPGLVHRYPDRVLFLATGTCSTYCRYCTRSRMVGQAG 119

Query: 123 GTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           G    S    + AL YI    ++ +V+ +GGDPL ++  +L  +L  LR I HV+ +R  
Sbjct: 120 GEYQFSVSQWDRALDYIAAHPEVRDVLLSGGDPLTIADDKLDYLLGRLRAIPHVEFIRLG 179

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +++PIV P R+  +L++ LK    P++++IH  HP E + EA  A  RLA+AGI L SQ+
Sbjct: 180 AKMPIVLPMRVTRDLVRMLKRH-HPLWMSIHVTHPAELTPEATEACKRLADAGIPLGSQT 238

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKGIND  +IL  + +  +  R++PYYL+  D   G++HFR  + +G +I+  L+   
Sbjct: 239 VLLKGINDSVDILKPMYQALLMRRVRPYYLYQCDPITGSAHFRTPVAKGLEIIEGLRGHT 298

Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           +G   P +++D PGG GK+ +    +         + +  NI++ YP    
Sbjct: 299 TGYAVPQFVIDAPGGGGKIPLLPDYVAGRDGSDLILRNFENILYRYPDPGG 349


>gi|217976642|ref|YP_002360789.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris
           BL2]
 gi|217502018|gb|ACK49427.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris
           BL2]
          Length = 363

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 192/349 (55%), Positives = 250/349 (71%), Gaps = 1/349 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           LR KTL SA DL  A L    +  EI+ +   Y IA+TP IA LI+   PNDPIARQF+P
Sbjct: 13  LRAKTLRSADDLVEAGLASARRRAEIESVGETYPIAVTPAIAALIDRDAPNDPIARQFVP 72

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              EL+  PE+  DPIGD  +SP++G+VHRYPDR+LLKLL VCPVYCRFCFRR+MVG  K
Sbjct: 73  DIAELSPRPEDLADPIGDEAYSPVEGVVHRYPDRVLLKLLLVCPVYCRFCFRRDMVGPGK 132

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
              LS +  +AALAYI    +IWEVI TGGDP  LS +RL ++++ L  I+HV+I+R H+
Sbjct: 133 SAHLSPEALDAALAYIAADPRIWEVILTGGDPFALSPRRLAEIMERLAAIEHVRIVRVHT 192

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           RVP VDP  I+  LI  LK++GK +Y+A+HANHP E + EA AA +RL +AGI ++SQSV
Sbjct: 193 RVPCVDPDAIDAALIAALKKSGKTIYVALHANHPRELTSEARAACARLIDAGIPMVSQSV 252

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LL G+NDD E L+ LMR FVE R+KPYYLHH DLA G +HFR+ IE+G++++  L+ ++S
Sbjct: 253 LLAGVNDDVETLSALMRGFVEARVKPYYLHHLDLAPGVAHFRVDIEKGRELMQQLRGRLS 312

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVG-NGSYCITDHHNIVHDYPPK 350
           GLCQP Y+LD+PGG+GK  I    I+  G NG + + D+    H YPP+
Sbjct: 313 GLCQPAYMLDVPGGHGKSPIGPDFIEPAGANGVFRVRDYQGATHLYPPQ 361


>gi|78358081|ref|YP_389530.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220486|gb|ABB39835.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 527

 Score =  455 bits (1171), Expect = e-126,   Method: Composition-based stats.
 Identities = 124/351 (35%), Positives = 199/351 (56%), Gaps = 4/351 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q  ++ +TS   L     + +E+            +A+TP  A   +PHNP  P+ R  
Sbjct: 156 WQYANR-ITSLGVLGTMLGLSEEE-AGAGTGLAALPLAVTPYYAAQFDPHNPAHPLRRTM 213

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE ++ P E  DP+G+++HSP+ G+VHRYPDR+L      C  YCR+C R   VG 
Sbjct: 214 VPTVEEWSLNPGESADPLGEDSHSPVPGLVHRYPDRVLFLATDSCSAYCRYCTRSRRVGK 273

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                 S +   AA+ YI+   ++ +V+ +GGDPL ++   L  +L  LR I HV+ +R 
Sbjct: 274 PCAGSASRRRWPAAIEYIENHPEVRDVLISGGDPLTMTDSALNHLLSQLRRIPHVEFIRI 333

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            ++ PIV PQRI P L++ L+    P++++IH  HP E + EA  A++RLA+ GI L SQ
Sbjct: 334 GTKAPIVMPQRITPALVRMLRRY-HPLFMSIHCTHPDELTPEASQALNRLADGGIPLGSQ 392

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGIND+   +  LM+  ++ R++PYYL+H D   G++HFR  I +G +I+  ++  
Sbjct: 393 TVLLKGINDNVPTMTALMQGLLKNRVRPYYLYHCDPVQGSAHFRTPIYKGVEIIRGMRGF 452

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH-DYPPK 350
            +G   P Y++D PGG GK+ +    ++        + ++   ++  Y P 
Sbjct: 453 TTGYAVPTYVVDAPGGGGKIPLMPDYVQGYDGEELVMRNYEGGLYRSYDPA 503


>gi|15964028|ref|NP_384381.1| hypothetical protein SMc00355 [Sinorhizobium meliloti 1021]
 gi|307301174|ref|ZP_07580936.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
           BL225C]
 gi|307321075|ref|ZP_07600480.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
           AK83]
 gi|15073204|emb|CAC41712.1| Lysine 2,3-aminomutase [Sinorhizobium meliloti 1021]
 gi|306893247|gb|EFN24028.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
           AK83]
 gi|306903630|gb|EFN34217.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
           BL225C]
          Length = 350

 Score =  454 bits (1169), Expect = e-126,   Method: Composition-based stats.
 Identities = 199/346 (57%), Positives = 264/346 (76%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + + +A++L +A L+ +EQ + I  +++ Y++A++P IA L++  +PNDPIARQF+P   
Sbjct: 5   RAIRTARELADAGLVGREQEEAISRVASRYAVAISPTIARLVDRDDPNDPIARQFVPDMA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL ++PEER DPIGD  HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG +    
Sbjct: 65  ELTLMPEERADPIGDGAHSPVAGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+  + +AALAYI  + +IWEVI TGGDPL+LS +RL  ++  L  I HV+++RFH+RVP
Sbjct: 125 LTPAELDAALAYIAGRPEIWEVILTGGDPLVLSPRRLGDIMVRLAEIDHVKVVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V+P R++  LI  LK +GK  Y+A+HANHP E + EA AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVEPDRVDAGLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP++LA LMR FVE RIKPYYLHHPDLA GT HFRL+IEEGQ +VASL+ ++SGLC
Sbjct: 245 GVNDDPDVLAALMRAFVETRIKPYYLHHPDLAPGTGHFRLSIEEGQALVASLRGRVSGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGG+GK  +    I+  G G Y +TD     HDYPPK 
Sbjct: 305 QPAYILDIPGGHGKAVVSAGAIEAEGGGCYTVTDFRGNRHDYPPKG 350


>gi|150398662|ref|YP_001329129.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae
           WSM419]
 gi|150030177|gb|ABR62294.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae
           WSM419]
          Length = 350

 Score =  454 bits (1169), Expect = e-125,   Method: Composition-based stats.
 Identities = 195/346 (56%), Positives = 264/346 (76%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +T+ + +DL  A LI +E+ + I  ++  Y++A++P I+ L++  +P+DPIARQF+P   
Sbjct: 5   RTIRTPRDLVEAGLIGREREEAISRVTASYAVAISPAISRLVDRDDPDDPIARQFVPDMA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL ++PEER DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG +    
Sbjct: 65  ELAVMPEERADPIGDSTHSPVTGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+  + + A+AYI    +IWEVI TGGDPL+LS +RL ++++ L  I+HV+++RFH+RVP
Sbjct: 125 LTPAELDRAIAYISGHQEIWEVILTGGDPLVLSPRRLGEIMERLAKIEHVKVVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V+P R++  LI  LK +GK  Y+A+HANHP E +  A AA +RL +AGI+++SQSVLLK
Sbjct: 185 VVEPDRVDAPLIAALKGSGKATYVALHANHPRELTVAARAAAARLIDAGIVMVSQSVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP+ILA LMR FVE R+KPYYLHHPDLA GTSHFRL+IEEGQ +VASL+ ++SGLC
Sbjct: 245 GVNDDPDILAELMRAFVETRVKPYYLHHPDLAPGTSHFRLSIEEGQALVASLRGRVSGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP YILD+PGG+GK  +   +I+  G G Y +TD     H YPPK 
Sbjct: 305 QPAYILDIPGGHGKSVVSASSIEAEGGGCYTVTDFRGNRHAYPPKG 350


>gi|300088094|ref|YP_003758616.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527827|gb|ADJ26295.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 431

 Score =  453 bits (1166), Expect = e-125,   Method: Composition-based stats.
 Identities = 126/344 (36%), Positives = 198/344 (57%), Gaps = 4/344 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH+ +T+ ++L     +   +   IK ++  + +A+TP   +LINP +  DPI RQ 
Sbjct: 51  WQFRHR-ITTVEELSRYLPLSVRERTRIKLVTAEFPMAITPYYLSLINPADAKDPIRRQA 109

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL      REDP+ +++HS + G+VHRYPDR L+ L  +CP+ CR C R+     
Sbjct: 110 VPSVHELTGEAG-REDPLEEHSHSVVPGLVHRYPDRALMVLTDICPMLCRHCTRKREW-R 167

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           + G V +S   +A + YI    Q+ ++I +GGDPL LS +RL++VL  LR I HV+I+R 
Sbjct: 168 KGGWVQNSTRVKAMVDYIGRTPQVRDIIISGGDPLTLSTRRLEEVLAALRAIPHVEIIRI 227

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R+P+V PQRI+ EL + L +   P+++  H NHP E + EA AA  RL  AG+ + +Q
Sbjct: 228 GTRLPVVLPQRIDVELCRMLSKYS-PIWVNTHFNHPGEITPEAAAACDRLLRAGVQVNNQ 286

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND      NL  + +   ++PYYL   D   GT H    +E G +I+  ++  
Sbjct: 287 SVLLRGVNDTVATQLNLCHSLLRAMVRPYYLFQCDQVRGTEHLWTPVETGLRIIEGMRGH 346

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            SGL  P Y++DLP G GK+ +  + +         + ++   +
Sbjct: 347 TSGLAIPNYVIDLPDGRGKIPLSPNYVISHTKHELTVRNYEGHI 390


>gi|170738726|ref|YP_001767381.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp.
           4-46]
 gi|168193000|gb|ACA14947.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp.
           4-46]
          Length = 356

 Score =  451 bits (1160), Expect = e-125,   Method: Composition-based stats.
 Identities = 178/349 (51%), Positives = 244/349 (69%), Gaps = 3/349 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           +  +TL     L  A L+ +  +  ++ +++ Y++A+TP +A+LI    P D I RQF+P
Sbjct: 1   MSRRTLRDPASLVEAGLVPRAALPALERVASRYAVAVTPAMADLIET--PEDGIGRQFLP 58

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
           + EEL+  P ER DPIGD  H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG   
Sbjct: 59  RAEELDAAPGERADPIGDAAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPDG 118

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
              LS    +AALAY+  + +IWEV+ TGGDP +LS +RL+++   L    HV++LR H+
Sbjct: 119 MGALSEAQLDAALAYVAARPEIWEVVVTGGDPFLLSPRRLERIGAALAATDHVRVLRLHT 178

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           RVP V+P+R++  L+  LK  G+ V++A+HANHP EF+  A AAI+RL +AGI L+SQSV
Sbjct: 179 RVPAVEPERVDAALVAALKRFGRAVFVALHANHPGEFTPAARAAIARLVDAGIPLVSQSV 238

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LL+G+NDDPE LA LMR FVE R+KPYYLHH DLA GT HFR ++  GQ ++  L+ ++S
Sbjct: 239 LLRGVNDDPETLAALMRAFVENRVKPYYLHHGDLAPGTGHFRTSLPVGQALMRGLRGRVS 298

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           GLCQP Y+LD+PGG+GKV +    ++    G + +TD     H YPP+ 
Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPAYLEPR-PGGFTVTDPEGRAHAYPPEG 346


>gi|222106966|ref|YP_002547757.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4]
 gi|221738145|gb|ACM39041.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4]
          Length = 349

 Score =  451 bits (1160), Expect = e-124,   Method: Composition-based stats.
 Identities = 193/342 (56%), Positives = 252/342 (73%), Gaps = 1/342 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           KT+ + ++L    L+  E   E+  ++  Y+IA+TP +  LI+P++P DPIA QF+PQ  
Sbjct: 6   KTVKTVRELVETGLVAAETGPELDAVAARYAIAITPAMLALIDPNDPTDPIAAQFVPQAG 65

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P ER DPIGD+ HSP++GIVHRYPDR+LLK++H CPVYCRFCFRREMVG     +
Sbjct: 66  ELVHQPVERADPIGDHAHSPVEGIVHRYPDRVLLKVVHSCPVYCRFCFRREMVGPDGDGL 125

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS    +AA+ YI++   IWEVIFTGGDPL+LS +RL+ +L+ L  I HV+I+RFHSRVP
Sbjct: 126 LSGPALDAAITYIRDHKDIWEVIFTGGDPLVLSPRRLRSILQQLGTIDHVRIIRFHSRVP 185

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP RI+ +LI  L+ +GK  YIAIHANHP E + +A AA ++L  AG  LLSQ+VLLK
Sbjct: 186 VADPARIDKDLIDALQASGKTTYIAIHANHPRELTPQARAASAKLLQAGFALLSQTVLLK 245

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDD  +LA+LMR+FV++RI+PYYLHHPDLA GT HFRL+I EGQ IV++L   +SGLC
Sbjct: 246 GVNDDAGVLADLMRSFVDMRIRPYYLHHPDLAPGTGHFRLSIAEGQAIVSALHGHLSGLC 305

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           QP Y+LD+PGG+GK  ID   I K G+  Y +TD H   H Y
Sbjct: 306 QPTYVLDIPGGHGKAPIDASQISKEGD-HYLVTDFHGHHHIY 346


>gi|260893262|ref|YP_003239359.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4]
 gi|260865403|gb|ACX52509.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4]
          Length = 427

 Score =  450 bits (1159), Expect = e-124,   Method: Composition-based stats.
 Identities = 123/348 (35%), Positives = 195/348 (56%), Gaps = 5/348 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
             L+++ +TS + L     + +E+ + I+++   Y  A++P   +L+   +P+ PI RQ 
Sbjct: 74  WHLKNR-ITSVEVLEKLIPLTQEEKEAIRQVERVYRWAVSPYYLSLM-GEDPSCPIRRQA 131

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL        DP+ +   SP  GI  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 132 LPSAAELEDEVG-SLDPMAEEWTSPAPGITRRYPDRLIINVTNRCAMYCRHCQRRRNIG- 189

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +     +  + E AL YI++  +I +V+ TGGD L+LS   L  +L  L  I HV+I R 
Sbjct: 190 EVDRDRTRWELEEALEYIRQNKEIRDVLLTGGDALLLSDSVLDWLLTELDRIPHVEIKRI 249

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  PQRI   L + L +   P+Y+    NHP E ++EA AA  RLA AG++L +Q
Sbjct: 250 GTRVPVTLPQRITDNLCRILAKHP-PIYLNTQFNHPREITKEAKAACDRLAEAGVVLGNQ 308

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+N+ P I+  L +  +++R++PYYL    L  GT+HF   IEEG +I+  L+  
Sbjct: 309 AVLLRGVNNHPFIMRKLNQELLKIRVRPYYLFQAKLVKGTTHFVTPIEEGIEIMEYLRGY 368

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SGL  P YI++ P G GK+ I    +  +      +    N +  YP
Sbjct: 369 TSGLAVPTYIINAPQGLGKIPILPQYLLAIDEDHVVLRTWENKIVRYP 416


>gi|220921877|ref|YP_002497178.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           nodulans ORS 2060]
 gi|219946483|gb|ACL56875.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           nodulans ORS 2060]
          Length = 356

 Score =  449 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 178/348 (51%), Positives = 244/348 (70%), Gaps = 3/348 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           +  +TL     L  A L+   ++ E++ ++  Y++A+TP +A LI    P D I RQF+P
Sbjct: 1   MSRRTLRDPAALAAAGLVPAARLPELERVAARYAVAVTPDMAELI--EAPEDGIGRQFLP 58

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
             EEL+  P ER DPIGDN H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG + 
Sbjct: 59  SAEELDTAPGERADPIGDNAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPKG 118

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
              L   + +AALAYI  + +IWEV+ TGGDP +L+ +RL+++   L  ++HV++LR H+
Sbjct: 119 VGSLGEAELDAALAYIAARPEIWEVVVTGGDPFLLAPRRLERIAAALGGMEHVRVLRLHT 178

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           RVP+VDP R++  L+  LK  G+ V++A+HANHP EF+  + AA++RL +AGI L+SQSV
Sbjct: 179 RVPVVDPARVDAALVAALKAFGRAVFVALHANHPREFTPASRAALARLVDAGIPLVSQSV 238

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LL+G+NDD E L  LMR FVE R+KPYYLHH DLA GT HFR  + EGQ ++  L+ ++S
Sbjct: 239 LLRGVNDDAETLGLLMRAFVENRVKPYYLHHGDLAPGTGHFRTGLAEGQALMRILRGRVS 298

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           GLCQP Y+LD+PGG+GKV +    +   G G + +TD     H YPP+
Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPGYLAPRGAG-WTVTDPDGREHAYPPE 345


>gi|86750071|ref|YP_486567.1| hypothetical protein RPB_2954 [Rhodopseudomonas palustris HaA2]
 gi|86573099|gb|ABD07656.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris HaA2]
          Length = 363

 Score =  449 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 185/349 (53%), Positives = 250/349 (71%), Gaps = 4/349 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L    L   E  D++++++  Y+IA+TP +A LI+P++P+DPIARQ+IP+ +E
Sbjct: 14  TLRQPSELIAQGLAPAESRDDLEQVAARYAIAVTPDVAALIDPNDPHDPIARQYIPRADE 73

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L  LP ER+DPIGD  H+P++GIVHR+ DR+LLKL+HVC VYCRFCFRRE +G  K   L
Sbjct: 74  LVTLPIERDDPIGDGAHAPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRRETIGPGKDNAL 133

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S + T AAL YI+   +IWEVIFTGGDPL+LS +R+ +++  L  I HV+I+RFH+RVP+
Sbjct: 134 SREATAAALDYIRAHPEIWEVIFTGGDPLMLSPRRMAEIMAELATIAHVKIIRFHTRVPV 193

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP RI PEL++ L+  GK  ++A+HANHP E +  A AA + L +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPELVRALQTPGKTTWVALHANHPRELTAAARAACAMLIDAGIPMVSQSVLLRG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD E L  LMR FVE RIKPYYLHH DLA GT+H R TI EGQ ++ +L+ ++SGLCQ
Sbjct: 254 VNDDSETLEALMRGFVECRIKPYYLHHGDLAPGTAHLRTTIAEGQALMRALRGRVSGLCQ 313

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGGYGK  I  + +        +  Y + D+   VH YPP S
Sbjct: 314 PEYVLDIPGGYGKAPIGPNYLTGEDGTVADSRYRVRDYCGDVHLYPPGS 362


>gi|209965785|ref|YP_002298700.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW]
 gi|209959251|gb|ACI99887.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW]
          Length = 353

 Score =  449 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 175/343 (51%), Positives = 236/343 (68%), Gaps = 2/343 (0%)

Query: 6   KTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
           +TL S   L +A L+  + ++  ++ ++  +++A+TP +A L++P +P DP+ARQF+P  
Sbjct: 10  RTLRSPGALADAGLLPDDGRLPALEAVARRFAVAVTPAVAELVDPTDPADPVARQFLPDP 69

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            EL   PEE  DPIGD   SP+KGIVHRY DR+LLK +H CPVYCRFCFRREMVG    T
Sbjct: 70  AELETRPEELADPIGDAPFSPVKGIVHRYRDRVLLKPVHTCPVYCRFCFRREMVGPGAET 129

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            L   D +AAL YI  + +IWEVI TGGDPLILS +RL +++  L  I HV I+R HSRV
Sbjct: 130 -LDGADLDAALDYIAARPEIWEVILTGGDPLILSPRRLAEIVARLDAIPHVGIVRLHSRV 188

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+VDP+R+  EL+  L+      ++ +HANH  E +EEA AAI+RL +AGI +LSQSVLL
Sbjct: 189 PVVDPERVTAELVAALRGRRLTTWVMLHANHWKELTEEARAAIARLVDAGIPMLSQSVLL 248

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           KG+NDD E LA   R  V  R+KP+YLH  DLA GT+HFR T+ EGQ ++ +L+  +SGL
Sbjct: 249 KGVNDDVETLARTFRALVAARVKPHYLHQGDLAKGTAHFRTTVAEGQALMRALRGDVSGL 308

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           CQP Y+LD+PGG+GKV +   + +  G G + +TD     H Y
Sbjct: 309 CQPTYVLDIPGGHGKVPLTPTHAEPDGAGGWTVTDPRGGRHPY 351


>gi|154247831|ref|YP_001418789.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter
           autotrophicus Py2]
 gi|154161916|gb|ABS69132.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter
           autotrophicus Py2]
          Length = 362

 Score =  449 bits (1157), Expect = e-124,   Method: Composition-based stats.
 Identities = 172/344 (50%), Positives = 233/344 (67%), Gaps = 1/344 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL S  DL  A L      D +  ++  Y++A+TP + + I+  +P DPIARQF+P   E
Sbjct: 19  TLRSGDDLVAAGLADARDRDALARVAERYAVAVTPTLVDAIDRTDPADPIARQFVPHPAE 78

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L + PEE  DPIGD  HSP+ GIVHRY DR LLK++ VC VYCRFCFRREMVG      L
Sbjct: 79  LEVRPEELADPIGDEAHSPVPGIVHRYRDRALLKIVGVCAVYCRFCFRREMVGPGAAATL 138

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S +  E A AY+    +IWEVI TGGDP +LS +R+ +V+  L  I HV+I+RFH+RVPI
Sbjct: 139 SPEALERAFAYLSAHPEIWEVILTGGDPFMLSPRRMGEVMARLAAIAHVKIVRFHTRVPI 198

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
             P+R++  LI  LK  G   Y+A+H NH  E + +A +A++R+A+AGI LLSQSVLL+G
Sbjct: 199 AAPERVSDALIAALKAPGLTSYVAVHVNHARELTPDARSALARMADAGIPLLSQSVLLRG 258

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LA L R+ VE R+KPYYLHHPDLA GT+HFRL I  GQ+++ +L+ ++SG+  
Sbjct: 259 VNDEADTLAALFRSLVECRVKPYYLHHPDLAPGTAHFRLDIARGQELMRALRGRLSGIAL 318

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           P Y+LD+PGG GKV +   +I   G     ++D+   VH YPP+
Sbjct: 319 PTYVLDIPGGAGKVPLTPGHIAPAGT-RLAVSDNCGGVHLYPPE 361


>gi|192291173|ref|YP_001991778.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
           palustris TIE-1]
 gi|192284922|gb|ACF01303.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
           palustris TIE-1]
          Length = 363

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 180/349 (51%), Positives = 246/349 (70%), Gaps = 4/349 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L    L   +    + E++  Y+IA+TP +A LI+  +P+DPIARQ+IP+ EE
Sbjct: 14  TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPRAEE 73

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+ L  ER+DPIGD  H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG  K   L
Sbjct: 74  LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S + T AAL YI+   +IWEVIFTGGDPL+LS +RL +++  L  I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP RI P+L++ L+  GK  ++A+HANHP E +E A AA +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTEAARAACARIIDAGIPMVSQSVLLRG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+  +SGLCQ
Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGGYGK  +  + +        +  Y + D+   VH YPP+S
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGADSRYRVADYCGEVHLYPPQS 362


>gi|89896773|ref|YP_520260.1| hypothetical protein DSY4027 [Desulfitobacterium hafniense Y51]
 gi|219667394|ref|YP_002457829.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium
           hafniense DCB-2]
 gi|89336221|dbj|BAE85816.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219537654|gb|ACL19393.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium
           hafniense DCB-2]
          Length = 413

 Score =  449 bits (1156), Expect = e-124,   Method: Composition-based stats.
 Identities = 133/348 (38%), Positives = 198/348 (56%), Gaps = 4/348 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +  A++L     +  +Q  EI E+   Y  A++P   +LI+  +P DPI  Q 
Sbjct: 68  WQLKNR-IQDAENLSTLLPLTPKQRHEINEVGKAYRWAVSPYYLSLIDKDDPQDPIRLQS 126

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EE+     E  DP+G+   SP   I  RYPDR+++ + ++C +YCR C RR  +G 
Sbjct: 127 LPSVEEILDDSGE-ADPMGEEYTSPAPCITRRYPDRLIINVTNLCAMYCRHCQRRRNIG- 184

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +     +  + EAAL YI+   +I +V+ TGGD L+LS + L  +L  L  IKHV+I R 
Sbjct: 185 EIDLHETRANLEAALDYIRSNPEIRDVLVTGGDALLLSDQMLDWLLGELHEIKHVEIKRI 244

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  P RI  EL   L++   P+YI    NHP E +EE   A  RL  AG+IL +Q
Sbjct: 245 GTRVPVTLPMRITDELCAILEKYP-PLYINTQFNHPQEVTEETKKAADRLIKAGVILGNQ 303

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGIND PEI+  L +  +++R++PYY+ H     GTSHF   I++G +I+ +L+  
Sbjct: 304 AVLLKGINDQPEIMKRLNQELLKIRVRPYYIFHAKNVKGTSHFIPRIQDGLRIMENLRGY 363

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SGL  P YI++ PGG GK  I    +  + +    I      V  YP
Sbjct: 364 TSGLAIPTYIINAPGGGGKTPILPQYLISLNDEEAVIRTWEGKVVHYP 411


>gi|262197122|ref|YP_003268331.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
           DSM 14365]
 gi|262080469|gb|ACY16438.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
           DSM 14365]
          Length = 419

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 125/350 (35%), Positives = 196/350 (56%), Gaps = 4/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q R+  LT+A++      +  E+   + + +  +    TP  A+L++P   + PI +Q 
Sbjct: 38  WQARN-MLTTAEEFARVVELSDEERAALVDTAPMFRTGATPYYASLMDPARADCPIRKQA 96

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP + EL+  PEE  DP+G+++ SP   +VH+YPDR+LL +L  C +YCR C RR +VG 
Sbjct: 97  IPSRRELDFAPEELRDPLGEDSQSPAPCVVHKYPDRVLLLVLDRCAIYCRHCNRRRLVGG 156

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                 +  D +A + YI    QI +V+ +GGDPL+LS+ RL  +L  LR I+HV+I+R 
Sbjct: 157 --DAPPARDDIDAGIDYIARTPQIRDVLLSGGDPLLLSNARLAHILGRLRAIEHVEIIRI 214

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R+P+V P RI+ EL   L+    P+YI  H NHP E + EA AA  RL ++GI + +Q
Sbjct: 215 GTRLPVVLPMRIDDELCATLRRF-HPLYINTHFNHPKEITSEARAACERLVDSGIPVGNQ 273

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+N     +  LMR  + +R++PYYL   D   GT H R  ++    ++  L+  
Sbjct: 274 AVLLRGVNSSVRCIRALMRALLRMRVRPYYLFQGDTVLGTDHMRTPVDAAIALMEGLRGW 333

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SG+  P  ++D PGG GK+      + +       +  +   V  YP  
Sbjct: 334 TSGMAIPHMVIDAPGGGGKLPFGPEYVLERHPDHVLVRTYRGRVVRYPEP 383


>gi|282897351|ref|ZP_06305353.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii
           D9]
 gi|281198003|gb|EFA72897.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii
           D9]
          Length = 375

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 127/347 (36%), Positives = 201/347 (57%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+RH+ LT  +       +  E+        + +++A+TP  A+L++P + N P+  Q 
Sbjct: 28  WQMRHR-LTKLEQFQKLLCLTPEEEQGFIMAVDKFAVAVTPYFASLLDPEDANCPLRLQV 86

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+KEEL +   +  DP G++N SP+ GIVHRYPDR+LL  L  C  YCR+C R  +V S
Sbjct: 87  IPRKEELIVSSGDMIDPCGEDNQSPVPGIVHRYPDRVLLLALDSCAAYCRYCTRSRLV-S 145

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q          +A + Y+++ +++ +V+ +GGDPL++S++ L  +L  LR I H++ +R 
Sbjct: 146 QGEMTPIKHRLDAMINYLEDHTEVRDVLISGGDPLLMSNQVLDSLLGRLRGISHIEFVRI 205

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SRVP   PQRI PEL++ L++    V++++H  H  E + E   A   LA+ GI L  Q
Sbjct: 206 GSRVPCFLPQRITPELVKVLRKHR--VWLSVHFCHLRELTLEVAQACDLLADGGIPLGCQ 263

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+ND  + L NL    ++LR++PYYL+  D   GTSH R +I+ G  +++ L+  
Sbjct: 264 TVLLKGVNDSEQALKNLFHGLLKLRVRPYYLYQCDPVVGTSHLRTSIQSGLDLISKLRSH 323

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            +G   P Y++D PGG GKV I    +    NG   + +  +    Y
Sbjct: 324 TTGYAIPTYVIDAPGGGGKVPIQPETLIGYENGKAIVKNWQDRSFTY 370


>gi|27379499|ref|NP_771028.1| hypothetical protein blr4388 [Bradyrhizobium japonicum USDA 110]
 gi|27352651|dbj|BAC49653.1| blr4388 [Bradyrhizobium japonicum USDA 110]
          Length = 364

 Score =  449 bits (1155), Expect = e-124,   Method: Composition-based stats.
 Identities = 171/357 (47%), Positives = 240/357 (67%), Gaps = 11/357 (3%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL    +L   +L     +  ++ ++  Y++A+TP +  LI+  +P+DPIARQF+P   
Sbjct: 8   RTLREPAELVAEHLAPAAALPALERVAARYAVAITPALVELIDTSDPDDPIARQFVPTAA 67

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL + P E  DPIGD+ HSP+ GIVHRYPDR+L KL+HVC VYCRFCFRREMVG  K   
Sbjct: 68  ELEMQPGESADPIGDHPHSPVPGIVHRYPDRVLFKLVHVCAVYCRFCFRREMVGPGKDNA 127

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS     AA+ YI+   +IWEVI TGGDPL+LS +R+ +++  L  I HV+I+R H+RVP
Sbjct: 128 LSDSAYRAAVDYIRAHDEIWEVILTGGDPLMLSPRRMSEIMADLAGIDHVKIIRLHTRVP 187

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP R++ E++  LK AG   ++A+HANH  E +E A AA +RL +AGI ++SQSVLL+
Sbjct: 188 VADPARVSDEMVAALKVAGATTWVALHANHARELTEGARAACARLVDAGIPMVSQSVLLR 247

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+   L++LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ+++  L+ ++SGLC
Sbjct: 248 GVNDNVTALSDLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQELMRQLRGRVSGLC 307

Query: 306 QPFYILDLPGGYGKVKIDTHNI-----------KKVGNGSYCITDHHNIVHDYPPKS 351
           QP Y++D+PGG GK  +  + +           +      Y I D+   VH YPP++
Sbjct: 308 QPDYVIDIPGGAGKSPVGPNYVLAAQNTAPDAREAATETRYRIVDYCGDVHLYPPET 364


>gi|182680126|ref|YP_001834272.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica
           subsp. indica ATCC 9039]
 gi|182636009|gb|ACB96783.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica
           subsp. indica ATCC 9039]
          Length = 356

 Score =  448 bits (1153), Expect = e-124,   Method: Composition-based stats.
 Identities = 188/344 (54%), Positives = 243/344 (70%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L S  DL  A LI  EQ   + E+   ++I LT ++A+LIN ++P DPIARQF+P   E
Sbjct: 12  ALRSTTDLVAAGLIPPEQERALAELEKTHAIGLTTIMADLINRNDPLDPIARQFLPDPRE 71

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
            +  PEE +DPIGD   SP++GIVHRYPDR+LLKLLH+CPVYCRFCFRRE VG      L
Sbjct: 72  ADRRPEELDDPIGDAAFSPVEGIVHRYPDRVLLKLLHICPVYCRFCFRRETVGPGSPMHL 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S +  +AA AYI     IWEVI TGGDPLILS +RL ++L+ L  I HV+ILR H+RVP 
Sbjct: 132 SPEALDAAFAYIASTPSIWEVILTGGDPLILSPRRLAELLERLDAIDHVKILRLHTRVPC 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           VDP+RI P+L+  L+ + K VY+A+HANHP E + +A  A +   +AGI +LSQSVLL+G
Sbjct: 192 VDPERITPDLVALLRGSRKTVYLALHANHPRELTPQARQACAAFIDAGIPMLSQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD  +LA+LMR FVE RIKPYYLHHPDLA GT HFRL+I EGQ ++  L+  +SGLCQ
Sbjct: 252 VNDDASVLADLMRAFVETRIKPYYLHHPDLAPGTGHFRLSIAEGQALMRRLRGHLSGLCQ 311

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           P Y+LDLPGG+GK  +  + +    +    + D+  ++H YPPK
Sbjct: 312 PTYMLDLPGGFGKSPVGPNYLGAENDQGLRVEDYRGMMHAYPPK 355


>gi|218531178|ref|YP_002421994.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           chloromethanicum CM4]
 gi|218523481|gb|ACK84066.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           chloromethanicum CM4]
          Length = 353

 Score =  447 bits (1151), Expect = e-123,   Method: Composition-based stats.
 Identities = 174/345 (50%), Positives = 236/345 (68%), Gaps = 1/345 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L SA  L  A L+    +  ++ ++  Y++++T  +A LI+ ++P+DPIARQFIP+ EE
Sbjct: 4   ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +   PEER DPIGD+ H  + GIVHRY DR+LLK LH+CPVYCRFCFRRE VG      L
Sbjct: 64  IETRPEERADPIGDDAHEAVPGIVHRYADRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +  AA  YI    +IWEV+ TGGDP  LS +RL  + + L  I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V+P R++  L+  LK     V++A+HANHP EF+  A AAI++L +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVDALKGFSGAVFVALHANHPREFTPAARAAIAQLVDAGIPMVSQSVLLRG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD E L  LMR FVE RIKPYYLHH DLA GT H R  + +GQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPQGQALMRTLRGRLSGLAQ 303

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGG+GKV +    +   G  S+ +TD    VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPSYLDAAGE-SWRVTDPSGAVHAYPPES 347


>gi|298571349|gb|ADI87692.1| L-lysine 2,3-aminomutase [uncultured Nitrospirae bacterium MY2-3C]
          Length = 419

 Score =  447 bits (1150), Expect = e-123,   Method: Composition-based stats.
 Identities = 117/347 (33%), Positives = 186/347 (53%), Gaps = 3/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + +L S Q L     ++  ++   +E++  Y   +TP   +LI+  NPNDPI RQ 
Sbjct: 35  WQLSN-SLRSVQALGELLNLQPHEVARYQELTRRYHYRITPYYLSLIDFTNPNDPIRRQG 93

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL+       DP+ +   S + G+VHRYPDR L  +   C +YCR C R+ M   
Sbjct: 94  IPDLSELDFQRVGYSDPLEEEEDSQVPGLVHRYPDRALAIVTSKCAMYCRHCTRKRMWH- 152

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  +  S  +  A + YI+ +  I EVI +GGDPL ++ + L   L  LR I  +++LR 
Sbjct: 153 EGESFRSRDELTAMIDYIRGEVGIREVIVSGGDPLTMNLQLLDWFLGELRAIPRLEVLRI 212

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R+P+V P  I  EL+Q L     P+++    NHP E +  +I A  R+  AGI + +Q
Sbjct: 213 GTRLPVVLPMAITDELVQMLARHR-PLWLNTQFNHPNELTPASIEACDRILRAGIPVSNQ 271

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND  E++ +L      + ++PYYL   D  +G  HFR +I +G +I+  ++  
Sbjct: 272 SVLLRGVNDSVEVMKDLCHALQRVMVRPYYLFQCDPVSGAEHFRTSIWKGIEIIEMMRGH 331

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             GLC P +++D PGG GKV +    +         + ++   +  Y
Sbjct: 332 TGGLCIPTFVVDAPGGGGKVPLQPFYLLSTSEDEVLLRNYEGSIIRY 378


>gi|163852420|ref|YP_001640463.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           extorquens PA1]
 gi|163664025|gb|ABY31392.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           extorquens PA1]
          Length = 353

 Score =  446 bits (1149), Expect = e-123,   Method: Composition-based stats.
 Identities = 175/345 (50%), Positives = 234/345 (67%), Gaps = 1/345 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L SA  L  A L+    +  ++ ++  Y++++T  +A LI+  +P+DPIARQFIP+ EE
Sbjct: 4   ALKSATALARAGLVDAAALPTLERVAARYAVSVTADMAELIDASDPDDPIARQFIPRAEE 63

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +   PEER DPIGD+ H  + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG      L
Sbjct: 64  IETRPEERADPIGDDAHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +   A  YI    +IWEV+ TGGDP  LS +RL  + + L  I HV++LRFH+RVP+
Sbjct: 124 SEAELAVAYRYIAAHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V+P R++  L+  LK     V++A+HANHP EF+  A  AI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARGAIARLVDAGIPMVSQSVLLRG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD E L  LMR FVE RIKPYYLHH DLA GT H R  + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGG+GKV +    +   G  S+ +TD    VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAAGE-SWRVTDPSGAVHAYPPES 347


>gi|300863800|ref|ZP_07108726.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506]
 gi|300338201|emb|CBN53872.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506]
          Length = 384

 Score =  446 bits (1148), Expect = e-123,   Method: Composition-based stats.
 Identities = 121/347 (34%), Positives = 201/347 (57%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+RH+ L+  +       +   +   +      +++A+TP  A+L++P +P  P+  Q 
Sbjct: 38  WQMRHR-LSKLEHFQGLLKLTAAEQRGLSIAPEKFAVAVTPHFASLLDPEDPLCPLRLQV 96

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P++EEL I   +  DP  ++  SP+ G+VHRYPDR+LL  L  C  YCR+C R  +V S
Sbjct: 97  VPKEEELTIDRADMVDPCSEDEDSPVPGLVHRYPDRVLLLALDTCAAYCRYCTRSRLV-S 155

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q      ++  +A +AY++E +++ +V+ +GGDPL++S + L  +L+ LR I H++ +R 
Sbjct: 156 QGEMYPVTRRIDAIIAYLEEHTEVRDVLISGGDPLLMSDEPLDNLLRRLRAIPHIEFVRI 215

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SRVP   PQRI PEL+  L++    V++++H  H  E + E   A   LA+ GI L SQ
Sbjct: 216 GSRVPSFLPQRITPELVAVLRKHR--VWLSLHFCHLRELTPEVAQACDLLADGGIPLGSQ 273

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+ND  + L +L    ++LR++PYYL+  D   GT+H R +++ G  +++ L+  
Sbjct: 274 TVLLKGVNDSEQALKDLFHGLLKLRVRPYYLYQCDPVIGTAHLRTSVQTGIDLISKLRGH 333

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            +G   P Y++D PGG GKV I    +    NG   + +     + Y
Sbjct: 334 TTGYAVPTYVIDAPGGGGKVPIQADTLIAYENGKTTVRNWEGKTYTY 380


>gi|240139757|ref|YP_002964234.1| putative aminomutase, putative kamA and yjeK-like protein
           [Methylobacterium extorquens AM1]
 gi|240009731|gb|ACS40957.1| putative aminomutase, putative kamA and yjeK-like protein
           [Methylobacterium extorquens AM1]
          Length = 353

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 176/345 (51%), Positives = 236/345 (68%), Gaps = 1/345 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L SA  L  A L+    +  ++ ++  Y++++T  +A LI+ ++P+DPIARQFIP+ EE
Sbjct: 4   ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +   PEER DPIGD+ H  + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG      L
Sbjct: 64  IETRPEERADPIGDDTHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +  AA  YI    +IWEV+ TGGDP  LS +RL  +   L  I HV++LRFH+RVP+
Sbjct: 124 SEVELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITDALGAIPHVRVLRFHTRVPV 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V+P R++  L+  LK     V++A+HANHP EF+  A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD E L  LMR FVE RIKPYYLHH DLA GT H R  + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGG+GKV +    +    + S+ +TD    VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAA-DESWRVTDPSGAVHAYPPES 347


>gi|296133315|ref|YP_003640562.1| lysine 2,3-aminomutase YodO family protein [Thermincola sp. JR]
 gi|296031893|gb|ADG82661.1| lysine 2,3-aminomutase YodO family protein [Thermincola potens JR]
          Length = 448

 Score =  445 bits (1146), Expect = e-123,   Method: Composition-based stats.
 Identities = 117/350 (33%), Positives = 189/350 (54%), Gaps = 4/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
             ++++ +   + L     +  ++I++IK++   +  A++P  A+L++  +P+ P+  Q 
Sbjct: 90  WHMKNR-IRDVEVLAQIIDLTDKEIEDIKKVGQKFRWAISPYYASLMSERDPSCPVRLQA 148

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL      ++DP+G+   SP   I  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 149 IPSILELLDQSG-KDDPMGEEFTSPAPCITRRYPDRLIINVTNQCAMYCRHCQRRRNIGE 207

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                    + +AA+ YI+   +I +V+ TGGD L+LS+  L  +L  L  I HV+I R 
Sbjct: 208 VDRNKP-RSEIKAAIEYIRANPEIRDVLITGGDALLLSNSELDWILTQLDSIPHVEIKRI 266

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQRI P+L + L++   P+YI    NHP E +     A  +L  AG +L +Q
Sbjct: 267 GTRTLVSMPQRITPQLCEILEKHP-PLYINTQFNHPKEITPAVAEACDKLIKAGAVLGNQ 325

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL GIN++  ++  L    +++RI+PYY+ H     GTSHF   +EEG KI+  L+  
Sbjct: 326 AVLLNGINNNVHVMKKLNHELLKVRIRPYYIFHAKTVTGTSHFITKVEEGIKIMEKLRGY 385

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SGL  P YI++ P GYGK  +    +   G     I      V  YP K
Sbjct: 386 TSGLAVPTYIINAPKGYGKTPMLPEYLISSGEDEIVIRTWEKKVISYPNK 435


>gi|332703220|ref|ZP_08423308.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332553369|gb|EGJ50413.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 430

 Score =  444 bits (1144), Expect = e-123,   Method: Composition-based stats.
 Identities = 123/341 (36%), Positives = 195/341 (57%), Gaps = 3/341 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+ + +TS QDL +   + + +            +A+TP   +L +   P++ + R  
Sbjct: 73  WQLKSR-ITSYQDLGSMLALSEAEQAA-ANCGAPLPLAITPYYLSLFHDQGPDNGVRRSI 130

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E  + P E EDP+G+++HSP+ G+VHRYPDR+L      C  YCR+C R   VG 
Sbjct: 131 VPTGFERLVNPGEAEDPLGEDHHSPVPGLVHRYPDRVLFLTTDYCAAYCRYCTRSRRVGK 190

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  +  + K  +AA+ YI     + +V+ +GGDPL +S   L  +L  +R I HV+++R 
Sbjct: 191 KACSSGNRKHWDAAIDYIARTPSVRDVLLSGGDPLTMSDAALDYLLGRIRAIPHVEVMRI 250

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            ++ P+V PQRI P+L + L+    P+ I++H  HP E S E+  A  RLA+AGI L SQ
Sbjct: 251 GTKAPMVLPQRITPQLTRVLRRY-HPLMISVHCTHPGELSPESAEAFKRLADAGIPLGSQ 309

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGINDD   L +LM   ++ R++PYYL+H D   GT HFR ++ +G +++  L+  
Sbjct: 310 TVLLKGINDDVPTLKSLMHGLLKNRVRPYYLYHCDPVQGTGHFRTSVAKGVEMIEGLRGH 369

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
            SG   P +++D PGG GK+ ++   I         + +  
Sbjct: 370 TSGYAIPTFVVDAPGGGGKIPVNPDYIVGQDGDDLVLRNFE 410


>gi|295691014|ref|YP_003594707.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC
           21756]
 gi|295432917|gb|ADG12089.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC
           21756]
          Length = 346

 Score =  444 bits (1143), Expect = e-122,   Method: Composition-based stats.
 Identities = 178/346 (51%), Positives = 238/346 (68%), Gaps = 5/346 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           KTL   + L  A LI  E++  ++ ++  Y++A+TP +A LI+  +PNDPIARQF+P  E
Sbjct: 5   KTLRDVRSLAEAGLIPSERLAALEAVAARYAVAVTPAMAELIDTADPNDPIARQFVPAPE 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P E  DPIGD+ HSP+ GI+HRYPDR+LLK  H C VYCRFCFRREMVG +  + 
Sbjct: 65  ELVASPGEDGDPIGDSIHSPVDGIIHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+    +AA AYI  + QIWEVI TGGDP +LS +RL  ++  L  I+HV+++RFH+RVP
Sbjct: 125 LTPAQLDAAFAYIAARPQIWEVIVTGGDPFVLSSRRLAALIDRLEAIEHVKVVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
            VDP  +  +L+  LK + K VY+A+HANH  E +  A AA + L +AGI ++SQ+VLLK
Sbjct: 185 AVDPALVTDDLVAALKRSTKAVYVALHANHARELTPAARAACAHLVDAGIAMVSQTVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDPE L+ LMR FVE RIKPYYLHH DLA GT+H R TIE+GQ I+ +L+  +SGL 
Sbjct: 245 GVNDDPETLSALMRAFVETRIKPYYLHHGDLAPGTAHLRTTIEDGQAIMRALRGTLSGLA 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP Y+LD+PGG+GK  +    +   G     + D +   H YPP +
Sbjct: 305 QPTYVLDIPGGHGKAPVGPSYLSAGG-----VEDPNGRRHAYPPAA 345


>gi|291286722|ref|YP_003503538.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290883882|gb|ADD67582.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 393

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 115/350 (32%), Positives = 198/350 (56%), Gaps = 4/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL +  L S +D+     + + +    +  S     A+TP  A+L+   +  D + R  
Sbjct: 46  WQLAN-ILRSREDVEKIVKLSESEACAFETCSG-LPFAVTPYYASLLTGTSSCDAVRRTV 103

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   E+     E +DP+G+++ SP+ G+VHRYPDR+L  +   C  YCR+C R   +G 
Sbjct: 104 IPTHMEMIKGRGEADDPLGEDSCSPVDGLVHRYPDRVLFLVTEHCSTYCRYCTRSRKMGE 163

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                +  +  + A+ YI+   Q+ +V+ +GGDPL+L    ++ +L++L  I+HV+++R 
Sbjct: 164 IHSGNI-KERWQKAIDYIKATPQVRDVLISGGDPLVLPDASIKWLLESLSAIEHVEMIRI 222

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            ++ P+V PQRI   LI+ LK + +P++++IH  HP E + E + A + LA+AGI L SQ
Sbjct: 223 GTKAPVVLPQRITKSLIKILK-SVRPLFMSIHFTHPDELTAETVQACNMLADAGIPLGSQ 281

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+ND  + L  L    +++R++PYYL+  D  +G+ HFR  +E G  ++  L+  
Sbjct: 282 TVLLKGVNDSVDTLKGLYHGLLKVRVRPYYLYQCDPISGSGHFRTKVETGLNMIKGLRGH 341

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            +G   P Y++D PGG GK+ +     +    G   + ++    + YP +
Sbjct: 342 TTGYAIPNYVIDAPGGGGKIPLIPDYFQGKSEGQIMLKNYQGNTYLYPDE 391


>gi|188582434|ref|YP_001925879.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi
           BJ001]
 gi|179345932|gb|ACB81344.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi
           BJ001]
          Length = 353

 Score =  444 bits (1142), Expect = e-122,   Method: Composition-based stats.
 Identities = 173/343 (50%), Positives = 240/343 (69%), Gaps = 1/343 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L S   L  A L+  E +  ++ ++  Y++++T  +A LI+  +P+DPIARQF+P+ EE
Sbjct: 4   ALKSTTALARAGLLPAEALPALERVAARYAVSVTADMAELIDRDDPHDPIARQFVPRAEE 63

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +    EER DPIGD+ H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG      L
Sbjct: 64  IETRVEERADPIGDDAHAPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPAGHGSL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +  AA  YI +  +IWEV+ TGGDP  LS +RL ++  TL  I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAFRYIADHPEIWEVVVTGGDPFALSPRRLGEIATTLGAIPHVRVLRFHTRVPV 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V+P R++ +++  LK+    V++A+HANHP EF+  A AAI+RL +AG+ ++SQSVLL+G
Sbjct: 184 VEPARVDADVVAALKKFPGAVFVALHANHPREFTPAARAAIARLVDAGLPMVSQSVLLRG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMR FVE RIKPYYLHH DLA GT H R  + EGQ ++  L+ ++SGL Q
Sbjct: 244 VNDDAATLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRHLRGRLSGLAQ 303

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
           P Y+LD+PGG+GKV +    +++  +G++ +TD    VH YPP
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLEE-SDGAWQVTDPSGAVHPYPP 345


>gi|126699870|ref|YP_001088767.1| L-lysine 2,3-aminomutase [Clostridium difficile 630]
 gi|254975845|ref|ZP_05272317.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-66c26]
 gi|255093232|ref|ZP_05322710.1| L-lysine 2,3-aminomutase [Clostridium difficile CIP 107932]
 gi|255307270|ref|ZP_05351441.1| L-lysine 2,3-aminomutase [Clostridium difficile ATCC 43255]
 gi|255314974|ref|ZP_05356557.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-76w55]
 gi|255517649|ref|ZP_05385325.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-97b34]
 gi|255650759|ref|ZP_05397661.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-37x79]
 gi|260683845|ref|YP_003215130.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196]
 gi|260687505|ref|YP_003218639.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291]
 gi|306520670|ref|ZP_07407017.1| lysine 2,3-aminomutase YodO family protein [Clostridium difficile
           QCD-32g58]
 gi|115251307|emb|CAJ69138.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Clostridium difficile]
 gi|260210008|emb|CBA64044.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196]
 gi|260213522|emb|CBE05249.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291]
          Length = 422

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 4/344 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL ++ +T    L     + K++ + IKE+   +  A++P   +LI+P +  DPI    
Sbjct: 62  WQLSNR-ITDVDTLSKIITLTKKEKEYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLS 120

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL    E+  DP+G+   +P   I  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 121 IPTHIELEDEQEDL-DPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q+ +  S    + ++ YI+E  +I +V+ TGGD L L    L+ +L  L+ I HV  +R 
Sbjct: 179 QQDSHKSKAIIQESIDYIRENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRL 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQRI  E    LK+   PVYI  H NHP E ++E+  A  +LANAG+ L +Q
Sbjct: 239 GTRTLVTMPQRITDEFCNMLKKY-HPVYINTHFNHPMEITKESKEACEKLANAGVPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL GIN+D  ++  L +  +++R+KPYY+       GT HF  ++++G +I+  L+  
Sbjct: 298 AVLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGY 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            SG+  P YI++ P G GK  +    +   G     +      V
Sbjct: 358 TSGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKV 401


>gi|167644729|ref|YP_001682392.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31]
 gi|167347159|gb|ABZ69894.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31]
          Length = 347

 Score =  443 bits (1139), Expect = e-122,   Method: Composition-based stats.
 Identities = 179/346 (51%), Positives = 243/346 (70%), Gaps = 4/346 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + L SAQ L  A L+  E++  I+ ++  Y++A+TP +A LI+P N +DPIARQFIP + 
Sbjct: 5   RPLRSAQALAEAGLVAAERLPAIEAVAARYAVAITPDMAALIDPANESDPIARQFIPSEA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL+  P E  DPIGD  HSP++GIVHRYPDR+LLK  H C VYCRFCFRREMVG +    
Sbjct: 65  ELSENPGEIPDPIGDEAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLAN 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+ +  +AA AYI   S+IWEVI TGGDPL+LS +RL+ + + L  I+HV+++RFH+R+P
Sbjct: 125 LTPEKLDAAFAYIAAHSEIWEVIITGGDPLVLSPRRLRDIGERLAGIEHVKVVRFHTRIP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +VDP  I  E++  LK +GK VY+A+HANH  E +E A AA +R+ +AG+ +LSQ+VLLK
Sbjct: 185 VVDPGAITGEMVDALKASGKTVYVALHANHARELTEAARAACARIIDAGVPMLSQTVLLK 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GINDDPE L  LMR FVE RI+PYYLHH D A GT H R ++E+G+ ++ +++ + SGLC
Sbjct: 245 GINDDPETLGTLMRAFVESRIRPYYLHHGDHAPGTGHLRTSVEDGRALMRAIRGRFSGLC 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP Y+LD+P G+GKV I    +   G     + D +   H YPP  
Sbjct: 305 QPTYVLDIPDGHGKVPIGPDYLAVEGE----VEDPNGGAHAYPPVG 346


>gi|255101396|ref|ZP_05330373.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-63q42]
          Length = 422

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 186/344 (54%), Gaps = 4/344 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL ++ +T    L     + K++ + IKE+   +  A++P   +LI+P +  DPI    
Sbjct: 62  WQLSNR-ITDVDTLSKIITLTKKEKEYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLS 120

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL    E+  DP+G+   +P   I  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 121 IPTHIELEDEQEDL-DPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q+ +  S    + ++ YI+E  +I +V+ TGGD L L    L+ +L  L+ I HV  +R 
Sbjct: 179 QQDSHKSKAIIQESIDYIRENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRL 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQRI  E    LK+   P+YI  H NHP E ++E+  A  +LANAG+ L +Q
Sbjct: 239 GTRTLVTMPQRITDEFCNMLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL GIN+D  ++  L +  +++R+KPYY+       GT HF  ++++G +I+  L+  
Sbjct: 298 AVLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGY 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            SG+  P YI++ P G GK  +    +   G     +      V
Sbjct: 358 TSGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKV 401


>gi|255656236|ref|ZP_05401645.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-23m63]
 gi|296450329|ref|ZP_06892088.1| lysine 2,3-aminomutase [Clostridium difficile NAP08]
 gi|296878741|ref|ZP_06902744.1| lysine 2,3-aminomutase [Clostridium difficile NAP07]
 gi|296260822|gb|EFH07658.1| lysine 2,3-aminomutase [Clostridium difficile NAP08]
 gi|296430248|gb|EFH16092.1| lysine 2,3-aminomutase [Clostridium difficile NAP07]
          Length = 422

 Score =  442 bits (1138), Expect = e-122,   Method: Composition-based stats.
 Identities = 115/344 (33%), Positives = 186/344 (54%), Gaps = 4/344 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL ++ +T    L     + K++ + IKE+   +  A++P   +LI+P +  DPI    
Sbjct: 62  WQLSNR-ITDVDTLSKIITLTKKEKEHIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLS 120

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL    E+  DP+G+   +P   I  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 121 IPTYIELEDEQEDL-DPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q+ +  S    + ++ YI+E  +I +V+ TGGD L L    L+ +L  L+ I HV  +R 
Sbjct: 179 QQDSHKSKAIIQESIDYIRENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRL 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQRI  E    LK+   P+YI  H NHP E ++E+  A  +LANAG+ L +Q
Sbjct: 239 GTRTLVTMPQRITDEFCNMLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL GIN+D  ++  L +  +++R+KPYY+       GT HF  ++++G +I+  L+  
Sbjct: 298 AVLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGY 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            SG+  P YI++ P G GK  +    +   G     +      V
Sbjct: 358 TSGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKV 401


>gi|302872649|ref|YP_003841285.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302575508|gb|ADL43299.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 406

 Score =  441 bits (1136), Expect = e-122,   Method: Composition-based stats.
 Identities = 129/346 (37%), Positives = 211/346 (60%), Gaps = 5/346 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL++  +TSA+ L     + +++  +I+E++  Y  A++P   +LI+P +P+ PI +Q 
Sbjct: 63  WQLKN-MITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPSCPIKKQS 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL    E   DP+ + + SP K +  RYPDR+++K+ ++C ++CRFC RR ++G 
Sbjct: 122 VPSSLELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  T  S  D   A+ Y+ +   I +V+ TGGD L+LS + L+ +L++LR I HV+I+R 
Sbjct: 179 ETDTHASLDDITDAIEYVAKNPHIRDVLITGGDALLLSDEILEWILRSLRQIPHVEIIRI 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQRI  EL+  LK+   P+YI  H NHP E ++E+  A   L++AG+ L +Q
Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLSDAGVPLGNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL G+N+D  I+  L +  +++R+KPYY+ HP    GTSHF + IEEG +I+ SL+ +
Sbjct: 298 MVLLNGVNNDKYIVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVAIEEGIEIIESLRGR 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
            SG+  P YI++ P G GK  I  + +  VG     + +    V +
Sbjct: 358 TSGMAVPTYIVNAPKGKGKTPILPNYLLYVGKDKVVLRNWEGEVFE 403


>gi|251773208|gb|EES53760.1| Lysine 2,3-aminomutase [Leptospirillum ferrodiazotrophum]
          Length = 411

 Score =  441 bits (1135), Expect = e-122,   Method: Composition-based stats.
 Identities = 134/359 (37%), Positives = 212/359 (59%), Gaps = 18/359 (5%)

Query: 1   MQ------LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND 54
            Q      +RH      + +  AN +  E+++ +      Y I +     +LI   +P D
Sbjct: 4   WQKLLVEGIRHGADLPPEWVIEANGVGPEKVEGL------YPIRINDYYRSLI--SDPQD 55

Query: 55  PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           PI  Q IP   E     +  EDP+G++  SP+  IVHRYPDR+L  + + CP+YCR+C R
Sbjct: 56  PIGLQVIPDPAEWMD-ADSPEDPLGEDADSPVPAIVHRYPDRVLFLVTNQCPIYCRYCTR 114

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
           + +VG  +G V+S ++    + YI+E  ++ +VI +GGDPL+L  + L+++L  LR I+H
Sbjct: 115 KRLVGKPEG-VVSREEIRQGIDYIREHPEVRDVILSGGDPLMLKDEVLEEILTGLRSIEH 173

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           ++I+R  +RVP   PQR+ PEL + L     P+Y+ +H NHP E + E+  A   LA+AG
Sbjct: 174 LEIIRIGTRVPSALPQRVTPELCRMLSRF-HPLYMNLHFNHPREITPESSEACRLLADAG 232

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
           I L  Q+VL+KGINDD E+L  L +  +++R+KPYYL+  DL  G +HFR  +E+G  I+
Sbjct: 233 IPLGCQTVLMKGINDDAEVLGTLFKGLLKIRVKPYYLYQADLTRGANHFRTPVEKGISIM 292

Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            +L+  ISG+  P +++D PGG GK+ +     +    NG   + ++ N ++ YP  SS
Sbjct: 293 KALQGNISGMAIPHFVIDAPGGGGKIPVLADDYLLGRENGQVLLKNYENKIYSYPDVSS 351


>gi|116332642|ref|YP_802359.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116127509|gb|ABJ77601.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 370

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 129/347 (37%), Positives = 193/347 (55%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + +   L     + +++    +  S  +  ++TP   NL +  +PN PI  Q 
Sbjct: 24  WQIQNR-IKTQTQLSEHIELTEKETLSFEACSEFFEFSVTPYYLNLADTKDPNCPIRLQI 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P + EL     ER+DP+ +  H P+KG+ HRYPDR L  L HVC VYCRFC R+  V  
Sbjct: 83  VPHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSK 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T    ++ + AL Y +   +I EVI +GGDPL LS ++L  +L  L+ I H+  +R 
Sbjct: 143 SVHT-PGKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
           HSR P+  P RI+  L    K+   P+Y+  H NHP E +      IS L   G +I+L+
Sbjct: 202 HSRYPVTLPMRIDSSLCSVFKKHF-PIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLN 260

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLKGIND  E L  L      + IKPYYLH  D   G+  FR+ IE G +I+  ++ 
Sbjct: 261 QSVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRG 320

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
           +ISGL  P Y++DL GG GKV + T  +    + SY   ++ + +++
Sbjct: 321 RISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYIFRNYQDELYE 367


>gi|300022957|ref|YP_003755568.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299524778|gb|ADJ23247.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 356

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 176/347 (50%), Positives = 238/347 (68%), Gaps = 1/347 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           M    + LTS  DL  A L      D +  +   Y+I++TP +A+LI+P++P DPIARQF
Sbjct: 1   MTRTPRKLTSVDDLIAAELAPASARDALNNVGARYAISVTPAVADLIDPNDPADPIARQF 60

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL     ER DPIGD   SP  G+VHRYPDR+LLK+  VCPVYCRFCFRREMVG 
Sbjct: 61  VPDARELETHAAERADPIGDRIKSPAPGVVHRYPDRVLLKIASVCPVYCRFCFRREMVGP 120

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             G  LS+ D  AA+AYI+    +WEVI TGGDPL+LS +R+++V + L  I HV+ILR+
Sbjct: 121 ANGETLSADDLAAAVAYIRATPAVWEVILTGGDPLVLSPRRIREVTEMLSAIPHVKILRW 180

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           H+RVP+VDP R+  ELI  LK   K V++ +H NH  E +  A  A+++L +AGI L+SQ
Sbjct: 181 HTRVPVVDPDRVTDELIAALKATHKTVFVGLHTNHARELTGSARTAVAKLVDAGIPLVSQ 240

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+NDD + L +LMRT VELR+KPYYLHH DLA GT+HFR TI +GQ ++  L+++
Sbjct: 241 TVLLKGVNDDADTLEDLMRTLVELRVKPYYLHHGDLAPGTAHFRTTIAKGQAVMRELRKR 300

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           +SGL  P Y+LDLPG +GKV ++++   +   G   + D ++  H Y
Sbjct: 301 LSGLALPTYVLDLPGAHGKVPLESYASLESS-GRTRLRDAYDQEHIY 346


>gi|254562169|ref|YP_003069264.1| aminomutase [Methylobacterium extorquens DM4]
 gi|254269447|emb|CAX25413.1| putative aminomutase, putative homologue kamA and yjeK
           [Methylobacterium extorquens DM4]
          Length = 353

 Score =  441 bits (1134), Expect = e-121,   Method: Composition-based stats.
 Identities = 174/345 (50%), Positives = 235/345 (68%), Gaps = 1/345 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L SA  L  A L+  + +  ++ ++  Y++++T  +A LI+  +P DPIARQFIP+ EE
Sbjct: 4   ALKSATALARAGLVDAQALPALERVAARYAVSVTADMAELIDASDPADPIARQFIPRAEE 63

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +   PEER DPIGD+ H  + G+VHRYPDR+LLK LH+CPVYCRFCFRRE VG      L
Sbjct: 64  IETRPEERADPIGDDAHEAVSGVVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +  AA  YI    +IWEV+ TGGDP  LS +RL  + + L  I HV++LRFH+RVP+
Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V+P R++  L+  LK     V++A+HANHP EF+  A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  E L  LMR FVE RIKPYYLHH DLA GT H R  + EGQ ++ +L+ ++SGL Q
Sbjct: 244 VNDVAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGG+GKV +    +    + S+ +TD    VH YPP+S
Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAA-DESWRVTDPSGAVHAYPPES 347


>gi|24217359|ref|NP_714842.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24202437|gb|AAN51857.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 365

 Score =  440 bits (1133), Expect = e-121,   Method: Composition-based stats.
 Identities = 131/347 (37%), Positives = 194/347 (55%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + +   L     + +++I   +  S  +  ++TP    L +P +PN PI  Q 
Sbjct: 19  WQIQNR-IKTRTHLSEFLELSEKEILSFEACSQFFEFSVTPYYLGLADPKDPNCPIRLQI 77

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P +EEL     E++DP+ +    P+KG+ HRYPDR L  L HVC VYCRFC R+  V S
Sbjct: 78  VPHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKV-S 136

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +       +D + AL Y     +I EVI +GGDPL LS  +L  +LK L+ I H+  +R 
Sbjct: 137 KSSHTPGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRI 196

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
           HSR P+  P RI+  L   LK    P+YI  H NHP E +      IS L   G  ++L+
Sbjct: 197 HSRYPVTLPMRIDSSLCAVLKRHF-PIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLN 255

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q VLLKGIND  E L  L      + IKPYYLH  D   G+  FR+ IE+G +I+  ++ 
Sbjct: 256 QGVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRG 315

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
           +ISGL  P Y++DL GG GKV + T  + +  + SY   ++ + +++
Sbjct: 316 RISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYRDELYE 362


>gi|116329760|ref|YP_799479.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116122653|gb|ABJ80546.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 370

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 129/347 (37%), Positives = 194/347 (55%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + +   L     + +++    +  S  +  ++TP   NL +  +PN PI  Q 
Sbjct: 24  WQIQNR-IKTQTQLSEHIELTEKETLSFEACSEFFEFSVTPYYLNLADTKDPNCPIRLQI 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P + EL     ER+DP+ +  H P+KG+ HRYPDR L  L HVC VYCRFC R+  V  
Sbjct: 83  VPHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSK 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T    ++ + AL Y +   +I EVI +GGDPL LS ++L  +L  L+ I H+  +R 
Sbjct: 143 SVHT-PGKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRI 201

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
           HSR P+  P RI+  L    K+   P+Y+  H NHP E +      IS L   G +I+L+
Sbjct: 202 HSRYPVTLPMRIDSSLCSVFKKHF-PIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLN 260

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLKGIND  E L  L      + IKPYYLH  D   G+  FR+ IE G +I+  ++ 
Sbjct: 261 QSVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRG 320

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
           +ISGL  P Y++DL GG GKV + T  +    + SY + ++ + +++
Sbjct: 321 RISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYILRNYQDELYE 367


>gi|83589322|ref|YP_429331.1| L-lysine 2,3-aminomutase [Moorella thermoacetica ATCC 39073]
 gi|83572236|gb|ABC18788.1| glutamate 2,3-aminomutase [Moorella thermoacetica ATCC 39073]
          Length = 415

 Score =  440 bits (1132), Expect = e-121,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 188/347 (54%), Gaps = 5/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H+ +TS   L     + + + + I ++   Y  A++P   +L+ P  P+ PI RQ 
Sbjct: 64  WQLTHR-ITSVATLAELIPLTEAEKEAILKVERTYRWAVSPYYLSLMGPE-PDCPIRRQA 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL        DP+ +   SP   I  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 122 LPSAAELEDN-HGVLDPMDEELTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRRNIG- 179

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +     S ++ E AL YI++  +I +V+ TGGD L+LS   +  +L  L  I HV+I R 
Sbjct: 180 EVDRSRSRRELEQALQYIRQNEEIRDVLITGGDALMLSDAMIDWLLTELDNIPHVEIKRL 239

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  PQRI PEL + L +   P+Y+    NHP E +  A  A  RL  AG++L +Q
Sbjct: 240 GTRVPVTMPQRITPELCRVLAKHP-PIYLNTQFNHPREVTAAAKEACDRLVQAGVVLGNQ 298

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+N+ P ++  L +  +++R++PYY+ H     GT+HF  +IEEG +I+  L+  
Sbjct: 299 AVLLKGVNNHPFVMRKLNQELLKIRVRPYYIFHAKPVKGTTHFITSIEEGVEIMDKLRGY 358

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P YI++ P G GK  I    +    +    +      +  Y
Sbjct: 359 TSGLAVPTYIINAPHGLGKTPILPQYVIARNDHQVILRTWEKRIIFY 405


>gi|170749147|ref|YP_001755407.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           radiotolerans JCM 2831]
 gi|170655669|gb|ACB24724.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 347

 Score =  439 bits (1130), Expect = e-121,   Method: Composition-based stats.
 Identities = 177/347 (51%), Positives = 241/347 (69%), Gaps = 1/347 (0%)

Query: 5   HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
           ++ L SA DL +A LI   + D +  +   Y++++TP +A LI+P +P+DPI RQF+P+ 
Sbjct: 2   NRALRSADDLLSAGLISGAEADALGAVLARYAVSVTPDMAELIDPQDPDDPIGRQFVPRV 61

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            E    PEER DPIGD  H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRREMVG     
Sbjct: 62  AEAVATPEERADPIGDAAHAPVTGIVHRYPDRVLLKPLHVCPVYCRFCFRREMVGPDGLG 121

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            L+  + +AALAYI +  +IWEV+ TGGDP  LS +RL  + + L  I HV+++R H+RV
Sbjct: 122 TLTDAELDAALAYIAQDPRIWEVVLTGGDPFALSPRRLGVIAERLAAIAHVRVMRVHTRV 181

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V P  ++  L++ LK  G+ V++A+HANHP EF+  A AA +RL +AGI L+ QSVLL
Sbjct: 182 PVVKPDLVSDALVRALKRFGRAVFVAVHANHPREFTAAASAACARLVDAGIPLVGQSVLL 241

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           +G+ND+   L  LMRT VE RIKPYYLHH DLA GT+H R  + EGQ ++ +L+ ++SGL
Sbjct: 242 RGVNDEAATLEALMRTLVENRIKPYYLHHGDLAPGTAHLRTDVAEGQALMRALRGRLSGL 301

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
            QP Y+LD+PGG+GKV I    ++   +G   +TD     H YPPK+
Sbjct: 302 AQPTYVLDIPGGHGKVPIGPGYLRDTPDG-VRVTDPGGQDHAYPPKA 347


>gi|188586383|ref|YP_001917928.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179351070|gb|ACB85340.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 412

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 110/351 (31%), Positives = 189/351 (53%), Gaps = 4/351 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ ++  + L     + + +  EI+++   Y  A++P  A+L++P +P  P+ +Q 
Sbjct: 63  WQLQNR-ISDVETLEKILNLTESERQEIEQVGKDYRWAVSPYYASLMDPDDPECPVRKQS 121

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E+        DP+ +   +P   +  RYPDR+++ + + C +YCR C R+  +G 
Sbjct: 122 IPSAQEVKDKAG-VTDPMAEEFTNPAGNVTRRYPDRLIINVTNQCAMYCRHCQRKRNIG- 179

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +          E ++ Y++  ++I +V+ TGGD  +LS + L  +L  LR I HV+I+R 
Sbjct: 180 EVDKPTPKDVLEESIEYVKNHAEIRDVLLTGGDAFMLSDETLDWLLTELRKIPHVEIIRL 239

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR P+  PQRI   L   L +   P+Y+    NHP E + EA  A  +LA AG+ L +Q
Sbjct: 240 GSRTPVTMPQRITQNLCDILTKH-LPLYVNTQYNHPKELTAEAKKATFKLARAGVGLGNQ 298

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL  IN+DP ++  L    ++  ++PYY+ H     GT+HF   +E+G +I+  ++  
Sbjct: 299 AVLLNTINNDPHVMKTLCHELLKGMVRPYYIFHAKKVKGTTHFNTRVEDGLEILEKMRGY 358

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
            SG+  P YI++ P G+GK  I    +   G     I    N V +YP  +
Sbjct: 359 TSGMAIPSYIINAPDGHGKTPIVPEYMISQGRDKVYIRTWENRVFEYPNDA 409


>gi|45655809|ref|YP_003618.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45602780|gb|AAS72255.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 365

 Score =  439 bits (1129), Expect = e-121,   Method: Composition-based stats.
 Identities = 131/347 (37%), Positives = 194/347 (55%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + +   L     + +++I   +  S  +  ++TP    L  P +PN PI  Q 
Sbjct: 19  WQIQNR-IKTRTHLSEFLELSEKEILSFEACSQFFEFSVTPYYLGLAAPKDPNCPIRLQI 77

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P +EEL     E++DP+ +    P+KG+ HRYPDR+L  L HVC VYCRFC R+  V S
Sbjct: 78  VPHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRVLWYLSHVCAVYCRFCTRKRKV-S 136

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +       +D + AL Y     +I EVI +GGDPL LS  +L  +LK L+ I H+  +R 
Sbjct: 137 KSSHTPGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRI 196

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239
           HSR P+  P RI+  L   LK    P+YI  H NHP E +      IS L   G  ++L+
Sbjct: 197 HSRYPVTLPMRIDSSLCAVLKRHF-PIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLN 255

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q VLLKGIND  E L  L      + IKPYYLH  D   G+  FR+ IE+G +I+  ++ 
Sbjct: 256 QGVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRG 315

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
           +ISGL  P Y++DL GG GKV + T  + +  + SY   ++ + +++
Sbjct: 316 RISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYQDELYE 362


>gi|78045085|ref|YP_361273.1| putative L-lysine 2,3-aminomutase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77997200|gb|ABB16099.1| putative L-lysine 2,3-aminomutase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 411

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 121/348 (34%), Positives = 202/348 (58%), Gaps = 4/348 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +T+ + L     +  + + E++E+S  Y  A++P   +LI+P +P+  I +Q 
Sbjct: 66  WQLKNR-ITTPEVLRKILPLSDQVLWELEEVSKVYRFAISPYYLSLIDPDDPDCGIKKQS 124

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   E+     E  DP+ +   SP+  +  RYPDR+++ + ++C +YCR C RR  +G 
Sbjct: 125 IPSILEVLDDTGEL-DPMNEAGTSPVAAVTRRYPDRLIINVTNMCGMYCRHCQRRRNIG- 182

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +       +  + AL YI+E  +I +V+ TGGD L+LS   L  +LK L  I HV+I R 
Sbjct: 183 EVDRKTPREQIKEALLYIREHKEIRDVLITGGDALLLSDLELDWILKELSEIPHVEIKRI 242

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  PQR+   L++ LK+   P+YI    NHP E + EA  A+ +L  AG++L +Q
Sbjct: 243 GTRVPVTLPQRVTDNLVKILKKYP-PIYINTQFNHPREVTPEAKKAVDKLIEAGVVLGNQ 301

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+ND+P I+  L    +++R++PYY+       GT HF   IE+G +I+ SL+  
Sbjct: 302 AVLLKGVNDNPVIMEKLNHELLKIRVRPYYIFQAKRVRGTMHFVPKIEDGLRIMESLRGY 361

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SGL  P+YI++ PGG+GK+ +    + ++      + +    +  YP
Sbjct: 362 TSGLAVPYYIVNAPGGFGKIPLLPQYLIELSEEEAVLRNWEGRIIRYP 409


>gi|297569348|ref|YP_003690692.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296925263|gb|ADH86073.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 360

 Score =  438 bits (1128), Expect = e-121,   Method: Composition-based stats.
 Identities = 135/352 (38%), Positives = 202/352 (57%), Gaps = 10/352 (2%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q L   ++T  Q L +   +       +K ++  Y + + P   +LIN   P DPI RQ
Sbjct: 16  WQRLLAASITCPQALADRFGLDPA---PLKAVTARYPLRINPYYLSLINQ--PGDPIWRQ 70

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   EL        DP+G+ ++SP+ G+VH+Y DR LL +   C +YCRFC R+  VG
Sbjct: 71  AVPDVRELEDTVC-PADPLGEEDYSPVPGLVHKYRDRALLLVTGQCAMYCRFCTRKRKVG 129

Query: 120 SQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           +++     S+   +AALAY+++   I +V+ +GGDPL+L   RL  +L  LR I+H++I+
Sbjct: 130 TREMAAAGSAAQLDAALAYLEQTPAIHDVLISGGDPLLLPDGRLIPLLTRLRRIRHLEII 189

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  SRVP   PQR+  +L   LK+   P++I  H NHP E + EA  A  RLA+AGI L 
Sbjct: 190 RLGSRVPCTLPQRVTLKLAAALKKF-HPLFINTHFNHPREITPEAARACQRLADAGIPLG 248

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKG+NDD   +  LMR  +++R+KPYYL   DL+ GT HFR  +E+G  I+  L 
Sbjct: 249 NQTVLLKGVNDDAATIRELMRGLLKIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELI 308

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
              SGL  P + LD P G GK+ +    ++ +G+     T++  +   YP  
Sbjct: 309 GHTSGLATPTFALDAPEGRGKIPLTPDYLQSLGD-KLIFTNYQGLPCQYPNP 359


>gi|108761049|ref|YP_632864.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
 gi|108464929|gb|ABF90114.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
          Length = 410

 Score =  438 bits (1127), Expect = e-121,   Method: Composition-based stats.
 Identities = 115/350 (32%), Positives = 183/350 (52%), Gaps = 3/350 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH  +   + L     +   +   ++E S  + I ++P   +LI+P +P  P+  Q 
Sbjct: 39  WQQRH-AVRGLEQLERYVPLTSNERAGVQETSALFRIGISPYYLSLIDPEHPFCPVRMQS 97

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP + E  I P E  DP+G++   P + IVH+YPDR+L   L  C VYCR C RR +   
Sbjct: 98  IPVRAEARIRPGELADPLGEDKTRPEECIVHKYPDRVLFLALDTCSVYCRHCTRRRITQG 157

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                LS +     + Y++   ++ +V+ +GGDP +LS  RL+++L  L  I HV+++R 
Sbjct: 158 GVAE-LSKEQLRRGVDYVRSHPEVRDVLISGGDPFMLSDSRLEELLAPLSEIPHVEMIRI 216

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  P R+   L + L+    PV++  H NHP E + EA  A  RL + G+ + +Q
Sbjct: 217 GTRVPVCLPMRVTDALAKTLRRYA-PVFVVTHFNHPKEVTPEAREACERLVDHGVPVENQ 275

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VL++ +N D  I+  L    +  R++PYYLH  D+A G  H R  I +G +I+  L+  
Sbjct: 276 AVLMRQLNSDARIIKELSHLLLRSRVRPYYLHQMDVAEGCEHLRTPIAKGLEIIQQLRGY 335

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            +GL  P   +DLPGG GKV +      + G       ++      YP  
Sbjct: 336 TTGLAVPHLAVDLPGGGGKVTLQPDYAVEYGAQETVFRNYKGERFTYPEP 385


>gi|206603974|gb|EDZ40454.1| Lysine 2,3-aminomutase [Leptospirillum sp. Group II '5-way CG']
          Length = 383

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 122/322 (37%), Positives = 194/322 (60%), Gaps = 6/322 (1%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           E+   + + +     +LI   +P  PI RQ IP  EE+    +   DP+G+++ SP+  I
Sbjct: 33  EVEKTFPVRINAYYRSLI--TDPEGPIGRQVIPDPEEVLDF-DSPVDPLGEDSDSPVPAI 89

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           VHRYPDR+L  + + CP+YCR+C R+ M+G+ +G V++  + E  + YI+   ++ +VI 
Sbjct: 90  VHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEG-VVTRSEVEEGIEYIRTHPEVRDVIL 148

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL+L    L+ +L  LR I H++I+R  SRVP   PQR+ PEL   LK+   P+++
Sbjct: 149 SGGDPLMLKDDYLEFILSGLRKIPHLEIIRIGSRVPSSLPQRVTPELCAMLKKY-HPLFM 207

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
            +H NHP E + E+  A + LA+AGI L  Q+VL+KG+ND+  IL  L +  + +R+KPY
Sbjct: 208 NLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKLLTIRVKPY 267

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID-THNIK 328
           YL+  DL  G +HFR  +  G +I+  L+   SG+  P +++D PGG GKV I     + 
Sbjct: 268 YLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVPILPPDYLV 327

Query: 329 KVGNGSYCITDHHNIVHDYPPK 350
            + +G   + ++   V+ YP  
Sbjct: 328 SMEDGDVVLRNYEGNVYTYPDA 349


>gi|15605944|ref|NP_213321.1| hypothetical protein aq_454 [Aquifex aeolicus VF5]
 gi|4033489|sp|O66761|Y454_AQUAE RecName: Full=Uncharacterized KamA family protein aq_454
 gi|2983117|gb|AAC06722.1| hypothetical protein aq_454 [Aquifex aeolicus VF5]
          Length = 370

 Score =  437 bits (1124), Expect = e-120,   Method: Composition-based stats.
 Identities = 124/345 (35%), Positives = 202/345 (58%), Gaps = 8/345 (2%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + + +++     +  E+ + IK     Y  A+TP   +LINP +P DPI  Q 
Sbjct: 18  WQIQNR-IKTLKEIKKYLKLLPEEEEGIKRTQGLYPFAITPYYLSLINPEDPKDPIRLQA 76

Query: 61  IPQKEELN--ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           IP+  E++  +      D + +     + G+ HRYPDR+LL +   C VYCR C R+ + 
Sbjct: 77  IPRVVEVDEKVQSAGEPDALKEEGD--IPGLTHRYPDRVLLNVTTFCAVYCRHCMRKRIF 134

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            SQ     + ++ +  + YI+   +I +V+ +GG+PL LS ++L+ +L  LR IKHV+I+
Sbjct: 135 -SQGERARTKEEIDTMIDYIKRHEEIRDVLISGGEPLSLSLEKLEYLLSRLREIKHVEII 193

Query: 179 RFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           RF +R+P++ PQR  N +L+  L++   P++I  H NHP E +E A  A+ RL   GI +
Sbjct: 194 RFGTRLPVLAPQRFFNDKLLDILEKYS-PIWINTHFNHPNEITEYAEEAVDRLLRRGIPV 252

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLLKG+NDDPE++  L R  + +++KP YL H D   G  HFR TI++G +I+  L
Sbjct: 253 NNQTVLLKGVNDDPEVMLKLFRKLLRIKVKPQYLFHCDPIKGAVHFRTTIDKGLEIMRYL 312

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342
           + ++SG   P Y +DLPGG GKV +  + +KK     +       
Sbjct: 313 RGRLSGFGIPTYAVDLPGGKGKVPLLPNYVKKRKGNKFWFESFTG 357


>gi|75675833|ref|YP_318254.1| hypothetical protein Nwi_1641 [Nitrobacter winogradskyi Nb-255]
 gi|74420703|gb|ABA04902.1| L-lysine 2,3-aminomutase [Nitrobacter winogradskyi Nb-255]
          Length = 366

 Score =  436 bits (1122), Expect = e-120,   Method: Composition-based stats.
 Identities = 179/354 (50%), Positives = 240/354 (67%), Gaps = 10/354 (2%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL   +DL    L     + ++++++  Y+IA+TP +ANLI+P +P+DPIARQ++P  +E
Sbjct: 12  TLRRPEDLIAHGLAPAAALADLEKVAARYAIAITPEVANLIDPADPDDPIARQYLPSADE 71

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L     ER DPIGD+  SP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K T L
Sbjct: 72  LAAQAYERADPIGDHARSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETAL 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S   T AAL YI+   ++WEVI TGGDPL+LS +RL +++  L  I HV+I+R H+RVP+
Sbjct: 132 SKSATAAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVPV 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP R+  E+   L+  G   ++A+HANHP E +  A AA +R+ +AGI ++SQSVLL+G
Sbjct: 192 ADPARVTDEMAAALRTDGATTWLALHANHPRELTAAARAACARIIDAGIPMVSQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMR FV+ RIKPYYLHH DLA GT+H R T+E+GQ ++  L+ ++SGLCQ
Sbjct: 252 VNDDAATLEALMRAFVQCRIKPYYLHHGDLAPGTAHLRTTLEQGQALMRELRGRVSGLCQ 311

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----------NGSYCITDHHNIVHDYPPK 350
           P Y+LD+PGGYGK  +    +                 Y ITD+   VH YPPK
Sbjct: 312 PDYVLDIPGGYGKSPVGPGYMSPSDLISGAGEHRPELHYLITDYCGGVHLYPPK 365


>gi|310822787|ref|YP_003955145.1| l-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
 gi|309395859|gb|ADO73318.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
          Length = 411

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 118/350 (33%), Positives = 187/350 (53%), Gaps = 3/350 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH  + S   L     +  ++   ++E +  + + ++P   +LI+P +P  P+  Q 
Sbjct: 47  WQQRH-AVRSLAQLERYVPLTPQERAGVQETAALFRVGISPYYLSLIDPEHPFCPVRMQS 105

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP +EE  I P E  DP+G++   P + IVH+YPDR+L   L  C VYCR C RR +   
Sbjct: 106 IPVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRRITKG 165

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                LS       +AYI+   ++ +V+ +GGDP ILS  RL+++L  L  I HV+++R 
Sbjct: 166 -GEAELSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRI 224

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  P R+   L   L+    PVY+  H NHP E + EA  A  RL + G+ + +Q
Sbjct: 225 GTRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQ 283

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VL++ +N D  I+  L    + +R++PYYLH  D+A G  H R  I +G +I+  ++  
Sbjct: 284 AVLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGH 343

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            +GL  P   +DLPGG GKV +    + + G       ++    + YP  
Sbjct: 344 TTGLAVPHLAVDLPGGGGKVTLQPDYVVERGEHETVFRNYKGERYVYPEP 393


>gi|16124969|ref|NP_419533.1| L-lysine 2,3-aminomutase [Caulobacter crescentus CB15]
 gi|13421941|gb|AAK22701.1| L-lysine 2,3-aminomutase, putative [Caulobacter crescentus CB15]
          Length = 345

 Score =  436 bits (1121), Expect = e-120,   Method: Composition-based stats.
 Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 5/346 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL  A+ L  A L+  E++  ++ ++  Y++A+TP +A LI+P   +DPIARQF+P  E
Sbjct: 5   QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P E  DPIGD  HSP++GIVHRYPDR+LLK  H C VYCRFCFRREMVG +  + 
Sbjct: 65  ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+    +AA AYI ++ QIWEVI TGGDPL+LS +RL  ++  L  I HV+I+RFH+RVP
Sbjct: 125 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 184

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
            VDP  + PEL+  LK + K VY+A+HANH  E +  A AA +++ +AG+ ++SQ+VLL+
Sbjct: 185 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 244

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+PE L  LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+  +SGL 
Sbjct: 245 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 304

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP Y+LD+PGG+GKV +  + +         + D    V  YPP +
Sbjct: 305 QPTYVLDIPGGHGKVPVGPNYLSDGA-----VEDPDGAVRPYPPTA 345


>gi|85717361|ref|ZP_01048313.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A]
 gi|85695836|gb|EAQ33742.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A]
          Length = 365

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 181/355 (50%), Positives = 243/355 (68%), Gaps = 10/355 (2%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           T+   +DL    L     + ++++++  Y+IA+TP +A LI+P +P+DPIARQ++P   E
Sbjct: 11  TVRHPEDLIAHGLAPAAALADLEKVAARYAIAITPEVAGLIDPTDPDDPIARQYLPSANE 70

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   P ER DPIGD+ HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K T L
Sbjct: 71  LAAQPGERADPIGDHAHSPVDGIVHRYPDRVLLKLIHVCAVYCRFCFRREMVGPAKETAL 130

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S   T AAL YI+   ++WEVI TGGDPL+LS +RL +++  L  I HV+I+R H+RVP+
Sbjct: 131 SKSATTAALDYIRAHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVPV 190

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            D  R+  E++  L+  G   ++A+HANHP E +  A AA +R+ +AGI ++SQSVLL+G
Sbjct: 191 ADSARVTDEMVAGLRTEGAATWLALHANHPRELTAAARAACARIVDAGIPMVSQSVLLRG 250

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMR FVE RIKPYYLHH DLA GT+H R T+EEGQ ++ +L+ ++SGLCQ
Sbjct: 251 VNDDAATLETLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEEGQLLMRALRGRVSGLCQ 310

Query: 307 PFYILDLPGGYGKVKIDTHNI----------KKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGGYGKV +    +          +      Y ITD+   VH YPP S
Sbjct: 311 PDYVLDIPGGYGKVPVGPDYMSLSDLTYRGGEHRPELRYHITDYCGGVHLYPPVS 365


>gi|221233690|ref|YP_002516126.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000]
 gi|220962862|gb|ACL94218.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000]
          Length = 358

 Score =  435 bits (1120), Expect = e-120,   Method: Composition-based stats.
 Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 5/346 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL  A+ L  A L+  E++  ++ ++  Y++A+TP +A LI+P   +DPIARQF+P  E
Sbjct: 18  QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 77

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P E  DPIGD  HSP++GIVHRYPDR+LLK  H C VYCRFCFRREMVG +  + 
Sbjct: 78  ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 137

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+    +AA AYI ++ QIWEVI TGGDPL+LS +RL  ++  L  I HV+I+RFH+RVP
Sbjct: 138 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 197

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
            VDP  + PEL+  LK + K VY+A+HANH  E +  A AA +++ +AG+ ++SQ+VLL+
Sbjct: 198 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 257

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+PE L  LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+  +SGL 
Sbjct: 258 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 317

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
           QP Y+LD+PGG+GKV +  + +         + D    V  YPP +
Sbjct: 318 QPTYVLDIPGGHGKVPVGPNYLSDGA-----VEDPDGAVRPYPPTA 358


>gi|124514855|gb|EAY56366.1| Lysine 2,3-aminomutase [Leptospirillum rubarum]
          Length = 383

 Score =  435 bits (1119), Expect = e-120,   Method: Composition-based stats.
 Identities = 122/323 (37%), Positives = 195/323 (60%), Gaps = 6/323 (1%)

Query: 29  KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
           +E+   + I +     +LI   +P  PI RQ IP  EE+    +   DP+G+++ SP+  
Sbjct: 32  REVEKTFPIRINAYYRSLI--TDPEGPIGRQVIPDPEEVLDF-DSPVDPLGEDSDSPVPA 88

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           IVHRYPDR+L  + + CP+YCR+C R+ M+G+ +G V++  + E  + YI+   ++ +VI
Sbjct: 89  IVHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEG-VVTRGEVEEGIEYIRTHPEVRDVI 147

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            +GGDPL+L    L+ +L  LR I H++++R  SRVP   PQR+ PEL   LK+   P++
Sbjct: 148 LSGGDPLMLKDDYLEFILSGLRKIPHLEVIRIGSRVPSSLPQRVTPELCAMLKKY-HPLF 206

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           + +H NHP E + E+  A + LA+AGI L  Q+VL+KG+ND+  IL  L +  + +R+KP
Sbjct: 207 MNLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKLLTIRVKP 266

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID-THNI 327
           YYL+  DL  G +HFR  +  G +I+  L+   SG+  P +++D PGG GKV I     +
Sbjct: 267 YYLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVPILPPDYL 326

Query: 328 KKVGNGSYCITDHHNIVHDYPPK 350
             + +G   + ++   V+ YP  
Sbjct: 327 VSMEDGDVVLRNYEGNVYTYPDA 349


>gi|284097493|ref|ZP_06385581.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3]
 gi|283830995|gb|EFC35017.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3]
          Length = 340

 Score =  434 bits (1118), Expect = e-120,   Method: Composition-based stats.
 Identities = 134/345 (38%), Positives = 203/345 (58%), Gaps = 10/345 (2%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           +L   T+ + + L  A  +    ++E++ I   + I + P   +LI    P DPI +Q +
Sbjct: 6   RLVRDTVNTPEKLAAAFDVD---LEEMQRIHKEFPIRINPYYLSLIKE--PGDPIWKQVV 60

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   EL  +    EDP+ + + S +  + HRYPDR L  + ++CP+YCRFC R+  VG  
Sbjct: 61  PDPREL--MSTGVEDPLHEEDDSEVPNVTHRYPDRALFYVNYMCPIYCRFCTRKRKVGDP 118

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
               +S  + E  LAYIQ   +I +VI +GGDPL+L+ K++  ++  LR IKH++I+R  
Sbjct: 119 H--SISEDNIETGLAYIQAHPEIRDVIISGGDPLMLTDKKIDMIVGGLRAIKHLEIIRIG 176

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SRVP+  PQRI PEL   LK    P YI  H NHP E + E   A   LA+AGI L +Q+
Sbjct: 177 SRVPVTLPQRITPELCAILKRH-HPFYINTHFNHPREITPETEKACGMLADAGIPLGNQA 235

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+NDDP+++  LM+  + +R+KPYY++  DL  GT HFR  ++ G  IVA+L+  I
Sbjct: 236 VLLKGVNDDPDVMVELMKGLLRIRVKPYYIYQADLVVGTDHFRTAVQTGLDIVAALRGHI 295

Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
           SGL  P Y++D PGG GK+ +  + +    +    + ++   V+ 
Sbjct: 296 SGLGVPHYVVDAPGGGGKIALIPNPVVAFDDDEIQLRNYEGGVYS 340


>gi|162455543|ref|YP_001617910.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
 gi|161166125|emb|CAN97430.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
          Length = 411

 Score =  434 bits (1118), Expect = e-120,   Method: Composition-based stats.
 Identities = 129/355 (36%), Positives = 195/355 (54%), Gaps = 6/355 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNPNDPIARQ 59
            QLRH  L+SA +L+ A  +  E++   +        I +TP   +L +  +P  PI RQ
Sbjct: 58  WQLRH-ALSSADELHGALSLTPEELAGARRAEKAGLPIRVTPYYLSLCDNADPACPIRRQ 116

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P  +E   +P +  DP+G+  H     +V RYPDR LL     C VYCRFC R  MVG
Sbjct: 117 CVPLADESAEVPGDLVDPLGEVAHEVAPHLVQRYPDRALLLATDRCAVYCRFCTRSRMVG 176

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
              G  ++ +    A+AY++   ++ +VI +GGDPL +S  R+ +++  LR I+ V+ +R
Sbjct: 177 D-GGGAVALERLAPAMAYLEAHPEVRDVIVSGGDPLAVSTDRVVRLIARLRQIQSVETIR 235

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             +RVP+  PQRI  EL++ LK    P+++  H NHP E +  A  A  RLA+ G  +++
Sbjct: 236 LATRVPVTLPQRITAELVRALKPY-HPLWVMTHFNHPKELTPAAERACKRLADHGFPVMN 294

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+GINDD   LA L R  V  R++PYYL   D   GT+H R  +  G  ++  L+ 
Sbjct: 295 QTVLLRGINDDATTLATLFRGLVRWRVRPYYLLQMDPVRGTAHLRTPLATGVSLMEQLQG 354

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY--PPKSS 352
           +++G+  P  I+D PGG GKV I    +     G   +  H  +  +Y  PP  S
Sbjct: 355 RLTGIALPKLIVDTPGGMGKVPIGPEYVVDRRPGRTVLRTHRGVEVEYVDPPAGS 409


>gi|158424552|ref|YP_001525844.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571]
 gi|158331441|dbj|BAF88926.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571]
          Length = 375

 Score =  434 bits (1117), Expect = e-120,   Method: Composition-based stats.
 Identities = 167/341 (48%), Positives = 228/341 (66%), Gaps = 1/341 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL +A DL  A L    +   +  +   Y++A+TP +   ++  + +DPIARQF+P   E
Sbjct: 30  TLRTADDLIAAGLAPAAERAVLDAVGARYAVAVTPELVAAMDRTDASDPIARQFVPDVAE 89

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   P+E  DPIGD+ HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG    T L
Sbjct: 90  LRTDPQELVDPIGDDAHSPVPGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETAL 149

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +    E AL Y+    ++WEVI TGGDP ++S +R+  V+  L  I HV+++RFH+RVPI
Sbjct: 150 TPDMLERALGYVAAHPEVWEVILTGGDPFMVSPRRMADVVGRLAAIPHVKVVRFHTRVPI 209

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
             P+R++ E+++ LK  G   Y+A+H NH  E  + A AA+ RLA+AGI LLSQ+VLLKG
Sbjct: 210 AAPERVSEEMVRALKAPGVAAYVAVHVNHARELGDAATAALGRLADAGIPLLSQTVLLKG 269

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  E L  L R  VE R+KPYYLHHPDLA GT HFRL++ EGQ +V +L+ ++SG+ Q
Sbjct: 270 VNDRVETLDALFRALVERRVKPYYLHHPDLAPGTGHFRLSVPEGQALVRALRGRLSGIAQ 329

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           P Y+LD+PGG GKV +    +   G G + + D+   +H Y
Sbjct: 330 PTYVLDIPGGAGKVPLTPGYLTPQGAG-WHVADNCGGIHAY 369


>gi|83814229|ref|YP_445259.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM
           13855]
 gi|83755623|gb|ABC43736.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM
           13855]
          Length = 401

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 117/350 (33%), Positives = 192/350 (54%), Gaps = 5/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + SA+ L        ++   IK   + +   +TP  A+L+ P +P+ P+ RQ 
Sbjct: 21  WQMQNR-IHSAEALRKWIRPTDDERAAIKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQA 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E      +  DP+ +  H P+K ++H Y DR+   +   C +YCR+C R+ MVG 
Sbjct: 80  VPTMDEFGPDIVDELDPLDETGHEPVKNLIHNYEDRVAFCVTAECAIYCRYCLRKRMVGD 139

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                + + + +AA+ YI    +I +V+ TGGDPL  +   L+ +L  LR I HV+++RF
Sbjct: 140 -AEYFMRTDEHQAAIDYIAAHDEIRDVLLTGGDPLTFNEANLEWLLSRLRAIDHVELIRF 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR+P+  P RI  +L   L +   P++I  H NHP E + +A AAI RL +AGI + +Q
Sbjct: 199 GSRMPVKLPYRITDDLCDLLAQY-HPLWINTHFNHPKECTGDAAAAIGRLKDAGIPVGNQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+NDDP+ +  L    V +R++PYYL+   +  GT H R  IE G  I+  L+ +
Sbjct: 258 TVLLRGVNDDPDTMKALNEGLVRMRVRPYYLYQAQIIGGTGHLRTPIEVGMHIMRQLRGR 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SG   P Y+LD P  +GKV ++   +K        +  +   +   P  
Sbjct: 318 TSGFAIPDYVLDTP--HGKVPLNRSYVKGRAGDHVLMESYDGTLWAEPNP 365


>gi|320161902|ref|YP_004175127.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1]
 gi|319995756|dbj|BAJ64527.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1]
          Length = 446

 Score =  434 bits (1117), Expect = e-119,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 198/347 (57%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL H+ L S +D      + + +   +      + + +TP   +LINP +P+DPI +Q 
Sbjct: 28  WQLSHR-LNSVEDFEQVLRLTESERKALT-TQGLFRVDITPYFVSLINPDDPDDPIRKQV 85

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP+ EE+       ED + ++ HSP+ G+VHRYPDR+L+ +   C  YCR+C R  +VG 
Sbjct: 86  IPRAEEIVPFTGMMEDSLAEDRHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 145

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T  S  + E  + Y++   Q+ +V+ +GGDPL L+ K L+++L  LR I+H++I+R 
Sbjct: 146 PSAT-FSRAEFEMQIEYLKRTPQVRDVLLSGGDPLTLAPKLLEELLSRLREIEHIEIIRI 204

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SRVP+  PQRI  E    + +   PV++ IH NHP E ++E   A  RL  AG+ L +Q
Sbjct: 205 GSRVPVFLPQRITQEFCDMVSKY-HPVWMNIHVNHPNEITQELADACDRLTRAGVPLGNQ 263

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL G+ND   +   L++  V +R++PYYL+  DL  G  HFR  + +G +I+  L+  
Sbjct: 264 SVLLAGVNDCVHVQRKLVQDLVRIRVRPYYLYQCDLVEGAGHFRTPVAKGIEIIEGLRGH 323

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG   P Y++D PGG GK+ +  + +  + +    + ++   +  Y
Sbjct: 324 TSGYAVPTYVVDAPGGGGKIPVMPNYLISMSDHKIILRNYEGYITTY 370


>gi|114566648|ref|YP_753802.1| lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337583|gb|ABI68431.1| L-lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 422

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 121/353 (34%), Positives = 190/353 (53%), Gaps = 5/353 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQ 59
            Q+R++ +     L +   + + ++  IK +S     A++P   +LI+  N    PI +Q
Sbjct: 74  WQMRNR-INDGNVLASILGLNEFEVQTIKRVSKKVRWAISPYYLSLIDFENYAASPIYKQ 132

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E+     E +DP+G+   SP   I  RYPDR+++ + + C +YCR C RR   G
Sbjct: 133 SVPSLHEIIECKGE-DDPMGEEMSSPAPRITRRYPDRLIINVTNQCAMYCRHCQRRRNFG 191

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            +     + KD EAAL YI+  S+I +V+ TGGD L+LS + L  +L  L  I HV+I R
Sbjct: 192 -ETDNHAAHKDLEAALQYIKNNSEIRDVLITGGDALMLSDRTLDWLLGELDAISHVEIKR 250

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             +R P+  PQRI   L   LK    P+YI    N P E + EA  A  RL  AG++L +
Sbjct: 251 IGTRTPVTLPQRITANLCAVLKRH-TPIYINTQFNSPLEVTPEAKQACDRLIEAGVVLGN 309

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLKGIND+  ++  L +  +++R++PYYL       GT+HF   +  G  I+  L+ 
Sbjct: 310 QAVLLKGINDNVHVMKKLNQELLKIRVRPYYLFQAKEVKGTTHFISPVNTGLDIMKHLRG 369

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
             SGL  P Y+++ PGGYGK  ++   +  +      I+       +YP +++
Sbjct: 370 YTSGLAIPTYVINAPGGYGKTPVNPEYVLDINENEVIISTWQGKTFNYPHRNN 422


>gi|163782523|ref|ZP_02177520.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882096|gb|EDP75603.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 378

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 122/350 (34%), Positives = 212/350 (60%), Gaps = 8/350 (2%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + S ++L     + +E+++ I+     Y +A+TP   +L++P +  DPI  Q 
Sbjct: 28  WQIRNR-IKSLEELQRYVRLTEEEVEGIRLTQGLYPLAITPYYLSLMDPDDTEDPIRLQA 86

Query: 61  IPQKEELNILP--EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           IP++ E++         D + +     + G+ HRYPDR+L+ +   C VYCR C R+ + 
Sbjct: 87  IPRRIEVDEEAQSAGEPDALREEGD--IPGLTHRYPDRVLMSVTTFCAVYCRHCMRKRIF 144

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            ++     + ++ +  L+YI+E  ++ +V+ +GG+PL LS+++++ +LK LR IKHV+I+
Sbjct: 145 -AEGERARTKEEIDRMLSYIREHEEVRDVLISGGEPLSLSNEKIEYILKGLREIKHVEIV 203

Query: 179 RFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           RF +R+P++ PQR  + EL+  L++   P++I  H NHP E +E A  A+ RL   GI +
Sbjct: 204 RFGTRLPVLAPQRFFDEELLSILEKYS-PIWINTHFNHPKEVTELAEEAVDRLLRHGIPV 262

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLLKG+ND+PEI+ +L R  + +++KP YL H D   G  HFR T+++G +I+  L
Sbjct: 263 NNQTVLLKGVNDNPEIMLSLFRKLLRIKVKPQYLFHCDPIRGAVHFRTTVDKGLEIMRFL 322

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           + KISG+  P Y +DLPGG GKV +  + +      S+        + +Y
Sbjct: 323 RGKISGMGIPTYAVDLPGGKGKVPLQPNYVVGREGNSFLFESFTGELVEY 372


>gi|256829555|ref|YP_003158283.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
           baculatum DSM 4028]
 gi|256578731|gb|ACU89867.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
           baculatum DSM 4028]
          Length = 411

 Score =  434 bits (1116), Expect = e-119,   Method: Composition-based stats.
 Identities = 123/351 (35%), Positives = 193/351 (54%), Gaps = 11/351 (3%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINP-HNPNDPIARQ 59
            QL+H+ +TS Q +     +        ++       A TP          + ++ + R 
Sbjct: 60  WQLKHR-VTSVQAMAGILGVDA---PVFEKSRRRLPAAATPYYL----WVASRSEALRRC 111

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E  +LP E  DP+G+  HSP+ GIVHRYPDR+L  +   C  YCR+C R  +VG
Sbjct: 112 ILPDVRETQVLPFETSDPLGEEGHSPVPGIVHRYPDRVLFLVTEFCSTYCRYCTRSRLVG 171

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            + G     +  + AL YI++  ++ +V+ +GGDPL L   +++ +L  LR I HV+I+R
Sbjct: 172 -KAGHRSDMRSWQVALDYIRQHDEVRDVLLSGGDPLTLPAMKIEWLLSQLRAIPHVEIVR 230

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             S+VP V PQRI P L++ L+    P++I++H  HP E + +   A +RLA+ GI L S
Sbjct: 231 IGSKVPAVLPQRITPNLVRMLRRY-HPLFISLHFTHPDEITPDTALACNRLADGGIPLGS 289

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL G+NDD E +  LM   V  R++PYY++  D   G+SHFR  ++ G  I+  L+ 
Sbjct: 290 QTVLLSGVNDDVETMKRLMHGLVRNRVRPYYMYQCDPIPGSSHFRTPVDTGLSIIQGLRG 349

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
             SG C P Y++D PGG GKV +     +        + ++ + +  YP +
Sbjct: 350 HTSGYCIPTYVIDAPGGGGKVPLQPGYFQGRDEQGVVLRNYEDRIFHYPDQ 400


>gi|288817647|ref|YP_003431994.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6]
 gi|288787046|dbj|BAI68793.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6]
 gi|308751245|gb|ADO44728.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobacter
           thermophilus TK-6]
          Length = 367

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 124/348 (35%), Positives = 207/348 (59%), Gaps = 4/348 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ L + +D+     +  E+++ I+     Y +A+TP   +LI P +PNDPI  Q 
Sbjct: 18  WQIKNR-LKTREDIQKYIKLLPEEVEGIERTKGIYPLAITPHYFSLIEPEDPNDPIRLQC 76

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP++EE++   +   +P        + G+ HRY DR+LL +   C VYCR C R+ +  +
Sbjct: 77  IPRREEVDENAQRLGEPDPFREEGQVPGLTHRYRDRVLLSVTTFCAVYCRHCMRKRIF-A 135

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q     S+++    + YI+E  +I +V+ +GG+PL LS+++L+ +L  LR IKHV+I+RF
Sbjct: 136 QGERSRSTEELRKMIEYIKEHEEIRDVLISGGEPLSLSYEKLEYLLSQLRKIKHVEIIRF 195

Query: 181 HSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            +R+ ++ PQR  + +L+  L++   P++I  H NHP E +EEA  A+ RL   GI + +
Sbjct: 196 GTRLLVLAPQRFFDNKLLDILEKYS-PIWINTHFNHPKEITEEAEEAVERLLRRGIPINN 254

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLKG+ND+P+ +  L R  + +++KP YL H D   G  HFR +I++G +I+  L+ 
Sbjct: 255 QTVLLKGVNDNPQTMLELFRGLLRIKVKPQYLFHCDPVKGAVHFRTSIDKGLEIMEYLRG 314

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           +ISG+  P Y +DLPGG GKV +  + I       +        V +Y
Sbjct: 315 RISGMGIPTYAVDLPGGKGKVPLMPNYIINREGDKFTFRSPFGDVVEY 362


>gi|310778246|ref|YP_003966579.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926]
 gi|309747569|gb|ADO82231.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926]
          Length = 418

 Score =  433 bits (1114), Expect = e-119,   Method: Composition-based stats.
 Identities = 122/347 (35%), Positives = 188/347 (54%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL ++ ++  + L     + +++ +EIK +   Y  A++P  A LI+P N  D I    
Sbjct: 64  WQLINR-ISDIETLSLIVNLTEKEKEEIKNVGATYRWAISPYYAALIDPENKYDSIRLLS 122

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E    PE   DP+G+   +P   I  RYPDR+++   + C +YCR C RR  +G 
Sbjct: 123 VPTGSE-AAHPEGEVDPMGEEFTNPAGSITRRYPDRLIINTTNECAMYCRHCQRRRNIG- 180

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  T  S      ++ YI+   +I +V+ TGGD L LS KRL+ +LK L+ I HV  +R 
Sbjct: 181 ETDTHKSDAVIMESIDYIRNNPEIRDVLLTGGDVLCLSDKRLEWILKELKSIPHVDYIRL 240

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQRI  EL+  LK+  +P+YI  H NHP E + E   A  +LAN GI L +Q
Sbjct: 241 GTRTLVTMPQRITDELVDMLKKY-QPIYINTHFNHPKEITPEVKEACDKLANGGISLGNQ 299

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL GIN+D  ++  L    +++R++PYY+ H     GT HF  ++++G +I+  L+  
Sbjct: 300 AVLLNGINNDKYVMRLLNHEMLKIRVRPYYIFHAKHVKGTLHFNTSVDDGIEIMEYLRGY 359

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG+  P YI++ P G GK  I    +      S  I     +V DY
Sbjct: 360 TSGMAIPTYIINAPKGQGKTPIMPQYLLSRSKNSVKIRTWEGVVIDY 406


>gi|289548297|ref|YP_003473285.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM
           14484]
 gi|289181914|gb|ADC89158.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM
           14484]
          Length = 367

 Score =  432 bits (1111), Expect = e-119,   Method: Composition-based stats.
 Identities = 120/349 (34%), Positives = 200/349 (57%), Gaps = 6/349 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + +  +L     +  E+ + I+     Y +A+TP   +LI+PH+P DPI  Q 
Sbjct: 18  WQIQNR-IKTIHELTRYIKLLPEEEEGIRRTQGLYPMAITPYYLSLIDPHDPQDPIRLQA 76

Query: 61  IPQKEELNIL--PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           IP+  E +        ED + +     +  + HRYPDR+L+++   C VYCR C R+ + 
Sbjct: 77  IPRAIETDPYVQSYGEEDALREEGQ--IPHMTHRYPDRVLVRVTTFCAVYCRHCMRKRIF 134

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            SQ    ++ ++ +  + YI+    + +V+ +GGDPL LS+++L+ +L  LR I HV+I+
Sbjct: 135 -SQGERSITKEEIDTIIQYIEAHPSVRDVLLSGGDPLSLSYEKLEYILSRLRRIPHVEII 193

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  +R+P++ PQR   E +  L E   P++I  H NHP E +  A  A+  L   GI + 
Sbjct: 194 RIGTRLPVLAPQRFFDEKLLKLLERYSPIWINTHFNHPKEITPYAAEAVENLLRHGIPVN 253

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKG+NDDP+++  LMR+ + +++KP YL H D   G  HFR ++E+G +I+  L+
Sbjct: 254 NQTVLLKGVNDDPQVMLELMRSLLRIKVKPQYLFHCDPIKGAIHFRTSLEKGLEIMDFLR 313

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            KISG+  P Y +DLPGG GKV +    + +     Y        + +Y
Sbjct: 314 GKISGMGIPTYAVDLPGGKGKVPLLPSYLVRKEGNRYTFRSFTGELVEY 362


>gi|83310383|ref|YP_420647.1| lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1]
 gi|82945224|dbj|BAE50088.1| Lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1]
          Length = 344

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 169/343 (49%), Positives = 230/343 (67%), Gaps = 6/343 (1%)

Query: 5   HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
            +TL +AQDL++A LI    ++ +  ++  Y++ALTP + +LI+P +P DPIARQ++P  
Sbjct: 4   RRTLRTAQDLHDAGLIPS--VEAVAGVAEAYAVALTPAVVDLIDPADPADPIARQYVPSA 61

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           EEL   PEE  DPIGD  +SP+KG+VHRYPDR+LL  L VCPVYCRFCFRR  VG     
Sbjct: 62  EELVTTPEELADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVGD-GDA 120

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            ++  + + ALAY+  + +I EVI TGGDPL+L   RL  +L  +  I HV+++R HSRV
Sbjct: 121 TMTEAEIDTALAYVAGRPEIREVILTGGDPLMLPPPRLAALLGRIGAIAHVELIRIHSRV 180

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+ DP+R+ P+L + L    KPV++A+H NHP+E S  A   + RLA  G+ LLSQ+VLL
Sbjct: 181 PVSDPERVTPDLARVLGGGDKPVWLAVHVNHPHELSPLARGGLERLARTGVPLLSQTVLL 240

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           KG+ND   +L  L R  V  R++PYYLHHPDLA GTSHFR TIEEGQ ++ SL+ ++SG+
Sbjct: 241 KGVNDSVSVLDELFRALVRNRVRPYYLHHPDLAPGTSHFRPTIEEGQALMRSLRGRLSGI 300

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            QP Y+LD+PGG GKV +              + D    +HDY
Sbjct: 301 AQPTYVLDIPGGAGKVPVGPQYWDGEAG---TVADPGGRLHDY 340


>gi|316934333|ref|YP_004109315.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
           palustris DX-1]
 gi|315602047|gb|ADU44582.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas
           palustris DX-1]
          Length = 363

 Score =  431 bits (1110), Expect = e-119,   Method: Composition-based stats.
 Identities = 180/350 (51%), Positives = 246/350 (70%), Gaps = 4/350 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL   ++L        +    + E++  Y+IA+TP +A LI+  +P+DPIARQ+IP+ EE
Sbjct: 14  TLRHPEELIAEGFAAADGRATLTEVAARYAIAVTPAVAALIDRDDPDDPIARQYIPRAEE 73

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+ L  ER+DPIGD  H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG  K   L
Sbjct: 74  LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S + T AAL YI+   +IWEVIFTGGDPL+LS +RL +++  L  I+HV+I+RFH+R+P+
Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP RI P+L+Q L+   K  ++A+HANHP EF+  A  A +R+ +AGI ++SQSVLL+G
Sbjct: 194 ADPTRITPDLVQALRTPSKTTWLALHANHPREFTAAARVACARIIDAGIPMVSQSVLLRG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDDP+ L  LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+  +SGLCQ
Sbjct: 254 VNDDPDTLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKSS 352
           P Y+LD+PGGYGK  +  + +        N  Y + D+   VH YPP+S 
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLLDADGTDPNSRYRVADYCGEVHLYPPRSG 363


>gi|258513920|ref|YP_003190142.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257777625|gb|ACV61519.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 432

 Score =  431 bits (1108), Expect = e-118,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 201/347 (57%), Gaps = 5/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ H+ +   + L +   + +E+  +I+++   +  +++P  A+LI P + NDP+  Q 
Sbjct: 74  WQISHR-INDVELLSSLIQLSEERCAQIRKVGLKFRWSVSPYYASLIVPDSLNDPVMLQS 132

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +EL++      DP+ +   SP   I  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 133 VPSIKELDVSGY--ADPMAEELTSPAPCITRRYPDRLIINVTNKCAMYCRHCQRRRGIGD 190

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                 + +D  AAL YI++  +I +V+ TGGD L+LS K++  +L  L  IKHV+I R 
Sbjct: 191 -VDRHQTHQDLLAALDYIRKNKEIRDVLITGGDALLLSDKKIDWLLSELDSIKHVEIKRL 249

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQRI PEL + LK+   PVYI    NHP E + E+  A   L +AG++L +Q
Sbjct: 250 GTRTIVTLPQRITPELCEVLKQHP-PVYINTQFNHPQEITPESKLACDMLVSAGVVLGNQ 308

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGIN++P ++  L +  +++R++PYY+ H     GT HF  ++ EG +I+  L+  
Sbjct: 309 AVLLKGINNNPHVMKKLNQELLKIRVRPYYIFHAKQVIGTRHFITSVNEGIEIMEKLRGY 368

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P YI++ P GYGK+ I    +  + N S  + +  N   DY
Sbjct: 369 TSGLAVPTYIINAPNGYGKIPILPKYLLGIDNSSVRLRNWENRQIDY 415


>gi|197118777|ref|YP_002139204.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem]
 gi|197088137|gb|ACH39408.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem]
          Length = 344

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 129/343 (37%), Positives = 197/343 (57%), Gaps = 11/343 (3%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TS ++L     +   Q      +   Y + +TP    LI    P DPI RQ +P   EL
Sbjct: 12  ITSPEELSGLFRL---QGGAFSPVVERYPMRITPYYLGLI--EEPGDPIWRQCVPDPAEL 66

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           + L  +  DP+ +   SP+ G++HRYPDR++  +   C VYCRFC R+  VG      ++
Sbjct: 67  DDL-TQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGC---ASMA 122

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
               + A+AYI    +I +V+ +GGDPL+L   RL  +L  L  I HV+I+R  +R P+ 
Sbjct: 123 PAKVDDAIAYIAGDPRIRDVVLSGGDPLLLPDDRLAAILSALSRIPHVEIVRIGTRAPVT 182

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P+RI P L + LK +  PVY+  H NHP E + ++  A +RLA+AG+ L +Q+VLLKG+
Sbjct: 183 LPERITPGLTRLLKRS-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTVLLKGV 241

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           NDDP+ + +LMR  + +R++PYY+H  DL  GT+HFR  + +G  ++ +L+   SGL  P
Sbjct: 242 NDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVGQGISVMQALRGHTSGLAVP 301

Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            Y++DLPGG GKV +        G  +   T++     +YP  
Sbjct: 302 HYVIDLPGGKGKVDV-LSGRPGSGGRTLLFTNYLGEEIEYPEP 343


>gi|92117823|ref|YP_577552.1| hypothetical protein Nham_2300 [Nitrobacter hamburgensis X14]
 gi|91800717|gb|ABE63092.1| L-lysine 2,3-aminomutase [Nitrobacter hamburgensis X14]
          Length = 366

 Score =  430 bits (1107), Expect = e-118,   Method: Composition-based stats.
 Identities = 180/354 (50%), Positives = 242/354 (68%), Gaps = 10/354 (2%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL   +DL    L     + ++  ++  Y+IA+TP +A+LI+P +P+DPIARQ++P  +E
Sbjct: 12  TLRQPEDLIAHGLAPAAALPDLARVAARYAIAVTPEVASLIDPDDPDDPIARQYLPSVDE 71

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   P ER DPIGD  HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K T L
Sbjct: 72  LAAQPGERADPIGDRAHSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETAL 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S     AAL YI+   ++WEVI TGGDPL+LS +RL +++  L  I HV+I+R HSRVP+
Sbjct: 132 SKSAATAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAGIGHVKIVRIHSRVPV 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP R++ E++  LK AG   ++A+HANHP E +  A +A +R+ +AGI ++SQSVLL+G
Sbjct: 192 ADPTRVSDEMVAALKAAGATTWLALHANHPRELTAAARSACARIVDAGIPMVSQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMR FVE RIKPYYLHH DLA GT+H R T+E+G+ ++ +L+ ++SGLCQ
Sbjct: 252 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEQGRALMRALRGRVSGLCQ 311

Query: 307 PFYILDLPGGYGKVKIDTHNI----------KKVGNGSYCITDHHNIVHDYPPK 350
           P Y+LD+PGGYGK  +    +          +      Y I D+   VH YPPK
Sbjct: 312 PDYVLDIPGGYGKSPVGPDYLSQSDLTFGEGEHRPESRYRIVDYCGGVHLYPPK 365


>gi|307322539|ref|ZP_07601885.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
           AK83]
 gi|306891821|gb|EFN22661.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti
           AK83]
          Length = 377

 Score =  430 bits (1106), Expect = e-118,   Method: Composition-based stats.
 Identities = 122/362 (33%), Positives = 191/362 (52%), Gaps = 17/362 (4%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL + ++T+ ++L     +  E+ +   ++S  Y   +TP   +LIN  + NDP+  Q 
Sbjct: 17  WQLAN-SVTTIEELKLYVNVSPEEEEAFHQVSERYGFRVTPYYLSLINKEDRNDPVRLQA 75

Query: 61  IPQKEELNIL------------PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
           +P   EL  L              + E+P+     + +  IVHRYPDR+L  L + C  Y
Sbjct: 76  VPDIRELQDLFHVEQLPSFHRSAVDSENPLWKEGRTDVGCIVHRYPDRVLFHLTNFCATY 135

Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           CR C R+   G Q          +  +AYI E+ +I +V+ +GGDPL L   +L+ VL  
Sbjct: 136 CRHCSRKVHAG-QGSIATDRTQIDEGIAYIAERPEIRDVLLSGGDPLTLPDSKLEYVLSR 194

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
           LR + HVQI+R  +R P+  PQRI  E  + +K+   P++I  H NHP E + EA  AI 
Sbjct: 195 LRQLPHVQIIRIGTRTPVTMPQRITSEFCRMVKKY-HPIWINTHFNHPNEITPEAKTAIE 253

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
           RL  AG+ + +QSVLLKGIND  E++  L+   +  R++PYYL+H DL  G  HFR +I+
Sbjct: 254 RLLEAGVPVGNQSVLLKGINDTVEVMKELVHQLLIARVRPYYLYHADLVRGAEHFRTSID 313

Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            G  I+ +L+   +G   P Y++  P   GK  ++ + +   G G   + ++       P
Sbjct: 314 VGMHIIENLRGHTTGFAVPQYVICTP--LGKTPLNPNYVIATGPGYIVLRNYEWRTWRDP 371

Query: 349 PK 350
            +
Sbjct: 372 DR 373


>gi|294507125|ref|YP_003571183.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8]
 gi|294343453|emb|CBH24231.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8]
          Length = 401

 Score =  429 bits (1104), Expect = e-118,   Method: Composition-based stats.
 Identities = 116/350 (33%), Positives = 192/350 (54%), Gaps = 5/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + SA+ L        ++   IK   + +   +TP  A+L+ P +P+ P+ RQ 
Sbjct: 21  WQMQNR-IHSAEALRKWIHPTDDERAAIKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQA 79

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E      +  DP+ +  H P+K ++H Y DR+   +   C +YCR+C R+ MVG 
Sbjct: 80  VPTMDEFGPDIVDELDPLDETGHEPVKNLIHNYEDRVAFCVTAECAIYCRYCLRKRMVGD 139

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                + + + +AA+ YI    +I +V+ TGGDPL  +   L+ +L  LR I HV+++RF
Sbjct: 140 -AEYFMRTDEHQAAIDYIAAHDEIRDVLLTGGDPLTFNEANLEWLLSRLRAIDHVELIRF 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR+P+  P RI  +L   L +   P++I  H NHP E +++A AAI RL +AGI + +Q
Sbjct: 199 GSRMPVKLPYRITDDLCDLLAQY-HPLWINTHFNHPKECTDDAAAAIGRLKDAGIPVGNQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+G+NDDP+ +  L    V +R++PYYL+   +  GT H R  IE G   +  L+ +
Sbjct: 258 TVLLRGVNDDPDTMKALNEGLVRMRVRPYYLYQAQIIGGTGHLRTPIEVGMHTMRQLRGR 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SG   P Y+LD P  +GKV ++   +K        +  +   +   P  
Sbjct: 318 TSGFAIPDYVLDTP--HGKVPLNRSYVKGRAGDHVLMESYDGTLWAEPNP 365


>gi|146340545|ref|YP_001205593.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278]
 gi|146193351|emb|CAL77367.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278]
          Length = 364

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 180/358 (50%), Positives = 238/358 (66%), Gaps = 10/358 (2%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R  TL SA DL    L    +   ++ ++  Y++A+T  +A+LI+  +P+DPIARQF+P 
Sbjct: 6   RPTTLRSAADLVAQGLADPGEQATLERVAQRYAVAVTTHLADLIDSDDPDDPIARQFVPS 65

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
            +EL   P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K 
Sbjct: 66  ADELVGAPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
             LS      AL YI+   +IWEVI TGGDPL+LS +RL +++  L  I+HV+I+R H+R
Sbjct: 126 NALSEDAYCGALDYIRAHGEIWEVILTGGDPLMLSPRRLAEIMADLAAIEHVRIIRIHTR 185

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           +P+ DP RI P L++ LK  G  +++A+HANHP E S +  AA +RL +AGI L+SQSVL
Sbjct: 186 LPVADPARITPGLVEALKVKGAAIWVALHANHPRELSPDVRAACARLVDAGIPLVSQSVL 245

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+NDD   L  LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ ++SG
Sbjct: 246 LRGVNDDAATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLAEGQALIRALRGRVSG 305

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVG----------NGSYCITDHHNIVHDYPPKS 351
           LCQP Y+LD+PGGYGK  +    I                 Y + D+    H YPP  
Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYITAEESVAQDHAAAAQTRYRVVDYCGEAHLYPPAG 363


>gi|222055869|ref|YP_002538231.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32]
 gi|221565158|gb|ACM21130.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32]
          Length = 347

 Score =  429 bits (1103), Expect = e-118,   Method: Composition-based stats.
 Identities = 134/348 (38%), Positives = 201/348 (57%), Gaps = 11/348 (3%)

Query: 1   MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q   KT +T+  +L     +  E   +I +++  Y + +T     LI    P D I RQ
Sbjct: 4   WQKNLKTCVTAPDELSPLFNLDTE---DIAQVAKRYPMRITRYYLGLIER--PGDAIWRQ 58

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            IP   E      + EDP+ +   SP+ G++HRYPDR++  +  VC VYCRFC R+  VG
Sbjct: 59  CIPDPLEFEDQA-QMEDPLDEELLSPVPGLIHRYPDRVVWLVSSVCAVYCRFCMRKRRVG 117

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             + T   ++  +A LAYI    +I +VI +GGDP +L    L+++L  LR I HV+I+R
Sbjct: 118 CTEATETGTR--QAVLAYIANHPEIRDVILSGGDPFLLEDDVLEEILSGLRQIHHVEIIR 175

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             +R  +  P+RI   L + LK+   P+Y+  H NHP E +  +  A +RLA+AGI L +
Sbjct: 176 IGTRTTVTLPERITTGLCRMLKKF-HPIYVNTHFNHPKEITAASARACARLADAGIPLGN 234

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLKGINDDP+++  LM+  +++R+KPYYLH  DL  GT+HFR +I+ G +I+  L+ 
Sbjct: 235 QTVLLKGINDDPQVMKRLMQLLLKIRVKPYYLHQMDLVRGTAHFRTSIDRGLQIMEGLRG 294

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             SGL  P+Y +DL GG GKV +    + +  + S  I  +   V  Y
Sbjct: 295 HTSGLASPYYAIDLEGGKGKVPLLPEYV-RRDDDSLLIRSYRGEVVRY 341


>gi|169831230|ref|YP_001717212.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638074|gb|ACA59580.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 419

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 123/350 (35%), Positives = 186/350 (53%), Gaps = 4/350 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R + +T+ + L     + ++ I +I ++S  Y  A++P  A ++       PI  Q 
Sbjct: 73  WQMRKR-ITTVEVLARFMELNRDDIHDIDKVSRQYRWAVSPYYAAVMAVGGVKGPIWAQA 131

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E+        DP+ +   SP+ GI  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 132 VPSTAEITDARG-TTDPMAERLTSPVPGITRRYPDRLIINVTNQCAMYCRHCQRRRNIG- 189

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +       +  EAAL YI+E  +I +V+ TGGD L+LS   L  +L  L  I HV+I R 
Sbjct: 190 EVDRHQPRRVLEAALQYIRENPEIRDVLITGGDALLLSDTVLDWLLGELHSIPHVEIKRL 249

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQRI   L   L+    P+YI    NHP E + EA+ A  RL  AG++L +Q
Sbjct: 250 GTRALVTLPQRITAGLCAVLERYP-PIYINSQFNHPLEVTPEAVQACDRLVRAGVVLGNQ 308

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGIN+DP ++  L    +  R++PYY+ H     GTSHF   +EEG  I+  L+  
Sbjct: 309 AVLLKGINNDPHVMKKLNHELLRARVRPYYIFHAKPVRGTSHFITPVEEGLAIMEQLRGY 368

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SGL  P YI++ PGGYGK  +    +    +    +    N V  YP +
Sbjct: 369 TSGLAVPTYIINAPGGYGKTPVTPSYVVDHNDQRLVLRTWENRVLPYPNR 418


>gi|168699149|ref|ZP_02731426.1| lysine 2,3-aminomutase YodO family protein [Gemmata obscuriglobus
           UQM 2246]
          Length = 481

 Score =  428 bits (1101), Expect = e-118,   Method: Composition-based stats.
 Identities = 119/349 (34%), Positives = 198/349 (56%), Gaps = 4/349 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q ++ ++ S + L        E+++ + E+ + Y +A+ P   +LI+P +PNDPI  Q 
Sbjct: 50  WQTQN-SIRSVRQLRTLLSFTPEELEALGELESEYKLAIPPYFFSLIDPEDPNDPIRLQS 108

Query: 61  IPQKEELNILPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
           +P   E         +DP+ +   SP+ G+ HRY DR LL     C +YCR+C R+    
Sbjct: 109 VPSPLEAESASGHELDDPLEEEKDSPVPGLTHRYSDRALLVTTPNCTMYCRYCTRKRATL 168

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           ++ G    S D E  + Y++E  +I +VI +GGDPL L   +L+  L++L+ +KHV ++R
Sbjct: 169 TRGGWEGVSADDERMIQYVREHREIKDVIVSGGDPLTLPMGKLRYYLESLKAMKHVDVIR 228

Query: 180 FHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
             +RVP+  PQR+ +PELI  L  A K VY+  H NHP E + EA+ A   L  AG+ + 
Sbjct: 229 VGTRVPVTLPQRLYDPELIDLLGSAEK-VYVQTHFNHPREVTPEAVRACKSLLRAGVPIN 287

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           + +VLLKG+NDD   + +L R  +  +++PYYL H D   G  HFR ++ +G +I+  L+
Sbjct: 288 NHTVLLKGVNDDVGTMRSLFRALLRAKVRPYYLFHCDPVTGAGHFRTSVWKGLEIMEGLR 347

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             +SG+  P Y++D P G GK+ I  + +  + +    + ++  ++  Y
Sbjct: 348 GHMSGIGIPTYVVDGPQGSGKIPILPNYLISMSDDVVVLRNYEGMIVRY 396


>gi|23014062|ref|ZP_00053900.1| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 343

 Score =  427 bits (1098), Expect = e-117,   Method: Composition-based stats.
 Identities = 170/346 (49%), Positives = 231/346 (66%), Gaps = 6/346 (1%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           +R  TL +AQDL +A LI+      +++++  Y++ LTP + +LI+P +P DPIARQ++P
Sbjct: 4   VRRHTLRTAQDLLDAGLIRDA--AAVEQVARTYAVGLTPAVVDLIDPADPADPIARQYVP 61

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
             EEL    EER DPIGD  +SP+KG+VHRYPDR+LL  L VCPVYCRFCFRR  VG   
Sbjct: 62  SPEELTTTAEERADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVGD-G 120

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
              ++  + EAALAY+  +  I EVI TGGDPL+L   RL  +L  +  I HV+++R HS
Sbjct: 121 EATMTEAEIEAALAYVACRPDIREVILTGGDPLMLPAPRLGALLDRIGAIGHVELIRIHS 180

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           RVP+ DP RI P+L   L    KPV++A+H NHP E S  A A +S LA AG+ LLSQ+V
Sbjct: 181 RVPVSDPGRITPDLATVLGGGDKPVWLAVHVNHPREVSPLASAGLSMLARAGVPLLSQTV 240

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKG+ND  ++L +L R  +  R++PYYLHHPDLA GTSHFR +I+EGQ ++  L+ ++S
Sbjct: 241 LLKGVNDRADVLDDLFRALIRNRVRPYYLHHPDLAPGTSHFRPSIKEGQALMRVLRGRLS 300

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           G+ QP Y+LD+PGG GKV +              + D ++  H YP
Sbjct: 301 GIAQPTYVLDIPGGAGKVPVGPGYWDGEEG---VVIDPNDAEHSYP 343


>gi|144898375|emb|CAM75239.1| Protein of unknown function DUF160 [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 353

 Score =  426 bits (1097), Expect = e-117,   Method: Composition-based stats.
 Identities = 161/345 (46%), Positives = 228/345 (66%), Gaps = 5/345 (1%)

Query: 5   HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
            ++L    DL  A L+ + Q   +  ++    IA+TP +A+LI+  +  DPIARQ++P  
Sbjct: 12  SRSLRRVDDLIGAGLVDESQRAALDAVARSSVIAITPAVADLIDAGDAADPIARQYVPNA 71

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            EL++  EER DPIGD+  SP+KG+VHRYPDR LLK + VCPVYCRFCFRRE VG   GT
Sbjct: 72  AELHVAAEERADPIGDDAFSPVKGVVHRYPDRALLKPILVCPVYCRFCFRREAVGDADGT 131

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            LS+ + + ALAY+  ++ + E+I TGGDPL+L+  RL  ++  +  + H+++LRFHSRV
Sbjct: 132 -LSAAELDEALAYLAGQTDLREIIVTGGDPLMLNAARLADLVARIAQLPHIEVLRFHSRV 190

Query: 185 PIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           P+ DP+R++  +   LK      V++++H NHP E S  A  A+ RLA+AG+ L+SQSVL
Sbjct: 191 PVADPERVSSAMASALKSTETLAVWVSVHVNHPRELSAIAGKALRRLADAGVPLVSQSVL 250

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           LKG+NDDP +L  L R  +  R++PYYLHHPDL  GTSHFR ++ EGQ I+ +L+ ++SG
Sbjct: 251 LKGVNDDPAVLEELFRALIRNRVRPYYLHHPDLTRGTSHFRPSLAEGQAIMRALRGRLSG 310

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           + QP Y+LD+PGG GKV +              +TD     H YP
Sbjct: 311 IAQPTYVLDIPGGAGKVPVGPDW---WDGERLQVTDWRGRRHPYP 352


>gi|253700443|ref|YP_003021632.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21]
 gi|251775293|gb|ACT17874.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21]
          Length = 344

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 129/343 (37%), Positives = 195/343 (56%), Gaps = 11/343 (3%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +TS ++L     +   Q  +   +   Y + +TP    LI      DPI RQ +P   EL
Sbjct: 12  ITSPEELSGLFRL---QGRDFSPVVERYPMRITPYYLGLIEEQG--DPIWRQCVPDPAEL 66

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
              P +  DP+ +   SP+ G++HRYPDR++  +   C VYCRFC R+  VG      ++
Sbjct: 67  CD-PSQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGC---ASMA 122

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
               + A+AYI    +I +V+ +GGDPL+L    L  +L  L  I HV+I+R  SRVP+ 
Sbjct: 123 PARVDDAIAYIAGDQRIRDVVLSGGDPLLLPDDCLAGILSALSRIPHVEIVRIGSRVPVT 182

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P+RI P L + LK    PVY+  H NHP E + ++  A +RLA+AG+ L +Q+VLLKG+
Sbjct: 183 LPERITPGLARLLKRH-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTVLLKGV 241

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           NDDP+ + +LMR  + +R++PYY+H  DL  GT+HFR  + +G  ++ +L+   SGL  P
Sbjct: 242 NDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVAQGISVMQALRGHTSGLAVP 301

Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            Y++DLPGG GKV + +      G      T++     +YP  
Sbjct: 302 HYVIDLPGGKGKVDVLSGRPGSDGRN-LVFTNYKGEEIEYPEP 343


>gi|322419288|ref|YP_004198511.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18]
 gi|320125675|gb|ADW13235.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18]
          Length = 343

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 136/342 (39%), Positives = 209/342 (61%), Gaps = 11/342 (3%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + +TS ++L       + Q  ++  +   Y + +TP    LI    P DPI RQ +P  E
Sbjct: 10  RCITSPEELSGLF---RSQGADLTCVVRRYPMRITPYYLGLIRE--PGDPIWRQCVPDPE 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           ELN +  +  DP+ +   SP+ G++HRYPDR++  +   C VYCRFC R+  VG Q    
Sbjct: 65  ELNDV-TQSPDPLDEERLSPVPGLIHRYPDRVVFLVSTACAVYCRFCMRKRGVGCQG--- 120

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           +S    + ++AYI  K QI +VI +GGDPL+LS  RL  +L  LR I HV+I+R  +RVP
Sbjct: 121 MSPAPVDQSVAYIASKPQIRDVILSGGDPLLLSDDRLDGILTALRRIPHVEIIRIGTRVP 180

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +  P+RI  +L + LK   +P+Y+  H NHP E +E++  A +RLA+AGI L +QSVLLK
Sbjct: 181 VTLPERITVKLARLLKRH-QPLYLNTHFNHPREITEQSARACARLADAGIQLGNQSVLLK 239

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDP+++  LM+  + +R++PYY+H  DL  GT+HFR  + +G  ++A+L+   SGL 
Sbjct: 240 GVNDDPQVMRELMQRLLAIRVRPYYIHQMDLVQGTAHFRTRVADGVAVMAALRGHTSGLA 299

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            P Y++DLPGG GKV++ +      G     ++++     +Y
Sbjct: 300 VPHYVIDLPGGKGKVEVTSARFSGDG-SRLTVSNYLGEEIEY 340


>gi|237755590|ref|ZP_04584206.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692253|gb|EEP61245.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 374

 Score =  426 bits (1096), Expect = e-117,   Method: Composition-based stats.
 Identities = 122/345 (35%), Positives = 194/345 (56%), Gaps = 6/345 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ +TS  +L     IK E+  +  +IS  +    TP   +LINP++ NDPI +Q 
Sbjct: 28  WQIANR-ITSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQI 84

Query: 61  IPQKEELNILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           +P  +E++   +E    DP  ++  SP+ G+ HRYPDR+L +  + C VYCR C R+ M 
Sbjct: 85  LPDIKEIDEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMF 144

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +     + ++ +A   YI+    I EV+ +GGDPL L +K+++ +LK L  I H+ ++
Sbjct: 145 -LEDERARTKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVI 203

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  SR  +V+P R   E +  L E    V++  H NHP E + E   A+  + + G  +L
Sbjct: 204 RIGSRELVVNPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVL 263

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKGIND  E + NLMR  ++++IKPYYL   D   G  HFR  +E G +I+  L+
Sbjct: 264 NQTVLLKGINDSKETIENLMRDLLKVKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLR 323

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
            ++SGL  P + +DL GG GKV +  + I +         ++ N 
Sbjct: 324 GRLSGLGIPTFAVDLLGGLGKVPVLPNYIIEKNEDYIVFRNYENK 368


>gi|115524934|ref|YP_781845.1| hypothetical protein RPE_2928 [Rhodopseudomonas palustris BisA53]
 gi|115518881|gb|ABJ06865.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisA53]
          Length = 361

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 177/349 (50%), Positives = 244/349 (69%), Gaps = 4/349 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL S  +L    L   EQ+  + E+++ Y++A+T  +A+LI+P +PNDPIARQ+IP  +
Sbjct: 12  RTLRSPAELVARGLAPAEQLAALDEVASRYAVAVTAAVADLIDPADPNDPIARQYIPSAQ 71

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL I   ER DPIGD  HSP+ GIVHR+ DR+L KL+ VC VYCRFCFRREMVG  K + 
Sbjct: 72  ELVISAAERADPIGDAAHSPVAGIVHRHADRVLFKLVSVCAVYCRFCFRREMVGPGKDSA 131

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS +   AA+ YI+   +IWEVI TGGDPL+LS +RL++V+  L  I+HV+I+RFH+RVP
Sbjct: 132 LSPQAYRAAIDYIRAHGEIWEVILTGGDPLMLSPRRLEEVMADLAAIEHVKIVRFHTRVP 191

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + +P RI+ +L+  LK  G   ++A+HANHP E +  A AA +R+ +AGI ++SQSVLL+
Sbjct: 192 VAEPSRISRDLVAALKADGVTTWVALHANHPRELTAAARAACARMVDAGIAMVSQSVLLR 251

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDD + LA LMR FVE RIKPYYLHH DLA GT+H R T+ EG++++  L+ ++SGLC
Sbjct: 252 GVNDDADTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGRELMRQLRGRVSGLC 311

Query: 306 QPFYILDLPGGYGKVKIDTHNI----KKVGNGSYCITDHHNIVHDYPPK 350
           QP Y+LD+PGG+GK  +    +      V    Y + D+    H YPP 
Sbjct: 312 QPDYVLDIPGGFGKAPVGPEYLSPVASSVETQHYRVMDYCGDTHLYPPA 360


>gi|188996732|ref|YP_001930983.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium
           sp. YO3AOP1]
 gi|188931799|gb|ACD66429.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium
           sp. YO3AOP1]
          Length = 374

 Score =  426 bits (1095), Expect = e-117,   Method: Composition-based stats.
 Identities = 122/345 (35%), Positives = 192/345 (55%), Gaps = 6/345 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++T TS  +L     IK E+  +  +IS  +    TP   +LINP++ NDPI +Q 
Sbjct: 28  WQIANRT-TSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQI 84

Query: 61  IPQKEELNILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           +P  +E++   +E    DP  ++  SP+ G+ HRYPDR+L +  + C VYCR C R+ M 
Sbjct: 85  LPDIKEIDEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMF 144

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +     + ++ +A   YI+    I EV+ +GGDPL L +K+++ +LK L  I H+ ++
Sbjct: 145 -LEDERARTKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVI 203

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  SR  + +P R   E +  L E    V++  H NHP E + E   A+  + + G  +L
Sbjct: 204 RIGSRELVANPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVL 263

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKGIND  E + NLMR  ++ +IKPYYL   D   G  HFR  +E G +I+  L+
Sbjct: 264 NQTVLLKGINDSKETIENLMRDLLKAKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLR 323

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
            ++SGL  P + +DL GG GKV +  + I +         ++ N 
Sbjct: 324 GRLSGLGIPTFAVDLLGGLGKVPVLPNYIIEKNEDYIVFRNYENK 368


>gi|301058169|ref|ZP_07199221.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2]
 gi|300447801|gb|EFK11514.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2]
          Length = 354

 Score =  425 bits (1094), Expect = e-117,   Method: Composition-based stats.
 Identities = 132/337 (39%), Positives = 201/337 (59%), Gaps = 6/337 (1%)

Query: 12  QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILP 71
           + +   + +     +++K + + Y + + P    LI   N  DPI RQ +P   EL+   
Sbjct: 19  ESIMEPDALPSSHPEKLKRVISRYPMRINPYYLGLIREKN--DPIYRQSMPDIRELDDKG 76

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
               DP+ +  HSP++G+ HRYPDR+LL +   C VYCRFC R+  VG  +  +++ +  
Sbjct: 77  AAP-DPLNEEGHSPVRGLTHRYPDRVLLLVSSECAVYCRFCNRKRKVG--RPGMVTDRSI 133

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
           E  + YI+   ++ +V+ +GGDPL+L   RL ++L  L  I HV+I+R  +RVP   PQR
Sbjct: 134 EEGIDYIRAHREVRDVLLSGGDPLLLEDARLGEILSALHAISHVEIIRIGTRVPCTLPQR 193

Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
           I PEL   L++   P+Y+ +H NHP E + EA  A +RLA+AGI L  Q+VLLKG+NDDP
Sbjct: 194 ITPELAGLLQKF-HPLYMNVHFNHPLEITAEATLACNRLADAGIPLGCQTVLLKGVNDDP 252

Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
            ++  LMR  + +R+KPYYL H D A GTSHFR ++  G  I+  L+   SGLC P + +
Sbjct: 253 SVMQELMRKLLIIRVKPYYLFHGDPARGTSHFRTSVSRGLNIIRELQGHTSGLCVPHFAI 312

Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           DL GG GKV +    ++   +GS  +T++    + +P
Sbjct: 313 DLLGGGGKVPLLPDYLQGREDGSLLVTNYRGNAYRHP 349


>gi|147676951|ref|YP_001211166.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI]
 gi|146273048|dbj|BAF58797.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI]
          Length = 423

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 118/347 (34%), Positives = 186/347 (53%), Gaps = 5/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ H+ ++ +  L       + Q  +IK +   Y  A++P  A+L+     +DPI  Q 
Sbjct: 75  WQMSHR-ISDSGALAELFGFNEMQCAQIKRVGMRYRWAISPYYASLMEGDIEHDPIRLQS 133

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EELN       DP+ +   SP   +  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 134 VPSIEELNETGH--PDPMAEELTSPAPCVTRRYPDRLIINVTNKCAMYCRHCQRRRNIG- 190

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +       +   AAL YI++  +I +V+ TGGD L+LS  ++  +L  L  IKHV+I R 
Sbjct: 191 EVDRHSPHESLVAALEYIRKNREIRDVLITGGDALLLSDSKIDWLLSELDKIKHVEIKRL 250

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQRI PEL   LK+   P+Y+    NHP E + E+  A   LA AG++L +Q
Sbjct: 251 GTRAIVTLPQRITPELCDVLKKHP-PIYVNTQFNHPREVTPESKQACDMLAEAGVVLGNQ 309

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+N+DP ++  L +  +++ ++PYY+ H     GT HF   ++EG  I+  L+  
Sbjct: 310 AVLLKGVNNDPHVMKKLNQELLKIMVRPYYIFHAKPVKGTLHFITAVDEGISIMEKLRGY 369

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P YI++ P GYGK  +    +         +    N V +Y
Sbjct: 370 TSGLAVPTYIINAPNGYGKTPVLPCYVLGNNGDKIKLRTWENRVLEY 416


>gi|150390499|ref|YP_001320548.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
           metalliredigens QYMF]
 gi|149950361|gb|ABR48889.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus
           metalliredigens QYMF]
          Length = 422

 Score =  425 bits (1093), Expect = e-117,   Method: Composition-based stats.
 Identities = 117/348 (33%), Positives = 190/348 (54%), Gaps = 4/348 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL ++ ++    L     +  ++I++IK++   +  +++P    LI+ +N   PI    
Sbjct: 67  WQLSNR-ISDVDTLTKIIKLDDKEIEDIKKVGQEFRWSVSPYYTTLIDDNNKYCPIKLMA 125

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   E+     +  DP+ +   +P   I  RYPDR+++ + + C +YCR C RR  +G+
Sbjct: 126 IPHGYEIANTKGD-TDPMAEEFTNPAGSITRRYPDRLIINVTNECAMYCRHCQRRRNIGT 184

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                 S +  + ++ YI++  +I +V+ TGGD L LS+  L  +L  L  I  V  +R 
Sbjct: 185 -NDLHTSREVLQESIDYIRDNPEIRDVLITGGDALTLSNSMLDWLLGELHAIPSVDYIRL 243

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR  +  PQRI  +LI  LK+   P++I  H NHP E +EE+ AA  RL+NAGI L +Q
Sbjct: 244 GSRTLVTMPQRITDKLINILKKYP-PIFINTHFNHPMEITEESKAACDRLSNAGIPLGNQ 302

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL GIN++  ++  L    ++ R++PYY+ H     GTSHF  ++++G +I+  L+  
Sbjct: 303 AVLLNGINNNKFVMRLLNHELLKCRVRPYYIFHAKHVIGTSHFNTSVDDGIEIMEYLRGY 362

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG+  P YI++ PGG GK  I    +   G+ S  I      V DYP
Sbjct: 363 TSGMAIPTYIINAPGGKGKTPILPQYLISRGSHSIKIRTWDGEVIDYP 410


>gi|225849905|ref|YP_002730139.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1]
 gi|225646470|gb|ACO04656.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1]
          Length = 378

 Score =  424 bits (1092), Expect = e-117,   Method: Composition-based stats.
 Identities = 124/346 (35%), Positives = 194/346 (56%), Gaps = 5/346 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ + S Q+L     I K++ +  +++S  +    TP   +L+   +  DP+ RQ 
Sbjct: 28  WQLKNR-IKSIQELEKVFSIDKKKKEIFQKVSPVFHFGTTPYYISLVKKPDYTDPVFRQI 86

Query: 61  IPQKEELNILPE--EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
            P  EE++   +     DP  +   SP++GI HRYPDR+L ++   C VYCR C R+   
Sbjct: 87  FPSFEEIDPDIQNNGSNDPFNEER-SPVEGITHRYPDRVLFRVTTFCSVYCRHCMRKRNF 145

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
                   S KD +  + YI++   I EV+ +GGDPL L +K+L  +L  L+ IKHV I+
Sbjct: 146 I-YGERAKSKKDIDIMIEYIRKNRSIREVLISGGDPLTLPNKKLDYILGRLQGIKHVDII 204

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  SR P+V+P R   E +  L E    ++I  H NHP E ++E   A+  + + G  +L
Sbjct: 205 RIGSREPVVNPFRFYDENLLELFERYDKLWIVTHFNHPNEITQETKKAVKNILSTGTPVL 264

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKGINDD  I+  LMR+ + ++IKPYYL   D   G  HFR  I++G +I+  L+
Sbjct: 265 NQTVLLKGINDDKYIIEELMRSLLRVKIKPYYLFFCDPTKGVLHFRTDIKKGIEIMEYLR 324

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            ++SGL  P Y +DLP G GKV +    I ++ + S    ++   +
Sbjct: 325 GRLSGLGIPTYAVDLPEGKGKVPLLPEYIVEINDKSTVFRNYEGEI 370


>gi|148264204|ref|YP_001230910.1| lysine 2,3-aminomutase YodO family protein [Geobacter
           uraniireducens Rf4]
 gi|146397704|gb|ABQ26337.1| L-lysine 2,3-aminomutase [Geobacter uraniireducens Rf4]
          Length = 347

 Score =  424 bits (1091), Expect = e-117,   Method: Composition-based stats.
 Identities = 138/348 (39%), Positives = 207/348 (59%), Gaps = 9/348 (2%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +   ++TS + L     I  E    +  +   Y + +TP   NLIN   P DP+ RQ
Sbjct: 4   WQNILAASITSPEQLARRFGIDAE---PLLRVVQRYPMRITPYYLNLINE--PGDPLWRQ 58

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   EL     ++EDP+ +   SP+ G++HRYPDR++  +   C VYCRFC R+  VG
Sbjct: 59  CVPDARELEDDL-QQEDPLREEILSPVPGLIHRYPDRVVWLVSSTCAVYCRFCMRKRQVG 117

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
              G V       AAL YI  + +I +VI +GGDPL+L    L+++L  LR I H++I+R
Sbjct: 118 C-VGAVTGKVQISAALDYIASRPEIRDVILSGGDPLLLDDDALEEILARLRQIPHLEIIR 176

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             SRVP+  P+RI   L + LK    P+YI  H NHP E + E+  A +RLA+AGI L +
Sbjct: 177 IGSRVPVTLPERITTRLCRMLKRY-HPLYINTHFNHPLEITAESATACARLADAGIPLGN 235

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLKG+ND+P ++  LM+  +++R+KPYY+H  DL  GT HFR  +E+G +I+ SL+ 
Sbjct: 236 QTVLLKGVNDNPGVMKRLMQLLLKIRVKPYYIHQMDLVKGTGHFRTRVEQGLEIMESLRG 295

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             SG+  P+Y++DL GG GKV +    +K+VG     + ++   + +Y
Sbjct: 296 HTSGMASPYYVIDLEGGKGKVPLLPDYVKRVGGNVLLVRNYRGEMVEY 343


>gi|298292101|ref|YP_003694040.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM
           506]
 gi|296928612|gb|ADH89421.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM
           506]
          Length = 385

 Score =  424 bits (1091), Expect = e-117,   Method: Composition-based stats.
 Identities = 178/342 (52%), Positives = 241/342 (70%), Gaps = 3/342 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL    +L  A+L+  +    +  ++  Y++A+TP +A LI+P +P DPIARQF+P   
Sbjct: 16  RTLRRLDELVEASLVAPD--PRLDAVAARYAVAVTPTLAGLIDPADPADPIARQFVPDAR 73

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E+  LPEE EDPIGD  HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG    T 
Sbjct: 74  EIETLPEELEDPIGDEAHSPVAGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETS 133

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS +  EAALAY+    ++WEV+ TGGDPL+ + +RL  +++ L  I HV+I+RFH+RVP
Sbjct: 134 LSEEALEAALAYVAAHPEVWEVVVTGGDPLVAAPRRLADLMRRLAAIDHVKIVRFHTRVP 193

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           I  P+R+ P L+  L+ AG   Y A+HANH  E   EA AA++RLA+AGI L+ QSVLL 
Sbjct: 194 IASPERVTPALVDSLRAAGLTTYAAVHANHARELGPEARAALARLADAGIALVGQSVLLA 253

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDD + L+ L R  VE R+KPYYLHHPDLA GT+HFRLTIE GQ+++ +L+ ++SGL 
Sbjct: 254 GVNDDADTLSALFRALVENRVKPYYLHHPDLAPGTAHFRLTIERGQELMRALRGRVSGLA 313

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            P Y+LD+PGG+GKV +    ++    G + +TD+   VH Y
Sbjct: 314 IPTYVLDIPGGFGKVPVGPGYLEPTPEG-WRVTDYCGGVHAY 354


>gi|325290800|ref|YP_004266981.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271]
 gi|324966201|gb|ADY56980.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271]
          Length = 416

 Score =  424 bits (1091), Expect = e-116,   Method: Composition-based stats.
 Identities = 123/347 (35%), Positives = 191/347 (55%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+H+ +T  + L     +   Q  EI ++   Y  A++P   +L +  NP DP+  Q 
Sbjct: 71  WQLKHR-ITDVETLDGIVGLSAVQKKEISKVGRVYRWAISPYYLSLADFSNPLDPVLMQG 129

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL     E EDP+ +   SP   I  RYPDR+++ + ++C +YCR C RR  +G 
Sbjct: 130 LPTGMELEDDKGE-EDPMAEALTSPAPCITRRYPDRLIINVTNMCGMYCRHCQRRRNIG- 187

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +  +  + +D  AALAY++E  +I +V+ TGGD L+LS + L  +L  L  I HV+I R 
Sbjct: 188 EIDSHKNRQDLSAALAYVRENPEIRDVLITGGDALLLSDETLDWLLNELHQIPHVEIKRL 247

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  P RI   L+  L +   P+Y+    NHP E + EA  A+ RL +AG+IL +Q
Sbjct: 248 GTRVPVTLPARITDHLVNILAKYP-PLYLNTQFNHPIEVTLEAKQAVDRLISAGVILGNQ 306

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKGIN+ P I+  L +  +++R++PYY+ H     GT HF  +I+EG  ++  L+  
Sbjct: 307 AVLLKGINNHPNIMKKLNQELLKIRVRPYYIFHAKNIKGTKHFIPSIQEGLAVMEHLRGY 366

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P YI++ P G GK+ +    +  +             V  Y
Sbjct: 367 TSGLAVPTYIINAPKGGGKIPLLPQYLLSLNENKAVFRSWEGNVVHY 413


>gi|317154407|ref|YP_004122455.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316944658|gb|ADU63709.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 416

 Score =  423 bits (1089), Expect = e-116,   Method: Composition-based stats.
 Identities = 118/352 (33%), Positives = 184/352 (52%), Gaps = 11/352 (3%)

Query: 1   MQLRHKTLTS--AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q+ ++ L     + +   +            +     +A+TP    +         + R
Sbjct: 61  WQIDNRILDVDMVEKILGYS------RAGSMPLGKGLPMAVTPYYLGVAAVAGSAS-LRR 113

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
              P   E  +   E EDP+G+  H  + GIVHRYPDR+L      C  YCR+C R  +V
Sbjct: 114 CIEPTIHEFVMDQSEAEDPLGEEGHMVVPGIVHRYPDRVLFLATDYCSTYCRYCTRSRLV 173

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G       + K  ++A+AYI+    I +V+ +GGDPL L   RL  +L  LR I HV+I+
Sbjct: 174 GRNGRKHDTKK-WKSAIAYIRNTPAIRDVLLSGGDPLTLPDDRLDWLLTELRAIPHVEII 232

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  ++VP V PQRI PEL   L++   P++I++H  HP E + E + A + LA+AGI L 
Sbjct: 233 RIGTKVPAVLPQRITPELTAMLRKH-HPLFISLHFAHPDELTAETVRACTMLADAGIPLG 291

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           SQ+VLLKG+NDD   +  LM+  ++ R++PYYL+  D   G++HFR  +E+G +I+  L+
Sbjct: 292 SQTVLLKGVNDDTNTMKRLMQGLLKARVRPYYLYQCDPIPGSAHFRTRVEKGLEIIQGLR 351

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
              SG   P Y++D PGG GK+ +              + ++   ++ YP  
Sbjct: 352 GHTSGYAVPSYVIDAPGGGGKIPLLPEYYVGRDERGVILRNYEGNIYTYPDP 403


>gi|228994304|ref|ZP_04154195.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442]
 gi|228765454|gb|EEM14117.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442]
          Length = 367

 Score =  423 bits (1088), Expect = e-116,   Method: Composition-based stats.
 Identities = 120/350 (34%), Positives = 191/350 (54%), Gaps = 7/350 (2%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q R++ +   ++L     +  E+   IK     Y  A+TP  A+L++  +P+ PI +Q I
Sbjct: 13  QFRNR-IQKIEELKQYINVTPEEEQAIKRCEGIYRWAVTPYYASLMDKDDPSCPIRKQAI 71

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  I      DP+GD  +     IVH+YPDRI++ +   CPVYCR C R+      
Sbjct: 72  PSSGEFMINEYSDVDPVGDTKYRVTNRIVHKYPDRIIMLITDQCPVYCRHCTRKYHTTDL 131

Query: 122 KGTVLSSKDTEA---ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            GT     + E       YI+   +I +V+ TGGDPL  S +RL+ +LK LR I HV+I+
Sbjct: 132 DGTYFERSEAEGYEIDFEYIENHPEIRDVLLTGGDPLTYSDRRLESILKRLRSIPHVEII 191

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           RF SR P++ PQRI  E  + L++   P+++  H NHP E ++E+  A++ L   G+ + 
Sbjct: 192 RFGSRYPVLLPQRITKEFCEMLEKY-HPIWLNTHFNHPKEVTKESAHAVNLLLKHGVPVQ 250

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +QSVLLKGINDD + +  L++  +++R++PYYL+H D   G SHF  ++E+G +I+  L 
Sbjct: 251 NQSVLLKGINDDLDTMKQLVQALLKIRVRPYYLYHCDNVTGVSHFMTSLEKGVEIMRGLV 310

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
              +G   P YI+      GK+ I    + +  +    +  + +     P
Sbjct: 311 GHTTGFATPNYIITTIN--GKIPIPLETVLEHSDEGLILKSYEDKETVIP 358


>gi|225181359|ref|ZP_03734803.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
           alkaliphilus AHT 1]
 gi|225167940|gb|EEG76747.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
           alkaliphilus AHT 1]
          Length = 416

 Score =  421 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 120/347 (34%), Positives = 193/347 (55%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R + +   +DL     + +E+  E++++      A TP   +L+NP +PN P+ RQ 
Sbjct: 70  WQVRSR-INKVEDLIELLELNEEEAAEVRKVGEKNRWATTPYYLSLMNPDDPNCPVRRQA 128

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  EEL   P  ++DP+G+   SP   I  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 129 IPATEELLN-PVGKDDPMGEQYTSPAPAITRRYPDRLIINVTNQCGMYCRHCQRRRNIG- 186

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +   + + +D +AAL Y++   +I +V+ TGGD L+L+ + +  +L  L  I HV+I R 
Sbjct: 187 EVDRMTAREDLQAALDYVRNHPEIRDVLLTGGDALMLNEEIIDWLLTELDNIPHVEIKRL 246

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR  +  P R+  EL   L++   PVYI  H N+P E +     A  +L  AG+ L +Q
Sbjct: 247 GSRTLVTMPMRVTDELCAVLEKHS-PVYINTHFNNPAEVTPAVAEATRKLTRAGVSLGNQ 305

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL G+NDDP ++  L    +++ I+PYY+ H     GT+HFR  +E G +I+  L+ +
Sbjct: 306 AVLLAGVNDDPHVMKKLNHMLLQVMIRPYYIFHAKAVTGTAHFRTRVEVGIEIMEHLRGQ 365

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG+  P +I++ P GYGK  +    +   G     I    N V +Y
Sbjct: 366 TSGMAIPTFIVNAPEGYGKTPMLPEYLISSGRDKIFIRTWENRVFEY 412


>gi|148255402|ref|YP_001239987.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
 gi|146407575|gb|ABQ36081.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
          Length = 364

 Score =  421 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 179/358 (50%), Positives = 238/358 (66%), Gaps = 10/358 (2%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R  TL SA DL    L        ++ ++  Y++A+T  +A+LI+  +P+DPIARQF+P 
Sbjct: 6   RPTTLRSAADLVAQGLAAPSDEATLERVAQRYAVAVTTHLADLIDADDPDDPIARQFVPS 65

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
            +EL   P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG  K 
Sbjct: 66  ADELKAHPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
             LS +   AALAYI+   +IWEVI TGGDPL+LS +RL++++  L  I HV+I+R H+R
Sbjct: 126 NALSEEAYRAALAYIRSHGEIWEVILTGGDPLMLSPRRLKEIMADLAAIDHVRIIRIHTR 185

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           +P+ DPQRI   L+  LK  G   ++A+HANHP E +    +A +RL +AGI L+SQSVL
Sbjct: 186 LPVADPQRITAALVDALKVQGAATWVALHANHPRELNAAVRSACARLIDAGIPLVSQSVL 245

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+NDD   L  LMR FVE RIKPYYLHH DLA GT+H R T+E GQ ++ +L+ ++SG
Sbjct: 246 LRGVNDDVATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLEHGQSLLRALRGRVSG 305

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVG----------NGSYCITDHHNIVHDYPPKS 351
           LCQP Y+LD+PGGYGK  +    +                 Y + D+    H YPP +
Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYLTAEDFVEQDHAAGTQTRYRVIDYCGEAHLYPPAA 363


>gi|195952479|ref|YP_002120769.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932091|gb|ACG56791.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 365

 Score =  421 bits (1084), Expect = e-116,   Method: Composition-based stats.
 Identities = 121/343 (35%), Positives = 194/343 (56%), Gaps = 5/343 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLI-NPHNPNDPIARQ 59
            QL+++ +T+ ++L     +  E+I     ++  Y  A+TP   +L+ NP +  DPI  Q
Sbjct: 15  WQLQNR-ITTLEELSKYIELTNEEIKFFDAVAEEYPFAVTPYYLSLVKNPKDKKDPIRLQ 73

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E++   ++   P   N  + +KG+ HRY DR L+ +   C VYCR C R+ +  
Sbjct: 74  IVPSPLEIDENAQQNSHPNALNEETFIKGLTHRYEDRALISVTSYCGVYCRHCMRKRIF- 132

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            +       +  +    YI+    I +V+ +GGDPL L ++RL+ +L  L  I+H++++R
Sbjct: 133 KEGTHAAPKELLDVYFDYIKNHKTIKDVLISGGDPLTLDNERLKYILNNLSSIEHLEVIR 192

Query: 180 FHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
             SRVP+  PQR+ + EL+  L    K ++I  H NHP E +E+A  AI  L  AG+ + 
Sbjct: 193 IGSRVPVTLPQRLYDEELLDILSRYDK-LWINTHFNHPNEITEDAKVAIRNLLKAGVPVN 251

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKG+NDD E +  LMR  + +++KP YL H D   GT HFR +IE+G +I+  ++
Sbjct: 252 NQAVLLKGVNDDKETMLELMRKLLSIKVKPQYLFHCDPITGTIHFRTSIEKGLEIMDYMR 311

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
            ++SG   P Y +DLPGG GKV +     KK+ +G Y      
Sbjct: 312 GRLSGFGIPTYAIDLPGGKGKVPLIPSYFKKLEDGLYEFIAFD 354


>gi|197106130|ref|YP_002131507.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1]
 gi|196479550|gb|ACG79078.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1]
          Length = 341

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 170/347 (48%), Positives = 233/347 (67%), Gaps = 10/347 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
           + L + +DL  A L     ++ +  ++  Y++A+TP +A L          +ARQF+P  
Sbjct: 3   RPLRTPEDLIAAGLAPAAALEGLARVAERYAVAITPDMAGLSET----CEGVARQFVPTA 58

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            EL   PEER DPIGD  HSP++GIVHRYPDR+LLK  H C VYCRFCFRREMVG +   
Sbjct: 59  AELVQTPEERADPIGDEAHSPVEGIVHRYPDRVLLKANHACAVYCRFCFRREMVGPEGVR 118

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            LS    +AA+AY+  + +IWEVI TGGDPLILS +RL  +   L  I HV+++RFH+RV
Sbjct: 119 PLSPAALDAAMAYVAARPEIWEVIVTGGDPLILSPRRLADIGARLAGIPHVKVVRFHTRV 178

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P VDP ++   +++ LK +GK V++A+HANHP E +  A+AA +R+ +AGI ++SQ+VLL
Sbjct: 179 PAVDPGKVTAGVVEALKASGKTVWVALHANHPDELTPAALAACARIVDAGIPMVSQTVLL 238

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           KGINDDP++L  LMR FVE RIKPYYLHH DLA GT HFR T+ EGQ ++ +L+ ++SGL
Sbjct: 239 KGINDDPDVLDALMRRFVETRIKPYYLHHGDLAPGTGHFRATLAEGQDLMRALRGRLSGL 298

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351
            QP Y+LD+PGG+GK  +    +         + D     H YPP++
Sbjct: 299 AQPTYVLDIPGGHGKAPVGPAYVHGGE-----VEDPQGRRHAYPPEA 340


>gi|323701829|ref|ZP_08113499.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           nigrificans DSM 574]
 gi|323533133|gb|EGB23002.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           nigrificans DSM 574]
          Length = 422

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 121/348 (34%), Positives = 187/348 (53%), Gaps = 4/348 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ +   Q L     +  E ++ I ++  HY  A++P    L+       PI +Q 
Sbjct: 74  WQMANR-IKDVQVLGQLMNLSAEDMNLIDQVGQHYRWAVSPYYLALVIISGLTGPIGKQA 132

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +E+       EDP+G+   SP   I  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 133 IPSIKEIEDHSG-VEDPMGEEFTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRRNIG- 190

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +       K  +AAL YI+E  +I +V+ TGGD L+L  K++  +L  L  I HV+I R 
Sbjct: 191 EVDVHKPRKVLQAALDYIRENEEIRDVLITGGDALLLPDKQIDWLLTELDRIPHVEIKRI 250

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQRI P L   L++   P+YI    NHP E + EA  A  RL  AG++L +Q
Sbjct: 251 GTRTPVTMPQRITPTLCAILEKHP-PIYINTQFNHPLEVTPEAKTACDRLVKAGVVLGNQ 309

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLK IN+ P+++  L ++ +++R++PYY+ H     GT HF  ++EEG  I+  L+  
Sbjct: 310 AVLLKDINNHPDVMKRLNQSLLQIRVRPYYIFHAKNVKGTGHFITSVEEGIAIMDQLRGY 369

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SGL  P YI++ P GYGK  I    +    +    +      V  YP
Sbjct: 370 TSGLAVPTYIINAPNGYGKTPILPQYVLDRKDNYITLRTWEKRVIRYP 417


>gi|114797088|ref|YP_761814.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444]
 gi|114737262|gb|ABI75387.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444]
          Length = 349

 Score =  420 bits (1081), Expect = e-115,   Method: Composition-based stats.
 Identities = 165/347 (47%), Positives = 236/347 (68%), Gaps = 2/347 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           ++  T   A +L  A +I  +Q+  +  ++ +Y IAL   +A LI+  +P DPI  Q++P
Sbjct: 1   MKPVTYRHAGELLTAGIISADQLPVVSRVAENYVIALPARLATLIDRDDPLDPIGLQYVP 60

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
             EELN  P E +DPIGD  HSP+ GIVHRYPDR+LLK+   CPVYCRFCFRRE VG +K
Sbjct: 61  SGEELNAQPGEMDDPIGDAAHSPIPGIVHRYPDRVLLKITSTCPVYCRFCFRRERVGPEK 120

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G  LS  + +AA AYI ++ +I+EVI TGGDP+ILS  R   + + L  I HV+++R+HS
Sbjct: 121 GDALSKAEIDAACAYIADRPEIFEVILTGGDPMILSPARAGALTRRLEAIDHVKVIRWHS 180

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           RVP+  P+R+ PE  + ++ + K V++A+HANH  EF+ EA+AAI RL+ AGI L+SQSV
Sbjct: 181 RVPVAAPERVTPEFTEAIRSSEKAVFVAVHANHAREFTPEAVAAIRRLSQAGISLVSQSV 240

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LL+G+ND  E LA+LMR F+ + IKPYYLH  D A GTSHFR+ +EEGQ +V  L++++S
Sbjct: 241 LLRGVNDTFEALADLMRAFLSVGIKPYYLHQLDAAPGTSHFRVPVEEGQALVRRLRDELS 300

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
           GL  P Y+ D+PGG  K  ++  +I++  + ++ +       +  PP
Sbjct: 301 GLATPTYVADIPGGVSKAVMNLPDIERR-DDAFVLRGRDGETYL-PP 345


>gi|91976978|ref|YP_569637.1| hypothetical protein RPD_2506 [Rhodopseudomonas palustris BisB5]
 gi|91683434|gb|ABE39736.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB5]
          Length = 363

 Score =  419 bits (1079), Expect = e-115,   Method: Composition-based stats.
 Identities = 183/350 (52%), Positives = 249/350 (71%), Gaps = 4/350 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L    L   +  D++++++  Y+IA+TP IA LI+P +P+DPIARQ+IP+ EE
Sbjct: 14  TLRQPAELIAQGLAPADAQDDLEQVAQRYAIAVTPDIAALIDPDDPDDPIARQYIPRAEE 73

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L  LP ER+DPIGD  HSP++GIVHR+ DR+LLKL+HVC VYCRFCFRREMVG  K   L
Sbjct: 74  LATLPIERDDPIGDGAHSPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRREMVGPGKDNSL 133

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S   T AAL YI+   +IWEVI TGGDPL+LS +RL  ++  L  I HV+I+RFH+R+P+
Sbjct: 134 SGDATAAALGYIRAHPEIWEVILTGGDPLMLSPRRLADIMAELATIDHVRIIRFHTRLPV 193

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            +P RI+ EL++ L+  GK V++A+HANHP E +  A AA +R+ +AGI ++SQSVLL G
Sbjct: 194 AEPARISAELVRALRVEGKTVWMALHANHPRELTTAARAACARIIDAGIPMVSQSVLLAG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMR FVE RIKPYYLHH DLA GT+H R ++ EGQ ++ +L+ ++SGLCQ
Sbjct: 254 VNDDAATLEALMRVFVECRIKPYYLHHGDLAPGTAHLRTSLAEGQALMRALRGRVSGLCQ 313

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKSS 352
           P Y+LD+PGGYGK  +  + +        +  Y ++D+   VH YPPK +
Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLAADDGTAADSRYRVSDYCGDVHLYPPKPA 363


>gi|296448496|ref|ZP_06890376.1| lysine 2,3-aminomutase YodO family protein [Methylosinus
           trichosporium OB3b]
 gi|296253995|gb|EFH01142.1| lysine 2,3-aminomutase YodO family protein [Methylosinus
           trichosporium OB3b]
          Length = 376

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 172/346 (49%), Positives = 229/346 (66%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL S  DL  A L+  E    ++ +   YS+A+T   A L++  +P DPIARQF+P   E
Sbjct: 22  TLKSVADLVAAGLVAPEAAPALRAVEARYSVAVTAETAALLDRADPRDPIARQFLPDARE 81

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+ LPEE  DPIGD+  SP++G+VHRY DR+LLKLL VCP+YCRFCFRRE VG  KG  L
Sbjct: 82  LDTLPEELADPIGDDAFSPVEGLVHRYSDRVLLKLLSVCPIYCRFCFRRESVGLGKGGSL 141

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S      AL YI E+ +I+EVI TGGDPL LS +RL  + + LR I HV +LR H+R P 
Sbjct: 142 SETALTRALDYIAERPRIFEVILTGGDPLALSARRLGLLAERLREIAHVAVLRIHTRAPT 201

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P  + PE +  L  +GK VY+A+H NH  E +  A  AI+R+  AG+  L+Q+VLL+G
Sbjct: 202 VSPDLVTPERLAALTASGKAVYMALHVNHARELTPRAREAIARIQAAGVATLAQTVLLRG 261

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD + L  LMR    LR+KPYYLHHPDLA GT+HFRL+IEEG+ +   L  +ISG+  
Sbjct: 262 VNDDADTLETLMRALTALRVKPYYLHHPDLAPGTAHFRLSIEEGRALHGELARRISGIAL 321

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
           P Y+LD+PGGYGKV + + +I++   G + + D     H YP + +
Sbjct: 322 PAYVLDIPGGYGKVPLQSPHIERNPAGDWLVRDRAGRAHAYPGEGA 367


>gi|94266932|ref|ZP_01290585.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
 gi|93452384|gb|EAT03003.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
          Length = 365

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 128/344 (37%), Positives = 181/344 (52%), Gaps = 8/344 (2%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +LTS  +L     +  E    ++ + + Y + + P   +LI    P DP+ RQ IP   E
Sbjct: 22  SLTSPDELAACFDLDPE---PLRAVCHRYPLRINPYYLSLI--EQPGDPLWRQAIPDPRE 76

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L       ED + +   SP+  +VH+YPDR LL     C +YCRFC R+  VG  +    
Sbjct: 77  LTDS-HCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGG 135

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             +  +AAL Y+     I +V+ +GGDPL+L+   L  +L  LR I  ++I+R  SRVP 
Sbjct: 136 RHR-LQAALDYLAATPAIHDVLLSGGDPLLLTDDELLWLLAELRKIPQLEIIRMGSRVPC 194

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
             PQR+   L   LK    P+Y+  H NHP E + EA  A  RLA AGI L +Q+VLLKG
Sbjct: 195 TLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQTVLLKG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   +  LMR  + +R+KPYYL   DL+ GT HFR  +E+G  I+  L    SGL  
Sbjct: 254 VNDDAATIKELMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLAT 313

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           P   LD PGG GK+ +     + +  G    + +     +YP  
Sbjct: 314 PTLALDAPGGMGKIPLTPDYHQVLKAGKLTFSSYTGQPGEYPNP 357


>gi|297617606|ref|YP_003702765.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145443|gb|ADI02200.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 417

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 115/346 (33%), Positives = 187/346 (54%), Gaps = 5/346 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
             +R++ +     L     I   +   I ++   Y  A++P   +L+     N+P+  Q 
Sbjct: 71  WHMRNR-INDVSVLTKILDISTFESRGITKVGRTYRWAVSPYYLSLVGDDYLNNPVYLQA 129

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL  LP+   DP+ +   SP   I  RYPDR+++ + + C ++CR C RR  +G 
Sbjct: 130 VPDPREL--LPKGELDPMDEAGTSPAPRITRRYPDRLIINVTNQCAMFCRHCQRRRNIG- 186

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +     S +D  AAL YI    +I +V+ TGGD L+LS + L  +L  L  I HV+I R 
Sbjct: 187 EIDQHASREDVRAALHYISGNPEIRDVLITGGDALLLSDRTLDWILTELDRIPHVEIKRI 246

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R+P+  PQR+ PEL + + +   P+Y+    NHP E + EA  A   L  AG +L +Q
Sbjct: 247 GTRIPVTLPQRVTPELCEVISKHP-PIYVNTQFNHPLEVTPEAKQACDMLVQAGAVLGNQ 305

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL+GIND P ++  L    + +R++PYY+ HP    GTSH  ++IE+G +I+ +L+  
Sbjct: 306 AVLLRGINDCPVVMKKLNHELLRIRVRPYYIFHPKAVRGTSHRWVSIEKGLEIMEALRGH 365

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
            SGL  P YI++ PGG+GK+ +    + K+      +      + +
Sbjct: 366 TSGLAVPTYIINAPGGFGKIPLMPQYLLKLEPDKAVVRTWEGRIVE 411


>gi|302386645|ref|YP_003822467.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           saccharolyticum WM1]
 gi|302197273|gb|ADL04844.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           saccharolyticum WM1]
          Length = 419

 Score =  419 bits (1078), Expect = e-115,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 191/347 (55%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL HK ++    L     + + +   IK++   Y  A++P   +L +PH+  DPI    
Sbjct: 64  WQLTHK-ISDINTLSEIIPLNETEKMRIKKVEKKYRWAVSPYYLSLADPHDNYDPIRLLS 122

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  +EL   P    DP+G+   +P   I  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 123 IPTHKELED-PCLDLDPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG- 180

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           ++    S +    ++ YI+E  +I +V+ TGGD L LS + L+ ++K L+ I H+  +R 
Sbjct: 181 EEDVHRSREMILESIEYIRENEEIRDVLITGGDALCLSDEDLEWMIKQLKEISHIDYIRL 240

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R  +  PQRI  +L   L++   P+YI  H NHP E ++ + AA  +LA++GI+L +Q
Sbjct: 241 GTRSLVTMPQRITDQLCSMLRKY-HPIYINTHFNHPIEITKASKAACEKLADSGIVLGNQ 299

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL GIN++  I+  L    ++ R++PYY+ H     GT+HF  +IE+G +I+  L+  
Sbjct: 300 AVLLNGINNNKYIMRVLNHELLKCRVRPYYIFHAKHVQGTAHFNTSIEDGIEIMEYLRGY 359

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SG+  P +I++ P G GK  I  + I   G G   +      +  Y
Sbjct: 360 TSGMAIPTFIVNAPKGQGKTPIFPNYIVSRGPGYVQLRTWEGNMVKY 406


>gi|51246056|ref|YP_065940.1| hypothetical protein DP2204 [Desulfotalea psychrophila LSv54]
 gi|50877093|emb|CAG36933.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 353

 Score =  419 bits (1077), Expect = e-115,   Method: Composition-based stats.
 Identities = 123/345 (35%), Positives = 190/345 (55%), Gaps = 7/345 (2%)

Query: 7   TLTSAQDLYNANLIKKEQIDEI-KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           ++TS   L+      +   + I  ++   + + +     +LI      DPI +Q IP   
Sbjct: 11  SITSPSQLHLFKKKHQNLNETISNKVIPDFPMRINSYFLSLI--EEVGDPIWKQCIPDPR 68

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E        EDP+G+   SP+  +VH+YPDR LL + + C VYCRFC R+ MVG+++   
Sbjct: 69  EEEDFIC-MEDPLGEEALSPVPNLVHKYPDRALLLVTNQCAVYCRFCTRKRMVGTER-MH 126

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           ++ ++ +A   Y++    I EV+ +GGDPL+L+  ++  +L  L+ I  + ++R  SRVP
Sbjct: 127 ITEENLQACYDYLRRTPAIREVLISGGDPLLLADDKIDHILSELQSIPSIDVIRIGSRVP 186

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
              P RI PEL+  L++   P+YI  H NHP E + EA  A + LA+ GI L  Q+VLLK
Sbjct: 187 CTLPMRITPELVAILRKY-HPLYINTHFNHPRELTPEAKKACALLADGGIPLGCQTVLLK 245

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+ + L  L    +++R+KPYYL   DL  GT+HFR T + G  I+  L   ISG+ 
Sbjct: 246 GVNDNAQTLKELFLGLLKMRVKPYYLFQADLTRGTNHFRTTTKTGIDIMRQLYGHISGMA 305

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            P   LD PGG GK+ +  + IK+ G       ++   +  YP  
Sbjct: 306 IPRLALDAPGGKGKIPLSPNYIKESGEN-LIFENYLGEICSYPEA 349


>gi|153004183|ref|YP_001378508.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
           Fw109-5]
 gi|152027756|gb|ABS25524.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp.
           Fw109-5]
          Length = 385

 Score =  418 bits (1076), Expect = e-115,   Method: Composition-based stats.
 Identities = 122/350 (34%), Positives = 190/350 (54%), Gaps = 3/350 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q R+  L +A++L     + +E+   + +      +A+TP  A+L++P +P+ PI  Q 
Sbjct: 20  WQHRN-ALRTAEELGRVVWLGEEERRGLAQALGRTRVAVTPYYASLMDPRHPSCPIRLQA 78

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   E    P +  DPIG+  H P + IVH+Y DR+L   +  C VYCR C RR +   
Sbjct: 79  IPSAREAEEAPGDLRDPIGEEAHRPARAIVHKYRDRVLFLAVDRCSVYCRHCTRRRITFG 138

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             G        E  +AY++   ++ +VI +GGDPL+LS +RL  +L  LR I HVQ+LR 
Sbjct: 139 ADGG-FDRDAIEEGIAYVRAHREVRDVIVSGGDPLVLSDERLDALLGGLRAIPHVQLLRV 197

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  P R+ P L   L+    P+++  H NHP E + +A AA   L + G+ + +Q
Sbjct: 198 ATRAPVTCPMRVTPALAALLRRHA-PLFVVTHFNHPAECTPDARAACEALVDHGVPVENQ 256

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+N    +L +L    +  R++PYYLH  DLA GT+H R  +E G  I+ +++ +
Sbjct: 257 SVLLRGVNSSARLLTDLNERLLTFRVRPYYLHQGDLAEGTAHLRTPLEAGVAILEAMRGR 316

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
            SGL  P   +DLP G GK+ +          G++ +  H    + YP  
Sbjct: 317 TSGLAIPHLAVDLPDGGGKITLQPSYQLGREGGAHALRSHRGGRYLYPDP 366


>gi|115380257|ref|ZP_01467275.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
 gi|115362736|gb|EAU61953.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
          Length = 378

 Score =  418 bits (1075), Expect = e-115,   Method: Composition-based stats.
 Identities = 116/334 (34%), Positives = 182/334 (54%), Gaps = 3/334 (0%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH  + S   L     +  ++   ++E +  + + ++P   +LI+P +P  P+  Q 
Sbjct: 47  WQQRH-AVRSLAQLERYVPLTPQERAGVQETAALFRVGISPYYLSLIDPEHPFCPVRMQS 105

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP +EE  I P E  DP+G++   P + IVH+YPDR+L   L  C VYCR C RR +   
Sbjct: 106 IPVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRRITKG 165

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                LS       +AYI+   ++ +V+ +GGDP ILS  RL+++L  L  I HV+++R 
Sbjct: 166 -GEAELSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRI 224

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  P R+   L   L+    PVY+  H NHP E + EA  A  RL + G+ + +Q
Sbjct: 225 GTRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQ 283

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VL++ +N D  I+  L    + +R++PYYLH  D+A G  H R  I +G +I+  ++  
Sbjct: 284 AVLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGH 343

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
            +GL  P   +DLPGG GKV +    + + G   
Sbjct: 344 TTGLAVPHLAVDLPGGGGKVTLQPDYVVERGEHE 377


>gi|256378515|ref|YP_003102175.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM
           43827]
 gi|255922818|gb|ACU38329.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM
           43827]
          Length = 381

 Score =  417 bits (1074), Expect = e-114,   Method: Composition-based stats.
 Identities = 118/345 (34%), Positives = 191/345 (55%), Gaps = 8/345 (2%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
             +RH+ +T+   L     +  ++   I   +  Y  ++TP  A+L++P +P  PI +Q 
Sbjct: 25  WHMRHR-VTTLDKLREWVRVSPQEEAAISGTAGKYRWSVTPYYASLMDPDDPLCPIRQQA 83

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P + EL   P+   DP+GD  +     +VH+YPDR++L +   CPVYCR C R+     
Sbjct: 84  VPAQGELLEFPDAEVDPVGDMFYRKTNRVVHKYPDRVVLLVTETCPVYCRHCTRKFHTTD 143

Query: 121 QKGTVLSSKD---TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
            +GT     +    E  L YI+E  +I +V+ TGGDPL    ++L++++  LR I  V+I
Sbjct: 144 VEGTYFRDNEGGGYEEDLRYIREHPEIRDVLLTGGDPLSYRDEKLEEIISGLRAIPSVEI 203

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR P++ PQR+  E  + L     PV++  H NHP E + EA AA+ RL   G+ +
Sbjct: 204 IRIGSRFPVLLPQRVTDEFCEMLARH-HPVWLNTHFNHPREITPEAAAAVDRLLRHGVPV 262

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLLKGINDD   +  LM   + +R++PYYL+H D   G SHF  ++E+G +I+  L
Sbjct: 263 GNQTVLLKGINDDVPTMRKLMTELLRIRVRPYYLYHCDNVTGVSHFMTSVEKGLEIMEGL 322

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342
           +  ++G   P Y+L      GK+ I     + V +G   + ++  
Sbjct: 323 QGHMTGFGVPQYVLTT--RIGKIPISRPYHEAVEDG-LALRNYRG 364


>gi|94270918|ref|ZP_01291853.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
 gi|93450620|gb|EAT01735.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
          Length = 365

 Score =  417 bits (1073), Expect = e-114,   Method: Composition-based stats.
 Identities = 129/344 (37%), Positives = 180/344 (52%), Gaps = 8/344 (2%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +LTS  +L     +  E    ++ +   Y + + P   +LI    P DP+ RQ IP   E
Sbjct: 22  SLTSPDELAARFDLDPE---PLRAVCRRYPLRINPYYLSLIKQ--PGDPLWRQAIPDPRE 76

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L       ED + +   SP+  +VH+YPDR LL     C +YCRFC R+  VG  +    
Sbjct: 77  LTDS-HCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGG 135

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             +  +AAL Y+     I +V+ +GGDPL+L+   L  +L  LR I H++I+R  SRVP 
Sbjct: 136 RHR-LQAALDYLAATPAIHDVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMGSRVPC 194

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
             PQR+   L   LK    P+Y+  H NHP E + EA  A  RLA AGI L +Q+VLLKG
Sbjct: 195 TLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQTVLLKG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   +  LMR  + +R+KPYYL   DL+ GT HFR  +E+G  I+  L    SGL  
Sbjct: 254 VNDDAATIKGLMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLAT 313

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           P   LD PGG GK+ +     + +  G      +     +YP  
Sbjct: 314 PTLALDAPGGMGKIPLTPDYHQVLKAGKLTFHSYTGQPGEYPNP 357


>gi|94263390|ref|ZP_01287204.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
 gi|93456226|gb|EAT06360.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
          Length = 365

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 128/344 (37%), Positives = 179/344 (52%), Gaps = 8/344 (2%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +LTS  +L     +  E    ++ +   Y + + P   +LI    P DP+ RQ IP   E
Sbjct: 22  SLTSPDELAARFDLDPE---PLRAVCRRYPLRINPYYLSLIKQ--PGDPLWRQAIPDPRE 76

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L       ED + +   SP+  +VH+YPDR LL     C +YCRFC R+  VG  +    
Sbjct: 77  LTDS-HCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGG 135

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             +  +AAL Y+     I +V+ +GGDPL+L+   L  +L  LR I H++I+R  SRVP 
Sbjct: 136 RHR-LQAALDYLAATPAIHDVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMGSRVPC 194

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
             PQR+   L   LK    P+Y+  H NHP E + EA  A  RLA  GI L +Q+VLLKG
Sbjct: 195 TLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAGGIPLGNQTVLLKG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   +  LMR  + +R+KPYYL   DL+ GT HFR  +E+G  I+  L    SGL  
Sbjct: 254 VNDDAATIKELMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLAT 313

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           P   LD PGG GK+ +     + +  G      +     +YP  
Sbjct: 314 PTLALDAPGGMGKIPLTPDYHQVLKAGKLTFHSYTGQPGEYPNP 357


>gi|77920113|ref|YP_357928.1| hypothetical protein Pcar_2520 [Pelobacter carbinolicus DSM 2380]
 gi|77546196|gb|ABA89758.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
          Length = 347

 Score =  417 bits (1072), Expect = e-114,   Method: Composition-based stats.
 Identities = 136/349 (38%), Positives = 203/349 (58%), Gaps = 10/349 (2%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +   ++T+   L          + E+  +   Y + +TP   +LI    P D I RQ
Sbjct: 4   WQRQLIDSVTAPAGLAERFGTD---MSELDAVVQRYPMRITPYYLDLIEK--PGDAIWRQ 58

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P + EL    E+  DP+ +   SP+  +VHRYPDR+LL     C VYCRFC R+  VG
Sbjct: 59  CVPDRRELLPCQED-ADPLAEERLSPVPLLVHRYPDRVLLLASGQCAVYCRFCTRKRKVG 117

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                 +S +  + A+ Y+    Q+ +VI +GGDPL+L   RL+ +L  LR I HV+I+R
Sbjct: 118 C-AAMGVSDRHLDEAIDYVARTEQVRDVILSGGDPLLLEDDRLEHLLMRLRAIPHVEIIR 176

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             SRVP+  PQRI  EL   L+    P+Y+  H NHP E + +A  A  RLA+AG+ L +
Sbjct: 177 IGSRVPVTLPQRITEELCAMLRRY-HPLYLNTHFNHPRELTPQAFEACRRLADAGLPLGN 235

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+G+ND P ++  L++  +++R++PYYLHH DLAAGT HFR  IE G  IVA+L+ 
Sbjct: 236 QTVLLRGVNDTPAVMRQLVKGLLKMRVRPYYLHHMDLAAGTGHFRTRIETGLDIVAALRG 295

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            ISGL  P Y++D PGG GK+ +    + K+G+ +  +      + ++P
Sbjct: 296 PISGLAVPHYVIDSPGGKGKIPLLPEYLVKLGDTAL-LRTPSGEMIEFP 343


>gi|302875509|ref|YP_003844142.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           cellulovorans 743B]
 gi|307687963|ref|ZP_07630409.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           cellulovorans 743B]
 gi|302578366|gb|ADL52378.1| lysine 2,3-aminomutase YodO family protein [Clostridium
           cellulovorans 743B]
          Length = 424

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 121/348 (34%), Positives = 189/348 (54%), Gaps = 6/348 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ ++  + L     + +E+ + IK++   Y   ++P  A+LI+  N N P+  Q 
Sbjct: 67  WQISNR-ISDIKILSKIIKLSEEEAEHIKKVEQKYRWGISPYYASLIDESNSN-PVKLQC 124

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   ELN   E   DP+G+   SP   I  RYPDR+++ + ++C  +CR C RR  +G 
Sbjct: 125 VPTLFELND--EGTLDPMGEEYTSPAGTITRRYPDRLIINVTNMCASFCRHCQRRRNIGI 182

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                 S  D E ++ YI+   +I +V+ TGG+PL+LS   +  +L  L  IK ++ +R 
Sbjct: 183 -VDKHQSISDLEESIEYIRNNREIRDVLITGGEPLLLSDGMIDWLLGELFKIKTLEYVRI 241

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RV    PQRI   L+  LK+   P+YI    NHP E + EA  A  +LAN GI L +Q
Sbjct: 242 GTRVLATLPQRITANLLSILKKYS-PLYINTQFNHPLEITREAKEACDKLANIGIPLGNQ 300

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLL GIN+D  ++  L +  ++ RIKPYY+ H     GT+HF  +I++G +I+  L+  
Sbjct: 301 TVLLNGINNDKYVMRLLNQELLKCRIKPYYIFHGKKIMGTTHFNTSIDDGIEIMEYLRGY 360

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            SG+  P YI++ P G GK  I    I   G  +  I      + DYP
Sbjct: 361 TSGMAIPTYIINAPNGNGKTPILPQYIISRGKNNVKIRTWEGKIFDYP 408


>gi|152973019|ref|YP_001338165.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|150957868|gb|ABR79898.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 342

 Score =  416 bits (1070), Expect = e-114,   Method: Composition-based stats.
 Identities = 107/324 (33%), Positives = 170/324 (52%), Gaps = 5/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           QL +  +TS  +L     +   E++   +E    + + +       +   NPNDP+ RQ 
Sbjct: 18  QLAN-VVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFIARMEKGNPNDPLLRQV 76

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +  +EE  + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    +
Sbjct: 77  LTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYA 135

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +     + ++ + A+ YI    Q+ E+IF+GGDPL+     L  ++  L  I HV+ LR 
Sbjct: 136 ENQG--TRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRI 193

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           HSR+PIV P RI   L    + +   V +  H NH  E   E  AA++ L  AG+ LL+Q
Sbjct: 194 HSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAMLRQAGVTLLNQ 253

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND+ + LA+L     +  + PYYLH  D   G +HF ++ +E ++I+  L   
Sbjct: 254 SVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTL 313

Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324
           ISG   P    ++ G   K  +D 
Sbjct: 314 ISGYMVPKLAREIGGEPSKTPLDL 337


>gi|197121712|ref|YP_002133663.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
 gi|196171561|gb|ACG72534.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K]
          Length = 402

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 122/353 (34%), Positives = 182/353 (51%), Gaps = 5/353 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH  LT+A D      +   +       + H  +A TP  A+L++  +P  PI  Q 
Sbjct: 20  WQQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQV 78

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E    P + +DPIG+  H P++ IVH+YPDR L   +  C VYCR C RR +  S
Sbjct: 79  MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                      E  +A+++   ++ +VI +GGDPL LS ++L  +L  LR I HVQ+LR 
Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+ +P R+   L         P+++  H NHP E + EA  A  RL + G+ + +Q
Sbjct: 199 ATRAPVTNPMRVTDALAAA-LRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+N    IL +L    +  R++PYYLH  DLAAGT H R  +  G  I+ +++  
Sbjct: 258 SVLLRGVNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGH 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350
            SGL  P   +DLPGG GKV +    +   G      + + +     + YP  
Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGEEGARGHWLRNGRGERYFYPEP 370


>gi|258516088|ref|YP_003192310.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257779793|gb|ACV63687.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 408

 Score =  416 bits (1069), Expect = e-114,   Method: Composition-based stats.
 Identities = 123/344 (35%), Positives = 190/344 (55%), Gaps = 5/344 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++  ++ + L         Q+++IK++   Y  A++P   +L    N N PI +QF
Sbjct: 63  WQIKNR-FSNVEQLQKILNTCP-QLEDIKKVERVYRWAVSPYYLSLSAVDNVNCPIRKQF 120

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP   EL        DP+ + N SP K +V RYPDR+++K+ + C  +CR C R+  +G 
Sbjct: 121 IPSILELQDELG-LSDPVDEKNTSPTKAVVRRYPDRLIIKVTNQCASFCRHCQRKRTIGK 179

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           Q     SS + E A+ YI++  +I +V+ TGGD L+LS K+L  +L  L  I HV+I R 
Sbjct: 180 Q-DLHTSSGNIEKAVDYIKKNPEIRDVLITGGDALLLSDKKLDWLLTELDNINHVEIKRI 238

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +RVP+  P RI  +L   L     P+YI    NHP E + EA  A ++L  AG++L +Q
Sbjct: 239 GTRVPVTLPMRITEKLCGILGNHP-PLYINTQFNHPLEVTPEAATACNKLIQAGVVLSNQ 297

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLK IND+P I+  L +  +++R++PYYL H     GT HF   +  G +I+  L+  
Sbjct: 298 SVLLKEINDNPHIIKKLNQELLKIRVRPYYLFHAMPVKGTRHFSTKLSVGLEIMEKLRGY 357

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            SGL  P YI+++ GG GKV I    +    +    +    N +
Sbjct: 358 TSGLAIPSYIVNVNGGLGKVPIQPQYLFFNEHNEITLRTWENKL 401


>gi|288937552|ref|YP_003441611.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola
           At-22]
 gi|288892261|gb|ADC60579.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola
           At-22]
          Length = 342

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 107/324 (33%), Positives = 171/324 (52%), Gaps = 5/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           QL +  +TS  +L     +   E++   +E    + + +       +   NPNDP+ RQ 
Sbjct: 18  QLAN-VVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFIARMEKGNPNDPLLRQV 76

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +  +EE  + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    +
Sbjct: 77  LTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYA 135

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +     + ++ + A+ YI    Q+ E+IF+GGDPL+     L  ++  L  I HV+ LR 
Sbjct: 136 ENQG--TRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRI 193

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           HSR+PIV P RI   L    + +   V +  H NH  E  +E  AA++ L  AG+ LL+Q
Sbjct: 194 HSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAMLRQAGVTLLNQ 253

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND+ + LA+L     +  + PYYLH  D   G +HF ++ +E ++I+  L   
Sbjct: 254 SVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTL 313

Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324
           ISG   P    ++ G   K  +D 
Sbjct: 314 ISGYMVPKLAREIGGEPSKTPLDL 337


>gi|206577764|ref|YP_002240896.1| KamA family protein [Klebsiella pneumoniae 342]
 gi|290512290|ref|ZP_06551657.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55]
 gi|206566822|gb|ACI08598.1| KamA family protein [Klebsiella pneumoniae 342]
 gi|289775285|gb|EFD83286.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55]
          Length = 342

 Score =  415 bits (1068), Expect = e-114,   Method: Composition-based stats.
 Identities = 107/324 (33%), Positives = 171/324 (52%), Gaps = 5/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           QL +  +TS  +L     +   E++   +E    + + +       +   NPNDP+ RQ 
Sbjct: 18  QLAN-VVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFIARMEKGNPNDPLLRQV 76

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +  +EE  + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    +
Sbjct: 77  LTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYA 135

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +     + ++ + A+ YI    Q+ E+IF+GGDPL+     L  ++  L  I HV+ LR 
Sbjct: 136 ENQG--TRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRI 193

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           HSR+PIV P RI   L    + +   V +  H NH  E  +E  AA++ L  AG+ LL+Q
Sbjct: 194 HSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAMLRQAGVTLLNQ 253

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+ND+ + LA+L     +  + PYYLH  D   G +HF ++ +E ++I+  L   
Sbjct: 254 SVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTL 313

Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324
           ISG   P    ++ G   K  +D 
Sbjct: 314 ISGYMVPKLAREIGGEPSKTPLDL 337


>gi|288959461|ref|YP_003449802.1| lysine 2,3-aminomutase [Azospirillum sp. B510]
 gi|288911769|dbj|BAI73258.1| lysine 2,3-aminomutase [Azospirillum sp. B510]
          Length = 345

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 174/343 (50%), Positives = 231/343 (67%), Gaps = 2/343 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPNDPIARQFIPQK 64
           K L S  DL  A L+  E  D ++ +++ Y++ALTP +   L    +P DP+  Q++P  
Sbjct: 2   KALHSVSDLVAAGLMTAEAGDAVRTVADRYAVALTPYLREALAGRTDPQDPLYAQYVPSP 61

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            E +  PEEREDPIGD   SP+KGIVHRYPDR+LLK LH C VYCRFCFRREMVG   G 
Sbjct: 62  AEAHSTPEEREDPIGDVARSPVKGIVHRYPDRVLLKPLHACAVYCRFCFRREMVGP-GGE 120

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            L++++ +AALAYI++  Q+WEV+ TGGDPL+LS +RL+ +++ L  + HV ++R HSR+
Sbjct: 121 ALTAEELDAALAYIRDHEQVWEVVITGGDPLLLSPRRLRGIVQALSAMPHVGVVRLHSRI 180

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P  DP R+ PEL++ L       +IA+H NH  E +    AA++RL  AGI L+ Q+VLL
Sbjct: 181 PAADPDRLTPELVEALTAPDLATWIAVHINHADELTAPVRAALARLVGAGIPLVGQTVLL 240

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           KGIND    L  L R  V  R+KPYYLHHPDLAAGTSHFR T+ EG+ +V  L+ K+SGL
Sbjct: 241 KGINDSHAALEALFRGMVRNRVKPYYLHHPDLAAGTSHFRPTLAEGRALVTGLRGKLSGL 300

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           CQP Y+LD+PGG+GK       I++ G   Y +TD    VHDY
Sbjct: 301 CQPTYVLDIPGGHGKAPAAPAWIEEEGEERYRVTDFTGRVHDY 343


>gi|156932380|ref|YP_001436296.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894]
 gi|156530634|gb|ABU75460.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894]
          Length = 342

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L +   I   E++   ++    +++ +    A  +   NP DP+ RQ +  +EE
Sbjct: 23  ITDPDELLHLLNIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTAREE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +  +S + G++H+Y +R LL +   C V CR+CFRR    +      
Sbjct: 83  FVAAPGFTTDPL-EEQNSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ +AAL YI    ++ E+IF+GGDPL+     L+ ++  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQAALDYIAAHPELDEIIFSGGDPLMAKDHELEWLVAHLEAIPHIRRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++ L E    V +  H NH  E  +     +++L  AG+ LL+QSVLLKG
Sbjct: 200 VIPARITDALVRLLGETRLQVLLVNHINHAQEIDDAFREGMAKLRAAGVTLLNQSVLLKG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LA L     +  + PYYLH  D   G +HF ++ +E + I+  L  ++SG   
Sbjct: 260 VNDNAATLAALSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSRVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|90424304|ref|YP_532674.1| hypothetical protein RPC_2807 [Rhodopseudomonas palustris BisB18]
 gi|90106318|gb|ABD88355.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18]
          Length = 368

 Score =  415 bits (1067), Expect = e-114,   Method: Composition-based stats.
 Identities = 177/349 (50%), Positives = 238/349 (68%), Gaps = 4/349 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL    +L    L+  +Q+  +  ++  Y++A+T  +A LI+P +P+DPIARQ+IP   E
Sbjct: 20  TLRQPAELAARGLVAADQLPTLDAVAQRYAVAVTEAVAALIDPTDPDDPIARQYIPSAAE 79

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   P ER DPIGD  H+PL GIVHR+ DR+L KL++VC VYCRFCFRRE VG  K   L
Sbjct: 80  LVRDPVERADPIGDAAHAPLDGIVHRHTDRVLFKLVNVCAVYCRFCFRRETVGPGKAATL 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S +   AAL YI+   +IWEVI TGGDPL+LS +RL + +  L  I HV+I+R HSRVP+
Sbjct: 140 SGEAYRAALDYIRAHPEIWEVILTGGDPLMLSPRRLGEAMSDLAAIDHVKIIRIHSRVPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            +P RI+ EL+  L+ +G  V++A+HANHP E S  A AA +R+ +AGI ++SQSVLL+G
Sbjct: 200 AEPSRISRELVGALQVSGATVWMALHANHPRELSAAARAACARIIDAGIPMVSQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   LA LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++  L+ ++SGLCQ
Sbjct: 260 VNDDGPTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRQLRGRVSGLCQ 319

Query: 307 PFYILDLPGGYGKVKIDTHNI----KKVGNGSYCITDHHNIVHDYPPKS 351
           P Y+LD+PGGYGK  +  + +    +   +  Y +TD+    H YPP S
Sbjct: 320 PDYVLDIPGGYGKAPVGPNYLTPADEPAADLRYRVTDYCGDAHLYPPTS 368


>gi|254292405|ref|YP_003058428.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC
           49814]
 gi|254040936|gb|ACT57731.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC
           49814]
          Length = 348

 Score =  414 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 165/344 (47%), Positives = 236/344 (68%), Gaps = 1/344 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           KTL SAQD  N  +   E    I  +S  Y++A+T  +A+ +   + +DP+ RQF+P  +
Sbjct: 3   KTLKSAQDFKNLGITSPEITQNIDTVSTKYAVAMTTELADCVKNPSSDDPVLRQFLPLID 62

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL  LPEEREDPIGD  ++P++GIVHR+ DR+LLK++ +CPVYCRFCFRREMVG  K  +
Sbjct: 63  ELTTLPEEREDPIGDWPNTPVEGIVHRHKDRVLLKIVSICPVYCRFCFRREMVGPDKDNM 122

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L  +  +AA+ YI    +IWEVI TGGDP++LS +R +++ + L  I HV+I+R+H+R+P
Sbjct: 123 LRPEQLDAAIDYIANHPEIWEVILTGGDPMMLSPRRARELTQRLEAIPHVKIIRWHTRMP 182

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +  P  +  E  Q +K + K V++A+HANH  EFS  A  A + L +AGI ++SQSVLLK
Sbjct: 183 VAKPDIVTAEYAQAIKSSTKSVFVALHANHANEFSNAAKQACANLIDAGIPMVSQSVLLK 242

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+ + L++LMRTFVE RI+PYYLHHPD A GTSHFR+++EEGQK+V  L+  +SGLC
Sbjct: 243 GVNDNLDALSDLMRTFVENRIRPYYLHHPDFAPGTSHFRVSVEEGQKLVQGLRNTLSGLC 302

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349
            P Y++D+PGG  K      + +++ +G   +         YPP
Sbjct: 303 TPTYVVDIPGGVSKAIATPSDAREI-DGQLSLRGQDGQWRAYPP 345


>gi|134299994|ref|YP_001113490.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum
           reducens MI-1]
 gi|134052694|gb|ABO50665.1| glutamate 2,3-aminomutase [Desulfotomaculum reducens MI-1]
          Length = 422

 Score =  414 bits (1066), Expect = e-114,   Method: Composition-based stats.
 Identities = 115/347 (33%), Positives = 187/347 (53%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ +   + +     +   + + I+++   Y  A++P    L        P+  Q 
Sbjct: 74  WQMANR-IKDVKVISQLIDLSPAEKEAIEKVGRQYRWAVSPYYMALAMVSGSGGPVWLQA 132

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  EE+       EDP+G+   SP++G+  RYPDR+++ + + C +YCR C RR  +G 
Sbjct: 133 IPCIEEVKDR-YGVEDPMGEEYTSPVEGVTRRYPDRLIINVTNQCAMYCRHCQRRRNIG- 190

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +     S K  E AL YI+E  +I +V+ TGGD L+LS ++++ +L  L  I HV+I R 
Sbjct: 191 EIDVHKSRKVLEGALQYIRENKEIRDVLITGGDALLLSDRQIEWLLTELDNIPHVEIKRL 250

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+  PQRI PEL + L+    P+YI    NHP E + EA  A   L  AG++L +Q
Sbjct: 251 GTRTPVTMPQRITPELCKILENHP-PIYINTQFNHPLEVTPEAKKACDMLVKAGVVLGNQ 309

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLK IN+ P+++  L ++ + +R++PYY+ H     GT HF   +++G  I+  L+  
Sbjct: 310 AVLLKNINNQPDVMKRLNQSLLTIRVRPYYIFHAKAVKGTRHFITGVDDGIAIMEQLRGY 369

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            SGL  P YI++ P GYGK  +    I +  N    +      +  Y
Sbjct: 370 TSGLAVPTYIINAPNGYGKTPVLPQYIIENKNDQVTLRTWEKRIIPY 416


>gi|189913041|ref|YP_001964930.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|189913370|ref|YP_001964599.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|167777717|gb|ABZ96017.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167781438|gb|ABZ99735.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 354

 Score =  414 bits (1065), Expect = e-113,   Method: Composition-based stats.
 Identities = 119/347 (34%), Positives = 189/347 (54%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QL+++ +T   DL     +  E+ D   +  + +  A+TP     I+  +P+ PI +Q 
Sbjct: 8   WQLQNR-ITQLADLETKITLTTEERDSFAKAYDQFQFAVTPYYLGRIDNKDPHCPIRKQI 66

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P+  EL     E +DP+ +  H P+KG+ HRYPDR +  + HVC VYCRFC R+  V +
Sbjct: 67  LPRAGELVRKQNETDDPLAEEIHMPVKGVTHRYPDRAIWYISHVCAVYCRFCTRKRKVST 126

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            + T  +  + E AL Y + ++++ EVI +GGDPL LS   L  +L  L+ I H+  +R 
Sbjct: 127 PEET-PNRSEWEKALDYFRGETKLKEVILSGGDPLTLSDSSLDYLLGELKKIPHLNQIRI 185

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLS 239
           H+R P+  P R+   L     +   P+Y+  H NHP E S+E     +  +    + + +
Sbjct: 186 HTRHPVTMPMRLTESLNSVFSKYF-PLYMVTHFNHPNEISDETKFYVMRMIKEGHVSIFN 244

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL GINDD  IL++L    + + IKPYYLH  D   G+S F + +E+G +I   L+ 
Sbjct: 245 QSVLLSGINDDANILSDLNYKLISIGIKPYYLHQCDEVFGSSDFVVPLEKGIEIYRKLRG 304

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
             SG+  P Y+ DL GG GKV +    ++K  +  Y   ++    ++
Sbjct: 305 FHSGITIPSYVKDLTGGGGKVLLSPDYLQKKTDKGYLFQNYLGDEYE 351


>gi|300920832|ref|ZP_07137231.1| KamA family protein [Escherichia coli MS 115-1]
 gi|300412197|gb|EFJ95507.1| KamA family protein [Escherichia coli MS 115-1]
          Length = 342

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLSAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|157147882|ref|YP_001455201.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895]
 gi|157085087|gb|ABV14765.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895]
          Length = 342

 Score =  413 bits (1063), Expect = e-113,   Method: Composition-based stats.
 Identities = 101/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I   E++   ++    +++ +       +   NPNDP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLNIDADEKLLAGRDAKRLFALRVPRSFIARMEKGNPNDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    +      
Sbjct: 83  FVTAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYADNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L      +   + +  H NH  E  +    A++ L NAG+ LL+QSVLL+G
Sbjct: 200 VIPARITDGLAARFARSSLQILLVNHINHANEIDDTFRQAMTTLRNAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L  ++SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARRIMRELLTRVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|293417652|ref|ZP_06660274.1| kamA family protein yjeK [Escherichia coli B185]
 gi|291430370|gb|EFF03368.1| kamA family protein yjeK [Escherichia coli B185]
          Length = 342

 Score =  412 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 101/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ I  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVITSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|220916509|ref|YP_002491813.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954363|gb|ACL64747.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 402

 Score =  412 bits (1061), Expect = e-113,   Method: Composition-based stats.
 Identities = 122/353 (34%), Positives = 183/353 (51%), Gaps = 5/353 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH  LT+A D      +   +       + H  +A TP  A+L++  +P  PI  Q 
Sbjct: 20  WQQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQV 78

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E    P + +DPIG+  H P++ IVH+YPDR L   +  C VYCR C RR +  S
Sbjct: 79  MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                      E  +A+++   ++ +VI +GGDPL LS ++L  +L  LR I HVQ+LR 
Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+ +P R+   L         P+++  H NHP E + EA  A  RL + G+ + +Q
Sbjct: 199 ATRAPVTNPMRVTDALAAA-LRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+N    IL +L    +  R++PYYLH  DLAAGT H R  +  G  I+ +++ +
Sbjct: 258 SVLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGR 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350
            SGL  P   +DLPGG GKV +    +   G      + + +     + YP  
Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGEEGARGHWLRNGRGERYFYPEP 370


>gi|260599504|ref|YP_003212075.1| kamA family protein YjeK [Cronobacter turicensis z3032]
 gi|260218681|emb|CBA34029.1| Uncharacterized kamA family protein yjeK [Cronobacter turicensis
           z3032]
          Length = 342

 Score =  412 bits (1060), Expect = e-113,   Method: Composition-based stats.
 Identities = 101/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L +   I   E++   ++    +++ +    A  +   NP DP+ RQ +  +EE
Sbjct: 23  ITDPDELLHLLNIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTSREE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +  +S + G++H+Y +R LL +   C V CR+CFRR    +      
Sbjct: 83  FVAAPGFTTDPL-EEQNSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ +AAL YI   +++ E+IF+GGDPL+     L+ ++  +  I H++ LR HSR+PI
Sbjct: 140 NKRNWQAALDYIAAHAELDEIIFSGGDPLMAKDHELEWLVANIEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++ L E    V +  H NH  E  +   A +++L  AG+ LL+QSVLLKG
Sbjct: 200 VIPARITDALVRLLGETRLQVLLVNHINHAQEIDDAFRAGMTKLRAAGVTLLNQSVLLKG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   L  L     +  + PYYLH  D   G +HF ++ +E + I+  L  ++SG   
Sbjct: 260 VNDNAATLTALSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSQVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|78223047|ref|YP_384794.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15]
 gi|78194302|gb|ABB32069.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15]
          Length = 344

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 118/341 (34%), Positives = 194/341 (56%), Gaps = 10/341 (2%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           ++T+ ++L     I  E +  +      Y + +T     LI    P D I RQ +P   E
Sbjct: 11  SITTPEELAELLDIDPEPLAPL---VRRYPLRITRRYLGLI--GKPGDAIWRQCVPDPCE 65

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L+   ++  DP+ +   SP+ G++HRYPDR++  + + C VYCRFC R+  VG       
Sbjct: 66  LDD--DQLSDPLDEERLSPVPGVIHRYPDRVVWLVSNECAVYCRFCMRKRRVGCPLAGSN 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                + A+ YI     I +VI +GGDPL+L  +RL+ +L  LR I HV+++R  +R P+
Sbjct: 124 GRSG-DDAVRYIAATPAIRDVILSGGDPLLLDDERLEAILARLRAIPHVEMIRIGTRTPV 182

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
             P+RI   L + LK    P+Y+  H NHP E + EA  A +RLA+ GI L +Q+VLL G
Sbjct: 183 TLPERITARLCRMLKRY-HPLYVNTHFNHPREITPEATKACARLADTGIPLGNQTVLLAG 241

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+P I+  LM+  + +R++PYY+H  DL  GT HFR  +  G  I+ +L+   SG+  
Sbjct: 242 VNDEPAIMTLLMQRLLAIRVRPYYIHQMDLVRGTGHFRTKVTTGLDIIGALRGHTSGMAT 301

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           P++++D  GG GK+ +    +++ G+ ++ + ++   + +Y
Sbjct: 302 PYFVIDAAGGKGKIPLLPDAVERRGD-TWLLRNYRGEIVEY 341


>gi|82779418|ref|YP_405767.1| hypothetical protein SDY_4389 [Shigella dysenteriae Sd197]
 gi|81243566|gb|ABB64276.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
          Length = 342

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|331655977|ref|ZP_08356965.1| putative radical SAM domain protein [Escherichia coli M718]
 gi|331046331|gb|EGI18421.1| putative radical SAM domain protein [Escherichia coli M718]
          Length = 342

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIERMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|15834381|ref|NP_313154.1| hypothetical protein ECs5127 [Escherichia coli O157:H7 str. Sakai]
 gi|168747993|ref|ZP_02773015.1| KamA family protein [Escherichia coli O157:H7 str. EC4113]
 gi|168755334|ref|ZP_02780341.1| KamA family protein [Escherichia coli O157:H7 str. EC4401]
 gi|168761014|ref|ZP_02786021.1| KamA family protein [Escherichia coli O157:H7 str. EC4501]
 gi|168766424|ref|ZP_02791431.1| KamA family protein [Escherichia coli O157:H7 str. EC4486]
 gi|168774523|ref|ZP_02799530.1| KamA family protein [Escherichia coli O157:H7 str. EC4196]
 gi|168780577|ref|ZP_02805584.1| KamA family protein [Escherichia coli O157:H7 str. EC4076]
 gi|168784782|ref|ZP_02809789.1| KamA family protein [Escherichia coli O157:H7 str. EC869]
 gi|168802345|ref|ZP_02827352.1| KamA family protein [Escherichia coli O157:H7 str. EC508]
 gi|195935938|ref|ZP_03081320.1| hypothetical protein EscherichcoliO157_05645 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208808559|ref|ZP_03250896.1| KamA family protein [Escherichia coli O157:H7 str. EC4206]
 gi|208813031|ref|ZP_03254360.1| KamA family protein [Escherichia coli O157:H7 str. EC4045]
 gi|208818769|ref|ZP_03259089.1| KamA family protein [Escherichia coli O157:H7 str. EC4042]
 gi|209396148|ref|YP_002273691.1| KamA family protein [Escherichia coli O157:H7 str. EC4115]
 gi|217325173|ref|ZP_03441257.1| KamA family protein [Escherichia coli O157:H7 str. TW14588]
 gi|254796168|ref|YP_003081005.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359]
 gi|261225269|ref|ZP_05939550.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261255480|ref|ZP_05948013.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK966]
 gi|291285561|ref|YP_003502379.1| KamA family protein [Escherichia coli O55:H7 str. CB9615]
 gi|13364604|dbj|BAB38550.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|187769928|gb|EDU33772.1| KamA family protein [Escherichia coli O157:H7 str. EC4196]
 gi|188017568|gb|EDU55690.1| KamA family protein [Escherichia coli O157:H7 str. EC4113]
 gi|189001809|gb|EDU70795.1| KamA family protein [Escherichia coli O157:H7 str. EC4076]
 gi|189357403|gb|EDU75822.1| KamA family protein [Escherichia coli O157:H7 str. EC4401]
 gi|189363903|gb|EDU82322.1| KamA family protein [Escherichia coli O157:H7 str. EC4486]
 gi|189368518|gb|EDU86934.1| KamA family protein [Escherichia coli O157:H7 str. EC4501]
 gi|189374875|gb|EDU93291.1| KamA family protein [Escherichia coli O157:H7 str. EC869]
 gi|189375646|gb|EDU94062.1| KamA family protein [Escherichia coli O157:H7 str. EC508]
 gi|208728360|gb|EDZ77961.1| KamA family protein [Escherichia coli O157:H7 str. EC4206]
 gi|208734308|gb|EDZ82995.1| KamA family protein [Escherichia coli O157:H7 str. EC4045]
 gi|208738892|gb|EDZ86574.1| KamA family protein [Escherichia coli O157:H7 str. EC4042]
 gi|209157548|gb|ACI34981.1| KamA family protein [Escherichia coli O157:H7 str. EC4115]
 gi|209750478|gb|ACI73546.1| hypothetical protein ECs5127 [Escherichia coli]
 gi|209750480|gb|ACI73547.1| hypothetical protein ECs5127 [Escherichia coli]
 gi|209750482|gb|ACI73548.1| hypothetical protein ECs5127 [Escherichia coli]
 gi|209750484|gb|ACI73549.1| hypothetical protein ECs5127 [Escherichia coli]
 gi|209750486|gb|ACI73550.1| hypothetical protein ECs5127 [Escherichia coli]
 gi|217321394|gb|EEC29818.1| KamA family protein [Escherichia coli O157:H7 str. TW14588]
 gi|254595568|gb|ACT74929.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359]
 gi|290765434|gb|ADD59395.1| KamA family protein [Escherichia coli O55:H7 str. CB9615]
 gi|320190719|gb|EFW65369.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. EC1212]
 gi|320638907|gb|EFX08553.1| putative lysine aminomutase [Escherichia coli O157:H7 str. G5101]
 gi|320644276|gb|EFX13341.1| putative lysine aminomutase [Escherichia coli O157:H- str. 493-89]
 gi|320649594|gb|EFX18118.1| putative lysine aminomutase [Escherichia coli O157:H- str. H 2687]
 gi|320654990|gb|EFX22951.1| putative lysine aminomutase [Escherichia coli O55:H7 str. 3256-97
           TW 07815]
 gi|320660497|gb|EFX27958.1| putative lysine aminomutase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320665766|gb|EFX32803.1| putative lysine aminomutase [Escherichia coli O157:H7 str. LSU-61]
 gi|326341801|gb|EGD65584.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1125]
 gi|326346624|gb|EGD70358.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1044]
          Length = 342

 Score =  412 bits (1059), Expect = e-113,   Method: Composition-based stats.
 Identities = 99/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|283786829|ref|YP_003366694.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
 gi|282950283|emb|CBG89930.1| radical SAM superfamily protein [Citrobacter rodentium ICC168]
          Length = 342

 Score =  411 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 101/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +  ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLQLDTDENLLAGRDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSQQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIAAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYTENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ +AAL YI    ++ E+IF+GGDPL+     L+ +L  L  I HV+ LR HSR+P+
Sbjct: 140 NKRNWQAALDYINAHPELDEIIFSGGDPLMAKDHELEWLLTRLEDIGHVKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL      +   + +  H NH  E   +   A+++L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITGELAARFARSSLQILLVNHINHANEIDGDFREAMAKLRAAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LA+L     +  + PYYLH  D   G +HF +T +E ++I+  L   ISG   
Sbjct: 260 VNDNARTLADLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLISGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  ID  
Sbjct: 320 PKLAREIGGEPSKTPIDLQ 338


>gi|309787707|ref|ZP_07682318.1| kamA family protein [Shigella dysenteriae 1617]
 gi|308924457|gb|EFP69953.1| kamA family protein [Shigella dysenteriae 1617]
          Length = 320

 Score =  411 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 1   MTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 60

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 61  FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 117

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 118 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 177

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L  AG+ LL+QSVLL+G
Sbjct: 178 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 237

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 238 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 297

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 298 PKLAREIGGEPSKTPLDLQ 316


>gi|39996853|ref|NP_952804.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA]
 gi|39983741|gb|AAR35131.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA]
 gi|298505867|gb|ADI84590.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens KN400]
          Length = 353

 Score =  411 bits (1058), Expect = e-113,   Method: Composition-based stats.
 Identities = 124/341 (36%), Positives = 190/341 (55%), Gaps = 10/341 (2%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            +T+A ++     I   Q   +  +   Y + +TP    L+    P DPI RQ IP   E
Sbjct: 11  AVTTADEITERFGIDAGQ---LAPVIRRYPMRITPGYLRLV--EAPGDPIWRQCIPDPAE 65

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L    +++ DP+ +   SP+ G++HRYPDR++  +   C VYCRFC R+  VG       
Sbjct: 66  LCD--DQQSDPLHEERLSPVPGLIHRYPDRVVWVVSGECAVYCRFCMRKRQVGCMTSRHC 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                   L YI E   I +VI +GGDPL+L  +RL+++L  L  I HV+++R  +R P+
Sbjct: 124 -EDPFGEPLRYIAETPAIRDVILSGGDPLLLDDERLEEILARLAAIPHVEMVRIGTRTPV 182

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
             P+RI   L + LK    P+Y+  H NHP E + EA  A +RLA+AGI L +QSVLL  
Sbjct: 183 TLPERITARLCRMLKRY-HPLYVNTHFNHPREITAEAAKACARLADAGIPLGNQSVLLAD 241

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDDP ++  LM+  + +R++PYY+H  DL  GT HFR  +  G +I+ +L+   SG+  
Sbjct: 242 VNDDPAVMTRLMQLLLSIRVRPYYIHQMDLVRGTGHFRTPVATGLEILTALRGNTSGMAT 301

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           P Y++D PGG GK+ +    I + G+  + +  +     +Y
Sbjct: 302 PHYVIDAPGGKGKIPLLPDCISRRGDL-WLLRTYTGETIEY 341


>gi|301023473|ref|ZP_07187251.1| KamA family protein [Escherichia coli MS 69-1]
 gi|300396989|gb|EFJ80527.1| KamA family protein [Escherichia coli MS 69-1]
          Length = 342

 Score =  411 bits (1057), Expect = e-113,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NPNDP+ RQ I  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|146309997|ref|YP_001175071.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638]
 gi|145316873|gb|ABP59020.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638]
          Length = 342

 Score =  411 bits (1057), Expect = e-113,   Method: Composition-based stats.
 Identities = 104/319 (32%), Positives = 168/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +TS  +L     I  ++ +   +E    +++ +       +   NPNDP+ +Q +  K+E
Sbjct: 23  ITSPDELLRLLNIDSDENMLAGREAKRLFALRVPRAFVARMEKGNPNDPLLKQVLTSKDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +  +S + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVTAPGFSTDPL-EEQNSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENPG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L+     +   + +  H NH  E  E   +A+ RL NAG+ LL+QSVLL+G
Sbjct: 200 VIPARITDGLVSRFAASPLQILLVNHINHANEIDETFRSAMMRLRNAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LA+L     +  + PYYLH  D   G +HF ++ EE ++IV  L   +SG   
Sbjct: 260 VNDNAQTLADLSNALFDASVMPYYLHVLDRVQGAAHFMVSDEEARQIVRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|118580185|ref|YP_901435.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus
           DSM 2379]
 gi|118502895|gb|ABK99377.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379]
          Length = 346

 Score =  411 bits (1057), Expect = e-113,   Method: Composition-based stats.
 Identities = 120/322 (37%), Positives = 186/322 (57%), Gaps = 6/322 (1%)

Query: 26  DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85
            E   ++  Y   ++P  A LI      D I +Q IP   EL+    +  DP+ ++  SP
Sbjct: 22  AEFTSVAASYPFRVSPSYAKLIRREG--DAIWKQCIPDLRELDD-AGQCPDPLAEHLLSP 78

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           + G++HRYPDR++L + + CPVYCRFC R+  VG +    + ++  + A+ YI     I 
Sbjct: 79  VPGLIHRYPDRVVLLVSNRCPVYCRFCMRKRHVG-EGDAPMDAQTLKQAMDYIAANPAIR 137

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           ++I +GGDPL+L    L  +L+ LR I HV I+R  +RVP+  P+R+ PEL   LK    
Sbjct: 138 DIILSGGDPLMLDDDSLHHILQQLRAIPHVTIIRIGTRVPVTLPERVTPELCTLLKRF-H 196

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           P+YI  H NHP E +  +  A   LA+AGI L +Q+VLL+G+ND  + + +L    + LR
Sbjct: 197 PLYINTHFNHPDEITPLSARACDLLADAGIPLGNQTVLLRGVNDSLDTMRSLQTGLLSLR 256

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           ++PYY+H  DL  GT+HFR  I  G +I+  L+  +SG+  P Y++DLP G GKV I   
Sbjct: 257 VRPYYIHQMDLVRGTAHFRTPIATGLEIIRGLRGHVSGMAVPQYVIDLPDGKGKVPILPD 316

Query: 326 NIKKVGNGSYCITDHHNIVHDY 347
           ++++ G+    +  +   +  Y
Sbjct: 317 DVERQGDL-LILRTYQGEMVRY 337


>gi|194434729|ref|ZP_03066981.1| KamA family protein [Shigella dysenteriae 1012]
 gi|194417010|gb|EDX33127.1| KamA family protein [Shigella dysenteriae 1012]
 gi|320180662|gb|EFW55589.1| Lysine 2,3-aminomutase [Shigella boydii ATCC 9905]
 gi|332083146|gb|EGI88377.1| kamA family protein [Shigella boydii 5216-82]
          Length = 342

 Score =  411 bits (1057), Expect = e-113,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|270264978|ref|ZP_06193241.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13]
 gi|270040912|gb|EFA14013.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13]
          Length = 342

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 169/323 (52%), Gaps = 4/323 (1%)

Query: 8   LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +     + + +E    +++ +    A  + P + NDP+ RQ +   EE
Sbjct: 23  ITDPDELLQLLSLNTHPDLPQGREARRLFALRVPRAFAARMRPGDANDPLLRQVLTASEE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FINAPGFTTDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  ++  L  I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLIGELEAIAHLKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI PEL + L  +   V +  H NH  E   E  A++++L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITPELCRRLSASRLQVLMVTHINHANEIDRELQASMAQLRLAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND+ + LA L     +  I PYY+H  D   G +HF ++ +E + I+ +L  K+SG   
Sbjct: 260 INDNADTLAALSNALFDAGILPYYIHVLDKVQGAAHFMVSDDEARAIMQALLSKVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTHNIKK 329
           P    ++ G   K  +D H ++ 
Sbjct: 320 PRLTREVGGKPSKTPLDLHLMQS 342


>gi|26251039|ref|NP_757079.1| hypothetical protein c5231 [Escherichia coli CFT073]
 gi|227886810|ref|ZP_04004615.1| lysine 2,3-aminomutase [Escherichia coli 83972]
 gi|300975007|ref|ZP_07172811.1| KamA family protein [Escherichia coli MS 45-1]
 gi|301047630|ref|ZP_07194695.1| KamA family protein [Escherichia coli MS 185-1]
 gi|26111471|gb|AAN83653.1|AE016771_164 Hypothetical protein yjeK [Escherichia coli CFT073]
 gi|227836152|gb|EEJ46618.1| lysine 2,3-aminomutase [Escherichia coli 83972]
 gi|300300482|gb|EFJ56867.1| KamA family protein [Escherichia coli MS 185-1]
 gi|300410421|gb|EFJ93959.1| KamA family protein [Escherichia coli MS 45-1]
 gi|307556316|gb|ADN49091.1| hypothetical protein YjeK [Escherichia coli ABU 83972]
 gi|315294049|gb|EFU53401.1| KamA family protein [Escherichia coli MS 153-1]
          Length = 342

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I  E+ +   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDAEEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|300940634|ref|ZP_07155196.1| KamA family protein [Escherichia coli MS 21-1]
 gi|306815636|ref|ZP_07449785.1| putative lysine aminomutase [Escherichia coli NC101]
 gi|331650273|ref|ZP_08351345.1| putative radical SAM domain protein [Escherichia coli M605]
 gi|331671299|ref|ZP_08372097.1| putative radical SAM domain protein [Escherichia coli TA280]
 gi|281181244|dbj|BAI57574.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|300454586|gb|EFK18079.1| KamA family protein [Escherichia coli MS 21-1]
 gi|305851298|gb|EFM51753.1| putative lysine aminomutase [Escherichia coli NC101]
 gi|330908490|gb|EGH37009.1| lysine 2,3-aminomutase [Escherichia coli AA86]
 gi|331040667|gb|EGI12825.1| putative radical SAM domain protein [Escherichia coli M605]
 gi|331071144|gb|EGI42501.1| putative radical SAM domain protein [Escherichia coli TA280]
          Length = 342

 Score =  411 bits (1056), Expect = e-112,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NPNDP+ RQ I  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|157368658|ref|YP_001476647.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans
           568]
 gi|157320422|gb|ABV39519.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans
           568]
          Length = 342

 Score =  410 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 104/319 (32%), Positives = 168/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +    ++ + +E    +++ +       + P + NDP+ RQ +   EE
Sbjct: 23  ITDPDELLQLLSLNTHPELPQGREARRLFALRVPRSFVARMQPGDANDPLLRQVLTASEE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FINAPGFTTDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  ++  L  I+H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLIGELEAIEHLKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI PEL + L  +   V +  H NH  E   E  A++++L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITPELCRRLSASRLQVLMVTHINHANEIDRELQASMAQLRLAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD + LA L     +  I PYY+H  D   G +HF ++ +E + I+ +L  KISG   
Sbjct: 260 INDDADTLAALSNALFDAGILPYYIHVLDKVQGAAHFMVSDDEARTIMQALLGKISGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D H
Sbjct: 320 PRLTREVGGKPSKTPLDLH 338


>gi|86158969|ref|YP_465754.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775480|gb|ABC82317.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 402

 Score =  410 bits (1055), Expect = e-112,   Method: Composition-based stats.
 Identities = 121/353 (34%), Positives = 183/353 (51%), Gaps = 5/353 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q RH  L +A D      +   +       + H  +A TP  A+LI+  +P  P+  Q 
Sbjct: 20  WQQRH-ALATAADFERLFPLTPAERRGFALAAGHTRVAATPYYASLIDRDHPGCPVRLQV 78

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E    P + +DPIG+  H P++ IVH+YPDR L   +  C VYCR C RR +  S
Sbjct: 79  MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                      E  +A+++   ++ +VI +GGDPL LS ++L  +L  LR I HVQ+LR 
Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +R P+ +P R+  E +        P+++  H NHP E + EA  A  RL + G+ + +Q
Sbjct: 199 ATRAPVTNPMRVT-EALAAALRRHAPLFVITHFNHPKECTPEAREACERLVDHGVPVENQ 257

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+N    IL +L    +  R++PYYLH  DLAAGT H R  +  G  I+ +++ +
Sbjct: 258 SVLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGR 317

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350
            SGL  P   +DLPGG GKV +    +   G      + + +     + YP  
Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGEEGARGHWLRNGRGERYFYPEP 370


>gi|91213696|ref|YP_543682.1| hypothetical protein UTI89_C4744 [Escherichia coli UTI89]
 gi|110644505|ref|YP_672235.1| hypothetical protein ECP_4390 [Escherichia coli 536]
 gi|117626495|ref|YP_859818.1| putative lysine aminomutase [Escherichia coli APEC O1]
 gi|191173357|ref|ZP_03034886.1| KamA family protein [Escherichia coli F11]
 gi|218561306|ref|YP_002394219.1| lysine aminomutase [Escherichia coli S88]
 gi|237703813|ref|ZP_04534294.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|300975204|ref|ZP_07172897.1| KamA family protein [Escherichia coli MS 200-1]
 gi|331660724|ref|ZP_08361656.1| putative radical SAM domain protein [Escherichia coli TA206]
 gi|91075270|gb|ABE10151.1| Hypothetical protein YjeK [Escherichia coli UTI89]
 gi|110346097|gb|ABG72334.1| hypothetical protein YjeK (radical SAM superfamily) [Escherichia
           coli 536]
 gi|115515619|gb|ABJ03694.1| putative lysine aminomutase [Escherichia coli APEC O1]
 gi|190906333|gb|EDV65943.1| KamA family protein [Escherichia coli F11]
 gi|218368075|emb|CAR05882.1| putative lysine aminomutase [Escherichia coli S88]
 gi|222035919|emb|CAP78664.1| Uncharacterized kamA family protein yjeK [Escherichia coli LF82]
 gi|226901725|gb|EEH87984.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|294490194|gb|ADE88950.1| KamA family protein [Escherichia coli IHE3034]
 gi|300308759|gb|EFJ63279.1| KamA family protein [Escherichia coli MS 200-1]
 gi|307629218|gb|ADN73522.1| putative lysine aminomutase [Escherichia coli UM146]
 gi|312948798|gb|ADR29625.1| putative lysine aminomutase [Escherichia coli O83:H1 str. NRG 857C]
 gi|315288493|gb|EFU47891.1| KamA family protein [Escherichia coli MS 110-3]
 gi|315297615|gb|EFU56892.1| KamA family protein [Escherichia coli MS 16-3]
 gi|323950784|gb|EGB46662.1| KamA family protein [Escherichia coli H252]
 gi|323955577|gb|EGB51340.1| KamA family protein [Escherichia coli H263]
 gi|324015063|gb|EGB84282.1| KamA family protein [Escherichia coli MS 60-1]
 gi|331051766|gb|EGI23805.1| putative radical SAM domain protein [Escherichia coli TA206]
          Length = 342

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NPNDP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|320193527|gb|EFW68164.1| Lysine 2,3-aminomutase [Escherichia coli WV_060327]
          Length = 342

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ I  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVITSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|218692484|ref|YP_002400696.1| putative lysine aminomutase [Escherichia coli ED1a]
 gi|218430048|emb|CAR11037.2| putative lysine aminomutase [Escherichia coli ED1a]
          Length = 342

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NPNDP+ RQ I  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRMPRSFIDRMEKGNPNDPLLRQVITSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|323965534|gb|EGB60988.1| KamA family protein [Escherichia coli M863]
 gi|327250088|gb|EGE61807.1| kamA family protein [Escherichia coli STEC_7v]
          Length = 342

 Score =  410 bits (1054), Expect = e-112,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|323975512|gb|EGB70613.1| KamA family protein [Escherichia coli TW10509]
          Length = 342

 Score =  409 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|218702846|ref|YP_002410475.1| putative lysine aminomutase [Escherichia coli IAI39]
 gi|218372832|emb|CAR20711.1| putative lysine aminomutase [Escherichia coli IAI39]
          Length = 342

 Score =  409 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ    ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVFTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|218707761|ref|YP_002415280.1| putative lysine aminomutase [Escherichia coli UMN026]
 gi|293402777|ref|ZP_06646874.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412]
 gi|293407873|ref|ZP_06651713.1| kamA family protein yjeK [Escherichia coli B354]
 gi|298378306|ref|ZP_06988190.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302]
 gi|300899683|ref|ZP_07117911.1| KamA family protein [Escherichia coli MS 198-1]
 gi|331665813|ref|ZP_08366707.1| putative radical SAM domain protein [Escherichia coli TA143]
 gi|218434858|emb|CAR15796.1| putative lysine aminomutase [Escherichia coli UMN026]
 gi|284924332|emb|CBG37448.1| radical SAM superfamily protein [Escherichia coli 042]
 gi|291429692|gb|EFF02706.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412]
 gi|291472124|gb|EFF14606.1| kamA family protein yjeK [Escherichia coli B354]
 gi|298280640|gb|EFI22141.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302]
 gi|300356752|gb|EFJ72622.1| KamA family protein [Escherichia coli MS 198-1]
 gi|331056864|gb|EGI28858.1| putative radical SAM domain protein [Escherichia coli TA143]
          Length = 342

 Score =  409 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NPNDP+ RQ I  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVEHFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|323189972|gb|EFZ75250.1| kamA family protein [Escherichia coli RN587/1]
 gi|324008615|gb|EGB77834.1| KamA family protein [Escherichia coli MS 57-2]
          Length = 342

 Score =  409 bits (1053), Expect = e-112,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|215489493|ref|YP_002331924.1| predicted lysine aminomutase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312965822|ref|ZP_07780048.1| kamA family protein [Escherichia coli 2362-75]
 gi|215267565|emb|CAS12020.1| predicted lysine aminomutase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312289065|gb|EFR16959.1| kamA family protein [Escherichia coli 2362-75]
          Length = 342

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ I  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLTGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVITSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|16131971|ref|NP_418570.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia
           coli str. K-12 substr. MG1655]
 gi|89110867|ref|AP_004647.1| predicted lysine aminomutase [Escherichia coli str. K-12 substr.
           W3110]
 gi|238903254|ref|YP_002929050.1| putative lysine aminomutase [Escherichia coli BW2952]
 gi|256025082|ref|ZP_05438947.1| putative lysine aminomutase [Escherichia sp. 4_1_40B]
 gi|301027965|ref|ZP_07191250.1| KamA family protein [Escherichia coli MS 196-1]
 gi|732002|sp|P39280|YJEK_ECOLI RecName: Full=Uncharacterized KamA family protein YjeK
 gi|536990|gb|AAA97045.1| ORF_f342 [Escherichia coli str. K-12 substr. MG1655]
 gi|1790589|gb|AAC77106.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia
           coli str. K-12 substr. MG1655]
 gi|85676898|dbj|BAE78148.1| predicted lysine aminomutase [Escherichia coli str. K12 substr.
           W3110]
 gi|238862637|gb|ACR64635.1| predicted lysine aminomutase [Escherichia coli BW2952]
 gi|260451026|gb|ACX41448.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli DH1]
 gi|299878944|gb|EFI87155.1| KamA family protein [Escherichia coli MS 196-1]
 gi|315138701|dbj|BAJ45860.1| putative lysine aminomutase [Escherichia coli DH1]
 gi|323380464|gb|ADX52732.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli KO11]
 gi|323940066|gb|EGB36260.1| KamA family protein [Escherichia coli E482]
          Length = 342

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I  E+ +   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDAEEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++C   +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+ 
Sbjct: 200 VIPARITEALVECFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRD 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|320539691|ref|ZP_08039355.1| putative lysine aminomutase [Serratia symbiotica str. Tucson]
 gi|320030303|gb|EFW12318.1| putative lysine aminomutase [Serratia symbiotica str. Tucson]
          Length = 342

 Score =  409 bits (1052), Expect = e-112,   Method: Composition-based stats.
 Identities = 103/322 (31%), Positives = 171/322 (53%), Gaps = 4/322 (1%)

Query: 8   LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L     +    ++ + ++    +++ +    A  + P + NDP+ RQ +  KEE
Sbjct: 23  ITNPDELLRLLSLSTHPELSQGRDARRLFALRVPRAFAARMRPGDANDPLLRQVLTAKEE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C + CR+CFRR           
Sbjct: 83  FINAPGFTTDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  ++  L  I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELGWLIGELAAIPHLKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI PEL + L  +   V +  H NH  E   E  AA+++L  AG+ LL+QSVL++ 
Sbjct: 200 VIPARITPELCRWLSASRLQVLMITHINHANEIDRELQAAMAQLRLAGVTLLNQSVLMRR 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD + LA L     +  I PYY+H  D   G +HF ++ +E + I+ +L  K+SG   
Sbjct: 260 INDDADTLAALSNALFDAGILPYYIHMLDKVQGATHFMVSDDEARTIMQALLSKVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTHNIK 328
           P    ++ G   K  +D H I+
Sbjct: 320 PRLTREVGGKPSKTPLDLHLIQ 341


>gi|168231369|ref|ZP_02656427.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
 gi|194472138|ref|ZP_03078122.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|194458502|gb|EDX47341.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CVM29188]
 gi|205334318|gb|EDZ21082.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Kentucky str. CDC 191]
          Length = 342

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 103/319 (32%), Positives = 171/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L +AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|218551416|ref|YP_002385208.1| lysine aminomutase [Escherichia fergusonii ATCC 35469]
 gi|218358958|emb|CAQ91618.1| putative lysine aminomutase [Escherichia fergusonii ATCC 35469]
 gi|324112256|gb|EGC06234.1| KamA family protein [Escherichia fergusonii B253]
 gi|325499684|gb|EGC97543.1| lysine aminomutase [Escherichia fergusonii ECD227]
          Length = 342

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|320354450|ref|YP_004195789.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032]
 gi|320122952|gb|ADW18498.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032]
          Length = 373

 Score =  409 bits (1051), Expect = e-112,   Method: Composition-based stats.
 Identities = 132/348 (37%), Positives = 192/348 (55%), Gaps = 9/348 (2%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L    +T  + L +A  I    ++ ++ +  HY + ++     LI  H    P+ +Q +P
Sbjct: 32  LSSTFITRPEQLAHALAIP---LEPLQAVHAHYPLRISAYYLQLIKQHGL--PLWKQAVP 86

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
             +ELN       DP+ + N SP+  +VH+YPDR L  +   C +YCRFC R+  VG + 
Sbjct: 87  DLKELNDSSG-LVDPLDEENLSPVPCLVHKYPDRALFLVCSECAMYCRFCTRKRKVG-KP 144

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
             V++ +   A L Y+     I +V+ +GGDP +L   RL+++LK LR I  V  +R  +
Sbjct: 145 DMVINDQTIAAGLEYLARTPAITDVLVSGGDPFMLPLSRLEQILKALRAIPSVVTIRIGT 204

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           RVP   P R+   L   LK+   P+YI  H NHP E + EA  A  RLA+AGI L  Q+V
Sbjct: 205 RVPCTLPSRVTLRLAAMLKKY-HPLYINTHFNHPAEITPEAALACGRLADAGIPLGCQTV 263

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LL+G+ND PE +  LMR  + +R+KPYYL   DL  GTSHFR TIE G  I+  L   +S
Sbjct: 264 LLRGVNDSPETIKMLMRQLLRIRVKPYYLFQADLTRGTSHFRTTIETGVDIMRQLIGHVS 323

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           G+  P Y LD PGG GK+ +  H I  +G  +   T + ++   YP +
Sbjct: 324 GMAVPTYALDAPGGGGKIPLTPHYINSLGK-TLEFTTYRHLPCSYPNE 370


>gi|194437302|ref|ZP_03069400.1| KamA family protein [Escherichia coli 101-1]
 gi|253775226|ref|YP_003038057.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254164078|ref|YP_003047186.1| putative lysine aminomutase [Escherichia coli B str. REL606]
 gi|297521176|ref|ZP_06939562.1| predicted lysine aminomutase [Escherichia coli OP50]
 gi|300929255|ref|ZP_07144732.1| KamA family protein [Escherichia coli MS 187-1]
 gi|194423858|gb|EDX39847.1| KamA family protein [Escherichia coli 101-1]
 gi|242379672|emb|CAQ34495.1| lysine 2,3-aminomutase [Escherichia coli BL21(DE3)]
 gi|253326270|gb|ACT30872.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253975979|gb|ACT41650.1| predicted lysine aminomutase [Escherichia coli B str. REL606]
 gi|253980135|gb|ACT45805.1| predicted lysine aminomutase [Escherichia coli BL21(DE3)]
 gi|300462790|gb|EFK26283.1| KamA family protein [Escherichia coli MS 187-1]
 gi|323960335|gb|EGB55974.1| KamA family protein [Escherichia coli H489]
 gi|323970596|gb|EGB65855.1| KamA family protein [Escherichia coli TA007]
          Length = 342

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P R+   L++        + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|157156524|ref|YP_001465646.1| KamA family protein [Escherichia coli E24377A]
 gi|157163612|ref|YP_001460930.1| KamA family protein [Escherichia coli HS]
 gi|191165672|ref|ZP_03027512.1| KamA family protein [Escherichia coli B7A]
 gi|193065734|ref|ZP_03046798.1| KamA family protein [Escherichia coli E22]
 gi|194428975|ref|ZP_03061508.1| KamA family protein [Escherichia coli B171]
 gi|209921637|ref|YP_002295721.1| hypothetical protein ECSE_4446 [Escherichia coli SE11]
 gi|218556701|ref|YP_002389615.1| putative lysine aminomutase [Escherichia coli IAI1]
 gi|218697896|ref|YP_002405563.1| putative lysine aminomutase [Escherichia coli 55989]
 gi|256019792|ref|ZP_05433657.1| putative lysine aminomutase [Shigella sp. D9]
 gi|260846979|ref|YP_003224757.1| putative lysine aminomutase [Escherichia coli O103:H2 str. 12009]
 gi|260858300|ref|YP_003232191.1| putative lysine aminomutase [Escherichia coli O26:H11 str. 11368]
 gi|260870945|ref|YP_003237347.1| putative lysine aminomutase [Escherichia coli O111:H- str. 11128]
 gi|293476459|ref|ZP_06664867.1| kamA family protein yjeK [Escherichia coli B088]
 gi|300816554|ref|ZP_07096775.1| KamA family protein [Escherichia coli MS 107-1]
 gi|300821239|ref|ZP_07101387.1| KamA family protein [Escherichia coli MS 119-7]
 gi|300905975|ref|ZP_07123700.1| KamA family protein [Escherichia coli MS 84-1]
 gi|300922447|ref|ZP_07138566.1| KamA family protein [Escherichia coli MS 182-1]
 gi|301302564|ref|ZP_07208694.1| KamA family protein [Escherichia coli MS 124-1]
 gi|301325908|ref|ZP_07219331.1| KamA family protein [Escherichia coli MS 78-1]
 gi|307312017|ref|ZP_07591654.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W]
 gi|309796959|ref|ZP_07691359.1| KamA family protein [Escherichia coli MS 145-7]
 gi|331671054|ref|ZP_08371887.1| putative radical SAM domain protein [Escherichia coli TA271]
 gi|331680279|ref|ZP_08380938.1| putative radical SAM domain protein [Escherichia coli H591]
 gi|332280930|ref|ZP_08393343.1| KamA family protein [Shigella sp. D9]
 gi|157069292|gb|ABV08547.1| KamA family protein [Escherichia coli HS]
 gi|157078554|gb|ABV18262.1| KamA family protein [Escherichia coli E24377A]
 gi|190904367|gb|EDV64076.1| KamA family protein [Escherichia coli B7A]
 gi|192926603|gb|EDV81233.1| KamA family protein [Escherichia coli E22]
 gi|194413028|gb|EDX29317.1| KamA family protein [Escherichia coli B171]
 gi|209914896|dbj|BAG79970.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218354628|emb|CAV01600.1| putative lysine aminomutase [Escherichia coli 55989]
 gi|218363470|emb|CAR01124.1| putative lysine aminomutase [Escherichia coli IAI1]
 gi|257756949|dbj|BAI28451.1| predicted lysine aminomutase [Escherichia coli O26:H11 str. 11368]
 gi|257762126|dbj|BAI33623.1| predicted lysine aminomutase [Escherichia coli O103:H2 str. 12009]
 gi|257767301|dbj|BAI38796.1| predicted lysine aminomutase [Escherichia coli O111:H- str. 11128]
 gi|291320912|gb|EFE60354.1| kamA family protein yjeK [Escherichia coli B088]
 gi|300402209|gb|EFJ85747.1| KamA family protein [Escherichia coli MS 84-1]
 gi|300421205|gb|EFK04516.1| KamA family protein [Escherichia coli MS 182-1]
 gi|300526128|gb|EFK47197.1| KamA family protein [Escherichia coli MS 119-7]
 gi|300530784|gb|EFK51846.1| KamA family protein [Escherichia coli MS 107-1]
 gi|300842089|gb|EFK69849.1| KamA family protein [Escherichia coli MS 124-1]
 gi|300847324|gb|EFK75084.1| KamA family protein [Escherichia coli MS 78-1]
 gi|306907824|gb|EFN38325.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W]
 gi|308119372|gb|EFO56634.1| KamA family protein [Escherichia coli MS 145-7]
 gi|315063463|gb|ADT77790.1| predicted lysine aminomutase [Escherichia coli W]
 gi|315255490|gb|EFU35458.1| KamA family protein [Escherichia coli MS 85-1]
 gi|320200721|gb|EFW75307.1| Lysine 2,3-aminomutase [Escherichia coli EC4100B]
 gi|323156036|gb|EFZ42198.1| kamA family protein [Escherichia coli EPECa14]
 gi|323171580|gb|EFZ57226.1| kamA family protein [Escherichia coli LT-68]
 gi|323182253|gb|EFZ67663.1| kamA family protein [Escherichia coli 1357]
 gi|323946085|gb|EGB42121.1| KamA family protein [Escherichia coli H120]
 gi|324019385|gb|EGB88604.1| KamA family protein [Escherichia coli MS 117-3]
 gi|324118714|gb|EGC12606.1| KamA family protein [Escherichia coli E1167]
 gi|331061643|gb|EGI33569.1| putative radical SAM domain protein [Escherichia coli TA271]
 gi|331071742|gb|EGI43078.1| putative radical SAM domain protein [Escherichia coli H591]
 gi|332103282|gb|EGJ06628.1| KamA family protein [Shigella sp. D9]
 gi|333010296|gb|EGK29729.1| kamA family protein [Shigella flexneri VA-6]
          Length = 342

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|193067826|ref|ZP_03048792.1| KamA family protein [Escherichia coli E110019]
 gi|192958801|gb|EDV89238.1| KamA family protein [Escherichia coli E110019]
          Length = 342

 Score =  408 bits (1049), Expect = e-112,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|323176095|gb|EFZ61687.1| kamA family protein [Escherichia coli 1180]
 gi|333011130|gb|EGK30544.1| kamA family protein [Shigella flexneri K-272]
          Length = 320

 Score =  407 bits (1048), Expect = e-112,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 1   MTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 60

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 61  FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 117

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 118 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 177

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 178 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 237

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 238 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 297

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 298 PKLAREIGGEPSKTPLDLQ 316


>gi|74314635|ref|YP_313054.1| hypothetical protein SSON_4330 [Shigella sonnei Ss046]
 gi|73858112|gb|AAZ90819.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 342

 Score =  407 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DPI RQ +  ++E
Sbjct: 23  VTDPGELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPILRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|333012676|gb|EGK32056.1| kamA family protein [Shigella flexneri K-227]
          Length = 342

 Score =  407 bits (1048), Expect = e-111,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGKPSKTPLDLQ 338


>gi|323166756|gb|EFZ52513.1| kamA family protein [Shigella sonnei 53G]
          Length = 320

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DPI RQ +  ++E
Sbjct: 1   MTDPGELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPILRQVLTSQDE 60

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 61  FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 117

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 118 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 177

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 178 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 237

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 238 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 297

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 298 PKLAREIGGEPSKTPLDLQ 316


>gi|332346225|gb|AEE59559.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 342

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P R+   L++        + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDNVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|238750049|ref|ZP_04611552.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC
           43380]
 gi|238711593|gb|EEQ03808.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC
           43380]
          Length = 335

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 98/318 (30%), Positives = 163/318 (51%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +   + +       + + +       + P NP+DP+  Q +  +EE
Sbjct: 15  ITDPDELLRILFLNEHPDLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQVLTAREE 74

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 75  FITAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  +L  L  I H++ LR H+R+P+
Sbjct: 132 NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDNELSWLLDELESIPHIKRLRIHTRLPV 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L E+   V +  H NH  E  ++   ++++L  AG+ LL+QSVLL+G
Sbjct: 192 VIPARITAALCQRLSESRLQVLMVTHINHANEIDQDLRDSMAQLKRAGVTLLNQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD E+LA L     +  I PYY+H  D   G +HF +  +E ++++  L  ++SG   
Sbjct: 252 VNDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 312 PRLAREIGGQPSKTPLDL 329


>gi|15804738|ref|NP_290779.1| hypothetical protein Z5751 [Escherichia coli O157:H7 EDL933]
 gi|12519128|gb|AAG59345.1|AE005648_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
          Length = 342

 Score =  407 bits (1047), Expect = e-111,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDP +     L  +L  L  I H++  R HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPXMAKDHELDWLLTQLEAIPHIKRXRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|329114964|ref|ZP_08243719.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001]
 gi|326695407|gb|EGE47093.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001]
          Length = 349

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 159/342 (46%), Positives = 218/342 (63%), Gaps = 8/342 (2%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R KTL +  DL  A L+  +Q + + +++ HY+ A+ P   +LI   +P+DPI  Q +P 
Sbjct: 11  RRKTLRTPDDLIAAGLVPPQQHEMLDDVAQHYATAIPPAFLDLI--TSPDDPIGVQVVPS 68

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
            +EL I PEER DPIGDN  SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG   G
Sbjct: 69  AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
            VL     E AL +++   QI EVI TGGDPL+LS +RL  ++  L  + HV  +R HSR
Sbjct: 129 -VLDDAALEQALEWLRTHKQIREVILTGGDPLMLSPRRLGHIVAELSRMPHVTTIRVHSR 187

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+ DP+R+   L+  L E  K +++A+H NH  E SE A A + R+   GI LL QSVL
Sbjct: 188 VPVADPERVTDALLDAL-ETNKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+ND  + L +L R  VE R++PYYLH  D A GT+HF + +EEGQ+++A L+ +++G
Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
           L  P Y+LD+PGGYGKV +    ++    G   + D     H
Sbjct: 307 LAWPLYVLDIPGGYGKVPLGPEYVQ----GPQQVKDPKGETH 344


>gi|237729080|ref|ZP_04559561.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908809|gb|EEH94727.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 342

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 101/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L +   I   E++   ++    +++ +       +   NP+DP+ RQ +  +EE
Sbjct: 23  VTDPDELLHLLNIDADEKLLAGRDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTAQEE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVAAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + A+ YI    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQVAIDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+S L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEGLVERFAHSSLQILLVNHINHANEIDETFRQAMSSLRAAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARRIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|300715020|ref|YP_003739823.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
 gi|299060856|emb|CAX57963.1| conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 342

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 161/319 (50%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +    ++    +    +++ +    A+ +   +P DP+  Q I   +E
Sbjct: 23  ITDPNELLQLLGLDSHPELTAGSDARRLFALRVPRAFASRMQKGDPQDPLLLQVITASQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ + + S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FVDAPGYSTDPLDEQS-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YI+E+ ++ E+IF+GGDPL+     L  ++  L  I H++ LR HSR+P+
Sbjct: 140 NKRNWQQALEYIREQPELDEIIFSGGDPLMAKDSELDWLIGELEQIPHLKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L ++   V +  H NH  E  +    A+  L +AG+ LL+QSVLL+ 
Sbjct: 200 VIPSRITRTLCQRLAQSRLQVLMVTHINHAQEIDDALRDALQLLKSAGVTLLNQSVLLRN 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD   LA L     +  + PYYLH  D   G +HF ++ ++ + I+  L   +SG   
Sbjct: 260 INDDATTLATLSNALFDAGVLPYYLHVLDKVQGAAHFYVSDDDARAIMRELLANVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|161617604|ref|YP_001591569.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167553577|ref|ZP_02347326.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|168822537|ref|ZP_02834537.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194444516|ref|YP_002043593.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|200386594|ref|ZP_03213206.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205355095|ref|YP_002228896.1| hypothetical protein SG4176 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207859482|ref|YP_002246133.1| hypothetical protein SEN4103 [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|161366968|gb|ABX70736.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403179|gb|ACF63401.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Newport str. SL254]
 gi|199603692|gb|EDZ02237.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Virchow str. SL491]
 gi|205274876|emb|CAR39942.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205322004|gb|EDZ09843.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA29]
 gi|205341061|gb|EDZ27825.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|206711285|emb|CAR35663.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|320088762|emb|CBY98520.1| L-lysine 2,3-aminomutase LAM; KAM [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|326630252|gb|EGE36595.1| hypothetical protein SG9_4262 [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 9]
          Length = 342

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|294675951|ref|YP_003576566.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003]
 gi|294474771|gb|ADE84159.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003]
          Length = 350

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 159/347 (45%), Positives = 211/347 (60%), Gaps = 5/347 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            LT  +DL    L+   Q+ ++ +++  + I +TP +   I    P DP+A QF+P   E
Sbjct: 8   ALTRPEDLLAEGLVTPGQMPDLTQVAQDFRIRVTPAMRAAI--TAPADPVAAQFVPSAAE 65

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   PEER DPIGD  HSP  G+ HRYPDR +L +   C VYCRFCFRRE VG  +   L
Sbjct: 66  LITRPEERADPIGDAVHSPAPGLTHRYPDRAILHITKTCDVYCRFCFRRETVG--ETGPL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
              D   AL YI     + E+I TGGDPL LS +RL+ VL  L  I H+  LRFHSRVP+
Sbjct: 124 PEPDLAQALEYIAATPALREIILTGGDPLTLSPRRLEDVLTRLSAIPHITTLRFHSRVPV 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+RI P L+  L+     V++ +H NH  E +  A AA++RL +AG+ LLSQSVLLKG
Sbjct: 184 VAPERITPALVALLRAQRPAVWVVVHTNHAQELTAPARAALARLVDAGVPLLSQSVLLKG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + L +L R   + R+KPYYLHH DLA GT HFR TI  G+ ++A L+  +SG   
Sbjct: 244 VNDSHDALRDLFRALQDCRVKPYYLHHCDLAPGTGHFRTTIAAGRALMAGLRGPLSGAAI 303

Query: 307 PFYILDLPGGYGKVKIDTHNI-KKVGNGSYCITDHHNIVHDYPPKSS 352
           P Y+LD+PGG+GKV I   ++      G + +TD    VHDY   +S
Sbjct: 304 PTYVLDIPGGFGKVPITADHVAPGARPGLWRVTDWRGGVHDYADPAS 350


>gi|170021843|ref|YP_001726797.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC
           8739]
 gi|169756771|gb|ACA79470.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC
           8739]
          Length = 342

 Score =  407 bits (1046), Expect = e-111,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPEDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|198243525|ref|YP_002218222.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|197938041|gb|ACH75374.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Dublin str. CT_02021853]
 gi|326626024|gb|EGE32369.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Dublin str. 3246]
          Length = 342

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|170679776|ref|YP_001746542.1| KamA family protein [Escherichia coli SMS-3-5]
 gi|170517494|gb|ACB15672.1| KamA family protein [Escherichia coli SMS-3-5]
          Length = 342

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 99/319 (31%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NPNDP+ RQ I  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQIALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+ 
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRD 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|258541375|ref|YP_003186808.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01]
 gi|256632453|dbj|BAH98428.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01]
 gi|256635510|dbj|BAI01479.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-03]
 gi|256638565|dbj|BAI04527.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-07]
 gi|256641619|dbj|BAI07574.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-22]
 gi|256644674|dbj|BAI10622.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-26]
 gi|256647729|dbj|BAI13670.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-32]
 gi|256650782|dbj|BAI16716.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256653773|dbj|BAI19700.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-12]
          Length = 349

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 159/342 (46%), Positives = 217/342 (63%), Gaps = 8/342 (2%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R KTL +  DL  A L+  +Q + + +++ HY+ A+ P   +LI    P+DPI  Q +P 
Sbjct: 11  RRKTLRTPDDLIAAGLVPPKQHEMLDDVAQHYATAIPPAFLDLI--TAPDDPIGVQVVPS 68

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
            +EL I PEER DPIGDN  SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG   G
Sbjct: 69  AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
            VL     E AL +++   QI EVI TGGDPL+LS +RL  ++  L  + HV  +R HSR
Sbjct: 129 -VLDDAALEQALEWLRTHEQIREVILTGGDPLMLSPRRLGHIVAALSAMPHVTTIRVHSR 187

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+ DP+R+   L+  L E  K +++A+H NH  E SE A A + R+   GI LL QSVL
Sbjct: 188 VPVADPERVTDALLDAL-ETDKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+ND  + L +L R  VE R++PYYLH  D A GT+HF + +EEGQ+++A L+ +++G
Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
           L  P Y+LD+PGGYGKV +    ++    G   + D     H
Sbjct: 307 LAWPLYVLDIPGGYGKVPLGPDYVQ----GPKQVKDPKGTTH 344


>gi|204926922|ref|ZP_03218124.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|204323587|gb|EDZ08782.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Javiana str. GA_MM04042433]
 gi|322615499|gb|EFY12419.1| hypothetical protein SEEM315_10044 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618559|gb|EFY15448.1| hypothetical protein SEEM971_10303 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622028|gb|EFY18878.1| hypothetical protein SEEM973_17977 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322627100|gb|EFY23892.1| hypothetical protein SEEM974_00362 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631059|gb|EFY27823.1| hypothetical protein SEEM201_05188 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322637722|gb|EFY34423.1| hypothetical protein SEEM202_03729 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322642386|gb|EFY38990.1| hypothetical protein SEEM954_03902 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322645647|gb|EFY42172.1| hypothetical protein SEEM054_18690 [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650513|gb|EFY46921.1| hypothetical protein SEEM675_15304 [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322653465|gb|EFY49795.1| hypothetical protein SEEM965_03844 [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659708|gb|EFY55951.1| hypothetical protein SEEM19N_08219 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322662081|gb|EFY58297.1| hypothetical protein SEEM801_16251 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322666170|gb|EFY62348.1| hypothetical protein SEEM507_03054 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672590|gb|EFY68701.1| hypothetical protein SEEM877_15409 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676020|gb|EFY72091.1| hypothetical protein SEEM867_14623 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322680504|gb|EFY76542.1| hypothetical protein SEEM180_12388 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684602|gb|EFY80606.1| hypothetical protein SEEM600_17732 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192917|gb|EFZ78143.1| hypothetical protein SEEM581_21258 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323197207|gb|EFZ82347.1| hypothetical protein SEEM501_11096 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323201676|gb|EFZ86740.1| hypothetical protein SEEM460_21711 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323206190|gb|EFZ91152.1| hypothetical protein SEEM020_11145 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323213200|gb|EFZ98002.1| hypothetical protein SEEM6152_12673 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323215572|gb|EGA00316.1| hypothetical protein SEEM0077_07868 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219558|gb|EGA04043.1| hypothetical protein SEEM0047_21028 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323227861|gb|EGA12015.1| hypothetical protein SEEM0055_19496 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229030|gb|EGA13159.1| hypothetical protein SEEM0052_05250 [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323236358|gb|EGA20434.1| hypothetical protein SEEM3312_18736 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237522|gb|EGA21583.1| hypothetical protein SEEM5258_19717 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241812|gb|EGA25841.1| hypothetical protein SEEM1156_12637 [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248039|gb|EGA31976.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2009159199]
 gi|323254629|gb|EGA38440.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008282]
 gi|323258311|gb|EGA41988.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008283]
 gi|323259588|gb|EGA43222.1| hypothetical protein SEEM8284_10232 [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323265861|gb|EGA49357.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008285]
 gi|323270305|gb|EGA53753.1| putative lysine aminomutase [Salmonella enterica subsp. enterica
           serovar Montevideo str. IA_2010008287]
          Length = 342

 Score =  406 bits (1045), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|213052305|ref|ZP_03345183.1| hypothetical protein Salmoneentericaenterica_04842 [Salmonella
           enterica subsp. enterica serovar Typhi str. E00-7866]
 gi|213428698|ref|ZP_03361448.1| hypothetical protein SentesTyphi_26121 [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
          Length = 342

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|261823176|ref|YP_003261282.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae
           WPP163]
 gi|261607189|gb|ACX89675.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae
           WPP163]
          Length = 348

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 100/318 (31%), Positives = 163/318 (51%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +    ++ +  +    +++ +    A  +   +P+DP+  Q +  +EE
Sbjct: 23  ITDPDELLQLLALNDHAKLRQGTDARRLFALRVPRAFAARMQKGDPDDPLLLQVLTAREE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FIATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  ++  L +I H++ LR HSR+P+
Sbjct: 140 NKANWRQALDYIRQHPELNEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L   L  +   V +  H NHP E   +   +++RL  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  E LA L     +  I PYYLH  D   G +HF +   E + +V +L +K+SG   
Sbjct: 260 VNDSAETLAQLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARVLVKALMKKVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PRLAREIGGEASKTPLDL 337


>gi|168467049|ref|ZP_02700897.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
 gi|195630645|gb|EDX49257.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Newport str. SL317]
          Length = 342

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNALTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|168237064|ref|ZP_02662122.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|194737300|ref|YP_002117279.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|194712802|gb|ACF92023.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197290014|gb|EDY29373.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
          Length = 342

 Score =  406 bits (1044), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSHLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|30065523|ref|NP_839694.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T]
 gi|30043787|gb|AAP19506.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T]
 gi|281603612|gb|ADA76596.1| KamA family protein [Shigella flexneri 2002017]
 gi|313646382|gb|EFS10844.1| kamA family protein [Shigella flexneri 2a str. 2457T]
 gi|332749021|gb|EGJ79444.1| kamA family protein [Shigella flexneri K-671]
 gi|332749289|gb|EGJ79710.1| kamA family protein [Shigella flexneri 4343-70]
 gi|332761892|gb|EGJ92166.1| kamA family protein [Shigella flexneri 2747-71]
 gi|332763192|gb|EGJ93435.1| kamA family protein [Shigella flexneri 2930-71]
 gi|333009379|gb|EGK28835.1| kamA family protein [Shigella flexneri K-218]
 gi|333011918|gb|EGK31303.1| kamA family protein [Shigella flexneri K-304]
          Length = 342

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|161505162|ref|YP_001572274.1| hypothetical protein SARI_03299 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160866509|gb|ABX23132.1| hypothetical protein SARI_03299 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 342

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 172/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+  E++   ++  + +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEANEKLRAGQDARHLFALRVPRAFIARMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+P+
Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITNELVARFDQSRLQILLVNHTNHANEVDEAFCLAMKKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNAKTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMITDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|62182782|ref|YP_219199.1| hypothetical protein SC4212 [Salmonella enterica subsp. enterica
           serovar Choleraesuis str. SC-B67]
 gi|62130415|gb|AAX68118.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322717283|gb|EFZ08854.1| Elongator protein [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 342

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWRVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G++LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVMLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|224586177|ref|YP_002639976.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|224470705|gb|ACN48535.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
          Length = 342

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G++LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVMLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|310816895|ref|YP_003964859.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium
           vulgare Y25]
 gi|308755630|gb|ADO43559.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium
           vulgare Y25]
          Length = 343

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 152/340 (44%), Positives = 205/340 (60%), Gaps = 14/340 (4%)

Query: 18  NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
            LI       ++ ++  + + +TP +   I   +  D +  QF+P + ELN+LP E  DP
Sbjct: 4   GLISPADAAALRPVTETFRMRITPQMRTAITRAD--DGVGLQFVPDRRELNVLPSELTDP 61

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
           IGD  HSP KGI HRYPDR++  +  VC VYCRFCFRRE+VG     VL + D  AAL Y
Sbjct: 62  IGDGAHSPTKGITHRYPDRVIFHVTQVCEVYCRFCFRREVVGENG--VLPAGDVAAALDY 119

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
           I+    I EVI TGGDPL LS +RL ++   L  I HV ++R H+RVP+V P RI PE+I
Sbjct: 120 IRRTPAINEVILTGGDPLSLSPRRLHEITTALAAIPHVGLMRIHTRVPVVAPNRITPEMI 179

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEA----------IAAISRLANAGIILLSQSVLLKGI 247
             L   G   ++ +H NHP EF  EA          +AA+  L  AG+ LLSQSVLL+G+
Sbjct: 180 AALTAPGLQTWLVLHTNHPQEFIPEAGGALEFIPEAVAALDLLRTAGVPLLSQSVLLRGV 239

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND   +L +L  T + L +KPYYLHH DLA GTSH+R TI  G+ ++ +L+ +ISG   P
Sbjct: 240 NDSVAVLKSLFTTLLRLGVKPYYLHHCDLARGTSHYRTTIAAGRALMRALRGQISGSALP 299

Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            Y+LD+PGG+GKV I         +G + +TD +   H Y
Sbjct: 300 TYVLDIPGGFGKVPITADYFDGGADGRWQVTDPNGGTHIY 339


>gi|296114565|ref|ZP_06833218.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295978921|gb|EFG85646.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 351

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 145/341 (42%), Positives = 214/341 (62%), Gaps = 4/341 (1%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +TL + +DL  A L+ +     ++ +++ Y+ A+ P  A LI   +P+DPI  Q IP   
Sbjct: 11  RTLRTVRDLVEAGLVSQAAQPALEAVAHDYATAIPPAFAALI--EHPDDPIGLQVIPDPA 68

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL+   EER DPIGD+  SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG   G V
Sbjct: 69  ELHTTTEERSDPIGDDALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG-V 127

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L     E AL +++    I EVI +GGDP++LS +R+  +++ L  + HV  +R H+RVP
Sbjct: 128 LDDAALERALDWLRAHPAIGEVILSGGDPMMLSPRRMGHIIRALEAMPHVHTIRIHTRVP 187

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP+R+  +++  L +    +++ IHANH  E + +A  AI R+    I +++QSVLL+
Sbjct: 188 VADPERVTADMMAAL-DTTCSLWMVIHANHARELTPQARKAIRRMQAQAIPVIAQSVLLR 246

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND P+ L +L+R  V  R+KPYYLH  D A GTS FR+ I EGQ+++A+L+ +++GL 
Sbjct: 247 GVNDTPQALEDLLRALVAARVKPYYLHQLDPAPGTSRFRVPIAEGQRLLAALRGRVTGLA 306

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
            P Y+LD+PGG+GKV I    +  V      + D     H 
Sbjct: 307 WPTYVLDIPGGHGKVPIGPGYLDTVEGMGMQVRDPQGRPHR 347


>gi|289809541|ref|ZP_06540170.1| hypothetical protein Salmonellaentericaenterica_35962 [Salmonella
           enterica subsp. enterica serovar Typhi str. AG3]
          Length = 337

 Score =  406 bits (1043), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 18  VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 77

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 78  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 134

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 135 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 194

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G
Sbjct: 195 VIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 254

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 255 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 314

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 315 PRLAREIGGEPSKTPLDLQ 333


>gi|290476545|ref|YP_003469450.1| putative aminomutase [Xenorhabdus bovienii SS-2004]
 gi|289175883|emb|CBJ82686.1| putative aminomutase [Xenorhabdus bovienii SS-2004]
          Length = 343

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 97/318 (30%), Positives = 158/318 (49%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +     + E  E    + + +    A  +   +P+DP+  Q +  +EE
Sbjct: 23  ITDPDELLQLLSLNTHAMLKEGNEAKRLFPLRVPRAFAARMKKGDPHDPLLLQVLTAQEE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR      +    
Sbjct: 83  FETHPGFSTDPL-EEQHSAVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY--EDNKG 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  + + AL YI++  ++ E+IF+GGDPL+     L  ++  L  I H++ LR H+R+P+
Sbjct: 140 NKNNWQLALDYIEQHPELDEIIFSGGDPLMAKDHELDWLMTRLESISHIKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L    +++   + +  H NH  E        +  L  AG+ LL+QSVLL+ 
Sbjct: 200 VIPDRITLSLCNRFEKSQLQIIMVTHINHANEIDNTFRDKMMWLKQAGVTLLNQSVLLRN 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + LA+L  T  +  I PYY+H  D   G +HF +  EE + I+  L  KISG   
Sbjct: 260 VNDSADTLADLSNTLFDAGILPYYIHILDKVQGAAHFLVGDEEAKAIMRELLTKISGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PCLAREIGGEPSKTPLDL 337


>gi|16767582|ref|NP_463197.1| aminomutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|167994785|ref|ZP_02575876.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|168244887|ref|ZP_02669819.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194447368|ref|YP_002048381.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|197248033|ref|YP_002149252.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197263424|ref|ZP_03163498.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|16422895|gb|AAL23156.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|194405672|gb|ACF65891.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|197211736|gb|ACH49133.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Agona str. SL483]
 gi|197241679|gb|EDY24299.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Saintpaul str. SARA23]
 gi|205327405|gb|EDZ14169.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205336322|gb|EDZ23086.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|261249429|emb|CBG27293.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267996666|gb|ACY91551.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 14028S]
 gi|301160825|emb|CBW20356.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312915434|dbj|BAJ39408.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. T000240]
 gi|321223208|gb|EFX48278.1| Lysine 2,3-aminomutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|323132674|gb|ADX20104.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
 gi|332991147|gb|AEF10130.1| putative aminomutase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. UK-1]
          Length = 342

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKLRHVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|283834764|ref|ZP_06354505.1| KamA family protein [Citrobacter youngae ATCC 29220]
 gi|291069009|gb|EFE07118.1| KamA family protein [Citrobacter youngae ATCC 29220]
          Length = 342

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 165/319 (51%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L +   +   E++   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLHLLNLDADEKLLAGRDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTAQQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVAEPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQVALDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L      +   + +  H NH  E  E    A+ RL  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEGLADRFAHSSLQILLVNHINHANEVDETFRQAMVRLRTAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|16763155|ref|NP_458772.1| hypothetical protein STY4693 [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29144634|ref|NP_807976.1| hypothetical protein t4385 [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|213621858|ref|ZP_03374641.1| hypothetical protein SentesTyp_31779 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648405|ref|ZP_03378458.1| hypothetical protein SentesTy_14649 [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213865531|ref|ZP_03387650.1| hypothetical protein SentesT_37675 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|25305130|pir||AH1045 conserved hypothetical protein yjeK [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16505463|emb|CAD06813.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29140273|gb|AAO71836.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 342

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|308273444|emb|CBX30046.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.]
          Length = 359

 Score =  405 bits (1042), Expect = e-111,   Method: Composition-based stats.
 Identities = 130/342 (38%), Positives = 201/342 (58%), Gaps = 11/342 (3%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           ++T  ++L     + K +ID I     +Y + + P   +LI   + N PI +Q +P  +E
Sbjct: 26  SITKPEELIRILPVDKSKIDRI---IEYYPMRINPYYFSLIK--HKNCPIGKQAVPDMQE 80

Query: 67  LNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           +  +    + DP+ +   SP+  ++HRYP R+L  +   C +YCRFC R+  VG      
Sbjct: 81  IEDINILSDPDPLCEEIQSPVPNLIHRYPGRVLFMVSAECAMYCRFCMRKRKVGY---NS 137

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           ++ K     L YI+    I EV+ +GGDPL+L  +++ ++LK LR I H++ILR HSR+P
Sbjct: 138 ITDKTITMGLEYIKNNKSICEVVISGGDPLLLEDEKIDRILKDLRAIDHIEILRIHSRIP 197

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
              PQRI  +L+  L++   P++I IH NHP E +EEA  A S LA+AGI L  Q+VLL 
Sbjct: 198 CTLPQRITKDLVDILRQY-HPLFINIHFNHPDEITEEAALACSALADAGIPLGCQTVLLN 256

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GIN++ EI+  LM+  + +R+KPYY+H  D+  G  HF+ T++EG  I+ SL    SGLC
Sbjct: 257 GINNNAEIMKTLMKKLLMIRVKPYYIHQLDVVRGNHHFKATVKEGLNIMQSLYGY-SGLC 315

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            P Y++DLPGG GKV +     K   + S    ++ + + +Y
Sbjct: 316 VPQYMIDLPGGGGKVPLLPQYFKTFSDDSISFINYEDKLFEY 357


>gi|24115503|ref|NP_710013.1| hypothetical protein SF4302 [Shigella flexneri 2a str. 301]
 gi|24054828|gb|AAN45720.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
          Length = 342

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|311281298|ref|YP_003943529.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae
           SCF1]
 gi|308750493|gb|ADO50245.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae
           SCF1]
          Length = 342

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 3/303 (0%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           E +   +E    +++ +       +   NPNDP+ +Q I  ++E    P    DP+ +  
Sbjct: 39  EDLLAGREAKRLFALRVPRAFVARMEKGNPNDPLLKQVITSQDEFVAAPGFSTDPL-EEQ 97

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           HS + G++H+Y +R LL +   C V CR+CFRR    ++     + ++ + ALAYI    
Sbjct: 98  HSVVPGLLHKYLNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQVALAYIAAHP 155

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           ++ E+IF+GGDPL+     L  ++  L  I H++ LR HSR+P+V P RI   L +    
Sbjct: 156 ELDEIIFSGGDPLMAKDHELDWLISELEAIPHIKRLRIHSRLPVVIPARITGALAERFAR 215

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           +   + +  H NH  E  ++  AA+  L  AG+ LL+QSVLL+G+ND+ + LANL     
Sbjct: 216 SSLQILLVNHINHAQEIDDDFRAAMKTLRQAGVTLLNQSVLLRGVNDNAQTLANLSNALF 275

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           +  + PYYLH  D   G +HF ++ +E + IV  L   ISG   P    ++ G   K  +
Sbjct: 276 DAGVMPYYLHVLDKVQGAAHFMVSDDEARTIVRELLTLISGYMVPKLAREIGGEPSKTPL 335

Query: 323 DTH 325
           D  
Sbjct: 336 DLQ 338


>gi|188496002|ref|ZP_03003272.1| KamA family protein [Escherichia coli 53638]
 gi|254037160|ref|ZP_04871237.1| KamA family protein [Escherichia sp. 1_1_43]
 gi|300949103|ref|ZP_07163147.1| KamA family protein [Escherichia coli MS 116-1]
 gi|300957803|ref|ZP_07169983.1| KamA family protein [Escherichia coli MS 175-1]
 gi|301646590|ref|ZP_07246457.1| KamA family protein [Escherichia coli MS 146-1]
 gi|307140841|ref|ZP_07500197.1| hypothetical protein EcolH7_22227 [Escherichia coli H736]
 gi|312974047|ref|ZP_07788218.1| kamA family protein [Escherichia coli 1827-70]
 gi|331644894|ref|ZP_08346011.1| putative radical SAM domain protein [Escherichia coli H736]
 gi|188491201|gb|EDU66304.1| KamA family protein [Escherichia coli 53638]
 gi|226840266|gb|EEH72268.1| KamA family protein [Escherichia sp. 1_1_43]
 gi|300315484|gb|EFJ65268.1| KamA family protein [Escherichia coli MS 175-1]
 gi|300451442|gb|EFK15062.1| KamA family protein [Escherichia coli MS 116-1]
 gi|301075207|gb|EFK90013.1| KamA family protein [Escherichia coli MS 146-1]
 gi|309704652|emb|CBJ04002.1| radical SAM superfamily protein [Escherichia coli ETEC H10407]
 gi|310331581|gb|EFP98837.1| kamA family protein [Escherichia coli 1827-70]
 gi|323935461|gb|EGB31799.1| KamA family protein [Escherichia coli E1520]
 gi|331035869|gb|EGI08107.1| putative radical SAM domain protein [Escherichia coli H736]
          Length = 342

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+ 
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRD 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|238764091|ref|ZP_04625046.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii
           ATCC 33638]
 gi|238697762|gb|EEP90524.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii
           ATCC 33638]
          Length = 335

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 96/318 (30%), Positives = 164/318 (51%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L    L+ +   + +       + + +     + + P NP+DP+  Q +  +EE
Sbjct: 15  ITDPDELLRILLLNEHPNLQQGTAARRLFPLRVPRAFVSRMQPGNPSDPLLLQVLTAREE 74

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P   +DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 75  FIAAPGFTDDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL Y+++  ++ E+IF+GGDPL+     L  +L  +  I H++ LR H+R+P+
Sbjct: 132 NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWLLDEIESISHIKRLRIHTRLPV 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL Q L  +   V +  H NH  E       ++++L  AG+ LL+QSVLL+G
Sbjct: 192 VIPARITTELCQRLSNSRLQVVMVTHINHANEIDASFRDSMAQLKQAGVTLLNQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +N+D E+LA L     +  I PYY+H  D   G +HF +  +E ++++  L  ++SG   
Sbjct: 252 VNNDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLRRVSGYLV 311

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 312 PRLTREVGGQPSKTPLDL 329


>gi|168263313|ref|ZP_02685286.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
 gi|205348035|gb|EDZ34666.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Hadar str. RI_05P066]
          Length = 342

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLLAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|56416128|ref|YP_153203.1| hypothetical protein SPA4150 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197365054|ref|YP_002144691.1| hypothetical protein SSPA3854 [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56130385|gb|AAV79891.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197096531|emb|CAR62140.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
          Length = 342

 Score =  405 bits (1041), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAVHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLHHVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|253690127|ref|YP_003019317.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium
           carotovorum subsp. carotovorum PC1]
 gi|251756705|gb|ACT14781.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium
           carotovorum subsp. carotovorum PC1]
          Length = 351

 Score =  404 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +    ++ +  +    +++ +    A  +   NP+DP+  Q +  +EE
Sbjct: 23  ITDPDELLQLLALNDHAKLRQGNDARRLFALRVPRAFAARMQKGNPDDPLLLQVLTAREE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FTATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  ++  L +I H++ LR HSR+P+
Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L   L  +   V +  H NHP E   +   A++RL  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDALCDRLSRSSLQVLLVTHINHPQEIDTDLTQAMARLRRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + LA L     +  I PYYLH  D   G +HF +   E + +V +L +K+SG   
Sbjct: 260 VNDSADTLAQLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARILVKALLKKVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PRLAREIGGEASKTPLDL 337


>gi|29899154|gb|AAP03121.1| arginine aminomutase [Streptomyces griseochromogenes]
          Length = 410

 Score =  404 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 113/346 (32%), Positives = 183/346 (52%), Gaps = 8/346 (2%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
             +R + +T+             +   I E +  Y  ++TP  A+L++P +P  P+ +Q 
Sbjct: 31  WHMRKR-ITNLDKAREWIRPTPLEEKAIAETAGKYRWSVTPYYASLMDPDDPGCPVRQQA 89

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   EL        DP+GD  +     +VH+YPDR+++ +   CPVYCR C R+     
Sbjct: 90  VPALGELMEFSGAEVDPVGDMYYRRTNRVVHKYPDRVIMLITEACPVYCRHCTRKFHTTD 149

Query: 121 QKGTVLSS---KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
             GT       +D    L YI +  +I +V+ TGGDPL     +L++++  LR I  V+I
Sbjct: 150 VDGTYFERNEGEDFSEDLRYIADHPEIRDVLLTGGDPLSYRDGKLEEIIAGLRAIPSVEI 209

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R  SR P++ PQR+ PEL + L     PV++  H NHP E + E+  AI RL   GI +
Sbjct: 210 IRIGSRFPVLLPQRVTPELCEMLARY-HPVWLNTHFNHPKEITPESERAIDRLLRHGIPV 268

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+VLL+GINDD   +  LM   + +R++PYYL+H D   G SHF  ++E+G +I+  L
Sbjct: 269 GNQTVLLRGINDDLGTMRRLMTELLRIRVRPYYLYHCDNVTGVSHFMTSVEKGWEIMEGL 328

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
           +  I+G   P Y+L      GK+ +     ++  +G   + ++   
Sbjct: 329 QGHITGFGVPQYVLTT--RLGKIPMVRPYYRETPDG-LVLRNYRGE 371


>gi|227113817|ref|ZP_03827473.1| hypothetical protein PcarbP_12668 [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 335

 Score =  404 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 103/325 (31%), Positives = 166/325 (51%), Gaps = 4/325 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
           MQ     +T   +L     +    ++ +  +    +++ +    A  +   NP+DP+  Q
Sbjct: 1   MQQLADVITDPDELLQLLALNDHAKLRQGSDARRLFALRVPRAFAARMQKGNPDDPLLLQ 60

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +  +EE    P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    
Sbjct: 61  VLTAREEFIATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 119

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                  +  +   AL YI++  ++ E+IF+GGDPL+     L  ++  L +I H++ LR
Sbjct: 120 QDNQG--NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLR 177

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+P+V P RI   L   L  +   V +  H NHP E   +   +++RL  AG+ LL+
Sbjct: 178 IHSRLPVVIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRAGVTLLN 237

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+G+ND+ E LA L     +  I PYYLH  D   G +HF +   E + +V +L +
Sbjct: 238 QSVLLRGVNDNAETLARLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARILVKALLK 297

Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
           K+SG   P    ++ G   K  +D 
Sbjct: 298 KVSGYLVPRLAREIGGEASKTPLDL 322


>gi|227326240|ref|ZP_03830264.1| hypothetical protein PcarcW_02548 [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 335

 Score =  404 bits (1040), Expect = e-111,   Method: Composition-based stats.
 Identities = 104/325 (32%), Positives = 167/325 (51%), Gaps = 4/325 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
           MQ     +T   +L     +    ++ +  +    +++ +    A  +   NP+DP+  Q
Sbjct: 1   MQQLADVITDPDELLQLLALNDHAKLRQGSDARRLFALRVPRAFAARMQKGNPDDPLLLQ 60

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +  +EE    P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    
Sbjct: 61  VLTAREEFIATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 119

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                  +  +   AL YI++ S++ E+IF+GGDPL+     L  ++  L +I H++ LR
Sbjct: 120 QDNQG--NKANWRQALDYIRQHSELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLR 177

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+P+V P RI   L   L  +   V +  H NHP E   +   +++RL  AG+ LL+
Sbjct: 178 IHSRLPVVIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRAGVTLLN 237

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+G+ND+ E LA L     +  I PYYLH  D   G +HF +   E + +V +L +
Sbjct: 238 QSVLLRGVNDNAETLARLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARVLVKALLK 297

Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
           K+SG   P    ++ G   K  +D 
Sbjct: 298 KVSGYLVPRLAREIGGEASKTPLDL 322


>gi|110808069|ref|YP_691589.1| hypothetical protein SFV_4304 [Shigella flexneri 5 str. 8401]
 gi|110617617|gb|ABF06284.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
          Length = 342

 Score =  404 bits (1039), Expect = e-111,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
             P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 AIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|238912798|ref|ZP_04656635.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Tennessee str. CDC07-0191]
          Length = 342

 Score =  404 bits (1039), Expect = e-111,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G
Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKLRHVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   
Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338


>gi|183598065|ref|ZP_02959558.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827]
 gi|188022847|gb|EDU60887.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827]
          Length = 342

 Score =  404 bits (1039), Expect = e-111,   Method: Composition-based stats.
 Identities = 98/325 (30%), Positives = 169/325 (52%), Gaps = 4/325 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           Q   + +T+  +L     ++  Q   +  +    + + +     + +   +P DP+  Q 
Sbjct: 17  QQLAEAITNPDELLQILGLESHQASKDGNDARKLFPLRVPRPFISRMKKGDPQDPLLLQV 76

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +  K E +  P    DP+ + N++ +  ++H+Y +R L+ +   C V CR+CFRR     
Sbjct: 77  LTAKAEFDTYPGFSTDPLDEQNNA-IPSLLHKYHNRALMLVKGGCAVNCRYCFRRHFPY- 134

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +    +  +   A+ YI+  +++ E+IF+GGDPL+     L  ++  L  I H++ LR 
Sbjct: 135 -EDNKGNKNNWLIAVDYIKNHTELNEIIFSGGDPLMAKDSELDWLIGQLEAIPHIKRLRI 193

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           HSR+P+V P+RI   L Q L  +   V +  H NH  E  +   AA+ +L NAG+ LL+Q
Sbjct: 194 HSRLPVVIPERITTNLCQRLAHSRLQVIMVTHLNHANEIDDHFKAAMQKLKNAGVTLLNQ 253

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+G+N+D + LANL     +  I PYYLH  D   G +HF ++ +E + ++  L  K
Sbjct: 254 SVLLRGVNNDADTLANLSNALFDAGILPYYLHVLDKVQGAAHFLVSDQEARLLIQQLLGK 313

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
           +SG   P    ++ G   K  +D +
Sbjct: 314 VSGYLVPKLAREIGGEPSKTLLDLN 338


>gi|119384403|ref|YP_915459.1| lysine 2,3-aminomutase YodO family protein [Paracoccus
           denitrificans PD1222]
 gi|119374170|gb|ABL69763.1| L-lysine 2,3-aminomutase [Paracoccus denitrificans PD1222]
          Length = 366

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 159/345 (46%), Positives = 216/345 (62%), Gaps = 4/345 (1%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L  + +T+   L  A L    + + + +++  + I ++P +   +    P D IA QF+P
Sbjct: 21  LSQRPITTVPALVEAGLADPARAEVLDKVAAEFRIRISPAMREAM--GAPGDGIAAQFVP 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              EL I PEE  DPI D   SP  G+ HRYPDR++L +   C VYCRFCFRRE+VG + 
Sbjct: 79  DARELQIRPEELADPISDAAFSPTPGLTHRYPDRVILHVTRTCEVYCRFCFRREVVGEEG 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
              L   D  AAL Y+     I EVI TGGDP++LS +R+  ++  L  I HV I+RFH+
Sbjct: 139 --TLPEPDLAAALDYVARTPAIHEVILTGGDPMVLSPRRIAALMARLEAIPHVDIVRFHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           RVP+V P RI+  ++  L      V++ IH NH  E +  A AA++RLA+AGI LLSQ+V
Sbjct: 197 RVPVVAPSRIDAAMLAALHPRRLAVWVVIHTNHAQELTAGARAALARLADAGIPLLSQTV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKG+N DPE+LA+L R  +  R+KPYYLHH DLA GT HFR TI EGQ I+A L+ ++S
Sbjct: 257 LLKGVNADPEVLADLFRALIRNRVKPYYLHHCDLARGTGHFRTTIAEGQAIMAGLRGRLS 316

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           G C P Y+LDLPGG+GKV +   ++K+ G G Y I D     H+Y
Sbjct: 317 GTCLPTYVLDLPGGHGKVPLGPDHVKETGPGRYLIRDWRGKDHEY 361


>gi|82546608|ref|YP_410555.1| hypothetical protein SBO_4310 [Shigella boydii Sb227]
 gi|187731271|ref|YP_001882838.1| KamA family protein [Shigella boydii CDC 3083-94]
 gi|81248019|gb|ABB68727.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|187428263|gb|ACD07537.1| KamA family protein [Shigella boydii CDC 3083-94]
 gi|320176659|gb|EFW51700.1| Lysine 2,3-aminomutase [Shigella dysenteriae CDC 74-1112]
 gi|320187554|gb|EFW62238.1| Lysine 2,3-aminomutase [Shigella flexneri CDC 796-83]
 gi|332087151|gb|EGI92285.1| kamA family protein [Shigella boydii 3594-74]
          Length = 349

 Score =  404 bits (1038), Expect = e-110,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 163/315 (51%), Gaps = 4/315 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +     + +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+ 
Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRD 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVK 321
           P    ++ G   K  
Sbjct: 320 PKLAREIGGEPSKTP 334


>gi|170766549|ref|ZP_02901002.1| KamA family protein [Escherichia albertii TW07627]
 gi|170123987|gb|EDS92918.1| KamA family protein [Escherichia albertii TW07627]
 gi|315617559|gb|EFU98165.1| kamA family protein [Escherichia coli 3431]
          Length = 342

 Score =  403 bits (1037), Expect = e-110,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTDPDELLRLLKIDANEKLLAGRSAKKLFALRVPRSFIERMEKGNPDDPLLRQVLTSQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  YIAAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWKVALEYVAAHPELDEIIFSGGDPLMAKDHELDWLLTQLETIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|307132783|ref|YP_003884799.1| lysine 2,3-aminomutase [Dickeya dadantii 3937]
 gi|306530312|gb|ADN00243.1| lysine 2,3-aminomutase [Dickeya dadantii 3937]
          Length = 347

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 101/328 (30%), Positives = 168/328 (51%), Gaps = 4/328 (1%)

Query: 8   LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +    Q+   ++    + + +    A  + P +  DP+  Q +  ++E
Sbjct: 23  ITDPDELLRLLALDTHPQLSAGRDARKLFPLRVPRAFAARMRPGDARDPLLLQVLTAQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FIVTPGFSHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI+++ Q+ E+IF+GGDPL+     L  +L  L  I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQQPQLDEIIFSGGDPLMAKDHELDWLLNELEQIPHLKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL Q L ++   V +  H NH  E   E   +++RL  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITAELCQRLAQSSLRVVLVTHINHANEIDAEFTDSMARLRRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LA L     +  I PYYLH  D   G +HF +  +E + ++  L  ++SG   
Sbjct: 260 VNDNADTLAALSNALFDAGILPYYLHVLDKVQGAAHFLVPDDEARALIRELMTQVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGS 334
           P    ++ G   K  +D    ++  N +
Sbjct: 320 PSLTREIGGEASKTLLDIGMPQRQENQN 347


>gi|238787518|ref|ZP_04631316.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii
           ATCC 33641]
 gi|238724305|gb|EEQ15947.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii
           ATCC 33641]
          Length = 335

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 96/324 (29%), Positives = 166/324 (51%), Gaps = 4/324 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +   + +       + + +       + P NP+DP+  Q +  +EE
Sbjct: 15  ITDPDELLRILFLNEHPSLQQGSAARRLFPLRVPRAFVARMQPGNPSDPLLLQVLTAREE 74

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P   +DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 75  FIAAPGFTDDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  + + AL YI++  ++ E+IF+GGDPL+     L  ++  L  I H++ LR HSR+P+
Sbjct: 132 NKANWQQALDYIRQHPELDEIIFSGGDPLMAKDSELSWLVGELESITHIKRLRIHSRLPV 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI P L Q L ++   V +  H NH  E       ++++L  AG+ LL+QSVLL+G
Sbjct: 192 VIPARITPALCQLLGDSRLQVLMVTHINHANEIDSSFRDSMAQLKRAGVTLLNQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +N+D ++LA L     +  I PYY+H  D   G +HF +  +E ++++  L  ++SG   
Sbjct: 252 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVNDDEARQLMKGLLSRVSGYLV 311

Query: 307 PFYILDLPGGYGKVKIDTHNIKKV 330
           P    ++ G   K  +D   ++  
Sbjct: 312 PRLAREIGGQPSKTPLDLRLMQSE 335


>gi|317493548|ref|ZP_07951969.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316918491|gb|EFV39829.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 344

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 161/319 (50%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +    +  +  +    +++ +    A  +   +PNDP+  Q +    E
Sbjct: 23  ITEPAELLEYLALSDSPEWQKGHDARRLFALRVPYAFARRMKKGDPNDPLLLQVMTSASE 82

Query: 67  LNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
               P    DP+ + + +  + G++H+Y +R LL +   C V CR+CFRR          
Sbjct: 83  FITTPGYSTDPLEEQDDAIAVPGLLHKYINRALLLVKGGCAVNCRYCFRRHFPYQDNQG- 141

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            +  +   AL YI+++ ++ E+IF+GGDPL+     L  +L  +  I H++ LR HSR+P
Sbjct: 142 -NKANWRQALDYIRQQPELDEIIFSGGDPLMAKDHELAWLLDEIEAIPHIKRLRIHSRLP 200

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P RI   L +   ++   + +  H NH  E   E   A++RL +AG+ LL+Q VLL+
Sbjct: 201 VVIPARITETLTKRFSQSHLQILLVTHINHANEIDRELCDAMTRLKHAGVTLLNQGVLLR 260

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+ + LA L     +  I PYYLH  D   G +HF ++ +E + I+  L  K+SG  
Sbjct: 261 GVNDNADTLAALSNALFDAGIMPYYLHVLDRVQGAAHFMVSDDEARVIMRELMTKVSGYM 320

Query: 306 QPFYILDLPGGYGKVKIDT 324
            P    ++ G   K  ID 
Sbjct: 321 VPKLTREIGGEPSKTPIDL 339


>gi|332083734|gb|EGI88952.1| kamA family protein [Shigella dysenteriae 155-74]
          Length = 301

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 96/297 (32%), Positives = 160/297 (53%), Gaps = 3/297 (1%)

Query: 29  KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
           +     +++ +     + +   NP+DP+ RQ +  ++E  I P    DP+ +  HS + G
Sbjct: 4   RNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPG 62

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           ++H+Y +R LL +   C V CR+CFRR    ++     + ++ + AL Y+    ++ E+I
Sbjct: 63  LLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMI 120

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           F+GGDPL+     L  +L  L  I H++ LR HSR+PIV P RI   L++    +   + 
Sbjct: 121 FSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITEALVERFSHSTLQIL 180

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           +  H NH  E  E    A+++L  AG+ LL+QSVLL+G+ND+ + LANL     +  + P
Sbjct: 181 LVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMP 240

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           YYLH  D   G +HF ++ +E ++I+  L   +SG   P    ++ G   K  +D  
Sbjct: 241 YYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLDLQ 297


>gi|331681166|ref|ZP_08381803.1| putative radical SAM domain protein [Escherichia coli H299]
 gi|331081387|gb|EGI52548.1| putative radical SAM domain protein [Escherichia coli H299]
          Length = 342

 Score =  403 bits (1036), Expect = e-110,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     I   E++   +     +++ +       +   NP+DP+ RQ +  +EE
Sbjct: 23  VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIERMEKGNPDDPLLRQVLTSQEE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  YIVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL Y+    ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PI
Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L++    +   + +  H NH  E  E    A+++L   G+  L+QSVLL+G
Sbjct: 200 VIPARITDALVERFAHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTQLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + LANL     +  + PYYLH  D   G +HF ++ +E ++I+  L   +SG   
Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFVVSDDEARQIMRELLTLVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|295098305|emb|CBK87395.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 342

 Score =  402 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 100/303 (33%), Positives = 162/303 (53%), Gaps = 3/303 (0%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
           E +   +E    +++ +       +   NP DP+ +Q +  ++E    P    DP+ +  
Sbjct: 39  EALRAGREAKRLFALRVPRAFVARMEKGNPGDPLLKQTLTSQDEFITAPGYSTDPL-EEQ 97

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           +S + G++H+Y +R LL +   C V CR+CFRR    ++     + ++ + AL YI    
Sbjct: 98  NSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQVALDYIAAHP 155

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+PIV P RI   L+  L++
Sbjct: 156 ELDEIIFSGGDPLMAKDHELDWLLTQLETIPHIKRLRIHSRLPIVIPARITDALVTRLEQ 215

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           +   V +  H NH  E   +  AA++R+  AG+ LL+QSVLL+G+ND   +LA+L     
Sbjct: 216 SRLQVLLVNHINHANEIDADFRAAMARMRKAGVTLLNQSVLLRGVNDSARVLADLSNALF 275

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           +  + PYYLH  D   G +HF +T EE +KI+  L   +SG   P    ++ G   K  +
Sbjct: 276 DAGVMPYYLHVLDRVQGAAHFMVTDEEARKIMRELLTLVSGYMVPKLAREIGGEPSKTPL 335

Query: 323 DTH 325
           D  
Sbjct: 336 DLQ 338


>gi|28899620|ref|NP_799225.1| hypothetical protein VP2846 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260364033|ref|ZP_05776761.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030]
 gi|260876639|ref|ZP_05888994.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034]
 gi|260898079|ref|ZP_05906575.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466]
 gi|260902332|ref|ZP_05910727.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037]
 gi|28807872|dbj|BAC61109.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308085822|gb|EFO35517.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466]
 gi|308093973|gb|EFO43668.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034]
 gi|308110956|gb|EFO48496.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037]
 gi|308114570|gb|EFO52110.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030]
          Length = 340

 Score =  402 bits (1035), Expect = e-110,   Method: Composition-based stats.
 Identities = 98/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +       ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  +E  +      DP+ +   + + G++H+Y +R+L+ +   C V CR+CFRR     +
Sbjct: 78  PLSDEFEVHAGYSNDPLDEQ-DNAIPGLLHKYKNRVLMIVKGGCAVNCRYCFRRHFPYQE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
             +    +     + Y+ EK ++ EVIF+GGDPL+     +  +L+ +  I H++ LR H
Sbjct: 137 NKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIAKIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL Q LK +   + +  H NH  E ++E   A+ +L  A + LL+Q 
Sbjct: 195 SRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKLKEANVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  + L+ L     +  I PYYLH  D   G +HF +  E  ++++A L E +
Sbjct: 255 VLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERARQLMAGLLENV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLIPTLTREIGGRKSKTPLDLH 338


>gi|85858714|ref|YP_460916.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
 gi|85721805|gb|ABC76748.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB]
          Length = 339

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 111/332 (33%), Positives = 176/332 (53%), Gaps = 5/332 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+R++ + S + L             ++ +   Y  ++TP   +LI   +P+DPI  Q 
Sbjct: 11  WQVRNR-IRSGRQLAELLKEAPIAAGSLRAVIRTYPFSITPYYFSLIREGDPDDPIRFQC 69

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E++      +DP+ ++   P+ G++HRY DR L+     C +YCR C R+     
Sbjct: 70  VPDPREVSFSLGGVDDPLEESRDMPVPGLIHRYADRCLIMATSKCMMYCRHCNRKRRW-- 127

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            K          A + Y+     I EVI +GGDPL L  K L + L  LR I HV++LR 
Sbjct: 128 -KAGAADRAPLRAMIDYVAATPGIREVIVSGGDPLTLPEKVLDEFLGALRAIPHVEVLRI 186

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR+P+V P RI   L++ L++   P++     N P E + E+  A  RL +AGI + +Q
Sbjct: 187 GSRIPVVLPMRITVPLVRILRKHR-PLWFNTQFNSPREITPESAEACERLVDAGIPVSNQ 245

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLLKGINDD E +  L+     + ++PYYL   D   G  HFR+   +G +++  +  +
Sbjct: 246 SVLLKGINDDYETMRRLLYGLQRISVRPYYLFQCDPVRGADHFRVDFWKGMEMMERISRQ 305

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
            SGLC P Y++D+PGG GK+ + T ++    +
Sbjct: 306 TSGLCLPRYVIDVPGGKGKMSLQTFSLLADSD 337


>gi|332994506|gb|AEF04561.1| lysine 2,3-aminomutase YodO family protein [Alteromonas sp. SN2]
          Length = 341

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 166/319 (52%), Gaps = 3/319 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + TS + L +   +  +  ++  +    + + +    A+L+   NPNDP+  Q +P K+E
Sbjct: 23  SFTSPEKLLSFLDLPSKDYEQDSKARRLFPMRVPRHFASLMEKGNPNDPLFLQVMPLKQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
            +I P   +DP+ + + +  KG++H+Y  R+LL +   C V CR+CFRR    +     +
Sbjct: 83  FSIEPGYTKDPL-EEHDTAGKGLLHKYDSRVLLMVRTGCAVNCRYCFRRHFPYA--DNAV 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +    + AL YI     I EVIF+GGDPL+     L  + K +  I H++ LR H+R+P+
Sbjct: 140 NKAQWQEALDYIAGNPAINEVIFSGGDPLMAKDDHLAALAKEIAAIPHIKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+R++        +      + +HANH  E S    + + +L   G+ LL+QSVLLK 
Sbjct: 200 VLPERLDNAFFDWFTQLPIQKILVLHANHSNEVSPALKSRLEKLRTHGVTLLNQSVLLKD 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + +  L     +  + PYYLH  D   G SHF ++ ++ ++I+    +++ G   
Sbjct: 260 VNDSADAVCELSERLFDAGVMPYYLHVLDKVEGASHFYVSDDKARQIMQEAIKRLPGFLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P  + ++    GK  ID H
Sbjct: 320 PKLVREIGAQPGKTPIDLH 338


>gi|50122897|ref|YP_052064.1| hypothetical protein ECA3977 [Pectobacterium atrosepticum SCRI1043]
 gi|49613423|emb|CAG76874.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 347

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 99/318 (31%), Positives = 163/318 (51%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +    ++ +  +    +++ +    A  +   NP+DP+  Q +  + E
Sbjct: 23  ITDPDELLQLLALNDHAKLRQGNDARRLFALRVPRAFAARMQKGNPDDPLLLQVLTARAE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FIVTPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  ++  L +I H++ LR HSR+P+
Sbjct: 140 NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L   L  +   V +  H NHP E   +   +++RL  +G+ LL+QSVLL+G
Sbjct: 200 VIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRSGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  E LA L     +  I PYYLH  D   G +HF +   E + +V +L +K+SG   
Sbjct: 260 VNDSAETLARLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARVLVKALMKKVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PRLAREIGGEASKTPLDL 337


>gi|146279243|ref|YP_001169401.1| hypothetical protein Rsph17025_3212 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557484|gb|ABP72096.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17025]
          Length = 340

 Score =  402 bits (1034), Expect = e-110,   Method: Composition-based stats.
 Identities = 150/342 (43%), Positives = 215/342 (62%), Gaps = 8/342 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + L S  DL    L+   + + + E++  + I +T    + +     +  +ARQF+P  +
Sbjct: 3   RALDSLDDLATLGLVDPAE-ERLAEVARAFRIRVT----SQMAAAAADPAVARQFVPTVD 57

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL I PEE  DPIGD   SP+ G+ HRY DR++L +   C VYCRFCFRRE+VGS+   +
Sbjct: 58  ELEIRPEELADPIGDEARSPVPGLTHRYTDRVILHVTRTCDVYCRFCFRREVVGSEG--L 115

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS  D  AAL YI+    + EVI TGGDPL LS +RL+ +++ L  I H+  +R HSRVP
Sbjct: 116 LSDADLTAALDYIEATPAVREVILTGGDPLTLSPRRLRGIIERLGQIAHLDQVRIHSRVP 175

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V PQR++ ++I+ L     PV+I +H NH  E   +A AA+ RLA+ G+ LLSQSVLL+
Sbjct: 176 VVAPQRVDEDMIRALL-GPVPVWIVVHVNHAAELRLDARAALGRLADRGVPLLSQSVLLR 234

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND  + L  L R  + LR+KPYYLHH DLA G  HFR +I +G+ I+A L+ +I+G+ 
Sbjct: 235 GVNDSADTLEALFRALLRLRVKPYYLHHCDLARGAGHFRTSIAQGRAIMAELRRRITGIG 294

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            P Y+LD+PGG+GKV +   ++   G G + + D    VH Y
Sbjct: 295 LPTYVLDIPGGFGKVPVTPDHVIPDGPGRWQVRDPQGGVHRY 336


>gi|308189049|ref|YP_003933180.1| hypothetical protein Pvag_3613 [Pantoea vagans C9-1]
 gi|308059559|gb|ADO11731.1| Uncharacterized kamA family protein [Pantoea vagans C9-1]
          Length = 342

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +  ++ E  +    +++ +       +   + +DP+  Q + +++E
Sbjct: 23  VTEPDELLRILALDQHTELAEGADARRLFALRVPHAFIRRMKKGDAHDPLLLQVLTRRQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ + + + + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FIDAPGYSTDPLDEQS-NVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNPG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + +  +AAL YI +  ++ E+IF+GGDPL+     L  ++  L  I H++ LR HSR+P+
Sbjct: 140 NKRSWQAALDYIADHPELDEIIFSGGDPLMAKDHELAWLIAALEKIPHLKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  +L Q L E    V +  H NH  E  +E   A+S L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITDQLCQMLSETRLQVLMVTHINHAQEIDDELREAMSSLKRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND+ + LA L     +  I PYYLH  D   G +HF ++ EE +++V +L  ++SG   
Sbjct: 260 INDNSQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEARQLVRALLSQVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|271502194|ref|YP_003335220.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
           Ech586]
 gi|270345749|gb|ACZ78514.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
           Ech586]
          Length = 345

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 103/317 (32%), Positives = 163/317 (51%), Gaps = 4/317 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + K  Q+   +E  + + + +    A  + P +  DP+  Q +  K+E
Sbjct: 23  ITDPDELLRLLALDKHPQLTAGREARSLFPLRVPRAFAARMRPGDARDPLLLQVLTAKDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P   +DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FITAPGFSQDPLDEQQ-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  Q+ E+IF+GGDPL+     L  +L  L  I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPQLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL Q L ++   V +  H NH  E + E   +++RL  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITAELCQRLAQSPLQVVLVTHINHANEINAELTDSMARLRRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND  + L  L     +  I PYYLH  D   G +HF +  +E + +V  L  ++SG   
Sbjct: 260 INDRVDTLVALSNALFDAGILPYYLHVLDKVQGAAHFLVPDDEARTLVRGLMTQVSGYLV 319

Query: 307 PFYILDLPGGYGKVKID 323
           P    ++ G   K  +D
Sbjct: 320 PNLTREIGGEASKTLLD 336


>gi|162146333|ref|YP_001600792.1| L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus PAl 5]
 gi|209543664|ref|YP_002275893.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161784908|emb|CAP54451.1| putative L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209531341|gb|ACI51278.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 382

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 149/344 (43%), Positives = 203/344 (59%), Gaps = 8/344 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +T+     L  A L+    +  ++E++  Y+ A+ P  A LI    P+DPI  Q +P   
Sbjct: 26  RTVRDVAGLVAAGLVSPGAVPALEEVARQYATAIPPAFAGLITR--PDDPIGLQVVPDAS 83

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL I P ER DPIGD+  SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG   G V
Sbjct: 84  ELTIAPHERMDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGPDGG-V 142

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L     E AL +++    I EVI TGGDPL+LS +RL  +++ L  + HV  +R HSRVP
Sbjct: 143 LDDAALERALDWLRTHPAIREVILTGGDPLMLSPRRLGAIVRALGDMPHVTTIRIHSRVP 202

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP RI   L   + E  + +++ +HANH  EF+  A AA+ R+    I +L QSVLL+
Sbjct: 203 VADPGRITDALADAM-ETDRAMWVVVHANHAREFTPAARAALRRIQARAIPVLGQSVLLR 261

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND    L  L R  VE R+KPYYLH  D A GT+ F + I EG++++A L+ +++GL 
Sbjct: 262 GVNDSVAALEALFRAMVEARMKPYYLHQLDAAPGTARFHVPIAEGRRLLAGLRGRVTGLA 321

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGN----GSYCITDHHNIVH 345
            P Y LD+PGGYGKV +    ++  G         + D     H
Sbjct: 322 WPTYTLDIPGGYGKVPLGPDYLEPEGPAPDGTGLSVRDPAGGRH 365


>gi|58038709|ref|YP_190673.1| lysine 2,3-aminomutase [Gluconobacter oxydans 621H]
 gi|58001123|gb|AAW60017.1| Lysine 2,3-aminomutase [Gluconobacter oxydans 621H]
          Length = 356

 Score =  402 bits (1033), Expect = e-110,   Method: Composition-based stats.
 Identities = 146/336 (43%), Positives = 212/336 (63%), Gaps = 4/336 (1%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           +  TL +  DL +A L  +     ++ +   +++A+ P   +LI   +P+DPIARQ IP 
Sbjct: 18  KRHTLRTPSDLIDAGLATEADRATLEAVGERFTMAIPPAFRDLI--THPDDPIARQVIPD 75

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
             EL  LP E  DPIGD+  SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG   G
Sbjct: 76  ARELVTLPHEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGP-GG 134

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
            +LS+   E AL ++++   I E+I TGGDPL+L+ +RL+ ++++L  I H++ +R HSR
Sbjct: 135 GLLSNAQLETALDWVRQHPDIREIILTGGDPLMLAPRRLKHIVQSLSGIPHIETIRIHSR 194

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+ DP R+  EL+  + E  + +++ IHANH  E +  A  AI  + +  I +LSQSVL
Sbjct: 195 VPVADPARMTEELLDAM-ETDRAMWLVIHANHASELTPHATKAIRAVLSRAIPVLSQSVL 253

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+ND  E L  L+R  ++ R+KPYYLHH D AAGT HF + + +GQ ++  L+ +++G
Sbjct: 254 LRGVNDTVESLEALLRALIKARVKPYYLHHLDAAAGTGHFHVPVAQGQALLRQLRGRVTG 313

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
           L  P Y+LD+P G GKV I    +     G+    D
Sbjct: 314 LAWPTYVLDIPSGRGKVPIGPEYLDPASPGTVSTPD 349


>gi|328472254|gb|EGF43124.1| lysine 2,3-aminomutase [Vibrio parahaemolyticus 10329]
          Length = 340

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 98/324 (30%), Positives = 162/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +       ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  +E  +      DP+ +   + + G++H+Y +R+L+ +   C V CR+CFRR     +
Sbjct: 78  PLSDEFEVHAGYSNDPLDEQ-DNAIPGLLHKYKNRVLMIVKGGCAVNCRYCFRRHFPYQE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
             +    +     + Y+ EK ++ EVIF+GGDPL+     +  +L+ +  I H++ LR H
Sbjct: 137 NKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIAQIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL Q LK +   + +  H NH  E ++E   A+ +L  A + LL+Q 
Sbjct: 195 SRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKLKEANVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  + L  L     +  I PYYLH  D   G +HF +  E  ++++A L E +
Sbjct: 255 VLLKGVNDSVDALIQLSEALFDAGIMPYYLHVLDKVQGAAHFMVDDERARQLMAGLLENV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLIPTLTREIGGRKSKTPLDLH 338


>gi|91228408|ref|ZP_01262334.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01]
 gi|254230273|ref|ZP_04923663.1| lysine 2;3-aminomutase [Vibrio sp. Ex25]
 gi|262393005|ref|YP_003284859.1| lysine 2,3-aminomutase [Vibrio sp. Ex25]
 gi|269966836|ref|ZP_06180909.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91188049|gb|EAS74355.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01]
 gi|151937210|gb|EDN56078.1| lysine 2;3-aminomutase [Vibrio sp. Ex25]
 gi|262336599|gb|ACY50394.1| lysine 2,3-aminomutase [Vibrio sp. Ex25]
 gi|269828503|gb|EEZ82764.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 340

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +       ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  +E  + P    DP+ +   + + G++H+Y +R L+ +   C V CR+CFRR     +
Sbjct: 78  PLSDEFEVHPGYSNDPL-EEQDNEVPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
             +    +     L Y+ ++ ++ EVIF+GGDPL+     +  +L+ + +I H++ LR H
Sbjct: 137 NKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAHIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P R+  EL Q L+ +   + +  H NH  E ++E    + +L  AG+ LL+Q 
Sbjct: 195 SRLPVVIPARVTDELCQLLQASRLQIILVTHINHANEINDEFAEQMFKLKRAGVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  E    L     +  I PYYLH  D   G +H+ ++ EE + I+  L  ++
Sbjct: 255 VLLKGVNDSVEAQVALSEALFDAGILPYYLHVLDKVQGAAHYFISDEEAKAIMRGLITRV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|238796052|ref|ZP_04639563.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC
           43969]
 gi|238719997|gb|EEQ11802.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC
           43969]
          Length = 335

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 164/324 (50%), Gaps = 4/324 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +   + +       + + +       + P +P+DP+  Q +  +EE
Sbjct: 15  ITDPDELLRILFLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGDPSDPLLLQVLTAREE 74

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 75  FIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  +L  L  I H++ LR H+R+P+
Sbjct: 132 NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWLLDELESISHIKRLRIHTRLPV 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L ++   V +  H NH  E  +    ++++L  AG+ LL+QSVLL+G
Sbjct: 192 VIPARITAALCQRLGDSRLQVLMVTHINHTNEIDQSLRDSMAQLKQAGVTLLNQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD ++LA L     +  I PYY+H  D   G +HF +  +E ++++  L  ++SG   
Sbjct: 252 VNDDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311

Query: 307 PFYILDLPGGYGKVKIDTHNIKKV 330
           P    ++ G   K  +D   ++  
Sbjct: 312 PRLAREIGGQPSKTPLDLRLMQSE 335


>gi|221369244|ref|YP_002520340.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131]
 gi|221162296|gb|ACM03267.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131]
          Length = 345

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 158/343 (46%), Positives = 219/343 (63%), Gaps = 10/343 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
           + L S +DL +A L    + + ++E++  + I LTP +         +DP +ARQF+P  
Sbjct: 8   RALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 61

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           +EL I PEE  DPIGD   SP+ G+ HRYPDR++L +   C VYCRFCFRRE+VGS+   
Sbjct: 62  DELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 119

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
           +L   D  AAL YI     + EVI TGGDPL LS +RL+ ++  L  I H+  +R HSRV
Sbjct: 120 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 179

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V P RI+  +++ L     PV+I +H NHP E   +A AA+ RLA+ GI LLSQSVLL
Sbjct: 180 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 238

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           +G+ND  E L +L R  + LR+KPYYLHH DLA G  HFR TI+EG+ ++A L+ +I+G+
Sbjct: 239 RGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRITGI 298

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             P Y+LDLPGG+GKV +   ++   G G + + D    +H Y
Sbjct: 299 GLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPY 341


>gi|149922522|ref|ZP_01910953.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
 gi|149816630|gb|EDM76124.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
          Length = 316

 Score =  401 bits (1032), Expect = e-110,   Method: Composition-based stats.
 Identities = 136/311 (43%), Positives = 190/311 (61%), Gaps = 3/311 (0%)

Query: 39  LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98
           +     + I+  +P+DPI RQ +P   EL  LP ER DPIGD  HSP+  + HRYP R L
Sbjct: 1   MPQSYLDKIDWQDPDDPIRRQAVPSPLELESLPGERPDPIGDAAHSPVPRLTHRYPTRAL 60

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L   +VC +YCR CFR+E +  +     S    E ALAY+ E +++ EVI TGGDPL LS
Sbjct: 61  LYPTYVCSMYCRHCFRKESINDEAAG-FSMAALEPALAYLAEHTELREVILTGGDPLTLS 119

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPY 217
             +L+ +   L  I+H+ +LR H+RVP+  P R+ P L+  L+ +  + V +  H NHP 
Sbjct: 120 DVQLEALRSRLDAIEHLSLLRVHTRVPVTLPTRVTPGLVAALRGDGSRMVCVVTHFNHPR 179

Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDL 276
           E  ++A+ A  RL  AG +LL+QSVLL+G+ND+ E+LA L    V     KPYYLHH DL
Sbjct: 180 ELDDDALTACRRLREAGFMLLNQSVLLRGVNDEVEVLAELFEKLVYRAGAKPYYLHHCDL 239

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
             G SHFR +I+ G++++A+L+ +ISGLC P Y+LDLPGG GKV I    +       +C
Sbjct: 240 TRGVSHFRTSIDRGRELMAALRGRISGLCLPEYVLDLPGGDGKVPIGPSFVHARDGQRWC 299

Query: 337 ITDHHNIVHDY 347
            +     +H Y
Sbjct: 300 FSTWAGGLHHY 310


>gi|261342808|ref|ZP_05970666.1| KamA family protein [Enterobacter cancerogenus ATCC 35316]
 gi|288314849|gb|EFC53787.1| KamA family protein [Enterobacter cancerogenus ATCC 35316]
          Length = 342

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 101/297 (34%), Positives = 160/297 (53%), Gaps = 3/297 (1%)

Query: 29  KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
           +E    +++ +       +   NP+DP+ +Q +  ++E    P    DP+ +  +S + G
Sbjct: 45  REAKRLFALRVPRAFVARMEKGNPDDPLLKQTLTSQDEFVTAPGYSTDPL-EEQNSVVPG 103

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           ++H+Y +R LL +   C V CR+CFRR    +      + ++ + AL YI    ++ E+I
Sbjct: 104 LLHKYLNRALLLVKGGCAVNCRYCFRRHFPYADNQG--NKRNWQVALDYIAAHPELDEII 161

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           F+GGDPL+     L  +L  L  I H++ LR HSR+PIV P RI   L+  L ++   V 
Sbjct: 162 FSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDGLVSRLAQSRLQVL 221

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           +  H NH  E  +E  AA+ RL  AG+ LL+QSVLL+G+ND+  +LA+L     +  + P
Sbjct: 222 LVNHINHANEIDDEFRAAMIRLRQAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMP 281

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           YYLH  D   G +HF +T EE ++IV  L   +SG   P    ++ G   K  +D  
Sbjct: 282 YYLHVLDRVQGAAHFMVTDEEARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLDLQ 338


>gi|269137690|ref|YP_003294390.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202]
 gi|267983351|gb|ACY83180.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202]
 gi|304557746|gb|ADM40410.1| hypothetical protein ETAF_0286 [Edwardsiella tarda FL6-60]
          Length = 342

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 100/315 (31%), Positives = 159/315 (50%), Gaps = 3/315 (0%)

Query: 11  AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
           A  L    L    Q     E    + + +     + I   +PNDP+ RQ +    E    
Sbjct: 27  ADLLAQLGLSDHPQWLAGCEARRLFPLRVPRAFISRIRRGDPNDPLLRQVMSDAAEFIET 86

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
           P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR     +     +  +
Sbjct: 87  PGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYQENQG--TRAN 143

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
            + A+AY+ E  ++ E+IF+GGDPL+     L  +   L  + H++ LR HSR+P+V P 
Sbjct: 144 WQRAVAYLHEHPELDEIIFSGGDPLMAKDHELDWLFTQLEQLPHLRRLRIHSRLPVVIPA 203

Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           R+   L Q + ++   + +  H NH  E  E    A+ RL  AG+ LL+QSVLL+G+ND 
Sbjct: 204 RVTDALCQRMADSRLQMVLVTHINHANEIDEALSEAMGRLKQAGVTLLNQSVLLRGVNDS 263

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
            + LA L     +  I PYYLH  D   G +HF +  +E ++++  L  ++SG   P   
Sbjct: 264 ADTLAALSNALFDAGILPYYLHVLDKVQGGAHFMVPDDEARRLMHGLLAQVSGYLVPRLT 323

Query: 311 LDLPGGYGKVKIDTH 325
            ++ G   K ++D H
Sbjct: 324 REIGGEPSKTQLDLH 338


>gi|304396296|ref|ZP_07378177.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB]
 gi|304355805|gb|EFM20171.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB]
          Length = 327

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 101/326 (30%), Positives = 168/326 (51%), Gaps = 4/326 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
           MQ     +T   +L     + +  ++ E  +    +++ +       +   + +DP+  Q
Sbjct: 1   MQQLADVVTEPDELLRILALDQHTELAEGADARRLFALRVPHAFIRRMKKGDAHDPLLLQ 60

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            + +++E    P    DP+ + + + + G++H+Y +R LL +   C V CR+CFRR    
Sbjct: 61  VLTRRQEFIDAPGYSTDPLDEQS-NVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 119

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                  + +  +AAL YI E  ++ E+IF+GGDPL+     L  ++  L  I H++ LR
Sbjct: 120 QDNPG--NKRSWQAALDYIAEHPELDEIIFSGGDPLMAKDHELAWLIAALEQIPHLKRLR 177

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+P+V P RI  +L Q L +    V +  H NH  E  E    ++ RL  AG+ LL+
Sbjct: 178 IHSRLPVVIPARITEQLCQMLSDTRLQVIMVTHINHAQEIDEALRESMIRLKRAGVTLLN 237

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+GIND+ + LA L     +  I PYYLH  D   G +HF ++ +E +++V SL  
Sbjct: 238 QSVLLRGINDNAQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDDEARQLVRSLLS 297

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325
           ++SG   P    ++ G   K  +D  
Sbjct: 298 QVSGYLVPKLAREIGGEPSKTPLDLQ 323


>gi|189425162|ref|YP_001952339.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ]
 gi|189421421|gb|ACD95819.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ]
          Length = 341

 Score =  401 bits (1031), Expect = e-110,   Method: Composition-based stats.
 Identities = 122/320 (38%), Positives = 187/320 (58%), Gaps = 8/320 (2%)

Query: 28  IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87
           +K +++ Y   ++   A LI    P+DPI +Q +P   EL    +   DP+ +   SP+ 
Sbjct: 22  LKPVADLYPYRISSYYAGLI--TAPHDPIWQQCVPSLLELVDTEQHP-DPLDEERLSPVP 78

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           G++HRYPDR +L + + C  YCRFC R+  VG   G         AAL YI    Q+ ++
Sbjct: 79  GLIHRYPDRAVLLVSNRCATYCRFCMRKRRVGCAGGQPA----LSAALEYIAATPQLRDI 134

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           I +GGDPL+LS   L ++L  LR I HV+++R  SR+P+  P RI P   + L E   P+
Sbjct: 135 ILSGGDPLMLSDDELHEILLALRRIPHVEVIRIGSRMPVTAPARITPAFCRMLAEH-HPL 193

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           Y+  H NHP E + EA  A   LA+ G+ L +Q+VLLKG+NDD   +  L+   + L+++
Sbjct: 194 YLNTHFNHPQELTSEAAQACRLLASVGVPLGNQTVLLKGVNDDSPTMQALLTGLLRLQVR 253

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
           PYYLH  DL  GT+HFR  +E G++++ +L+ KISG+  P +++DLPGG GKV +   ++
Sbjct: 254 PYYLHQMDLVRGTAHFRTPLEHGRQLIGALRGKISGMAIPHFVIDLPGGKGKVPVLPDSL 313

Query: 328 KKVGNGSYCITDHHNIVHDY 347
            +VG   + +        +Y
Sbjct: 314 TRVGEAVWQVQTSSGETINY 333


>gi|332560846|ref|ZP_08415164.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N]
 gi|332274644|gb|EGJ19960.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N]
          Length = 340

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 158/343 (46%), Positives = 219/343 (63%), Gaps = 10/343 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
           + L S +DL +A L    + + ++E++  + I LTP +         +DP +ARQF+P  
Sbjct: 3   RALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           +EL I PEE  DPIGD   SP+ G+ HRYPDR++L +   C VYCRFCFRRE+VGS+   
Sbjct: 57  DELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
           +L   D  AAL YI     + EVI TGGDPL LS +RL+ ++  L  I H+  +R HSRV
Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V P RI+  +++ L     PV+I +H NHP E   +A AA+ RLA+ GI LLSQSVLL
Sbjct: 175 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           +G+ND  E L +L R  + LR+KPYYLHH DLA G  HFR TI+EG+ ++A L+ +I+G+
Sbjct: 234 RGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRITGI 293

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             P Y+LDLPGG+GKV +   ++   G G + + D    +H Y
Sbjct: 294 GLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPY 336


>gi|327396208|dbj|BAK13630.1| lysine 2 3-aminomutase YjeK [Pantoea ananatis AJ13355]
          Length = 342

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +     +    +    +++ +       +   +  DP+  Q +  ++E
Sbjct: 23  VTDPHELLQLLALDHHPDLAAGGDARRLFALRVPRAFIRRMKKGDAQDPLLLQVLTSRQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ + N S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ +AAL YI    ++ E+IF+GGDPL+     L  ++  L  I H++ LR HSR+P+
Sbjct: 140 NKRNWQAALDYIAAHPELDEIIFSGGDPLMAKDHELAWLIDALGAIPHLKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L E    V +  H NH  E  E    A+ RL  A + LL+QSVLL+G
Sbjct: 200 VIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLRLKRADVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD + LA L     +  I PYYLH  D   G +HF ++ EE + ++ SL  ++SG   
Sbjct: 260 VNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEARALMRSLLPRVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|300723094|ref|YP_003712392.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061]
 gi|297629609|emb|CBJ90212.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061]
          Length = 392

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 124/356 (34%), Positives = 197/356 (55%), Gaps = 12/356 (3%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QLR+  + +++DL     +   +   I+ +   Y    TP  A+L++ ++ N PI  Q I
Sbjct: 19  QLRN-LIKTSEDLEKWIALTDNEKKAIEAVKGKYLWQSTPYYASLMDKYDANCPIRLQTI 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E+ I      DP+GD ++     ++H+YP+RI+L +   CPVYCR C R+      
Sbjct: 78  PHLREMKIETNSDNDPVGDTSNLKTARVIHKYPNRIVLLVSDTCPVYCRHCTRKFHTTDV 137

Query: 122 KGTVLSSK---DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           +GT   S      E   AYI+   +I +V+ TGGDPLI   K L+ ++K LR IKH+ I+
Sbjct: 138 EGTYFGSDLAASYEEDFAYIESHPEIDDVLLTGGDPLIHYDKFLEVIIKRLRSIKHINII 197

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  SR P+  PQRI  +  Q L++   P+++  H NHP E +EEA  A  RL   GI + 
Sbjct: 198 RIGSRYPVFAPQRITEKFCQMLEKY-HPIWVNTHFNHPKEVTEEAATACDRLLRHGIPVQ 256

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +QSVLLKGINDD E + +L++  + +R++PYYL+H D  +G SHF  T+E+G++I+ ++ 
Sbjct: 257 NQSVLLKGINDDVETMRSLLKALLRIRVRPYYLYHCDNVSGVSHFMTTLEKGKEIMDAMV 316

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI---VHDY--PP 349
              +G   P Y++      GK+ ++   +    +G     ++      V +Y  PP
Sbjct: 317 GFETGFSVPQYVVTT--TLGKLAVNREYVITQEDGRIIGRNYKKESLDVTEYIKPP 370


>gi|123440740|ref|YP_001004732.1| hypothetical protein YE0356 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122087701|emb|CAL10486.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 345

 Score =  401 bits (1030), Expect = e-109,   Method: Composition-based stats.
 Identities = 96/318 (30%), Positives = 162/318 (50%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +   + +       + + +       + P NP+DP+  Q +  +EE
Sbjct: 23  ITDPDELLRILQLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQVLTAREE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL Y+++  ++ E+IF+GGDPL+     L  +L  +  I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWLLDEIENISHIKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL Q L ++   V +  H NH  E       ++++L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITAELCQRLSDSRLQVLMVTHINHANEIDASFRDSMAQLKRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD E+LA L     +  I PYY+H  D   G +HF +  +E ++++  L  ++SG   
Sbjct: 260 VNDDDEVLAALSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PRLAREIGGQPSKTPLDL 337


>gi|225847898|ref|YP_002728061.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225643772|gb|ACN98822.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 374

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 117/346 (33%), Positives = 193/346 (55%), Gaps = 8/346 (2%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ L + +D+     +     D  K++S  Y    TP    L +  N  DPI +Q 
Sbjct: 28  WQIKNR-LKTLEDIKKI--LPNVNEDVFKKVSQIYHFGTTPYYIFLADRTNLEDPILKQI 84

Query: 61  IPQKEELNILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           +P ++E++   +E    DP  ++  SP+ G+ HRYPDR+L +  + C VYCR C R+ M 
Sbjct: 85  LPDEKEIDEKYQEGAFLDPFLEDEKSPVLGLTHRYPDRVLFRATNFCSVYCRHCMRKRMF 144

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +     + ++ +    YI+    I EV+ +GGDPL L +++++ ++K L  I HV I+
Sbjct: 145 -LEDERARTKQEYDVMFEYIKSNKAIKEVLVSGGDPLTLPNQKIEYIIKNLYEIDHVDII 203

Query: 179 RFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           R  SR  + +P R  + EL++  ++  K V+I  H NHP E + E   A+  + + G  +
Sbjct: 204 RIGSRELVSNPFRFYDEELLEIFEKYDK-VWIVTHFNHPNEITSETKKAVKNILSTGTPV 262

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
           L+Q+VLLKGINDD   + NLMR+ ++++IKPYYL H D   G  HF+  IE+G +I+  L
Sbjct: 263 LNQTVLLKGINDDKYTMENLMRSLLKVKIKPYYLFHCDPTKGVYHFKTGIEKGLEIMEHL 322

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
           + ++SGL  P + +DL  G GKV +    +    NG Y   ++   
Sbjct: 323 RGRVSGLGNPTFAVDLVNGLGKVPLLPEYLISKKNGFYEFKNYQGK 368


>gi|251788023|ref|YP_003002744.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591]
 gi|247536644|gb|ACT05265.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591]
          Length = 345

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/317 (31%), Positives = 160/317 (50%), Gaps = 4/317 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +    Q+   +E    + + +    A  + P +  DP+  Q +  ++E
Sbjct: 23  ITDPDELLRLLALDNHPQLTAGREARRLFPLRVPRAFAARMRPGDARDPLLLQVLTAQDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FIATPGFSHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  Q+ E+IF+GGDPL+     L  +L  L  I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYIRQHPQLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL + L ++   V +  H NH  E   E    ++RL  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITAELCRRLAQSPLRVVLVTHINHANEIDTELADGMARLRQAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+   LA L     +  I PYYLH  D   G +HF +  ++ + +V  L  ++SG   
Sbjct: 260 VNDNANTLAALSNALFDAGILPYYLHVLDKVQGAAHFLVPDDDARTLVRELMMQVSGYLV 319

Query: 307 PFYILDLPGGYGKVKID 323
           P    ++ G   K  +D
Sbjct: 320 PSLAREIGGEASKTLLD 336


>gi|238784793|ref|ZP_04628795.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC
           43970]
 gi|238714306|gb|EEQ06316.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC
           43970]
          Length = 335

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +   + +       + + +       + P +P DP+  Q +  +EE
Sbjct: 15  ITDPDELLRILFLNEHPNLQQGSAARRLFPLRVPRAFVARMQPGDPFDPLLLQVLTAREE 74

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 75  FIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  +L  L  I H++ LR H+R+P+
Sbjct: 132 NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWLLDELESISHIKRLRIHTRLPV 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L ++   V +  H NH  E  +    ++++L  AG+ LL+QSVLL+G
Sbjct: 192 VIPARITAALCQRLSDSRLQVLMVTHINHANEIDQPLRDSMAQLKQAGVTLLNQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +N+D E+L  L     +  I PYY+H  D   G +HF +  +E ++++  L  ++SG   
Sbjct: 252 VNNDAEVLTTLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311

Query: 307 PFYILDLPGGYGKVKIDTHNIKKV 330
           P    ++ G   K  +D   ++  
Sbjct: 312 PRLAREIGGQPSKTPLDLRLMQSE 335


>gi|153838020|ref|ZP_01990687.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810]
 gi|149748628|gb|EDM59487.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810]
          Length = 340

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 97/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +       ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  +E  +      DP+ +   + + G++H+Y +R+L+ +   C V CR+CFRR     +
Sbjct: 78  PLSDEFEVHAGYSNDPLDEQ-DNAIPGLLHKYKNRVLMIVKGGCAVNCRYCFRRHFPYQE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
             +    +     + Y+ EK ++ EVIF+GGDPL+     +  +L+ +  I H++ LR H
Sbjct: 137 NKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIAKIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL Q LK +   + +  H NH  E ++E   A+ +L  A + LL+Q 
Sbjct: 195 SRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKLKEANVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  + L+ L     +  I PYYLH  D   G +HF +  E  ++++  L E +
Sbjct: 255 VLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERARQLMVGLLENV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLIPTLTREIGGRKSKTPLDLH 338


>gi|46203355|ref|ZP_00051632.2| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum
           MS-1]
          Length = 312

 Score =  400 bits (1029), Expect = e-109,   Method: Composition-based stats.
 Identities = 163/309 (52%), Positives = 213/309 (68%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            L S   L  A LI    +  ++ ++  Y++++T  +A LI P  P+DPIARQF+P+ EE
Sbjct: 4   ALKSTAALARAGLIDAAVLPVLERVAARYAVSVTADMAELIEPGRPDDPIARQFVPRAEE 63

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   P ER DPIGD+ H P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG +    L
Sbjct: 64  LETNPRERADPIGDDVHEPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPEGQGSL 123

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +   A  YI +  +IWEV+ TGGDP  LS +RL  + + L  I HV++LRFH+RVP+
Sbjct: 124 SEAELAVAYRYIADHPEIWEVVVTGGDPFALSPRRLAGIAEALAAIPHVRVLRFHTRVPM 183

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V+P RI+  L+  LK     V++A+HANHP EF+  A AAI+RL +AGI ++SQSVLL+G
Sbjct: 184 VEPARIDERLVAALKRFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD + L  LMR FVE RIKPYYLH  DLA GT H R T+ EGQ ++  L+ ++SGL Q
Sbjct: 244 VNDDADTLEALMRGFVENRIKPYYLHQGDLAPGTGHLRTTLPEGQALMRRLRGRLSGLAQ 303

Query: 307 PFYILDLPG 315
           P Y+LD+P 
Sbjct: 304 PLYVLDIPA 312


>gi|229527414|ref|ZP_04416806.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)]
 gi|229335046|gb|EEO00531.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)]
          Length = 340

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/324 (30%), Positives = 164/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVI +GGDPL+     L  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVEMFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|238918348|ref|YP_002931862.1| hypothetical protein NT01EI_0386 [Edwardsiella ictaluri 93-146]
 gi|238867916|gb|ACR67627.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 342

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 3/315 (0%)

Query: 11  AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
           A  L    L    Q     E    + + +     + I   +PNDP+ RQ +    E    
Sbjct: 27  ADLLAQLGLSDHPQWLAGCEARRLFPLRVPHAFISRIRRGDPNDPLLRQVMSDAAEFIET 86

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
           P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR     +     +  +
Sbjct: 87  PGFSTDPLAEQ-HSVVPGLLHKYQNRALLLVKGSCAVNCRYCFRRHFPYQENQG--TRAN 143

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
            + A+AY+ E  ++ E+IF+GGDPL+     L  +   L  + H++ LR HSR+P+V P 
Sbjct: 144 WQRAVAYLCEHPELDEIIFSGGDPLMAKDHELDWLFTQLEQLPHLRRLRIHSRLPVVIPA 203

Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           R+   L Q + ++   + +  H NH  E  E    A+ RL  AG+ LL+QSVLL+GIND+
Sbjct: 204 RVTDALCQRMADSRLQMILVTHINHANEIDEALSEAMERLKQAGVTLLNQSVLLRGINDN 263

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
            + LA L     E  I PYYLH  D   G +HF +  +E ++++  L  ++SG   P   
Sbjct: 264 ADTLAALSNALFEAGILPYYLHVLDKVQGGAHFMVPDDEARRLMNGLLSRVSGYLVPRLT 323

Query: 311 LDLPGGYGKVKIDTH 325
            ++ G   K  +D H
Sbjct: 324 REIGGEPSKTPLDLH 338


>gi|323138167|ref|ZP_08073240.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC
           49242]
 gi|322396629|gb|EFX99157.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC
           49242]
          Length = 363

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 170/326 (52%), Positives = 223/326 (68%), Gaps = 2/326 (0%)

Query: 22  KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81
             +   ++ + + YS+A+TP +A LI+  +P DPIARQF+P   EL  LP+E  DPIGD+
Sbjct: 36  PGRAQALRGVESQYSVAVTPDMAALIDAADPADPIARQFLPDARELVTLPQELADPIGDD 95

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
            HSP  G+VHRYPDR+LLKLL VCPVYCRFCFRRE VG  KG VLS + T+AAL YI   
Sbjct: 96  AHSPAPGLVHRYPDRVLLKLLTVCPVYCRFCFRRETVGRGKGDVLSPEATDAALDYIAGH 155

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
            QI+EVI TGGDPL+LS +RL  V + L  I HV +LR H+R P   P  +  E +  L+
Sbjct: 156 RQIFEVILTGGDPLLLSGRRLSAVARRLAKIPHVAVLRVHTRAPTAAPDLVTQERLDALR 215

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           E+GK +Y+A+H NH  E +  A AAI+RL  AG  LLSQ+VLLKG+NDD + L  LMR  
Sbjct: 216 ESGKALYVALHVNHSRELTPAARAAIARLHEAGATLLSQTVLLKGVNDDADTLERLMRDL 275

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
           V LR+KPYYLHHPDLA GTSHFRL+++ G ++ + L  +++G+  P Y+LD+PGG+GK  
Sbjct: 276 VALRVKPYYLHHPDLAPGTSHFRLSLDAGLRVHSELTRRVTGVAVPRYVLDIPGGFGKAP 335

Query: 322 IDTHNIKKVGNGSYCITDHHNIVHDY 347
           +   + +  G G + I D    VH Y
Sbjct: 336 VS--DAETDGEGGWRIADRSGRVHLY 359


>gi|294634433|ref|ZP_06712969.1| KamA family protein [Edwardsiella tarda ATCC 23685]
 gi|291092143|gb|EFE24704.1| KamA family protein [Edwardsiella tarda ATCC 23685]
          Length = 342

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/315 (31%), Positives = 160/315 (50%), Gaps = 3/315 (0%)

Query: 11  AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
           A  L   +L    +     E    + + +       + P +P DP+ RQ +    E    
Sbjct: 27  ADLLAQLSLADHPEWRAGCEARRLFPLRVPRAFIRRMRPGDPQDPLLRQVMSDAAEFIET 86

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
           P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR     +     +  +
Sbjct: 87  PGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYQENQG--TRAN 143

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
            + AL Y++E  ++ E+IF+GGDPL+     L  +   L  + H++ LR HSR+P+V P 
Sbjct: 144 WQRALEYLREHPELDEIIFSGGDPLMAKDHELDWLFSQLESLPHLKRLRIHSRLPVVIPA 203

Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           R+   L Q + E+   + +  H NH  E  E   AA+ RL  AG+ LL+QSVLL+G+ND+
Sbjct: 204 RVTETLCQRMAESRLQMLLVTHINHANEIDEALSAAMQRLKQAGVTLLNQSVLLRGVNDN 263

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
            + LA L     +  I PYYLH  D   G +HF +  +E + ++  L  ++SG   P   
Sbjct: 264 ADTLAALSNALFDAGILPYYLHVLDRVQGGAHFMVPDDEARVLMHGLLARVSGYLVPRLT 323

Query: 311 LDLPGGYGKVKIDTH 325
            ++ G   K ++D H
Sbjct: 324 REIGGEPSKTQLDLH 338


>gi|153825103|ref|ZP_01977770.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149741249|gb|EDM55291.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 340

 Score =  400 bits (1028), Expect = e-109,   Method: Composition-based stats.
 Identities = 101/324 (31%), Positives = 165/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|291615956|ref|YP_003518698.1| YjeK [Pantoea ananatis LMG 20103]
 gi|291150986|gb|ADD75570.1| YjeK [Pantoea ananatis LMG 20103]
          Length = 342

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +     +    +    +++ +       +   +  DP+  Q +  ++E
Sbjct: 23  VTDPHELLQLLALDHHPDLAAGGDARRLFALRVPRAFIRRMKKGDAQDPLLLQVLTSRQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ + N S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ +AAL YI    ++ E+IF+GGDPL+     L  ++  L  I H++ LR HSR+P+
Sbjct: 140 NKRNWQAALDYITAHPELDEIIFSGGDPLMAKDHELAWLIDALGAIPHLKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L E    V +  H NH  E  E    A+ RL  A + LL+QSVLL+G
Sbjct: 200 VIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLRLKRADVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD + LA L     +  I PYYLH  D   G +HF ++ EE + ++ SL  ++SG   
Sbjct: 260 VNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEARALMRSLLPRVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|197286378|ref|YP_002152250.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
 gi|194683865|emb|CAR45006.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
          Length = 342

 Score =  399 bits (1027), Expect = e-109,   Method: Composition-based stats.
 Identities = 93/320 (29%), Positives = 162/320 (50%), Gaps = 4/320 (1%)

Query: 6   KTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
           + ++   +L     ++   ++    +    + + +       +   +PNDP+  Q +   
Sbjct: 21  QAISDPVELLQLLALEHHAELQRGAQARRLFPLRVPREFVARMKKGDPNDPLLLQVLTAH 80

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            E  + P    DP+ +  ++ + G++H+Y +R LL +   C V CR+CFRR      +  
Sbjct: 81  AEFTLTPGFSTDPLDEQQNA-VPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPY--EDN 137

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
             +  + + A+ YI+   ++ E+IF+GGDPL+     L  ++  L  I H++ LR HSR+
Sbjct: 138 KGNKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQLEAIPHIKRLRIHSRL 197

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V P RI   L Q L+++     + +H NH  E  +    A  +L NA + LL+Q VLL
Sbjct: 198 PVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDDALREACLKLKNAHVTLLNQGVLL 257

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           +G+ND+ + LA+L R   +  I PYYLH  D   G +HF +   E ++I+ SL   +SG 
Sbjct: 258 RGVNDNAQTLADLSRALFDAGIMPYYLHVLDKVQGAAHFMVPDSEAREIMKSLMSLVSGY 317

Query: 305 CQPFYILDLPGGYGKVKIDT 324
             P    ++ G   K  +D 
Sbjct: 318 MVPKLTREIGGEPSKTLLDL 337


>gi|300724424|ref|YP_003713744.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061]
 gi|297630961|emb|CBJ91641.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061]
          Length = 342

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 99/318 (31%), Positives = 161/318 (50%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L +   +     + E       + + +    A  +   +P DP+  Q +  +EE
Sbjct: 23  ITDPDELLHLLSLNTHSILKEGHGAKRLFPLRVPRSFAARMKKGDPRDPLLLQVLTAREE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P+   DP+ +   S + G++H+Y +R LL +   C V CR+CFRR      +    
Sbjct: 83  FAVTPDFSTDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY--EDNKG 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  + + AL YI +  +I E+IF+GGDPL+     L  ++  +  I HV+ LR H+R+P+
Sbjct: 140 NKNNWQLALDYIGQHPEIDEIIFSGGDPLMAKDHELDWLISRIESIPHVKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+RI   L   L ++   V +  H NH  E   E   +++RL  AG+ LL+QSV L+ 
Sbjct: 200 VIPERITLALCNRLAQSHLQVIMVTHINHANEIDNEFRGSMTRLKQAGVTLLNQSVFLRD 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND+ E LA+L     +  I PYY+H  D   G +HF +  EE + I+  L  K+SG   
Sbjct: 260 INDNAETLADLSNVLFDTGILPYYIHVLDKVQGAAHFLVNDEEAKIIMRELLSKVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PRLTREIGGEPSKTPLDL 337


>gi|330862365|emb|CBX72524.1| uncharacterized kamA family protein yjeK [Yersinia enterocolitica
           W22703]
          Length = 328

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/331 (29%), Positives = 166/331 (50%), Gaps = 4/331 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
           MQ     +T   +L     + +   + +       + + +       + P NP+DP+  Q
Sbjct: 1   MQQLADVITDPDELLRILQLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQ 60

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +  +EE    P    DP+ +   S + G++H+Y +R LL +   C + CR+CFRR    
Sbjct: 61  VLTAREEFIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPY 119

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                  +  +   AL Y+ +  ++ E+IF+GGDPL+     L  +L  +  I H++ LR
Sbjct: 120 QDNQG--NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWLLDEIESISHIKRLR 177

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P RI  EL Q L ++   V +  H NH  E       ++++L  AG+ LL+
Sbjct: 178 IHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRDSMAQLKRAGVTLLN 237

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+G+NDD E+LA L  T  +  I PYY+H  D   G +HF +  +E ++++  L  
Sbjct: 238 QSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLS 297

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
           ++SG   P    ++ G   K  +D   ++  
Sbjct: 298 RVSGYLVPRLAREIGGQPSKTPLDLRLMQSE 328


>gi|183179663|ref|ZP_02957874.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|183013074|gb|EDT88374.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 340

 Score =  399 bits (1026), Expect = e-109,   Method: Composition-based stats.
 Identities = 101/324 (31%), Positives = 165/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVKLFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|153213997|ref|ZP_01949190.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124115567|gb|EAY34387.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 340

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVI +GGDPL+     L  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  +    L  T  +  I PYYLH  D   G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|253991228|ref|YP_003042584.1| hypothetical protein PAU_03754 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782678|emb|CAQ85842.1| conserved hypothetical Protein [Photorhabdus asymbiotica]
          Length = 342

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 103/319 (32%), Positives = 166/319 (52%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +  ++ +       + + +    A  +   +PNDP+  Q I   EE
Sbjct: 23  ITDPDELLQLLSLHEHPELTKGSSARRLFPLRVPRAFAARMRASDPNDPLLLQVITAPEE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
            NI+P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR      +    
Sbjct: 83  FNIVPGFSADPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY--EDNKG 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  + + AL YIQ+  ++ E+IF+GGDPL+     L  ++  L  I H++ LR H+R+P+
Sbjct: 140 NKHNWQQALNYIQQHPELDEIIFSGGDPLMAKDHELDWLISNLEQISHIKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L   L ++   V +  H NH  E  +    ++  L +AGI LL+QSVLL+G
Sbjct: 200 VIPARITTTLCNRLAQSRLQVIMVTHINHENEIDQSLRNSMMLLKHAGITLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +N+ P+ILANL     +  I PYY+H  D   G +HF ++ EE + I+  L  K+SG   
Sbjct: 260 VNNHPDILANLSNALFDAGILPYYIHVLDKVQGAAHFMVSDEEARGIIRELLTKVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PRLAREIGGESSKTPLDLE 338


>gi|126464702|ref|YP_001045815.1| lysine 2,3-aminomutase YodO family protein [Rhodobacter sphaeroides
           ATCC 17029]
 gi|126106513|gb|ABN79043.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17029]
          Length = 345

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 155/343 (45%), Positives = 218/343 (63%), Gaps = 10/343 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
           + + S +DL +A L    + + ++E++  + I LTP +         +DP +ARQF+P  
Sbjct: 8   RAVESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 61

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           +EL I PEE  DPIGD   SP+ G+ HRYPDR++L +   C VYCRFCFRRE+VG++   
Sbjct: 62  DELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGNEG-- 119

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
           +L   D  AAL YI     + EVI TGGDPL LS +RL+ ++  L  I H+  +R HSRV
Sbjct: 120 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 179

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V P RI+  +++ L     PV+I +H NHP E   +A AA+ RLA+ GI LLSQSVLL
Sbjct: 180 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 238

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           +G+ND  + L  L R  + LR+KPYYLHH DLA G  HFR TI+EG+ ++A L+ +I+G+
Sbjct: 239 RGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMADLRRRITGI 298

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             P Y+LDLPGG+GKV +   ++   G G + + D    +H Y
Sbjct: 299 GLPSYVLDLPGGFGKVPLTHDHLIADGPGRWQVRDPQGGLHPY 341


>gi|322831134|ref|YP_004211161.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602]
 gi|321166335|gb|ADW72034.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602]
          Length = 342

 Score =  399 bits (1025), Expect = e-109,   Method: Composition-based stats.
 Identities = 95/318 (29%), Positives = 160/318 (50%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +    ++   +E    + + +       + P +P DP+  Q +  +EE
Sbjct: 23  ITDPDELLTLLALNDNAELQSGREARRLFPLRVPRAFVARMQPGDPQDPLLLQVLTAREE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FIAAPGFTTDPLDEQR-SVVPGLLHKYSNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI+ + ++ E+IF+GGDPL+     L  ++  L  I H++ LR H+R+P+
Sbjct: 140 NKANWVQALDYIRTRPELDEIIFSGGDPLMAKDHELDWLIGELEGIAHIKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI     Q L+++   V +  H NH  E +    A++++L   G+ LL+QSVLL+G
Sbjct: 200 VIPARITDVFCQRLEKSRLQVLMVTHINHANEINNALRASMAKLKRHGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  ++LA L     +  I PYY+H  D   G +HF +  +E + I+  L  K+SG   
Sbjct: 260 VNDSADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVNDDEARVIMKGLMSKVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PKLTREIGGEPSKTILDL 337


>gi|229513581|ref|ZP_04403045.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21]
 gi|254285853|ref|ZP_04960815.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|297581499|ref|ZP_06943422.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|150424035|gb|EDN15974.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|229349458|gb|EEO14414.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21]
 gi|297534337|gb|EFH73175.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 340

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPL+     +  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|22124525|ref|NP_667948.1| hypothetical protein y0611 [Yersinia pestis KIM 10]
 gi|45440363|ref|NP_991902.1| hypothetical protein YP_0509 [Yersinia pestis biovar Microtus str.
           91001]
 gi|51594759|ref|YP_068950.1| hypothetical protein YPTB0407 [Yersinia pseudotuberculosis IP
           32953]
 gi|108809919|ref|YP_653835.1| hypothetical protein YPA_3929 [Yersinia pestis Antiqua]
 gi|108813477|ref|YP_649244.1| hypothetical protein YPN_3317 [Yersinia pestis Nepal516]
 gi|145600867|ref|YP_001164943.1| hypothetical protein YPDSF_3620 [Yersinia pestis Pestoides F]
 gi|150260603|ref|ZP_01917331.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125]
 gi|153950672|ref|YP_001402627.1| KamA family iron-sulfur cluster-binding protein [Yersinia
           pseudotuberculosis IP 31758]
 gi|218927556|ref|YP_002345431.1| hypothetical protein YPO0353 [Yersinia pestis CO92]
 gi|229836612|ref|ZP_04456778.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A]
 gi|229840221|ref|ZP_04460380.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229842302|ref|ZP_04462457.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229903959|ref|ZP_04519072.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516]
 gi|21957321|gb|AAM84199.1|AE013663_5 hypothetical protein y0611 [Yersinia pestis KIM 10]
 gi|45435219|gb|AAS60779.1| Lysine 2,3-aminomutase [Yersinia pestis biovar Microtus str. 91001]
 gi|51588041|emb|CAH19647.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108777125|gb|ABG19644.1| L-lysine 2,3-aminomutase [Yersinia pestis Nepal516]
 gi|108781832|gb|ABG15890.1| L-lysine 2,3-aminomutase [Yersinia pestis Antiqua]
 gi|115346167|emb|CAL19035.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|145212563|gb|ABP41970.1| L-lysine 2,3-aminomutase [Yersinia pestis Pestoides F]
 gi|149290011|gb|EDM40088.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125]
 gi|152962167|gb|ABS49628.1| iron-sulfur cluster-binding protein, KamA family [Yersinia
           pseudotuberculosis IP 31758]
 gi|229679729|gb|EEO75832.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516]
 gi|229690612|gb|EEO82666.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
           India 195]
 gi|229696587|gb|EEO86634.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str.
           PEXU2]
 gi|229706296|gb|EEO92304.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A]
 gi|320013781|gb|ADV97352.1| lysine 2,3-aminomutase [Yersinia pestis biovar Medievalis str.
           Harbin 35]
          Length = 342

 Score =  398 bits (1024), Expect = e-109,   Method: Composition-based stats.
 Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +   + +       + + +       + P N +DP+  Q +  +EE
Sbjct: 23  ITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FITAPGFTHDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  +L  L  IKH++ LR H+R+P+
Sbjct: 140 NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L  +   V +  H NH  E       +++RL  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +N+D ++LA L     +  I PYY+H  D   G +HF +  +E ++++  L  ++SG   
Sbjct: 260 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PRLTREVGGEPSKTPLDL 337


>gi|317046674|ref|YP_004114322.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b]
 gi|316948291|gb|ADU67766.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b]
          Length = 342

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 160/319 (50%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +  ++ E  E    +++ +       +   +  DP+  Q +  ++E
Sbjct: 23  VTDPAELLQLLALDRHAELAEGTEARRLFALRVPRAFIQRMKIGDAQDPLLLQVLTSRQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
            N  P    DP+ + + S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 83  FNDAPGYSTDPLDEQS-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ +AA+ YI +  ++ E+IF+GGDPL+     L  +++ L  + H++ LR HSR+P+
Sbjct: 140 NKRNWQAAIDYIADHPELDEIIFSGGDPLMAKDHELAWLIEALEKLPHLKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L      V +  H NH  E  +E    +  L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEGLCQLLANTRLQVLLVSHINHAQEIDDELRYGMQMLKRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + LA+L     +  I PYYLH  D   G +HF +  +E + +V  L   +SG   
Sbjct: 260 VNDKAQQLADLSNALFDAGILPYYLHVLDKVQGAAHFFVPDDEARALVRELLTMVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D  
Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338


>gi|153829470|ref|ZP_01982137.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148875053|gb|EDL73188.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 340

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 99/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPL+     +  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D +
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLY 338


>gi|149192243|ref|ZP_01870457.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1]
 gi|148833916|gb|EDL50939.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1]
          Length = 340

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 98/324 (30%), Positives = 160/324 (49%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++   +L     I     +        + + +     + +   NP DP+ RQ +
Sbjct: 19  QLSN-AISDPYELLKQLEIDATPWENGLTARRLFPMRVPQSFVDRMEKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  +E  +     EDP+ +   + + G++H+Y +R LL +   C V CR+CFRR      
Sbjct: 78  PLSQEFEVHNGYSEDPL-EEQDAAVPGLLHKYHNRALLIVKGGCAVNCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +       + + AL YI    +I E+I +GGDPL+     L  +++    I H++ LR H
Sbjct: 135 EDNKGGKANWQVALDYIAAHPEIDEIILSGGDPLMAKDSELAWLVQKAESIHHLKTLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P+RI  EL Q LK+      +  H NH  E + E  A+++R+ N G  LL+Q 
Sbjct: 195 SRLPVVIPKRITEELCQLLKQTRLNTILVTHINHANEVNSEFSASMARIKNTGTTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  +    L      + I PYYLH  D   G +HF ++ ++ + I+  L +++
Sbjct: 255 VLLKGVNDSVDAQFELSHALFSVGILPYYLHVLDKVQGAAHFFISDDDAKAIIQGLIKRV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    +  G   K  +D H
Sbjct: 315 SGYLVPKLTREEGGRASKTPLDLH 338


>gi|327485135|gb|AEA79542.1| Lysine 2,3-aminomutase [Vibrio cholerae LMA3894-4]
          Length = 340

 Score =  398 bits (1023), Expect = e-109,   Method: Composition-based stats.
 Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLSAEFVIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPL+     +  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|162419358|ref|YP_001605297.1| KamA family iron-sulfur cluster-binding protein [Yersinia pestis
           Angola]
 gi|165926739|ref|ZP_02222571.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165936461|ref|ZP_02225029.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|166011849|ref|ZP_02232747.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166214027|ref|ZP_02240062.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|167400635|ref|ZP_02306144.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167419290|ref|ZP_02311043.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167423829|ref|ZP_02315582.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|170026033|ref|YP_001722538.1| lysine 2,3-aminomutase YodO family protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186893766|ref|YP_001870878.1| lysine 2,3-aminomutase YodO family protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|270489053|ref|ZP_06206127.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27]
 gi|294502464|ref|YP_003566526.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           Z176003]
 gi|162352173|gb|ABX86121.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           Angola]
 gi|165915577|gb|EDR34186.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Orientalis str. IP275]
 gi|165921362|gb|EDR38586.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Orientalis str. F1991016]
 gi|165989208|gb|EDR41509.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Antiqua str. E1979001]
 gi|166204822|gb|EDR49302.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Antiqua str. B42003004]
 gi|166963284|gb|EDR59305.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Orientalis str. MG05-1020]
 gi|167050003|gb|EDR61411.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Antiqua str. UG05-0454]
 gi|167057999|gb|EDR67745.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           biovar Mediaevalis str. K1973002]
 gi|169752567|gb|ACA70085.1| lysine 2,3-aminomutase YodO family protein [Yersinia
           pseudotuberculosis YPIII]
 gi|186696792|gb|ACC87421.1| lysine 2,3-aminomutase YodO family protein [Yersinia
           pseudotuberculosis PB1/+]
 gi|262360494|gb|ACY57215.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           D106004]
 gi|270337557|gb|EFA48334.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27]
 gi|294352923|gb|ADE63264.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           Z176003]
          Length = 334

 Score =  397 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +   + +       + + +       + P N +DP+  Q +  +EE
Sbjct: 15  ITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREE 74

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 75  FITAPGFTHDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  +L  L  IKH++ LR H+R+P+
Sbjct: 132 NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLRIHTRLPV 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L  +   V +  H NH  E       +++RL  AG+ LL+QSVLL+G
Sbjct: 192 VIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLNQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +N+D ++LA L     +  I PYY+H  D   G +HF +  +E ++++  L  ++SG   
Sbjct: 252 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 312 PRLTREVGGEPSKTPLDL 329


>gi|329296403|ref|ZP_08253739.1| putative lysine aminomutase [Plautia stali symbiont]
          Length = 342

 Score =  397 bits (1022), Expect = e-109,   Method: Composition-based stats.
 Identities = 95/303 (31%), Positives = 152/303 (50%), Gaps = 3/303 (0%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82
            ++    E    +++ +       +   N  DP+  Q +  ++E    P    DP+ + +
Sbjct: 39  AELAAGSEARRLFALRVPRAFIQRMQRGNAQDPLLLQVLTSRQEFTDAPGYSTDPLDEQS 98

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
            S + G++H+Y +R +L +   C V CR+CFRR           + ++ +AA+ YI    
Sbjct: 99  -SVVPGLLHKYKNRAMLLVKGGCAVNCRYCFRRHFPYQDNQG--NKRNWQAAIDYIAAHP 155

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           ++ E+IF+GGDPL+   + L  ++  L  I H++ LR HSR+P+V P RI   L Q L +
Sbjct: 156 ELDEIIFSGGDPLMAKDQELAWLIGALENIPHLKRLRIHSRLPVVIPARITEGLCQLLAD 215

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
               V +  H NH  E  E     + RL  AG+ LL+QSVLL+G+NDD + LA L     
Sbjct: 216 TRLQVLLVSHINHAQEIDEALRERMQRLKRAGVTLLNQSVLLRGVNDDAQTLAQLSNALF 275

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           +  I PYYLH  D   G +HF +  E+ + +V  L   +SG   P    ++ G   K  +
Sbjct: 276 DAGILPYYLHVLDKVQGAAHFFVPDEQARALVRQLLTMVSGYMVPKLAREIGGEPSKTPL 335

Query: 323 DTH 325
           D  
Sbjct: 336 DLQ 338


>gi|15642656|ref|NP_232289.1| hypothetical protein VC2661 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121590925|ref|ZP_01678247.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121727598|ref|ZP_01680706.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147674649|ref|YP_001218151.1| hypothetical protein VC0395_A2235 [Vibrio cholerae O395]
 gi|153819801|ref|ZP_01972468.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153821563|ref|ZP_01974230.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227082777|ref|YP_002811328.1| hypothetical protein VCM66_2581 [Vibrio cholerae M66-2]
 gi|229507290|ref|ZP_04396795.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286]
 gi|229509786|ref|ZP_04399267.1| lysine 2,3-aminomutase [Vibrio cholerae B33]
 gi|229516911|ref|ZP_04406357.1| lysine 2,3-aminomutase [Vibrio cholerae RC9]
 gi|229606796|ref|YP_002877444.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236]
 gi|254225400|ref|ZP_04919011.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|254851197|ref|ZP_05240547.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744377|ref|ZP_05418329.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101]
 gi|262158513|ref|ZP_06029628.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1]
 gi|262170093|ref|ZP_06037782.1| lysine 2,3-aminomutase [Vibrio cholerae RC27]
 gi|298500520|ref|ZP_07010324.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9657254|gb|AAF95802.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121547247|gb|EAX57371.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121630089|gb|EAX62494.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|125622034|gb|EAZ50357.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|126509662|gb|EAZ72256.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520948|gb|EAZ78171.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146316532|gb|ABQ21071.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227010665|gb|ACP06877.1| conserved hypothetical protein [Vibrio cholerae M66-2]
 gi|227014549|gb|ACP10759.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|229345974|gb|EEO10946.1| lysine 2,3-aminomutase [Vibrio cholerae RC9]
 gi|229353260|gb|EEO18199.1| lysine 2,3-aminomutase [Vibrio cholerae B33]
 gi|229354795|gb|EEO19716.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286]
 gi|229369451|gb|ACQ59874.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236]
 gi|254846902|gb|EET25316.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255737902|gb|EET93295.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101]
 gi|262021501|gb|EEY40213.1| lysine 2,3-aminomutase [Vibrio cholerae RC27]
 gi|262029674|gb|EEY48323.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1]
 gi|297540689|gb|EFH76746.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 340

 Score =  397 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 99/324 (30%), Positives = 164/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +         + +L YI +  Q+ EVIF+GGDPL+     +  +++ +  I H++ LR H
Sbjct: 135 EDNKGGKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|262364441|gb|ACY60998.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           D182038]
          Length = 334

 Score =  397 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +   + +       + + +       + P N +DP+  Q +  +EE
Sbjct: 15  ITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREE 74

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 75  FITAPGFTHDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  +L  L  IKH++ LR H+R+P+
Sbjct: 132 NKANWLKALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLRIHTRLPV 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L  +   V +  H NH  E       +++RL  AG+ LL+QSVLL+G
Sbjct: 192 VIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLNQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +N+D ++LA L     +  I PYY+H  D   G +HF +  +E ++++  L  ++SG   
Sbjct: 252 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 312 PRLTREVGGEPSKTPLDL 329


>gi|95931361|ref|ZP_01314073.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
 gi|95132577|gb|EAT14264.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
          Length = 345

 Score =  397 bits (1022), Expect = e-108,   Method: Composition-based stats.
 Identities = 131/350 (37%), Positives = 188/350 (53%), Gaps = 12/350 (3%)

Query: 1   MQLRHKTLTSAQDL--YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q R +      DL      L        + ++   Y + +TP    LI   +  DP+  
Sbjct: 4   WQERSRNSILCSDLVAQRFGLDS----HALAQVVERYPMRITPHQFELIRQAD--DPLGC 57

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q IP   EL        DP+ +   SP+  +VHRYP R+LL +   C  YCRFC R+  V
Sbjct: 58  QVIPDPRELLD-DSLLVDPLNEEQLSPVPHLVHRYPYRVLLLVAGSCFSYCRFCTRKRKV 116

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G      +S  D    + YI E  ++ EVI +GGDPL +S + L  VL  L  I H+Q++
Sbjct: 117 GCS-SMSVSLGDILKGIDYIAEHPEVNEVILSGGDPLTMSDRLLDDVLARLSRIPHLQVV 175

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R  SR P+V P+RI   L   L+   +PVY   H NHP E +E  + A  RL  +G+I+ 
Sbjct: 176 RIGSRAPVVMPERITDALCALLRRY-QPVYFLTHFNHPREITEATVEACQRLVRSGVIVA 234

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLL+G+ND+ E L  L  T   L+I+PYYLH  DL  GTSHFR  +E+G  I+  L+
Sbjct: 235 NQTVLLRGVNDNSETLFKLFHTLYRLQIRPYYLHQMDLTCGTSHFRTRLEDGIAIMDDLR 294

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
             +SGL  P YI+DLPGG+GKV +    ++++G+ +  +      + DYP
Sbjct: 295 GPLSGLAVPSYIVDLPGGHGKVPVTPDYVQRLGDHA-RLRAADGTLVDYP 343


>gi|318607441|emb|CBY28939.1| lysine 2,3-aminomutase [Yersinia enterocolitica subsp. palearctica
           Y11]
          Length = 343

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 96/324 (29%), Positives = 164/324 (50%), Gaps = 4/324 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +   + +       + + +       + P NP+DP+  Q +  +EE
Sbjct: 23  ITDPDELLRILQLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQVLTAREE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C + CR+CFRR           
Sbjct: 83  FIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPYQDNQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL Y+ +  ++ E+IF+GGDPL+     L  +L  +  I H++ LR H+R+P+
Sbjct: 140 NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWLLDEIESISHIKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL Q L ++   V +  H NH  E       ++++L  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRDSMAQLKRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD E+LA L  T  +  I PYY+H  D   G +HF +  +E ++++  L  ++SG   
Sbjct: 260 VNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTHNIKKV 330
           P    ++ G   K  +D   ++  
Sbjct: 320 PRLAREIGGQPSKTPLDLRLMQSE 343


>gi|258620467|ref|ZP_05715505.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258587346|gb|EEW12057.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 340

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 101/324 (31%), Positives = 164/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  + P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIATIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+N+  E    L  T  +  I PYYLH  D   G +HF ++ +E ++I+A L E++
Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDEARQIMAGLIERV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLIPKLTREIGGKPSKTPLDLH 338


>gi|262166674|ref|ZP_06034411.1| lysine 2,3-aminomutase [Vibrio mimicus VM223]
 gi|262026390|gb|EEY45058.1| lysine 2,3-aminomutase [Vibrio mimicus VM223]
          Length = 340

 Score =  397 bits (1021), Expect = e-108,   Method: Composition-based stats.
 Identities = 100/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  + P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIATIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+N+  E    L  T  +  I PYYLH  D   G +HF ++  E ++++A L E++
Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDAEARQLMAGLIERV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGKPSKTPLDLH 338


>gi|77465239|ref|YP_354742.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1]
 gi|77389657|gb|ABA80841.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1]
          Length = 340

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 156/343 (45%), Positives = 218/343 (63%), Gaps = 10/343 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64
           + L + +DL +A L    + + ++E++  + I LTP +         +DP +ARQF+P  
Sbjct: 3   RALENLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           +EL I PEE  DPIGD   SP+ G+ HRYPDR++L +   C VYCRFCFRRE+VGS+   
Sbjct: 57  DELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
           +L   D  AAL YI     + EVI TGGDPL LS +RL+ ++  L  I H+  +R HSRV
Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+V P RI+  +++ L     PV+I +H NHP E   +A AA+ RLA+ GI LLSQSVLL
Sbjct: 175 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           +G+ND  + L  L R  + LR+KPYYLHH DLA G  HFR TI+EG+ ++A L+ +I+G+
Sbjct: 234 RGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRPTIDEGRALMAELRRRITGI 293

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             P Y+LDLPGG+GKV +   ++   G G + + D    +H Y
Sbjct: 294 GLPSYVLDLPGGFGKVPLTYDHLIADGPGRWQVRDPQGGLHPY 336


>gi|262170406|ref|ZP_06038084.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451]
 gi|261891482|gb|EEY37468.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451]
          Length = 340

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 100/324 (30%), Positives = 164/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  + P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIATIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+N+  E    L  T  +  I PYYLH  D   G +HF ++ +E ++++A L E++
Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDEARQLMAGLIERV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGKPSKTPLDLH 338


>gi|197334541|ref|YP_002157135.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11]
 gi|197316031|gb|ACH65478.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11]
          Length = 340

 Score =  397 bits (1020), Expect = e-108,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 3/319 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            +++   L +   I     ++  E    +++ +     + +   NP DP+ RQ +P  +E
Sbjct: 23  AISNPHQLLSTLGIDSAPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +   +   G++H+Y +R+LL +   C V CR+CFRR      +    
Sbjct: 83  FEVHEGYSNDPL-EEQDNDQPGLLHKYKNRVLLIVKGGCAVNCRYCFRRHFPY--QDNKG 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S    + ++ YI    +I EVIF+GGDPL+     LQ +++ +  I H++ LR HSR+P+
Sbjct: 140 SKTVWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIEHIEAIPHIKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q  K+    + +  H NH  E ++  I+++ +L  A + LL+QSVLLKG
Sbjct: 200 VIPNRITDTLCQLFKKTRLQIILVTHINHANEINQTLISSMKKLKLAHVTLLNQSVLLKG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + L  L     +  I PYYLH  D   G +HF ++ E+ ++++  L E +SG   
Sbjct: 260 VNDNTDTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDEKAKQLMGELIENVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D +
Sbjct: 320 PTLAREIGGRKSKTPLDLY 338


>gi|302038861|ref|YP_003799183.1| l-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii]
 gi|300606925|emb|CBK43258.1| L-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii]
          Length = 377

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 129/348 (37%), Positives = 209/348 (60%), Gaps = 10/348 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +++   +DL +   +  ++I++I      Y + +TP +   I      D I +Q +P + 
Sbjct: 10  QSVVKPKDLADRLGVDPKEIEDI---VGDYPMRITPTVLATIKEKG--DAIWKQVVPDRA 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E+     E +DP+ ++  SP+  +VHRYPDR+LL + + CP+YCRFC R+ +VG  K   
Sbjct: 65  EMADADAE-DDPLEEDLMSPVPHLVHRYPDRVLLMVTNQCPIYCRFCTRKRLVG--KPGF 121

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L   + + A+AY++E  ++ +VI +GGDPL+L    L+++LK+LR I H++++R  +RVP
Sbjct: 122 LKKGELDRAIAYLREHQEVRDVILSGGDPLLLPDHLLERILKSLRTIPHLELIRIGTRVP 181

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
              P+RI P+L   +K+   P Y+ +H NHP E + E   A   LA+AG+ L +Q+VLLK
Sbjct: 182 GSLPERITPKLCDIIKKY-HPFYMNLHFNHPDELTPEVKRACGMLADAGVPLGAQTVLLK 240

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+NDDPEI+  LM   +  R+KPYYL+  DL  GT+HFR ++E G KI+ SL+   SG+ 
Sbjct: 241 GVNDDPEIMKRLMHQLLLARVKPYYLYQADLTKGTNHFRTSVETGLKIIKSLQGHTSGMG 300

Query: 306 QPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            P +++D PGG GK+ +     +  +   S  + ++ N    YP   S
Sbjct: 301 VPHFVIDAPGGGGKIPLLPADYLVNLDEDSAVLRNYENRTFHYPQPGS 348


>gi|229524637|ref|ZP_04414042.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426]
 gi|229338218|gb|EEO03235.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426]
          Length = 340

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 99/323 (30%), Positives = 164/323 (50%), Gaps = 4/323 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPL+     +  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDT 324
           SG   P    ++ G   K  +D 
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDL 337


>gi|59712946|ref|YP_205722.1| lysine aminomutase [Vibrio fischeri ES114]
 gi|59481047|gb|AAW86834.1| predicted lysine aminomutase [Vibrio fischeri ES114]
          Length = 340

 Score =  396 bits (1019), Expect = e-108,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 167/319 (52%), Gaps = 3/319 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            +++   L +   I     ++  E    +++ +     + +   NP DP+ RQ +P  +E
Sbjct: 23  AISNPHQLLSTLGIDSAPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ + ++  L G++H+Y +R+LL +   C V CR+CFRR      +    
Sbjct: 83  FEVHEGYSNDPLEEQDNQQL-GLLHKYKNRVLLIVKGGCAVNCRYCFRRHFPY--QDNKG 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S    + ++ YI    +I EVIF+GGDPL+     LQ ++  +  I H++ LR HSR+P+
Sbjct: 140 SKTIWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIDHIEAIPHIKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q   +    + +  H NH  E ++E I+++ +L  A + LL+QSVLLKG
Sbjct: 200 VIPNRITDTLCQLFTKTRLQIILVTHINHANEINQELISSMHKLKLAHVTLLNQSVLLKG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ + L  L     +  I PYYLH  D   G +HF ++ E+ +++++ L E +SG   
Sbjct: 260 VNDNADTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDEKAKQLMSELIENVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D +
Sbjct: 320 PTLAREIGGRKSKTPLDLY 338


>gi|158522524|ref|YP_001530394.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
           oleovorans Hxd3]
 gi|158511350|gb|ABW68317.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus
           oleovorans Hxd3]
          Length = 358

 Score =  396 bits (1018), Expect = e-108,   Method: Composition-based stats.
 Identities = 132/351 (37%), Positives = 198/351 (56%), Gaps = 10/351 (2%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  + +   +DL +              +   Y +++ P   +LI    P DP+ RQ
Sbjct: 17  WQTIAGRAIADPKDLPDRLKAPP----GAAAVCRAYPMSVNPYYLSLI--QAPGDPLWRQ 70

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   EL+    + +DP+ +   SP+ G++HRYPDR+++ +   CPV CRFCFR+ + G
Sbjct: 71  VVPDARELSGTLTD-DDPLTETAQSPVPGLIHRYPDRVVVLVSGRCPVVCRFCFRKRLAG 129

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                 L+    +AA AY++    + EVIF+GGDPL+L   +L   L+    I HV+ LR
Sbjct: 130 R-AAASLTDDQVDAAAAYVRAAPAVREVIFSGGDPLMLEDDKLCAALEKFAAIGHVETLR 188

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R P+  PQRI  +L+  LK+   P+Y+ +H NHP E +  A AA +RLA+AGI L S
Sbjct: 189 IHTRTPVALPQRITGDLVVLLKKF-LPLYVNVHVNHPREITAPAEAACARLADAGIPLGS 247

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL GINDD   +  LMR  + +R++PYYLHHPD+  GT HFR  I  G  ++ SL  
Sbjct: 248 QTVLLAGINDDAITMEALMRALLRIRVRPYYLHHPDVVKGTGHFRPPINRGLSVMRSLVG 307

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           ++ G+  P Y++DLPGG GKV +    +     G   + ++   V  YP K
Sbjct: 308 RVPGMAVPRYVIDLPGGGGKVPLLPDYVVSSETGHLVVKNYQGKVFVYPEK 358


>gi|242237917|ref|YP_002986098.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
           Ech703]
 gi|242129974|gb|ACS84276.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
           Ech703]
          Length = 348

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 99/318 (31%), Positives = 161/318 (50%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     +    +  +  E    + + +    A  + P +P+DP+ +Q I  K E
Sbjct: 23  ITDPGELLQLLALSDHPLLSQGHEARKLFPLRVPRAFAARMQPGDPDDPLLKQVITSKAE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR     +     
Sbjct: 83  FLLTPGFTNDPLDEQR-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +   AL YI++  ++ E+IF+GGDPL+     L  +L  L  I H++ LR HSR+P+
Sbjct: 140 SKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDGLLTGLEEITHLKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L   L ++   + +  H NH  E   E    + RL  AG+ LL+QSVLL+G
Sbjct: 200 VIPARITEALSLRLAQSRLQILLVTHINHANEIDAELAQGLHRLRRAGVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + LANL     +  + PYYLH  D   G +HF +  ++   ++ +L  ++SG   
Sbjct: 260 VNDSADELANLSHALFDAGVMPYYLHVLDKVQGAAHFLVPDDKATALIKTLMTQVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P  + ++ G   K  +D 
Sbjct: 320 PRLVREIGGEASKTPLDL 337


>gi|260463114|ref|ZP_05811317.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium
           opportunistum WSM2075]
 gi|259031235|gb|EEW32508.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium
           opportunistum WSM2075]
          Length = 366

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 139/349 (39%), Positives = 200/349 (57%), Gaps = 5/349 (1%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q   +  +   +DL  A  +   +    ++ +  + + +     +LI+ ++P DPI  Q
Sbjct: 15  WQDDVRQGVRHVRDL-AALPLSPAERQAAQQAATLHKVRVPKTYLDLIDWNDPADPIRAQ 73

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            IP  +EL     E  DPI D++ SP+  + HR+ DR+LL   + C VYCRFCFR+E + 
Sbjct: 74  VIPSPDELVEAEGELGDPIADHDFSPVPRLTHRHGDRVLLFPTYQCAVYCRFCFRKESLT 133

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           S  G   + +  E ALAYI + S+I EVI TGGDPL LS K L ++   +  I HV++LR
Sbjct: 134 S-IGRGYTREALEPALAYIADHSEIREVILTGGDPLSLSDKALAEIFMRIEAIPHVRLLR 192

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+RVP+  P RI P L++ L +    V +  H NH  E ++ A AA   +  AG +LL+
Sbjct: 193 IHTRVPVALPSRITPGLVEAL-QGRLMVTVVTHFNHAREITDAAEAACRTMRQAGFVLLN 251

Query: 240 QSVLLKGINDDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           QSVLLKG+ND  E+L  L R     L +KPYYLHH DLA G +H R TI +GQ +V +L+
Sbjct: 252 QSVLLKGVNDSVEVLEELCRELMYRLGVKPYYLHHGDLARGMAHRRTTIAQGQALVEALR 311

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            ++SG+C P Y+LDLP G GKV +   +I+     S+ I      V  Y
Sbjct: 312 ARLSGICNPVYVLDLPEGGGKVPLGPCSIEGRDGESWRIRGQDGAVRGY 360


>gi|83591564|ref|YP_425316.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170]
 gi|83574478|gb|ABC21029.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170]
          Length = 324

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 170/318 (53%), Positives = 219/318 (68%), Gaps = 2/318 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +L S  DL  A LI  E++ E+  +   Y++A+   +A  I    P+  +ARQF+P   E
Sbjct: 6   SLRSLTDLAEAGLIAPERLAELAPVVARYALAIPAGLAQAIAEAGPDSALARQFVPSAAE 65

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L  LPEE  DPIGD+ HSP+KG+VHRYPDR+LLK +H CPVYCRFCFRRE VG   G  L
Sbjct: 66  LTTLPEEITDPIGDHAHSPVKGLVHRYPDRVLLKPVHACPVYCRFCFRREHVGP-GGESL 124

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +    LAYI +  +IWEV+ +GGDP+ILS +RL  +L  L  I H+  LR HSRVP+
Sbjct: 125 SEAEMARVLAYIGDHREIWEVVLSGGDPMILSARRLDALLGALEAIPHIGSLRIHSRVPV 184

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           +DP RI P +I  L+ + KPV++ IHANHP EF+  A A ++ LA+AG+ LLSQSVLLKG
Sbjct: 185 LDPARITPAVIAALRRS-KPVWLVIHANHPDEFTAAARACVASLADAGVPLLSQSVLLKG 243

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   L  LMRTFV  RIKPYYLH  D+A GT+HFR +++EG+ +VA+L+   SGLCQ
Sbjct: 244 VNDDLATLTRLMRTFVANRIKPYYLHQTDMAPGTAHFRTSLDEGRALVAALRATASGLCQ 303

Query: 307 PFYILDLPGGYGKVKIDT 324
           P Y+LD P G GK  ID 
Sbjct: 304 PTYVLDAPDGPGKRPIDV 321


>gi|296100915|ref|YP_003611061.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
 gi|295055374|gb|ADF60112.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC
           13047]
          Length = 342

 Score =  396 bits (1017), Expect = e-108,   Method: Composition-based stats.
 Identities = 102/297 (34%), Positives = 162/297 (54%), Gaps = 3/297 (1%)

Query: 29  KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
           +E    +++ +       +   NP+DP+ +Q +  +EE    P    DP+ +  +S + G
Sbjct: 45  REAKRLFALRVPRAFVARMEKGNPDDPLLKQTLTAQEEFITAPGYSTDPL-EEQNSVVPG 103

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           ++H+Y +R LL +   C V CR+CFRR    ++     + ++ + AL YI   S++ E+I
Sbjct: 104 LLHKYLNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQVALDYIAAHSELDEII 161

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           F+GGDPL+     L  +L  L  I H++ LR HSR+PIV P RI   L+  L+++   V 
Sbjct: 162 FSGGDPLMAKDYELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDGLVSRLEQSRLQVL 221

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           +  H NH  E  +   AA+ RL  AG+ LL+QSVLL+G+ND+  +LA+L     +  + P
Sbjct: 222 LVNHINHANEIDDAFRAAMVRLRKAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMP 281

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           YYLH  D   G +HF +T EE ++IV  L   +SG   P    ++ G   K  +D  
Sbjct: 282 YYLHVLDRVQGAAHFMVTDEEARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLDLQ 338


>gi|330837285|ref|YP_004411926.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides
           DSM 17374]
 gi|329749188|gb|AEC02544.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides
           DSM 17374]
          Length = 358

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 115/335 (34%), Positives = 185/335 (55%), Gaps = 3/335 (0%)

Query: 15  YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER 74
               ++  E+    ++        ++   A+LI P + +DPI RQ +P   E+   P E 
Sbjct: 20  RKQGIVLTEKEQAWEKDGTSPPFGVSTYYASLITPSDSDDPIRRQILPTSCEMMYSPGES 79

Query: 75  EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
           EDP+ +  HS    ++HRY +R+   +   C VYCR CFRR   G+Q+G   +++D  AA
Sbjct: 80  EDPLAEEEHSVTSRLIHRYAERVAFLVTDACAVYCRHCFRRRFTGTQRG-PATTEDIIAA 138

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
             Y+    ++ E++FTGGD   LS++++  ++   R ++   I+R  SRVP+V P RI  
Sbjct: 139 ARYVGAHQEVKEILFTGGDMFTLSNEKIDALIGEFRAVRPDLIIRLCSRVPVVLPSRITD 198

Query: 195 ELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
            L+  +K+    P ++ +  NHP E + ++  A +R  +AGI + +QSVLL+G+NDD  I
Sbjct: 199 GLMAVMKKHSSAPFFLMVQFNHPRELTAQSREATARFIDAGIPVFNQSVLLRGVNDDAGI 258

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
           L  L    +  RIKPYYL   DL  GT+H R+ +E+G  +V  L+ ++SGL  P Y +DL
Sbjct: 259 LEELCNGLLAARIKPYYLFQGDLVEGTAHLRVPLEKGLALVKELRRRLSGLAMPVYAVDL 318

Query: 314 PGGYGKVKIDTHNIKKV-GNGSYCITDHHNIVHDY 347
           P G GKV +D+  +K    +G++           Y
Sbjct: 319 PEGGGKVPVDSMYLKGRDSDGAWVFETPDGGERRY 353


>gi|37527976|ref|NP_931321.1| hypothetical protein plu4131 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787412|emb|CAE16503.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 342

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 98/318 (30%), Positives = 159/318 (50%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + K   + +       + + +       +   +PNDP+  Q I   EE
Sbjct: 23  ITDPDELLQLLSLDKHPTLTKGSGARRLFPLRVPRAFVTRMQVSDPNDPLLLQVITTPEE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +   S + G++H+Y +R LL +   C + CR+CFRR      +    
Sbjct: 83  FTLTPGFSTDPLDEQR-SAVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPY--EDNKG 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YIQ+  ++ E+IF+GGDPL+     L  ++  L  I H++ LR H+R+P+
Sbjct: 140 NKRNWQQALDYIQQHPELDEIIFSGGDPLMAKDHELDWLISNLEKISHIKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L   L ++   V +  H NH  E  +    ++  L  AGI LL+QSVLL+G
Sbjct: 200 VIPARITTTLCDRLAQSRLQVIMVTHINHANEIDQSLRNSMILLKQAGITLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IN+  + LA+L     +  I PYY+H  D   G +HF +  EE + ++  L  KISG   
Sbjct: 260 INNHSDTLADLSNALFDAGILPYYIHVLDKVQGAAHFMVNDEEAKGLIRELLTKISGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PRLAREIGGEPSKTPLDL 337


>gi|254509350|ref|ZP_05121438.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16]
 gi|219547715|gb|EED24752.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16]
          Length = 340

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 98/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I   +  +       ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAKLLEKLEIDPAKWQDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  +E  +      DP+ +  +    G++H+Y +R L+ +   C V CR+CFRR     +
Sbjct: 78  PLSQEFEVHEGYSNDPLQEQGNE-TPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                +    + +L YI+++S++ EVI +GGDPL+   + LQ ++  +  I H++ +R H
Sbjct: 137 NKG--NKLVWQQSLDYIRQQSELNEVILSGGDPLMAKDEELQWLINHIADIPHIKRIRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI PEL+  L  +   V +  H NH  E + E   A+  L  AG+ LL+Q 
Sbjct: 195 SRLPVVIPARITPELLAILSGSRLQVIMVTHINHAQEINHELKRAMYDLKQAGVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           V+LKG+ND  E    L  T  +  I PYY+H  D   G +HF ++ ++ + I+A L E++
Sbjct: 255 VMLKGVNDCVEAQVALSETLFDAGILPYYMHVLDKVQGAAHFYISDQQAKAIMAGLLERV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRKSKTPLDLH 338


>gi|261345001|ref|ZP_05972645.1| KamA family protein [Providencia rustigianii DSM 4541]
 gi|282567147|gb|EFB72682.1| KamA family protein [Providencia rustigianii DSM 4541]
          Length = 342

 Score =  395 bits (1016), Expect = e-108,   Method: Composition-based stats.
 Identities = 97/325 (29%), Positives = 165/325 (50%), Gaps = 4/325 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           Q   + +T+  +L     ++      E  E    + + +     + +   +P+DP+  Q 
Sbjct: 17  QQLAEAVTNPDELLQILNLEDHLPSREGNEARKLFPLRVPRPFISRMKKGDPSDPLLLQV 76

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +  K E +I P    DP+ +   + +  ++H+Y +R L+ +   C V CR+CFRR     
Sbjct: 77  LTAKTEFDIHPGFSTDPL-EEQDNEIPSLLHKYHNRALMLVKGGCAVNCRYCFRRHFPY- 134

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +    +  +   A+ YI+  S++ E+IF+GGDPL+     L  ++  L  I H+  LR 
Sbjct: 135 -EDNKGNKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQLEDIPHITRLRI 193

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           HSR+P+V P+RI   L + L+++   V +  H NH  E  +    A+ +L  AG+ LL+Q
Sbjct: 194 HSRLPVVIPERITNTLCKRLEQSRLHVIMVTHVNHANEIDDSFTHAMQKLKRAGVTLLNQ 253

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+ +ND+   LANL     E  I PYYLH  D   G +HF ++  E ++++  L  K
Sbjct: 254 SVLLRQVNDNVTALANLSNALFEAGILPYYLHVLDKVQGAAHFLVSDNEARELIRELLSK 313

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
           +SG   P    ++ G   K  +D +
Sbjct: 314 VSGYLVPKLAREIGGEPSKTLLDLN 338


>gi|218708305|ref|YP_002415926.1| hypothetical protein VS_0243 [Vibrio splendidus LGP32]
 gi|218321324|emb|CAV17274.1| Hypothetical protein VS_0243 [Vibrio splendidus LGP32]
          Length = 340

 Score =  394 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 153/324 (47%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L  A  I      +       +S+ +       +   NP+DP+ RQ +
Sbjct: 19  QLSN-AISDPTKLLEALEIDPTPWQKGFAARELFSLRVPLSFVERMEKGNPHDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  +      DP+ +   + + G++H+Y  R L+ +   C + CR+CFRR      
Sbjct: 78  PLSEEFEVHQGYSADPL-EEQDNAIPGLLHKYKSRALMIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L Y+ +  +I EVI +GGDPL+     L+ ++  +  I HV+ +R H
Sbjct: 135 QDNKGSKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAIEQIPHVKTVRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P R+  EL Q L      V +  H NH  E + E   A  +L   G  LL+Q 
Sbjct: 195 SRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHKLKQTGATLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           V+LKG+N+    L  L     +  I PYY+H  D   G +HF ++ EE +     L  ++
Sbjct: 255 VMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEEAKHHFKGLISEV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLH 338


>gi|261211227|ref|ZP_05925516.1| lysine 2,3-aminomutase [Vibrio sp. RC341]
 gi|260839728|gb|EEX66339.1| lysine 2,3-aminomutase [Vibrio sp. RC341]
          Length = 340

 Score =  394 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 99/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  + P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLNAEFEVHPGYSNDPLDEQNNA-IPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    + +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND       L  T  +  I PYYLH  D   G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTVAAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|229521724|ref|ZP_04411142.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80]
 gi|229341318|gb|EEO06322.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80]
          Length = 340

 Score =  394 bits (1014), Expect = e-108,   Method: Composition-based stats.
 Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPLRLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  I P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPL+     +  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEVNLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  +   +L  T  +  I PYYLH  D   G +HF ++ ++ ++I+A L E++
Sbjct: 255 VLLKGVNDTLDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|284008180|emb|CBA74439.1| radical SAM superfamily protein [Arsenophonus nasoniae]
          Length = 340

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 109/325 (33%), Positives = 165/325 (50%), Gaps = 4/325 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           Q   + +T   +L     ++   ++         + + +       +   + NDP+ RQ 
Sbjct: 17  QQLAEAVTDPDELLRLLSLQNNPELRAGSAARALFPLRVPHPFIAKMRIGDANDPLLRQV 76

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           I  K E N+ P    DP+ ++ HSP+ G++H+Y DR+LL +   C V CR+CFRR     
Sbjct: 77  ITLKSEFNLTPTFSADPLNEH-HSPIPGLLHKYQDRVLLLVKGGCAVNCRYCFRRHFPYE 135

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +     + ++ + AL YIQ  +++ EVIF+GGDPL+     L  ++  L  I H++ LR 
Sbjct: 136 ENKG--NKQNWQTALNYIQRHTELNEVIFSGGDPLMAKDHELDWLMSRLETIPHIKRLRI 193

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           HSR+P+V P RI   L Q    +   V +  H NH  E   E   A+ +L    + LL+Q
Sbjct: 194 HSRLPVVIPARITTTLCQRFNISRLQVIMVTHINHANEIDNEFSHAMEQLKQVNVTLLNQ 253

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+GIND+ + LA L     E  I PYYLH  D   G +HF +T EE + I+  L  +
Sbjct: 254 SVLLRGINDNADSLAKLSNKLFENGILPYYLHLLDKVQGAAHFMVTDEEARIIMKELLTR 313

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
           ISG   P    ++ G   K  ID  
Sbjct: 314 ISGYLVPRLTREIGGKLSKTPIDLQ 338


>gi|148976876|ref|ZP_01813531.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3]
 gi|145963750|gb|EDK29010.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3]
          Length = 340

 Score =  394 bits (1012), Expect = e-107,   Method: Composition-based stats.
 Identities = 97/324 (29%), Positives = 158/324 (48%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L  A  I            N +++ +       +   NP+DP+ RQ +
Sbjct: 19  QLSN-AISDPTKLLEALEIDPTPWQAGFAARNLFALRVPLSFVERMEKGNPHDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  +      DP+ +   + + G++H+Y +R L+ +   C V CR+CFRR      
Sbjct: 78  PLSEEFEVHEGYSADPL-EEQDNAIPGLLHKYKNRALMIVKGGCAVNCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L Y+ + S+I EVI +GGDPL+     ++ ++  +  I HV+ +R H
Sbjct: 135 QDNKGSKSVWQTSLDYVAQHSEINEVILSGGDPLMAKDSEIEWLIHAIEQIPHVETVRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL Q L +    V +  H NH  E + E   A+ +L  +G  LL+Q 
Sbjct: 195 SRLPVVIPARITDELCQTLSKTRLNVVMVSHINHANEINVELKQALLKLKFSGATLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           V+LKG+N+    L  L     +  I PYY+H  D   G +HF ++ EE +     L  ++
Sbjct: 255 VMLKGVNNSANSLKELSEKLFDAGILPYYMHVLDKVQGAAHFYISDEEAKHHFKGLISEV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLH 338


>gi|320155059|ref|YP_004187438.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O]
 gi|319930371|gb|ADV85235.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O]
          Length = 340

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 101/324 (31%), Positives = 162/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +       ++  +       +   NPNDP+ RQ +
Sbjct: 19  QLAN-GISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  I P    DP+ +   + + G++H+Y +R L+ +   C + CR+CFRR      
Sbjct: 78  PVSEEHEIHPGYSVDPL-EEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI + S + EVIF+GGDPL+     LQ +++ +  I H++ LR H
Sbjct: 135 QDNKGSKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERIADIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL Q L++    V +  H NH  E + E  + + RL   G+ LL+Q 
Sbjct: 195 SRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHRLKRIGVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  E   +L     +  + PYYLH  D   G +HF ++ +E + I+  L  ++
Sbjct: 255 VLLKGVNDSVEAQVHLSEALFDAGVLPYYLHVLDKVQGAAHFYVSDQEAKAIMRGLITQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D +
Sbjct: 315 SGYLVPTLTREIGGRPSKTPLDLY 338


>gi|269962491|ref|ZP_06176840.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269832787|gb|EEZ86897.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 340

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 160/324 (49%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +       ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAKLLEMLEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  +      DP+ +   + L G++H+Y +R L+ +   C V CR+CFRR     +
Sbjct: 78  PLSEEFEVHEGYSNDPL-EEQDNELPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
             +    +     L Y+ ++ ++ EVIF+GGDPL+     +  +L+ +  I H++ LR H
Sbjct: 137 NKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAKIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL   L+ +   + +  H NH  E + E  A +++L  AG+ LL+Q 
Sbjct: 195 SRLPVVIPARITDELCHLLRASRLQIVLVTHINHANEINAEFAAQMAKLKQAGVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLK +N+  E    L     +  I PYYLH  D   G +H+ ++ EE ++I+  +  ++
Sbjct: 255 VLLKDVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEAKEIMRGVITRV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|37681287|ref|NP_935896.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016]
 gi|37200038|dbj|BAC95867.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016]
          Length = 340

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 102/324 (31%), Positives = 162/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +       ++  +       +   NPNDP+ RQ +
Sbjct: 19  QLAN-GISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  I P    DP+ +   + + G++H+Y +R L+ +   C + CR+CFRR      
Sbjct: 78  PVSEEHEIHPGYSVDPL-EEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI + S + EVIF+GGDPL+     LQ +++ +  I H++ LR H
Sbjct: 135 QDNKGSKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERIADIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL Q L++    V +  H NH  E + E  + + RL   G+ LL+Q 
Sbjct: 195 SRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHRLKRIGVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  E   +L     +  I PYYLH  D   G +HF ++ +E + I+  L  ++
Sbjct: 255 VLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQEAKAIMRGLITQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D +
Sbjct: 315 SGYLVPTLTREIGGRPSKTPLDLY 338


>gi|268590834|ref|ZP_06125055.1| KamA family protein [Providencia rettgeri DSM 1131]
 gi|291313616|gb|EFE54069.1| KamA family protein [Providencia rettgeri DSM 1131]
          Length = 342

 Score =  393 bits (1011), Expect = e-107,   Method: Composition-based stats.
 Identities = 95/325 (29%), Positives = 163/325 (50%), Gaps = 4/325 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           Q   + +T+  +L     ++   +  E  E    + + +     + +   +P DP+  Q 
Sbjct: 17  QQLAEAITNPDELLQILNLENHLLSKEGSEARKLFPLRVPMPFISRMKKGDPLDPLLLQV 76

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +  K E +I P    DP+ +   + +  ++H+Y +R LL +   C V CR+CFRR     
Sbjct: 77  LTAKAEFDIHPGFSTDPL-EEQDNEIPSLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY- 134

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +    +  +   A+ YI+  +++ E+IF+GGDPL+     L  ++  L  I H+Q LR 
Sbjct: 135 -EDNKGNKNNWLMAVDYIKNHTELNEIIFSGGDPLMAKDHELDWLISQLEAIPHIQRLRI 193

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           H+R+P+V P+RI   L + L  +   V +  H NH  E  E    A+ +L  +G+ LL+Q
Sbjct: 194 HTRLPVVIPERITETLCKRLASSRLQVIMVTHVNHANEIDESFTNAMQKLKLSGVTLLNQ 253

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+ +ND+   L NL     +  I PYYLH  D   G +HF ++  E ++++  L  K
Sbjct: 254 SVLLRQVNDNVTALMNLSNALFDTGILPYYLHVLDKVQGAAHFLVSDTEARQLIQQLLSK 313

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
           +SG   P    ++ G   K  +D +
Sbjct: 314 VSGYLVPKLAREIGGEPSKTLLDLN 338


>gi|325970648|ref|YP_004246839.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
 gi|324025886|gb|ADY12645.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy]
          Length = 363

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 128/349 (36%), Positives = 199/349 (57%), Gaps = 3/349 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q +   +TS + L     + +++     +++N   + +     NLI+P++P+DPI RQ +
Sbjct: 4   QQQSTIITSKETLGQYLALAEDEWLFDADLTNTLPLKIPMYFLNLIDPNDPDDPIRRQVV 63

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P+ +E  IL EE+ DP+ + N+S  + ++HRY  R+      VCP+YCR CFRR   G+ 
Sbjct: 64  PRWQEQRILDEEQLDPLCEVNYSVTERLIHRYQSRVAFLTTDVCPLYCRHCFRRRFTGTF 123

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +G   S +  E A  Y+     + E++FTGGD   LS K L+ +++T R  +   ++R  
Sbjct: 124 QG-PASKEQIEKAAEYVAVHPAVKEILFTGGDVFTLSTKALEAMIQTFRDKRPDLVIRLC 182

Query: 182 SRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           SR+P   P RI+ +LI  LK+    P Y+    NH  E +E+AI A+    +AGI  ++Q
Sbjct: 183 SRMPASYPMRIDADLIAMLKQFNTAPFYLMTQFNHRRELTEQAIQAVRMFVDAGIPAMNQ 242

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +VLLKG+NDD  +L  L  T V  RIKPYYL   DL +GT+HFR+ ++EG  I A L+++
Sbjct: 243 TVLLKGVNDDVCVLEELCNTLVFNRIKPYYLFQGDLVSGTAHFRVPLKEGLAIEAELRKR 302

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKV-GNGSYCITDHHNIVHDYP 348
           +SGL  P Y +DLP G GKV +    + +  G G +        +  YP
Sbjct: 303 LSGLAMPLYAIDLPQGGGKVPLMQGYLSEQSGCGLWSFRTVEGEIRTYP 351


>gi|86147223|ref|ZP_01065538.1| lysine 2;3-aminomutase [Vibrio sp. MED222]
 gi|85834938|gb|EAQ53081.1| lysine 2;3-aminomutase [Vibrio sp. MED222]
          Length = 340

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 155/324 (47%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L  A  I      +       +S+ +       +   NP+DP+ RQ +
Sbjct: 19  QLSN-AISDPTKLLEALEIDPTPWQKGFAARELFSLRVPLSFVERMEKGNPHDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE ++      DP+ +  ++ + G++H+Y  R L+ +   C + CR+CFRR      
Sbjct: 78  PLSEEFDVHQGYSADPLEEQENA-IPGLLHKYKSRALMIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L Y+ +  +I EVI +GGDPL+     L+ ++  +  I HV+ +R H
Sbjct: 135 QDNKGSKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAIEQIPHVKTVRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P R+  EL Q L      V +  H NH  E + E   A  +L   G  LL+Q 
Sbjct: 195 SRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHKLKQTGATLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           V+LKG+N+    L  L     +  I PYY+H  D   G +HF ++ EE +     L  ++
Sbjct: 255 VMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEEAKHHFKGLISEV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D +
Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLN 338


>gi|238756148|ref|ZP_04617468.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC
           29473]
 gi|238705622|gb|EEP98019.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC
           29473]
          Length = 334

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +  ++ +       + + +       +   +  DP+  Q +  +EE
Sbjct: 15  ITDPDELLCLLALNEHAELRQGTAARRLFPLRVPRAFVARMRSGDAKDPLLLQVLTAREE 74

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
              +P   +DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 75  FIAVPGFTDDPLDEQR-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  + + AL YI +  ++ E+IF+GGDPL+     L  ++  L  I H++ LR H+R+P+
Sbjct: 132 NKANWQQALDYIAQHPELDEIIFSGGDPLMAKDHELDWLITQLENIAHIKRLRIHTRLPV 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L ++   V +  H NHP E  +    +++RL  AG+ LL+QSVLL+ 
Sbjct: 192 VIPARITSTLCQRLLDSRLQVLLVTHINHPNEIDQSLCDSMARLKQAGVTLLNQSVLLRD 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +N+DP++LA L        I PYY+H  D   G +HF +  +E + ++  L  ++SG   
Sbjct: 252 VNNDPDVLAALSHALFNAGILPYYIHVLDKVQGAAHFMVDDDEARLLIKGLLSRVSGYLV 311

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 312 PRLAREIGGEPSKTPLDL 329


>gi|188535099|ref|YP_001908896.1| hypothetical protein ETA_29810 [Erwinia tasmaniensis Et1/99]
 gi|188030141|emb|CAO98027.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99]
          Length = 342

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 96/296 (32%), Positives = 154/296 (52%), Gaps = 3/296 (1%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           +    +++ +    A  +   +P DP+  Q I  ++E    P    DP+ + + S + G+
Sbjct: 46  DARRLFALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           +H+Y +R LL +   C V CR+CFRR     +     + ++ + AL YI+++ ++ E+IF
Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIF 162

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL+     L  ++  L +I H++ LR HSR+P+V P+RI   L Q L ++     +
Sbjct: 163 SGGDPLMAKDHELDWLIAQLEHIPHIKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLM 222

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
             H NH  E  +E    +  L  AG+ LL+QSVLL+ INDD   LA L     +  I PY
Sbjct: 223 VTHINHAQEIDDELRHGMRMLKRAGVTLLNQSVLLRDINDDAVTLAALSNALFDAGILPY 282

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           YLH  D   G +HF ++ E  + IV  L   +SG   P    ++ G   K  +D  
Sbjct: 283 YLHVLDKVQGAAHFYVSDERARAIVRELLTNVSGYMVPKLAREIGGEPSKTPLDLQ 338


>gi|209696199|ref|YP_002264129.1| hypothetical protein VSAL_I2793 [Aliivibrio salmonicida LFI1238]
 gi|208010152|emb|CAQ80477.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 340

 Score =  393 bits (1010), Expect = e-107,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 160/319 (50%), Gaps = 3/319 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            ++    L +   I     ++  E    +++ +     + +   NP DP+ RQ +P  +E
Sbjct: 23  AISDPHQLLSTLGIDSSPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ + ++    G++H+Y +R+LL L   C V CR+CFRR      +    
Sbjct: 83  FEVHDGYSTDPLDEQDNEQ-PGLLHKYKNRVLLILKGGCAVNCRYCFRRHFPY--EDNKG 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                + ++ YI    ++ EVI +GGDPL+     L+ +++ L  + H++ LR HSR+P+
Sbjct: 140 GKSVWQNSINYIAAHPELNEVILSGGDPLMAKDHELEWLIQHLDKVPHIKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L +   E    V +  H NH  E S      +++L  A + LL+QSVLLKG
Sbjct: 200 VIPNRITDTLCRLFAETRLQVILVTHINHANEISPYFTDKMTQLKQANVTLLNQSVLLKG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND  + L NL     +  I PYYLH  D   G +HF ++ E+ ++++A L E +SG   
Sbjct: 260 INDTSKALTNLSEALFDAGILPYYLHVLDKVQGAAHFFVSDEKAKELMAELIENVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D +
Sbjct: 320 PTLAREIGGRKSKTPLDLY 338


>gi|312882797|ref|ZP_07742531.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122]
 gi|309369581|gb|EFP97099.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122]
          Length = 340

 Score =  392 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 99/324 (30%), Positives = 167/324 (51%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++  + L     I  +           ++  +     + +   NPNDP+ RQ +
Sbjct: 19  QLAN-GISDPETLLKQLQIDPQPWSAGFRARKLFAQRVPQSFIDRMEKGNPNDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  +E NI PE   DP+ +   + + G++H+Y +R+L+ +   C + CR+CFRR    S+
Sbjct: 78  PLIDEFNIHPEYSSDPL-EEQSNEIPGLLHKYHNRVLMIVKGGCAINCRYCFRRHFPYSE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                +    + +L YI    +I EVI +GGDPL+     L+ +   +  I HV+ LR H
Sbjct: 137 NKG--TKSVWQQSLRYISLHKEIDEVILSGGDPLMAKDDELRWLFSEIAKISHVKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  ELI+ ++       +  H NH  E + E   A+ +L  A + LL+Q 
Sbjct: 195 SRLPVVIPARITSELIELIENNRLTTILVTHVNHANEINIELKQALQKLKAANVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           V+LKG+ND+ +    L +T  +  + PYY+H  D   G +HF ++ +  ++I+A L E++
Sbjct: 255 VMLKGVNDNADAQVQLSQTLFDAGVMPYYMHVLDKVQGATHFFISDQRAREIMAELIERV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREVGGRKSKTPLDLH 338


>gi|84386955|ref|ZP_00989979.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01]
 gi|84378245|gb|EAP95104.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01]
          Length = 340

 Score =  392 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 93/324 (28%), Positives = 155/324 (47%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L  A  I              +++ +       +   NP+DP+ RQ +
Sbjct: 19  QLSN-AISDPSKLLEALEIDPTPWQAGFAARELFALRVPLSFVERMEKGNPHDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  +      DP+ +  ++ + G++H+Y +R L+ +   C + CR+CFRR      
Sbjct: 78  PLNEEFEVHQGYSADPLEEQENA-IPGLLHKYKNRALMIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L Y+ +  +I EVI +GGDPL+     L+ ++  +  I HV+ +R H
Sbjct: 135 QDNKGSKSVWQTSLDYVTQHPEINEVILSGGDPLMAKDSELEWLINAIEQIPHVKTVRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P R+  EL Q L      V +  H NH  E + E   A  +L   G  LL+Q 
Sbjct: 195 SRLPVVIPARVTDELCQLLANTRLNVVMVSHINHANEINLELKQAFHKLKQTGATLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           V+LKG+N+    L  L     +  + PYY+H  D   G +HF ++ EE ++    L  ++
Sbjct: 255 VMLKGVNNSANSLKELSENLFDAGVLPYYMHVLDKVQGAAHFYISDEEAKRHFKGLISEV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLH 338


>gi|258625680|ref|ZP_05720559.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258581918|gb|EEW06788.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 340

 Score =  392 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 101/324 (31%), Positives = 162/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E    P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLGAEFEAHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPL+     L  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKVIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLVERIATIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    V +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAINVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+N+  E    L  T  +  I PYYLH  D   G +HF +  +E ++I+A L E++
Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVGDDEARQIMAGLIERV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGKPSKTPLDLH 338


>gi|92114650|ref|YP_574578.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043]
 gi|91797740|gb|ABE59879.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043]
          Length = 356

 Score =  392 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 100/323 (30%), Positives = 162/323 (50%), Gaps = 3/323 (0%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q + +  +    +L     +    +   +     + + +       I P +P+DP+ RQ
Sbjct: 35  WQAQLRDAVRDPHELCRRLDLDTAWLGGAETGHALFPVRVPHAYLARIRPGDPDDPLLRQ 94

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E   +     DP+ +  H P  G++H+Y +R+LL     C + CR+CFRR    
Sbjct: 95  VLPLDRESEPVAGFVGDPLEEAEHRPRPGLIHKYRNRVLLIASPACAINCRYCFRRHFPY 154

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           ++     S    E  L Y+++ + I E IF+GGDPL    +RL  + + L  I H++ LR
Sbjct: 155 AEN--SPSRGQWETTLDYLRQDTSINEAIFSGGDPLASPDRRLAWLAERLADIPHLKRLR 212

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P R++  L+  L        + +H NHP E       A+ RL  AG+ LL+
Sbjct: 213 LHTRLPVVIPDRVDSPLLDWLAATRLQTVMVVHINHPNEIDAGVADAMQRLRGAGVTLLN 272

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+G+NDD E LA L     E+ I PYYLH  D   G +HF +   E   +V +L+ 
Sbjct: 273 QSVLLRGVNDDVETLARLSERLFEVGILPYYLHVLDPVEGAAHFDVPDAEAVSLVETLRT 332

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           +++G   P  + ++PG   K  +
Sbjct: 333 QLAGFLMPRLVREVPGEASKTPL 355


>gi|332140129|ref|YP_004425867.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
           str. 'Deep ecotype']
 gi|327550151|gb|AEA96869.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
           str. 'Deep ecotype']
          Length = 341

 Score =  392 bits (1009), Expect = e-107,   Method: Composition-based stats.
 Identities = 107/319 (33%), Positives = 164/319 (51%), Gaps = 3/319 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + T    L     + +E+  +  +    + + +    A+L+   NPNDP+  Q +P  +E
Sbjct: 23  SFTDPAKLLQHLGLDEEKYAQHIKARRLFPMRVPRHFADLMEKGNPNDPLFLQVMPLSDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P   EDP+ + + +  KGI+H+Y  R+LL +   C V CR+CFRR    +     +
Sbjct: 83  FLTSPGYSEDPL-EEHDTAGKGILHKYDSRVLLMVRTGCAVNCRYCFRRHFPYA--DNAV 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S    E  L YIQ    I EVIF+GGDPL+     L  +   +  I HV+ LR H+R+P+
Sbjct: 140 SKHQWEEVLQYIQAHDNINEVIFSGGDPLMAKDDHLAWLANEIASINHVKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+RIN   +           + +HANH  E SE   + +  L   G+ LL+QSVLLKG
Sbjct: 200 VLPERINNAFVNWFTALPIQKVLVLHANHANEMSEALKSRLITLREKGVTLLNQSVLLKG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  E +++L     E  + PYYLH  D   G SHF ++ +EG+ I+    +++ G   
Sbjct: 260 VNDSGEAISDLSEALFEASVLPYYLHVLDKVQGASHFYVSDDEGRHIMEEAIKRLPGFLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P  + ++ G  GK  ID H
Sbjct: 320 PKLVREIGGQPGKTPIDLH 338


>gi|262401937|ref|ZP_06078502.1| lysine 2,3-aminomutase [Vibrio sp. RC586]
 gi|262351909|gb|EEZ01040.1| lysine 2,3-aminomutase [Vibrio sp. RC586]
          Length = 340

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 99/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E  + P    DP+ + N++ + G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI +  Q+ EVIF+GGDPLI     L  +++ +  I H++ LR H
Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLIAKDHELAWLIERIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++   +    + +  H NH  E + E    ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+N+  E    L  T  +  I PYYLH  D   G +HF ++ +E ++++  L E++
Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDEARQLMGGLIERV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGKPSKTPLDLH 338


>gi|212710982|ref|ZP_03319110.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM
           30120]
 gi|212686150|gb|EEB45678.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM
           30120]
          Length = 342

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 97/325 (29%), Positives = 166/325 (51%), Gaps = 4/325 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           Q   + +T+  +L     ++  Q   E  E    + + +     + +   +P DP+  Q 
Sbjct: 17  QQLAEAVTNPDELLQLLNLEDHQPSREGHEARKLFPLRVPHPFISRMKKGDPLDPLLLQV 76

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +  K E +I P    DP+ +   + +  ++H+Y +R L+ +   C V CR+CFRR     
Sbjct: 77  LTAKAEFDIHPGFSTDPL-EEQDNAIPSLLHKYRNRALMLVKGGCAVNCRYCFRRHFPY- 134

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +    +  +   A+ YI+  S++ E+IF+GGDPL+     L  ++  L  I H+  LR 
Sbjct: 135 -EDNKGNKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQLEEIPHITRLRI 193

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           HSR+P+V P+RI   L Q L ++   V +  H NH  E  +E   A+ +L  +G+ LL+Q
Sbjct: 194 HSRLPVVIPERITDTLCQRLTQSRLHVIMVTHVNHANEIDDEFAQAMLKLKRSGVTLLNQ 253

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL+ +ND+   LANL     ++ I PYYLH  D   G +HF ++  E ++++  L  +
Sbjct: 254 SVLLRQVNDNVTALANLSNALFDVGILPYYLHVLDKVQGAAHFLVSDLEARQLIRELLSQ 313

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325
           +SG   P    ++ G   K  +D +
Sbjct: 314 VSGYLVPKLAREIGGEPSKTLLDLN 338


>gi|110835306|ref|YP_694165.1| hypothetical protein ABO_2445 [Alcanivorax borkumensis SK2]
 gi|110648417|emb|CAL17893.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 363

 Score =  392 bits (1008), Expect = e-107,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 166/323 (51%), Gaps = 4/323 (1%)

Query: 1   MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +    +T   +L     +  E + +    +  + + +      L+   NP+DP+ RQ
Sbjct: 42  WQRQQADLITDPAELLAMLDLPVESLPDALSAATDFPLRVPRSYVALMERGNPHDPLLRQ 101

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +   +E+   P    DP+ +  H+ + G++H+Y  R LL +   C V+CR+CFRR    
Sbjct: 102 VLSVADEMVAQPGFSADPLDEAEHTAVPGLLHKYHGRALLVVTGACAVHCRYCFRRHFPY 161

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
               T LS K  + AL ++  +  I EVI +GGDPL LS++RL+++L  L  I H++ LR
Sbjct: 162 Q---THLSGKRWKQALEWLAARPDINEVILSGGDPLTLSNQRLEQLLDALESIPHLRRLR 218

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR P+V P+R+   L   L        + +H NHP E S   +     L +AGI LL+
Sbjct: 219 IHSRTPVVIPERLEVGLKALLTWRRWQTVLVLHGNHPREISPALVERCRDLRSAGITLLN 278

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL G+ND  + LA L     +  + PYYLH  D   G +HF ++ E  ++I A+L+ 
Sbjct: 279 QSVLLAGVNDRADTLAELSDRLFDAGVMPYYLHQLDAVQGAAHFAVSDEAAREIHAALRA 338

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++ G   P    + PG   K  +
Sbjct: 339 RLPGFLVPRLTREEPGEPAKTVL 361


>gi|153834930|ref|ZP_01987597.1| lysine 2;3-aminomutase [Vibrio harveyi HY01]
 gi|148868610|gb|EDL67696.1| lysine 2;3-aminomutase [Vibrio harveyi HY01]
          Length = 340

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 161/324 (49%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +       ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAKLLEMLEIDPSPWLDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  +      DP+ +   + L G++H+Y +R L+ +   C V CR+CFRR     +
Sbjct: 78  PLSEEFEVHEGYSNDPL-EEQDNELPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
             +    +     L Y+ ++ ++ EVIF+GGDPL+     +  +L+ +  I H++ LR H
Sbjct: 137 NKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAQIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL Q L+ +   + +  H NH  E + E  A +++L  AG+ LL+Q+
Sbjct: 195 SRLPVVIPARITDELCQLLRASRLQIVLVTHINHANEINAEFAAQMAKLKQAGVTLLNQA 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLK +N+  E    L     +  I PYYLH  D   G +H+ ++ EE + I+  +  ++
Sbjct: 255 VLLKNVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEAKAIMRGVITQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|301154946|emb|CBW14409.1| predicted lysine aminomutase [Haemophilus parainfluenzae T3T1]
          Length = 340

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 97/318 (30%), Positives = 151/318 (47%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L     +  E   E       +++ +       +   NP DP+  Q + 
Sbjct: 22  LKN-AISDPKILLKTLNLPVEDFAEDIAARKLFAMRVPLPFVEKMEKGNPKDPLFLQVMT 80

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
            ++E        +DP+ +   + +  I+H+Y +R+L      C V CR+CFRR     Q 
Sbjct: 81  AQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDQN 140

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               +    + A+ YI    +I EVIF+GGDP++        +L+ L  I H+Q LR HS
Sbjct: 141 PG--NKTSWQQAIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERLEKIPHLQRLRIHS 198

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V P+RI  E    L ++        H NHP E  EE   A+ +L  A + LL+QSV
Sbjct: 199 RLPVVIPERITDEFCDLLLKSPLQTVFVTHINHPNEIDEELALAMQKLVGAKVTLLNQSV 258

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLK +ND+P  L  L     +  I PYYLH  D   G SHF ++ E+  +I   L+   S
Sbjct: 259 LLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDEKALQIYKELQALTS 318

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 319 GYLVPKLAREIGGEPNKT 336


>gi|183221183|ref|YP_001839179.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
 gi|189911274|ref|YP_001962829.1| lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167775950|gb|ABZ94251.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167779605|gb|ABZ97903.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Paris)']
          Length = 402

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 115/331 (34%), Positives = 182/331 (54%), Gaps = 7/331 (2%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL+++     +DL    ++   +   I+       ++ TP   +L +P +PN PI R  +
Sbjct: 29  QLQNRV--KGEDLARYFVLSDSERVGIQNTIRLL-VSTTPYYLSLSDPSDPNCPIRRMIV 85

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P KEE     EE  DP+ +   SP++G+ H YP+R+LL   H C VYCR C R   V S 
Sbjct: 86  PTKEEAIFSLEESADPLEEERLSPVRGLTHMYPNRVLLFSNHSCSVYCRHCMRGRKVSSN 145

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +   +   D E+A  YI+   +I +V+ +GGDPL L+  R++ +LK L  I HV+I R  
Sbjct: 146 EE-RMEKSDLESAFDYIRNHPEIEDVVVSGGDPLNLADLRIEWILKELNQIPHVKICRLG 204

Query: 182 SRVPIVDPQRINPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           +R P+  P RI   + Q +++       ++     NHP E ++E   AI +L   G+ + 
Sbjct: 205 TRNPVTLPFRITDAICQIIEKYNDDNLSIFCNTQFNHPKECTKETKEAILKLLKVGVSVG 264

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKGINDD E +  L +  +E+R++ YYL+ P+L  G+  FR  +  G +IV  ++
Sbjct: 265 NQAVLLKGINDDEETMLTLHKKLLEMRVRAYYLYDPELIPGSRGFRTPLARGIEIVEYMR 324

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
            KI G+  P ++ DLPGG GK+ I  +    
Sbjct: 325 GKIGGMGIPQFVNDLPGGGGKITIGANWYLG 355


>gi|296535943|ref|ZP_06898093.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957]
 gi|296263737|gb|EFH10212.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957]
          Length = 683

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 152/347 (43%), Positives = 208/347 (59%), Gaps = 1/347 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           +L+ +TL  A  L  A L        ++ +   Y+IALTP +  LI+  +P DPIARQ++
Sbjct: 337 RLKPRTLRDAAALVEAGLAPASAQPALEALQQVYAIALTPAVQALIDRADPADPIARQYV 396

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   EL  LP ER DP  D   +P+KG+VHRYPDR LLK L  CPVYCRFCFRRE+VG  
Sbjct: 397 PDPAELVTLPRERSDPTSDAPFTPVKGVVHRYPDRALLKPLLACPVYCRFCFRREVVGPD 456

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
            G +LS  + EAAL +     Q+ E I TGGDPL+LS +RL  +L  L  I H+ I+R H
Sbjct: 457 GG-LLSEPELEAALDWFARTPQVREAILTGGDPLMLSPRRLAHILARLSSIPHLDIIRLH 515

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +RVP+  P+R+   L   L    K +++ +HANH  EFS  A  A++RL  AG+ LL QS
Sbjct: 516 TRVPVAAPERVTAALADTLAATDKALFLCVHANHAREFSAGARTALTRLRRAGVALLGQS 575

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+ND  + LA L R  +  ++KPYYLH  D A GT+ F + IE+G+ I+ +L+  +
Sbjct: 576 VLLRGVNDSADALAALFRAMLAAQVKPYYLHQLDRAPGTARFEVPIEQGRAILRALRGTL 635

Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           +GL  P Y+LDLPGG GK  +     +  G           +   +P
Sbjct: 636 TGLAWPAYVLDLPGGAGKAPLGPDFARAEGADWLVEGPLDGVAQRHP 682


>gi|116751432|ref|YP_848119.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116700496|gb|ABK19684.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB]
          Length = 360

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 122/336 (36%), Positives = 183/336 (54%), Gaps = 6/336 (1%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
            L   +         + E+   Y          LI      DP+ RQ +P   EL+    
Sbjct: 13  TLQALSRDPGADGAALSEVVRRYPFRTNEYYQGLIRQTG--DPLWRQVMPDAMELSDDAG 70

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
             +DP+ +   SP+  +VHRYP+R+L  + H C ++CRFC R+    S     ++ +   
Sbjct: 71  -LQDPLAEEALSPVPNLVHRYPNRVLWLVSHECALHCRFCTRKRRWSS--PLPMTGELLR 127

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
             L YI+E  Q+ +V+ +GGDPL+L   RL+ +L  LR+I HV +LR  +RVP   P+R+
Sbjct: 128 DGLRYIRENPQVNDVLLSGGDPLLLDPSRLETILGELRHIPHVAVLRIGTRVPCALPERV 187

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
             EL   L     P+++ IH NHP E +EE+  A + LA+AGI L SQ+VLL+ +NDD  
Sbjct: 188 TGELATMLARH-HPLFLNIHFNHPREITEESRRACALLADAGIPLGSQTVLLRDVNDDAH 246

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           +L  L +T + LR++PYYL   DL  GT+HFR  +  G +IVA L+ +ISG+  P  ++D
Sbjct: 247 VLGELFQTLLGLRVRPYYLMQMDLTRGTAHFRTPLSRGLEIVARLRNRISGMAVPQLVVD 306

Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
           LPGG GKV +  + I+ +G        +      YP
Sbjct: 307 LPGGLGKVPLVPNRIEHIGEDHVVFRSYQGAPCRYP 342


>gi|330991009|ref|ZP_08314963.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1]
 gi|329761830|gb|EGG78320.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1]
          Length = 359

 Score =  392 bits (1007), Expect = e-107,   Method: Composition-based stats.
 Identities = 148/342 (43%), Positives = 217/342 (63%), Gaps = 4/342 (1%)

Query: 5   HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
            +TL S  DL  A L+   Q+  +++++ HY+ A+ P  A+LI    P+DPI RQ IP  
Sbjct: 16  SRTLRSVTDLLAAGLVTPAQVPALEDVARHYATAIPPAFADLIET--PDDPIGRQVIPDG 73

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            E++    E  DPIGD+  SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG   G+
Sbjct: 74  AEIHTDTTEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGP-GGS 132

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
           VL     E AL +++  + I EV+ TGGDPL+LS +R++ +++ L  + H+  +R HSRV
Sbjct: 133 VLDDAALEHALDWLRTHTGIHEVVMTGGDPLMLSARRMRAIMQALEGMDHIHTIRIHSRV 192

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           P+ DP R++ E+   L E  + +++ +H NH  E + +A AAI R+    I +L QSVLL
Sbjct: 193 PVADPGRLDDEMADAL-ETTRSMWLVVHVNHARELTPQARAAIRRVQARAIPVLGQSVLL 251

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           +G+ND P+ L  L+R  V  RI+PYYLH  D A GT+ F + I EGQ+++ASL+ +++G+
Sbjct: 252 RGVNDTPQALEALLRAQVAARIRPYYLHQLDPAPGTARFHVPIREGQRLLASLRGRVTGI 311

Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346
             P Y+LD+PGG+GKV I    + +  +G+   T     +H 
Sbjct: 312 AWPTYVLDIPGGHGKVPIAPGYLHEGPDGTLHATAPDGTIHR 353


>gi|260770856|ref|ZP_05879785.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972]
 gi|260614093|gb|EEX39283.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972]
          Length = 340

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I  +      +    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAQLLQQLGIDPQPWQNGFDARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE ++ P   EDP+ + N++ + G++H+Y +R L+ +   C + CR+CFRR    + 
Sbjct: 78  PLSEEFDVHPGYSEDPLDEQNNA-VPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYAD 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                S    + +L YI  + ++ E+I +GGDPL+   + L  +++ +  I HV+ LR H
Sbjct: 137 NKG--SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERIGAISHVKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P R+  EL+  L      V +  H NH  E +      ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARVTDELVALLANTRLQVVLVTHINHANEINLALKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           V+LKG+ND       L  T  +  I PYY+H  D   G +HF ++  E + I++ L E++
Sbjct: 255 VMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSEAKAIMSGLLERV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPTLTREIGGRKSKTPLDLH 338


>gi|114327751|ref|YP_744908.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1]
 gi|114315925|gb|ABI61985.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1]
          Length = 362

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 150/340 (44%), Positives = 208/340 (61%), Gaps = 10/340 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           ++L S  DL  A LI  E    ++ ++  Y+IA+ P +  LI   + +DPI  Q IP   
Sbjct: 25  RSLRSLADLRRAGLIDDE--APLQAVAAQYAIAIPPAMQALI--TDRHDPIGLQVIPDPA 80

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E+   P E  DPIGD+  SP+ GIVHRYPDR LLK L +CPVYCRFCFRRE VG   G V
Sbjct: 81  EMITAPYENVDPIGDDALSPVPGIVHRYPDRALLKPLLICPVYCRFCFRREHVGPDGG-V 139

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           LS +    AL ++    QI EVI TGGDPL+LS +RL  ++  L  I H+ I+R HSRVP
Sbjct: 140 LSEEQLRIALDWLAGHPQIREVILTGGDPLMLSPRRLSFIINELNNIPHIDIIRIHSRVP 199

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           + DP  +   ++  L E  K +++ +H N+  E ++ A  +I      GI +LSQ+VLL+
Sbjct: 200 VADPALVTQAMLDAL-ETDKAMFLVLHTNNVKELTDLAALSIQSFQRRGIPVLSQTVLLR 258

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND  E L  L R  + LR+KPYYLH  D A GT+ FR+ +EEG+ I+ +L+ +ISGL 
Sbjct: 259 GVNDSAEALEALYRRILRLRVKPYYLHQLDAAPGTARFRVPVEEGRAILHALRGRISGLA 318

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
            P Y++D+PGGYGKV +D   ++  G     + D +   H
Sbjct: 319 WPTYVIDIPGGYGKVPVDPDYLESDG----SVRDINGHRH 354


>gi|156972506|ref|YP_001443413.1| lysine 2;3-aminomutase [Vibrio harveyi ATCC BAA-1116]
 gi|156524100|gb|ABU69186.1| hypothetical protein VIBHAR_00138 [Vibrio harveyi ATCC BAA-1116]
          Length = 340

 Score =  391 bits (1006), Expect = e-107,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 160/324 (49%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +       ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAKLLEMLEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  +      DP+ +   + L G++H+Y +R L+ +   C V CR+CFRR     +
Sbjct: 78  PLSEEFEVHEGYSNDPL-EEQDNELPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
             +    +     L Y+ ++ ++ EVIF+GGDPL+     +  +L+ +  I H++ LR H
Sbjct: 137 NKS--GKQAWIKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAQIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL Q L+ +   + +  H NH  E + E  A +++L  AG+ LL+Q 
Sbjct: 195 SRLPVVIPARITDELCQRLRASRLQIVLVTHINHANEINAEFAAQMAKLKQAGVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLK +N+  E    L     +  I PYY+H  D   G +H+ ++ EE + I+  +  ++
Sbjct: 255 VLLKDVNNSIEAQVALNEALFDAGILPYYVHVLDKVQGAAHYFVSDEEAKTIMRGVITRV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|332304891|ref|YP_004432742.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172220|gb|AEE21474.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 341

 Score =  391 bits (1005), Expect = e-106,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 4/326 (1%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +     T    L     +   +  +       + + +    A  +   NP+DP+ RQ
Sbjct: 16  WQKVLSSAFTDPLALLKYLALDPAKFTDDIAARRLFPMRVPAPFAKRMEKGNPDDPLFRQ 75

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
             P K+E N  P    DP+ + ++S   G++H+Y  R+LL +   C V CR+CFRR    
Sbjct: 76  VFPSKKEFNSDPNYLLDPLQEQSNSK-PGVLHKYQSRVLLLVRGGCAVNCRYCFRRHFPY 134

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           S     L+ ++ +  L YI++ S+I EVI++GGDPL+     L  + + +  I H++ +R
Sbjct: 135 S--DNHLNKQEWQETLDYIRQDSKINEVIYSGGDPLMAKDDFLAWLTEEIAQIDHIKRIR 192

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P RI PELI+   +      + +H NHP E  +     + +L  AG+ LL+
Sbjct: 193 IHTRLPVVIPSRITPELIKWFTQTRLKPIMVLHINHPQEIDQSLRDTLQKLTQAGVTLLN 252

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q VLLK IND  +    L  +  +  + PYYLH  D   G  HF    +  + I+A + +
Sbjct: 253 QGVLLKDINDSADAQVALSESLFDAGVLPYYLHVMDKVQGAQHFDHEDKIAKDIMAQMIK 312

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325
           ++ G   P  + ++ G  GK  ID +
Sbjct: 313 RLPGFLVPKLVREIGGQPGKTPIDLN 338


>gi|330444985|ref|ZP_08308639.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328493103|dbj|GAA03136.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 340

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/318 (30%), Positives = 156/318 (49%), Gaps = 3/318 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            ++    L     I     +        +++ +     + +   NP DP+ RQ +P  +E
Sbjct: 23  AISDPFTLLKLLKIDPTPWENGLAARKLFALRVPLSFVDKMEIGNPYDPLLRQILPLAQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +   + + G++H+Y +R+LL +   C V CR+CFRR    S      
Sbjct: 83  FEVHQGYSVDPL-EEQQNEIPGLLHKYHNRVLLIVKGGCAVNCRYCFRRHFPYSDNKG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + +  + +L YI    +I EVI +GGDPL+     LQ +++ +  I H++ LR HSR+P+
Sbjct: 140 NKRQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLIEHIAAIPHIKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L E      +  H NH  E  +    A+ +L  A + LL+Q VLLKG
Sbjct: 200 VIPNRITDALCQILTETRLQTILVTHINHANEIDDALKTAMQKLKQANVTLLNQGVLLKG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND    L +L  T  +  I+PYYLH  D   G +HF +  E  ++++A L  K+SG   
Sbjct: 260 VNDSVAALTDLSETLFDAGIQPYYLHVLDRVQGAAHFMVDDEIARQLMAGLITKVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PKLTREIGGRASKTPLDL 337


>gi|27364664|ref|NP_760192.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6]
 gi|27360809|gb|AAO09719.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6]
          Length = 340

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 101/324 (31%), Positives = 161/324 (49%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +       ++  +       +   NPNDP+ RQ +
Sbjct: 19  QLAN-GISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  I P    DP+ +   + + G++H+Y +R L+ +   C + CR+CFRR      
Sbjct: 78  PVSEEHEIHPGYSVDPL-EEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L YI + S + EVIF+GGDPL+     LQ +++ +  I H++ LR H
Sbjct: 135 QDNKGSKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERIADIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI   L Q L++    V +  H NH  E + E  + + RL   G+ LL+Q 
Sbjct: 195 SRLPVVIPARITTALCQLLEQTRLQVILVTHINHANEINAELTSQLHRLKRIGVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  E   +L     +  I PYYLH  D   G +HF ++ +E + I+  L  ++
Sbjct: 255 VLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQEAKAIMHGLITQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D +
Sbjct: 315 SGYLVPTLTREIGGRPSKTPLDLY 338


>gi|239994935|ref|ZP_04715459.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii
           ATCC 27126]
          Length = 341

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 102/319 (31%), Positives = 169/319 (52%), Gaps = 3/319 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + T    L     + +E+  +  +    + + +     +L+   NPNDP+  Q +P  +E
Sbjct: 23  SFTDPAKLLQHLGLDQEKYAQHIKARRLFPMRVPRHFVDLMEKENPNDPLFLQVMPLSDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P   EDP+ ++  +  KGI+H+Y  R+LL +   C V CR+CFRR    +     +
Sbjct: 83  FLTSPGYSEDPLDEH-DTAGKGILHKYDSRVLLMVRTGCAVNCRYCFRRHFPYA--DNAV 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S       L Y++  ++I EVIF+GGDPL+   + L  +   +  I H++ LR HSR+P+
Sbjct: 140 SKHQWLDVLEYLRSNNKINEVIFSGGDPLMAKDEHLSWLANEITTIPHIKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+RI+ + ++          + +HANH  E SE   + +  L   G+ LL+QSVLLKG
Sbjct: 200 VLPERISHDFVEWFTALPLQKVLVLHANHANEMSETLKSRLKTLRERGVTLLNQSVLLKG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + +++L  T  E  + PYYLH  D   G SHF ++ +EG++I+    +++ G   
Sbjct: 260 VNDSGDAISDLSETLFEAGVLPYYLHVLDKVQGASHFYVSDDEGREIMEEAIKRLPGFLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P  + ++ G  GK  ID H
Sbjct: 320 PKLVREIGGQPGKTPIDLH 338


>gi|304413330|ref|ZP_07394803.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1]
 gi|304284173|gb|EFL92566.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1]
          Length = 338

 Score =  391 bits (1004), Expect = e-106,   Method: Composition-based stats.
 Identities = 93/325 (28%), Positives = 156/325 (48%), Gaps = 14/325 (4%)

Query: 11  AQDLYNANLIKKE-----------QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q L N      E           ++ + K     + + +      L+   + NDP+ RQ
Sbjct: 16  LQQLANVITDPDELLQLLQLDTHPELPQGKSARRLFPLRVPRAFVALMRKGDANDPLLRQ 75

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +    E     +   DP+ +   +   G++H+Y +R LL +   C + CR+CFRR    
Sbjct: 76  VLTSSAEFISPEDFITDPLAEQR-TAAPGLLHKYGNRALLLVKGSCAINCRYCFRRHFPY 134

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                  + K+ + AL YI++  ++ E+IF+GGDPL+   + L  ++  L  I H++ LR
Sbjct: 135 QDNQG--NKKNWQLALDYIRQHPELDEIIFSGGDPLMAKDRELSWLIDALEKIAHIKRLR 192

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P RI   L Q    +   + +  H NH  E       ++++L   G+ LL+
Sbjct: 193 IHTRLPVVIPARITIALCQKFHASRLQIVLVTHINHANEIDNVLCDSMAKLKTKGVTLLN 252

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+G+ND+ E+LA L        I PYYLH  D   G +HF +  +E ++++  L  
Sbjct: 253 QSVLLRGVNDNVEVLAQLSNALFNAGILPYYLHVLDKVKGAAHFMVNDDEARRLINGLLG 312

Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
            ISG   P  + ++ G   K  +  
Sbjct: 313 CISGYLVPRLVREIAGEKSKTPLTL 337


>gi|260772045|ref|ZP_05880962.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14]
 gi|260612912|gb|EEX38114.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14]
          Length = 340

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 101/324 (31%), Positives = 160/324 (49%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++  + L     I         +    ++  +       +   NP+DP+ RQ +
Sbjct: 19  QLAN-GISDPEQLLTQLAIDPSPWQSGFKARALFAQRVPQSFVERMEKGNPHDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  +E  I P    DP+ + N+S   G++H+Y +R LL +   C + CR+CFRR      
Sbjct: 78  PLSDEFIIHPGYSTDPLEEQNNS-TPGLLHKYRNRCLLIVKGGCAINCRYCFRRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    +    + +L YI +  Q+ EVI +GGDPL+     L  +++ +  I H++ LR H
Sbjct: 135 QDNKGNKLVWQQSLDYIAQHRQLNEVILSGGDPLMAKDHELGWLIEQIAAIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL+    E    V +  H NH  E + E    ++RL    + LL+QS
Sbjct: 195 SRLPVVIPARITDELVSLCAETRLQVILVTHINHANEINAELSQQLARLRAEKVTLLNQS 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND       L     +  I PYYLH  D   G +HF ++ E+ + I+A L E++
Sbjct: 255 VLLKGVNDSVPAQVALSEALFDAGILPYYLHVLDKVQGAAHFYVSDEQARTIIAGLIEQV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338


>gi|85058286|ref|YP_453988.1| hypothetical protein SG0308 [Sodalis glossinidius str. 'morsitans']
 gi|84778806|dbj|BAE73583.1| conserved hypothetical protein [Sodalis glossinidius str.
           'morsitans']
          Length = 342

 Score =  390 bits (1002), Expect = e-106,   Method: Composition-based stats.
 Identities = 101/318 (31%), Positives = 160/318 (50%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T    L     ++    + E  E    +   +    A  +   +P+DP+ RQ I  +EE
Sbjct: 23  ITDPMQLLQLLRLEGHSGLREGAEARRLFPFRVPRAFAARMVTGDPDDPLLRQVITAREE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
            +  P    DP+ +  HS + G++H+Y +R L+ +   C V CR+CFRR     +     
Sbjct: 83  FDPTPGYSTDPLDEQ-HSVVPGLLHKYQNRALMLVKGGCAVNCRYCFRRHFPYQENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   A AYI++  ++ E+I +GGDPL+     L +++  L  I H++ LR HSR+P+
Sbjct: 140 NKTNWLRAAAYIRQHPELNEIILSGGDPLMAKDHELDELICLLEEIPHLKTLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L      V +  H NH  E       +++RL NA + LL+QSVLL+G
Sbjct: 200 VIPARITARLCQRLAGCRLKVVLVTHINHAREIDAALCDSMTRLRNARVTLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + LA L        I PYYLH  D   G +HF +  ++ ++I+  L EK+SG   
Sbjct: 260 VNDSADTLAALSEALFAAGILPYYLHVLDRVQGAAHFMVEDKQAREIMQQLLEKVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PRLAREIGGERSKTPLDL 337


>gi|262273034|ref|ZP_06050853.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886]
 gi|262222944|gb|EEY74250.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886]
          Length = 340

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 95/319 (29%), Positives = 162/319 (50%), Gaps = 3/319 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            ++  Q L     I+           N +   +     N +   NP+DP+ RQ +P  EE
Sbjct: 23  AVSDPQILLQQLDIEPSSWTSGFSARNLFVQRVPQSFINRMEKGNPDDPLLRQVLPVIEE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
            + +P    DP+ +   + + G++H+Y +R+L+ +   C + CR+CFRR      +    
Sbjct: 83  FDEVPGFSTDPL-EEQGNDVPGLLHKYKNRVLMIVKGGCAINCRYCFRRHFPY--QDNKG 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                  A+AY+Q+  ++ EVI +GGDPL+     LQ +++ +  + H++ LR H+R+P+
Sbjct: 140 GKSTWREAIAYLQQHPEVDEVILSGGDPLMAKDHELQWLIEAIESVPHIKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P R+   L   L  +   + +  H NH  E  +E  A ++ L +AG+ LL+Q VLL+G
Sbjct: 200 VIPSRVTVTLANMLATSRLNIVLVTHINHANEIDDELRAVMATLKHAGVTLLNQGVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  E L NL     +  I PYYLH  D   G +HF +  E  + +++ L +++SG   
Sbjct: 260 VNDSVEALKNLSNRLFDAGILPYYLHVLDKVKGAAHFLVDDETARNLMSGLIKEVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D H
Sbjct: 320 PRLTREIGGRDSKTPLDLH 338


>gi|315178899|gb|ADT85813.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218]
          Length = 340

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 94/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I  +      +    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAQLLQQLGIDPQPWQNGFDARKLFAQRVPQSFIDRMEKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE ++ P   EDP+ + N++ + G++H+Y +R L+ +   C + CR+CFRR    + 
Sbjct: 78  PLSEEFDVHPGYSEDPLDEQNNA-VPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYAD 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                S    + +L YI  + ++ E+I +GGDPL+   + L  +++ +  I H++ LR H
Sbjct: 137 NKG--SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERIGAISHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P R+  EL+  L      V +  H NH  E +      ++RL    + LL+Q 
Sbjct: 195 SRLPVVIPARVTDELVALLANTHLQVVLVTHINHANEINLALKQQMARLRAVNVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           V+LKG+ND       L  T  +  I PYY+H  D   G +HF ++  E + I++ L E++
Sbjct: 255 VMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSEAKAIMSGLLERV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPTLTREIGGRKSKTPLDLH 338


>gi|145636539|ref|ZP_01792207.1| thiamin transporter membrane protein [Haemophilus influenzae
           PittHH]
 gi|145270364|gb|EDK10299.1| thiamin transporter membrane protein [Haemophilus influenzae
           PittHH]
          Length = 338

 Score =  389 bits (1001), Expect = e-106,   Method: Composition-based stats.
 Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L  A  + ++  ++       +S+ +     + I   NP DP+  Q + 
Sbjct: 20  LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E         DP+ + N + +  I+H+Y +R+L      C V CR+CFRR     + 
Sbjct: 79  SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               + K  + AL YI    +I EVIF+GGDPL+     L  ++K L  I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V PQRI  E    L E+     +  H NHP E  +    A+ +L    + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++  E  +I  +L+   S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 317 GYLVPKLAREIAGEPNKT 334


>gi|310765349|gb|ADP10299.1| conserved uncharacterized protein [Erwinia sp. Ejp617]
          Length = 342

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 94/296 (31%), Positives = 153/296 (51%), Gaps = 3/296 (1%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           +    +++ +    A  +   +P DP+  Q I  ++E    P    DP+ + + S + G+
Sbjct: 46  DARRLFALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           +H+Y +R LL +   C V CR+CFRR     +     + ++ + AL YI+++ ++ E+IF
Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIF 162

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL+     L+ ++  L  I H++ LR HSR+P+V P+RI   L Q L ++     +
Sbjct: 163 SGGDPLMAKDHELEWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLM 222

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
             H NH  E  ++    +  L  AG+ LL+QSVLL+ IND    LA L     +  I PY
Sbjct: 223 VTHINHAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPY 282

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           YLH  D   G +HF ++ E  + IV  L   +SG   P    ++ G   K  +D  
Sbjct: 283 YLHVLDKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLDLQ 338


>gi|323495128|ref|ZP_08100214.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546]
 gi|323310629|gb|EGA63807.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546]
          Length = 340

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 93/324 (28%), Positives = 158/324 (48%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I         E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAKLLEQLEIDPTPWKNGFEARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  +      DP+ +  ++ + G++H+Y +R L+ +   C + CR+CFRR     +
Sbjct: 78  PLSEEFEVHQGYSNDPL-EEQNNAIPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYDE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                S    + +L YIQ+  +I E+I +GGDPL+     L  ++  +  I+H++ LR H
Sbjct: 137 NKG--SKSVWQTSLDYIQQHPEIDEIILSGGDPLMAKDDELSWLVARIADIQHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  +L   L +    V +  H NH  E  +    A+ +L   G+ LL+Q 
Sbjct: 195 SRLPVVIPARITEQLTDLLGQTRLQVILVTHINHAQEIDQTLANALDKLKQVGVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           V+LKG+ND       L     E  + PYY+H  D   G +HF ++ ++ ++I+A + E+ 
Sbjct: 255 VMLKGVNDSVSSQIALSNALFEAGVLPYYMHVLDKVQGAAHFFISDQQAKEIMAGVLEQT 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRASKTPLDLH 338


>gi|259907161|ref|YP_002647517.1| hypothetical protein EpC_04800 [Erwinia pyrifoliae Ep1/96]
 gi|224962783|emb|CAX54238.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96]
 gi|283476968|emb|CAY72852.1| Uncharacterized kamA family protein TP_0121 [Erwinia pyrifoliae DSM
           12163]
          Length = 342

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 94/296 (31%), Positives = 152/296 (51%), Gaps = 3/296 (1%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           +    +++ +    A  +   +P DP+  Q I  ++E    P    DP+ + + S + G+
Sbjct: 46  DARRLFALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           +H+Y +R LL +   C V CR+CFRR     +     + ++ + AL YI+++ ++ E+IF
Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIF 162

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL+     L  ++  L  I H++ LR HSR+P+V P+RI   L Q L ++     +
Sbjct: 163 SGGDPLMAKDHELDWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLM 222

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
             H NH  E  ++    +  L  AG+ LL+QSVLL+ IND    LA L     +  I PY
Sbjct: 223 VTHINHAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPY 282

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           YLH  D   G +HF ++ E  + IV  L   +SG   P    ++ G   K  +D  
Sbjct: 283 YLHVLDKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLDLQ 338


>gi|238793387|ref|ZP_04637013.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC
           29909]
 gi|238727356|gb|EEQ18884.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC
           29909]
          Length = 335

 Score =  389 bits (1000), Expect = e-106,   Method: Composition-based stats.
 Identities = 97/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +   + +  E    + + +       +   +P+DP+  Q +  +EE
Sbjct: 15  ITDPAELLRILSLNEHPNLQQGIEARRLFPLRVPRAFVARMRLGDPSDPLLLQVLTAREE 74

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 75  FIAAPGFTTDPLDEQR-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  +L  L  I H++ LR H+R+P+
Sbjct: 132 NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDELENIAHIKRLRIHTRLPV 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L +    V +  H NH  E  +    ++++L  AG+ LL+QSVLL+G
Sbjct: 192 VIPDRITAALCQRLGDTRLQVLMVTHINHANEIDQPLRDSMAQLKRAGVTLLNQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD E+LA L     +  I PYY+H  D   G +HF +  +E + ++  L  ++SG   
Sbjct: 252 INDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARLLMKGLLCRVSGYLV 311

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 312 PRLAREIGGELSKTPLDL 329


>gi|42524711|ref|NP_970091.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100]
 gi|39576921|emb|CAE78150.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100]
          Length = 428

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 116/347 (33%), Positives = 191/347 (55%), Gaps = 4/347 (1%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            QLRH +L +  D      +  ++          +++  TP  A+L    +    I +  
Sbjct: 53  WQLRH-SLKTQDDFAQHFELSADEKAAFVGGKELFNVRTTPYYASLA-KGDAGQSIRQIL 110

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P + E+    ++  DP+G+  +     ++HRY DR+L  +  +C VYCRFC R+   G 
Sbjct: 111 MPHRFEIEEGDQQMLDPLGERQNKAAPRLIHRYSDRVLFLITDICSVYCRFCTRKHFTGQ 170

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           ++  + + ++ E AL+YI+  + I EVI +GGDPL +S K+L +VL  LR I+HV+I+R 
Sbjct: 171 EQAFIRN-EEYEQALSYIRSHTGIREVILSGGDPLTVSDKQLDRVLGDLRAIEHVEIIRI 229

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            SR+P+V P R+  +L+Q LK+  KPV++  H NHP E + EA+ A+ RL + G+ +++Q
Sbjct: 230 GSRMPVVCPMRVTEDLVQILKKH-KPVFLMSHFNHPDELTAEAVEALERLVDNGVPVMNQ 288

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            VLL GIN+ P ++  L R  + LR+KPYY+   D + GT H R ++E+  +I   L   
Sbjct: 289 MVLLNGINNHPALVQALNRRLLFLRVKPYYMFQCDPSLGTDHLRTSVEDSLEIQKELWGH 348

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           +SGL  P   LD+P G GK  +  +        +        +  +Y
Sbjct: 349 LSGLAMPNLSLDIPNGGGKTYLVPNFEVGQEGRTRHYVGWDGVKAEY 395


>gi|254784867|ref|YP_003072295.1| KamA family protein [Teredinibacter turnerae T7901]
 gi|237684557|gb|ACR11821.1| KamA family protein [Teredinibacter turnerae T7901]
          Length = 335

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 102/321 (31%), Positives = 168/321 (52%), Gaps = 3/321 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL ++ +T   DL +   +  + +   +  +  + + ++    + + P +PNDP+  Q +
Sbjct: 17  QLTNQ-ITKPADLLSRLSLDNQWLPAAERAAALFPLRVSEAFVSRMRPGDPNDPLLLQVL 75

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  + P   EDP+ +   +P  G++H+Y  R+LL     C + CR+CFRR      
Sbjct: 76  PLGEEFAVTPGYSEDPLEEEKSNPAPGLIHKYHGRVLLIAAPHCAINCRYCFRRHF--DY 133

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S  + +AALAYI+ + +I EVI +GGDPL+L  K+L+ +L  +  I H+  +R H
Sbjct: 134 RQNTPSRTEWQAALAYIKTRPEIDEVILSGGDPLMLGDKQLRWLLTEIDAIPHITRIRIH 193

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P R    L++ L      + +  H NH  E  +   A    L  AGI LL+Q+
Sbjct: 194 SRLPVVLPDRFTSTLLELLSATRAQMVVVAHCNHSQEIDQSVEAVFEALKQAGITLLNQT 253

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLK IND   IL  L +   +  + PYYLH  D  +GT+H+ +   + +++   L  ++
Sbjct: 254 VLLKNINDSANILIELSKRLFQSGVLPYYLHLLDRVSGTAHYEVDELDARRLREELLAQL 313

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
            G   P  + + PG   K  I
Sbjct: 314 PGYLVPTLVKEEPGAPSKTPI 334


>gi|269103626|ref|ZP_06156323.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP
           102761]
 gi|268163524|gb|EEZ42020.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP
           102761]
          Length = 340

 Score =  389 bits (999), Expect = e-106,   Method: Composition-based stats.
 Identities = 94/319 (29%), Positives = 157/319 (49%), Gaps = 3/319 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            ++    L N   I     ++       +++ +       +   NP DP+ RQ +P ++E
Sbjct: 23  AISDPLKLLNLLKIDPTPWEKGLAARKLFALRVPMSFVERMEVGNPYDPLLRQVLPLEQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +   + + G++H+Y +R+L+ +   C + CR+CFRR      +    
Sbjct: 83  FEVHAGYSTDPL-EEQDNDIPGLLHKYKNRVLMIVKGGCAINCRYCFRRHFPY--QDNKG 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S    + +L YI    ++ EVI +GGDPL+     L  ++  +  I H++ LR HSR+P+
Sbjct: 140 SKSVWQQSLDYIANHPELDEVILSGGDPLMAKDHELAWLMDGIEQIPHIKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P R+ P+L Q    +   V +  H NH  E + E   A+  L +A + LL+Q VLLKG
Sbjct: 200 VLPSRVTPDLCQRFASSRLQVILVTHINHCNEINAELTLAMQNLKHANVTLLNQGVLLKG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + L NL     +  I PYYLH  D   G +HF +   + + ++A L E +SG   
Sbjct: 260 VNDSVQALINLSNRLFDAGILPYYLHVLDKVQGAAHFFVDDIQAKTLMAGLMENVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D H
Sbjct: 320 PQLTREIGGRSSKTPLDLH 338


>gi|90581266|ref|ZP_01237063.1| hypothetical protein VAS14_18921 [Vibrio angustum S14]
 gi|90437505|gb|EAS62699.1| hypothetical protein VAS14_18921 [Vibrio angustum S14]
          Length = 340

 Score =  388 bits (998), Expect = e-106,   Method: Composition-based stats.
 Identities = 96/318 (30%), Positives = 158/318 (49%), Gaps = 3/318 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            ++    L     I     +        +++ +     + +   NP+DP+ RQ +P ++E
Sbjct: 23  AISDPFQLLKLLKIDPTPWENGLAARKLFALRVPLSFVDKMEIGNPHDPLLRQILPLEQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +   + + G++H+Y +R+LL +   C V CR+CFRR    S      
Sbjct: 83  FEVHQGYSVDPL-EEQQNDIPGLLHKYHNRVLLIVKGGCAVNCRYCFRRHFPYSDNKG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +    + +LAYI    +I EVI +GGDPL+     LQ +++ +  I H++ LR HSR+P+
Sbjct: 140 NKHQWQQSLAYIAAHPEINEVILSGGDPLMAKDHELQWLVEHIAAIPHIKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L E      +  H NH  E  +    A+ +L  A + LL+Q VLLKG
Sbjct: 200 VIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMQKLKQANVTLLNQGVLLKG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND  + L +L     +  I+PYYLH  D   G +H+ +  E  ++++A L  ++SG   
Sbjct: 260 INDSVKTLTDLSEALFDAGIQPYYLHVLDRVQGAAHYMVDDETARQLMAGLITQVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PKLTREIGGRASKTPLDL 337


>gi|163802718|ref|ZP_02196608.1| chaperonin GroEL [Vibrio sp. AND4]
 gi|159173425|gb|EDP58247.1| chaperonin GroEL [Vibrio sp. AND4]
          Length = 340

 Score =  388 bits (997), Expect = e-106,   Method: Composition-based stats.
 Identities = 88/324 (27%), Positives = 162/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++  + L     I      +       +S+ +       +   NP+DP+ RQ +
Sbjct: 19  QLSN-AISDPRKLLEVLEIDPTPWQKGFAARELFSLRVPLSFVERMEKGNPHDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  +      DP+ +  ++ + G++H+Y +R L+ +   C + CR+CF R      
Sbjct: 78  PLSEEFEVHQGYSADPLDEQGNA-IPGLLHKYKNRALMIVKGGCAINCRYCFSRHFPY-- 134

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    S    + +L Y+ +  +I EVI +GGDPL+     ++ +++ + +I H++ LR H
Sbjct: 135 QDNKGSKSVWQTSLDYVSQHPEINEVILSGGDPLMAKDSEIEWLIQAIEHIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  +L   L+ +   + +  H NH  E + E  A +++L   G+ LL+Q+
Sbjct: 195 SRLPVVIPARITDQLSHLLQASRLQIVLVTHINHADEINAELTAKMAKLKQVGVTLLNQA 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLK +ND  E    L     +  I PYYLH  D   G +H+ ++  + ++I+  +  ++
Sbjct: 255 VLLKDVNDSVEAQVTLNEALFDAGILPYYLHVLDKVQGAAHYFVSDTQAKEIMRGVITRV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D +
Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLN 338


>gi|148825389|ref|YP_001290142.1| DNA repair protein RecO [Haemophilus influenzae PittEE]
 gi|229846415|ref|ZP_04466523.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1]
 gi|148715549|gb|ABQ97759.1| DNA repair protein RecO [Haemophilus influenzae PittEE]
 gi|229810508|gb|EEP46226.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1]
 gi|309972513|gb|ADO95714.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
          Length = 338

 Score =  387 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L  A  + ++  ++       +S+ +     + I   NP DP+  Q + 
Sbjct: 20  LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E         DP+ + N + +  I+H+Y +R+L      C V CR+CFRR     + 
Sbjct: 79  SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               + K  + AL YI    +I EVIF+GGDPL+     L  ++K L  I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V PQRI  E    L E+     +  H NHP E  +    A+ +L    + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++  E  +I  +L+   S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 317 GYLVPKLAREIAGEPNKT 334


>gi|323498137|ref|ZP_08103141.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326]
 gi|323316848|gb|EGA69855.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326]
          Length = 340

 Score =  387 bits (996), Expect = e-105,   Method: Composition-based stats.
 Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I      +  E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAKLLEQLEIDPTPWQQGFEARQLFAQRVPQSFVDRMEKGNPFDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE ++      DP+ +   + + G++H+Y +R L+ +   C + CR+CFRR     +
Sbjct: 78  PLSEEFDVKQGYSNDPLLEQ-DNAIPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYQE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                S    + +L Y+Q++ +I EVI +GGDPL+     L+ +++ +  IKH++ +R H
Sbjct: 137 NKG--SKAVWQQSLDYVQQQPEINEVILSGGDPLMAKDDELRWLVERIADIKHIKRIRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI  EL++        V +  H NH  E + E   A +RL  AGI LL+Q 
Sbjct: 195 SRLPVVIPARITDELLEIFSTTRLQVVMVTHVNHAQEINHELRLATARLKLAGITLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           V+LKG+ND  E    L     +  I PYY+H  D   G +HF ++  E ++I+A L E++
Sbjct: 255 VMLKGVNDSIEAQVALSEALFDANILPYYIHVLDKVQGAAHFYISDHEAKRIMAGLLERV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPTLTREIGGRSSKTPLDLH 338


>gi|268323654|emb|CBH37242.1| hypothetical protein, radical SAM family [uncultured archaeon]
          Length = 515

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 121/317 (38%), Positives = 180/317 (56%), Gaps = 7/317 (2%)

Query: 9   TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68
            S  ++   +L    + D  K ++  Y + + P   +LI      D I +Q +P   EL 
Sbjct: 14  ESVANMRQLSLYYPVEKDAAK-VTRKYPMRINPYYLSLIKER--EDAIWKQSMPDIMELE 70

Query: 69  ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
              E   DP+ ++  SP+ G+VHRYPDR+LL + + C +YCRFC R+  VG     +   
Sbjct: 71  D-EEGVPDPLHEDKDSPVSGLVHRYPDRVLLLVSNRCAMYCRFCTRKRKVGDPFKRI-KK 128

Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
           +     + YI+E   I +V+ +GGDPL+L+ + L   L+ L+ IKHV +LR  +RVP   
Sbjct: 129 EQVLQGIEYIREHEAIRDVLISGGDPLLLNDEELAFFLERLKEIKHVDVLRIGTRVPCAL 188

Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
           PQRI   L+  L+    P+YI  H NHP EF+EE+  A S +A+AGI L  Q+VLLKG+N
Sbjct: 189 PQRITDGLLSLLRRY-HPLYINTHFNHPGEFTEESRRACSMIADAGIPLGDQTVLLKGVN 247

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           D  +++  L+R    +R+ PYY++  DL  GT HFR  ++EG +I   LK   S L  P 
Sbjct: 248 DSVDVMNALIRGLWSMRVTPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPH 306

Query: 309 YILDLPGGYGKVKIDTH 325
           +++D PGG GK+ I   
Sbjct: 307 FVIDAPGGGGKIPITPE 323



 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 18/151 (11%)

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
           + LK+   P+YI +H  HP E +E+    +S  ++AG+ L  +  L++G+NDDP+++  L
Sbjct: 380 ELLKQY-HPIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPKVIKEL 438

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
           +   ++LR+KPYYLH  D          + EEG  I+ SL+   SG+  P  I+      
Sbjct: 439 VHGLLKLRVKPYYLH-AD----------SEEEGLTIINSLRGFTSGMAVPHLIV-----G 482

Query: 318 GKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            K+ I  + I +  +    + ++  +  +YP
Sbjct: 483 DKI-ICPNYIVEKTSEKIMLKNYQGMTFEYP 512


>gi|238757499|ref|ZP_04618684.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC
           35236]
 gi|238704261|gb|EEP96793.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC
           35236]
          Length = 284

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 93/286 (32%), Positives = 153/286 (53%), Gaps = 3/286 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P NP+DP+  Q +  +EE    P    DP+ +   S + G++H+Y +R LL +   C 
Sbjct: 1   MQPGNPSDPLLLQVLTAQEEFITAPGFTTDPLDEQR-SVVPGLLHKYRNRALLLVKSGCA 59

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V CR+CFRR           +  +   AL YI++  ++ E+IF+GGDPL+ +   L  +L
Sbjct: 60  VNCRYCFRRHFPYQDNQG--NKANWRQALDYIRQHPELDEIIFSGGDPLMANDSELSWLL 117

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
             +  I H++ LR H+R+P+V P RI   L Q L  +   V +  H NH  E  +    +
Sbjct: 118 DEIESISHIKRLRIHTRLPVVIPARITANLCQRLSNSRLQVLMVTHINHANEIDQSLRNS 177

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           +++L  AG+ LL+QSVLL+G+N+D ++LA L     +  I PYY+H  D   G +HF + 
Sbjct: 178 MAQLKRAGVTLLNQSVLLRGVNNDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMVD 237

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
            +E ++++  L  ++SG   P    ++ G   K  +D   I+    
Sbjct: 238 DDEARQLMKGLLSRVSGYLVPRLTREIGGEPSKTPLDLRLIQSESQ 283


>gi|268323533|emb|CBH37121.1| putative L-lysine 2,3-aminomutase [uncultured archaeon]
          Length = 515

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 121/317 (38%), Positives = 181/317 (57%), Gaps = 7/317 (2%)

Query: 9   TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68
            S  ++   +L    + D  K ++  Y + + P   +LI      D I +Q +P   EL 
Sbjct: 14  ESVANMRQLSLYYPVEKDAAK-VTRKYPMRINPYYLSLIKER--EDAIWKQSMPDIMELE 70

Query: 69  ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
              E   DP+ +   SP+ G+VHRYPDR+LL + + C +YCRFC R+  VG     +   
Sbjct: 71  D-EEGVPDPLHEEKDSPVSGLVHRYPDRVLLLVSNRCAMYCRFCTRKRRVGDPFKRI-KK 128

Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
           +     + YI+E+ +I +V+ +GGDPL+L+   L   L+ L+ IKHV++LR  +RVP   
Sbjct: 129 EQVLQGIEYIREREEIRDVLISGGDPLLLNDDELAFFLERLKKIKHVEVLRIGTRVPCAL 188

Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
           PQRI   L+  L+    P+YI  H NHP EF+EE+  A S +A+AGI L  Q+VLLKG+N
Sbjct: 189 PQRITDALLSLLRRY-HPLYINTHFNHPGEFTEESRKACSMIADAGIPLGDQTVLLKGVN 247

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           D  +++  L+R    +R+ PYY++  DL  GT HFR  ++EG +I   LK   S L  P 
Sbjct: 248 DSVDVMNALIRGLWSMRVTPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPH 306

Query: 309 YILDLPGGYGKVKIDTH 325
           +++D PGG GK+ I   
Sbjct: 307 FVIDAPGGGGKIPITPE 323



 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 18/151 (11%)

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
           + LK+   P+YI +H  HP E +E+    +S  ++AG+ L  +  L++G+NDDP ++  L
Sbjct: 380 ELLKQY-HPIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPRVIKEL 438

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
           +   ++LR+KPYYLH  D          + EEG  I+ SL+   SG+  P  I+      
Sbjct: 439 VHGLLKLRVKPYYLH-AD----------SEEEGLTIINSLRGFTSGMAVPHLIV-----G 482

Query: 318 GKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
            K+ I  ++I +  +    + ++  +  +YP
Sbjct: 483 DKI-ICPNHIVEKTSEKIMLKNYQGMTFEYP 512


>gi|319782550|ref|YP_004142026.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
 gi|317168438|gb|ADV11976.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri
           biovar biserrulae WSM1271]
          Length = 370

 Score =  387 bits (995), Expect = e-105,   Method: Composition-based stats.
 Identities = 133/349 (38%), Positives = 192/349 (55%), Gaps = 5/349 (1%)

Query: 1   MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q   +  +   +DL     +   +    +  + ++ +       +LI+ ++P DPI  Q
Sbjct: 19  WQADVRAGVRHVRDLDRL-PLSSAERAAAQAAAANHKVRAPKAYLDLIDWNDPADPIRAQ 77

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            IP  +EL     E +DPI D++ SP+  + HR+ DR+LL   + C VYCRFCFR+E + 
Sbjct: 78  VIPSPQELEEAEGELDDPIADHDFSPVPRLTHRHADRVLLFPTYQCAVYCRFCFRKESLT 137

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           S  G   + +  E ALAYI +  +I EVI TGGDPL L  K L ++   +  I HV++LR
Sbjct: 138 S-IGRGYTREALEPALAYIADHPEIREVILTGGDPLSLPEKALAEIRARIEAIAHVRLLR 196

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+RVP+  P RI P L+  L +    V I  H NH  E ++    A   L  AG +LL+
Sbjct: 197 IHTRVPVALPSRITPGLVAAL-QGRLMVTIVTHFNHAREITQATETACRTLRQAGFVLLN 255

Query: 240 QSVLLKGINDDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           QSVLLKG+ND  E L  L R     L +KPYYLHH DLA G +H R TI +GQ +  +L+
Sbjct: 256 QSVLLKGVNDSVEALEELCRELMYRLGVKPYYLHHGDLARGMAHRRTTIAQGQALAEALR 315

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            ++SG+C P Y+LDLP G GKV I   +++     ++ +      V  Y
Sbjct: 316 ARLSGICNPVYVLDLPEGGGKVPIGPCHVEGRDGENWRLRGLDGEVRAY 364


>gi|307544317|ref|YP_003896796.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581]
 gi|307216341|emb|CBV41611.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581]
          Length = 572

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 100/323 (30%), Positives = 163/323 (50%), Gaps = 3/323 (0%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +    +   ++L     ++K      +     + + +       I P +P+DP+ RQ
Sbjct: 252 WQTQLSGAIRDPRELCRRLGLEKRWWPGAETGHALFEVRVPEAYLARIRPGDPHDPLLRQ 311

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P  EE +  P    DP+ +  H+P +G++H+Y  R+LL     C + CR+CFRR    
Sbjct: 312 VLPLDEESHSTPGFVTDPLEEREHTPRRGLIHKYAGRVLLIASPACAINCRYCFRRHFPY 371

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            +     S       L Y++  + I E I +GGDPL  + ++L  +++ L  I H++ LR
Sbjct: 372 DEN--APSRAQWADTLDYLRGDASIREAILSGGDPLAANDRQLGWLVEQLEAIPHLKRLR 429

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P RI+  L+  L        + +H NHP E  E  I A  RL +AG+ LL+
Sbjct: 430 IHTRLPVVIPDRIDGALLDWLGRTRLQKVVVLHINHPNEIDEAVIDACRRLRDAGVTLLN 489

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL GINDD + L  L     E  + PYYLH  D   G +HF +  +  + +V +++ 
Sbjct: 490 QSVLLAGINDDVDTLTALSERLFEADVLPYYLHVLDPVDGAAHFEIDDDTARTLVDAMRR 549

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++ G   P  + ++PG   K  I
Sbjct: 550 ELPGFLMPTLVREIPGEASKTPI 572


>gi|145634674|ref|ZP_01790383.1| DNA repair protein RecO [Haemophilus influenzae PittAA]
 gi|145268219|gb|EDK08214.1| DNA repair protein RecO [Haemophilus influenzae PittAA]
          Length = 338

 Score =  387 bits (994), Expect = e-105,   Method: Composition-based stats.
 Identities = 103/318 (32%), Positives = 157/318 (49%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L  A  + ++  ++       +S+ +     + I   NP DP+  Q + 
Sbjct: 20  LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E         DP+ + N + +  I+H+Y +R+L      C V CR+CFRR     + 
Sbjct: 79  SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               + K  + AL YI   S+I EVIF+GGDPL+     L  ++K L  I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V PQRI  E    L E+     +  H NHP E  +    A+ +L    + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANAMQKLNAVNVTLLNQSV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++  E  +I  +L+   S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 317 GYLVPKLAREIAGEPNKT 334


>gi|319896657|ref|YP_004134850.1| lysine 2,3-aminomutase [Haemophilus influenzae F3031]
 gi|317432159|emb|CBY80510.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3031]
          Length = 338

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 100/318 (31%), Positives = 153/318 (48%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++    L  A  + ++  ++       + + +     + +   NP DP+  Q + 
Sbjct: 20  LKN-AISDPTLLLKALNLPEDDFEQSIAARKLFPLRVPQPFIDKMEKGNPQDPLFLQVMC 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E         DP+ + N +    I+H+Y +R+L      C V CR+CFRR     + 
Sbjct: 79  SDLEFVQAEGFSTDPLEEKNANAAPNILHKYQNRLLFMTKGGCAVNCRYCFRRHFPYDEN 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               + K  + AL YI   S+I EVIF+GGDPL+     L  ++K L  I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V PQRI  E    L E      +  H NHP E  +    A+ +L    + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNAMQKLNTVNVTLLNQSV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LL+G+NDD +IL  L     +  I PYYLH  D   G SHF ++  E  +I  +L+   S
Sbjct: 257 LLRGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 317 GYLVPKLAREIAGEPNKT 334


>gi|240949712|ref|ZP_04754047.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305]
 gi|240295970|gb|EER46646.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305]
          Length = 333

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 4/321 (1%)

Query: 1   MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            QL   +       L     +  ++ ++       +++ +    A  +   + NDP+  Q
Sbjct: 13  WQLDLAQAFNDPVALLEYLELNPQEFEQAILARKLFAMRVPRPFAERMQKGDKNDPLFLQ 72

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +    E   +    +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CFRR    
Sbjct: 73  AMTSSAEFTQVEGFTKDPLDEQ-HSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPY 131

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +         + +L YI E  +I EVI +GGDPL+   + L  +L  L  I HV+ LR
Sbjct: 132 --EDVKSGKSAWQQSLQYIAEHPEIEEVILSGGDPLMAKDEELDWILTALEKITHVKTLR 189

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P RI  +L     ++   V +  H NH  E        I++L  A +ILL+
Sbjct: 190 IHTRLPVVIPNRITAQLCLRFADSRLNVVMVTHINHANEIDAVLANKIAKLKQADVILLN 249

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLKG+ND    L  L      + I PYYLH  D   G SHF +  E    I   L++
Sbjct: 250 QSVLLKGVNDSAITLKVLSDKLFSIGILPYYLHLLDKVEGASHFFVEDEIAFSIYKELQK 309

Query: 300 KISGLCQPFYILDLPGGYGKV 320
             SG   P    ++     K 
Sbjct: 310 ISSGYLVPKLAREIAKEPNKT 330


>gi|16272281|ref|NP_438493.1| hypothetical protein HI0329 [Haemophilus influenzae Rd KW20]
 gi|68248934|ref|YP_248046.1| lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP]
 gi|260581205|ref|ZP_05849024.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW]
 gi|260582577|ref|ZP_05850367.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127]
 gi|319775807|ref|YP_004138295.1| lysine 2,3-aminomutase [Haemophilus influenzae F3047]
 gi|1176350|sp|P44641|Y329_HAEIN RecName: Full=Uncharacterized KamA family protein HI_0329
 gi|1573296|gb|AAC21990.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
 gi|68057133|gb|AAX87386.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP]
 gi|260092130|gb|EEW76074.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW]
 gi|260094388|gb|EEW78286.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127]
 gi|317450398|emb|CBY86614.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3047]
          Length = 338

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L  A  + ++  ++       +S+ +     + I   NP DP+  Q + 
Sbjct: 20  LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E         DP+ + N + +  I+H+Y +R+L      C V CR+CFRR     + 
Sbjct: 79  SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               + K  + AL YI   S+I EVIF+GGDPL+     L  ++K L  I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V PQRI  E    L E      +  H NHP E  +    A+ +L    + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++  E  +I  +L+   S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 317 GYLVPKLAREIAGEPNKT 334


>gi|301169034|emb|CBW28631.1| predicted lysine aminomutase [Haemophilus influenzae 10810]
          Length = 338

 Score =  386 bits (993), Expect = e-105,   Method: Composition-based stats.
 Identities = 102/318 (32%), Positives = 155/318 (48%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L  A  + ++  ++       +S+ +     + I   NP DP+  Q + 
Sbjct: 20  LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E         DP+ + N + +  I+H+Y +R+L      C V CR+CFRR     + 
Sbjct: 79  SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               + K  + AL YI    +I EVIF+GGDPL+     L  ++K L  I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V PQRI  E    L E      +  H NHP E  +    A+ +L    + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++  E  +I  +L+   S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 317 GYLVPKLAREIAGEPNKT 334


>gi|145638760|ref|ZP_01794369.1| DNA repair protein RecO [Haemophilus influenzae PittII]
 gi|145272355|gb|EDK12263.1| DNA repair protein RecO [Haemophilus influenzae PittII]
 gi|309750250|gb|ADO80234.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
          Length = 338

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 103/318 (32%), Positives = 155/318 (48%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L  A  + K+  ++       +S+ +     + I   NP DP+  Q + 
Sbjct: 20  LKN-AISDPKLLLKALNLPKDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E         DP+ + N + +  I+H+Y +R+L      C V CR+CFRR     + 
Sbjct: 79  SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               + K  + AL YI    +I EVIF+GGDPL+     L  ++K L  I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V PQRI  E    L E      +  H NHP E  +    A+ +L    + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++  E  +I  +L+   S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 317 GYLVPKLAREIAGEPNKT 334


>gi|145632578|ref|ZP_01788312.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655]
 gi|144986773|gb|EDJ93325.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655]
          Length = 338

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L  A  + ++  ++       +S+ +     + I   NP DP+  Q + 
Sbjct: 20  LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E         DP+ + N + +  I+H+Y +R+L      C V CR+CFRR     + 
Sbjct: 79  SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               + K  + AL YI   S+I EVIF+GGDPL+     L  ++K L  I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V PQRI  E    L E      +  H NHP E  +    A+ +L    + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETPLQKVMVTHINHPNEIDQVFTNAMQKLNAVNVTLLNQSV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++  E  +I  +L+   S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 317 GYLVPKLAREIAGEPNKT 334


>gi|292489640|ref|YP_003532530.1| kamA family protein [Erwinia amylovora CFBP1430]
 gi|292898145|ref|YP_003537514.1| hypothetical protein EAM_0421 [Erwinia amylovora ATCC 49946]
 gi|291197993|emb|CBJ45095.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
 gi|291555077|emb|CBA23181.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora
           CFBP1430]
 gi|312173816|emb|CBX82070.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora ATCC
           BAA-2158]
          Length = 342

 Score =  386 bits (992), Expect = e-105,   Method: Composition-based stats.
 Identities = 94/296 (31%), Positives = 151/296 (51%), Gaps = 3/296 (1%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           +    +++ +    A  +   +P DP+  Q I  ++E    P    DP+ + + S + G+
Sbjct: 46  DARRLFALRVPKAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           +H+Y +R LL +   C V CR+CFRR     +     + ++ + AL YI+++ ++ E+I 
Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIL 162

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL+     L  ++  L  I H++ LR HSR+P+V P+RI   L Q L +      +
Sbjct: 163 SGGDPLMAKDHELDWLIGQLEQIPHLRRLRIHSRLPVVIPKRITEALCQRLAQTRLQTLM 222

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
             H NH  E  E+    +  L  AG+ LL+QSVLL+ IND   +LA L     +  I PY
Sbjct: 223 VTHINHAQEIDEDLRHGMRMLKRAGVTLLNQSVLLRDINDSAPVLAALSNALFDAGILPY 282

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           YLH  D   G +HF ++ E  + IV  L   +SG   P    ++ G   K  +D  
Sbjct: 283 YLHVLDKVQGAAHFYVSDERARIIVRELLTMVSGYMVPKLAREIGGEPSKTPLDLQ 338


>gi|261254094|ref|ZP_05946667.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891]
 gi|260937485|gb|EEX93474.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891]
          Length = 340

 Score =  385 bits (991), Expect = e-105,   Method: Composition-based stats.
 Identities = 97/324 (29%), Positives = 163/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++    L     I         +    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPAKLLEELEIDPTPWQSGFDARKLFAQRVPQSFVDRMEKGNPFDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  I      DP+ + N+S + G++H+Y +R L+ +   C + CR+CFRR     +
Sbjct: 78  PLSEEFEIHEGYSNDPLEEQNNS-IPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPYDE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
             +  S    + +L YIQ+  +I EVI +GGDPL+   + L  ++  +  I H++ LR H
Sbjct: 137 NKS--SKSVWQQSLDYIQQHPEIDEVILSGGDPLMAKDEELNWLVNHIADIPHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI P L   L+       +  H NH  E  +E   +++ L  AG+ LL+Q 
Sbjct: 195 SRLPVVIPARITPALANLLENTRLQTILVTHINHAQEIHQELRDSLTTLKRAGVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           V+LKG+ND  +    L +   +  + PYY+H  D   G +HF ++ ++ + I+A + EK+
Sbjct: 255 VMLKGVNDSIDDQVTLSQALFDAGVLPYYMHVLDKVQGAAHFFISDQQAKIIMAGVMEKV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRASKTPLDLH 338


>gi|303250421|ref|ZP_07336619.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307252226|ref|ZP_07534123.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307261137|ref|ZP_07542814.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|302650747|gb|EFL80905.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860148|gb|EFM92164.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306869167|gb|EFN00967.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 333

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 91/315 (28%), Positives = 147/315 (46%), Gaps = 3/315 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +       L     +  +  +        +++ +    A  +   + NDP+  Q +    
Sbjct: 19  QAFNDPAALLEYLELNPQAFETAITARKLFALRVPRAFAAKMQKGDKNDPLFLQAMSAAA 78

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E        +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CFRR          
Sbjct: 79  EFLQAEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYD--DVK 135

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
                 +  L YI   +++ EVIF+GGDPL+     L  ++  L  I H++ LR H+R+P
Sbjct: 136 SGKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P RI  +L   L ++   V +  H NHP E  E     +++L  A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQANVVLLNQSVLLK 255

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+ +IL  L     E  + PYYLH  D   G SHF +   +  +I   L+   SG  
Sbjct: 256 GVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYL 315

Query: 306 QPFYILDLPGGYGKV 320
            P    ++     K 
Sbjct: 316 VPKLAREIAREPNKT 330


>gi|223041468|ref|ZP_03611671.1| hypothetical protein AM202_0087 [Actinobacillus minor 202]
 gi|223017726|gb|EEF16133.1| hypothetical protein AM202_0087 [Actinobacillus minor 202]
          Length = 333

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 93/321 (28%), Positives = 147/321 (45%), Gaps = 4/321 (1%)

Query: 1   MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            QL   +       L     +   + ++       +++ +    A  +   + NDP+  Q
Sbjct: 13  WQLDLAQAFNDPVALLEYLELNPREFEQAILARKLFAMRVPRPFAEKMQKGDKNDPLFLQ 72

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +    E   +    +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CFRR    
Sbjct: 73  AMTSSSEFTQVEGFIKDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPY 131

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +         + +L YI E  +I EVI +GGDPL+   + L  +L  L  I HV+ LR
Sbjct: 132 --EDVKSGKTVWQQSLQYIAEHPEIEEVILSGGDPLMAKDEELDWILTALEKINHVKTLR 189

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P RI  +L     ++   V +  H NH  E        ++ L  +G++LL+
Sbjct: 190 IHTRLPVVIPNRITSQLCLRFADSRLNVVMVTHINHANEIDTVLANKMAELKQSGVVLLN 249

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLKG+ND    L  L      + I PYYLH  D   G SHF +  E    I   L++
Sbjct: 250 QSVLLKGVNDSAITLKALSDKLFSIGILPYYLHLLDKVEGASHFFVEDEVAFSIYKELQK 309

Query: 300 KISGLCQPFYILDLPGGYGKV 320
             SG   P    ++     K 
Sbjct: 310 ISSGYLVPKLAREIAKEPNKT 330


>gi|325577289|ref|ZP_08147773.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392]
 gi|325160871|gb|EGC72992.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392]
          Length = 340

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 98/318 (30%), Positives = 150/318 (47%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L     +  E   E       +++ +       +   NP DP+  Q + 
Sbjct: 22  LKN-AISDPKILLKTLNLPVEDFAEDIAARKLFAMRVPLPFVEKMEKGNPKDPLFLQVMT 80

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
            ++E        +DP+ +   + +  I+H+Y +R+L      C V CR+CFRR     Q 
Sbjct: 81  VQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDQN 140

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               +    + A+ YI    +I EVIF+GGDP++        +L+ L  IKH+Q LR HS
Sbjct: 141 PG--NKVSWKQAIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERLEKIKHLQRLRIHS 198

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V P+RI  E    L  +        H NHP E  E    A+ +L  A +ILL+QSV
Sbjct: 199 RLPVVIPERITDEFCDLLLNSPLQAVFVTHINHPNEIDEGLAFAMQKLTEAKVILLNQSV 258

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLK +ND+P  L  L     +  I PYYLH  D   G SHF ++ E   +I   L+   S
Sbjct: 259 LLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDERALQIYRELQALTS 318

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 319 GYLVPKLAREIGGEPNKT 336


>gi|89075329|ref|ZP_01161751.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34]
 gi|89048878|gb|EAR54447.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34]
          Length = 340

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 95/318 (29%), Positives = 157/318 (49%), Gaps = 3/318 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            ++    L     I     +        +++ +     + +   NP+DP+ RQ +P ++E
Sbjct: 23  AISDPFQLLKLLKIDPTPWENGLAARKLFALRVPLSFIDKMEIGNPHDPLLRQILPLEQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +  +  + G++H+Y +R+LL +   C V CR+CFRR    S      
Sbjct: 83  FEVHQGYSIDPLKEQQND-IPGLLHKYHNRVLLIVKGGCAVNCRYCFRRHFPYSDNKG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +    + +L YI    +I EVI +GGDPL+     LQ +++ +  I H++ LR HSR+P+
Sbjct: 140 NKHQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLVEHIAAIPHIKRLRIHSRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L E      +  H NH  E  +    A+ +L  A + LL+Q VLLKG
Sbjct: 200 VIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMGKLKQANVTLLNQGVLLKG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + L +L     +  I+PYYLH  D   G +HF +  E  ++++A L  ++SG   
Sbjct: 260 VNDSVKALTDLSEALFDAGIQPYYLHVLDRVQGAAHFMIDDETARQLIAGLITQVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  +D 
Sbjct: 320 PKLTREIGGRASKTPLDL 337


>gi|254427978|ref|ZP_05041685.1| KamA family protein [Alcanivorax sp. DG881]
 gi|196194147|gb|EDX89106.1| KamA family protein [Alcanivorax sp. DG881]
          Length = 335

 Score =  385 bits (990), Expect = e-105,   Method: Composition-based stats.
 Identities = 102/323 (31%), Positives = 168/323 (52%), Gaps = 4/323 (1%)

Query: 1   MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +    +T   +L++   +  + +      +  + + +     +L+   NP+DP+ RQ
Sbjct: 14  WQRQQADLITDPAELFSQLALTPQDLPASLAAAGDFPLRVPRRYVDLMERGNPDDPLLRQ 73

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +   EE  +      DP+ + +H+ + G++H+Y  R LL +   C V+CR+CFRR    
Sbjct: 74  VLSAPEERQVHQGYSADPLDEADHTAVPGLLHKYHGRALLVVTGACAVHCRYCFRRHFPY 133

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
               T LS K  E AL ++  +  I EVI +GGDPL L+++RL+++L  L  I H++ LR
Sbjct: 134 Q---THLSGKRWEQALEWLAARPDIHEVILSGGDPLTLTNRRLEQLLDALAAIPHLRRLR 190

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR P+V P+R++  L   L        + +HANHP E S   +A      +AG+ LL+
Sbjct: 191 IHSRTPVVIPERLDAGLKALLTRDRWQTVLVLHANHPREISPALVARCRDWRSAGMTLLN 250

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL G+ND  + LA+L     +  + PYYLH  D   G +HF +     +++ A L+ 
Sbjct: 251 QSVLLAGVNDRVDTLADLSDALFDAGVLPYYLHQLDAVQGAAHFAVPDVIARELHADLRA 310

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++ G   P    + PG   K  +
Sbjct: 311 RLPGFLVPRLTREEPGEPAKTVL 333


>gi|90413354|ref|ZP_01221347.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK]
 gi|90325596|gb|EAS42065.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK]
          Length = 340

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 91/319 (28%), Positives = 153/319 (47%), Gaps = 3/319 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            ++    L     I     ++       +++ +     + +   NP DP+ RQ +P + E
Sbjct: 23  AISDPFLLLKTLKIDPTPWEKGLAARKLFALRVPMSFVDRMEIGNPYDPLLRQILPLEPE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +   + + G++H+Y +R L+ +   C V CR+CFRR           
Sbjct: 83  FEVHDGYSLDPL-EEQDNAIPGLLHKYKNRALMIVKGGCAVNCRYCFRRHFPY--NDNKG 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                + AL YI E  ++ EVI +GGDPL+     L  ++  +  I H++ LR H+R+P+
Sbjct: 140 GKAQWKVALTYIAEHPELNEVILSGGDPLMAKDHELAWLVDEIESISHIKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL   +  +     +  H NH  E ++E   A+++L      LL+Q VLL+G
Sbjct: 200 VIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTKLKRVNATLLNQGVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND  + L +L        I+PYYLH  D   G +HF +   E ++++A L + +SG   
Sbjct: 260 INDSVDALTSLSEALFTAGIQPYYLHVLDKVQGATHFMVDDTEARQLMAGLMQNVSGYMV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D H
Sbjct: 320 PKLTREIGGRASKTPLDLH 338


>gi|145640274|ref|ZP_01795858.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021]
 gi|145274860|gb|EDK14722.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.4-21]
          Length = 338

 Score =  385 bits (989), Expect = e-105,   Method: Composition-based stats.
 Identities = 103/318 (32%), Positives = 157/318 (49%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L  A  + ++  ++       +S+ +     + I   NP DP+  Q + 
Sbjct: 20  LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E         DP+ + N + +  I+H+Y +R+L      C V CR+CFRR     + 
Sbjct: 79  SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               + K  + AL YI   S+I EVIF+GGDPL+     L  ++K L  I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAFLIKHLENIPHLQRLRIHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V PQRI  E    L E+     +  H NHP E  +    A+ +L    + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANAMQKLNAVNVTLLNQSV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLKG+NDD +IL  L     +  I PYYLH  D   G SHF ++  E  +I  +L+   S
Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 317 GYLVPKLAREIAGEPNKT 334


>gi|260774695|ref|ZP_05883599.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450]
 gi|260609351|gb|EEX35502.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450]
          Length = 340

 Score =  384 bits (987), Expect = e-104,   Method: Composition-based stats.
 Identities = 91/324 (28%), Positives = 165/324 (50%), Gaps = 4/324 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL +  ++  + L     I         E    ++  +     + +   NP DP+ RQ +
Sbjct: 19  QLAN-GISDPEKLLLQLEIDPSPWQSGFEARKLFAQRVPQSFVDRMEKGNPFDPLLRQVL 77

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE ++      DP+ + ++  + G++H+Y +R L+ +   C + CR+CFRR    ++
Sbjct: 78  PLSEEFDVHSGYSTDPLDEQDNQ-VPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYNE 136

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                +      +L Y+++  ++ E+I +GGDPL+   + LQ ++  +  I+H++ LR H
Sbjct: 137 NKG--NKSVWSQSLDYVRQHPELNEIILSGGDPLMAKDEELQWLIGQIADIQHIKRLRIH 194

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P RI     + L      V +  H NH  E ++E   A+S L   G+ LL+Q 
Sbjct: 195 SRLPVVIPARITTTFTKLLAGTRLQVILVTHINHANEINQELRDALSSLRREGVTLLNQG 254

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           V+LKG+ND  E    L  +  +  + PYY+H  D   G +HF ++ ++ ++I+A + E++
Sbjct: 255 VMLKGVNDSVEAQVALSESLFDAGVLPYYIHVLDKVQGAAHFFISDQQAKQIMAGVIERV 314

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325
           SG   P    ++ G   K  +D H
Sbjct: 315 SGYLVPKLTREIGGRASKTPLDLH 338


>gi|54310450|ref|YP_131470.1| hypothetical protein PBPRA3383 [Photobacterium profundum SS9]
 gi|46914891|emb|CAG21668.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 357

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 93/319 (29%), Positives = 154/319 (48%), Gaps = 3/319 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            ++    L     I     ++       +++ +     + +   NP DP+ RQ +P + E
Sbjct: 40  AISDPFLLLKTLKIDPIPWEKGLAARKLFALRVPMSFVDRMEIGNPYDPLLRQVLPLEPE 99

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             +      DP+ +   + + G++H+Y +R L+ +   C V CR+CFRR    S      
Sbjct: 100 FEVHDGYSLDPLKEQ-DNAIPGLLHKYKNRALMIVKGGCAVNCRYCFRRHFPYSDNKG-- 156

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                + AL YI E  ++ EVI +GGDPL+     L  ++  +  I H++ LR H+R+P+
Sbjct: 157 GKTQWKKALNYIAEHPELNEVILSGGDPLMAKDHELAWLVDEIESIPHIKRLRIHTRLPV 216

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI  EL   +  +     +  H NH  E ++E   A+++L    + LL+Q VLL+G
Sbjct: 217 VIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTKLKRVNVTLLNQGVLLRG 276

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND  E L  L  +     I+PYYLH  D   G +HF +   E + ++A L + +SG   
Sbjct: 277 INDSVEALTALSESLFTAGIQPYYLHVLDKVQGAAHFMIDDTEARHLMAGLMQNVSGYMV 336

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K  +D H
Sbjct: 337 PKLTREIGGRTSKTPLDLH 355


>gi|220934405|ref|YP_002513304.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995715|gb|ACL72317.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 348

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 108/324 (33%), Positives = 168/324 (51%), Gaps = 3/324 (0%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q L+   +T  + L     +    +   +  +  + + +       + P +PNDP+ RQ
Sbjct: 26  WQRLQAAAITDPEVLIRRLGLDPALLPAARRAAELFRLRVPDGYLARMRPGDPNDPLLRQ 85

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E   +P   EDP+GD       G++H+Y  R+LL     C V+CR+CFRR    
Sbjct: 86  VLPLDAEYRDVPGFVEDPVGDGAAMVAPGLLHKYRGRVLLVTTGACAVHCRYCFRRHFPY 145

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            +     +  + +AAL YI     I EVI +GGDPL LS +RL  +   L  I HV+ LR
Sbjct: 146 GE--ANPARGEWQAALDYIAGDDSIHEVILSGGDPLSLSDERLSGLAGALGEIPHVRRLR 203

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR P++ P+R++ +L+  L+       + IHANH  E       A++RLA AG+ LL+
Sbjct: 204 VHSRQPVILPERVDEDLLAWLRPGRFQTVLVIHANHAREIHWPVREALARLARAGVSLLN 263

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+G+NDD + LA+L  T     + PYYLH  D   G SHF++  +   ++   L+ 
Sbjct: 264 QSVLLRGVNDDVDTLADLSETLSATGVMPYYLHQLDPVRGASHFQVDDDRALRLHHGLRA 323

Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
           ++ G   P  + ++PG   K  + 
Sbjct: 324 RLPGYLVPRLVREIPGQDAKSPLS 347


>gi|229844579|ref|ZP_04464719.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1]
 gi|229812828|gb|EEP48517.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1]
          Length = 338

 Score =  383 bits (985), Expect = e-104,   Method: Composition-based stats.
 Identities = 101/318 (31%), Positives = 154/318 (48%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L  A  + ++  ++       +S+ +     + I   NP DP+  Q + 
Sbjct: 20  LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E         DP+ + N + +  I+H+Y +R+L      C V CR+CFRR     + 
Sbjct: 79  SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               + K  + AL YI    +I EVIF+GGDPL+     L  ++K L  I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V PQRI  E    L E      +  H NHP E  +    A+ +L    + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LLK +NDD +IL  L     +  I PYYLH  D   G SHF ++  E  +I  +L+   S
Sbjct: 257 LLKDVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 317 GYLVPKLAREIAGEPNKT 334


>gi|145628680|ref|ZP_01784480.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21]
 gi|144979150|gb|EDJ88836.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21]
          Length = 309

 Score =  382 bits (983), Expect = e-104,   Method: Composition-based stats.
 Identities = 101/306 (33%), Positives = 148/306 (48%), Gaps = 2/306 (0%)

Query: 15  YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER 74
             A  + K+  ++       +S+ +     + I   NP DP+  Q +    E        
Sbjct: 2   LKALNLPKDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMCSDLEFVQAEGFS 61

Query: 75  EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
            DP+ + N + +  I+H+Y +R+L      C V CR+CFRR     +     + K  + A
Sbjct: 62  TDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDENPG--NKKSWQLA 119

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           L YI    +I EVIF+GGDPL+     L  ++K L  I H+Q LR H+R+P+V PQRI  
Sbjct: 120 LDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHTRLPVVIPQRITD 179

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           E    L E      +  H NHP E  +    A+ +L    + LL+QSVLLKG+NDD +IL
Sbjct: 180 EFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSVLLKGVNDDAQIL 239

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
             L     +  I PYYLH  D   G SHF ++  E  +I  +L+   SG   P    ++ 
Sbjct: 240 KILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTSGYLVPKLAREIA 299

Query: 315 GGYGKV 320
           G   K 
Sbjct: 300 GEPNKT 305


>gi|218780437|ref|YP_002431755.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761821|gb|ACL04287.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 353

 Score =  382 bits (981), Expect = e-104,   Method: Composition-based stats.
 Identities = 123/340 (36%), Positives = 187/340 (55%), Gaps = 10/340 (2%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           + S   L     I       + + +  Y + +T    +LI   N  DPIARQ IP  EEL
Sbjct: 21  IISPDGLSRILPID---FQAMGKAAETYPMRITKYFLSLIREQN--DPIARQVIPSAEEL 75

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +       DP+ + + SP+ G++HRYP  +L ++ + C VYCR C R+  VG  K   ++
Sbjct: 76  SD-ASLSPDPLCEEDQSPVPGLIHRYPHHVLFQVENRCAVYCRHCLRKRKVGGVKP--VT 132

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
           ++     + YI+   +I EV+ +GGDPL++   +L  +L+ LR I HV+ LR HSR+P V
Sbjct: 133 AEALAQGVDYIRSNQEIREVVLSGGDPLVMEDDKLLDLLRRLRAINHVRTLRVHSRIPGV 192

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI PEL + L +   P+Y+ I  NHP E + E+  A   LA+ G+ L  Q+VLLKG+
Sbjct: 193 LPQRITPELAKGLADF-HPLYMNIQFNHPREITPESEEACRILADQGVPLGCQTVLLKGV 251

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           NDD  +L  LM   + +R++PYYLH  D   G +HF + I  G K++ +L+  I G   P
Sbjct: 252 NDDEAVLRELMEELLRIRVRPYYLHQLDRVKGAAHFHVPISRGVKLMQALRGSIPGTAIP 311

Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            Y++DLPGG GK  +   +I      +  + +    +  Y
Sbjct: 312 HYVVDLPGGGGKAPL-PESIVGREENAILVRNFEGKIFRY 350


>gi|53729180|ref|ZP_00134024.2| COG1509: Lysine 2,3-aminomutase [Actinobacillus pleuropneumoniae
           serovar 1 str. 4074]
 gi|126208156|ref|YP_001053381.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae L20]
 gi|190149985|ref|YP_001968510.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303252405|ref|ZP_07338571.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247647|ref|ZP_07529688.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307263313|ref|ZP_07544931.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126096948|gb|ABN73776.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
 gi|189915116|gb|ACE61368.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|302648864|gb|EFL79054.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306855815|gb|EFM87977.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306871375|gb|EFN03101.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 333

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 3/315 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +       L     +  +  +        +++ +    A  +   + NDP+  Q +    
Sbjct: 19  QAFNDPTALLEYLELNPQAFETAITARKLFALRVPRAFAAKMQKGDKNDPLFLQAMSAAA 78

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E        +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CFRR          
Sbjct: 79  EFLQAEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYD--DVK 135

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
                 +  L YI   +++ EVIF+GGDPL+     L  ++  L  I H++ LR H+R+P
Sbjct: 136 SGKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P RI  +L   L ++   V +  H NHP E  E     +++L  A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLK 255

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+ + L  L     +  + PYYLH  D   G SHF +  ++  +I   L+   SG  
Sbjct: 256 GVNDNAQTLKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYL 315

Query: 306 QPFYILDLPGGYGKV 320
            P    ++     K 
Sbjct: 316 VPKLAREIAREPNKT 330


>gi|307256695|ref|ZP_07538474.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864743|gb|EFM96647.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 333

 Score =  381 bits (980), Expect = e-104,   Method: Composition-based stats.
 Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 3/315 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +       L     +  ++ +        +++ +       +   + NDP+  Q +   E
Sbjct: 19  QAFNDPTALLEYLELNPKEFETAITARKLFALRVPRPFVEKMRKGDKNDPLFLQAMSAAE 78

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E   +    +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CFRR     +  + 
Sbjct: 79  EFLQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDEVKS- 136

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
                 +  L YI   +++ EVIF+GGDPL+     L  ++  L  I H++ LR H+R+P
Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDNELDWLISALEQIPHIKTLRIHTRLP 195

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P RI  +L   L ++   V +  H NHP E  E     +++L  A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQANVVLLNQSVLLK 255

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+ + L  L     +  + PYYLH  D   G SHF +   +  +I   L+   SG  
Sbjct: 256 GVNDNAQTLKALSDKLFDSGVLPYYLHLLDRVEGASHFFIEDRQAAEIYKELQRISSGYL 315

Query: 306 QPFYILDLPGGYGKV 320
            P    ++     K 
Sbjct: 316 VPKLAREIAKEPNKT 330


>gi|261492016|ref|ZP_05988591.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
 gi|261494571|ref|ZP_05991053.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261309762|gb|EEY10983.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
           OVINE]
 gi|261312299|gb|EEY13427.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str.
           BOVINE]
          Length = 330

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 100/326 (30%), Positives = 157/326 (48%), Gaps = 10/326 (3%)

Query: 2   QLRHKTLTSAQ-------DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND 54
           Q++ + LT          DL     +     +        +++ +  + A  +   NPND
Sbjct: 5   QIKPRWLTELAQAFNNPIDLLQFLELNPNDFEGDIAARKLFALRVPRMFAEKMEKGNPND 64

Query: 55  PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           P+  Q +  + E         DP+ +   SP   I+H+Y +R+L  L + C + CR+CFR
Sbjct: 65  PLFLQAMSLQAEFIEAEGFVVDPL-EEQQSPAPNILHKYHNRLLFMLKNSCAINCRYCFR 123

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
           R     +  +       +  L YI E  ++ EVI +GGDPL+   + L  +L  L  I H
Sbjct: 124 RHFPYEEVKS--GKAVWQQGLTYIAEHPELEEVILSGGDPLMAKDQDLDWILTQLEQISH 181

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           ++ LR HSR+P+V P RI  EL + L ++   V +  H NH  E        +++L  AG
Sbjct: 182 IKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLVTHINHANEIDAVFANKMAQLKKAG 241

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
           ++LL+QSV+LKG+ND+ + L  L     E  I PYYLH  D  AG SHF +  E+  +I 
Sbjct: 242 VVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPYYLHLFDKVAGASHFYIEDEQAGEIY 301

Query: 295 ASLKEKISGLCQPFYILDLPGGYGKV 320
             L+   SG   P    ++     K+
Sbjct: 302 RELQRITSGYLVPKLAREIAKEPNKI 327


>gi|126666938|ref|ZP_01737914.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17]
 gi|126628654|gb|EAZ99275.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17]
          Length = 350

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 102/327 (31%), Positives = 162/327 (49%), Gaps = 4/327 (1%)

Query: 1   MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q  L +      + L    L  ++ +         +SI +       +   NPNDP+ R
Sbjct: 26  WQQILANSIDRPVELLERLGLCPEQWMAGADAGHLLFSIRVPEPFLARMEYGNPNDPLLR 85

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +P  +E   L     DP+ + +     G++ +Y  R LL +   C + CR+CFRR   
Sbjct: 86  QVLPLVDETRTLAGFVADPLAEADAMATTGLIRKYKSRALLMVTGQCAINCRYCFRRHFP 145

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             ++   L  +D +  L  +    +I EVIF+GGDPL  + K L +  K L  I H++ L
Sbjct: 146 YDEQ--RLKPQDRQTVLDTLANSPEINEVIFSGGDPLAANDKLLAQWAKALEQIPHLRRL 203

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R H+R+P+V PQR+   L+Q ++     V + +H NHP E  +  + A+ RL  AG+ LL
Sbjct: 204 RIHTRLPVVIPQRVCDALLQWIRATRLRVVVVLHINHPAEIDQATVQALQRLTEAGVTLL 263

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +QSV+L+G+ND  ++L  L     +  + PYYLH  D  AG  HF +   E + +   L 
Sbjct: 264 NQSVILRGVNDSVDVLEQLSEQLFDAGVLPYYLHAFDPVAGAHHFAVPDSEAKALTRELL 323

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTH 325
           E++ G   P  + +LPG   K  +D  
Sbjct: 324 ERLPGFLVPRLVRELPGAGSKTPLDLE 350


>gi|13471862|ref|NP_103429.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
 gi|14022606|dbj|BAB49215.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
          Length = 367

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 132/349 (37%), Positives = 191/349 (54%), Gaps = 5/349 (1%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q   +  +   +DL     +   +    +  + H+ +       +LI+ ++P DPI  Q
Sbjct: 16  WQDDVRQGVRHVRDLDRL-PLSPVERAAAQAAAAHHKVRAPKAYLDLIDWNDPADPIRAQ 74

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            IP  +EL     E  DPI D++ SP+  + HR+ DR+LL   + C VYCRFCFR+E + 
Sbjct: 75  VIPSPDELEEAEGELGDPIADHDFSPVPRLTHRHTDRVLLFPTYQCAVYCRFCFRKESLT 134

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           S  G   + +  E ALAYI +  +I EVI TGGDPL L  K L +++  +  I HV++LR
Sbjct: 135 S-IGRGYTREALEPALAYIADHPEIREVILTGGDPLSLPDKALAEIVARIEAIPHVRLLR 193

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+RVP+  P RI   L+  L +    V +  H NH  E +     A   +  AG +LL+
Sbjct: 194 IHTRVPVALPSRITSGLVAAL-QGRLMVTVVTHFNHAREITPATEVACRTMRQAGFVLLN 252

Query: 240 QSVLLKGINDDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           QSVLLKG+ND  E+L  L R     L +KPYYLHH DLA G +H R TI +GQ +V +L+
Sbjct: 253 QSVLLKGVNDTVEVLEELCRELMYRLGVKPYYLHHGDLARGMAHRRTTIAQGQALVEALR 312

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            ++SG+C P Y+LDLP G GKV +    I+     ++ I      +  Y
Sbjct: 313 ARLSGICNPVYVLDLPEGGGKVPLGPCPIEGREGDTWRIRGQDGAMRTY 361


>gi|165976091|ref|YP_001651684.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|165876192|gb|ABY69240.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
          Length = 333

 Score =  381 bits (979), Expect = e-103,   Method: Composition-based stats.
 Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 3/315 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +       L     +  +  +        +++ +    A  +   + NDP+  Q +    
Sbjct: 19  QAFNDPTALLEYLELNPQAFETAITARKLFALRVPRAFAAKMQKGDKNDPLFLQAMSAAA 78

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E        +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CFRR          
Sbjct: 79  EFLQAEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYD--DVK 135

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
                 +  L YI   +++ EVIF+GGDPL+     L  ++  L  I H++ LR H+R+P
Sbjct: 136 SGKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P RI  +L   L ++   V +  H NHP E  E     +++L  A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLK 255

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+ + L  L     +  + PYYLH  D   G SHF +  ++  +I   L+   SG  
Sbjct: 256 GVNDNVQTLKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYL 315

Query: 306 QPFYILDLPGGYGKV 320
            P    ++     K 
Sbjct: 316 VPKLAREIAREPNKT 330


>gi|307249881|ref|ZP_07531855.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306858070|gb|EFM90152.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
          Length = 333

 Score =  380 bits (978), Expect = e-103,   Method: Composition-based stats.
 Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 3/315 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +       L     +  ++ +        +++ +       +   + NDP+  Q +   E
Sbjct: 19  QAFNDPITLLEHLELNPKEFETAITARKLFALRVPRPFVEKMQKGDKNDPLFLQAMSAAE 78

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E   +    +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CFRR          
Sbjct: 79  EFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYD--DVK 135

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
                 +  L YI   +++ EVIF+GGDPL+     L  ++  L  I H++ LR H+R+P
Sbjct: 136 SGKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P RI  +L   L ++   V +  H NHP E  E     +++L  A ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQANVVLLNQSVLLK 255

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+ +IL  L     E  + PYYLH  D   G SHF +   +  +I   L+   SG  
Sbjct: 256 GVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYL 315

Query: 306 QPFYILDLPGGYGKV 320
            P    ++     K 
Sbjct: 316 VPKLAREIAREPNKT 330


>gi|329123649|ref|ZP_08252209.1| KamA family protein [Haemophilus aegyptius ATCC 11116]
 gi|327469848|gb|EGF15313.1| KamA family protein [Haemophilus aegyptius ATCC 11116]
          Length = 338

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 101/318 (31%), Positives = 155/318 (48%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L  A  + ++  ++       +S+ +     + I   NP DP+  Q + 
Sbjct: 20  LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E         DP+ + N + +  I+H+Y +R+L      C V CR+CFRR     + 
Sbjct: 79  SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMTKGGCAVNCRYCFRRHFPYDEN 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               + K  + AL YI   S+I EVIF+GGDPL+     L  ++K L  I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V PQRI  E    L E      +  H NHP E  +    A+ +L    + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNAMQKLNAVNVTLLNQSV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LL+ +NDD +IL  L     +  I PYYLH  D   G SHF ++  E  +I  +L+   S
Sbjct: 257 LLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++ G   K 
Sbjct: 317 GYLVPKLAREIAGEPNKT 334


>gi|251791935|ref|YP_003006655.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700]
 gi|247533322|gb|ACS96568.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700]
          Length = 339

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 99/314 (31%), Positives = 152/314 (48%), Gaps = 3/314 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           ++  + L     +  E   +  E    +++ +       +   NP DP+  Q +   +E 
Sbjct: 24  ISDPKILLQHLELPFEPFKQDIEARKLFAMRVPMPFVEKMEKGNPKDPLFLQVMSSADEF 83

Query: 68  NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
                  +DP+ + N  + +  I+H+Y +R+L  +   C V CR+CFRR     +     
Sbjct: 84  LQAEGFSKDPLEEQNDKNVVSNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYEENKG-- 141

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YI +  +I EVIF+GGDPL+     L  ++K L  I H++ LR HSR+P+
Sbjct: 142 TKQNWQTALQYIAQHPEIEEVIFSGGDPLMAKDHELGWLIKHLENIPHLKRLRIHSRLPV 201

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI   L   L E      +  H NH  E  E+   A+ +L N G++LL+QSVLLK 
Sbjct: 202 VIPQRITDALCAMLAETRLQKILVTHVNHANEIDEDFSHAMDKLKNCGVVLLNQSVLLKN 261

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD  IL  L      + I PYYLH  D   G +HF L   +   I   L+   SG   
Sbjct: 262 VNDDAYILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDAQALSIYKQLQRITSGYLV 321

Query: 307 PFYILDLPGGYGKV 320
           P    ++ G   K 
Sbjct: 322 PKLAREIGGEPNKT 335


>gi|45657183|ref|YP_001269.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600421|gb|AAS69906.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 429

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 107/331 (32%), Positives = 182/331 (54%), Gaps = 7/331 (2%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL+++ +   + L     + + +   I+      +++ TP   +L +P +PN PI +  +
Sbjct: 47  QLQNR-VKGFE-LERYFDLTESEKIGIENTI-RLNVSATPYYISLADPEDPNCPIRKMIL 103

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P+++E    PEE  DP+ +   SP+KG+ H YPDR+LL   H C VYCR C R   V   
Sbjct: 104 PREDECIFSPEESPDPLHEERLSPVKGLTHMYPDRVLLFTNHECSVYCRHCMRGRKVSDS 163

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           K  +L+ +D E    YI+   +I +V+ +GGDPL LS  ++  +L+ L  I+HV+I R  
Sbjct: 164 KERMLT-EDLEICFDYIKSHPEITDVVLSGGDPLNLSDSKIDWILERLEKIEHVKICRLG 222

Query: 182 SRVPIVDPQRINPELIQCLKEA---GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           +R P+  P R+  +L   ++        ++     NH  E + EA  AI +L  AG+ + 
Sbjct: 223 TRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQFNHSKECTPEAKEAILKLLKAGVNVG 282

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q VLLK +ND  + +  L +  +ELR++ YY++ P+L  G+  FR  + +G +I+  ++
Sbjct: 283 NQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMYDPELIPGSRGFRTPLAKGIEIIEFMR 342

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
            KI G+  P ++ DLPGG GK+ +  +    
Sbjct: 343 GKIGGMGIPQFVNDLPGGGGKITLTPNWYLG 373


>gi|116327784|ref|YP_797504.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331557|ref|YP_801275.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116120528|gb|ABJ78571.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116125246|gb|ABJ76517.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 420

 Score =  380 bits (977), Expect = e-103,   Method: Composition-based stats.
 Identities = 114/331 (34%), Positives = 187/331 (56%), Gaps = 7/331 (2%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL+++ +   + L     + + +   I++     +++ TP   +L +P +P+DPI +  I
Sbjct: 36  QLQNR-VRGFE-LGRYFDLTESEKVGIEDTI-RLNVSATPYYISLTDPEDPDDPIRKMII 92

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P++ E    PEE  DP+ +   SP+KG+ H YPDR+LL   H C VYCR C R   V   
Sbjct: 93  PREAETVFSPEESPDPLHEERLSPVKGLTHMYPDRVLLFTNHECSVYCRHCMRGRKVSDS 152

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           K  +++ +D EA   YI+   +I +V+ +GGDPL LS  ++ ++L+ L  I+HV+I R  
Sbjct: 153 KERMIT-EDLEACFEYIEACPEITDVVLSGGDPLNLSDSKIDRILERLEKIEHVKICRLG 211

Query: 182 SRVPIVDPQRINPELIQCLKEA---GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           +R P+  P RI  +L   ++        ++     NH  E + EA  AI +L  AG+ + 
Sbjct: 212 TRNPVTLPFRITSDLCNIIESHNTHRLSIFCNTQFNHAKECTSEAKEAILKLLKAGVNVG 271

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q VLLKGIND  EI+  L +  +ELR++ YY++ P+L  G+  FR  + +G +I++ ++
Sbjct: 272 NQCVLLKGINDSGEIMLELHKKLLELRVRAYYMYDPELIPGSRGFRTPLAKGIEIISYMR 331

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
            KI G+  P ++ DLPGG GKV +       
Sbjct: 332 GKIGGMGIPQFVNDLPGGGGKVTLTPDWYLG 362


>gi|24215400|ref|NP_712881.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
           56601]
 gi|24196517|gb|AAN49899.1|AE011436_14 L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str.
           56601]
          Length = 416

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 107/331 (32%), Positives = 182/331 (54%), Gaps = 7/331 (2%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL+++ +   + L     + + +   I+      +++ TP   +L +P +PN PI +  +
Sbjct: 34  QLQNR-VKGFE-LERYFDLTESEKIGIENTI-RLNVSATPYYISLADPEDPNCPIRKMIL 90

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P+++E    PEE  DP+ +   SP+KG+ H YPDR+LL   H C VYCR C R   V   
Sbjct: 91  PREDECIFSPEESPDPLHEERLSPVKGLTHMYPDRVLLFTNHECSVYCRHCMRGRKVSDS 150

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           K  +L+ +D E    YI+   +I +V+ +GGDPL LS  ++  +L+ L  I+HV+I R  
Sbjct: 151 KERMLT-EDLEICFDYIKSHPEITDVVLSGGDPLNLSDSKIDWILERLEKIEHVKICRLG 209

Query: 182 SRVPIVDPQRINPELIQCLKEA---GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           +R P+  P R+  +L   ++        ++     NH  E + EA  AI +L  AG+ + 
Sbjct: 210 TRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQFNHSKECTPEAKEAILKLLKAGVNVG 269

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q VLLK +ND  + +  L +  +ELR++ YY++ P+L  G+  FR  + +G +I+  ++
Sbjct: 270 NQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMYDPELIPGSRGFRTPLAKGIEIIEFMR 329

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
            KI G+  P ++ DLPGG GK+ +  +    
Sbjct: 330 GKIGGMGIPQFVNDLPGGGGKITLTPNWYLG 360


>gi|119475089|ref|ZP_01615442.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143]
 gi|119451292|gb|EAW32525.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143]
          Length = 343

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 97/316 (30%), Positives = 170/316 (53%), Gaps = 2/316 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +   ++L+N   + K ++ +     + + + +     + +   + +DP+ +Q +P  +EL
Sbjct: 29  IRDPEELFNLLELDKSKLPDALRGCDDFPLQVPRAFVDRMVKGDWSDPLLQQILPLGQEL 88

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           ++ P    DP+ + + +P+ G++H+Y  R+LL +   C + CR+CFRR     +     S
Sbjct: 89  DLHPGFSNDPLLELSDNPIPGLIHKYHGRVLLIVSGGCAINCRYCFRRHFPYQEN--NPS 146

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
            ++ + AL YI++ + I EVI +GGDPL  +   L+ +   +  I HV+ILR HSR+P+V
Sbjct: 147 QREWQQALDYIRQDNSIKEVILSGGDPLAANDNMLRDLTTRIADIPHVEILRVHSRMPVV 206

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            PQRI    +  L        + IH+NHP E     I A+  L   G+ LL+Q+VLL GI
Sbjct: 207 IPQRITSPSMNWLTNTRLTPVMVIHSNHPNEIDHHVIEALQTLKREGVTLLNQTVLLAGI 266

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND+PE L  L +      + PYYLH  D  +G +HF +T    ++++  L+ ++ G   P
Sbjct: 267 NDNPEALLALSKRLFAAGVLPYYLHMLDKVSGAAHFEVTERRAKELITILRNQLPGYLIP 326

Query: 308 FYILDLPGGYGKVKID 323
             + +  G   K+ I+
Sbjct: 327 KLVREQSGELSKMPIN 342


>gi|332160002|ref|YP_004296579.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325664232|gb|ADZ40876.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 281

 Score =  380 bits (976), Expect = e-103,   Method: Composition-based stats.
 Identities = 94/284 (33%), Positives = 153/284 (53%), Gaps = 3/284 (1%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           + P NP+DP+  Q +  +EE    P    DP+ +   S + G++H+Y +R LL +   C 
Sbjct: 1   MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCA 59

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           + CR+CFRR           +  +   AL Y+ +  ++ E+IF+GGDPL+     L  +L
Sbjct: 60  INCRYCFRRHFPYQDNQG--NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWLL 117

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
             +  I H++ LR H+R+P+V P RI  EL Q L ++   V +  H NH  E       +
Sbjct: 118 DEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRDS 177

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           +++L  AG+ LL+QSVLL+G+NDD E+LA L  T  +  I PYY+H  D   G +HF + 
Sbjct: 178 MAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMVD 237

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
            +E ++++  L  ++SG   P    ++ G   K  +D   ++  
Sbjct: 238 DDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLDLRLMQSE 281


>gi|254362093|ref|ZP_04978215.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213]
 gi|153093652|gb|EDN74611.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213]
          Length = 330

 Score =  379 bits (975), Expect = e-103,   Method: Composition-based stats.
 Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 3/315 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +   +  DL     +     +        +++ +  + A  +   NPNDP+  Q +  + 
Sbjct: 16  QAFNNPIDLLQFLELNPNDFEGDIAARKLFALRVPRMFAEKMEKGNPNDPLFLQAMSLQA 75

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E         DP+ +   SP   I+H+Y +R+L  L + C + CR+CFRR     +  + 
Sbjct: 76  EFIEAEGFVVDPL-EEQQSPAPNILHKYHNRLLFMLKNSCAINCRYCFRRHFPYEEVKS- 133

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
                 +  L YI E  ++ EVI +GGDPL+   + L  +L  L  I H++ LR HSR+P
Sbjct: 134 -GKAVWQQGLTYIAEHPELEEVILSGGDPLMAKDQDLDWILTQLEQISHIKTLRIHSRLP 192

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P RI  EL + L ++   V +  H NH  E        +++L  AG++LL+QSV+LK
Sbjct: 193 VVIPNRITTELCERLSKSRLNVVLVTHINHANEIDAVFANKMAQLKKAGVVLLNQSVMLK 252

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+ + L  L     E  I PYYLH  D  AG SHF +  E+  +I   L+   SG  
Sbjct: 253 GVNDNAQTLKRLSDKLFEYGILPYYLHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYL 312

Query: 306 QPFYILDLPGGYGKV 320
            P    ++     K+
Sbjct: 313 VPKLAREIAKEPNKI 327


>gi|326404849|ref|YP_004284931.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301]
 gi|325051711|dbj|BAJ82049.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301]
          Length = 325

 Score =  379 bits (974), Expect = e-103,   Method: Composition-based stats.
 Identities = 150/321 (46%), Positives = 194/321 (60%), Gaps = 6/321 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL +A  L  A L        ++ ++  Y+ A+   +A LI   +P DPI  QFIP   E
Sbjct: 5   TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALI--GDPADPIGLQFIPDPAE 62

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   P ER DPIGD+  SP+ GIVHRYPDR LLK    CPVYCRFCFRRE VG + G VL
Sbjct: 63  LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  + EAA  ++ +   + EVI TGGDPLILS +RL  +   LR I H+  LR H+RVP+
Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP RI P L+  L +   P+++ +HANH  EF  EA A +  L  AGI LL QSVLL+G
Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + L  L  T +E  +KPYYLH  D A GT+ F + I EG+ ++A+L+  ISG   
Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPITEGRALIAALRGTISGHAL 300

Query: 307 PFYILDLPGGYGKVKIDTHNI 327
           P YILD P   GK  ++   +
Sbjct: 301 PTYILDSPA--GKTTLEPSPV 319


>gi|148261362|ref|YP_001235489.1| lysine 2,3-aminomutase YodO family protein [Acidiphilium cryptum
           JF-5]
 gi|146403043|gb|ABQ31570.1| L-lysine 2,3-aminomutase [Acidiphilium cryptum JF-5]
          Length = 325

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 150/321 (46%), Positives = 194/321 (60%), Gaps = 6/321 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           TL +A  L  A L        ++ ++  Y+ A+   +A LI   +P DPI  QFIP   E
Sbjct: 5   TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALI--GDPADPIGLQFIPDPAE 62

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   P ER DPIGD+  SP+ GIVHRYPDR LLK    CPVYCRFCFRRE VG + G VL
Sbjct: 63  LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  + EAA  ++ +   + EVI TGGDPLILS +RL  +   LR I H+  LR H+RVP+
Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            DP RI P L+  L +   P+++ +HANH  EF  EA A +  L  AGI LL QSVLL+G
Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND  + L  L  T +E  +KPYYLH  D A GT+ F + I EG+ ++A+L+  ISG   
Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPIVEGRALIAALRGTISGHAL 300

Query: 307 PFYILDLPGGYGKVKIDTHNI 327
           P YILD P   GK  ++   +
Sbjct: 301 PTYILDSPA--GKTTLEPSPV 319


>gi|90416321|ref|ZP_01224253.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium
           HTCC2207]
 gi|90332046|gb|EAS47260.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium
           HTCC2207]
          Length = 341

 Score =  379 bits (973), Expect = e-103,   Method: Composition-based stats.
 Identities = 98/324 (30%), Positives = 166/324 (51%), Gaps = 3/324 (0%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            +++  + +TS   L +   +  EQ+   ++ +  +++ +       + P NP DP+  Q
Sbjct: 20  WKVQLSQAVTSIDQLLSCLDLTIEQLSTSQQAAAEFALKVPRPFIQRMQPGNPKDPLLLQ 79

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E+   P+  +DP+ ++ H+P+ GIVH+Y +R+LL +   C + CR+CFRR    
Sbjct: 80  VLPVAAEMVPSPDYNQDPLEESKHNPIAGIVHKYANRLLLVISPACAINCRYCFRRHFPY 139

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            +     S +  + AL YI+    I EVI++GGDPL  +   L  +   +  I H++ LR
Sbjct: 140 DENRQ--SKQQWQTALDYIRNDKSINEVIYSGGDPLAANDTFLSWLTSEIADIAHIKRLR 197

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P RI+   +           + +H NH  E  ++   AI +L  AG+ +L+
Sbjct: 198 IHTRLPVVIPARIDQGFLNWATATRLKPIVVLHINHANEIDDDVAEAIRKLTGAGMQVLN 257

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+GIND    LA+L     +  + PYYLH  D  AG  HF L     +++   L+ 
Sbjct: 258 QSVLLRGINDSAVTLADLSERLFDCGVTPYYLHLCDPVAGAQHFDLDETTAKQLYGQLQT 317

Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
            + G   P  + ++P    K  I 
Sbjct: 318 LLPGFLVPKLVREIPDRESKTLIS 341


>gi|167469180|ref|ZP_02333884.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis
           FV-1]
          Length = 315

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 4/304 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T   +L     + +   + +       + + +       + P N +DP+  Q +  +EE
Sbjct: 15  ITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREE 74

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P    DP+ +   S + G++H+Y +R LL +   C V CR+CFRR           
Sbjct: 75  FITAPGFTHDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   AL YI++  ++ E+IF+GGDPL+     L  +L  L  IKH++ LR H+R+P+
Sbjct: 132 NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLRIHTRLPV 191

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L Q L  +   V +  H NH  E       +++RL  AG+ LL+QSVLL+G
Sbjct: 192 VIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLNQSVLLRG 251

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +N+D ++LA L     +  I PYY+H  D   G +HF +  +E  +++  L  ++SG   
Sbjct: 252 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEAGQLMKGLLSRVSGYLV 311

Query: 307 PFYI 310
           P   
Sbjct: 312 PRLT 315


>gi|189500360|ref|YP_001959830.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
           phaeobacteroides BS1]
 gi|189495801|gb|ACE04349.1| lysine 2,3-aminomutase YodO family protein [Chlorobium
           phaeobacteroides BS1]
          Length = 358

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 14/354 (3%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q+++  + S Q L     +  E+   I+ +       +TP  A+L++  +PN PI RQ I
Sbjct: 8   QMQN-LVDSVQKLEQYINVTDEERRTIESLDTK--WGVTPYFASLMDKDDPNCPIRRQVI 64

Query: 62  PQKEELNILPEEREDPIGDNNHS----PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           P  +E           +   N S        I  +Y DRI   ++  C +YCR CFR+E+
Sbjct: 65  PSMQEKVNEFGMDNYLLWKENRSTEEVRPDSIARQYHDRIAFTVIETCAIYCRHCFRKEL 124

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           V  Q   +    D +  LA+I E  +I +V+ TGGDPL+LS  +L +++  LR I HV++
Sbjct: 125 VVDQDLKL--RMDVDEGLAWIAEHPEIRDVLITGGDPLLLSDDKLARLIGRLREIPHVEM 182

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           +R  SR+PIV PQRI   L + +    K PV+I    NHP E +EE   A+  L + GI 
Sbjct: 183 IRIGSRLPIVLPQRITEGLKKAIGGFHKVPVWINTQCNHPKEITEETAKAVYELMSCGIN 242

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA- 295
           + +Q+VLLKGINDD E    L +  + +RI+PYY+ + + A G  HFR  +E+G +++  
Sbjct: 243 VGNQAVLLKGINDDVETFRELHQMLLRIRIRPYYVFYCEPAPGIDHFRTPVEKGAELIRD 302

Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYP 348
           +L+   +GL QP Y+  L    GKV +   + +    +  Y + +H       P
Sbjct: 303 ALRGHTTGLAQPMYV--LATNIGKVPLMPDYYMIDKNDKEYELRNHTGKTTKIP 354


>gi|307245529|ref|ZP_07527616.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307254485|ref|ZP_07536321.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258943|ref|ZP_07540674.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853588|gb|EFM85806.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306862535|gb|EFM94493.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866967|gb|EFM98824.1| Uncharacterized kamA family protein [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 333

 Score =  378 bits (972), Expect = e-103,   Method: Composition-based stats.
 Identities = 90/315 (28%), Positives = 151/315 (47%), Gaps = 3/315 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +       L     +  ++ +        +++ +       +   + NDP+  Q +   E
Sbjct: 19  QAFNDPITLLEHLELNPKEFETAITARKLFALRVPRPFVEKMQKGDKNDPLFLQAMSAAE 78

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E   +    +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CFRR     +  + 
Sbjct: 79  EFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDEVKS- 136

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
                 +  L YI   +++ EVIF+GGDPL+     L  ++  L  I H++ LR H+R+P
Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P RI  +L   L ++   V +  H NHP E  E     +++L  + ++LL+QSVLLK
Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQSKVVLLNQSVLLK 255

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           G+ND+ +IL  L     E  + PYYLH  D   G SHF +   +  +I   L+   SG  
Sbjct: 256 GVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYL 315

Query: 306 QPFYILDLPGGYGKV 320
            P    ++     K 
Sbjct: 316 VPKLAREIAREPNKT 330


>gi|167854986|ref|ZP_02477761.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755]
 gi|167853943|gb|EDS25182.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755]
          Length = 337

 Score =  378 bits (971), Expect = e-103,   Method: Composition-based stats.
 Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 3/310 (0%)

Query: 11  AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
            +DL N   +     ++       +++ +    A  +   +  DP+  Q I  +EE   +
Sbjct: 25  PEDLLNYLELNIADFEQDLTARKLFALRVPRPFAEKMKKGDRADPLFLQAITLQEEFTNV 84

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
               +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CFRR     +  +      
Sbjct: 85  DGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPYDEVKS--GKAT 141

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
            + +L YI+  S++ EVI +GGDPL+     +  +   L  I H+  +R HSR+P+V P 
Sbjct: 142 WQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQLEQISHINTVRIHSRLPVVIPN 201

Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           RI  EL + L ++   V +  H NH  E  +     + +L  + ++LL+QSVLLKGIND+
Sbjct: 202 RITDELCERLLQSRLKVVLVTHINHANEIDDIFAEKMQKLKQSNVVLLNQSVLLKGINDN 261

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
            + L  L        I PYYLH  D  AG SHF +      +I   L+   SG   P   
Sbjct: 262 AQTLKALSDKLFRNGILPYYLHLLDKVAGASHFYIEDSRAFEIYRELQRITSGYLVPKLA 321

Query: 311 LDLPGGYGKV 320
            ++     K 
Sbjct: 322 REMAKEPNKT 331


>gi|15601964|ref|NP_245036.1| hypothetical protein PM0099 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12720310|gb|AAK02183.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 337

 Score =  377 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 98/314 (31%), Positives = 152/314 (48%), Gaps = 3/314 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            ++  + L     +  E +++  E    + + +       +   NP DP+  Q +  ++E
Sbjct: 23  AISDPKILLETLNLPTENVEQDLEARRLFPLRVPLPFVEKMQKGNPQDPLFLQVMSFRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
              +    +DP+ +   + +  ++H+Y +R+LL +   C V CR+CFRR    +      
Sbjct: 83  FLQVEGFSKDPL-EEQDAVVPSVLHKYHNRLLLMVKGGCAVNCRYCFRRHFPYADNKG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  + + AL YI    +I EVIF+GGDPL+     L  ++K L  I H+Q LR H+R+P+
Sbjct: 140 NKANWQKALDYIANHPEIEEVIFSGGDPLMAKDHELDWLIKNLENIPHLQRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI  +  Q L E+     +  H NHP E       AI++L   G++LL+Q+VLLKG
Sbjct: 200 VIPQRITADFCQTLAESRFQTVLVTHINHPNEIDAFFAQAINKLREVGVLLLNQAVLLKG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND+  IL  L        I PYYLH  D   G SHF L       I   L+   SG   
Sbjct: 260 INDNAHILKQLGDKLFATNILPYYLHLLDKVEGASHFYLDDSRALNIYKELQSLTSGYLV 319

Query: 307 PFYILDLPGGYGKV 320
           P    ++     K 
Sbjct: 320 PKLAREIAKEPNKT 333


>gi|219870442|ref|YP_002474817.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis
           SH0165]
 gi|219690646|gb|ACL31869.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis
           SH0165]
          Length = 337

 Score =  377 bits (970), Expect = e-102,   Method: Composition-based stats.
 Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 3/310 (0%)

Query: 11  AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
            +DL N   +     ++       +++ +    A  +   +  DP+  Q I  +EE   +
Sbjct: 25  PEDLLNYLELNIADFEQDLTARKLFALRVPRPFAEKMKKEDRADPLFLQAITLQEEFTNV 84

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
               +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CFRR     +  +      
Sbjct: 85  DGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPYDEVKS--GKAT 141

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
            + +L YI+  S++ EVI +GGDPL+     +  +   L  I H+  +R HSR+P+V P 
Sbjct: 142 WQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQLEQISHINTVRIHSRLPVVIPN 201

Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           RI  EL + L ++   V +  H NH  E  +     + +L  + ++LL+QSVLLKGIND+
Sbjct: 202 RITDELCERLSQSRLKVVLVTHINHANEIDKIFAEKMQKLKQSNVVLLNQSVLLKGINDN 261

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
            + L  L        I PYYLH  D  AG SHF +      +I   L+   SG   P   
Sbjct: 262 AQTLKALSDKLFRYGILPYYLHLLDKVAGASHFYIEDSRAFEIYRELQRITSGYLVPKLA 321

Query: 311 LDLPGGYGKV 320
            ++     K 
Sbjct: 322 REMAKEPNKT 331


>gi|315634854|ref|ZP_07890136.1| KamA family protein [Aggregatibacter segnis ATCC 33393]
 gi|315476406|gb|EFU67156.1| KamA family protein [Aggregatibacter segnis ATCC 33393]
          Length = 339

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 96/314 (30%), Positives = 153/314 (48%), Gaps = 3/314 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           ++  + L     +  E   +  E    +++ +       +   NP DP+  Q +   +E 
Sbjct: 24  ISDPKILLQHLELPLESFKQDIEARKLFAMRVPLPFVEKMEKGNPKDPLFLQVMSSADEF 83

Query: 68  NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
                  +DP+ +    + +  I+H+Y +R+L  +   C V CR+CFRR      +    
Sbjct: 84  LQAEGFSKDPLEEQEDKNVVSNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPY--QDNKG 141

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YI E+ +I EVIF+GGDPL+     L+ ++K L  I H++ LR HSR+P+
Sbjct: 142 TKQNWQKALQYIAERPEIEEVIFSGGDPLMAKDHELEWLIKHLENIPHLKRLRIHSRLPV 201

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI     + L +      +  H NH  E   +   A+++L + G++LL+QSVLLK 
Sbjct: 202 VIPQRITDTFCRLLAQTRLQKILVTHVNHANEIDADFAHAMAKLKDCGVVLLNQSVLLKN 261

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD  IL  L      + I PYYLH  D   G +HF L      KI   L+   SG   
Sbjct: 262 VNDDALILKTLSDRLFSVGILPYYLHLLDKVEGATHFYLDDARALKIYKELQRISSGYLV 321

Query: 307 PFYILDLPGGYGKV 320
           P    ++ G   K 
Sbjct: 322 PKLAREIGGEPNKT 335


>gi|52424562|ref|YP_087699.1| KamA protein [Mannheimia succiniciproducens MBEL55E]
 gi|52306614|gb|AAU37114.1| KamA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 336

 Score =  377 bits (969), Expect = e-102,   Method: Composition-based stats.
 Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 3/314 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +++  + L     +  ++ ++       +++ +       +   N  DP+  Q +   +E
Sbjct: 22  SISDPEVLLKTLSLPIDKFEKDIHARKLFAMRVPLPFVRKMELGNAQDPLFLQAMSSADE 81

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
                   +DP+ +        I+H+Y +R+LL +   C + CR+CFRR    +      
Sbjct: 82  FLTADGFSKDPL-EEQQVVAPNILHKYKNRLLLMVKGGCAINCRYCFRRHFPYADNQG-- 138

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  + + AL YI    QI EVIF+GGDPL+     L  ++K L  I H+Q LR H+R+P+
Sbjct: 139 NKANWQKALDYISANPQIEEVIFSGGDPLMAKDHELDWLIKKLEKIPHLQRLRIHTRLPV 198

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI     + L E+     +  H NH  E  E+   A+++L NAG++LL+QSVLLK 
Sbjct: 199 VIPQRITGAFCKILTESRLNTVLVTHINHGNEIDEQLTRALNKLKNAGVVLLNQSVLLKN 258

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND+ + L NL        I PYYLH  D   G SHF +  +   +I   L+   SG   
Sbjct: 259 INDNAQTLKNLSDKLFRAGILPYYLHLLDKVEGASHFYVPDQRAVEIYRELQSLTSGYLV 318

Query: 307 PFYILDLPGGYGKV 320
           P    ++     K 
Sbjct: 319 PKLAREIAHEPNKT 332


>gi|190575198|ref|YP_001973043.1| putative methylase protein [Stenotrophomonas maltophilia K279a]
 gi|190013120|emb|CAQ46752.1| putative methylase protein [Stenotrophomonas maltophilia K279a]
          Length = 346

 Score =  376 bits (967), Expect = e-102,   Method: Composition-based stats.
 Identities = 101/321 (31%), Positives = 157/321 (48%), Gaps = 2/321 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL  + L   Q L     +    +   +     +++ +       +   +P DP+ RQ +
Sbjct: 28  QLWRQALRDPQALLARLQLDPAALGVSEAAMAQFALRVPEGFVARMRKGDPADPLLRQVL 87

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE+   P    D +GD       G++ +Y  R LL     C + CR+CFRR      
Sbjct: 88  PIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCRYCFRRHF--DY 145

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                +    + A+A I     I EVI +GGDPL L+  +L ++   LR I H++ LR H
Sbjct: 146 GAENAAKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDALRAIPHIRRLRIH 205

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +R+PIV P+R++ EL+  L     P+ I +HANH  EF     AA++RL   G  LL+Q+
Sbjct: 206 TRLPIVLPERVDDELVSWLGSLPWPLAIVVHANHANEFDASVDAAMARLRGIGAQLLNQA 265

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+ND  + L +L        + PYYLH  D   G +HF +     + ++A L  ++
Sbjct: 266 VLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTRAKALIAGLTARL 325

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
           SG   P  + +LPG   K  +
Sbjct: 326 SGYLVPKLVRELPGDPSKRPV 346


>gi|260913742|ref|ZP_05920218.1| KamA family protein [Pasteurella dagmatis ATCC 43325]
 gi|260632281|gb|EEX50456.1| KamA family protein [Pasteurella dagmatis ATCC 43325]
          Length = 337

 Score =  376 bits (966), Expect = e-102,   Method: Composition-based stats.
 Identities = 103/314 (32%), Positives = 156/314 (49%), Gaps = 3/314 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            ++  + L N   +  E  ++       + + +       +   NP DP+  Q +   +E
Sbjct: 23  AISDPKLLLNTLNLPAEAFEKDIVARRLFPLRVPLPFVQRMEKGNPKDPLFLQVMSSADE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
              +     DP+ +   + +  ++H+Y +R+LL +   C V CR+CFRR    +      
Sbjct: 83  FIQVEGFTTDPL-EEQEAVVPSVLHKYHNRLLLMVKGGCAVNCRYCFRRHFPYADNKG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  + + AL YI  + +I EVIF+GGDPL+     L  ++K L  I H+Q LR H+R+P+
Sbjct: 140 NKVNWQKALDYIAIRPEIEEVIFSGGDPLMAKDHELNWLIKNLENIPHLQRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI PEL + L E+     +  H NHP E      AAI +L  AG++LL+QSVLLK 
Sbjct: 200 VIPQRITPELCKILSESRFQTVLVTHINHPNEIDTTLSAAIFKLKQAGVVLLNQSVLLKN 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD +IL  L      + I PYYLH  D   G SHF +  E+   I   L+   SG   
Sbjct: 260 INDDAQILKQLSDKLFSINILPYYLHLLDKVEGASHFYIEDEKALNIYKILQSITSGYLV 319

Query: 307 PFYILDLPGGYGKV 320
           P    ++     K 
Sbjct: 320 PKLAREIAKEPNKT 333


>gi|322514442|ref|ZP_08067484.1| KamA family protein [Actinobacillus ureae ATCC 25976]
 gi|322119649|gb|EFX91711.1| KamA family protein [Actinobacillus ureae ATCC 25976]
          Length = 333

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 91/307 (29%), Positives = 151/307 (49%), Gaps = 3/307 (0%)

Query: 14  LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
           L     +  ++ +        +++ +       +   + NDP+  Q +   EE   +   
Sbjct: 27  LLEHLELNPKEFETAITARKLFALRVPRPFVGKMRKGDKNDPLFLQAMSAAEEFLQMQGF 86

Query: 74  REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
            +DP+ +  HSP   I+H+Y +R+L  + + C + CR+CFRR     +  +       + 
Sbjct: 87  VKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDEVKS--GKAVWQQ 143

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
            L YI   +++ EVIF+GGDPL+     L  ++  L  I H++ LR H+R+P+V P RI 
Sbjct: 144 GLDYIAAHTELEEVIFSGGDPLMAKDSELNWLISALEQIPHIKTLRIHTRLPVVIPSRIT 203

Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
            +L   L ++   V I  H NHP E  E  +  +++L  A ++LL+QSVLLKGIND+ + 
Sbjct: 204 EQLCNRLSKSRLKVVIVTHINHPNEVDEVLVDRLNQLRQANVVLLNQSVLLKGINDNAQT 263

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
           L  L     +  + PYYLH  D   G SHF +  ++  +I   L+   SG   P    ++
Sbjct: 264 LKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYLVPKLAREI 323

Query: 314 PGGYGKV 320
                K 
Sbjct: 324 AREPNKT 330


>gi|109896769|ref|YP_660024.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
           atlantica T6c]
 gi|109699050|gb|ABG38970.1| L-lysine 2,3-aminomutase [Pseudoalteromonas atlantica T6c]
          Length = 341

 Score =  375 bits (964), Expect = e-102,   Method: Composition-based stats.
 Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 4/326 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q       +    L     +   +  +       + + +    A  I   +PND + +Q
Sbjct: 16  WQKELSSAFSDPVALLKYLDLDPTEFIDDIAARRLFPMRVPLPFAARIKKGDPNDALFKQ 75

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
             P ++E         DP+ +  +    G++H+Y  R+LL +   C V CR+CFRR    
Sbjct: 76  VFPSEKEFLTDLNYVLDPLQEQQNEK-PGVLHKYKSRVLLLVRGGCAVNCRYCFRRHFPY 134

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           S     L+  + +  L YI++   I EVI++GGDPL+     L  +   +  I H++ +R
Sbjct: 135 S--DNHLNKHEWQETLDYIKQDKNINEVIYSGGDPLMAKDDFLAWLTDEIAEITHIKRIR 192

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P RI P+LI+   +      + +H NHP E        +  L  AG+ LL+
Sbjct: 193 IHTRLPVVIPARITPQLIEWFTKTRLKPVMVLHINHPQEIDFALQEVLQELTKAGVTLLN 252

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q VLLK IND  ++   L     +  + PYYLH  D   G  HF    +  + I+A + +
Sbjct: 253 QGVLLKDINDSADVQVALSERLFDAGVMPYYLHVMDKVQGAQHFDQDDKIAKDIMAKMIK 312

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325
           ++ G   P  + ++ G  GK  ID +
Sbjct: 313 RLPGFLVPKLVREIGGQPGKTPIDLN 338


>gi|89092066|ref|ZP_01165021.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92]
 gi|89083801|gb|EAR63018.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92]
          Length = 337

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 105/323 (32%), Positives = 169/323 (52%), Gaps = 3/323 (0%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q L    +   + L     + +  +D  ++ S+ +S+ +     + I P NP DP+ RQ
Sbjct: 16  WQHLLSNAIDDPKALLEHLNLPQNLLDGAQKGSDLFSMKVPEPYLSRIEPGNPKDPLLRQ 75

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P  +EL  +     DP+ + + +   G++H+Y  R+LL L   C + CR+CFRR    
Sbjct: 76  VLPLNDELADVSGFVADPLAEMDANHSDGLIHKYKGRVLLILSGACAINCRYCFRRHFPY 135

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            +    L S+  +  L Y++    I EVIF+GGDPL  S  RL+++++ L  I H+  LR
Sbjct: 136 QEN--RLGSEQWQQVLNYLKSDPTISEVIFSGGDPLATSDNRLERMIRDLEEIPHLSRLR 193

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+PIV PQR+   L+Q L+++     + +HANHP E       +  R+ ++ I +L+
Sbjct: 194 IHSRLPIVIPQRVTDRLLQILRDSRFSTVMVLHANHPNELDGSTAESAKRMKDSHITVLN 253

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLKGIND  ++L  L     E  I PYYL   D   G +HF +  EE  K+   ++ 
Sbjct: 254 QAVLLKGINDQVDVLQQLSEKLFEQGILPYYLFTLDPVKGAAHFDIPDEEAVKLHQQMQA 313

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
            + G   P    ++PG   K  +
Sbjct: 314 VLPGYLVPKLAREIPGKTEKTLL 336


>gi|88812696|ref|ZP_01127943.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231]
 gi|88790112|gb|EAR21232.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231]
          Length = 339

 Score =  375 bits (963), Expect = e-102,   Method: Composition-based stats.
 Identities = 94/325 (28%), Positives = 163/325 (50%), Gaps = 3/325 (0%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q    + +    +L     +    ++  +  +  + + +       +   N  DP+ RQ
Sbjct: 17  WQQELARAVRDPAELLRLLELPATLLEPARRAARLFPLRVPRSYLARMERGNLEDPLLRQ 76

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   EL+  P    DP+GD   S   G++H+Y  R+LL     C + CR+CFRR    
Sbjct: 77  VLPLTAELDPAPGFVTDPVGDLGASKGAGVLHKYHGRVLLITTGACAINCRYCFRRHFPY 136

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +Q           +AL YI +++++ EVI +GGDPL L+ +RL +++  L  I H++ LR
Sbjct: 137 AQANAAAG--QWHSALRYIAQRTEVEEVILSGGDPLTLADRRLAQLVTQLVDIPHIRRLR 194

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P R+  EL++    +     + +H NH  E      +A+ RL  AG+ +L+
Sbjct: 195 IHTRLPVVLPARVTDELVEWFAGSRLQPIMVLHTNHANELDATVTSAVKRLREAGVTMLN 254

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+G+ND+   L  L +   +  I PYYLH  D  AG  HF +T +  +++   +  
Sbjct: 255 QTVLLRGVNDEAMALTALHQRLFDSGILPYYLHLLDRVAGARHFAITQDRARELHRQMAR 314

Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
           ++ G   P  + ++ G  GK  +  
Sbjct: 315 RLPGYLVPRLVQEIEGAPGKHWLPP 339


>gi|153206246|ref|ZP_01945509.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177']
 gi|154706630|ref|YP_001423526.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111]
 gi|212217836|ref|YP_002304623.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154]
 gi|120577376|gb|EAX34000.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177']
 gi|154355916|gb|ABS77378.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111]
 gi|212012098|gb|ACJ19478.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154]
          Length = 342

 Score =  374 bits (962), Expect = e-102,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  + +++  +L+N   +  + +     +++++++ +       +   NPNDP+  Q
Sbjct: 6   WQTQLKRAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQ 65

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +PQ  EL   P    DP+ +   + + G++H+Y  R+L+ L   C V+CR+CFRR    
Sbjct: 66  ILPQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPY 125

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            Q               Y++  S I EVI +GGDPL++  + L   +  ++ I  ++ LR
Sbjct: 126 EQN--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLR 183

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P+RI  EL+  L        + IH NHP E ++  I A+  L  + + LL+
Sbjct: 184 IHTRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLN 243

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLK +NDD + L +L     +  + PYYLH  D   G +HF ++ ++ Q  +A + +
Sbjct: 244 QSVLLKNVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMK 303

Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
            + G   P ++ ++PG   K  + 
Sbjct: 304 HLPGYLVPKFVREIPGALSKTPLS 327


>gi|94500575|ref|ZP_01307106.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65]
 gi|94427365|gb|EAT12344.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65]
          Length = 345

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 114/331 (34%), Positives = 170/331 (51%), Gaps = 4/331 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  +   SAQDL     +  E ++  +  +  + I +     + I P NP DP+  Q
Sbjct: 17  WQKQLSQAQISAQDLLEQLSMPLELLEGAELGAAQFPIRVPQSFIDRIEPGNPQDPLFLQ 76

Query: 60  FIPQKEELNILP-EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
             P   E    P     DP+ +N  +P+ GIVH+Y  R+LL +   C ++CR+CFRR   
Sbjct: 77  IWPFSAEGETPPLGFVTDPLEENAANPVPGIVHKYQGRVLLIVNGSCAIHCRYCFRRHFP 136

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
                  LS  + E AL YI+    I EVI +GGDPL  + KRL K++  +  I HV  L
Sbjct: 137 YEDNNLSLS--EWEQALTYIENNPSINEVIMSGGDPLSSNDKRLFKLIDAIEAIPHVTRL 194

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R HSR+PI  P RI P+L Q L  +   + + +HANH  E S++  +A++RL +  I LL
Sbjct: 195 RIHSRLPITLPNRITPDLCQRLGSSRLNIVMVVHANHGNEISQDVHSAMTRLRSENIHLL 254

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKGIND  + L +L        + PYYLH  D   G  H+ +  +    ++  L+
Sbjct: 255 NQTVLLKGINDTTQALIDLSEQLFAAGVMPYYLHLLDPVIGAHHYHVATDVALSLMDQLQ 314

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
            ++ G   P  + ++PG   K  I T    K
Sbjct: 315 AQLPGFLVPKLVREVPGEASKTLIYTQKPPK 345


>gi|29655147|ref|NP_820839.1| radical SAM domain-containing protein [Coxiella burnetii RSA 493]
 gi|161831507|ref|YP_001597682.1| KamA family protein [Coxiella burnetii RSA 331]
 gi|29542416|gb|AAO91353.1| lysine 2,3-aminomutase [Coxiella burnetii RSA 493]
 gi|161763374|gb|ABX79016.1| KamA family protein [Coxiella burnetii RSA 331]
          Length = 342

 Score =  374 bits (961), Expect = e-101,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  + +++  +L+N   +  + +     +++++++ +       +   NPNDP+  Q
Sbjct: 6   WQTQLKRAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQ 65

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +PQ  EL   P    DP+ +   + + G++H+Y  R+L+ L   C V+CR+CFRR    
Sbjct: 66  ILPQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPY 125

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            Q               Y++  S I EVI +GGDPL++  + L   +  ++ I  ++ LR
Sbjct: 126 EQN--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLR 183

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P+RI  EL+  L        + IH NHP E ++  I A+  L  + + LL+
Sbjct: 184 IHTRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLN 243

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLK +NDD + L +L     +  + PYYLH  D   G +HF ++ ++ Q  +A + +
Sbjct: 244 QSVLLKNVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMIK 303

Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
            + G   P ++ ++PG   K  + 
Sbjct: 304 HLPGYLVPKFVREIPGALSKTPLS 327


>gi|212211887|ref|YP_002302823.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212]
 gi|212010297|gb|ACJ17678.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212]
          Length = 342

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  + +++  +L+N   +  + +     +++++++ +       +   NPNDP+  Q
Sbjct: 6   WQTQLKRAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQ 65

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +PQ  EL   P    DP+ +   + + G++H+Y  R+L+ L   C V+CR+CFRR    
Sbjct: 66  ILPQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPY 125

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            Q               Y++  S I EVI +GGDPL++  + L   +  ++ I  ++ LR
Sbjct: 126 EQN--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLR 183

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P+RI  EL+  L        + IH NHP E ++  I A+  L  + + LL+
Sbjct: 184 IHTRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLN 243

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLK +NDD + L +L     +  + PYYLH  D   G +HF ++ ++ Q  +A + +
Sbjct: 244 QSVLLKNVNDDSKALIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMK 303

Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
            + G   P ++ ++PG   K  + 
Sbjct: 304 HLPGYLVPKFVREIPGALSKTPLS 327


>gi|327538979|gb|EGF25616.1| KamA family protein [Rhodopirellula baltica WH47]
          Length = 381

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 106/319 (33%), Positives = 177/319 (55%), Gaps = 4/319 (1%)

Query: 6   KTLTSAQDLYNANLIKKE--QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           + + SA +L     +       D      + + + +    A  + P +PNDP+ RQ +P 
Sbjct: 65  RAIRSAGELRRYLNLDPPVGDPDGSDAEDHGFPVFVPLEFAARMKPGDPNDPLLRQVLPL 124

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
            EE N       DP+GD + +   G++H+Y  R L      C ++CR+CFRRE   S+  
Sbjct: 125 PEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITTGACGIHCRYCFRREFPYSENS 184

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
           +       E AL Y++E   I EV+ +GGDPL L+   + K+++ +  I HV+ LR+H+R
Sbjct: 185 SR--GDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSVAKLMQQIESIPHVRRLRWHTR 242

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           +PIV P R+    I+ ++ +    ++ +H NHP E   E  AA+ RL +AGI +L+Q+VL
Sbjct: 243 MPIVIPSRVTDAWIERMQASRLTSWVVVHCNHPAELDSETGAALMRLVDAGIPVLNQAVL 302

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+NDD ++L +L R  ++LR+ PYYLH  D   G +HF +  E G+ +V+ L+ ++ G
Sbjct: 303 LRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAHFEVDQECGRALVSQLESRLPG 362

Query: 304 LCQPFYILDLPGGYGKVKI 322
              P ++ +  G   K ++
Sbjct: 363 FAVPRFVCEQAGQASKTRL 381


>gi|165919300|ref|ZP_02219386.1| KamA family protein [Coxiella burnetii RSA 334]
 gi|165917023|gb|EDR35627.1| KamA family protein [Coxiella burnetii RSA 334]
          Length = 342

 Score =  373 bits (959), Expect = e-101,   Method: Composition-based stats.
 Identities = 96/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  + +++  +L+N   +  + +     +++++++ +       +   NPNDP+  Q
Sbjct: 6   WQTQLKRAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQ 65

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +PQ  EL   P    DP+ +   + + G++H+Y  R+L+ L   C V+CR+CFRR    
Sbjct: 66  ILPQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPY 125

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            Q               Y++  S I EVI +GGDPL++  + L   +  ++ I  ++ LR
Sbjct: 126 EQN--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLR 183

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P+RI  EL+  L        + IH NHP E ++  I A+  L  + + LL+
Sbjct: 184 IHTRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLN 243

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLK +NDD + L +L     +  + PYYLH  D   G +HF ++ ++ Q  +A + +
Sbjct: 244 QSVLLKNVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMK 303

Query: 300 KISGLCQPFYILDLPGGYGKVKID 323
            + G   P +I ++PG   K  + 
Sbjct: 304 HLPGYLVPKFIREIPGALSKTPLS 327


>gi|312110886|ref|YP_003989202.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp.
           Y4.1MC1]
 gi|311215987|gb|ADP74591.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp.
           Y4.1MC1]
          Length = 378

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 118/343 (34%), Positives = 188/343 (54%), Gaps = 18/343 (5%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           + K +T+ + +     I KE+ +++K+I+N Y   +     NLIN  +PNDPI +  IP 
Sbjct: 3   QPKYITNIEKITQ---IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPN 59

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
           + ELN       D   +  +  + G  H+Y    LL +  VC  YCRFCFR+ +  S   
Sbjct: 60  EGELNE--YGSWDASDEEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVK 117

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
             +S  D    + YI +  +I  V+ TGGD LIL+ K+++++++ LR I HV+I+RF S+
Sbjct: 118 EAMS--DVTPGIEYIAQTPEINNVLLTGGDSLILATKKIRQIVERLRAIDHVKIIRFGSK 175

Query: 184 VPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           +P+ +P RI  + EL+   ++     K +Y+  H NHP E +EEA  A   L +AG+I++
Sbjct: 176 LPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVV 235

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+ +LKGINDDPE+LA L+       + PYY       AG S F LT+E+  +IV   K
Sbjct: 236 NQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEKVYQIVEQAK 295

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
            + SGL +   ++ +    GK++I       + NG   +  H 
Sbjct: 296 ARTSGLGKRVRLV-MSHSSGKIEI-----LAIENGKAYLKYHQ 332


>gi|170718464|ref|YP_001783679.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus
           2336]
 gi|168826593|gb|ACA31964.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus
           2336]
          Length = 337

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 102/315 (32%), Positives = 154/315 (48%), Gaps = 3/315 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K ++   +L N   +  E           + + +       +   NPNDP+  Q +  + 
Sbjct: 22  KAISDPIELLNCLELPIESFQYDIAARQLFPLRVPFPFVKKMEKGNPNDPLFLQVMASQH 81

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E   +    +DP+ +  H+ +  I+H+Y +R+LL + + C V CR+CFRR    ++    
Sbjct: 82  EFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCRYCFRRHFPYAENKG- 139

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            + +    +L YI   ++I EVIF+GGDPL+     L  ++K L  I H+  LR H+R+P
Sbjct: 140 -NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKELENIPHLHTLRIHTRLP 198

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V PQRI  EL + L E+     I  H NHP E  E    A+ +L +A + LL+QSV+LK
Sbjct: 199 VVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKKLKHANVTLLNQSVVLK 258

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
            IND+  IL  L      + I PYYLH  D   G SHF L  E    I   L+   SG  
Sbjct: 259 NINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDESAAAIYKELQRISSGYL 318

Query: 306 QPFYILDLPGGYGKV 320
            P    ++     K 
Sbjct: 319 VPKLAREIAHEPNKT 333


>gi|293391874|ref|ZP_06636208.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290952408|gb|EFE02527.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 343

 Score =  372 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 3/314 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           ++  + L     +  E   +  E    +++ +       +   N  DP+  Q +   +E 
Sbjct: 28  ISDPKILLQHLELPLEPFKQDIEARKLFAMRVPLPFVAKMEKGNARDPLFLQVMSFADEF 87

Query: 68  NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
                  +DP+ +    + +  I+H+Y +R+L  +   C V CR+CFRR     Q     
Sbjct: 88  LQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYDQNKG-- 145

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YI    +I EVI +GGDPL+     +  ++K L  + H+  LR HSR+P+
Sbjct: 146 NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKHLENLPHLTRLRIHSRLPV 205

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI  +    L +      +  H NH  E  E+   A+ +L N G++LL+QSVLLK 
Sbjct: 206 VIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMDKLKNCGVVLLNQSVLLKN 265

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD  IL  L      + I PYYLH  D   G +HF L   +  +I   L+   SG   
Sbjct: 266 VNDDAHILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDAQALRIYKQLQRITSGYLV 325

Query: 307 PFYILDLPGGYGKV 320
           P    ++ G   K 
Sbjct: 326 PKLAREIGGEPNKT 339


>gi|332289569|ref|YP_004420421.1| conserved hypothetical protein, radical SAM superfamily
           [Gallibacterium anatis UMN179]
 gi|330432465|gb|AEC17524.1| conserved hypothetical protein, radical SAM superfamily
           [Gallibacterium anatis UMN179]
          Length = 332

 Score =  372 bits (957), Expect = e-101,   Method: Composition-based stats.
 Identities = 99/294 (33%), Positives = 142/294 (48%), Gaps = 3/294 (1%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
                +++ +     N +   N NDP+  Q +    E    P   +DP+ +   + +  +
Sbjct: 42  AARRLFAMRVPMPFINKMEKGNANDPLFLQVMTDAAEFLQTPGFVKDPLQEQ-DNAIPNL 100

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           +H+Y +R+LL +   C V CR+CFRR           +       L YI + S+I EVIF
Sbjct: 101 LHKYHNRVLLMVKGGCAVNCRYCFRRHFPYEANPG--NKASWRKTLDYIAQHSEIEEVIF 158

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL+   + L  +L+ L  I H++ +R HSR+P+V PQRI PEL + L ++     +
Sbjct: 159 SGGDPLMAKDRELAWLLEQLNQIPHLKTVRIHSRLPVVIPQRITPELCRSLADSPLNKVL 218

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
            +H NH  E  E     +  L  AG+ LL+QSVLLKGINDD  IL  L        I PY
Sbjct: 219 VLHINHANEIDELLSRQLQPLKQAGVTLLNQSVLLKGINDDAHILKALNDKLFATGILPY 278

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           YLH  D   G SHF +  E    I   L    SG   P    ++ G   K    
Sbjct: 279 YLHLLDKVEGASHFWIDDERALAIYRQLITLSSGYLVPKLAREIAGEKSKTWYS 332


>gi|294495163|ref|YP_003541656.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
 gi|292666162|gb|ADE36011.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219]
          Length = 358

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 101/354 (28%), Positives = 191/354 (53%), Gaps = 14/354 (3%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q+ ++ + S + L     + + + + IK +  H     TP  A+L++  +P  PI +Q +
Sbjct: 8   QITNQ-INSLEKLEEIINLTESEREAIKTLDTH--WGTTPYFASLMDKDDPECPIRKQVV 64

Query: 62  PQKEELNILPEEREDPIGDNNHS----PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           P  +E +     ++  +   N +        I  +Y DR+   +   C +YCR CFR+E+
Sbjct: 65  PSLQESHNKYGMKDYLVWKENRATEEVRPDSIARQYKDRVAFTVFQECGIYCRHCFRKEL 124

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
           V S    +    + +  + +I++  ++ +V+ TGGDPL+LS ++++ ++++LR I HV++
Sbjct: 125 VVSHDLKL--DFNVDDGIEWIRQHPEVRDVLITGGDPLLLSDEKIEYIIESLRDIPHVEM 182

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           +R  SR+PIV P RI   L + L      P+++    NHP E +++   A+  L +AG+ 
Sbjct: 183 IRIGSRLPIVLPHRITDNLKRILGGYHDVPIWLNTQCNHPKEITDKTKRAVYDLVSAGVN 242

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA- 295
           + +Q+VLLKGINDD + + +L +  +  RI+PYYL + + A G  HFR  +E+G +++  
Sbjct: 243 VGNQAVLLKGINDDVQTIRDLHQKLLTARIRPYYLFYCEPAPGIDHFRTPVEKGAELIRD 302

Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYP 348
            L+   +GL QP Y+  +    GK+ +   + +       Y + +H   + + P
Sbjct: 303 GLRGHTTGLAQPMYV--IATNVGKIPLMPDYYMVDKDEEKYVLRNHRGELTEIP 354


>gi|239827150|ref|YP_002949774.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70]
 gi|239807443|gb|ACS24508.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70]
          Length = 379

 Score =  372 bits (956), Expect = e-101,   Method: Composition-based stats.
 Identities = 119/343 (34%), Positives = 187/343 (54%), Gaps = 18/343 (5%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           + K +T+ + +     I KE+ +++KEI+N +   +     NLIN  +PNDPI +  IP 
Sbjct: 4   QPKYITNIEKITQ---IPKEEREKLKEITNKFVFRVNDYYLNLINWDDPNDPIRKLVIPN 60

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
           + ELN       D   +  +  + G  H+Y    LL +  VC  YCRFCFR+ +  +   
Sbjct: 61  EGELNE--YGSWDASDEAANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRNDVK 118

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
             +S  D    + YI +  +I  V+ TGGD LIL+ K+++ +++ LR I HV+I+RF S+
Sbjct: 119 EAMS--DVTPGIEYIAQTPEINNVLLTGGDSLILATKKIRYIVERLRAIDHVKIIRFGSK 176

Query: 184 VPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           +P+ +P RI  + EL+   ++     K +Y+  H NHP E +EEA  A   L +AG+I++
Sbjct: 177 LPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVV 236

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+ +LKGINDDPE+LA L+       + PYY       AG S F LT+EE  KIV   K
Sbjct: 237 NQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEEVYKIVEQAK 296

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
            + SGL +   ++ +    GK++I       + NG   +  H 
Sbjct: 297 ARTSGLGKRVRLV-MSHSSGKIEI-----LAIENGKAYLKYHQ 333


>gi|120555694|ref|YP_960045.1| lysine 2,3-aminomutase YodO family protein [Marinobacter aquaeolei
           VT8]
 gi|120325543|gb|ABM19858.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8]
          Length = 355

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 102/324 (31%), Positives = 161/324 (49%), Gaps = 3/324 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNPNDPIARQF 60
           Q+  +++T+ + L     +  E         +  + I +       I   NP+DP+ RQ 
Sbjct: 32  QILSQSVTTPEQLLERLGLAPEDWFRGAACGHRLFPIRVPEPYLARIEQGNPDDPLLRQV 91

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E  I P+   DP+ + +     G++ +Y  R LL +   C + CR+CFRR     
Sbjct: 92  LPVAQEAEIHPDFVSDPLEEASAIQTTGLIRKYTSRALLMITGQCAINCRYCFRRHFPYG 151

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                L  +D    +  +    +I EVIF+GGDPL ++ + L +  + L  I H++ LR 
Sbjct: 152 DH--RLGPEDRRQVIDSLSASPEINEVIFSGGDPLAVNDRLLSQWAELLGDIPHLRRLRI 209

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           HSR+P+V PQR+   LI  L        + +H NHP E  +    A  RL+ AG+ LL+Q
Sbjct: 210 HSRLPVVIPQRVCDSLIDWLSRTRLQKVLVVHVNHPAEIDQATRQAFRRLSEAGVTLLNQ 269

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SV+LKG+ND    L+ L  T  E  + PYYLH  D  +G  HF ++  +  +IV  + E 
Sbjct: 270 SVILKGVNDSSATLSALSETLFEAGVMPYYLHAFDPVSGARHFSVSDTDAIRIVNEMLEN 329

Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324
           + G   P  + +LPG   K  +D 
Sbjct: 330 LPGFLVPKLVRELPGRASKTPLDL 353


>gi|113461431|ref|YP_719500.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT]
 gi|112823474|gb|ABI25563.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT]
          Length = 337

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 102/315 (32%), Positives = 154/315 (48%), Gaps = 3/315 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K ++   +L N   +  E           + + +       +   NPNDP+  Q +  + 
Sbjct: 22  KAISDPIELLNYLELPIESFQYDIAARQLFPLRVPFPFVKKMEKGNPNDPLFLQVMASQH 81

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E   +    +DP+ +  H+ +  I+H+Y +R+LL + + C V CR+CFRR    ++    
Sbjct: 82  EFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCRYCFRRHFPYAENKG- 139

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            + +    +L YI   ++I EVIF+GGDPL+     L  ++K L  I H+  LR H+R+P
Sbjct: 140 -NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKELENIPHLHTLRIHTRLP 198

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V PQRI  EL + L E+     I  H NHP E  E    A+ +L +A + LL+QSV+LK
Sbjct: 199 VVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKKLKHANVTLLNQSVVLK 258

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
            IND+  IL  L      + I PYYLH  D   G SHF L  E    I   L+   SG  
Sbjct: 259 NINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDESAAAIYKELQRISSGYL 318

Query: 306 QPFYILDLPGGYGKV 320
            P    ++     K 
Sbjct: 319 VPKLAREIAHELNKT 333


>gi|225175029|ref|ZP_03729026.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
           alkaliphilus AHT 1]
 gi|225169669|gb|EEG78466.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter
           alkaliphilus AHT 1]
          Length = 371

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 109/355 (30%), Positives = 185/355 (52%), Gaps = 14/355 (3%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q++++ + + + L     + +E+ D I+          TP   +L++  NP  PI RQ 
Sbjct: 6   WQMQNQ-VNTLEKLEEYIKVTEEEADAIRNCET--RWGTTPYFVSLMDKENPECPIRRQV 62

Query: 61  IPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
           IP K E      I          DN+      I  +Y DRI + + + C +YCR CFR+E
Sbjct: 63  IPSKHENVNEFGIENYLVYKENRDNHEQRPDTIARQYKDRIAMTITNHCGIYCRHCFRKE 122

Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
           +V  +   +    D +  L ++++  ++ EV+ TGGDP +L   +++ +++ LR + H++
Sbjct: 123 LVVDKSMQL--RFDVDEGLEWVRQHPELREVLITGGDPFLLPDDQIEYIIRKLREVPHIE 180

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI 235
           ++RF SR+PIV PQRI P L + L +  K P+++    NH  E +E    AI  L   G+
Sbjct: 181 MIRFGSRLPIVLPQRITPGLKKVLGQYHKVPIWVNTQCNHAKEITERTAQAIWDLLTCGV 240

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
            + +Q+VL+KGINDD      L +  + +RI+PYY+ + + A G  HFR  +E+G +++ 
Sbjct: 241 NVGNQAVLMKGINDDEHSFQQLHQKLLSIRIRPYYVFYLEPAPGIDHFRTPVEKGAELIR 300

Query: 296 S-LKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYP 348
             L+   SGL QP Y+  +    GKV +   + IK+     Y + +H       P
Sbjct: 301 DTLRGHTSGLAQPMYV--IATNIGKVPLMPDYYIKEKNEKEYILQNHRGETTTLP 353


>gi|21231711|ref|NP_637628.1| hypothetical protein XCC2273 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66768163|ref|YP_242925.1| hypothetical protein XC_1842 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188991300|ref|YP_001903310.1| Putative radical SAM superfamily protein [Xanthomonas campestris
           pv. campestris str. B100]
 gi|21113412|gb|AAM41552.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573495|gb|AAY48905.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733060|emb|CAP51258.1| Putative radical SAM superfamily protein [Xanthomonas campestris
           pv. campestris]
          Length = 342

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 100/321 (31%), Positives = 163/321 (50%), Gaps = 2/321 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL  + +   ++L     +  +     ++ +  +++ +       + P +  DP+ RQ +
Sbjct: 24  QLWRQAVRDPRELLALLGLDAQAAGISEDAAAQFAVRVPRSFVARMRPGDLTDPLLRQVL 83

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E+ ++P    D +GD       G++ +Y  R LL     C V+CR+CFRR    ++
Sbjct: 84  PLDAEMRVVPGFALDAVGDGAARTTTGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +    +      A+A I     I EV+ +GGDPL L+  +L ++   L  I H++ LR H
Sbjct: 144 E--TAARDGWREAVAAIAADPDIDEVLLSGGDPLSLTTPKLAELTDALAAIPHLKRLRIH 201

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P+R++  L+  L+    PV   IHANH  EF  E  AA+  L  AG  LL+Q+
Sbjct: 202 SRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFDAEVDAALHALRGAGAQLLNQA 261

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+ND  + LA L        + PYYLH  D  AG +HF +     + + A L  ++
Sbjct: 262 VLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELATRL 321

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
           SG   P  + ++PG  GK  +
Sbjct: 322 SGYLVPRLVREIPGDTGKRPL 342


>gi|261868588|ref|YP_003256510.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413920|gb|ACX83291.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 343

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 3/314 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           ++  + L     +  E   +  E    +++ +       +   N  DP+  Q +   +E 
Sbjct: 28  ISDPKILLQHLELPLEPFKQDIEARKLFAMRVPLPFVAKMEKGNARDPLFLQVMSFADEF 87

Query: 68  NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
                  +DP+ +    + +  I+H+Y +R+L  +   C V CR+CFRR     Q     
Sbjct: 88  LQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYDQNKG-- 145

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++ + AL YI    +I EVI +GGDPL+     +  ++K L  + H+  LR HSR+P+
Sbjct: 146 NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKHLENLPHLTRLRIHSRLPV 205

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQRI  +    L +      +  H NH  E  E+   A+ +L N G++LL+QSVLLK 
Sbjct: 206 VIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMDKLKNCGVVLLNQSVLLKN 265

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD  IL  L      + I PYYLH  D   G +HF L   +  +I   L+   SG   
Sbjct: 266 VNDDAHILKVLSDRLFSVGILPYYLHLLDKVEGAAHFYLDDAQALRIYKQLQRITSGYLV 325

Query: 307 PFYILDLPGGYGKV 320
           P    ++ G   K 
Sbjct: 326 PKLAREIGGEPNKT 339


>gi|95930510|ref|ZP_01313245.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
 gi|95133345|gb|EAT15009.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
          Length = 365

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 105/357 (29%), Positives = 179/357 (50%), Gaps = 16/357 (4%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +    + + + L     +  ++   +++         TP  A+L++  +P  PI +Q
Sbjct: 12  WQQQLANFVNTIERLEQYVNLTDDERQILEQNKTT--WGTTPYFASLMDADDPQCPIRKQ 69

Query: 60  FIPQKEELNILPEEREDPIG-----DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
            IP   E        +D +      D        I  +Y DR+   +   C +YCR CFR
Sbjct: 70  VIPSSLEQQNT-YGMDDYLMWKENRDTEEQRPDSIARQYKDRVAFTVTQTCGIYCRHCFR 128

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
           +E+V     T     + +  L +I +  ++ +V+ TGGDPL+L  +++  +++ LR I H
Sbjct: 129 KELVVDGDLTF--DFNVDDGLEWISQHPEVRDVLITGGDPLLLPDEKIAYLIERLRAIPH 186

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
           +Q++RF SRVPIV PQRI PEL   L      P+++    NHP E +E    A+  L   
Sbjct: 187 IQMIRFGSRVPIVLPQRITPELKNILGGNHKVPIWLNTQCNHPKELTEHTAQAVYDLMTC 246

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           G+ + +Q+VLLKGINDD E    L +  + +RI+PYY+ + + A G  HFR  +E+G ++
Sbjct: 247 GVNVGNQAVLLKGINDDVETFRELHQKLLRVRIRPYYVFYCEAAPGIDHFRTPVEKGAEL 306

Query: 294 VA-SLKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYP 348
           +  +L+   +GL QP Y++      GK+ +   + I    +  Y + +H   +   P
Sbjct: 307 IRDALRGHTTGLAQPMYVV--ATNIGKIPLMPDYYIVDKDDEQYTLRNHKGQITHLP 361


>gi|307824010|ref|ZP_07654237.1| lysine 2,3-aminomutase YodO family protein [Methylobacter
           tundripaludum SV96]
 gi|307734794|gb|EFO05644.1| lysine 2,3-aminomutase YodO family protein [Methylobacter
           tundripaludum SV96]
          Length = 336

 Score =  371 bits (954), Expect = e-101,   Method: Composition-based stats.
 Identities = 112/323 (34%), Positives = 172/323 (53%), Gaps = 3/323 (0%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  +   + +DL     +  + +      + ++ + +    A  +   NP+DP+ RQ
Sbjct: 15  WQQQLAEAFNNIEDLCRYLHLSPDDLPVSDIAAENFPLRVPLSFAACMEKGNPHDPLLRQ 74

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P KEEL   P    DP+GD   +   G++H+Y  R+L      C + CR+CFRR    
Sbjct: 75  VLPIKEELFAYPGFSNDPVGDLAAATQVGVLHKYHGRVLFINTGSCAINCRYCFRRNFPY 134

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +     LS +  +AA+  IQ+   I EVI +GGDPL+LS  RL ++++ L  IKH++ +R
Sbjct: 135 A--DLQLSKQKEDAAIQAIQDDPSISEVILSGGDPLLLSDSRLTRLIRQLDGIKHLKRIR 192

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+PIV P RI  E I  L ++ K + I +H NH  E S+  IAA + L N+GI L +
Sbjct: 193 IHSRLPIVLPARITDEFINTLTQSPKQIIIIVHCNHANEISDRVIAACASLKNSGITLFN 252

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+G+ND+ E+L  L        I PYYLH  D A GT HF ++  E   ++  ++ 
Sbjct: 253 QSVLLRGVNDNAEVLGELSEQLFSHGITPYYLHLLDKATGTGHFEVSEAEALALMHQVQA 312

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
            + G   P  + +  G   K  I
Sbjct: 313 ALPGYLVPKLVKEQAGATSKQTI 335


>gi|221133998|ref|ZP_03560303.1| lysine 2;3-aminomutase [Glaciecola sp. HTCC2999]
          Length = 351

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 162/319 (50%), Gaps = 6/319 (1%)

Query: 10  SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
           S   L N          E  +  + +++ +     +L+  ++ +DP+ +Q +P  +E  +
Sbjct: 30  SPDSLLNYLGFNASDFAEDHKARSLFALRVPRFFVDLMARNDLDDPLLKQVMPVADEFIV 89

Query: 70  LPEEREDPI----GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
            PE   DP+     +  ++  KG++H+Y +R+LL L   C V CR+CFRR     Q    
Sbjct: 90  DPEFSLDPLKEQVNETTNTSTKGMLHKYQNRVLLMLRGGCAVNCRYCFRRHFPYDQHHN- 148

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            + +D      +I+   +I EVI +GGDPL+ +   +  +   L  I  ++ +R H+R+P
Sbjct: 149 -NKQDWLDVFEHIKTDPKIDEVILSGGDPLMANDDYMAWICAQLETIPSIKRIRLHTRLP 207

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P R+ PEL+  L ++ K   + +H NHP E S E I  ++ L  AG+ +L+Q+VLLK
Sbjct: 208 VVLPYRVTPELLIALAQSSKQTIMVLHINHPKEISSELIQKVALLHEAGVTVLNQAVLLK 267

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GIND       L       RI+PYYLH  D   G +HF ++ +    I+  +  K SG  
Sbjct: 268 GINDSAHTQIALNEALFSARIQPYYLHMFDKVQGAAHFAISDKRAVNIMREVLTKQSGYM 327

Query: 306 QPFYILDLPGGYGKVKIDT 324
            P  + ++ G   K  +D 
Sbjct: 328 VPKLVREIGGESSKTPVDL 346


>gi|32471298|ref|NP_864291.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1]
 gi|32443139|emb|CAD71970.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1]
          Length = 381

 Score =  371 bits (953), Expect = e-100,   Method: Composition-based stats.
 Identities = 104/319 (32%), Positives = 177/319 (55%), Gaps = 4/319 (1%)

Query: 6   KTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           + + SA +L     +     + +      + + + +    A  + P +PNDP+ RQ +P 
Sbjct: 65  RAIRSAGELRRHLNLDLSAGESNGTNAEDHGFPVFVPLEFAARMKPGDPNDPLLRQVLPL 124

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
            EE N       DP+GD + +   G++H+Y  R L      C ++CR+CFRRE   S+  
Sbjct: 125 PEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITTGACGIHCRYCFRREFPYSENS 184

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
           +       E AL Y++E   I EV+ +GGDPL L+   + K+++ +  I HV+ LR+H+R
Sbjct: 185 SR--GDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSVAKLMQQIESIPHVRRLRWHTR 242

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           +PIV P R+    I  ++ +    ++ +H NHP E   E  AA+ RL +AG+ +L+Q+VL
Sbjct: 243 MPIVIPSRVTDAWIVRMQASRLTSWVVVHCNHPAELDSETGAALMRLVDAGVPVLNQAVL 302

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+NDD ++L +L R  ++LR+ PYYLH  D   G +HF +  E G+ +V+ L+ ++ G
Sbjct: 303 LRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAHFEVDQECGRALVSQLESRLPG 362

Query: 304 LCQPFYILDLPGGYGKVKI 322
              P ++ +  G   K ++
Sbjct: 363 FAVPRFVCEQAGQASKTRL 381


>gi|326794182|ref|YP_004312002.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea
           MMB-1]
 gi|326544946|gb|ADZ90166.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea
           MMB-1]
          Length = 336

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 96/320 (30%), Positives = 165/320 (51%), Gaps = 2/320 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + +T   +L     +  +        +  + + +     + I   N NDP+  Q +PQ +
Sbjct: 19  RAITQLPELLKELDLPADLAATHIGATKTFRLLVPRPYLSRIEKGNLNDPLLLQVLPQHQ 78

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL  +    +DP+ + NH+P K +VH+Y  R+L+    +C V CR+CFRR          
Sbjct: 79  ELADVEGYLKDPLQEANHTPQKALVHKYESRVLVITTGICAVNCRYCFRRHFPYGDNQ-- 136

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L+  + ++ + Y+     I EVI +GGDPL+L  K L + +++L  I H++ LR H+R+P
Sbjct: 137 LAQSEWQSVIDYVTNDKNINEVILSGGDPLMLKDKVLAERVRSLESIAHLKRLRIHTRLP 196

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P RI+ ELI  + ++   + +  H NH  E  +   +A+ RL   G+ LL+Q VLLK
Sbjct: 197 VVIPSRIDDELIYWMSQSRLSIVLVTHINHANEIDQAVESAMLRLKQIGVTLLNQGVLLK 256

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
            +ND  E   +L     ++ + PYY+   D  AG +HF + IE+ Q+++  + +K+ G  
Sbjct: 257 NVNDSVEAQVDLSNRLFQVGLLPYYMFTFDPVAGAAHFDIPIEDAQRLMGEVTKKLPGYL 316

Query: 306 QPFYILDLPGGYGKVKIDTH 325
            P    ++PG   K      
Sbjct: 317 VPKLAKEIPGRASKTVFAPQ 336


>gi|325107258|ref|YP_004268326.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
 gi|324967526|gb|ADY58304.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305]
          Length = 346

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 97/323 (30%), Positives = 169/323 (52%), Gaps = 3/323 (0%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  + +    +L     +  + +   +  SN + + +     N + P  P+DP+ RQ
Sbjct: 26  WQQQLSRAIRDPAELLERLQLPADLLPAARSASNDFPLLVPESFLNRMQPGEPDDPLLRQ 85

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P ++EL        D +GD+      G++ +Y  R L+  L  C V+CR+CFRR    
Sbjct: 86  ILPVEQELQPKQGFTTDAVGDDAARIAPGLLQKYHGRALMITLGTCAVHCRYCFRRHYPY 145

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                  S +  +  L  I ++  + E++ +GGDPL+L+ +RL +++  L  I H+Q LR
Sbjct: 146 --HDEPRSREQWQETLNVIADRPDLEEILLSGGDPLVLNDRRLGELIDDLAKIPHLQRLR 203

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P R+  + +  L++      + +HANHP E   +  A++ RL+ AG  +L+
Sbjct: 204 IHTRLPIVLPDRVTEQFLSLLQDTRLQPVVVVHANHPAEVVADCAASLKRLSRAGFPVLN 263

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+G+ND  +  A L R  +   + PYYLH  D   G +HF      G+ IV +LKE
Sbjct: 264 QAVLLRGVNDTVDTQAELCRRLINAGVLPYYLHQLDRIQGAAHFETDAALGKAIVQALKE 323

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++ G   P ++ ++ G   K ++
Sbjct: 324 RLPGYAVPRFVREIAGEPSKTEM 346


>gi|90020728|ref|YP_526555.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40]
 gi|89950328|gb|ABD80343.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40]
          Length = 346

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 98/332 (29%), Positives = 158/332 (47%), Gaps = 16/332 (4%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQID----------EIKEISNHYSIALTPVIANLINPH 50
            Q    +++  ++L +      E ++            ++ +  + + +T   A+ I P 
Sbjct: 9   WQ----SISWQEELSSLITDPAELLERLELPESLLESAQKANKLFPLRVTQSYASRIKPG 64

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           + +DP+ RQ +P   EL        DP+ + + +P  G++H+Y  R+LL     C + CR
Sbjct: 65  DVDDPLLRQVLPLGAELTSPASYTADPLAEQSFNPAPGVIHKYHGRVLLISASQCAINCR 124

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFRR      +    S  + + AL YI +   I EVI +GGDPL +S +++Q ++  + 
Sbjct: 125 YCFRRHF--DYQTNTPSRAEWQEALRYIADNESIDEVILSGGDPLAVSDRQMQWLVNQIA 182

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I HV  LR H+R+P+V P RI  EL+  L +      I +H NH  E  E     +  L
Sbjct: 183 VIPHVTRLRIHTRLPVVLPNRITSELVDTLVKTRLQCVIVVHINHAAEIDEHVHNRLKIL 242

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
             A I LL+QSVLLKG+ND    L +L +      I PYYLH  D   G +HF +     
Sbjct: 243 KKANITLLNQSVLLKGVNDSASCLVSLSKRLFSCGILPYYLHLLDKVTGAAHFDVDEASA 302

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             +   L   + G   P  + ++P    K  +
Sbjct: 303 IALHNHLLATLPGYLVPKLVREVPNAASKTAV 334


>gi|325294734|ref|YP_004281248.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065182|gb|ADY73189.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 351

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 113/340 (33%), Positives = 180/340 (52%), Gaps = 7/340 (2%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           + + + +     +  E+ +  K++++ Y    TP   +L         I R   P   E+
Sbjct: 12  VRNIESIEKFFPLTDEEKESFKKVTSIYPFLSTPYYLSLAVKS---CAIKRMIFPNIMEI 68

Query: 68  N--ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           +  I  +  EDP+ +        + HRYPDR+L+   + CP  CRFC R+     +K   
Sbjct: 69  SEAIQSKGEEDPLSEERDKKTLHLTHRYPDRVLVVTTNFCPTLCRFCMRKRNW-KKKTFF 127

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           +S  + E AL YI++   I +V+ +GGDPL L  +RL+K+L  L+ I HV+++R  +R P
Sbjct: 128 ISDTEIENALNYIRKNENIRDVLISGGDPLFLPIERLKKLLFGLKAIDHVEVVRVGTRAP 187

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +  P R+  + +  + E  + V++  H NHP E +E +  A+  L  AGI + +Q+VLLK
Sbjct: 188 VTLPHRLLDDDLLEVLEKAEKVWVNTHFNHPDEITELSKEAVKNLLKAGIPVNNQTVLLK 247

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GIND  +IL  L R   +++++PYYL H D   G  HF  +I +G KI+  L ++IS   
Sbjct: 248 GINDSADILEKLFRNLQKIKVRPYYLFHCDPVKGVMHFSTSITKGIKILEKLFKRISPFA 307

Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345
            P+Y +D PGG GKV+I     KK GN  Y     +    
Sbjct: 308 IPYYAVDGPGGKGKVQILPDRYKKEGN-FYIFRSFNGETF 346


>gi|292490713|ref|YP_003526152.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus
           halophilus Nc4]
 gi|291579308|gb|ADE13765.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus
           halophilus Nc4]
          Length = 336

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 3/323 (0%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q    + + + Q+L     +        +     + + +       +   +PNDP+ RQ
Sbjct: 14  WQTELARAVRNPQELLALIGLNHHPQLAGEATRRQFPLRVPRGYIARMKKGDPNDPLFRQ 73

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
             P   E  I P    DP+GD    P  G++ +Y  R+LL     C ++CR+CFRR    
Sbjct: 74  VFPLIAEDQISPGFSADPVGDLAAMPAPGVLQKYAGRVLLVTTGACAIHCRYCFRRHFPY 133

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +      +    + AL YI +     EVI +GGDPL L+  RL ++++ L  I HV+ LR
Sbjct: 134 ADH--NPAPSQWQQALQYIAQNPSTQEVILSGGDPLTLTDNRLTELVQALAAISHVKRLR 191

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P+R++  L+Q L+       + IHANH  E  +    A+  L+ AG  L +
Sbjct: 192 IHTRLPVVLPERVDSHLLQWLEHTSLQKVVVIHANHANELDDRVGEALEGLSRAGCRLFN 251

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+GIND    L +L  +  +  + PYYLH  D   G +HF +     Q +  +L+ 
Sbjct: 252 QTVLLRGINDRVSALCDLSESLFDAGVIPYYLHLLDRVQGAAHFEVDTPTAQCLHRTLRA 311

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++ G   P  + +L G   K+ +
Sbjct: 312 RLPGYLVPLLVQELAGAPSKLPL 334


>gi|152979756|ref|YP_001345385.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus
           succinogenes 130Z]
 gi|150841479|gb|ABR75450.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus
           succinogenes 130Z]
          Length = 340

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 97/314 (30%), Positives = 149/314 (47%), Gaps = 3/314 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            ++   +L     +  +           + + +       +   NP DP+  Q +   +E
Sbjct: 26  AVSDPVELLKMLNLSAQFSKRDFAARKLFPLRVPIPFITKMEKGNPQDPLLLQVMLSHQE 85

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
                   +DP+ +    P   I+H+Y +R+L  + + C V CR+CFRR    +Q     
Sbjct: 86  FLYAEGFNKDPL-EEQKMPAPNILHKYHNRLLFMVKNACAVNCRYCFRRHFPYNQSQG-- 142

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  +   A+ YI E  QI EVIF+GGDPL+     L  ++K L  I H+Q LR HSR+P+
Sbjct: 143 NKANWRQAIEYIAENPQIEEVIFSGGDPLMAKDHELDWLIKQLETIPHLQRLRIHSRLPV 202

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           + PQRI   L + L+ +     +  H NHP E  +    A+ RL  A + LL+QSVLLK 
Sbjct: 203 MIPQRITSALCRMLQNSRLKAVLVTHINHPNEIDDVLAQAMVRLKQARVELLNQSVLLKN 262

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+  +L  L     E+ I PYYLH  D   G +HF ++ E   KI   L+   SG   
Sbjct: 263 VNDNAAVLKTLSDNLFEIGILPYYLHLLDKVEGAAHFYVSDESAVKIYRDLQATTSGYLV 322

Query: 307 PFYILDLPGGYGKV 320
           P    ++     K 
Sbjct: 323 PKLAREIANEPNKT 336


>gi|257455683|ref|ZP_05620912.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60]
 gi|257446966|gb|EEV21980.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60]
          Length = 333

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 104/327 (31%), Positives = 168/327 (51%), Gaps = 6/327 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q     T+TS  +L  A  +    ID        + + +       +   + NDP+ +Q
Sbjct: 11  WQNAFSDTITSFAELGQALDLP---IDSFDSQVGQFPLKVPRRFVQKMGKGDINDPLLKQ 67

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P  +E   +     DP+ + + +P+KGI+H+Y  R+L+ +   C V CR+CFR+    
Sbjct: 68  VLPTFQETVQVTGFVTDPLDEQHANPVKGIIHKYASRVLIPVTGACVVNCRYCFRQHF-- 125

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                + +  D +A  AYI     + EVI +GGDPL LS++RL ++  TL  +  V  +R
Sbjct: 126 DYHENLPTHNDWQAISAYITAHPAVNEVILSGGDPLSLSNRRLLEIFTTLEALPQVHTIR 185

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+RVP++ P+R++  L+     +   + + IHANHP E  +E    + +   AG+ LL+
Sbjct: 186 IHTRVPVMIPERLDEPLLARFANSRCHIVMVIHANHPNEIDQETQIFLGKAKKAGVTLLN 245

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLK INDD   LA+L     +  + PYYLH  D  AG SHF ++ E+   +   L  
Sbjct: 246 QTVLLKSINDDANTLASLNEKLWQAGVLPYYLHVLDKVAGASHFYISDEQAVALYWELLA 305

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326
           K +G   P  + +LP    K  +D +N
Sbjct: 306 KCAGYLVPKLVRELPNKPFKTPVDLYN 332


>gi|194366516|ref|YP_002029126.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas
           maltophilia R551-3]
 gi|194349320|gb|ACF52443.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas
           maltophilia R551-3]
          Length = 346

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 99/321 (30%), Positives = 156/321 (48%), Gaps = 2/321 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL  + L     L     +    +    +    +++ +       +   +  DP+ RQ +
Sbjct: 28  QLWRQALRDPHALLARLQLDPAALGVSDQAMAQFALRVPEGFVARMRKGDAADPLLRQVL 87

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE+   P    D +GD       G++ +Y  R LL     C + CR+CFRR      
Sbjct: 88  PIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCRYCFRRHF--DY 145

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                +    + A+A I     I EVI +GGDPL L+  +L ++   LR I H++ LR H
Sbjct: 146 GAENAAKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDALRQIPHIRRLRIH 205

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +R+PIV P+R++ EL+  L     P+ I +HANH  EF     AA++RL   G  LL+Q+
Sbjct: 206 TRLPIVLPERVDEELLAWLGGLPWPLAIVVHANHANEFDASVDAAMARLRGTGAQLLNQA 265

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+ND  + L +L        + PYYLH  D   G +HF +   + + ++A L  ++
Sbjct: 266 VLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTQAKALIAGLTARL 325

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
           SG   P  + +LPG   K  +
Sbjct: 326 SGYLIPKLVRELPGDPSKRPL 346


>gi|308048213|ref|YP_003911779.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
 gi|307630403|gb|ADN74705.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
          Length = 340

 Score =  369 bits (949), Expect = e-100,   Method: Composition-based stats.
 Identities = 97/325 (29%), Positives = 164/325 (50%), Gaps = 4/325 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q    +   S  +L     +   +  +  E    + + +    A  + P +  DP+ RQ
Sbjct: 16  WQRELAEAYRSPVELLTDLQLDPAEFGQGLEARRLFPMLVPKAFAAAMRPGDAQDPLLRQ 75

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P  +E  +      DPIG+    P+ G++H+Y  R+LL L   C V CR+CFRR    
Sbjct: 76  VLPVGDEFLVADGFGPDPIGEQ-DGPMPGLLHKYQSRVLLMLRTGCAVNCRYCFRRHFPY 134

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +     + + +   A  YI   ++I E++ +GGDPL+     L +++     + H++ LR
Sbjct: 135 ADH--KVGAAELAQAHEYIASDTRINELLLSGGDPLMARDDHLAELVARFSDLPHLKRLR 192

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P RI  +L+  L +A   V + +H NHP E   E +A ++RL  AG+ LL+
Sbjct: 193 IHTRLPVVLPSRITDQLVSLLADAPWRVVMVLHINHPNELQPELVAGLARLKAAGVTLLN 252

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLKG+ND  + L  L     +  + PYYLH  D  AG +HF +  +  + ++A   +
Sbjct: 253 QAVLLKGVNDHADTLVALAEGLFDAGVLPYYLHLLDRVAGAAHFEVDEDRARALMAEQLQ 312

Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
           ++ G   P  + ++ G   K  ID 
Sbjct: 313 RLPGFLVPRLVREIAGEASKTPIDL 337


>gi|302340146|ref|YP_003805352.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
           DSM 11293]
 gi|301637331|gb|ADK82758.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae
           DSM 11293]
          Length = 374

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 131/361 (36%), Positives = 193/361 (53%), Gaps = 16/361 (4%)

Query: 1   MQ--LRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLINPHNPNDPIA 57
            Q  L+ + +T+  +L     ++ E+      E       ALT    +L+   +P  P+ 
Sbjct: 14  WQRELKER-VTNLDELERHLCLEDEERAWFDSEEERRLPFALTRHYLSLM-GDDPASPLR 71

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ IP+KEE + L  E  DP+ +  +SPL  ++HRY DR L      C +YCR CFRR  
Sbjct: 72  RQAIPRKEEFHFLSYESADPLCEQEYSPLPRLIHRYEDRALFLASDRCALYCRHCFRRHF 131

Query: 118 VGS---QKGTVLSSKDT-------EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
            G        V + KD        + A  Y++++ +I E++ +GGDPL+L    L +++ 
Sbjct: 132 TGGAGQGDREVKNRKDRRSLFEAAQDAACYLEKRPEIRELLLSGGDPLMLPDGTLFRLID 191

Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227
             R  +   ILR  +R+P V P RI P L + L     P+++    NHP E S  A+ A+
Sbjct: 192 LFRKHRPDLILRIGTRMPAVLPSRITPVLARELGR-RAPLFVVCQFNHPDEVSPPAVEAL 250

Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
           +RLA++GI +L+QSVLL+G+NDD E L  L    +  R+ PYYL   DLAAGTSH R  I
Sbjct: 251 ARLADSGIPILNQSVLLRGVNDDRETLKVLSGALLAARVIPYYLFQGDLAAGTSHLRAPI 310

Query: 288 EEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            +G  I+ SL++ +SGL  P Y +DLPGG GKV I    + +V      +    N +  Y
Sbjct: 311 LKGVSIMRSLRQCMSGLATPVYAVDLPGGGGKVSIPLDPVPRVEEREALLPGPDNRLWPY 370

Query: 348 P 348
           P
Sbjct: 371 P 371


>gi|152994930|ref|YP_001339765.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1]
 gi|150835854|gb|ABR69830.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1]
          Length = 340

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 95/318 (29%), Positives = 164/318 (51%), Gaps = 2/318 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q   + LTS  +L     + K    +  E   ++ + +     + I   N +DP+  Q +
Sbjct: 14  QHLSQALTSLPELIEHLGLPKNLAQQGIEAHQNFKLLVPRPYLSRIEYGNVHDPLLLQVL 73

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E+  +    +DP+ + +H+P K IVH+Y  R+L+     C V CR+CFRR    + 
Sbjct: 74  PSLAEMQKVAGYTKDPLEEADHNPQKAIVHKYKRRLLVITTGTCAVNCRYCFRRHFPYAD 133

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
               L+  + ++ + Y+++  +I EVI +GGDPL++    L   ++ L  +  ++ LR H
Sbjct: 134 NQ--LAQAEWQSVIDYLKDHPEINEVILSGGDPLMMKDSLLADKVRKLEALPQIKRLRIH 191

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P R+  ++++ +K +   + +  H NH  E  EE   A  +L +AG+ LL+Q 
Sbjct: 192 SRLPVVIPNRVCDDMLEWIKVSRLDIVMVWHINHANEMDEELANAAYKLKSAGVTLLNQG 251

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  E   NL        I PYY+   D   G +HF + IE+ Q+++  +  ++
Sbjct: 252 VLLKGVNDSVEAQVNLSEAVFSAGILPYYMFTLDPVEGAAHFDIAIEDAQELMGKVAAEL 311

Query: 302 SGLCQPFYILDLPGGYGK 319
            G   P    ++PG   K
Sbjct: 312 PGYLVPRLAKEIPGKPAK 329


>gi|148269938|ref|YP_001244398.1| lysine 2,3-aminomutase YodO family protein [Thermotoga petrophila
           RKU-1]
 gi|147735482|gb|ABQ46822.1| L-lysine 2,3-aminomutase [Thermotoga petrophila RKU-1]
          Length = 365

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 109/329 (33%), Positives = 183/329 (55%), Gaps = 19/329 (5%)

Query: 1   MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
           M++++ T +T  + L        E+ + +K I   Y         +LI+  +P+DPI + 
Sbjct: 1   MKVKYYTSITQVEQL------SPEERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKI 54

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P+++EL        D   + +++  KG+ H+YPD  L  +  VC  +CRFCFR+ +  
Sbjct: 55  VVPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFI 112

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +    V+  +D    L YI+   +I  V+ TGGDPL+LS ++L+K++ +LR I HVQI+R
Sbjct: 113 NVGAEVI--RDITPQLDYIRSHKEITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVQIIR 170

Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAG 234
             S++P  +P RI  +PEL++ +++     K +Y+    NHP E +EEAI A++ L +AG
Sbjct: 171 IGSKIPAFNPYRIIDDPELLRMIRKYSTKEKKIYVMTQFNHPKELTEEAIEAVNLLKDAG 230

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
            +L +Q+ LL+GIND PE L  L+     + + PYY+      +G   F + IEEG +I 
Sbjct: 231 AVLCNQTPLLRGINDSPETLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIF 290

Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKI 322
                 ISG+ +   Y+  +    GK++I
Sbjct: 291 TKAISNISGVAKRVRYV--MSHRTGKIEI 317


>gi|149910194|ref|ZP_01898840.1| hypothetical protein PE36_23316 [Moritella sp. PE36]
 gi|149806780|gb|EDM66744.1| hypothetical protein PE36_23316 [Moritella sp. PE36]
          Length = 337

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 93/317 (29%), Positives = 164/317 (51%), Gaps = 3/317 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            ++  + L     + +            + + +     + +   NP DP+  Q +P+++E
Sbjct: 23  AISDPRKLLFILELPEVSFQSDFAARQLFPMRVPQSFVDRMEKGNPKDPLFLQVMPKQQE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
                   +DP+ ++  + + G++H+Y +R+L  +   C + CR+CFRR           
Sbjct: 83  FIQQAGFIKDPLDEHE-AVVPGLLHKYTNRVLFIVRGGCAINCRYCFRRHFPYQDNSN-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +  + + A+ YI+ K +I EVIF+GGDPL+ + ++L  ++  L  I H++ LR H+R+P+
Sbjct: 140 NKHEWQQAIDYIRAKPEIIEVIFSGGDPLMANDEQLGWLVAQLEQIPHLKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P R+  EL+  LK++     + +H NHP E + E  AA+++   AGI L +Q+VLL  
Sbjct: 200 VMPTRVTDELVTLLKQSSLRCSVVLHINHPNELAAELPAALAKFTTAGISLYNQAVLLAD 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND+ + L  L     + RI+PYYLH  D   G SHF +  E+   I+  L  ++ G   
Sbjct: 260 INDNADDLVELHERLFDNRIQPYYLHLLDKVEGASHFDVPEEKAVAIMNELLLRLPGFLV 319

Query: 307 PFYILDLPGGYGKVKID 323
           P  + ++ G   K  I 
Sbjct: 320 PKLVREIGGEKSKTPIS 336


>gi|15615505|ref|NP_243809.1| hypothetical protein BH2943 [Bacillus halodurans C-125]
 gi|10175565|dbj|BAB06662.1| BH2943 [Bacillus halodurans C-125]
          Length = 393

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 113/349 (32%), Positives = 187/349 (53%), Gaps = 18/349 (5%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           + K + +   +     I KE+ +++K+I++ +   +     +LI+ ++PNDPI +  IP 
Sbjct: 3   QPKYIMNVDKIEQ---IPKEEREKLKQITDKFVFRVNDYYLSLIDWNDPNDPIRKLVIPN 59

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
           + EL+     R D   ++ +  + G  H+Y    LL    VC  YCR+CFR+ +  +   
Sbjct: 60  EGELSE--YGRWDASDEDTNYVVPGCQHKYETTALLICSEVCGAYCRYCFRKRLFRNDVK 117

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
             +S  D +  L YI +  QI  V+ TGGDPLIL+ K+L+ +++ LR I HV+I+R  S+
Sbjct: 118 EAMS--DVDPGLDYIAQTPQINNVLLTGGDPLILATKKLRYIIERLRAIDHVKIIRIGSK 175

Query: 184 VPIVDPQRINPE--LIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           +P+ +P RI  +  L++ ++E       +YI  H NHP E + EA  A   L +AG I++
Sbjct: 176 LPVFNPMRITEDEQLLELIREYSTPDHRIYIMAHINHPVEITNEARQAFQALHDAGAIVV 235

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+ +LKGINDDP++LA L+       + PYY       AG + F LT+EE   IV   K
Sbjct: 236 NQTPVLKGINDDPDVLAELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEVYNIVEKAK 295

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            K SGL +    L +    GK+++       + +G   +  H +   +Y
Sbjct: 296 AKTSGLGKRVR-LSMSHTSGKIEV-----LAIEDGKAYLKYHQSRDGNY 338


>gi|238898952|ref|YP_002924634.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229466712|gb|ACQ68486.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 345

 Score =  367 bits (944), Expect = e-99,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 160/319 (50%), Gaps = 4/319 (1%)

Query: 8   LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T    L +   + K  ++ +       + + +    A  + P +P DP+  Q +   +E
Sbjct: 23  ITDPLALLSFLKLDKNIKLRQGAYARALFPLRVPIAFAEKMTPGDPKDPLLLQVLTLSDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
                    DP+ +   + L G++H+Y +R+L+ +   C V+CR+CFRR           
Sbjct: 83  FVHTSGFSADPLCEQA-AVLPGLLHKYRNRVLMLIKGGCAVHCRYCFRRHFPYQNNKG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  + E    YI++ +++ EVIF+GGDPL+     L  ++  L  I H++ LR H+R+PI
Sbjct: 140 SQVNREQVFNYIRKHTELDEVIFSGGDPLMAKDPELASLITVLESIPHIKRLRIHTRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L +    +   + +  H NHP E  +    ++ RL  AG+ LL+Q+VLLK 
Sbjct: 200 VIPSRITTRLCESFSNSSLQILMVTHINHPNEMDQAVYNSMYRLKQAGVTLLNQTVLLKD 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +N++ EILA L        I PYYLH  D   G +HF +   E ++I+ +L  ++SG   
Sbjct: 260 VNNNAEILAQLSNRLFNAGILPYYLHLLDKVQGAAHFMVEEHEARQIMKALLGQVSGYLV 319

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++ G   K+ ID  
Sbjct: 320 PRLTREVAGQPSKIPIDLQ 338


>gi|71278705|ref|YP_267720.1| hypothetical protein CPS_0971 [Colwellia psychrerythraea 34H]
 gi|71144445|gb|AAZ24918.1| conserved hypothetical protein TIGR00238 [Colwellia psychrerythraea
           34H]
          Length = 342

 Score =  367 bits (944), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 97/325 (29%), Positives = 165/325 (50%), Gaps = 4/325 (1%)

Query: 1   MQLRHKTL-TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q   + + T  + L     I  +   +  +    + + +       +   + +DP+ +Q
Sbjct: 20  WQKDLRDVVTEPEKLLTLLNIAPDDYLQHFKARKLFPVRVPLSFIKRMKKGDFDDPLLKQ 79

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E  +      DP+ ++  +  +G++H+Y  R+L+ +   C + CR+CFRR    
Sbjct: 80  VMPLSSEFLLSDGYTADPLNEH-DTVAEGLLHKYKSRVLMIVKTACAINCRYCFRRHFPY 138

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +    + K  ++AL YI   ++I EVIF+GGDPL+ +   L  +++ +  I HV  LR
Sbjct: 139 --QDNSPNKKRWQSALDYIAAHNEISEVIFSGGDPLMANDDHLAWLIEQIEQIPHVSRLR 196

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+P+V P RI  +L+  LK +     + +H NHP E ++E I A+  L  A I L +
Sbjct: 197 IHSRLPVVIPNRITAKLVTLLKCSRLKATMVLHINHPNEINQELIEALEPLREARIPLFN 256

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+GINDD ++L NL     +  I+PYYLH  D   G +HF +   +   IV ++  
Sbjct: 257 QSVLLRGINDDAQVLINLSEALFDAGIQPYYLHLFDAVQGAAHFDIAEADAVAIVKTMLA 316

Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
            + G   P  + ++ G   K  I+ 
Sbjct: 317 SLPGFLMPKLVREIAGQANKTPINL 341


>gi|77166085|ref|YP_344610.1| hypothetical protein Noc_2627 [Nitrosococcus oceani ATCC 19707]
 gi|254435948|ref|ZP_05049455.1| KamA family protein [Nitrosococcus oceani AFC27]
 gi|76884399|gb|ABA59080.1| L-lysine 2,3-aminomutase [Nitrosococcus oceani ATCC 19707]
 gi|207089059|gb|EDZ66331.1| KamA family protein [Nitrosococcus oceani AFC27]
          Length = 335

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 100/322 (31%), Positives = 161/322 (50%), Gaps = 3/322 (0%)

Query: 1   MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q    + + + Q+L     +        +     + + +       +   +PNDP+ RQ
Sbjct: 14  WQAALSQAVRNPQELLELTGLDNHPQIASEATRRQFPLRVPRSYIARMKKGDPNDPLFRQ 73

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
             P   E  I P    DP+GD    P  G++ +Y  R+LL     C ++CR+CFRR    
Sbjct: 74  VFPLHAEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCRYCFRRHFPY 133

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                  + +  + AL YI +   I EVI +GGDPL L+  RL ++ +TL  I HV+ LR
Sbjct: 134 GDH--NPAQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLATISHVKRLR 191

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P+R++  L+Q L+       + IHANH  E  +   AA++ L+ AG  L +
Sbjct: 192 IHTRLPVVLPERVDHHLLQWLEGTSLQKVVVIHANHVNELDDRVAAALNDLSRAGCRLFN 251

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+GIND    L++L     +  + PYYLH  D   G +HF + I   Q++  +L+ 
Sbjct: 252 QTVLLRGINDKVSALSDLSEGLFDTGVLPYYLHLLDKVQGAAHFEVDIITAQRLHRTLRA 311

Query: 300 KISGLCQPFYILDLPGGYGKVK 321
           ++ G   P  + +  G   K+ 
Sbjct: 312 RLPGYLVPLLVQEQAGAPSKLP 333


>gi|93006773|ref|YP_581210.1| hypothetical protein Pcryo_1949 [Psychrobacter cryohalolentis K5]
 gi|92394451|gb|ABE75726.1| L-lysine 2,3-aminomutase [Psychrobacter cryohalolentis K5]
          Length = 335

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 101/327 (30%), Positives = 168/327 (51%), Gaps = 5/327 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  + +TS  +L     ++  + +    +  H+ + +       +   + +DP+ RQ
Sbjct: 11  WQTQLSEAITSIDELLEILELQSLRSEVY--VPKHFELRVPRAFVAKMTVGDRDDPLLRQ 68

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P  +E   +     DP+ +N H+P+KG++H+Y  R+LL +   C ++CR+CFR+    
Sbjct: 69  VLPNHKEQMAVAGYVADPLAENAHNPVKGVLHKYQSRLLLTITGACAIHCRYCFRQHFDY 128

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           S      S+K  +  + YI    +I EVI +GGDPL ++++RL   L TL  I  +  +R
Sbjct: 129 SANMPTASAK--QDIIDYISAHPEINEVILSGGDPLNVTNRRLFAWLDTLEAIGQLTTIR 186

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P R++  L++ L ++   + + IH NH  E        + R   AGI LL+
Sbjct: 187 IHTRLPLVIPARLDDALLERLAQSRCQIVMVIHGNHANEIDALTAEYLQRARAAGITLLN 246

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLKGIND       L +      + PYYLH  D  AG +HF    E   ++  SL  
Sbjct: 247 QAVLLKGINDSVSAQTALSQRLFAAGVLPYYLHVLDKVAGAAHFDSDEEFAIELYWSLLA 306

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326
           K+ G   P  + +LP    KV I+ +N
Sbjct: 307 KLPGYLVPKLVRELPNEPFKVPINVYN 333


>gi|285018690|ref|YP_003376401.1| lysine aminomutase [Xanthomonas albilineans GPE PC73]
 gi|283473908|emb|CBA16409.1| probable lysine aminomutase protein [Xanthomonas albilineans]
          Length = 315

 Score =  366 bits (941), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 98/317 (30%), Positives = 161/317 (50%), Gaps = 2/317 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +    +L     +  + +    E +  +++ +       +   +P+DP+ RQ +P   EL
Sbjct: 1   MRDPHELLALLGLDPQGLGISTEAATQFALRVPRGFVARMRHGDPHDPLLRQVLPLDAEL 60

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           + +P    D +GD       G++H+Y  R LL     C V+CR+CFRR    +++    +
Sbjct: 61  HRVPGFALDAVGDGAAKKADGVIHKYRGRALLVATGSCAVHCRYCFRRHFPYAEE--SAA 118

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
                 A+A I     I EVI +GGDPL L+  +L ++ + L  +  ++ LR HSR+P+V
Sbjct: 119 RDGWRDAVAAIAADPSIEEVILSGGDPLSLATPKLVELTEALTALPQIKRLRLHSRLPVV 178

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P+RI+  L+  L+    P+ + IHANH  EF     AA++RL +AG  LL+Q+VLL+G+
Sbjct: 179 LPERIDAPLLAWLRALPWPLAVVIHANHANEFDAAVDAALARLRDAGAQLLNQAVLLRGV 238

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND  E LA L        + PYYLH  D   G +HF +       +  +L  ++SG   P
Sbjct: 239 NDTVEALAKLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDATALDLHRALASRLSGYLVP 298

Query: 308 FYILDLPGGYGKVKIDT 324
             + ++PG   K  +  
Sbjct: 299 KLVREIPGDSSKRPLMP 315


>gi|281355041|ref|ZP_06241535.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis
           ATCC BAA-548]
 gi|281317921|gb|EFB01941.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis
           ATCC BAA-548]
          Length = 341

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 108/306 (35%), Positives = 170/306 (55%), Gaps = 4/306 (1%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDN 81
           E   E++ +   Y + L      LI+P +  NDPIARQ +P  +EL  L     DP+ + 
Sbjct: 17  EITPEMERVEPTYPVYLNDYYLGLIDPADWRNDPIARQSLPDPQELADLSS-SYDPLAEE 75

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQE 140
              P   ++HR+ DR++L     C + CRFCFR+       +   LS +    A+ Y+  
Sbjct: 76  EQMPTPHLIHRFVDRVVLLATGRCAMRCRFCFRKRAWTSGMELADLSDEQLAGAVGYLTA 135

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
              + EV+ +GGDPL+L   RL+ ++  +  +  +Q++R  SR+P+V P+R+  E+ +  
Sbjct: 136 HPAVKEVLISGGDPLMLPFGRLKAIVDAVAAVPSIQVIRIGSRMPVVWPERVTAEIAEYF 195

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                 ++ A H NHP E + EA AA  RL  AG+ +++QSVLLKG+NDD E+L  L R 
Sbjct: 196 GSIP-GLWFATHFNHPREVTPEAAAACGRLVRAGVPVVNQSVLLKGVNDDAELLEELFRK 254

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
            V +R+KP+YL H D   G  HF   +E+G +I+ + + ++S L  P + +DLP G GKV
Sbjct: 255 LVAIRVKPHYLFHVDPVRGVRHFATGVEKGLQILRAFRPRLSSLAVPTFAIDLPEGGGKV 314

Query: 321 KIDTHN 326
            +    
Sbjct: 315 ALQPEY 320


>gi|149196362|ref|ZP_01873417.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155]
 gi|149140623|gb|EDM29021.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155]
          Length = 341

 Score =  365 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 156/341 (45%), Positives = 222/341 (65%), Gaps = 8/341 (2%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHNPNDPIARQFIPQKEE 66
           + + + L    LI  +  D +  ++  + I+L+P VI N+  P      I +Q++P KEE
Sbjct: 4   IRNTKALQEQGLISADDTDLLNRVAEKFQISLSPEVIKNIAEPE-----IRQQYLPTKEE 58

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L I  EE  DPIGD   +P+KGI HRYPDR+LLK LH C VYCRFCFRRE VG Q   +L
Sbjct: 59  LEIQEEELNDPIGDEKFTPVKGITHRYPDRVLLKPLHTCNVYCRFCFRREKVG-QADEIL 117

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
              + E AL YI+E+ ++WEVI TGGDPL LS  +L  +L  L  I HV+++R H+R+P+
Sbjct: 118 KQDELENALNYIRERQEVWEVILTGGDPLSLSADKLASILDQLEAIDHVKVIRIHTRIPL 177

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P++I+ EL++ L +  K +Y+ +H N   E S+     I +L+ AGI LLSQSVLLK 
Sbjct: 178 VAPEKISDELLKVL-DREKALYMILHCNSHKELSDNVCFGIKKLSRAGIPLLSQSVLLKN 236

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND  E L  L R+ V +R++PYYLHHPDLA GTSHFR+++E+G+++ + L++ +SG+ Q
Sbjct: 237 INDSVEKLEKLFRSLVAIRVRPYYLHHPDLAQGTSHFRVSLEKGRQVTSELRKSLSGIAQ 296

Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           P Y+LD+PGG GKV      I+   + ++ I   H+   DY
Sbjct: 297 PLYVLDVPGGLGKVPAGKEFIQAKDDKTWKIQTIHDTFVDY 337


>gi|311695405|gb|ADP98278.1| lysine 2,3-aminomutase YodO family protein [marine bacterium HP15]
          Length = 346

 Score =  364 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 100/324 (30%), Positives = 162/324 (50%), Gaps = 3/324 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           QL    +TS ++L     + +E  +   ++    + I +     N +   NP DP+ RQ 
Sbjct: 23  QLLSGAVTSPKELLRRLELPEEPWLAGAEQGHRLFQIRVPEPFLNRMEKGNPADPLLRQV 82

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E    P    DP+ ++      G++ +Y  R LL +   C + CR+CFRR     
Sbjct: 83  LPLADEAGHAPGFVSDPLEESGAIATTGLIRKYRSRALLMVTGQCAINCRYCFRRHFPYD 142

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           ++   LS  D +  +  +    +I EVIF+GGDPL ++ + L +    +  I H++ LR 
Sbjct: 143 EQ--RLSPHDRQRVIDVLGASPEINEVIFSGGDPLAVNDRLLSQWASAISGIPHIRRLRL 200

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           H+R+P+V PQR+  EL++ L      V I +H NHP E       A+  L  AG  LL+Q
Sbjct: 201 HTRLPVVIPQRVCDELLKWLSTTPLQVVIVLHINHPAEIDGPTRRALGYLRAAGATLLNQ 260

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SV+L+G+ND   +L  L  T  +  + PYYLH  D   G  HF ++ +E + +V  L  +
Sbjct: 261 SVILRGVNDRTAVLEELSETLFDAGVLPYYLHAFDPVTGAHHFDVSDDEARNLVRELLAR 320

Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324
           + G   P  + + PG   K  I+ 
Sbjct: 321 LPGFLVPKLVREEPGKESKTPINL 344


>gi|262376096|ref|ZP_06069327.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145]
 gi|262309190|gb|EEY90322.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145]
          Length = 340

 Score =  364 bits (936), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 95/324 (29%), Positives = 161/324 (49%), Gaps = 4/324 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q +    +T  ++L     +  EQ+       S  + + +       +   NP DP+  
Sbjct: 11  WQSQLSDLITDPRELLEVLQLAPEQLLSGAILASEQFKLRVPRAFVGKMQVGNPLDPLLL 70

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +P   EL   P    DP+G+   +   G++H+Y  R LL L   C V+CR+CFRR   
Sbjct: 71  QVLPHHLELEEHPGFVTDPLGEEQANQQPGVLHKYKSRFLLTLTGACAVHCRYCFRRHFP 130

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +   +  ++D      Y++ +  I EVI +GGDPL LS+++L+  ++ L  + H++ L
Sbjct: 131 YQEN--LPKNEDWINIKQYLESQPDINEVILSGGDPLTLSNRKLKTWIERLESVPHLKFL 188

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R HSRVPIV P R++ EL+  LK +   + + +H+NH  E  +     +++L    I +L
Sbjct: 189 RIHSRVPIVIPNRVDEELLSMLKNSRLRIILVVHSNHASELDDFTCKRLNQLVQQQITVL 248

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLL G+ND  ++L +L     +  + PYYLH  D   G  HF L  +   +I   + 
Sbjct: 249 NQAVLLNGVNDSAQVLVDLSYRLFDAGVMPYYLHVLDKVKGAHHFDLAPDHINEIYTEVL 308

Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
             + G   P  + ++ G   K  +
Sbjct: 309 ANLPGYLVPKLVREIAGEKNKTPL 332


>gi|329894763|ref|ZP_08270564.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088]
 gi|328922752|gb|EGG30085.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088]
          Length = 335

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 103/323 (31%), Positives = 168/323 (52%), Gaps = 3/323 (0%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +    +  + +L  A  + +  +D I   +  +++         +   NP DP+  Q
Sbjct: 14  WQSILQTAIRDSAELLQAVGVPQSSLDTITGETAGFAVLAPRPFVARMEYGNPKDPLLLQ 73

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +  +EE+        DP+ +   +P+ GI+H+Y  R+LL     C V CR+CFRR    
Sbjct: 74  VLALQEEIAPNAVGTTDPLEEQRFTPVPGIIHKYFGRVLLMTAGTCAVNCRYCFRRH--N 131

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                +L+      AL Y++ +  I EVI +GGDPL+ S ++L +++  L  I H+Q LR
Sbjct: 132 DYAQNILTPARLNEALTYLRSQRDITEVILSGGDPLLTSDRKLSELVAELEAIPHIQRLR 191

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV PQRI  EL Q L ++   V + +H NHP E   E   A+++L   GI LL+
Sbjct: 192 IHTRLPIVIPQRITTELCQRLGQSRFQVTLVVHCNHPKELDVEVGLAMAQLKAQGITLLN 251

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLK IN+    L  L     ++ + PYYLH  D   G +HF   + + +++  +L+ 
Sbjct: 252 QTVLLKNINNCAATLETLSVELFKIGVLPYYLHTLDPVQGAAHFAQPMGDSKQLHQTLQA 311

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++ G   P  + ++PGG  K  I
Sbjct: 312 RLPGYLVPKLVSEIPGGASKTLI 334


>gi|300113201|ref|YP_003759776.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii
           C-113]
 gi|299539138|gb|ADJ27455.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii
           C-113]
          Length = 335

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 99/322 (30%), Positives = 162/322 (50%), Gaps = 3/322 (0%)

Query: 1   MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q    + + + Q+L     +        +     + + +       +   +PNDP+ RQ
Sbjct: 14  WQTALSQAVRNPQELLVLTGLDTHPQIASETTRRQFPLRVPRSYIARMKKGDPNDPLFRQ 73

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
             P   E  I P    DP+GD    P  G++ +Y  R+LL     C ++CR+CFRR    
Sbjct: 74  VFPLHAEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCRYCFRRHFPY 133

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                  + +  + AL YI +   I EVI +GGDPL L+  RL ++ +TL  I HV+ LR
Sbjct: 134 GDH--NPAQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLATISHVKRLR 191

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P+R++  L+Q L+E      + IHANH  E  +   AA++ L++ G  L +
Sbjct: 192 IHTRLPVVLPERVDNHLLQWLEETSLQKVVVIHANHVNELDDRVAAALNDLSHVGCRLFN 251

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+GIND    L++L     +  + PYYLH  D   G +HF + +   Q++  +L+ 
Sbjct: 252 QTVLLRGINDKVGALSDLSEGLFDAGVLPYYLHLLDKVQGAAHFEVDLMSAQRLHRTLRA 311

Query: 300 KISGLCQPFYILDLPGGYGKVK 321
           ++ G   P  + +  G   K+ 
Sbjct: 312 RLPGYLVPLLVQEQAGAPSKLP 333


>gi|94676743|ref|YP_589018.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
 gi|94219893|gb|ABF14052.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca
           coagulata)]
          Length = 339

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 97/319 (30%), Positives = 161/319 (50%), Gaps = 5/319 (1%)

Query: 8   LTSAQDLYNANLIKKEQ--IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +T+  +L     + +++   + IK     +   +       +   +P DP+ RQ +   E
Sbjct: 23  ITNPMELLQQLKLDQDKKLREAIK-ARQLFPFRVPKTFVKRMKYEDPTDPLLRQVLTLPE 81

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E     +  +DPI +  ++    ++H+Y +R +L +   C + CR+CFRR        + 
Sbjct: 82  EFKQHLDFSKDPINEQQYNVAPMLLHKYYNRAILLVKSGCAINCRYCFRRYFPYQDNQS- 140

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            +  + + A+ YI++ S++ E+I +GGDPL+     L K+L  L  I H+  LR HSR+ 
Sbjct: 141 -NQANWKLAIEYIKQHSELNEIILSGGDPLMAKDHELDKLLNLLEDIPHLTKLRIHSRLL 199

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           IV P RI   + Q L  +   V +  H NH  E       +I++L N  + LL+QSVLL+
Sbjct: 200 IVIPARITSFICQRLARSRLKVVLVTHINHAQEIDSSVQKSIAKLRNKQVTLLNQSVLLR 259

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GIND+ +ILA L  T   + I PYYLH  D   G +HF +  +  +KI+  L  K++G  
Sbjct: 260 GINDNAQILATLSETLFSIGILPYYLHTLDCVQGATHFIVDDQRARKIMHDLLSKVAGYL 319

Query: 306 QPFYILDLPGGYGKVKIDT 324
            P  + D+ G   K  +  
Sbjct: 320 VPRLVRDISGMPSKTILSL 338


>gi|56461377|ref|YP_156658.1| lysine 2,3-aminomutase [Idiomarina loihiensis L2TR]
 gi|56180387|gb|AAV83109.1| Probable lysine 2,3-aminomutase [Idiomarina loihiensis L2TR]
          Length = 348

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 99/336 (29%), Positives = 156/336 (46%), Gaps = 4/336 (1%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q   K   T  ++L  A  +      E  +    +++ +       +   + NDP+ RQ
Sbjct: 16  WQFELKQAYTQPEELLRALKLDPALFSEDIKARKLFAMRVPKPFVAQMQVGDSNDPLLRQ 75

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E    P    DP+ +    P+ G++H+Y  R+LL L   C V CR+CFRR    
Sbjct: 76  VLPLHNEFESEPGYSTDPLQEQQG-PVNGLLHKYKSRVLLILQGGCAVNCRYCFRRHFPY 134

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            +     S +     L YI++  +I EVI +GGDPL+   +RL+ ++     +  +  LR
Sbjct: 135 DE--LTFSKRQLTETLEYIRQHPEINEVILSGGDPLMAKDERLKGLINEFELLPQLTRLR 192

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+P+V P R+  +L + L  +     + +HANH  E S E   A+    +AGI LL+
Sbjct: 193 IHSRLPVVIPSRLTHKLKEVLSNSRLQSVLVLHANHANEISPELAGALDDWHHAGIHLLN 252

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL G+ND+   L  L       R+ PYYLH  D   G SHF ++ E+ Q +   +  
Sbjct: 253 QSVLLSGVNDNLTALIELSEKLFSARVMPYYLHQLDKVEGASHFAVSDEKAQALWQKMTH 312

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335
           ++ G   P  + +  G   K  I       +     
Sbjct: 313 ELPGFLVPRLVREEAGELSKTAIMPDGTNTLTEEKL 348


>gi|298528659|ref|ZP_07016063.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298512311|gb|EFI36213.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 357

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 111/340 (32%), Positives = 182/340 (53%), Gaps = 13/340 (3%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           + + + L +   I  ++   I   +       TP  A+L++P +P  PI RQ +P  +E 
Sbjct: 12  VNTREKLADYVDITPDEDAAI--TTMRTRWGTTPYFASLMDPQDPACPIRRQVVPSLKEK 69

Query: 68  NILPEEREDPIGDNNHSP----LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
                 ++  I   N +        I  +Y DRI   +  VC  YCR CFR+E+V  Q  
Sbjct: 70  ENKYGIQDYLIHKENRAVGEKRPDCIARQYQDRIAFTVTDVCANYCRHCFRKELVVDQGL 129

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
           ++    D +  L +I+E  ++ +V+ TGGDP ILS ++L +++  LR I HVQ++RF +R
Sbjct: 130 SL--RFDVDEGLGWIREHPEVRDVLITGGDPFILSDEKLGRIITELRRIPHVQMIRFGTR 187

Query: 184 VPIVDPQRINPELIQCLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
            PIV P RIN EL + L +    PV+I    NH  E +EE    +  L   G+ + +Q+V
Sbjct: 188 TPIVLPSRINKELCEILGDFHRVPVWINTQCNHAREITEETARGVYDLMRCGVNVGNQAV 247

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL-KEKI 301
           LLKGINDDP+    L +  + +RI+PYY+ + + A G  HFR  +E+G +++    +   
Sbjct: 248 LLKGINDDPQSFRELHQKLLTVRIRPYYVFYCEPAPGIDHFRTPVEKGAELIRDAIRGHT 307

Query: 302 SGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDH 340
           +GLCQP Y+  +    GKV +   + +K+  +  Y + ++
Sbjct: 308 TGLCQPMYV--IATNIGKVPLMPDYYLKEKTDEEYVLRNY 345


>gi|332977595|gb|EGK14363.1| KamA family protein [Psychrobacter sp. 1501(2011)]
          Length = 371

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 93/327 (28%), Positives = 160/327 (48%), Gaps = 5/327 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +    +T    L     +    I     I   + + +       +   +P DP+  Q
Sbjct: 47  WQTQVADVITDIDQLLAILELSD--IKSELYIPKGFGLRVPKAFVAKMKKGDPKDPLLLQ 104

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P K E   +     DP+ +N  +P+KG++H+Y  R+L+ +   C ++CR+CFR+    
Sbjct: 105 VLPSKLEQAKISGYVTDPLAENEQNPIKGLLHKYHSRVLVTVTGACAIHCRYCFRQHF-- 162

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +G +  S+  E    YI +  +I EV+ +GGDPL LS++RL   L  L  +  +  +R
Sbjct: 163 DYQGNLPKSEQLELIQDYISQHPEIREVLLSGGDPLSLSNRRLFLWLDALEALPQISTIR 222

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P+R++ EL+  L+ +   + + +H NH  E  E     + +    GI LL+
Sbjct: 223 IHTRLPIVIPERLDSELLSRLQASRCRIVMVVHTNHANEIDEHTANYLLQARQKGITLLN 282

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL GIND   +  +L        + PYYLH  D   G +HF +T     ++   + +
Sbjct: 283 QTVLLAGINDSVSVQVDLSERLFAAGVLPYYLHLLDKVEGAAHFDMTQRRAVELYWEMLQ 342

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326
           ++ G   P  + +LP    K  +D +N
Sbjct: 343 QLPGYLVPKLVQELPNRPFKTPVDLYN 369


>gi|77919981|ref|YP_357796.1| hypothetical protein Pcar_2387 [Pelobacter carbinolicus DSM 2380]
 gi|77546064|gb|ABA89626.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
          Length = 376

 Score =  364 bits (934), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 103/342 (30%), Positives = 178/342 (52%), Gaps = 17/342 (4%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K +T+   +   N +++    ++K +   Y+        +LI+ ++P DPI R  IP  +
Sbjct: 5   KYITNIDQIPELNRLEEHHRQKLKAVQKRYAFRSNGYYQSLIDWNDPKDPIRRIVIPSAD 64

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL   P    D  G++ +S   G+ H+YPD  +L +  VC   CRFCFR+ +       V
Sbjct: 65  ELQ--PWGELDASGESLYSKAPGLEHKYPDTAVLLVSDVCGALCRFCFRKRLFMDDNQEV 122

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
              +D  A LAYI++ ++I  V+ TGGDPL+LS ++L ++++ LR I+HV+I+R  S++P
Sbjct: 123 A--RDVSAGLAYIRKHTEINNVLVTGGDPLLLSTRKLTEIIEQLRAIEHVRIIRIGSKMP 180

Query: 186 IVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
             +P RI  +PEL++  K   +P   +Y+    NHP E + EA  A+  +  +G+ ++ Q
Sbjct: 181 AFNPFRILDDPELLEMFKAHSQPNRRIYLMAQFNHPRELTSEARRALDLVLQSGVTVMHQ 240

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           + +++G+ND  E+L  L      + + PYY+       G + + + IEEG  I A   + 
Sbjct: 241 TPMIRGVNDSAEVLTELFNELSYMGVAPYYVFQCRPTEGNAAYTVPIEEGYAIFAKAHQN 300

Query: 301 ISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
            SGL +   Y   L    GK+++       + +       H 
Sbjct: 301 CSGLARRCRYT--LSHATGKIEV-----AGLTDDQVFFRYHR 335


>gi|15642896|ref|NP_227937.1| hypothetical protein TM0121 [Thermotoga maritima MSB8]
 gi|4980613|gb|AAD35215.1|AE001698_4 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 368

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 107/327 (32%), Positives = 182/327 (55%), Gaps = 15/327 (4%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           +L+ K  TS   +     +  E+ + +K +   Y         +LI+  +P+DPI +  +
Sbjct: 3   RLKVKYYTS---ITQVEQLSPEERERLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKIIV 59

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P+++EL        D   + +++  KG+ H+YPD  L  +  VC  +CRFCFR+ +  + 
Sbjct: 60  PEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINV 117

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
              V+  +D    L YI+   +I  V+ TGGDPL+LS ++L+K++ +LR I HVQI+R  
Sbjct: 118 GAEVI--RDITPQLDYIRTHKEITNVLLTGGDPLLLSTEKLEKIVSSLREIDHVQIIRIG 175

Query: 182 SRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           S++P  +P RI  +P+L++ +++     K +Y+    NHP E + EAI A++ L +AG +
Sbjct: 176 SKIPAFNPYRIIDDPDLLKMIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGAV 235

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           L +Q+ LL+GINDDPE+L  L+     + + PYY+      +G   F + IEEG +I   
Sbjct: 236 LCNQTPLLRGINDDPEVLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTK 295

Query: 297 LKEKISGLCQP-FYILDLPGGYGKVKI 322
               ISG+ +   Y+  +    GK++I
Sbjct: 296 AISNISGVAKRVRYV--MSHRTGKIEI 320


>gi|53804590|ref|YP_113783.1| hypothetical protein MCA1321 [Methylococcus capsulatus str. Bath]
 gi|53758351|gb|AAU92642.1| conserved hypothetical protein TIGR00238 [Methylococcus capsulatus
           str. Bath]
          Length = 323

 Score =  364 bits (934), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 101/295 (34%), Positives = 158/295 (53%), Gaps = 2/295 (0%)

Query: 29  KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88
            E +  +   +    A  + P +P DP+ RQ +P  +EL        DP+GD     + G
Sbjct: 31  AEAAGKFPFRVPRAYARKMRPGDPYDPLLRQVLPLAQELASPEGFVGDPVGDRPALKVPG 90

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           ++H+Y  R LL     C V+CR+CFRRE    +  +  + +  +AAL YI    ++ E+I
Sbjct: 91  LLHKYQGRALLITTGACAVHCRYCFRREFPYGE--SQFTRQREKAALDYIVRDPELTEII 148

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            +GGDPL+LS  RL ++ K L  I H++ LR HSRVP+V P RI+  L++ L        
Sbjct: 149 LSGGDPLLLSDDRLVRLTKQLTAIPHLRRLRVHSRVPLVLPSRIDERLLEILAGHRLKTV 208

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           + IHANHP E   E ++ ++ +  AG+ LL+QSVLL+ +ND    L  L     E  + P
Sbjct: 209 VVIHANHPRELDAETVSVLAAMRRAGLTLLNQSVLLRQVNDSVSALCELSERLFECGVLP 268

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           YYLH  D   GT+HF +   E + +  +L+ ++ G   P  + ++ G   K+ + 
Sbjct: 269 YYLHLLDRVRGTAHFEVPEAEARALHEALRRRLPGFLVPRLVREVEGKPYKLPVS 323


>gi|119469128|ref|ZP_01612112.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7]
 gi|119447380|gb|EAW28648.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7]
          Length = 337

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 93/317 (29%), Positives = 157/317 (49%), Gaps = 3/317 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +T  + L     +  +  +   +  + + + +       +   + NDP+  Q +P+ +E 
Sbjct: 21  VTCPKTLLEMVGLSSQVHENDLKARSLFPVRVPVPFIKKMRKGDANDPLLLQVMPRHQEF 80

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
                  +DP+ + ++    GI+H+Y  R+L+     C V CR+CFRR     +    L+
Sbjct: 81  LKKSGFNKDPLLEQDNDQ-PGILHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LN 137

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
            K    AL YI+  + I EVI +GGDPL+     +   L  L  +  ++ +R HSR+P+V
Sbjct: 138 KKSLLDALCYIKSDTNINEVILSGGDPLMAKDDAISWFLDELEKLPQIKRMRIHSRLPVV 197

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P RI  EL   L+++   +    H NH  E   E  AA+ +L +AG++LL+Q+V+LK +
Sbjct: 198 IPARITDELCARLQKSPLKIVFINHINHANEIDGEFKAAMQKLKHAGVMLLNQAVILKDV 257

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND  +   NL     +  + PYYL+  D   G SHF +  E+  KI+A L + + G   P
Sbjct: 258 NDTVDAQVNLSEALFDADVLPYYLYLLDKVEGASHFDINEEQAIKIMAELLKALPGFLVP 317

Query: 308 FYILDLPGGYGKVKIDT 324
             + ++ G   K  ID 
Sbjct: 318 KLVREIGGQKSKTPIDL 334


>gi|257063931|ref|YP_003143603.1| KamA family protein [Slackia heliotrinireducens DSM 20476]
 gi|256791584|gb|ACV22254.1| KamA family protein [Slackia heliotrinireducens DSM 20476]
          Length = 407

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 103/328 (31%), Positives = 174/328 (53%), Gaps = 11/328 (3%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  ++ +  Q L +   +       ++ I  +Y + + P   +L+NP++P+DP+ R 
Sbjct: 12  WQGILAESCSDIQQLRDFLQLSDADSTMLESIQENYPLLVNPYYLSLVNPNDPDDPVRRM 71

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            IP  EEL+       D  G++  + L G+ H+Y +  L+   + C +YCR CFRR +VG
Sbjct: 72  CIPAAEELDFSG--LADTSGESKSTVLPGLQHKYAETALVLSTNQCAMYCRHCFRRRLVG 129

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                 +  ++ +A   YI++  +I  V+ +GGD L+ S++ L + L+ L  I H++ +R
Sbjct: 130 RDADETV--RNIDAVADYIRDHEEITNVLISGGDALMNSNETLFRYLEALAPIPHLKTIR 187

Query: 180 FHSRVPIVDPQRINPE--LIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGI 235
             +R+P+V PQRI  +  LI  L        +++    NHP E + E+  AI  L   GI
Sbjct: 188 LGTRIPVVLPQRITDDPGLIDLLSGFNHIVQLHVVTQFNHPNEITPESRDAIRILLELGI 247

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIV 294
            + +Q+VLLKG+ND PE LA LM   V + I PYY+       G    F++ I  G  IV
Sbjct: 248 PVRNQTVLLKGVNDTPETLARLMDDLVGIGIVPYYVFQCRPTVGVKNRFQVPILTGCNIV 307

Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKI 322
           A  + ++SGL + F  + +    GK+++
Sbjct: 308 AQARAQLSGLAKSFRYI-MSHDAGKIEL 334


>gi|170288623|ref|YP_001738861.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2]
 gi|170176126|gb|ACB09178.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2]
          Length = 365

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 108/329 (32%), Positives = 183/329 (55%), Gaps = 19/329 (5%)

Query: 1   MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
           M++++ T +T  + L        E+ + +K I   Y         +LI+  +P+DPI + 
Sbjct: 1   MKVKYYTSITQVEQL------SPEERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKI 54

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P+++EL        D   + +++  KG+ H+YPD  L  +  VC  +CRFCFR+ +  
Sbjct: 55  VVPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFI 112

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +    V+  +D    L YI+   +I  V+ TGGDPL+LS ++L+K++ +LR I HVQI+R
Sbjct: 113 NVGAEVI--RDITPQLDYIRTHKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIR 170

Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAG 234
             S++P  +P RI  +P+L+  +++     K +Y+    NHP E + EAI A++ L +AG
Sbjct: 171 IGSKIPAFNPYRIIDDPDLLMMIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAG 230

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
            +L +Q+ LL+GINDDPE+L  L+     + + PYY+      +G   F + IEEG +I 
Sbjct: 231 AMLCNQTPLLRGINDDPEVLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIF 290

Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKI 322
                 ISG+ +   Y+  +    GK++I
Sbjct: 291 TKAISNISGVAKRVRYV--MSHRTGKIEI 317


>gi|254525082|ref|ZP_05137137.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp.
           SKA14]
 gi|219722673|gb|EED41198.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp.
           SKA14]
          Length = 313

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +     L     +    +   +     +++ +       +   +  DP+ RQ +P  EE+
Sbjct: 1   MRDPHALLARLQLDAAALGVSEAAMAQFALRVPEGFVARMRRGDAADPLLRQVLPIDEEM 60

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
              P    D +GD       G++ +Y  R LL     C + CR+CFRR           +
Sbjct: 61  RPAPGFSFDAVGDGAARKATGVIQKYRGRALLVATGSCAINCRYCFRRHF--DYGAENAA 118

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
               + A+A I     I EVI +GGDPL L+  +L ++   LR I H++ LR HSR+PIV
Sbjct: 119 KGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLVELTDALRAIPHIRRLRIHSRLPIV 178

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P+R++ EL+  L     P+ I +HANH  EF     AA++RL   G  LL+Q+VLL+G+
Sbjct: 179 LPERVDEELLAWLGSLPWPLAIVVHANHANEFDASVDAAMARLRGTGAQLLNQAVLLRGV 238

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND  + L +L      + + PYYLH  D   G +HF +     + ++A L  ++SG   P
Sbjct: 239 NDSVQALQDLSERSFAVGVLPYYLHQLDRVEGVAHFEVDDARAKALIAGLTARLSGYLIP 298

Query: 308 FYILDLPGGYGKVKI 322
             + +LPG   K  +
Sbjct: 299 KLVRELPGDPSKRPV 313


>gi|222099542|ref|YP_002534110.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359]
 gi|221571932|gb|ACM22744.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359]
          Length = 365

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 107/372 (28%), Positives = 189/372 (50%), Gaps = 36/372 (9%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           ++ +  TS   +     +  E+ +++K +   +          LIN  +P+DPI +  IP
Sbjct: 1   MKVRYYTSVTQVEQ---LSPEEKEKLKRVEERFRFRANSYYLGLINWSDPDDPIRKIIIP 57

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
           +++EL        D   + +++  KG+ H+YPD  L  +  VC  +CRFCFR+ +  +  
Sbjct: 58  EEDELEE--WGSLDASSERSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVG 115

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
             V+  +D    L YI+   +I  V+ TGGDPL+LS ++L+K++ +LR I HV I+R  S
Sbjct: 116 AEVI--RDITPQLDYIRSHKEITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVHIIRIGS 173

Query: 183 RVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           ++P  +P RI  +PEL++ +++     K +Y+    NH  E +EEAI A++ L +AG +L
Sbjct: 174 KIPAFNPYRIIDDPELLRMIRKYSTKEKKIYVMTQFNHSKELTEEAIEAVNLLKDAGAVL 233

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+ LL+GIND PE L  L+     + + PYY+      +G   F + IE+G +I    
Sbjct: 234 CNQTPLLRGINDSPETLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEKGYEIFTKA 293

Query: 298 KEKISGLCQP-FYILDLPGGYGKVKI----------------DTHN-----IKKVGNGSY 335
              +SG+ +   Y+  +    GK++I                D  N     + +    + 
Sbjct: 294 ISNLSGVAKRVRYV--MSHRTGKIEIAALTKNFIVFKYHRAHDEENRRKVMVYRRNPNAL 351

Query: 336 CITDHHNIVHDY 347
              D+  ++ +Y
Sbjct: 352 WFDDYTELIEEY 363


>gi|116753457|ref|YP_842575.1| lysine 2,3-aminomutase YodO family protein [Methanosaeta
           thermophila PT]
 gi|116664908|gb|ABK13935.1| L-lysine 2,3-aminomutase [Methanosaeta thermophila PT]
          Length = 392

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 96/321 (29%), Positives = 175/321 (54%), Gaps = 12/321 (3%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +    D+ +   +K+++  ++  ++ +++   +    +LI+ ++P DP+ +  IP   E+
Sbjct: 1   MRYVTDIMDVMQLKEDERKDLSSVTENFAFRASSYYLSLIDWNDPQDPLRKIVIPDANEM 60

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
                  +DP  + +++ L G+ H+Y    L+ + + C   CRFCFR+ +          
Sbjct: 61  --YNWGTKDPSRERSYTVLPGLQHKYRQTALMLVSNACGSLCRFCFRKRIFIDSHHETA- 117

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             D   AL YI+E  +I  V+ +GGDPL+LS +RL+++++ LR I HVQI+R  +++P+ 
Sbjct: 118 -IDLPRALDYIREHREITNVLLSGGDPLMLSTERLEEIVRRLRDIDHVQIIRIGTKLPVY 176

Query: 188 DPQRINPE--LIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           +P RI  +  L++ +K        +Y  I  NHP E S E + A+S+L  AG I +SQ+ 
Sbjct: 177 NPFRITEDPSLLEIVKRYSHENRRIYFVIQFNHPKEISSETLKAVSQLQEAGAITVSQTP 236

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           LL+G+ND+PE LA L +    + + PYY+     + G  HF++ +E    IV   K   S
Sbjct: 237 LLRGVNDNPETLAQLFKKLSFIGVSPYYVFQCRPSIGNYHFQVPVETSYAIVEKAKSMCS 296

Query: 303 GLCQP-FYILDLPGGYGKVKI 322
           GL +   ++  +    GK+++
Sbjct: 297 GLAKRAKFV--MSHATGKIEV 315


>gi|89902650|ref|YP_525121.1| hypothetical protein Rfer_3891 [Rhodoferax ferrireducens T118]
 gi|89347387|gb|ABD71590.1| L-lysine 2,3-aminomutase [Rhodoferax ferrireducens T118]
          Length = 393

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 10/328 (3%)

Query: 29  KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK-EELNILPEEREDPIGDNNHS-PL 86
           + +   ++IA+TP +A L++  +PN PI  Q++P   EE         D +G+   + P 
Sbjct: 55  ETVYKKFAIAITPYMAKLMDRDDPNCPIRLQYLPSHFEETKPGFATSLDQLGEEGDTVPG 114

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
             +VHRYP R+L  + + C   CRFC R+ MV    G+V +  + EA++ YI     I +
Sbjct: 115 TSVVHRYPRRVLFLVSNTCATLCRFCTRKRMVSQPDGSV-AKDEIEASIDYIAGNQDIED 173

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           V+ +GGDP   + +RL  +L  LR    HV+ LR  SR+ +  P R+ PEL   L++   
Sbjct: 174 VLLSGGDPFTFTDERLDYILGELRRRAPHVRFLRIGSRMVVQMPTRVTPELCAVLEKHRV 233

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
            + + IH NHP E +      +  +  AGI++  Q+V LKG+NDD  ++  L    +E+ 
Sbjct: 234 QM-VNIHINHPKEITPLLRERVKMIQKAGIMMGLQTVCLKGVNDDVAVMRELFMQTIEMG 292

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           ++PYY++  D+  G  HF +      ++   L+  ISG   P +++D  GG GK+ I   
Sbjct: 293 VRPYYVYSTDMVEGAHHFIVPHRRMLELYEGLRGWISGPAIPTFVVDGLGGLGKLPITPS 352

Query: 326 NIKKV-----GNGSYCITDHHNIVHDYP 348
            +++         +    ++  +  + P
Sbjct: 353 YVREEELPDGSGTTVKCRNYKGMTIEMP 380


>gi|50085317|ref|YP_046827.1| putative aminomutase [Acinetobacter sp. ADP1]
 gi|49531293|emb|CAG69005.1| conserved hypothetical protein; putative aminomutase [Acinetobacter
           sp. ADP1]
          Length = 338

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 96/321 (29%), Positives = 161/321 (50%), Gaps = 2/321 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL    +   + L   ++  ++ +      S+ + + +     N +   +P DP+  Q +
Sbjct: 14  QLSDLIIDPFELLDQLDISSEQLLSGAILASDTFKLRVPRAFVNKMQKADPFDPLLLQVL 73

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   EL   PE   DP+G+   + L G++H+Y  R LL L   C V+CR+CFRR     +
Sbjct: 74  PHHLELEDHPEFVTDPLGEEEANQLPGVLHKYQSRFLLTLTGACAVHCRYCFRRHFPYQE 133

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
              +  + D      YIQ+   I EVI +GGDPL L++ +L+  ++ L  +  V+ILR H
Sbjct: 134 N--LPKNNDWPQIQNYIQQHPLINEVILSGGDPLTLTNHKLKIWIERLESLPQVKILRIH 191

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SRVPIV P RI+ EL+  L+ +   + + +H+NH  E  +     + +L+   + + +Q+
Sbjct: 192 SRVPIVIPNRIDEELLSLLENSRLRIIMVVHSNHAAELDDFTCNQLHKLSLRNVTVFNQA 251

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLLKG+ND  + L  L +   + R+ PYYLH  D   G  HF L   +   +   +   +
Sbjct: 252 VLLKGVNDSAQTLIELSQRLFDARVMPYYLHVLDKVKGAQHFDLESSKVDSLYKEVLAGL 311

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
            G   P  + ++ G   K  +
Sbjct: 312 PGYLVPKLVREIAGEKNKTPL 332


>gi|150020902|ref|YP_001306256.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
           melanesiensis BI429]
 gi|149793423|gb|ABR30871.1| lysine 2,3-aminomutase YodO family protein [Thermosipho
           melanesiensis BI429]
          Length = 370

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 114/360 (31%), Positives = 188/360 (52%), Gaps = 31/360 (8%)

Query: 14  LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
           +   + + +++  E+K+++  Y         +LIN  +PNDPI +  IPQ EEL      
Sbjct: 9   IEKVDQLTEKEKQELKKVTEKYKFRANDYYLSLINWEDPNDPIRKLIIPQLEELEE--WG 66

Query: 74  REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           + D   + +++  KG+ H+Y D  LL +  VC  +CRFCFR+ +  +    V   +D   
Sbjct: 67  KLDASNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINIGEEVA--RDVTE 124

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI- 192
            L YI++  +I  V+ TGGDPL+LS K+L+K++  +R I+HVQI+R  S++   +P RI 
Sbjct: 125 DLEYIKKHKEITNVLLTGGDPLLLSTKKLEKIISQIREIEHVQIIRIGSKMVAFNPYRII 184

Query: 193 -NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
            +PELI+ +K+     K +YI    NHP E +E+AI A++ L  AG IL +Q+ L+KG+N
Sbjct: 185 EDPELIELIKKYSTNEKKIYIMTQFNHPRELTEQAIIAVNMLQKAGAILANQTPLIKGVN 244

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           DD + L  L +    + + PYY+      AG   F + +EEG +I       +SGL +  
Sbjct: 245 DDWKTLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEGYQIFLKAIMNVSGLAKRA 304

Query: 309 YILDLPGGYGKVKID-------------THN--------IKKVGNGSYCITDHHNIVHDY 347
               +    GK+++               HN        + K    +Y   D++ +V +Y
Sbjct: 305 RFA-MSHETGKIEVSALTKEHIIFRYQRAHNPKNAGKIMVFKRNPNAYWFDDYNELVEEY 363


>gi|253576596|ref|ZP_04853924.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844010|gb|EES72030.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 389

 Score =  361 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 101/340 (29%), Positives = 175/340 (51%), Gaps = 15/340 (4%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
           D+   + + +++  E+K I++ +   +     NLI+ ++P DPI +  IP   EL     
Sbjct: 9   DIAKVSQLSEQERQELKPITDKFVFRVNDYYLNLIDWNDPEDPIRKLVIPNTGELKE--Y 66

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
            R D   +  +  + G  H+Y    LL +  VC  YCR+CFR+ +   +     +  D  
Sbjct: 67  GRWDASDEAANYVVPGCQHKYRTTALLIVSEVCGSYCRYCFRKRLF--RNDVKEAMADVT 124

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
             + YI +  +I  ++ TGGD LIL+ K+L+ +L+ LR I+HV+I+R  S++P+ +P RI
Sbjct: 125 PGIEYIAQHPEINNILLTGGDSLILATKKLRSILERLRAIEHVKIIRLGSKIPVFNPMRI 184

Query: 193 --NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
             +PEL+  ++E     + +Y+  H NHP E + EA      L +AG I+++Q+ +LKGI
Sbjct: 185 YEDPELLDLIREFSTVDQRIYVMAHINHPREITPEAKRGFQALHDAGAIVVNQTPILKGI 244

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           NDD  +L  L+       + PYY       AG + F + ++   ++V   K + SGL + 
Sbjct: 245 NDDAAVLGELLDRLSWAGVTPYYFFINRPVAGNADFVIPLKRAYQLVEEAKARTSGLGKR 304

Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
              L +    GK++I       + NG   +  H +   +Y
Sbjct: 305 VR-LSMSHSSGKIEI-----LAIENGQAYLKYHQSRDGEY 338


>gi|301166960|emb|CBW26539.1| putative L-lysine 2,3-aminomutase [Bacteriovorax marinus SJ]
          Length = 447

 Score =  361 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 96/371 (25%), Positives = 188/371 (50%), Gaps = 25/371 (6%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55
            QL++ ++   + +       I KE +D+IK       +   +TP I  LI+  +P + P
Sbjct: 42  WQLKN-SIRKVEQVEKVLGSKISKEHMDDIKAGQKITPMNIRITPYIFALIDWRDPLSCP 100

Query: 56  IARQFIPQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           + +QF+P   + L   P  + D +G++  SP+  + HRYPD++L     +CPVYC +C R
Sbjct: 101 LRKQFLPMGSQFLEDHPYYQSDSLGEDVDSPVPMLTHRYPDKVLFLPTTICPVYCSYCTR 160

Query: 115 REMVGSQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
             ++G    ++       + K  +    Y+    ++ +V+ +GGD  +L+ K+++ + + 
Sbjct: 161 SRIIGGSTESIEKETYGANQKKWDDVFEYLSNHPKVEDVVVSGGDAFMLTPKQIRYIGEN 220

Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEF 219
           L  I H++ +R  ++   + PQ++  + +  + +       +  GK V I  H +   E 
Sbjct: 221 LLRIPHIRRIRLATKGVAIFPQKVLTDDDWFEAVQDIHKLGRSFGKQVVIHTHFSCAKEI 280

Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
           ++ +  A+ RL  AGI++ +Q+VL +G+N+  + +  L R    L I+PYY++  D+  G
Sbjct: 281 TKWSQMAMDRLFQAGIVVRNQAVLQEGVNNHVDEMVLLTRQVGYLNIQPYYVYMHDMVPG 340

Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
             HFR T++E +++  +++   +G   P ++ DLPGG GK  + ++      NG      
Sbjct: 341 CEHFRTTLKEAEELEKAVRGTTAGFNTPTFVCDLPGGGGKRHVASYEYYDEENGISVWKA 400

Query: 340 HH---NIVHDY 347
            H     +  Y
Sbjct: 401 PHVKPGELFTY 411


>gi|149179351|ref|ZP_01857910.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797]
 gi|148841823|gb|EDL56227.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797]
          Length = 335

 Score =  361 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 106/326 (32%), Positives = 174/326 (53%), Gaps = 6/326 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q    + +   Q+L +   + ++ ++  +  ++ + + +     N I P + +DP+ +Q
Sbjct: 10  WQKSLAQAIRDPQELISRLNLPQDLLEPARRSAHLFPLMVPVSYLNRIEPGSLDDPLLKQ 69

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P + E   +P    D +GD N     GI+ +Y  R LL +   C ++CR+CFRR    
Sbjct: 70  ILPVELENADIPGFETDAVGDLNVRATPGILQKYHGRALLMVSGACAIHCRYCFRRHYPY 129

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +   L+  D E     +Q  S + E+I +GGDPL+L+  RL  + + +  I HV+ LR
Sbjct: 130 GDEPRTLA--DWEPVWQSLQADSTVQEIILSGGDPLLLTDLRLNDLCERIAAIPHVKRLR 187

Query: 180 FHSRVPIVDPQRINPELIQCL---KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
            HSR+P+V P RI+  L++ L    E G   ++ IH NHP E + +   AI ++  AGI 
Sbjct: 188 IHSRLPVVLPDRIHAGLLEMLHGLTEQGTMPWMVIHINHPNEIAPDVELAIKQMLQAGIP 247

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           +L+QSVLLKGIND  E L  L    V L + PYYLH  D   G +HF +   +G+K++  
Sbjct: 248 VLNQSVLLKGINDTAETLIELSEKLVNLGVIPYYLHQLDRVTGAAHFEVPQAQGRKLIEE 307

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
           L+ ++ G   P Y+ ++PG   K  +
Sbjct: 308 LRTRLPGYAVPQYVREIPGEPHKTSL 333


>gi|281412181|ref|YP_003346260.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila
           RKU-10]
 gi|281373284|gb|ADA66846.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila
           RKU-10]
          Length = 365

 Score =  361 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 107/329 (32%), Positives = 182/329 (55%), Gaps = 19/329 (5%)

Query: 1   MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
           M++++ T +T  + L        E+   +K +   Y         +LI+  +P+DPI + 
Sbjct: 1   MKVKYYTSITQVEQL------SPEERGRLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKI 54

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P+++EL        D   + +++  KG+ H+YPD  L  +  VC  +CRFCFR+ +  
Sbjct: 55  IVPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFI 112

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +    V+  +D    L YI+   +I  V+ TGGDPL+LS ++L+K++ +LR I HVQI+R
Sbjct: 113 NVGAEVI--RDITPQLDYIRSHKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIR 170

Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAG 234
             S++P  +P RI  +P+L+  +++     K +Y+    NHP E + EAI A++ L +AG
Sbjct: 171 IGSKIPAFNPYRIIDDPDLLMMIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAG 230

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
            +L +Q+ LL+GINDDPE+L  L+     + + PYY+      +G   F + IEEG +I 
Sbjct: 231 AMLCNQTPLLRGINDDPEVLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIF 290

Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKI 322
                 ISG+ +   Y+  +    GK++I
Sbjct: 291 TKAISNISGVAKRVRYV--MSHRTGKIEI 317


>gi|71066234|ref|YP_264961.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4]
 gi|71039219|gb|AAZ19527.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4]
          Length = 335

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 100/327 (30%), Positives = 169/327 (51%), Gaps = 5/327 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  + +TS  +L     ++  + +    +  H+ + +       +   + +DP+ RQ
Sbjct: 11  WQTQLSEAITSIDELLEILQLQSLRSEVY--VPEHFELRVPRAFVAKMTVGDRDDPLLRQ 68

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P ++E   +     DP+ +N H+P+KG++H+Y  R+LL L   C ++CR+CFR+    
Sbjct: 69  VLPHQKERITVAGYVADPLAENAHNPVKGVLHKYQSRLLLTLTGACAIHCRYCFRQHFDY 128

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           S      S+K  +  + YI    +I E+I +GGDPL ++++RL   L TL  I+ +  +R
Sbjct: 129 SANMPTASAK--QDIIDYISAHPEINEIILSGGDPLNVTNRRLFAWLDTLEAIEQLTTIR 186

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P R++  L++ L ++   + + IH NH  E        + R   AGI LL+
Sbjct: 187 IHTRLPLVIPARLDDALLERLAQSCCQIVMVIHGNHANEIDTLTAEYLRRARAAGITLLN 246

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLKGIND       L +      + PYYLH  D  AG +HF        ++  SL  
Sbjct: 247 QAVLLKGINDSVSAQMALSQRLFAAGVLPYYLHVLDKVAGAAHFDRDERSAIELYWSLLA 306

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326
           K+ G   P  + +LP    KV I+ +N
Sbjct: 307 KLPGYLVPKLVRELPNKPFKVPINVYN 333


>gi|254447007|ref|ZP_05060474.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
           HTCC5015]
 gi|198263146|gb|EDY87424.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
           HTCC5015]
          Length = 343

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 108/318 (33%), Positives = 158/318 (49%), Gaps = 4/318 (1%)

Query: 7   TLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
            +TS  +L     +       ++ +     +S+ +     + +     +DP+  Q +PQ 
Sbjct: 28  AVTSPAELLRLVGLDQHPRWKEQAERAQPPFSLKVPRSYIHRMQFGCADDPLLLQALPQA 87

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            E   +     DP+GD N     G++H+Y  R+LL     C ++CR+CFRRE    Q   
Sbjct: 88  VEHAEVAGFSADPVGDLNAQKTTGLLHKYHGRVLLVATGACAIHCRYCFRREYPYEQASA 147

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
             S    + +L YI   S I EVI +GGDPL LS KRL K++  +  I HVQ LR HSR+
Sbjct: 148 TQS--QWQESLDYIAADSSIHEVILSGGDPLTLSDKRLHKLIDRIETISHVQRLRIHSRL 205

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           PIV P R+   L Q L ++     + +HANH  E       A+  L  AG+  L+Q+VLL
Sbjct: 206 PIVLPSRVTETLCQRLAQSRLRCIMVVHANHAQELDHTTAKALQDLRRAGVDCLNQAVLL 265

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
            GIND  E LA L     E    PYYLH  D   G +HF +     + +VA L+E++SG 
Sbjct: 266 AGINDSVEALAQLSERLFEQGALPYYLHSLDRVHGAAHFEVDEARAKHLVAQLRERLSGY 325

Query: 305 CQPFYILDLPGGYGKVKI 322
             P  + ++ G   K  +
Sbjct: 326 LVPTLVREIEGESSKTPL 343


>gi|87118912|ref|ZP_01074811.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121]
 gi|86166546|gb|EAQ67812.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121]
          Length = 351

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 100/318 (31%), Positives = 161/318 (50%), Gaps = 3/318 (0%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           ++H  +     L     +    +   K     + + +       I   N NDP+ RQ +P
Sbjct: 27  IKH-AIKDLDTLAKKLNLNLTSVLTGKHAHKAFQLMVPMPYLERIEKGNLNDPLLRQILP 85

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
             EE+  +     DP+ + +H+P K +VH+Y  RIL+     C + CR+CFRR    +  
Sbjct: 86  IDEEMKQVKGYVTDPLAELDHNPKKALVHKYSSRILVITSGSCAINCRYCFRRHFPYANN 145

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
              L+  + ++ L+YIQ   QI EVI +GGDPL++  K+L +++  L  +  ++ LR H+
Sbjct: 146 --HLAPAEWDSLLSYIQTHPQINEVILSGGDPLMMKDKQLSQLISRLEALPQLKRLRIHT 203

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+PIV P RIN EL+    +    V + +H NH  E   + I A S+LA  G+ LL+Q V
Sbjct: 204 RLPIVIPSRINNELLNWASQTRLKVIMVLHINHANEIDGKVIEACSKLAKIGVRLLNQGV 263

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           +LK +ND  E    L     +  I PYY+   D   G SHF +TI++ Q+++  +   + 
Sbjct: 264 ILKNVNDTAEAQIALSEALFDADILPYYMFTLDPVEGASHFDITIDQAQQLMGQVAANLP 323

Query: 303 GLCQPFYILDLPGGYGKV 320
           G   P    ++PG   K 
Sbjct: 324 GYLVPKLAKEIPGKTAKT 341


>gi|262368517|ref|ZP_06061846.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046]
 gi|262316195|gb|EEY97233.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046]
          Length = 338

 Score =  359 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 4/324 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q +    +T   +L N   I  EQ+       S  + + +       +   NP DP+  
Sbjct: 11  WQAQLSDLITDPLELLNILEISPEQLLSGALLASTQFKLRVPRAFVTRMQKGNPLDPLLL 70

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +P   EL   P+   DP+G+   +   G++H+Y  R LL L   C V+CR+CFRR   
Sbjct: 71  QVLPHHLELEEHPDFVTDPLGEEQANQQPGVLHKYKTRFLLTLTGACAVHCRYCFRRHFP 130

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +   +  S+D      YIQ +  I EVI +GGDPL LS+++++  ++ L  I  ++ L
Sbjct: 131 YQEN--LPKSEDWINIQHYIQSQPDINEVILSGGDPLTLSNRKIKLWIERLESIPQLKFL 188

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R HSRVPIV P R++ ELI  LK +   + + +H+NH  E  +     + +     I + 
Sbjct: 189 RIHSRVPIVMPNRVDDELISILKNSRLRIILVVHSNHASELDDFTCRQLQQFVAEKITVF 248

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKG+ND  +IL +L     +  + PYYLH  D   G  HF L  ++   +   L 
Sbjct: 249 NQAVLLKGVNDHVQILTDLSYRLFDAGVLPYYLHVLDKVKGAHHFDLNPQDIDFLYQGLL 308

Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
             + G   P  + ++ G   K  +
Sbjct: 309 ANLPGYLVPKLVREIAGEKNKTPL 332


>gi|303328383|ref|ZP_07358821.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3]
 gi|302861713|gb|EFL84649.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3]
          Length = 378

 Score =  359 bits (922), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 103/345 (29%), Positives = 182/345 (52%), Gaps = 16/345 (4%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           + ++ +T+A+ L      ++E +++++ IS  +  ++ P   +LI+P +P+DPI +  +P
Sbjct: 1   MLNENMTTAEQLQKHIFFREEHLEQLQRISKRFPFSIPPYYLSLIDPSDPHDPIRKMCVP 60

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
             +EL+  P  R D  G+ +++ L G+ H+Y    L+   + C +YCR CFR+ +VG + 
Sbjct: 61  ALDELD--PGGRLDTSGEASNTVLTGLQHKYRQTALVLSTNACAMYCRHCFRKRLVGLEG 118

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
                 +D    LAYI++  +I  V+ +GGD L+     L + L+ L  ++H+ ++R  S
Sbjct: 119 RETRPRRD--KVLAYIRKHHEISNVLLSGGDALLNPTPVLHEYLEELSGMEHLDVVRICS 176

Query: 183 RVPIVDPQRINPE--LIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R P+V P RI  +  L+   KE G  K + +    NHP E S +A  A+  L   G+++ 
Sbjct: 177 RTPVVLPMRIYMDQKLLDLFKEYGAQKHLCLVTQFNHPRELSPQAQRALDALQECGVMVR 236

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIVASL 297
           +Q+VLL G+ND    L  L++  V   + PYY+       G   +F++ I +   IV   
Sbjct: 237 NQTVLLHGVNDHGPTLGKLLKELVRRGVVPYYVFQCRPVTGVKNNFQVPIAQAYAIVEEA 296

Query: 298 KEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
           K+  +GL +   Y+  L    GK++I    +  VGNG +    H 
Sbjct: 297 KQMQNGLGKAFRYV--LSHETGKIEI----LGPVGNGRWLFKYHQ 335


>gi|239618040|ref|YP_002941362.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
           19.5.1]
 gi|239506871|gb|ACR80358.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF
           19.5.1]
          Length = 366

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 104/322 (32%), Positives = 168/322 (52%), Gaps = 13/322 (4%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K LT    +     + K + +++K+++  +         NLI   +PNDPI R  IP  +
Sbjct: 5   KYLTRIDQISQ---LDKTEKEKLKKVTEKFVFRTNEYYLNLIKWDDPNDPIKRIIIPSMD 61

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL        D   ++ ++   G+ H+Y D  L+ +  VC   CRFCFR+ +  +    +
Sbjct: 62  ELIE--WGELDASNEHKYTVAPGLEHKYKDTALMLVSRVCGGICRFCFRKRVFLAGNREI 119

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           +   D E  L YI++  +I  V+ +GGDPL+LS  +L+ ++  LR I HVQI+R  +++ 
Sbjct: 120 M--IDVEPGLEYIKKHKEITNVLLSGGDPLMLSTSKLENIISRLRKIDHVQIIRIGTKMV 177

Query: 186 IVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
             +P RI  +P+LI+ LK+     K +YI    NHP E ++ AI AI+ L  AG  L +Q
Sbjct: 178 AFNPYRIIDDPKLIELLKKYSTPKKRIYIMTQFNHPREITDVAIEAINLLKEAGTELANQ 237

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           + L++GIND PE LA L R    + + PYY+       G   + + IEEG +I       
Sbjct: 238 TPLIRGINDSPETLAELFRKLSFIGVPPYYVFQCRPTKGNKAYSVPIEEGYEIFRKATAM 297

Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
           +SGL +      +    GK+++
Sbjct: 298 VSGLAKRARFA-MSHMTGKIEV 318


>gi|116207106|ref|XP_001229362.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51]
 gi|88183443|gb|EAQ90911.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51]
          Length = 498

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 115/343 (33%), Positives = 174/343 (50%), Gaps = 26/343 (7%)

Query: 31  ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNI-LPEEREDPIGDNNHSPLKG 88
            +   ++ +TP I + IN HNP +DPIARQF+P K  +    P+   D + +   SP+KG
Sbjct: 143 TAATMAVRMTPYILSRINWHNPRHDPIARQFLPLKSRMIPDHPKLTLDSLHEEADSPVKG 202

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKS 142
           +VHRYPD+ L     VCP YC FC R   VG+   TV         +  + ALAYI  + 
Sbjct: 203 LVHRYPDKALFLPTSVCPTYCTFCTRSYAVGADTATVSKASLKPGRRRWDEALAYIASQP 262

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NP 194
           Q+ +++ +GGD   L  ++L+++ + L  I H++  RF S+   V P R+          
Sbjct: 263 QLQDIVVSGGDAYYLQAEQLEQLGERLIAIPHIRRFRFASKGLAVAPGRVLDRSGDGWTD 322

Query: 195 ELIQ---CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
            L++     + AGK V    H NHP E S    AA  RL   G+++ +QSVLL+G+NDD 
Sbjct: 323 ALVRVSDRARRAGKAVAWHTHFNHPSEISWVTEAAAQRLFEEGVMVRNQSVLLRGVNDDV 382

Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
           E +  L+R      I PYY++  D+     H R  +     + A L+  I+G   P +++
Sbjct: 383 ETMGALIRGLANNNIFPYYVYQCDMVKSVEHLRTPLRTILDLEAKLRGSIAGFMMPSFVV 442

Query: 312 DLPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347
           DLPGG GK    ++    +  G   Y        D  N V++Y
Sbjct: 443 DLPGGGGKRLACSYESYDRATGISRYTAPAVTGRDKENKVYEY 485


>gi|332534315|ref|ZP_08410158.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332036225|gb|EGI72698.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 329

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 91/317 (28%), Positives = 155/317 (48%), Gaps = 3/317 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +T  + L     +  +  +   +  + + + +       I   +PNDP+  Q +P+ +E 
Sbjct: 13  VTCPKTLLEMVGLSSQVHENDLKARSLFPVRVPIPFIKKIRKGDPNDPLLLQVMPRHQEF 72

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
                  +DP+ + ++    G++H+Y  R+L+     C V CR+CFRR     +    L+
Sbjct: 73  LTKSGFNKDPLLEQDNDQ-PGLLHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LN 129

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
            K     L+YI+  S I EVI +GGDPL+     +   L  L  +  ++ +R HSR+P+V
Sbjct: 130 KKSLLETLSYIKSDSNINEVILSGGDPLMAKDDAISWFLDELEQLPQIKRMRIHSRLPVV 189

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P R+  EL + L ++   +    H NH  E   +  AA+ +L  A + LL+Q+V+LK +
Sbjct: 190 IPTRVTDELCERLAKSPLKIIFINHINHANEIDADFKAAMQKLKQANVTLLNQAVILKDV 249

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND  +   NL     +  + PYYL+  D   G SHF +  E+  KI+A L + + G   P
Sbjct: 250 NDTLDAQINLSEALFDADVLPYYLYLLDKVEGASHFDINEEDAIKIMAELLKALPGFLVP 309

Query: 308 FYILDLPGGYGKVKIDT 324
             + ++ G   K  ID 
Sbjct: 310 KLVREIGGQKSKTPIDL 326


>gi|88798858|ref|ZP_01114440.1| radical SAM domain protein [Reinekea sp. MED297]
 gi|88778338|gb|EAR09531.1| radical SAM domain protein [Reinekea sp. MED297]
          Length = 346

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 99/325 (30%), Positives = 168/325 (51%), Gaps = 3/325 (0%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q    K   +  +L +   +K  ++    + ++ + + +T  +A+L+   NP DP+  Q
Sbjct: 24  WQKSIAKGFRTPSELLDYLNLKTSELPYQIDPNSPFRMRITRHLASLMEKGNPFDPLLLQ 83

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            IP+ +E    P  + DP+ + ++  + G++H+Y +R+L+     C ++CR+CFRR    
Sbjct: 84  LIPRLDETTEQPGYQTDPLMEEDYQVIPGLIHKYQNRVLIIAHQACAIHCRYCFRRHFPY 143

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           S+    LS    +A   YIQ  S I EVIF+GGDPL L+ + L  +++    +  +Q +R
Sbjct: 144 SE--ARLSESSLDAIEQYIQSHSDIDEVIFSGGDPLSLADEALSNLIQRFDRLPQIQTVR 201

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R P+  P+RI   L+  L      V + +H NHP E   + +A   RL +  + LL+
Sbjct: 202 LHTRTPVAAPERITETLLNTLNNLSCQVVMVVHINHPNELHPDLLAKFLRLRDINVTLLN 261

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL+GIND  +    L +      + PYYLH  D   GTSHF +  +   +I   ++ 
Sbjct: 262 QSVLLRGINDCSKTQIRLCKQLFAHGVLPYYLHSLDPVQGTSHFDVNQQTAGQIWLEMQA 321

Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
            +SG   P  + ++P  + K  I  
Sbjct: 322 GLSGYLLPRLVREIPQRHSKTWIHP 346


>gi|294664930|ref|ZP_06730245.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292605300|gb|EFF48636.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 342

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 96/323 (29%), Positives = 155/323 (47%), Gaps = 3/323 (0%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q + +  +   + L     +  +        +  + + +       +   + +DP+ RQ
Sbjct: 22  WQQQWRDAVRDPRVLLQLLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E+   P    D +GD       G++ +Y  R LL     C V+CR+CFRR    
Sbjct: 82  VLPLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +++    +      A+A I     I EV+ +GGDPL L+  +L ++   L  + H++ LR
Sbjct: 142 AEE--TATRDGWRDAVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAVPHLKRLR 199

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+PIV P+R++  L+  L+    PV   +HANH  EF     AA   L  AG  LL+
Sbjct: 200 IHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLREAGAQLLN 259

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF +     + + A L  
Sbjct: 260 QAVLLRGVNDSVDALAALSERSFVAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++SG   P  + ++PG  GK  +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342


>gi|319789677|ref|YP_004151310.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
           ammonificans HB-1]
 gi|317114179|gb|ADU96669.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
           ammonificans HB-1]
          Length = 372

 Score =  358 bits (920), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 102/323 (31%), Positives = 170/323 (52%), Gaps = 13/323 (4%)

Query: 8   LTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
             S +++  A    I   + ++++E+   + + +    A LI+  +PNDPI     P  +
Sbjct: 6   FKSLEEVEQAFGVKIPDSEREKLQEVIEKHPMFIPDYYARLIDWSDPNDPIKNIIFPSLD 65

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL++      D  G+  ++ L G+ H+Y +  LL + + C  YCR CFR+ +VG      
Sbjct: 66  ELDVSGSY--DTSGEKENTVLTGLQHKYKETALLLVTNRCAGYCRHCFRKRLVGIPTNET 123

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           L  K  + A+ YI+E  +I  V+ +GGDPL+L    ++  L  L  I H++ +RF SRVP
Sbjct: 124 L--KLFDRAVEYIKEHPEITNVLISGGDPLVLPTDVIEYFLSELSKIPHLKFIRFGSRVP 181

Query: 186 IVDPQRINPE--LIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           +  P RI  +  L++   +   P   VY+  H NHP E ++EA  A+  L  AG+ + +Q
Sbjct: 182 VFYPMRIYEDTKLLEVFSKYSTPERRVYLVTHFNHPNEVTKEARKAVDSLIRAGVPVSNQ 241

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQKIVASLKE 299
           +VLLKG+ND PE+LA LM+      + PYY+          +HF++ ++EG  IV   K 
Sbjct: 242 TVLLKGVNDTPEVLATLMKEITSAGVIPYYVFQCRPVSRVKTHFQVPLKEGYWIVEGAKR 301

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
            + G  +  +   +    GK++I
Sbjct: 302 MLDGHAK-RFKYIMSHKTGKIEI 323


>gi|71276242|ref|ZP_00652521.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon]
 gi|71900995|ref|ZP_00683107.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
 gi|170730740|ref|YP_001776173.1| hypothetical protein Xfasm12_1634 [Xylella fastidiosa M12]
 gi|71163003|gb|EAO12726.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon]
 gi|71729246|gb|EAO31365.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
 gi|167965533|gb|ACA12543.1| conserved hypothetical protein [Xylella fastidiosa M12]
          Length = 357

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 2/321 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q+  + +   ++L     +    +   +  +  + + +       +   + +DP+ RQ +
Sbjct: 39  QVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVARMRVGDLHDPLLRQVL 98

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E + +     D +GD       GI+ +Y  RILL     C V+CR+CFRR    ++
Sbjct: 99  PMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 158

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                S      A A+++    I EVI +GGDPL LS  +L ++   LR I H++ LR H
Sbjct: 159 D--TASHDRWREAAAFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRSIAHLKRLRIH 216

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P+RI+  L++ L     PV   IHANH  EF     AA++ L   G  LL+Q+
Sbjct: 217 SRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 276

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+ND+   LA L        + PYYLH  D  AGT+H+ +     + + A L  ++
Sbjct: 277 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVARL 336

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
           SG   P ++ ++PG   K  +
Sbjct: 337 SGYLVPRFVREVPGDSSKRPL 357


>gi|225403174|ref|ZP_03760471.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme
           DSM 15981]
 gi|225043179|gb|EEG53425.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme
           DSM 15981]
          Length = 364

 Score =  358 bits (919), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 102/341 (29%), Positives = 179/341 (52%), Gaps = 18/341 (5%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +T A++L     +  E+   ++ I  H+ + +T    +LIN  +P DPI R  IP  EE 
Sbjct: 11  ITKAEELRGYLKLSDEETSRLEAILEHFPMTITRYYLSLINWDDPKDPIRRMCIPSIEEN 70

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           ++  +   D  G+ +++ L G+ H+Y + +L+   H C +YCR CFR+ +VG        
Sbjct: 71  DMTGKF--DTSGEADNTILPGLQHKYNETVLILSTHRCAMYCRHCFRKRLVGISDDETA- 127

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             +      YI++ ++I   + +GGD  + S+  +++ L+    I+H+ ++RF +R P+V
Sbjct: 128 -DNVAEMADYIRQHAEISNALISGGDAFLNSNAVIRRYLELFSDIEHLDLIRFGTRTPVV 186

Query: 188 DPQRI--NPELIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
            P RI  +PEL++ L+     K +Y+    NHP E + EA  A+  L NAG++L +Q+VL
Sbjct: 187 LPARIYDDPELLETLQTYSQRKKIYVVTQFNHPAELTGEAKKAVDALLNAGVVLKNQTVL 246

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLK--EK 300
           LKG+NDD   +  L++      I PYY+      +G   HF++ + EG +IV   K  + 
Sbjct: 247 LKGVNDDGRTMGELLKGLTRWGIAPYYIFQCRPVSGVGGHFQVPLTEGYRIVEEAKQFQN 306

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
             G C   Y+  +    GK++I    + ++ +G      H 
Sbjct: 307 GPGKCV-RYV--MSHVTGKIEI----LGQLPDGQMLFKYHQ 340


>gi|294624428|ref|ZP_06703117.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292601277|gb|EFF45325.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 342

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 154/323 (47%), Gaps = 3/323 (0%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q + +  +   + L     +  +        +  + + +       +   + +DP+ RQ
Sbjct: 22  WQQQWRDAVRDPRVLLQLLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E+   P    D +GD       G++ +Y  R LL     C V+CR+CFRR    
Sbjct: 82  VLPLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +++    +      A+  I     I EV+ +GGDPL L+  +L ++   L  + H++ LR
Sbjct: 142 AEE--TAARDGWRDAVVAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAVPHLKRLR 199

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+PIV P+R++  L+  L+    PV   +HANH  EF     AA   L  AG  LL+
Sbjct: 200 IHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLREAGAQLLN 259

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF +     + + A L  
Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++SG   P  + ++PG  GK  +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342


>gi|297583799|ref|YP_003699579.1| lysine 2,3-aminomutase YodO family protein [Bacillus
           selenitireducens MLS10]
 gi|297142256|gb|ADH99013.1| lysine 2,3-aminomutase YodO family protein [Bacillus
           selenitireducens MLS10]
          Length = 386

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 106/352 (30%), Positives = 178/352 (50%), Gaps = 23/352 (6%)

Query: 14  LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
           +     +  E+  ++K+I+  +   +      LI+  +P DPI +  IP + EL      
Sbjct: 10  IEKVPHLSDEEKAKLKQITEKFVFRVNEYYLGLIDWGDPKDPIRKLVIPNEGELEE--YG 67

Query: 74  REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           R D   ++ +  + G  H+Y +  LL +  VC  YCR+CFR+ +  +     +S  D + 
Sbjct: 68  RWDASDEDTNYVVPGCQHKYDETALLIVSEVCGAYCRYCFRKRLFRNDIKEAMS--DVQP 125

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI- 192
            + YI+E  +I  V+ TGGD LIL+ K+L+ +++ LR I HV+I+R  S++P+ +P RI 
Sbjct: 126 GIDYIKEHPEISNVLLTGGDSLILATKKLRFIIEQLREIPHVKIIRLGSKMPVFNPMRIY 185

Query: 193 -NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
            + EL+  + E     + +Y+  H NHP E + EA      L NAG I+++Q+ +L+GIN
Sbjct: 186 EDQELLDLISEYSTTEQRIYVMAHINHPNEITPEAKKGFDALHNAGAIVVNQTPVLRGIN 245

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           DDP +L  L+       + PYY       AG + F L+++E   IV   K + SGL +  
Sbjct: 246 DDPVVLGELLDQLSWAGVTPYYFFINRPVAGNNEFVLSLKEAYDIVEEAKARTSGLGKRV 305

Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI--------VHDYPPKSS 352
             L +    GK++I       + +G   +  H +         V D P  +S
Sbjct: 306 R-LSMSHTSGKIEI-----LAIDDGKAYLKYHQSRDGHYGKFMVLDCPEDAS 351


>gi|255318144|ref|ZP_05359387.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter
           radioresistens SK82]
 gi|262378563|ref|ZP_06071720.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164]
 gi|255304796|gb|EET83970.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter
           radioresistens SK82]
 gi|262299848|gb|EEY87760.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164]
          Length = 338

 Score =  357 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 103/324 (31%), Positives = 163/324 (50%), Gaps = 4/324 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q +    +T   +L +A  +  EQ+       S  + + +       +   +P DP+  
Sbjct: 11  WQSQLSDLITDPLELLHALQLSPEQLLSGAVLASEKFKLRVPRAFVAKMCIGDPLDPLLL 70

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +P   EL   P    DP+G+   + L G++H+Y  R LL L   C V+CR+CFRR   
Sbjct: 71  QVLPHHLELEDFPGFVTDPLGEEAANLLPGVLHKYKTRFLLTLTGACAVHCRYCFRRHFP 130

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +   +  ++D  A   YI  + ++ E+I +GGDPL LS+++L   L+ L  I  +  L
Sbjct: 131 YQEN--LPKNEDWPAIKNYILSQPEVHEIILSGGDPLTLSNRKLGLWLERLESIPQIDTL 188

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R HSRVPIV P RI+ ELI  L+ +   + + +H+NH  E  +   + +  LA   + +L
Sbjct: 189 RIHSRVPIVIPDRIDHELISLLENSRLRIILVVHSNHASELDDFTCSKLHELARRQVTVL 248

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKGIND  E+L NL     E R+ PYYLH  D   G  HF L   +  ++   + 
Sbjct: 249 NQAVLLKGINDSAEVLINLSYRLFEARVMPYYLHVLDKVKGAHHFDLPSSKIDEVYKEVL 308

Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
             + G   P  + ++ G   K  +
Sbjct: 309 ASLPGYLVPKLVREIAGEKNKTPL 332


>gi|157374957|ref|YP_001473557.1| lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3]
 gi|157317331|gb|ABV36429.1| Lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3]
          Length = 397

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 104/343 (30%), Positives = 186/343 (54%), Gaps = 12/343 (3%)

Query: 7   TLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           +  + ++L      I   + D    +    +  +TP IA L++  +   PI  Q++P++ 
Sbjct: 51  SFKTDKELSKVFGNINPVEED----VYKVIATRITPYIAQLMDKDDQACPIRIQYVPEQN 106

Query: 66  ELNILPEEREDPIGDNNHSP-LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           E+++ P+E  D + +++  P    IVHRYP+R+L  + ++C  YCR C R+ MV S    
Sbjct: 107 EMDVAPQEMGDQLAEDDMMPDGTSIVHRYPNRVLFLVHNICGAYCRHCTRKRMV-SDPLN 165

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSR 183
           V+S +    ++ Y++E  ++ +V+ +GGDPL+L+  +L +VL  +R     ++ILR  SR
Sbjct: 166 VISMERIRKSVEYLREHPEVQDVLLSGGDPLLLTDDKLDQVLSMIREARPDLKILRIGSR 225

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           +P   P RI PEL Q L +    + +    NHP E +   +  ++ L  +GI+L +QSVL
Sbjct: 226 LPTQLPTRITPELCQILVKNRVTL-LNTQVNHPKEITPLFVKHMAMLRTSGIMLGNQSVL 284

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           +KG+ND  E++ +L+   V   I+PYY++  D A G S F+++ +   +I   ++  +SG
Sbjct: 285 IKGVNDSVEVMRDLVMDLVSNGIRPYYVYSMDPAPGNSKFQVSYDRMLEIYHGIRGWVSG 344

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKV---GNGSYCITDHHNI 343
              P +I+D  GG GK+ +    ++K    G      T+    
Sbjct: 345 PAIPTFIVDGIGGLGKMPVQPEYVRKQVIDGETKLLATNFEGR 387


>gi|77359438|ref|YP_339013.1| lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis TAC125]
 gi|76874349|emb|CAI85570.1| putative lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 308

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 87/295 (29%), Positives = 148/295 (50%), Gaps = 3/295 (1%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           +  + + + +       +   + NDP+  Q +P+ +E        +DP+ + ++    G+
Sbjct: 14  KARSLFPVRVPIPFIKKMRKGDANDPLLLQVMPRHQEFLTKSGFNKDPLLEQSNQQ-PGL 72

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           +H+Y  R+L+     C V CR+CFRR     +    L+ +    AL+YI+  + I EVI 
Sbjct: 73  LHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LNKRSLLDALSYIKSDNNINEVIL 130

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL+     +   L  L  +  ++ +R H+R+P+V P RI  EL + L  +   +  
Sbjct: 131 SGGDPLMAKDDAISWFLDELEQLPQIKRMRIHTRLPVVIPARITDELCERLARSPLKIVF 190

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
             H NH  E  ++  AA+ +L   G++L +Q+V+LK +ND      NL     +  + PY
Sbjct: 191 VNHINHANEIDDDFKAAMQKLKQVGVVLFNQAVILKDVNDTTAAQVNLSEALFDADVLPY 250

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
           YLH  D   G SHF ++ E+  KI+A L E + G   P  + ++ G   K  ID 
Sbjct: 251 YLHLLDKVEGASHFDISEEQAIKIMAELLEALPGFLVPKLVREIGGEKSKTPIDL 305


>gi|166711823|ref|ZP_02243030.1| hypothetical protein Xoryp_10295 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 342

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 94/323 (29%), Positives = 154/323 (47%), Gaps = 3/323 (0%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q + +  +   + L     +  +        +  + + +       +   + +DP+ RQ
Sbjct: 22  WQQQWRDAVRDPRVLLELLGLNAQAAAISDTAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+CFRR    
Sbjct: 82  VLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +++    +      A+A I     I EV+ +GGDPL L+  +L ++   L  I H++ LR
Sbjct: 142 AEE--SAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLR 199

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+PIV P+R++  L+  L+    PV   +HANH  EF      A+  L + G  LL+
Sbjct: 200 IHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDTAMHALRDTGAQLLN 259

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL G+ND  + LA L        + PYYLH  D  AG +HF +     + +   L  
Sbjct: 260 QAVLLGGVNDSVDALAALSERSFAAGVVPYYLHQLDRVAGVAHFEVDDARARALHTELAT 319

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++SG   P  + ++PG  GK  +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342


>gi|85711842|ref|ZP_01042897.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145]
 gi|85694239|gb|EAQ32182.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145]
          Length = 340

 Score =  357 bits (917), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 96/329 (29%), Positives = 159/329 (48%), Gaps = 7/329 (2%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            QL   K+    + L     +     +E  E    +S  +      L+   NP DP+ RQ
Sbjct: 12  WQLELAKSYKDPRQLLTTLGLDPNAFNEHLEAKKLFSFRVPRPFVELMEAGNPQDPLLRQ 71

Query: 60  FIPQKEELNILPEEREDPIGD----NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
            +P  +E  + P    DP+ +      H+  +G++H+Y  R+LL +   C + CR+CFRR
Sbjct: 72  VLPLADEFTVTPGYSTDPLNEVTDKREHAVPQGLLHKYASRVLLLVQGACAINCRYCFRR 131

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
               +    VL  K  +  + Y+++  ++ EVI +GGDPL  +   L ++   L  +K +
Sbjct: 132 HYPYADD--VLPRKQFDECVEYVRQNQEVNEVILSGGDPLFANDGYLIELADKLAELKQI 189

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
           + LR HSR+P+V PQR+   L   L +  + V + IHANH  E        ++     G+
Sbjct: 190 KRLRIHSRLPVVLPQRLTERLATHLTQRFEQVILVIHANHANEIGSSLKQHLATWRQRGV 249

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
            LL+QSVLLK INDD + L+ L     +  + PYYLH  D   G +HF ++    +++  
Sbjct: 250 TLLNQSVLLKAINDDADSLSQLSERLFDASVLPYYLHQLDPVQGAAHFAISDARARELWQ 309

Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDT 324
            +  ++ G   P  + ++P    K  I  
Sbjct: 310 QINARLPGFLVPKLVREIPNRDSKTPIMP 338


>gi|15606739|ref|NP_214119.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5]
 gi|4033496|sp|O67554|Y1632_AQUAE RecName: Full=Uncharacterized KamA family protein aq_1632
 gi|2983974|gb|AAC07521.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5]
          Length = 374

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 110/346 (31%), Positives = 174/346 (50%), Gaps = 34/346 (9%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           +++  ++        +LIN  NPNDPI R  IP  EEL +    + D   ++ +  + G+
Sbjct: 27  KVTEKFAFRTNTYYNSLINWDNPNDPIRRIVIPTTEELEV--WGKLDASNESKYMKVHGL 84

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            H+YPD  LL +  VC +YCRFCFR+ +  +    V   +D    L YI+   +I  V+ 
Sbjct: 85  EHKYPDTALLLVTDVCGIYCRFCFRKRLFMNDNDEVA--RDVSEGLEYIRNHPEINNVLL 142

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP-----ELIQCL-KEA 203
           TGGDPLIL+  +L+K+LK L  I HV+I+R  S++  V+P R+       EL +    E 
Sbjct: 143 TGGDPLILATFKLEKILKALAEIPHVRIVRIGSKMLAVNPFRVLDDPKLLELFEWFNTET 202

Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
           GK +Y+  H NHP E ++EA  A+  +   G  L +Q+ +LKGINDD E L  L+     
Sbjct: 203 GKKLYLMNHFNHPRELTKEARKAVELVQKTGTTLTNQTPILKGINDDFETLKTLLEELSF 262

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-FYILDLPGGYGKVKI 322
           + + PYY+      AG   +   IEE   +V +++ ++SGL     Y+  +    GK++I
Sbjct: 263 IGVPPYYVFQCRPTAGNKAYSTPIEETIDLVEAVRAEVSGLAARVRYV--MSHETGKIEI 320

Query: 323 ----------------DTHN-----IKKVGNGSYCITDHHNIVHDY 347
                           D  N     + K    ++   D+  +V +Y
Sbjct: 321 LGKTDEHIFFRYHRAADPENRGKFMVFKRNPEAHWFDDYTELVAEY 366


>gi|325926499|ref|ZP_08187819.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118]
 gi|325543148|gb|EGD14591.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118]
          Length = 342

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 155/323 (47%), Gaps = 3/323 (0%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q + +  +   + L     +  +        +  + + +       +   + +DP+ RQ
Sbjct: 22  WQQQWRDAVRDPRVLLQLLGLDAQAASISAAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+CFRR    
Sbjct: 82  VLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +++    +      A+  I     I EV+ +GGDPL L+  +L ++   L  I H++ LR
Sbjct: 142 AEE--TAARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAIPHLKRLR 199

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+PIV P+R++  L   L+    PV   +HANH  EF     AA+  L + G  LL+
Sbjct: 200 IHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRDTGAHLLN 259

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF +     + + A L  
Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++SG   P  + ++PG  GK  +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342


>gi|78048134|ref|YP_364309.1| putative radical SAM superfamily protein [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
 gi|78036564|emb|CAJ24255.1| putative radical SAM superfamily protein [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
          Length = 342

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 155/323 (47%), Gaps = 3/323 (0%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q + +  +   + L     +  +        +  + + +       +   + +DP+ RQ
Sbjct: 22  WQQQWRDAVRDPRVLLQLLGLDAQAAAISAAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+CFRR    
Sbjct: 82  VLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +++    +      A+  I     I EV+ +GGDPL L+  +L ++   L  I H++ LR
Sbjct: 142 AEE--TAARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAIPHLKRLR 199

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+PIV P+R++  L   L+    PV   +HANH  EF     AA+  L + G  LL+
Sbjct: 200 IHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRDTGAHLLN 259

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF +     + + A L  
Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++SG   P  + ++PG  GK  +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342


>gi|21243115|ref|NP_642697.1| hypothetical protein XAC2381 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21108633|gb|AAM37233.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 342

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 94/323 (29%), Positives = 152/323 (47%), Gaps = 3/323 (0%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q + +  +   + L     +  +        +  + + +       +   + +DP+ RQ
Sbjct: 22  WQQQWRDAVRDPRVLLQLLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E+   P    D +GD       G++ +Y  R LL     C  +CR+CFRR    
Sbjct: 82  VLPLDAEMQPAPGFGLDAVGDGAARTAAGVIQKYRGRALLIATGSCAAHCRYCFRRHFPY 141

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +++    +      A+A I     I EV+ +GGDPL L+  +L ++   L  + H++ LR
Sbjct: 142 AEE--TAARDGWRDAVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAVPHLKRLR 199

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+PIV P+R++  L   L+    PV   +HANH  EF     AA   L   G  LL+
Sbjct: 200 IHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLRETGAQLLN 259

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF +     + + A L  
Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++SG   P  + ++PG  GK  +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342


>gi|289207649|ref|YP_003459715.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp.
           K90mix]
 gi|288943280|gb|ADC70979.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp.
           K90mix]
          Length = 348

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 107/322 (33%), Positives = 169/322 (52%), Gaps = 3/322 (0%)

Query: 1   MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q    + +     L     +    +  +      + + +       +   +P DP+  Q
Sbjct: 24  WQQALARAIRDPVTLARELELDPAHLPGLHAGHTLFRVRVPRSYLARMRKADPQDPLLLQ 83

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +PQ++E    P    DP+GD++     G+VH+Y  R+LL     C V+CR+CFRRE   
Sbjct: 84  VLPQQQESEEHPGFVADPVGDHDALAAPGLVHKYHGRVLLLTTGACAVHCRYCFRREFPY 143

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           ++     S  D   A+AYI   + I EVI +GGDPL LS +RL  +++ L  I H++ LR
Sbjct: 144 AEH--NASQDDWAPAIAYIHADTSIREVILSGGDPLSLSDRRLADLVRRLEAIPHLERLR 201

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P+R++ +L+  L +      + +HANHP EF++ A  A++RL   GI LL+
Sbjct: 202 IHTRLPVVLPERVDEQLLSWLGKGRLHHVLVLHANHPREFADPAAPALARLQARGITLLN 261

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL GINDDP+ L  L        + PYYLH  D   GT+HF +T     ++  +L  
Sbjct: 262 QAVLLAGINDDPDTLCELQEAGFRHGVLPYYLHLLDRTRGTAHFEVTEHRALELHQALHA 321

Query: 300 KISGLCQPFYILDLPGGYGKVK 321
           ++ G   P  + ++PG  GK  
Sbjct: 322 RLPGYLVPRLVREIPGEPGKTP 343


>gi|293609733|ref|ZP_06692035.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828185|gb|EFF86548.1| conserved hypothetical protein [Acinetobacter sp. SH024]
          Length = 338

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 99/292 (33%), Positives = 154/292 (52%), Gaps = 2/292 (0%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
            S  + + +       +N  NP DP+  Q +P   EL   PE   DP+G+   + L G++
Sbjct: 43  ASEKFKLRVPRAFVGKMNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R LL L   C V+CR+CFRR     +   +  ++D      YI+    I E+I +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIEANPNINEIILS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL LS+++L   L+ L  +K ++ILR HSRVPIV P RI+ +LI  LK +   + + 
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQIEILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H+NH  E  +   + + +L++  I +L+Q+VLLKG+ND  + L +L     E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           LH  D   G  HF L   +   I   +   + G   P  + ++ G   K  +
Sbjct: 281 LHVLDKVKGAQHFDLESSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332


>gi|288941476|ref|YP_003443716.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum
           DSM 180]
 gi|288896848|gb|ADC62684.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum
           DSM 180]
          Length = 335

 Score =  355 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 2/319 (0%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           R    T   +L     + + +I ++      + + +       +   +P+DP+ RQ +P 
Sbjct: 18  RVTAFTQVDELLAFLELDRTRIPDLDAEPESWGLRVPRTFVERMRRGDPDDPLLRQVLPL 77

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
             E   +     DP+GD       G++ +Y  R LL +   C ++CR+CFRR      + 
Sbjct: 78  TAERQQVAGYVTDPVGDACAERAPGLLVKYAGRALLMVTGACAIHCRYCFRRHFPY--QD 135

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
              S    E AL  I     + EV+ +GGDPL+L   RL  +++ L  I H+Q LR HSR
Sbjct: 136 LGPSQARLERALDEIARDPSLTEVVLSGGDPLMLDDDRLDALIRDLECITHLQRLRLHSR 195

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           VP+V P R+   L   L        + IHANHP E  E   +A+     AG+ LL+QSVL
Sbjct: 196 VPVVSPSRLTARLAASLTRGRFASTLVIHANHPRELDEVVRSALLDWRAAGVTLLNQSVL 255

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+ND  EILA L        + PYYLH  D  AG++HF +   E ++++  ++ ++ G
Sbjct: 256 LRGVNDRIEILAELSERLFACGVLPYYLHGLDPVAGSAHFEVDDAEARRLLDGVRARLPG 315

Query: 304 LCQPFYILDLPGGYGKVKI 322
              P  + ++PG + K  +
Sbjct: 316 YLVPRLVREIPGDHSKRPL 334


>gi|260549729|ref|ZP_05823946.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624]
 gi|260407246|gb|EEX00722.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624]
          Length = 338

 Score =  355 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 103/292 (35%), Positives = 152/292 (52%), Gaps = 2/292 (0%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
            S  + + +       +N  NP DP+  Q +P   EL   PE   DP+G+   + L G++
Sbjct: 43  ASEKFKLRVPRAFVGKMNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R LL L   C V+CR+CFRR     +   +  + D      YI+    I EVI +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNDDWLNIKNYIEANPDINEVILS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL LS+++L   L+ L  +K V+ILR HSRVPIV P RI+ ELI  LK +   + + 
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H+NH  E  +   + +  L++  I +L+Q+VLLKG+ND  + L +L     E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLMELSSHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           LH  D   G  HF L   E   I   +   + G   P  + ++ G   K  +
Sbjct: 281 LHVLDKVKGAQHFDLMPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|169795200|ref|YP_001712993.1| hypothetical protein ABAYE1057 [Acinetobacter baumannii AYE]
 gi|184158947|ref|YP_001847286.1| lysine 2,3-aminomutase [Acinetobacter baumannii ACICU]
 gi|213158137|ref|YP_002320188.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057]
 gi|215482748|ref|YP_002324946.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii
           AB307-0294]
 gi|301346998|ref|ZP_07227739.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB056]
 gi|301511118|ref|ZP_07236355.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB058]
 gi|301596429|ref|ZP_07241437.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB059]
 gi|332857081|ref|ZP_08436387.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150]
 gi|332870019|ref|ZP_08438995.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113]
 gi|332874730|ref|ZP_08442600.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059]
 gi|169148127|emb|CAM85990.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
 gi|183210541|gb|ACC57939.1| Lysine 2,3-aminomutase [Acinetobacter baumannii ACICU]
 gi|193077935|gb|ABO12838.2| putative aminomutase [Acinetobacter baumannii ATCC 17978]
 gi|213057297|gb|ACJ42199.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057]
 gi|213987501|gb|ACJ57800.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii
           AB307-0294]
 gi|322508931|gb|ADX04385.1| lysine 2,3-aminomutase [Acinetobacter baumannii 1656-2]
 gi|323518917|gb|ADX93298.1| lysine 2,3-aminomutase [Acinetobacter baumannii TCDC-AB0715]
 gi|332726896|gb|EGJ58410.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150]
 gi|332732519|gb|EGJ63770.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113]
 gi|332736991|gb|EGJ67948.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059]
          Length = 338

 Score =  355 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 2/292 (0%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
            S  + + +       +N  +P DP+  Q +P   EL   PE   DP+G+   + L G++
Sbjct: 43  ASEKFKLRVPRAFVGKMNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R LL L   C V+CR+CFRR     +   +  ++D      YI+    I EVI +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL LS+++L   L+ L  +K V+ILR HSRVPIV P RI+ ELI  LK +   + + 
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H+NH  E  +   + + +L+   I +L+Q+VLLKG+ND  + L +L     E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           LH  D   G  HF L   E   I   +   + G   P  + ++ G   K  +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|169632907|ref|YP_001706643.1| hypothetical protein ABSDF1142 [Acinetobacter baumannii SDF]
 gi|169151699|emb|CAP00492.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 338

 Score =  355 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 103/292 (35%), Positives = 153/292 (52%), Gaps = 2/292 (0%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
            S  + + +       +N  +P DP+  Q +P   EL   PE   DP+G+   + L G++
Sbjct: 43  ASEKFKLRVPRAFVGKMNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R LL L   C V+CR+CFRR     +   +  ++D      YI+    I EVI +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL LS+++L   L+ L  +K V+ILR HSRVPIV P RI+ ELI  LK +   + + 
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H+NH  E  +   + + +L+   I +L+Q+VLLKG+ND  + L +L     E RI PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARIMPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           LH  D   G  HF L   E   I   +   + G   P  + ++ G   K  +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|217077357|ref|YP_002335075.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus
           TCF52B]
 gi|217037212|gb|ACJ75734.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus
           TCF52B]
          Length = 370

 Score =  355 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 112/371 (30%), Positives = 186/371 (50%), Gaps = 34/371 (9%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           ++   +T  + +     + +E+ +++K+++  Y          LIN  +PNDPI    IP
Sbjct: 1   MQVNYITKIEKVPQ---LSEEEKNKLKKVTEKYKFRANDYYLKLINWDDPNDPIRNLIIP 57

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
           Q  EL      R D   + +++  KG+ H+Y D  LL +  VC  +CRFCFR+ +  +  
Sbjct: 58  QIGELEE--WGRLDASNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINVG 115

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
             V+  +D    L YI++  +I  V+ TGGDPL+L+ K+L+K++  +R I HVQI+R  S
Sbjct: 116 EEVV--RDVSEDLEYIKKHKEITNVLLTGGDPLLLATKKLEKIISQIREIDHVQIIRIGS 173

Query: 183 RVPIVDPQRIN--PELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           ++   +P RI   PELI+ +K+     K +YI    NHP E ++EAI A++ L  AG IL
Sbjct: 174 KMVAFNPYRITEDPELIELIKKYSTDEKKIYIMTQFNHPREITKEAIKAVNMLQKAGAIL 233

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            +Q+ L+KG+N D + L  L +    + + PYY+      AG   F + +EE  +I    
Sbjct: 234 ANQTPLIKGVNADWKTLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEAYQIFLKA 293

Query: 298 KEKISGLCQPFYILDLPGGYGKVKI----------------DTHN-----IKKVGNGSYC 336
              +SGL +      +    GK+++                D  N     + K    +Y 
Sbjct: 294 IMNVSGLAKRARFA-MSHETGKIEVSALTKEHVIFRYQRAHDPKNAGKIMVYKRNPNAYW 352

Query: 337 ITDHHNIVHDY 347
             D+  +V +Y
Sbjct: 353 FDDYTELVEEY 363


>gi|90407173|ref|ZP_01215361.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3]
 gi|90311749|gb|EAS39846.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3]
          Length = 338

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 3/318 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            + + Q L     +  E     +    ++ + +       +   + NDP+ RQ +P  +E
Sbjct: 23  AIKNPQQLLELLDLNPEMFALSEPARKNFPMLVPLPFIKKMKKGDINDPLLRQVLPITDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
              +     DP+ ++++S ++G++H+Y  RILL L   C V CR+CFRR      +   L
Sbjct: 83  DKQVEGYSIDPLLEHDNS-IQGVLHKYKSRILLVLKSGCAVNCRYCFRRHFPY--QDNNL 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + K     + Y++    + EVI +GGDPL+     L  V+  L+ +K ++ LR H+R+P+
Sbjct: 140 NKKQLAEVILYLKAHPDVNEVILSGGDPLMSKDDFLDYVINELQQLKQLKRLRIHTRLPV 199

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V PQR+   L + LK     V   +H NH +E  +    A+ +L +AGI LL+QSVLL+G
Sbjct: 200 VIPQRVTDRLCEILKATRLQVVFVVHINHAHEIDKAFKIAMLKLHHAGIQLLNQSVLLRG 259

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +ND+ E L  L     +  I PYYL   D   G  HF L  ++ + ++  +   + G   
Sbjct: 260 VNDNAEALVALSEALFDAHILPYYLFLLDKVQGAQHFDLEEQKAKALLLEISAALPGYLV 319

Query: 307 PFYILDLPGGYGKVKIDT 324
           P    ++ G   K  I  
Sbjct: 320 PRLSREIAGEKSKTLITP 337


>gi|260556680|ref|ZP_05828898.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606]
 gi|260409939|gb|EEX03239.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606]
          Length = 338

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 2/292 (0%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
            S  + + +       +N  +P DP+  Q +P   EL   PE   DP+G+   + L G++
Sbjct: 43  ASEKFKLRVPRAFVGKMNVKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R LL L   C V+CR+CFRR     +   +  ++D      YI+    I EVI +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL LS+++L   L+ L  +K V+ILR HSRVPIV P RI+ ELI  LK +   + + 
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H+NH  E  +   + + +L+   I +L+Q+VLLKG+ND  + L +L     E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           LH  D   G  HF L   E   I   +   + G   P  + ++ G   K  +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|239501163|ref|ZP_04660473.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB900]
          Length = 338

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 2/292 (0%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
            S  + + +       +N  +P DP+  Q +P   EL   PE   DP+G+   + L G++
Sbjct: 43  ASEKFKLRVPRAFVGKMNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R LL L   C V+CR+CFRR     +   +  ++D      YI+    I EVI +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL LS+++L   L+ L  +K V+ILR HSRVPIV P RI+ ELI  LK +   + + 
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H+NH  E  +   + + +L+   I +L+Q+VLLKG+ND  + L +L     E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSGHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           LH  D   G  HF L   E   I   +   + G   P  + ++ G   K  +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|160901658|ref|YP_001567239.1| lysine 2,3-aminomutase [Petrotoga mobilis SJ95]
 gi|160359302|gb|ABX30916.1| Lysine 2,3-aminomutase [Petrotoga mobilis SJ95]
          Length = 370

 Score =  355 bits (911), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 104/364 (28%), Positives = 180/364 (49%), Gaps = 31/364 (8%)

Query: 11  AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
              L     I +E++ E++ +   Y         +LIN  + NDPI +  IP  EEL   
Sbjct: 6   VTKLEKVKGISQEELKELQPVEEKYKFRANEYYLDLINWKDKNDPIRKIIIPSVEELEE- 64

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
               ED   +++++  KG+ H+Y D  LL +  VC  +CRFCFR+ +  +    V+ +++
Sbjct: 65  -WGLEDASREHSYTISKGLQHKYRDTALLLVNDVCGSFCRFCFRKRLFKNVGKEVVRTRE 123

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
            +  L YI++  +I  V+ TGGDPL+LS  +L+ +++++  I H++I+R  ++ P  +P 
Sbjct: 124 IDKDLDYIRKHEEITNVLLTGGDPLLLSTNKLKSIIESINEIDHIKIIRIGTKTPAFNPF 183

Query: 191 RI--NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           RI  +  L   +K+   +GK +Y  +H NHP E +  +I  I+ L N+G I+ +Q+ LL 
Sbjct: 184 RIISDDALSNLIKKITNSGKKLYFIVHFNHPRELTSASIQGINILQNSGAIIANQTPLLH 243

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GIND+P+ L+ L +      I PYY+       G   F + +E+   I     E ISGL 
Sbjct: 244 GINDNPKTLSTLFKKLSFNGIPPYYVFQNRPVMGNKGFTIPLEKAYSIFLESLEDISGLA 303

Query: 306 -QPFYILDLPGGYGKVKIDT---------------------HNIKKVGNGSYCITDHHNI 343
            +P ++  +    GK+++                         + K    +Y   D+  +
Sbjct: 304 KRPRFV--MSHESGKIEVAALTSKNIIFRYHRSHNLDNYGKFFVFKRNPQAYWFDDYKEL 361

Query: 344 VHDY 347
           V  Y
Sbjct: 362 VEIY 365


>gi|15839064|ref|NP_299752.1| hypothetical protein XF2474 [Xylella fastidiosa 9a5c]
 gi|9107671|gb|AAF85272.1|AE004055_10 conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 357

 Score =  354 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 2/321 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q+  + +   ++L     +    +   +  +  + + +       +   + +DP+ RQ +
Sbjct: 39  QVWREAIRDPRELLALLRLDPTSVGISEAAAAQFPLRVPRGFVARMRVGDLHDPLLRQVL 98

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E + +     D +GD       GI+ +Y  RILL     C V+CR+CFRR    ++
Sbjct: 99  PMDAEEDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 158

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                S      A A+++    I EVI +GGDPL LS  +L ++   LR I H++ LR H
Sbjct: 159 D--TASHDRWREAAAFVRADPLIEEVILSGGDPLSLSTAKLVELTDALRSIPHLKRLRIH 216

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P+RI+  L++ L     PV   IHANH  EF     AA++ L   G  LL+Q+
Sbjct: 217 SRLPVVLPERIDTPLLEWLGALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 276

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+ND+   LA L        + PYYLH  D  AGT+H+ +     + + A L  ++
Sbjct: 277 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARALHAELVARL 336

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
           SG   P ++ ++PG   K  +
Sbjct: 337 SGYLVPRFVREVPGDSSKRPL 357


>gi|126179733|ref|YP_001047698.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus
           marisnigri JR1]
 gi|125862527|gb|ABN57716.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1]
          Length = 386

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 102/359 (28%), Positives = 176/359 (49%), Gaps = 29/359 (8%)

Query: 11  AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70
              L +   I  E+   + E+++ ++        +LI+  +P DPI R  +P  EEL   
Sbjct: 20  VSSLDSVPGIDPEERARLAEVTDLFAFRANDYYLSLIDWDDPADPIRRLIVPTVEELE-- 77

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
           P    DP  ++ ++   G+ H+Y +  LL +  +C   CR+CFR+ +   +   V  +KD
Sbjct: 78  PWGHLDPSSEHRYTRAPGLQHKYRETALLLVSDLCGGLCRYCFRKRLFIEEAREV--NKD 135

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
             A LAYI++  +I  V+ TGGDPL L   R+  +++ +R I+HV I+R  +++P  +P 
Sbjct: 136 ISAGLAYIRDHPEITNVLLTGGDPLFLETGRVLDIVRQVREIEHVGIIRIGTKMPAYNPF 195

Query: 191 RI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           RI  +P L+  +++     K +YI    NHP E ++ A  A++ L  AG ++++Q+ L++
Sbjct: 196 RIINDPALLDMIRDYSMDEKRIYIMAQFNHPRELTDAACRAVALLQEAGAVVMNQTPLIR 255

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GINDDPE+LA L      +   PYY+     A G   F + +EE  +I    +   SGL 
Sbjct: 256 GINDDPEVLAALFDKLSFIGANPYYVFQCRPAIGNRTFAVPVEESYRIFEQARSICSGLA 315

Query: 306 QP-FYILDLPGGY----GKV---------------KIDTHNIKKVGNGSYCITDHHNIV 344
           +   +++    G     GK                 +    + K    +Y   D+  +V
Sbjct: 316 KRARFVISHATGKIEVLGKTDRYTYFKYNQATNPEDLGRFMVYKSNPEAYWFDDYTELV 374


>gi|160872273|ref|ZP_02062405.1| radical SAM domain protein [Rickettsiella grylli]
 gi|159121072|gb|EDP46410.1| radical SAM domain protein [Rickettsiella grylli]
          Length = 328

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 99/322 (30%), Positives = 162/322 (50%), Gaps = 3/322 (0%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q    + +    +L +   +  + +   +  S  + + +     + +   NP DP+ +Q
Sbjct: 5   WQTFLKEAVADPAELLDRLALNPQLLSAAQHASRLFPLRVPSGFIDRMQKGNPADPLLQQ 64

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E  I  +  +DP+ +N  +PL G++H+Y  RILL +   C + CR+CFRR    
Sbjct: 65  VLPIAAEARIQADFSDDPLQENAANPLPGLLHKYYGRILLTMTGACAINCRYCFRRHFPY 124

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
            +    +  K   A +AYIQ  + I EVI +GGDPL+     L+  +  L  I HV+I+R
Sbjct: 125 GKN--KVGGKAWHAIVAYIQADTSIREVILSGGDPLLAQDDYLKHRINDLAAIPHVKIVR 182

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+PIV P+R+   L+  L        +  H NH  E ++    AI +     I +L+
Sbjct: 183 IHSRLPIVIPERMTTPLLNALTGTRLQPVLVTHCNHANELNDSVQQAIEKCRQRKIHVLN 242

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLLKG+ND  E L +L     E  I PYYLH  D   G +HF +  E+ + ++ +L+E
Sbjct: 243 QAVLLKGVNDSVEALVHLSERLFECGILPYYLHRLDKVQGATHFTVNEEKMKPLLKALRE 302

Query: 300 KISGLCQPFYILDLPGGYGKVK 321
           ++ G   P  + +  G   K+ 
Sbjct: 303 RLPGYLVPKCVYEQAGALSKMP 324


>gi|84624209|ref|YP_451581.1| hypothetical protein XOO_2552 [Xanthomonas oryzae pv. oryzae MAFF
           311018]
 gi|84368149|dbj|BAE69307.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
           311018]
          Length = 342

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 93/323 (28%), Positives = 153/323 (47%), Gaps = 3/323 (0%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q + +  +   + L     +  +        +  + + +       +   + +DP+ RQ
Sbjct: 22  WQQQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+CFRR    
Sbjct: 82  VLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +++    +      A+A I     I EV+ +GGDPL L+  +L ++   L  I H++ LR
Sbjct: 142 AEE--TAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLR 199

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+PIV P+R++  L+  L+    P    +HANH  EF      A+  L + G  LL+
Sbjct: 200 IHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRDTGAQLLN 259

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL G+ND  + LA L        + PYYLH  D  AG +HF +     + +   L  
Sbjct: 260 QAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHTELAT 319

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++SG   P  + ++PG  GK  +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342


>gi|208779105|ref|ZP_03246451.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida
           FTG]
 gi|208744905|gb|EDZ91203.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida
           FTG]
          Length = 328

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 99/319 (31%), Positives = 163/319 (51%), Gaps = 4/319 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + +S  +L     I  E+       +  + + +    A+ +   N NDP+ +Q +P  +E
Sbjct: 13  SFSSPLELLEFLEIDSEEAKVSLNTAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I      DP+ + N++ + G++H+Y  R+LL     C V+CR+CFR+E     K  + 
Sbjct: 73  EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             KD   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQQIPHIKRLRIHSRIPV 190

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+R+  +L++ L E      + IH NHP E  +     +  +   GII L+QS LLK 
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDDNVSKVLKEIHKHGIITLNQSTLLKD 250

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD  +L  L    +  ++ PYY+H  D  +GT H+ +  +  + I+  L E  SG   
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMV 308

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++PG   K  +  H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327


>gi|254372685|ref|ZP_04988174.1| hypothetical protein FTCG_00250 [Francisella tularensis subsp.
           novicida GA99-3549]
 gi|151570412|gb|EDN36066.1| hypothetical protein FTCG_00250 [Francisella novicida GA99-3549]
          Length = 328

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 99/319 (31%), Positives = 163/319 (51%), Gaps = 4/319 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + +S  +L     I  E+       +  + + +    A+ +   N NDP+ +Q +P  +E
Sbjct: 13  SFSSPLELLEFLEIDSEEAKVSLNTAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I      DP+ + N++ + G++H+Y  R+LL     C V+CR+CFR+E     K  + 
Sbjct: 73  EVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             KD   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRIAHIKRLRIHSRIPV 190

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+R+  +L++ L E      + IH NHP E        +  +   GII+L+QS LLK 
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD  +L  L    +  ++ PYY+H  D  +GT H+ +  +  + I+  L E  SG   
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMV 308

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++PG   K  +  H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327


>gi|254283526|ref|ZP_04958494.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
           NOR51-B]
 gi|219679729|gb|EED36078.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
           NOR51-B]
          Length = 356

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 101/335 (30%), Positives = 159/335 (47%), Gaps = 12/335 (3%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQID---------EIKEISNHYSIALTPVIANLINPHNP 52
           QLR+  + S   L ++  +    ++         + +  +  + +       + + P +P
Sbjct: 23  QLRN-AVRSVSALLDSLNLTPADVEHGEPKTRGEDAERAAQDFPVRAPQSFIDRMRPGDP 81

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           NDP+ RQ +    E   +P   EDP+ + + +P  GIVH+Y  R+LL     C V+CR+C
Sbjct: 82  NDPLLRQVLAVSAEQQHVPGYVEDPLQERDANPTPGIVHKYQGRLLLMPTAACAVHCRYC 141

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           FRR    +     L     + A+ Y+  + ++ EVI +GGDPLIL    L +++  L  +
Sbjct: 142 FRRHFPYA--DNRLDEGALDRAMDYLASQPEVTEVILSGGDPLILDDAALGRLIDRLESL 199

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
            H+  LR HSR+P+V P R+   L + L  +     + +H NHP E        + R   
Sbjct: 200 GHLSRLRIHSRLPVVLPDRLTEALAERLDASRLSTSLVLHGNHPAEIDAGLTERLQRWRP 259

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           A + LL+QSVLL G+NDDP +L  L     E  + PYYLH  D  AG  HF +  E+   
Sbjct: 260 ASLTLLNQSVLLAGVNDDPAVLIALSERLFEAGVLPYYLHLLDPVAGVGHFAVADEQALA 319

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
           I   +  K+ G   P    +LP    K       +
Sbjct: 320 IYRQMAAKLPGYLLPKLARELPDLPSKTTYGLDTL 354


>gi|28199372|ref|NP_779686.1| hypothetical protein PD1491 [Xylella fastidiosa Temecula1]
 gi|182682099|ref|YP_001830259.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23]
 gi|28057478|gb|AAO29335.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
 gi|182632209|gb|ACB92985.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23]
 gi|307578366|gb|ADN62335.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa
           subsp. fastidiosa GB514]
          Length = 342

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 99/321 (30%), Positives = 160/321 (49%), Gaps = 2/321 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q+  + +   ++L     +    +   +  +  + + +       +   + +DP+ RQ +
Sbjct: 24  QVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVTRMRVGDLHDPLLRQVL 83

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E + +     D +GD       GI+ +Y  RILL     C V+CR+CFRR    ++
Sbjct: 84  PMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 143

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                S      A A+++    I EVI +GGDPL LS  +L ++   LR   H++ LR H
Sbjct: 144 D--TASHDRWREAAAFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGTPHLKRLRIH 201

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P+RI+  L++ L     PV   IHANH  EF     AA++ L   G  LL+Q+
Sbjct: 202 SRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 261

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+ND+   LA L        + PYYLH  D  AGT+H+ +     + + A L  ++
Sbjct: 262 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVARL 321

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
           SG   P ++ ++PG   K  +
Sbjct: 322 SGYLVPRFVREVPGDSSKRPL 342


>gi|308048933|ref|YP_003912499.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica
           DSM 9799]
 gi|307631123|gb|ADN75425.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica
           DSM 9799]
          Length = 400

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 99/320 (30%), Positives = 178/320 (55%), Gaps = 7/320 (2%)

Query: 29  KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPL-K 87
            ++    +  +TP +A L++ ++PN PI  Q++P+++E++I P E  D + +++  P   
Sbjct: 75  DDVYKVIAARITPYVAQLMDKNDPNCPIRIQYVPEQDEMHIAPHEMGDQLAEDDMMPEGT 134

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
            +VHRYP+R+L  + ++C  YCR C R+ MV S    V+       ++ Y+++  ++ +V
Sbjct: 135 SLVHRYPNRVLFLVHNICGAYCRHCTRKRMV-SDPLNVIDMARIRRSVEYLRDHPEVQDV 193

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           + +GGDPL+L+  +L ++L  +R     ++ILR  SR+    P R+ PEL+  L +    
Sbjct: 194 LLSGGDPLLLTDSKLDEILSMIREARPDLKILRIGSRLLAQLPTRVTPELVDVLVKNRVT 253

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
           + I    NHP E +   I   + L  AG++L +QSV++KG+NDD E++ +L+   V   I
Sbjct: 254 L-INTQVNHPREITPLFIKHTTMLRRAGVMLGNQSVMIKGVNDDVEVMRDLVMDLVSNGI 312

Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
           +PYY++  D A G S F ++ +   +I   ++  +SG   P +I+D  GG GK+ +    
Sbjct: 313 RPYYVYSMDPAPGNSKFMVSYDRMLEIYHGIRGWVSGPAIPTFIVDGIGGLGKMPVQPEY 372

Query: 327 IKKV---GNGSYCITDHHNI 343
           +KK    G      T+    
Sbjct: 373 VKKTVQDGETKLIATNFEGR 392


>gi|242280374|ref|YP_002992503.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           salexigens DSM 2638]
 gi|242123268|gb|ACS80964.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio
           salexigens DSM 2638]
          Length = 353

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 113/355 (31%), Positives = 177/355 (49%), Gaps = 20/355 (5%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q+++  + + + L     +  ++ + I  ++       TP +A+L++  +PN PI  Q I
Sbjct: 7   QMKN-MVDNLERLKQYINVTPDEEEAINTLNTK--WGTTPHMASLMDKDDPNCPIRMQAI 63

Query: 62  PQKEELNILPEEREDPI------GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           P  +E     E   D         D        I  +Y DRI   +  +C  YCR CFR+
Sbjct: 64  PSLKETKN--EFGLDNYLVWKENRDTEEKRPDCIARQYVDRIAFTVTDICANYCRHCFRK 121

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
           E+V  +   +    D E  + +I+E  +I +V+ TGGDPL+LS  R+  +LK+LR I HV
Sbjct: 122 ELVVDKNLEL--RFDLEEGIDWIREHEEIRDVLVTGGDPLLLSDDRIDHLLKSLRSIDHV 179

Query: 176 QILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           +++RF SRVPI  PQRI PEL++ L  +   PV++    NHP E +     A+  L  AG
Sbjct: 180 EMIRFGSRVPIAMPQRITPELLEVLGGDHEVPVWLNTQCNHPKELTPRTRKAVYDLLTAG 239

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
           + + +Q VLLKGINDD E   +L +  ++ RI+PYY+ + + A G  HFR      + I 
Sbjct: 240 VNVGNQMVLLKGINDDVETFRHLHQKLLQYRIRPYYVFYCEPAPGIDHFRT---RAELIR 296

Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI-KKVGNGSYCITDHHNIVHDYP 348
             L+   +GL QP Y+       GK+ +          +  Y   +H       P
Sbjct: 297 DGLRGHTTGLAQPMYVC--ATNIGKIPLMPDYYCVDKNDKEYTFRNHRWQTTTMP 349


>gi|56707865|ref|YP_169761.1| hypothetical protein FTT_0750 [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670336|ref|YP_666893.1| hypothetical protein FTF0750 [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134301708|ref|YP_001121676.1| hypothetical protein FTW_0659 [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|224456943|ref|ZP_03665416.1| hypothetical protein FtultM_04156 [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254370360|ref|ZP_04986365.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874680|ref|ZP_05247390.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604357|emb|CAG45383.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320669|emb|CAL08766.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC198]
 gi|134049485|gb|ABO46556.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella
           tularensis subsp. tularensis WY96-3418]
 gi|151568603|gb|EDN34257.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254840679|gb|EET19115.1| conserved hypothetical protein [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|282159045|gb|ADA78436.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella
           tularensis subsp. tularensis NE061598]
          Length = 328

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 101/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + +S  +L     I  E+      I+  + + +    A+ +   N NDP+ +Q +P  +E
Sbjct: 13  SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I      DP+ + N++ + G++H+Y  R+LL     C V+CR+CFR+E     K  + 
Sbjct: 73  EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             KD   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+RI  +L++ L E      + IH NHP E        +  +   GII+L+QS LLK 
Sbjct: 191 VLPERITTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD  +L  L    +  ++ PYY+H  D  +GT H+ +  ++   I+  L E  SG   
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++PG   K  +  H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327


>gi|262372891|ref|ZP_06066170.1| lysine 2,3-aminomutase [Acinetobacter junii SH205]
 gi|262312916|gb|EEY94001.1| lysine 2,3-aminomutase [Acinetobacter junii SH205]
          Length = 338

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 106/324 (32%), Positives = 165/324 (50%), Gaps = 4/324 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q +    +T   +L N   +  EQ+       S  + + +       ++  +P DP+  
Sbjct: 11  WQSQLSDLITDPLELLNLLELSTEQLLSGAIFASEQFKLRVPRAFVGKMSIGDPFDPLLL 70

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +P   EL   PE   DP+G+   + + G++H+Y  R LL L   C ++CR+CFRR   
Sbjct: 71  QVLPHHLELEDHPEFVTDPLGEEAANQMAGVLHKYQSRFLLTLTGACAIHCRYCFRRHFP 130

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +   +  + D      YI++  QI EVI +GGDPL LS+++L   L+ L  +  ++IL
Sbjct: 131 YQEN--LPKNDDWINIKQYIEQNPQINEVILSGGDPLTLSNRKLSLWLERLASLPQIKIL 188

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R HSRVP+V P RI+ ELI  LK +   + + IH+NH  E  +   + + +L+   I +L
Sbjct: 189 RIHSRVPVVIPNRIDEELISILKNSRLRIVVVIHSNHAAELDDFTCSKLLQLSEHHITVL 248

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLLKG+ND  EIL NL     + R+ PYYLH  D   G  HF L   E   I   + 
Sbjct: 249 NQAVLLKGVNDSAEILNNLSLRLFDARVMPYYLHVLDKVKGAQHFDLRSSEIDHIYTDVL 308

Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
             + G   P  + ++ G   K  +
Sbjct: 309 ASLPGYLVPKLVREIAGEKNKTPL 332


>gi|317129675|ref|YP_004095957.1| lysine 2,3-aminomutase YodO family protein [Bacillus
           cellulosilyticus DSM 2522]
 gi|315474623|gb|ADU31226.1| lysine 2,3-aminomutase YodO family protein [Bacillus
           cellulosilyticus DSM 2522]
          Length = 388

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 115/339 (33%), Positives = 179/339 (52%), Gaps = 15/339 (4%)

Query: 14  LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73
           +     I +E+  ++K+I+  +   +     NLI+ +NPNDPI +  IP + EL      
Sbjct: 10  IDKITQIPEEERAKLKKITEKFVFRVNDYYLNLIDWNNPNDPIKKLIIPNEGELEE--YG 67

Query: 74  REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           R D   ++ +    G  H+Y    LL +  VC  YCR+CFR+ +   +     +  D + 
Sbjct: 68  RWDASDEDTNYAAPGCQHKYGTTALLIVSEVCGAYCRYCFRKRLF--RNDIKEAMADVQP 125

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI- 192
            + YI+   QI  V+ TGGD LIL+ K+L+ +++ LR I HV+I+R  S++P+ +P RI 
Sbjct: 126 GIEYIKNNPQINNVLLTGGDSLILATKKLRLIIEQLREIPHVKIIRLGSKMPVFNPMRIY 185

Query: 193 -NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
            + EL+  +KE   P   +Y+  H NHP E +EEA      L NAG I+++Q+ +LKGIN
Sbjct: 186 EDQELLDLIKEYSTPEQRIYVMAHINHPVEITEEAKKGFDALHNAGAIVVNQTPVLKGIN 245

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           DDPE+LA L+       + PYY       AG + F LT+EE    V + K K SGL +  
Sbjct: 246 DDPEVLAELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEAYNAVEAAKAKTSGLGKRV 305

Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
             L +    GK+++       + NG   +  H +   DY
Sbjct: 306 R-LSMSHTSGKIEV-----LAIDNGKAYLKYHQSRDGDY 338


>gi|325921161|ref|ZP_08183030.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865]
 gi|325548355|gb|EGD19340.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865]
          Length = 342

 Score =  352 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 3/323 (0%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q + +  +   ++L     +         E +  + + +       +   + +DP+ RQ
Sbjct: 22  WQQQWRDAVRDPRELLALLGLDAAAAGISAEAAAQFPLRVPRAFVARMRRGDLHDPLLRQ 81

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E+ ++P    D +GD       G++ +Y  R LL     C V+CR+CFRR    
Sbjct: 82  VLPLDAEMRLVPGFGLDAVGDGAAKIADGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +++    +      A+A I     I EV+ +GGDPL L+  +L ++   L  I H++ LR
Sbjct: 142 AEE--TAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATSKLAELTDALAAIGHIKRLR 199

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+P+V P+R++  L+  L+    PV   IHANH  EF     AA+  + + G  LL+
Sbjct: 200 IHSRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFDSTVDAAMRAMRDTGAQLLN 259

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF +     + +   L  
Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDAHARALHTELAT 319

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++SG   P  + ++PG  GK  +
Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342


>gi|299769252|ref|YP_003731278.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1]
 gi|298699340|gb|ADI89905.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1]
          Length = 338

 Score =  352 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 2/292 (0%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
            S  + + +       +N  NP DP+  Q +P   EL   PE   DP+G+   + L G++
Sbjct: 43  ASEQFKLRVPRAFVGKMNAKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R LL L   C V+CR+CFRR     +   +  + D      YI+    I E+I +
Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNDDWLNIKNYIEANPHINEIILS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL LS+++L   L+ L  +K ++ILR HSRVPIV P RI+ ELI  LK +   + + 
Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIVLV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H+NH  E  +   + + +L+   I +L+Q+VLLKG+ND  + L +L     E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           LH  D   G  HF L   E   I   +   + G   P  + ++ G   K  +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332


>gi|254369527|ref|ZP_04985538.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
 gi|157122481|gb|EDO66616.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 328

 Score =  352 bits (905), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 99/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + +S  +L     I  E+      I+  + + +    A+ +   N NDP+ +Q +P  +E
Sbjct: 13  SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I      DP+ + N++ + G++H+Y  R+LL     C V+CR+CFR+E     K  + 
Sbjct: 73  EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             KD   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+R+  +L++ L E      + +H NHP E        +  +   GII+L+QS LLK 
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVVHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD  +L  L    +  ++ PYY+H  D  +GT H+ +  ++   I+  L E  SG   
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++PG   K  +  H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327


>gi|315125467|ref|YP_004067470.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913]
 gi|315013980|gb|ADT67318.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913]
          Length = 308

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 90/295 (30%), Positives = 147/295 (49%), Gaps = 3/295 (1%)

Query: 30  EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89
           +  + + + +       I   + NDP+  Q +P+ +E        +DP+ + +++   G+
Sbjct: 14  KARSLFPVRVPLPFIKKIRHGDANDPLLLQVMPRHQEFLTKSGFNKDPLLEQDNNQ-PGL 72

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           +H+Y  R+L+     C V CR+CFRR     +    L+ +    AL+YIQ    I EVI 
Sbjct: 73  LHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LNKRSLIDALSYIQADKNINEVIL 130

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDPL+     +   L  L  I  ++ +R HSR+P+V P RI  +L + L ++   V  
Sbjct: 131 SGGDPLMAKDDAISWFLDELEQIPQIKRMRIHSRLPVVIPARITEQLCERLAKSPLKVIF 190

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
             H NH  E   +   A++ L  A ++LL+Q+V+LK +ND  +   NL     +  + PY
Sbjct: 191 VNHINHANEIDSDFKNAMNMLKQANVLLLNQAVILKDVNDTVDAQINLSEALFDTDVMPY 250

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
           YLH  D   G SHF +   +  KI+A L E + G   P  + ++ G   K  ID 
Sbjct: 251 YLHLLDKVEGASHFDIDEAQAIKIMAELLEALPGFLVPKLVREIGGQKSKTPIDL 305


>gi|258545639|ref|ZP_05705873.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826]
 gi|258519106|gb|EEV87965.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826]
          Length = 326

 Score =  352 bits (904), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 133/314 (42%), Positives = 199/314 (63%), Gaps = 5/314 (1%)

Query: 10  SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
           + ++L     +    +  +      Y  A++  ++  ++   P+DPIA QFIP   EL I
Sbjct: 2   TPEELARRANLTPATLHRL---LAEYQYAMSDEMSAAMH-DAPDDPIAAQFIPDARELTI 57

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
              E  DPIGD  HSPL  +VHRYP+R+L K+  +C VYCRFCFR+E +G  +G  L   
Sbjct: 58  AASELADPIGDAPHSPLPSLVHRYPNRVLWKISPICAVYCRFCFRKEHIGR-RGQALRQS 116

Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
           +  A  AY+    QI E+I +GGDPL LS+K+L++ L  +R + H++ LR HSR+P+V P
Sbjct: 117 EIAAVSAYLAANPQIEEIILSGGDPLTLSNKKLRQNLAIIRDLPHIRRLRIHSRIPVVQP 176

Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
            RI+  L+  L E  +  ++ +H NH  E +  A AA+ RL  +G++L SQ+VLLKG+N 
Sbjct: 177 ARIDHALLDLLGEQPQSTHLVVHTNHSAELTPNARAALHRLRTSGVMLYSQTVLLKGVNA 236

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
           D   LANLM   ++  +KPYYLHH DLA GT H+R+++ EG+ IVA+L+ ++SG+  P Y
Sbjct: 237 DAATLANLMNDLLDCGVKPYYLHHLDLARGTGHYRVSLNEGRAIVAALRRRLSGIAMPTY 296

Query: 310 ILDLPGGYGKVKID 323
           I+++PGG GK+ + 
Sbjct: 297 IVEIPGGDGKIPVG 310


>gi|297620566|ref|YP_003708703.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044]
 gi|297375867|gb|ADI37697.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044]
          Length = 327

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 104/322 (32%), Positives = 169/322 (52%), Gaps = 6/322 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q++ +  T+ + L +   + +    EI + +  + + L   +A  I   N NDPI RQF+
Sbjct: 12  QIQRQNFTNWEKLADFLELDEFHRQEIMK-NPRFVLNLPIRLAKKIEKGNLNDPILRQFL 70

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E+        DP+GD+       ++H+Y  R+LL     C ++CR+CFR+      
Sbjct: 71  PMVAEMVETAGFVSDPVGDHACRKASKLLHKYNGRVLLVSTSACAMHCRYCFRQNFDYEV 130

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           +         +  L  I +   I EVI +GGDPL LS++ L  +L+ +  I H+  LRFH
Sbjct: 131 EDKTF-----DEELEVISKDETIKEVILSGGDPLSLSNRHLGALLEKISAIPHINRLRFH 185

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR PI  P+RI+ E ++ +      V+  IH NHP E  ++    ++ L   G+ +L+Q+
Sbjct: 186 SRFPIGIPERIDDEFLEAVDRLPHQVWFVIHCNHPRELDKDIFDRLNTLRKLGVNILNQA 245

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+NDD + LA L  T  +  I PYYLH  D   G SHF ++ EEG +++  L  ++
Sbjct: 246 VLLRGVNDDADTLAELCETLSDHGIFPYYLHQLDRVQGASHFEVSKEEGLQLIDQLTRRL 305

Query: 302 SGLCQPFYILDLPGGYGKVKID 323
            G   P Y+ ++ G   K  ++
Sbjct: 306 PGYAVPKYVQEIAGEPSKTPLN 327


>gi|224370018|ref|YP_002604182.1| YodO [Desulfobacterium autotrophicum HRM2]
 gi|223692735|gb|ACN16018.1| YodO [Desulfobacterium autotrophicum HRM2]
          Length = 359

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 102/348 (29%), Positives = 175/348 (50%), Gaps = 13/348 (3%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           + + + L        E++  I  +        TP  A L++P +P  P+ RQ IP  +EL
Sbjct: 12  INTPEKLRRIINPTPEELKAINTLDT--RWGTTPYFAALMDPDDPCCPVRRQIIPSLKEL 69

Query: 68  NILPEEREDPIGDNNHSPLK----GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
                 +   +   N +        I  +Y DR+   +   C  YCR CFRRE+V  Q+ 
Sbjct: 70  ENTYGIKNYLMFHENRTVDPERPDCIARQYQDRVAFTVTDTCASYCRHCFRREVVVDQRL 129

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
            +    D +  + +I++  +I +V+ TGGDP +LS + L  ++  LR I HV+++RF +R
Sbjct: 130 KL--RFDLDQGIKWIKKNKEIKDVLVTGGDPFLLSDQLLGDLITQLRQIDHVRMIRFGTR 187

Query: 184 VPIVDPQRINPELIQCLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
             I  PQRI  +L++ L +    P++I    NHP E +++   A+  L   G+ + +Q+V
Sbjct: 188 TIINLPQRITQDLMEILGDFHRVPIWINTQCNHPKEITDKTARAVFDLLRCGVNVGNQAV 247

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKI 301
           LLKGINDD +    L +  V  RI+PYYL + + A G  HFR  +E+G +++   L+   
Sbjct: 248 LLKGINDDVDTFRELHQKLVYTRIRPYYLFYCEAAPGIDHFRTGVEKGSQLIRDGLQGHT 307

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH-NIKKVGNGSYCITDHHNIVHDYP 348
           +GL +P Y+  +    GK+ +  +  + +     Y + ++       P
Sbjct: 308 TGLARPTYV--IATNIGKIPLMGNDYMIEKTEKEYRLRNYLGEETILP 353


>gi|187931527|ref|YP_001891511.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147]
 gi|187712436|gb|ACD30733.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147]
          Length = 328

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + +S  +L     I  E+      I+  + + +    A+ +   N NDP+ +Q +P  +E
Sbjct: 13  SFSSPLELLEFLEIDNEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I      DP+ + N++ + G++H+Y  R+LL     C V+CR+CFR+E     K  + 
Sbjct: 73  EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             KD   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+R+  +L++ L E      + IH NHP E        +  +   GII+L+QS LLK 
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD  +L  L    +  ++ PYY+H  D  +GT H+ +  ++   I+  L E  SG   
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++PG   K  +  H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327


>gi|57340042|gb|AAW50008.1| hypothetical protein FTT0750 [synthetic construct]
          Length = 363

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 101/322 (31%), Positives = 165/322 (51%), Gaps = 4/322 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + +S  +L     I  E+      I+  + + +    A+ +   N NDP+ +Q +P  +E
Sbjct: 39  SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 98

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I      DP+ + N++ + G++H+Y  R+LL     C V+CR+CFR+E     K  + 
Sbjct: 99  EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 156

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             KD   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+
Sbjct: 157 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 216

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+RI  +L++ L E      + IH NHP E        +  +   GII+L+QS LLK 
Sbjct: 217 VLPERITTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 276

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD  +L  L    +  ++ PYY+H  D  +GT H+ +  ++   I+  L E  SG   
Sbjct: 277 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 334

Query: 307 PFYILDLPGGYGKVKIDTHNIK 328
           P    ++PG   K  +  H+  
Sbjct: 335 PVLTKEIPGYPSKKWLSFHSYP 356


>gi|284162142|ref|YP_003400765.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus
           DSM 5631]
 gi|284012139|gb|ADB58092.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus
           DSM 5631]
          Length = 368

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 106/321 (33%), Positives = 184/321 (57%), Gaps = 8/321 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + + +  +L     I ++  ++++++   + + +T    +LI+ ++ NDPI R  IP  +
Sbjct: 9   RNVRTVDELKEYVNIPQDVEEKLRKVVEIHPMNVTRYYLSLIDWNDSNDPIKRMAIPSPD 68

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL+ L  +  D  G++ ++ ++G+ H+Y +  L+   + C VYCR+CFR+ MVG  +  V
Sbjct: 69  ELSCLEGD-YDTSGEHENTKMRGLQHKYSETALVLATNRCAVYCRYCFRKRMVGLTRDEV 127

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           +  +  + A+ YI+E  ++  V+ +GGDP +L +K +++ L  L  I H+  +RF SRVP
Sbjct: 128 I--RRLDRAVKYIEEHEEVTNVLISGGDPFVLDNKIIKRFLNKLVEIPHLDFIRFGSRVP 185

Query: 186 IVDPQRI-NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           +  P R+ + +L + L E    K +Y+  H NHP EF+EE+  AI RL + GI++ +Q+V
Sbjct: 186 VTFPMRLNDDDLPEILGEFAELKRIYVVTHYNHPKEFTEESTGAIKRLLDNGIVVSNQAV 245

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKIVASLKEKI 301
           LLKG+NDDP  LA L R  V   I PYY+            F++ ++EG KIV   K  +
Sbjct: 246 LLKGVNDDPYTLAELHRLLVRYGIVPYYVFQCRPVKRVKGIFQVPLKEGYKIVERAKAML 305

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
            G  + F  + +    GK++I
Sbjct: 306 DGHSKRFRYI-MSHRTGKIEI 325


>gi|118497318|ref|YP_898368.1| hypothetical protein FTN_0722 [Francisella tularensis subsp.
           novicida U112]
 gi|195536004|ref|ZP_03079011.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis
           subsp. novicida FTE]
 gi|118423224|gb|ABK89614.1| aminomutase [Francisella novicida U112]
 gi|194372481|gb|EDX27192.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis
           subsp. novicida FTE]
          Length = 328

 Score =  352 bits (903), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 99/319 (31%), Positives = 162/319 (50%), Gaps = 4/319 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + +S  +L     I  E+       +  + + +    A+ +   N NDP+ +Q +P  +E
Sbjct: 13  SFSSPLELLEFLEIDSEEAKVSLNTAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I      DP+ + N++ + G++H+Y  R+LL     C V+CR+CFR+E     K  + 
Sbjct: 73  EVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             KD   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++ LR H+R+PI
Sbjct: 131 GRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRIAHIKRLRIHTRIPI 190

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+R+  +L++ L E      + IH NHP E        +  +   GII L+QS LLK 
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIITLNQSTLLKY 250

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD  +L  L    +  ++ PYY+H  D  +GT H+ +  +  + I+  L E  SG   
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMV 308

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++PG   K  +  H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327


>gi|95928491|ref|ZP_01311238.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
 gi|95135281|gb|EAT16933.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM
           684]
          Length = 393

 Score =  351 bits (902), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 101/331 (30%), Positives = 172/331 (51%), Gaps = 13/331 (3%)

Query: 1   MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q  L +  +TS  +L     +  ++  +++ ++  + + +     +LI+P++ +DPI +
Sbjct: 21  WQKELSN-NITSVDELKAYLPLSYDEEADLRTVTEAHPMNIPRYYLSLIDPNDAHDPIRK 79

Query: 59  QFIPQKEELNI---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
             +P  EEL +   + E  +DP GD+ H    GI+H+Y    L+     C +YCR CFR+
Sbjct: 80  LAVPAAEELVVAGAMGETTKDPYGDDKHDKGNGILHKYSYTALVVATEYCSMYCRHCFRK 139

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
            MVG      +  ++   A  YI    +I  V+ +GGDPL+L    ++K+L  L  I H+
Sbjct: 140 RMVGLPNHQTV--ENFHNAAKYIAAHPEITNVVISGGDPLLLPTHVIRKMLAALEDIPHL 197

Query: 176 QILRFHSRVPIVDPQRI-NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLAN 232
             +R  SR P+V P R  + ELI  L++ G  K + +  H NHP E + EA  AI R+  
Sbjct: 198 NFVRIGSRAPVVYPIRFADDELIDVLRDFGRKKTLQMPTHFNHPVELTSEAAEAIRRVRE 257

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQ 291
           AG+ + +Q+V L G+NDD E L  LM   + + + PYYL+          HF++ ++ G 
Sbjct: 258 AGVTVNNQAVFLSGVNDDVETLTELMNGLLRIGVNPYYLYQCMPVARVRHHFQVPLKRGV 317

Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            IV   + ++ G  +  +   +    GK++I
Sbjct: 318 DIVDEARRRMDGYAK-RFKFIIGHDIGKLEI 347


>gi|89256661|ref|YP_514023.1| hypothetical protein FTL_1362 [Francisella tularensis subsp.
           holarctica LVS]
 gi|115315075|ref|YP_763798.1| hypothetical protein FTH_1327 [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156502809|ref|YP_001428874.1| hypothetical protein FTA_1443 [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|167010527|ref|ZP_02275458.1| radical SAM domain protein [Francisella tularensis subsp.
           holarctica FSC200]
 gi|290953399|ref|ZP_06558020.1| hypothetical protein FtulhU_03333 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313360|ref|ZP_06803969.1| hypothetical protein FtulhU_03323 [Francisella tularensis subsp.
           holarctica URFT1]
 gi|89144492|emb|CAJ79801.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica LVS]
 gi|115129974|gb|ABI83161.1| conserved hypothetical protein [Francisella tularensis subsp.
           holarctica OSU18]
 gi|156253412|gb|ABU61918.1| lysine 2,3-aminomutase, YodO family protein [Francisella tularensis
           subsp. holarctica FTNF002-00]
          Length = 328

 Score =  351 bits (902), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 165/319 (51%), Gaps = 4/319 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + +S  +L     I  E+      I+  + + +    A+ +   N NDP+ +Q +P  +E
Sbjct: 13  SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I      DP+ + N++ + G++H+Y  R+LL    +C V+CR+CFR+E     K  + 
Sbjct: 73  EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFRKEF--DYKENIP 130

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             KD   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+R+  +L++ L E      + IH NHP E        +  +   GII+L+QS LLK 
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD  +L  L    +  ++ PYY+H  D  +GT H+ +  ++   I+  L E  SG   
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++PG   K  +  H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327


>gi|307352679|ref|YP_003893730.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
           petrolearius DSM 11571]
 gi|307155912|gb|ADN35292.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
           petrolearius DSM 11571]
          Length = 368

 Score =  351 bits (902), Expect = 9e-95,   Method: Composition-based stats.
 Identities = 95/315 (30%), Positives = 162/315 (51%), Gaps = 9/315 (2%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
           D+     + +E+  ++ E+   ++        +LI+ ++P DPI +  IP   EL     
Sbjct: 9   DITKVPGLSEEEKKKLAEVQEMFAFRSNEYYLSLIDWNDPADPIRKLVIPDPAELEE--W 66

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
            R D  G+  +    G+ H+Y    L+ +  +C  +CR+CFR+ +  +     ++  D +
Sbjct: 67  GRLDASGEARYIVAPGMEHKYDQTALVLVSDMCAGFCRYCFRKRIFMNGGAREVAR-DID 125

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
             L YI    +I  V+ +GGDPL LS  RL+K++  +R I HVQI+R  ++VP  +P RI
Sbjct: 126 VDLEYISSHPEITNVLLSGGDPLFLSTNRLEKIIAWIREIDHVQIVRIGTKVPAYNPYRI 185

Query: 193 --NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
             + +L + ++      K +YI    NHP E +E+AI A++ L  +G +  +Q+ LL GI
Sbjct: 186 LNDTKLPEIIRRYSTEEKKIYIVTQFNHPRELTEQAIKAVNILQESGAVFANQTPLLHGI 245

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND+PE +A L R    + I PYY+       G   F + +E+G  I+   K   SGL + 
Sbjct: 246 NDNPETMAELSRKLSFIGITPYYVFQCRPTLGNRDFVVPVEDGYFILEQAKMNCSGLAK- 304

Query: 308 FYILDLPGGYGKVKI 322
            +   +    GK+ +
Sbjct: 305 RFTFAMSHVCGKIAV 319


>gi|33152475|ref|NP_873828.1| hypothetical protein HD1410 [Haemophilus ducreyi 35000HP]
 gi|33148698|gb|AAP96217.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
          Length = 330

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 88/317 (27%), Positives = 149/317 (47%), Gaps = 3/317 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
                 +L +   +         +    + + +    A  +   +  DP+  Q +  ++E
Sbjct: 17  AFKDPVELLHFLELDPGLFQADIQARRLFPLRVPRPFAVKMRKGDRYDPLFLQAMSLQDE 76

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
                   +DP+ +  +SP   I+H+Y +R+L  + + C + CR+CFRR    ++  +  
Sbjct: 77  FVQARGFSKDPLKEQ-YSPAPNILHKYQNRLLFMIKNSCAINCRYCFRRHFPYAEVKS-- 133

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                +  LAYI +  ++ EVIF+GGDP++     L  +L  +  I H++ LR H+R+P+
Sbjct: 134 GPLAWQQGLAYIADYKELEEVIFSGGDPMMAKDNELAWLLTQIEQIPHIKTLRIHTRLPV 193

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RIN +L   L ++   + +  H NH  E  +   + IS L  A + +L+Q+VLLKG
Sbjct: 194 VIPNRINRQLCDRLSKSPLNIVVVTHINHANELDDILASKISLLKQANVTVLNQAVLLKG 253

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND+ + L  L        I PYYLH  D   G SHF +  ++   I   L+   SG   
Sbjct: 254 INDNAKTLKALNDKLFAAGILPYYLHLLDKVEGASHFFIDDQQALVIYKELQRISSGYLV 313

Query: 307 PFYILDLPGGYGKVKID 323
           P    ++     K  I 
Sbjct: 314 PKLAREIAQQPNKTLIS 330


>gi|148652299|ref|YP_001279392.1| lysine 2,3-aminomutase YodO family protein [Psychrobacter sp.
           PRwf-1]
 gi|148571383|gb|ABQ93442.1| L-lysine 2,3-aminomutase [Psychrobacter sp. PRwf-1]
          Length = 372

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 87/327 (26%), Positives = 157/327 (48%), Gaps = 5/327 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +    +T    L     +    I +   +   + + +       +   + NDP+  Q
Sbjct: 43  WQTQVADVITDIDQLLAILELS--HIKDELYVPQGFGLRVPKAFVAKMKKGDANDPLLLQ 100

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P K+E   +     DP+ +N H+P+KG++H+Y  R+L+ +   C ++CR+CFR+    
Sbjct: 101 VLPNKQEQTQVTGYVSDPLAENAHNPIKGLLHKYRSRVLVTVTGACAIHCRYCFRQHF-- 158

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +  +  S        YI++  +I EVI +GGDPL ++++RL   L+ L  +  +  +R
Sbjct: 159 DYQANLPKSDQLRLIQDYIRQHPEINEVILSGGDPLSVTNRRLFLWLQALEDLPQINTIR 218

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+ IV P R++ EL+  L+ +   + + +H NH  E        +      GI LL+
Sbjct: 219 LHTRLSIVIPDRLDNELLDRLEHSRCRIVMVVHTNHANEIDNHTAKLLQHARQKGITLLN 278

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL G+ND  +    L     E  + PYYLH  D  AG +HF +  ++   +   +  
Sbjct: 279 QTVLLAGVNDGLKQQVALSERLFEAGVLPYYLHLLDKVAGAAHFDIAQKQAIDLYWQMLA 338

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326
            + G   P  + +LP    K  +D ++
Sbjct: 339 HLPGYLVPKLVQELPHKPFKTPVDLYH 365


>gi|256823217|ref|YP_003147180.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM
           16069]
 gi|256796756|gb|ACV27412.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM
           16069]
          Length = 349

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 97/330 (29%), Positives = 154/330 (46%), Gaps = 9/330 (2%)

Query: 1   MQLR------HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND 54
            Q R       + ++S  +L +   +  + +       + +   +       +   NPND
Sbjct: 15  WQEREWKKLLSQAISSPFELLSRLNLTTDDLPYTVLAEHQFMQKVPAPFVECMEKGNPND 74

Query: 55  PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           P+ RQ +   +E   +     DP+ + N S + G++H+Y  R+L+ L   C + CR+CFR
Sbjct: 75  PLLRQVLAVSDENQEVAGFVPDPLQEQN-SEVPGLLHKYRSRVLVMLSTACAINCRYCFR 133

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
           RE    +          +    Y+    +I EVI +GGDPL ++   L+  ++ L  I  
Sbjct: 134 REFPYQEHQA--GRNGWQPIFDYLTAHPEINEVILSGGDPLAVNDSYLKDFIQQLERIPS 191

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           +  LR H+R+P+V PQR+   LI  L +      + +H NHP E  E    A+ RL   G
Sbjct: 192 IIRLRIHTRLPLVIPQRVTQGLIDALLQTRLQTVVVLHINHPNEMGELFAQAVRRLHQNG 251

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
           I LL+QSVLL G+N++   LA L        I PYYLH  D   G  HF +   +  KI+
Sbjct: 252 IHLLNQSVLLDGVNNNSSTLAELSEKLFAHHILPYYLHQLDKVRGAHHFAVEEAQAIKIM 311

Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
             L  +++G   P  + +  G   K  ID 
Sbjct: 312 QELNTRLAGFLVPKLVREEAGKTSKTPIDL 341


>gi|188576188|ref|YP_001913117.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A]
 gi|188520640|gb|ACD58585.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A]
          Length = 313

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 92/315 (29%), Positives = 150/315 (47%), Gaps = 2/315 (0%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +   + L     +  +        +  + + +       +   + +DP+ RQ +P   E+
Sbjct: 1   MRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVLPLDAEM 60

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
             +P    D +GD       G++ +Y  R LL     C V+CR+CFRR    +++    +
Sbjct: 61  QPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEE--TAA 118

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
                 A+A I     I EV+ +GGDPL L+  +L ++   L  I H++ LR HSR+PIV
Sbjct: 119 RDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIV 178

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
            P+R++  L+  L+    P    +HANH  EF      A+  L + G  LL+Q+VLL G+
Sbjct: 179 LPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRDTGAQLLNQAVLLGGV 238

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           ND  + LA L        + PYYLH  D  AG +HF +     + +   L  ++SG   P
Sbjct: 239 NDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHTELATRLSGYLVP 298

Query: 308 FYILDLPGGYGKVKI 322
             + ++PG  GK  +
Sbjct: 299 RLVREIPGDTGKRPL 313


>gi|71898719|ref|ZP_00680888.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
 gi|71731484|gb|EAO33546.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1]
          Length = 342

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 98/321 (30%), Positives = 159/321 (49%), Gaps = 2/321 (0%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           Q+  + +   ++L     +    +   +  +  + + +       +   + +DP+ RQ +
Sbjct: 24  QVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVARMRVGDLHDPLLRQVL 83

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E + +     D +GD       GI+ +Y  RILL     C V+CR+CFRR    ++
Sbjct: 84  PIDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 143

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                S        A+++    I EVI +GGDPL LS  +L ++   LR   H++ LR H
Sbjct: 144 D--TASHDRWRETAAFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGTPHLKRLRIH 201

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           SR+P+V P+RI+  L++ L     PV   IHANH  EF     AA++ L   G  LL+Q+
Sbjct: 202 SRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 261

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL+G+ND+   LA L        + PYYLH  D  AGT+H+ +     + + A L  ++
Sbjct: 262 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVARL 321

Query: 302 SGLCQPFYILDLPGGYGKVKI 322
           SG   P ++ ++PG   K  +
Sbjct: 322 SGYLVPRFVREVPGDSSKRPL 342


>gi|254374142|ref|ZP_04989624.1| conserved hypothetical protein [Francisella novicida GA99-3548]
 gi|151571862|gb|EDN37516.1| conserved hypothetical protein [Francisella novicida GA99-3548]
          Length = 328

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + +S  +L     I  E+      I+  + + +    A+ +   N NDP+ +Q +P  +E
Sbjct: 13  SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I      DP+ + N++ + G++H+Y  R+LL     C V+CR+CFR+E     K  + 
Sbjct: 73  EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             KD   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQQIPHIKRLRIHSRIPV 190

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+R+  +L++ L E      + IH NHP E        +  +   GII+L+QS LLK 
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKD 250

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD  +L  L    +  ++ PYY+H  D  +GT H+ +  ++   I+  L E  SG   
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++PG   K  +  H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327


>gi|320591241|gb|EFX03680.1| L-lysine-aminomutase [Grosmannia clavigera kw1407]
          Length = 487

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 104/351 (29%), Positives = 174/351 (49%), Gaps = 25/351 (7%)

Query: 22  KEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNI-LPEEREDPIG 79
           + + D + ++ +    A  P + + IN  +P NDPI RQF+P K  +    P+   D + 
Sbjct: 120 QTREDLVADVMDGIKAATMPYVLSRINWKDPRNDPIFRQFLPVKSRMIPDHPKLTLDSLH 179

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEA 133
           ++  SP+ G+V+RYP++ L     VCP YC FC R   VG    +V       + +  E 
Sbjct: 180 ESADSPVSGLVYRYPEKALFLPTSVCPTYCMFCTRSYAVGGNTESVKKASMKPTKRRWEE 239

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
             AYI+ +  + +++ +GGD   L+  +L  V + L  + +++  RF S+   V P RI 
Sbjct: 240 VFAYIESQPALQDIVVSGGDAYYLTPDQLAYVGERLIAMPNIRRFRFASKGVAVAPARIL 299

Query: 194 PE---LIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
                    L       ++AGK + +  H NHP E S     A  +L+ AGI++ +Q+VL
Sbjct: 300 DAEDSWFDALSYVATQARKAGKAMALHTHFNHPNEISWVTEQAARKLSEAGIMVRNQTVL 359

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           L+G+NDD   ++ L+R   +  I PYY++  D+     H R  ++    I A ++  I+G
Sbjct: 360 LRGVNDDVATMSTLIRKLADNIIFPYYVYQCDMVEKVEHLRTPLQTILDIEAQIRGSIAG 419

Query: 304 LCQPFYILDLPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347
              P +++DLPGG GK    +H    +  G   +        D  N V++Y
Sbjct: 420 FMMPQFVVDLPGGGGKRLACSHLDYDRNTGVSRFMAPAVTGRDKDNKVYEY 470


>gi|304311512|ref|YP_003811110.1| hypothetical protein HDN1F_18820 [gamma proteobacterium HdN1]
 gi|301797245|emb|CBL45465.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 336

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 89/329 (27%), Positives = 168/329 (51%), Gaps = 6/329 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  + ++S  +L+    + +  ++     +  + + +     + I     +DP+ RQ
Sbjct: 7   WQQQLSQLVSSVDELWRLLDLPQSLLESASAAARAFPLRVPQAFVDKIQKGKLDDPLLRQ 66

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +PQ  EL   P+   DP+ + + +P +G++H+Y  R+L+     C + CR+CFRR    
Sbjct: 67  ILPQGLELTPPPDFVTDPLAELHANPHRGLLHKYQSRVLIIAGSACAINCRYCFRRHFPY 126

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +   LS    +  + +++   ++ EVIF+GGDPLI S+ RLQ+ +  L  +  ++ +R
Sbjct: 127 --EDNQLSQAQFDELIQHLETHPEVNEVIFSGGDPLINSNARLQRWVDALLLLPQLKRIR 184

Query: 180 FHSRVPIVDPQRINPELIQCLK---EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           FH+R P+V P RI+  L+   +   ++G+   + +H+NHP E       A+ +L +A + 
Sbjct: 185 FHTRTPVVVPARIDEGLLALFRSIAQSGRNAILVVHSNHPSELDHHFDTAMRKLRDAQVT 244

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           L +Q+VLL+G+ND  +  A L     +  + PYYLH  D  AG   F +   E  ++   
Sbjct: 245 LFNQAVLLRGVNDHVDAQAALSERLFDAGVLPYYLHLLDPVAGAHDFSIHDTEAFELYRQ 304

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           +  ++ G   P    ++PG   K  +  +
Sbjct: 305 MAARLPGFLLPRLAREVPGAPAKQILAPN 333


>gi|21672314|ref|NP_660381.1| hypothetical protein BUsg020 [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
 gi|22654299|sp|Q44634|Y020_BUCAP RecName: Full=Uncharacterized KamA family protein BUsg_020
 gi|21622913|gb|AAM67592.1| hypothetical 38.7 kDa protein [Buchnera aphidicola str. Sg
           (Schizaphis graminum)]
          Length = 337

 Score =  350 bits (898), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 98/287 (34%), Positives = 153/287 (53%), Gaps = 2/287 (0%)

Query: 33  NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
             +   +    A+ +  ++P DP+  Q I + +E     +  EDP+ +     L G++H+
Sbjct: 49  KVFPFRVPYSFASRMKKNDPKDPLLLQVITKNQEFLNNLQFNEDPVKEKKDIVLPGLLHK 108

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y DR+L  L   C + CR+CFR+     +     + K+    L YI +  ++ EVI +GG
Sbjct: 109 YKDRVLWILKTNCAINCRYCFRKHFPYEKNKG--NKKNWIQILHYISQNIELNEVILSGG 166

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           DPL+     L  ++ +L  IKH++ LR H+R+PIV P RI  +L Q    +   + I  H
Sbjct: 167 DPLMAKDHELLWLITSLSKIKHIKRLRIHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTH 226

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
            NHP E +E+   ++ +L  + +ILL+QSVLLK IND+  ILA L     E  I PYYLH
Sbjct: 227 INHPQEINEQLSDSLLKLKKSNVILLNQSVLLKNINDNAIILAELSSRLCENNIIPYYLH 286

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             D   GTSHF ++ ++ + I++ L + ISG   P  + D      K
Sbjct: 287 ILDKVKGTSHFLVSNKKAKSIISDLMKMISGFLVPRLVFDNGSKDNK 333


>gi|262278291|ref|ZP_06056076.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202]
 gi|262258642|gb|EEY77375.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202]
          Length = 338

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 100/292 (34%), Positives = 152/292 (52%), Gaps = 2/292 (0%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
            S  + + +       +N  NP DP+  Q +P   EL   PE   DP+G+   + L G++
Sbjct: 43  ASEQFKLRVPRAFVGKMNVKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R LL L   C V+CR+CFRR     +   +  + D      YI+    I E+I +
Sbjct: 103 HKYQSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNDDWPNIKNYIEANPHINEIILS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL LS++++   L+ L  +K ++ILR HSRVPIV P RI+ ELI  LK +   + + 
Sbjct: 161 GGDPLTLSNRKIALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H+NH  E  +   + + +L+   I +L+Q+VLLKG+ND  + L +L     E R+ PYY
Sbjct: 221 VHSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           LH  D   G  HF L   E   I   +   + G   P  + ++ G   K  +
Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332


>gi|160938417|ref|ZP_02085772.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438790|gb|EDP16547.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC
           BAA-613]
          Length = 419

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 102/327 (31%), Positives = 172/327 (52%), Gaps = 14/327 (4%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFI 61
           LR+  +T AQ+L     +  ++ + +  I   + + +T    +LI+ +NP  DP+ R  I
Sbjct: 61  LRN-NVTRAQELKTYMRLTSQEEEHMTRILEQFPMTVTRYYLSLIDWNNPEQDPVFRMSI 119

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P   E ++  +   D  G+ +++ L G+ H+Y    L+   H C +YCR CFR+ +VG  
Sbjct: 120 PSIRETDLSGDF--DTSGEADNTVLPGLQHKYRQTALILSTHRCAMYCRHCFRKRLVGIS 177

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
            G      + +   AYI    +I  V+ +GGD  + S++ +++ L+    IKH+ ++RF 
Sbjct: 178 GGETAG--NVDQMAAYIVSHPEITNVLISGGDSFLNSNQIIRRYLEAFSSIKHLDLIRFG 235

Query: 182 SRVPIVDPQRI--NPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +R P+V P RI  +PEL+  L    K   +Y+    NH  E + +A+ AI  L +AGII+
Sbjct: 236 TRTPVVLPMRIYDDPELLDILARYTKIKQIYVVTQFNHSNELTPQAVKAIRCLMDAGIIV 295

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVAS 296
            +Q+VLLKGINDD   L  L++      + PYY+      +G  S F++ + EG +IV  
Sbjct: 296 KNQTVLLKGINDDAGSLGTLLKNLTRYGVIPYYIFQCRPVSGVKSQFQIPLTEGCRIVEE 355

Query: 297 LKEKISGLCQP-FYILDLPGGYGKVKI 322
            K   +G  +   Y   +    GK++I
Sbjct: 356 AKNMQNGQGKCIRYA--MSHVTGKIEI 380


>gi|124485170|ref|YP_001029786.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
 gi|124362711|gb|ABN06519.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z]
          Length = 368

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 99/325 (30%), Positives = 163/325 (50%), Gaps = 10/325 (3%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           ++ K +TS   L N   +  ++ + ++ +++ +         +LI+  +  DPI    +P
Sbjct: 1   MKPKYITSISALDNLVGLAPKEREMMERVTDVFPFRANDYYLSLIDWKDRRDPIRAIIVP 60

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              EL        DP  + +++   G+ H+Y    LL L  VC   CRFCFR+ +  S +
Sbjct: 61  DPRELES--GGSNDPSCEKDYTKKPGLQHKYDQTGLLLLTDVCGGICRFCFRKRLFMSCE 118

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
              +  +D    +AYI+E ++I  V+ TGGDPL L  + L+ VL+ LR I HV I+R  S
Sbjct: 119 RETV--RDVSENIAYIREHTEITNVLLTGGDPLTLDTRHLESVLRELREIPHVSIIRIGS 176

Query: 183 RVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           ++   +P RI  + EL+  L       K +Y+  H NHP E ++ +I A   L  A +I+
Sbjct: 177 KMLAYNPYRILNDAELLSVLSRYSTPEKRIYLMAHFNHPNEITDVSIQAAEALQKADVIV 236

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
           ++Q+ +L GIN + E L  L R      I PYY+     A G   F++ +EE   IV   
Sbjct: 237 VNQTPILNGINAESETLTTLFRKLSFAGIAPYYVFQCRPATGNGLFQVPVEESYDIVQGA 296

Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322
            +  SGL +    + +    GKV++
Sbjct: 297 WKNCSGLAKRARFI-MSHSTGKVEV 320


>gi|319786811|ref|YP_004146286.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465323|gb|ADV27055.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 338

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 96/323 (29%), Positives = 158/323 (48%), Gaps = 3/323 (0%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q L  + +   ++L     + +         +  +++ +       +   + +DP+ RQ
Sbjct: 18  WQRLWREAVRDPRELLALLGLDEAAARISGAAAGQFAMRVPRGFIARMRHGDLHDPLLRQ 77

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P  +E  I+P    D +GD       G++ +Y  R LL     C + CR+CFRR    
Sbjct: 78  VLPVVDEERIVPGFGLDAVGDGLAKKADGVIQKYHGRALLVATGSCAINCRYCFRRHFPY 137

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +++    +      A+A I     I EVI +GGDPL L+  +L ++   L  I H++ LR
Sbjct: 138 AEE--TAARDGWAGAVAAIAADPGIDEVILSGGDPLSLATSKLAELTAQLATIPHIRRLR 195

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            HSR+P+V P+RI+   ++ +     PV   IHANH  EF      A+ RL  AG  LL+
Sbjct: 196 IHSRLPVVLPERIDDAFVEWMSALPWPVAFVIHANHANEFDASVDQALGRLRQAGAQLLN 255

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL+G+ND  + LA+L        + PYYLH  D   G +HF +  E  +++   L  
Sbjct: 256 QAVLLRGVNDSVDALADLSERSYAAGVLPYYLHQLDRIQGAAHFEVGDERARELHRQLAA 315

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++SG   P  + ++ G  GK  +
Sbjct: 316 RLSGYLVPKLVREVQGDPGKRPL 338


>gi|254482976|ref|ZP_05096212.1| KamA family protein [marine gamma proteobacterium HTCC2148]
 gi|214036848|gb|EEB77519.1| KamA family protein [marine gamma proteobacterium HTCC2148]
          Length = 346

 Score =  349 bits (895), Expect = 5e-94,   Method: Composition-based stats.
 Identities = 96/325 (29%), Positives = 166/325 (51%), Gaps = 4/325 (1%)

Query: 1   MQLRHKTL-TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q   + +  S + L +   +  + +   +     + + +     + +   +P+DP+ RQ
Sbjct: 13  WQAELQAVVRSGRQLLSQLGLDAQAVGYSELAGEDFPLKVPQSFISRMTHGDPDDPLLRQ 72

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPL-KGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
            +    EL  +P   +DP+G+   S    G++ +Y  R LL L   C + CR+CFRR   
Sbjct: 73  VLSVSAELLQVPGFGDDPVGETGDSITHPGVIQKYHGRALLILSGGCAINCRYCFRRHFP 132

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            ++     S ++   A+ +I +   I EVI +GGDPL++S ++L+ ++  L  I H+Q L
Sbjct: 133 YNENRN--SREEWLHAVRHIADDPSISEVILSGGDPLLVSDRQLKSLVGQLAAIPHLQRL 190

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R HSR+PIV P R+   L+  L        + +H+NH  E + E   A+ +L++  I LL
Sbjct: 191 RVHSRLPIVLPSRVTAGLVNALTGTRLQSVLVVHSNHGNEINTEVKNALQKLSSGKITLL 250

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLL GIND  + LA+L        + PYYLH  D   G +HF +T   G +++  L+
Sbjct: 251 NQAVLLAGINDTEDELADLSEQLFTAGVLPYYLHLLDRVRGAAHFEVTARRGLELITQLE 310

Query: 299 EKISGLCQPFYILDLPGGYGKVKID 323
            ++ G   P  + +  G   KV++ 
Sbjct: 311 NRLPGYLVPRLVREDAGELAKVRVT 335


>gi|27904534|ref|NP_777660.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
 gi|46397205|sp|Q89B32|Y022_BUCBP RecName: Full=Uncharacterized KamA family protein bbp_022
 gi|27903931|gb|AAO26765.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia
           pistaciae)]
          Length = 340

 Score =  349 bits (895), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 101/320 (31%), Positives = 169/320 (52%), Gaps = 3/320 (0%)

Query: 7   TLTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
            +T+  +L     +    +  +  ++   +S+ +     + +  ++P DP+  Q +P  +
Sbjct: 21  AITNPDELLRTLNLKSNTKYFKNIQVQKLFSLRVPKTFVSRMKKNDPFDPLLLQILPHTK 80

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           EL       +DP+ +  +  + G++ +Y +RILL L   C + CR+CFRR    SQ    
Sbjct: 81  ELKNNHNFVQDPLEETKNVIIPGLIRKYNNRILLLLKTNCAINCRYCFRRYFPYSQHPG- 139

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            + ++   A+ YI+ ++ + EVI +GGDPL+     +Q ++ TL  I H++ LR H+R+P
Sbjct: 140 -NKENLNLAIQYIKNQTDLNEVILSGGDPLMAKDHEIQWIVNTLSNIYHIKRLRIHTRLP 198

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           IV P RI   L + L      + I  H NH  E + E    I++L   GI LL+QSVLL+
Sbjct: 199 IVIPSRITNNLCKILSTTRLKILIVTHINHAQEINHELQYNINKLHKLGITLLNQSVLLR 258

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
           GIND+ +IL+ L     ++ I PYYLH  D    T+HF ++ ++   IV  L   ISG  
Sbjct: 259 GINDNAKILSQLSNKLFDINILPYYLHILDKVKSTTHFYVSEKQASIIVVELLSMISGFL 318

Query: 306 QPFYILDLPGGYGKVKIDTH 325
            P  + + PG   K+ I+ +
Sbjct: 319 VPKLVCEHPGKNSKIYINLN 338


>gi|307719756|ref|YP_003875288.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192]
 gi|306533481|gb|ADN03015.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192]
          Length = 324

 Score =  348 bits (894), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 117/314 (37%), Positives = 173/314 (55%), Gaps = 5/314 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
               +TP    L    + +  +ARQ  P   E   LP E  DP+ D  HSPL  +VHRYP
Sbjct: 3   LPFLVTPYYRRL---ADAHPALARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYP 59

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           DR L+ +   C  YCRFCFRR    S   ++   ++ +A LAY++E  ++ EV+ +GGDP
Sbjct: 60  DRALILVTDRCAAYCRFCFRRHFTASGASSLTPGQE-QAILAYLREHPEVEEVLLSGGDP 118

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L+L   RL  +L  LR ++   ++R  +R+P+V P RI   L +    A +P+++  H N
Sbjct: 119 LMLPDTRLAALLSGLRALRPGLVIRLGTRIPVVLPARITARLARI-LAAARPLWVVTHFN 177

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           HP E + EA AA+  L   G+ +++Q+VLL+G+ND  E LA L R  +   +KPYYL   
Sbjct: 178 HPAELTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQG 237

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
           DLAAGTSHFR  +     +   L   +SGL  P   +DLP G GKV++   ++ +     
Sbjct: 238 DLAAGTSHFRTPLSRTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETW 297

Query: 335 YCITDHHNIVHDYP 348
           Y +      ++ YP
Sbjct: 298 YYLQGPDGGLYRYP 311


>gi|241668391|ref|ZP_04755969.1| lysine 2,3-aminomutase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876924|ref|ZP_05249634.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842945|gb|EET21359.1| conserved hypothetical protein [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 328

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 100/316 (31%), Positives = 163/316 (51%), Gaps = 4/316 (1%)

Query: 10  SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
           S  +L     I  E+      I+  + + +    AN +   N NDP+ +Q +P  +E  I
Sbjct: 16  SPLELLEFLEIDSEEAKVSLNITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVI 75

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
                 DP+ + N++ + G++H+Y  R+LL     C ++CR+CFR+E     K  +   K
Sbjct: 76  DQAYSSDPLDEKNYNKVPGLLHKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRK 133

Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
           D   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+V P
Sbjct: 134 DWLKAFEYIANDQTIEEVILSGGDPLLNNDEVLEFFIENIQQISHIKRLRIHSRIPVVLP 193

Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
           +R+  +L++ L E      + IH NHP E  +     +  +   GII+L+QS LLK IND
Sbjct: 194 ERMTNKLLKILSEHRLDTVLVIHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDIND 253

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
           D  +L  L    +  ++ PYY+H  D  +GT H+ +  +  + I+  L E  SG   P  
Sbjct: 254 DANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DCAKDIMKKLSEISSGFMVPIL 311

Query: 310 ILDLPGGYGKVKIDTH 325
             ++PG   K  +  H
Sbjct: 312 TKEIPGYPSKKWLSFH 327


>gi|2754809|gb|AAC04238.1| 37.5 kDa protein [Buchnera aphidicola (Myzus persicae)]
          Length = 337

 Score =  348 bits (893), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 102/313 (32%), Positives = 164/313 (52%), Gaps = 2/313 (0%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           ++T  ++L     ++        + +  +   +     + +  ++P DP+  Q I    E
Sbjct: 23  SITEPKELLKILNLENHPQYYTSKFNTLFPFRVPHSFVSRMKKNDPQDPLLLQVIINNRE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               P+  +DPI +  H  L G++H+Y DR+LL +   C ++CR+CFR+     +     
Sbjct: 83  FLNSPKYVKDPIKEKKHIILPGLLHKYKDRVLLFVKTNCAIHCRYCFRKYFPYEKNQG-- 140

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           S  +   +L YIQ+   + EVIF+GGDPLI     L  ++ +L  I H++ LR H+R+PI
Sbjct: 141 SKINWIKSLEYIQKNKNLNEVIFSGGDPLIAKDHELLWLITSLSKINHIKRLRIHTRLPI 200

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P RI   L +   ++   + I  H NHP E ++    ++ +L  +G+I+L+QSVLLK 
Sbjct: 201 VIPNRITSNLCEIFIQSSLKIIIVTHINHPQEINKNLSNSLLKLKESGVIMLNQSVLLKN 260

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDDP ILA L     +  I PYYLH  D   GT HF ++ ++ + I+ SL + ISG   
Sbjct: 261 INDDPIILAELSNLLCDNNILPYYLHILDTVKGTMHFSVSSKKAKSIMKSLIKMISGYLI 320

Query: 307 PFYILDLPGGYGK 319
           P  + D      K
Sbjct: 321 PRLVQDTGSQNSK 333


>gi|328676803|gb|AEB27673.1| Lysine 2,3-aminomutase [Francisella cf. novicida Fx1]
          Length = 328

 Score =  347 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           + +S  +L     I  E+      I+  + + +    A+ +   N NDP+ +Q +P  +E
Sbjct: 13  SFSSPLELLEFLEIDSEEAKVSLNITKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             I      DP+ + N++ + G++H+Y  R+LL     C V+CR+CFR+E     K  + 
Sbjct: 73  EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQISCAVHCRYCFRKEF--DYKENIP 130

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             KD   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+
Sbjct: 131 GRKDWSKAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQQIVHIKRLRIHSRIPV 190

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P+R+  +L++ L E      + IH NHP E        +  +   GII+L+QS LLK 
Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKD 250

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           INDD  +L  L    +  ++ PYY+H  D  +GT H+ +  +  + I+  L E  SG   
Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMV 308

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    ++PG   K  +  H
Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327


>gi|326560914|gb|EGE11279.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 7169]
 gi|326563850|gb|EGE14101.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 46P47B1]
 gi|326566861|gb|EGE17000.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 103P14B1]
 gi|326571276|gb|EGE21298.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC1]
 gi|326571582|gb|EGE21597.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC7]
 gi|326576776|gb|EGE26683.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 101P30B1]
          Length = 356

 Score =  347 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 98/295 (33%), Positives = 160/295 (54%), Gaps = 2/295 (0%)

Query: 33  NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
             + + +       +   + +DP+ RQ +P   E   +     DP+ +NNH+P+KG++H+
Sbjct: 49  KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHK 108

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y  R+LL +   C V+CR+CFR+           S+ + +  + YI + +++ EVI +GG
Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           DPL L++KRL+  L  +  I H++ +R H+R+P+V P R++ ELI  ++   K + I +H
Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
            NHP E  ++ IA   +L +AG  LL+QSVLL  INDD + L+ L +      I PYYLH
Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
             D   G +HF + I +   +   L E + G   P  + + P    K  ID +  
Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPIDIYQY 341


>gi|326575138|gb|EGE25066.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis CO72]
 gi|326577548|gb|EGE27425.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis O35E]
          Length = 356

 Score =  347 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 97/295 (32%), Positives = 160/295 (54%), Gaps = 2/295 (0%)

Query: 33  NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
             + + +       +   + +DP+ RQ +P   E   +     DP+ +NNH+P+KG++H+
Sbjct: 49  KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHK 108

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y  R+LL +   C V+CR+CFR+           S+ + +  + YI + +++ EVI +GG
Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           DPL L++KRL+  L  +  I H++ +R H+R+P+V P R++ ELI  ++   K + I +H
Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
            NHP E  ++ IA   +L +AG  LL+QSVLL  INDD + L+ L +      I PYYLH
Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
             D   G +HF + I +   +   L E + G   P  + + P    K  +D +  
Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPLDIYQY 341


>gi|296112655|ref|YP_003626593.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4]
 gi|295920350|gb|ADG60701.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4]
          Length = 356

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 97/295 (32%), Positives = 160/295 (54%), Gaps = 2/295 (0%)

Query: 33  NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
             + + +       +   + +DP+ RQ +P   E   +     DP+ +NNH+P+KG++H+
Sbjct: 49  KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMAVDGYSTDPLDENNHNPIKGLLHK 108

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y  R+LL +   C V+CR+CFR+           S+ + +  + YI + +++ EVI +GG
Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           DPL L++KRL+  L  +  I H++ +R H+R+P+V P R++ ELI  ++   K + I +H
Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
            NHP E  ++ IA   +L +AG  LL+QSVLL  INDD + L+ L +      I PYYLH
Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
             D   G +HF + I +   +   L E + G   P  + + P    K  +D +  
Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPLDIYQY 341


>gi|146328795|ref|YP_001209500.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A]
 gi|146232265|gb|ABQ13243.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A]
          Length = 304

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 132/293 (45%), Positives = 197/293 (67%), Gaps = 5/293 (1%)

Query: 32  SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
           +  Y + ++  + +LIN       IARQF+P ++EL + PEE  DPIGD  HSP+  +VH
Sbjct: 2   TRDYPVRISKTMNDLINHSAA---IARQFLPSEDELTVAPEELRDPIGDEAHSPVDFLVH 58

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           RY +R+L K+  VC V+CRFCFRRE++G QKG+       + A  Y+++  +I EVI +G
Sbjct: 59  RYRNRVLWKVTQVCAVHCRFCFRRELIG-QKGSRPDEAAIQQAHDYMRQHHEIEEVILSG 117

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           GDP+ LS +RL+  +  L  I+H++ +R H+R+PIV P++I  E +  L++ GK +   +
Sbjct: 118 GDPMTLSAERLRLYVAPLLEIEHIRRIRVHTRMPIVAPEQIKEEWLTTLQKTGKQIVYVL 177

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
           H NH  EF+  + + ++RLA   + LLSQ+VLL+G+NDD  +LA LM  F+  RIKPYYL
Sbjct: 178 HVNHADEFNPASDSLLARLATDHL-LLSQTVLLRGVNDDAAVLAQLMEAFLARRIKPYYL 236

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
           HH DLA GT HFR+TI+EG+ I   L++ +SG+  P YI+++PGG GK+ + T
Sbjct: 237 HHLDLARGTGHFRVTIDEGRAIYQQLRQYVSGIALPTYIVEIPGGDGKIAVMT 289


>gi|121998759|ref|YP_001003546.1| lysine 2,3-aminomutase YodO family protein [Halorhodospira
           halophila SL1]
 gi|121590164|gb|ABM62744.1| L-lysine 2,3-aminomutase [Halorhodospira halophila SL1]
          Length = 342

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 6/319 (1%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
            +   ++L     + +  +   ++ +  + + +       I P +PNDP+ RQ +P   E
Sbjct: 28  AIRQPEELLRRLDLPESLLAPAEQAARTFPMRVPVPYLARIRPGDPNDPLLRQVLPIGAE 87

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           L   P    DP+ +       G++ +Y  R LL     C ++CR+CFRR    +++    
Sbjct: 88  LETHPGYTADPLAEQGARTGSGVLQKYNGRSLLIATGGCAIHCRYCFRRCFPYNREAG-- 145

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                  AL  +++     EVI +GGDPL+L  + L   L+ L  I  V+ +R H+R+P+
Sbjct: 146 ----WRTALDQLEQHGAPEEVILSGGDPLLLDDQALGACLERLGRIAAVRRVRIHTRLPV 201

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           V P R+   L + L +      I +HANHP E   E  +A++RL N    +L+Q+VLL+G
Sbjct: 202 VIPSRVTAALARHLGQIRLQSVIVVHANHPREIDAEVSSALARLRNVCSTVLNQTVLLRG 261

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDD   LA+L        + PYYLH  D  AG +HF +  + GQ++ A L   + G   
Sbjct: 262 VNDDTATLASLSERLFAADVLPYYLHLLDPVAGAAHFDVDAKTGQRLWAELARSLPGYLV 321

Query: 307 PFYILDLPGGYGKVKIDTH 325
           P    + PG   K  I   
Sbjct: 322 PRLAREEPGAAAKTVITPD 340


>gi|268323521|emb|CBH37109.1| conserved hypothetical protein [uncultured archaeon]
          Length = 366

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 102/322 (31%), Positives = 181/322 (56%), Gaps = 11/322 (3%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           ++++   L +   +  E   +++EI   + + +T    +LI+ ++PNDPI R  +P +EE
Sbjct: 10  SISTISQLGDYIELTPEMEQQLQEIVAIHPMRITQYYMSLIDKNDPNDPIRRMTVPSEEE 69

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           LN+L     D  G+  ++ + G+ H+Y    L+   + C  YCR+CFR+ +VG     +L
Sbjct: 70  LNLLGSY--DTSGERENTMMPGLQHKYAQTALILATNRCATYCRYCFRKRLVGLPTEEIL 127

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
              +   A+ YI+   +I  V+ +GGDP +LS   +++ L+ L  I H+  +RF +RVP+
Sbjct: 128 QRFN--DAVKYIENHEEINNVLISGGDPFVLSTGVVKEFLEKLSTISHLDFIRFGTRVPV 185

Query: 187 VDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
             P RI  + EL+  L++     + +Y+    NHP E +++A  A+SRL  +G+IL +Q+
Sbjct: 186 TFPDRIIEDDELLTLLEKNSQENRRIYVVTQFNHPREITQKATDAVSRLIRSGVILDNQT 245

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIVASLKEK 300
           VLLKG+NDDPE LA L    V + + PYY+           +F++ + +G +IV   K+K
Sbjct: 246 VLLKGVNDDPETLAELQNKLVSIGVNPYYVFQCRPVKRVKNNFQVPLYKGYEIVDRAKKK 305

Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
           ++G  +  +   +    GK++I
Sbjct: 306 LNGHSK-RFKYIMSHQTGKIEI 326


>gi|294650801|ref|ZP_06728149.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823316|gb|EFF82171.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194]
          Length = 338

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 94/292 (32%), Positives = 153/292 (52%), Gaps = 2/292 (0%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
            S  + + +       ++  +P DP+  Q +P   EL   PE   DP+G+   + + G++
Sbjct: 43  ASEQFKLRVPRAFVGKMSIGDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQMAGVL 102

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R LL L   C ++CR+CFRR     +   +  + D E    YI++   I EVI +
Sbjct: 103 HKYQSRFLLTLTGACAIHCRYCFRRHFPYQEN--LPKNDDWENIKHYIEQNPLINEVILS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL L+++++   L+ L  +  ++ILR HSRVPIV P R++ ELI  LK +   + + 
Sbjct: 161 GGDPLTLNNRKISLWLERLASLPQIKILRIHSRVPIVIPNRVDEELISILKNSRLRIIVV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H+NH  E  +   + + +L+   I +L+Q+VLLKG+ND  + L  L     + R+ PYY
Sbjct: 221 VHSNHAAELDDFTCSKLLQLSLHHITVLNQAVLLKGVNDSAKTLTELSNRLFDARVMPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           LH  D   G  HF L   E   I + +   + G   P  + ++ G   K  +
Sbjct: 281 LHVLDKVKGAQHFDLRSSEIDHIYSDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|226951346|ref|ZP_03821810.1| aminomutase [Acinetobacter sp. ATCC 27244]
 gi|226837868|gb|EEH70251.1| aminomutase [Acinetobacter sp. ATCC 27244]
          Length = 338

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 94/292 (32%), Positives = 153/292 (52%), Gaps = 2/292 (0%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
            S  + + +       ++  +P DP+  Q +P   EL   PE   DP+G+   + + G++
Sbjct: 43  ASEQFKLRVPRAFVGKMSIGDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQMAGVL 102

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H+Y  R LL L   C ++CR+CFRR     +   +  + D E    YI++   I EVI +
Sbjct: 103 HKYRSRFLLTLTGACAIHCRYCFRRHFPYQEN--LPKNDDWENIKHYIEQNPLINEVILS 160

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL L+++++   L+ L  +  ++ILR HSRVPIV P R++ ELI  LK +   + + 
Sbjct: 161 GGDPLTLNNRKISLWLERLASLPQIKILRIHSRVPIVIPNRVDEELISILKNSRLRIIVV 220

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
           +H+NH  E  +   + + +L+   I +L+Q+VLLKG+ND  + L  L     + R+ PYY
Sbjct: 221 VHSNHAAELDDFTCSKLLQLSLHHITVLNQAVLLKGVNDSAKTLTELSNRLFDARVMPYY 280

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           LH  D   G  HF L   E   I + +   + G   P  + ++ G   K  +
Sbjct: 281 LHVLDKVKGAQHFDLRSSEIDHIYSDVLASLPGYLVPKLVREIAGEKNKTPL 332


>gi|326566522|gb|EGE16668.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 12P80B1]
 gi|326569812|gb|EGE19862.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC8]
          Length = 345

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 98/295 (33%), Positives = 160/295 (54%), Gaps = 2/295 (0%)

Query: 33  NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
             + + +       +   + +DP+ RQ +P   E   +     DP+ +NNH+P+KG++H+
Sbjct: 49  KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHK 108

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y  R+LL +   C V+CR+CFR+           S+ + +  + YI + +++ EVI +GG
Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           DPL L++KRL+  L  +  I H++ +R H+R+P+V P R++ ELI  ++   K + I +H
Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
            NHP E  ++ IA   +L +AG  LL+QSVLL  INDD + L+ L +      I PYYLH
Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327
             D   G +HF + I +   +   L E + G   P  + + P    K  ID +  
Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPIDIYQY 341


>gi|149916871|ref|ZP_01905372.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
 gi|149822149|gb|EDM81540.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1]
          Length = 471

 Score =  346 bits (889), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 100/346 (28%), Positives = 175/346 (50%), Gaps = 22/346 (6%)

Query: 1   MQLRHKTLTSAQDLYN--ANLIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55
            Q++ +++T    L    A+L  +  + +++E      +   ++P +  LI+   P  DP
Sbjct: 65  WQMK-RSVTKVDKLLAGLADLASEAFVADLREGFRRAPMAVRVSPYMIALIDWSKPYADP 123

Query: 56  IARQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           I RQFIP   EL    P+   D + +   +P+ G+ HRYPD+ L   L  CPVYCRFC R
Sbjct: 124 IRRQFIPTGSELLPDHPKLDLDSLHEQADAPVPGLTHRYPDKALFLALDTCPVYCRFCTR 183

Query: 115 REMVGSQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
              VG     V       ++   EAA  YI  + ++ +++ +GGD   L    ++ + + 
Sbjct: 184 SYAVGLDTEEVEKVSLKPTNDRWEAAFEYIASRPELEDIVISGGDSYNLRADHIKTIGER 243

Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEF 219
           L  + +++ +RF ++ P V PQ+I  +   +  L       ++  K V I  H NHP E 
Sbjct: 244 LLAMPNIRRMRFATKGPAVMPQKILTDTAWVDALTSIHEQGRKLHKEVCIHTHFNHPNEI 303

Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
           ++ +  A++ L   GI + +QSVL +G+ND PE +  L++    + + PYY++  DL  G
Sbjct: 304 TQISQRAMNLLFERGITVRNQSVLQRGVNDTPEAMGQLVKRLAHVNVHPYYVYVHDLVRG 363

Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
             + R T++    I   ++   +G   P +++D PGG GK    ++
Sbjct: 364 VENLRTTVQTATAIEKEIRGMTAGFNTPVFVVDAPGGGGKRDAHSY 409


>gi|315185344|gb|EFU19118.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta thermophila
           DSM 6578]
          Length = 324

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 119/314 (37%), Positives = 175/314 (55%), Gaps = 5/314 (1%)

Query: 35  YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94
               +TP    L + H P   +ARQ  P   E   LP E  DP+ D  HSPL  +VHRYP
Sbjct: 3   LPFLVTPYYRRLADTH-PA--LARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYP 59

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           DR L+ +   C  YCRFCFRR    S + ++   ++ +A LAY++E  ++ EV+ +GGDP
Sbjct: 60  DRALILVTDRCAAYCRFCFRRHFTASGESSLTPGQE-QAILAYLREHPEVEEVLLSGGDP 118

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L+L   RL  +L  LR ++   ++R  +R+P+V P RI   L +    A +P+++  H N
Sbjct: 119 LMLPDTRLAALLSGLRALRPGLVIRLGTRIPVVLPTRITARLARI-LAAARPLWVVTHFN 177

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           HP E + EA AA+  L   G+ +++Q+VLL+G+ND  E LA L R  +   +KPYYL   
Sbjct: 178 HPAELTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQG 237

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334
           DLAAGTSHFR  +     +   L   +SGL  P   +DLP G GKV++   ++ +     
Sbjct: 238 DLAAGTSHFRTPLSHTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETW 297

Query: 335 YCITDHHNIVHDYP 348
           Y +      ++ YP
Sbjct: 298 YYLQGPDGGLYRYP 311


>gi|225569398|ref|ZP_03778423.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM
           15053]
 gi|225161606|gb|EEG74225.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM
           15053]
          Length = 393

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 114/349 (32%), Positives = 184/349 (52%), Gaps = 19/349 (5%)

Query: 1   MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q  LRH  +T+  +L              + I   Y +++     +LIN  +  D I +
Sbjct: 32  WQDELRH-NITTLDELAAYIPGIDTGDCNARNILEKYPMSVPRYYLSLINTDDEGDCIRK 90

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
             IP   E++I      D  G+++++ L+G+ H+YP  +LL   + C +YCR+CFR+ MV
Sbjct: 91  MSIPSFSEMDITGTF--DTSGESSNTKLRGLQHKYPQTVLLLSTNRCAMYCRYCFRKRMV 148

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           GS    ++  +D + A++YI E ++I  V+ +GGD  +L +  ++  L  L  I H+  +
Sbjct: 149 GSHTEEIV--EDIDKAVSYIAEHTEISNVLISGGDSFLLDNAAIEHYLSALCSIGHIDYI 206

Query: 179 RFHSRVPIVDPQRINP--ELIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           RF ++VP+V PQRI    EL   LK+    K +Y+    NHP E +E A+ A++ L + G
Sbjct: 207 RFGTKVPVVFPQRITDDRELQDILKKYCTKKQLYVMTQFNHPSELTEHAVNAVNCLKSLG 266

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKI 293
           +I+ +Q+VLLKGINDDP +LA LM+ F ++ I PYY+       G  + F++ +  G  I
Sbjct: 267 LIVKNQTVLLKGINDDPAVLAGLMKQFTKIGILPYYVFQCRPVTGVKNQFQVPLRTGYDI 326

Query: 294 VASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
           V   K   +G  +   Y L  P   GKV+I    I K+ +       H 
Sbjct: 327 VEQAKRLQNGNGKCFRYALSNP--DGKVEI----IGKMDDSHMIFKYHQ 369


>gi|289620587|emb|CBI52948.1| unnamed protein product [Sordaria macrospora]
          Length = 517

 Score =  345 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 107/342 (31%), Positives = 177/342 (51%), Gaps = 25/342 (7%)

Query: 31  ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKG 88
            +   +I +TP I + +N  +P +DPI RQF+P K   L   P+   D + +   SP+KG
Sbjct: 171 TAATMAIRMTPYILSRVNWQDPRHDPIVRQFLPMKSIMLPDHPKLTLDSLHETADSPVKG 230

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKS 142
           +VHRY D+ L     VCP YC FC R   VG+   TV       + +  E A AYI+ + 
Sbjct: 231 LVHRYTDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIESRP 290

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQC 199
           ++ +++ +GGD   L  ++L  + + L  + +++  RF S+   V P RI  E    +  
Sbjct: 291 ELQDIVVSGGDAYYLQPEQLTLIGERLISMPNIKRFRFASKGLAVAPTRILDESDGWVNA 350

Query: 200 L-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           L       K+AGK + +  H N+P E S  +  A  +L   G+++ +Q+VLL+G+NDD E
Sbjct: 351 LIDISNKAKKAGKSMALHTHFNNPNEISWVSSDATQKLFENGVMVRNQTVLLRGVNDDYE 410

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
            ++ L+R   +  I PYY++  D+     H R  ++    + A ++  I+G   P +++D
Sbjct: 411 TMSTLIRQLADNNITPYYVYQCDMVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVD 470

Query: 313 LPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347
           LPGG GK    +H    +K G  ++        D  N V++Y
Sbjct: 471 LPGGGGKRLACSHQNYDRKTGVSTFMAPAVTSRDKANKVYEY 512


>gi|167627832|ref|YP_001678332.1| lysine 2,3-aminomutase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597833|gb|ABZ87831.1| Lysine 2,3-aminomutase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 328

 Score =  345 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 99/316 (31%), Positives = 161/316 (50%), Gaps = 4/316 (1%)

Query: 10  SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
           S  +L     I  E+      I+  + + +    AN +   N NDP+ +Q +P  +E  I
Sbjct: 16  SPLELLEFLEIDSEEAKVSLNITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVI 75

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
                 DP+ + N++ + G++H+Y  R+LL     C ++CR+CFR+E     K  +   K
Sbjct: 76  DQAYSSDPLDEKNYNKVPGLLHKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRK 133

Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
           D   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++  R HSR+P+V P
Sbjct: 134 DWLKAFEYIANDQTIEEVILSGGDPLLNNDEVLEFFIENIQRISHIKRFRIHSRIPVVLP 193

Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
           +R+   L++ L E      + IH NHP E  +     +  +   GII+L+QS LLK IND
Sbjct: 194 ERMTNRLLKILSEHRLDTVLVIHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDIND 253

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
           D  +L  L    +  ++ PYY+H  D  +GT H+ +  +  + I+  L E  SG   P  
Sbjct: 254 DANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DCAKDIMKKLSEISSGFMVPIL 311

Query: 310 ILDLPGGYGKVKIDTH 325
             ++PG   K  +  H
Sbjct: 312 TKEIPGYPSKKWLSFH 327


>gi|239625483|ref|ZP_04668514.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales
           bacterium 1_7_47_FAA]
 gi|239519713|gb|EEQ59579.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales
           bacterium 1_7_47FAA]
          Length = 387

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 100/349 (28%), Positives = 181/349 (51%), Gaps = 18/349 (5%)

Query: 1   MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIAR 58
            +   +T +T A +L     +   Q++ +  I + + + +T    +LIN  NP  DP+ R
Sbjct: 23  WKEEVRTNITKASELREYMDLTDSQVEHLDRILSQFPMTVTRYYLSLINWDNPFTDPVFR 82

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
             IP  EE ++  +   D  G+ +++ + G+ H+Y    L+   H C +YCR CFR+ +V
Sbjct: 83  MCIPSIEETDLSGDF--DTSGEADNTVISGLQHKYSQTALILSTHRCAMYCRHCFRKRLV 140

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G          + E   AY+ + S+I  ++ +GGD  + S++ +++ L+    I H+ ++
Sbjct: 141 GISDDETA--DNIEEMAAYVSQHSEISNILISGGDAFLNSNQVIRRYLEQFCSIPHLDLI 198

Query: 179 RFHSRVPIVDPQRI--NPELIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           RF +R P+V P RI  +PEL+  LK     K +Y+    NHP E + EA  AI  L ++G
Sbjct: 199 RFGTRTPVVLPMRIYDDPELLALLKTYTQKKQIYVVTQFNHPNEITHEARKAIKALLDSG 258

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKI 293
           I++ +Q+VLLKG+ND+ + L  L++      + PYY+      +G  + F+L +++G +I
Sbjct: 259 IVVKNQTVLLKGVNDNSQTLGLLLKDLTRCGVIPYYIFQCRPVSGVKNQFQLPLKQGYEI 318

Query: 294 VASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
           V + K   +G  +   Y   +    GK++I    +  + +G      H 
Sbjct: 319 VEAAKHLQNGQGKCIRYA--MSHVTGKIEI----LGPMPDGQMLFKYHQ 361


>gi|145631426|ref|ZP_01787196.1| DNA repair protein RecO [Haemophilus influenzae R3021]
 gi|144982963|gb|EDJ90472.1| DNA repair protein RecO [Haemophilus influenzae R3021]
          Length = 297

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 94/281 (33%), Positives = 141/281 (50%), Gaps = 3/281 (1%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62
           L++  ++  + L  A  + ++  ++       +S+ +     + I   NP DP+  Q + 
Sbjct: 20  LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E         DP+ + N + +  I+H+Y +R+L      C V CR+CFRR     + 
Sbjct: 79  SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               + K  + AL YI   S+I EVIF+GGDPL+     L  ++K L  I H+Q LR H+
Sbjct: 139 PG--NKKSWQLALDYIATHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           R+P+V PQRI  E    L E+     +  H NHP E  +    A+ +L    + LL+QSV
Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANAMQKLNAVNVTLLNQSV 256

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
           LLK +NDD +IL  L     +  I PYYLH  D   G SHF
Sbjct: 257 LLKSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHF 297


>gi|167758002|ref|ZP_02430129.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704]
 gi|167664434|gb|EDS08564.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704]
          Length = 363

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 109/340 (32%), Positives = 187/340 (55%), Gaps = 16/340 (4%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           +T+  +L  +     E  D   ++ N Y +++     +L+NP + NDPI +  IP   E+
Sbjct: 11  VTTLDELSASIPQINEYGDIASKVLNKYPMSIPRYYLSLVNPDDANDPIRKMCIPSFLEM 70

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           ++      D  G+++++ L+G+ H+YP  +L+   + C +YCR+CFR+ MVGS    V++
Sbjct: 71  DLAGTF--DTSGESSNTKLQGLQHKYPQTVLMLSTNRCAMYCRYCFRKRMVGSGTQEVVA 128

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             D + A++YI +  +I  V+ +GGD  +L    +++ L +L  I H+  +RF ++ P+V
Sbjct: 129 --DIKEAISYILKHEEITNVLISGGDSFLLDTDIIREYLDSLSAIGHLDYIRFGTKTPVV 186

Query: 188 DPQRINPE--LIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
            PQRI  +  L   L+E G  K +YI    NHP E +E++I+A+  L   G+I+ +Q+VL
Sbjct: 187 FPQRILEDSRLQDILREYGHKKQIYIVTQFNHPRELTEDSISAVRCLQGLGLIVKNQTVL 246

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKIS 302
           LKG+ND PE LA L R F EL I PYY+       G  + F++ ++ G  I+   K   +
Sbjct: 247 LKGVNDCPETLARLFRRFTELGIIPYYIFQCRPVTGVMNQFQVPLQAGYDIIEQAKAMQN 306

Query: 303 GLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
           G  +   ++L  P   GK++I    + +  +G      H 
Sbjct: 307 GNGKCFRFVLSNP--DGKIEI----LGRTADGQMVFKYHQ 340


>gi|78486083|ref|YP_392008.1| hypothetical protein Tcr_1742 [Thiomicrospira crunogena XCL-2]
 gi|78364369|gb|ABB42334.1| L-lysine 2,3-aminomutase [Thiomicrospira crunogena XCL-2]
          Length = 323

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 95/317 (29%), Positives = 158/317 (49%), Gaps = 7/317 (2%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
           + S + L +   +  + +    +  + +   +    AN I   +PNDP+ +Q +P   E 
Sbjct: 2   IQSVEQLCDFVDLSADDLPI--DFDSAFPFKVPKHFANQIEKGSPNDPLLKQILPGLAEQ 59

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
            + P    DP+GD   +P   ++H+Y  R LL     C ++CR+CFRR     Q      
Sbjct: 60  ELYPGFSPDPVGDLAANPQPSLIHKYHGRALLIASPRCDIHCRYCFRRHFPYEQ----AK 115

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
            +  +AAL  I +   I EVI +GGDP+ LS   L +++  +  I HV  LR HSR PIV
Sbjct: 116 KQHWQAALENIAQDHSITEVILSGGDPMTLSENTLIELVHEIEAIPHVSTLRMHSRTPIV 175

Query: 188 DPQRIN-PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
            PQ+ + P L++ L ++     + +H NH  E + E+   + +   + + LL+Q+VLLKG
Sbjct: 176 APQKAHRPTLLKALSKSRLQTVLVVHCNHANELTPESADLMQQFRQSNVFLLNQTVLLKG 235

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           IND  + L+ L +      I PYY H  D  +G+ HF +   +   I   L++ + G   
Sbjct: 236 INDSADTLSALSKKLFSQGILPYYCHLLDKVSGSGHFDVQKHQAWAIFDQLRQALPGYLV 295

Query: 307 PFYILDLPGGYGKVKID 323
           P ++ ++ G   K  + 
Sbjct: 296 PRFVEEIAGEPYKTLLT 312


>gi|307353177|ref|YP_003894228.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
           petrolearius DSM 11571]
 gi|307156410|gb|ADN35790.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus
           petrolearius DSM 11571]
          Length = 358

 Score =  345 bits (885), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 92/324 (28%), Positives = 158/324 (48%), Gaps = 15/324 (4%)

Query: 5   HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
           +  LTS  ++          +  ++ + N++         +LIN  +P DPI +  IP  
Sbjct: 4   NACLTSIAEVNRQF---DAGLSGLEAVENNFPFLANQYYLSLINWDDPEDPIKKIIIPNS 60

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            E+        DP  +  ++   G+ H+Y    L+ +   C  +CRFCFR+ +    +  
Sbjct: 61  AEMVK--WGSLDPSMEARNTKSPGLQHKYQATALMLISDNCGGFCRFCFRKRLFIKPEDE 118

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            +  +D    + YI+   +I  V+ +GGD L++   RL K++  L  IKHV+ +R  +++
Sbjct: 119 KI--RDLSTDIDYIRSHPEISNVLLSGGDALMIPTSRLSKIVSALFSIKHVKSVRIGTKM 176

Query: 185 PIVDPQRINPE--LIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
           P  +P RI  +  L   ++E   +GK +Y     NHP E ++EA  A+  L  +G  L +
Sbjct: 177 PAYNPFRITGDESLQAMIQENSRSGKMLYFMTQFNHPRELTKEAKEAMDLLRLSGASLAN 236

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+ +L G+N+DPE L+ L     E    PYYL     AAG  HF + +E   +I    K 
Sbjct: 237 QTPILNGVNNDPETLSGLCSNLAEAGNVPYYLFQCRPAAGNRHFTVPVENTYEIYEKAKR 296

Query: 300 KISGLCQP-FYILDLPGGYGKVKI 322
            +SGL +   Y+  +    GK+++
Sbjct: 297 SLSGLAKRARYV--MSHATGKIEV 318


>gi|269469270|gb|EEZ80789.1| lysine 2,3-aminomutase [uncultured SUP05 cluster bacterium]
          Length = 314

 Score =  345 bits (885), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 98/284 (34%), Positives = 161/284 (56%), Gaps = 6/284 (2%)

Query: 33  NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
            H+ I +    ANLI+ +NP DP+ +Q I  +            P+ D +++P++G++H+
Sbjct: 31  QHFPIKIPLEFANLIDKNNPEDPLLKQVINSQARFGSSEFFLS-PLDDESNAPVEGLIHK 89

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           YP+R+LL    VC ++C++CFR+    ++   +    +  A   YI+  +QI EVI +GG
Sbjct: 90  YPNRVLLIASRVCAIHCQYCFRQNFNYAEHDAL---SNWLAIEDYIRAHTQINEVILSGG 146

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           DPL LS ++LQ +++ +  I H++ LR HSR  +V P RI  +L Q L +    V + +H
Sbjct: 147 DPLSLSDEKLQALIQKIERIPHIRTLRIHSRSAVVTPSRITDQLAQILNQTSLNVVVVLH 206

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
           +NH  E S E +  I +L+   I LL+QSVLLKG+ND  + L++L     +  + PYYLH
Sbjct: 207 SNHANELSSEFVKNIGKLSQ--ITLLNQSVLLKGVNDSAQALSDLSLQLFDAGVLPYYLH 264

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
             D  +G  HF +  +  +++   LK+ +SG   P  + D  G 
Sbjct: 265 LLDKVSGAEHFLVGDQCAKELHQQLKKNLSGYLVPRLVRDENGE 308


>gi|328675885|gb|AEB28560.1| Lysine 2,3-aminomutase [Francisella cf. novicida 3523]
          Length = 328

 Score =  344 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 102/316 (32%), Positives = 163/316 (51%), Gaps = 4/316 (1%)

Query: 10  SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
           S  +L     I   Q     +++  + + +    AN I   N NDP+ +Q +P  +E  I
Sbjct: 16  SPLELLEFLQIDINQARVSIDVTKSFKMIVPKSFANRIQKGNINDPLLKQVLPIVDEEVI 75

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
                 DP+ + N++ + G++H+Y  R+LL     C V+CR+CFR+E     K  +   K
Sbjct: 76  DQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKDNIPGRK 133

Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
           D   A  YI     I EVI +GGDPL+ + + L+  ++ ++ I H++ LR HSR+P+V P
Sbjct: 134 DWLQAFEYIANDQSIEEVILSGGDPLLNNDEVLEFFIENIQQIAHIKRLRIHSRIPVVLP 193

Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
           +RI  +L++ L E      + IH NHP E  +     +  +   GII+L+QS LLK IND
Sbjct: 194 ERITTKLLRVLSEHRLDTILVIHVNHPNELDDNISEVLKEIHKHGIIILNQSTLLKDIND 253

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
           D  +L  L    +  ++ PYY+H  D  +GT H+ +  +  + I+  L E  SG   P  
Sbjct: 254 DANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMVPVL 311

Query: 310 ILDLPGGYGKVKIDTH 325
             ++PG   K  +  H
Sbjct: 312 TKEIPGYPSKKWLSFH 327


>gi|307298212|ref|ZP_07578016.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916298|gb|EFN46681.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 364

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 103/326 (31%), Positives = 177/326 (54%), Gaps = 14/326 (4%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           MQ +   LTS + +   N    EQI E+K++++ Y          LIN ++P+DPI R  
Sbjct: 1   MQ-KPTYLTSVEKIEELN---DEQITEMKKVTDVYPFRANDYYLGLINWNDPHDPIKRII 56

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  EEL+   +   D   ++ ++   G+ H+Y D  LL +  VC  +CRFCFR+ +  +
Sbjct: 57  LPDFEELDEWGD--LDASQEHIYTVAPGMEHKYKDTALLLVSKVCGSFCRFCFRKRLFST 114

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +   V++  D    + YI++  +I  V+ TGGD LILS ++L  +++ LR I HV I+RF
Sbjct: 115 ENKEVVN--DVTLGVEYIRKHKEITNVLLTGGDSLILSTEKLGDIVRQLREIDHVGIIRF 172

Query: 181 HSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
            S++   +P RI  +P+L   +K+     K +YI  H NHP E ++EAI  ++ L +AG 
Sbjct: 173 GSKMVAFNPYRIINDPDLPDMVKKYSTPKKRIYIMAHFNHPRELTDEAIRGLNILRDAGA 232

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
           ++ +Q+ +++G+ND  E++  L R    + I PYY+       G   + +  E G +I  
Sbjct: 233 VICNQTPMIRGVNDSVEVMTELFRKLSFIGIPPYYVFQCRPTKGNHTYAVPAENGYEIFK 292

Query: 296 SLKEKISGLCQPFYILDLPGGYGKVK 321
              + +SGL +    + +    GK++
Sbjct: 293 KSIDSVSGLAKRARFV-MSHATGKIE 317


>gi|283780175|ref|YP_003370930.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
           6068]
 gi|283438628|gb|ADB17070.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM
           6068]
          Length = 370

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 101/334 (30%), Positives = 167/334 (50%), Gaps = 20/334 (5%)

Query: 7   TLTSAQDLYNANLIK--KEQIDE----------------IKEISNHYSIALTPVIANLIN 48
           +L +  +L  A  +    E +                  +   +  + + +     + I 
Sbjct: 39  SLRTLPELLEAVGLTKSPEHLAATSIAGPSGAIDPAFVPLDAAAEQFRVLVPGPYLSRIE 98

Query: 49  PHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
             NP DP+  Q +P   E++   +   DP+GD     L G++ +Y  R L+ L   C V+
Sbjct: 99  RGNPADPLLLQVLPVAGEMSSPADFLTDPVGDRESERLPGLLQKYDGRALMILSGSCAVH 158

Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           CR+CFRR     +    L+    + A+  I     + EVI +GGDPL +    L ++   
Sbjct: 159 CRYCFRRHYPYDETPRGLA--GWQPAIDEIAADESVQEVILSGGDPLTIVDSTLAELAHR 216

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
              I H++ LR HSRVP+V P+R+N ELI  ++      Y+ +H NHP E      AA++
Sbjct: 217 FAEIPHLKRLRVHSRVPVVIPERVNDELIGWMRGTRLAPYMVVHINHPREIDSAVAAALA 276

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288
           RL +AGI++++Q+VLL+G+ND+ E L  L  T V +R+ PYYL   D  AG +HF +   
Sbjct: 277 RLVDAGIVVMNQAVLLRGVNDNFEALHELCETLVNMRVLPYYLSQLDRVAGAAHFLVEES 336

Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            G++++  L+  + G   P Y+ ++PG   K  +
Sbjct: 337 RGRELIEQLRASLPGYAIPRYVAEIPGRSSKSPL 370


>gi|268323643|emb|CBH37231.1| conserved hypothetical protein [uncultured archaeon]
          Length = 366

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 98/322 (30%), Positives = 177/322 (54%), Gaps = 11/322 (3%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           ++++   L     +  +++  ++EI + + + +T    +L++ ++P+DPI +  +P +EE
Sbjct: 10  SISTIAQLGEYMELDPKKVAILQEIIDRHPMRITRYYLSLLDENDPDDPIRKMAVPSEEE 69

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           LN++     D  G+  ++ + G+ H+Y    L+   + C +YCR+CFR+ +VG     ++
Sbjct: 70  LNLVGSY--DTSGERENTIMPGLQHKYAQTALILATNKCAMYCRYCFRKRLVGLPTKEIM 127

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
              +   A  YI+E  +I  V+ +GGDP ILS   L + L+ L  I H+  +RF +RVP+
Sbjct: 128 HRFN--GAAKYIEEHEEINNVLISGGDPFILSTVVLSEFLERLSDILHLDFIRFGTRVPV 185

Query: 187 VDPQRINPELIQCL-----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
             P RI  +              + +Y+    NHP E + +A  A+SRL  AG+I+ +Q+
Sbjct: 186 TFPDRILKDDKLLTLLGNNSHENRRIYVVTQFNHPREITAKATGAVSRLIRAGVIVDNQT 245

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQKIVASLKEK 300
           VLLKG+NDDPE LA L    V + + PYYL          S+F++ + +G +IV + KE+
Sbjct: 246 VLLKGVNDDPETLAELQNKLVSIGVIPYYLFQCRPVKRVKSYFQVPLYKGYEIVEAAKER 305

Query: 301 ISGLCQPFYILDLPGGYGKVKI 322
           ++G  +  +   +    GK++I
Sbjct: 306 LNGHSK-RFKYTMSHRTGKIEI 326


>gi|312213471|emb|CBX93553.1| hypothetical protein [Leptosphaeria maculans]
          Length = 595

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 104/369 (28%), Positives = 177/369 (47%), Gaps = 34/369 (9%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFI 61
           L+H  + + +D         + I  +K      +I LTP I + ++ +NP +DPI RQF+
Sbjct: 115 LKH--IRTKEDFIR------DAISALK--LAPMAIRLTPHILSRVDWNNPLDDPIRRQFL 164

Query: 62  PQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           P K   +      + D + +   SP+ G+VHRYP R L     +CPVYCRFC R   VG 
Sbjct: 165 PLKSGMIPDHEHMKLDSLNEEADSPVPGLVHRYPGRALFLATSICPVYCRFCTRSYAVGG 224

Query: 121 QKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
              TV       +    E    YI++   + +++ +GGD   L    L+++++ L  I H
Sbjct: 225 NTDTVAKRAQKPNRARWEVIFKYIEDNDSLQDIVLSGGDIFYLEPHLLREIVERLLSIPH 284

Query: 175 VQILRFHSRVPIVDPQRI---NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAI 224
           +  +R  ++   V P R    N   +  L       ++ GK V +  H NH  E +    
Sbjct: 285 IFRIRLATKGLSVAPGRFLDTNDGWMDTLMDISNQGRKLGKQVCLHTHINHASEITWVTR 344

Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
            A  RL   G+I+ +Q+VLL G+N++P+ +  L+ T   + I+PYY++  D+  G    R
Sbjct: 345 MAARRLFAHGVIVRNQTVLLNGVNNNPDAIKELITTLANINIQPYYVYQCDMVQGIEDLR 404

Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH--NIKKVGNGSYCITDHHN 342
             + E  ++   ++  +SG   P +++DLPGG GK  + T+    ++ G   Y       
Sbjct: 405 TPLSEILRLDKLMRGTLSGFMMPAFVIDLPGGGGKRLVSTYESYNEETGLAEYRAPGLPG 464

Query: 343 ----IVHDY 347
               +++ Y
Sbjct: 465 QKGEMIYRY 473


>gi|114319844|ref|YP_741527.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226238|gb|ABI56037.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 348

 Score =  342 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 155/319 (48%), Gaps = 3/319 (0%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + +   ++L     +    +   +  +  + + +       I P +P+DP+ RQ +P   
Sbjct: 20  RAVRDPRELLQRLDLPMTLLPAAESAARLFPLRVPEPWLARIRPGDPDDPLLRQVLPLAA 79

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E         DP+GD       G++H+Y  R+LL     C ++CR+CFRR        + 
Sbjct: 80  EHETPAGFTADPVGDAAAEANPGLLHKYHGRVLLITTGACAIHCRYCFRRHFPY--TESQ 137

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
               D  A LA++    ++ EVI +GGDPL LS +RL  + + L     V+ LR H+R+P
Sbjct: 138 AGRDDWRATLAWLDAHPEVDEVILSGGDPLTLSDRRLATLTEALAQRPQVRRLRLHTRLP 197

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +V P RI P L+  LK     V   IH+NH  E       A++RL  AG  LL+Q+VLL+
Sbjct: 198 VVLPDRITPGLMALLK-GPWEVVWVIHSNHAQELDSTVAGALARLREAGHWLLNQTVLLR 256

Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305
            INDD + LA L R   +L + PYYLH  D   G +HF +T    + + A L  ++ G  
Sbjct: 257 RINDDADTLAALSRQLFQLGVLPYYLHLLDRVQGAAHFEVTELRARALAAELAARLPGYL 316

Query: 306 QPFYILDLPGGYGKVKIDT 324
            P  + +  G   K  +  
Sbjct: 317 VPRLVREEAGEPAKTPVTP 335


>gi|238502959|ref|XP_002382713.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357]
 gi|220691523|gb|EED47871.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357]
          Length = 593

 Score =  342 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 111/360 (30%), Positives = 175/360 (48%), Gaps = 21/360 (5%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIAL--TPVIANLINP-HNPNDPIA 57
            Q+R    +S QD       + E I ++        +A+  TP I +LIN     +DPI 
Sbjct: 186 WQIRS---SSTQDYV----TRAEFIADVATGMKKAPMAVRLTPHILSLINWKEAYSDPIR 238

Query: 58  RQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
           RQFIP         P+ + D + + + SP+KG+VHRYPD++L     VCPVYCRFC R  
Sbjct: 239 RQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRYPDKVLFLATSVCPVYCRFCTRSY 298

Query: 117 MVGSQKGTVLSS------KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
            VG Q  TV         K  E    YI    ++ +V+ +GGD   L   +L+++  TL 
Sbjct: 299 SVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDVVVSGGDTFFLEPSQLREIGTTLL 358

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I H++ +RF S+   V P RI     +  ++ GK + +  H NHP E S     A  +L
Sbjct: 359 GIDHIRRIRFASKGLSVCPSRILDPSDEWTRK-GKNIALHTHFNHPQEISWITEHAAQKL 417

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290
            +  + + +Q+VLL  +N++   +  L+R   +  I+PYY++  D+  G    R  + + 
Sbjct: 418 FHNAVTVRNQTVLLNKVNNNVPTMKRLIRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDI 477

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT--HNIKKVGNGSYCITDHHNI-VHDY 347
             I + ++  I+G   P +++DLPGG GK    T  +   + G   +         VH Y
Sbjct: 478 LHIESHIRGTIAGFMTPSFVVDLPGGGGKRLASTFENYDTRTGVSRFLAPGVKGNTVHQY 537


>gi|254491873|ref|ZP_05105052.1| KamA family protein [Methylophaga thiooxidans DMS010]
 gi|224463351|gb|EEF79621.1| KamA family protein [Methylophaga thiooxydans DMS010]
          Length = 335

 Score =  342 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 102/324 (31%), Positives = 155/324 (47%), Gaps = 5/324 (1%)

Query: 1   MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q  L +  + +A DL     +        K+    + + +     + +   + NDP+ R
Sbjct: 14  WQHALSN-AINNADDLLEKLGLSGHLQAIDKDKIRQFPLRVPQSYVDKMRYGDANDPLLR 72

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q  P  +E         DP+GD+      GI+ +Y  R LL     C ++CR+CFRR   
Sbjct: 73  QVFPLIDEGYPAEGYLTDPVGDHLAVTSPGILQKYQGRALLLTTGACAIHCRYCFRRHFP 132

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            S    + S    + ++  +     I EVI +GGDPL L   +L K++  L  I H++ L
Sbjct: 133 YSDSNPLSS--QWQQSIEQLASDETISEVILSGGDPLSLHDDKLAKLVADLAEIPHLKRL 190

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R H+R+PIV P+RIN  L+  ++     V + IHANH  E    A  A+  L  AG  LL
Sbjct: 191 RIHTRLPIVLPERINDSLLNWIQATRFKVVVVIHANHANEIDAHAEQALISLKQAGCQLL 250

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLL+GIND  E L+ L     ++ + PYYLH  D  AG  HF +      K+V  L+
Sbjct: 251 NQTVLLRGINDSVESLSALSERLNDVDVMPYYLHLLDKVAGAQHFDVNQVRAVKLVDDLR 310

Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
           + + G   P  + +  G   K  I
Sbjct: 311 KVLPGYLVPRLVREQQGEASKTVI 334


>gi|88704864|ref|ZP_01102577.1| conserved hypothetical protein [Congregibacter litoralis KT71]
 gi|88701185|gb|EAQ98291.1| conserved hypothetical protein [Congregibacter litoralis KT71]
          Length = 345

 Score =  342 bits (877), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 100/329 (30%), Positives = 160/329 (48%), Gaps = 4/329 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  + + +  +L  A  +  E++       + + + +       +   N  DP+ RQ
Sbjct: 16  WQEQLQQAIRTPSELSAALGLTLEELPYSAAADDAFPLLVPAAFVARMEKGNAWDPLLRQ 75

Query: 60  FIPQKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
            +   +E        +DP+G+ + ++   G++ +Y  R LL     C V CR+CFRR   
Sbjct: 76  VLAVPQENLPAEGFSDDPVGETSLYADTPGVIQKYQGRALLVATGQCAVNCRYCFRRSYP 135

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
                   SSK+  AA+  +     I EVI +GGDPL+L    L  + + LR       L
Sbjct: 136 YGDNSQ--SSKERLAAIDTLLADPSIGEVILSGGDPLLLPDASLAAIARRLRGNTRGITL 193

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R H+R+PIV P R+   LI  L    + V + +H+NHP E   +   A+ RL + G+ +L
Sbjct: 194 RIHTRLPIVIPDRVTASLIDALMPREQRVVVVVHSNHPREIDHDTARALERLRDGGVTVL 253

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +QSVLLKGINDD ++LA L          PYYLH  D  AG++HF ++    ++I+  L 
Sbjct: 254 NQSVLLKGINDDADVLAELSDQLFAAGAMPYYLHMLDKVAGSAHFEVSELRARQILGQLA 313

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNI 327
            K  G   P   +++PG   K +I    +
Sbjct: 314 SKRPGYLVPKLAVEVPGADSKREIAPDYV 342


>gi|126642456|ref|YP_001085440.1| putative aminomutase [Acinetobacter baumannii ATCC 17978]
          Length = 280

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%)

Query: 47  INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106
           +N  +P DP+  Q +P   EL   PE   DP+G+   + L G++H+Y  R LL L   C 
Sbjct: 1   MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 60

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
           V+CR+CFRR     +   +  ++D      YI+    I EVI +GGDPL LS+++L   L
Sbjct: 61  VHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 118

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
           + L  +K V+ILR HSRVPIV P RI+ ELI  LK +   + + +H+NH  E  +   + 
Sbjct: 119 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 178

Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           + +L+   I +L+Q+VLLKG+ND  + L +L     E R+ PYYLH  D   G  HF L 
Sbjct: 179 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 238

Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             E   I   +   + G   P  + ++ G   K  +
Sbjct: 239 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 274


>gi|256827853|ref|YP_003156581.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577029|gb|ACU88165.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium
           baculatum DSM 4028]
          Length = 520

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 103/354 (29%), Positives = 172/354 (48%), Gaps = 13/354 (3%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QLRH  +   + L     +  + I+++  ++  Y + LTP  A+LI P   NDP+  Q +
Sbjct: 158 QLRH-AIEDVETLSKVVDLPAKAIEDVLRVTRTYRMRLTPYYASLILPGQVNDPVLLQAV 216

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  E ++    E   P    +HSP + I   YP  + +K  ++C +YC  C R   +G+ 
Sbjct: 217 PTGEMVDNAGVEI--PPVAADHSPARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIGA- 273

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           K  +   +    AL YI+   +I +V+ TGGD L+L +  L+ +L  L  I+HV++ R  
Sbjct: 274 KDRLYGKEAYGEALEYIRANPEIRDVLITGGDSLVLPNSMLEWLLGQLDAIEHVRMKRLG 333

Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
           +R+P+  PQRI+ EL+  L+ +   KP+ +    N   E +  + AA   ++     +++
Sbjct: 334 TRIPVTTPQRIDSELLDILEASSDKKPLRVVTQINTAQEITPVSKAAFQAISKRVAAVMN 393

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP--DLAAGTSHFRLTIEEGQKIVASL 297
           Q+VLLKGIND    +  L  T  E  ++PYY+ +          H R+ +  GQ I+ S+
Sbjct: 394 QAVLLKGINDSSVKMWKLCETIQEAYVRPYYVFNCSYRNPQF-KHLRVPVAVGQSIIESM 452

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD-HHNIVHDYPPK 350
              ISG   P Y   +    GK+ +   N+ + G G   +          YP  
Sbjct: 453 YGNISGDAIPRY---IATAGGKIPLHRTNVLEHGQGYVKMQKPWSGEQVSYPDP 503


>gi|153875802|ref|ZP_02003435.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
 gi|152067734|gb|EDN66565.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
          Length = 334

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 99/317 (31%), Positives = 161/317 (50%), Gaps = 8/317 (2%)

Query: 1   MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q  LR + + +   L     I + Q+     +  H+ + +       +   +PNDP+ R
Sbjct: 16  WQDELR-QAIHNPLHLLELLEIAESQLAHRLMVQPHFKLQVPKGYVARMQKGDPNDPLLR 74

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +P  +E   +     DP+GD+    + G++ +Y  RIL      C ++CR+CFR+   
Sbjct: 75  QVLPLIDEQKQVLGFGVDPVGDSAAEKVPGLLQKYQGRILWLTTTACAIHCRYCFRQHYP 134

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            S+          +  L  I+  + I EVI +GGDPL+L    L ++ K+L  I  VQ L
Sbjct: 135 TSKTKLY-----YQRVLDTIRADTSITEVILSGGDPLMLLDSDLAEMAKSLADIPQVQRL 189

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R H+R+PIV P R+N EL+  L E    + + +HANH  E   E  +A+ +L  AGI +L
Sbjct: 190 RLHTRLPIVLPTRVNNELLTWLTETRLQLIVVVHANHANEIDNEVKSALQKLVTAGITVL 249

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +QSVLL+GIND+   L  L     + R+ PYYLH  D   G +HF +  +   +++  ++
Sbjct: 250 NQSVLLRGINDNATALMALSEILFDSRVLPYYLHVLDRVQGAAHFEVPEQTALELLEKMR 309

Query: 299 EKISGLCQPFYILDLPG 315
             + G   P  + ++ G
Sbjct: 310 VALPGYLVPKLVREVTG 326


>gi|163783207|ref|ZP_02178201.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881541|gb|EDP75051.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 375

 Score =  340 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 114/375 (30%), Positives = 189/375 (50%), Gaps = 37/375 (9%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           MQ + K +     +     +K  + +E+K++++ ++        +LIN  +P DPI R  
Sbjct: 1   MQKKVKYIIKLDLIPQ---LKDREKEELKQVTDKFAFRTNDYYNSLINWDDPEDPIRRIV 57

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           IP  EEL++    +     ++ +  + G+ H+YPD  LL +  VC +YCRFCFR+ +  +
Sbjct: 58  IPTTEELDV--WGKLHASNESKYMKVHGLEHKYPDTALLLVTDVCGIYCRFCFRKRLFMN 115

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
               V   +D    L YI+   +I  V+ TGGDPL+L+  +L+K LK L  I HV+I+R 
Sbjct: 116 DNDEVA--RDVSEGLEYIRNHPEINNVLLTGGDPLVLATFKLEKTLKALAEIPHVRIVRI 173

Query: 181 HSRVPIVDPQRI--NPELIQCLK----EAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
            S++  V+P R+  +P L++  +    E GK +Y+  H NHP E ++EA  A+  +   G
Sbjct: 174 GSKMLAVNPFRVIDDPSLLELFEWFNTETGKKLYLMNHFNHPRELTKEARKAVELVQKTG 233

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
             L +Q+ +LKGIND+ E L  L+     + + PYY+      AG   +   IEE   +V
Sbjct: 234 TTLTNQTPILKGINDNEETLRELLEELSFMGVPPYYVFQCRPTAGNKTYSTKIEETIDLV 293

Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKI----------------DTHN-----IKKVGN 332
            S++ K+SGL     Y+  +    GK++I                D  N     I K   
Sbjct: 294 ESVRSKVSGLAARVRYV--MSHETGKIEILGKGSDLIFFRYHRAADPENAGKFMIYKRNP 351

Query: 333 GSYCITDHHNIVHDY 347
            ++   D+  +V +Y
Sbjct: 352 DAHWFDDYKELVEEY 366


>gi|254498454|ref|ZP_05111183.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12]
 gi|254352309|gb|EET11115.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12]
          Length = 328

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 111/324 (34%), Positives = 159/324 (49%), Gaps = 6/324 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  +  +S   L N   +  +    + E    +S  +    A  +   NP DP+  Q
Sbjct: 8   WQKKLAQGFSSVAALLNYLELPCDAGSLLAE--KQFSSRIPLGFAQRMQKGNPQDPLLLQ 65

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +    EL I      DP+ + + +PLKG++H+Y  R+LL L  VC V CRFCFRR    
Sbjct: 66  VLAVATELEIQDGYEFDPLRERDSNPLKGLIHKYHGRVLLTLTGVCAVNCRFCFRRHFPY 125

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +         +   AYI + S I EVI +GGDPL+ S     ++L+ L  I HV  +R
Sbjct: 126 --QDNNPGRHGFKDICAYIAKDSSITEVILSGGDPLLASDLVFSELLQQLEQIPHVHTVR 183

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILL 238
           FH+R+PIV P+RI+  L+  L        I +H NHP E   +E   A+  L  AG  LL
Sbjct: 184 FHTRIPIVFPERIDHGLLCVLATTKLKKVIVLHCNHPQELNDDEVRHALRALRQAGCHLL 243

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Q+VLL GIND+  ILA L +      + PYYLH  D   G +HF L +   Q I   L+
Sbjct: 244 NQTVLLSGINDNAPILAALSQALFAQDVIPYYLHILDKVKGAAHFDLPLATVQTIYQQLQ 303

Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
           + + G   P    + PG   K  +
Sbjct: 304 QLVPGYLLPRLACEEPGKLSKTLL 327


>gi|298528428|ref|ZP_07015832.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298512080|gb|EFI35982.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 370

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 96/362 (26%), Positives = 172/362 (47%), Gaps = 32/362 (8%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
           D+     +    ++++  + + +         +L+N  +P+DPI R  IP  +EL+    
Sbjct: 9   DINKVPGLTGRDLEQLAPVMDTFEFRSNEYYLSLVNWDDPDDPIRRIIIPSVQELDQ--W 66

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDT 131
            R D   + ++S L G+ H+Y    +      C  +CR+CFR+   +  ++  VL+  D 
Sbjct: 67  GRLDASNEQSYSVLPGLQHKYVSTAVFLASDACGGFCRYCFRKRLFIHPEQREVLT--DL 124

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
           +AA  Y++   +I  V+ TGGD L+LS  RL+K++  LR I HV+I+R  +++    P R
Sbjct: 125 DAACDYVRNHPEINNVLITGGDGLMLSTSRLEKIISRLRGIDHVKIIRIGTKLLSYSPYR 184

Query: 192 I--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           +  + EL++ +K+   P   +Y   H  HP E ++ ++ A  RL  AG IL +Q+ +L+G
Sbjct: 185 VLNDQELLEMVKKYSLPDKRIYFMTHYTHPREMTDVSLEACDRLIKAGGILCNQTPMLRG 244

Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306
           +NDDP++L  L      + + PYY+       G   + + +EE   +  + +   SGL +
Sbjct: 245 VNDDPQVLGELFNRLSYMGVAPYYIFICRPTVGNKPYAVPVEEAFNVYQNARSMCSGLGK 304

Query: 307 PFYILDLPGGYGKVK----------------IDTH-----NIKKVGNGSYCITDHHNIVH 345
               L +    GK++                 D       +I      +Y   D+  IV 
Sbjct: 305 RAK-LAMSHASGKIEALAMTDENIIFRYHRAADPDESGKVHICTRNPRAYWFDDYKEIVE 363

Query: 346 DY 347
            Y
Sbjct: 364 TY 365


>gi|13474986|ref|NP_106545.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
 gi|14025732|dbj|BAB52331.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099]
          Length = 427

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 112/374 (29%), Positives = 176/374 (47%), Gaps = 25/374 (6%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQ--IDEIKEISNHYSI--ALTPVIANLINPHN-PNDP 55
            Q  H  +T    L        +   I +++       +   +TP + NLI+  N   DP
Sbjct: 18  WQ-DHHAVTRVDQLREWMGADADGNLIRDVERGLARAPMALRITPYLLNLIDWSNFLEDP 76

Query: 56  IARQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           I +QFIP   EL    P  + D + +   SP+ G+VHRY D++LL     CPVYCRFC R
Sbjct: 77  IRKQFIPVGSELLPSHPLLKMDSLHERKSSPVDGLVHRYKDKVLLLATDRCPVYCRFCTR 136

Query: 115 REMVGSQKGTVLSSK------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
              VG    +VL  K        +  LAY++    I +V+ +GGD   L   RL  +   
Sbjct: 137 SYSVGLDTQSVLKKKVSPFQSRWDTILAYLRVTPVIADVVVSGGDCFRLKPSRLLAIGMG 196

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPE--LIQCL-------KEAGKPVYIAIHANHPYEF 219
           L  I  ++ +RF ++   V P +I  +      L       ++ G  +    H NHP E 
Sbjct: 197 LLSIPSIRRIRFATKGLAVLPMKITSDHKWTDALVNISDAGRDQGVEISFHTHFNHPREI 256

Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
           ++  IAA   L   GI + +QSVL+ G+NDDPE++  L++   +L I+PYY++  DL  G
Sbjct: 257 TDYTIAAAELLFKRGIRMRNQSVLMAGVNDDPEVMKQLVKKLSDLHIQPYYVYTCDLVDG 316

Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT--HNIKKVGNGSYCI 337
             H R ++    +I  +++   +G   P +++D PGG GK  + +  H   + G   Y  
Sbjct: 317 IEHMRCSVRLACQIEKAVRGITAGYNTPLFVVDTPGGGGKRDVHSFEHYNTQTGLAVYRA 376

Query: 338 TDHH-NIVHDYPPK 350
                + +  YP  
Sbjct: 377 LSVRPDQLFTYPDP 390


>gi|262193506|ref|YP_003264715.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
           DSM 14365]
 gi|262076853|gb|ACY12822.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum
           DSM 14365]
          Length = 473

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 94/354 (26%), Positives = 170/354 (48%), Gaps = 22/354 (6%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55
            Q ++ ++T    L  A   ++ +   D++        +   ++P + +LI+  +P  DP
Sbjct: 57  WQAKN-SITKPAKLLAALQEIVPQSFYDDVAAGFRKSPMSVRVSPYLLSLIDWDHPYEDP 115

Query: 56  IARQFIPQKEEL-NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           +  QFIP    L    P+   D + +   +P+ G+ HRY D+ L   L  CPVYCRFC R
Sbjct: 116 LRTQFIPLGSRLTQDHPKLSFDSLHEQADAPVPGLTHRYVDKALFLTLDTCPVYCRFCTR 175

Query: 115 REMVGSQKG------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
              VG                  + A  Y+  + ++ +++ +GGD   L  ++++ + +T
Sbjct: 176 SYAVGIDTEDVEKVSLKAREDRWDQAFRYVAARPELEDIVISGGDSYQLKARQIRHIGET 235

Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEF 219
           L  + +++ +RF ++ P V PQ++  + E +  L       ++  K V +  H NHP E 
Sbjct: 236 LLGMDNIRRIRFATKGPAVMPQKLITDTEWLDALTGIVELGRKLHKEVALHTHFNHPNEI 295

Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
           +     A+  L   GI + +QSVL +G+ND  E +  L++    L ++PYY++  D+  G
Sbjct: 296 TAITKQAMDILFERGITVRNQSVLQRGVNDTVETMQLLVKRLSYLNVQPYYVYMHDMVKG 355

Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
               R TI+ G  I   ++   +G   P +++D PGG GK  I ++       G
Sbjct: 356 VEDLRTTIQTGLDIEKHVRGITAGFNTPTFVVDAPGGGGKRAIHSYEYYDRDAG 409


>gi|149194496|ref|ZP_01871592.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus
           TB-2]
 gi|149135240|gb|EDM23720.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus
           TB-2]
          Length = 414

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 94/377 (24%), Positives = 163/377 (43%), Gaps = 40/377 (10%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQ 59
           M+ +  ++ S + L     + KE I+ IK +S  +   +   IA+L++  N  +DPI R 
Sbjct: 1   MRYKSYSVKSFEKLPFVRKMDKEDIENIKVVSKIFPFKINEYIASLVDWDNYKDDPIFRL 60

Query: 60  FIPQKEEL------------------------NILPEEREDPIGDNNHSPLKGIVHRYPD 95
             P K+ L                        N  P  + + I + N   L+G  H+Y +
Sbjct: 61  IFPHKDMLDSKDFEKLKNSNDEKLIYDIRMKLNPHPAGQMENIPEINGKRLEGSQHKYKE 120

Query: 96  RILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
            IL        C  YC FCFR            +SK+ E  + YI+    I +V+FTGGD
Sbjct: 121 TILFFPKQGQTCHAYCSFCFRWPQFIGINELKFASKEVEILIEYIKANPTITDVLFTGGD 180

Query: 154 PLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP-----ELIQCLK---EA 203
           PL++S K L+  +K L    I H++ +R  ++     P R        EL+   K   ++
Sbjct: 181 PLVMSTKLLKAYIKPLIEAKIPHLKNIRIGTKALSFWPYRFLTDEDANELLDLFKYIVDS 240

Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           G  +    H NH  E  ++E   A+ ++ + G I+ +QS LL+ IND  ++   + +  V
Sbjct: 241 GYHLAFMAHFNHYKELQTDEVKEAVKKILSTGAIIRTQSPLLRHINDSSKVWEIMWKEQV 300

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            L + PYY+          +F L + +  +I       +SGL +      +    GK+ +
Sbjct: 301 ALNMIPYYMFVARDTGAKRYFELPLSKAWEIYKGAISNVSGLARTVRGPSMSAKPGKIAV 360

Query: 323 DTHNIKKVGNGSYCITD 339
               + ++ N    + +
Sbjct: 361 V--GVSEINNEKVFVLN 375


>gi|87310204|ref|ZP_01092336.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645]
 gi|87287194|gb|EAQ79096.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645]
          Length = 346

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 101/323 (31%), Positives = 167/323 (51%), Gaps = 3/323 (0%)

Query: 1   MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q   K  L    +L     + +   +     ++ + + +    A  +   +P+DP+  Q
Sbjct: 25  WQNAMKAALRDPAELCRLLQLPEACSEAAIAAASDFPLFVPREFAAKMTLGDPHDPLLVQ 84

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   EL+       DP+GD+      G++ +Y  R LL     C V+CR+CFRR    
Sbjct: 85  VLPVLRELDSPQGFTVDPVGDDQAVLTPGLLQKYAGRALLVTTGACAVHCRYCFRRHFPY 144

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           ++  + ++      A+A +     I EV+ +GGDPL L+   L ++ + L  I H++ +R
Sbjct: 145 AEVPSGVA--AWSDAIAALAADPSIQEVLLSGGDPLTLADATLAQLAQQLAAIPHLRRIR 202

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PI+ PQRIN +L+  L        + IHANHP E     +AAI RL  AG+++L+
Sbjct: 203 VHTRLPIMIPQRINDQLLSWLVGTRLTPIVVIHANHPRELDLPVVAAIDRLNQAGVMVLN 262

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL G+NDD ++LA L    ++ R+ PYYLH  D   G +HF +  E G  ++  L+ 
Sbjct: 263 QAVLLAGVNDDVDVLAELSERLIDQRVTPYYLHQLDRVKGAAHFEVPRERGVDLIRQLRA 322

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
           ++ G   P Y+ ++ G   K  I
Sbjct: 323 RLPGYAVPRYVEEIAGQPNKTII 345


>gi|124431233|gb|ABN11266.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis]
          Length = 223

 Score =  339 bits (869), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            HRYPDR+LL + + CP+YCR C R+  VG    T+ +       + YI+   Q+ +V+ 
Sbjct: 1   THRYPDRVLLLVSNTCPMYCRHCTRKRRVGD-NDTIPNKSAILQGIDYIRNTPQVRDVLL 59

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDP +LS   L  +L  LR I HV+I+R  +R P+V P RI PEL   LK+  KPV++
Sbjct: 60  SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
             H NHP E ++ A  A+  LA+AGI L +Q+VLL GIND P I+  L+      R++PY
Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           YL+  DL+ G SHFR  + +G +I+ SL    SG C P Y++D P
Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223


>gi|162450720|ref|YP_001613087.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
 gi|161161302|emb|CAN92607.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56']
          Length = 461

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 101/371 (27%), Positives = 173/371 (46%), Gaps = 25/371 (6%)

Query: 1   MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55
            Q + K++T    L +    ++  + I +  E      +   ++P + +LI+ ++P  DP
Sbjct: 59  WQAK-KSITRPDKLLDTLRGMVSDDFIRDATEGFARAPMSVRVSPYMLSLIDWNDPYGDP 117

Query: 56  IARQFIPQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           +  QFIP     L   P+   D + +   +P+ G+ HRY D+ L   L  CPVYCRFC R
Sbjct: 118 LRTQFIPLASRFLPDHPKLGLDSLHERADAPVPGLTHRYADKALFLPLDTCPVYCRFCTR 177

Query: 115 REMVGSQKGTVLS------SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
              VG     V         +  + A AYI  + ++ +++ +GGD   L  ++L  + +T
Sbjct: 178 SYAVGIDTEEVEKTHFKVDEERWKRAYAYIASRPELEDIVVSGGDAYNLRPEQLGAIGET 237

Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEF 219
           L  + ++Q +R  ++ P V PQ+I  + E I  +       ++  K V I  H NHP E 
Sbjct: 238 LLRMPNIQRIRLATKGPAVMPQKILTDDEWIDAVTRTVELGRKLHKEVVIHTHFNHPNEI 297

Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
           +     A+++L   GI + +QSVL +G+ND PE +  L++    + + PYY++  DL  G
Sbjct: 298 TGVTRDAMNKLFERGITVRNQSVLQRGVNDTPETMKLLVKRLGHVHVHPYYVYIHDLVRG 357

Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
               R T+  G  I   ++   +G   P +++D PGG GK    +        G      
Sbjct: 358 VEDLRTTLATGLTIEKHVRGSTAGFNTPTFVVDAPGGGGKRDAHSFEHYDRTTGISVFEA 417

Query: 340 HH---NIVHDY 347
                   + Y
Sbjct: 418 PSVKPGQRYTY 428


>gi|156050603|ref|XP_001591263.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980]
 gi|154692289|gb|EDN92027.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 531

 Score =  337 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 106/358 (29%), Positives = 180/358 (50%), Gaps = 28/358 (7%)

Query: 18  NLIKKEQ-IDEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIPQKE-ELNILPE 72
            +I +E  I+++KE      +++   P I ++I+  NP +DPI RQFIP K  +L   P+
Sbjct: 159 GIITREDFIEDVKEGIKLAPMSIRLPPHILSIIDWENPFDDPIRRQFIPMKSSKLEDHPK 218

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------L 126
              D + +++ SP++G VHRY D+ L      CP+YCRFC R   +G     V       
Sbjct: 219 VELDSLHESDDSPVEGFVHRYYDKALFLATSQCPLYCRFCTRSWSIGPDMQNVKKTTFKP 278

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             K  E    YI++  Q+ +++ +GGD  IL+ + ++ + + L  I H++  RF ++   
Sbjct: 279 QRKRWEDIFTYIEDTPQLQDIVVSGGDCYILTAENIRLIGERLISIPHIKRFRFATKGLA 338

Query: 187 VDPQRINPE----------LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           V P RI  +          L    K+AGK + I  H NHP E +  +  A+ RL    + 
Sbjct: 339 VSPARILDDSDGWAAEMIRLSALAKKAGKSMAIHTHFNHPREMTWVSRMALQRLHENNVT 398

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           + +Q+VLLKG+NDD   ++NL++T  +  I PYY++  D+       R  +    ++   
Sbjct: 399 VRNQTVLLKGVNDDVATMSNLIKTVADNNIIPYYVYQADMVQYVEDLRTPLSTILQLERH 458

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347
           ++  I G   P +++DLPGG GK    ++       G  ++        +  N V++Y
Sbjct: 459 IRGSIGGFVTPNFVVDLPGGGGKRLAASYDSYDPITGRSTFTAPAVTGKNKENRVYEY 516


>gi|189200174|ref|XP_001936424.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187983523|gb|EDU49011.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 443

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 102/335 (30%), Positives = 170/335 (50%), Gaps = 22/335 (6%)

Query: 35  YSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHR 92
            +I LTP + +L++   P +DPI +QF+P +   +        D + + + SP+ G+VHR
Sbjct: 30  MAIRLTPHVLSLVDWTKPLDDPIRKQFLPLRSGIIPDHKHLELDSLHEEDDSPVPGLVHR 89

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKSQIWE 146
           YP R L     +CPVYCRFC R   VG+   TV       S K  E    +I++   + +
Sbjct: 90  YPGRALFLATSICPVYCRFCTRSYAVGANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQD 149

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL--- 200
           ++ +GGD   L    +++++  L  I H++ +R  S+   V P RI  +       L   
Sbjct: 150 IVVSGGDAYFLQPDHVKEIVYRLLNIPHIRRIRLASKGLAVAPGRILDDADPWTDALIEV 209

Query: 201 ----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
               +E GK V +  H NH  E +     A ++L   G+I+ +QSVLLKG+N+  + L +
Sbjct: 210 SNKGREMGKQVCLHTHINHANEITWITRLAANKLFKHGVIVRNQSVLLKGVNNHKDTLLD 269

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L++T  ++ I+PYY++  D+  G    R  ++E   +   L+ K+SG   P +++DLPGG
Sbjct: 270 LIKTLADMNIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKELRGKLSGFMMPSFVIDLPGG 329

Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNI----VHDY 347
            GK  + T    + G  +Y       +    V+ Y
Sbjct: 330 GGKRLVSTMESYQNGEATYRAPGLPGVKGEMVYRY 364


>gi|317148225|ref|XP_001822598.2| L-lysine 2,3-aminomutase [Aspergillus oryzae RIB40]
          Length = 453

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 109/349 (31%), Positives = 169/349 (48%), Gaps = 23/349 (6%)

Query: 22  KEQIDEIKEISNHYSIAL--TPVIANLINP-HNPNDPIARQFIPQKEELNI-LPEEREDP 77
            E I ++        +A+  TP I +LIN     +DPI RQFIP         P+ + D 
Sbjct: 91  AEFIADVATGMKKAPMAVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDS 150

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDT 131
           + + + SP+KG+VHRYPD++L     VCPVYCRFC R   VG Q  TV         K  
Sbjct: 151 LHETHDSPVKGLVHRYPDKVLFLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYW 210

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
           E    YI    ++ +V+ +GGD   L   +L+++  TL  I H++ +RF S+   V P R
Sbjct: 211 EPMFEYIARTPEVTDVVVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSR 270

Query: 192 I---NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
           I   + E  + L       +E GK + +  H NHP E S     A  +L +  + + +Q+
Sbjct: 271 ILDPSDEWTRVLIEISNRGREKGKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQT 330

Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
           VLL  +N++   +  L+R   +  I+PYY++  D+  G    R  + +   I + ++  I
Sbjct: 331 VLLNKVNNNVPTMKRLIRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTI 390

Query: 302 SGLCQPFYILDLPGGYGKVKIDTH--NIKKVGNGSYCITDHHNI-VHDY 347
           +G   P +++DLPGG GK    T      + G   +         VH Y
Sbjct: 391 AGFMTPSFVVDLPGGGGKRLASTFESYDTRTGVSRFLAPGVKGNTVHQY 439


>gi|330906439|ref|XP_003295474.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1]
 gi|311333210|gb|EFQ96428.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1]
          Length = 526

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 108/353 (30%), Positives = 177/353 (50%), Gaps = 28/353 (7%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQF 60
           QLR   + +  D        +E +  IK      +I LTP + +L++   P +DPI +QF
Sbjct: 90  QLRR--IRTKDDFI------EEAVAAIK--LAPMAIRLTPHVLSLVDWTKPLDDPIRKQF 139

Query: 61  IPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
           +P +   +        D + + + SP+ G+VHRYP R L     +CPVYCRFC R   VG
Sbjct: 140 LPLRSGIIPDHKHLELDSLHEEDDSPVPGLVHRYPGRALFLATSICPVYCRFCTRSYAVG 199

Query: 120 SQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
           +   TV       S K  E    +I++   + +++ +GGD   L    +++++  L  I 
Sbjct: 200 ANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQDIVVSGGDAYFLQPDHVKEIVYRLLNIP 259

Query: 174 HVQILRFHSRVPIVDPQRINPE---LIQCL-------KEAGKPVYIAIHANHPYEFSEEA 223
           H++ +R  S+   V P RI  +       L       +E GK V +  H NH  E +   
Sbjct: 260 HIRRIRLASKGLAVAPGRILDDADPWTDALIEVSNKGREMGKQVCLHTHINHANEITWIT 319

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
             A ++L   G+I+ +QSVLLKG+N+  + L +L++T  ++ I+PYY++  D+  G    
Sbjct: 320 RLAANKLFKHGVIVRNQSVLLKGVNNHKDTLLDLIKTLADINIQPYYVYQCDMVQGIEDL 379

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
           R  ++E   +   L+ K+SG   P +++DLPGG GK  + T    K G  +Y 
Sbjct: 380 RTPLQEIIDLDKDLRGKLSGFMMPSFVIDLPGGGGKRLVSTVESYKNGEATYR 432


>gi|171680131|ref|XP_001905011.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939692|emb|CAP64918.1| unnamed protein product [Podospora anserina S mat+]
          Length = 491

 Score =  335 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 25/342 (7%)

Query: 31  ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNI-LPEEREDPIGDNNHSPLKG 88
            +   +I +TP I + +N  NP +DPI RQF+P K  L    P+   D + +   SP+KG
Sbjct: 141 AAATMAIRMTPYILSRVNWENPRHDPIIRQFLPLKSVLIPDHPKLALDSLHEEADSPVKG 200

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKS 142
           +VHRY D+ L     VCP YC FC R   VG+   TV       + +  E A AYI+   
Sbjct: 201 LVHRYSDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIENTP 260

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQC 199
            + +++ +GGD   L   +L+ +   L  + +++  RF S+   V P RI  E    +  
Sbjct: 261 ALQDIVVSGGDSYYLQPDQLRMIGDRLIGMPNIKRFRFASKGLAVAPSRILDESDGWVNA 320

Query: 200 LKEAGKPVY-------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           L +                H NHP E S  +  A  +L   G+++ +Q+VLL+G+NDD +
Sbjct: 321 LIDISNKAKKAGKAVAWHTHFNHPNEISWISKDASQKLFEEGVMVRNQTVLLRGVNDDVD 380

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
            ++ L+R   + ++ PYY++  D+     H R  ++    + A ++  I+G   P +++D
Sbjct: 381 TMSKLIRDLADNKVFPYYVYQCDMVERVEHLRTPLQTILDLEARIRGSIAGFMMPQFVVD 440

Query: 313 LPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347
           LP G GK    ++     K G  +Y        D  N V++Y
Sbjct: 441 LPAGGGKRLACSYESYDPKTGLSTYMAPAVTGRDKENKVYEY 482


>gi|124431231|gb|ABN11265.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis]
          Length = 223

 Score =  335 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            HRYPDR+LL + + CP+YCR C  +  VG  K T+ +       + YI+   Q+ +V+ 
Sbjct: 1   THRYPDRVLLLVSNTCPMYCRHCTSKRCVGD-KDTIPNKSAILQGIDYIRNTPQVRDVLL 59

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GGDP +LS   L  +L  LR I HV+I+R  +R P+V P RI PEL   LK+  KPV++
Sbjct: 60  SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
             H NHP E ++ A  A+  LA+AGI L +Q+VLL GIND P I+  L+      R++PY
Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178

Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           YL+  DL+ G SHFR  + +G +I+ SL    SG C P Y++D P
Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223


>gi|291280226|ref|YP_003497061.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1]
 gi|290754928|dbj|BAI81305.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1]
          Length = 519

 Score =  335 bits (860), Expect = 5e-90,   Method: Composition-based stats.
 Identities = 98/355 (27%), Positives = 176/355 (49%), Gaps = 14/355 (3%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL+   +   + L     + ++ I ++  ++ HY + LTP  A+LI P N NDP+  Q +
Sbjct: 155 QLK-FAIEDVETLSKIIDLPEKAITDVLRVTKHYRMRLTPYYASLIMPGNINDPVLLQSV 213

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  E ++ +  E   P    +HSP + I   YP  + +K  ++C +YC  C R   +G +
Sbjct: 214 PTGEMVDNVGVEI--PPVAADHSPARLIDQFYPRVVTIKSTNMCAMYCTHCLRIAHIG-K 270

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           K  + + K    AL YI+    I +V+ TGGD  +L +  ++ +L+ L  I HV++ R  
Sbjct: 271 KDRIYNKKAYLEALEYIKNNKNIRDVLVTGGDAFVLPNSLIRWILEELDKIDHVKMKRLG 330

Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
           +R+P+  PQR++ EL+  L+E+   KP+ +    N   E +  +     +++     +L+
Sbjct: 331 TRIPVTTPQRVDQELLDILEESNDKKPLRVVTQINTAQEITPISKEVFKQISKRVSAVLN 390

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP--DLAAGTSHFRLTIEEGQKIVASL 297
           Q+VLL+GIND    +  L  T  E  ++PYY+ +         +H R+ ++ GQ I+  +
Sbjct: 391 QAVLLRGINDSKVKMWKLCETIQEAYVRPYYVFNCSYRNPQF-AHMRVPVQVGQDIIEGM 449

Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKK-VGNGSYCITD-HHNIVHDYPPK 350
              ISG   P Y   +    GK+ +   N+ +   +G+  +       +  YP  
Sbjct: 450 YGNISGDAIPRY---IATAGGKIPLHRTNVVEFAEDGNIILRKPWSGEIVKYPDA 501


>gi|254516177|ref|ZP_05128237.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
           NOR5-3]
 gi|219675899|gb|EED32265.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium
           NOR5-3]
          Length = 345

 Score =  335 bits (859), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 97/326 (29%), Positives = 165/326 (50%), Gaps = 4/326 (1%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QL++  + +  DL  A  I  E +         + + +    A  I   N  DP+ RQ +
Sbjct: 19  QLQN-AIRTPTDLAAAVGIALEDLPYSLAADRGFPLLVPRAFAARIERGNVADPLLRQIL 77

Query: 62  PQKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
             ++E  I+    +DP+ + + ++   G++ +Y  R LL +   C + CR+CFRR+   +
Sbjct: 78  AAQDETRIVTGYSKDPLAETSLYAGTPGLLQKYTGRALLVVTGQCAINCRYCFRRDYPYA 137

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
                 SS +  A +  + +   I E+I +GGDPL+L  +++  + + +   +    LR 
Sbjct: 138 DNAQ--SSAERLATIDRLLDDPSIGEIILSGGDPLLLPDEQIAAMARRIARHQRSVTLRI 195

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           H+R+P+V P+R+   LIQ L E G P  + +H+NHP E       AI  L  AG  +L+Q
Sbjct: 196 HTRLPMVIPERVTDSLIQALSERGLPSVMVLHSNHPNEIDAPTAHAIKSLREAGTTVLNQ 255

Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           SVLL G+ND PE+LA+L          PYY+H  D  AG +HF ++ +  ++I+  L   
Sbjct: 256 SVLLAGVNDKPEVLAHLSDRLFAAGALPYYIHMLDKVAGAAHFEVSEDSARRIMGELSGM 315

Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHN 326
             G   P  +++ PG   K +++   
Sbjct: 316 RPGYLVPRLVIERPGAGSKQQLEPIY 341


>gi|117924254|ref|YP_864871.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1]
 gi|117608010|gb|ABK43465.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1]
          Length = 305

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 100/291 (34%), Positives = 155/291 (53%), Gaps = 3/291 (1%)

Query: 33  NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
             + + LTP +A+ +      DPI RQF P  EEL   P    DP+ +   SP+ G+VH+
Sbjct: 16  RGFPMLLTPTMADCMRQPQEQDPIYRQFWPSAEELQNPPHYTTDPLQEAASSPMPGLVHK 75

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y  R LL L   CPV+CR+CFRR        + +  +  +  + ++ +   + E+I +GG
Sbjct: 76  YQGRALLHLTDACPVHCRYCFRRH---GAITSPMDPQAEQQLVDHLAQDHTLQEIILSGG 132

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           DPL+L+  +    +  L  + H+Q +R HSRVP+ DP R+   +++ L+   K V + IH
Sbjct: 133 DPLMLNAPKWHWWMTQLAQLPHLQRIRIHSRVPVADPSRLTIPMLETLQNTAKSVVLVIH 192

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
            NH  E +  +  A+     AG ++L+QSVLL G+ND  EILA L    V L + PYYLH
Sbjct: 193 CNHAQELTPASEVALQACRQAGFLVLNQSVLLAGVNDSAEILAKLNLALVGLGVLPYYLH 252

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             D   G +HF ++ +   +I+  L + + G   P  + + P   GK  I 
Sbjct: 253 LLDTVQGAAHFEVSPQRAMEIMRQLHQCLPGYALPKLVRERPELPGKEPIH 303


>gi|119946889|ref|YP_944569.1| lysine 2,3-aminomutase YodO family protein [Psychromonas ingrahamii
           37]
 gi|119865493|gb|ABM04970.1| L-lysine 2,3-aminomutase [Psychromonas ingrahamii 37]
          Length = 337

 Score =  332 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 98/324 (30%), Positives = 159/324 (49%), Gaps = 6/324 (1%)

Query: 1   MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q  L + T+ + Q L     I  E +    +    +S+ +       +   + NDP+ +
Sbjct: 16  WQKELAN-TVKNPQQLLQLLDISPENVPLSLKARKSFSMLVPMPFVKKMKKGDINDPLLQ 74

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q +P ++E  +      DP+ ++N S L G++H+Y  R+LL L   C + CR+CFRR   
Sbjct: 75  QVLPIEDEELVSEGYSTDPLEEHN-SALPGLLHKYQSRVLLILKSGCAINCRYCFRRHFP 133

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
              +   ++ K  +  + YI+   ++ EVI +GGDPL+     LQ V+  L  +  ++ L
Sbjct: 134 Y--QDNNINKKQLQEIITYIKSHPEVNEVILSGGDPLMSKDDFLQHVINELELLPQLRRL 191

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           R HSR+P+V P RI  +L     ++   V   +H NH  E  +    A+++L  AG+ LL
Sbjct: 192 RLHSRLPVVIPSRITDQLCHMFNKSRLNVVFVLHINHANEIDQIFKDAMNKLHQAGVQLL 251

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +QSVLLKGIND+ + L +L     E  I PYYL   D   G  HF L  +   ++   + 
Sbjct: 252 NQSVLLKGINDNSQALVDLSEALFEAHILPYYLFLLDKVQGAQHFDLPEQRAIQLTQEMS 311

Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322
             + G   P    ++ G   K  I
Sbjct: 312 AALPGYLVPRLSREIAGEKNKTLI 335


>gi|148358501|ref|YP_001249708.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby]
 gi|296105850|ref|YP_003617550.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy]
 gi|148280274|gb|ABQ54362.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby]
 gi|295647751|gb|ADG23598.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy]
          Length = 326

 Score =  332 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 107/323 (33%), Positives = 165/323 (51%), Gaps = 6/323 (1%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  +  TS  DL +   + + + +   E    +   +    A  +   NP DP+  Q
Sbjct: 8   WQKILAQGFTSTADLLDFLELPRSEGNLFAE--KQFPSRIPLGFAERMQKGNPKDPLLLQ 65

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            + +++EL +  +   DP+ ++N + +KG++H+Y  R+LL L  VC V CR+CFRR    
Sbjct: 66  VLAKEDELTVADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPY 124

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +      +  +   AYI     I EVI +GGDPL+ ++  L+++L++L  I HV  LR
Sbjct: 125 --QANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHVHTLR 182

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P+RI+  L+  L        I +H NHP E  E  + A S L  A   LL+
Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDESVLRACSDLKKATCYLLN 242

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL G+NDD  IL+ L     +  I PYYLH  D   G++HF + +   Q I   L+ 
Sbjct: 243 QSVLLAGVNDDAVILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLPRAQSIYHQLQS 302

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
            + G   P    + PG   K  +
Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325


>gi|118602356|ref|YP_903571.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567295|gb|ABL02100.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 315

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%)

Query: 24  QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83
           +I+  K+    + I +    A LI+  N NDP+ RQ I  K  L+        P+ +  +
Sbjct: 25  KIEAFKD--QDFPIKIPLEFAQLIDKSNKNDPLLRQVISSKV-LSKSENFSLLPLEEEKY 81

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           SP+ G++H+YP+R+LL    VC ++C++CFR+    S+   + +  + +    YI    +
Sbjct: 82  SPVAGLIHKYPNRVLLITSQVCAIHCQYCFRQNFNYSEHDAISNWNEVQ---NYIVNDVK 138

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I EVI +GGD L LS  +L  ++  +  I H++ LR H+R  +V P RI  +L   L ++
Sbjct: 139 INEVILSGGDLLSLSDDKLSILIDNIANIAHIKTLRIHTRSIVVMPSRITDKLADTLNQS 198

Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
              V I +H NH  E S +    I++L  +G+ LL+QSVLLKG+ND  +IL  L     +
Sbjct: 199 RLNVVIVLHTNHAQELSVKFAQKITKL--SGVTLLNQSVLLKGVNDSIKILTELCLKLFD 256

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           L I PYYLH  D   G   F +  ++  ++   LK  +SG   P  + D  G + K  +
Sbjct: 257 LGILPYYLHMLDKVQGAQDFLVKDDDAIQLHQQLKNNLSGYLVPKLVRDN-GNHSKDWL 314


>gi|78357789|ref|YP_389238.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220194|gb|ABB39543.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 384

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 106/346 (30%), Positives = 168/346 (48%), Gaps = 18/346 (5%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
           M  +H T TS     N+  +  ++   ++ +  +Y+        +LIN  +P DPI R  
Sbjct: 1   MTRQHATYTSC---INSLPLDAQEARALRPVMEYYAFRANDYYLSLINWDDPADPIRRII 57

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P  +E         DP  +  ++ + G+ H+Y D  +L     C   CRFCFR+ +   
Sbjct: 58  VPHPDETKD--WGELDPSDEARYTAVPGMQHKYRDTAILLAGKACGGLCRFCFRKRIF-- 113

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            +G      DT  ALAYI+   +I  V+ +GGDPL+L    L+ +LK L  ++H+Q +R 
Sbjct: 114 MEGGTPPVPDTGKALAYIRAHKEITNVLISGGDPLLLPLAELEHILKGLDTVEHLQFIRI 173

Query: 181 HSRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGI 235
            SR+P+ DP  I  N  L++ L    +P   +Y+  H NHP E S  A+ A+  L  AGI
Sbjct: 174 GSRMPVFDPGLIAGNTRLLELLSRYSRPGRKLYMQTHFNHPRELSPLALEAVDALQRAGI 233

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
           I+ +Q+ LL+G+ND PE L+ L        + PYYL       G  HF + IEEG  I+ 
Sbjct: 234 IMTNQTPLLRGVNDCPETLSELFAKLAGAGVPPYYLFVCRPTKGNRHFTVPIEEGYDILQ 293

Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
             ++ +SG  +      +    GK+++       V +       H 
Sbjct: 294 KAQKTLSGPAKRVR-YAMSHATGKIEV-----VSVTHDQVVFRRHR 333


>gi|307609109|emb|CBW98551.1| hypothetical protein LPW_03791 [Legionella pneumophila 130b]
          Length = 326

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 108/323 (33%), Positives = 164/323 (50%), Gaps = 6/323 (1%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  +  TS  DL +   + + + +   E    +   +    A  +   NP DP+  Q
Sbjct: 8   WQKILAQGFTSTTDLLDFLELPRSEGNLFAE--KQFPSRIPLGFAKRMQKGNPKDPLLLQ 65

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            + +++EL    +   DP+ ++N + +KG++H+Y  R+LL L  VC V CR+CFRR    
Sbjct: 66  VLAKEDELTEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPY 124

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +      +  +   AYI     I EVI +GGDPL+ ++  L+++L++L  I H+  LR
Sbjct: 125 --QANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLR 182

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P+RI+  L+  L        I IH NHP E  E  + A S L  A   LL+
Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDESVLQACSDLKKAACYLLN 242

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL GINDD  IL+ L     +  I PYYLH  D   G++HF + +   Q I   L+ 
Sbjct: 243 QSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLPRAQSIYHQLQS 302

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
            + G   P    + PG   K  +
Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325


>gi|311695938|gb|ADP98811.1| lysine 2,3-aminomutase-like protein [marine bacterium HP15]
          Length = 454

 Score =  330 bits (848), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 96/370 (25%), Positives = 158/370 (42%), Gaps = 48/370 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + +  T      +     + +E + E+K +++     +   + N LIN    PNDPI + 
Sbjct: 20  RFKVYTDRQLDKIEVIQNLPEETLFEMKVVASVLPFRVNEYVINELINWDKVPNDPIYQL 79

Query: 60  FIPQK--------------------------------EELNILP-EEREDPIGDNNHSPL 86
             PQK                                +ELN  P  + E  + + +   L
Sbjct: 80  VFPQKGMLKEEHYERMATMHREGADKKEIQAVAKEIRDELNPHPAGQMEMNMPELDGEVL 139

Query: 87  KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y + +L        C  YC FCFR       K   ++S + E    Y+QE +++
Sbjct: 140 DGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLKMASTEAEKLHGYLQEHTEV 199

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------- 195
            +++ TGGDP+++  K L + L+ L      H+Q +R  ++     P R   +       
Sbjct: 200 TDLLVTGGDPMVMKTKNLVQYLEPLLEPEFDHIQTIRIGTKALTFWPYRFVTDKDADELI 259

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
            L   L +AGK V I  H NH  E + E A  AI R+   G  + +Q  L+K +NDD + 
Sbjct: 260 DLFARLVDAGKHVAIMAHYNHWQEITTEIAEEAIRRIRATGAEIRAQGPLIKHVNDDADA 319

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A L +  V+L I PYY+         ++F + + E   I     +K+SGL +      +
Sbjct: 320 WAKLWKKEVQLGIIPYYMFVERDTGAKNYFEVPLAEAFHIYREAMKKVSGLARTARGPSM 379

Query: 314 PGGYGKVKID 323
             G GKV+I 
Sbjct: 380 SAGPGKVEIQ 389


>gi|54293293|ref|YP_125708.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens]
 gi|53753125|emb|CAH14572.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens]
          Length = 326

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 107/323 (33%), Positives = 164/323 (50%), Gaps = 6/323 (1%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  +  TS  DL +   + + + +   E    +   +    A  +   NP DP+  Q
Sbjct: 8   WQKILAQGFTSTTDLLDFLELPRSEGNLFAE--KQFPSRIPLGFAKRMQKGNPKDPLLLQ 65

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            + +++EL    +   DP+ + N++ +KG++H+Y  R+LL L  VC V CR+CFRR    
Sbjct: 66  VLAKEDELTEADDYVIDPLSE-NNTLIKGLLHKYRGRVLLTLTGVCAVNCRYCFRRHFPY 124

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +      +  +   AYI     I EVI +GGDPL+ ++  L+++L++L  I H+  LR
Sbjct: 125 --QANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLR 182

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P+RI+  L+  L        I IH NHP E  E  + A S L  A   LL+
Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDESVLRACSDLKKAACYLLN 242

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL GINDD  IL+ L     +  I PYYLH  D   G++HF + +   + I   L+ 
Sbjct: 243 QSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLPRARSIYHQLQS 302

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
            + G   P    + PG   K  +
Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325


>gi|54296337|ref|YP_122706.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris]
 gi|53750122|emb|CAH11514.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris]
          Length = 326

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 108/323 (33%), Positives = 165/323 (51%), Gaps = 6/323 (1%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  +  TS  DL +   + + + +   E    +   +    A  +   NP DP+  Q
Sbjct: 8   WQKILAQGFTSTTDLLDFLELPRSEGNLFAE--KQFPSRIPLGFAKRMQKGNPKDPLLLQ 65

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            + +++EL    +   DP+ ++N + +KG++H+Y  R+LL L  VC V CR+CFRR    
Sbjct: 66  VLAKEDELTEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPY 124

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +      +  +   AYI     I EVI +GGDPL+ ++  L+++L++L  I H+  LR
Sbjct: 125 --QANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLR 182

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P+RI+  L+  L        I +H NHP E  E  + A S L  A   LL+
Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDESVLRACSDLKKAACYLLN 242

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL GINDD  IL+ L  T  +  I PYYLH  D   G++HF + +   Q I   L+ 
Sbjct: 243 QSVLLAGINDDAGILSKLSHTLFDYGIMPYYLHLLDKVKGSAHFDMPLPRAQSIYHQLQS 302

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
            + G   P    + PG   K  +
Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325


>gi|220934891|ref|YP_002513790.1| radical SAM domain-containing protein [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219996201|gb|ACL72803.1| radical SAM domain-containing protein [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 455

 Score =  330 bits (846), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 95/364 (26%), Positives = 153/364 (42%), Gaps = 49/364 (13%)

Query: 9   TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEE 66
            S + +     + + Q  E+K +++     +   + N LI+  N P DPI +   PQK  
Sbjct: 27  RSLEKIPQLAKLSEAQRFEMKVVASVLPFRVNEYVINELIDWSNIPADPIFQLTFPQKGM 86

Query: 67  LNILPEEREDPIG----DNNH-----------------------------SPLKGIVHRY 93
           L     ER   +     D  H                               ++G+ H+Y
Sbjct: 87  LAPESYERMAELHRRGADKAHISALAKELRDGLNPHPAGQLEMNLPRVNGEVVEGLQHKY 146

Query: 94  PDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
            + +L        C  YC FCFR       K   ++S   +  L Y++E  Q+ +++ TG
Sbjct: 147 RETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLRIASNQKDQVLGYLREHPQVTDLLVTG 206

Query: 152 GDPLILSHKRLQKVLKTLR---YIKHVQILRFHSRVPIVDPQRINPE--------LIQCL 200
           GDP+++  K L + L+ L     + HVQ +R  ++     P R   +        L+  L
Sbjct: 207 GDPMVMKTKNLAQYLEPLMEDDSLAHVQTVRIGTKALTFWPYRFVTDNDADELLDLLTRL 266

Query: 201 KEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
            ++G+ V I  H NH  E  +  A  AI RL   G+ + SQ  LL  INDDP + A L +
Sbjct: 267 VKSGRQVAIMAHYNHWRELETPIAREAIRRLRETGVEIRSQGPLLAHINDDPAVWARLWK 326

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
           T V+L I PYY+          +F + +     I     +++SGL +      +  G GK
Sbjct: 327 TQVQLGIIPYYMFVERDTGARHYFEVPLARAANIYREAMKQVSGLGRTARGPSMSAGPGK 386

Query: 320 VKID 323
           V+I 
Sbjct: 387 VEIQ 390


>gi|52840543|ref|YP_094342.1| L-lysine 2,3-aminomutase [Legionella pneumophila subsp. pneumophila
           str. Philadelphia 1]
 gi|52627654|gb|AAU26395.1| L-lysine 2,3-aminomutase, radical SAM domain protein [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
          Length = 326

 Score =  329 bits (844), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 108/323 (33%), Positives = 166/323 (51%), Gaps = 6/323 (1%)

Query: 1   MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  +  TS  DL +   + + + +   E    +   +    A  +   NP DP+  Q
Sbjct: 8   WQKILAQGFTSTTDLLDFLELPRSEGNLFAE--KQFPSRIPLGFAKRMQKGNPKDPLLLQ 65

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            + +++EL+   +   DP+ ++N + +KG++H+Y  R+LL L  VC V CR+CFRR    
Sbjct: 66  VLAKEDELSEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPY 124

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +      +  +   AYI   S I EVI +GGDPL+ ++  L+++L++L  I H+  LR
Sbjct: 125 --QANNPGRRGWKEVCAYIANDSSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLR 182

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P+RI+  L+  L        I +H NHP E  E  + A S L  A   LL+
Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDESVLRACSDLKKAACYLLN 242

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLL GINDD  IL+ L     +  I PYYLH  D   G++HF + +   Q I   L+ 
Sbjct: 243 QSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLLRAQSIYHQLQS 302

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
            + G   P    + PG   K  +
Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325


>gi|270157927|ref|ZP_06186584.1| KamA family protein [Legionella longbeachae D-4968]
 gi|289163802|ref|YP_003453940.1| lysine aminomutase [Legionella longbeachae NSW150]
 gi|269989952|gb|EEZ96206.1| KamA family protein [Legionella longbeachae D-4968]
 gi|288856975|emb|CBJ10789.1| putative lysine aminomutase [Legionella longbeachae NSW150]
          Length = 327

 Score =  328 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 95/323 (29%), Positives = 156/323 (48%), Gaps = 5/323 (1%)

Query: 1   MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q +  +  TS  +L     +     +   +    +   +    A  +   NP+DP+  Q
Sbjct: 8   WQKKLAQGFTSVTELLTYLELPLSTGN--LDAEKQFPSRIPLGFAKRMQKGNPHDPLLLQ 65

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +    EL    E   DP+ +++++ ++G++H+Y  R+LL +  VC V CR+CFRR    
Sbjct: 66  VLASGYELQGSEEYSSDPLDEHSNNSVRGLLHKYHGRVLLTMTGVCAVNCRYCFRRHFPY 125

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
             +         +    YI + + I EVI +GGDPL+ S   L ++++ L  I H+  LR
Sbjct: 126 --QANNPGRAGLKHICDYIAQDTSITEVILSGGDPLLASDVVLGELIEQLEQIPHLHTLR 183

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+P+V P+RI+  L+  LK+      I +H NH  E  +     +  L      LL+
Sbjct: 184 IHTRIPVVFPERIDLNLLSLLKKVKLNKVIVLHCNHAQELDDSVRPVLHELRRIDCHLLN 243

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q+VLL GIND+  +LA+L +T     + PYYLH  D   G +HF L     + I   L+ 
Sbjct: 244 QTVLLAGINDNAHVLADLSQTLFSFGVLPYYLHVLDKVKGAAHFDLPFNTVKGIYQQLQN 303

Query: 300 KISGLCQPFYILDLPGGYGKVKI 322
            + G   P  + + PG   K  +
Sbjct: 304 LLPGYMLPRLVREEPGKSSKTLL 326


>gi|282890405|ref|ZP_06298933.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499787|gb|EFB42078.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 326

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 97/318 (30%), Positives = 154/318 (48%), Gaps = 6/318 (1%)

Query: 5   HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
            +  T  + L +   +      EI +    + + L   +A  I  +  +DPI +QF+P  
Sbjct: 14  RQNFTQWKKLADFLELDPSIQQEIFK-RPSFPLNLPKRLAEKIKKNTLDDPILKQFLPTL 72

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            E   L     DP+GD   +    ++H+Y  R L+     C + CRFCFR+      +  
Sbjct: 73  AEQKQLAGFTLDPVGDTQFTKAPKLLHKYNGRALIVCTSACVMNCRFCFRQNFDYEVQEK 132

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
               +     L  I     + E+I +GGDPL LS   L  +L  L +IKHV+ +RFH+R 
Sbjct: 133 GFQKE-----LELIAADETLQEIILSGGDPLSLSDTVLVHLLDALSHIKHVKRVRFHTRF 187

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           PI  P+RI+   +   +      +  +H NHP E  +     +  L   G+ILL+QSVLL
Sbjct: 188 PIGIPERIDDAFLNLFENRPFITWFVLHTNHPNELDDHIFHHLHLLQRKGVILLTQSVLL 247

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           KG+ND P++L  L    V   I PYYLH  D   G +HF ++ E G++++  + + + G 
Sbjct: 248 KGVNDCPKVLCELFNQLVNRGIIPYYLHQLDRVQGGAHFEVSEERGKELIQEIAKSLPGY 307

Query: 305 CQPFYILDLPGGYGKVKI 322
             P Y+ ++ G   K  +
Sbjct: 308 AVPKYVREIAGEPNKTPL 325


>gi|317121265|ref|YP_004101268.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885]
 gi|315591245|gb|ADU50541.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885]
          Length = 361

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 101/336 (30%), Positives = 171/336 (50%), Gaps = 10/336 (2%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
           D+     +  E+   ++ ++  Y   +     +LI+  +P+DPI R  IP + EL     
Sbjct: 7   DIREIEQLAAEERQRLRPVTETYVFRVNDYYLSLIDWDDPDDPIRRIVIPSEVEL--AEY 64

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
              DP  + ++    G  H+Y    LL +  VC  YCRFCFR+ +          S D E
Sbjct: 65  GSLDPSDEESNYVAPGCQHKYGPTALLLVSKVCGAYCRFCFRKRLFREDVEEHHVSMDVE 124

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
             L YI    +I  V+ TGGDPL+LS +RL ++L  LR I HV+++R  +++P  +P R+
Sbjct: 125 PGLRYIAAHPEITNVLLTGGDPLMLSPRRLDQILTRLRAIPHVKVIRIGTKIPAFEPMRV 184

Query: 193 NP--ELIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
               EL++ L+   +    ++ ++H NHP E +EEA+  I  L   G+ L++Q+ LL+ +
Sbjct: 185 TDNPELLEVLRRHSRADARIHFSLHFNHPREMTEEALRCIIALQEVGVTLVNQTPLLRRV 244

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307
           NDDP +LA L+       I PYY+      AG + F + + EG +IV   K ++SG  + 
Sbjct: 245 NDDPAVLAELLERLTWWGIAPYYIFQNRPVAGNADFVVPLREGYRIVEQAKARVSGYAKR 304

Query: 308 -FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342
             Y+  +    GK++I     +++    +   +  +
Sbjct: 305 VRYV--MSHATGKIEILAVEGERIYLKYHQARNPED 338


>gi|327398266|ref|YP_004339135.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411]
 gi|327180895|gb|AEA33076.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411]
          Length = 304

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 112/292 (38%), Positives = 170/292 (58%), Gaps = 8/292 (2%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           I  QF   K EL +     +DP+G+  HS  KG++HRY DR++L + + C  YCRFCFR+
Sbjct: 18  IKSQFCFSKGELFLNG--NKDPLGEKKHSKAKGLIHRYTDRVVLTVTNKCFAYCRFCFRK 75

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
               S +G  L     E ++ Y+++   + EV+ +GGDP  LS+K+L ++L  +R IKH+
Sbjct: 76  NNWQSFEGFSL-----EESVNYLKKTKNVREVLISGGDPFFLSNKKLAEILTAIRSIKHI 130

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
             +R  SRV    P RI+ +  + LK   KP++IA H NHP E ++E   +   L ++GI
Sbjct: 131 STIRIGSRVLSSLPIRIDNQTAEMLK-LFKPIWIAAHINHPDEITDEFKKSARLLLDSGI 189

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
            ++SQ+VLLK IND+   L  L  + V++ IKPYYL   D A G   FR++I++   ++ 
Sbjct: 190 PIVSQTVLLKNINDNETTLKKLFCSLVDIGIKPYYLFGCDQAVGNGIFRVSIDKALSLME 249

Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
            L+ KISGLC P +  DLP GYGKV ++ + I K     +   +      +Y
Sbjct: 250 KLRGKISGLCMPTFSFDLPSGYGKVTLEPNRIIKRNGNIFTFKNFEGKEINY 301


>gi|120556236|ref|YP_960587.1| radical SAM domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120326085|gb|ABM20400.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8]
          Length = 454

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 94/370 (25%), Positives = 155/370 (41%), Gaps = 48/370 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + +  T      +     + +E + E+K +++     +   + N LIN    PNDPI + 
Sbjct: 20  RFKVFTDRQLDKIEAIQNLPEETLFEMKVVASVLPFRVNEYVINELINWDKVPNDPIYQL 79

Query: 60  FIPQKEEL--------------------------------NILP-EEREDPIGDNNHSPL 86
             PQK  L                                N  P  + E  + + +   L
Sbjct: 80  VFPQKGMLKDEHYERMAQLHREGADKKDIQAAAKEIRDALNPHPAGQMEMNMPELDGEVL 139

Query: 87  KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y + +L        C  YC FCFR       K   ++S D E    Y+QE +++
Sbjct: 140 DGVQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLKMASTDAEKLHGYLQEHTEV 199

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINP-------- 194
            +++ TGGDP+++  K L + L+ L      H+Q +R  ++     P R           
Sbjct: 200 TDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTKALTFWPYRFVTDKDADELI 259

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
           EL   L + GK V I  H NH  E + + A  AI R+   G  + +Q  L+K +NDD + 
Sbjct: 260 ELFARLVDGGKHVAIMAHYNHWQEITTDIAEEAIRRIRATGAEIRAQGPLIKHVNDDADA 319

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A L +  V+L I PYY+         ++F + + E   I     +++SGL +      +
Sbjct: 320 WAKLWKKEVKLGIIPYYMFVERDTGAKNYFEVPLAEAYHIYREAMKQVSGLARTARGPSM 379

Query: 314 PGGYGKVKID 323
             G GKV+I 
Sbjct: 380 SAGPGKVEIQ 389


>gi|83771333|dbj|BAE61465.1| unnamed protein product [Aspergillus oryzae]
          Length = 464

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 113/387 (29%), Positives = 179/387 (46%), Gaps = 41/387 (10%)

Query: 1   MQLRHKTLTSAQDLYNAN----------------LIKKEQIDEIKEISNHYSIAL--TPV 42
            Q+++ +L S + L N                  + + E I ++        +A+  TP 
Sbjct: 65  WQMKN-SLQSPKALLNFLAAVLPSEIRSSSTQGYVTRAEFIADVATGMKKAPMAVRLTPH 123

Query: 43  IANLINP-HNPNDPIARQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRI-LL 99
           I +LIN     +DPI RQFIP         P+ + D + + + SP+KG+VHRYPD+    
Sbjct: 124 ILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRYPDKNDSY 183

Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIWEVIFTGGD 153
               VCPVYCRFC R   VG Q  TV         K  E    YI    ++ +V+ +GGD
Sbjct: 184 LATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDVVVSGGD 243

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL-------KEA 203
              L   +L+++  TL  I H++ +RF S+   V P RI   + E  + L       +E 
Sbjct: 244 TFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRVLIEISNRGREK 303

Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
           GK + +  H NHP E S     A  +L +  + + +Q+VLL  +N++   +  L+R   +
Sbjct: 304 GKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKRLIRKLAD 363

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             I+PYY++  D+  G    R  + +   I + ++  I+G   P +++DLPGG GK    
Sbjct: 364 NNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGGGGKRLAS 423

Query: 324 TH--NIKKVGNGSYCITDHHNI-VHDY 347
           T      + G   +         VH Y
Sbjct: 424 TFESYDTRTGVSRFLAPGVKGNTVHQY 450


>gi|196234182|ref|ZP_03133014.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus
           Ellin428]
 gi|196221741|gb|EDY16279.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus
           Ellin428]
          Length = 456

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 100/370 (27%), Positives = 169/370 (45%), Gaps = 25/370 (6%)

Query: 2   QLRHKTLTSAQDLYN-ANLIKKEQI-DEIKEISNHYSI--ALTPVIANLINPHNP-NDPI 56
           Q RH T+T+ + L      +  E   ++++   +H  +   ++P +  LI+  +P +DPI
Sbjct: 56  QNRH-TVTNPRQLKETLGALAPEGFYEDLQAALDHAPMALRISPYLLGLIDWRDPLHDPI 114

Query: 57  ARQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
             QF+P + +     P  + D + +   SP+ G+ HRYPD+ L      CPVYCRFC R 
Sbjct: 115 RTQFLPLRSQQQPDHPLLQLDSLHEQEDSPVPGLTHRYPDKALFLPQLSCPVYCRFCTRS 174

Query: 116 EMVGSQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
             VG+    V       S    E A AYI  +  + +++ +GGD   L    LQ + + L
Sbjct: 175 YAVGNDTPEVEKLALTTSLARWEQAFAYIASQPDLEDIVISGGDSYNLKADHLQLIGERL 234

Query: 170 RYIKHVQILRFHSRVPIVDPQRI------NPELIQCL---KEAGKPVYIAIHANHPYEFS 220
             + +++ +R+ ++   V PQ+I         L +     +   K V +  H NHP E +
Sbjct: 235 LKMPNIRRIRYATKGLCVMPQKILSDHAWTDALTRVAELGRSLHKDVVVHTHFNHPAEIT 294

Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
                A++ L   GI +  Q+VL + +NDDP  +  L+R    + + PYY++  D+  G 
Sbjct: 295 SITQDAMNVLVERGIHVRCQTVLQRTVNDDPATMTQLVRRLSYVNVHPYYVYMHDMVPGV 354

Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340
              R  +   QK+   ++   +G   P ++LD PGG GK  + +        G    T  
Sbjct: 355 EDLRTPLATAQKLEKYVRGATAGFNTPAFVLDAPGGGGKRDVHSPERYDRATGISVFTSP 414

Query: 341 H---NIVHDY 347
                    Y
Sbjct: 415 SVKPGKQFLY 424


>gi|91772254|ref|YP_564946.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
 gi|91711269|gb|ABE51196.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242]
          Length = 441

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 87/368 (23%), Positives = 155/368 (42%), Gaps = 48/368 (13%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
            R  TL++ +++       +EQ ++I   +  +   +   + + LIN  N PNDP+ R  
Sbjct: 14  FRAYTLSNYKEIPQIQNFTQEQQEDIGIAARIFPFRVNNYVIDELINWDNVPNDPMFRLT 73

Query: 61  IPQKEEL--------------------------------NILPEERED-PIGDNNHSPLK 87
            P K+ L                                N  P  + D  + + N   L+
Sbjct: 74  FPNKDMLLPPHYKEMKHLLHTAASEEEVQQAIHKIRLTLNPHPAGQLDKNVPELNGKVLE 133

Query: 88  GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           G+ H+Y + +L        C  +C FCFR       K    +S++ E  ++Y+QE  ++ 
Sbjct: 134 GMQHKYNETVLFFPTQGQTCHTFCTFCFRWAQFTGMKDLKFASREIETLVSYLQEHPEVK 193

Query: 146 EVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE-------- 195
           +V+FTGGDP+ +S   L++ ++ +    I+ ++ +R  ++     PQR   +        
Sbjct: 194 DVLFTGGDPMTMSANLLKRYIEPILEADIRTIENIRIGTKSLSYWPQRFVSDKDSEDILS 253

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           L   + +  K + I  H NHP E + +    AI  +   G  + +QS L+  INDDP I 
Sbjct: 254 LFSNVTDHNKHMAIMGHFNHPVELTTDTVKEAIKNIRATGAQIRTQSPLIAHINDDPVIW 313

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
             + R  V L   PYY+          +F   I +  +I     + +SGL +      + 
Sbjct: 314 EQMWREQVRLGCIPYYMFMVRNTGANHYFDTPISKAWEIFQEAYQNVSGLARTVRGPSMS 373

Query: 315 GGYGKVKI 322
              GK+ +
Sbjct: 374 TDPGKINV 381


>gi|193214957|ref|YP_001996156.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium
           ATCC 35110]
 gi|193088434|gb|ACF13709.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium
           ATCC 35110]
          Length = 465

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 89/366 (24%), Positives = 157/366 (42%), Gaps = 48/366 (13%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQ 63
            TL + +++     + ++ +  I  + + +   +   +   LI+  N PNDPI     PQ
Sbjct: 27  YTLKNFRNIQQLKHLPEDVVSAIAVVGHVFPFKVNSYVTEKLIDWGNAPNDPIFTLTFPQ 86

Query: 64  K--------------------------------EELNILP-EEREDPIGDNNHSPLKGIV 90
           K                                EELN  P  + E  +   N   + G+ 
Sbjct: 87  KGMLLPHHYEIVQALLAENAPKSKLAKAINQIREELNPHPAGQLEFNVPKLNGQKIDGLQ 146

Query: 91  HRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           H+Y +  L        C  YC +CFR    G      +++   E  +AY++  ++I +V+
Sbjct: 147 HKYNETALFFPSEGQSCHAYCTYCFRWPQFGENDDLKIATNQIENVIAYLKHHTEISDVL 206

Query: 149 FTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE--------LIQ 198
            TGGDPL +S K L K +  L    + H++ +R  ++     P R   E          +
Sbjct: 207 ITGGDPLTMSAKSLSKYVLALLSEDLPHIRTIRIGTKTLTYWPYRFLTEKDSEQLLDAFR 266

Query: 199 CLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
            +  +GK + +  H NHP E  + E   AI R+   G ++ +QS +++GINDD +I + L
Sbjct: 267 MIVRSGKHLALMTHFNHPVELETPEVAEAIQRIRETGAVIRTQSPIIRGINDDAKIWSAL 326

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
            +  V L + PYY+  P        FR+++    +I     + +SG+C+      +    
Sbjct: 327 WKRQVSLGLVPYYMFIPRDTGAQHFFRISLVRAWEIFKEAYQHVSGICRTVRGPSMSTNP 386

Query: 318 GKVKID 323
           GKV++ 
Sbjct: 387 GKVQVM 392


>gi|257457951|ref|ZP_05623110.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580]
 gi|257444664|gb|EEV19748.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580]
          Length = 345

 Score =  326 bits (836), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 98/322 (30%), Positives = 165/322 (51%), Gaps = 9/322 (2%)

Query: 34  HYSIALTPVIANLINPHNP--NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91
                ++P    LI    P  +  + RQ +    E  +  EER DP+G+  +     +VH
Sbjct: 25  RLPEHVSPAFQALITSAEPAASAALRRQVLSSDSEQLVSEEERGDPLGEARYCVTPYLVH 84

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           +YP+R+LL     C  YCR+CFRRE      G  LS        +Y++   ++ E++ +G
Sbjct: 85  QYPNRVLLLSTGRCISYCRYCFRREFTARSSG-FLSEAQIGTVTSYLKTHPEVQEILVSG 143

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           GDP+      ++ +L+ LR +    ++R  +R P+  P+      I  L  + +P+++  
Sbjct: 144 GDPMSGGFGEIKHLLECLRSVCSDLLIRLCTRAPVFAPELFTEAFI-MLLRSVRPLWVIA 202

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271
           H NHP E  +    A++R  ++GI + +Q+VLL+G+ND+P +LA L    V + +KP YL
Sbjct: 203 HINHPAELGKAQRQALTRCIDSGIPVQTQTVLLRGVNDEPAVLAELFHALVCMGVKPGYL 262

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HN 326
              DLA GT+HFR+ +E+   I   L+ ++SGL  P + +DLP G GK  +         
Sbjct: 263 FQTDLARGTAHFRVPLEKAASIWKELRTRLSGLSLPQFAVDLPNGGGKFPLSALLRYEDI 322

Query: 327 IKKVGNGSYCITDHHNIVHDYP 348
           I  + +G +        ++ YP
Sbjct: 323 ISPLQDGRFSARGIDGKIYTYP 344


>gi|114320341|ref|YP_742024.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226735|gb|ABI56534.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1]
          Length = 456

 Score =  325 bits (833), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 88/390 (22%), Positives = 165/390 (42%), Gaps = 49/390 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQ 59
           + +  T  +   +   + + +++   ++ ++N     +   + N LI+    P+DPI + 
Sbjct: 20  RFQVFTARNMDKIPGLDRMPEDERFAMRVVANVLPFRVNEYVINELIDWEKAPDDPIYQL 79

Query: 60  FIPQK--------------------------------EELNILP-EEREDPIGDNNHSPL 86
            IPQ+                                 ELN  P  + +  +  ++   L
Sbjct: 80  TIPQRGMLAPALFDRMADVLRRDASREEINRVAWEIRNELNPHPAGQMKLNVPQHDGEKL 139

Query: 87  KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           +G+ H+Y + +L       VC  YC FCFR       K    +S + E   AY+++  ++
Sbjct: 140 EGMQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFVGDKDLQFASNEAERLHAYLRDHREV 199

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195
            +++ TGGDP+++  ++L++ L  L    ++HVQ +R  ++     P R   +       
Sbjct: 200 SDLLLTGGDPMVMKTRKLEEYLDPLLAADLEHVQTVRLGTKALTFWPYRFVTDKDADDLL 259

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
            L + L  +G+ V +  H NHP E  +  A  AI R+ + G+ + +Q  LL  IND  E 
Sbjct: 260 RLFERLVNSGRHVALMAHYNHPQELKTPIAEEAIRRIRDTGVEIRAQGPLLAHINDSSEA 319

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A L R  V L I PYY+          +F + +    +I     +++SGL +      +
Sbjct: 320 WAELWRKQVRLGIIPYYMFVERDTGARHYFEVPLARAWEIYRDAMKQVSGLGRTARGPSM 379

Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
             G GKV++     +  G   + +      
Sbjct: 380 SAGPGKVEVQG-ITEVQGEKVFVLRFIQGR 408


>gi|149375732|ref|ZP_01893500.1| Radical SAM domain protein [Marinobacter algicola DG893]
 gi|149359857|gb|EDM48313.1| Radical SAM domain protein [Marinobacter algicola DG893]
          Length = 454

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 92/370 (24%), Positives = 158/370 (42%), Gaps = 48/370 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + +  T      +     + +E + E+K +++     +   + N LI+ +  PNDP+ + 
Sbjct: 20  RFKVYTDRQLDKIDVIQNLPEETLFEMKVVASVLPFRVNEYVINELIDWNKVPNDPLYQL 79

Query: 60  FIPQK--------------------------------EELNILP-EEREDPIGDNNHSPL 86
             PQK                                +ELN  P  + E  + + N   L
Sbjct: 80  VFPQKGMLKDEHYERMAKMHREGAEKKEIQAVAKEIRDELNPHPAGQMEMNMPELNGEVL 139

Query: 87  KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y + +L        C  YC FCFR       K   ++S + E    Y+QE +++
Sbjct: 140 DGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLKMASTEAEKLHGYLQEHTEV 199

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195
            +++ TGGDP+++  K L + L+ L      H+Q +R  ++     P R   +       
Sbjct: 200 SDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTKALTFWPYRFVTDKDADELI 259

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
            L   L +AGK V I  H NH  E + + A  AI RL   G  + +Q  L+K +ND+ + 
Sbjct: 260 DLFARLVDAGKHVAIMAHYNHWQEITTDIAEEAIRRLRATGAEIRAQGPLIKHVNDNADD 319

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A L    V+L I PYY+         ++F + + E   I     +++SGL +      +
Sbjct: 320 WAKLWDKEVQLGIIPYYMFVERDTGAKNYFEVPLVEAFNIYREAIKQVSGLARTARGPSM 379

Query: 314 PGGYGKVKID 323
             G GKV++ 
Sbjct: 380 SAGPGKVEVQ 389


>gi|297563081|ref|YP_003682055.1| hypothetical protein Ndas_4154 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296847529|gb|ADH69549.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
          Length = 454

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 79/369 (21%), Positives = 150/369 (40%), Gaps = 47/369 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + R  T     +L     +  ++   ++ ++      +   + + LI+    P+DPI R 
Sbjct: 16  RFRAYTTKHLDELTTRAGLAADERLAVQAVATVLPFRVNSYVVDELIDWDAAPDDPIYRL 75

Query: 60  FIPQKEEL--------------------------------NILPEERED-PIGD-NNHSP 85
             PQ + L                                N  P  + D  +    N  P
Sbjct: 76  VFPQADMLPQDDVSRIADLLRSGAQRKELNEAANQIRARLNPHPAGQMDLNVPKLANEEP 135

Query: 86  LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + G+ H+Y + +L        C  YC +CFR            +S + +  + Y++   +
Sbjct: 136 IPGVQHKYKETVLFFPKQGQTCHAYCTYCFRWAQFVGDADLKFASSEIDQLVDYVRSHPE 195

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPE 195
           +  V+FTGGDP+I+    + K ++ L  I+H++ +R  ++     PQR            
Sbjct: 196 VTSVLFTGGDPMIMGEGVISKYIEPLLEIEHLEAIRIGTKALAYWPQRFVTDPDADDTLR 255

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           L + +  +GK +    H +HP E   E A  A+ R+   G ++ +Q+ L++ INDD  + 
Sbjct: 256 LFEKVVASGKNLAFMAHFSHPNEMRPELAQEAVRRIRATGAVIRTQAPLIRTINDDSAVW 315

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
            ++ RT +   + PYY+          +F + + E  +I     + +SGL +      + 
Sbjct: 316 ESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYEIFRGAYKSVSGLARTVRGPSMS 375

Query: 315 GGYGKVKID 323
              GKV +D
Sbjct: 376 ATPGKVCVD 384


>gi|292491849|ref|YP_003527288.1| L-lysine 2,3-aminomutase [Nitrosococcus halophilus Nc4]
 gi|291580444|gb|ADE14901.1| L-lysine 2,3-aminomutase, putative [Nitrosococcus halophilus Nc4]
          Length = 446

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 97/390 (24%), Positives = 162/390 (41%), Gaps = 49/390 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + +  T      +     +  E+  E++ ++      +   + N LI+  N P+DPI + 
Sbjct: 22  RFKVFTARQLDQIPQLQKLSAERRFEMEVVARVLPFRVNEYVINELIDWGNVPDDPIFQL 81

Query: 60  FIPQKE--------------------------------ELNILP-EEREDPIGDNNHSPL 86
            IPQ++                                ELN  P  + ED I   N   +
Sbjct: 82  TIPQRDMLAPEHFNRVASAIIRGADRKTLDAVIREVRAELNPHPAGQMEDNIPTLNGERV 141

Query: 87  KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           +G+ H+Y + +L       VC  YC FCFR       K   +++K+T    AY++   ++
Sbjct: 142 EGLQHKYRETVLFFPSSGQVCHSYCTFCFRWAQFVGDKELKIAAKETHQLQAYLRAHPEV 201

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP-------- 194
            +V+ TGGDPL++  + L+  L+ L      HV+ +R  ++     PQR           
Sbjct: 202 TDVLVTGGDPLVMKTRNLRAYLEPLLGEAFSHVKTIRIGTKSLTFWPQRFVTDDDADDLL 261

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
            L + ++ AGK + +  H NH  E     A  AI R+   G  + SQ  LL  INDD  I
Sbjct: 262 ALFEEIQGAGKHLALMAHYNHWQELEPAIAREAIRRVRATGAQIRSQGPLLAHINDDANI 321

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A L RT V L I PYY+         ++F + + +  +I     +K+SG+ +      +
Sbjct: 322 WARLWRTQVGLGIIPYYMFVERDTGARNYFEVPLIKAWQIYRDAIQKVSGIGRTARGPSM 381

Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
               GKV+I     +  G  +  +      
Sbjct: 382 SAHPGKVEIQGV-TEIQGEKAIVLRMIQGR 410


>gi|193211898|ref|YP_001997851.1| radical SAM domain-containing protein [Chlorobaculum parvum NCIB
           8327]
 gi|193085375|gb|ACF10651.1| Radical SAM domain protein [Chlorobaculum parvum NCIB 8327]
          Length = 433

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 89/381 (23%), Positives = 169/381 (44%), Gaps = 48/381 (12%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQF 60
            +  T  + Q L   + I  EQ+  IK ++  Y   +   +A NLI+  N P+DP+ R  
Sbjct: 4   FQSYTAENIQQLPQYDTIPPEQLHAIKVVAEVYPFRVNSHVAENLIDWSNIPDDPMFRLS 63

Query: 61  IPQKEEL--------------------------NILPEEREDPIGDN-------NHSPLK 87
            PQ   L                           I   +  +P G         +  PL 
Sbjct: 64  FPQAGMLSGEDFRTISDLVLSDADSQLIRQEARKIQLRQNPNPAGQMELNTPRLDGEPLH 123

Query: 88  GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           G+ H+Y + +L   L   VC  YC +CFR       +    +++  +  + Y++   ++ 
Sbjct: 124 GMQHKYRESVLFFPLEAQVCHAYCTYCFRWPQFSGLESLKFANESVDKLIDYLRSHPEVK 183

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----PELIQCL 200
           +VIFTGGDP+++S + ++K ++ L  +  ++ +R  ++     P R        +LI+  
Sbjct: 184 DVIFTGGDPMVMSTELIEKYMRPLLDVPTLRTIRIGTKSLSWWPGRFTTDSDADQLIRFF 243

Query: 201 KE---AGKPVYIAIHANHPYEFS-EEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
           +E   +GK + I  H +HP E    EA+ A+ R+ + G ++ SQS +++ +NDD E+   
Sbjct: 244 EEVVTSGKHLAIMAHMSHPREIDNPEAVDAVRRIRSTGAVIRSQSPVVRHVNDDSEVWEE 303

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           + +  V+L + PYY+          +F + + E   I      ++SGL +      +   
Sbjct: 304 MWQKQVQLGVIPYYMFLERDTGPKHYFEVPLAEALDIYNGAYRQMSGLGRTVRGPSMSCS 363

Query: 317 YGKVKIDTHNIKKVGNGSYCI 337
            GKV +   ++ ++ +    +
Sbjct: 364 PGKVIV--EDVTEINDEKLFV 382


>gi|298528426|ref|ZP_07015830.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298512078|gb|EFI35980.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 521

 Score =  322 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 106/353 (30%), Positives = 175/353 (49%), Gaps = 11/353 (3%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           QLR   + S + L +   +    ++E+  ++  Y + LTP  A LI P + +DP+  Q +
Sbjct: 158 QLR-YAIESPRTLESILNLPAGALEEVGRVTKDYRMRLTPYYAGLIMPESLDDPVLLQSV 216

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  E ++    E   P    +HSP + I   YP  + +K  ++C +YC  C R   +G +
Sbjct: 217 PTGEMVDNAGVEM--PPVAADHSPARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIG-K 273

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           K  +   +    AL YI+   +I +V+ TGGD  +L  K L+ +L  L  ++HV+I R  
Sbjct: 274 KDRIYPEQAYSEALDYIRRDRRIRDVLITGGDAFMLPDKVLRYMLSELDGMEHVRIKRLG 333

Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
           +R+P+  PQR++ EL+  L+E+   KPV +    N   E +  +  A  R++ A   +L+
Sbjct: 334 TRIPVTTPQRVDQELLDILEESNDKKPVRVVTQINTAQEITPVSREAFRRISKAVSAVLN 393

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLK 298
           Q+VLLKGIND    +A+L  T  E  ++PYY+ +        SH R+ +E+G+ IV  + 
Sbjct: 394 QAVLLKGINDSFVKMAHLCETIQEAYVRPYYIFNCSYRNPQFSHLRVPVEKGRDIVEGMY 453

Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD-HHNIVHDYPPK 350
             ISG   P Y   +    GK+ +   N+     G   +          YP  
Sbjct: 454 GNISGDAIPRY---IATAGGKIPLHRSNVLDREQGDIILQKPWSGEQVRYPDA 503


>gi|189500343|ref|YP_001959813.1| radical SAM domain-containing protein [Chlorobium phaeobacteroides
           BS1]
 gi|189495784|gb|ACE04332.1| radical SAM domain protein [Chlorobium phaeobacteroides BS1]
          Length = 434

 Score =  322 bits (826), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 91/368 (24%), Positives = 164/368 (44%), Gaps = 46/368 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59
           + R  T  +   L     I +EQI  +K ++  Y   +   +  NLI+  N P DPI R 
Sbjct: 3   KYRSYTADNLHTLPQYGEIPEEQIHIVKTVATVYPFRVNSYVTENLIDWSNIPEDPIFRL 62

Query: 60  FIPQKEELNILPEER--------------------------EDPIGDN-------NHSPL 86
             PQ+E LN    +R                           +P G         ++  L
Sbjct: 63  SFPQEEMLNPEDFQRMSGLVSTDAPQDIIRQAAREIQLLQNPNPAGQMELNTPLLDNEVL 122

Query: 87  KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            GI H+Y + +L       VC  YC +CFR       +    ++ D    L Y++E  ++
Sbjct: 123 HGIQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLESLKFANNDITLLLDYLKEHPEV 182

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
            ++IFTGGDP+++S   ++K ++ L  I  V+ +R  ++     P R   E         
Sbjct: 183 KDIIFTGGDPMVMSTALIKKYIQPLLDIPTVKTIRIGTKALSWWPYRFTAEHDSDEILSF 242

Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            + +  +GK + I  H +HP E  + +A+ AI+R+ + G ++ SQS +++ +NDD +I  
Sbjct: 243 FEQIVSSGKHLAIMAHISHPREIETSQAVDAINRIRSTGAVIRSQSPIVRHVNDDADIWE 302

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            + +  ++L I PYY+          +F + + E  +I  +  +++SGL +      +  
Sbjct: 303 AMWQKQLQLGIIPYYMFLERDTGPKQYFEIPLSEAVEIFNTAYQRMSGLGRTVRGPSMSC 362

Query: 316 GYGKVKID 323
             GK+ + 
Sbjct: 363 APGKIIVQ 370


>gi|72160676|ref|YP_288333.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX]
 gi|71914408|gb|AAZ54310.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX]
          Length = 453

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 78/368 (21%), Positives = 152/368 (41%), Gaps = 46/368 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + R  T     +L       +E+   I+ ++      +   + + LI+    P+DPI R 
Sbjct: 16  RFRAYTSKHLDELTARAGFGEEERLAIRAVATVLPFRVNSYVIDELIDWDAAPDDPIYRL 75

Query: 60  FIPQKEEL--------------------------------NILPEERED-PIGDNNHSPL 86
             PQ + L                                N  P  +    +   +  P+
Sbjct: 76  TFPQADMLPEADVARIADLLRKDAPRQEINRVASEVRARLNPHPAGQLQLNLPKMDDEPM 135

Query: 87  KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+YP+ +L        C  YC +CFR      +    ++S + +  +AY+++  ++
Sbjct: 136 PGVQHKYPETVLFFPKQGQTCHSYCTYCFRWAQFVGEPDLKMASDEIDRLVAYLRQHPEV 195

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPEL 196
             V+ TGGDP+I+    L++ ++ L  ++ ++ +R  ++     PQR            L
Sbjct: 196 TGVLLTGGDPMIMGEAVLRRYIEPLLEVETLESIRIGTKALAYWPQRFVTDPDADDTLRL 255

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            + +  +GK +    H +HP E   +    A+ R+ + G ++ +Q+ L++ IND  E  A
Sbjct: 256 FEQVVNSGKNLAFMAHFSHPRELEPDIVREAVRRIRDTGAVIRTQAPLIRTINDSSETWA 315

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            + RT V L + PYY+          +F + + +  +I       +SGL +      +  
Sbjct: 316 TMWRTQVRLGMIPYYMFVERDTGPQDYFAVPLAQAYEIFRKAYNSVSGLARTVRGPSMSA 375

Query: 316 GYGKVKID 323
             GKV +D
Sbjct: 376 TPGKVCVD 383


>gi|83648059|ref|YP_436494.1| lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396]
 gi|83636102|gb|ABC32069.1| Lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396]
          Length = 348

 Score =  321 bits (824), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 89/290 (30%), Positives = 145/290 (50%), Gaps = 2/290 (0%)

Query: 33  NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92
             + +  T      +   +P+DP+  Q +P   E   +     DP+ + +++  KGI+ +
Sbjct: 59  AQFPVRATRDYVRRMKKGDPSDPLLLQVLPLHLEQQEMIGYSADPLSEADYTASKGILQK 118

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y  R LL     C ++CR+CFRR    S+     S    + ALA +     + E+I +GG
Sbjct: 119 YHGRALLITTSACAIHCRYCFRRHFPYSEHRQ--SRAQWKEALATLPGDGGVSEIILSGG 176

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           DPL+L++  L ++L  +  +  +  +R H+R+PI+ P RI+  L+  L        + IH
Sbjct: 177 DPLMLNNPVLDELLTLIAELPQISKVRLHTRLPIMLPDRIDQGLLDLLSNRPFKTIMVIH 236

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
           ANH  E       A++RL     ++L+Q+VLLKG+NDD   LA L     E  + PYYLH
Sbjct: 237 ANHGAELDASVEKALARLRPVVHMMLNQTVLLKGVNDDSSTLAALSERLFECGVTPYYLH 296

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             D   G +HF    E    ++ +L+ K+ G   P  + ++PG   K  I
Sbjct: 297 QLDKVQGAAHFDCGDERLSSLMQALRAKLPGYLVPRLVREIPGAPSKTPI 346


>gi|225849592|ref|YP_002729826.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1]
 gi|225646452|gb|ACO04638.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1]
          Length = 438

 Score =  320 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 83/388 (21%), Positives = 158/388 (40%), Gaps = 50/388 (12%)

Query: 1   MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIA 57
           M+ R  T+ + + +      + ++Q  +I+ +   +   +   + + LIN  +P NDPI 
Sbjct: 1   MRYRSYTVKNFRTIPQVEKYLTEKQKFDIEVVGQVFPFKVNNYVIDQLINWEDPLNDPIF 60

Query: 58  RQFIPQKE--------------------------------ELNILPEEREDPIGDNNHSP 85
           R   PQK+                                ELN  P  ++  + + +   
Sbjct: 61  RLTFPQKDMLFPEHYELIARLLKNGEPQEKIREEANRIRMELNPHPAGQKYNVPEVDGIK 120

Query: 86  LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G  H+Y + IL        C  YC FCFR            + K+ +  + YI+   +
Sbjct: 121 LHGAQHKYKETILFFPKQGQTCHAYCSFCFRWPQFVGINELKFAMKEVDVLIEYIKRNPE 180

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINP------- 194
           I +++FTGGDPLI+    L+  ++ +    I H++ +R  ++     P R          
Sbjct: 181 ITDILFTGGDPLIMKTSVLKSYIQPVLEANIPHLKTIRIGTKSLGFWPYRFTEDEDAQEL 240

Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
            +L + + + G  +    H NH  E  ++    A+ ++   G ++ +QS +L+ IND  E
Sbjct: 241 LDLFRQIVDRGYHLAFMAHFNHYKELRTDVVREAVDKILETGAVIRTQSPVLRHINDSSE 300

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           + A + +  V + + PYY+          +F + +     I     +K SGL +      
Sbjct: 301 VWATMWKEQVSMGMIPYYMFMARDTGAQHYFGVPLVRAWNIFRDAYKKTSGLARTVKGPS 360

Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDH 340
           +    GKV+I    + ++      + D 
Sbjct: 361 MSATPGKVRIL--GVSEIFGEKVMVLDF 386


>gi|189346964|ref|YP_001943493.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM
           245]
 gi|189341111|gb|ACD90514.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM
           245]
          Length = 323

 Score =  320 bits (822), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 106/310 (34%), Positives = 166/310 (53%), Gaps = 7/310 (2%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61
           +L+H  +T+ + L     +   + + I        + +T   A L++  NP+DP+ +  I
Sbjct: 5   RLKHDLITTQEQLAEYVTLTDAEKEGICRCRPIMPMKITRHYAELLDRDNPDDPLRKLAI 64

Query: 62  PQKEELNILPEEREDPIG--DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
           P  EEL   P++    I   +  + P++GI+HRYP ++LL     C  +CRFCFR E V 
Sbjct: 65  PSVEELVRYPDDEAVDIHRDEAKYQPVEGIIHRYPGKVLLMYTTACFSHCRFCFRSEKV- 123

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
               + L  +  + A+ Y+++   I +VIFTGGDP+  + +RL+  L  +R I HV+I+R
Sbjct: 124 ---ASTLDGRRLDKAIEYLRKNESIRDVIFTGGDPMHGNPERLEHALYEVRSIPHVEIIR 180

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             +R PI  P+    ELI+ L    KP+ +     HP E S+E  + + RL++AGI+LL 
Sbjct: 181 ITTRAPIFAPEIFTDELIRMLSWF-KPLIMITSFIHPRELSDEVCSVLDRLSDAGIMLLQ 239

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           Q  +LKGINDD + L  L    V+ R  PYY     ++ G  HF L  E  +K++  L+ 
Sbjct: 240 QGPILKGINDDVDTLRTLYEKLVQHRTMPYYATWGIVSPGNRHFTLDGESARKLIRQLEN 299

Query: 300 KISGLCQPFY 309
             SG C P  
Sbjct: 300 TTSGFCIPHL 309


>gi|254427342|ref|ZP_05041049.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881]
 gi|196193511|gb|EDX88470.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881]
          Length = 463

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 90/391 (23%), Positives = 162/391 (41%), Gaps = 48/391 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + +  T      +     +  E    +  ++N     +   + N LIN  N PNDPI + 
Sbjct: 34  RFKVYTARQLDKIEPLKRLDDETRFAMDVVANVLPFRVNEYVINELINWDNVPNDPIYQL 93

Query: 60  FIPQKEE-------------------------------LNILP-EEREDPIGDNNHSPLK 87
             PQK                                 LN  P  + E  + + +   + 
Sbjct: 94  TFPQKGMLAPEHFDKVAEAMRGGDKAEIKATIAEVREALNPHPAGQMEHNMPEVDGEKID 153

Query: 88  GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           G+ H+Y + +L       VC  YC FCFR           +++K+      YIQ   +I 
Sbjct: 154 GVQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKIATKEAGQLKKYIQAHPEIS 213

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELI 197
           +V+ TGGDPL++  K L+  ++ L  ++ ++ +R  S+     PQR+          +L 
Sbjct: 214 DVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALTFWPQRVVSDADAQDLLDLF 273

Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
           + +  +GK + +  H NH  E  ++ A  A+ R+   G ++ +Q  LL  IND+ +  A 
Sbjct: 274 EEVIASGKHLALMAHYNHWQELETDIAREAVKRVRATGAVIRAQGPLLAHINDNADDWAR 333

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L +T VEL I PYY+          +F + + +  +I     +++SG+ +      +   
Sbjct: 334 LWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWEIYRDAMKQVSGIARTARGPSMSSH 393

Query: 317 YGKVKIDTHNIKKV-GNGSYCITDHHNIVHD 346
            GKV+I    + ++ G   + +       HD
Sbjct: 394 PGKVEI--QGVTEINGEKVFALRFIQGRNHD 422


>gi|332297913|ref|YP_004439835.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense
           DSM 12168]
 gi|332181016|gb|AEE16704.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense
           DSM 12168]
          Length = 357

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 116/337 (34%), Positives = 181/337 (53%), Gaps = 29/337 (8%)

Query: 28  IKEISNHYSIA------LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81
           +K++     ++      L+P  A           + RQ++P  EE N+LP E  DP+G +
Sbjct: 29  LKKVLERLYVSGQRDGDLSPFYA-----------LRRQYVPSIEEKNVLPCELSDPLGAH 77

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
            +     +VH+Y +R+LL     C  YCR CFR     S+K   ++  +   A AY+   
Sbjct: 78  RYQITPRLVHQYKNRVLLLTTARCFAYCRHCFR-RTYTSRKQGFITDAECGEACAYLSSH 136

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
            ++ E++F+GGDPL  S+  L+++++ +R  +   ++R  +R PI +P+R + ELI   K
Sbjct: 137 PEVQEILFSGGDPLTASNDALRQLIRRVRRARPGILIRICTRAPIAEPERFDSELIALFK 196

Query: 202 EAGKPVYIAIHANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
           E   P+++  H NHP E S     E+  A+S L +AGI + SQ+VLL+G+ND   +LA L
Sbjct: 197 E-NAPLWVIPHVNHPAEISNRFSPESYRALSGLVSAGIPVQSQTVLLRGVNDSVPVLAQL 255

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
                 + IKP YL   DLA GTSH R+ I EG K+   L+ ++SGL  P Y +DLPGG 
Sbjct: 256 FHELTCMGIKPGYLFQGDLAPGTSHLRVPIREGVKLYERLRGELSGLSTPVYAVDLPGGG 315

Query: 318 GKV---KIDTHNIK---KVGNGSYCITDHHNIVHDYP 348
           GK+   ++D   ++         Y  TD +     YP
Sbjct: 316 GKINLLQLDPELLRTGVSQNGNDYLFTDANGNGWTYP 352


>gi|320537569|ref|ZP_08037507.1| KamA family protein [Treponema phagedenis F0421]
 gi|320145571|gb|EFW37249.1| KamA family protein [Treponema phagedenis F0421]
          Length = 342

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 9/331 (2%)

Query: 25  IDEIKEISNHYSIALTPVIANLINPHNPNDP--IARQFIPQKEELNILPEEREDPIGDNN 82
               + I      A++P    LI      D   + RQ    + E   LP E  DP+G++ 
Sbjct: 13  ESAAESIKLRLPEAVSPAFIRLIEEAEEADAKALRRQVFAAETEKISLPYESADPLGESR 72

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           +     +VH+Y +R+L+     C  YCR+CFRR     ++G +  + + E    Y+++  
Sbjct: 73  YCVTPFLVHQYTNRVLMLTSGRCLSYCRYCFRRGFTARRQGWIPDT-EIEKITDYLKQNP 131

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            I E++ +GGDP+  +  +L+ +LK LR      ++R  +R PI  P+    EL+Q LK 
Sbjct: 132 DIKEILVSGGDPMSGTLGQLEALLKRLRQTSPELLIRLCTRAPIFAPELFTEELLQLLK- 190

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           + KP++I  H NHP E   E   AI    NAG+ + SQSVLL+G+N+  E L  L  T V
Sbjct: 191 SMKPLWIIPHINHPAELGFEQKKAIDSCINAGLPMQSQSVLLRGVNNSVETLCALFHTLV 250

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            + +KP YL   DLA GT+ FR+ + +   I   L++K+SGL  P + +DLPGG GK  +
Sbjct: 251 CMGVKPGYLFQMDLAPGTAEFRVPLSQALGIWRELRKKLSGLSLPQFAVDLPGGGGKFPL 310

Query: 323 DT-----HNIKKVGNGSYCITDHHNIVHDYP 348
                    +KK    S+        V+ YP
Sbjct: 311 SILALYDTIVKKDDADSFSALGLDGKVYTYP 341


>gi|152990665|ref|YP_001356387.1| hypothetical protein NIS_0919 [Nitratiruptor sp. SB155-2]
 gi|151422526|dbj|BAF70030.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
          Length = 425

 Score =  319 bits (819), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 87/386 (22%), Positives = 154/386 (39%), Gaps = 49/386 (12%)

Query: 1   MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIA 57
           M+ R     S + +      +  E I+ I+  +  +   +   + + LI+  N  NDPI 
Sbjct: 1   MEYRAYNAKSFKKIPQIQKYLSHEDIENIEIAALVFPFKVNNYLIDKLIDWENYQNDPIF 60

Query: 58  RQFIPQKEE-------------------------------LNILPEEREDPIGDNNHSPL 86
           R   P K+                                +N  P +++  +   N   L
Sbjct: 61  RLVFPHKDMLLEQDFERLKALYHKGDQKALSETVYEIRMRMNPHPADQKSNVPTINDKEL 120

Query: 87  KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G  H+Y + IL        C  YC FCFR            + K+ +  + YI+    I
Sbjct: 121 TGSQHKYKETILFFPKQGQTCHAYCSFCFRWPQFTGMNELKFAMKEVDLLIEYIKAHPTI 180

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195
            ++IFTGGDPLI+S K L+  ++ +    I H+Q +RF ++     P R   +       
Sbjct: 181 TDLIFTGGDPLIMSTKLLRSYIEPILKADIPHLQNIRFGTKTLGFWPYRFLTDSDADDLL 240

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
            L + + E G  +    H NH  E  ++E   A+ R+   G I+ +Q+ +L+ IND  E+
Sbjct: 241 KLFEEIVEHGYHLAFMAHFNHYRELQTDEVEKAVKRIQQTGAIIRTQAPILRHINDSSEV 300

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
              + R  V + + PYY+          +F + + E  KI       +SGL +      +
Sbjct: 301 WEKMWRKQVHMGMVPYYMFIARDTGAQHYFGVPLVEAWKIFKDAISNVSGLARTVRGPSM 360

Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITD 339
               GK+ +    + ++      + +
Sbjct: 361 SAAPGKIAVS--GVSEINKEKVIVLN 384


>gi|301166000|emb|CBW25574.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 340

 Score =  318 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 130/351 (37%), Positives = 190/351 (54%), Gaps = 19/351 (5%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q  ++ ++ +   L       + Q  ++      + + +    A  I     + P+A Q
Sbjct: 4   WQSEYRDSIKTHAALEEFF---EAQFPKVD-----FPLLIPRKFATHIKKAGLDSPLANQ 55

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
           F+PQ  E N L  E  DPIGD+N SPL  IVHRY +RIL     VCPV CR+CFR+  +G
Sbjct: 56  FLPQVSE-NDLGGES-DPIGDHNQSPLAQIVHRYENRILFFPTQVCPVICRYCFRKNELG 113

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +         + E  L Y+++ S+I E+IF+GGDPLILS +R++  L   + I H++ +R
Sbjct: 114 TNDELF--KANFEKVLEYLKQHSEINEIIFSGGDPLILSDERIEFYLNEFKKIPHIKFIR 171

Query: 180 FHSRVPIVDPQRINPELIQC---LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           FH+R PI+ P RI     +     K+    +   IH NH  EF+EE   A+S L      
Sbjct: 172 FHTRTPIILPSRITENFCKIIENFKKDFLQINFIIHVNHSQEFNEENKVALSLLHAHCSN 231

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           LLSQSVLLKG+N+  + L  L+   ++L I+PYYLHHPD   G  HF LT+EEG+ + A+
Sbjct: 232 LLSQSVLLKGVNNSKQALLKLIDELIKLNIRPYYLHHPDKVKGGLHFMLTLEEGRNLYAT 291

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           L+  + G   P YI+D+PGG GKV   +    +  N S  + +       Y
Sbjct: 292 LRNHLPGWALPQYIIDIPGGEGKV---SAYNPETYNFSGHLINRKGTKVPY 339


>gi|148244460|ref|YP_001219154.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326287|dbj|BAF61430.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA]
          Length = 314

 Score =  318 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 92/279 (32%), Positives = 149/279 (53%), Gaps = 6/279 (2%)

Query: 34  HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93
            + I +    A LI+  N +DP+ +Q I  K  L+        P+ D  +SP+ G++H+Y
Sbjct: 32  TFPIKIPMEFARLIDKRNKDDPLLKQVITPKN-LSKSTNFSLSPLEDEKYSPVAGLIHKY 90

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P+R+LL    VC ++C+FCFR+     +   + +  + +    YI    +I EVI +GGD
Sbjct: 91  PNRVLLIASQVCAIHCQFCFRQNFNYVEHDAISNWVEIQ---NYIINDVKINEVILSGGD 147

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL LS  +L  ++  + +I+H++ LR H+R  +V+P RI  +L++   ++   + I +H 
Sbjct: 148 PLSLSDDKLSTLIDNIAHIEHIKTLRVHTRNAVVEPSRITRKLVEIFNQSRLNIVIVLHI 207

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NH  E S +    I  L    + LLSQSVLL+G+ND  E+L  L  +  +L I PYYLH 
Sbjct: 208 NHAQELSVQFAQKIIELTR--VTLLSQSVLLRGVNDSIEVLTELCLSLFDLGILPYYLHM 265

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
            D   G   F +  +   ++   LK  +SG   P  + D
Sbjct: 266 LDKVQGAQDFLVKDDYAIQLHQQLKSNLSGYLVPKLVRD 304


>gi|325475292|gb|EGC78477.1| hypothetical protein HMPREF9353_00492 [Treponema denticola F0402]
          Length = 338

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 170/340 (50%), Gaps = 14/340 (4%)

Query: 15  YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND--PIARQFIPQKEELNILPE 72
            N       +  + ++      + ++     LI    P D   +  Q  P   E  +   
Sbjct: 4   KNWREFSAAETADFEQ-----PVLISSAFQKLIEEAEPEDSKALRLQVEPSACEKTVCSY 58

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           E  DP+G+  +     +VH+Y +R+LL     C  YCR+CFRR +    + + +   + +
Sbjct: 59  ETADPLGEQKYCITPYLVHQYENRVLLITTGKCLSYCRYCFRRGLTSRSQ-SYIGDGELK 117

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
               YI++  Q+ E++ +GGDPL    K+L+KVL  LR IK   ++R  +R PI  P+  
Sbjct: 118 EVTDYIKKMPQVTEILVSGGDPLSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELF 177

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
             EL+  LK+  KP+++  H NHP E   E   A++    AGI + SQ+VLLKG+ND+ +
Sbjct: 178 TEELLHLLKKT-KPLWLIPHINHPAELGAEQTNALNACIEAGIPIQSQTVLLKGVNDNEK 236

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
            L  L      + IKP YL   D AAGTSHFR+ ++E   +    + K+SGL +P +  D
Sbjct: 237 TLIKLFHKLTCMGIKPGYLFQLDPAAGTSHFRVPLKEALDLWERAEPKLSGLSRPQFAAD 296

Query: 313 LPGGYGKVKIDT-----HNIKKVGNGSYCITDHHNIVHDY 347
           LPGG GK  +         I++  + S+       ++H Y
Sbjct: 297 LPGGGGKFSLSALIYSKKIIEQKEDSSFSALGADGVIHKY 336


>gi|46445864|ref|YP_007229.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46399505|emb|CAF22954.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 347

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 104/325 (32%), Positives = 166/325 (51%), Gaps = 7/325 (2%)

Query: 1   MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            +L + K  T+ + L +   +  EQ  ++ +    ++I +   +A  +   +  DP+ +Q
Sbjct: 27  WRLIQRKNFTNLKILADFLALNFEQRKQLLD-KPTFAINVPYRLAQKMTKGSLEDPLVKQ 85

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
           F+P K E        +DP+GD        ++H+Y  R+LL     C ++CR+CFR+    
Sbjct: 86  FLPFKSEFENHNLFVQDPVGDEQCRRTAQLLHKYRGRVLLVCTSACAMHCRYCFRQNFSY 145

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                    +     L  I++ S I EVI +GGDPL LS+  L K+ + L  I H++ +R
Sbjct: 146 QSHDKTFLKE-----LDLIRQDSSIHEVILSGGDPLSLSNDILAKLFEELNGISHLKRIR 200

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
           FH+R PI  P+RI+   +  ++   K ++  IH NHP E  E+    +  L   G +LL+
Sbjct: 201 FHTRFPIGIPERIDKGFLNIIENCPKQIFFVIHCNHPLELDEDIFERLKALHLRGCVLLN 260

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLKG+ND  E+L  L     +  I PYYLH  D   G SHF L  +EG  ++  L +
Sbjct: 261 QSVLLKGVNDRIEVLEELCELLSDHGIIPYYLHQLDRVKGASHFELGEKEGAALIQELSK 320

Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324
           ++SG   P Y+ ++ G   K  I  
Sbjct: 321 RLSGYAIPRYVREIAGEAHKTPIQL 345


>gi|110834678|ref|YP_693537.1| L-lysine 2,3-aminomutase [Alcanivorax borkumensis SK2]
 gi|110647789|emb|CAL17265.1| L-lysine 2,3-aminomutase, putative [Alcanivorax borkumensis SK2]
          Length = 462

 Score =  318 bits (816), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 92/391 (23%), Positives = 161/391 (41%), Gaps = 48/391 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + +  T      +     +  E    +  ++N     +   + N LIN  N PNDPI + 
Sbjct: 34  RFKVYTARQLDKIEPLQRLDDETRFAMDVVANVLPFRVNEYVINELINWDNVPNDPIYQL 93

Query: 60  FIPQKEE-------------------------------LNILP-EEREDPIGDNNHSPLK 87
             PQK                                 LN  P  + E  I + +   ++
Sbjct: 94  TFPQKGMLAPEHFDKVADAMRGGDKTAIKTAIAEVREALNPHPAGQMEHNIPEVDGEKIE 153

Query: 88  GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           GI H+Y + +L       VC  YC FCFR           +++K+      YIQ   +I 
Sbjct: 154 GIQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKIATKEAGQLKKYIQAHPEIS 213

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LI 197
           +V+ TGGDPL++  K L+  ++ L  ++ ++ +R  S+     PQR+  +        L 
Sbjct: 214 DVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALTFWPQRVVSDADAKDLLHLF 273

Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
           + +  +GK + +  H NH  E  +  A  A+ R+   G ++ +Q  LL  IND+ +  A 
Sbjct: 274 EEVIASGKHLALMAHYNHWQELQTNIAREAVKRVRATGAVIRAQGPLLAHINDNADDWAR 333

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L +T VEL I PYY+          +F + + +   I     +++SG+ +      +   
Sbjct: 334 LWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWNIYRDAMKQVSGIARTARGPSMSSH 393

Query: 317 YGKVKIDTHNIKKV-GNGSYCITDHHNIVHD 346
            GKV+I    + ++ G   + +       HD
Sbjct: 394 PGKVEI--QGVTEINGEKVFALRFIQGRNHD 422


>gi|108759631|ref|YP_634392.1| hypothetical protein MXAN_6263 [Myxococcus xanthus DK 1622]
 gi|108463511|gb|ABF88696.1| conserved hypothetical protein [Myxococcus xanthus DK 1622]
          Length = 442

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 81/369 (21%), Positives = 149/369 (40%), Gaps = 47/369 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + R  T     +L     +  ++   ++ +++         + + LI+    P DPI R 
Sbjct: 16  RYRAYTTRHLDELTTRAGLSADERLAVQAVAHVLPFRTNSYVVDELIDWAAAPADPIYRL 75

Query: 60  FIPQKEEL--------------------------NILPEEREDPIGD--------NNHSP 85
             PQ + L                           I       P G          N  P
Sbjct: 76  VFPQADMLPTEDVARMVDLLSSGASPLELNAAANEIRARLNPHPAGQMQLNVPKLANEEP 135

Query: 86  LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           + G+ H+Y + +L+       C  YC +CFR            +S++ E  + YI+   +
Sbjct: 136 VPGLQHKYKETVLIFPKQGQTCHAYCTYCFRWAQFVGDADLKFASREIEPLVNYIRAHPE 195

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-------- 195
           +  V+FTGGDP+I++   L K ++ L  I+H++ +R  ++     PQR   +        
Sbjct: 196 VTNVLFTGGDPMIMTEAVLAKYIEPLLDIEHLEAIRIGTKALAYWPQRFVTDSDADDILR 255

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           L + +  +GK +    H +HP E   E    A+ R+   G ++ +Q+ L++ IND P   
Sbjct: 256 LFEKVVASGKSLAFMAHFSHPNEMVPEIVQEAVRRIRGTGAVIRTQAPLIRTINDTPGTW 315

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
            ++ RT +   + PYY+          +F + + E   I  +  + +SGL +      + 
Sbjct: 316 ESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYDIFRNAFQSVSGLARTVRGPSMS 375

Query: 315 GGYGKVKID 323
              GKV +D
Sbjct: 376 ATPGKVCVD 384


>gi|308049116|ref|YP_003912682.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
 gi|307631306|gb|ADN75608.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799]
          Length = 452

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 87/371 (23%), Positives = 150/371 (40%), Gaps = 50/371 (13%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + +         +   N + +    E+K +++     +   +AN LI+  N P DPI + 
Sbjct: 17  RFKVYQQRQLDKIELVNRLPEALKFEMKVVASVLPFRVNEYVANDLIDWDNLPADPIFQL 76

Query: 60  FIPQK--------------------------------EELNILP-EEREDPIGDNNHSPL 86
             PQK                                 E+N  P  +    + + +   L
Sbjct: 77  SFPQKGMLAPEAFERMATLLRQNPSPQQVFELGQTLRAEMNPHPAGQMSMNVPELDGEKL 136

Query: 87  KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y +  L        C  YC FCFR       K    +S D +    Y+    +I
Sbjct: 137 PGMQHKYKETALFFPAQGQYCHSYCTFCFRWAQFVG-KAMRFNSNDADTLHRYLAAHPEI 195

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPE------ 195
            +++ TGGDP+++   ++ + ++ L       HVQ +RF ++     P R   +      
Sbjct: 196 SDLLITGGDPMVMKTTKIAQYVEPLIDNPDTEHVQTVRFGTKALTFWPYRFVTDDDADEL 255

Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
             L + L +AGK V I  H NH  E  +     A+ R+   G  + +Q+ LLK IND+ +
Sbjct: 256 LALFRRLVKAGKHVSIMAHLNHWQEMETPIFEEAVRRIRATGANIRAQAPLLKNINDNAD 315

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
             A + +  V+L I PYY+          +F + + +  +I      K+SGL +      
Sbjct: 316 DWARMWQKQVKLGIIPYYMFVERDTGPKRYFEVPLYQAYEIYRDAISKVSGLARTARGPS 375

Query: 313 LPGGYGKVKID 323
           +  G GKV+I 
Sbjct: 376 MSAGPGKVEIQ 386


>gi|42525588|ref|NP_970686.1| hypothetical protein TDE0069 [Treponema denticola ATCC 35405]
 gi|41815599|gb|AAS10567.1| conserved hypothetical protein TIGR00238 [Treponema denticola ATCC
           35405]
          Length = 338

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 107/340 (31%), Positives = 173/340 (50%), Gaps = 14/340 (4%)

Query: 15  YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND--PIARQFIPQKEELNILPE 72
            N       +  + ++      + ++     LI    P D   +  Q  P   E  +   
Sbjct: 4   KNWREFSAAETADFEQ-----PVLISSAFQKLIEESEPEDSNALLLQVEPSACEKTVCSY 58

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           E  DP+G+  +     +VH+Y +R+LL     C  YCR+CFRR +    + + +   + +
Sbjct: 59  ETADPLGEQKYCITPYLVHQYENRVLLITTGKCLSYCRYCFRRGLTARSQ-SYIGDGELK 117

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
           A   YI++  Q+ E++ +GGDPL    K+L+KVL  LR IK   ++R  +R PI  P+  
Sbjct: 118 AVTDYIKKMPQVTEILVSGGDPLSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELF 177

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
             EL+  LK+  KP+++  H NHP E  +E   A++    AGI + SQ+VLLKG+ND+ +
Sbjct: 178 TEELLHLLKKT-KPLWLIPHINHPAELGKEQTNALNACIEAGIPIQSQTVLLKGVNDNEK 236

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
            L  L      + IKP YL   D AAGTSHFR+ ++E   +   ++ K+SGL +P + +D
Sbjct: 237 TLIKLFHKLTCMGIKPGYLFQLDPAAGTSHFRVPLKEALDLWERVEPKLSGLSRPQFAVD 296

Query: 313 LPGGYGKVKIDT-----HNIKKVGNGSYCITDHHNIVHDY 347
           LP G GK  +         I++  + S+       ++H Y
Sbjct: 297 LPEGGGKFSLSALIYSKKIIEQKEDSSFSALGADGVIHKY 336


>gi|30249230|ref|NP_841300.1| hypothetical protein NE1247 [Nitrosomonas europaea ATCC 19718]
 gi|30180549|emb|CAD85158.1| DUF160 [Nitrosomonas europaea ATCC 19718]
          Length = 452

 Score =  314 bits (805), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 91/390 (23%), Positives = 161/390 (41%), Gaps = 49/390 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + +  T      +       KEQ  E+  ++N     +   + + LI+ +N P DP+ + 
Sbjct: 20  RFQVYTERQLDKIRPLERFTKEQRFEMHVVANVLPFRVNQYVIDELIDWNNIPADPVFQL 79

Query: 60  FIPQKEELNILPEER--------------------------EDPIGDNNHS-------PL 86
             PQ+  L     ER                            P G    +       PL
Sbjct: 80  TFPQRNMLEPEDFERMAEALRRDAQRSEIQAIAVDIRSKLNPHPAGQQEMNVPVFHGEPL 139

Query: 87  KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G  H+Y + +L       VC  YC FCFR       K    +S +      Y+     +
Sbjct: 140 PGTQHKYRETVLFFPSQGQVCHSYCTFCFRWAQFIGDKELRFASNEAGNLHKYLAGHKDV 199

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQR-INPE------ 195
            +++ TGGDP+++    L+  L+ +    ++HVQ +R  ++     PQR +  E      
Sbjct: 200 TDLLMTGGDPMVMKTHHLKAYLEAMLRPALEHVQNIRIGTKSLTFWPQRYVTDEDAHELL 259

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
            L++ L +AGK V +  H NH  E  +     A+ R+  AG+++ +Q+ +++ INDDP +
Sbjct: 260 ALLERLVKAGKHVALMAHFNHWREMDTPIVREAVRRIRAAGVVIRAQAPIVRNINDDPAV 319

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A + RT V + I PYY+          +F + +E   +I     +++SGL +      +
Sbjct: 320 WAKMWRTQVGMGIIPYYMFVERDTGAKRYFEVPLERTYQIYREAIQQVSGLARTVRGPSM 379

Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
             G GKV+I    ++  G   + +      
Sbjct: 380 SAGPGKVEIQG-IVELNGEKIFILRFIQGR 408


>gi|319790052|ref|YP_004151685.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
           ammonificans HB-1]
 gi|317114554|gb|ADU97044.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio
           ammonificans HB-1]
          Length = 343

 Score =  313 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 104/347 (29%), Positives = 178/347 (51%), Gaps = 7/347 (2%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           + +TS + L     +   + +  + +   Y  + T   A L      +  + R  +P  E
Sbjct: 2   RVITSLEALEGLLPLSPREREAFRAVVPVYPFSTTEYYARL---AAESFAVRRMLLPSLE 58

Query: 66  ELNILPE--EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
           ELN   +     DP+ +        + HRYPDR+L+   + CPV CRFC R+     +  
Sbjct: 59  ELNPELQNLGEPDPLREERDRKAPCLTHRYPDRVLVVTTNYCPVLCRFCMRKRNW-RRPL 117

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
             +S  + +A L+Y++   Q+ +V+ +GG+PL+L  + L+++L  L+ I+ V+++R  +R
Sbjct: 118 FTISEDEVDAVLSYVRRNPQVRDVLISGGEPLLLPLELLERLLLGLKKIESVEVVRIGTR 177

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           +P+V+P  +    +  L E  + V++  H NHP E + EA  A+  L   G+ + +Q+VL
Sbjct: 178 LPVVEPSAVLRSELLSLLERAQKVWVNTHFNHPDELTAEAAEAVKALLKCGVPVNNQTVL 237

Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           LKG+ND   +L  L R    ++++PYYL H D   G  HF   I  G K++  L+ ++S 
Sbjct: 238 LKGVNDSVSVLERLFRGLQRIKVRPYYLFHCDPVEGVMHFSTPISLGLKLLEELQTRLSP 297

Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           L  P+Y +D PGGYGKV +     +K+G   Y            P +
Sbjct: 298 LALPYYAVDGPGGYGKVPMLPVRFEKLG-SVYRFRSFSGRYFTMPDR 343


>gi|56477547|ref|YP_159136.1| hypothetical protein ebA3745 [Aromatoleum aromaticum EbN1]
 gi|56313590|emb|CAI08235.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 462

 Score =  313 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 93/390 (23%), Positives = 164/390 (42%), Gaps = 50/390 (12%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
            +  T      +     + + Q  E+K +S+     +   + + LI+  N P DP+ +  
Sbjct: 24  FKVYTQRDFDQIVPLAKLSEAQRFEMKVVSSVLPFRVNQYVIDELIDWDNIPADPMFQLT 83

Query: 61  IPQK--------------------------------EELNILPEERE--DPIGDNNHSPL 86
            PQ+                                 ELN  P ++   +   D + + L
Sbjct: 84  FPQRGMLAPEHFDRIATLLEHGADKKDVDAAVDAVRHELNPHPADQMEMNMPRDEHGNRL 143

Query: 87  KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           +GI H+Y + +L        C  YC FCFR       K   ++S + E   AY++   ++
Sbjct: 144 EGIQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKELRIASSEAETLHAYLRHHCEV 203

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195
            +++FTGGDP+++  + L+  L+ L      H+Q +R  ++     P R           
Sbjct: 204 TDLLFTGGDPMVMKTRHLRDYLEPLLKPEFDHIQTIRIGTKALTFWPHRFLGADDADELI 263

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEEA-IAAISRLANAGIILLSQSVLLKGINDDPEI 253
            L++ L EAGK V +  H NH  E   EA  AA+ RL  AG+++  Q  L+  +NDDP++
Sbjct: 264 ALLERLTEAGKHVALMTHFNHWKELDTEATQAAVRRLRKAGVVIRGQGPLIAHLNDDPDV 323

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A + +T V L I PYY+         ++F + +    +I     +++SGL +      +
Sbjct: 324 WARMWKTQVRLGILPYYMFVERDTGARNYFEVPLVRAWEIYRDAMQQVSGLGRTARGPSM 383

Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
               GKV+I     +  G   + +      
Sbjct: 384 SASPGKVEIQGV-TEVAGEKVFVLRFIQGR 412


>gi|163756014|ref|ZP_02163131.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1]
 gi|161324185|gb|EDP95517.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1]
          Length = 418

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 100/382 (26%), Positives = 163/382 (42%), Gaps = 50/382 (13%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59
           + +  TL   + +   + + +EQ++EIK +S+ Y       +  NLI+ +N PNDPI R 
Sbjct: 3   KFKSYTLNKLEKIPQLSGLSEEQMEEIKIVSSIYPFKTNNYVLENLIDWNNIPNDPIFRL 62

Query: 60  FIPQKEELNILPEER-------------------------EDPIGDNNHS-------PLK 87
             P KE L     E+                           P G    +        L+
Sbjct: 63  NFPHKEMLIPEHFEQLKRVRATGTKEELKEVIYNIRMKLNPHPAGQKELNGAFLEEKKLE 122

Query: 88  GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           GI H+Y D +L        C  YC FCFR     +     + SK+ +  L Y+ E  QI 
Sbjct: 123 GIQHKYKDILLFFPSQSQTCHAYCTFCFRWPQFINDLDFKIQSKEIDPLLKYLSENPQIT 182

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LI 197
           EV+FTGGDP+I++ + L   ++ L  +  ++ +R  ++     P +   +        ++
Sbjct: 183 EVLFTGGDPMIMNSRVLDSYIEPLLKVDSIKTIRIGTKALSYWPYKFTTDEDAEGMLNVL 242

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
           + + +AGK +    H NHP E        AI +L + G ++ +QS LL+ IN+D +    
Sbjct: 243 RKITKAGKHLGFMAHFNHPKELEPPVVKEAIDKLRSIGAVIRTQSPLLRFINNDAKTWTT 302

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           +    V+L   PYY+  P       +F  T+E   K+        SGL        +   
Sbjct: 303 MWEKQVQLGCIPYYMFLPRDTGAQHYFAETLENAHKLYTEAIRNCSGLASTAKGPVMSMT 362

Query: 317 YGKVKIDTHNIKKVGNGSYCIT 338
           +GKV+I       V N SY + 
Sbjct: 363 HGKVEI-----LGVKNNSYTLR 379


>gi|56460615|ref|YP_155896.1| lysine 2,3-aminomutase related protein enzyme [Idiomarina
           loihiensis L2TR]
 gi|56179625|gb|AAV82347.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina
           loihiensis L2TR]
          Length = 448

 Score =  313 bits (803), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 92/369 (24%), Positives = 159/369 (43%), Gaps = 52/369 (14%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
            +H+ L   + L     +  +   E+K ++N     +   + N LI+  N PNDP+ +  
Sbjct: 20  YQHRQLDKIEALKK---VPDDMRFEMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLT 76

Query: 61  IPQKEELNILPEER--------------------------EDPIGDNNHS-------PLK 87
            PQK+ L     +R                            P G    +       PL 
Sbjct: 77  FPQKDMLEPSAYQRMADLMSGKHTTNEVFDLATQLRDEMNPHPAGQMQMNVPHVDGEPLP 136

Query: 88  GIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           G+ H+Y + +L        C  YC FCFR       K T  +S D +    Y+ +  ++ 
Sbjct: 137 GMQHKYRETVLFFPAQGQYCHSYCTFCFRWAQFVG-KATRFNSNDADQLHRYLAQHKEVT 195

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195
           +++ TGGDP+++  ++L   L+ L     +H++ +R  ++     P R   +        
Sbjct: 196 DLLVTGGDPMVMRTRKLAHYLEGLLQPEFEHIKTIRIGTKSLTFWPYRFITDPDADDLLR 255

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEIL 254
           L++ L + GK V I  H NHP E   E    AI RL   G+ +  Q+ LLK INDDP++ 
Sbjct: 256 LLERLVDGGKHVSIMAHLNHPNELRTEVCQEAIRRLRATGVQIRCQAPLLKHINDDPDVW 315

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           A++    V+L + PYY+          +F + +E   +I     +++SG+ +      + 
Sbjct: 316 ASMWEKQVQLGLIPYYMFVERDTGAKRYFEVPLERTWEIFQKAYQQVSGIARTVRGPSMS 375

Query: 315 GGYGKVKID 323
            G GKV++ 
Sbjct: 376 AGPGKVEVQ 384


>gi|149377740|ref|ZP_01895474.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893]
 gi|149357966|gb|EDM46454.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893]
          Length = 241

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 88/242 (36%), Positives = 133/242 (54%), Gaps = 2/242 (0%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            P  G++ +Y  R LL +   C + CR+CFRR      +   LS +D   A+  + E ++
Sbjct: 1   MPATGLIRKYDSRALLMVTGQCAINCRYCFRRHFPY--EDHRLSPEDRTQAIKTLSEDTR 58

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           + EVIF+GGDPL+ + + L    + L  I H++ LR H+R+P+V PQR+   LI+ L  +
Sbjct: 59  LNEVIFSGGDPLVANDRLLSAWAEALAAIPHIRRLRVHTRLPVVIPQRVTDSLIKWLSGS 118

Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
                + IH NHP E   +   A+ RL  AGI LL+QSV+LKG+ND+  +LA L     E
Sbjct: 119 RLQAVVVIHVNHPAELDADTQRALERLKAAGITLLNQSVVLKGVNDNARVLAELSERLFE 178

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             + PYYLH  D  AG  HF ++  + + +V  L   + G   P  + ++PG  GK  +D
Sbjct: 179 CGVLPYYLHAFDPVAGAHHFEVSDNKARDLVRQLITLLPGFLVPRLVREIPGQSGKTPLD 238

Query: 324 TH 325
             
Sbjct: 239 LF 240


>gi|85711269|ref|ZP_01042328.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica
           OS145]
 gi|85694770|gb|EAQ32709.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica
           OS145]
          Length = 457

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 88/369 (23%), Positives = 158/369 (42%), Gaps = 52/369 (14%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
            +H+ L   + L     +  +   E+K ++N     +   + N LI+  N PNDP+ +  
Sbjct: 29  YQHRQLDKIEALKR---VPDDIRFEMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLT 85

Query: 61  IPQKE--------------------------------ELNILP-EEREDPIGDNNHSPLK 87
            PQK+                                E+N  P  + +  +   +  PL 
Sbjct: 86  FPQKDMLDPSAFQRMADLMSGKHTTNEVFDLATQLRQEMNPHPAGQMQMNVPHVDGEPLP 145

Query: 88  GIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           G+ H+Y + +L        C  YC FCFR       K T  +S D +    Y+ +  ++ 
Sbjct: 146 GMQHKYRETVLFFPAQGQYCHSYCTFCFRWAQFVG-KATRFNSNDADQLHRYLAQHKEVT 204

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195
           +++ TGGDP+++  ++L+  L+ L      H++ +R  ++     P R   +        
Sbjct: 205 DLLVTGGDPMVMRTRKLKHYLEGLLQPEFDHIKTIRIGTKALTFWPYRFITDPDADELMR 264

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEIL 254
           L++ L   GK V I  H NH  E   E    AI RL   G  +  Q+ LL+ INDDP++ 
Sbjct: 265 LLEKLVRGGKHVSIMAHLNHHNELRTEVCEEAIRRLRATGAQIRCQAPLLRHINDDPKVW 324

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           A++    V+L + PYY+          +F + +E   ++     +++SG+ +      + 
Sbjct: 325 ADMWEREVQLGMIPYYMFVERDTGAKRYFEVPLERTWEVFQQAYQQVSGIARTVRGPSMS 384

Query: 315 GGYGKVKID 323
            G GKV++ 
Sbjct: 385 AGPGKVEVQ 393


>gi|313680789|ref|YP_004058528.1| l-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977]
 gi|313153504|gb|ADR37355.1| L-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977]
          Length = 432

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 147/361 (40%), Gaps = 45/361 (12%)

Query: 7   TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQFIPQK 64
           TL +         + +    E++  +        P + + LI+    P DPI +   PQ+
Sbjct: 16  TLKNIHRHPAYRRLPESLRRELEVAAQVLPFRTNPYVLDELIDWDRAPEDPIFQLVFPQR 75

Query: 65  EE-------------------------------LNILP-EEREDPIGDNNHSPLKGIVHR 92
                                            +N  P  +    + + +   L G+ H+
Sbjct: 76  GMLDSETYARVEAALTSGDREALVEAVWNARRAMNPHPAGQLTHNVPELDGRKLDGLQHK 135

Query: 93  YPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           Y + +L        C  YC +CFR       +     S   +  + Y++   ++ +V+ T
Sbjct: 136 YAETVLFFPAGGQTCHAYCTYCFRWAQFVGDRELKFESSQVDDLVRYLRAHPEVTDVLVT 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKE 202
           GGDP+++  + L + L+ L  ++ ++ +R  S+     P R   +        L + +  
Sbjct: 196 GGDPMVMKTRLLARYLEPLLEVETLRTIRIGSKSLAYWPMRFTTDPDAAEVLRLFERVAA 255

Query: 203 AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           AGK +    H +HP E  +E+  AAI  L   G ++ +Q+ L++ +NDD ++ A   R  
Sbjct: 256 AGKQLAFMAHFSHPRELETEQVQAAIQNLLATGAVVRTQAPLIRHVNDDADVWAEKWRRE 315

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
           V L + PYY+          +F + + E Q+I A    ++SGL +      +    GKV+
Sbjct: 316 VRLGLIPYYMFVERDTGPKRYFEVPLAEAQRIFADAYRQVSGLARTVRGPSMSAFPGKVR 375

Query: 322 I 322
           +
Sbjct: 376 V 376


>gi|111025433|ref|YP_707853.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
 gi|110824412|gb|ABG99695.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
          Length = 442

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 92/388 (23%), Positives = 167/388 (43%), Gaps = 51/388 (13%)

Query: 1   MQLRHKTLTSAQ--DLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINP-HNPNDPI 56
           M+ R +T    Q  DL   +   +++  E++ ++N     +   + + LI+    P+DPI
Sbjct: 1   MKNRMRTFRGVQLADLPQLDQFTEQERHEMRVVANLLPFRVNNYVLDELIDWSSAPDDPI 60

Query: 57  ARQFIPQKEE--------------------------------LNILP-EEREDPIGDNNH 83
            R   P +E                                 LN  P  +RE  +   + 
Sbjct: 61  FRMTFPAREMVPPRIYDLVSDALSNGVDRKQLQAIAQKCRQDLNPHPSGQREHNVPLLDG 120

Query: 84  SPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
            P+ G+ H+Y   +L+       C  YC +CFR            ++      + Y++  
Sbjct: 121 EPVAGLQHKYRQTLLVFPSQGQTCHSYCSYCFRWAQFVGDADLKFAAPGPGRMIDYLRGH 180

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----P 194
            ++ +V+ TGGDPLI+S   L + +  L    ++HV  +R  ++  +  P R+       
Sbjct: 181 REVTDVLLTGGDPLIMSTPVLARWVTPLLAPDLEHVTNIRIGTKALVQWPYRVTSGPDAD 240

Query: 195 ELIQCLK---EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
           EL++ ++    AGK V I +H +HP E   EA  AA++RL +AG ++ +Q+ +++ +ND 
Sbjct: 241 ELLRLIEACTAAGKSVAIMLHVSHPRELENEAATAAVARLRSAGAVVRAQAPIIRHVNDS 300

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
           P+  A + R  V L I+PYY         +S F + +     I    +  +SGL +    
Sbjct: 301 PQAWATMWRHMVRLGIQPYYTFVERDTGASSFFEVPLARALTIYQEAQRVVSGLARTARG 360

Query: 311 LDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
             +    GK+ ID   +   G   + + 
Sbjct: 361 PVMSATPGKIAIDGETVVN-GERLFVLR 387


>gi|291301955|ref|YP_003513233.1| hypothetical protein Snas_4495 [Stackebrandtia nassauensis DSM
           44728]
 gi|290571175|gb|ADD44140.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM
           44728]
          Length = 432

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 80/385 (20%), Positives = 158/385 (41%), Gaps = 54/385 (14%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + R  T    ++L     +  EQ    + ++          + + LI+    P+DPI R 
Sbjct: 12  RFRAYTARHLEELLTRAGLSPEQRLRARAVATVLPFRTNDYVIDELIDWDAAPDDPIYRL 71

Query: 60  FIPQKEEL--------------------------------NILPEEREDP----IGDNNH 83
             PQ++ L                                N  P  + D     +G+ + 
Sbjct: 72  VFPQEDMLPAEDVSKLAKLLDADPKGPELKAEVFAIRRRLNPHPAGQLDLNKPKLGEAD- 130

Query: 84  SPLKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
             + G+ H+YP+ +L        C  YC +CFR      +    ++S D +A + YI+  
Sbjct: 131 --IPGMQHKYPETVLFFPQQGQTCHAYCTYCFRWAQFVGESDLKMASNDIDALVGYIKAH 188

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------N 193
            +I  V+ TGGD +I+    L++ ++ L  ++ ++ +R  ++     PQR          
Sbjct: 189 PEITSVLITGGDAMIMGAPVLRRYIEPLIQLEQLESIRMGTKALAYWPQRFVTDPDADDT 248

Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPE 252
             L + + E+GK +    H +H  E +      A+ R+ + G ++ +Q+ L+K INDDP+
Sbjct: 249 LRLFEEVCESGKNLAFQAHFSHTRELAPTMLHDAVKRIRDTGAVIRTQAPLIKSINDDPQ 308

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           + +++ R    + + PYY+          +F + +     I      ++SGLC+      
Sbjct: 309 VWSDMWRKHHTMGMVPYYMFVERDTGPQEYFAVPLARAYDIFQEAYSQVSGLCRTVRGPS 368

Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCI 337
           +    GKV +D   + ++      +
Sbjct: 369 MSADPGKVAVD--GVVEINGTRVFV 391


>gi|325279772|ref|YP_004252314.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
 gi|324311581|gb|ADY32134.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712]
          Length = 442

 Score =  309 bits (793), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 89/388 (22%), Positives = 154/388 (39%), Gaps = 48/388 (12%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHNPN-DPIARQF 60
            +   LT+ +++     + KE++  I+ +           +   LI+    + DPI    
Sbjct: 5   YQAYGLTNYRNIRQITRLNKEELQAIEVVGRVLPFKTNNYVVEELIDWERIDTDPIFTLN 64

Query: 61  IPQKE--------------------------------ELNILPEEREDPIGDNNHSPLKG 88
            P++E                                ELN  P  ++  +       LKG
Sbjct: 65  FPRREMLSKKHFSVVSKLLAQEVGKEEFIAAVNAVRLELNPNPAGQDHNVPMLGDIRLKG 124

Query: 89  IVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           I H+Y + +L        C  YC FCFR            + K+T+  L Y++   Q+ +
Sbjct: 125 IQHKYRETVLFFPAQGQTCHAYCSFCFRWPQFSGMNELKFAMKETDLLLKYLRLHPQVTD 184

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------L 196
           V+FTGGDP+ +S   L   ++ L    ++H++ +R  S+     P R   +        L
Sbjct: 185 VLFTGGDPMTMSASLLSAYIEPLLQPGLEHIRTIRIGSKALAYWPYRFISDVDAAEVLRL 244

Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            + +   GK +    H NHP E  +     AI R+ N G  + +QS LL+ IND PEI  
Sbjct: 245 FEKVTATGKNLSFQAHFNHPVELSTAAVCEAIRRIRNTGAQIRTQSPLLRHINDSPEIWR 304

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            + R  V+L   PYY+          +F + +E+   I      ++SG+C+      +  
Sbjct: 305 EMWRKQVDLSCIPYYMFVARDTGAKHYFEIPLEKCWDIFRKAYSQVSGICRTVRGPSMSD 364

Query: 316 GYGKVKIDTHNIKKVGNGSYCITDHHNI 343
             GK+++      K G   + +      
Sbjct: 365 EPGKIQLLGVAEIK-GEKVFVLRFIQGR 391


>gi|194333979|ref|YP_002015839.1| radical SAM domain-containing protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194311797|gb|ACF46192.1| radical SAM domain protein [Prosthecochloris aestuarii DSM 271]
          Length = 433

 Score =  309 bits (792), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 89/382 (23%), Positives = 165/382 (43%), Gaps = 48/382 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59
           + R  T  +  +L     +  EQI  IK ++  Y   +   +A NLI+    P+DP+ R 
Sbjct: 3   KYRSYTAANIHELPQYRALSDEQIHTIKTVATVYPFRINNHVAENLIDWSAVPDDPVFRL 62

Query: 60  FIPQK-----EELNILPE---------------------EREDPIGDNNHS-------PL 86
             PQ      +E N L                       +  +P G    +        L
Sbjct: 63  SFPQAGMLQDKEFNDLSGLIRSGKDKTIIQRTARQIMLRQNPNPAGQMELNTPQLDGIAL 122

Query: 87  KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y + +L       VC  YC +CFR            ++ D    ++Y++E  ++
Sbjct: 123 HGMQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLDNLKFANHDVSRLISYLKEHPEV 182

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
            ++IFTGGDP+++S + L+K ++ L  I  ++ +R  ++     P R   +        L
Sbjct: 183 KDIIFTGGDPMVMSSQLLRKYIEPLLKIPAIRTIRIGTKSLSWWPYRFTTDTDADDILRL 242

Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            + +  AGK + I  H +HP E  +  A+ AI+R+ + G ++ SQS +++ IND+ +   
Sbjct: 243 FEKIVHAGKHLAIMAHISHPGEIENPAALDAITRIRSTGAVIRSQSPIVRYINDNAQTWE 302

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            + +  + L I PYY+          +F + + E   I  +   K+SGL +      +  
Sbjct: 303 AMWQKQLHLGIIPYYMFLERDTGPKHYFDVPLHEALNIFNTAYRKMSGLGRTVRGPSMSC 362

Query: 316 GYGKVKIDTHNIKKVGNGSYCI 337
             GK+ +   +I ++      +
Sbjct: 363 SPGKIIV--EDITEIDEKKVFV 382


>gi|171316099|ref|ZP_02905324.1| radical SAM domain protein [Burkholderia ambifaria MEX-5]
 gi|171098703|gb|EDT43497.1| radical SAM domain protein [Burkholderia ambifaria MEX-5]
          Length = 465

 Score =  308 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 87/371 (23%), Positives = 152/371 (40%), Gaps = 48/371 (12%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
            + +  T  +        L+  E  + +  +S      + P + N LI+    P+DPI R
Sbjct: 7   WKFKPYTRHTVSQSPRWQLLPSELQEAVDVVSRVLPFRVNPYVLNELIDWDKVPDDPIYR 66

Query: 59  QFIPQKEELNILPE--------ERED------------------PIGDNNHS-------P 85
              P ++ L             E  D                  P G   H+       P
Sbjct: 67  LTFPHRDMLKDHEYAAIRDLVRECADEARIEAVVRQIRLRMNPHPAGQLTHNVPYLDGVP 126

Query: 86  LKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G+ H+Y + +L        C  YC FCFR             ++ ++   AY++   +
Sbjct: 127 LSGLQHKYRETVLFFPSAGQSCHAYCTFCFRWPQFVGMDELKFDARSSQELTAYLRRHPE 186

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPEL 196
           + +++ TGGDPL++S + L + L+ L      H+Q +R  ++     PQR      + +L
Sbjct: 187 VTDILVTGGDPLVMSARALGEYLEPLLAPEFDHLQNIRIGTKSVAYWPQRFVSDKDSDDL 246

Query: 197 IQCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           ++  ++   +G+ + I  H NHP E     A  A+ R+   G  +  Q+ L++ IN+DP 
Sbjct: 247 LRVFEKVVASGRNLAIMGHYNHPRELQHPIAQRALRRIIGTGASVRIQAPLIRHINEDPA 306

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
             A L  T V L   PYY+        + +F+L +    +I  +    +SGL +      
Sbjct: 307 AWAELWTTGVRLGAIPYYMFVERDTGPSDYFKLPLARAYEIFQAAYRSVSGLARTVRGPS 366

Query: 313 LPGGYGKVKID 323
           +    GKV +D
Sbjct: 367 MSAFPGKVMVD 377


>gi|332827425|gb|EGK00177.1| hypothetical protein HMPREF9455_03509 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 444

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 97/389 (24%), Positives = 162/389 (41%), Gaps = 48/389 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           QL+  TL + Q +     I KE + +I+ +           + + LI+  N   DPI   
Sbjct: 7   QLKTYTLHNYQSIPQMAGIPKEFVRDIEIVGRVLPFKTNNYVIDELIDWDNIETDPIFTL 66

Query: 60  FIPQKEELN--------------------------ILPEEREDPIGDNNHSP------LK 87
             P++  L+                          I      +P G  ++ P      LK
Sbjct: 67  NFPRRGMLDKKHYAIVEKLLDGNAEKSFIDAKIQEIRLSLNPNPAGQEHNVPSLGEIKLK 126

Query: 88  GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           GI H+YP+ +L        C  YC FCFR        G   + K+ +  L Y++   ++ 
Sbjct: 127 GIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFAMKEADLLLKYLRVHKEVT 186

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195
           +V+FTGGDP++++   L   +  L      H++ +R  ++     P R   +        
Sbjct: 187 DVLFTGGDPMVMNAAILSSYINPLLTSDFDHIRSIRIGTKSLAYWPYRYLTDTDSDDIIR 246

Query: 196 LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           L + + ++GK + I  H NHP E  +E    AI R+ + G  + +QS LLK IND PEI 
Sbjct: 247 LFEEINKSGKNLSIQAHFNHPRELSTEAVKQAIMRIRSTGAQIRTQSPLLKHINDKPEIW 306

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           A + R  V+L   PYY+          +F L +E+   I     +++SGLC+      + 
Sbjct: 307 AQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNIFRRAYQQVSGLCRTVRGPSMS 366

Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
              GK+++      K G   + +      
Sbjct: 367 DHAGKIQVLGVQEIK-GEKIFILRFIQGR 394


>gi|332885734|gb|EGK05980.1| hypothetical protein HMPREF9456_02244 [Dysgonomonas mossii DSM
           22836]
          Length = 444

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 103/407 (25%), Positives = 170/407 (41%), Gaps = 57/407 (14%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQ 59
           QL+  TL + Q +     I KE +  I+ +           + + LI+  N + DPI   
Sbjct: 7   QLKTYTLHNYQSIPQIANIPKEFVKHIEVVGRVLPFKTNNYVIDELIDWDNIDTDPIFTL 66

Query: 60  FIPQKEELN--------------------------ILPEEREDPIGDNNHSP------LK 87
             P+K  L+                          I      +P G  ++ P      LK
Sbjct: 67  NFPRKGMLDKKHYAIVEQLLDDNVEKSIIEDKIHKIRLSLNPNPAGQEHNVPSLGEVKLK 126

Query: 88  GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           GI H+YP+ +L        C  YC FCFR            + K+ +  L Y++   ++ 
Sbjct: 127 GIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSELKFAMKEVDLLLKYLRVHKEVT 186

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195
           +V+FTGGDP++++   L   +K L      H++ +R  ++     P R   +        
Sbjct: 187 DVLFTGGDPMVMNAAILSSYIKPLLTSDFDHIRSIRIGTKSLAYWPYRYLTDSDSDDIIR 246

Query: 196 LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           L + + ++GK + I  H NHP E  ++    AI R+ N G  + +QS LLK IND PEI 
Sbjct: 247 LFEEINKSGKNLSIQAHFNHPRELSTDAVKQAILRIKNTGAQIRTQSPLLKHINDKPEIW 306

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           A + R  V+L   PYY+          +F L +E+   I     +++SGLC+      + 
Sbjct: 307 AQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNIFRRAYQQVSGLCRTVRGPSMS 366

Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNI----VH-----DYPPKSS 352
              GK+++      K G   + +          VH     +Y PK++
Sbjct: 367 DHAGKIQVLGVQEIK-GEKLFVLRFIQGRNPKWVHIPFFAEYDPKAT 412


>gi|302326000|gb|ADL25201.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 332

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 160/326 (49%), Gaps = 18/326 (5%)

Query: 6   KTLTSAQDLYNANL-----IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP--IAR 58
           KT T   +  +        +  E    + +    ++   +   A+LI   N  +P  + R
Sbjct: 16  KTFTHISEFLDYLGNDFTGLTSEMRANLDQ-EPTFAFNCSKHYADLIK--NSAEPVKLLR 72

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           + +P  +EL   P   +DP+GD      + I+ +Y +R L+     C V CRFCFRR   
Sbjct: 73  EVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVSTSACGVRCRFCFRRNYP 132

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
                 + S         ++   + IWEVI +GGDPL L     + +++ + +   V  L
Sbjct: 133 FQDTQNIAS-----EVSNWLDVHTSIWEVILSGGDPLTLGPGPFRDLVEAIAFHPSVTTL 187

Query: 179 RFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           R H+R+PI+ P  +  +  + L+E  A     + +H NHP E  EE+ A  ++L  +G  
Sbjct: 188 RIHTRLPIMRPDLVM-QHFELLRELPARFNCVLVVHVNHPDELDEESAAVFAQLKFSGWT 246

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           LL+QSVLLKG+NDD E L  L R   E  + PYYLH  D A G +HF ++ E  ++++A 
Sbjct: 247 LLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKGVAHFEVSDERARELIAQ 306

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
           ++ K+ G   P  + ++ G   K  I
Sbjct: 307 IRTKLPGYLVPKLVREIAGEKSKTPI 332


>gi|124004604|ref|ZP_01689449.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina
           ATCC 23134]
 gi|123990176|gb|EAY29690.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina
           ATCC 23134]
          Length = 448

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 88/370 (23%), Positives = 157/370 (42%), Gaps = 49/370 (13%)

Query: 2   QLRHKTLTSAQDLYNAN-LIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
           + ++ TL + +++      + +++   I+ + N         +   LI+  N  NDPI  
Sbjct: 3   KYQNYTLKNFRNIPYVESKLSEDEKFAIEVVGNVLPFKANNYVVEELIDWDNYANDPIFI 62

Query: 59  QFIPQKEEL--------------------------------NILP-EEREDPIGDNNHSP 85
              PQK+ L                                N  P  + +D + + +   
Sbjct: 63  LTFPQKDMLKPEHFAHVAHLLKSGVSRADLKTEVNKIRLQLNPHPAGQMKDNVPEVDGVK 122

Query: 86  LKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G+ H+Y + +L        C  YC FCFR            + ++TE  + YI+    
Sbjct: 123 LTGVQHKYRETMLFFPSQGQTCHAYCTFCFRWPQFVGMNELKFAMRETELLVKYIKVNPH 182

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------ 195
           I +++FTGGDPLI+  K L   +  L    + +++ +R  ++     PQR   +      
Sbjct: 183 ITDILFTGGDPLIMKTKILASYVDALLEADLPNLKTIRIGTKALGYWPQRFTSDTDADDL 242

Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
             L + + +AGK +    H NH  E  +EE   AI R+ N G  + +QS ++K IND  E
Sbjct: 243 LRLFERVNKAGKHLAFMSHFNHGRELETEEVQKAIGRILNTGTAIRTQSPIMKNINDSAE 302

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
             A + R  V+L   PYY+          +F + ++   +I     +++SG+C+      
Sbjct: 303 AWAYMWRKQVDLGCVPYYMFLARDTGAQDYFAIELDRAWQIFQQSYQQVSGVCRTVRGPS 362

Query: 313 LPGGYGKVKI 322
           +  G GKV++
Sbjct: 363 MSAGPGKVQV 372


>gi|237654137|ref|YP_002890451.1| hypothetical protein Tmz1t_3480 [Thauera sp. MZ1T]
 gi|237625384|gb|ACR02074.1| conserved hypothetical protein [Thauera sp. MZ1T]
          Length = 484

 Score =  306 bits (784), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 89/392 (22%), Positives = 159/392 (40%), Gaps = 50/392 (12%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
           M  +  T      +     +  EQ  E+K ++      +   + + LI+  + P DPI +
Sbjct: 46  MSFKVFTARDLDRIPQLARLSPEQRFEMKVVAAVLPFRVNQYVIDELIDWADVPRDPIFQ 105

Query: 59  QFIPQKEELNILPEER----------EDPIG------------------------DNNHS 84
              PQ+  L     ER          +D +                         D +  
Sbjct: 106 LTFPQRGMLASEHYERIARLIEGDADKDALEAAIAEVRHALNPHPADQMQMNMPLDEHGK 165

Query: 85  PLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
            + G+ H+Y + +L        C  YC FCFR       K   ++S +      Y++  +
Sbjct: 166 RIDGLQHKYRETVLFFPSQGQTCHAYCSFCFRWAQFVGDKELRIASSEARVLHDYLRTHT 225

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PE 195
           ++ +++ TGGDP+++  + L++ L+ L      H+Q +R  S+     P R        +
Sbjct: 226 EVTDLLVTGGDPMVMKTRHLREYLEPLLRPEFDHIQTIRIGSKALTFWPHRFLGAEDADD 285

Query: 196 LIQCLK---EAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
           L++ L+   EAGK V +  H NH  E  ++ A AAI R+   G ++ +Q  L+  INDDP
Sbjct: 286 LMRLLRQLVEAGKHVALMAHYNHWKELETDAAHAAIRRIRATGAVIRAQGPLIAHINDDP 345

Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
              A L +T V L + PYY+          +F + +    +I     +++SGL +     
Sbjct: 346 AAWARLWKTEVRLGLVPYYMFVERDTGARHYFEVPLARAWEIYQQAIQQVSGLARTARGP 405

Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
            +    GKV+I     +  G   + +      
Sbjct: 406 SMSASPGKVEIQGV-TEIAGEKVFVLRFIQGR 436


>gi|262199318|ref|YP_003270527.1| radical SAM domain-containing protein [Haliangium ochraceum DSM
           14365]
 gi|262082665|gb|ACY18634.1| radical SAM domain-containing protein [Haliangium ochraceum DSM
           14365]
          Length = 458

 Score =  305 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 79/370 (21%), Positives = 160/370 (43%), Gaps = 50/370 (13%)

Query: 4   RHKTLTS--AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + + +TS     L + + +  E   ++K +++ +   +   + N LI+    P+DP+ + 
Sbjct: 15  KFRVITSKHLGQLDHLSFLSTETRQQLKAVASVFPFRVNEYVVNHLIDWSKVPDDPMFQL 74

Query: 60  FIPQKEELNILP-EERED-------------------------PIGDNNHSP-------L 86
             PQ   L         D                         P G    +        +
Sbjct: 75  TFPQPGMLTDDDMAHMLDLIRRDEPEETITRAAQRIQMRLNPHPAGQMALNVPRVNGKVV 134

Query: 87  KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           +G+ H+Y + +L        C  YC +CFR     S      ++++ E  LAY++E   I
Sbjct: 135 RGVQHKYRETVLFFPSQGQTCHSYCTYCFRWAQFISNDELKFAAQEVEPLLAYLKEHPGI 194

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP-----ELI 197
            +V+FTGGDP+++    L++ ++ L    + HV  +R  ++ P+  P R        EL+
Sbjct: 195 SDVLFTGGDPMVMKTPVLRRYIEPLLAADLPHVSTIRIGTKAPVYWPYRFTDGNDADELL 254

Query: 198 QCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
           +  +E    GK + + +H +H  E  + E   A++R+   G ++  Q+ L++ +ND PE+
Sbjct: 255 RLFEEIVARGKHLAVLVHFSHYREVEAPEVQTALARIRATGAVIRCQAPLIRHVNDTPEV 314

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
              +  + V+    PYY+          +F++ +     I  + ++++SGL +      +
Sbjct: 315 WTRMWHSQVKQGAIPYYMFVERDTGPNEYFKVPLHRALDIFQAARKQLSGLSRTVRGPVM 374

Query: 314 PGGYGKVKID 323
               GKV ++
Sbjct: 375 SCTPGKVLVN 384


>gi|261416917|ref|YP_003250600.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
 gi|261373373|gb|ACX76118.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter
           succinogenes subsp. succinogenes S85]
          Length = 322

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 99/326 (30%), Positives = 160/326 (49%), Gaps = 18/326 (5%)

Query: 6   KTLTSAQDLYNANL-----IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP--IAR 58
           KT T   +  +        +  E    + +    ++   +   A+LI   N  +P  + R
Sbjct: 6   KTFTHISEFLDYLGNDFTGLTSEMRANLDQ-EPTFAFNCSKHYADLIK--NSAEPVKLLR 62

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           + +P  +EL   P   +DP+GD      + I+ +Y +R L+     C V CRFCFRR   
Sbjct: 63  EVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVSTSACGVRCRFCFRRNYP 122

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
                 + S         ++   + IWEVI +GGDPL L     + +++ + +   V  L
Sbjct: 123 FQDTQNIAS-----EVSNWLDVHTSIWEVILSGGDPLTLGPGPFRDLVEAIAFHPSVTTL 177

Query: 179 RFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
           R H+R+PI+ P  +  +  + L+E  A     + +H NHP E  EE+ A  ++L  +G  
Sbjct: 178 RIHTRLPIMRPDLVM-QHFELLRELPARFNCVLVVHVNHPDELDEESAAVFAQLKFSGWT 236

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           LL+QSVLLKG+NDD E L  L R   E  + PYYLH  D A G +HF ++ E  ++++A 
Sbjct: 237 LLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKGVAHFEVSDERARELIAQ 296

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
           ++ K+ G   P  + ++ G   K  I
Sbjct: 297 IRTKLPGYLVPKLVREIAGEKSKTPI 322


>gi|149911234|ref|ZP_01899857.1| hypothetical 38.7 kDa protein [Moritella sp. PE36]
 gi|149805688|gb|EDM65687.1| hypothetical 38.7 kDa protein [Moritella sp. PE36]
          Length = 310

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 99/297 (33%), Positives = 157/297 (52%), Gaps = 12/297 (4%)

Query: 19  LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
             KKE+I+        +         N+ +  +PNDPI  Q IP+ EEL+ +     DP+
Sbjct: 11  FTKKEEIEN-----KEFPFRSPLEFLNIADFDDPNDPILLQIIPKLEELDTVKGFNLDPV 65

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
            D+ H  + G++H+Y DR+LL     CP++CR+CFR+    S      + +  EA L+YI
Sbjct: 66  NDSQHEKITGLIHKYHDRVLLLFSKHCPIHCRYCFRKGYNYSDN----NKQQIEAWLSYI 121

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           +    I EVI +GGDPL ++   L   +  +  IKH+   R HSR+P+V P  ++  L  
Sbjct: 122 ESNHDIEEVILSGGDPLFVNSATLLDFVTRVSAIKHITRFRIHSRMPVVSPSLLDKNLAN 181

Query: 199 CLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            ++ A K    + + IH+NH  E ++E + ++S     G I+L+ SVLLKGIND+   L 
Sbjct: 182 RIRRAAKKDIDMILVIHSNHEKELTDEVVKSVSSFQAEGFIILNHSVLLKGINDNALTLK 241

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           +L R  + + + PYYL+  D   G++HF +       I   L++  SG   P  + D
Sbjct: 242 SLSRKLIRMGVIPYYLNLLDKIEGSAHFFVEKNISLSIYQELQKISSGYLVPKLVQD 298


>gi|328949906|ref|YP_004367241.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884]
 gi|328450230|gb|AEB11131.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884]
          Length = 441

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 89/367 (24%), Positives = 157/367 (42%), Gaps = 48/367 (13%)

Query: 4   RHKTLTS--AQDLYNANLIKKEQIDEIKEISNHYSIALTPV-IANLINPHN-PNDPIARQ 59
           R++ +T+           +  E  + +  +S           +  LI+    P DPI + 
Sbjct: 12  RYRAITNQNIHKYSEWERLDPELKEAVMVVSQVLPFRTNEYVMRELIDWSRVPEDPIFQL 71

Query: 60  FIPQKEELNILPEER--------------------------EDPIGDNNHS-------PL 86
             PQ+E L+    ER                            P G   H+        L
Sbjct: 72  TFPQREMLDPEDYERIRTLLNNGASREELLAAANEIRFRLNPHPAGQLTHNVPTLNGRKL 131

Query: 87  KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y + +L        C  YC +CFR       +     +++T+  +AY+Q   ++
Sbjct: 132 PGLQHKYHETVLFFPGQGQTCHAYCTYCFRWAQFIGLQDIKFEARETDDLVAYLQAHPEV 191

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
            +V+ TGGDP+I+  K L+K L+ L  I  ++ +R  ++     PQR   +         
Sbjct: 192 TDVLVTGGDPMIMRTKILRKYLEPLLEIPTLRTIRIGTKSLAYWPQRYVTDADADDALRF 251

Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            + +  AGK + I  H++HP E  +  A  AI R+   G ++ +Q+ L+K +NDDP++ A
Sbjct: 252 FEEIVAAGKHLAIMAHSSHPVELATPIAQEAIRRVRETGAVIRTQAPLIKHVNDDPDVWA 311

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
              R  V+L + PYY+          +F + +   Q+I A+   ++SGL +      +  
Sbjct: 312 EKWRQEVKLGMIPYYMFVERDTGPKRYFEVPLARAQEIFAAAWRQVSGLARTVRGPSMSA 371

Query: 316 GYGKVKI 322
             GKV+I
Sbjct: 372 FPGKVRI 378


>gi|332829850|gb|EGK02492.1| hypothetical protein HMPREF9455_01449 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 441

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 89/388 (22%), Positives = 161/388 (41%), Gaps = 48/388 (12%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQF 60
           L+  TL +   +     + +E + +I+ +           + + LI+  N + DPI    
Sbjct: 5   LKSYTLHNFLSIPQIASLSEEMVRDIEVVGRVLPFKTNNYVVDELIDWDNLDTDPIFTLN 64

Query: 61  IPQKEELN--------------------------ILPEEREDPIGDNNHSP------LKG 88
            P++  L                           I      +P G  ++ P      LKG
Sbjct: 65  FPRRGMLEKKHYAAVERLLNEHFDGKELNEKIQQIRLSLNPNPAGQEHNVPYLGEIKLKG 124

Query: 89  IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           I H+YP+ +L        C  YC FCFR        G   + K+ +    Y++   ++ +
Sbjct: 125 IQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFAMKEADLLFKYLRLHKEVTD 184

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------L 196
           ++FTGGDP+I++   L+  ++ L      H++ +R  ++     P R   +        L
Sbjct: 185 ILFTGGDPMIMNASTLEAYIRPLLEPEFDHIRTIRIGTKSLAYWPYRYLTDKDSDDIIRL 244

Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            + +  +GK + +  H NHP E  +E    AI+R+ + G  + +QS LL+ IND PE+ A
Sbjct: 245 FELVNRSGKSLSLQAHFNHPRELSTEAVKQAIARIRSTGSQIRTQSPLLRNINDKPELWA 304

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            + R  V+L   PYY+          +F L +E+  +I      ++SGLC+      +  
Sbjct: 305 RMWRKQVDLGCIPYYMFIARDTGSKHYFELPLEKCWQIFRRAYRQVSGLCRTVRGPSMSD 364

Query: 316 GYGKVKIDTHNIKKVGNGSYCITDHHNI 343
             GK+++      K G   + +      
Sbjct: 365 HAGKIQVLGVQEIK-GEKIFVLRFIQGR 391


>gi|300087493|ref|YP_003758015.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
 gi|299527226|gb|ADJ25694.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 440

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 85/390 (21%), Positives = 162/390 (41%), Gaps = 48/390 (12%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPH-NPNDPIAR 58
           MQ +  TL + +++     +  ++I +I+ +           +  NLI+      DP+  
Sbjct: 1   MQYKPFTLNNFREIPQVEALSLQKIRDIEVVGTVLPFRTNNYVVDNLIDWECAETDPLFI 60

Query: 59  QFIPQKEELNILPEERED--------------------------PIGDNNHSP------- 85
              PQK  L+     R D                          P G    +        
Sbjct: 61  ATFPQKGMLSPEDYHRVDTLLREGAGQEVILRTVTEIRQKMNPHPAGQLELNVPVLNGES 120

Query: 86  LKGIVHRYPDRILLKLLH--VCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKS 142
           L GI H+Y + +L        C  YC FCFR    V   +   ++S++ +  + Y++ + 
Sbjct: 121 LPGIQHKYRETVLFFPSQGQTCHAYCTFCFRWPQFVKGMEDLKIASREIDTLVEYLKSRP 180

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPE------ 195
           ++ +V+ TGGDPL++    L + ++ L  +  ++ +R  +R     P R +  +      
Sbjct: 181 EVTDVLVTGGDPLVMKAGLLARYIEPLLVLPGIRTIRIGTRSLSFWPYRYVTDDDAEELL 240

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEI 253
            L + ++EAGK +    H NHP E   E +  A+ R+   G ++ +QS LL+ IND   +
Sbjct: 241 TLFRRVREAGKHLAFMAHFNHPVELLPEIVPEAVRRIRETGAVIRTQSPLLRHINDSEAL 300

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A + R  V++   PYY+          +F +T+++  ++     + ISG+C+      +
Sbjct: 301 WAQMWRRQVDMGCVPYYMFMARDTGAQRYFSVTLQDAWRVYQGAFQAISGICRTAEGPVM 360

Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
               GKV++        G+  + +      
Sbjct: 361 SALPGKVQVMGTATIG-GDKVFVLRLVQGR 389


>gi|226946213|ref|YP_002801286.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ]
 gi|226721140|gb|ACO80311.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ]
          Length = 433

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 81/370 (21%), Positives = 158/370 (42%), Gaps = 48/370 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + +  +L +         + KE+   ++ +   +   +   I + LI+  N P+DPI R 
Sbjct: 9   KFQPYSLRNIHHAPQWQKLSKEEKHSLEVLGAVFPFKVNQYILDELIDWGNIPDDPIFRL 68

Query: 60  FIPQKEELNILPEE--------------------------REDPIGDNNHS-------PL 86
             P K+ L     +                            +P G   H+       P+
Sbjct: 69  TFPHKDMLRESEFQELSNAILNQFNEAEIQSISNKIRFRMNPNPAGQMTHNVPRMNGVPI 128

Query: 87  KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y + +L        C  YC FCFR             ++ +E  + Y++E  ++
Sbjct: 129 NGLQHKYKETVLFFPSAGQTCHSYCTFCFRWPQFVGMSSLRFEARSSEPLVQYLKEHKEV 188

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195
            +V+ TGGDPL+++ + L + ++ L    ++H++ +R  ++     PQR   +       
Sbjct: 189 TDVLITGGDPLVMNTRILYEFIRPLLIPELEHIKNIRIGTKSISYWPQRFVTDKDADDLL 248

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
            L + +   GK + +  H NHP E  ++ A  A+ R+   G+ +  QS ++K IND+P+ 
Sbjct: 249 HLFEDIIATGKNLALMAHYNHPCEIKTKIAQIAVKRIVGTGVTVRMQSPIIKHINDNPQA 308

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
             +L  T V+L   PYY+        +++F + +    +I     + +SGL +      +
Sbjct: 309 WVDLWTTGVQLGAIPYYMFVERDTGPSNYFEIPLVSAWEIFQKAYQSVSGLARTVRGPSM 368

Query: 314 PGGYGKVKID 323
               GK+ +D
Sbjct: 369 STFPGKIMVD 378


>gi|238027720|ref|YP_002911951.1| hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1]
 gi|237876914|gb|ACR29247.1| Hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1]
          Length = 454

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 81/385 (21%), Positives = 148/385 (38%), Gaps = 48/385 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59
           + +     S  +    + I  E  + +  IS      +   +   LI+    P+DP+ R 
Sbjct: 5   KFKAYNAKSIANSPYWSRIPNEIKEALGTISRVLPFRINEYVLRELIDWERVPDDPVFRL 64

Query: 60  FIPQKEE--------------------------------LNILP-EEREDPIGDNNHSPL 86
             P                                    +N  P  +    +   +  PL
Sbjct: 65  TFPHPGMLPADDYRRLRELLAQGADPAAGARYIDALRHRMNPHPAGQMTHNVPMLDGRPL 124

Query: 87  KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y + +L        C  YC FCFR       +    ++++++    Y++   ++
Sbjct: 125 PGLQHKYAETVLFFPAAGQTCHAYCSFCFRWPQFIGAEDMKFNARESDELSRYLRLHPEV 184

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
            +V+ TGGDP++++ + L   ++ L  I H+Q +R  ++     PQR   +        L
Sbjct: 185 TDVLITGGDPMVMNAESLAGYIEPLLAIPHLQNIRIGTKSVAYWPQRFVTDKDADAVLRL 244

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            + +   GK + +  H NHP E   E A  A+ R+   G  +  QS +++ IND  E   
Sbjct: 245 FERVVAHGKNLSVMAHYNHPAELRPEIARRAVKRIIGTGATVRMQSPIVRHINDSAETWQ 304

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            L  T V L   PYY+          +F L + +   I  +  +++SGL +      +  
Sbjct: 305 ELWTTGVRLGAIPYYMFVERDTGPQRYFELPLVDAYHIFRNAYQRVSGLSRTVRGPSMST 364

Query: 316 GYGKVKIDTHNIKKVGNGSYCITDH 340
            YGKV +D   +  +G         
Sbjct: 365 LYGKVLVD--GVVTLGGEKVFALQF 387


>gi|161529280|ref|YP_001583106.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus
           SCM1]
 gi|160340581|gb|ABX13668.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus
           SCM1]
          Length = 448

 Score =  301 bits (772), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 84/369 (22%), Positives = 149/369 (40%), Gaps = 49/369 (13%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
           L+  TL++ +DL     I +E+  E++ + N         +   LIN ++ PNDP+    
Sbjct: 14  LKSYTLSNFRDLPQIQNISEEKQFEMEVVGNVLPFKANNYVVEQLINWNDIPNDPMYVLT 73

Query: 61  IPQKEEL--------------------------NILPEEREDPIGD--------NNHSPL 86
            PQ+  L                           I  +    P G          + + L
Sbjct: 74  FPQRGMLKPEHYAKMENTLKNTSDKKEIANVANEIRLQLNPHPAGQMELNVPTLKDGTKL 133

Query: 87  KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y +  L        C  YC FCFR            + ++ E  + Y+ E  +I
Sbjct: 134 YGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMQEGEQLVQYVSEHPEI 193

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195
            +V+FTGGDP+I+  K   K +  L    + +++ +R  ++     P +   +       
Sbjct: 194 SDVLFTGGDPMIMKAKMFSKYVDALIEAKLPNLKTIRIGTKALSYWPYKFLTDSDSQEML 253

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
            + Q + ++G  +    H NH  E  +    +AI  +   G  + +QS LL  INDD E+
Sbjct: 254 QVFQKITDSGLHLAFMAHFNHLNELSTNAVKSAIKEVRKTGAQIRTQSPLLAHINDDAEM 313

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            AN+    V+L   PYY+          +F + + +  +I +     +SGL +      +
Sbjct: 314 WANMWTKQVQLGCIPYYMFVVRDTGAQHYFGVPLVKAYEIFSQAYSTVSGLGRTVRGPSM 373

Query: 314 PGGYGKVKI 322
               GKV++
Sbjct: 374 SATPGKVQV 382


>gi|113477791|ref|YP_723852.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101]
 gi|110168839|gb|ABG53379.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101]
          Length = 445

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 82/370 (22%), Positives = 148/370 (40%), Gaps = 48/370 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           ++R     +   +   +   ++    IK ++          I   LI+ +N PNDP+ R 
Sbjct: 9   KIRFYGAKNLDSIPQLSNFSEQDRLGIKAVAQVLPFLTNNYILEQLIDWNNVPNDPMFRL 68

Query: 60  FIPQKEELNILPEE--------------------------REDPIGDNNHS-------PL 86
             P  E L                                   P G   H+       P+
Sbjct: 69  TFPHPEMLESKDYNHIIQLLTENAPKTVLKQAANKIRQQLNPHPSGQKQHNVPTFNSEPV 128

Query: 87  KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            GI H+Y + +L+       C  YC FCFR       +G   +++++     Y+Q+  ++
Sbjct: 129 PGIQHKYRETVLVFPTAGQTCHAYCTFCFRWPQFVGLEGLKFATRESGMFQQYLQQHQEV 188

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQR-INPE------ 195
            +V+FTGGDP+ +  ++L   +  L      H+Q +R  ++     P R +  E      
Sbjct: 189 RDVLFTGGDPMTMKARQLSLYIDPLLEAKFDHIQTIRIGTKSISFWPYRYVTDEDADNTL 248

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
            L + + + GK + I  H  H  E  +  A  AI R+ + G  + +Q+ +++ IND  E 
Sbjct: 249 RLFEKIVKRGKHLAIMAHYEHWQELDTPVATEAIRRIRSTGAQIRTQAPVVRHINDSAET 308

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A +++  V L   PYY+          +F + +    +I     +++SGL +      +
Sbjct: 309 WAKMLQMQVSLGCIPYYMFVERQTGAKKYFEIPLVRVLEIYREAVKQVSGLARTIRGPLM 368

Query: 314 PGGYGKVKID 323
               GKV ID
Sbjct: 369 SALPGKVAID 378


>gi|332706173|ref|ZP_08426242.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L]
 gi|332355010|gb|EGJ34481.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L]
          Length = 445

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 82/362 (22%), Positives = 146/362 (40%), Gaps = 48/362 (13%)

Query: 10  SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL 67
             ++L     +   +   +K +S  +   +   I   LI+ +N P+DPI R   P  + L
Sbjct: 16  DIENLPQLQKLPSHERLAMKAVSKVFPFRVNNYIVEQLIDWNNLPDDPIFRMTFPHPDML 75

Query: 68  NI--------------------------------LPEERED-PIGDNNHSPLKGIVHRYP 94
           N                                  P  + D  +   +   + GI H+YP
Sbjct: 76  NPEDLNRVIKLLKTNGSKETIRRTVDDIRSRLNPHPGGQVDYNVPRLDGELISGIQHKYP 135

Query: 95  DRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           D +L+       C  YC+FCFR            +++++     Y+++  ++ +V+ TGG
Sbjct: 136 DTVLIFPSSGQACHAYCQFCFRWAQFVDTNTHKFTTRESGRFQDYLRQHKEVTDVVLTGG 195

Query: 153 DPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------LIQCLKE 202
           DP+I+S +RL + ++ L     +H+Q +R  ++     P R   +        L + +  
Sbjct: 196 DPMIMSARRLFQYIEPLLDPEFEHIQTIRIGTKSVAYWPYRYVTDRDADDVLRLFEKIVY 255

Query: 203 AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           +GK + +  H  H  E  +  A  AI R+ + G  L +QS LLK +ND       + +  
Sbjct: 256 SGKHLAVMGHYTHWRELDTPIAQEAIRRIRSTGAQLRAQSPLLKHVNDSARAWRKMWQMQ 315

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
           V L   PYY+          +F + +    +I     + +SGL Q      +    GKV 
Sbjct: 316 VRLGCIPYYMFVERDTGPKHYFGIPLVRTWEIFRHAIKGVSGLSQTVRGPVMSALPGKVL 375

Query: 322 ID 323
           I 
Sbjct: 376 IS 377


>gi|269125115|ref|YP_003298485.1| hypothetical protein Tcur_0857 [Thermomonospora curvata DSM 43183]
 gi|268310073|gb|ACY96447.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183]
          Length = 446

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 74/368 (20%), Positives = 142/368 (38%), Gaps = 46/368 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + R  T     +L     +  +Q   I+ ++          +   LI+    P+DPI R 
Sbjct: 18  KFRAYTAKHLDELTARAGLSADQRLAIRAVATVLPFRTNSYVVEELIDWSAAPDDPIYRL 77

Query: 60  FIPQKEEL--------------------------------NILPEERED-PIGDNNHSPL 86
             PQ++ L                                N  P  + +  +       +
Sbjct: 78  VFPQEDMLPADDVAHIAGLLRRQAPRQEIEAAAHRVRMRLNPHPAGQLELNVPSFGDGVV 137

Query: 87  KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y + +L        C  YC +CFR      +    L+  D      Y+    ++
Sbjct: 138 PGMQHKYDETVLYFPKQGQTCHAYCTYCFRWAQFVGEPDLKLAGDDALQLRDYLVAHPRV 197

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
             V+FTGGD +I+    L++ ++ L  ++ ++ +R  ++     PQ+   +        L
Sbjct: 198 TNVLFTGGDAMIMGEPVLRRYVEPLLELEQIESIRIGTKSLAYWPQKFVTDPDADAMLRL 257

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            + +  AGK +    H +HP E        A+ R+   G ++ +Q+ L++ INDDP++  
Sbjct: 258 FEQVVNAGKSLAFMAHFSHPRELEPAMVREAVRRIRGTGAVIRTQAPLIRSINDDPKVWE 317

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            + RT   + + PYY+          +F + +    +I       +SGL +      +  
Sbjct: 318 TMWRTQTRMGMVPYYMFVERDTGPRDYFAVPLGRAYEIFRDAYRHVSGLARTVRGPSMSA 377

Query: 316 GYGKVKID 323
             GKV +D
Sbjct: 378 TPGKVCVD 385


>gi|270264523|ref|ZP_06192789.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13]
 gi|270041659|gb|EFA14757.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13]
          Length = 449

 Score =  300 bits (768), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 79/370 (21%), Positives = 154/370 (41%), Gaps = 48/370 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + +  TL +            E    ++ +S+     +   I + LI+  N P+DPI R 
Sbjct: 6   KFQPYTLRNINQAPQWQNFTSEMRHSVEVLSHVLPFRVNQYILDELIDWDNIPDDPIFRL 65

Query: 60  FIPQKEE--------------------------------LNILP-EEREDPIGDNNHSPL 86
             P K+                                 +N  P  +    +   ++ PL
Sbjct: 66  TFPHKDMLRSEEFSQLSDAITRQAGDAELQMLVNKIRMRMNPHPAGQLTHNVPILDNEPL 125

Query: 87  KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y + +L        C  YC FCFR             +++++  + Y++  +++
Sbjct: 126 SGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMDELKFEARNSQMLVEYLKRHTEV 185

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRIN-----PELI 197
            +++ TGGDP+I++ + L   ++ L    + H++ +R  ++     PQR        +++
Sbjct: 186 TDILITGGDPMIMNARALGDYIRPLLVPELSHIKNIRIGTKSVSYWPQRYLTDKDADDVL 245

Query: 198 QCLKE---AGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEI 253
           +  +E   +G+ + +  H NHP+E   E    A+ R+ + G  +  QS L++ IND+P+ 
Sbjct: 246 RIFEEVVASGRNLALMAHYNHPHEIQPEVAQRALKRIISTGATVRMQSPLIRHINDNPKD 305

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A L  T V L   PYY+          +F + +    +I     + +SGL +      +
Sbjct: 306 WATLWTTGVRLGAIPYYMFVERDTGPNDYFGMPLIRAWEIFQEAYKSVSGLARTVRGPSM 365

Query: 314 PGGYGKVKID 323
               GK+ ID
Sbjct: 366 SAFPGKIMID 375


>gi|197294893|ref|YP_002153434.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
 gi|195944372|emb|CAR56973.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315]
          Length = 466

 Score =  299 bits (766), Expect = 5e-79,   Method: Composition-based stats.
 Identities = 87/385 (22%), Positives = 152/385 (39%), Gaps = 49/385 (12%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
            +    +   DL     +     ++I  ++      +   +   LI+  N P+DP+ R  
Sbjct: 28  FKAYNRSKLDDLPQLARLPPRMREQIGLVARVLPFKVNRYVVEQLIDWTNVPDDPLFRLT 87

Query: 61  IPQKEE--------------------------------LNILPEEREDPIGDNNHSPLKG 88
            PQ +                                 +N  P ++     + +  P  G
Sbjct: 88  FPQPDMLAPDDLGELAMLSRDAARGADLDALIGRLRVRMNPHPADQRLNEPELDGEPCPG 147

Query: 89  IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           I H+Y   +L    H   C  YC FCFR            +S +     AY++   ++ +
Sbjct: 148 IQHKYAQTVLYFPSHGQTCHAYCTFCFRWPQFVGDASLKFASSEAARLHAYLRAHGEVTD 207

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPELIQC 199
           ++ TGGDP+++S  RL++ L  L    ++HV  +R  ++     P R       PEL+  
Sbjct: 208 LLMTGGDPMVMSATRLREYLMPLLAPGLEHVGNIRIGTKALTYWPYRFVSDPDTPELLAL 267

Query: 200 LK---EAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILA 255
           L+   +AG+ V +  H NH  E S E    A++ L   G+++ SQ  +L+ INDD E+  
Sbjct: 268 LRTLIDAGRNVTVMAHLNHWRELSTEVAEQAVTNLRRIGVVIRSQGPVLRHINDDAEVWR 327

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
                 V L I PYY+          +F L +     I  +    +SGL +      +  
Sbjct: 328 RNWVGQVRLGIVPYYMFVERDTGPRGYFELPLARALDIYNTAIASVSGLARSARGPSMSA 387

Query: 316 GYGKVKIDTHNIKKVGNGSYCITDH 340
           G GKV++      ++    Y + + 
Sbjct: 388 GPGKVEVA--GTLELQGQRYFLLNF 410


>gi|118577041|ref|YP_876784.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A]
 gi|118195562|gb|ABK78480.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A]
          Length = 456

 Score =  298 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 85/391 (21%), Positives = 155/391 (39%), Gaps = 52/391 (13%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
           L+  T+++ + L     + +E   E+  +++         +   LI+    P+DP+    
Sbjct: 18  LKSYTISNYKQLPQVQALSEEVRFEMDVVASVLPFKTNNYVVEQLIDWDRVPDDPMYVLT 77

Query: 61  IPQKEEL-------------NILPEERED-------------PIGD--------NNHSPL 86
            PQK  L             N  P+E  D             P G          + + L
Sbjct: 78  FPQKNMLKKRHFDQVAQMIKNETPKEEMDKKINDVRMELNPHPAGQLELNVPSLKDGTKL 137

Query: 87  KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y +  L        C  YC FCFR            + ++ E    YI E  +I
Sbjct: 138 YGMQHKYNETCLFFPSQSQTCHAYCTFCFRWPQFVGMDDMKFAMREGEQLAQYIGEHPEI 197

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI--------NP 194
            +V+FTGGDP+I+  K  +  + TL    + ++  +R  +++    P ++          
Sbjct: 198 SDVLFTGGDPMIMKAKMFRTYVDTLIDAKLPNLTTIRIGTKMLSYWPYKVLSDDDAAETL 257

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
           +  + + ++G  + I  H NHP E  ++   +AI ++   G  + +QS LL  INDD + 
Sbjct: 258 DTFRHISDSGLHLSIMGHFNHPVELSTDAVKSAIRKIRATGAQIRTQSPLLSHINDDADA 317

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
              +    V L   PYY+          +F +++    +I  S   ++SGL +      +
Sbjct: 318 WVRMWTQQVRLGCIPYYMFIVRDTGAQHYFGMSLARAYEIFTSAYRRVSGLARTVKGPSM 377

Query: 314 PGGYGKVKIDTHNIKKVGNGS-YCITDHHNI 343
               GKV I  + I ++G    + +      
Sbjct: 378 SATPGKVLI--NGIPEIGGKKLFSLRFLQGR 406


>gi|15639115|ref|NP_218561.1| hypothetical protein TP0121 [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189025355|ref|YP_001933127.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum
           SS14]
 gi|4033488|sp|O83158|Y121_TREPA RecName: Full=Uncharacterized KamA family protein TP_0121
 gi|3322385|gb|AAC65111.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum
           str. Nichols]
 gi|189017930|gb|ACD70548.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059540|gb|ADD72275.1| putative radical SAM domain protein [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 355

 Score =  298 bits (763), Expect = 9e-79,   Method: Composition-based stats.
 Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 9/317 (2%)

Query: 39  LTPVIANLINPHNPNDP--IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
           ++P  A+LI      D   + RQ     +E  +   E  DP+G++ +     +VH+Y +R
Sbjct: 40  ISPAYAHLIAQAQGADAQALKRQVCFAPQERVVHACECADPLGEDRYCVTPFLVHQYANR 99

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L+     C  +CR+CFRR  +  + G + + ++ E  + Y++    + E++ +GGDPL 
Sbjct: 100 VLMLATGRCFSHCRYCFRRGFIAQRAGWIPN-EEREKIITYLRATPSVKEILVSGGDPLT 158

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
            S  ++  + + LR +    I+R  +R     PQ   PELI  L+E  KPV+I  H NHP
Sbjct: 159 GSFAQVTSLFRALRSVAPDLIIRLCTRAVTFAPQAFTPELIAFLQEM-KPVWIIPHINHP 217

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E      A +     AG+ + SQSVLL+G+ND  E L  L      L +KP YL   DL
Sbjct: 218 AELGSTQRAVLEACVGAGLPVQSQSVLLRGVNDSVETLCTLFHALTCLGVKPGYLFQLDL 277

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK-----VG 331
           A GT  FR+ + +   +  +LKE++SGL  P   +DLPGG GK  +    +++       
Sbjct: 278 APGTGDFRVPLSDTLALWRTLKERLSGLSLPTLAVDLPGGGGKFPLVALALQQDVTWHQE 337

Query: 332 NGSYCITDHHNIVHDYP 348
             ++         + YP
Sbjct: 338 REAFSARGIDGAWYTYP 354


>gi|38567180|emb|CAE76473.1| related to L-lysine 2, 3-aminomutase [Neurospora crassa]
          Length = 519

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 95/384 (24%), Positives = 168/384 (43%), Gaps = 69/384 (17%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQI-------------DEIKEI-----SNHYSIALTPV 42
            Q+ +    + +       +  E++             + IK++     +   +I +TP 
Sbjct: 149 WQVANTVQGTVKLFKFLQTVVPEEVPVDKLGMQMQSRDEFIKDVLDGVAAATMAIRMTPY 208

Query: 43  IANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100
           I + IN  +P +DPIARQF+P K   L   P+   D + +   SP+KG+    P R    
Sbjct: 209 ILSRINWLDPRHDPIARQFLPMKSIMLPDHPKLTLDSLHETADSPVKGLASLKPTR---- 264

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
                                       +  E A AYI+ + ++ +++ +GGD   L  +
Sbjct: 265 ----------------------------RRWEEAFAYIESRPELQDIVVSGGDSYYLQPE 296

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-------KEAGKPVYIA 210
           +L  + + L  + +++  RF S+   V P RI  E    +  L       K+AGK + + 
Sbjct: 297 QLTLIGERLISLPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISNKAKKAGKSMALH 356

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
            H N P E S  +  A  +L   G+++ +Q+VLL+G+NDD E ++ L+R   +  I PYY
Sbjct: 357 THFNSPNEISWISSDASQKLFENGVMVRNQTVLLRGVNDDYETMSTLIRQLADNNITPYY 416

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330
           ++  DL     H R  ++    + A ++  I+G   P +++DLPGG GK    ++     
Sbjct: 417 VYQCDLVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGGKRLACSYQSYDR 476

Query: 331 GNGSYCI-------TDHHNIVHDY 347
             G            D  + V++Y
Sbjct: 477 DTGVSTFVAPAVTGRDKADKVYEY 500


>gi|145595294|ref|YP_001159591.1| hypothetical protein Strop_2771 [Salinispora tropica CNB-440]
 gi|145304631|gb|ABP55213.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440]
          Length = 448

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 81/367 (22%), Positives = 149/367 (40%), Gaps = 45/367 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + R        +L     +  + +  I+ IS      +   + + LI+    P+DPI R 
Sbjct: 13  RFRSFGPHHIDELGARYGLSADNVRAIRTISRVLPFRVNEYVLSHLIDWDRIPDDPIFRL 72

Query: 60  FIPQKEEL-------------------------NILPEEREDPIGDNNHSP-------LK 87
             PQ+  L                          I       P G   H+        L 
Sbjct: 73  VFPQRGMLAAADERLLGDLLGAGDRTGLRVEVARIRAGLNPHPSGQQQHNVPHLDGHELP 132

Query: 88  GIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           G+ H+Y + +L        C  YC +CFR            ++   E  + Y+     + 
Sbjct: 133 GMQHKYRETVLYFPQQGQTCHAYCTYCFRWAQFVGDADLRFAAPGPEQLVTYLHRHPAVT 192

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----PELIQCL 200
           +V+ TGGDP+I+S +RL+  ++ L  +  V+ +RF ++     P R        +L++  
Sbjct: 193 DVLVTGGDPMIMSTERLRSHVEPLLRVDTVRTVRFGTKAVAYWPYRFVSDSDADDLLRLF 252

Query: 201 KE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
            +   AG+ V +  H +HP E + E A  AI+R+ + G ++  Q+ L++ +NDDP   ++
Sbjct: 253 AQVVAAGRNVAVMAHFSHPRELATEIATRAIARIRSTGAVVYCQAPLIRYVNDDPHAWSD 312

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           + R  + L   PYY+          +F++ +     I  +  + + GL +      +   
Sbjct: 313 MWRAELALGAVPYYMFVERDTGPRDYFQVPLTRAADIFRTAYQDLPGLARTVRGPVMSAT 372

Query: 317 YGKVKID 323
            GKV +D
Sbjct: 373 PGKVLVD 379


>gi|77918358|ref|YP_356173.1| hypothetical protein Pcar_0744 [Pelobacter carbinolicus DSM 2380]
 gi|77544441|gb|ABA88003.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380]
          Length = 442

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 86/385 (22%), Positives = 150/385 (38%), Gaps = 50/385 (12%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
           M+    T      +     +  E    +K +S      +   + + LI+    P+DP+ R
Sbjct: 1   MEYHAYTPDHFDRIAELGCLSAEYRFGMKVVSQVLPFRVNRYVIDELIDWGKVPHDPMFR 60

Query: 59  QFIPQKEELNILPEER--------------------------EDPIGDN-------NHSP 85
              P    L     ++                            P G         +   
Sbjct: 61  LVFPDPGMLLPDDFKQIASLLASGADRQALDRAVHEIRLRLNPHPAGQQTLNVPCLDGHK 120

Query: 86  LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L G+ H+Y + +L        C  YC FCFR      ++   +    T     Y++  S+
Sbjct: 121 LPGLQHKYRETVLFFPRLGQTCHSYCSFCFRWPQFVCERDMRIMGPRTPGLFDYLRRHSE 180

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------ 195
           + +++ TGGDPL++    L + L+ L      H+Q +R  ++     P R   +      
Sbjct: 181 VTDLLVTGGDPLVMKAASLAEFLEPLLSPEFAHLQTIRIGTKSLSFWPYRFLTDRDADDL 240

Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
             L + L + GK + +  H NH  E  +E A  AI R+   G  + +QS ++  +NDDP+
Sbjct: 241 LRLFERLVKGGKHLAVMAHYNHWRELETEVARRAIERVKATGATIRTQSPVVAHVNDDPQ 300

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           +   L +T V L + PYYL          +F + +E   +I     +K+SGL +      
Sbjct: 301 VWVRLWQTQVRLGMVPYYLFVARDTGARHYFAIPLERCWQIYRQAIQKLSGLARTVRGPS 360

Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCI 337
           +  G GKV+I    + +VG     +
Sbjct: 361 MSAGPGKVEI--QGVAEVGQEKVFV 383


>gi|329765548|ref|ZP_08257124.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329137986|gb|EGG42246.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 455

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 82/384 (21%), Positives = 157/384 (40%), Gaps = 50/384 (13%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           +L+  TL + ++L     +  ++  E++ + N         +   LI+ +N PNDP+   
Sbjct: 15  RLKSYTLANFRELPQIQKMGAKKQFEMEVVGNVLPFKTNNYVIEQLIDWNNIPNDPMFVL 74

Query: 60  FIPQKEELNILPEER-------------------------EDPIGD--------NNHSPL 86
             PQ+  L      +                           P G          + + L
Sbjct: 75  TFPQRGMLIPEHYSKMESALKKGDKKEIQNTANEIRLQLNPHPAGQMELNVPTLKDGTKL 134

Query: 87  KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y +  L        C  YC FCFR            + ++ E  + Y++E  +I
Sbjct: 135 YGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDELKFAMREGEQLVQYLREHPEI 194

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PELI 197
            +V+FTGGDP+I+  K     +  L    + +++ +R  ++     P +        E++
Sbjct: 195 SDVLFTGGDPMIMKAKIFSTYINPLLEANLPNLRTIRIGTKALSYWPYKFLTEDDAEEML 254

Query: 198 QCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
              K     G  + +  H NH  E  ++    AI ++   G  + +QS LL+ INDD ++
Sbjct: 255 DIFKRVVDKGIHLAVMGHFNHLVELKTDAVKEAIKKIRATGAQIRTQSPLLRHINDDADM 314

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A + +  V+L   PYY+          +F +++ + Q+I     +K++GL +      +
Sbjct: 315 WAEMWKVQVQLGCIPYYMFVVRDTGAQHYFGISLIDAQRIFRDAYKKVTGLARTVRGPSM 374

Query: 314 PGGYGKVKIDTHNIKKVGNGSYCI 337
               GKV+I    I +V +  + +
Sbjct: 375 SATPGKVQIL--GITEVNDEKFMV 396


>gi|85118412|ref|XP_965436.1| hypothetical protein NCU02663 [Neurospora crassa OR74A]
 gi|28927245|gb|EAA36200.1| conserved hypothetical protein [Neurospora crassa OR74A]
          Length = 492

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 91/336 (27%), Positives = 154/336 (45%), Gaps = 51/336 (15%)

Query: 31  ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKG 88
            +   +I +TP I + IN  +P +DPIARQF+P K   L   P+   D + +   SP+KG
Sbjct: 170 AAATMAIRMTPYILSRINWLDPRHDPIARQFLPMKSIMLPDHPKLTLDSLHETADSPVKG 229

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +    P R                                +  E A AYI+ + ++ +++
Sbjct: 230 LASLKPTR--------------------------------RRWEEAFAYIESRPELQDIV 257

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL----- 200
            +GGD   L  ++L  + + L  + +++  RF S+   V P RI  E    +  L     
Sbjct: 258 VSGGDSYYLQPEQLTLIGERLISLPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISN 317

Query: 201 --KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
             K+AGK + +  H N P E S  +  A  +L   G+++ +Q+VLL+G+NDD E ++ L+
Sbjct: 318 KAKKAGKSMALHTHFNSPNEISWISSDASQKLFENGVMVRNQTVLLRGVNDDYETMSTLI 377

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
           R   +  I PYY++  DL     H R  ++    + A ++  I+G   P +++DLPGG G
Sbjct: 378 RQLADNNITPYYVYQCDLVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGG 437

Query: 319 KVKIDTHNIKKVGNGSYCI-------TDHHNIVHDY 347
           K    ++       G            D  + V++Y
Sbjct: 438 KRLACSYQSYDRDTGVSTFVAPAVTGRDKADKVYEY 473


>gi|271970119|ref|YP_003344315.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021]
 gi|270513294|gb|ACZ91572.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021]
          Length = 461

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 86/370 (23%), Positives = 158/370 (42%), Gaps = 52/370 (14%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
            R  T     DL     +  E+   I+ ++          + + LI+    P+DPI R  
Sbjct: 11  FRAYTAKHLDDLLLRAGLGDEERLRIRAVATVLPFRTNAYVVDQLIDWSAIPDDPIYRLV 70

Query: 61  IPQKEEL--------------------------------NILPEEREDP----IGDNNHS 84
            PQ + L                                N  P  + D     +G++   
Sbjct: 71  FPQADMLPEPDVTRLAGLLRAGAPNAEIQAAAREVRMRLNPHPAGQLDLNVPRVGED--- 127

Query: 85  PLKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           P+ G+ H+YP+ +L        C  YC +CFR      +     +S D +  + Y+++  
Sbjct: 128 PMPGMQHKYPETVLFFPKQGQTCHAYCTYCFRWAQFIGEPDLKFASDDVDNLVGYLKKHP 187

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL 200
           ++  V+FTGGDP+I+S   L++ L+ L  ++ ++ +R  ++     PQR   +P+    L
Sbjct: 188 RVTSVLFTGGDPMIMSESVLRRYLEPLLELEQLESIRIGTKSLAYWPQRFVSDPDAADTL 247

Query: 201 K------EAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
           +      +AGK +    H +HP E  S  A AA++ +   G ++ +Q+ L++ INDDP  
Sbjct: 248 RLFASVVDAGKNLAFMAHFSHPREMESPVAEAAVAGILATGAVIRTQAPLIRTINDDPAT 307

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            +++ R  + + + PYY+          +F + +    +I       +SGLC+      +
Sbjct: 308 WSSMWRRQLTMGMVPYYMFVERDTGPQDYFAVPLARAHEIFRDAYASVSGLCRTVRGPSM 367

Query: 314 PGGYGKVKID 323
               GKV +D
Sbjct: 368 SATPGKVCVD 377


>gi|167947045|ref|ZP_02534119.1| hypothetical protein Epers_11032 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 316

 Score =  294 bits (753), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 85/276 (30%), Positives = 157/276 (56%), Gaps = 11/276 (3%)

Query: 1   MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58
            Q  L+ + + S   L +   + +++ + ++E+   + + +     +L+N ++ NDPI +
Sbjct: 17  WQSELK-QNINSIDSLKHYIDLSEDEEEVLREVVGQHPMNIPRYYLSLLNEYDTNDPIRK 75

Query: 59  QFIPQKEELNI---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
             +P ++EL +   + E  +DP GD+ H+   G++H+YP   L+     C +YCR CFR+
Sbjct: 76  LALPSEDELIVAGSMGETTKDPYGDDKHNKGNGVLHKYPYSALIVATDYCSMYCRHCFRK 135

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
            +VG      +  ++ + A  YI+E  +I  VI +GGDPL+++ +R++K+L++L  I HV
Sbjct: 136 AIVGLPNDKTV--ENFQRAATYIREHKEITNVIISGGDPLLINTRRIKKILESLVDIDHV 193

Query: 176 QILRFHSRVPIVDPQR-INPELIQCLKEAGKP--VYIAIHANHPYEFSEEAIAAISRLAN 232
             +R  +R P+V P R  + +L++C +E  K   +Y+  H NH  E +  A  A+ R+  
Sbjct: 194 NYVRLGTRTPVVYPMRFFDDDLLKCFEEFNKHKTLYLPTHFNHANEITNIAKEAVLRIRQ 253

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
            G+ + +Q+VLL+G+ND    + NLM   V +  KP
Sbjct: 254 TGVTVNNQAVLLEGVNDSASDIENLMNGLVTIWRKP 289


>gi|239944852|ref|ZP_04696789.1| hypothetical protein SrosN15_27950 [Streptomyces roseosporus NRRL
           15998]
 gi|239991318|ref|ZP_04711982.1| hypothetical protein SrosN1_28712 [Streptomyces roseosporus NRRL
           11379]
 gi|291448314|ref|ZP_06587704.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998]
 gi|291351261|gb|EFE78165.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998]
          Length = 448

 Score =  293 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 76/370 (20%), Positives = 149/370 (40%), Gaps = 48/370 (12%)

Query: 12  QDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL-- 67
            ++     +    ++ ++ +S      +   + + LI+ H  P DPI +   PQ   L  
Sbjct: 23  DEVAARYGMSHSALETVRAVSRVLPFRVNDYVLSELIDWHRVPEDPIFQLVFPQHGMLRA 82

Query: 68  ------------------------------NILP-EEREDPIGDNNHSPLKGIVHRYPDR 96
                                         N  P  + E  +       L+GI H+Y + 
Sbjct: 83  EDEKLLVDLARARAPKREIAAEVRRIRAGLNPHPSGQMELNVPSLADDALEGIQHKYRET 142

Query: 97  ILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +L        C  YC +CFR            ++   E  + Y++    + +V+FTGGDP
Sbjct: 143 VLYFPQQGQTCHSYCTYCFRWAQFIGDADLRFAAPGPERLVEYLRCHPAVSDVLFTGGDP 202

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKP 206
           +++S +RL+  L+ +  ++ V+ +R  ++     PQR   +        L + +  +G+ 
Sbjct: 203 MVMSTERLRSHLEPVLSVETVRTVRIGTKAVAYWPQRFVSDADADDLLRLFEQVVASGRT 262

Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           + +  H +HP E  +  A  A+ R+   G ++  Q+ L+  +NDD    A L R  +   
Sbjct: 263 LAVMAHFSHPRELETATARRALGRVRATGAVVYCQAPLIAHVNDDARTWAELWRAELSAG 322

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
             PYY+          +F + + +G +I  +   K+ GL +      +    GKV +D  
Sbjct: 323 TVPYYMFVERDTGPRHYFEVPLTKGLEIFRTAYSKLPGLARTVRGPVMSATPGKVLVD-- 380

Query: 326 NIKKVGNGSY 335
            +++   G +
Sbjct: 381 GVEETAEGRF 390


>gi|108758698|ref|YP_632865.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
 gi|108462578|gb|ABF87763.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622]
          Length = 456

 Score =  293 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 83/372 (22%), Positives = 167/372 (44%), Gaps = 30/372 (8%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISN---HYSIALTPVIANLINPHN-PND 54
            Q +H T+ + ++L      L+  +  + ++         S+ + P + N +N  +   D
Sbjct: 51  WQRKH-TIKNLKELKATLGALLPDDLAESMERDQRERATMSLLVPPQMLNTMNLEDLWRD 109

Query: 55  PIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           P+ R  +P    +  E    P+   D + + +   ++G+ HRYP ++L ++L  CP YC 
Sbjct: 110 PVRRYMLPAYADRLTEWTNHPKASRDSLHEQDMWVVEGLTHRYPTKVLAEMLPTCPQYCG 169

Query: 111 FCFRREMVGSQKGTVLS-------SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C R ++VG+    V                L Y++    + +V+ +GGD   L  ++L+
Sbjct: 170 HCTRMDLVGNDVPQVSKHKFGIGPKDRYAQMLDYLRRTPTVRDVVVSGGDIANLPIQQLE 229

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANH 215
             + +L  I +++ +R  S+  +  PQ    +        L +   E G  + +  H NH
Sbjct: 230 PFVSSLMDIPNIRDIRLASKGLMAIPQHFLQDSVLQGLDRLAKKAVERGVDLALHTHVNH 289

Query: 216 PYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHH 273
             + +     A+ +L   G   + +Q VLL+G+ND P+ L +L  T ++  +I PYY + 
Sbjct: 290 AQQLTPLVGKAVRKLLEMGFRDVRNQGVLLRGVNDSPQALLDLCFTLLDHAKILPYYFYM 349

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHNIKKVGN 332
            D+   + H+RL++ + Q++   +   + G   P  + D+P   GK  +       +   
Sbjct: 350 CDMIPNSEHWRLSVAQAQQLQHDIMGYMPGFATPRIVCDVP-FVGKRWVHQVAEYDRERG 408

Query: 333 GSYCITDHHNIV 344
            SY   ++   +
Sbjct: 409 ISYWTKNYRTGI 420


>gi|312602176|ref|YP_004022021.1| lysine2,3-aminomutase [Burkholderia rhizoxinica HKI 454]
 gi|312169490|emb|CBW76502.1| LYSINE 2,3-AMINOMUTASE (EC 5.4.3.2) [Burkholderia rhizoxinica HKI
           454]
          Length = 459

 Score =  293 bits (750), Expect = 3e-77,   Method: Composition-based stats.
 Identities = 89/370 (24%), Positives = 152/370 (41%), Gaps = 48/370 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + +  T  S Q  +    + +   + +K IS          + + LIN    P+DPI R 
Sbjct: 9   KFKPYTRQSIQQAHQWATLPENLREAVKVISRVLPFRTNQYVLDTLINWERVPDDPIYRL 68

Query: 60  FIPQKEELNILPEER--------------------------EDPIGDNNHSP-------L 86
             P  + L                                   P G   H+        +
Sbjct: 69  TFPHSDMLPADEYATLRDLVLIKQDEAAIENEVRKIRMRMNPHPAGQMTHNVPILDGKRM 128

Query: 87  KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y + +L        C  YC FCFR       +G    +K +   +AY++  +++
Sbjct: 129 HGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMEGLKFDAKASNELVAYLRRHTEV 188

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------- 195
            +V+ TGGDPLI++ + L   ++ L    + H+Q +R  ++     PQR   +       
Sbjct: 189 TDVLITGGDPLIMNTRSLADYIEPLLSPELAHIQNIRIGTKSVAYWPQRFVTDKDADDLL 248

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253
            L + +  AGK + +  H NHP E   + A  A+ R+ ++G  L  QS L++ INDD + 
Sbjct: 249 WLFEKVVNAGKNLAVMGHYNHPVELRPDIAQKAVKRIVSSGATLRMQSPLIRHINDDAKA 308

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A L  T V L   PYY+          +F+L + +  +I  +  + +SGL +      +
Sbjct: 309 WAELWTTGVRLGAIPYYMFIERDTGPRQYFQLPLIKSYEIFQAAYQSVSGLSRTVRGPSM 368

Query: 314 PGGYGKVKID 323
               GKV +D
Sbjct: 369 SAFPGKVVVD 378


>gi|307133226|ref|YP_003885242.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937]
 gi|306530755|gb|ADN00686.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937]
          Length = 386

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 96/363 (26%), Positives = 161/363 (44%), Gaps = 21/363 (5%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND----PI 56
            Q ++                +E    I        + +TP  ANLI      D    P+
Sbjct: 24  WQQKNAIRDEPALRSACGGWSEEVAQHIANNLKDRKMQITPYYANLIRQAAYTDIVDNPL 83

Query: 57  ARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCF-- 113
            RQ +P   +  +   + E    + +H        H+Y +R++L++++ C  YC+FCF  
Sbjct: 84  WRQVVPFWHDDGVTGYDGESENWELSHEMKTPICQHKYDNRVILRMVNTCNSYCQFCFEA 143

Query: 114 -RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
            R   V S+K      K  + +L YI++  ++ EVI +GGDP++L+  +L + L  +R I
Sbjct: 144 LRTLKVDSEKENA-GRKAFQDSLDYIRQTPEVEEVILSGGDPMMLTDAKLDECLGAIRNI 202

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
           +   ++R HSR    +P RI   L+  L+         +H  HP E S+    A+ R+  
Sbjct: 203 RDSLLIRIHSRSLTFNPYRITDTLLDILQRHRVN-AFGVHVCHPLELSDAFRDAVKRIQQ 261

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEGQ 291
              I+ S   LL+G+ND+ E L +L      + +KPYYL+H    + G S ++ +I +  
Sbjct: 262 VVPIVFSNMPLLRGVNDNEETLKSLFIELYRMGVKPYYLYHFMPFSPGASEYKASIRDAI 321

Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHHNI 343
            I+  LK ++S +  P Y+  LP   GK  V +              G   Y  T+    
Sbjct: 322 AIMNRLKRRVSNIALPEYV--LPHAKGKFTVPLLSGVEEMPQFEDIDGRRFYRFTNWQGD 379

Query: 344 VHD 346
           V  
Sbjct: 380 VCR 382


>gi|297196895|ref|ZP_06914292.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083]
 gi|197711500|gb|EDY55534.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083]
          Length = 438

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 76/380 (20%), Positives = 149/380 (39%), Gaps = 48/380 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIARQ 59
           + R        D+     +  +  D I  +++     +   + + LI+  +P  DPI R 
Sbjct: 13  RFRAFGPRQIDDIARRYGLSPKIRDGIALLAHVLPFRVNEYVLDQLIDWTDPAQDPIFRL 72

Query: 60  FIPQKEEL--------------------------NILPEEREDPIGDNNHSP-------L 86
             PQ+  L                           I       P G   ++        L
Sbjct: 73  VFPQRGMLPEDDERSLESLVRSGAAKREMAAEVARIRAGLNPHPSGQREYNVPVHEGERL 132

Query: 87  KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y + +L        C  +C +CFR            ++   +  ++Y+ +  ++
Sbjct: 133 AGLQHKYRETVLYFPTQGQSCHSFCTYCFRWAQFVGDPSLRFAAPGPDRLVSYLHDHPEV 192

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196
            +V+ TGGDP+++S +RL   L+ L  ++ V  +R  ++     PQR   +        L
Sbjct: 193 SDVLVTGGDPMVMSTERLTGHLEPLLGVESVNTVRIGTKSLAYWPQRFVSDADADSLLRL 252

Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
            + +   GK V +  H  HP E  +     A+ R+   G ++  Q+ ++  INDD E  A
Sbjct: 253 FERIAATGKQVAVMAHFTHPRELRTARVTEAVRRIRATGAVVYCQAPMVAHINDDAETWA 312

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
           ++ ++ + L   PYY+          +F++ +    +I  +    + GL +      +  
Sbjct: 313 SMWKSELALGAVPYYMFVERDTGPYDYFKVPLARAMEIFHTAYRTLPGLARTVRGPVMST 372

Query: 316 GYGKVKIDTHNIKKVGNGSY 335
             GKV +D   ++ +G   Y
Sbjct: 373 TPGKVVVD--GVETLGGDRY 390


>gi|169608816|ref|XP_001797827.1| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15]
 gi|160701722|gb|EAT84959.2| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15]
          Length = 487

 Score =  292 bits (747), Expect = 9e-77,   Method: Composition-based stats.
 Identities = 91/342 (26%), Positives = 156/342 (45%), Gaps = 41/342 (11%)

Query: 14  LYNANLIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDPIARQFIPQKEELNIL 70
           L      K+  I++    +    +   +TP + + I+ +NP +DPI +QFIP    +   
Sbjct: 61  LLRKITHKEAFIEDAVAATKLAPMAIRITPHVLSRIDWNNPLDDPIRKQFIPLASCIIPD 120

Query: 71  PEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
            E  + D + +   S                      +YCRFC R   VG    TV    
Sbjct: 121 HEHLKLDSLEEEKDS----------------------LYCRFCTRSYAVGGGTDTVTKRP 158

Query: 130 D------TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
                   E    Y++    + +++ +GGD   L  + L ++ + L ++ +++ +RF S+
Sbjct: 159 QKPSLTRWEKVFEYVENCKDLKDIVVSGGDAYYLQPEDLLRMGRRLLHMDNIERVRFASK 218

Query: 184 VPIVDPQRINP---------ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
              V P RI           EL    +  GK V +  H NHP E +     A + L   G
Sbjct: 219 GLAVAPGRICEGDPWTEALIELSNLGRSLGKQVCLHTHINHPREITWVTKTAANYLFKHG 278

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
           +I+ +QSVLLKG+N+DP I+++L++    + I+PYY++  D+  G    R  ++E   + 
Sbjct: 279 VIVRNQSVLLKGVNNDPVIMSDLIQGLSSINIQPYYVYQCDMVQGIEDLRTPLQEIIDLD 338

Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
             L+  +SG   P +++DLPGG GK  + T    + G  +Y 
Sbjct: 339 KQLRGTLSGFMMPAFVIDLPGGGGKRLVSTMESYENGVATYR 380


>gi|167045081|gb|ABZ09744.1| putative Radical SAM superfamily protein [uncultured marine
           crenarchaeote HF4000_APKG8I13]
          Length = 449

 Score =  291 bits (746), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 79/386 (20%), Positives = 147/386 (38%), Gaps = 51/386 (13%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
           ++  TL + + +     + KE   E++ + N         +   LI+  N PNDP+    
Sbjct: 16  IKSYTLMNFRIIPQIQQMSKEDQFEMEVVGNVLPFKTNNYVVEQLIDWDNVPNDPMYVLT 75

Query: 61  IPQKEELNILPEER--------------------------EDPIGD--------NNHSPL 86
            PQK  L     ++                            P G          + + L
Sbjct: 76  FPQKGMLIPEHYDKMASTLSSGADKKEVQRVANDIRLQLNPHPAGQMELNVPQLRDGTKL 135

Query: 87  KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y +  L        C  YC FCFR            + ++ E  + Y++E  +I
Sbjct: 136 YGMQHKYDETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMREGEQLVQYLKEHPEI 195

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195
            +V+FTGGDP+I+           L    + +++ +R  ++     P +   +       
Sbjct: 196 SDVLFTGGDPMIMKASMFSVYTDALLDAKLPNLKTIRIGTKAISYWPYKFLTDSDADETL 255

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
              + + E+G  + I  H NH  E  ++    A+ R+   G  + +QS LL  INDD ++
Sbjct: 256 KNFEKIVESGTHLAIMAHFNHLVELSTDPIKEAVKRIRKTGAQIRTQSPLLAHINDDTDM 315

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A + +  V L   PYY+          +F + + + +KI      ++SGL +      +
Sbjct: 316 WAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRDAFRQVSGLARTVRGPSM 375

Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITD 339
               GKV +    + ++      +  
Sbjct: 376 SATPGKVHVL--GVSEINGQKVIVLQ 399


>gi|182412197|ref|YP_001817263.1| radical SAM domain-containing protein [Opitutus terrae PB90-1]
 gi|177839411|gb|ACB73663.1| Radical SAM domain protein [Opitutus terrae PB90-1]
          Length = 468

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 82/358 (22%), Positives = 149/358 (41%), Gaps = 48/358 (13%)

Query: 14  LYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL---- 67
           +     +  + +  ++ ++      +   +   LI+ +N P DP+ +   PQ   L    
Sbjct: 23  IPQLQRLPADTLLAMRAVAAVLPFRVNQYVVEELIDWNNLPADPMFQLTFPQPGMLAEAD 82

Query: 68  ----------------------------NILP-EEREDPIGDNNHSPLKGIVHRYPDRIL 98
                                       N  P  + E  +   +  PL G+ H+Y D +L
Sbjct: 83  LAKMMRLLADGADQPTIERAARQIQRRLNPHPAGQMELNVPYFDGQPLSGMQHKYRDTVL 142

Query: 99  LKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
                   C  YC +CFR            +S+  E+ +AY++E  ++  V+FTGGDPL+
Sbjct: 143 FFPSPGQTCHTYCTYCFRWPQFVGLDELKFASRQAESLVAYLKEHPEVSNVLFTGGDPLV 202

Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKP 206
           +    L++ ++ L    ++H+  +R  ++ P   P R   E        L   ++ AG+ 
Sbjct: 203 MRTAVLRRYIEPLLSPELEHISAIRIGTKSPAWWPYRFVNEPDSDDLLRLFDQVRAAGRH 262

Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           + I  H + P E  +  A AA+ R+ + G I+  Q+ L++ +NDD +  A+L R  V L 
Sbjct: 263 MAIMAHYSRPRELQTPVAQAALRRIKSTGAIVRCQAPLIRHVNDDADTWADLWRLQVRLG 322

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             PYY+          +F + +    +I      ++SGL +      +    GKV ID
Sbjct: 323 AVPYYMFVERDTGPKGYFEVPLARCYEIFQKAYRRVSGLERTVRGPSMSATPGKVIID 380


>gi|167042471|gb|ABZ07196.1| putative Radical SAM superfamily protein [uncultured marine
           crenarchaeote HF4000_ANIW133C7]
          Length = 447

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 79/386 (20%), Positives = 148/386 (38%), Gaps = 51/386 (13%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60
           ++  TL + + +     + +E   E++ + N         +   LI+  N PNDP+    
Sbjct: 16  IKTYTLINFRKIPQIQQMPEEVQFEMEVVGNVLPFKTNNYVVEQLIDWDNIPNDPMYVLT 75

Query: 61  IPQKEELNILPEER--------------------------EDPIGD--------NNHSPL 86
            PQK  L     ++                            P G          + + L
Sbjct: 76  FPQKGMLIPEHYDKMASTLRSGADKKEIARVANDIRLQLNPHPAGQMELNVPQLKDGTKL 135

Query: 87  KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y +  L        C  YC FCFR            + ++ E  + Y++E  ++
Sbjct: 136 YGMQHKYDETCLFFPSQSQTCHAYCTFCFRWPQFVGMDEMKFAMREGEQLVQYLKEHPEV 195

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195
            +V+FTGGDP+I+          TL    + +++ +R  ++     P +   +       
Sbjct: 196 TDVLFTGGDPMIMKASMFSAYTDTLLDAKLPNLKTIRIGTKAISYWPYKFLTDSDADETL 255

Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
              + + ++G  + I  H NH  E  ++    AI R+   G  + +QS LL  INDD  +
Sbjct: 256 KNFEKIVKSGTHLAIMAHFNHLVELSTDPIKEAIKRIRKTGAQIRTQSPLLAHINDDSSM 315

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
            A + +  V L   PYY+          +F + + + +KI  S   ++SGL +      +
Sbjct: 316 WAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRSAFRQVSGLARTVRGPSM 375

Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITD 339
               GKV +    + ++      +  
Sbjct: 376 SATPGKVHVL--GVSEINGQKVIVLQ 399


>gi|224368753|ref|YP_002602914.1| KamA3 [Desulfobacterium autotrophicum HRM2]
 gi|223691469|gb|ACN14752.1| KamA3 [Desulfobacterium autotrophicum HRM2]
          Length = 440

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 86/370 (23%), Positives = 148/370 (40%), Gaps = 48/370 (12%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58
           M+ +  T  + + L   N +  EQI  I+ +           + N LIN  +  NDP+  
Sbjct: 1   MRYKPYTNKNLKSLPQFNRLTPEQIFNIQVVGTVLPFKTNNYVVNELINWDDFENDPMFI 60

Query: 59  QFIPQKEEL--------------------------------NILPEERED-PIGDNNHSP 85
              PQ+E L                                N  P  + D  +   +   
Sbjct: 61  LNFPQREMLAKKHFNTMAALVKANASKERITMAANRIRHSLNPHPAGQIDKNVPVLDGQR 120

Query: 86  LKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           L GI H+Y + +L        C  +C FCFR        G   + KD +  + Y++ + +
Sbjct: 121 LNGIQHKYRETMLFFPTQGQTCHAFCSFCFRWPQFTGMDGHRFAMKDADLMVRYVRSQPE 180

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP------- 194
           + +++FTGGDPL +S K L   L  +    +  ++ +R  ++     P R          
Sbjct: 181 LTDILFTGGDPLTMSTKILSVYLNAIIDAKLPGIRTIRIGTKTLSFWPYRFTTDKDSAEL 240

Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
            EL + + +AG  + I  H NHP E  + E   A+  +   G ++ SQS +L  IN   +
Sbjct: 241 LELFKRVTDAGIHLAIMSHLNHPREIATPECKRAVEAIRGTGAVIRSQSPVLNRINASAK 300

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           I + + +  + L I PYY+          +F + + +  KI       +SG+ +      
Sbjct: 301 IWSKMWQDQISLGIVPYYMFVARNTGAQDYFSIPLVDTWKIFRDAYSSVSGISRTVRGPS 360

Query: 313 LPGGYGKVKI 322
           +    GK+KI
Sbjct: 361 MSASPGKIKI 370


>gi|27383343|ref|NP_774872.1| hypothetical protein bll8232 [Bradyrhizobium japonicum USDA 110]
 gi|27356518|dbj|BAC53497.1| bll8232 [Bradyrhizobium japonicum USDA 110]
          Length = 499

 Score =  286 bits (733), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 15/310 (4%)

Query: 40  TPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL 99
           T    + I      D +     P   E         D  G+++++ + G+ H+Y    LL
Sbjct: 175 TNFYRDQITNSGYYDQLKYIVEPTIAEFKSPG--SLDTSGEHDNTVVPGLQHKYAQTGLL 232

Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
            +   C  YCR+CFR+ +VG     +    D      YI    ++  V+ +GGDP +LS 
Sbjct: 233 LVTDRCASYCRYCFRKRIVGKDSDEIAP--DFARVAQYIAGHPEMTNVLLSGGDPFVLST 290

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI----NPELIQCLKEAGKPVYIAIHANH 215
            +L K+L  L  I H++ +RF +++    P+R      P L + + EAGK   I  H +H
Sbjct: 291 AKLGKILDHLLPIPHLESIRFGTKIVAFAPRRFEDPALPALFRRISEAGKTAVIVAHFDH 350

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
             E S +A   I  L   G+  L+QSVLL  +NDDPEILA       ++ ++PYYL    
Sbjct: 351 IGEISVDAERNIRALRAQGVQFLNQSVLLAKVNDDPEILAATFAKCHQMGVRPYYLFQGR 410

Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGS 334
              G SHF++++  G +I   +  ++SG+ +   YI  +    GK+++    +    +G 
Sbjct: 411 PVKGASHFQVSLRRGIEIARGINRRLSGIQKTFKYI--MSHYTGKIEV----LDLGADGR 464

Query: 335 YCITDHHNIV 344
             +  H N +
Sbjct: 465 VYMRYHQNKI 474


>gi|32967991|gb|AAP92506.1| lysine 2,3-aminomutase [Streptomyces vinaceus]
          Length = 445

 Score =  285 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 89/395 (22%), Positives = 162/395 (41%), Gaps = 49/395 (12%)

Query: 1   MQLRHKTLTSAQDLYNANL--IKKEQIDEIKEISNHYS---IALTPVIANLINPHNPND- 54
            Q R   + +A+ L       +  +  D++ E   H +   + +TP + N I P  P D 
Sbjct: 24  WQ-RAHCVKNARQLRAVVGDGLDDKFYDDLTEDQEHMATMAMLITPQMLNTIAPETPADS 82

Query: 55  ----------PIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100
                     P+ R  +P + +        P    D + +     ++G+  RYP ++L +
Sbjct: 83  DGYHDAFYADPVRRYMVPVRSDRDLRWPSHPLSSRDSLHEAEMWVVEGLTRRYPTKVLAE 142

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGD 153
           L+  CP YC  C R ++VG    +V   +         EA L +++    + +V+ +GGD
Sbjct: 143 LVATCPQYCGHCTRMDLVGGSTPSVDKQRLTLRPADRQEAILDHLRRTPGVRDVVVSGGD 202

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGK 205
              +   RL+  L  L  I  V+ +R  S+  +  PQ    P+++  L          G 
Sbjct: 203 VANVPWPRLESFLLRLLEIDSVRDIRLASKALVGLPQHWLQPQVVSGLENVAGVAARRGV 262

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE- 263
            + +  HANH    +         L +AG+  + +Q VL++G+ND    L +L     + 
Sbjct: 263 HLAVHTHANHVQSVTPLVAEGARALLDAGVRDVRNQGVLMRGVNDSTAALLDLCFALQDE 322

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             I PYY +  D+  G  H+R ++ E Q +  ++   + G   P  + D+P   GK  + 
Sbjct: 323 AGILPYYFYMCDMVPGAEHWRTSLAEAQDLQHAIMGYLPGYATPRIVCDVP-YVGKRWVH 381

Query: 324 --THNIKKVGNGSYC--------ITDHHNIVHDYP 348
                 ++ G   +         + D   +   YP
Sbjct: 382 QAVEYDRERGISYWTKNYRTAIELDDPDALTRRYP 416


>gi|115380256|ref|ZP_01467274.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
 gi|310822788|ref|YP_003955146.1| hypothetical protein STAUR_5549 [Stigmatella aurantiaca DW4/3-1]
 gi|115362735|gb|EAU61952.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1]
 gi|309395860|gb|ADO73319.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 456

 Score =  285 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 166/372 (44%), Gaps = 30/372 (8%)

Query: 1   MQLRHKTLTSAQDLYNA-NLIKKEQI----DEIKEISNHYSIALTPVIANLINPHN-PND 54
            Q +H T+ + ++L  A   +  E++    +  ++     S+ L P + N +N  +   D
Sbjct: 51  WQRKH-TVKNLRELRAALGPLLPEELAVSIERDQKERATMSVLLPPQMLNTMNLEDLWGD 109

Query: 55  PIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           P+ R  +P   +        P    D + +     ++G+ HRYP ++L ++L  CP YC 
Sbjct: 110 PVRRYMLPAFADRLTTWPNHPRASRDSLHEAEMWVVEGLTHRYPTKVLAEMLPTCPQYCG 169

Query: 111 FCFRREMVGSQKGTVLS-------SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C R ++VG+    V          +  E  L Y++    + +V+ +GGD   L  ++L+
Sbjct: 170 HCTRMDLVGNDVPQVEKHRFSIGPKERYEKMLDYLRRTPSVRDVVVSGGDIANLPIQQLE 229

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANH 215
             + +L  I +++ +R  S+  +  PQ    +        L +   E G  + +  H NH
Sbjct: 230 PFVSSLMDIPNIRDIRLASKGLMGIPQHFLQDSVLQGLDRLAKKAVERGVDLALHTHVNH 289

Query: 216 PYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHH 273
             + +     A+ +L + G   + +Q VLL+G+ND    L +L  T ++  +I PYY + 
Sbjct: 290 ARQLTPLVGKAVRKLLDMGFRDVRNQGVLLRGVNDSAPALLDLCFTLLDHAKILPYYFYM 349

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHNIKKVGN 332
            D+   + H+RL++ + Q +   +   + G   P  + D+P   GK  +       +   
Sbjct: 350 CDMIPNSEHWRLSVAQAQTLQHDIMGYMPGFATPRIVCDVP-FVGKRWVHQVAEYDRERG 408

Query: 333 GSYCITDHHNIV 344
            SY   ++   +
Sbjct: 409 ISYWTKNYRTGI 420


>gi|158335745|ref|YP_001516917.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina
           MBIC11017]
 gi|158305986|gb|ABW27603.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina
           MBIC11017]
          Length = 379

 Score =  285 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 89/309 (28%), Positives = 154/309 (49%), Gaps = 7/309 (2%)

Query: 18  NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77
             + +E  D I     H+   +    A LI+  +P DP+ +  +P   E +       D 
Sbjct: 29  LPLGEEDCDRITAAQTHFPFMVPEGYAQLIDWQDPTDPLRQLLLPSVYEQDDHG--SLDT 86

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
            G+   + + G+ H+Y    +L +   C  +CR+CFRR ++     T  + +D + A+AY
Sbjct: 87  SGETLSTVVPGLQHKYEQTAVLIVTQACAGHCRYCFRRRLMSKDVMTKETIEDLQGAIAY 146

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--PE 195
           IQ   +I  V+ +GGDP++ S +RL  +L  L  I H+  +R  +++P   P R    PE
Sbjct: 147 IQTHPEIDNVLMSGGDPMVSSTRRLANLLAALAEIPHLWQIRISTKLPAFLPSRFTSDPE 206

Query: 196 LIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
           L+Q L +      +    H +HP E +  A  A++ L NAG +L +Q  L++G+N   ++
Sbjct: 207 LLQVLAQYQERFQIVFQCHFDHPREITPAAEQALAVLRNAGCLLTAQIPLMQGVNSSVDV 266

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313
           +  L +    L + P YL HP       HF+L I EG K+V  L+++ +G     +   L
Sbjct: 267 METLFKRLHRLSVLPQYLFHPRPVKHALHFQLPILEGLKLVEGLRQRCNG-SVKRFRYIL 325

Query: 314 PGGYGKVKI 322
              +GK+++
Sbjct: 326 THEHGKLEL 334


>gi|134046377|ref|YP_001097862.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C5]
 gi|132664002|gb|ABO35648.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C5]
          Length = 594

 Score =  285 bits (731), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 82/359 (22%), Positives = 154/359 (42%), Gaps = 30/359 (8%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKE-ISNHYSIALTPVIANLINPHNP---NDPI 56
             + +  +T  + L +   + + +I  IK+   N     +TP   +L++  +    +  I
Sbjct: 195 WHMEN-NITDLETLQDLLDLSESEISSIKKACENSIPFGITPYYVSLMDETSSREFDHAI 253

Query: 57  ARQFIPQKEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
             Q IP    ++   E R      D +G+N+ SP+  +  RYP   ++K    C   C +
Sbjct: 254 RAQVIPPTRYVDKTLESRTRGNSLDFMGENDTSPVDLVTRRYPMIAIMKPYETCAQICVY 313

Query: 112 CFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           C R   +     K  +   +    A+ + +    I EV+ TGGDP +L  + L  +L   
Sbjct: 314 CQRNWQIKDVLSKDALAPKETVLNAIEWFKNHESIKEVLITGGDPALLDDEYLDWILSEF 373

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIA 225
             IKHV+ +R  +R+P+V PQRI    ++ L +  +P    + ++ H  H YE +++   
Sbjct: 374 SQIKHVERIRIGTRIPVVLPQRITKNFVEILAKYNEPGIREIAVSTHVEHVYEITKDVQE 433

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           A+S+L N G+ + +Q V     +   E  + L +    + I PYYL +      T  +R+
Sbjct: 434 AVSKLKNKGMSVYNQQVFTVENSRRFET-SALRKVLKLIGIDPYYLFNTKGKDETIDYRV 492

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            I    +  +     + G C             +      N+ K+G  +      H+++
Sbjct: 493 PIARALQERSEEARLLPGYC-------------RTDCTVFNVPKLGKNNLNYCQDHDLI 538


>gi|269126573|ref|YP_003299943.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183]
 gi|268311531|gb|ACY97905.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183]
          Length = 456

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 84/372 (22%), Positives = 156/372 (41%), Gaps = 33/372 (8%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISN---HYSIALTPVIANLINPHN---- 51
            Q R   + + + L      LI +    ++           + +TP + N ++       
Sbjct: 46  WQ-RAHCVKNIRQLQQVLGDLIDESFYADLHRDQTGHATMPMLVTPQMLNTMDTSTTEAF 104

Query: 52  PNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
             DP+ R  +P   +        P    D + + +   ++G+ HRYP ++L +LL  CP 
Sbjct: 105 YADPVRRYMLPVASDRRTDWPSHPCATRDSLHEADMWAVEGLTHRYPTKVLAELLSTCPQ 164

Query: 108 YCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
           YC  C R ++VG+    V   +         EA L Y++    + +V+ +GGD   L   
Sbjct: 165 YCGHCTRMDLVGTSTPAVAKHRFTARPADRHEAMLEYLRRTPTVRDVVVSGGDVANLPWP 224

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIH 212
           RL+  +  L  I  ++ +R  ++  +  PQ    +        L    +  G  + +  H
Sbjct: 225 RLEAFVDRLLDIDSIRDIRLATKALMALPQHWLQDEVRAGMERLAAKARRRGVALAVHTH 284

Query: 213 ANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYY 270
            N     +     A   L  AG+  + +Q VLL G+ND P  L +L    ++  +I PYY
Sbjct: 285 VNTARSLTPLVARAARGLLEAGVRDVRNQGVLLHGVNDSPAALLDLSFALLDEAQIMPYY 344

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHNIKK 329
           L+  D+  G+ H+RL +   Q++  ++   + G   P  + D+P   GK  +    +  +
Sbjct: 345 LYMCDMIPGSEHWRLPLWRAQELQHAIMGYLPGFATPRIVCDVP-YVGKRWVHQPADYDR 403

Query: 330 VGNGSYCITDHH 341
           +   SY   ++ 
Sbjct: 404 LRGISYWTKNYR 415


>gi|323456908|gb|EGB12774.1| hypothetical protein AURANDRAFT_70598 [Aureococcus anophagefferens]
          Length = 1879

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 81/347 (23%), Positives = 146/347 (42%), Gaps = 51/347 (14%)

Query: 22   KEQIDEIKEISNHYSIALTPVIAN-LINPH---NPN-DPIARQFIPQKEELNILPEERED 76
            +E + ++K  +  +    +P + + LI+     +   DP  +   P  + L+    E  D
Sbjct: 793  QENMQDVKRAALIFPFKASPYLVDELIDWDMEADIRTDPFYKLVFPTMDMLSDEHRELLD 852

Query: 77   PIGDNNH---------------SPLK---------------GIVHRYPDRILLKLL--HV 104
             + D                  +P                 G+ H+Y + +L        
Sbjct: 853  GVCDAGDPAAIKEAVEEIRESLNPHPAGQKALNAPKKAELTGVQHKYAETVLFFAAAAQT 912

Query: 105  CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
            C  YC +CFR            + KD ++   Y++E  ++ +++FTGGDP+I+  + L++
Sbjct: 913  CHAYCTYCFRWAQFIGDPDLRFAQKDADSLFDYLEEHPEVSDILFTGGDPMIMQTRMLKQ 972

Query: 165  VLKTLRY---IKHVQILRFHSRVPIVDPQRIN-----PELIQCLKE----AGKPVYIAIH 212
             L+  +    + H++ LR  +R     PQR        EL+  L+E     G+ + I  H
Sbjct: 973  YLEPFKDPTHLPHIKNLRIGTRALTFWPQRFTTDADADELMTLLREVKEIGGRHMAIMAH 1032

Query: 213  ANHPYEF-SEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
              H  E  +++   AI RL   G +I+ SQS +++GINDD ++ A   R  V L + PYY
Sbjct: 1033 LGHVRELSTDKVKHAIHRLKQEGGVIIRSQSPVMRGINDDADVWAAKWREEVRLGVIPYY 1092

Query: 271  LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
            +         S+F + +   Q++ A      SGLC+      +    
Sbjct: 1093 MFIARDTGAQSYFDVPLVRAQRLYADAIRATSGLCRTARGPSMSCTP 1139


>gi|150249481|gb|ABR67759.1| CmnP [Saccharothrix mutabilis subsp. capreolus]
          Length = 448

 Score =  285 bits (729), Expect = 8e-75,   Method: Composition-based stats.
 Identities = 83/382 (21%), Positives = 156/382 (40%), Gaps = 39/382 (10%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYS---IALTPVIANLINPHNPND- 54
            Q R   + + + L      L+ +   D++      ++   + L P + N + P    D 
Sbjct: 37  WQ-RVHCVRNTRQLRAVVGDLLDERFYDDLAADQESFATMSMLLPPQMLNTMVPEGAADF 95

Query: 55  -------PIARQFIPQKE----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103
                  P+ R  +P +     E    P    D + +     ++G+ HRYP ++L +L+ 
Sbjct: 96  TGAFYADPVRRYMLPVRSDRDPEWPSHPYSSRDSLHEAEMWVVEGLTHRYPTKVLAELVS 155

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLI 156
            CP YC  C R ++VG+    V   K         +  L Y++    + +V+ +GGD   
Sbjct: 156 TCPQYCGHCTRMDLVGNSTPQVRKHKLELKPVDRQDRMLDYLRRTPAVRDVVVSGGDVAN 215

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKPVY 208
           +   +L+  L  L  I+ V+ +R  ++     PQ             + +     G  + 
Sbjct: 216 VPWPQLESFLARLLEIETVRDIRLATKALAGLPQHWLQPQVVEGMSRVARTAASRGVNLA 275

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRI 266
           +  H NH    +     A   L +AG+  + +Q VL++G+N  P+ L  L      E  I
Sbjct: 276 VHTHVNHAQSVTPLVAEAARALLDAGVRDVRNQGVLMRGVNATPDDLLELCFALQGEANI 335

Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--T 324
            PYY +  D+     H+R ++ E Q + A++   + G   P  + D+P   GK  +    
Sbjct: 336 LPYYFYLCDMIPNAEHWRTSVAEAQDLQAAIMGYLPGYATPRIVCDVP-YVGKRWVHQVV 394

Query: 325 HNIKKVGNGSYCITDHHNIVHD 346
              +++G  SY   ++   +  
Sbjct: 395 EYDRELGV-SYWTKNYRTGIES 415


>gi|271498600|ref|YP_003331625.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
           Ech586]
 gi|270342155|gb|ACZ74920.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii
           Ech586]
          Length = 386

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 94/363 (25%), Positives = 157/363 (43%), Gaps = 21/363 (5%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP----NDPI 56
            Q ++                 E    I        + +TP  ANLI         ++P+
Sbjct: 24  WQQKNAIRDEPALRAACGGWSDEIAQRITHNLASRKMQITPYYANLIKDAGYKNIVDNPL 83

Query: 57  ARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCF-- 113
            RQ +P   +      + E    + +H        H+Y +R++L++++ C  YC+FCF  
Sbjct: 84  WRQVVPFWLDDGATGYDGESENWELSHEMKTPICQHKYDNRVILRMVNTCNSYCQFCFEA 143

Query: 114 -RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
            R   V S+K      K  + +L YI+    + EVI +GGDP++L+  +L + L  +R I
Sbjct: 144 LRTLKVDSEKENA-GRKAFQDSLNYIRNTPGVEEVILSGGDPMMLTDVKLDECLGAIRNI 202

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
           +   ++R HSR    +P RI   L+  L+         +H  HP E S+    A+ R+  
Sbjct: 203 RDSLLIRIHSRSLTFNPYRITDTLLDILRRHRVN-AFGVHVCHPLELSDAFRDAVKRIQQ 261

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEGQ 291
              I+ S   LL+G+ND+ + L  L      + +KPYYL+H    + G S ++ +I +  
Sbjct: 262 VVPIVFSNMPLLRGVNDNEDTLRQLFIELYRMGVKPYYLYHFMPFSPGASEYKASIRDAI 321

Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHHNI 343
            I+  LK ++S +  P Y+  LP   GK  V +              G   Y  T+    
Sbjct: 322 AIMNRLKRRVSNIALPEYV--LPHAKGKFTVPLLSSVQDMPQFEDIDGERFYRFTNWQGD 379

Query: 344 VHD 346
           V  
Sbjct: 380 VCR 382


>gi|302867587|ref|YP_003836224.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029]
 gi|315506013|ref|YP_004084900.1| lysine 2,3-aminomutase [Micromonospora sp. L5]
 gi|302570446|gb|ADL46648.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029]
 gi|315412632|gb|ADU10749.1| Lysine 2,3-aminomutase [Micromonospora sp. L5]
          Length = 468

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 81/380 (21%), Positives = 156/380 (41%), Gaps = 36/380 (9%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQ-----IDEIKEISNHYSIALTPVIANLINPHNP--- 52
            Q R   + + + L        ++     ++  ++     S+ + P + N + PH P   
Sbjct: 58  WQ-RVNCVKNIKQLRAVLGDTVDETFYADLEADQKALATMSMLVPPQMLNTMVPHQPMST 116

Query: 53  ----NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
                DPI R  IP   +        P    D + +++    +G+ HRYP ++L +LL  
Sbjct: 117 EALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLST 176

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           CP YC  C R ++VG+    V   K         +A + Y++    + +V+ +GGD   +
Sbjct: 177 CPQYCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHITYLKAHPGVRDVVVSGGDVANV 236

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGKPVYI 209
             + L+  L  L  I+ ++ +R  ++  +  PQ    P++++ L          G  + I
Sbjct: 237 PWRNLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDVVEGLERVARTAARRGVNLAI 296

Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267
             H NH    +     A     + G+  + +Q VL++G+N     L +L      E  I 
Sbjct: 297 HTHVNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVNATSADLLDLCFALQGEAGIL 356

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHN 326
           PYY +  D+     H+R+ +   Q++   +   + G   P  + D+P   GK  +    +
Sbjct: 357 PYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMLTD 415

Query: 327 IKKVGNGSYCITDHHNIVHD 346
             +    SY   ++   +  
Sbjct: 416 YDRERGISYWTKNYRTSIES 435


>gi|302340485|ref|YP_003805691.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM
           11293]
 gi|301637670|gb|ADK83097.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 461

 Score =  284 bits (727), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 77/386 (19%), Positives = 151/386 (39%), Gaps = 52/386 (13%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + R  +  +   +     + K Q+ E++ ++          +   LI+    P DP+ + 
Sbjct: 5   RFRPYSAANIDSITQLKRLPKSQLREMQAVAKILPFRTNNYVVEELIDWSRIPEDPLFQL 64

Query: 60  FIPQKEE----------------------------------LNILPEERED-PIGDNNHS 84
             PQ +                                   +N  P  +    + +    
Sbjct: 65  TFPQPQMLHKSDLRRITELLATETGYSPEQLKSEQYRIRTAMNPHPAGQLQLNVPEEEGE 124

Query: 85  PLKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
            L G+ H+Y + +L        C  YC +CFR       K   ++S + E  + Y+    
Sbjct: 125 VLHGMQHKYDETVLFFPKQGQTCHAYCTYCFRWAQFIGNKELQMASGEVEPLIRYLDRHP 184

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINPE----- 195
           ++ +++ TGGDP+ +    L++ ++ L   +  ++Q +R  ++     P R   +     
Sbjct: 185 EVSDLLITGGDPMFMRSSVLRRYIEPLLRHRPGNLQTIRIGTKSLSYWPYRYLSDKDSDD 244

Query: 196 ---LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
              L   +  AG  + I  H  H  E  +    AAI R+   G I+  QS +++ INDD 
Sbjct: 245 LISLFHEITTAGYHLSIMAHFTHIRELSTLAVEAAIRRIKETGAIIRCQSPIVRHINDDA 304

Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
            + A + R  V+L + PYY+         ++F + I E  K+ +    ++SGL +     
Sbjct: 305 SMWAEMWRREVQLGMIPYYMFIARDTGPKAYFDIPIAETLKLFSDAYRQVSGLARTVRGP 364

Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCI 337
            +    GK+ +D   I ++    Y +
Sbjct: 365 SMSAKPGKILVD--GITEIEGEKYFV 388


>gi|134045650|ref|YP_001097136.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
 gi|150403695|ref|YP_001330989.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C7]
 gi|132663275|gb|ABO34921.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5]
 gi|150034725|gb|ABR66838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus
           maripaludis C7]
          Length = 594

 Score =  283 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 85/359 (23%), Positives = 152/359 (42%), Gaps = 30/359 (8%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEI-SNHYSIALTPVIANLINPH---NPNDPI 56
            QL +  + S + L N   +   + + I++   N+    +TP   +L++       +  +
Sbjct: 195 WQLENVVINS-KTLENLVALSVSEKNAIEKARQNNIPFGITPYYVSLMDNTTDRKYDHAV 253

Query: 57  ARQFIPQKEELNILP-----EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
             Q IP    +          E  D +G+ + SP+  +  RYP   ++K    C   C +
Sbjct: 254 RAQVIPPLNYVEKTAEARNSGESLDFMGETDTSPVDLVTRRYPMIAIMKPYETCAQICVY 313

Query: 112 CFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           C R   +     K  +   +  E A+ + +    I EV+ TGGDP ILS + L  +L   
Sbjct: 314 CQRNWQIKDVFSKNALAKKESVENAIEWFRNNESIKEVLLTGGDPGILSEEYLAYLLSEF 373

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIA 225
             IKH++ +R  +R P+V PQRI  E  + L    +P    V ++ H  H YE +++   
Sbjct: 374 SEIKHLERIRIGTRTPVVLPQRITDEFTEVLGHYNEPGIREVAVSTHIEHVYEVTKDLKD 433

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           A+S+L N GI + +Q V     +   E  + L +    + I+PYYL +      T ++R+
Sbjct: 434 AVSKLKNNGIYVYNQQVFTVENSRRFET-SALRKALKLVGIEPYYLFNTKGKEETVNYRV 492

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            I    +        + G C             +      N+ K+G  +      H+++
Sbjct: 493 PIARALQERKEEARLLPGYC-------------RTDSTVFNVPKLGKNNLNFYQDHDLI 538


>gi|107027427|ref|YP_624938.1| hypothetical protein Bcen_5091 [Burkholderia cenocepacia AU 1054]
 gi|116693862|ref|YP_839395.1| lysine 2,3-aminomutase YodO family protein [Burkholderia
           cenocepacia HI2424]
 gi|105896801|gb|ABF79965.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia AU 1054]
 gi|116651862|gb|ABK12502.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia HI2424]
          Length = 396

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 98/366 (26%), Positives = 162/366 (44%), Gaps = 24/366 (6%)

Query: 1   MQLRHKTLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLI-------NPHNP 52
            Q R+ T+     L  A      E    I+   N   + +TP    LI       +    
Sbjct: 31  WQQRN-TIREEASLREACGGWSDELSSHIQSNLNGRKLQITPYYLRLIRESQGDTDADIV 89

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRF 111
            +P+ RQ +P   +  +   + E    +  H        H+Y +R++L++++ C  YC+F
Sbjct: 90  RNPLWRQVVPFWSDEIVGGYDGESENWELAHEMKTPICQHKYDNRVILRMVNTCNSYCQF 149

Query: 112 CFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           CF   R +  + + T  S      ++AYI++   I EVI +GGDPL+LS  +L + L  L
Sbjct: 150 CFEALRTLEVNSEKTNASRDTFGESVAYIKQNPAIEEVILSGGDPLMLSDAKLDEHLSAL 209

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
           R +    ++R HSR    +P R+  +L+  L+         +H  HP E S     A+ R
Sbjct: 210 RDVGRDLLIRIHSRSLTFNPYRVTDQLVAMLERHRVN-AFGVHVCHPDELSPAFTDAVKR 268

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIE 288
           + +A  I+ S    L+GINDD E L  L        +KPYYL+H    + G S ++ +I 
Sbjct: 269 IRSAVPIVFSNMPFLRGINDDEETLHRLFIELYRRGVKPYYLYHFMPFSPGASVYKASIR 328

Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGK--VKID------THNIKKVGNGSYCITDH 340
           +  +I+  LK ++S +  P Y+  LP   GK  V +          ++      Y   + 
Sbjct: 329 DAIRIMNRLKRRVSNVAMPEYV--LPHAKGKFTVPLFEGQGDIPQFVETGEQRIYRFVNW 386

Query: 341 HNIVHD 346
                D
Sbjct: 387 QGETCD 392


>gi|148255106|ref|YP_001239691.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
 gi|146407279|gb|ABQ35785.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
          Length = 460

 Score =  283 bits (724), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 81/367 (22%), Positives = 148/367 (40%), Gaps = 46/367 (12%)

Query: 3   LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQF 60
           L+   L     L     I    + +++ +       +   + + LI+   P+ DP  R  
Sbjct: 29  LKLYGLQHIDILRRYRDIPDRALHDMRVVGQVLPFRVNNYVLDELIDWAEPDEDPFYRLT 88

Query: 61  IPQKEEL------------------------------NILPE-EREDPIGDNNHSPLKGI 89
           +  +  L                              N  P  +    + +   S + G+
Sbjct: 89  MLDRHMLDPADFDALERALRVGGSAPVEVTAAIHRRFNPHPGRQMTMNMPELGGSGVSGL 148

Query: 90  VHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
            H+Y +  L+       C  YC FCFR       +   +++ +++  +AYI+E  +I +V
Sbjct: 149 QHKYAETCLVFPASGQTCAAYCSFCFRWPQFIGNRDLRMATDESQRFVAYIKEHKEISDV 208

Query: 148 IFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELI-------- 197
           + TGGDPLI+    L++ L  L    + HV  +R  +++    P R   +          
Sbjct: 209 LLTGGDPLIMRASVLRRYLLPLLGADLAHVTTIRIGTKMLGFWPYRFTTDDDADDLIALL 268

Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
           + +  +G+ + I +H +HP E  +  A  A+ RL + G +L SQS +++G+NDD  I   
Sbjct: 269 EEVVRSGRHLAIMLHISHPRELETAAARRAVQRLLSTGAVLRSQSPVVRGVNDDARIWQE 328

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           L    V   I PYY+         + F + +    +I      ++SGL +      +   
Sbjct: 329 LWSREVRQGIVPYYMFVLRDTGPRAFFEVPLARALEIYRGGIRQVSGLARSARGPIMSTD 388

Query: 317 YGKVKID 323
            GKV +D
Sbjct: 389 MGKVAVD 395


>gi|284031530|ref|YP_003381461.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM
           17836]
 gi|283810823|gb|ADB32662.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM
           17836]
          Length = 490

 Score =  281 bits (721), Expect = 8e-74,   Method: Composition-based stats.
 Identities = 79/386 (20%), Positives = 168/386 (43%), Gaps = 37/386 (9%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEI---KEISNHYSIALTPVIANLINPHNPND- 54
            Q R   + + + L +    L+++   +++   +      S+ L P + N I P    D 
Sbjct: 54  WQ-RSHCVKNVKQLRDVMGDLLEERVYEDLTRDQAERATMSMLLPPQMLNTIVPQGAADY 112

Query: 55  -------PIARQFIPQ----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103
                  P+ R  +P     + +    P    D + ++     +G+ HRYP ++L ++L 
Sbjct: 113 TEAFYADPVRRYMLPMFTDRRTDWPSHPHATRDSLHEHEMWATEGLTHRYPTKVLAEVLP 172

Query: 104 VCPVYCRFCFRREMVGSQKG-------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            CP YC  C R ++VG+          T+   +  +  L Y++    + +V+ +GGD   
Sbjct: 173 TCPQYCGHCTRMDLVGNSTPVIDKLKFTIKPQQRLDDMLDYLRRTPGVRDVVVSGGDVAN 232

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ--------CLKEAGKPVY 208
           +   RL+  L +L  I++++ +R  ++  +  PQ    + ++          ++ G  V 
Sbjct: 233 MPWPRLEAFLTSLLEIENIRDIRLATKALMGMPQHWLSDDVRAGVERVATIARQRGVMVA 292

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRI 266
           +  H N     +     A   + +AG+  + +Q VL++G+ND    L +L    ++   I
Sbjct: 293 MHTHVNAAQSVTPLVAEATKAMFDAGLRDVRNQGVLMRGVNDSVPQLLDLCFALLDGATI 352

Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTH 325
            PYY +  D+   + H+R+++++ Q +   +   + G   P  + D+P   GK  +    
Sbjct: 353 TPYYFYMCDMIPFSEHWRVSVKDAQHLQHGILGYLPGFATPRIVCDVP-YVGKRWVHQLS 411

Query: 326 NIKKVGNGSYCITDHHNIVHDYPPKS 351
           +  +V   SY   ++   +    P++
Sbjct: 412 DYDEVRGISYWKKNYRTGIEQQDPEA 437


>gi|90423562|ref|YP_531932.1| radical SAM family protein [Rhodopseudomonas palustris BisB18]
 gi|90105576|gb|ABD87613.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18]
          Length = 480

 Score =  281 bits (721), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 77/361 (21%), Positives = 149/361 (41%), Gaps = 48/361 (13%)

Query: 10  SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQKEEL 67
           +  +L     +  +   EI  ++          +  NLI+    P+DPI +   PQ+  L
Sbjct: 22  NLSELPEWQRLDAQLRREIDIVARVLPFRTNRYVVENLIDWSRVPDDPIFQLVFPQRGML 81

Query: 68  NILPEEREDPIGDNNH---------------------------------SPLKGIVHRYP 94
           + +  +    + +++                                   PL G+ H+Y 
Sbjct: 82  SEVDFDDVRTLVESSDDSEALARAVERIRRRLNPHPGGQLTHNTATLAGRPLPGVQHKYR 141

Query: 95  DRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           + ++        C  YC +CFR       +G  + ++ T   +AY++   +I +V+ TGG
Sbjct: 142 ETVVFFPAQGQTCHAYCTYCFRWAQFVGMQGMRIETRSTSELVAYLRAHPEITDVLITGG 201

Query: 153 DPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKE 202
           DP+I++ + L++ ++ L    + H+Q +R  ++     P R   +        L + +  
Sbjct: 202 DPMIMATRTLRRYIEPLLVPELSHIQNIRIGTKSVAYWPHRFVSDADADDCLRLFEEVAA 261

Query: 203 AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           A + + I  H  HP E     A  AI R+ + G  +  Q+ L++ +ND PE+ + L RT 
Sbjct: 262 ANRHLAIMGHYTHPVELHPALAREAIRRIRDTGAQIRMQAPLIRHVNDAPELWSELWRTG 321

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
           V L + PYY+          +F + +    +I       +SGL +      +    GK++
Sbjct: 322 VRLGLIPYYMFIERDTGPRDYFSVPLVRAHEIFRRAAANVSGLARAAQGPTMSVLPGKIR 381

Query: 322 I 322
           I
Sbjct: 382 I 382


>gi|302531882|ref|ZP_07284224.1| lysine 2,3-aminomutase [Streptomyces sp. AA4]
 gi|302440777|gb|EFL12593.1| lysine 2,3-aminomutase [Streptomyces sp. AA4]
          Length = 460

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 72/358 (20%), Positives = 149/358 (41%), Gaps = 48/358 (13%)

Query: 14  LYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL---- 67
           +     +  +   +I  +S+     +   + + LI+    P+DPI R   P K+ L    
Sbjct: 44  IPQVRSLGPDIRRDISVVSSVLPFKVNNYVVDELIDWSAVPDDPIFRLTFPHKDMLPADM 103

Query: 68  ----------------------------NILPEER-EDPIGDNNHSPLKGIVHRYPDRIL 98
                                       N  P ++    +  +    ++G+ H+Y + +L
Sbjct: 104 YDEVAALQARGLRPAELRRAVAPMRERLNPHPGDQLTKNVPQDGSGVVRGLQHKYAETVL 163

Query: 99  LKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +   H   C  YC +CFR        G      D +  + Y++   ++ +V+FTGGDP+I
Sbjct: 164 VFPSHGQTCHAYCGYCFRWAQFVGMPGLKQQVDDNDRIVDYLRSHREVSDVLFTGGDPMI 223

Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PELIQCLKE---AGKP 206
           ++   L++ ++ L     +H++  RF ++     P R        +L++  ++   +G+ 
Sbjct: 224 MTTDVLRQYVEPLLGPGFEHLRNFRFGTKALSYWPYRFTTDPDSDDLLRLFEQIVGSGRH 283

Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
           V +  H +H  E  ++    A+ R+ + G ++  Q+ +++ +ND+    A + R  V L 
Sbjct: 284 VAVMAHFSHARELGTDAVARAMRRIRDTGAVVRVQAPIVRHVNDNAPAWAEMWRQSVRLG 343

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             PYY+          +F L + +   I     +++SGL +      +    GKV +D
Sbjct: 344 AVPYYMFVERDTGAREYFALPLAQVVDIYRDAFKQVSGLERTARGPVMSASPGKVALD 401


>gi|288916751|ref|ZP_06411125.1| conserved hypothetical protein [Frankia sp. EUN1f]
 gi|288351825|gb|EFC86028.1| conserved hypothetical protein [Frankia sp. EUN1f]
          Length = 457

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 76/372 (20%), Positives = 153/372 (41%), Gaps = 52/372 (13%)

Query: 14  LYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL---- 67
           L  A L   +++   + ++      +   + + LI+    P+DPI R   PQ + L    
Sbjct: 28  LERAGLAGPDRL-MARAVAAVLPFRVNDYVVDALIDWDAAPDDPIYRLVFPQPDMLPAEQ 86

Query: 68  ----------------------------NILP-EEREDPIGDNNHSPLKGIVHRYPDRIL 98
                                       N  P  +RE  + +   + L G+ H+YP+ +L
Sbjct: 87  VAPIAQLLARGAPTREVQAAAAAVRAALNPHPAGQRELNVPELAGTRLDGLQHKYPETVL 146

Query: 99  LKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
                   C  YC +CFR      +    ++S++ +  + Y++   ++ +V+ TGGDP++
Sbjct: 147 YFPAHGQTCHAYCTYCFRWAQFVQEPHLRMASRNVDDLVTYVRAHPEVTDVLITGGDPMV 206

Query: 157 LSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGK 205
           +S + L + +  L       H+Q +R  ++     P R            L + +  +G+
Sbjct: 207 MSAEMLARCVLPLLDEPGLGHLQSIRIGTKSLSYWPARFVTDPGADDTLRLFERVVASGR 266

Query: 206 PVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
            + +  H +HP E   +    A+ R+ + G ++ +Q  +++ +NDD    A + +  V L
Sbjct: 267 SLALMAHYSHPRELETDVAEHAVRRVLSTGAVIRTQGPVIRSVNDDAGAWAAMWQRQVRL 326

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
            + PYY+          +F + +    +I ++    +SGL +      +    GKV +D 
Sbjct: 327 GMVPYYMFVERDTGPRGYFEVALLRAYEIFSAAYRSVSGLARTVRGPVMSATPGKVVVD- 385

Query: 325 HNIKKVGNGSYC 336
             +  VG   Y 
Sbjct: 386 -GVHTVGAEKYI 396


>gi|300786612|ref|YP_003766903.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32]
 gi|299796126|gb|ADJ46501.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32]
          Length = 456

 Score =  280 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 90/390 (23%), Positives = 170/390 (43%), Gaps = 42/390 (10%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEI---KEISNHYSIALTPVIANLINPH---NP 52
            Q R   + +A+ L      L+++   D++   +      S+ L P + N + P    +P
Sbjct: 42  WQ-RVHCVRNAKQLRALMGDLLEERFYDDLLADQRELATMSMLLPPQMLNTMAPTAGTDP 100

Query: 53  N--------DPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100
                    DPI R  +P + +        P    D + +     ++G+ HRYP ++L +
Sbjct: 101 AKVTEAFYADPIRRYMLPVRSDRDATWPSHPHSERDSLHEAEMWVVEGLTHRYPTKVLAE 160

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGD 153
           ++  CP YC  C R ++VG+   TV   K         +A +AY+++   + +V+ +GGD
Sbjct: 161 MISTCPQYCGHCTRMDLVGNSTETVEKHKLTLKPVDRQDAMIAYLKKTPGVRDVVVSGGD 220

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGK 205
              +   +L+  L  L  I  V+ +R  ++     PQ    P++++ L       +  G 
Sbjct: 221 VANVPWPQLESFLMRLMDIDTVRDIRLATKALAALPQHWLQPKVVEGLERVAVTAQRRGV 280

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-E 263
            + I  H NH    +     A     N G+  + +Q VL++G+N  P  L +L      E
Sbjct: 281 NLAIHTHVNHAQSVTPLVAEAAQTALNVGVRDVRNQGVLMRGVNATPAALLDLCFALQGE 340

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             I PYY +  D+     H+R+++ E Q++  S+   + G   P  + D+P   GK  + 
Sbjct: 341 ANILPYYFYMCDMIPNAEHWRVSVWEAQELQHSIMGYLPGYATPRIVCDVP-YVGKRWVH 399

Query: 324 --THNIKKVGNGSYCITDHHNIVHDYPPKS 351
                 +++G  SY   ++   +    P++
Sbjct: 400 QLAEYDRELGI-SYWTKNYRTGIEHSDPEA 428


>gi|330468030|ref|YP_004405773.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032]
 gi|328811001|gb|AEB45173.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032]
          Length = 467

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 80/375 (21%), Positives = 153/375 (40%), Gaps = 36/375 (9%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQ-----IDEIKEISNHYSIALTPVIANLINPHNP--- 52
            Q R   + + + L        ++     ++  +      S+ + P + N + P  P   
Sbjct: 57  WQ-RVNCVKNVKQLRTVLGDTVDESFYADLEADQRAMATMSMLVPPQMINTMVPFAPPST 115

Query: 53  ----NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
                DPI R  IP   +        P    D + +++    +G+ HRYP ++L +LL  
Sbjct: 116 EALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLAT 175

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           CP YC  C R ++VG+    V   K         +A + Y++    + +V+ +GGD   +
Sbjct: 176 CPQYCGHCTRMDLVGNSTPAVDKLKLSLKPVDRYDAHITYLKAHPGVRDVVVSGGDVANV 235

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGKPVYI 209
             + L+  L  L  I+ ++ +R  ++  +  PQ    P++++ L          G  + I
Sbjct: 236 PWRNLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDVVEGLERVARTAARRGVNLAI 295

Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267
             H NH    +     A     + G+  + +Q VL++G+N   + L +L      E  I 
Sbjct: 296 HTHVNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVNATSKDLLDLCFGLQGEAGIL 355

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHN 326
           PYY +  D+     H+R+ +   Q++   +   + G   P  + D+P   GK  +     
Sbjct: 356 PYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMVTE 414

Query: 327 IKKVGNGSYCITDHH 341
             +    SY   ++ 
Sbjct: 415 YDRERGISYWTKNYR 429


>gi|256376813|ref|YP_003100473.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
 gi|255921116|gb|ACU36627.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
          Length = 450

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 77/367 (20%), Positives = 149/367 (40%), Gaps = 45/367 (12%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59
           + R        ++      + + ++ ++ IS      +   + + LI+    PNDPI + 
Sbjct: 13  RFRSLGPHHVDEVAARYAPRADLMEAVRVISQVLPFRVNEYVLSHLIDWARVPNDPIFQL 72

Query: 60  FIPQKEELNILPE-ERED------------------------PIGDN-------NHSPLK 87
             PQ+  L    E E  D                        P G         +   L 
Sbjct: 73  VFPQRGMLAEDDERELADLLRAKDKRGLRLAVERVRGGLNPHPAGQKELNVPMLDGEVLP 132

Query: 88  GIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           G+ H+Y +  L        C  YC +CFR            ++   E  + Y+++   + 
Sbjct: 133 GVQHKYRETALYFPQQGQTCHAYCTYCFRWAQFVGDADLRFAAPGPELLVRYLRQHPAVT 192

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LI 197
           +V+ TGGDP+I+S +RL+  L+ L  +  V+ +R  ++     P R   +        L 
Sbjct: 193 DVLVTGGDPMIMSTERLRSHLEPLLAVDTVRTIRIGTKSVAYWPHRFTTDPDADEVLRLF 252

Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
           + +  +G+ + +  H +HP E  +++A AA++R+   G ++  Q+ L+K +NDD  + A+
Sbjct: 253 ERVVASGRSLAVMAHFSHPRELETDQARAALARIRATGAVVYCQAPLIKHVNDDSRVWAD 312

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316
           + R  +   + PYY+          +F++ +     I       + GL +      +   
Sbjct: 313 MWRGELSAGLVPYYMFVERDTGPREYFKVPLARAVDIFQGAYRTLPGLARTVRGPSMSAT 372

Query: 317 YGKVKID 323
            GKV +D
Sbjct: 373 PGKVLVD 379


>gi|330003195|ref|ZP_08304561.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3]
 gi|328537036|gb|EGF63321.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3]
          Length = 195

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 71/190 (37%), Positives = 104/190 (54%)

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           + YI    Q+ E+IF+GGDPL+     L  ++  L  I HV+ LR HSR+PIV P RI  
Sbjct: 1   MDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRIHSRLPIVIPARITE 60

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
            L    + +   V +  H NH  E   E  AA++ L  AG+ LL+QSVLL+G+ND+ + L
Sbjct: 61  TLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTL 120

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           A+L     +  + PYYLH  D   G +HF ++ +E ++I+  L   ISG   P    ++ 
Sbjct: 121 ADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTLISGYMVPKLAREIG 180

Query: 315 GGYGKVKIDT 324
           G   K  +D 
Sbjct: 181 GEPSKTPLDL 190


>gi|145594793|ref|YP_001159090.1| radical SAM domain-containing protein [Salinispora tropica CNB-440]
 gi|145304130|gb|ABP54712.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440]
          Length = 491

 Score =  280 bits (716), Expect = 3e-73,   Method: Composition-based stats.
 Identities = 82/376 (21%), Positives = 156/376 (41%), Gaps = 38/376 (10%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKK---EQIDEIKEISNHYSIALTPVIANLINPHN---- 51
            Q  +  + + + L      L+ +     ++  ++     S+ +TP + N + P      
Sbjct: 81  WQRTN-CVKNIKQLRTVLGDLVSETFYADLEADQKALATMSMLVTPQMLNTMVPFESMST 139

Query: 52  ---PNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
                DPI R  IP   +        P    D + +++    +G+ HRYP ++L +LL  
Sbjct: 140 DALYADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLST 199

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           CP YC  C R ++VG+    +   K         +A ++Y++    + +V+ +GGD   +
Sbjct: 200 CPQYCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHISYLKAHPGVRDVVVSGGDVANV 259

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PELIQCL-------KEAGKPVYI 209
             K L+  L  L  I  V+ +R  ++  +  PQ     ++++ L          G  + I
Sbjct: 260 PWKNLETYLMRLLDIDTVRDIRLATKALMGLPQHWLRADVVEGLERVARTAARRGVNLAI 319

Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267
             H NH    +     A     + G+  + +Q VL++G+N     L +L      E  I 
Sbjct: 320 HTHVNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVNATTPDLLDLCFALQGEAGIL 379

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--TH 325
           PYY +  D+     H+R+ +   Q++   +   + G   P  + D+P   GK  +   T 
Sbjct: 380 PYYFYMCDMIPNAEHWRVPVGHAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMLTE 438

Query: 326 NIKKVGNGSYCITDHH 341
             ++ G  SY   ++ 
Sbjct: 439 YDQERGI-SYWTKNYR 453


>gi|218508047|ref|ZP_03505925.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Brasil 5]
          Length = 198

 Score =  279 bits (715), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 117/198 (59%), Positives = 157/198 (79%)

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+LS +RL+++++ L  I HV+I+RFH+RVP+VDP++I+  LI  LK +GK VY+A+HA
Sbjct: 1   PLVLSPRRLREIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHA 60

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           NHP E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHH
Sbjct: 61  NHPRELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHH 120

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333
           PDLA GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK  I    I+  G+G
Sbjct: 121 PDLAPGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVISESVIRATGDG 180

Query: 334 SYCITDHHNIVHDYPPKS 351
            Y ++D+    H YPP  
Sbjct: 181 CYSVSDYRGGEHSYPPAG 198


>gi|150399938|ref|YP_001323705.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
           SB]
 gi|150012641|gb|ABR55093.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii
           SB]
          Length = 594

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 87/359 (24%), Positives = 157/359 (43%), Gaps = 30/359 (8%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEI-SNHYSIALTPVIANLINP--HNPND-PI 56
             +++  +T ++ L N   + + +   I++   N+    +TP   +L++      ND  +
Sbjct: 195 WHIKN-IVTDSKTLENLVRVSELEKYSIEKARENNIPFGITPYYVSLMDNSLDRRNDHAV 253

Query: 57  ARQFIPQKEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
             Q IP    +    E R      D +G+++ SP+  +  RYP   ++K    C   C +
Sbjct: 254 RAQVIPPVRYVEKTIEARSSGKNLDFMGESDTSPVDLVTRRYPMIAIMKPYETCAQICVY 313

Query: 112 CFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           C R   +        + S +    A+ +  E   I E++ TGGDP ILS++ L  +L   
Sbjct: 314 CQRNWQIKDVFSDNVLASKESVNNAINWFNENECIKELLLTGGDPAILSNEYLDYLLSEF 373

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIA 225
             IKH++ +R  +R P+  PQRI  E  + L +  KP    + I+ H  H YE + +   
Sbjct: 374 SKIKHLERIRIGTRTPVALPQRITNEFSEILGKYNKPGVREIAISTHVEHVYEVTADLRD 433

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           AISRL N+GI + +Q V     +   E  + L +    + I+PYYL +      T+++R+
Sbjct: 434 AISRLKNSGITVYNQQVFTIENSRRFET-SALRKVLKLIGIEPYYLFNTKGKEETTNYRV 492

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344
            I    +        + G C             +      N+ K+G  +      H+++
Sbjct: 493 PIARALQERKEEARLLPGYC-------------RTDSTVFNVPKLGKNNLNFYQDHDVI 538


>gi|224007663|ref|XP_002292791.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana
           CCMP1335]
 gi|220971653|gb|EED89987.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana
           CCMP1335]
          Length = 533

 Score =  279 bits (714), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 78/347 (22%), Positives = 141/347 (40%), Gaps = 50/347 (14%)

Query: 27  EIKEISNHYSIALTPVIAN-LINPHNPN---DPIARQFIPQKEELNI-------LPEERE 75
           ++K     +    +P   + LI+  + +   DP  R   P  + L+           E  
Sbjct: 121 DVKLAGMVFPFKASPYYVDELIDWESEDVRQDPFYRLVFPTLDMLSDEHRMKLEAAYEEG 180

Query: 76  DP-----------------------IGDNNHSPLKGIVHRYPDRILLKLL--HVCPVYCR 110
           DP                       +       L G+ H+Y + +L+       C  YC 
Sbjct: 181 DPKNLIRTVEEIRSDLNPHPAGQKTLNAPKDDSLTGVQHKYSETVLVFPSAGQTCHAYCT 240

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +CFR            + K+ ++   Y+ +  ++ +++ TGGDP+++  K L + L+ L 
Sbjct: 241 YCFRWAQFIGDDELRFAQKEAKSLFDYLSKHEEVSDILMTGGDPMVMKTKSLARYLEPLT 300

Query: 171 Y---IKHVQILRFHSRVPIVDPQRIN-----PELIQCLK----EAGKPVYIAIHANHPYE 218
               + H++ +R  +R     PQR        E+I+ L+    E G+ V +  H +H  E
Sbjct: 301 DPNFLPHIKNIRIGTRSLSFWPQRFTTDDDADEVIELLRRVREEGGRHVAVMAHLSHARE 360

Query: 219 F-SEEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             +++  AAI R+   A   + SQS +++GIND  ++ A   RT V + I PYY+     
Sbjct: 361 LSTDKVKAAIQRIQKEAFATIRSQSPVMRGINDSSDVWAEKWRTEVNMGIIPYYMFLARD 420

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
                 F + +    KI +      SGL +      +    GKV++ 
Sbjct: 421 TGAQQFFDVPMATAHKIYSDALRNCSGLIRTARGPSMSCTPGKVEVT 467


>gi|291301420|ref|YP_003512698.1| lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728]
 gi|290570640|gb|ADD43605.1| Lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728]
          Length = 475

 Score =  278 bits (713), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 89/396 (22%), Positives = 162/396 (40%), Gaps = 50/396 (12%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNH---YSIALTPVIANLINPH----N 51
            Q R   + +   L       +     D++    +     S+ L P + N I P      
Sbjct: 41  WQ-RVHCVKNVAQLRGVLGDRVDDAFYDDLAADGDKRATMSMLLPPQMLNTIAPTLETTA 99

Query: 52  P--------NDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL 99
           P         DPI R  +P    ++ +    P    D + +++    +G+ HRYP ++L 
Sbjct: 100 PGSWTEAYYADPIRRYMLPVFSDRRTDWPSHPHATRDSLHEHDMWVAEGLTHRYPTKVLA 159

Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLS-------SKDTEAALAYIQEKSQIWEVIFTGG 152
           +LL  CP YC  C R ++VG+   T+             +A + Y+Q    + +V+ +GG
Sbjct: 160 ELLSTCPQYCGHCTRMDLVGNSTPTIDKLKLKLKPMARYDAMIEYLQSHPGVRDVVVSGG 219

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAG 204
           D   +  K L+  +  L  I+ ++ +R  ++  +  PQ    +        +    +E G
Sbjct: 220 DVANVPWKNLENFISRLLEIESIRDIRLATKALMGLPQHWLQDDVVDGMGRVATVARERG 279

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV- 262
             + I  H NH    +     A   + +AG+  + +Q VL+ G+N+ PE L +L      
Sbjct: 280 VNLAIHTHVNHVQSLTPTVARAARAMLDAGVRDVRNQGVLMNGVNNSPEALLDLCFALQG 339

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           E  I PYY +  D+   + H+R ++ E Q +  ++   + G   P  I D+P   GK  +
Sbjct: 340 EANILPYYFYMCDMIPNSEHWRTSVSEAQALQTAIMGYLPGYATPRIICDVP-FVGKRWV 398

Query: 323 DTHNIKKVGNG-SYCITDHHNIV---------HDYP 348
                    +G SY   ++   +          +YP
Sbjct: 399 HQVGRYDAEHGISYWTKNYRTSIEAADPDALTREYP 434


>gi|302527347|ref|ZP_07279689.1| CmnP protein [Streptomyces sp. AA4]
 gi|302436242|gb|EFL08058.1| CmnP protein [Streptomyces sp. AA4]
          Length = 463

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 87/391 (22%), Positives = 162/391 (41%), Gaps = 45/391 (11%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEI---KEISNHYSIALTPVIANLINPH---NP 52
            Q R   + + + L      L++    +++   +      S+ L P + N + PH   +P
Sbjct: 49  WQ-RVHCVRNVKQLRALMGDLLEDRFYEDLLADQREMATMSMLLPPQMINTMAPHAGTDP 107

Query: 53  N--------DPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100
                    DPI R  +P + + +      P    D + +     ++G+ HRYP ++L +
Sbjct: 108 AKVTEAFYADPIRRYMLPVRSDRHPAWPSHPHAERDSLHEAEMWVVEGLTHRYPTKVLAE 167

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGD 153
           ++  CP YC  C R ++VG+    +   K         +A   Y++    + +V+ +GGD
Sbjct: 168 MISTCPQYCGHCTRMDLVGNSTEQIEKHKLALKPVDRQDAMTDYLKRTPGVRDVVVSGGD 227

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-----INPELIQCL---KEAGK 205
              +   +L+  L  L  I+ V+ +R  ++     PQ      +   L +     +  G 
Sbjct: 228 VANVPWPQLESFLMRLMDIETVRDIRLATKALAALPQHWLQPKVTEGLQRVALTAQARGV 287

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-E 263
            + I  H NH    +     A       G+  + +Q VL++G+ND P  L +L      E
Sbjct: 288 NLAIHTHVNHAQSVTPLVAEAARTALQVGVRDVRNQGVLMRGVNDTPAALLDLCFALQGE 347

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             I PYY +  D+     H+R+ + E Q++  S+   + G   P  + D+P   GK  + 
Sbjct: 348 ANILPYYFYMCDMIPNAEHWRVAVWEAQELQHSIMGYLPGYATPRIVCDVP-YVGKRWV- 405

Query: 324 THNIKKVGNG---SYCITDHH-NIVHDYPPK 350
            H + +       SY   ++   I H+ P  
Sbjct: 406 -HQLAEYDRDLGISYWTKNYRTGIEHEDPEA 435


>gi|325122955|gb|ADY82478.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus PHEA-2]
          Length = 226

 Score =  278 bits (711), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 77/222 (34%), Positives = 120/222 (54%), Gaps = 2/222 (0%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
           +   C V+CR+CFRR     +   +  ++D      YI+    I E+I +GGDPL LS++
Sbjct: 1   MTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIEANPNINEIILSGGDPLTLSNR 58

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
           +L   L+ L  +K +QILR HSRVPIV P RI+ +LI  LK +   + + +H+NH  E  
Sbjct: 59  KLALWLERLSSLKQIQILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLVVHSNHASELD 118

Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
           +   + + +L++  I +L+Q+VLLKG+ND  + L +L     E R+ PYYLH  D   G 
Sbjct: 119 DFTCSKLLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYLHVLDKVKGA 178

Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            HF L   +   I   +   + G   P  + ++ G   K  +
Sbjct: 179 QHFDLESSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 220


>gi|159037977|ref|YP_001537230.1| lysine 2,3-aminomutase [Salinispora arenicola CNS-205]
 gi|157916812|gb|ABV98239.1| Lysine 2,3-aminomutase [Salinispora arenicola CNS-205]
          Length = 467

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 80/375 (21%), Positives = 153/375 (40%), Gaps = 36/375 (9%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKK---EQIDEIKEISNHYSIALTPVIANLINPHNP--- 52
            Q R   + + + L      L+ +     ++  ++     S+ + P + N + P  P   
Sbjct: 57  WQ-RANCVKNIKQLRAVLGDLVSETFYADLEADQKALATMSMLVPPQMLNTMVPFAPMTT 115

Query: 53  ----NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
                DPI R  IP   +        P    D + +++    +G+ HRYP ++L +LL  
Sbjct: 116 EALYADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLST 175

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           CP YC  C R ++VG+    +   K         +A + Y++    + +V+ +GGD   +
Sbjct: 176 CPQYCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHITYLKAHPGVRDVVVSGGDVANV 235

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PELIQCL-------KEAGKPVYI 209
             + L+  L  L  I+ V+ +R  ++  +  PQ     ++++ L          G  + I
Sbjct: 236 PWRNLESYLMRLLDIETVRDIRLATKALMGLPQHWLRADVVEGLERVARTAARRGVNLAI 295

Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267
             H NH    +     A     + G+  + +Q VL++G+N     L +L      E  I 
Sbjct: 296 HTHVNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVNATTPDLLDLCFALQGEAGIL 355

Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHN 326
           PYY +  D+     H+R+ +   Q++   +   + G   P  + D+P   GK  +     
Sbjct: 356 PYYFYLCDMIPNAEHWRVPVGYAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMLTE 414

Query: 327 IKKVGNGSYCITDHH 341
             +    SY   ++ 
Sbjct: 415 YDRERGISYWTKNYR 429


>gi|119716886|ref|YP_923851.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614]
 gi|119537547|gb|ABL82164.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614]
          Length = 468

 Score =  277 bits (710), Expect = 1e-72,   Method: Composition-based stats.
 Identities = 85/386 (22%), Positives = 164/386 (42%), Gaps = 43/386 (11%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKE----QIDEIKEISNHYSIALTPVIANLINPHN--- 51
            Q  H  K +   ++L     + +E     ++  +      S+ + P + N + PH    
Sbjct: 53  WQRAHCVKNVRQLREL--LGDLVEERFYADLERDQAERATMSMLVPPQMMNTMVPHEVPA 110

Query: 52  ---------PNDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98
                      DP+    IP    ++ +    P    D + +++    +G+ HRYP ++L
Sbjct: 111 GPGSLTEAFYADPVRHYMIPVFSDRRTDWPSHPHATRDSLHEHDMWVAEGLTHRYPTKVL 170

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTG 151
            +LL  CP YC  C R ++VG+   T+   K            L Y++   Q+ +V+ +G
Sbjct: 171 AELLPTCPQYCGHCTRMDLVGNSTPTIDKLKFVAKPNDRLGDMLDYLRRTPQVRDVVVSG 230

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC--------LKEA 203
           GD   L   RL+  L  L  I++++ +R  ++  +  PQ    E ++          +  
Sbjct: 231 GDVANLPWPRLEDFLTRLLEIENIRDIRLATKALVGLPQHWLQEDVRAGMARVAGTARSR 290

Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV 262
           G  + I  HANH    +     A + +  AG+  + +Q VLL G+N  P+ L +L    +
Sbjct: 291 GVSLAIHTHANHANSITPLVADATAAMFEAGVRDVRNQGVLLNGVNAGPDALLDLCFRLL 350

Query: 263 E-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
           +  +I PYY +  D+   + H+R+++ + Q++   +   + G   P  + D+P   GK  
Sbjct: 351 DGAQIMPYYFYMCDMIPFSEHWRVSVADAQRLQHHIMGYLPGFATPRIVCDVP-FVGKRW 409

Query: 322 I-DTHNIKKVGNGSYCITDHHNIVHD 346
           +    +       SY   ++   +  
Sbjct: 410 VHQVADYDTERGISYWTKNYRTSIET 435


>gi|94271846|ref|ZP_01292023.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
 gi|93450322|gb|EAT01561.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
          Length = 572

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 81/358 (22%), Positives = 141/358 (39%), Gaps = 32/358 (8%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLIN------PHNPN 53
            Q++ + +     L     + +E+   +     N     +TP   +L++          +
Sbjct: 170 WQIK-QIIRELDPLAKLVRLTEEEKQALALARENRLPFGITPYYLSLMDDELDGRAGGRD 228

Query: 54  DPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
             I  Q +P        L        D +G+ + SP + I  RYP   +LK  + CP  C
Sbjct: 229 ASIRAQVLPPLSYVQGVLATDNSASLDFMGEEDTSPFELITRRYPAICILKPFNTCPQIC 288

Query: 110 RFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
            +C R   +     KG        EAA+ +I E   I EV+ TGGDPL + ++RL ++++
Sbjct: 289 VYCQRNWEIDEVMAKGAFAGWPRIEAAIQWIHEHPSIHEVLITGGDPLAMGNERLARIME 348

Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEA 223
            +  I  ++ +R  +R  +  P R    L+  L    +P    V +  H  HPYE + + 
Sbjct: 349 RVAAIPTIERIRIGTRTLVTMPMRFTEGLLSLLARHRQPGRREVAVVTHVQHPYEITPDL 408

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
             A++RL   GI + +Q V     +   E  A L R    + I PYY  +      T+ +
Sbjct: 409 AEAVNRLRLRGIPVYNQLVYTFYASRRFEA-AALRRQLRLIGIDPYYTFNTKGKDETAAY 467

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
           R+ I    +        + GL             G+      N+ + G       ++ 
Sbjct: 468 RVPIARLIQEQQEEARLLPGL-------------GRTDEAVFNVPRQGKCYLRAREYR 512


>gi|94264369|ref|ZP_01288160.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
 gi|93455198|gb|EAT05414.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1]
          Length = 598

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 82/358 (22%), Positives = 141/358 (39%), Gaps = 32/358 (8%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLIN------PHNPN 53
            Q++ + +     L     + +E+   +     N     +TP   +L++          +
Sbjct: 196 WQIK-QIIRELDPLDRLVRLTEEEKQALALARENRLPFGITPYYLSLMDDELDGRAGGRD 254

Query: 54  DPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
             I  Q +P        L        D +G+ + SP + I  RYP   +LK  + CP  C
Sbjct: 255 ASIRAQVLPPLSYVQGVLATDNSASLDFMGEEDTSPFELITRRYPAICILKPFNTCPQIC 314

Query: 110 RFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
            +C R   +     KG        EAA+ +I E   I EV+ TGGDPL + ++RL ++++
Sbjct: 315 VYCQRNWEIDEVMAKGAFAGWPRIEAAIQWIHEHPSIHEVLITGGDPLAMGNERLARIME 374

Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEA 223
            +  I  ++ +R  +R  +  P R    L+  L    +P    V +  H  HPYE + E 
Sbjct: 375 RVAAIPTIERIRIGTRTLVTMPMRFTEGLLSLLARHRQPGRREVAVVTHVQHPYEITPEL 434

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
             A++RL   GI + +Q V     +   E  A L R    + I PYY  +      T+ +
Sbjct: 435 AEAVNRLRLRGIPVYNQLVYTFYASRRFEA-AALRRQLRLIGIDPYYTFNTKGKDETAAY 493

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
           R+ I    +        + GL             G+      N+ + G       ++ 
Sbjct: 494 RVPIARLIQEQQEEARLLPGL-------------GRTDEAVFNVPRQGKCYLRAREYR 538


>gi|326331434|ref|ZP_08197724.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium
           Broad-1]
 gi|325950690|gb|EGD42740.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium
           Broad-1]
          Length = 465

 Score =  276 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 88/381 (23%), Positives = 167/381 (43%), Gaps = 42/381 (11%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKE---ISNHYSIALTPVIANLI-----NPH 50
            Q R   + + + L      L+++    ++++        S+ + P + N +     +  
Sbjct: 50  WQ-RVNCIKNVRQLRALMGDLLEERFYADLEKDMAERATMSMLVPPQMVNTMVVSTSSTT 108

Query: 51  NPN--------DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98
           +P+        DPI    IP    ++ +    P+   D + +++    +G+ HRYP ++L
Sbjct: 109 DPSEFTDAFYADPIRHYMIPVFSDRRTDWPSHPQASRDSLHEHDMWVAEGLTHRYPTKVL 168

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTG 151
            +LL  CP YC  C R ++VG+    +   K         EA L Y++   Q+ +V+ +G
Sbjct: 169 AELLSTCPQYCGHCTRMDLVGNSTPVIDKLKLTGKPVDRHEAMLDYLRNTPQVRDVVVSG 228

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-LIQ-------CLKEA 203
           GD   L   RL+  L  L  I +++ +R  ++  I  PQ    E L++         +E 
Sbjct: 229 GDVANLPWPRLEDFLTKLMAIDNIRDIRLATKGLIGLPQHWLQEPLLEGMSRVTSIARER 288

Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV 262
           G  + +  HANH    +     A   L  AG+  + +Q VLL G+N D   L +L    +
Sbjct: 289 GVSLAVHTHANHANSVTPLVAEASKALMAAGVRDVRNQGVLLAGVNADSHSLLDLCFRLL 348

Query: 263 E-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
           +  +I PYY +  D+   + H+R+++ + Q++   +   + G   P  + D+P   GK  
Sbjct: 349 DGAQIMPYYFYMCDMIPFSEHWRVSVADAQRMQHDIMGYLPGFATPRIVCDVP-FVGKRW 407

Query: 322 I-DTHNIKKVGNGSYCITDHH 341
           +    +       SY   ++ 
Sbjct: 408 VHQLADYDTERGISYWTKNYR 428


>gi|317124916|ref|YP_004099028.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043]
 gi|315589004|gb|ADU48301.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043]
          Length = 483

 Score =  276 bits (707), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 86/383 (22%), Positives = 159/383 (41%), Gaps = 44/383 (11%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKK---EQIDEIKEISNHYSIALTPVIANLINPHN---- 51
            Q R   + + + L +    L+       ++  +      S+ + P + N + P      
Sbjct: 39  WQ-RVNCVRNVKQLRSLMGDLLDDRFYTDLERDQAERATMSMLVPPQMLNTMVPATSAAM 97

Query: 52  -----------PNDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
                        DPI R  +P    ++ +    P    D + +++    +G+ HRYP +
Sbjct: 98  PASGADFTEAFYADPIRRYMLPVFSDRRTDWPSHPFSSRDSLHEHDMWVAEGLTHRYPTK 157

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIF 149
           +L +LL  CP YC  C R ++VG+    V   K         +A LAY++    + +V+ 
Sbjct: 158 VLAELLPTCPQYCGHCTRMDLVGNSTPQVNKLKFDLKPVDRYDAMLAYLRNTPSVRDVVV 217

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--------QCLK 201
           +GGD   +  K L+  L  L  I +++ +R  ++  +  PQ    + +           +
Sbjct: 218 SGGDVANMPWKNLESFLDRLLEIDNIRDIRLATKALMGLPQHWFADDVVEGVARVAATAR 277

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRT 260
             G  + I  H N+    +     A   +  AG+  + +Q VL++GIND  E L +L   
Sbjct: 278 ARGVSLAIHTHVNNAQSVTPAVARASRAMLEAGVRDVRNQGVLMRGINDSTEQLLDLCFA 337

Query: 261 FVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
             +   I PYY +  D+     H+RL++ E Q++  S+   + G   P  + D+P   GK
Sbjct: 338 LADGASITPYYFYMCDMIPFAEHWRLSLAEAQRLQHSIMGYLPGFATPRIVCDVP-FVGK 396

Query: 320 VKIDTHNIKKVGNG-SYCITDHH 341
             +   +      G SY   ++ 
Sbjct: 397 RWVHQQDEYDTERGISYWRKNYR 419


>gi|297570169|ref|YP_003691513.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926084|gb|ADH86894.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 594

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 80/364 (21%), Positives = 145/364 (39%), Gaps = 28/364 (7%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIA 57
            Q+RH  +   + L     +   + + +     H     +TP   +L++      +  I 
Sbjct: 196 WQIRH-IVRELETLEKLVKLSDSEREAVALARKHKLPFGITPYYLSLMDDELGGRDASIR 254

Query: 58  RQFIPQKEELNILPEERE----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
            Q +P    +  +   ++    D +G+ + SP   I  RYP   +LK  + CP  C +C 
Sbjct: 255 AQVLPPMNYVQGVLAVKDPSCLDFMGEEDTSPFDLITRRYPAICILKPYNTCPQICVYCQ 314

Query: 114 RREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           R   +      G     +  + A+ +I +   I EV+ TGGDPL + ++ L ++++ +  
Sbjct: 315 RNWEIDEVMAPGAFAGMEKIKEAIDWIHDHPAIHEVLITGGDPLAMGNETLAEIIERVAA 374

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAI 227
           I  V+ +R  +R  +  P R    L   +    +P    V +  H  HPYE + E + A+
Sbjct: 375 IPTVERIRLGTRTLVTMPMRFTEGLAGLIARHHRPGRREVAVMTHVQHPYEITPEMVEAV 434

Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
           +RL   GI + +Q V    I+   E  A L R      I PYY  +      T  +R+ I
Sbjct: 435 NRLRQLGIPVYNQLVYTFFISRRFEA-ACLRRQLRLSGIDPYYTFNTKGKDETIGYRVPI 493

Query: 288 EEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
               +        + GL             G+      N+ + G       ++ N++   
Sbjct: 494 ARLIQEQEEEARLLPGL-------------GRTDEAVFNVPRQGKSYLRAREYRNLLAIK 540

Query: 348 PPKS 351
           P  +
Sbjct: 541 PNGA 544


>gi|257056184|ref|YP_003134016.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017]
 gi|256586056|gb|ACU97189.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017]
          Length = 459

 Score =  275 bits (704), Expect = 8e-72,   Method: Composition-based stats.
 Identities = 92/390 (23%), Positives = 164/390 (42%), Gaps = 43/390 (11%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYS---IALTPVIANLINPH---NP 52
            Q R   + + + L      L+++   D++       +   + L P + N + PH   +P
Sbjct: 47  WQ-RVHCVRNIKQLRAVMGDLLEERFYDDLAADQQQMATMSMLLPPQMLNTMAPHAGTDP 105

Query: 53  N--------DPIARQFIPQKE----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100
                    DPI R  +P       E    P  + D + +     ++G+ HRYP ++L +
Sbjct: 106 AKVTEAFYADPIRRYMLPVHSDRHPEWPSHPHSQRDSLHEAEMWVVEGLTHRYPTKVLAE 165

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGD 153
           LL  CP YC  C R ++VG+    V   +         +A + Y++    + +V+ +GGD
Sbjct: 166 LLSTCPQYCGHCTRMDLVGNSTPQVDKHRLTLKPVDRQDAMIDYLKRTPGVRDVVVSGGD 225

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGK 205
              +   +L+  L  L  I+ V+ +R  S+     PQ    P++++ L       +  G 
Sbjct: 226 VANVPWHQLEAFLMRLLDIETVRDIRLASKALAGLPQHWLQPKVVEGLARVAGTARRRGV 285

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-E 263
            + I  H NH    +     A       G+  + +Q VL++G+N  P  L +L      E
Sbjct: 286 NLAIHTHINHVQSVTPLVAEATRAALEVGVRDVRNQGVLMRGVNATPADLLDLCFALQGE 345

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             I PYY +  D+     H+RL + E Q++  ++   + G   P  + D+P   GK  + 
Sbjct: 346 ANILPYYFYMCDMIPNAEHWRLAVWEAQELQHAIMGYLPGYATPRIVCDVP-YVGKRWVH 404

Query: 324 --THNIKKVGNGSYCITDHH-NIVHDYPPK 350
                 ++ G  SY   ++   I HD P  
Sbjct: 405 QVAEYDRERGV-SYWTKNYRTGIEHDDPEA 433


>gi|300722010|ref|YP_003711290.1| hypothetical protein XNC1_1003 [Xenorhabdus nematophila ATCC 19061]
 gi|297628507|emb|CBJ89074.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061]
          Length = 389

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 24/365 (6%)

Query: 1   MQLRHKTLTSAQDL-YNANLIKKEQIDEIKEISNHYSIALTPVIANLI-NPHNPND---- 54
            Q ++  L   + L         E    I++      + +TP   + I       D    
Sbjct: 26  WQQKN-ALRDEESLRIACGGWNDEITRRIQQNLQGQKMQITPYYLSRILTTSQSGDITTN 84

Query: 55  PIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
           P+ RQ +P   E  +   + E    +           H+Y +R++L++++ C  YC+FCF
Sbjct: 85  PLWRQVVPFWNEEKLNGYDGESENWELKEEMKTPICQHKYDNRVILRMVNACNSYCQFCF 144

Query: 114 ---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
              R   V S K         + +L YI+    + EVI +GGDPL+L+  +L + L  +R
Sbjct: 145 EALRTLKVNSDKSNA-GRTSFQQSLEYIKNTPSVEEVILSGGDPLMLTDSKLDESLAAIR 203

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            I+   ++R HSR    +P RI   L++ LK+        +H  HP+E SEE   A+  +
Sbjct: 204 EIREDLLIRVHSRALTFNPYRITDALLEILKKHRVN-SFGVHICHPHELSEEFQHAVRCI 262

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEE 289
            +   I+ S    L+GIND+ EIL  L  +   + +KPYYL+H    + G+S ++ +I +
Sbjct: 263 QSVVPIVFSNMPFLRGINDNEEILHKLFISLYRIGVKPYYLYHFMPFSPGSSEYKASIND 322

Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHH 341
              I+  LK ++S +  P Y+  LP   GK  V +        +     G   Y   +  
Sbjct: 323 AIAIMGKLKRRVSNIALPEYV--LPHMKGKFTVPLFTNPGEMPYFETINGRRYYRFINWR 380

Query: 342 NIVHD 346
           N   +
Sbjct: 381 NEQCE 385


>gi|147919038|ref|YP_687235.1| hypothetical protein RRC148 [uncultured methanogenic archaeon RC-I]
 gi|110622631|emb|CAJ37909.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 633

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 86/361 (23%), Positives = 156/361 (43%), Gaps = 28/361 (7%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPI 56
            Q++H  LT  + +     + +++I  +K    H   + +TP   +L N       +  +
Sbjct: 236 WQMKH-ILTDYKTISELVRLDQDEISALKFAQEHNIPVQITPYYLSLFNKAGRSALDRAV 294

Query: 57  ARQFIPQKEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
             Q +P       + + R+     D +G+   SP++GI  RYP  ++LK    CP  C +
Sbjct: 295 RAQVLPSMNYCKTIVKNRQSAADMDFMGEKWTSPVEGITRRYPQILILKPYDSCPQICVY 354

Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           C R   + S     +     + A+ +I++   I EV+ TGGDPL ++ + +  +L+ +  
Sbjct: 355 CQRNWEIKSIDEAEVKRDTIQNAIQWIKDNESISEVLITGGDPLTMNDQYIDSLLRKVSG 414

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAI 227
           I HV+ LR  +R P+  P RI P+L + LK+  +P    V +  H  HP E + E++ A+
Sbjct: 415 IDHVERLRIGTRTPVTVPFRITPKLAEILKQYHQPGAREVCVVTHFEHPMEMTPESLQAV 474

Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287
             +  AG+ + +Q V     N     +A + +      + PYY  +      T  FR+ I
Sbjct: 475 QTIRQAGMSVYNQQVFTYY-NSRKFEIAKMRKVLKICGVDPYYTFNTKGKEETMDFRVPI 533

Query: 288 EEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
              ++          G+ +     D P           N+ K+G         H ++   
Sbjct: 534 ARVEQERKEEARLQPGIVRT----DEP---------VFNVPKLGKSHLRAWQDHEVIMIL 580

Query: 348 P 348
           P
Sbjct: 581 P 581


>gi|218516316|ref|ZP_03513156.1| L-lysine 2,3-aminomutase protein [Rhizobium etli 8C-3]
          Length = 195

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 115/195 (58%), Positives = 153/195 (78%)

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           LS +RL+ +++ L  I HV+I+RFH+RVP+VDP++I+  LI  LK +GK VY+A+HANHP
Sbjct: 1   LSPRRLRDIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHANHP 60

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHHPDL
Sbjct: 61  RELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHHPDL 120

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
           A GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK  I    I+  G+G Y 
Sbjct: 121 APGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVIGESVIRATGDGCYS 180

Query: 337 ITDHHNIVHDYPPKS 351
           ++D+    H YPP  
Sbjct: 181 VSDYRGGEHSYPPAG 195


>gi|148252209|ref|YP_001236794.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
 gi|146404382|gb|ABQ32888.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1]
          Length = 485

 Score =  274 bits (701), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 84/376 (22%), Positives = 146/376 (38%), Gaps = 48/376 (12%)

Query: 11  AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQKEELN 68
              +     +    +  I   +  +   +   +  NLI+    P+DP+ R   P  + L 
Sbjct: 49  LSQVPQLKSLPPRLVRGIHLAAMVFPFKVNSYVLDNLIDWGAAPDDPMFRLVFPHPDMLQ 108

Query: 69  ILPEEREDPIGDNNHSP-------------------------------LKGIVHRYPDRI 97
               E  D + +                                    L+G+ H+Y +  
Sbjct: 109 DGDREVLDDLLERGDEVAIAAEVQRIRADMNPHSSDQIVNVPLFEGASLEGVQHKYDETA 168

Query: 98  LL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           L   K    C  YC FCFR             ++D E   AY++ +  I +V+ TGGDP 
Sbjct: 169 LFFAKQGQTCHSYCSFCFRWPQFVDSAVDRFEARDGERLYAYLRTRRDITDVLLTGGDPF 228

Query: 156 ILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PELIQCL---KEAGK 205
           ++S +RL   L+ L      HV  +R  ++     PQR        EL + L    ++GK
Sbjct: 229 VMSSRRLADYLEPLLAPEFSHVTNIRIGTKALSYWPQRFYVGAEAEELNRLLVRVADSGK 288

Query: 206 PVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
            V +  H NH  E + E    A+  L  +G ++ +QS +L+ +NDD  +     R  V +
Sbjct: 289 QVAVMAHVNHWRELTPEPVHRAVEALRRSGAVIRTQSPVLRHVNDDVAVWRRNWRDQVAM 348

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
            + PYY+          +FR++++    I  +    +SG+C+      +  G GK+ +  
Sbjct: 349 GMIPYYMFVERDTGANHYFRISLDRALAIYQAAAAAVSGICRTARGPVMSAGPGKIHVL- 407

Query: 325 HNIKKVGNGSYCITDH 340
                +GN  Y +   
Sbjct: 408 -GRLAIGNDDYFVLSF 422


>gi|153875079|ref|ZP_02003031.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
 gi|152068457|gb|EDN66969.1| Protein of unknown function DUF160 [Beggiatoa sp. PS]
          Length = 314

 Score =  273 bits (700), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 13/247 (5%)

Query: 89  IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           + H+Y + +L        C  YC FCFR           L+S++ +A + Y+ E  ++ +
Sbjct: 1   MQHKYRETVLFFPSQGQTCHAYCSFCFRWPQFVGISDLKLASREVDALIQYVSEHPEVSD 60

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------L 196
           ++ TGGDP+I+  + L   +  L    + H++ +R  ++     P R   +        L
Sbjct: 61  ILLTGGDPMIMKTRILATYIDALLEANLPHLKTIRIGTKALSYWPYRFTSDADAEDLLTL 120

Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
              +    K +    H NHP E  ++    AI  +   G  + +QS LL  IND PEI A
Sbjct: 121 FAKVATKNKHLAFMAHFNHPRELKTDAVREAIKGIRETGAQIRTQSPLLAHINDQPEIWA 180

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315
            + +T  EL   PYY+          +F +++     I  +  + ++GL +      +  
Sbjct: 181 EMWKTQTELGCIPYYMFITRDTGAQHYFGVSLIRAWDIFKNAYQNVTGLARTVRGPSMSA 240

Query: 316 GYGKVKI 322
             GKV++
Sbjct: 241 TPGKVQM 247


>gi|325916984|ref|ZP_08179226.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937]
 gi|325536835|gb|EGD08589.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937]
          Length = 216

 Score =  273 bits (698), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 2/218 (0%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
           C V+CR+CFRR    +++    + +    A+  I   + I EV+ +GGDPL L+  +L +
Sbjct: 1   CAVHCRYCFRRHFPYAEE--TAAREGWREAVDAIAADADIDEVLLSGGDPLSLASPKLAE 58

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
           +   L  I H++ LR HSR+P+V P R++  L+  L+    PV   IHANH  EF  +  
Sbjct: 59  LTDALAAIPHLKRLRIHSRLPVVLPARVDAPLLAWLRSLPWPVAFVIHANHANEFDADVD 118

Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
            A+  L + G+ LL+Q+VLL+G+ND  + LA L        + PYYLH  D  AG +HF 
Sbjct: 119 TAMRALRDVGVQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFE 178

Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           +     + + A L  ++SG   P  + ++PG  GK  +
Sbjct: 179 VDDARARALHAELATRLSGYLVPRLVREIPGDTGKRPL 216


>gi|256810214|ref|YP_003127583.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
           fervens AG86]
 gi|256793414|gb|ACV24083.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
           fervens AG86]
          Length = 620

 Score =  272 bits (697), Expect = 4e-71,   Method: Composition-based stats.
 Identities = 81/362 (22%), Positives = 149/362 (41%), Gaps = 36/362 (9%)

Query: 1   MQLRH-----KTLTSAQDLYNANL--IKKEQIDEI-KEISNHYSIALTPVIANLINPHNP 52
            Q ++     K + + ++L       I  E ++ I K + N     +TP   +L +  NP
Sbjct: 217 WQFKNVIKGLKGIETLKELREETNFKISDEDLEIIEKAVKNGIPFGITPYYLHLFDFENP 276

Query: 53  ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
              +  + RQ IP +  +  + E +ED       +G+++ SP+  +  RY    ++K   
Sbjct: 277 YVEDLAVRRQVIPPEWYVEKMMEHKEDRDKAFDFMGEHDTSPIDLVTRRYVPIAIIKPYE 336

Query: 104 VCPVYCRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            CP  C +C R  MV           +  E AL +  E   + E++ TGGDP  LS K +
Sbjct: 337 SCPQICVYCQRNWMVQDFDTKAFKGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAI 396

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +++L  +  + HV  +RF +R  +  P RI  EL + L    K + ++ H    YE + E
Sbjct: 397 ERILNRVSEMDHVIGVRFGTRTIVTAPMRITDELAELLGSFEKSLMVSTHVESCYEITPE 456

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
               + +L    I + +Q V  + ++   E +A L     ++ I PYY  +P        
Sbjct: 457 VKETVEKLRKNNIYVYNQHVFHRYVSRRFENVA-LRIALKKVGIIPYYTFYPKGKMEHKD 515

Query: 283 FRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
           + + I    Q++    +              L  G  +      N+ ++G     +    
Sbjct: 516 YLVPIARLAQEVKEEAR--------------LLPGSFRTDEPIFNVPRMGKNH--LRAWQ 559

Query: 342 NI 343
           + 
Sbjct: 560 DR 561


>gi|218661195|ref|ZP_03517125.1| hypothetical protein RetlI_17423 [Rhizobium etli IE4771]
          Length = 320

 Score =  271 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 11/290 (3%)

Query: 38  ALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
            +T    + I      + +     P  +E         D  G++ ++ + G  H+Y    
Sbjct: 15  RVTRFYRDQIVKSGFFEQLKFIVEPSLKEFESPG--SLDTSGEHENTVVPGFQHKYEQTG 72

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           LL     C  YCR+CFR+ +VG +   + +  +    + YI    ++  V+ +GGDP +L
Sbjct: 73  LLLATDRCASYCRYCFRKRIVGQESSEIAN--EFAQIVEYIGSHLEMTNVLISGGDPFVL 130

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP----ELIQCLKEAGKPVYIAIHA 213
              +L  +L  L    H++ +RF +++    P+R        L Q + EAGK   I  H 
Sbjct: 131 RTGKLHGILDYLLPFTHLKSIRFGTKMLAYAPKRFEDPELGALFQRIHEAGKTAVIVTHF 190

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           +H  E S +A  +I  L + G+  L+QSVLL  +NDDPEILA+   T  ++ I PYYL  
Sbjct: 191 DHIGEISLDAERSIQSLRSHGVQFLNQSVLLAKVNDDPEILASTFATCHQMGIHPYYLFQ 250

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-FYILDLPGGYGKVKI 322
                G SHF++ ++ G +I   + +++SG+ +   YI  +    GK+++
Sbjct: 251 SRPVKGASHFQVPLDRGLEIAHGVSQRLSGVQKTFKYI--MSHYTGKIEL 298


>gi|289192520|ref|YP_003458461.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp.
           FS406-22]
 gi|288938970|gb|ADC69725.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp.
           FS406-22]
          Length = 620

 Score =  271 bits (695), Expect = 7e-71,   Method: Composition-based stats.
 Identities = 85/362 (23%), Positives = 150/362 (41%), Gaps = 36/362 (9%)

Query: 1   MQLRH--KTLTSAQDLYNA-----NLIKKEQIDEI-KEISNHYSIALTPVIANLINPHNP 52
            Q ++  + L   + L          I  E ++ I K + N     +TP   +L +  NP
Sbjct: 217 WQFKNVLRGLKGVKILRELREETNFKISDEDLEIIEKAVKNGIPFGITPYYLHLFDFENP 276

Query: 53  ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
              +  + RQ IP +  +  + E +ED       +G+++ SP+  +  RY    ++K   
Sbjct: 277 YVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMGEHDTSPIDLVTRRYVTIAIIKPYE 336

Query: 104 VCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            CP  C +C R  MV    +      +  E AL +  E   + E++ TGGDP  LS K +
Sbjct: 337 SCPQICVYCQRNWMVQDFSEKAFPGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAI 396

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +K+L  +  + HV  +RF +R  +  P RI  EL + L    K V I+ H  + YE + E
Sbjct: 397 EKMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKSVMISTHVENCYEITPE 456

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
              A+ +L    I + +Q V  + ++   E +A L     ++ I PYY  +P        
Sbjct: 457 VKEAVKKLRTNNIYVYNQHVFHRYVSRRFENVA-LRIALKKVGIIPYYTFYPKGKMEHKD 515

Query: 283 FRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
           + + I    Q++    +              L  G  +      N+ ++G     +    
Sbjct: 516 YLVPIARLAQEVKEEAR--------------LLPGSFRTDEPIFNVPRMGKNH--LRAWQ 559

Query: 342 NI 343
           + 
Sbjct: 560 DR 561


>gi|219117417|ref|XP_002179503.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409394|gb|EEC49326.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 470

 Score =  271 bits (695), Expect = 9e-71,   Method: Composition-based stats.
 Identities = 78/373 (20%), Positives = 152/373 (40%), Gaps = 52/373 (13%)

Query: 2   QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN---DPIA 57
           + +  +L+  + +   +   K  + +I+     +    +P   + LI+    +   DP  
Sbjct: 33  RYKAISLSHLEKVAEKHPQLKPHLRDIQLSGLVFPFKASPYYVDELIDWECEDVREDPFY 92

Query: 58  RQFIPQ-------------------------------KEELNILPEEREDPIGDNNHSPL 86
           +   P                                +E+LN  P  +++ +       L
Sbjct: 93  KLVFPTMDMLIEEHREKLEKAHKAGDPVKLIKTVAEIREDLNPHPAGQKE-LNAPKEDKL 151

Query: 87  KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            G+ H+Y + +L+       C  YC +CFR            + K+  +   Y+ E  ++
Sbjct: 152 TGVQHKYSETVLVFPAAAQTCHAYCTYCFRWAQFIGDDELRFAQKEATSLFEYLAEHEEV 211

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP------- 194
            +++ TGGDP+I+  K L + L+ L     + H++ LR  +R     PQR          
Sbjct: 212 SDILMTGGDPMIMKTKSLAQYLEPLTDPNFLPHIKNLRIGTRSLSFWPQRFTTDDDADEC 271

Query: 195 -ELIQCLKEAG-KPVYIAIHANHPYEF-SEEAIAAISRL-ANAGIILLSQSVLLKGINDD 250
            EL + ++E G + + I  H  H  E  +++   A++R+   A   + SQS +++G+NDD
Sbjct: 272 IELFRRVREQGNRHIAIMAHLGHDRELSTDKFQDAVNRIQKEAYATIRSQSPIMRGVNDD 331

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
            E+ A   R  V++ I PYY+          +F + +    K+ +      SGL +    
Sbjct: 332 AEVWARKWRKEVQMGIIPYYMFMARDTGAQQYFDVPLVRAHKLYSDAIRNCSGLIRTARG 391

Query: 311 LDLPGGYGKVKID 323
             +    GKV++ 
Sbjct: 392 PSMSCTPGKVEVT 404


>gi|84496424|ref|ZP_00995278.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649]
 gi|84383192|gb|EAP99073.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649]
          Length = 484

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 84/388 (21%), Positives = 167/388 (43%), Gaps = 51/388 (13%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKE-----QIDEIKEISNHYSIALTPVIANLI----NP 49
            Q R   + +   L      L+ ++     + D+++  +   S+ + P + N +    + 
Sbjct: 40  WQ-RAHCVKNVAQLRELMGDLLTEDFYADLERDQVERAT--MSMLVPPQMMNTMVSEMSW 96

Query: 50  HN--------------PNDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVH 91
            +                DP+ R  +P    ++ +    P    D + +++   ++G+ H
Sbjct: 97  ADGSMPAAGAAFTEAFLADPVRRYMLPVFSDRRTDWPSHPFAARDSLHEHDMWAVEGLTH 156

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQI 144
           RYP ++L ++L  CP YC  C R ++VG+    ++  K          A L Y+Q   Q+
Sbjct: 157 RYPTKVLAEMLPTCPQYCGHCTRMDLVGNSTAQIVKLKLAGKPVDRHAAMLDYLQRTPQV 216

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL--- 200
            +V+ +GGD   +  K L+  L  L  I +++ +R  ++  +  PQ    P++++ +   
Sbjct: 217 RDVVVSGGDVANMPWKNLEGFLDKLMRIDNIRDIRLATKALMGLPQHWLQPDVVEGVARV 276

Query: 201 ----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILA 255
               +  G  + I  H NH    +     A   +  AG+  + +Q VL++GIND  + L 
Sbjct: 277 SALARSRGVSLAIHTHVNHAQSVTPLVADASKAMLEAGVRDVRNQGVLMRGINDTSKDLL 336

Query: 256 NLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           +L     +   I PYY +  D+   + H+RL + E Q +  S+   + G   P  + D+P
Sbjct: 337 DLCFALQDEAMITPYYFYMCDMIPFSEHWRLALHEAQHLQHSIMGYLPGFATPRIVCDVP 396

Query: 315 GGYGKVKIDTHNIKKVGNG-SYCITDHH 341
              GK  +   +      G S+   ++ 
Sbjct: 397 -FVGKRWVHQVDTYDRDKGMSFWRKNYR 423


>gi|15668815|ref|NP_247618.1| hypothetical protein MJ_0634 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496087|sp|Q58051|Y634_METJA RecName: Full=Uncharacterized KamA family protein MJ0634
 gi|1591346|gb|AAB98629.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 620

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 85/362 (23%), Positives = 149/362 (41%), Gaps = 36/362 (9%)

Query: 1   MQLRH-----KTLTSAQDLYNANL--IKKEQIDEI-KEISNHYSIALTPVIANLINPHNP 52
            Q ++     K +   ++L       I  E ++ I K + N     LTP   +L +  NP
Sbjct: 217 WQFKNVLRGLKGVKILRELREVTNFKISDEDLEIIEKAVKNGIPFGLTPYYLHLFDFENP 276

Query: 53  ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
              +  + RQ IP +  +  + E +ED       +G+++ SP+  +  RY    ++K   
Sbjct: 277 YVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMGEHDTSPIDLVTRRYVTIAIIKPYE 336

Query: 104 VCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            CP  C +C R  MV           +  E AL +  E   + E++ TGGDP  LS K +
Sbjct: 337 SCPQICVYCQRNWMVQDFDAKAFPGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAI 396

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +K+L  +  + HV  +RF +R  +  P RI  EL + L    K + I+ H    YE + E
Sbjct: 397 EKMLNRIAEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKSLMISTHVESCYEITPE 456

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
              A+ +L    I + +Q V  + ++   E +A L     ++ I PYY  +P        
Sbjct: 457 VAEAVKKLRTNNIYIYNQHVFHRYVSRRFENVA-LRIALKKVGIIPYYTFYPKGKMEHKD 515

Query: 283 FRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
           + + I    Q++    +              L  G  +      N+ ++G     +    
Sbjct: 516 YLVPIARLAQEVKEEAR--------------LLPGSFRTDEPIFNVPRMGKNH--LRAWQ 559

Query: 342 NI 343
           + 
Sbjct: 560 DR 561


>gi|218781690|ref|YP_002433008.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
           alkenivorans AK-01]
 gi|218763074|gb|ACL05540.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 594

 Score =  270 bits (690), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 86/360 (23%), Positives = 154/360 (42%), Gaps = 21/360 (5%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLINP--HNPND-PI 56
             ++H  +   + L +   +  E+   I           +TP  A+L++       D  +
Sbjct: 194 WHVKH-IIRDEKILGDLVQLTDEEKQAIALARERRIPFGITPYYASLMDEKEDRKRDYAV 252

Query: 57  ARQFIPQK------EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
             Q IP         E     E   D + +N+ SP++GI  RYP  ++LK +  CP  C 
Sbjct: 253 RAQVIPPLNYIEKLWEARQRSEASMDFMLENDTSPIEGITRRYPMIVILKPILTCPQICV 312

Query: 111 FCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168
           +C R   +     +   LS K  E A+ +I +  +I EV+ TGGDP +LS+ R++ +L  
Sbjct: 313 YCQRNWEIEDVYSQTAALSQKKLERAIQWIADTPEIREVLVTGGDPFLLSNSRIENLLFR 372

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAI 224
           L  IKH++ +R  +R P+  PQRI   L + +    +P    + +  H  HPYE +  A+
Sbjct: 373 LSSIKHIERIRIGTRTPVTLPQRITESLARDIGHFHEPGKREITVITHFEHPYEITPNAM 432

Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284
            A+ ++   G+ + +Q V     N      A L      + + PYY  +      T  +R
Sbjct: 433 EAVQKIRRLGMSVKNQMVFT-TFNSRKFEAAVLRHKLSLIGVSPYYTFNTKGKEETEDYR 491

Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK---VKIDTHNIKKVGNGSYCITDHH 341
           + +    +  A     + G  +   ++    G GK     +  H++  +      + + H
Sbjct: 492 VPLARLLQERAEEARLMPGTVRTDGVVFNVPGLGKNDITAMQHHSVLSILPNGRRVYEFH 551


>gi|149924160|ref|ZP_01912537.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1]
 gi|149814961|gb|EDM74521.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1]
          Length = 407

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 49/340 (14%)

Query: 32  SNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEER--------------- 74
           S          I   LI+    P+DP+ +    Q   L      R               
Sbjct: 2   STVLPFKTNEYIVEELIDWDRVPDDPMFQLTFVQSGMLAEHDYARMAELVRAGASKAEIR 61

Query: 75  -----------EDPIGDNNHSP-------LKGIVHRYPDRILLKL--LHVCPVYCRFCFR 114
                        P G  +H+        L+G+ H+Y + +L        C  YC FCFR
Sbjct: 62  SAADAIRLRLNPHPAGQRSHNVPTVDGRRLEGVQHKYRETVLFFPQQGQTCHAYCTFCFR 121

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR--YI 172
                  +G    S++      Y++    + +V+FTGGDP+++  + L++ ++ L     
Sbjct: 122 WAQFVGLEGMKFESREMADLTTYLRNNPAVTDVLFTGGDPMVMKTRVLRRYIEPLLHPDF 181

Query: 173 KHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEA 223
           +H+  +R  ++     PQR   +        L + +  +G+ + +  H NHP E  +E A
Sbjct: 182 EHIN-VRIGTKSVSYWPQRYVSDDDADELLALFEEVSASGRHLALMAHYNHPRELQTEVA 240

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
             A++R+ + G  +  QS L++ IND PE  A L RT V+L   PYY+         ++F
Sbjct: 241 QRAVARIRSTGAQIRIQSPLIRRINDAPETWAELWRTGVKLGCIPYYMFVERDTGPRNYF 300

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
            + +    +I      ++SGL +      +    GKV +D
Sbjct: 301 EVPLARAWEIFGDAYRQVSGLARTVRGPSMSTMPGKVLVD 340


>gi|261402967|ref|YP_003247191.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
           vulcanius M7]
 gi|261369960|gb|ACX72709.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
           vulcanius M7]
          Length = 621

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 84/362 (23%), Positives = 148/362 (40%), Gaps = 36/362 (9%)

Query: 1   MQLRH--KTLTSAQDLYNA-----NLIKKEQIDEI-KEISNHYSIALTPVIANLINPHNP 52
            Q ++  + L   + L          I  + ++ I K + N     LTP   +L +  NP
Sbjct: 218 WQFKNVLRGLKGVEILKKLREETNFKISDDDLEIIEKAVKNGIPFGLTPYYLHLFDFENP 277

Query: 53  ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
              +  + RQ IP +  +  + E +ED       +G+++ SP+  I  RY    ++K   
Sbjct: 278 YVEDLAVRRQVIPPEWYVEKMIEHKEDRDTAFDFMGEHDTSPIDLITRRYVTIAIVKPYE 337

Query: 104 VCPVYCRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            CP  C +C R  MV           +  E AL +  E   + E++ TGGDP  LS K +
Sbjct: 338 SCPQICVYCQRNWMVQDFDAKAFKGWEKIEKALDWFAEHDSMIEILITGGDPFSLSDKAI 397

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +++L  +  + HV  +RF +R  +  P RI  EL + L    K + I+ H    YE + E
Sbjct: 398 ERMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKRIMISTHVESCYEITPE 457

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282
              A+ +L    I + +Q V  + ++   E +A L     ++ I PYY  +P        
Sbjct: 458 VKDAVEKLNKNKIYVYNQHVFHRYVSRRFENVA-LRIALKKVGIIPYYTFYPKGKMEHKD 516

Query: 283 FRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
           + + I    Q++    +              L  G  +      N+ ++G     +    
Sbjct: 517 YLVPIARLAQEVKEEAR--------------LLPGSFRTDEPIFNVPRMGKNH--LRAWQ 560

Query: 342 NI 343
           + 
Sbjct: 561 DR 562


>gi|71735715|ref|YP_276669.1| arginine aminomutase [Pseudomonas syringae pv. phaseolicola 1448A]
 gi|71556268|gb|AAZ35479.1| arginine aminomutase, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 385

 Score =  269 bits (688), Expect = 6e-70,   Method: Composition-based stats.
 Identities = 93/364 (25%), Positives = 160/364 (43%), Gaps = 20/364 (5%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPH---NP--NDP 55
            Q ++                +E    I++      + +TP   +LI       P    P
Sbjct: 20  WQQKNALRDEPALRSACGGWNQEISIRIEQNLLGRKMQITPYYVDLIMQSLGSEPVTEHP 79

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCF- 113
           + RQ +P   E  +   +      + NH        H+Y +R++L++ + C  YC+FCF 
Sbjct: 80  LWRQVVPYWNENVMGDYDGASENWELNHEMKTPICQHKYDNRVILRMTNTCNAYCQFCFE 139

Query: 114 --RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
             R   VG+ K    +    + ++ YI+    I EVI +GGDPL+LS ++L++ L  LR 
Sbjct: 140 ALRTLQVGTDKKNANTDLFLD-SVEYIRNNPAIEEVILSGGDPLMLSDRKLEENLAALRS 198

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
           I+   ++R HSR    +P R+  E +  L +        +H  HP E S +   AIS++ 
Sbjct: 199 IREDLLIRIHSRALSFNPFRVTDEFVAILAKYKVN-AFGVHVCHPLELSVDFERAISKIR 257

Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEG 290
            A  I+ S   LL+G+ND+ + L  L      + +KPYYL+H    + G S ++ +I + 
Sbjct: 258 IAVPIIFSNMPLLRGVNDNEKTLHRLFIDLYRMGVKPYYLYHFMPFSPGASEYKASISQA 317

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI----DTHNIK----KVGNGSYCITDHHN 342
             I+  LK ++S +  P Y+L    G   V +       ++     + G   Y   +   
Sbjct: 318 IAIMNRLKRRVSNIALPEYVLPHAQGKFTVPLVDFEQPEDLPRFENRDGQRYYKFKNCEG 377

Query: 343 IVHD 346
               
Sbjct: 378 QWCT 381


>gi|332975312|gb|EGK12210.1| hypothetical protein HMPREF9374_1621 [Desmospora sp. 8437]
          Length = 377

 Score =  268 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 21/330 (6%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           + + + + + ++   +   ++P ++ L       DP+A+QFIP   E      E+    G
Sbjct: 9   VHRTEREMVLDVIGKFRTKMSPALSRLAKQS---DPVAKQFIPSPYEALDFGTEKPFEEG 65

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
            NNH  + G+   Y DR +L     C  YCR+CF++    +     +S +D + A+ +I+
Sbjct: 66  KNNHG-IYGLERVYEDRAVLTPYFECSAYCRYCFKKSRTLAGSAKRMSDEDIDKAIRFIE 124

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
             S+I  V+ TGGDPL+   + L+KVL  +  I H++ +R  +R  +  P+++ P+L + 
Sbjct: 125 SDSRIRTVLITGGDPLV-DPRLLEKVLDKVFPIPHIRNIRIGTRNILFSPEKVTPDLAKM 183

Query: 200 LKEA----------GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
           +              K + I +  NH  E + E + A  RL   GI +  Q VLLKGIND
Sbjct: 184 IARYQQIDYDEPRKSKNISIGLSLNHVDELTPEVVRAYQRLIREGITVRGQVVLLKGIND 243

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
               +  L+ TF+   I PYYL H     G  HFR ++++G  ++  L    SG     Y
Sbjct: 244 SVSAMRELLETFLCTGIVPYYLFHCMPVVGAKHFRTSVQKGLDLLQELSPY-SGTTTFQY 302

Query: 310 ILDLPGGYGKVKIDTHN---IKKVGNGSYC 336
           +   P   GK +I   +     K+    Y 
Sbjct: 303 VYVTP--IGKHRIAPGHQLEYVKIDGSRYI 330


>gi|256377785|ref|YP_003101445.1| lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
 gi|255922088|gb|ACU37599.1| Lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827]
          Length = 459

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 76/381 (19%), Positives = 154/381 (40%), Gaps = 39/381 (10%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYS---IALTPVIANLINP-----H 50
            Q R   + + + L      L+      +++      +   + L P + N + P      
Sbjct: 48  WQ-RAHCVKNVKQLRAVLGDLVDDRFYADLEADQEQLATMSMLLPPQMLNTVVPRLGEGG 106

Query: 51  N-----PNDPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101
           +       DP+ R  +P + + +      P    D + +     ++G+ HRYP ++L +L
Sbjct: 107 DFTEAFYADPVRRYMLPVRSDRDPDWPSHPHSSRDSLHEAEMWVVEGLTHRYPTKVLAEL 166

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDP 154
           +  CP YC  C R ++VG+    V   K         +  + Y++    + +V+ +GGD 
Sbjct: 167 VSTCPQYCGHCTRMDLVGNSTPQVAKHKLALKPVDRQDRIVEYLKSTPGVRDVVVSGGDV 226

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCL-------KEAGKP 206
             +   +L+  L  L  ++ V+ +R  ++     PQ  + P++++ L          G  
Sbjct: 227 ANVPWPQLESFLMRLLGVETVRDVRLATKALAGLPQHWVQPQVVEGLERVARTAARRGVN 286

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-EL 264
           + I  H NH    +     A       G+  + +Q VL++G+N     L +L      E 
Sbjct: 287 LAIHTHVNHANSVTPLVAEAARTALAVGVRDVRNQGVLMRGVNATATDLLDLCFALQGEA 346

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-D 323
            + PYY +  D+     H+R+ + E Q++  ++   + G   P  + D+P   GK  +  
Sbjct: 347 GVLPYYFYMCDMIPNAEHWRVAVWEAQELQHAIMGYLPGYATPRIVCDVP-YVGKRWVHQ 405

Query: 324 THNIKKVGNGSYCITDHHNIV 344
                +    SY   ++   +
Sbjct: 406 VQEYDRERGVSYWTKNYRTGI 426


>gi|238059077|ref|ZP_04603786.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149]
 gi|237880888|gb|EEP69716.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149]
          Length = 469

 Score =  266 bits (682), Expect = 2e-69,   Method: Composition-based stats.
 Identities = 84/376 (22%), Positives = 160/376 (42%), Gaps = 37/376 (9%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQ-----IDEIKEISNHYSIALTPVIANLINPHNP--- 52
            Q R   + + + L        ++     +   ++     S+ + P + N + PH P   
Sbjct: 58  WQ-RVNCIKNIKQLRAVLGDTVDESLYTDLAADQDAHATMSMLVPPQMINTMVPHAPPTT 116

Query: 53  ----NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104
                DPI R  IP   +        P    D + +++    +G+ HRYP ++L +LL  
Sbjct: 117 EALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLST 176

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           CP YC  C R ++VG+    V   K         +A +AY++    + +V+ +GGD   +
Sbjct: 177 CPQYCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHIAYLKAHPGVRDVVVSGGDVANV 236

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLKE-------AGKPVYI 209
             + L+  L  L  I+ ++ +R  ++  +  PQ    P++++ L+         G  + I
Sbjct: 237 PWRNLESYLMRLLEIETIRDVRLATKALMGLPQHWLQPDVVEGLERVARTAARRGVNLAI 296

Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD-PEILANLMRTFVELR-I 266
             H NH    +     A     + G+  + +Q VL++G+N   P++L  L R F   + I
Sbjct: 297 HTHVNHRQSITPLVAKAAQTALDVGVRDVRNQGVLMRGVNATAPDLLGPLFRPFRRKKKI 356

Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTH 325
            PYY +  D+     H+R+ +   Q++   +   + G   P  + D+P   GK  +    
Sbjct: 357 LPYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMLT 415

Query: 326 NIKKVGNGSYCITDHH 341
           +  +    SY   ++ 
Sbjct: 416 DYDREHGISYWTKNYR 431


>gi|6729659|emb|CAB67710.1| hypothetical protein [Streptomyces rochei]
          Length = 403

 Score =  266 bits (682), Expect = 3e-69,   Method: Composition-based stats.
 Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 34/328 (10%)

Query: 53  NDPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
           +DP+ R  +P   + +      P    D + + +   ++G+ HRYP ++L +LL  CP Y
Sbjct: 56  DDPVRRYMMPVMSDRHPQWPSHPMASRDSLHEQDMWVVEGLTHRYPTKVLAELLSTCPQY 115

Query: 109 CRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
           C  C R ++VG+    V  S+         +  LA+++    I +V+ +GGD   +   R
Sbjct: 116 CGHCTRMDLVGNSTPQVTKSRLQLKPVDRADRILAHLRVSPGIRDVVVSGGDLANMPWPR 175

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEAGKPVYIAIHA 213
           L++ L  L  I  ++ +R  S+  I  PQ  N          + +  +  G  + +  HA
Sbjct: 176 LERFLDDLLEIDSIRDIRLASKALIGLPQHWNSGPLLEGVARIARKARSRGVRIALHTHA 235

Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYL 271
           N   + +     A   L +AG+  + +Q VL++G+ND    L +L     +   I PYY 
Sbjct: 236 NAAQQVTPAVARAAWALLDAGLHDVRNQGVLMRGVNDSAHDLLDLCFALTDHAGITPYYF 295

Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--THNIKK 329
           +  D+     H+R+ +   Q I   +   + G   P  + D+P   GK  +D      ++
Sbjct: 296 YMCDMIPNAEHWRVPLHRAQLIQRQIMGYLPGFATPRIVCDVPMA-GKRWVDQTDSYDRE 354

Query: 330 VGNGSYCI----------TDHHNIVHDY 347
           +G   +             D H+  + Y
Sbjct: 355 LGVSHWSKSYLTPLEAADRDAHDGTYHY 382


>gi|330508808|ref|YP_004385236.1| KamA family protein [Methanosaeta concilii GP-6]
 gi|328929616|gb|AEB69418.1| KamA family protein [Methanosaeta concilii GP-6]
          Length = 582

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 77/324 (23%), Positives = 141/324 (43%), Gaps = 18/324 (5%)

Query: 1   MQLRH--KTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLIN--PHNPNDP 55
            Q RH  K +   + +  A  + +E    I+  + NH    +TP   +L++  P + +  
Sbjct: 180 WQFRHVFKDIQGLETIKRAIKLDEEHEASIRLALENHVPFGVTPHYLHLMDKEPSDMDYA 239

Query: 56  IARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           + RQ  P    +  +   R+D       + + + SP+  I  RYP   ++K    CP  C
Sbjct: 240 VRRQVFPPLSYVENMIAHRKDKKWAFDFMRERDTSPIDLITRRYPRVAIVKPYESCPQIC 299

Query: 110 RFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
            +C R   + S      +   +  EAA+ +  E  ++ +V+ TGGDPL++    + ++L 
Sbjct: 300 VYCQRNWEISSPLMASALAPMEKIEAAIDWFYEHEEMMDVLLTGGDPLVMDDSLIDRILN 359

Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPYEFSEEA 223
            L  I H++ +R  SR P   PQR+  EL + L        + + +  H  HPYE + E 
Sbjct: 360 RLSQIPHLKSIRVASRTPATVPQRLTEELCEILGSYQELGRRNLCLVTHFMHPYEVTPET 419

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
           +AAI R+   GI + +Q V     +   E  ++L     ++ + PYY  +         +
Sbjct: 420 LAAIIRVKKTGIEIYNQQVFTFANSRKFET-SSLRIILKQIGVDPYYTFNMKGKTEMEDY 478

Query: 284 RLTIEEGQKIVASLKEKISGLCQP 307
            + I    +        + G+ + 
Sbjct: 479 AVPIARILQERKEEARLLPGIFRT 502


>gi|302533021|ref|ZP_07285363.1| CmnP [Streptomyces sp. C]
 gi|302441916|gb|EFL13732.1| CmnP [Streptomyces sp. C]
          Length = 463

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 84/363 (23%), Positives = 152/363 (41%), Gaps = 44/363 (12%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKE-----QIDEIKEISNHYSIALTPVIANLINPHN-- 51
            Q R   +  A+ L      L+ +E     + D +   +   S+ L P + N +      
Sbjct: 48  WQ-RAHCVKDAKGLRAVVGDLLDEEFYEDWERDRLHRAT--MSVLLPPQMINTMAAEASA 104

Query: 52  ----------PNDPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRI 97
                      +DP+ R  +P   + +      P    D + + +   ++G+ HRYP ++
Sbjct: 105 ARPGELTKAFYDDPVRRYMLPVFSDRHPVWPSHPMASRDSLHEQDMWVVEGLTHRYPTKV 164

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFT 150
           L +LL  CP YC  C R ++VG+    V  ++         E  LA+++    I +V+ +
Sbjct: 165 LAELLSTCPQYCGHCTRMDLVGNSTPQVTKNRLQLKPADRAEQILAHLRATPGIRDVVVS 224

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKE 202
           GGD   +   RL++ +  L  I+ ++ +R  S+  I  PQ  +          +    + 
Sbjct: 225 GGDLANMPWPRLERFVDGLLDIESIRDIRLASKGLIGLPQHWSSPPVLRGVERVAAKARS 284

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTF 261
            G  V +  HAN   + +     A   L  AG+  + +Q VL++G+ND    L +L    
Sbjct: 285 RGVRVALHTHANAAQQVTSGVARAAWGLLGAGLHDVRNQGVLMRGVNDSAHDLLDLCFAL 344

Query: 262 VE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
            +   I PYY +  D+     H+R+ +   Q I   +   + G   P  + D+P   GK 
Sbjct: 345 CDHAGITPYYFYMCDMIPNAEHWRVPLHSAQLIQRQIMGYLPGFATPRIVCDVPMA-GKR 403

Query: 321 KID 323
            +D
Sbjct: 404 WVD 406


>gi|270264931|ref|ZP_06193195.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13]
 gi|270041229|gb|EFA14329.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13]
          Length = 333

 Score =  263 bits (673), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 99/333 (29%), Positives = 164/333 (49%), Gaps = 21/333 (6%)

Query: 20  IKKEQIDEIKEISN--HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE-- 75
           +  EQ   +K++     +S  LTP +  L            Q I    E N   E     
Sbjct: 1   MSAEQKIVVKQVEEETRFSEKLTPYLKELSKTS--------QAIKDMYEFNPEYETLPAN 52

Query: 76  ---DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG--SQKGTVLSSKD 130
              D + +   +P+ G V +Y  ++L+ L + C   CR+C R++ VG        L    
Sbjct: 53  LDVDLLNEKTSTPVFGTVKKYDGQLLVLLSYTCAANCRYCERQDRVGVGLDVEGRLKMSQ 112

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
            +  + YI     I+EVI +GGDPL  + K LQ +   L+ I HV+++R H+R P+ +P 
Sbjct: 113 IDDIVDYIANDKSIYEVIASGGDPLT-NPKGLQYLFNRLKAIDHVKVVRIHTRYPLQNPG 171

Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           ++  EL++ L +A   VY+++H +HP E   E I  I      G +LL+Q+V LK INDD
Sbjct: 172 KVRMELMEELAQAKPTVYLSLHIDHPDELQPEVIEMIRAFKKMGYVLLTQTVFLKTINDD 231

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310
            + L  L     EL ++PYY++H      T  F + +E+   I+  L+ ++SGL  P ++
Sbjct: 232 KDTLKTLFLRLFELGVRPYYIYHGQEVTSTRRFVMRLEDEMAIMTQLRNELSGLAFPQHV 291

Query: 311 LDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
           +D+P   GKV + + +       +  +TD +  
Sbjct: 292 IDIPSASGKVVVPSDH---WQTDTATVTDFYGK 321


>gi|256394391|ref|YP_003115955.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928]
 gi|256360617|gb|ACU74114.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928]
          Length = 441

 Score =  261 bits (668), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 74/358 (20%), Positives = 142/358 (39%), Gaps = 45/358 (12%)

Query: 11  AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQFIPQKEE-- 66
             ++     +  +  + ++  S      +   + + LI+   P+ DP+   F PQ     
Sbjct: 22  LDEIAAKYGLDPQLRESVRLFSLVLPFRVNEYVLSELIDWSAPDADPVFHLFFPQPGMLS 81

Query: 67  -----------------------------LNILPEERED-PIGDNNHSPLKGIVHRYPDR 96
                                        +N  PE ++D  +  +   PL G  H+Y   
Sbjct: 82  PEDEQRLTAARDGGDAGELARTIAAIRAGMNPHPEHQQDLNVPSDPDGPLPGTQHKYEQT 141

Query: 97  ILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +L        C  YC +CFR      +     S+ D   A+AY++   ++ +V+ TGGDP
Sbjct: 142 LLYFPAAGQTCHAYCTYCFRWAQFVGEPELRFSAADPARAVAYLRRHPEVTDVLVTGGDP 201

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKP 206
           ++++ +RL++ L+    ++ +Q +R  ++     P R            L + + EAGK 
Sbjct: 202 MVMTAERLRQHLEPFLAVESLQTVRIGTKSVASWPHRYVSDHDADATLRLFEQIAEAGKT 261

Query: 207 VYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
             +  H +HP E     A  A+SR+ + G ++  Q+ ++  +NDD    A L R      
Sbjct: 262 PALMAHLSHPVELEPAIARTALSRIRDTGALVYCQAPIIGRVNDDAAAWARLWRAEQRAG 321

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
             PYY+          +F++ +    ++       + GL +      +    GKV +D
Sbjct: 322 AVPYYMFVARDTGPRDYFKVPLARAAEVFRDAYSALPGLARTVRGPVMSTTGGKVVVD 379


>gi|311899414|dbj|BAJ31822.1| putative L-lysine 2,3-aminomutase [Kitasatospora setae KM-6054]
          Length = 487

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 84/379 (22%), Positives = 152/379 (40%), Gaps = 40/379 (10%)

Query: 1   MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYS---IALTPVIANLINPHN---P 52
            Q R   +   + L      L+     DE+      ++   + + P + N +       P
Sbjct: 39  WQ-RAHCVQGERQLRQVFGPLLTDRFYDELAADQREFATMSVLVPPQMLNTMAAGAELAP 97

Query: 53  N--------DPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100
           +        DP+ R  +P + + +      P    D + +     ++G+ HRYP ++L +
Sbjct: 98  DAFTEAFLADPVRRYMLPVRSDRHPSWPSHPLAARDSLHEAQMWVVEGLTHRYPTKVLAE 157

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAYIQEKSQIWEVIFTGGD 153
           LL  CP YC  C R ++VG     V  ++         E  L Y++    + +V+ +GGD
Sbjct: 158 LLSTCPQYCGHCTRMDLVGRSTPQVAKARLVLRPADREEQMLDYLKRTPSVRDVVVSGGD 217

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGK 205
              +   RL+  L  L  +  V+ +R  S+  +  PQ             + +       
Sbjct: 218 LANVPWPRLESFLLRLLELGSVRDIRLASKSVVGLPQHWLQPKVLSGVERVARLAARRSV 277

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-E 263
            + +  HANH    +     A   L +AG+  + +Q VL++G+N  P  L +L      E
Sbjct: 278 NLAVHTHANHAASVTPLVAEAARGLLDAGVRDVRNQGVLMRGVNATPTALLDLCFALQGE 337

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI- 322
             I PYY +  D+     H+RL + E Q +  ++   + G   P  + D+P   GK  + 
Sbjct: 338 ANILPYYFYLCDVIPNAEHWRLPLAEAQHLQEAILGYLPGYATPRLVADVPD-VGKRWVH 396

Query: 323 DTHNIKKVGNGSYCITDHH 341
                 +V   SY   ++ 
Sbjct: 397 QAVGYDRVRGISYWTKNYR 415


>gi|260828943|ref|XP_002609422.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae]
 gi|229294778|gb|EEN65432.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae]
          Length = 512

 Score =  259 bits (663), Expect = 5e-67,   Method: Composition-based stats.
 Identities = 73/343 (21%), Positives = 138/343 (40%), Gaps = 50/343 (14%)

Query: 30  EISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQK----------------------- 64
             +    +     +   LI+  N P DPI +   PQ                        
Sbjct: 80  AAATVLPMRTNNYVVQELIDWSNVPEDPIFQLTFPQPGMLKPEALERISKLMKNNAPRTV 139

Query: 65  ---------EELNILPEERED-PIGDNNHSPLKGIVHRYPDRILLKL--LHVCPVYCRFC 112
                    +E+N  P +++   +   +  PL G+ H+Y + +L        C  YC +C
Sbjct: 140 LQREAEVIRKEMNPHPAQQKTMNVPRVDGHPLPGLQHKYRETVLFFPAEGQFCHAYCTYC 199

Query: 113 FRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           FR     S        S D++    Y++    + +++ TGGDP+++S +RL   +  L  
Sbjct: 200 FRWAQFTSVGSPQQFQSDDSKLLQLYLRRNRHVSDLLLTGGDPMVMSAQRLGGYILPLLK 259

Query: 172 ---IKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EAGKPVYIAIHANHPYEF- 219
              + ++  +R  ++     P R      + +L++  +   ++G+ + I  H +HP E  
Sbjct: 260 DTCLDNLSTIRIGTKSLAYWPYRYVTDSDSDDLLRIFEEVVKSGRQLAIMAHFSHPRELS 319

Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
           +     AI RL   G ++ +Q+ L+  +N DP   A L+RT   L + PYY+        
Sbjct: 320 TPTVQEAIRRLRMTGAVIRAQAPLVNHVNADPATWARLIRTETRLGVIPYYMFVERDTGA 379

Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             +F + +    +I +     +SGL +      +    GKV +
Sbjct: 380 RHYFEVPLARAVEIYSQAFSSVSGLGRTLRGPSMSATPGKVHV 422


>gi|296108845|ref|YP_003615794.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
           infernus ME]
 gi|295433659|gb|ADG12830.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus
           infernus ME]
          Length = 589

 Score =  259 bits (662), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 93/379 (24%), Positives = 157/379 (41%), Gaps = 35/379 (9%)

Query: 1   MQLRH-----KTLTSAQDLYNANLIKKEQIDEI-KEISNHYSIALTPVIANLINPHNP-- 52
            Q ++     K L   +DL +   I +E +  + K I N+   A+TP   +L +   P  
Sbjct: 190 WQFKNVIKGKKGLEILRDLKDIVKISEEDLTLLEKAIENNIPYAITPYYLHLFDFDQPYK 249

Query: 53  -NDPIARQFIPQKEELNILPE----EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
            + PI RQ IP +  +N++      E  D +G+ + +P + I  RY    ++K    CP 
Sbjct: 250 YDLPIRRQVIPPEHYINMMANAESREVFDYMGELDTTPEELITRRYVTIAIMKPYESCPQ 309

Query: 108 YCRFCFRREMVGSQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
            C +C R  M+              E AL + +E   + E++ TGGDPL LS   ++K++
Sbjct: 310 ICVYCQRNWMIKDFGDKAFVGWDKVEKALKWFEEHESMIEILITGGDPLCLSDSSIKKIV 369

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIA 225
           + ++   HV  +RF +R  +  P RI   L+  L     K V ++ HA   YE + E   
Sbjct: 370 ERIKNFDHVIGVRFGTRTLLTAPMRITESLLDVLSILKDKKVIVSTHAESSYEITPEVKR 429

Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285
           A+  L +  I + +Q V  + ++   E +A L     ++ I PYY  +P        + +
Sbjct: 430 AVELLGSKNIRVYNQHVYHRYVSRRFENVA-LRIALRKVGIIPYYTFYPKGKEEHRDYLI 488

Query: 286 TIEEGQKIVASLKEKISG--------LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCI 337
            I    + V      + G           P    +   G  +  I    IK  G   Y +
Sbjct: 489 PIARIVQEVHEEARLLPGTFRTDEPIFNVPRLGKNHLRGENRELIA---IKPDGRRVYIM 545

Query: 338 TDHHNIVH--------DYP 348
                 ++        DYP
Sbjct: 546 HPWEKGIYKTNIYVYEDYP 564


>gi|315229952|ref|YP_004070388.1| lysine 2,3-aminomutase [Thermococcus barophilus MP]
 gi|315182980|gb|ADT83165.1| lysine 2,3-aminomutase [Thermococcus barophilus MP]
          Length = 647

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 84/366 (22%), Positives = 149/366 (40%), Gaps = 39/366 (10%)

Query: 1   MQLRH-----KTLTSAQDLYNANLI--KKEQIDEIK-EISNHYSIALTPVIANLINPHNP 52
            Q  H     K L + ++L    ++   +E + +++  +       +TP   +L +  NP
Sbjct: 239 WQFSHVLKREKGLETLRELNELGIVKVPEEDLKQVEIAVKYGIPWGITPYYLHLWDFENP 298

Query: 53  ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
              +  + RQ +P    ++ + + RED       +G+++ SPL  I  RY    +LK   
Sbjct: 299 YKEDRHVRRQVMPPTWYVSNMLQHREDREYYFDFMGEHDTSPLDLITRRYVTIAILKAYD 358

Query: 104 VCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
            CP  C +C R   V      G+       EAA+ +  E   + +V+ TGGDPL LS K 
Sbjct: 359 TCPQICVYCQRNWEVLEPFMAGSFPGWDKIEAAIEWFGEHESMLDVLITGGDPLALSDKI 418

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPY 217
           + K++  L    HV  +R+ SR+ +  P RI   L + L        + V I+ H    Y
Sbjct: 419 IDKIMSRLSEFDHVVNIRWGSRIFVTVPMRITNSLAEILGSYIEPGKRNVSISTHFETAY 478

Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
           E + E   A  ++   GI + +Q V  + ++   E +A L     ++ I PYY  +P   
Sbjct: 479 EVTPEVAEATYKIRRQGIYIYNQLVYQRNVSRRFENVA-LRIALRKVGIDPYYTFYPKGK 537

Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCI 337
                + + I    +        + G     +  D P           N+ ++G     +
Sbjct: 538 IEQKDYLVPIARVVQERKEEARLLPG----QFRPDEP---------VFNVPRMGKNH--L 582

Query: 338 TDHHNI 343
               + 
Sbjct: 583 RAWQDR 588


>gi|227357432|ref|ZP_03841786.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906]
 gi|227162390|gb|EEI47390.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906]
          Length = 260

 Score =  258 bits (659), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 4/225 (1%)

Query: 6   KTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
           + ++   +L     ++   ++    +    + + +       +   +PNDP+  Q +   
Sbjct: 21  QAISDPVELLQLLALEHHAELQRGAQARRLFPLRVPREFVARMKKGDPNDPLLLQVLTAH 80

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            E  + P    DP+ +  ++ + G++H+Y +R LL +   C V CR+CFRR      +  
Sbjct: 81  AEFTLTPGFSTDPLDEQQNA-VPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPY--EDN 137

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
             +  + + A+ YI+   ++ E+IF+GGDPL+     L  ++  L  I H++ LR HSR+
Sbjct: 138 KGNKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQLEAIPHIKRLRIHSRL 197

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229
           P+V P RI   L Q L+++     + +H NH  E  +    A  +
Sbjct: 198 PVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDDALREACLK 242


>gi|156938169|ref|YP_001435965.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis
           KIN4/I]
 gi|156567153|gb|ABU82558.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis
           KIN4/I]
          Length = 621

 Score =  257 bits (658), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 84/369 (22%), Positives = 156/369 (42%), Gaps = 37/369 (10%)

Query: 1   MQLRH-----KTLTSAQDLYNANLIKKEQIDEIKEISN-HYSIALTPVIANLINPHN--P 52
              ++     + +   ++L     + +E    +++    +    +TP   +L +      
Sbjct: 215 WHYKNALRGKRAIKVLKELVK--GLSEEDWKALEDAVKYNVPFGITPYYLHLFDFDEGWK 272

Query: 53  ND-PIARQFIP---QKEELNILPEERE---DPIGDNNHSPLKGIVHRYPDRILLKLLHVC 105
           +D  + RQ +P     +E+    +ERE   D +G+++ SP   I  RYP   +LK  H C
Sbjct: 273 HDYAVRRQVLPPLHYVKEMVAHLDEREYYFDFMGEHDTSPHPLITRRYPMVAILKAAHTC 332

Query: 106 PVYCRFCFRRE--MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
           P  C +C R    M    K  + +    + A+ +  E   I +V+ TGGDP IL  + ++
Sbjct: 333 PQICVYCQRNWEIMTAMDKEAIPTRMTIDEAIDWFAEHPNIIDVLVTGGDPFILRDEDIE 392

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPYEF 219
            ++K L  + HV+++RF +R P+  P RI PE  + L        + +++  H  H YE 
Sbjct: 393 HIVKRLSELDHVKMIRFGTRTPVTVPMRITPEFAEMLGSYIEPGKRNIHVVTHVEHAYEV 452

Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
           + E   A++ L    I + +Q V     +   E  + L      + I PYY  +P     
Sbjct: 453 TPEMAEAVTNLRKNKIYVYNQQVFTFWNSRRFET-SALRIALKSIGIDPYYTFYPKGKWE 511

Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339
           T  + + +     I+   KE+            LPG + + +    N+ ++G        
Sbjct: 512 TKDYLVPVAR---ILQERKEE---------ARVLPGTF-RTEEPVFNVPRLGKNHLRAWQ 558

Query: 340 HHNIVHDYP 348
            H ++   P
Sbjct: 559 DHELIMIRP 567


>gi|212224418|ref|YP_002307654.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1]
 gi|212009375|gb|ACJ16757.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1]
          Length = 636

 Score =  256 bits (654), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 76/326 (23%), Positives = 139/326 (42%), Gaps = 24/326 (7%)

Query: 1   MQLRH-----KTLTSAQDLYNANLI--KKEQIDEIKEISN-HYSIALTPVIANLINPHNP 52
            Q  H     K L   ++L    ++   +E ++E++          +TP   +L +   P
Sbjct: 228 WQFSHVLKGRKGLEILRELNELGIVKVPEEDLEEVERAVKYRIPWGITPYYLHLWDFKEP 287

Query: 53  ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103
              +  + RQ +P K  ++ +   R+D       +G+++ SP+  +  RY    +LK   
Sbjct: 288 YKEDRHVRRQVMPPKWYMDNMILHRKDREYAFDFMGEHDTSPIDLVTRRYVMIAILKAFD 347

Query: 104 VCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
            CP  C +C R   V      G+       E A+ +  E+  + +V+ TGGDP  LS+K 
Sbjct: 348 TCPQICVYCQRNWEVLEPFMAGSFPGWDKIEKAIEWFGERESMIDVLITGGDPFALSNKI 407

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPY 217
           + K++  L    HV  +R+ +R+P+  P R+  EL + L        + V ++ H    Y
Sbjct: 408 IDKIMSRLSEFDHVINIRWGTRIPVTVPMRVTEELAEILGSYIEPGKRNVAVSTHVETAY 467

Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
           E + E   A+  L   GI + +Q V  + ++   E +A L     ++ I PYY  +P   
Sbjct: 468 EVTPEMARAVYNLRRQGIYVYNQLVYQRNVSRRFENVA-LRIALKKIGIDPYYTFYPKGK 526

Query: 278 AGTSHFRLTIEEGQKIVASLKEKISG 303
                + + I    +        + G
Sbjct: 527 IEQRDYLVPIARVIQERKEEARLLPG 552


>gi|226327321|ref|ZP_03802839.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198]
 gi|225204539|gb|EEG86893.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198]
          Length = 174

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 89/169 (52%)

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
           +     L  ++  L  I H++ LR HSR+P+V P R+   L Q L+++     + +H NH
Sbjct: 1   MAKDDELDWLITQLEAIPHLKRLRIHSRLPVVIPARVTDALCQRLQQSRLQNIMVLHTNH 60

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
             E  +    A S+L  A + LL+Q VLL+G+ND  E+LA+L R   +  + PYYLH  D
Sbjct: 61  ANEMDDALREACSKLKKANVTLLNQGVLLRGVNDSAEVLADLSRALFDAGVMPYYLHVLD 120

Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
              G +HF +   E ++I+ +L   +SG   P    ++ G   K  +D 
Sbjct: 121 KVQGAAHFMVPDSEAREIMKALMSLVSGYMVPKLTREIGGEPSKTLLDL 169


>gi|262045422|ref|ZP_06018445.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
 gi|259037251|gb|EEW38499.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis
           ATCC 13884]
          Length = 174

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 60/169 (35%), Positives = 89/169 (52%)

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
           +     L  ++  L  I HV+ LR HSR+PIV P RI   L    + +   V +  H NH
Sbjct: 1   MAKDHELDWLMTQLEAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNH 60

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
             E   E  AA++ L  AG+ LL+QSVLL+G+ND+ + LA+L     +  + PYYLH  D
Sbjct: 61  ANEIDGEFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLD 120

Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
              G +HF ++ +E ++I+  L   ISG   P    ++ G   K  +D 
Sbjct: 121 RVQGAAHFMVSDDEAREIMRELLTLISGYMVPKMAREIGGEPSKTPLDL 169


>gi|289671289|ref|ZP_06492364.1| lysine 2,3-aminomutase [Xanthomonas campestris pv. musacearum
           NCPPB4381]
          Length = 188

 Score =  245 bits (626), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 70/188 (37%), Positives = 105/188 (55%)

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           +A I     I EV+ +GGDPL L+  +L ++   L  I H++ LR HSR+PIV P+R++ 
Sbjct: 1   MAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDA 60

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
            L+  L++   PV   +HANH  EF     AA+  L +AG  LL+Q+VLL+G+ND  + L
Sbjct: 61  PLLAWLRQLPWPVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDAL 120

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
           A L        + PYYLH  D  AG +HF +     + +   L  ++SG   P  + ++P
Sbjct: 121 AALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIP 180

Query: 315 GGYGKVKI 322
           G  GK  +
Sbjct: 181 GDTGKRPL 188


>gi|293393237|ref|ZP_06637552.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582]
 gi|291424383|gb|EFE97597.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582]
          Length = 174

 Score =  245 bits (625), Expect = 1e-62,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 89/169 (52%)

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
           +     L  ++  L  I H++ LR HSR+P+V P R+   L Q L  +   V +  H NH
Sbjct: 1   MAKDHELDWLIGELEAIPHLKRLRIHSRLPVVIPARVTEALCQRLAASRLQVLMVTHINH 60

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275
             E       ++++L  AG+ LL+QSVLL+ INDD + LA L     +  I PYY+H  D
Sbjct: 61  ANEIDAALSTSMAQLRRAGVTLLNQSVLLRHINDDADTLAALSNALFDAGILPYYIHVLD 120

Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
              G +HF ++ ++ ++I+ +L  K+SG   P    ++ G   K  +D 
Sbjct: 121 KVQGAAHFMVSDDQAREIMKALLSKVSGYLVPRLTREIGGEPSKTPLDL 169


>gi|111019966|ref|YP_702938.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
 gi|110819496|gb|ABG94780.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1]
          Length = 440

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 78/341 (22%), Positives = 141/341 (41%), Gaps = 47/341 (13%)

Query: 26  DEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQFIPQKEEL---------------- 67
            E   +S      ++  + + LI+    P+DPI R   P ++ L                
Sbjct: 37  HEAHVVSQVLPFKVSSYVVDELIDWGRAPDDPIYRLTFPHRDMLEIEHFDLIERAVAQGD 96

Query: 68  ---------------NILPEERED-PIGDNNHSPLKGIVHRYPDRILLKL--LHVCPVYC 109
                          N  P ++    +  ++     G+ H+Y + +L+       C  YC
Sbjct: 97  RGTVRQAVDTVRAALNPHPGDQLSMNVPQHDDIDGSGMQHKYAETLLVFPRQGQTCHSYC 156

Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
            +CFR           ++    EA   Y+     I +V+ TGGDPL++  + L   L+ L
Sbjct: 157 GYCFRWAQFVDTPDLKMAMSGPEAMTRYLDLHPGITDVLLTGGDPLVMRTELLASYLEPL 216

Query: 170 RY--IKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF 219
                +HV+ +R  ++     P R+           L++ L  AGK V + +H +H  E 
Sbjct: 217 LEPEREHVETIRIGTKAVSFWPYRLLAGPEADDLLRLLERLTAAGKHVAMMLHLSHVAEL 276

Query: 220 -SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
            ++ A  A++RLA+ G +L +Q+ +++ +NDDP   A+L +  V  R+ PYY+       
Sbjct: 277 QTDAARTALARLASTGAVLRAQAPVVRHVNDDPRTWADLWQAQVRNRVVPYYMFVERDTG 336

Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
              +F L +     I     +++SGL +      +    GK
Sbjct: 337 ARPYFGLPLARAVDIYREALQRVSGLGRTARGPVMSASPGK 377


>gi|58426924|gb|AAW75961.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 202

 Score =  235 bits (601), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 65/179 (36%), Positives = 97/179 (54%)

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I EV+ +GGDPL L+  +L ++   L  I H++ LR HSR+PIV P+R++  L+  L+  
Sbjct: 24  IDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLLAWLRSL 83

Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
             P    +HANH  EF      A+  L + G  LL+Q+VLL G+ND  + LA L      
Sbjct: 84  PWPAAFVLHANHANEFDSAVDMAMHALRDTGAQLLNQAVLLGGVNDSVDALAALSERSFA 143

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             + PYYLH  D  AG +HF +     + +   L  ++SG   P  + ++PG  GK  +
Sbjct: 144 AGVLPYYLHQLDRVAGVAHFEVDDARARALHTELATRLSGYLVPRLVREIPGDTGKRPL 202


>gi|213585072|ref|ZP_03366898.1| hypothetical protein SentesTyph_29075 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 219

 Score =  233 bits (596), Expect = 2e-59,   Method: Composition-based stats.
 Identities = 61/200 (30%), Positives = 107/200 (53%), Gaps = 4/200 (2%)

Query: 8   LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66
           +T+  +L +   I+ ++ +   ++    +++ +       +   NP+DP+ RQ +  ++E
Sbjct: 23  VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
             + P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++     
Sbjct: 83  FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           + ++   AL YI    ++ E+IF+GGDPL+     L  +L  L  IKHV+ LR HSR+PI
Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199

Query: 187 VDPQRINPELIQCLKEAGKP 206
           V P RI  EL+    ++   
Sbjct: 200 VIPARITDELVARFDQSCLQ 219


>gi|253989648|ref|YP_003041004.1| hypothetical protein PAU_02168 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253781098|emb|CAQ84260.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 384

 Score =  222 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 85/333 (25%), Positives = 146/333 (43%), Gaps = 24/333 (7%)

Query: 33  NHYSIALTPVIANLINP-----HNPNDPIARQFIPQKEELNI-LPEEREDPIGDNNHSP- 85
           N   I +T      I+       +   P+ R   P KE L +  P E    + D  + P 
Sbjct: 35  NLLPIKVTRFFQQKIDEEVATLGHTEGPLHRMVYPTKERLLVCAPGEVAYFVDDRENMPE 94

Query: 86  -LKG-IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEK 141
              G I+ +Y +R L      C  +C++CFR++++  Q  T  +   K      +Y+   
Sbjct: 95  DAPGNIIQKYRNRALFMPTSTCVSHCQYCFRQDVLSEQHETGKTVLDKAILELDSYLSMH 154

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL 200
             I EVI +GGDP+ L  + LQ ++  ++    V+ +R H++     PQ   + E ++ L
Sbjct: 155 PDIQEVILSGGDPMTLPMESLQSIISAIKSHAQVKSIRIHTKTISYFPQVFKSDEKLRLL 214

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
             AG  +    H  HPYE  E     I R+ + GI   +Q  +L+ IND PE+L   ++T
Sbjct: 215 ASAGVRLVF--HLTHPYELCEVVRKTIKRIQDTGIRCYNQFPILRQINDHPEVLRRHLKT 272

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI-SGLCQPFYILDLPGGYGK 319
              L I+   +  PD    ++ F +++   + I+  L  +  S +    +++D     GK
Sbjct: 273 LDCLGIRNLSVFIPDPINFSALFSISLARLRNIINELNWRSPSWINSTRFVMDTKV--GK 330

Query: 320 VKI----DTHNIKKVGNGSYCITDHHNIVHDYP 348
           V++     TH   + G     I +       YP
Sbjct: 331 VRVRREDMTHYDAERG---IAIFERDGKTIHYP 360


>gi|83859269|ref|ZP_00952790.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83852716|gb|EAP90569.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 481

 Score =  222 bits (567), Expect = 6e-56,   Method: Composition-based stats.
 Identities = 72/336 (21%), Positives = 137/336 (40%), Gaps = 47/336 (13%)

Query: 21  KKEQIDEIKE--ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78
             E++DE++   ISN      T    +L         +      + EE+  L  E  DP 
Sbjct: 61  SAEELDELEAAGISNRLPPRATGYYLDLAKRSTA---VKNLIKARPEEMEDLSGE-ADPS 116

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
               +SP+ G++H+Y +  L+ ++  C  +CR+C+R + +  + G   +S        YI
Sbjct: 117 NQLKYSPIPGLLHKY-ELCLVYVVRTCSSWCRYCYRSDFLTGKTGKDTAS--IHEVKDYI 173

Query: 139 QEK------------SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +               ++ EV+ +GGDP++LS++ L   L  L     V+++R  ++   
Sbjct: 174 ETHNAKVERGEITHKPKVREVLLSGGDPMVLSNRNLFDYLNGLAEAG-VEVIRIGTKEMA 232

Query: 187 VDPQRINPELIQCLKEAG--KP---VYIAIHANHPYEF-------------------SEE 222
             P+R +    + L       P   V   +H  HP EF                   +  
Sbjct: 233 FYPERFDDNFFRMLDLFHEVHPQVLVAFMVHFTHPDEFLRLDVNGDYVRDERGRPLRNPL 292

Query: 223 AIAAISRLA-NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281
              A +RL     + L +Q+ ++ G+NDD + L  + +    + +  +Y        G  
Sbjct: 293 VEQAATRLRARPFVTLENQTPIIDGVNDDADALRLMQQELKRMGVNNHYFFQCREIEGFR 352

Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
            F + +E+  K+ A  +  +SG+ +  + L    G 
Sbjct: 353 AFAVPVEKAWKLHAESQHGLSGIERSRFALSTEAGK 388


>gi|251799361|ref|YP_003014092.1| hypothetical protein Pjdr2_5396 [Paenibacillus sp. JDR-2]
 gi|247546987|gb|ACT04006.1| conserved hypothetical protein [Paenibacillus sp. JDR-2]
          Length = 336

 Score =  219 bits (558), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 83/350 (23%), Positives = 155/350 (44%), Gaps = 68/350 (19%)

Query: 20  IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79
           + + + + +K+        +     NLI+  +P DPI +  I    E    P   ++   
Sbjct: 14  LSEAERERLKK-----HFRVNDYYLNLIDWDDPKDPIRKHLIAAAGE---APHGIQEFTW 65

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +       G  H Y   +LL +                                 +AYI 
Sbjct: 66  EAA-----GCKHIYQSMVLLPVSQA---------------------------AEGIAYIA 93

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--LI 197
           E ++I +V+ TG D L+L   +L  +++ LR I+H+  +R  SR+P+ +P RI  +  L+
Sbjct: 94  EHNEIHKVVLTG-DSLMLGIAKLTSIIEQLRDIEHIGTIRLDSRMPVHNPMRIYEDHALL 152

Query: 198 QCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
           + L +     K +Y+    NHP E + EA  A + L  AG+++L+Q+ ++KG+N+DP +L
Sbjct: 153 KMLSQFSSPEKRIYLMTTINHPRELTAEAKKAFNALHQAGVVVLNQTPIVKGVNNDPLLL 212

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAG--------TSHFRLTIEEGQKIVASLKEKISGLCQ 306
             L+    +  + PY        +          + F + +++ +++ A L ++I  L  
Sbjct: 213 GKLIDQLSQAGVSPYSFIINRPNSSYPESSLSLQTQFSI-VQQAKELTAELGKRIRLLMA 271

Query: 307 PFYI----LDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
             Y     LD+ G  GK  +  H+ ++ G G +       I+ D PP++S
Sbjct: 272 HDYGKVELLDIEG--GKAYVKYHHYQEEGKGRF-------IMLDCPPEAS 312


>gi|302539601|ref|ZP_07291943.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
           [Streptomyces hygroscopicus ATCC 53653]
 gi|302457219|gb|EFL20312.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family
           [Streptomyces himastatinicus ATCC 53653]
          Length = 362

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 84/320 (26%), Positives = 137/320 (42%), Gaps = 20/320 (6%)

Query: 33  NHYSIALTPVIANLINPHNPNDP-IARQFIPQKEELNILPEEREDPIGDNNHSP-----L 86
             ++  ++P +   I       P +  Q++    E      E          +      L
Sbjct: 7   GVFAEKISPYLRKKIEEAGEPLPFLDLQYVVDPSEAVEQTFEVARHYQSEMGTVFEGREL 66

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--- 143
           +G+   Y   +L++   +C  +CR+C R    G    T LS +D E    Y     +   
Sbjct: 67  RGVEKLYRRTLLVEPTTICAAHCRWCIR----GQYDTTTLSREDLEFIARYCGTAPENQD 122

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           + EV+ TGGDPLIL   R++ +L  L      V+I+R  +RVP+ DP+RI+  +   L+ 
Sbjct: 123 VREVLVTGGDPLILID-RIEWLLDALEEHAPQVEIVRIATRVPLQDPRRIDARMKHALRR 181

Query: 203 AGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
                V +A H NH  E   E   A + L  AG  +  Q+VLL+G+ND+ + L  L    
Sbjct: 182 RSTFRVEVATHINHKGELFPEVREAYAALQEAGARIYDQTVLLRGLNDNLDTLVELFDEL 241

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL--KEKISGLCQPFYILDLPGGYGK 319
             + I+ +YL H     G  H R ++ EG ++   L      SG  +P +   L    GK
Sbjct: 242 RHMDIEAHYLFHCVPIRGMDHHRTSVAEGLELHRRLGASGLTSGRTRPHFT--LMTDVGK 299

Query: 320 VKIDTHNIKKVGNGSYCITD 339
           V +   +I      +  +  
Sbjct: 300 VPLYEGSIIDRDEHNRILLQ 319


>gi|289524601|ref|ZP_06441455.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289502159|gb|EFD23323.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 169

 Score =  218 bits (555), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 68/171 (39%), Positives = 106/171 (61%), Gaps = 2/171 (1%)

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
             E N   E+  DP+ ++ ++P+ G VHRYPDR +L +   C +YCRFC RR   G +  
Sbjct: 1   SAERNTAVEDFHDPLAEDRYAPVPGFVHRYPDRGILLVTDQCSMYCRFCTRRRFAG-EID 59

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
              S ++ +AA+ YI++   + +++ TGGDPL +    L+ +L++LR I HV+I+R  +R
Sbjct: 60  RPKSREEMQAAIDYIEKTEALRDILITGGDPLTMEDDNLEWLLRSLRRIPHVEIIRIGTR 119

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           VP V PQRI   L+  LK+   P++I +H NHP E +  +  A++ LANAG
Sbjct: 120 VPAVMPQRITNSLVTMLKKF-HPLWINVHFNHPKEITPHSARALNILANAG 169


>gi|226312788|ref|YP_002772682.1| hypothetical protein BBR47_32010 [Brevibacillus brevis NBRC 100599]
 gi|226095736|dbj|BAH44178.1| hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 421

 Score =  216 bits (551), Expect = 4e-54,   Method: Composition-based stats.
 Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 21/359 (5%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K       +      +KE+   + E  ++    +T   A LI   + ++P   Q I    
Sbjct: 16  KGFEEFATIVGFTEAEKEERGALLE-QSYMPFKVTRYYAELI--ASQSEPYRTQMI---N 69

Query: 66  ELNILPE-----EREDPIGDNNHSP--LKGIVHRYPDRILLKLLHVCPVYCRFCFR-REM 117
            +   P       R DP G+ ++       + H+Y   +LL +   C   C+FC++  E+
Sbjct: 70  IVLPPPGVKPYKGRFDPYGNKSYRQDETAFLQHKYKKTLLLHIDDFCIANCQFCYKVNEI 129

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-SHKRLQKVLKTLRYIKHVQ 176
                G        E A+ Y++    I  V+FTGGDP        L K++ TL  +K ++
Sbjct: 130 RHEDIGYTNIMDKAERAVQYLEAHPYIDNVLFTGGDPASFRKTSDLIKLISTLLSVKSIR 189

Query: 177 ILRFHSRVPIVDPQRINP-ELIQCLKE----AGKPVYIAIHANHPYEFSEEAIAAISRLA 231
           ++RF ++    DP R    EL+    +     GK V +    NHP E S+ +I A   L 
Sbjct: 190 LVRFATKALAYDPARFLDGELLAFFDQVRQTPGKQVSVISQFNHPGEISDVSIQATQALL 249

Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
           + G+ +  Q  +++G+ND  E L +L R F++ RI  YYL       G   + + ++E  
Sbjct: 250 SVGVQIRGQPAIIRGVNDSVETLIDLQRKFLDNRIISYYLTVFMPVRGVEQYAIPLDEAF 309

Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350
           + VA  K  + GL +   +L     +GK++I              +  H  +  DY P+
Sbjct: 310 RNVAESKRNLGGLEK-KGVLLTSHDFGKLEICGFYPTAERPEKIVLKWHQAVGPDYLPE 367


>gi|302337139|ref|YP_003802345.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
 gi|301634324|gb|ADK79751.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 818

 Score =  211 bits (537), Expect = 2e-52,   Method: Composition-based stats.
 Identities = 83/330 (25%), Positives = 138/330 (41%), Gaps = 34/330 (10%)

Query: 7   TLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIAN--LINPHNPNDPIARQFIP 62
           ++     L     +   +    E++++   Y + L+       L++P      +A Q++P
Sbjct: 121 SIGDVDQLVAKTNLMVPEAARTELQKVIETYPVRLSYHTIRQMLLSPD-----VAYQYMP 175

Query: 63  QKEELNILPEEREDPIGDNNHSP----LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
             EEL        DP+G  N          +   Y +R++  L   CPVYCRFCFR+   
Sbjct: 176 FVEEL--------DPVGHTNTWIGQFHQGLLEQMYQNRVIFLLNMSCPVYCRFCFRKHK- 226

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            S+     + +D   A+A++++   I E++ TGGDP  L+   +   +  L  I HVQ L
Sbjct: 227 ESRNEKNPTVEDVNRAIAHVEKSPSIKEIVLTGGDPF-LNRSNMAAAIDGLMGIDHVQSL 285

Query: 179 RFHSRVPIVDPQRI---NPELIQCLKE-------AGKPVYIAIHANHPYEFSEEAIAAIS 228
           R  +R     P+         +  LK+        GK + IA H  HP E S E++  I+
Sbjct: 286 RLATRSLAYYPELFLGKGEWYLNYLKQKNLELQLHGKRMEIATHFIHPDEVSPESLGIIT 345

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTI 287
            L  +GI +  Q+  L+  ND    L  L R       + +Y++       G S +   +
Sbjct: 346 ELVKSGIAVYVQTPFLQHCNDTGPELQKLFRLLRGAGAEMHYIYIPCSPIHGNSVYWSPL 405

Query: 288 EEGQKIVASLKEKISGLCQPFYILDLPGGY 317
            +G  I   L+  +S    P      P G 
Sbjct: 406 SDGIDIAEYLRAHLSDRSVPKICTATPIGK 435



 Score = 86.7 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 49/229 (21%), Positives = 88/229 (38%), Gaps = 28/229 (12%)

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
           EA + YI+  + I +VI      L      +  ++  +  I HV  +R         P+ 
Sbjct: 560 EADIDYIRSDTLISDVIIRTSSLLAEELHEISSLIGKIGTIDHVNAVRISLPEVNYAPES 619

Query: 192 INPELIQCLKE-------AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           I+P +IQ L             + I     +  + +E   A + RL N GI + + + LL
Sbjct: 620 ISPAMIQHLASCNRLTVSNPLRLEIETWFINANQITEMHSALVRRLNNKGITVYANTPLL 679

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ------------K 292
             IND+P+ + NL   +    I+ ++L+         H    I++               
Sbjct: 680 GEINDNPDEIYNLTYAYRRAGIEFHHLYV------AGH---PIQKAWNEKHPIDMYDVVD 730

Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
           I + ++ + SG   P YIL  P G     + +  I   G+    +  + 
Sbjct: 731 IASKIRREGSGREGPRYILQTPLGDVYYGLTSSFIHGGGDIRVKLDSYD 779


>gi|224370563|ref|YP_002604727.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum
           HRM2]
 gi|223693280|gb|ACN16563.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum
           HRM2]
          Length = 819

 Score =  208 bits (530), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 83/375 (22%), Positives = 144/375 (38%), Gaps = 46/375 (12%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
           K  T  + L N   I  E   +I ++   Y +  +      +        +A Q++P KE
Sbjct: 124 KDKTQVERLANQV-IPPEDTADINQVIETYPVRFSMHTVRQMRVSKS---VACQYLPFKE 179

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           ELN +       IG  +      +   Y +R++  L   CPVYCRFCFR+    S+    
Sbjct: 180 ELNSV-GHTNTWIGQFHQG---LLEQMYQNRVIFLLNMTCPVYCRFCFRKHK-DSRNEKN 234

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
               D   A+A+++    I E++ TGGDP I +   +++ ++ L+ I HV+ LR  +R  
Sbjct: 235 PGVDDVSKAVAHVKNSPAIKEIVITGGDPFI-NRNNMERAIQELKEIDHVETLRLATRSI 293

Query: 186 IVDPQRINPELIQCLK----------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
              PQ    +  + L           + GK + +A H  HP E S ++++ IS L   GI
Sbjct: 294 AYYPQLFLKDNSRWLNYLKAKNLELMQKGKRIEVATHFIHPDEVSVQSLSIISDLVAGGI 353

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIV 294
            +  Q+  L+G ND+   L  L +       + +Y++       G S +   + +G +  
Sbjct: 354 GVYVQTPFLEGCNDNGPELVTLFQALRGAGAEIHYIYIPCSPIHGNSVYWSPLSKGIQAG 413

Query: 295 ASLKEKISGLCQPFYILDLPGGY------G---------------KVKIDTHNIKK---- 329
             L+   S    P      P G       G               +         +    
Sbjct: 414 RYLRAHASDRSIPRICTATPIGKMDWNTSGWAVEQDKENPDFIWLRTPYTPDYFNRFAPV 473

Query: 330 VGNGSYCITDHHNIV 344
             +      +    +
Sbjct: 474 ANDLEVIRRNDEGTI 488



 Score = 65.5 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 19/195 (9%)

Query: 132 EAALAYIQEKSQIWEVIFTGG--DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
           +A + YI+ +  I++V+      DP+  S  R++++  TL+ ++HV  LR  S   +  P
Sbjct: 564 DADIDYIKSQRDIFDVVLVSKTKDPVQ-SAARIRQLATTLKEVQHVNSLRIRSLDFVHHP 622

Query: 190 QRINPELIQCLKEAG-------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242
                 L++ L             V I        E +         L   GI       
Sbjct: 623 DTYTSGLVETLGRLNCLSVANPLRVEIETWVVCADELTPRQQQITQALYRRGITTYFNVA 682

Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLH------HPDLAAGTSHFRLTIEEGQKIVAS 296
           L+ G+ND+ + +  +  T     ++ ++++         +        + +++   I   
Sbjct: 683 LITGVNDNEDEIQKIAYTSRGFGMQFHHVYLAGLEIQNRMNGENK---VKVDDIFDIATR 739

Query: 297 LKEKISGLCQPFYIL 311
           ++ + SG   P YI+
Sbjct: 740 VRREGSGREIPGYII 754


>gi|124003742|ref|ZP_01688590.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
 gi|123990797|gb|EAY30264.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
          Length = 424

 Score =  208 bits (529), Expect = 1e-51,   Method: Composition-based stats.
 Identities = 78/346 (22%), Positives = 137/346 (39%), Gaps = 47/346 (13%)

Query: 10  SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKE-- 65
           S +       + K Q D+   +SN +       + + LI+  N   DP+ R     K   
Sbjct: 10  SFKKTKYYGRLSKAQQDDFDLLSNIFYFKTNNYVLDQLIDWDNLETDPLFRLNFLHKNVL 69

Query: 66  -------------------------ELNILPEEREDPIGDN-----NHSPLKGIVHRYPD 95
                                    EL       + P  +          +KG+   + +
Sbjct: 70  SEADYQQLLSLYQAGASIEVLQPFIELIRKKTTPQIPYDEKCFPTAGGERIKGLYRSFNN 129

Query: 96  RILLK---LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
            I L    +L  C  YC +CFR      S+  +  S KD +  + Y++   +I E +FTG
Sbjct: 130 VISLFPDPMLKTCHAYCSYCFRWIAFNNSEVQSYTSYKDPQTPVTYLKANPEINETLFTG 189

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEA 203
            DPL L+  ++++ +  L  I  V  +RF+++     P R           EL + +  +
Sbjct: 190 ADPLTLTAAKIKEYIDPLLTIDSVTTIRFNTKALTWWPFRFTTDKDAKNILELFKHIVAS 249

Query: 204 GKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           G+ +    H  H  E   +  I A+  +   G  ++ Q  +++GIND  E   NL    V
Sbjct: 250 GRTLTFCAHLTHVKELQNDNVIEAVKNIQATGAKIICQGPVVEGINDTIEDWVNLWSQEV 309

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
            L ++PYY+         + FR+ + +   I    ++++ GL QPF
Sbjct: 310 ALGLQPYYMFVELNHNAEASFRIPLAKAVHIFQEAEKRVKGLQQPF 355


>gi|163784748|ref|ZP_02179553.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879982|gb|EDP73681.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 250

 Score =  204 bits (519), Expect = 2e-50,   Method: Composition-based stats.
 Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 13/198 (6%)

Query: 154 PLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINP-----ELIQCLKE---A 203
           PLI+    L++ ++ +    I H++ +R  ++     P R        EL+   K+    
Sbjct: 1   PLIMKTHVLKQYIEPILEANIPHLKTIRIGTKALGFWPYRFLTDNDAQELLDLFKKIVDK 60

Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
           G  +    H NH  E  ++E   A+ ++   G ++ +QS +L+ IND+P++ A + +  V
Sbjct: 61  GYHLAYMAHFNHYKELETDEVKEAVQKIRETGAVIRTQSPILRHINDNPDVWAKMWKEQV 120

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
           +  + PYY+          +F + I    +I     +K+SGL +      +    GK++I
Sbjct: 121 KQGMIPYYMFMARDTGAQHYFGVPIVRAWEIFREAYQKVSGLARTVKGPSMSATPGKIRI 180

Query: 323 DTHNIKKVGNGSYCITDH 340
               + ++    Y + D 
Sbjct: 181 L--GVSEINGKKYIVLDF 196


>gi|295401597|ref|ZP_06811565.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976364|gb|EFG51974.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 218

 Score =  197 bits (501), Expect = 3e-48,   Method: Composition-based stats.
 Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 11/178 (6%)

Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEA 223
           +R I HV+I+RF S++P+ +P RI  + EL+   ++     K +Y+  H NHP E +EEA
Sbjct: 1   MRAIDHVKIIRFGSKLPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEA 60

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283
             A   L +AG+I+++Q+ +LKGINDDPE+LA L+       + PYY       AG S F
Sbjct: 61  RKAFQALHDAGVIVVNQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDF 120

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341
            LT+E+  +IV   K + SGL +   ++ +    GK++I       + NG   +  H 
Sbjct: 121 VLTLEKVYQIVEQAKARTSGLGKRVRLV-MSHSSGKIEI-----LAIENGKAYLKYHQ 172


>gi|213416979|ref|ZP_03350123.1| hypothetical protein Salmonentericaenterica_03062 [Salmonella
           enterica subsp. enterica serovar Typhi str. E01-6750]
          Length = 141

 Score =  196 bits (498), Expect = 5e-48,   Method: Composition-based stats.
 Identities = 46/137 (33%), Positives = 72/137 (52%)

Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
           P RI  EL+    ++   + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G+N
Sbjct: 1   PARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVN 60

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           D+ + LANL     +  + PYYLH  D   G +HF +T +E ++I+  L   +SG   P 
Sbjct: 61  DNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPR 120

Query: 309 YILDLPGGYGKVKIDTH 325
              ++ G   K  +D  
Sbjct: 121 LAREIGGEPSKTPLDLQ 137


>gi|289665700|ref|ZP_06487281.1| hypothetical protein XcampvN_22139 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
          Length = 217

 Score =  192 bits (489), Expect = 6e-47,   Method: Composition-based stats.
 Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 3/198 (1%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q + +  +   + L     +  +        +  + + +       +   + +DP+ RQ
Sbjct: 22  WQQQWRDAVRDPRVLLEQLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+CFRR    
Sbjct: 82  VLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +++    +      A A I     I EV+ +GGDPL L+  +L ++   L  I H++ LR
Sbjct: 142 AEE--TAARDGWREAGAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLR 199

Query: 180 FHSRVPIVDPQRINPELI 197
            HSR+PIV P+R++  L+
Sbjct: 200 IHSRLPIVLPERVDAPLL 217


>gi|290474686|ref|YP_003467566.1| Arginine aminomutase (fragment) [Xenorhabdus bovienii SS-2004]
 gi|289173999|emb|CBJ80786.1| Arginine aminomutase, putative (fragment) [Xenorhabdus bovienii
           SS-2004]
          Length = 244

 Score =  189 bits (480), Expect = 7e-46,   Method: Composition-based stats.
 Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 12/213 (5%)

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            + EVI +GGDPL+L+  +L + L ++R I+   ++R HSR    +P RI   LI+ LK+
Sbjct: 31  SVEEVILSGGDPLMLTDNKLNESLASIREIRDDLLIRIHSRALTFNPYRITDALIETLKK 90

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
                   +H  HP+E SEE   A+ R+ +A  I+ S    L+GIND+ + L  L     
Sbjct: 91  YRIN-AFGVHVCHPFELSEEFQTAVRRIQSAVPIVFSNMPFLRGINDNEKTLHKLFIDLY 149

Query: 263 ELRIKPYYLHHPDL-AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK-- 319
            + +KPYYL+H    + G+S ++ +I +   I++ LK +IS +  P Y+  LP   GK  
Sbjct: 150 RMGVKPYYLYHFMPFSPGSSEYKASINDAISIMSKLKRRISNIALPEYV--LPHMKGKFT 207

Query: 320 VKIDTH-----NIKKV-GNGSYCITDHHNIVHD 346
           V + TH       + + G   Y   +  N   +
Sbjct: 208 VPLFTHPQEMPYFETLNGKRYYRFINWQNEQCE 240


>gi|331005683|ref|ZP_08329048.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989]
 gi|330420506|gb|EGG94807.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989]
          Length = 146

 Score =  188 bits (479), Expect = 1e-45,   Method: Composition-based stats.
 Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 1/146 (0%)

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGII 236
           +R HSR+P+V P RI  E I+ + +      + +H NH  E  +     AIS++ NAGI 
Sbjct: 1   MRIHSRLPVVIPDRITAESIEWMSQTRLATVMVLHINHAQELKNGILRTAISQMKNAGIT 60

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           +L+QSVLLKGIND  +  A L  T  +  + PYYLH  D   G++HF    +  + +  +
Sbjct: 61  VLNQSVLLKGINDTLDTQAELSETLFDAGVLPYYLHVLDKVQGSAHFDTMDDRAKTLHKA 120

Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322
           +  K+ G   P  + ++     K+ +
Sbjct: 121 MTAKLPGYLVPKLVREVAHEPSKITV 146


>gi|212694782|ref|ZP_03302910.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855]
 gi|212662636|gb|EEB23210.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855]
          Length = 703

 Score =  186 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 124/320 (38%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
            + S  +L     N + +E +    +       + +TP   +L+NP     +D   R +I
Sbjct: 201 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 260

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              PQ  E   NI   E+ED + D   +           I  RYPD  +L    +   C 
Sbjct: 261 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +  +Q+ +++ TGGD L+ 
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380

Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +         H         +Q +R  SR+P+  P RIN EL+  L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          +   I  H   P E + EA  AI ++  AG  + +Q V     +    
Sbjct: 441 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500

Query: 253 ILANLMRTFVELRIKPYYLH 272
             A L +    L +  YY  
Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519


>gi|237727246|ref|ZP_04557727.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434102|gb|EEO44179.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 703

 Score =  186 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 124/320 (38%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
            + S  +L     N + +E +    +       + +TP   +L+NP     +D   R +I
Sbjct: 201 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 260

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              PQ  E   NI   E+ED + D   +           I  RYPD  +L    +   C 
Sbjct: 261 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +  +Q+ +++ TGGD L+ 
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380

Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +         H         +Q +R  SR+P+  P RIN EL+  L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          +   I  H   P E + EA  AI ++  AG  + +Q V     +    
Sbjct: 441 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500

Query: 253 ILANLMRTFVELRIKPYYLH 272
             A L +    L +  YY  
Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519


>gi|265750535|ref|ZP_06086598.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263237431|gb|EEZ22881.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 703

 Score =  186 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 72/320 (22%), Positives = 123/320 (38%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
            + S  +L     N + +E +    +       + +TP   +L+NP     +D   R +I
Sbjct: 201 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 260

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              PQ  E   NI   E+ED + D   +           I  RYPD  +L    +   C 
Sbjct: 261 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +  +Q+ +++ TGGD L+ 
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+P+  P RIN EL+  L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLQRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          +   I  H   P E + EA  AI ++  AG  + +Q V     +    
Sbjct: 441 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500

Query: 253 ILANLMRTFVELRIKPYYLH 272
             A L +    L +  YY  
Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519


>gi|325970018|ref|YP_004246209.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy]
 gi|324025256|gb|ADY12015.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy]
          Length = 710

 Score =  186 bits (474), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 66/326 (20%), Positives = 124/326 (38%), Gaps = 59/326 (18%)

Query: 5   HKTLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANLIN------PHNPN-D 54
           H  + SA DL       + ++ +  ++E       I  TP   +LI+        NP  D
Sbjct: 222 HFAIRSADDLNLYLAHSMDEKTLSLMREAQAKGIPIFATPYFLSLIDTRPLEKRENPRSD 281

Query: 55  PIARQFIPQKEEL-----NILPEEREDPI--GDNNHS----PLKGIVHRYPDRILLK--- 100
              R ++   ++L     +I+  E+ED    G+ N +    P   +  RYP+  +     
Sbjct: 282 EAIRSYLFYSKDLVQEFGSIVAWEKEDIARPGEPNAAGWLLPSHNVHRRYPNVAIFIPDT 341

Query: 101 LLHVCPVYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTG 151
           +   C   C +C R       +       +   K  +  L     Y +    +W+++ TG
Sbjct: 342 MGRACGGLCSYCQRMYDFQGGRFNFELEKLRPKKSWQEQLEQNMEYFRNDPYLWDILITG 401

Query: 152 GDPLILSHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINP 194
           GD  + S K L+ +L  +  +                   ++ +R  +++P+  PQR+  
Sbjct: 402 GDAFMSSVKSLKNILDAVLAMARQKIEDNEARSPEEQYAPMRRVRLGTKIPVYLPQRVTA 461

Query: 195 ELIQCLKEAGKPVYIA--------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           EL+Q L +  K   +          H +   E + E   A+ RL  +G  + +Q V    
Sbjct: 462 ELVQVLADFKKKAALVGIDQCVVQTHVSSAMEITPETRKAVKRLLASGWAVTNQEVFTVA 521

Query: 247 INDDPEILANLMRTFVELRIKPYYLH 272
            +      A L +   ++ + PYY  
Sbjct: 522 ASRRGHS-AKLRKVLNDIGVLPYYNF 546


>gi|237710948|ref|ZP_04541429.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229454792|gb|EEO60513.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 697

 Score =  186 bits (473), Expect = 4e-45,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 124/320 (38%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
            + S  +L     N + +E +    +       + +TP   +L+NP     +D   R +I
Sbjct: 195 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 254

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              PQ  E   NI   E+ED + D   +           I  RYPD  +L    +   C 
Sbjct: 255 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 314

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +  +Q+ +++ TGGD L+ 
Sbjct: 315 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 374

Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +         H         +Q +R  SR+P+  P RIN EL+  L
Sbjct: 375 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 434

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          +   I  H   P E + EA  AI ++  AG  + +Q V     +    
Sbjct: 435 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 494

Query: 253 ILANLMRTFVELRIKPYYLH 272
             A L +    L +  YY  
Sbjct: 495 T-AKLRKVLNGLGVLCYYTF 513


>gi|254883725|ref|ZP_05256435.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|254836518|gb|EET16827.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
          Length = 703

 Score =  186 bits (472), Expect = 6e-45,   Method: Composition-based stats.
 Identities = 70/320 (21%), Positives = 123/320 (38%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
            + S  +L     N + +E +    +       + +TP   +L+NP     +D   R +I
Sbjct: 201 AVKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 260

Query: 62  PQKEEL-----NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
               +L     NI   E+ED + D   +           I  RYPD  +L    +   C 
Sbjct: 261 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +  +Q+ +++ TGGD L+ 
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+P+  P RIN EL++ L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLQRAEGEKYAELQRVRLGSRLPVYLPMRINDELLEIL 440

Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E  +           I  H   P E + EA  AI ++  AG  + +Q V     +    
Sbjct: 441 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500

Query: 253 ILANLMRTFVELRIKPYYLH 272
             A L +    L +  YY  
Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519


>gi|319643449|ref|ZP_07998072.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A]
 gi|317384854|gb|EFV65810.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A]
          Length = 576

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 70/320 (21%), Positives = 123/320 (38%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
            + S  +L     N + +E +    +       + +TP   +L+NP     +D   R +I
Sbjct: 74  AVKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 133

Query: 62  PQKEEL-----NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
               +L     NI   E+ED + D   +           I  RYPD  +L    +   C 
Sbjct: 134 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 193

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +  +Q+ +++ TGGD L+ 
Sbjct: 194 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 253

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+P+  P RIN EL++ L
Sbjct: 254 QNKTLRNILEAVYKMAVRKRNANLQRAEGEKYAELQRVRLGSRLPVYLPMRINDELLEIL 313

Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E  +           I  H   P E + EA  AI ++  AG  + +Q V     +    
Sbjct: 314 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 373

Query: 253 ILANLMRTFVELRIKPYYLH 272
             A L +    L +  YY  
Sbjct: 374 T-AKLRKVLNGLGVLCYYTF 392


>gi|294777091|ref|ZP_06742548.1| KamA family protein [Bacteroides vulgatus PC510]
 gi|294448960|gb|EFG17503.1| KamA family protein [Bacteroides vulgatus PC510]
          Length = 703

 Score =  185 bits (471), Expect = 7e-45,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
            + S  +L     N + +E +    +       + +TP   +L+NP     +D   R +I
Sbjct: 201 AVKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 260

Query: 62  PQKEEL-----NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
               +L     NI   E+ED + D   +           I  RYPD  +L    +   C 
Sbjct: 261 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +  +Q+ +++ TGGD L+ 
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380

Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +         H         +Q +R  SR+P+  P RIN EL+  L
Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440

Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E  +           I  H   P E + EA  AI ++  AG  + +Q V     +    
Sbjct: 441 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500

Query: 253 ILANLMRTFVELRIKPYYLH 272
             A L +    L +  YY  
Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519


>gi|229004623|ref|ZP_04162361.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
 gi|228756664|gb|EEM05971.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4]
          Length = 233

 Score =  183 bits (466), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 11/180 (6%)

Query: 155 LILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPELIQCLKE---AG 204
           +I++  ++   +  L      H++ +R  ++     P R      + EL+Q  K+   +G
Sbjct: 1   MIMNASKIMHYISPLLEPEFDHIRNIRIGTKALTYWPNRFISDSDSEELLQFFKKIIDSG 60

Query: 205 KPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
           K + I  H  H  E  +     AI ++ + G I+ SQS ++  IN++PE    L    V+
Sbjct: 61  KSLAIMAHFTHWRELEAPLTQVAIKKIRDVGAIIRSQSPIIGHINNNPETWKILWEKQVQ 120

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
           L I PYY+          +F++ + E   I      ++SGL +      +   YGK+++ 
Sbjct: 121 LGIIPYYMFVERDTGSNRYFQVPLIEAYNIYRDAISRVSGLARTARGPVMSTTYGKIEVQ 180


>gi|71277819|ref|YP_270271.1| hypothetical protein CPS_3603 [Colwellia psychrerythraea 34H]
 gi|71143559|gb|AAZ24032.1| conserved domain protein [Colwellia psychrerythraea 34H]
          Length = 555

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 68/374 (18%), Positives = 133/374 (35%), Gaps = 59/374 (15%)

Query: 8   LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEE 66
                ++  AN I    I+E +     Y    T    N I+  N   D + +  +PQ   
Sbjct: 110 FRRVVEILVANNIDIGDIEERELFIEVYRFLATKHSLNSIDWTNFYEDSVFQLVMPQPNM 169

Query: 67  LN--ILPEEREDPIGD---------NNHSP---------------------LKGIVHRYP 94
           +N   + E     + +            SP                     L G  H+YP
Sbjct: 170 INKITVAEYLAASVAEKKVIVEEYQEKTSPHDGNQQLNKPWFENEQGEIEFLDGSQHKYP 229

Query: 95  DRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
              L+  K    C  +C +CFR   V   +   +  K+ +    Y++   ++ +++ TGG
Sbjct: 230 QCQLIFDKTTQNCFSFCTYCFRHAQVRGDEDMFI-QKEIDQIHRYLKVHEEVTDMLITGG 288

Query: 153 DPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINP-------ELIQCLKE 202
           D   +   R ++ +  L   R + H++ +R  +R     P+ I          +   + +
Sbjct: 289 DGGYMPASRFEQYVTPLLEDRDLLHIKTVRLATRALTFQPEMILSSKYDKMLAVFDKMHD 348

Query: 203 AGKPVYIAIHANHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN------------D 249
            G  +    H + P E  +   IAAI RL   G+++ SQS ++  I+             
Sbjct: 349 NGIQLAWMAHFSTPRELLNPTTIAAIRRLQRHGVVIRSQSPMMNHISLFENKDGSIDIDR 408

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309
             +   +L      + I  + ++         +F   +    +I   +  ++  + +P  
Sbjct: 409 SAQNWIDLSNILGTMLISFHSMYCARPTGEHHYFTAPLSAVSQIFDKIYRELPSINRPSR 468

Query: 310 ILDLPGGYGKVKID 323
            L +    GK+ I 
Sbjct: 469 HLSMTTSAGKISIM 482


>gi|150005257|ref|YP_001300001.1| hypothetical protein BVU_2729 [Bacteroides vulgatus ATCC 8482]
 gi|149933681|gb|ABR40379.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
          Length = 703

 Score =  183 bits (465), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
            + +  +L     N + +E +    +       + +TP   +L+NP     +D   R +I
Sbjct: 201 AVKNPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 260

Query: 62  PQKEEL-----NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
               +L     NI   E+ED + D   +           I  RYPD  +L    +   C 
Sbjct: 261 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +  +Q  +++ TGGD L+ 
Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQFRDILITGGDALMS 380

Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +LK +  +         H         +Q +R  SR+P+  P RIN EL++ L
Sbjct: 381 QNKTLRNILKAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLEIL 440

Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E  +           I  H   P E + EA  AI ++  AG  + +Q V     +    
Sbjct: 441 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500

Query: 253 ILANLMRTFVELRIKPYYLH 272
             A L +    L +  YY  
Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519


>gi|167624868|ref|YP_001675162.1| hypothetical protein Shal_2954 [Shewanella halifaxensis HAW-EB4]
 gi|167354890|gb|ABZ77503.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4]
          Length = 537

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 69/378 (18%), Positives = 131/378 (34%), Gaps = 70/378 (18%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELN------------- 68
           ++ +   E+   Y    T    N IN  + P D + +   PQ   +N             
Sbjct: 108 DEREFFVEV---YRFLATRHSLNSINWDDYPTDSVFQLVFPQPGMINAETTQAYIDASDP 164

Query: 69  -----------------------ILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLH 103
                                    P    D   +     L G  H+YP   L+  K   
Sbjct: 165 KARTQVAIEYMEKTNPHDGNQQLNKPWFVND---EGVLEFLDGSQHKYPQCQLVFDKTTQ 221

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C  +C +CFR   V   +   +  KD      Y++   ++ +++ TGGD   +   RL+
Sbjct: 222 NCFSFCTYCFRHAQVRGDEDMFI-QKDIAQLHEYLRRHKEVTDILITGGDGGYMPMSRLK 280

Query: 164 KVLKTLRYIK---HVQILRFHSRVPIVDP-------QRINPELIQCLKEAGKPVYIAIHA 213
           + +  L       HV+ +R  +R     P        +   EL   +++ G  +    H 
Sbjct: 281 QYVMPLIEDPSLLHVKNVRLATRALTFQPEIVLTEKYQPMLELFDTMRDNGVQLAWMAHF 340

Query: 214 NHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN------------DDPEILANLMRT 260
           + P E  +   +AAI RL N G+ + SQS ++  I+               +   +L   
Sbjct: 341 STPRELLNPSTLAAIRRLQNHGVNIRSQSPMMNHISLFMDDKGGVDVERSSQSWIDLSNI 400

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
              L I  + ++         ++   + +  KI   +   ++ + +P   + +    GK+
Sbjct: 401 LGMLCIGFHSMYCARPTGEHHYYTAPLADMSKIFNRIYRSLASINRPSRHISMTISAGKL 460

Query: 321 KIDTHNIKKVGNGSYCIT 338
            I   +I   G   + + 
Sbjct: 461 AILGTSIVN-GEKCFALQ 477


>gi|319901443|ref|YP_004161171.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108]
 gi|319416474|gb|ADV43585.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108]
          Length = 697

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 123/320 (38%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  + +          TP   +L+N  P+  +D   R +I
Sbjct: 201 AIKSPTELNRFLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTPNGYDDEALRSYI 260

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              PQ  E    I   ERED + +   +           I  RYP+  +L    +   C 
Sbjct: 261 LYSPQLVETYGQIHAWEREDIVEEGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320

Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S     +  T+   +  E      + Y +E +Q+ +++ TGGD L+ 
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLHPKESWEKKLRRLMNYFEEDAQLRDILITGGDALMS 380

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L  +  +                   +Q +R  SR+P   P RIN EL++ L
Sbjct: 381 QNKTLRNILDAVYRMAARKRKANEERPEGEKYAELQRIRLGSRLPAYLPMRINDELVEIL 440

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           K+          +   I  H   P E + EA   I +L +AG ++ +Q V     +    
Sbjct: 441 KKFKEKASTIGIRQFIIQTHFQTPLEVTPEAAKGIHKLLSAGWLIDNQLVYNVAASRRGH 500

Query: 253 ILANLMRTFVELRIKPYYLH 272
             A L +   +L +  YY  
Sbjct: 501 T-ARLRQILNQLGVVCYYTF 519


>gi|1369901|dbj|BAA12848.1| yjeK [Buchnera aphidicola]
 gi|2827006|gb|AAC38098.1| 39-kDa hypothetical protein [Buchnera aphidicola]
          Length = 144

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 55/140 (39%), Positives = 78/140 (55%)

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
            H+R+PIV P RI  +L Q    +   + I  H NHP E +E+   ++ +L  + +ILL+
Sbjct: 1   IHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDSLLKLKKSNVILLN 60

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
           QSVLLK IND+  ILA L     E  I PYYLH  D   GTSHF ++ ++ + I++ L +
Sbjct: 61  QSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVSNKKAKSIISDLMK 120

Query: 300 KISGLCQPFYILDLPGGYGK 319
            ISG   P  + D      K
Sbjct: 121 MISGFLVPRLVFDNGSKDNK 140


>gi|157376843|ref|YP_001475443.1| hypothetical protein Ssed_3711 [Shewanella sediminis HAW-EB3]
 gi|157319217|gb|ABV38315.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3]
          Length = 493

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 66/378 (17%), Positives = 132/378 (34%), Gaps = 70/378 (18%)

Query: 23  EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNIL----------- 70
           ++ +   E+   Y    T    N IN  + P D + +   PQ   ++             
Sbjct: 66  DERELFVEV---YRFLATRHTLNSINWDDYPTDSVFQLVFPQPGMIDEQTTQQYVGSPDA 122

Query: 71  -------------------------PEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLH 103
                                    P    D   +     L G  H+YP   L+  K   
Sbjct: 123 KARTQVAIDYMEKTNPHDGNQQLNKPWFVND---EGVLEFLDGSQHKYPQCQLVFDKTTQ 179

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C  +C +CFR   V   +   +  KD      Y++   ++ +++ TGGD   +   RL+
Sbjct: 180 NCFSFCTYCFRHAQVRGDEDMFI-QKDIAQLHEYLRRHPEVTDILITGGDGGYMPVSRLR 238

Query: 164 KVLKTLRYIK---HVQILRFHSRVPIVDPQRINP-------ELIQCLKEAGKPVYIAIHA 213
           + +  L       HV+ +R  +R     P+ +         EL   +++ G  +    H 
Sbjct: 239 QYVMPLIEDPSLLHVKNVRLATRALTFQPEMVLTEKYEPMLELFDTMRDNGVQLAWMAHF 298

Query: 214 NHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN------------DDPEILANLMRT 260
           + P E  +   IAAI RL N G+ + SQS ++  I+               +   +L   
Sbjct: 299 STPRELLNPSTIAAIRRLQNHGVNIRSQSPMMNHISLFKDEAGNVDVERSSQNWIDLATI 358

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
              + +  + ++         ++   + +  KI   +   ++ + +P   + +    GK+
Sbjct: 359 LGMMCVGFHSMYCARPTGEHHYYTAPLADMGKIFNRIYRSLASINRPSRHISMTISAGKL 418

Query: 321 KIDTHNIKKVGNGSYCIT 338
            I   ++   G   + + 
Sbjct: 419 AILGTSVVN-GEKCFALQ 435


>gi|330995846|ref|ZP_08319742.1| KamA family protein [Paraprevotella xylaniphila YIT 11841]
 gi|329574377|gb|EGG55948.1| KamA family protein [Paraprevotella xylaniphila YIT 11841]
          Length = 707

 Score =  179 bits (456), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 137/371 (36%), Gaps = 61/371 (16%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
            + SA +L       +  E +   ++       + +TP   +L+NP     +D   R ++
Sbjct: 200 AVKSAAELNRMLGGTLSGETMRVYQQAQEKGIPVFVTPYYLSLLNPTGKGYDDAAIRSYV 259

Query: 62  PQKEELN-----ILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
                L      I   ERED + +   +           I  RYP+  +L    +   C 
Sbjct: 260 IYSSRLVETFGGIRAWEREDIVEEGKPNVAGWLLPGGHNIHRRYPEVAILIPDTMGRACG 319

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   ++        + Y +  +QI +++ TGGD L+ 
Sbjct: 320 GLCASCQRMYDFQSRRLNFELEKLKPKENWNTRLRKLMDYFEHDTQIRDILITGGDALMS 379

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +  L+ +L  +  +                   +Q +R  +R+P+  P R++ EL+  L
Sbjct: 380 RNATLRNILDAVCKMAVRKRQANLSRPDGEKYAELQRVRLGTRLPVYLPMRVDDELLDIL 439

Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           ++  +         +++  H   P E + E+  AI R+ + G  + +Q V     +    
Sbjct: 440 RDFRQKAAEAGITQLFVQTHFQSPLEVTPESREAIRRILSTGWAVTNQLVYNVAASRRGH 499

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP----F 308
             A L +    L +  YY     +     ++ +     + +  S +EK  G   P     
Sbjct: 500 T-AKLRKVLNSLGVICYYTFT--VKGFEENYEVFAPNARSLQESAEEKAWGRLAPEAEHD 556

Query: 309 YILDLPGGYGK 319
           ++  L G   K
Sbjct: 557 FLESLGGAPDK 567


>gi|332877293|ref|ZP_08445041.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332684676|gb|EGJ57525.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 707

 Score =  179 bits (455), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 69/371 (18%), Positives = 137/371 (36%), Gaps = 61/371 (16%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
            + SA +L       +  E +   ++       + +TP   +L+NP     +D   R ++
Sbjct: 200 AVKSAAELNRMLDGTLSGETLRIYQQAQEKGIPVFVTPYYLSLLNPTGKGYDDAAIRSYV 259

Query: 62  PQKEELN-----ILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
                L      I   ERED + +   +           I  RYP+  +L    +   C 
Sbjct: 260 IYSSRLVETFGGIRAWEREDIVEEGKPNVAGWLLPGGHNIHRRYPEVAILIPDTMGRACG 319

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   ++        + Y +  +QI +++ TGGD L+ 
Sbjct: 320 GLCASCQRMYDFQSRRLNFELEKLKPKENWNTRLRKLMDYFEHDTQIRDILITGGDALMS 379

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +  L+ +L  +  +                   +Q +R  +R+P+  P R++ EL+  L
Sbjct: 380 RNATLRNILDAVCKMAVRKRQANLSRPDGEKYAELQRVRLGTRLPVYLPMRVDDELLDIL 439

Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           ++  +         +++  H   P E + E+  AI R+ + G  + +Q V     +    
Sbjct: 440 RDFRQKAAEAGITQLFVQTHFQSPLEVTPESREAIRRILSTGWAVTNQLVYNVAASRRGH 499

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP----F 308
             A L +    L +  YY     +     ++ +     + +  S +EK  G   P     
Sbjct: 500 T-AKLRKVLNSLGVICYYTFT--VKGFEENYEVFAPNARSLQESAEEKAWGRLAPEAEHD 556

Query: 309 YILDLPGGYGK 319
           ++  L G   K
Sbjct: 557 FLESLDGAPNK 567


>gi|329961990|ref|ZP_08300001.1| KamA family protein [Bacteroides fluxus YIT 12057]
 gi|328530638|gb|EGF57496.1| KamA family protein [Bacteroides fluxus YIT 12057]
          Length = 698

 Score =  179 bits (454), Expect = 7e-43,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 120/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
            + S  +L     N +  E +  + +          TP   +L++      +D   R +I
Sbjct: 201 AVKSPAELNRFLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLDCTGSGYDDEALRSYI 260

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              PQ  E    I   ERED + +   +           I  RYP+  +L    +   C 
Sbjct: 261 LYSPQLVETYGQIHAWEREDTVEEGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320

Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S     +  T+   +  E      +AY +E +Q+ +++ TGGD L+ 
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKESWEKKLRRLMAYFEEDAQLRDILITGGDALMS 380

Query: 158 SHKRLQKVLKTLRYIKH-----------------VQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L  +  +                   +Q +R  SR+P   P RIN EL++ L
Sbjct: 381 QNKTLRNILDAVYRMASRKRKANLERPEGEKYAELQRIRLGSRLPAYLPMRINDELVEIL 440

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          +   I  H   P E + EA   I +L  AG ++ +Q V     +    
Sbjct: 441 REFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +   +L +  YY  
Sbjct: 501 T-TRLRQILNQLGVVCYYTF 519


>gi|213584604|ref|ZP_03366430.1| hypothetical protein SentesTyph_26615 [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 125

 Score =  177 bits (451), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 41/120 (34%), Positives = 64/120 (53%)

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
            + +  H NH  E  E    A+ +L + G+ LL+QSVLL+G+ND+ + LANL     +  
Sbjct: 2   QILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAG 61

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
           + PYYLH  D   G +HF +T +E ++I+  L   +SG   P    ++ G   K  +D  
Sbjct: 62  VMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPRLAREIGGEPSKTPLDLQ 121


>gi|255690900|ref|ZP_05414575.1| KamA family protein [Bacteroides finegoldii DSM 17565]
 gi|260623540|gb|EEX46411.1| KamA family protein [Bacteroides finegoldii DSM 17565]
          Length = 713

 Score =  176 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 75/320 (23%), Positives = 121/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEI-SNHYSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLHRARKKRMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAEKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      T+   +  E  L     Y +E +Q+ +++ TGGD L+ 
Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWERKLRRLMTYFEEDTQLRDILITGGDALMS 385

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K LQ +L  +  +                   +Q +R  SR+P   P RIN EL++ L
Sbjct: 386 QNKTLQHILDAVYRMAVRKQKANLDRPEGEKYAELQRVRLGSRLPAYLPMRINDELVEIL 445

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 446 REFKEKASAAGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 506 T-TRLRQVLNSLGVMCYYTF 524


>gi|29349882|ref|NP_813385.1| hypothetical protein BT_4474 [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|29341793|gb|AAO79579.1| conserved hypothetical protein [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 720

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 70/320 (21%), Positives = 120/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 208 AVKSPAELNRFLGNSLSSETMYLLNRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      T+   +  +      + Y ++ +Q+ +++ TGGD L+ 
Sbjct: 328 GLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRRLMTYFEQDTQLRDILITGGDALMS 387

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+    P RIN EL+  L
Sbjct: 388 QNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVDIL 447

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 448 REFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 508 T-TRLRQVLNSLGVVCYYTF 526


>gi|298384138|ref|ZP_06993699.1| KamA family protein [Bacteroides sp. 1_1_14]
 gi|298263742|gb|EFI06605.1| KamA family protein [Bacteroides sp. 1_1_14]
          Length = 718

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 70/320 (21%), Positives = 120/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 206 AVKSPAELNRFLGNSLSSETMYLLNRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      T+   +  +      + Y ++ +Q+ +++ TGGD L+ 
Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRRLMTYFEQDTQLRDILITGGDALMS 385

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+    P RIN EL+  L
Sbjct: 386 QNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVDIL 445

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 446 REFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524


>gi|253569751|ref|ZP_04847160.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251840132|gb|EES68214.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 717

 Score =  175 bits (444), Expect = 1e-41,   Method: Composition-based stats.
 Identities = 70/320 (21%), Positives = 120/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 206 AVKSPAELNRFLGNSLSSETMYLLNRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      T+   +  +      + Y ++ +Q+ +++ TGGD L+ 
Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRRLMTYFEQDTQLRDILITGGDALMS 385

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+    P RIN EL+  L
Sbjct: 386 QNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVDIL 445

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 446 REFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524


>gi|298375250|ref|ZP_06985207.1| KamA family protein [Bacteroides sp. 3_1_19]
 gi|298267750|gb|EFI09406.1| KamA family protein [Bacteroides sp. 3_1_19]
          Length = 704

 Score =  174 bits (442), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%)

Query: 7   TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61
            + S  +L       +  E +  +           +TP   +L  I     +D   R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268

Query: 62  PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
               EL          E+ED +  +  +           I  RYP+  +L    +   C 
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +E +Q+ +++ TGGD L+ 
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +  L+K+L+ +  +                   +Q +R  SR+    P R+  EL+  L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRSEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448

Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E  +          YI  H   P E + EA  AI  +  AG  + +Q V     +    
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302
             A L +T   L +  YY     +     ++ +      +++E ++    +  ++ 
Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559


>gi|256839551|ref|ZP_05545060.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256738481|gb|EEU51806.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 704

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%)

Query: 7   TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61
            + S  +L       +  E +  +           +TP   +L  I     +D   R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268

Query: 62  PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
               EL          E+ED +  +  +           I  RYP+  +L    +   C 
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +E +Q+ +++ TGGD L+ 
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +  L+K+L+ +  +                   +Q +R  SR+    P R+  EL+  L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRSEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448

Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E  +          YI  H   P E + EA  AI  +  AG  + +Q V     +    
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302
             A L +T   L +  YY     +     ++ +      +++E ++    +  ++ 
Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559


>gi|255011024|ref|ZP_05283150.1| hypothetical protein Bfra3_17927 [Bacteroides fragilis 3_1_12]
 gi|313148829|ref|ZP_07811022.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137596|gb|EFR54956.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 699

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 69/320 (21%), Positives = 119/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61
            + +  +L     N +  E +  +            TP   +L+N +    ND   R +I
Sbjct: 203 AIKTPAELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTNGEGYNDEAIRSYI 262

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   ERED +     +           I  RYP+  +L    +   C 
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +  L     Y +E +Q+ +++ TGGD L+ 
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMTYFEEDTQLRDILITGGDALMS 382

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+    P RIN ELI+ L
Sbjct: 383 QNKTLRNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + +   AI ++ +AG ++ +Q V     +    
Sbjct: 443 REFKEKASAIGMKQFIIQTHFQSPLEVTPQTREAIRKILSAGWLITNQLVYTVAASRRGH 502

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521


>gi|150007262|ref|YP_001302005.1| hypothetical protein BDI_0607 [Parabacteroides distasonis ATCC
           8503]
 gi|149935686|gb|ABR42383.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
           8503]
          Length = 704

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%)

Query: 7   TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61
            + S  +L       +  E +  +           +TP   +L  I     +D   R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268

Query: 62  PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
               EL          E+ED +  +  +           I  RYP+  +L    +   C 
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +E +Q+ +++ TGGD L+ 
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +  L+K+L+ +  +                   +Q +R  SR+    P R+  EL+  L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448

Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E  +          YI  H   P E + EA  AI  +  AG  + +Q V     +    
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302
             A L +T   L +  YY     +     ++ +      +++E ++    +  ++ 
Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559


>gi|255014113|ref|ZP_05286239.1| hypothetical protein B2_09392 [Bacteroides sp. 2_1_7]
          Length = 706

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%)

Query: 7   TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61
            + S  +L       +  E +  +           +TP   +L  I     +D   R +I
Sbjct: 211 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 270

Query: 62  PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
               EL          E+ED +  +  +           I  RYP+  +L    +   C 
Sbjct: 271 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 330

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +E +Q+ +++ TGGD L+ 
Sbjct: 331 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 390

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +  L+K+L+ +  +                   +Q +R  SR+    P R+  EL+  L
Sbjct: 391 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 450

Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E  +          YI  H   P E + EA  AI  +  AG  + +Q V     +    
Sbjct: 451 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 510

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302
             A L +T   L +  YY     +     ++ +      +++E ++    +  ++ 
Sbjct: 511 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 561


>gi|218260892|ref|ZP_03475966.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii
           DSM 18315]
 gi|218224314|gb|EEC96964.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii
           DSM 18315]
          Length = 703

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 64/320 (20%), Positives = 112/320 (35%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI 61
              S  +L       +    +D +           +TP   +L+N +    +D   R +I
Sbjct: 208 AFKSPTELNYFLGGSLSAGTMDLLARARKKGMPFFVTPYYLSLLNTNTSGYDDATIRSYI 267

Query: 62  PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              EEL          E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 268 LYSEELVDTYGRIKAWEKEDIVVSGQPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 327

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      ++   +  +      + Y +E +Q+ +++ TGGD L+ 
Sbjct: 328 GLCASCQRMYDFQSERLNFDFESLKPKEAWDKKLRRLMRYFEEDAQLRDILITGGDALMS 387

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +  L  +L  +  +                   +Q +R  SR+    P RI  EL+  L
Sbjct: 388 QNATLCNILDAVYKMAVRKRKANESRPKGEKYAELQRVRLGSRLLAYLPLRITDELVDIL 447

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +               I  H   P E + EA  AI  + +AG I+ +Q V     +    
Sbjct: 448 RSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAIEAILSAGWIITNQMVYTVAASRRGH 507

Query: 253 ILANLMRTFVELRIKPYYLH 272
             A L +T   + +  YY  
Sbjct: 508 A-AKLRQTLNAMGVVCYYTF 526


>gi|262382166|ref|ZP_06075304.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|262297343|gb|EEY85273.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
          Length = 704

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%)

Query: 7   TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61
            + S  +L       +  E +  +           +TP   +L  I     +D   R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268

Query: 62  PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
               EL          E+ED +  +  +           I  RYP+  +L    +   C 
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +E +Q+ +++ TGGD L+ 
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +  L+K+L+ +  +                   +Q +R  SR+    P R+  EL+  L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448

Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E  +          YI  H   P E + EA  AI  +  AG  + +Q V     +    
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302
             A L +T   L +  YY     +     ++ +      +++E ++    +  ++ 
Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559


>gi|153809340|ref|ZP_01962008.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185]
 gi|149128110|gb|EDM19331.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185]
          Length = 712

 Score =  173 bits (440), Expect = 3e-41,   Method: Composition-based stats.
 Identities = 72/320 (22%), Positives = 121/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWILPDGHNIHRRYPEVAILIPDTMGRACG 325

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      T+   +  +  L     Y +E +Q+ +++ TGGD L+ 
Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+    P RIN EL++ L
Sbjct: 386 QNKTLRHILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVEIL 445

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524


>gi|295401598|ref|ZP_06811566.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294976365|gb|EFG51975.1| lysine 2,3-aminomutase YodO family protein [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 154

 Score =  173 bits (439), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 7/158 (4%)

Query: 4   RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63
           + K +T+ + +     I KE+ +++K+I+N Y   +     NLIN  +PNDPI +  IP 
Sbjct: 3   QPKYITNIEKITQ---IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPN 59

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
           + ELN       D   +  +  + G  H+Y    LL +  VC  YCRFCFR+ +  S   
Sbjct: 60  EGELNE--YGSWDASDEEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVK 117

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
             +S  D    + YI +  +I  V+ TGGD LIL+ K+
Sbjct: 118 EAMS--DVTPGIEYIAQTPEINNVLLTGGDSLILATKK 153


>gi|291515343|emb|CBK64553.1| L-lysine 2,3-aminomutase [Alistipes shahii WAL 8301]
          Length = 699

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 69/320 (21%), Positives = 121/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYN--ANLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L    A  +  E +  + +          TP   +L++      +D   R +I
Sbjct: 203 AVKSPSELNRFLAGSLSSETMYLLSKARKKGMPFFATPYYLSLLDVTGGGYDDAAIRSYI 262

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              PQ  E    I   ERED +     +           I  RYP+  +L    +   C 
Sbjct: 263 LYSPQLVETYGQIRAWEREDVVEAGRPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      T+   +  +      + Y +E +Q+ +++ TGGD L+ 
Sbjct: 323 GLCASCQRMYDFQSERLNFEFETLRPKESWDHKLRRLMNYFEEDTQLRDILITGGDALMS 382

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+P   P R+N EL++ L
Sbjct: 383 QNKTLRNILEAVCRMAGRKRRANARRPDGEKYAELQRVRLGSRLPAYLPMRVNDELVEIL 442

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG ++ +Q V     +    
Sbjct: 443 REFHEKASAVGVKQFVIQTHFQTPLEVTPEAEEAIRKILSAGWLITNQLVYTVAASRRGH 502

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521


>gi|60682845|ref|YP_212989.1| hypothetical protein BF3383 [Bacteroides fragilis NCTC 9343]
 gi|60494279|emb|CAH09074.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
          Length = 699

 Score =  172 bits (437), Expect = 6e-41,   Method: Composition-based stats.
 Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
            + +  +L     N +  E +  +            TP   +L+N      ND   R +I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   ERED +     +           I  RYP+  +L    +   C 
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      ++Y +E +Q+ +++ TGGD L+ 
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+    P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E +     AI ++ +AG ++ +Q V     +    
Sbjct: 443 REFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521


>gi|253565968|ref|ZP_04843422.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945072|gb|EES85510.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
          Length = 699

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
            + +  +L     N +  E +  +            TP   +L+N      ND   R +I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   ERED +     +           I  RYP+  +L    +   C 
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      ++Y +E +Q+ +++ TGGD L+ 
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+    P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E +     AI ++ +AG ++ +Q V     +    
Sbjct: 443 REFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521


>gi|301164314|emb|CBW23872.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 699

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
            + +  +L     N +  E +  +            TP   +L+N      ND   R +I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   ERED +     +           I  RYP+  +L    +   C 
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      ++Y +E +Q+ +++ TGGD L+ 
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+    P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E +     AI ++ +AG ++ +Q V     +    
Sbjct: 443 REFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521


>gi|53714863|ref|YP_100855.1| hypothetical protein BF3578 [Bacteroides fragilis YCH46]
 gi|52217728|dbj|BAD50321.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
          Length = 699

 Score =  172 bits (437), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
            + +  +L     N +  E +  +            TP   +L+N      ND   R +I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   ERED +     +           I  RYP+  +L    +   C 
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      ++Y +E +Q+ +++ TGGD L+ 
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+    P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E +     AI ++ +AG ++ +Q V     +    
Sbjct: 443 REFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521


>gi|265766723|ref|ZP_06094552.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263253100|gb|EEZ24576.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 699

 Score =  172 bits (436), Expect = 8e-41,   Method: Composition-based stats.
 Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
            + +  +L     N +  E +  +            TP   +L+N      ND   R +I
Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   ERED +     +           I  RYP+  +L    +   C 
Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      ++Y +E +Q+ +++ TGGD L+ 
Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L+ +  +                   +Q +R  SR+    P RIN ELI+ L
Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E +     AI ++ +AG ++ +Q V     +    
Sbjct: 443 REFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521


>gi|301310737|ref|ZP_07216676.1| KamA family protein [Bacteroides sp. 20_3]
 gi|300832311|gb|EFK62942.1| KamA family protein [Bacteroides sp. 20_3]
          Length = 704

 Score =  172 bits (436), Expect = 9e-41,   Method: Composition-based stats.
 Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%)

Query: 7   TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61
            + S  +L       +  E +  +           +TP   +L  I     +D   R +I
Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268

Query: 62  PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
               EL          E+ED +  +  +           I  RYP+  +L    +   C 
Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++       +   +  +      + Y +E +Q+ +++ TGGD L+ 
Sbjct: 329 GLCASCQRMYDFQSERLNFDFEVLKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +  L+K+L+ +  +                   +Q +R  SR+    P R+  EL+  L
Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448

Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E  +          YI  H   P E + EA  AI  +  AG  + +Q V     +    
Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRKGH 508

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302
             A L +T   L +  YY     +     ++ +      +++E ++    +  ++ 
Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559


>gi|154492755|ref|ZP_02032381.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC
           43184]
 gi|154087060|gb|EDN86105.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC
           43184]
          Length = 703

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 64/320 (20%), Positives = 113/320 (35%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI 61
              S  +L       +    +D +           +TP   +L+N +    +D   R +I
Sbjct: 208 AFKSPTELNYFLGGSLSAGTMDLLARARKKGMPFFVTPYYLSLLNTNTSGYDDATIRSYI 267

Query: 62  PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              EEL          E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 268 LYSEELVDTYGRIKAWEKEDIVVSGQPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 327

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      ++   +  +      + Y +E +Q+ +++ TGGD L+ 
Sbjct: 328 GLCASCQRMYDFQSERLNFDFESLKPKETWDKKLRRLMRYFEEDAQLRDILITGGDALMS 387

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +  L+ +L  +  +                   +Q +R  SR+    P RI  EL+  L
Sbjct: 388 QNATLRNILDAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRITDELVGIL 447

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +               I  H   P E + EA  AI  + +AG I+ +Q V     +    
Sbjct: 448 RSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAIEAILSAGWIITNQLVYTVAASRRGH 507

Query: 253 ILANLMRTFVELRIKPYYLH 272
             A L +T   + +  YY  
Sbjct: 508 T-AKLRQTLNAMGVVCYYTF 526


>gi|189467675|ref|ZP_03016460.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM
           17393]
 gi|189435939|gb|EDV04924.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM
           17393]
          Length = 697

 Score =  171 bits (433), Expect = 2e-40,   Method: Composition-based stats.
 Identities = 73/318 (22%), Positives = 118/318 (37%), Gaps = 55/318 (17%)

Query: 9   TSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI-- 61
            S  +L     N +  E +  +           +TP   +L+NP     ND   R +I  
Sbjct: 202 KSPTELNRFLGNSLSAETMYLLSRARKKGMPFFVTPYYLHLLNPGSTGYNDESLRSYILY 261

Query: 62  -PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCPVY 108
            PQ  E    I   ERED +     +           I  RYP+  +L    +   C   
Sbjct: 262 SPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACGGL 321

Query: 109 CRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLILSH 159
           C  C R     S     +  ++   +  E  L     Y +E +Q+ +++ TGGD L+  +
Sbjct: 322 CASCQRMYDFQSKRLNFEFDSLRPKETWEKKLRRLMTYFEEDTQLRDILITGGDALMSQN 381

Query: 160 KRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCLKE 202
           K L  +L+ +  +                   +Q +R  SR+P   P RIN EL++ L+ 
Sbjct: 382 KTLNTILEAIYRMAARKRKANQERPEGEKYAELQRIRLGSRLPAYLPMRINNELVEILRT 441

Query: 203 AG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
                     +   I  H   P E + EA   I +L +AG ++ +Q V     +      
Sbjct: 442 FKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGIRKLLSAGWLITNQLVYNVAASRRGHT- 500

Query: 255 ANLMRTFVELRIKPYYLH 272
             L +   EL +  YY  
Sbjct: 501 TRLRQVLNELGVVCYYTF 518


>gi|299148849|ref|ZP_07041911.1| KamA family protein [Bacteroides sp. 3_1_23]
 gi|298513610|gb|EFI37497.1| KamA family protein [Bacteroides sp. 3_1_23]
          Length = 713

 Score =  169 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 208 AIKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      ++   +  +      +AY +E +Q+ +++ TGGD L+ 
Sbjct: 328 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 387

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K LQ +L  +  +                   +Q +R  SR+    P RIN  L+  L
Sbjct: 388 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 447

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 448 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 508 T-TRLRQVLNSLGVVCYYTF 526


>gi|224538814|ref|ZP_03679353.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519571|gb|EEF88676.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 697

 Score =  169 bits (430), Expect = 4e-40,   Method: Composition-based stats.
 Identities = 73/318 (22%), Positives = 118/318 (37%), Gaps = 55/318 (17%)

Query: 9   TSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI-- 61
            S  +L     N +  E +  +           +TP   +L+NP     ND   R +I  
Sbjct: 202 KSPTELNRFLGNSLSAETMYLLSRARKKGMPFFVTPYYLHLLNPGSTGYNDESLRSYILY 261

Query: 62  -PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCPVY 108
            PQ  E    I   ERED +     +           I  RYP+  +L    +   C   
Sbjct: 262 SPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACGGL 321

Query: 109 CRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLILSH 159
           C  C R     S     +  ++   +  E  L     Y +E +Q+ +++ TGGD L+  +
Sbjct: 322 CASCQRMYDFQSKRLNFEFDSLRPKEIWEKKLRRLMTYFEEDTQLRDILITGGDALMSQN 381

Query: 160 KRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCLKE 202
           K L  +L+ +  +                   +Q +R  SR+P   P RIN EL++ L+ 
Sbjct: 382 KTLNTILEAVYRMAARKRKANQERPEGEKYAELQRIRLGSRLPAYLPMRINNELVEILRT 441

Query: 203 AG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254
                     +   I  H   P E + EA   I +L +AG ++ +Q V     +      
Sbjct: 442 FKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGIRKLLSAGWLITNQLVYNVAASRRGHT- 500

Query: 255 ANLMRTFVELRIKPYYLH 272
             L +   EL +  YY  
Sbjct: 501 TRLRQVLNELGVVCYYTF 518


>gi|167763257|ref|ZP_02435384.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC
           43183]
 gi|167698551|gb|EDS15130.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC
           43183]
          Length = 699

 Score =  169 bits (429), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 73/320 (22%), Positives = 117/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N      ND   R +I
Sbjct: 201 AVKSPTELNRFLGNSLSVETMYLLSRARKKGMPFFATPYYLSLLNCTGSGYNDDSLRSYI 260

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              PQ  E    I   ERED +     +           I  RYP+  +L    +   C 
Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320

Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S     +   +   +  +  L     Y +E +Q+ +++ TGGD L+ 
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFEELHPKESWDKKLRRLMTYFEEDTQLRDILITGGDALMS 380

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L+ +L  +  +                   +Q +R  SR+P   P RIN EL+  L
Sbjct: 381 QNKTLRNILDAVYRMAVRKRKANQERPEGEKYAELQRIRLGSRLPAYLPMRINDELVDIL 440

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          +   I  H   P E + EA   I +L +AG ++ +Q V     +    
Sbjct: 441 REFKEKASTVGIRQFIIQTHFQTPLEVTPEAEEGIRKLLSAGWLITNQLVYNVAASRRGH 500

Query: 253 ILANLMRTFVELRIKPYYLH 272
             A L +   +L I  YY  
Sbjct: 501 T-ARLRQVLNKLGIICYYTF 519


>gi|160887264|ref|ZP_02068267.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483]
 gi|156107675|gb|EDO09420.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483]
          Length = 711

 Score =  169 bits (428), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      ++   +  +      +AY +E +Q+ +++ TGGD L+ 
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 385

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K LQ +L  +  +                   +Q +R  SR+    P RIN  L+  L
Sbjct: 386 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 445

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524


>gi|260171420|ref|ZP_05757832.1| hypothetical protein BacD2_06100 [Bacteroides sp. D2]
          Length = 711

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      ++   +  +      +AY +E +Q+ +++ TGGD L+ 
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 385

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K LQ +L  +  +                   +Q +R  SR+    P RIN  L+  L
Sbjct: 386 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 445

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524


>gi|315919734|ref|ZP_07915974.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313693609|gb|EFS30444.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 713

 Score =  169 bits (428), Expect = 8e-40,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 208 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      ++   +  +      +AY +E +Q+ +++ TGGD L+ 
Sbjct: 328 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 387

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K LQ +L  +  +                   +Q +R  SR+    P RIN  L+  L
Sbjct: 388 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 447

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 448 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 508 T-TRLRQVLNSLGVVCYYTF 526


>gi|293369159|ref|ZP_06615753.1| KamA family protein [Bacteroides ovatus SD CMC 3f]
 gi|292635742|gb|EFF54240.1| KamA family protein [Bacteroides ovatus SD CMC 3f]
          Length = 711

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      ++   +  +      +AY +E +Q+ +++ TGGD L+ 
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 385

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K LQ +L  +  +                   +Q +R  SR+    P RIN  L+  L
Sbjct: 386 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 445

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524


>gi|237721600|ref|ZP_04552081.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229449396|gb|EEO55187.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 713

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 208 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      ++   +  +      +AY +E +Q+ +++ TGGD L+ 
Sbjct: 328 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 387

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K LQ +L  +  +                   +Q +R  SR+    P RIN  L+  L
Sbjct: 388 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 447

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 448 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 508 T-TRLRQVLNSLGVVCYYTF 526


>gi|270293625|ref|ZP_06199827.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270275092|gb|EFA20952.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 698

 Score =  168 bits (427), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 70/320 (21%), Positives = 116/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
            + S  +L     N +  E +  + +          TP   +L+N      +D   R +I
Sbjct: 201 AVKSPTELNRLLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTGSGYDDEALRSYI 260

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              PQ  E    I   ERED +     +           I  RYP+  +L    +   C 
Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320

Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S     +  T+   +  E      + Y +E +Q+ +++ TGGD L+ 
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRRLMDYFEEDTQLRDILITGGDALMS 380

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L  +L  +  +                   +Q +R  SR+P   P RIN  L++ L
Sbjct: 381 QNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQRVRLGSRLPAYLPMRINDGLVEIL 440

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          +   I  H   P E + EA   I +L  AG ++ +Q V     +    
Sbjct: 441 REFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +   +L +  YY  
Sbjct: 501 T-TRLRQVLNQLGVVCYYTF 519


>gi|160888851|ref|ZP_02069854.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492]
 gi|156861750|gb|EDO55181.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492]
          Length = 698

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 116/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
            + S  +L     N +  E +  + +          TP   +L+N      +D   R +I
Sbjct: 201 AVKSPTELNRLLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTGSGYDDEALRSYI 260

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              PQ  E    I   ERED +     +           I  RYP+  +L    +   C 
Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320

Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S     +  T+   +  E      +AY +E +Q+ +++ TGGD L+ 
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRRLMAYFEEDTQLRDILITGGDALMS 380

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L  +L  +  +                   +Q +R  SR+P   P RIN  L++ L
Sbjct: 381 QNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQRVRLGSRLPAYLPMRINDGLVEIL 440

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E              I  H   P E + EA   I +L  AG ++ +Q V     +    
Sbjct: 441 REFKEKASTIGIHQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +   +L +  YY  
Sbjct: 501 T-TRLRQVLNQLGVVCYYTF 519


>gi|317479408|ref|ZP_07938542.1| KamA family protein [Bacteroides sp. 4_1_36]
 gi|316904482|gb|EFV26302.1| KamA family protein [Bacteroides sp. 4_1_36]
          Length = 698

 Score =  167 bits (425), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 117/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61
            + S  +L     N +  E +  + +          TP   +L+N      +D   R +I
Sbjct: 201 AVKSPTELNRLLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTGSGYDDEALRSYI 260

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              PQ  E    I   ERED +     +           I  RYP+  +L    +   C 
Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320

Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S     +  T+   +  E      +AY +E +Q+ +++ TGGD L+ 
Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRRLMAYFEEDTQLRDILITGGDALMS 380

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L  +L  +  +                   +Q +R  SR+P   P RIN  L++ L
Sbjct: 381 QNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQRVRLGSRLPAYLPMRINDGLVEIL 440

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          +   I  H   P E + EA   I +L  AG ++ +Q V     +    
Sbjct: 441 REFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +   +L +  YY  
Sbjct: 501 T-TRLRQVLNQLGVVCYYTF 519


>gi|295087042|emb|CBK68565.1| L-lysine 2,3-aminomutase [Bacteroides xylanisolvens XB1A]
          Length = 713

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 118/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNITGYGYNDEAIRSYI 265

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      ++   +  +  L     Y +E +Q+ +++ TGGD L+ 
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K LQ +L  +  +                   +Q +R  SR+    P RIN  L+  L
Sbjct: 386 QNKTLQHILDAVYRMAVRKQKANLERPEGEKYAELQRVRLGSRLLAYLPMRINDGLVDIL 445

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524


>gi|328884100|emb|CCA57339.1| Lysine 2,3-aminomutase [Streptomyces venezuelae ATCC 10712]
          Length = 431

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 70/349 (20%), Positives = 121/349 (34%), Gaps = 54/349 (15%)

Query: 26  DEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQFIPQKEELNILPE----------- 72
            E + +       +T  +A+ L++    P+DP+ R  +P +  L                
Sbjct: 24  HEAEVVGQVLPFRVTSHVADELVDWTRAPDDPLYRLVMPHRGLLAPADFAAVERSLRDGD 83

Query: 73  ------------EREDPIGDNNHSPLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMV 118
                       ER DP          G+ HRYP+ +L+       C   C  C R    
Sbjct: 84  RDRLRLVVDGLRERLDPHPAGRD--AAGLRHRYPETLLVLPGQGRTCHGPCASCSRWPRF 141

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI---------------LSHKRLQ 163
                        EA    +    +I +V+F G  P                 L   RL 
Sbjct: 142 AGDPVRGRELGGPEALGDRLDRHPEITDVLFAGV-PFAGGSGADPPDPPDPFELRTARLA 200

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANH 215
             +  L     V+ +R  +R     P R            L++ +  +G+ + + ++  H
Sbjct: 201 PYVTALLDRPGVRTVRIVTRAVSRFPGRFLDAPDADDLLRLLERVVASGRHLVLTLYVCH 260

Query: 216 PYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274
           P E     A  A+ RLA  G +L ++  +L+ +NDD  + A + R    L + PY +   
Sbjct: 261 PRELRPATARRALGRLAATGAVLRTRGAVLRRVNDDAALWARMWREQTALGLAPYGMLVE 320

Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323
                   FRL +    ++ A    ++ GL        +P   G + +D
Sbjct: 321 RGGGVRRCFRLPLARVLEVHAEALRRVPGLAGRVCGPVMPTELGVLAVD 369


>gi|237715748|ref|ZP_04546229.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408756|ref|ZP_06085302.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294644787|ref|ZP_06722531.1| KamA family protein [Bacteroides ovatus SD CC 2a]
 gi|294806062|ref|ZP_06764919.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b]
 gi|229444457|gb|EEO50248.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262353621|gb|EEZ02715.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292639865|gb|EFF58139.1| KamA family protein [Bacteroides ovatus SD CC 2a]
 gi|294446730|gb|EFG15340.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 712

 Score =  166 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 118/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNITGYGYNDEAIRSYI 265

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      ++   +  +  L     Y +E +Q+ +++ TGGD L+ 
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K LQ +L  +  +                   +Q +R  SR+    P RIN  L+  L
Sbjct: 386 QNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQRVRLGSRLLAYLPMRINDGLVDIL 445

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524


>gi|298484432|ref|ZP_07002588.1| KamA family protein [Bacteroides sp. D22]
 gi|298269405|gb|EFI11010.1| KamA family protein [Bacteroides sp. D22]
          Length = 713

 Score =  166 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 71/320 (22%), Positives = 118/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  +            TP   +L+N   +  ND   R +I
Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNITGYGYNDEAIRSYI 265

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              P+  E   NI   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      ++   +  +  L     Y +E +Q+ +++ TGGD L+ 
Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K LQ +L  +  +                   +Q +R  SR+    P RIN  L+  L
Sbjct: 386 QNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQRVRLGSRLLAYLPMRINDGLVDIL 445

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          K   I  H   P E + EA  AI ++ +AG I+ +Q V     +    
Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524


>gi|313158793|gb|EFR58178.1| KamA family protein [Alistipes sp. HGB5]
          Length = 698

 Score =  165 bits (419), Expect = 8e-39,   Method: Composition-based stats.
 Identities = 66/320 (20%), Positives = 118/320 (36%), Gaps = 55/320 (17%)

Query: 7   TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61
            + S  +L     N +  E +  + +          TP   +L++       D   R +I
Sbjct: 202 AVKSPSELNRFLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLDVTGKGYGDEAIRSYI 261

Query: 62  ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106
              PQ  E   +I   E+ED +     +           I  RYP+  +L    +   C 
Sbjct: 262 LYSPQLVETYGSIRAWEKEDVVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 321

Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157
             C  C R     S++      ++   +  +      + Y +E +Q+ +++ TGGD L+ 
Sbjct: 322 GLCASCQRMYDFQSERLNFEFESLRPKESWDHKLRRLMTYFEEDTQLRDILITGGDALMS 381

Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200
            +K L  +L+ +  +                   +Q +R  SR+P   P RI+  L++ L
Sbjct: 382 QNKTLHNILEAVYRMACRKRKANAGRPDGEKYAELQRVRLGSRLPAYLPMRIDDGLVEVL 441

Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +E          +   I  H   P E + EA  AI R+  AG ++ +Q V     +    
Sbjct: 442 REFKQKASAVGVRQFIIQTHFQSPLEVTPEAQEAIRRILAAGWLVTNQLVYTVAASRRGH 501

Query: 253 ILANLMRTFVELRIKPYYLH 272
               L +    L +  YY  
Sbjct: 502 T-TRLRQVLNALGVVCYYTF 520


>gi|289665699|ref|ZP_06487280.1| Putative radical SAM superfamily protein [Xanthomonas campestris
           pv. vasculorum NCPPB702]
          Length = 123

 Score =  163 bits (413), Expect = 4e-38,   Method: Composition-based stats.
 Identities = 43/123 (34%), Positives = 65/123 (52%)

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           +++   PV   +HANH  EF     AA+  L +AG  LL+Q+VLL+G+ND  + LA L  
Sbjct: 1   MRQLPWPVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDALAALSE 60

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
                 + PYYLH  D  AG +HF +     + +   L  ++SG   P  + ++PG  GK
Sbjct: 61  RSFAAGVLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIPGDTGK 120

Query: 320 VKI 322
             +
Sbjct: 121 RPL 123


>gi|213024108|ref|ZP_03338555.1| hypothetical protein Salmonelentericaenterica_16976 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 105

 Score =  152 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 44/104 (42%), Positives = 62/104 (59%)

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           GDPL+     L  +L  L  IKHV+ LR HSR+PIV P RI  EL+    ++   + +  
Sbjct: 1   GDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVN 60

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
           H NH  E  E    A+ +L + G+ LL+QSVLL+G+ND+ + LA
Sbjct: 61  HINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLA 104


>gi|75764491|ref|ZP_00743973.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
 gi|74488018|gb|EAO51752.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis
           ATCC 35646]
          Length = 202

 Score =  152 bits (385), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 53/100 (53%)

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312
           I+  LM   V++R++PYY++  DL+ G  HFR  + +G +I+  L+   SG   P +++D
Sbjct: 9   IMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAVPTFVVD 68

Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352
            PGG GK+ +  + +         + +   ++  YP   S
Sbjct: 69  APGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 108


>gi|332975102|gb|EGK12007.1| lysine 2,3-aminomutase [Desmospora sp. 8437]
          Length = 189

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 7/145 (4%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72
           D+     I +E+ +++ +I+N +   L     +LI+ ++PNDPI +  IP + EL+    
Sbjct: 19  DIRKIQEIPEEKREKLTKITNKFVFRLNDYYLSLIDWNDPNDPIYKLIIPSEAELDE--Y 76

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
            + D   +  +  + G  H+Y    LL +  VC  YCRFCFR+ +   +     +S D  
Sbjct: 77  GKWDASDEYTNYVVPGCQHKYQTTALLIVSEVCGAYCRFCFRKRLF--RNDVHEASLDVA 134

Query: 133 AALAYIQEKSQIWEVIFTGG---DP 154
             + YI++  QI  V+ TGG   DP
Sbjct: 135 PGVEYIRKNPQINNVLLTGGRLPDP 159


>gi|332975101|gb|EGK12006.1| protein of hypothetical function DUF160 [Desmospora sp. 8437]
          Length = 187

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 8/139 (5%)

Query: 190 QRI--NPELIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
            RI  + EL+  L E       +++  H NHP E +++A  AI  L  AG+IL++Q+ +L
Sbjct: 1   MRIYEDKELLDTLSEYSLGDSRIHVMAHFNHPRELTDQAYRAIDALQRAGVILVNQTPVL 60

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
           KGINDDPEILA L+       + PYY       AG + F LT  E  +++   K + SGL
Sbjct: 61  KGINDDPEILAELLDKLSWAGVTPYYFFQNRPVAGNADFVLTFREAYEVIEQAKARTSGL 120

Query: 305 CQP-FYILDLPGGYGKVKI 322
            +   Y   +    GK++I
Sbjct: 121 GKRIRYA--MSHSTGKIEI 137


>gi|167944999|ref|ZP_02532073.1| KamA family protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 107

 Score =  146 bits (369), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 36/106 (33%), Positives = 52/106 (49%)

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
            E S      + +L+  GI LL+QSVLL+G+ND  E LA L     +  + PYYLH  D 
Sbjct: 1   REISAAVADGLQQLSEQGIRLLNQSVLLRGVNDSAETLAELSEQLFDAGVMPYYLHLLDR 60

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
             G +HF L   + Q+I  +L   + G   P  + +  G   K  +
Sbjct: 61  VDGAAHFELPAAKSQQIYQALLAALPGYLVPKLVREEVGAPSKTPV 106


>gi|226327320|ref|ZP_03802838.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198]
 gi|225204538|gb|EEG86892.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198]
          Length = 153

 Score =  139 bits (351), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 64/136 (47%), Gaps = 4/136 (2%)

Query: 6   KTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64
           + ++   +L     ++  E++ +  +    + + +       +   +PNDP+  Q +   
Sbjct: 21  QAISDPVELLQLLALEHHEELQKGAQARRLFPLRVPREFVARMKKGDPNDPLLLQVLTAN 80

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            E  I P    DP+ +  ++ + G++H+Y +R LL +   C V CR+CFRR      +  
Sbjct: 81  AEFTITPGFSTDPLDEQQNA-VPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPY--EDN 137

Query: 125 VLSSKDTEAALAYIQE 140
             +  + + A+ YI++
Sbjct: 138 KGNKANWQKAIEYIKK 153


>gi|270669603|ref|ZP_06222610.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212]
 gi|270316555|gb|EFA28395.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212]
          Length = 105

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 34/101 (33%), Positives = 50/101 (49%)

Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279
            +    A+ +L    + LL+QSVLL+ +NDD +IL  L     +  I PYYLH  D   G
Sbjct: 1   DQIFTNAMQKLNAVNVTLLNQSVLLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQG 60

Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
            SHF ++  E  +I  +L+   SG   P    ++ G   K 
Sbjct: 61  ASHFLISDIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 101


>gi|10198121|gb|AAG15195.1|AF286047_3 unknown [Chlorobaculum tepidum]
          Length = 276

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 37/176 (21%)

Query: 33  NHYSIALTPVIA-NLINPHN-PNDPIARQFIPQKEELNILPEER--------EDP--IGD 80
             Y   +   +A NLI+  N P+DP+ R   PQ   L+               DP  I +
Sbjct: 46  EVYPFRVNSHVAENLIDWSNIPDDPMFRLTFPQAGMLSADDYTMLSGLVASNADPSIIRE 105

Query: 81  N-----------------------NHSPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRR 115
                                   +  P  G+ H+Y + +L   L   VC  YC +CFR 
Sbjct: 106 EARKIQLRQNPNPAGQMELNTPWLDDEPFHGMQHKYRESVLFFPLEAQVCHAYCTYCFRW 165

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
                 +    ++   E  + Y+++  ++ +VIFTGGDP+++S   ++K+  T  +
Sbjct: 166 PQFSGVENLKFANDSIERLVEYLEQHPEVKDVIFTGGDPMVMSTMLIKKIHATAAW 221


>gi|58426923|gb|AAW75960.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
           KACC10331]
          Length = 237

 Score =  112 bits (282), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 52/134 (38%), Gaps = 3/134 (2%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q + +  +   + L     +  +        +  + + +       +   + +DP+ RQ
Sbjct: 22  WQQQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119
            +P   E+  +P    D +GD       G++ +Y  R LL     C V+CR+CFRR    
Sbjct: 82  VLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141

Query: 120 SQKGTVLSSKDTEA 133
           +++    +      
Sbjct: 142 AEE--TAARDGWRE 153


>gi|213859667|ref|ZP_03385371.1| hypothetical protein SentesT_25317 [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 81

 Score =  106 bits (266), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
            ++E  I P    DP+ +  HS + G++H+Y +R LL +   C V CR+CFRR    ++ 
Sbjct: 1   SQDEFVIAPGFSTDPL-EEQHSVVSGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAEN 59

Query: 123 GTVLSSKDTEAALAYIQEKSQIWE 146
               + ++ + AL Y+    ++ E
Sbjct: 60  QG--NKRNWQTALEYVAAHPELDE 81


>gi|325918736|ref|ZP_08180828.1| hypothetical protein XVE_4859 [Xanthomonas vesicatoria ATCC 35937]
 gi|325535030|gb|EGD06934.1| hypothetical protein XVE_4859 [Xanthomonas vesicatoria ATCC 35937]
          Length = 130

 Score = 88.2 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 1/109 (0%)

Query: 1   MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59
            Q + +  +   + L     +  +      E +  + + +       +   + +DP+ RQ
Sbjct: 22  WQQQWRDAVRDPRVLLELLGLDAQAAGISAEAAAQFPLRVPQAFVARMRHGDLHDPLLRQ 81

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
            +P   E+  +P    D +GD       G++ +Y  R LL     C V+
Sbjct: 82  VLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVH 130


>gi|227357433|ref|ZP_03841787.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
 gi|227162391|gb|EEI47391.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906]
          Length = 63

 Score = 87.1 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 28/58 (48%)

Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
            PYYLH  D   G +HF +   E ++I+ SL   +SG   P    ++ G   K  +D 
Sbjct: 1   MPYYLHVLDKVQGAAHFMVPDSEAREIMKSLMSLVSGYMVPKLTREIGGEPSKTLLDL 58


>gi|154308719|ref|XP_001553695.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10]
 gi|150852733|gb|EDN27925.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10]
          Length = 309

 Score = 85.2 bits (210), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 5/88 (5%)

Query: 18  NLIKKEQ-IDEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIPQKE-ELNILPE 72
            ++ +E  I+++KE      +++   P + ++I+  NP  DPI RQFIP K  +L   P+
Sbjct: 211 GIVTREDFIEDVKEGIKLAPMSIRLPPHVLSIIDWENPFEDPIRRQFIPMKSSKLEDHPK 270

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLK 100
              D + +++ SP++G VHRY D+ L  
Sbjct: 271 VELDSLHESDDSPVEGFVHRYYDKALFL 298


>gi|163784746|ref|ZP_02179552.1| Lysine 2,3-aminomutase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159879987|gb|EDP73685.1| Lysine 2,3-aminomutase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 115

 Score = 80.5 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 3/88 (3%)

Query: 1   MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60
            Q+ ++ LT+ +++     + KE      + +  +    TP   +LI   + ++PI +Q 
Sbjct: 28  WQIANR-LTTLEEIKKIFPVSKELETAFLKTTEIFHFGTTPYYLSLIKEFSYDNPIFKQV 86

Query: 61  IPQKEELN--ILPEEREDPIGDNNHSPL 86
            P  +E++        EDP  ++  SP+
Sbjct: 87  FPSLDEIDKEKQKYSYEDPFLEDTLSPV 114


>gi|213418029|ref|ZP_03351106.1| KamA family protein [Salmonella enterica subsp. enterica serovar
           Typhi str. E01-6750]
          Length = 67

 Score = 80.2 bits (197), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102
               +   NP+DP+ RQ +  ++E  + P    DP+ +  HS + G++H+Y +R LL + 
Sbjct: 9   FIARMEKGNPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVK 67


>gi|255281034|ref|ZP_05345589.1| PDZ domain protein [Bryantella formatexigens DSM 14469]
 gi|255268482|gb|EET61687.1| PDZ domain protein [Bryantella formatexigens DSM 14469]
          Length = 456

 Score = 76.3 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 41/184 (22%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
            H C   C FCF  +M    + T+           Y ++      + F  G+ + L++  
Sbjct: 88  YHSCRNRCIFCFIDQMPPGMRKTL-----------YFKDDD--TRLSFLQGNYVTLTN-- 132

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFS 220
                  +  +   QILR+H     +  Q +NP+L  + L                  F+
Sbjct: 133 -------IGEMDMEQILRYHLSPINISFQTMNPQLRCKMLG---------------NRFA 170

Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280
            EA+  + RLA AGI +  Q VL KG+ND  E+  ++ +     R  PY      +  G 
Sbjct: 171 GEALKKVDRLAEAGIEMNGQIVLCKGVNDGEELEYSIRQL---TRYLPYLRSVSVVPVGL 227

Query: 281 SHFR 284
           + FR
Sbjct: 228 TRFR 231


>gi|262189696|ref|ZP_06048065.1| lysine 2,3-aminomutase [Vibrio cholerae CT 5369-93]
 gi|262034425|gb|EEY52796.1| lysine 2,3-aminomutase [Vibrio cholerae CT 5369-93]
          Length = 51

 Score = 69.0 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 27/48 (56%)

Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325
            G +HF ++ ++ ++I+A L E++SG   P    ++ G   K  +D H
Sbjct: 2   QGAAHFYVSDDKARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 49


>gi|167947613|ref|ZP_02534687.1| hypothetical protein Epers_14147 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 119

 Score = 68.2 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 2/105 (1%)

Query: 7   TLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65
             T  Q L+    +          + +  + + +    A L+   +P DP+ RQ +P  +
Sbjct: 4   AFTHPQALFEFLQLDPGPAAWRALQAATTFPLRVPLGYAALMRKGDPADPLLRQVLPLAQ 63

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDR-ILLKLLHVCPVYC 109
           EL        +P+GD+            P    + +   +CP  C
Sbjct: 64  ELQDQAGFDTNPVGDSAGRGTARSAAEVPGTSAIDRHWRLCPFNC 108


>gi|169626132|ref|XP_001806468.1| hypothetical protein SNOG_16345 [Phaeosphaeria nodorum SN15]
 gi|111055211|gb|EAT76331.1| hypothetical protein SNOG_16345 [Phaeosphaeria nodorum SN15]
          Length = 243

 Score = 67.8 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 3/96 (3%)

Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP-DLAAGTSHF 283
           AAI  L   G+ + + + LL G+ +    +  L+     + I PY  H     A      
Sbjct: 75  AAIDHLFQHGVTVPNLTRLLSGVEEQASDMRELINKLSGIHIVPY--HVCLHEACEGEDL 132

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319
            + +    ++   ++  I     P  + DLP G GK
Sbjct: 133 CVPLSVALQLEKEIRGPILDYQMPKLVADLPNGGGK 168


>gi|88800258|ref|ZP_01115825.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297]
 gi|88776973|gb|EAR08181.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297]
          Length = 322

 Score = 67.4 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 21/178 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  VC   C +C      G      LS+ + EAA+    +     ++  TGG+P + S
Sbjct: 15  LSVTDVCNFRCSYCLPDGYQGKPDEAFLSASELEAAVRGFAQMGT-QKIRLTGGEPGLRS 73

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIV----DPQRINPELIQCLKEAGKPV-YIAIHA 213
              L +++  L  I  +  +              PQRI       L      +  +    
Sbjct: 74  D--LPEIIYRLNRIDGINNI-----AVTTNGYKLPQRIQHWADAGLNHLNVSIDSLDSST 126

Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD-PEILANLMRTFVELR 265
            H  E +      E +  +++    G+ +   +VL+KG+NDD   +L  L +T V LR
Sbjct: 127 FH--EITGHDRLAEVLEGLAKARELGLTVKVNAVLMKGVNDDLAAVLTWLKQTPVTLR 182


>gi|283797873|ref|ZP_06347026.1| PDZ domain protein [Clostridium sp. M62/1]
 gi|291074564|gb|EFE11928.1| PDZ domain protein [Clostridium sp. M62/1]
          Length = 465

 Score = 67.1 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 49/206 (23%), Positives = 76/206 (36%), Gaps = 50/206 (24%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       +  T      +
Sbjct: 82  LMSEYRSCHNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 131

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
             K  +            +I+RFH     +  Q +NP+L  + L                
Sbjct: 132 KDKDFE------------RIIRFHLAPINISVQTMNPKLRCRMLN--------------- 164

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             F+ EA+  I RL  AGI +  Q VL KG+ND  E+  ++       R  PY      +
Sbjct: 165 NRFAGEALKKIDRLYEAGIPMNGQIVLCKGVNDGRELDFSIREL---TRYIPYMQSVSVV 221

Query: 277 AAGTSHFR---------LTIEEGQKI 293
             G S +R            E GQ I
Sbjct: 222 PVGLSRYREGLYPLEPFTPEECGQAI 247


>gi|229004622|ref|ZP_04162360.1| Lysine 2,3-aminomutase protein [Bacillus mycoides Rock1-4]
 gi|228756663|gb|EEM05970.1| Lysine 2,3-aminomutase protein [Bacillus mycoides Rock1-4]
          Length = 177

 Score = 65.5 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 38/138 (27%)

Query: 6   KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQ 63
            T ++ +++   N I    + EI+ I +     +      NLI+  N PNDP+ +   P 
Sbjct: 14  YTTSNFKNIPQLNEISPHLMKEIEVIGSVLPFKVNSYYLNNLIDWGNVPNDPMFQLVFPN 73

Query: 64  KEE-------------------------------LNILPEERED---PIGDNNHSPLKGI 89
           ++                                LN  P  + +   PI + N   LKGI
Sbjct: 74  RKMIEEEDYIKLESSIDTGDKALKKELVENIIKKLNPHPGGQMELNVPIVEENA--LKGI 131

Query: 90  VHRYPDRILLKLLHVCPV 107
            H+Y + +L     V PV
Sbjct: 132 QHKYNETVLFFQKKVKPV 149


>gi|15607116|ref|NP_214498.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5]
 gi|7674126|sp|O67929|MOAA_AQUAE RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|2984358|gb|AAC07877.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5]
          Length = 320

 Score = 64.0 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 30/189 (15%)

Query: 94  PDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQ--EKSQIWEV 147
           P ++L + L   C + C FC    M   ++   L  +     E    Y++   K  + +V
Sbjct: 9   PLKVLRISLTDRCNLRCNFC----MPPGKEYNFLPKRQLLTPEEIEEYVKIFAKLGVEKV 64

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KP 206
             TGG+PL+     L+++++ +  ++ ++ +   +   +   +R     ++ LKEAG K 
Sbjct: 65  RLTGGEPLLRED--LEEIIQRISKVEGIKDIALTTNG-VFLKER-----LKALKEAGLKR 116

Query: 207 VYIAIHANHP--------YEFS-EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
           + +++H+ +P           +  E    I R    G  +   SV++KG NDD   + +L
Sbjct: 117 ITVSVHSLNPEKNQKLVNRSVNLGEVFEVIIRAKELGFKVKVNSVIIKGFNDD--EILDL 174

Query: 258 MRTFVELRI 266
            R F  L +
Sbjct: 175 ARFFKNLGV 183


>gi|157694065|ref|YP_001488527.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus
           SAFR-032]
 gi|157682823|gb|ABV63967.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus
           SAFR-032]
          Length = 335

 Score = 63.6 bits (154), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 37/192 (19%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKD 130
           D I D  H PL+ +         + +   C   C +C   E+ G       K  +LS ++
Sbjct: 2   DSILDKRHRPLRDLR--------ISVTDRCNFRCTYCMPAEIFGPDYPFLNKEELLSFEE 53

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIV 187
            E       +   + ++  TGG+PL+     L  +++ L  I  ++ +      + +P+ 
Sbjct: 54  IEQLATLFAKDLGVVKIRITGGEPLLRKD--LPILIEKLSNIPGIEDIAMTTNGTLLPVY 111

Query: 188 DPQRINPELIQCLKEAGKP-VYIAIHANHPYEFS---------EEAIAAISRLANAGIIL 237
                       LK+AG   V I++ + +P  F          ++    I     AG+ +
Sbjct: 112 ---------ADKLKKAGLQRVTISLDSLNPDRFKQMNGRNISIQKVFDGIEAAKKAGLAI 162

Query: 238 LSQSVLLKGIND 249
               V+ KG+ND
Sbjct: 163 KINMVVQKGVND 174


>gi|295110182|emb|CBL24135.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus
           obeum A2-162]
          Length = 460

 Score = 61.3 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 38/163 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C  +C FCF  +M    + T+           Y ++      + F  G+ + L
Sbjct: 83  LMDDYRSCSNHCMFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYVTL 129

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           ++   + +          +++++H     V  Q +NP+L  + L           H    
Sbjct: 130 TNMSQEDI---------ERVIKYHLSPINVSFQAMNPKLRCKML-----------H---- 165

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
             F+ +A+  + RL  AGI +  Q VL KG+ND  E+  +L  
Sbjct: 166 NRFAGDALKKVDRLYEAGITMNGQIVLCKGVNDGEELEYSLRE 208


>gi|332702939|ref|ZP_08423027.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332553088|gb|EGJ50132.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 345

 Score = 60.5 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 28/166 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C + C +CF +++      ++L  ++    +  + ++  I +V  TGG+P +  
Sbjct: 26  LSVTDRCNLRCAYCFSKDIRFIDHQSILRYEELLTIVD-LAKELGIRKVRLTGGEPFVRK 84

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN---- 214
                 +++ +        LR  +         +    ++ LKE G       H N    
Sbjct: 85  D--FLWLVEHILARHPELDLRITTNA------TLLAGKVRTLKELG-----VTHLNVSLD 131

Query: 215 ----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                        +F  +  +A+  +   GI L   +V ++G+NDD
Sbjct: 132 TLDPRKFVDITGRDFFRQVRSALDEVMAEGIKLKVNAVAMRGVNDD 177


>gi|66576257|gb|AAY51688.1| MiaB-like tRNA modifying enzyme [Chlorobium tepidum TLS]
          Length = 446

 Score = 60.1 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 48/229 (20%), Positives = 81/229 (35%), Gaps = 50/229 (21%)

Query: 17  ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN----PND--PIARQFIPQKEELNIL 70
              +  ++I +IK +S  + +  T      I  ++    PND  P+ +   P  + +   
Sbjct: 81  YAQLDPKRIADIKGVS--FVLGTTDKFE--IAWYDGESLPNDSEPLVK-VSPVDKAITAH 135

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF------RREMVGSQKGT 124
           P        +               R  LK+   C   C +C       R   V      
Sbjct: 136 PACSMLSQPEKG-----------RTRAFLKIQDGCSFGCAYCSIPLARGRSRSVSLSTVL 184

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
             + K  +A            E++ TG   GD       RL  +L+ L  I  V  +R  
Sbjct: 185 DRAQKIADAGY---------REIVLTGINIGD-YQDGDTRLSGLLRRLETID-VSRIRIS 233

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISR 229
           S    V+PQ ++ ELI  +  +GK   I  H + P +   + +  A+ R
Sbjct: 234 S----VEPQLLDDELIDIVAASGK---IMPHFHLPLQSGSDTVLRAMRR 275


>gi|153812951|ref|ZP_01965619.1| hypothetical protein RUMOBE_03358 [Ruminococcus obeum ATCC 29174]
 gi|149830898|gb|EDM85988.1| hypothetical protein RUMOBE_03358 [Ruminococcus obeum ATCC 29174]
          Length = 468

 Score = 59.7 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 67/163 (41%), Gaps = 38/163 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C  +C FCF  +M    + T+           Y ++      + F  G+ + L
Sbjct: 91  LMDDYRSCSNHCMFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYVTL 137

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           ++   + +          +++++H     V  Q +NP+L  + L           H    
Sbjct: 138 TNMSQEDI---------ERVIKYHLSPINVSFQAMNPQLRCKML-----------H---- 173

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
             F+ +A+  + +L  AGI +  Q VL KG+ND  E+  +L +
Sbjct: 174 NRFAGDALKKVDQLYEAGITMNGQIVLCKGVNDGEELEYSLQK 216


>gi|225570487|ref|ZP_03779512.1| hypothetical protein CLOHYLEM_06588 [Clostridium hylemonae DSM
           15053]
 gi|225160684|gb|EEG73303.1| hypothetical protein CLOHYLEM_06588 [Clostridium hylemonae DSM
           15053]
          Length = 435

 Score = 59.7 bits (144), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 41/188 (21%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M G  + T+    D ++ L+++Q       +  T      +
Sbjct: 82  LMDEYRSCRNKCMFCFIDQMPGGMRDTLYFKDD-DSRLSFLQGN----YITLT-----NM 131

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           S   ++            +I+ +H     +     NPEL  + L           H    
Sbjct: 132 SDHDIE------------RIVTYHLEPINISFHTTNPELRCKML-----------H---- 164

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             F+ +A+  + RL   GI +  Q VL KGIND  E+  ++       R  PY      +
Sbjct: 165 NRFAGDALRKVDRLYEGGITMNGQIVLCKGINDGEELERSIRD---MSRYLPYLQSVSVV 221

Query: 277 AAGTSHFR 284
             G + +R
Sbjct: 222 PVGLTKYR 229


>gi|163785257|ref|ZP_02179923.1| lysine 2,3-aminomutase related protein [Hydrogenivirga sp.
          128-5-R1-1]
 gi|159879475|gb|EDP73313.1| lysine 2,3-aminomutase related protein [Hydrogenivirga sp.
          128-5-R1-1]
          Length = 105

 Score = 59.0 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 1  MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIA 57
          M+ +  T  S +D+      + ++QI +I+ +S  +   +   +   LIN  NP  DPI 
Sbjct: 1  MRYKTYTAKSFKDIPQVKKYLTEQQIFDIEVVSRVFPFKVNNYVIEKLINWGNPLEDPIF 60

Query: 58 RQFIPQKEELNILPEER 74
          R   PQ+  L      +
Sbjct: 61 RLTFPQRGMLQDEDYYK 77


>gi|253578392|ref|ZP_04855664.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850710|gb|EES78668.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 460

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 38/161 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C  +C FCF  +M    + T+    D ++ L+++Q       V  T      +
Sbjct: 83  LMDEYRSCSNHCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 132

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           S   L             +I++FH     V  Q +NP+L  + L           H    
Sbjct: 133 SDYDLD------------RIIKFHLSPINVSFQTMNPKLRCKML-----------H---- 165

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
             F+ +A+A + RL    + +  Q VL KGIND  E+  +L
Sbjct: 166 NRFAGDALAKVDRLYKGDVTMNGQIVLCKGINDRDELEYSL 206


>gi|94985862|ref|YP_605226.1| molybdenum cofactor biosynthesis protein A [Deinococcus
           geothermalis DSM 11300]
 gi|94556143|gb|ABF46057.1| Molybdenum cofactor biosynthesis protein A [Deinococcus
           geothermalis DSM 11300]
          Length = 333

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 72/183 (39%), Gaps = 32/183 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C + C +C   E+ G       +  +L+ ++ E           + ++  TGG+
Sbjct: 15  ISVTDRCNLRCTYCMPAEVFGPDYAFLPRTELLTFEEIERLARAF-VDLGVRKLRLTGGE 73

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC-LKE---------- 202
           PL+     L +++  L  I  V+ +   +   +  P R+  +L +  LK           
Sbjct: 74  PLLRRD--LPELVARLGRIAGVEDIALTTNGLL-LP-RLAADLQRAGLKRVTVSLDSLDP 129

Query: 203 --AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
              G+   + +H   P    +   AA+     AG+ +   +V+ +G+ND  E L  L   
Sbjct: 130 EVFGRMNGLNVH---PQRVLDGIEAALQ----AGLSVKVNTVVQRGVND--EGLRELWLA 180

Query: 261 FVE 263
             E
Sbjct: 181 LRE 183


>gi|291546331|emb|CBL19439.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus sp.
           SR1/5]
          Length = 462

 Score = 58.6 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 38/161 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+           Y ++      + F  G+ + L
Sbjct: 85  LMDDYRSCSNKCMFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYVTL 131

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           ++   + +          +++R+H     +  Q +NPEL  + L           H    
Sbjct: 132 TNMSEKDI---------ERVIRYHLEPINISFQAMNPELRCKML-----------H---- 167

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
             F+ +A+  +  L NAGI +  Q VL KG+ND  E+  +L
Sbjct: 168 NRFAGKALDKVDMLYNAGITMNGQIVLCKGVNDGDELEYSL 208


>gi|254302942|ref|ZP_04970300.1| 2-methylthioadenine synthetase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148323134|gb|EDK88384.1| 2-methylthioadenine synthetase [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 435

 Score = 57.0 bits (137), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
            R  +K+   C  +C +C         K      ++    +  + E     EVI  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202

Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                        + +L+ +  IK+++ +R  S    V P +I    I+  K   K +  
Sbjct: 203 SAYGEDFKEKDNFESLLEEILKIKNLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275


>gi|291519254|emb|CBK74475.1| RNA modification enzyme, MiaB family [Butyrivibrio fibrisolvens
           16/4]
          Length = 382

 Score = 56.7 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  +C +C     +       + S+D E  +  +     +   EV+ TG
Sbjct: 88  HTRAFVKVQDGCNQFCSYC-----IIPFARGRIRSRDIEDVVEEVTGLATNGYKEVVITG 142

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                    +   L  +L+ +  I  V+ +R  S    ++PQ +  E  + +    K   
Sbjct: 143 IHLSSYGNGTDYNLADLLEAIEKIDGVERIRLGS----LEPQIVTEEFAKRVSALSK--- 195

Query: 209 IAIHA 213
           +  H 
Sbjct: 196 MCPHF 200


>gi|256845484|ref|ZP_05550942.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp.
           3_1_36A2]
 gi|256719043|gb|EEU32598.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp.
           3_1_36A2]
          Length = 435

 Score = 55.9 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
            R  +K+   C  +C +C         K      ++    +  + E     EVI  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202

Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                        + +L+ +  IK ++ +R  S    V P +I    I+  K   K +  
Sbjct: 203 SAYGKDFKEKDNFESLLEEILKIKDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275


>gi|237742211|ref|ZP_04572692.1| Fe-S oxidoreductase [Fusobacterium sp. 4_1_13]
 gi|229429859|gb|EEO40071.1| Fe-S oxidoreductase [Fusobacterium sp. 4_1_13]
          Length = 435

 Score = 55.9 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
            R  +K+   C  +C +C         K      ++    +  + E     EVI  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202

Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                        + +L+ +  IK ++ +R  S    V P +I    I+  K   K +  
Sbjct: 203 SAYGKDFKEKDNFESLLEEILKIKDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275


>gi|14520767|ref|NP_126242.1| molybdenum cofactor biosynthesis protein a related [Pyrococcus
           abyssi GE5]
 gi|5457983|emb|CAB49473.1| mooA-like molybdenum cofactor biosynthesis protein A related
           [Pyrococcus abyssi GE5]
          Length = 419

 Score = 55.5 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 37/186 (19%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKS 142
           G++ R  + I ++    C + C FC   E   S+   +    D +  L +      ++  
Sbjct: 108 GLIDRGTNLIQVRGSTGCNMRCIFCSVDEGPYSRTRKLDFVVDIDYLLKWFDWVAKEKGK 167

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            +   +   G+PL+     + ++++ LR   HV ++   S   +     +N +L++ L E
Sbjct: 168 GLEAHLDAQGEPLLYP--FIVELVQALREHPHVSVISMQSNGVL-----LNDKLVEELAE 220

Query: 203 AGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           AG   V ++IH                  NH  E +E        L NAGI +L   V++
Sbjct: 221 AGLDRVNLSIHSLDPEKAKMLMGIKDYDLNHVLEMAEA-------LVNAGIDVLIAPVIM 273

Query: 245 KGINDD 250
            G+NDD
Sbjct: 274 FGVNDD 279


>gi|255523321|ref|ZP_05390291.1| molybdenum cofactor biosynthesis protein A [Clostridium
           carboxidivorans P7]
 gi|255512975|gb|EET89245.1| molybdenum cofactor biosynthesis protein A [Clostridium
           carboxidivorans P7]
          Length = 318

 Score = 55.1 bits (132), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 70/164 (42%), Gaps = 23/164 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDPLI 156
           + L   C + C +C   + V  +    V+  ++    +         I ++ +TGG+PLI
Sbjct: 14  ISLTDRCNLRCIYCMPEQGVSKKCHEDVIRFEEVLKIIK--SAVPLGIKKIRYTGGEPLI 71

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           L +  +  ++     I+ ++ +   +   ++       +L   LKEAG    + I  +  
Sbjct: 72  LKN--ISSLISETSKIQQIKDIAITTNGILLY------DLADELKEAGLK-RVNISLDTL 122

Query: 217 YE-----FS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
            E      +      + + AI +  + GI +   +VL+KGINDD
Sbjct: 123 KEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDD 166


>gi|262376486|ref|ZP_06069715.1| molybdenum cofactor biosynthesis protein A [Acinetobacter lwoffii
           SH145]
 gi|262308625|gb|EEY89759.1| molybdenum cofactor biosynthesis protein A [Acinetobacter lwoffii
           SH145]
          Length = 341

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 65/160 (40%), Gaps = 15/160 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C         K  +LS +   A   ++     I ++  TGG+PL+  
Sbjct: 26  ISVTDRCNFKCSYCMPEHPQWMNKKDLLSFEALYAFCEFMVRH-GIEQIRVTGGEPLM-- 82

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPY 217
            + +   +  L+ +K + + R      +        +  Q LK AG   + I++ +  P 
Sbjct: 83  RQGIIHFIARLQTLKAIGLKRIS----MTSNGHYLADYAQPLKRAGLDDLNISLDSLDPK 138

Query: 218 EFSEEAIAAIS-------RLANAGIILLSQSVLLKGINDD 250
           +F +     +            AG+ +   SVL+KGIND+
Sbjct: 139 QFQQLTQKQLQPVLQGISAAQQAGLTVKINSVLIKGINDN 178


>gi|294785210|ref|ZP_06750498.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_27]
 gi|294486924|gb|EFG34286.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_27]
          Length = 435

 Score = 54.7 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
            R  +K+   C  +C +C         K      ++    +  + E     EVI  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202

Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                        + +L+ +  IK ++ +R  S    V P +I    I+  K   K +  
Sbjct: 203 SAYGKDFKEKDNFESLLEDILKIKDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275


>gi|317497456|ref|ZP_07955776.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|316895242|gb|EFV17404.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 440

 Score = 54.3 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 15/136 (11%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           E  D   D  +  L     +   R  +K+   C  +C +C      G  +   +  ++  
Sbjct: 128 EVIDIAHDQEYESLHVEQLKEHTRAYIKVQDGCNQFCSYCIIPYARGRVRSRKM--EEVL 185

Query: 133 AALAYIQEKSQ----IWEVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             +  + +       I  +  T  G D   L    L  +L+ +  I  V+ +R  S    
Sbjct: 186 EEITNLTKHGCQEFVITGIHVTSYGKD---LGDVTLTDLLEEIAKIPEVKRIRLGS---- 238

Query: 187 VDPQRINPELIQCLKE 202
           ++P  I  + +  L +
Sbjct: 239 LEPGFITKDTLDRLSK 254


>gi|222100438|ref|YP_002535006.1| hypothetical protein CTN_1464 [Thermotoga neapolitana DSM 4359]
 gi|221572828|gb|ACM23640.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359]
          Length = 319

 Score = 54.0 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 49/232 (21%), Positives = 85/232 (36%), Gaps = 32/232 (13%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI- 156
           +      C   C FC + +  G  K  V S  D    +    + S+ +E+ F GG     
Sbjct: 6   VFLPYAGCRKRCVFCDQVKATGQVK--VPSLDDIAQLIEEYSKTSKEYELGFYGG-TFTG 62

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           LS +++++ L  +R    V+ +R  +R     P  +  E ++ LK+           +  
Sbjct: 63  LSEQKMEEYLSFVRRFPVVKSIRISTR-----PDEVTVEKLEILKKYDVETIEVGVQSFS 117

Query: 217 YEF---------SEEAIAAISRLANAGIILLSQSV-LLKGI---NDDPEILANLMRTFVE 263
            E          S+EA  A   +   G  L   SV L+ G+   + + EIL+ L      
Sbjct: 118 DEVLEASKRGYTSDEAEKACKLIKKMGFRL---SVHLMVGLPKSSREGEILSALRTIECG 174

Query: 264 L---RIKPYYLH----HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
               RI P  +        +   + +  L +EE   I + L   + G     
Sbjct: 175 ADLVRIHPTLVFEGTELHRMMEASQYSPLDLEEAIDICSDLVCILEGWGVRV 226


>gi|291559329|emb|CBL38129.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium
           SSC/2]
          Length = 440

 Score = 54.0 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 15/136 (11%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           E  D   D  +  L     +   R  +K+   C  +C +C      G  +   +  ++  
Sbjct: 128 EVIDIAHDQEYESLHVEQLKEHTRAYIKVQDGCNQFCSYCIIPYARGRVRSRKM--EEVL 185

Query: 133 AALAYIQEKSQ----IWEVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             +  + +       I  +  T  G D   L    L  +L+ +  I  V+ +R  S    
Sbjct: 186 EEITNLTKHGCQEFVITGIHVTSYGKD---LGDVTLIDLLEEIAKIPEVKRIRLGS---- 238

Query: 187 VDPQRINPELIQCLKE 202
           ++P  I  + +  L +
Sbjct: 239 LEPGFITKDTLDRLSK 254


>gi|315425435|dbj|BAJ47099.1| molybdenum cofactor biosynthesis protein A [Candidatus
           Caldiarchaeum subterraneum]
          Length = 347

 Score = 54.0 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 94/253 (37%), Gaps = 36/253 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C   C FC     V      +L+ ++    +  I     + +V  +GG+PL+  
Sbjct: 33  LSVTDRCNFRCDFCMPLHPVWIPHKEILTYEEMARVIR-ILVGMNVTKVRLSGGEPLMRR 91

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPY 217
              L+K +K +  I  V+ +   +            E    LKEAG   V +++H+  P 
Sbjct: 92  D--LEKGVKLISSIPGVETISMTTNG------YFLEEKAAQLKEAGLQSVTVSLHSLKPE 143

Query: 218 EFSEEAIAA---------ISRLANAGI-ILLSQSVLLKGINDDPEI-LANL-MRTFVELR 265
            F +              +      G+  +    V+ +G NDD  +    L  ++   +R
Sbjct: 144 RFEKIVGRKDVFSKVLDGLREAKKVGLQPIKINCVVTRGCNDDEILDFVELGRQSGFSIR 203

Query: 266 IKPYYLHHPDLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324
              Y         G   + ++ +  G +I+  ++EK  GL      ++LP   G   +  
Sbjct: 204 FIEY-----MPFDGRHLWDVSRLVPGMEIIEKIREKY-GL------VELPREPGSTAV-V 250

Query: 325 HNIKKVGNGSYCI 337
           +      +G+  +
Sbjct: 251 YEFADGADGNVAV 263


>gi|167767374|ref|ZP_02439427.1| hypothetical protein CLOSS21_01893 [Clostridium sp. SS2/1]
 gi|167711349|gb|EDS21928.1| hypothetical protein CLOSS21_01893 [Clostridium sp. SS2/1]
          Length = 440

 Score = 54.0 bits (129), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 15/136 (11%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           E  D   D  +  L     +   R  +K+   C  +C +C      G  +   +  ++  
Sbjct: 128 EVIDIAHDQEYESLHVEQLKEHTRAYIKVQDGCNQFCSYCIIPYARGRVRSRKM--EEVL 185

Query: 133 AALAYIQEKSQ----IWEVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             +  + +       I  +  T  G D   L    L  +L+ +  I  V+ +R  S    
Sbjct: 186 EEITNLTKHGCQEFVITGIHVTSYGKD---LGDVTLIDLLEEIAKIPEVKRIRLGS---- 238

Query: 187 VDPQRINPELIQCLKE 202
           ++P  I  + +  L +
Sbjct: 239 LEPGFITKDTLDRLSK 254


>gi|78060080|ref|YP_366655.1| GTP cyclohydrolase subunit MoaA [Burkholderia sp. 383]
 gi|77964630|gb|ABB06011.1| GTP cyclohydrolase subunit MoaA [Burkholderia sp. 383]
          Length = 374

 Score = 53.6 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 58/233 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
           L ++  C   C +C  RE  G+    + SS+    A L  I        + ++  TGG+P
Sbjct: 46  LSVIDQCNFRCGYCMPRESFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEP 105

Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
           L+   + L+ +++ L  +  V                    + LR    SRV +     I
Sbjct: 106 LL--RRNLEALIERLAALTTVDGKPVEIALTTNGSLLAAKARTLRDAGLSRVTVSL-DAI 162

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
           +  + + + +A  PV   +             A I     AG   +   +V+ +G+NDD 
Sbjct: 163 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGVNDD- 208

Query: 252 EILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296
             +  L+R F +  +      Y         G S +     +     ++++  
Sbjct: 209 -QILPLVRHFRQSGVAVRFIEY-----MDVGGASFWSGDKVVPAARMRELIDE 255


>gi|95929921|ref|ZP_01312661.1| molybdenum cofactor synthesis-like [Desulfuromonas acetoxidans DSM
           684]
 gi|95133890|gb|EAT15549.1| molybdenum cofactor synthesis-like [Desulfuromonas acetoxidans DSM
           684]
          Length = 325

 Score = 53.6 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + CR+C     V       VLS ++           + I ++  TGG+PL+ 
Sbjct: 16  LSVTDRCNMRCRYCMPAHGVEKVTHDDVLSYEELYRISQA-AVTTGIEKIRVTGGEPLV- 73

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYI---AIHA 213
             K +   L+ L  I  ++ L   +         +  E+   LK+AG K + +   +++A
Sbjct: 74  -RKGIVPFLERLSRIDGLKQLVLTTNGL------MLDEMAYDLKQAGVKHLNVSLDSLNA 126

Query: 214 NHPYEFS--EEAIAAISRLANA---GIILLSQSVLLKGINDDP-EILANLMR 259
           N   E +     +  ++ LA A   G+ +    V+++G+ND   E  A L R
Sbjct: 127 NTFAEVTRGANLVKVLAGLAAAERVGLPVKLNMVVMRGVNDHEIERFAELTR 178


>gi|313904193|ref|ZP_07837572.1| protein of unknown function DUF512 [Eubacterium cellulosolvens 6]
 gi|313470995|gb|EFR66318.1| protein of unknown function DUF512 [Eubacterium cellulosolvens 6]
          Length = 461

 Score = 53.6 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 36/161 (22%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       V  T  D    
Sbjct: 84  LMDNYKSCRNKCVFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YVTLTNMD---- 134

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
               + ++++    ++ + I      V   +P+         L++        +H  H  
Sbjct: 135 -DHDIDRIIR--YRMEPINI-----SVQTTNPE---------LRKT------MLHNRHAG 171

Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
           E        + RLA+AGI +  Q VL KG+ND  E+  ++ 
Sbjct: 172 EIFP----KLRRLADAGIEMNGQIVLCKGLNDGEELERSIR 208


>gi|317471603|ref|ZP_07930947.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp.
           3_2_56FAA]
 gi|316900918|gb|EFV22888.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp.
           3_2_56FAA]
          Length = 324

 Score = 53.6 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 21/169 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + CR+C   ++   +   +LS ++  +          I +   TGG+PL+  
Sbjct: 14  ISVTDRCNLRCRYCMPEDIPSVEHTDILSYEELLSICES-AADLGICKFKITGGEPLV-- 70

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215
            K     ++ L+ +  V+ +   S   +++P       ++ LKEAG    I I  +    
Sbjct: 71  RKGCAGFIERLKQLPGVRQVTLTSNGLLLEPY------LERLKEAGID-GINISLDTLDE 123

Query: 216 --PYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
               E +        ++A+   A  G+      V++KGINDD EIL  L
Sbjct: 124 KKYKEITGKTGVQTVLSAVRNSARMGLNTKVNCVVMKGINDD-EILDLL 171


>gi|254173709|ref|ZP_04880381.1| metallo cofactor biosynthesis protein [Thermococcus sp. AM4]
 gi|214032401|gb|EEB73231.1| metallo cofactor biosynthesis protein [Thermococcus sp. AM4]
          Length = 400

 Score = 53.6 bits (128), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 37/208 (17%), Positives = 84/208 (40%), Gaps = 26/208 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FT 150
           R P  +  +    C + C+ C R E +       LS+++ +A +  + +  + + ++  T
Sbjct: 13  RKPVLVFWETTKACQLKCKHC-RAEAILQALPGELSTEEGKALIDSLTDFGRPYPILILT 71

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GGDPL+         +  L      + +R     P V P  +  E I+ +  +G    ++
Sbjct: 72  GGDPLMRKD------IFELIDYAVEKGVRVGL-APAVTP-LLTEETIERIARSGVK-AVS 122

Query: 211 IHANHP----------YEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           I  + P           E + E  + AI      G+ +   +V+++   +  E L  +++
Sbjct: 123 ISLDSPFPDVHDAIRGIEGTWEKTVWAIKEFLKHGLSVQVNTVVMR---ETVEGLPEMVK 179

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTI 287
              +L ++ + + +     G  +F   +
Sbjct: 180 LLKDLGVEIWEVFYLVPT-GRGNFESDL 206


>gi|326434948|gb|EGD80518.1| molybdenum cofactor synthesis 1 isoform 2 [Salpingoeca sp. ATCC
           50818]
          Length = 399

 Score = 53.2 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 32/178 (17%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G  H Y   + + L   C + C++C   E V  S K  +L+  +    LA I   + + +
Sbjct: 82  GRQHSY---LRISLTERCNLRCQYCMPEEGVQLSPKDELLTFDELVR-LARIFASNGVSK 137

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           +  TGG+PL+    +L  +++  R +  ++ +   +              +  LK+AG  
Sbjct: 138 IRLTGGEPLLYP--QLSDLIREFRGMPGIESVGITTNGLT------LARKLDALKDAGL- 188

Query: 207 VYIAIHAN------HPYEFSEEAIAA--------ISRLANAGIILLSQSVLLKGINDD 250
                H N      H ++F+  +           I    +AG+      VL + +NDD
Sbjct: 189 ----THLNVSLDTFHEHKFNIISRRRGLDRVFRGIDAAIDAGLTPKINVVLTRNVNDD 242


>gi|331081966|ref|ZP_08331094.1| hypothetical protein HMPREF0992_00018 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330405561|gb|EGG85091.1| hypothetical protein HMPREF0992_00018 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 460

 Score = 53.2 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 68/188 (36%), Gaps = 41/188 (21%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       V  T      +
Sbjct: 83  LMDEYRSCRNKCVFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 132

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           S   +             +I+ +H     +  Q  NP+L  + L                
Sbjct: 133 SDHDID------------RIIHYHLAPINISFQTTNPKLRCKMLN--------------- 165

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             F+ +    + RL  AGI +  Q VL KG+ND  E+  ++       +  P+      +
Sbjct: 166 NRFAGDIFPKVQRLFEAGIEMNGQIVLCKGLNDKAELERSICDL---TQYLPHLRSVSVV 222

Query: 277 AAGTSHFR 284
             G S +R
Sbjct: 223 PVGLSKYR 230


>gi|296328428|ref|ZP_06870954.1| 2-methylthioadenine synthetase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296154502|gb|EFG95294.1| 2-methylthioadenine synthetase [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 435

 Score = 53.2 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
            R  +K+   C  +C +C         K      ++    +  + E     E+I  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEIILIGIDL 202

Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                        + +L+ +  IK ++ +R  S    V P +I    I+  K   K +  
Sbjct: 203 SAYGEDFEEKDNFESLLEDILRIKDLKRVRIGS----VYPDKITDRFIELFK--NKKLMP 256

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275


>gi|19704549|ref|NP_604111.1| Fe-S oxidoreductase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
 gi|19714835|gb|AAL95410.1| Fe-S oxidoreductase [Fusobacterium nucleatum subsp. nucleatum ATCC
           25586]
          Length = 435

 Score = 53.2 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
            R  +K+   C  +C +C         K      ++    +  + E     E+I  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEIILIGIDL 202

Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                        + +L+ +  IK ++ +R  S    V P +I    I+  K   K +  
Sbjct: 203 SAYGEDFEEKDNFESLLEDILRIKDLKRVRIGS----VYPDKITDRFIELFK--NKKLMP 256

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275


>gi|332797327|ref|YP_004458827.1| Radical SAM domain-containing protein [Acidianus hospitalis W1]
 gi|332695062|gb|AEE94529.1| Radical SAM domain protein [Acidianus hospitalis W1]
          Length = 396

 Score = 53.2 bits (127), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 99/235 (42%), Gaps = 35/235 (14%)

Query: 69  ILPEEREDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTV 125
            +PEE +D I +   +     + ++   +L   L L + C   C +CF++     +  + 
Sbjct: 38  EVPEELKDIIEEGFSATFDEFLQKFKKEVLEPTLVLTYRCNFDCVYCFQKAF---RNNSS 94

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
           +S K     + Y++  +   +V  T  GG+PL L  +R++++   L  +K+       S 
Sbjct: 95  VSDKVVRGFIKYVRTHANGRKVRVTYFGGEPL-LELRRIKEISTQLSDLKY-------SF 146

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS---- 239
             + +   +   +   LK  G   ++ I  + P E  ++    +    +  IIL +    
Sbjct: 147 SIVTNGSLLTRHVFDELKSLGLT-HVQITLDGPREVHDKRRYFVGGKGSYDIILKNLKEI 205

Query: 240 Q---SVLLKGIN---DDPEILANLMRTFVELRIK-----PYYLHHPDLAAGTSHF 283
           Q   +V+L+ +N   ++ +   +L+R   +  I      P+ +H  D      ++
Sbjct: 206 QDEVNVVLR-VNIDVNNLDSFRDLLRDLKQNGITKVRLDPHLVH--DNVFRNEYW 257


>gi|260588685|ref|ZP_05854598.1| PDZ domain protein [Blautia hansenii DSM 20583]
 gi|260541160|gb|EEX21729.1| PDZ domain protein [Blautia hansenii DSM 20583]
          Length = 460

 Score = 52.8 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 68/188 (36%), Gaps = 41/188 (21%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       V  T      +
Sbjct: 83  LMDEYRSCRNKCVFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 132

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           S   +             +I+ +H     +  Q  NP+L  + L                
Sbjct: 133 SDHDID------------RIIHYHLAPINISFQTTNPKLRCKMLN--------------- 165

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             F+ +    + RL  AGI +  Q VL KG+ND  E+  ++       +  P+      +
Sbjct: 166 NRFAGDIFPKVQRLFEAGIEMNGQIVLCKGLNDKAELERSICDL---TQYLPHLRSVSVV 222

Query: 277 AAGTSHFR 284
             G S +R
Sbjct: 223 PVGLSKYR 230


>gi|313114943|ref|ZP_07800439.1| putative FeS-containing Cyanobacterial-specific oxidoreductase
           [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622736|gb|EFQ06195.1| putative FeS-containing Cyanobacterial-specific oxidoreductase
           [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 441

 Score = 52.8 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 48/167 (28%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156
             H C  +C FCF  ++    + ++    D E        YI                  
Sbjct: 80  QKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 125

Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           +    + +++K      H+  +    H+     +PQ      ++ L              
Sbjct: 126 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 162

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
                  E +  + RL   GI +  Q VL +GIND  E+   L    
Sbjct: 163 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGINDGDELRRTLSDLL 204


>gi|291550924|emb|CBL27186.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus
           torques L2-14]
          Length = 459

 Score = 52.8 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 41/188 (21%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+   H C   C FCF  +M    + T+           Y ++      + F  G+ + L
Sbjct: 84  LMDEYHSCHNKCIFCFIDQMPPGMRDTL-----------YFKDDDS--RLSFLQGNYVTL 130

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           ++         +      +I+R+      +  Q  NPEL  + L           H    
Sbjct: 131 TN---------MSEKDMNRIVRYRLEPINISFQTTNPELRCKML-----------H---- 166

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             F+ EA+  +  L   GI +  Q VL +G+ND  E+  ++ R   +    P       +
Sbjct: 167 NRFAGEALKKVDILYQGGIEMNGQIVLCRGVNDGEELERSI-RDLTQ--YLPLLRSVSVV 223

Query: 277 AAGTSHFR 284
             G S +R
Sbjct: 224 PVGLSKYR 231


>gi|269215395|ref|ZP_06159249.1| Fe-S oxidoreductase, NifB/MoaA family [Slackia exigua ATCC 700122]
 gi|269130882|gb|EEZ61957.1| Fe-S oxidoreductase, NifB/MoaA family [Slackia exigua ATCC 700122]
          Length = 457

 Score = 52.8 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 62/181 (34%), Gaps = 46/181 (25%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           D  +   +  C   C FCF R++    + +++   D      +     Q      T    
Sbjct: 93  DGAIFDDIKTCRNACVFCFMRQLPADARDSLMLRDD-----DWRLSFLQGNFTSLTA--- 144

Query: 155 LILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
             L+ +   ++++      HV  LR   H          I PE+        +   I  H
Sbjct: 145 --LTDEEADEIIER-----HVSPLRVSLHC---------ITPEV--------RRTMIGRH 180

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL-----MRTFVELRIK 267
           A H  E        + +L   GI +  Q VL+ GIND  E++  L           + I 
Sbjct: 181 APHGVEM-------MEKLLAGGIEMYMQIVLVPGINDGRELMKTLTWAYTHEGIANVGIV 233

Query: 268 P 268
           P
Sbjct: 234 P 234


>gi|262068261|ref|ZP_06027873.1| Fe-S oxidoreductase [Fusobacterium periodonticum ATCC 33693]
 gi|291377999|gb|EFE85517.1| Fe-S oxidoreductase [Fusobacterium periodonticum ATCC 33693]
          Length = 439

 Score = 52.8 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
            R  +K+   C  +C +C         K      ++    +  + E     EVI  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202

Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                        + +L+ +  IK ++ +R  S    V P +I  + I   K   K +  
Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIKDLKRVRIGS----VYPDKITDKFIDLFK--NKNLMP 256

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275


>gi|237740317|ref|ZP_04570798.1| Fe-S oxidoreductase [Fusobacterium sp. 2_1_31]
 gi|229422334|gb|EEO37381.1| Fe-S oxidoreductase [Fusobacterium sp. 2_1_31]
          Length = 439

 Score = 52.8 bits (126), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
            R  +K+   C  +C +C         K      ++    +  + E     EVI  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202

Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                        + +L+ +  IK ++ +R  S    V P +I  + I   K   K +  
Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIKDLKRVRIGS----VYPDKITDKFIDLFK--NKNLMP 256

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275


>gi|298675037|ref|YP_003726787.1| radical SAM domain-containing protein [Methanohalobium evestigatum
           Z-7303]
 gi|298288025|gb|ADI73991.1| Radical SAM domain protein [Methanohalobium evestigatum Z-7303]
          Length = 315

 Score = 52.8 bits (126), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 46/242 (19%), Positives = 81/242 (33%), Gaps = 58/242 (23%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H++  R+ L +   C + C++C R          G     +   +  E     ++E   
Sbjct: 33  QHKF-GRMHLAVAPKCNIQCKYCIRDNDCVNECRPGVTSKVLTPQEALEKTRQVLEEHPF 91

Query: 144 IWEVIFTG-GDPLILSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           I  +   G GDPL  + +  +  K++K      +V I+   +      P RI+  L    
Sbjct: 92  IKVIAIAGPGDPL-ANDETFETFKLIKE--EFPNV-IICMSTNGLA-LPDRIDDML---- 142

Query: 201 KEAGKPVYIAIHANHPY-EFSEEAIAA------------------------ISRLANAGI 235
            +AG         N    E   +                            I R   AGI
Sbjct: 143 -DAGVQTLTVT-VNAVDPEIQRQICDRVVYNGKLYKGKEAAELLINNQLEGIKRAIEAGI 200

Query: 236 ILLSQSVLLKGINDD--PEILANLMR-TFVELRIKPYYLHHPDLAAGTSH--FRLTIEEG 290
           ++   +VL+  +NDD   +I   +       + I P       L     +  +R+  EE 
Sbjct: 201 VIKINTVLVPDVNDDHVVDIAKKMNELGVFIMNIMP-------LIPQAEYAEWRVPTEEE 253

Query: 291 QK 292
           +K
Sbjct: 254 RK 255


>gi|34763184|ref|ZP_00144150.1| Fe-S OXIDOREDUCTASE (1.8.-.-) [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
 gi|27887153|gb|EAA24258.1| Fe-S OXIDOREDUCTASE (1.8.-.-) [Fusobacterium nucleatum subsp.
           vincentii ATCC 49256]
          Length = 435

 Score = 52.4 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
            R  +K+   C  +C +C         K      ++    +  + E     EVI  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202

Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                        + +L+ +  IK ++ +R  S    V P +I    I+  K   + +  
Sbjct: 203 SAYGKDFKEKDNFESLLEDILKIKDLKRVRIGS----VYPDKITDRFIELFK--NENLMP 256

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275


>gi|14591390|ref|NP_143468.1| hypothetical protein PH1615 [Pyrococcus horikoshii OT3]
 gi|3258044|dbj|BAA30727.1| 420aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 420

 Score = 52.4 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 37/186 (19%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKS 142
           G++ R  + I ++    C + C FC   E   S+   +    D +  + +      ++  
Sbjct: 108 GLIDRGTNLIQVRGSTGCNMSCIFCSVDEGPYSRTRKLDFVVDIDYLMKWFNLVAKEKGK 167

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            +   +   G+PL+     + ++++ LR   HV ++   S   +     ++ +L++ L E
Sbjct: 168 GLEAHLDAQGEPLMYP--FIVELVQALRDHPHVSVISMQSNGVL-----LDDKLVEELAE 220

Query: 203 AGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           AG   V ++IH                  +H  E +E        L NAGI +L   V++
Sbjct: 221 AGLDRVNLSIHSLDPKKAKMLMGIKDYDLSHVLEMAEA-------LVNAGIDVLIAPVII 273

Query: 245 KGINDD 250
            GINDD
Sbjct: 274 FGINDD 279


>gi|328555376|gb|AEB25868.1| molybdenum cofactor biosynthesis protein A [Bacillus
           amyloliquefaciens TA208]
 gi|328913747|gb|AEB65343.1| molybdenum cofactor biosynthesis protein A [Bacillus
           amyloliquefaciens LL3]
          Length = 341

 Score = 52.4 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 29/176 (16%)

Query: 93  YPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143
             DR L    + +   C   C +C   E+ G       K  +LS ++ E        +  
Sbjct: 11  KRDRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLQKTELLSFEELERLAKLFVGRFG 70

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIV---DPQ----RIN 193
           + ++  TGG+PL+     + ++++ L  I  ++ +      S +P+      Q    R+ 
Sbjct: 71  VEKIRLTGGEPLMRKD--MPELIRKLARIPGLKDIAMTTNGSLLPVYAEKLKQAGLHRVT 128

Query: 194 PELIQCLKEAGKPVY-IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
             L     E  K +    +  N       + +  I     AG+ +    V+ KG+N
Sbjct: 129 VSLDSLEDERFKAINGRGVSVN-------KVLEGIEAAKEAGLGVKINMVVQKGVN 177


>gi|308175399|ref|YP_003922104.1| molybdenum cofactor biosynthesis protein A [Bacillus
           amyloliquefaciens DSM 7]
 gi|307608263|emb|CBI44634.1| molybdenum cofactor biosynthesis protein A [Bacillus
           amyloliquefaciens DSM 7]
          Length = 344

 Score = 52.4 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 29/176 (16%)

Query: 93  YPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143
             DR L    + +   C   C +C   E+ G       K  +LS ++ E        +  
Sbjct: 11  KRDRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLQKTELLSFEELERLAKLFVGRFG 70

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIV---DPQ----RIN 193
           + ++  TGG+PL+     + ++++ L  I  ++ +      S +P+      Q    R+ 
Sbjct: 71  VEKIRLTGGEPLMRKD--MPELIRKLARIPGLKDIAMTTNGSLLPVYAEKLKQAGLHRVT 128

Query: 194 PELIQCLKEAGKPVY-IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
             L     E  K +    +  N       + +  I     AG+ +    V+ KG+N
Sbjct: 129 VSLDSLEDERFKAINGRGVSVN-------KVLEGIEAAKEAGLGVKINMVVQKGVN 177


>gi|260494169|ref|ZP_05814300.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_33]
 gi|260198315|gb|EEW95831.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_33]
          Length = 435

 Score = 52.4 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
            R  +K+   C  +C +C         K      ++    +  + E     EVI  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202

Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                        + +L+ +  I+ ++ +R  S    V P +I    I+  K   K +  
Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIRDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275


>gi|256027911|ref|ZP_05441745.1| Fe-S oxidoreductase [Fusobacterium sp. D11]
 gi|289765860|ref|ZP_06525238.1| fe-s oxidoreductase [Fusobacterium sp. D11]
 gi|289717415|gb|EFD81427.1| fe-s oxidoreductase [Fusobacterium sp. D11]
          Length = 435

 Score = 52.4 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
            R  +K+   C  +C +C         K      ++    +  + E     EVI  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202

Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                        + +L+ +  I+ ++ +R  S    V P +I    I+  K   K +  
Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIRDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275


>gi|237744247|ref|ZP_04574728.1| Fe-S oxidoreductase [Fusobacterium sp. 7_1]
 gi|229431476|gb|EEO41688.1| Fe-S oxidoreductase [Fusobacterium sp. 7_1]
          Length = 435

 Score = 52.4 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153
            R  +K+   C  +C +C         K      ++    +  + E     EVI  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202

Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                        + +L+ +  I+ ++ +R  S    V P +I    I+  K   K +  
Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIRDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275


>gi|255322313|ref|ZP_05363459.1| conserved hypothetical protein [Campylobacter showae RM3277]
 gi|255300686|gb|EET79957.1| conserved hypothetical protein [Campylobacter showae RM3277]
          Length = 429

 Score = 52.4 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 35/212 (16%)

Query: 63  QKEELNILPEEREDPIGDNNH--SPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREMV 118
            K+E      + +DP  +  +  S  K IV  Y    +  +K+   C   C +C     +
Sbjct: 109 SKKEDINALLKSQDPFFELGNLKSIDKNIVTNYENHTKAFIKIQEGCDFACSYCI----I 164

Query: 119 GSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIK 173
            + +G   S  + EA L    I   +   E++ TG +           L ++L  L  I 
Sbjct: 165 PAVRGKARSMDE-EAILREAKILAYNGYNELVLTGTNIGSYGKDTGSSLGRLLGRLGKIG 223

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
            ++ +R  S    ++P +I+    + L+E+    ++ I   H  E       A+ R+   
Sbjct: 224 GIKRIRLGS----IEPSQIDESFREILRESWLERHLHIALQHTSE-------AMLRIMRR 272

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELR 265
                +Q+        D E+   L +    L 
Sbjct: 273 ----RNQAF------RDLELFLELSQMGFALG 294


>gi|154175462|ref|YP_001408235.1| hypothetical protein CCV52592_1067 [Campylobacter curvus 525.92]
 gi|112802784|gb|EAU00128.1| conserved hypothetical protein [Campylobacter curvus 525.92]
          Length = 416

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 39/179 (21%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     + ++++     AA  Y        E++ 
Sbjct: 132 HTKAFIKIQEGCNFACSYCIIPSVRGKARSMDENSIINEAKILAANGY-------NELVL 184

Query: 150 TGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +           L ++L  L  I  ++ +R  S    ++P +I+    + LKE+   
Sbjct: 185 TGTNIGSYGKDTGSSLGRLLANLGKIPGIRRIRLGS----IEPSQIDESFREILKESWLE 240

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
            ++ I   H  E        + R+        +Q+      +D       L      L 
Sbjct: 241 RHLHIALQHTSE-------KMLRIMRR----RNQA-----FSD-----LELFNELSSLG 278


>gi|302386478|ref|YP_003822300.1| protein of unknown function DUF512 [Clostridium saccharolyticum
           WM1]
 gi|302197106|gb|ADL04677.1| protein of unknown function DUF512 [Clostridium saccharolyticum
           WM1]
          Length = 459

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 47/176 (26%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       V  T      +
Sbjct: 82  LMSEYRSCRNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 131

Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           S   + +++K  L  I     +  H+  P +          Q L           H    
Sbjct: 132 SDHDIDRIIKFKLAPI----NISVHTTNPSL--------RCQML-----------H---- 164

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE---ILANLMRTFVELRIKPY 269
             F+ +A+  I +L  A I +  Q VL KG+ND  E    + +L +        PY
Sbjct: 165 NRFAGKALEKIQKLYEAEIPMNGQIVLCKGVNDGKELERTIEDLSKFL------PY 214


>gi|331085847|ref|ZP_08334930.1| hypothetical protein HMPREF0987_01233 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330406770|gb|EGG86275.1| hypothetical protein HMPREF0987_01233 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 448

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 41/188 (21%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       +  T      +
Sbjct: 92  LMDEYRSCRNKCMFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 141

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           S   + ++++            +H     +     NPEL  + L           H    
Sbjct: 142 SDHDIDRIVQ------------YHLEPINISFHTTNPELRCKML-----------H---- 174

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             F+ +A+  +  L   GI +  Q VL KGIND  E+  ++          P+      +
Sbjct: 175 NRFAGDALKKVQTLYEGGITMNGQIVLCKGINDGEELERSIRD---MTAYLPHLQSVSVV 231

Query: 277 AAGTSHFR 284
             G + FR
Sbjct: 232 PVGLTKFR 239


>gi|145220160|ref|YP_001130869.1| GTP cyclohydrolase subunit MoaA [Prosthecochloris vibrioformis DSM
           265]
 gi|145206324|gb|ABP37367.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeovibrioides DSM
           265]
          Length = 351

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 18/170 (10%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAALAYIQEKSQIWEVIF 149
           HR      + +   C + C +C R E      G T +S  +    ++ + E + I ++  
Sbjct: 32  HRQVSYARIAVTGACNLRCAYCMREEHESDSSGRTKMSFTELTTLISVLAE-AGITKIRL 90

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           TGG+PL+     +  ++ T +    ++ +   +   +     ++  L   L      V +
Sbjct: 91  TGGEPLLRGD--IADLVATAKNTPGIKTVSITTNGLL-----LDRHLDALLSAGIDAVNM 143

Query: 210 AIHANHPYEFSEEAI--------AAISRLAN-AGIILLSQSVLLKGINDD 250
           +I +     F             A + RL +   + L    V+L+GINDD
Sbjct: 144 SIDSLRADRFLAITRRNEFERTKANLDRLLSLESVPLKINVVMLRGINDD 193


>gi|225572012|ref|ZP_03780876.1| hypothetical protein RUMHYD_00306 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040545|gb|EEG50791.1| hypothetical protein RUMHYD_00306 [Blautia hydrogenotrophica DSM
           10507]
          Length = 460

 Score = 52.0 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 38/162 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       V  T      +
Sbjct: 83  LMDEYRSCSNKCIFCFIDQMPKGMRKTLYFKDD-DSRLSFLQGN----YVTLT-----NM 132

Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           S   + ++L+  L  I     + F +     +PQ       Q L           H    
Sbjct: 133 SDHDIDRILQYRLEPI----NISFQT----TNPQL----RCQLL-----------H---- 165

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
             F+ +A+  + RL    I +  Q VL KGIND  E+  +L 
Sbjct: 166 NRFAGKALEKVRRLYEGNIAMNGQIVLCKGINDGQELEKSLS 207


>gi|325661997|ref|ZP_08150616.1| hypothetical protein HMPREF0490_01354 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471660|gb|EGC74879.1| hypothetical protein HMPREF0490_01354 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 448

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 41/188 (21%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       +  T      +
Sbjct: 92  LMDEYRSCRNKCMFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 141

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           S   + ++++            +H     +     NPEL  + L           H    
Sbjct: 142 SDHDIDRIVQ------------YHLEPINISFHTTNPELRCKML-----------H---- 174

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             F+ +A+  +  L   GI +  Q VL KGIND  E+  ++          P+      +
Sbjct: 175 NRFAGDALKKVQTLYEGGITMNGQIVLCKGINDGEELERSIRD---MTAYLPHLQSVSVV 231

Query: 277 AAGTSHFR 284
             G + FR
Sbjct: 232 PVGLTKFR 239


>gi|70726341|ref|YP_253255.1| hypothetical protein SH1340 [Staphylococcus haemolyticus JCSC1435]
 gi|68447065|dbj|BAE04649.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 448

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   +   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NAGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  LK + K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLEEIDGLERIRISS----IEASQLTDEVIDVLKRSNK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHV 257


>gi|257439161|ref|ZP_05614916.1| PDZ domain protein [Faecalibacterium prausnitzii A2-165]
 gi|257198412|gb|EEU96696.1| PDZ domain protein [Faecalibacterium prausnitzii A2-165]
          Length = 442

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 48/167 (28%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156
             H C  +C FCF  ++    + ++    D E        YI                  
Sbjct: 82  QKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 127

Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           +    + +++K      H+  +    H+     +PQ      ++ L              
Sbjct: 128 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 164

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
                  E +  + RL   GI +  Q VL +GIND  E+   L    
Sbjct: 165 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGINDGEELRRTLGDLL 206


>gi|78777220|ref|YP_393535.1| MiaB-like tRNA modifying enzyme [Sulfurimonas denitrificans DSM
           1251]
 gi|78497760|gb|ABB44300.1| MiaB-like tRNA modifying enzyme [Sulfurimonas denitrificans DSM
           1251]
          Length = 415

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 14/127 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C   C +C    + G  +       D E  L  I+   ++   E I TG
Sbjct: 133 KSRAFIKIQEGCNFRCSYCIIPYVRGDARSM-----DEEKILEQIRRLARNGFGEFILTG 187

Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            +       +   +  ++K +  I+ V+ +R  S    V+P +IN E  + L E     +
Sbjct: 188 TNVGSYGQKNDSSIASLMKKISQIRGVRRIRVGS----VEPIQINDEFKEILDEPWLERH 243

Query: 209 IAIHANH 215
           + I   H
Sbjct: 244 LHIALQH 250


>gi|323702404|ref|ZP_08114069.1| RNA modification enzyme, MiaB family [Desulfotomaculum nigrificans
           DSM 574]
 gi|323532710|gb|EGB22584.1| RNA modification enzyme, MiaB family [Desulfotomaculum nigrificans
           DSM 574]
          Length = 441

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 16/125 (12%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---- 151
           R  LK+   C  +C +C      G  + + L     +AA   +Q+     E++ TG    
Sbjct: 145 RAFLKIQEGCNSFCAYCIIPYARGPVR-SRLPENVLKAATELVQQ--GYQEIVLTGIHIG 201

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
               D     +  L  +++ L  +  ++ LR  S    V+P  IN  LI+ +      + 
Sbjct: 202 AYGQD-FTAQNIDLAWLVERLAAVPGLRRLRLGS----VEPHDINTALIEAVANHP-NIC 255

Query: 209 IAIHA 213
             +H 
Sbjct: 256 RHLHI 260


>gi|297616758|ref|YP_003701917.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297144595|gb|ADI01352.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 326

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 20/163 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + CR+C     V       +LS ++    +  +  +  I +V  TGG+PL+ 
Sbjct: 14  VSVTDRCNLRCRYCMPEAGVELKPHSEILSLEEIHRIIK-VGTRVGIRKVRLTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
             + L ++++ +R I  +  +   +   +       PE+   LKEAG   + +++   +P
Sbjct: 72  -RRNLSRLVQMIRTIDLIDDVAITTNGLLF------PEMAGELKEAGLHRLNVSLDTMNP 124

Query: 217 YE---FS--EEAIAAISRLANA----GIILLSQSVLLKGINDD 250
            +    +       A+  +  A       +   +V+++GINDD
Sbjct: 125 EKYSFITRNGSLKQALRAIETALALEFHPVKINTVVMRGINDD 167


>gi|15618388|ref|NP_224673.1| hypothetical protein CPn0477 [Chlamydophila pneumoniae CWL029]
 gi|4376761|gb|AAD18617.1| Hypothetical Protein CPn_0477 [Chlamydophila pneumoniae CWL029]
          Length = 421

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  +K+   C  +C +C    + G            E  LA I         EV+  G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPA-----EKILAEIAGVVDQGYREVVIAG 188

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
              GD      + L  +++ +  I  ++ +R  S    +DP  I  +L + +  +   
Sbjct: 189 INVGD-YCDGERSLASLIEQVDRIPGIERIRISS----IDPDDITEDLHRAITSSRHT 241


>gi|257063684|ref|YP_003143356.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
 gi|256791337|gb|ACV22007.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
          Length = 457

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 62/180 (34%), Gaps = 44/180 (24%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           D  +   + VC   C FCF R +    + T +L   D    L+++Q          T   
Sbjct: 93  DGAIFDGIRVCRNACMFCFMRMLPKESRDTLMLRDDDWR--LSFLQGN----FTTLT--- 143

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
              LS +   ++ +      HV  LR                 + C+    +   I  HA
Sbjct: 144 --NLSEEDADEITER-----HVSPLRVS---------------LHCISPEVRSKMIGRHA 181

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN-----LMRTFVELRIKP 268
           +H           + +L   GI L  Q VLL G+ND  E++       L      + I P
Sbjct: 182 DHGVRM-------MEKLLAGGIELYMQIVLLPGVNDGAELMKTLAWAYLHEGIANVGIVP 234


>gi|317486219|ref|ZP_07945053.1| molybdenum cofactor biosynthesis protein A [Bilophila wadsworthia
           3_1_6]
 gi|316922518|gb|EFV43770.1| molybdenum cofactor biosynthesis protein A [Bilophila wadsworthia
           3_1_6]
          Length = 347

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 20/162 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C + C +C           +VL  ++ E  +  +     + +V  TGG+P   +
Sbjct: 30  LSVTDRCNLRCTYCRSGMETFIPHESVLRYEEMEQLVD-MAMDMGVEKVRLTGGEPF--A 86

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215
            K     L+ LR       +R  +   ++ P       IQ LK  G    + +  +    
Sbjct: 87  RKGFADFLERLRAAHPALDIRVTTNGTLIGPH------IQTLKAIGLN-AVNLSLDTFDR 139

Query: 216 -------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                    +   +    +  L +AGI     +V L+G NDD
Sbjct: 140 DKFEQITGRDLFGKVRENMDALLDAGIPFKLNAVALRGFNDD 181


>gi|295103495|emb|CBL01039.1| Fe-S oxidoreductase, related to NifB/MoaA family [Faecalibacterium
           prausnitzii SL3/3]
          Length = 445

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 52/170 (30%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156
             H C  +C FCF  ++    + ++    D E        YI                  
Sbjct: 82  AKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 127

Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           +    + +++K      H+  +    H+     +PQ      ++ L              
Sbjct: 128 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 164

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
                  E +  + RL   GI +  Q VL +G+ND       L RT  +L
Sbjct: 165 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGVNDG----DELRRTLADL 205


>gi|325265090|ref|ZP_08131817.1| PDZ domain protein [Clostridium sp. D5]
 gi|324029780|gb|EGB91068.1| PDZ domain protein [Clostridium sp. D5]
          Length = 435

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 41/188 (21%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+           Y ++      + F  G+ + L
Sbjct: 82  LMDEYRSCRNKCMFCFIDQMPAGMRDTL-----------YFKDDDS--RLSFLQGNYITL 128

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           ++         +      +I+++H     +     NPEL  + L           H    
Sbjct: 129 TN---------MSDHDVERIVKYHLEPINISFHTTNPELRCKML-----------H---- 164

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             F+ +A+  +  L   GI +  Q VL KG+ND  E+  ++          P       +
Sbjct: 165 NRFAGDALKKVDILYQGGIEMNGQIVLCKGVNDGAELERSIRDL---TGYLPLLQSVSVV 221

Query: 277 AAGTSHFR 284
             G + FR
Sbjct: 222 PVGLTKFR 229


>gi|18978000|ref|NP_579357.1| molybdenum cofactor biosynthesis protein A [Pyrococcus furiosus DSM
           3638]
 gi|18893779|gb|AAL81752.1| hypothetical protein PF1628 [Pyrococcus furiosus DSM 3638]
          Length = 419

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 75/190 (39%), Gaps = 45/190 (23%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFC---------FRREMVGSQKGTVLSSKDTEAALAYI 138
           G++ R  + I ++    C + C FC          R          ++   D  A     
Sbjct: 108 GLIDRGTNLIQVRGSTGCNLSCIFCSVDEGPYSRTRNLDFVVDVDYLMKWFDWVAK---- 163

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           ++   +   +   G+PL+     + ++++ LR   HV ++   S   +     ++ +L++
Sbjct: 164 EKGKGLEAHLDAQGEPLLYP--YIVELVQELRSHPHVSVISMQSNGVL-----LDEKLVE 216

Query: 199 CLKEAGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQ 240
            L EAG   V ++IH                  NH  E +E        L NAGI +L  
Sbjct: 217 ELAEAGLDRVNLSIHSLDPEKAKMLMGMKNYDLNHVLEMAE-------ALVNAGIDVLIA 269

Query: 241 SVLLKGINDD 250
            V++ GIND+
Sbjct: 270 PVIIFGINDN 279


>gi|319957025|ref|YP_004168288.1| miab-like tRNA modifying enzyme [Nitratifractor salsuginis DSM
           16511]
 gi|319419429|gb|ADV46539.1| MiaB-like tRNA modifying enzyme [Nitratifractor salsuginis DSM
           16511]
          Length = 421

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 14/122 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C     V     +    +     +  +       E I TG +
Sbjct: 135 KSRAFIKIQEGCNFRCSYCII-PFVRGNARSH-DEEQILEQVRRLAAN-GFGEFILTGTN 191

Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                  R   L K+LK +  I+ V+ +R  S    ++P +I+ E ++ L E     ++A
Sbjct: 192 VGSYGRDRGTSLAKLLKRMSQIRGVRRIRIGS----LEPIQIDAEFMELLAEP----WMA 243

Query: 211 IH 212
            H
Sbjct: 244 RH 245


>gi|160942964|ref|ZP_02090202.1| hypothetical protein FAEPRAM212_00441 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445658|gb|EDP22661.1| hypothetical protein FAEPRAM212_00441 [Faecalibacterium prausnitzii
           M21/2]
          Length = 447

 Score = 51.6 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 52/170 (30%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156
             H C  +C FCF  ++    + ++    D E        YI                  
Sbjct: 84  AKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 129

Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           +    + +++K      H+  +    H+     +PQ      ++ L              
Sbjct: 130 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 166

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
                  E +  + RL   GI +  Q VL +G+ND       L RT  +L
Sbjct: 167 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGVNDG----DELRRTLADL 207


>gi|327398341|ref|YP_004339210.1| MiaB-like tRNA modifying enzyme [Hippea maritima DSM 10411]
 gi|327180970|gb|AEA33151.1| MiaB-like tRNA modifying enzyme [Hippea maritima DSM 10411]
          Length = 410

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 63/140 (45%), Gaps = 15/140 (10%)

Query: 76  DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           D   +    PL+ I+ +Y    R  +K+   C  +C +C    + G ++      K+ + 
Sbjct: 107 DISDETKTYPLERILSQYRGKSRAFVKIQEGCNNHCTYCIISFLRGRERD-----KEKDK 161

Query: 134 ALAYIQ--EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
            L+ I+   K+   E++ TG +  I S++ L+ +L+ +  ++    +R  S    ++P  
Sbjct: 162 VLSEIESLAKAGFSEIVLTGTN--IGSYRDLKGLLRDIDALEGDFRVRISS----IEPMY 215

Query: 192 INPELIQCLKEAGKPVYIAI 211
           ++ E I  +       ++ I
Sbjct: 216 VDKEFIDIVASGRFANHLHI 235


>gi|329942587|ref|ZP_08291397.1| RNA modification enzyme, MiaB family protein [Chlamydophila
           psittaci Cal10]
 gi|332287217|ref|YP_004422118.1| MiaB-like tRNA modifying enzyme [Chlamydophila psittaci 6BC]
 gi|313847811|emb|CBY16802.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
 gi|325506891|gb|ADZ18529.1| MiaB-like tRNA modifying enzyme [Chlamydophila psittaci 6BC]
 gi|328815497|gb|EGF85485.1| RNA modification enzyme, MiaB family protein [Chlamydophila
           psittaci Cal10]
 gi|328914465|gb|AEB55298.1| MiaB-like tRNA modifying enzyme [Chlamydophila psittaci 6BC]
          Length = 422

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 66/192 (34%), Gaps = 39/192 (20%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  +K+   C  +C +C    + G  +     S+  +  L  I         EV+  G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSR-----SRPVQEILEEISGLVTQGYREVVIAG 188

Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
            +        K L  ++  +  I  ++ +R  S    +DP+ +  +L   L  +GK    
Sbjct: 189 INVGDYQDQGKSLAYLISQVDEIPGIERIRISS----IDPEDVQDDLRDILL-SGKHTC- 242

Query: 210 AIHANH--PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
             H++H      S   +  ++R  + G  L           D  + L +         + 
Sbjct: 243 --HSSHLVLQSGSNAILKRMNRKYSRGDFL-----------DCVDALRS---------VD 280

Query: 268 PYYLHHPDLAAG 279
           P Y    D+  G
Sbjct: 281 PQYAFTTDVIVG 292


>gi|225418715|ref|ZP_03761904.1| hypothetical protein CLOSTASPAR_05939 [Clostridium asparagiforme
           DSM 15981]
 gi|225041770|gb|EEG52016.1| hypothetical protein CLOSTASPAR_05939 [Clostridium asparagiforme
           DSM 15981]
          Length = 486

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 69/189 (36%), Gaps = 43/189 (22%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+           Y ++      + F  G+ + L
Sbjct: 96  LMSDYRSCSNKCIFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITL 142

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           ++ + + +          +I+R       +  Q  NPEL  + L           H    
Sbjct: 143 TNMKERDI---------ERIIRMQLAPINISVQTTNPELRCKML-----------H---- 178

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHHPD 275
             F+ E +  +  L +  + +  Q V  KG+ND  E    L+RT  +     P+      
Sbjct: 179 NRFAGETLKYMRMLYDGHVEMNGQVVCCKGVNDGAE----LVRTLDDLAGFLPFLRSVSV 234

Query: 276 LAAGTSHFR 284
           + AG + +R
Sbjct: 235 VPAGITKYR 243


>gi|77464115|ref|YP_353619.1| NifB family--FeMo cofactor biosynthesis protein [Rhodobacter
           sphaeroides 2.4.1]
 gi|77388533|gb|ABA79718.1| NifB family--FeMo cofactor biosynthesis protein [Rhodobacter
           sphaeroides 2.4.1]
          Length = 491

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 76/241 (31%), Gaps = 57/241 (23%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H Y  R+ + +   C + C +C R+         G     +   +     LA   E  Q
Sbjct: 58  AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117

Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174
           +  +   G GD                  L   +L             ++++     I H
Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDKVQSQLPDIKLCLSSNGLAMPDHVEEIVA--MNIDH 175

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           V  L  ++  P V   +I P +    +                +       A+  L   G
Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGKRHEGVEGAAILLARQM-----EALDMLVARG 226

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289
           +++   SVL+ GIND    +  L R           I P      D A GT HF LT + 
Sbjct: 227 VLVKVNSVLIPGIND--AGMVELNREVKARGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280

Query: 290 G 290
           G
Sbjct: 281 G 281


>gi|269303354|gb|ACZ33454.1| RNA modification enzyme, MiaB family [Chlamydophila pneumoniae
           LPCoLN]
          Length = 421

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  +K+   C  +C +C    + G            E  LA I         EV+  G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPA-----EKILAEIAGVVDQGYREVVIAG 188

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
              GD      + L  +++ +  I  ++ +R  S    +DP  I  +L + +  +   
Sbjct: 189 INVGD-YCDGERSLASLIEQVDQIPGIERIRISS----IDPDDITEDLHRAITSSRHT 241


>gi|261367336|ref|ZP_05980219.1| PDZ domain protein [Subdoligranulum variabile DSM 15176]
 gi|282570095|gb|EFB75630.1| PDZ domain protein [Subdoligranulum variabile DSM 15176]
          Length = 445

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 39/165 (23%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
            H C  +C FCF  ++    +  +    D E           +            LS + 
Sbjct: 83  KHSCANHCMFCFIDQLPPGMREPLYFKDDDERLSFLFGNYITLT----------NLSDRE 132

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANHPYEFS 220
           + ++++   +I  +  +  H+     +PQ RI     + L                    
Sbjct: 133 IDRIIE--MHISPI-FVSVHT----TNPQLRI-----RMLANKR---------------G 165

Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
            E +A + RLA  G+ L  Q VL +GIND  + L   +   + LR
Sbjct: 166 GEVLAYLPRLAAGGVELNCQLVLCRGIND-GDELRRTLDDLLALR 209


>gi|15836008|ref|NP_300532.1| hypothetical protein CPj0477 [Chlamydophila pneumoniae J138]
 gi|16752565|ref|NP_444827.1| hypothetical protein CP0277 [Chlamydophila pneumoniae AR39]
 gi|33241829|ref|NP_876770.1| hypothetical protein CpB0496 [Chlamydophila pneumoniae TW-183]
 gi|14916790|sp|Q9Z874|Y477_CHLPN RecName: Full=Putative methylthiotransferase
           CPn_0477/CP_0277/CPj0477/CpB0496
 gi|7189201|gb|AAF38135.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39]
 gi|8978847|dbj|BAA98683.1| hypothetical protein [Chlamydophila pneumoniae J138]
 gi|33236338|gb|AAP98427.1| hypothetical protein CpB0496 [Chlamydophila pneumoniae TW-183]
          Length = 421

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  +K+   C  +C +C    + G            E  LA I         EV+  G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPA-----EKILAEIAGVVDQGYREVVIAG 188

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
              GD      + L  +++ +  I  ++ +R  S    +DP  I  +L + +  +   
Sbjct: 189 INVGD-YCDGERSLASLIEQVDQIPGIERIRISS----IDPDDITEDLHRAITSSRHT 241


>gi|213965848|ref|ZP_03394039.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III
           oxidase [Corynebacterium amycolatum SK46]
 gi|213951426|gb|EEB62817.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III
           oxidase [Corynebacterium amycolatum SK46]
          Length = 401

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 47/220 (21%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           + P  ++ ++   C + C+ C R +         LS+ + +  L  +   S+    V+ T
Sbjct: 11  KKPFIVIWEVTRACGLVCKHC-RADAQHEPHPLQLSTAEGKVLLETLASYSKPKPLVVLT 69

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCLKEA 203
           GGDP       L+++            +RF +         P V P R+ PE I+ L+EA
Sbjct: 70  GGDPF--ERDDLEEL------------VRFGTEHGLNMSLSPSVTP-RLTPERIKSLREA 114

Query: 204 -GKPVYI----AIHANHP--YEFSEEAIAAISR---LANAGIILLSQSVLLKGINDDPEI 253
            GK + +    A    H     FS      +     +  AG  L   S L KG   +   
Sbjct: 115 GGKAMSMSLDGATAQTHDKFRGFSGTFEKTLKMAPHINEAGYRLQINSTLTKG---NIHE 171

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
              L++T +E++ K +Y+           F +    G  +
Sbjct: 172 APALLKTVMEMQAKMWYVF----------FLVPTGRGADL 201


>gi|315651882|ref|ZP_07904885.1| PDZ domain protein [Eubacterium saburreum DSM 3986]
 gi|315485884|gb|EFU76263.1| PDZ domain protein [Eubacterium saburreum DSM 3986]
          Length = 456

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 73/207 (35%), Gaps = 50/207 (24%)

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P  EE  +  E   D IG       +G++  Y           C   C FCF  +M    
Sbjct: 56  PNGEEWELDIESDYDDIGLEFD---EGLMSDYK---------SCTNNCIFCFIDQMPQGM 103

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRF 180
           + T+    D ++ L+++Q       V  T      +  + + ++++  L  I     +  
Sbjct: 104 RETLYFKDD-DSRLSFLQGN----YVTLT-----NMKDEDIDRIIRFNLAPI----NISV 149

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
           H+     +P+         L++        +H      F+ E++  I +L    + +  Q
Sbjct: 150 HT----TNPE---------LRKK------MLH----NRFAGESLKYIDKLYEKNVPMNGQ 186

Query: 241 SVLLKGINDDPEILANLMRTFVELRIK 267
            V+  G ND  E+   L        + 
Sbjct: 187 VVMCPGYNDGEELRRTLNDLLKYAPVM 213


>gi|288940317|ref|YP_003442557.1| molybdenum cofactor biosynthesis protein A [Allochromatium vinosum
           DSM 180]
 gi|288895689|gb|ADC61525.1| molybdenum cofactor biosynthesis protein A [Allochromatium vinosum
           DSM 180]
          Length = 328

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 66/162 (40%), Gaps = 19/162 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C  +   G ++    LS ++ E  +A       +  V  TGG+PL+ 
Sbjct: 19  LSVTDRCDLRCGYCLPKGFKGFEEPAHWLSFEEIERVVAAFTA-LGVRRVRLTGGEPLM- 76

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
             + L ++   L  +  +  L   S             L   L  AG + + +++ + +P
Sbjct: 77  -RRGLTELAARLSALPGLDDLSLSSNA------TQLESLAGPLARAGVRRLNVSLDSLNP 129

Query: 217 ---YEFS----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
               + +    E     I+    AG+  +   +V+++G+ND 
Sbjct: 130 EVFRQITGGDLERVRRGIAAAREAGMEPIRVNTVVMRGVNDT 171


>gi|295100401|emb|CBK97946.1| Fe-S oxidoreductase, related to NifB/MoaA family [Faecalibacterium
           prausnitzii L2-6]
          Length = 443

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 54/170 (31%), Gaps = 52/170 (30%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156
             H C  +C FCF  ++    + ++    D E        YI                  
Sbjct: 82  QKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 127

Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           +    + +++K      H+  +    H+     +PQ      ++ L              
Sbjct: 128 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 164

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
                  E +  + RL   GI +  Q VL +GIND       L RT  +L
Sbjct: 165 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGINDG----DELRRTLTDL 205


>gi|126462958|ref|YP_001044072.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
           sphaeroides ATCC 17029]
 gi|126104622|gb|ABN77300.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 491

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 76/241 (31%), Gaps = 57/241 (23%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H Y  R+ + +   C + C +C R+         G     +   +     LA   E  Q
Sbjct: 58  AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117

Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174
           +  +   G GD                  L   +L             ++++     I H
Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDKVQSQLPDIKLCLSSNGLAMPDHVEEIVA--MNIDH 175

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           V  L  ++  P V   +I P +    +                +       A+  L   G
Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGKRHEGVEGAAILLARQM-----EALDMLVARG 226

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289
           +++   SVL+ GIND    +  L R           I P      D A GT HF LT + 
Sbjct: 227 VLVKVNSVLIPGIND--AGMVELNREVKARGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280

Query: 290 G 290
           G
Sbjct: 281 G 281


>gi|315302537|ref|ZP_07873372.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL
           F6-596]
 gi|313629099|gb|EFR97397.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL
           F6-596]
          Length = 333

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +    +  I  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVGFME-IMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +   AG   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEAGLFPIKLNVVLIKGQNDD 170


>gi|332558991|ref|ZP_08413313.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
           sphaeroides WS8N]
 gi|332276703|gb|EGJ22018.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
           sphaeroides WS8N]
          Length = 491

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 76/241 (31%), Gaps = 57/241 (23%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H Y  R+ + +   C + C +C R+         G     +   +     LA   E  Q
Sbjct: 58  AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117

Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174
           +  +   G GD                  L   +L             ++++     I H
Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDKVQSQLPDIKLCLSSNGLAMPDHVEEIVA--MNIDH 175

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           V  L  ++  P V   +I P +    +                +       A+  L   G
Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGKRHEGVEGAAILLARQM-----EALDMLVARG 226

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289
           +++   SVL+ GIND    +  L R           I P      D A GT HF LT + 
Sbjct: 227 VLVKVNSVLIPGIND--AGMVELNREVKARGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280

Query: 290 G 290
           G
Sbjct: 281 G 281


>gi|163813999|ref|ZP_02205392.1| hypothetical protein COPEUT_00151 [Coprococcus eutactus ATCC 27759]
 gi|158450693|gb|EDP27688.1| hypothetical protein COPEUT_00151 [Coprococcus eutactus ATCC 27759]
          Length = 442

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 38/162 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +     + T+    D ++ L+++Q       +  T      +
Sbjct: 80  LMDNYKSCYNKCIFCFIDQNPKGMRDTIYFKDD-DSRLSFLQGN----YITLT-----NM 129

Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
             + + +++   L  I     +  H+     +PQ         L                
Sbjct: 130 KDEDIDRIINYHLAPI----NISVHT----TNPQL----RCSMLN--------------- 162

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
             F+   +  I +  NAGI +  Q VL KGIND  E+  ++ 
Sbjct: 163 NRFAGTILERIRKFYNAGIPMNGQIVLCKGINDGEELWRSIS 204


>gi|154687786|ref|YP_001422947.1| molybdenum cofactor biosynthesis protein A [Bacillus
           amyloliquefaciens FZB42]
 gi|166217238|sp|A7Z9P0|MOAA_BACA2 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|154353637|gb|ABS75716.1| MoaA [Bacillus amyloliquefaciens FZB42]
          Length = 341

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 25/166 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C   E+ G       K  +LS ++ E        +  + ++  TGG+
Sbjct: 21  ISVTDRCNFRCTYCMPAELFGPDYPFLQKTELLSFEELERLAKLFVGRFGVEKIRLTGGE 80

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIV---DPQ----RINPELIQCLKEA 203
           PL+     + +++K L  I  ++ +      S +P+      Q    R+   L     E 
Sbjct: 81  PLMRKD--MPELIKKLARIPGLKDIAMTTNGSLLPVYAEKLKQAGLHRVTVSLDSLEDER 138

Query: 204 GKPVY-IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
            K +    +  N       + +  I     AG+ +    V+ KG+N
Sbjct: 139 FKAINGRGVSVN-------KVLEGIEAAKAAGLGVKINMVVQKGVN 177


>gi|153816158|ref|ZP_01968826.1| hypothetical protein RUMTOR_02406 [Ruminococcus torques ATCC 27756]
 gi|317500478|ref|ZP_07958702.1| PDZ domain-containing protein [Lachnospiraceae bacterium 8_1_57FAA]
 gi|331089421|ref|ZP_08338320.1| hypothetical protein HMPREF1025_01903 [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145846493|gb|EDK23411.1| hypothetical protein RUMTOR_02406 [Ruminococcus torques ATCC 27756]
 gi|316898233|gb|EFV20280.1| PDZ domain-containing protein [Lachnospiraceae bacterium 8_1_57FAA]
 gi|330404789|gb|EGG84327.1| hypothetical protein HMPREF1025_01903 [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 452

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 41/188 (21%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       V  T      +
Sbjct: 85  LMDEYRSCRNKCMFCFIDQMPEGMRDTLYFKDD-DSRLSFLQGN----YVTLT-----NM 134

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           S   ++            +I+R+      +  Q  NP+L  + L           H    
Sbjct: 135 SDHDIE------------RIIRYRLEPINISFQTTNPQLRCKML-----------H---- 167

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             F+ +A+  + RL   GI +  Q VL KG ND  E+  ++ +        P       +
Sbjct: 168 NRFAGDALKKVDRLFEGGIEMNGQIVLCKGENDGAELERSI-KDLTA--YIPLLRSVSVV 224

Query: 277 AAGTSHFR 284
             G + FR
Sbjct: 225 PVGLTKFR 232


>gi|242280341|ref|YP_002992470.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
           salexigens DSM 2638]
 gi|259495863|sp|C6C060|MOAA_DESAD RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|242123235|gb|ACS80931.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
           salexigens DSM 2638]
          Length = 330

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/253 (15%), Positives = 88/253 (34%), Gaps = 43/253 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C + C +C  ++        +L  ++    +  +     I ++  TGG+P    
Sbjct: 16  LSVTDRCNLRCMYCVTKDFKHIPHPDILRYEEMLRLVD-LAASMNISKLRLTGGEPF-AR 73

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI----HAN 214
              +  + + +     +  LR  +   +++P  + PEL + +  +   + +         
Sbjct: 74  KGFMDFISQVMDSHPEID-LRITTNGTLIEP--LVPEL-KKIGVSRLNISLDTLDRETF- 128

Query: 215 HPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDP-----EILANLMRTFVEL 264
              E +      + +A IS   +AGI +   +V +KGIND       +           +
Sbjct: 129 --KEVTGRDHLTDVLATISACLSAGIRVKVNAVAMKGINDRELNSFIDFARENPIDMRFI 186

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ--------PFYILDLPGG 316
              P      D     S F         I+   +E ++ +          P  +  + GG
Sbjct: 187 EFMP----MGDDTKSDSRFW----SADDILEQGREYVNLIPVKRTAENRGPARMYSIEGG 238

Query: 317 YGKV----KIDTH 325
            G++     + +H
Sbjct: 239 KGRLGLISPVSSH 251


>gi|229917634|ref|YP_002886280.1| molybdenum cofactor biosynthesis protein A [Exiguobacterium sp.
           AT1b]
 gi|229469063|gb|ACQ70835.1| molybdenum cofactor biosynthesis protein A [Exiguobacterium sp.
           AT1b]
          Length = 335

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 9/85 (10%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   CR+C     FR      ++  +LS  + E  +  I     + +V  TGG+
Sbjct: 17  ISVIDKCNFRCRYCMPEEAFRHHQF-LKRDELLSFDEIERFVRIIAPH-GVKKVRLTGGE 74

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+  +  L ++++ LR +  ++ +
Sbjct: 75  PLLRPN--LDELIRRLRAVTTIETI 97


>gi|256395785|ref|YP_003117349.1| hopanoid biosynthesis associated radical SAM protein HpnH
           [Catenulispora acidiphila DSM 44928]
 gi|256362011|gb|ACU75508.1| hopanoid biosynthesis associated radical SAM protein HpnH
           [Catenulispora acidiphila DSM 44928]
          Length = 334

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 87/222 (39%), Gaps = 36/222 (16%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           ++P  + L+ L  C + C  C + +        +      E ALA ++E      V   G
Sbjct: 25  KFPLLVELEPLFACNLACAGCGKIQHP---ADVLKKRMPVEQALAAMRECGAPM-VSIAG 80

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+PL+    ++ +++  L  +K  + +   +   ++      P+ +   K +    ++  
Sbjct: 81  GEPLMHP--QIGELVDELVKMK--RYVFLCTNALLI------PKKLDRFKPSRYFTWVV- 129

Query: 212 HANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDDP----EILANL 257
           H +   E            +EA+AA+  L   G  + + + +     D P    +IL  L
Sbjct: 130 HLDGLRERHDESVCKEGVFDEAVAAVRELRRRGFRVTTNTTIFDT--DSPQDVIDILDYL 187

Query: 258 MRTFV--ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
                  ++ I P Y +  + A    HF L +++ +++    
Sbjct: 188 NDDLRVDQMMISPGYAY--EKAPDQQHF-LPVKQTRELFHKA 226


>gi|226355448|ref|YP_002785188.1| molybdenum cofactor biosynthesis protein A [Deinococcus deserti
           VCD115]
 gi|226317438|gb|ACO45434.1| putative molybdenum cofactor biosynthesis protein A [Deinococcus
           deserti VCD115]
          Length = 337

 Score = 51.3 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 34/183 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C + C +C    + G       +  +LS ++ E           + ++  TGG+
Sbjct: 19  ISVTDRCNLRCTYCMPASVFGPDYAFVPRSELLSFEEIERLTRLFLI-LGVRKLRLTGGE 77

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           P +     L  ++  L  ++ V+ L   +         + P L + LK AG         
Sbjct: 78  PTLRRD--LSDLIARLARLEGVEDLAMTTNGL------LLPRLARELKSAGLRRVTVSLD 129

Query: 212 --------HAN----HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
                     N    HP +  +   AA+     AG+ +   +V+ +G+ND  + L  L  
Sbjct: 130 SLDPDVFGQMNGLGVHPQQVLDGIEAALQ----AGLGVKINTVVQRGVND--QGLRELWL 183

Query: 260 TFV 262
              
Sbjct: 184 ALR 186


>gi|268609957|ref|ZP_06143684.1| MiaB-like tRNA modifying enzyme YliG [Ruminococcus flavefaciens
           FD-1]
          Length = 443

 Score = 50.9 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 13/125 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-PLIL 157
           LK+   C   C +C    + G  K   +  +D      ++ E   + E++    D  L  
Sbjct: 149 LKVAEGCSNCCTYCAIPLIRG--KFRSVPMEDVLKEARFLAEN-GVTELVVIAQDTALYG 205

Query: 158 SH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIH 212
                  +L ++L  L  I  ++ +R         P+RI  EL+  +    K V Y+ I 
Sbjct: 206 KDLYGEPKLAELLTELCRIDGLKWIR----TLYCYPERITDELLDVIAREDKIVKYMEIP 261

Query: 213 ANHPY 217
             H  
Sbjct: 262 IQHCN 266


>gi|146303295|ref|YP_001190611.1| radical SAM domain-containing protein [Metallosphaera sedula DSM
           5348]
 gi|145701545|gb|ABP94687.1| Radical SAM domain protein [Metallosphaera sedula DSM 5348]
          Length = 347

 Score = 50.9 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 41/283 (14%), Positives = 99/283 (34%), Gaps = 47/283 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++L+    C + C+ C  + +     G  L++++ ++ +  +   S +   + +GGD
Sbjct: 4   PYVVVLESTKACDLACKHCRAKAIPNRLPGE-LTTEEVKSLVDDLAS-SGVKLFVISGGD 61

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
            L      + ++L+        +I    +        RIN E+ + +K+ G  + ++I  
Sbjct: 62  AL--KRDDIFEILEY----SSAKI----TTALSPSGSRINVEVAKRIKDTGVSM-VSISV 110

Query: 214 NHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
           + P E  +E          A  A+  L    + +   S + +   D  + L   +     
Sbjct: 111 DGPEEIHDEFRGVRGAFKMAKQAVDSLHEVKLPVQINSTISRYNVDHLQELRKTVEAL-- 168

Query: 264 LRIKPYY--LHHPDLA-AGTSHFRLTIEEGQKIVASL-KEKISGLCQ-----PFYILDLP 314
              +P Y  +         T    +T E+ ++++ ++ K ++ GL       P+ +  + 
Sbjct: 169 ---RPVYWDVFMLIPTGRATKEMMITSEQAEEVMRTITKWRMEGLNVRMTCAPYLVRVMN 225

Query: 315 GGYGKVKIDTHNIKKV----------GNGSYCITDHHNIVHDY 347
                  +                      Y    +   V+  
Sbjct: 226 EMGVVRPLPPDKNYGRRSVNGARGCMAGNGYAFVAYDGTVYPC 268


>gi|115372589|ref|ZP_01459896.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|310823867|ref|YP_003956225.1| radical sam domain-containing protein [Stigmatella aurantiaca
           DW4/3-1]
 gi|115370310|gb|EAU69238.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|309396939|gb|ADO74398.1| Radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 290

 Score = 50.9 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 12/139 (8%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
            +   ++  C   C +C ++ M G    T    +  EAAL  +      WE   +GG+P 
Sbjct: 7   TVSWNIVGGCNYRCTYCVQKHMPGIGGPT---DEQLEAALTTLTALPGSWEFKISGGEPF 63

Query: 156 ILSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           +L  KRL +V K L    H V +L       +  P R+    I+   E  +    ++H  
Sbjct: 64  LL--KRLPEVAKRLATAGHKVSLL-----TNLSAPLRVLATFIEAAGEQLRTFSCSLHRE 116

Query: 215 HPYEFSE-EAIAAISRLAN 232
              E +  E   A+  L  
Sbjct: 117 EVEEAAFLEKAQAVQALLA 135


>gi|160895345|ref|ZP_02076116.1| hypothetical protein CLOL250_02904 [Clostridium sp. L2-50]
 gi|156863038|gb|EDO56469.1| hypothetical protein CLOL250_02904 [Clostridium sp. L2-50]
          Length = 439

 Score = 50.9 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/155 (16%), Positives = 57/155 (36%), Gaps = 25/155 (16%)

Query: 69  ILPEEREDPIGDNNHSPLK---GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           +  E   D   +  + PL     + H    R  +K+   C  +C +C     +       
Sbjct: 120 VTDEGMLDISAEKEYEPLTINSTLEH---TRAYVKIQDGCNQFCSYC-----IIPYVRGR 171

Query: 126 LSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQIL 178
           + S+D  + +  ++    + + E++ TG         +     L  V+  +  I+ ++ +
Sbjct: 172 IRSRDIASIIEEVERLALTGVKEIVLTGIHISSYGKDKENEVGLADVIDAISKIESIKRI 231

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           R  S    ++P  I  E I  + +  K   +  H 
Sbjct: 232 RLGS----LEPSIITDEFIDRIVDNEK---VCPHF 259


>gi|289671287|ref|ZP_06492362.1| hypothetical protein XcampmN_23115 [Xanthomonas campestris pv.
          musacearum NCPPB4381]
          Length = 78

 Score = 50.9 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/69 (13%), Positives = 24/69 (34%)

Query: 8  LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67
          +   + L     +  +        +  + + +       +   + +DP+ RQ +P   E+
Sbjct: 1  MRDPRVLLEQLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVLPLDAEM 60

Query: 68 NILPEERED 76
            +P    D
Sbjct: 61 QPVPGFGLD 69


>gi|110596760|ref|ZP_01385050.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium
           ferrooxidans DSM 13031]
 gi|110341447|gb|EAT59907.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium
           ferrooxidans DSM 13031]
          Length = 424

 Score = 50.9 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 79/218 (36%), Gaps = 50/218 (22%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE----KSQI 144
           H++  RI L +   C + C +C R+    ++    ++SK    + A+ Y+ +       I
Sbjct: 17  HKF-GRIHLPIAPKCNIQCNYCNRKFDCMNENRPGVTSKILSPQQAMHYLDQAMILSPNI 75

Query: 145 WEVIFTG-GDPLILSHKRLQK------------------------VLKTLRY--IKHVQI 177
             V   G GDP    ++ ++                          +  L    + HV  
Sbjct: 76  AVVGIAGPGDPFANPNETMETLRLVRAKYPEMLLCVATNGLDLLPYIDELAELQVSHV-T 134

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +  +     +DP+ I  E+   ++   K +Y     +         + A+ RL  AG+  
Sbjct: 135 ITIN----AIDPE-IGSEIYAWVR-YNKKMYRD--IDAARVLIGNQLEALKRLKEAGVTA 186

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELR-----IKPYY 270
              S+++ GIND   I     R   EL        PYY
Sbjct: 187 KVNSIIIPGINDTHVIEVA--RKVAELGADILNCMPYY 222


>gi|221639981|ref|YP_002526243.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
           sphaeroides KD131]
 gi|221160762|gb|ACM01742.1| Nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
           sphaeroides KD131]
          Length = 491

 Score = 50.9 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 48/241 (19%), Positives = 76/241 (31%), Gaps = 57/241 (23%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H Y  R+ + +   C + C +C R+         G     +   +     LA   E  Q
Sbjct: 58  AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117

Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174
           +  +   G GD                  L   +L             ++++     I H
Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDRVQSQLPDIKLCLSSNGLAMPDHVEEIVA--MNIDH 175

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           V  L  ++  P V   +I P +    +                +       A+  L   G
Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGKRHEGVEGAAILLARQM-----EALDMLVARG 226

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289
           +++   SVL+ GIND    +  L R           I P      D A GT HF LT + 
Sbjct: 227 VLVKVNSVLIPGIND--AGMVELNREVKARGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280

Query: 290 G 290
           G
Sbjct: 281 G 281


>gi|134300331|ref|YP_001113827.1| RNA modification protein [Desulfotomaculum reducens MI-1]
 gi|134053031|gb|ABO51002.1| RNA modification enzyme, MiaB family [Desulfotomaculum reducens
           MI-1]
          Length = 436

 Score = 50.9 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 18/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCF--------RREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
             R  LK+   C  +C +C         R  +   +     + +  +     I       
Sbjct: 143 KTRAFLKIQEGCNSFCAYCIIPYARGPVRSRLP--ENVLSSAEELIQQGFQEIVLTG--I 198

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            +   G D        L  +++ L  +  +  LR  S    V+P  IN  LI+ + E   
Sbjct: 199 HIGAYGQD-FTGKDIDLGWLVERLAKLPGLTRLRLGS----VEPHDINNALIKAVSEHP- 252

Query: 206 PVYIAIHA 213
            V   +H 
Sbjct: 253 NVCRHLHI 260


>gi|308176262|ref|YP_003915668.1| molybdenum cofactor biosynthesis protein A [Arthrobacter
           arilaitensis Re117]
 gi|307743725|emb|CBT74697.1| molybdenum cofactor biosynthesis protein A [Arthrobacter
           arilaitensis Re117]
          Length = 346

 Score = 50.9 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 69/172 (40%), Gaps = 29/172 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G      ++  +LS ++ E  LA I     + ++  TGG+
Sbjct: 22  ISVTDRCNFRCVYCMPKEIFGRDFQFRERSELLSFEEIER-LARISVSLGVTKLRLTGGE 80

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF-------HSRVPIVDPQ-------RINPELIQC 199
           PL+   + +  ++  L  ++  +  R         S +P++ P        R+   L   
Sbjct: 81  PLL--RRGIVDLVAMLSNLRTPEGKRIDLAMTTNGSALPVLAPALKEAGLNRVTISLDSL 138

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
             E  K +      N P     + + AI      G+  +   +V+ +G+ND 
Sbjct: 139 DDEKFKAINDV---NFPVS---KVLEAIQVAREVGLGPVKINTVIKRGVNDS 184


>gi|325108721|ref|YP_004269789.1| 23S rRNA m(2)A-2503 methyltransferase [Planctomyces brasiliensis
           DSM 5305]
 gi|324968989|gb|ADY59767.1| 23S rRNA m(2)A-2503 methyltransferase [Planctomyces brasiliensis
           DSM 5305]
          Length = 358

 Score = 50.9 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 71/207 (34%), Gaps = 49/207 (23%)

Query: 86  LKGIVHRYPDRILLKLLHV--CPVYCRFC-------FRREMVGSQKGTVLSSKDTEAALA 136
           ++ ++ R PDR  + +     C + C FC        R          V      +    
Sbjct: 94  VECVLMREPDRNTICISTQVGCGMGCVFCASGLAGLTRNLQTAEILEQVARLDRLQ---- 149

Query: 137 YIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVD 188
              +  ++  V+  G G+PL      L+++L  L  ++H       V+ +   +   +  
Sbjct: 150 --SDDEKLTNVVVMGMGEPL----ANLKQLLPALERMQHALGLNLGVRRITVST---VGL 200

Query: 189 PQRINPELIQCLKEAGKP--VYIAIH------------ANHPYEFSEEAIAAISRLANAG 234
           P RI     + L   GKP  + +++H             N          AA       G
Sbjct: 201 PDRI-----RQLAAHGKPYNLAVSLHAPNDKLRDEIVPVNDKIGLDAVLSAADEYFETTG 255

Query: 235 IILLSQSVLLKGINDDPEILANLMRTF 261
             +  + VLLKGIND  E    L    
Sbjct: 256 RRVTYEYVLLKGINDSLEHAHELAEVL 282


>gi|223985672|ref|ZP_03635720.1| hypothetical protein HOLDEFILI_03026 [Holdemania filiformis DSM
           12042]
 gi|223962363|gb|EEF66827.1| hypothetical protein HOLDEFILI_03026 [Holdemania filiformis DSM
           12042]
          Length = 439

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 8/135 (5%)

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
            +    PL    H    R  LK+   C  +C +C      G ++   L  +  + A    
Sbjct: 136 AEFEMLPLDEFEH--QTRAYLKVQDGCNQFCAYCIIPYARGRERSLPL-DEALKEARRLA 192

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           Q+  +I       G         L  +++ +  I+ ++ +R  S + I +   I  EL+ 
Sbjct: 193 QKHKEIVLAGIHTGRYGKDRDTSLCDLIRGMCEIEPLERIRI-SSIEITE---ITDELL- 247

Query: 199 CLKEAGKPVYIAIHA 213
            L E    +   +H 
Sbjct: 248 TLMETQPKIARHLHI 262


>gi|294782589|ref|ZP_06747915.1| Fe-S oxidoreductase [Fusobacterium sp. 1_1_41FAA]
 gi|294481230|gb|EFG29005.1| Fe-S oxidoreductase [Fusobacterium sp. 1_1_41FAA]
          Length = 439

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 17/141 (12%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            R  +K+   C  +C +C         K      ++    +  + E     EVI  G D 
Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGID- 201

Query: 155 LIL------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           L             + +L+ +  IK ++ +R  S    V P +I+ + I   K   K + 
Sbjct: 202 LSAYGEDFEKKDSFESLLEDILKIKDLKRVRIGS----VYPDKISDKFIDLFK--NKNLM 255

Query: 209 IAIHANHPYEFSEEAIAAISR 229
             +H +      +  +  + R
Sbjct: 256 PHLHIS-LQSCDDTVLKNMRR 275


>gi|147678958|ref|YP_001213173.1| molybdenum cofactor biosynthesis enzyme [Pelotomaculum
           thermopropionicum SI]
 gi|189028691|sp|A5CYZ0|MOAA_PELTS RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|146275055|dbj|BAF60804.1| molybdenum cofactor biosynthesis enzyme [Pelotomaculum
           thermopropionicum SI]
          Length = 325

 Score = 50.5 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 47/259 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E V S   G +L  ++ E  +      + + ++  TGG+PL+ 
Sbjct: 14  ISVTDRCNLRCVYCMPEEGVRSLPHGEILRLEEIETVVRA-AALTGVKKIRLTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
             K L+++++ +  I  +  +   +   +  P R      + LKEAG K V +++     
Sbjct: 72  -RKGLEELVRRVSGIPGIDDIALTTNGLL-LPSR-----AKALKEAGVKRVNVSLDTLRA 124

Query: 217 Y---EFS-----EEAIAAISRLANAGI-ILLSQSVLLKGIN-DDPEILANLMRTFVELRI 266
               E +       A   I    +AG+  +   +V+++G N D+   +A L         
Sbjct: 125 DRYAEITRGGNLAGAWEGIQSALDAGLHPVKLNTVIIRGFNEDEVVAMAMLTIN------ 178

Query: 267 KPYYLHH----PDLAAGTSHFR----LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318
           +P  LH           +S +     +      +++ ++  K+ G   P       GG  
Sbjct: 179 RP--LHVRFIELMPIGSSSSWAAGRYVP---AAEVMDAISAKL-GPLVPARQP-AGGGPA 231

Query: 319 KVKIDTHNIKKVGNGSYCI 337
           K     +   K   G+   
Sbjct: 232 K-----YYRLKDAAGTVGF 245


>gi|197302998|ref|ZP_03168046.1| hypothetical protein RUMLAC_01724 [Ruminococcus lactaris ATCC
           29176]
 gi|197297853|gb|EDY32405.1| hypothetical protein RUMLAC_01724 [Ruminococcus lactaris ATCC
           29176]
          Length = 456

 Score = 50.5 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 65/172 (37%), Gaps = 41/172 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+   H C   C FCF  +M    + T+    D ++ L+++Q       +  T      +
Sbjct: 83  LMDEYHSCHNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 132

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           S K ++            +I+R+      +  Q  NPEL  + L           H    
Sbjct: 133 SDKDVE------------RIVRYRLEPINISFQTTNPELRCKML-----------H---- 165

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
             F+ EA+  +  L   GI +  Q VL KG+ND  E+  ++          P
Sbjct: 166 NRFAGEALKKVDILYQGGIEMNGQIVLCKGVNDGEELERSIRDL---TGYLP 214


>gi|114566232|ref|YP_753386.1| radical SAM protein [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337167|gb|ABI68015.1| radical SAM domain protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 333

 Score = 50.5 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 36/215 (16%), Positives = 77/215 (35%), Gaps = 39/215 (18%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C ++C  C+R    G++    LS++  +  +  I++ +    +IF+GG+PL+
Sbjct: 3   VSWNTTNQCNMFCDHCYRDA--GARLEDELSTEQAKKLIEEIKK-AGFRIMIFSGGEPLM 59

Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVY------ 208
                 L +              R   RV +  +   I+PE+ Q LK+AG          
Sbjct: 60  RPDIFELGQYAT-----------RQGLRVVMGTNGSLISPEVAQKLKKAGFMAAGVSLDS 108

Query: 209 IAIHANHP-YEFSEEA---IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
           +    N+   +           +  L +AG+     + ++     + + L  +    +E+
Sbjct: 109 LNPAKNNAFRKLDNAFQLTCEGMQNLKDAGLPFQVHTTVMDW---NVDELEAICDFAIEI 165

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
               Y++           F +    G  I      
Sbjct: 166 GAMAYHVF----------FLVPTGRGADIEEEALR 190


>gi|116749858|ref|YP_846545.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116698922|gb|ABK18110.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 347

 Score = 50.5 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 75/206 (36%), Gaps = 37/206 (17%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFT 150
           +P  +  +L   C + CR C       S      +    + ALA   +     + EV+FT
Sbjct: 8   FPVLVGWELTLACNLRCRHC-----ASSAGEARSNELTLDEALAICDQLPPLLVLEVVFT 62

Query: 151 GGDPLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           GG+PL+      + + + LR +  HV ++   +         I  E+++ L+ AG    +
Sbjct: 63  GGEPLLSP--HWEAIARRLRELGIHVGVVTNGT--------LITDEMLERLRGAGIT-AM 111

Query: 210 AIHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLM 258
           A+  +   E            +  +  I R   AG  +   +V+   +N      L+ ++
Sbjct: 112 AVSMDGLSETHDFIRGVPGLHDRVMRGIERSLKAGFQI---TVIT-TVNALTVRELSGML 167

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFR 284
                + +K           G    R
Sbjct: 168 ELLQGIGVK---RWQLQPVFGFGRMR 190


>gi|227872687|ref|ZP_03991017.1| possible 2-methylthioadenine synthetase [Oribacterium sinus F0268]
 gi|227841501|gb|EEJ51801.1| possible 2-methylthioadenine synthetase [Oribacterium sinus F0268]
          Length = 423

 Score = 50.5 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 18/157 (11%)

Query: 54  DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
           D I ++ +P+ +E+  + +  +                RY     LK+   C  YC +C 
Sbjct: 89  DEIRKE-LPEIDEITSVKDYVKRLDHQMARVESGEKYSRY-----LKIAEGCDKYCSYCI 142

Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVIFTGGDPLILSHKRLQKVLKT 168
              + G  + ++      E A A + E +        E    G D  +   K L ++L  
Sbjct: 143 IPRLRGHYR-SIPKELVLEEARALVSEGAGELILVAQETTLYGTD--LYKKKALAELLAE 199

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           L  I ++Q +R         P+ I PELI+ +K   K
Sbjct: 200 LSEIPNLQWIRI----LYCYPEEIEPELIREMKRNPK 232


>gi|228476133|ref|ZP_04060841.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|314936303|ref|ZP_07843650.1| Fe-S oxidoreductase [Staphylococcus hominis subsp. hominis C80]
 gi|228269956|gb|EEK11436.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|313654922|gb|EFS18667.1| Fe-S oxidoreductase [Staphylococcus hominis subsp. hominis C80]
          Length = 448

 Score = 50.5 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +Q      E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLVQS--GYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  I  ++ +R  S    ++  ++  E+I  LK + K 
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLEEIDGLERIRISS----IEASQLTDEVIDVLKNSNK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHV 257


>gi|224477241|ref|YP_002634847.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus carnosus
           subsp. carnosus TM300]
 gi|7674139|sp|Q9ZIM6|MOAA_STACT RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|3955209|gb|AAC83144.1| MoaA [Staphylococcus carnosus]
 gi|222421848|emb|CAL28662.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus carnosus
           subsp. carnosus TM300]
          Length = 340

 Score = 50.5 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 38/174 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           L +   C   C +C  +E+ G       K  +LS  + E  +A +     + ++  TGG+
Sbjct: 18  LSVTDRCNFRCDYCMPKEIFGDDFVFLPKDELLSFSEMER-IARVYTHLGVKKIRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPEL 196
           PL+     L K++  L  I+ V+ +                     R   V    I+ EL
Sbjct: 77  PLMRRD--LYKLIAALNEIEGVEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDNEL 134

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
            Q +                   ++  +  I    + G  +    V+ KG+NDD
Sbjct: 135 FQSINNRNIK-------------ADTILEQIDYAVSIGFKVKINVVVQKGVNDD 175


>gi|126458652|ref|YP_001054930.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM
           11548]
 gi|126248373|gb|ABO07464.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM
           11548]
          Length = 309

 Score = 50.5 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 92/220 (41%), Gaps = 39/220 (17%)

Query: 101 LLHVCPVYCRFCFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           +   C   C FC      G Q  +G+ L+++D E A +Y+  K  +++   TGG+PL+  
Sbjct: 17  VDDECNYNCLFC---HFEGQQRRQGSTLTAEDYEFA-SYVFSKLGVYDFKLTGGEPLLRR 72

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPY 217
              + K+++ +  +  V I              +    +  L +AG + + ++IH   P 
Sbjct: 73  D--IDKIVEAIARVAAVSITTNGL---------LLRRWVDRLYKAGLRKINVSIHTADPE 121

Query: 218 EF-------SEEAIAAISRL---ANAGIILLSQSVLLKGINDDPEILANLMR--TFVELR 265
           ++       +      +  L    N G+ +   +V+L+GIN D + +  L++    ++  
Sbjct: 122 KYSKVVGAPTWAFKEVLRGLQESRNRGLAIKLNAVVLRGINTDDKSVKELVKLAASLDAS 181

Query: 266 IKPYYLHHPDLAAGT-----SHFRLTIEEGQKIVASLKEK 300
           ++        + +G+       +   IE   +IV  L  +
Sbjct: 182 LQ----FIELMPSGSGLKVFGDYYEPIETIAEIVTRLGGR 217


>gi|148270762|ref|YP_001245222.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
 gi|147736306|gb|ABQ47646.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
          Length = 317

 Score = 50.5 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 80/218 (36%), Gaps = 26/218 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI- 156
           +      C   C FC + +  G  K  V S  D    +      S  +E+ F GG     
Sbjct: 6   VFLPYAGCKRRCVFCDQIKATGQTK--VPSLDDIARIIEEYSRTSNEYELGFYGG-TFTG 62

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           LS +++++ L+ ++    V+ +R  +R     P  IN   ++ LK+ G  V      +  
Sbjct: 63  LSEEQMEEYLRFVKGFPVVKSIRVSTR-----PDEINERKLKILKKYGVNVIEVGVQSFL 117

Query: 217 YEF---------SEEAIAAISRLANAGIILLSQ-SVLLKGINDDPEILANLMRTFVEL-- 264
            E          S+EA  A   +   G +L     V L G +   EIL+ L         
Sbjct: 118 DEVLEKSKRGYTSKEAERACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECGADM 177

Query: 265 -RIKPYYLH----HPDLAAGTSHFRLTIEEGQKIVASL 297
            RI P  +        +     +  L +EE   I + L
Sbjct: 178 VRIHPTLVFEGTELHRMMKEKGYTPLDVEEAVDICSDL 215


>gi|326204997|ref|ZP_08194848.1| protein of unknown function DUF512 [Clostridium papyrosolvens DSM
           2782]
 gi|325984863|gb|EGD45708.1| protein of unknown function DUF512 [Clostridium papyrosolvens DSM
           2782]
          Length = 438

 Score = 50.5 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 43/238 (18%), Positives = 72/238 (30%), Gaps = 88/238 (36%)

Query: 41  PVIAN----LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
               +    L+    P+  I         E+ +  +E ED   D   S + G        
Sbjct: 42  RYYQSSEELLLEIEKPDGEIW--------EIEVEKDETEDLGLDFEDSLIDG-------- 85

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
                   C   C FCF  ++    + TV    D                          
Sbjct: 86  -----AKSCTNKCIFCFIDQLPKGMRETVYFKDD-------------------------- 114

Query: 157 LSHKRLQKVLK---TLRYIKHVQILR-FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
               RL  +     TL  IK+ ++ R  H R+                     P+ +++H
Sbjct: 115 --DSRLSFLTGNYVTLTNIKNEELERIIHYRM--------------------SPINVSVH 152

Query: 213 ANHP--------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE---ILANLMR 259
             +P          F+ + +  I  L + GI +  Q VL + IND  E    + +L +
Sbjct: 153 TTNPDLRKFMLGNRFAGDVMDKIRMLTDNGIEVNCQIVLCRDINDKDELDKTIEDLCQ 210


>gi|118474280|ref|YP_892031.1| hypothetical protein CFF8240_0856 [Campylobacter fetus subsp. fetus
           82-40]
 gi|118413506|gb|ABK81926.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus
           82-40]
          Length = 413

 Score = 50.5 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 20/138 (14%)

Query: 87  KGIVHRY--PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQE 140
           K IV  Y    +  +K+   C   C +C     R +     +  +L+     A+  Y   
Sbjct: 121 KNIVSNYENHTKAFIKIQEGCNFKCSYCIIPSVRGKSRSIDEEVILNEAKILASNGY--- 177

Query: 141 KSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
                E++ TG +      ++   L K+L+ L  IK ++ +R  S    ++P +I+    
Sbjct: 178 ----NEIVLTGTNIGSYGEEKSSSLGKLLQKLGSIKGIKRIRLGS----IEPSQIDESFR 229

Query: 198 QCLKEAGKPVYIAIHANH 215
           + L+E+    ++ I   H
Sbjct: 230 EILQESWLEKHLHIALQH 247


>gi|21226859|ref|NP_632781.1| NifB protein [Methanosarcina mazei Go1]
 gi|20905162|gb|AAM30453.1| NifB protein [Methanosarcina mazei Go1]
          Length = 328

 Score = 50.1 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 48/244 (19%), Positives = 83/244 (34%), Gaps = 46/244 (18%)

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRR------EMVGSQKGTVLSSKDTEAALAYIQE 140
           K   H++  RI L +   C + C FC R          G     +   +  E     + +
Sbjct: 33  KNAQHKF-GRIHLAVAPKCNIQCNFCVREFDCVNESRPGVTSKVLSPREALEKTRQILAD 91

Query: 141 KSQIWEVIFTG-GDPLILSHKRLQ--KVLKTLRYIKHVQI----------------LRFH 181
              I  V   G GDPL  + +  +  ++++       V +                LR  
Sbjct: 92  YPFIKVVAIAGPGDPL-ANDETFETFELIRK--EFPEVTLCMSTNGLMLPEKLPDMLRVG 148

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-----HPYEFS-EEAIAAISRLANAGI 235
                V    I+PE+   +        +  H          E   +  +  I    +AGI
Sbjct: 149 VSTLTVTVNAIDPEIQAKIVNH-----VVYHGKVYRGVEAAEIQIKNQLEGIKAAIDAGI 203

Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA-AGT-SHFRLTIEEGQKI 293
           ++   +VL+ GIND  + +  + R   EL +  Y ++   L   G  +H      E +K 
Sbjct: 204 VVKVNTVLIPGIND--KHVVEIARKLNELGV--YIMNVMPLINQGAFAHLEPPTAEERKA 259

Query: 294 VASL 297
           V   
Sbjct: 260 VQEA 263


>gi|319400639|gb|EFV88864.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis FRI909]
          Length = 340

 Score = 50.1 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 38/174 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G       K  +L+ ++    ++ I  +  + ++  TGG+
Sbjct: 18  ISVTDRCNFRCDYCMPKEIFGDDYTFLPKDELLTFEELTR-ISKIYAQLGVKKIRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+   + L K+++ L  I  ++ +   +                 LK+ GK +Y     
Sbjct: 77  PLL--RRNLYKLIEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLYQAGLR 121

Query: 209 -IAIHA-----NHPYEFSEEAIAAISRL------ANAGIILLSQSVLLKGINDD 250
            I +       N   E +   I A + L       + G  +    V+ KG+ND+
Sbjct: 122 RINVSLDAIEDNVFQEINNRNIKASTILEQIDYAVSIGFEVKVNVVIQKGVNDN 175


>gi|170289492|ref|YP_001739730.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
 gi|170176995|gb|ACB10047.1| Radical SAM domain protein [Thermotoga sp. RQ2]
          Length = 317

 Score = 50.1 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 50/218 (22%), Positives = 80/218 (36%), Gaps = 26/218 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI- 156
           +      C   C FC + +  G  K  V S  D    +      S  +E+ F GG     
Sbjct: 6   VFLPYAGCKRRCVFCDQIKATGQTK--VPSLDDIARIIEEYSRTSNEYELGFYGG-TFTG 62

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           LS +++++ L+ ++    V+ +R  +R     P  IN   ++ LK+ G  V      +  
Sbjct: 63  LSEEKMEEYLRFVKRFPVVKSIRVSTR-----PDEINERKLKILKKYGVNVIEIGVQSFL 117

Query: 217 YEF---------SEEAIAAISRLANAGIILLSQ-SVLLKGINDDPEILANLMRTFVEL-- 264
            E          SEEA  A   +   G +L     V L G +   EIL+ L         
Sbjct: 118 DEVLERSKRGYTSEEAERACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECGADM 177

Query: 265 -RIKPYYLH----HPDLAAGTSHFRLTIEEGQKIVASL 297
            RI P  +        +     +  L +EE   I + L
Sbjct: 178 VRIHPTLVFEGTELHRMMEEGEYTPLNVEEAVDICSDL 215


>gi|323464328|gb|ADX76481.1| conserved hypothetical protein [Staphylococcus pseudintermedius
           ED99]
          Length = 449

 Score = 50.1 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKKVIEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  +  ++ +R  S    ++  ++  E+I+ L+++ K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETVDGLERIRISS----IEASQLTDEVIEVLQQSQK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|315452778|ref|YP_004073048.1| MiaB-like tRNA modifying protein [Helicobacter felis ATCC 49179]
 gi|315131830|emb|CBY82458.1| MiaB-like tRNA modifying enzyme,2-methylthioadenine synthetase
           [Helicobacter felis ATCC 49179]
          Length = 418

 Score = 50.1 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 56/129 (43%), Gaps = 16/129 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C   C +C    + G  +  +      +  L  ++   +  I E++ TG
Sbjct: 132 KTRAFVKIQEGCDFKCSYCVIPLVRGKSRSLIE-----DQILDQVRVLAQKGIVEIVLTG 186

Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKP 206
            +       +   + ++++ +  I+ ++ +R  S    ++P +I+ E ++ L      K 
Sbjct: 187 TNVGSYGKETRSNIARLIQKIARIEGIKRVRIGS----LEPSQIDAEFLELLDHPILEKH 242

Query: 207 VYIAIHANH 215
           ++IA+  +H
Sbjct: 243 LHIALQHSH 251


>gi|319892634|ref|YP_004149509.1| MiaB family protein, possibly involved in tRNA or rRNA modification
           [Staphylococcus pseudintermedius HKU10-03]
 gi|317162330|gb|ADV05873.1| MiaB family protein, possibly involved in tRNA or rRNA modification
           [Staphylococcus pseudintermedius HKU10-03]
          Length = 449

 Score = 50.1 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKKVIEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  +  ++ +R  S    ++  ++  E+I+ L+++ K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETVDGLERIRISS----IEASQLTDEVIEVLQQSQK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|315658148|ref|ZP_07911020.1| Fe-S oxidoreductase [Staphylococcus lugdunensis M23590]
 gi|315496477|gb|EFU84800.1| Fe-S oxidoreductase [Staphylococcus lugdunensis M23590]
          Length = 451

 Score = 50.1 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   +   E++ TG  
Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKKVVEQATTLV--NAGYKEIVLTGIH 201

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  I  ++ +R  S    ++  ++  E+I  ++++ K 
Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLETIDSLERIRISS----IEASQLTDEVIDVIEKSNK- 253

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 254 VVRHLHI 260


>gi|227501282|ref|ZP_03931331.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Anaerococcus
           tetradius ATCC 35098]
 gi|227216515|gb|EEI81921.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Anaerococcus
           tetradius ATCC 35098]
          Length = 312

 Score = 50.1 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 67/165 (40%), Gaps = 27/165 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-----AALAYIQEKSQIWEVIFTGGD 153
           + +   C   C++C     +G     +L  +D         +A I     I ++  TGG+
Sbjct: 14  ISVTDRCNFRCKYC-----IGDDGVDLLKHEDILSYEEIKEIAEICADFGIKKIRVTGGE 68

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
           P +   + L  + + L  I  ++ +         +  +I  +L + L+E G K +  ++ 
Sbjct: 69  PFV--RRGLLNLFEMLTKIDGIEDI-----GVTTNGSKIYDKL-ERLRELGIKRINFSLD 120

Query: 213 A---NHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGIND 249
               +   + ++     E   +I++    G  +   +VL+KG ND
Sbjct: 121 TLDRDKFRQITKVDCLNEVKKSINKALELGFRVKINTVLIKGFND 165


>gi|15615089|ref|NP_243392.1| molybdenum cofactor biosynthesis protein A [Bacillus halodurans
           C-125]
 gi|24212015|sp|Q9K9W9|MOAA_BACHD RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|10175146|dbj|BAB06245.1| molybdopterin cofactor biosynthesis [Bacillus halodurans C-125]
          Length = 338

 Score = 50.1 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 25/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C   ++ G       K  +LS ++T   +    + S I ++  TGG+
Sbjct: 19  ISVTDRCNFRCHYCMPADIFGPDYPFLKKTEILSFEETNRLVHLFHQTSPIKKIRITGGE 78

Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211
           PL+     +L  +L     I+ V +    + +P         ++   LK+AG K V +++
Sbjct: 79  PLMRKDVDQLISMLTATTGIEDVAMTTNGTLLP---------KMADKLKKAGLKRVTVSL 129

Query: 212 HANHPYEF---------SEEAIAAISRLANAGIILLSQSVLLKGIND 249
            +    +F         ++  +  +     AG+ +    V+ KG+ND
Sbjct: 130 DSLEDEQFGKINGRGIGTKPVLDGMEAAKEAGLGVKVNMVVQKGVND 176


>gi|254172055|ref|ZP_04878731.1| radical SAM domain protein [Thermococcus sp. AM4]
 gi|214033951|gb|EEB74777.1| radical SAM domain protein [Thermococcus sp. AM4]
          Length = 419

 Score = 50.1 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 33/184 (17%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-- 145
           G++ R  + I ++ +  C + C FC   E   S+   +    D +  + +  E ++I   
Sbjct: 108 GLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167

Query: 146 --EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
             E    G G+PLI   +   ++++ LR   +V ++   S   +     +  +L++ L E
Sbjct: 168 GLEAHLDGQGEPLIYPFRV--ELVQALREHPNVSVISMQSNGTL-----LTDKLVEELAE 220

Query: 203 AGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLANAGIILLSQSVLLKG 246
           AG   V ++IH         E    +                 L NAGI +L   V++ G
Sbjct: 221 AGLDRVNLSIH-----SLDPEKAKMLMGMKSYDLEHVLEMAEALVNAGIDVLIAPVIIFG 275

Query: 247 INDD 250
           INDD
Sbjct: 276 INDD 279


>gi|296188253|ref|ZP_06856645.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
           carboxidivorans P7]
 gi|296047379|gb|EFG86821.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
           carboxidivorans P7]
          Length = 262

 Score = 50.1 bits (119), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 19/118 (16%)

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           +I ++ +TGG+PLIL +  +  ++     I+ ++ +   +   ++       +L   LKE
Sbjct: 2   EIKKIRYTGGEPLILKN--ISSLISETSKIQQIKDIAITTNGILLY------DLADELKE 53

Query: 203 AGKPVYIAIHANHPYE-----FS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
           AG    + I  +   E      +      + + AI +  + GI +   +VL+KGINDD
Sbjct: 54  AGLK-RVNISLDTLKEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDD 110


>gi|289578123|ref|YP_003476750.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter italicus Ab9]
 gi|289527836|gb|ADD02188.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter italicus Ab9]
          Length = 449

 Score = 49.7 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 21/121 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  YC +C     +       + S++ E  L  ++    S   E++ TG
Sbjct: 155 RTRAYVKIQDGCNQYCTYC-----IIPYARGPVRSREPEKILEEVRRFADSGYKEIVLTG 209

Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                   D   L +  L  ++K +  I  ++ +R  S  P+        E ++ + +  
Sbjct: 210 IHIASYGKD---LKNIGLLDIIKRIHEIDGIKRIRLSSIEPVFL----TEEFVKEIAKLP 262

Query: 205 K 205
           K
Sbjct: 263 K 263


>gi|314934315|ref|ZP_07841674.1| molybdenum cofactor biosynthesis protein A [Staphylococcus caprae
           C87]
 gi|313652245|gb|EFS16008.1| molybdenum cofactor biosynthesis protein A [Staphylococcus caprae
           C87]
          Length = 341

 Score = 49.7 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 69/177 (38%), Gaps = 44/177 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           L +   C   C +C  +E+ G       K  +L+ ++    ++ I  +  + ++  TGG+
Sbjct: 19  LSVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFEEMTR-ISRIYAELGVKKIRITGGE 77

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+   + L ++++ L  I+ ++ +   +                 LK+ G+ +Y     
Sbjct: 78  PLL--RRNLYQLIEQLNEIEGIEDIGLTTNGL-------------LLKKHGQNLYNAGLR 122

Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
            I +  +      +E   AI+        +L Q               V+ KG+NDD
Sbjct: 123 RINVSLDA---IDDEVFQAINNRNIKASTILEQIDYAVSIGFHVKVNVVIQKGVNDD 176


>gi|223042523|ref|ZP_03612572.1| molybdenum cofactor biosynthesis protein A [Staphylococcus capitis
           SK14]
 gi|222444186|gb|EEE50282.1| molybdenum cofactor biosynthesis protein A [Staphylococcus capitis
           SK14]
          Length = 341

 Score = 49.7 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 69/177 (38%), Gaps = 44/177 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           L +   C   C +C  +E+ G       K  +L+ ++    ++ I  +  + ++  TGG+
Sbjct: 19  LSVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFEEMTR-ISRIYAELGVKKIRITGGE 77

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+   + L ++++ L  I+ ++ +   +                 LK+ G+ +Y     
Sbjct: 78  PLL--RRNLYQLIEQLNEIEGIEDIGLTTNGL-------------LLKKHGQNLYNAGLR 122

Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
            I +  +      +E   AI+        +L Q               V+ KG+NDD
Sbjct: 123 RINVSLDA---IDDEVFQAINNRNIKASTILEQIDYAVSIGFHVKVNVVIQKGVNDD 176


>gi|188997227|ref|YP_001931478.1| Radical SAM domain protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932294|gb|ACD66924.1| Radical SAM domain protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 208

 Score = 49.7 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            L+  L  C   C  C+   +V    G +      E  L  I++   +  ++ +GG+P I
Sbjct: 21  CLILFLAGCNFRCLHCYNWRVVLDIAGNIP----IERVLEEIEKSPFLECIVISGGEPTI 76

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHS 182
              + L +++ T++ +     +R  +
Sbjct: 77  HEPEELIELVNTIKKVNPELKIRIDT 102


>gi|223039951|ref|ZP_03610234.1| conserved hypothetical protein [Campylobacter rectus RM3267]
 gi|222878819|gb|EEF13917.1| conserved hypothetical protein [Campylobacter rectus RM3267]
          Length = 431

 Score = 49.7 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 41/212 (19%), Positives = 78/212 (36%), Gaps = 35/212 (16%)

Query: 63  QKEELNILPEEREDPIGDNNH--SPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREMV 118
            K+E      + +DP  +  +  S  K IV  Y    +  +K+   C   C +C     +
Sbjct: 111 SKKEDINALLKSQDPFFELGNLKSIDKNIVTNYENHTKAFIKIQEGCDFACSYCI----I 166

Query: 119 GSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIK 173
            + +G   S  + EA L    I   +   E++ TG +           L ++L  L  + 
Sbjct: 167 PAVRGKARSMDE-EAILREAKILAYNGYNELVLTGTNIGSYGKDTGSSLGRLLGRLGKVG 225

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
            ++ +R  S    ++P +I+    + L+E+    ++ I   H  E       A+ R+   
Sbjct: 226 GIKRIRLGS----IEPSQIDESFREILRESWLERHLHIALQHTSE-------AMLRIMRR 274

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELR 265
                +Q+        D E+   L      L 
Sbjct: 275 ----RNQAF------RDLELFLELSEMGFALG 296


>gi|240102758|ref|YP_002959067.1| Radical SAM protein, elongator protein 3/MiaB/NifB related
           [Thermococcus gammatolerans EJ3]
 gi|239910312|gb|ACS33203.1| Radical SAM protein, elongator protein 3/MiaB/NifB related
           [Thermococcus gammatolerans EJ3]
          Length = 419

 Score = 49.7 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 38/199 (19%)

Query: 78  IGDNNHSPL-----KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           I +    PL      G++ R  + I ++ +  C + C FC   E   S+   +    D +
Sbjct: 93  IHEALDVPLLGYNAFGLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDID 152

Query: 133 AALAYIQEKSQIW----EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             + +  E ++I     E    G G+PLI   +   ++++ LR   +V ++   S   + 
Sbjct: 153 YLMKWFDEVARIKGKGLEAHLDGQGEPLIYPFRV--ELVQALREHPNVSVISMQSNGTL- 209

Query: 188 DPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLA 231
               +  +L++ L EAG   V ++IH         E    +                 L 
Sbjct: 210 ----LTDKLVEELAEAGLDRVNLSIH-----SLDPEKAKMLMGMKSYDLDHVLEMAEALV 260

Query: 232 NAGIILLSQSVLLKGINDD 250
           NAGI +L   V++ GINDD
Sbjct: 261 NAGIDVLIAPVIIFGINDD 279


>gi|116753747|ref|YP_842865.1| radical SAM domain-containing protein [Methanosaeta thermophila PT]
 gi|116665198|gb|ABK14225.1| Radical SAM domain protein [Methanosaeta thermophila PT]
          Length = 365

 Score = 49.7 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 20/162 (12%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           +P  ++L +   C + C +C+     G      +     + A+  + E +  ++V   GG
Sbjct: 22  HPRTLILWVTTDCNLRCVYCYAN---GGDNKAYMGWDVAKRAIDLVAEGADCFKVQLAGG 78

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           +PL L+   +++++  +  +     ++  +   ++ P      +   L+  G  V +++ 
Sbjct: 79  EPL-LNFGLIERIVFYIHDLGADASIQLQTNATLISPA-----IASRLRALGIGVGVSLD 132

Query: 213 ----AN-HPYEF------SEEAIAAISRLANAGIILLSQSVL 243
                N H   F      +   I  I  L +AGI +   SVL
Sbjct: 133 GVPAINDHLRPFADGHGSTHSVINGIRNLRDAGISVGMTSVL 174


>gi|220904538|ref|YP_002479850.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
 gi|219868837|gb|ACL49172.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
           desulfuricans subsp. desulfuricans str. ATCC 27774]
          Length = 344

 Score = 49.7 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 31/167 (18%)

Query: 99  LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C             VL  ++    +  I  +  + +V  TGG+P   
Sbjct: 29  LSVTDRCNLRCMYCCSNARQTCIPHTQVLRYEEMARMVG-IMARLGVTKVRLTGGEPFAR 87

Query: 158 S--HKRLQKVLKTLRYI------------KHVQILR-FHSRVPIVDPQRINPELIQCLKE 202
                 L  +      +             H+ +LR    +   +     + E    +  
Sbjct: 88  KGCDGFLYMLHSRFPDMDLRLTTNGTLLEPHIPLLRQVGVKAVNLSLDSFDRETFAKVTG 147

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
                          +     ++A+ RL +AGI +   +V ++G+ND
Sbjct: 148 --------------RDMQPAVLSALDRLLSAGIRVKVNAVAMRGVND 180


>gi|258424004|ref|ZP_05686886.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9635]
 gi|257845625|gb|EEV69657.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9635]
          Length = 448

 Score = 49.7 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S+  E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSEYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  L+ + K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|268679888|ref|YP_003304319.1| MiaB-like tRNA modifying enzyme [Sulfurospirillum deleyianum DSM
           6946]
 gi|268617919|gb|ACZ12284.1| MiaB-like tRNA modifying enzyme [Sulfurospirillum deleyianum DSM
           6946]
          Length = 414

 Score = 49.7 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 33/184 (17%)

Query: 89  IVHRY--PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQI 144
           IVH Y    +  +K+   C   C +C     V         S+D +  +  ++    +  
Sbjct: 124 IVHEYTGKTKAFIKIQEGCNFRCSYCII-PFVRGN----ARSQDEQKIIEQVEKLALNGY 178

Query: 145 WEVIFTGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
            E + TG +       +   L ++++ L  I+ V+ +R  S    ++P +I+    + L 
Sbjct: 179 GEFVLTGTNIGSYGKDKGSSLGRLVQRLGAIRGVRRIRLGS----IEPVQIDESFREILN 234

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           E     ++ I   H  E       A+ +L        +       +  D E+   L    
Sbjct: 235 EPWLERHLHIALQHTSE-------AMLQLMRR----RN------NVKRDLELFMELGEKG 277

Query: 262 VELR 265
             L 
Sbjct: 278 FALG 281


>gi|307636979|gb|ADN79429.1| MiaB family protein [Helicobacter pylori 908]
 gi|325995571|gb|ADZ50976.1| MiaB-like tRNA modifying enzyme [Helicobacter pylori 2018]
 gi|325997166|gb|ADZ49374.1| putative MiaB like protein [Helicobacter pylori 2017]
          Length = 418

 Score = 49.7 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 16/129 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKP 206
            +       R   + +++K L  I  ++ +R  S    ++P +IN E ++ L E    K 
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQITGLKRIRIGS----LEPNQINDEFLELLGEDFLEKH 243

Query: 207 VYIAIHANH 215
           ++IA+  +H
Sbjct: 244 LHIALQHSH 252


>gi|157164712|ref|YP_001466755.1| hypothetical protein CCC13826_0085 [Campylobacter concisus 13826]
 gi|157101465|gb|EAT97324.2| conserved hypothetical protein [Campylobacter concisus 13826]
          Length = 412

 Score = 49.7 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 41/192 (21%)

Query: 83  HSPLKGIVHRY--PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALA 136
           +S  K IV  Y    +  +K+   C   C +C     R +     +  +L      A   
Sbjct: 117 NSVDKNIVTNYENHTKAFIKIQEGCNFNCSYCIIPSVRGKARSMDEAMILKEARILAQNG 176

Query: 137 YIQEKSQIWEVIFTGGDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
           Y        E++ TG +       ++  L K+L  L  I  ++ +R  S    ++P +I+
Sbjct: 177 Y-------NELVLTGTNIGSYGKDTNSSLGKLLANLGKISGIRRIRLGS----IEPSQID 225

Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
               + LKE     ++ I   H          A+ +             +++  N+    
Sbjct: 226 ESFREILKEEWLERHLHIALQH-------TSQAMLK-------------IMRRRNNAFSD 265

Query: 254 LANLMRTFVELR 265
           L  L      L 
Sbjct: 266 L-ELFNELSSLG 276


>gi|297570341|ref|YP_003691685.1| molybdenum cofactor biosynthesis protein A [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296926256|gb|ADH87066.1| molybdenum cofactor biosynthesis protein A [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 368

 Score = 49.7 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 16/187 (8%)

Query: 84  SPLKGIV--H-RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
            P+ G+   H R  + + L +   C + CR+C  +      +  +LS ++ E     +  
Sbjct: 37  EPVSGLTDNHGRMVNYVRLAVTDRCNLNCRYCRPKGPCNEPRRELLSYEELERICRLLVA 96

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
              I +V  TGG+PL+     +   L+ LR IK +Q L   +   ++ P       ++ L
Sbjct: 97  M-GISKVRVTGGEPLV--RHGMLGFLRQLRDIKGLQQLALTTNATLLAPHL---SELRQL 150

Query: 201 KEAGKPVYIAI------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEI 253
           + +G  + +         A    +      A I     AG+ +   +V+ +GIN D+   
Sbjct: 151 RLSGLNISLDTLQPERFAAITGQDLFARVFAVIEAAVAAGMPVKINAVVQEGINTDELLE 210

Query: 254 LANLMRT 260
           LA L   
Sbjct: 211 LARLAEK 217


>gi|206895763|ref|YP_002246862.1| oxygen-independent coproporphyrinogen III oxidase
           [Coprothermobacter proteolyticus DSM 5265]
 gi|206738380|gb|ACI17458.1| oxygen-independent coproporphyrinogen III oxidase
           [Coprothermobacter proteolyticus DSM 5265]
          Length = 258

 Score = 49.7 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 17/120 (14%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTG 151
           YP   +      C   C FC +R      +      +  E A  YIQ+ + +  E+ F G
Sbjct: 4   YP---VFLSHAGCRQRCVFCNQRA----AERIKPWKESIEEAFHYIQKSNLVYDEIAFYG 56

Query: 152 GDPLILSHKRLQKVLKT---LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           G P   S   L+ +L+       I  ++ +R  +R     P  IN  +IQ L + G    
Sbjct: 57  GTP-TSSENLLKDILQPFQTFLKIGKIKGIRISTR-----PDEINESIIQILVDYGVSTV 110


>gi|281416862|ref|ZP_06247882.1| RNA modification enzyme, MiaB family [Clostridium thermocellum
           JW20]
 gi|281408264|gb|EFB38522.1| RNA modification enzyme, MiaB family [Clostridium thermocellum
           JW20]
          Length = 434

 Score = 49.7 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 49/116 (42%), Gaps = 11/116 (9%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           V++   R  +K+   C  +C +C      G  +    S ++    ++ +   S   EV+ 
Sbjct: 138 VYKERTRAFIKIQEGCNQFCTYCIIPYARGPVRSR--SEENILKEVSGL-AHSGYKEVVL 194

Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
           TG         + +  L  +++ +  I+ ++ +R  S    ++P  +  E ++ +K
Sbjct: 195 TGIHVASYGKDIKNTSLIDIIRKVHEIEGIERIRLGS----IEPTTVTEEFVRAIK 246


>gi|107022977|ref|YP_621304.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           cenocepacia AU 1054]
 gi|116686780|ref|YP_840027.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           cenocepacia HI2424]
 gi|105893166|gb|ABF76331.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia AU 1054]
 gi|116652495|gb|ABK13134.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia HI2424]
          Length = 374

 Score = 49.7 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 58/233 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
           L ++  C   C +C  RE  G+    + SS+    A L  I        + ++  TGG+P
Sbjct: 46  LSVIDQCNFRCGYCMPRESFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEP 105

Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
           L+   + L+ +++ L  +  V                    + LR    SRV +     +
Sbjct: 106 LL--RRNLEALIERLAALTTVDGKPVEIALTTNGSLLAAKARALRDAGLSRVTVSL-DAL 162

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
           +  + + + +A  PV   +             A I     AG   +   +V+ +G+NDD 
Sbjct: 163 DDAVFRRMSDADVPVARVL-------------AGIEAAHAAGLAPVKVNAVIERGVNDD- 208

Query: 252 EILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296
             +  L+R F    +      Y         G S +     +     ++++  
Sbjct: 209 -QILPLVRHFRHTGVAVRFIEY-----MDVGGASFWSGDKVVPAARMRELIDE 255


>gi|125972674|ref|YP_001036584.1| RNA modification protein [Clostridium thermocellum ATCC 27405]
 gi|256004833|ref|ZP_05429807.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
           2360]
 gi|125712899|gb|ABN51391.1| RNA modification enzyme, MiaB family [Clostridium thermocellum ATCC
           27405]
 gi|255991143|gb|EEU01251.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
           2360]
 gi|316941090|gb|ADU75124.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM
           1313]
          Length = 434

 Score = 49.7 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 49/116 (42%), Gaps = 11/116 (9%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           V++   R  +K+   C  +C +C      G  +    S ++    ++ +   S   EV+ 
Sbjct: 138 VYKERTRAFIKIQEGCNQFCTYCIIPYARGPVRSR--SEENILKEVSGL-AHSGYKEVVL 194

Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
           TG         + +  L  +++ +  I+ ++ +R  S    ++P  +  E ++ +K
Sbjct: 195 TGIHVASYGKDIKNTSLIDIIRKVHEIEGIERIRLGS----IEPTTVTEEFVRAIK 246


>gi|310779932|ref|YP_003968264.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
 gi|309749255|gb|ADO83916.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
          Length = 292

 Score = 49.7 bits (118), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 19/152 (12%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +LL++   C    C FC           ++    KD + A    +    I  V    GD 
Sbjct: 17  LLLQVTVGCAHNKCAFCTMYRETQFSTESIEQVEKDLKEAR---KIHKSIKRVFLVNGDA 73

Query: 155 LILSHKRLQKVLKT-LRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
            +L   RL+ + +  + Y   V+++    H         + + EL +  K     +++ +
Sbjct: 74  FVLGASRLKPIAEKIIEYFPEVEVITMYAH---INNIKGKTDEELKELAKLRINDLWVGV 130

Query: 212 HANHPYEFS--------EEAIAAISRLANAGI 235
              H             EEA   + RL +AGI
Sbjct: 131 ETGHEEALKYLDKGFNLEEAKEQLKRLGDAGI 162


>gi|313904622|ref|ZP_07837997.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
 gi|313470592|gb|EFR65919.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
          Length = 457

 Score = 49.3 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 44/239 (18%), Positives = 86/239 (35%), Gaps = 52/239 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIFTGGDPL 155
           +     C   C +CF    VG      ++ +  E  + YI E        ++++ GG+PL
Sbjct: 119 IFPTSTCNAKCVYCFEENFVG----YTMTKEVQEQVVKYILETKMPGHAIDLLWFGGEPL 174

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAI-- 211
           I   K +  +   LR    V+     + + + +   +  ++   +K     + V I +  
Sbjct: 175 I-GAKIIDYICSELRKNG-VEF----TSMIVTNASLLTEDVADRMKNDWNIRQVQITLDG 228

Query: 212 ----------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN---DDPEILANLM 258
                     + +    +  +AIAAI R+++ GI      VL++ +N   ++ E L  L+
Sbjct: 229 TQEEYDARKCYIDDSRSYFPQAIAAIHRVSDRGIP-----VLIR-LNLDRNNAENLRELI 282

Query: 259 RTF-------VELRIKPYYLHHPDLAAGTSHFRLTIEEGQK--IVASLK--EKISGLCQ 306
                       L + P  LH                 G    ++   +     SGL +
Sbjct: 283 DYLEVEFPKKNNLYVYPGLLHQLMREKNAMDMW-----GVHASLMEYARSKGFCSGLMR 336


>gi|15807624|ref|NP_293989.1| molybdenum cofactor biosynthesis protein A [Deinococcus radiodurans
           R1]
          Length = 247

 Score = 49.3 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 69/182 (37%), Gaps = 26/182 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C + C +C   E+ G       +  +LS ++ E             ++  TGG+
Sbjct: 15  ISVTDRCNLRCTYCMPAEVFGPDYAFLPRAELLSFEEIERLARVFVGLGA-EKLRITGGE 73

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIH 212
           P +     L ++L  L     VQ L   +         + P L   LK AG   V I++ 
Sbjct: 74  PTLRRD--LPELLARLAAFPGVQDLAMTTNGL------LLPRLAADLKAAGLQRVTISLD 125

Query: 213 ANHPY---EFSEE------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
           +  P    E +         +  I    +AG+ +   +V+ +G+ND  E L  L R   E
Sbjct: 126 SLDPQVFGEMNGLGVSPQKVLGGIEAALHAGLGVKINTVVKRGVND--EHLTELWRGLRE 183

Query: 264 LR 265
             
Sbjct: 184 FG 185


>gi|331090850|ref|ZP_08339696.1| hypothetical protein HMPREF9477_00339 [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330399709|gb|EGG79371.1| hypothetical protein HMPREF9477_00339 [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 437

 Score = 49.3 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 71/188 (37%), Gaps = 41/188 (21%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       +  T      +
Sbjct: 82  LMDEYRSCRNKCMFCFIDQMPKGMRDTLYFKDD-DSRLSFLQGN----YITLT-----NM 131

Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           S   +++++K  L  I     +  H+     +P+         L+         +H    
Sbjct: 132 SDDDVRRIVKYHLEPI----NISIHT----TNPE---------LR------CKMLH---- 164

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             F+ EA+  +  L   GI +  Q VL KG ND  E+  ++       +  PY      +
Sbjct: 165 NRFAGEALKKVDILYEGGITMNGQIVLCKGENDGEELERSIRD---MTKYLPYLQSVSVV 221

Query: 277 AAGTSHFR 284
             G + +R
Sbjct: 222 PVGLTKYR 229


>gi|291522203|emb|CBK80496.1| Fe-S oxidoreductase, related to NifB/MoaA family [Coprococcus catus
           GD/7]
          Length = 444

 Score = 49.3 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 65/162 (40%), Gaps = 38/162 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  ++    + T+    D ++ L+++Q       +  T      +
Sbjct: 83  LMDDYRSCSNNCIFCFIDQLPKGMRETMYFKDD-DSRLSFLQGN----YITMT-----NM 132

Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
             + L+++++  L  I     +  H+     +P+         L+       + +H    
Sbjct: 133 KDEALERIIRYKLEPI----NVSVHT----TNPE---------LR------CMMLH---- 165

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
             F+ + +  + +L   GII+  Q VL K +ND  E+  ++ 
Sbjct: 166 NRFAGKIMEQLQKLYEGGIIMNGQIVLCKNVNDGEELERSIR 207


>gi|62184901|ref|YP_219686.1| hypothetical protein CAB260 [Chlamydophila abortus S26/3]
 gi|62147968|emb|CAH63716.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
          Length = 421

 Score = 49.3 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 45/195 (23%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  +K+   C  +C +C    + G  +     S+  +  L  I         EV+  G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSR-----SRPVQEILEEISGLVSQGYREVVIAG 188

Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
            +        K L  ++  +  I  ++ +R  S    +DP+ +  +L   L  +GK    
Sbjct: 189 INVGDYQDQGKSLAYLISQVDEIPGIERIRISS----IDPEDVQDDLRDVLL-SGKHTC- 242

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQS---VLLKGIND--DPEILANLMRTFVEL 264
             H++H                     L+ QS    +LK +N         + +      
Sbjct: 243 --HSSH---------------------LVLQSGSNAILKRMNRKYSRGDFLDCVEALRSA 279

Query: 265 RIKPYYLHHPDLAAG 279
              P Y    D+  G
Sbjct: 280 --DPQYTFTTDVIVG 292


>gi|301165856|emb|CBW25429.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 433

 Score = 49.3 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 10/115 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C   C FC        +   +  +   E A   I++     E++ TG  
Sbjct: 144 HTRAFLKIQDGCNYVCSFCII-PFARGRSKAISINGALENAKKLIED--GFKEIVLTGVN 200

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            G+    S ++L  ++K L  ++ ++ LR  S    V+P  I  EL++  K + K
Sbjct: 201 IGEYETSSGEKLTDMVKALLDLEGLERLRLSS----VEPNTITDELLEVFKSSPK 251


>gi|52787593|ref|YP_093422.1| molybdenum cofactor biosynthesis protein A [Bacillus licheniformis
           ATCC 14580]
 gi|163119684|ref|YP_080993.2| molybdenum cofactor biosynthesis protein A [Bacillus licheniformis
           ATCC 14580]
 gi|319648075|ref|ZP_08002292.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. BT1B_CT2]
 gi|81608871|sp|Q65DY5|MOAA_BACLD RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|52350095|gb|AAU42729.1| MoaA [Bacillus licheniformis ATCC 14580]
 gi|145903194|gb|AAU25355.2| MoaA [Bacillus licheniformis ATCC 14580]
 gi|317389710|gb|EFV70520.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. BT1B_CT2]
          Length = 341

 Score = 49.3 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 68/173 (39%), Gaps = 39/173 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C + C +C   E+ G       KG +LS ++ E        +  + ++  TGG+
Sbjct: 21  ISVTDRCNLRCTYCMPAEIFGQDYPFLPKGELLSFEELERLAKLFVHQFGVEKIRLTGGE 80

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSR---VPIVDPQRINPELIQCLKEAG-KPVYI 209
           PL+     + +++  L  IK ++ +   +    +P+             LK+AG K V +
Sbjct: 81  PLMRKD--MPELVGKLAGIKGIRDIAMTTNGVLLPVY---------ADKLKKAGLKRVTV 129

Query: 210 AIHANHPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGIN 248
           ++         +E               +A I     AG+ +    V+ KG+N
Sbjct: 130 SL-----DSLDDERFKSINGRGVSVSKVLAGIEAAKKAGLGVKINMVVQKGVN 177


>gi|295092927|emb|CBK82018.1| MiaB-like tRNA modifying enzyme [Coprococcus sp. ART55/1]
          Length = 452

 Score = 49.3 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 23/151 (15%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
           E   D   +  +  + G V     R  +K+   C  +C +C     +       + S+  
Sbjct: 134 EYFVDISRETEYEEMGGHVPVGHTRAYVKIQDGCNQFCSYC-----IIPYVRGRIRSRSQ 188

Query: 132 EAALAYIQEKSQ--IWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           EA LA + E ++  I EV+ TG        D    +   L ++++ +  IK ++ +R  S
Sbjct: 189 EAILAEVSELAEAGIKEVVLTGIHISSYGKD--KNNEGALIELIEAISKIKGIKRIRLGS 246

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
               ++P  I  E ++ +    K   +  H 
Sbjct: 247 ----LEPGIITEEFVERISSNSK---VCPHF 270


>gi|313633909|gb|EFS00625.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri FSL
           N1-067]
          Length = 335

 Score = 49.3 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 73/191 (38%), Gaps = 23/191 (12%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +    +  I  K  I +
Sbjct: 11  GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVGFME-IMVKFGIKK 66

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 67  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 118

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDDPEILAN 256
            V I++ + H   F               I +    G   +    VL+KG NDD      
Sbjct: 119 RVNISLDSLHADRFQTITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDXX 178

Query: 257 LMRTFVELRIK 267
                 ++ I+
Sbjct: 179 QFTKDKDINIR 189


>gi|310643276|ref|YP_003948034.1| gtp cyclohydrolase subunit moaa [Paenibacillus polymyxa SC2]
 gi|309248226|gb|ADO57793.1| GTP cyclohydrolase subunit MoaA [Paenibacillus polymyxa SC2]
          Length = 338

 Score = 49.3 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 44/190 (23%)

Query: 86  LKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ- 143
           LK ++ R P R L + +   C   C +C  +E+ G     +  S+    +   I   ++ 
Sbjct: 6   LKDLLRR-PIRDLRISVTDRCNFRCSYCMPKEIFGDDFAFLPKSECL--SFEEIHRLTEL 62

Query: 144 -----IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL--------------RF---H 181
                + ++  TGG+PL+  +  L  ++  +  I  V+ +              R     
Sbjct: 63  FVGLGVKKIRLTGGEPLMRPN--LPDLVSRILSINGVEDMGLTTNGLLLGQQAQRLYDAG 120

Query: 182 SRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            R   V    +NPEL   +   G KP +I    +   E               G  +   
Sbjct: 121 LRRLNVSVDALNPELFGRMNGRGIKPAFILKQIDCAREI--------------GFEIKVN 166

Query: 241 SVLLKGINDD 250
            V+ KG+ND 
Sbjct: 167 MVVQKGVNDS 176


>gi|282890695|ref|ZP_06299215.1| hypothetical protein pah_c026o007 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281499288|gb|EFB41587.1| hypothetical protein pah_c026o007 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 430

 Score = 49.3 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 18/130 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  +K+   C  +C +C    + G  +   +  +  +     I       E++ TG  
Sbjct: 133 HTRAFVKVQDGCNEFCTYCIIPYVRGRSRSRTIP-EIIDEVKDLISN--GFKEIVLTGIN 189

Query: 152 -----GDPLI-LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL---KE 202
                G+P+  +   RL  +++ +  +  ++ LR  S    +DP  I+ EL   +    +
Sbjct: 190 IGDFDGNPVEGMPPHRLVDLVRAVDQVPGLKRLRISS----IDPDEIDDELADAVLNGAK 245

Query: 203 AGKPVYIAIH 212
               ++I + 
Sbjct: 246 TCHSMHIVLQ 255


>gi|242243931|ref|ZP_04798374.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
           epidermidis W23144]
 gi|242232564|gb|EES34876.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
           epidermidis W23144]
          Length = 340

 Score = 49.3 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 38/174 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G       K  +L+ ++    ++ I  +  + ++  TGG+
Sbjct: 18  ISVTDRCNFRCDYCMPKEIFGDDYTFLPKDELLTFEELTR-ISKIYAQLGVKKIRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+   + L K+++ L  I  ++ +   +                 LK+ GK +Y     
Sbjct: 77  PLL--RRNLYKLVEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLYQAGLR 121

Query: 209 -IAIHA-----NHPYEFSEEAIAAISRL------ANAGIILLSQSVLLKGINDD 250
            I +       N   E +   I A + L       + G  +    V+ KG+ND+
Sbjct: 122 RINVSLDAIEDNVFQEINNRNIKASTILEQIDYAVSIGFEVKVNVVIQKGVNDN 175


>gi|317128920|ref|YP_004095202.1| molybdenum cofactor biosynthesis protein A [Bacillus
           cellulosilyticus DSM 2522]
 gi|315473868|gb|ADU30471.1| molybdenum cofactor biosynthesis protein A [Bacillus
           cellulosilyticus DSM 2522]
          Length = 339

 Score = 49.3 bits (117), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 65/170 (38%), Gaps = 31/170 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-AALAYIQ----EKSQIWEVIFTGGD 153
           L +   C   CR+C   E+       +  ++      +AYI     + + I +V  TGG+
Sbjct: 18  LSVTDRCNFRCRYCMPPEIFDKNFQFLPKNEVLTLEEMAYITKLFVKAASIKKVRITGGE 77

Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-------RINPELIQCLKE--- 202
           PL+  +   L  +++ +  I+ + +    S +P    +       R+   L  CL +   
Sbjct: 78  PLMRQNVSHLIALIREIEAIEDIAMTTNGSLLPKYAKELKENGLDRVTISL-DCLDDEKF 136

Query: 203 ---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
               G+ + +              +  I     AG+ +    V+ +G+ND
Sbjct: 137 RYINGRDISVNT-----------VLEGIKAAKKAGLHVKINMVVKRGMND 175


>gi|225166845|ref|YP_002650830.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
           botulinum]
 gi|253771364|ref|YP_003034203.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum D
           str. 1873]
 gi|225007509|dbj|BAH29605.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
           botulinum]
 gi|253721341|gb|ACT33634.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum D
           str. 1873]
          Length = 320

 Score = 49.3 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 68/165 (41%), Gaps = 23/165 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
           + L   C + C +C  +E    ++       + E  + +++      I +V +TGG+PLI
Sbjct: 14  ISLTEKCNLKCIYCMPKESYLEERHCTKKISN-EEIIKFLKASVNLGIKKVRYTGGEPLI 72

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           +    + K++     I  +  +   +   ++       ++++ LK +G    + I  +  
Sbjct: 73  VKD--IDKLIYDTGKIPEINDISITTNGILLY------DMVEELKNSGLK-RVNISLDTL 123

Query: 217 YE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
            E      +      +    I +  + G+  L    VLLKGINDD
Sbjct: 124 KEDRFKKITRNGDINKVFQGIDKCLSLGMTPLKINVVLLKGINDD 168


>gi|222529152|ref|YP_002573034.1| radical SAM domain-containing protein [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222455999|gb|ACM60261.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725]
          Length = 341

 Score = 49.3 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 18/154 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +    + CP  C FC ++ + G ++   L    +  E  L  I    ++ E+ + GG+  
Sbjct: 8   IFIPQYACPFNCIFCNQKTISGEKEEVSLDRIKRQIEQGLK-INSDEEV-ELAYYGGNFT 65

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIH 212
            +     +K+L+     + ++ +R  +R     P  I+ E ++ LK          I   
Sbjct: 66  AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLRLLKLYNVRTIELGIQSM 120

Query: 213 ANHPYEFSE------EAIAAISRLANAGIILLSQ 240
            +H    S        +  A+  +   G +L  Q
Sbjct: 121 FDHVLNASARGHTAQHSKNAMEMIKKFGFLLGVQ 154


>gi|158319633|ref|YP_001512140.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus oremlandii
           OhILAs]
 gi|238065284|sp|A8MLX7|RIMO_ALKOO RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|158139832|gb|ABW18144.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus oremlandii
           OhILAs]
          Length = 438

 Score = 49.3 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 25/161 (15%)

Query: 93  YPDRIL--------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           Y +R+L        LK+   C  +C +C    + G      +  +D       + ++  I
Sbjct: 127 YHNRVLTTGSNMAYLKIGEGCDNHCTYCAIPNIQGPYISRTM--EDILKEARNLAKQ-GI 183

Query: 145 WEVIFTGGD----PL-ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
            E+I    D     L I    RL ++L+ L  I+ ++ +RF      V P+ I  ELI+ 
Sbjct: 184 KELIVIAQDTTKYGLDIYGEARLPQLLEELCKIEDIEWVRF----LYVYPESITDELIKV 239

Query: 200 LKEAGKPV-YIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
           + E  K   Y  I   H    S+  +  ++R  + G  + +
Sbjct: 240 VGENDKICNYFDIPIQH---ISDSVLKRMNR-KSDGASVRN 276


>gi|194336995|ref|YP_002018789.1| nitrogenase cofactor biosynthesis protein NifB [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309472|gb|ACF44172.1| nitrogenase cofactor biosynthesis protein NifB [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 423

 Score = 49.3 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/218 (20%), Positives = 79/218 (36%), Gaps = 50/218 (22%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQE----KSQI 144
           H++  RI L +   C + C +C R+    ++    ++SK      A+ Y+ +       I
Sbjct: 17  HKF-GRIHLPVAPKCNIQCNYCNRKFDCMNENRPGVTSKILSSGQAMHYLDQAMILSPNI 75

Query: 145 WEVIFTG-GDPLILSHKR------------------------LQKVLKTLRY--IKHVQI 177
             V   G GDP     +                         L   +  L    + HV  
Sbjct: 76  AVVGIAGPGDPFANPDETMETLRLVRAKYPEMLLCMATNGLDLAPYIDELAELQVSHV-T 134

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           +  ++  P+     I  E+   ++   K +Y  +  +      ++ + A+ +L  AGI  
Sbjct: 135 ITINAIDPV-----IGSEIYAWVR-HNKKMYRDL--DAAKLLIDKQLEALKKLKAAGITA 186

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELR-----IKPYY 270
              S+++ GIND+  I     R   EL        PYY
Sbjct: 187 KVNSIIIPGINDNHVIEVA--RKVAELGADILNCMPYY 222


>gi|85860740|ref|YP_462942.1| molybdenum cofactor biosynthesis protein A [Syntrophus
           aciditrophicus SB]
 gi|85723831|gb|ABC78774.1| molybdenum cofactor biosynthesis protein A [Syntrophus
           aciditrophicus SB]
          Length = 345

 Score = 49.3 bits (117), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 70/165 (42%), Gaps = 23/165 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + +   C + CR+C   E + S+     VLS +     +  +  +  I +V  TGG+PL+
Sbjct: 33  ISVTDRCNLRCRYCMPEEGIESKLGHEGVLSLEAFARVVR-LAAQVGIRKVRLTGGEPLV 91

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
              + + ++++ +  +  +  +   +   +  P      + + LK AG    + I  +  
Sbjct: 92  --RRNIPQLIRYIADVPQIDDIALTTNGILFAP------MAEELKAAGLN-RVNISLDSF 142

Query: 217 YE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
            E      +     ++A  AI +     +  +   +V+++G NDD
Sbjct: 143 KEDRFRFITRVGNLDQAKKAIFKALELKMNPVKINTVVIRGFNDD 187


>gi|313638470|gb|EFS03650.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri FSL
           S4-171]
          Length = 335

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +       I  K  I +
Sbjct: 11  GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEI-VGFMAIMVKFGIKK 66

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 67  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 118

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +    G   +    VL+KG NDD
Sbjct: 119 RVNISLDSLHADRFQTITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 172


>gi|212223647|ref|YP_002306883.1| Hypothetical molybdenum cofactor biosynthesis protein A
           [Thermococcus onnurineus NA1]
 gi|212008604|gb|ACJ15986.1| Hypothetical molybdenum cofactor biosynthesis protein A
           [Thermococcus onnurineus NA1]
          Length = 419

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 38/199 (19%)

Query: 78  IGDNNHSPL-----KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           I +    PL      G++ R  + I ++ +  C + C FC   E   S+   +    D +
Sbjct: 93  IHEGMDVPLLGYNAFGLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDID 152

Query: 133 AALAYIQEKSQIW----EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
             + +  + +QI     E    G G+PL+   +   ++++ LR   +V+++   S   + 
Sbjct: 153 YLIKWFDDVAQIKGKGLEAHLDGQGEPLLYPFRV--ELVQALREHPNVRVISMQSNGTL- 209

Query: 188 DPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLA 231
               +N  L++ L EAG   V +++H         E    +                 L 
Sbjct: 210 ----LNDRLVEELAEAGLDRVNLSLH-----SLDPEKAKMLMGRKDYDLQHVLDMAEALV 260

Query: 232 NAGIILLSQSVLLKGINDD 250
           NAG+ +L   V++ GIND+
Sbjct: 261 NAGVDVLIAPVIIFGINDN 279


>gi|194334917|ref|YP_002016777.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris
           aestuarii DSM 271]
 gi|194312735|gb|ACF47130.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris
           aestuarii DSM 271]
          Length = 336

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/279 (17%), Positives = 100/279 (35%), Gaps = 57/279 (20%)

Query: 79  GDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAA 134
            +   SPLK +  RY   +    L +   C + C +C R    V + +G  LS  +  + 
Sbjct: 5   HNAVSSPLKPLSDRYRRTVDYVRLAVTSQCNLRCMYCMREEHTVYNPEGEALSGDEIVSM 64

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR----------- 183
           LA +     + +V +TGG+PL+     + ++++  + ++ ++ +   +            
Sbjct: 65  LAVLARM-GVSKVRYTGGEPLLRQD--IVRLVRDAKALEGIETVSLTTNGLLLDRYLDDL 121

Query: 184 ------VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY--EFSEEAIAAISRLANAGI 235
                          +PE  + +    + ++  +H+N     E     +          I
Sbjct: 122 VAAGIDAINFSLDTFDPERYREI--TRRNLFDKVHSNLLRLLECDALLVK---------I 170

Query: 236 ILLSQSVLLKGIN-DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH--FRLTIEEGQK 292
            +L    LL+ +N D+      L R       +P  +   +L     H  +R     G  
Sbjct: 171 NVL----LLRKVNIDEITTFVELTRD------RPVTVRFMELMPFDDHQIWRTGKFMGAD 220

Query: 293 -IVASLKEKIS------GLCQPFYILDLPGGYGKVKIDT 324
            I+ +L           G    ++   LPG  GKV +  
Sbjct: 221 KILETLHACYPDLQPMQGDATEYFSFSLPGYKGKVSVIP 259


>gi|302037249|ref|YP_003797571.1| putative tRNA modifying enzyme, MiaB-like [Candidatus Nitrospira
           defluvii]
 gi|300605313|emb|CBK41646.1| putative tRNA modifying enzyme, MiaB-like [Candidatus Nitrospira
           defluvii]
          Length = 447

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 21/162 (12%)

Query: 31  ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90
           +   + + L   +        P   + +Q  P+ E  +    +RED +       L G  
Sbjct: 101 VGTQFKMNLPDYL------PAPAK-LRKQ--PEPELRHSRTIDREDFV-------LPGTA 144

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           +    R LLK+   C   C FC        ++ +  +      A   +       E++ T
Sbjct: 145 YSDSTRALLKIQDGCDFMCSFCLI-PFARGRERSRTAEDVLREARE-LAAH-GYRELVLT 201

Query: 151 GGDPLILSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQ 190
           G +    S++ L   ++L+ L  +  V  +R  S  P   P 
Sbjct: 202 GVNIGRYSYQGLGLVELLRELESVPDVTRIRISSIEPTTVPA 243


>gi|281413068|ref|YP_003347147.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
 gi|281374171|gb|ADA67733.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
          Length = 317

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 50/221 (22%), Positives = 83/221 (37%), Gaps = 32/221 (14%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI- 156
           +      C   C FC + +  G  K  V S  D    +      S  +E+ F GG     
Sbjct: 6   VFLPYAGCKKRCVFCDQIKATGQTK--VPSLDDIARIIEEYSRTSNEYELGFYGG-TFTG 62

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           LS +++++ L+ ++    V+ +R  +R     P  IN   ++ LK+ G  V      +  
Sbjct: 63  LSEEQMEEYLRFVKGFPVVKSIRVSTR-----PDEINERKLKILKKYGVNVIEVGVQSFL 117

Query: 217 YEF---------SEEAIAAISRLANAGIILLSQSV-LLKGI---NDDPEILANLMRTFVE 263
            E          S+EA  A   +   G +L   SV L+ G+   +   EIL+ L      
Sbjct: 118 DEVLERSKRGYTSKEAERACKLIKKNGFVL---SVHLMVGLPRSDRRGEILSALRTVECG 174

Query: 264 L---RIKPYYLH----HPDLAAGTSHFRLTIEEGQKIVASL 297
               RI P  +        +     +  L +EE   I + L
Sbjct: 175 ADMVRIHPTLVFEGTELHRMMKEKGYTPLDVEEAVDICSDL 215


>gi|197303727|ref|ZP_03168764.1| hypothetical protein RUMLAC_02456 [Ruminococcus lactaris ATCC
           29176]
 gi|197297247|gb|EDY31810.1| hypothetical protein RUMLAC_02456 [Ruminococcus lactaris ATCC
           29176]
          Length = 438

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 23/129 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152
             R  +K+   C  +C +C      G  +    S +D    +  + E     EV+ TG  
Sbjct: 150 HTRAYIKVQDGCNQFCTYCIIPYARGRVRSR--SMEDVTEEVRTLAEN-GYKEVVLTGIH 206

Query: 153 --------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                   D      + L  +++ +  I+ ++ +R  S    ++P  I  E  + + +  
Sbjct: 207 LSSYGIDFD----KERHLLDLIRAVHQIEGIERIRLGS----LEPGIITEEFAEAISKLP 258

Query: 205 KPVYIAIHA 213
           K   +  H 
Sbjct: 259 K---MCPHF 264


>gi|304439566|ref|ZP_07399471.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371945|gb|EFM25546.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 433

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 20/126 (15%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG--- 151
            R  +K+   C  YC +C      G  +   +     E A      ++   E++ TG   
Sbjct: 144 TRSYMKVQDGCNRYCTYCIIPYARGPIRSRTI-EDSVEEAKR--LSEAGYKELVLTGIHI 200

Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                D   L  +RL  +++ +  +  ++ +R  S    ++P  I  + ++ +K  GK  
Sbjct: 201 GSYGKD---LGDERLVDLIEEITKVDGIERIRLSS----IEPITITRDFLERIKATGK-- 251

Query: 208 YIAIHA 213
            +  H 
Sbjct: 252 -VCDHF 256


>gi|153938937|ref|YP_001391265.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum F
           str. Langeland]
 gi|166217247|sp|A7GEQ5|MOAA_CLOBL RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|152934833|gb|ABS40331.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum F
           str. Langeland]
          Length = 319

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 70/164 (42%), Gaps = 22/164 (13%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E +V  +   ++  ++    +        + ++ FTGG+PLIL
Sbjct: 14  VSVTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
               + K++     I  ++ +   +         +  ++++ LK+AG    + I  +   
Sbjct: 73  KD--IDKLIYNTSKINSIKDIAMTTNAI------LLEDMVEELKKAGLK-RVNISLDSLK 123

Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
           E      +      +   +I +  + G+  +   +V++KGINDD
Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMKPIKINTVIMKGINDD 167


>gi|148379902|ref|YP_001254443.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
           str. ATCC 3502]
 gi|153932339|ref|YP_001384199.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
           str. ATCC 19397]
 gi|153937083|ref|YP_001387740.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
           str. Hall]
 gi|226949238|ref|YP_002804329.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
           A2 str. Kyoto]
 gi|166217245|sp|A7FUZ6|MOAA_CLOB1 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|166217246|sp|A5I365|MOAA_CLOBH RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|254811539|sp|C1FPG7|MOAA_CLOBJ RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|148289386|emb|CAL83482.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
           str. ATCC 3502]
 gi|152928383|gb|ABS33883.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
           str. ATCC 19397]
 gi|152932997|gb|ABS38496.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A
           str. Hall]
 gi|226843612|gb|ACO86278.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
           A2 str. Kyoto]
 gi|322806201|emb|CBZ03769.1| molybdenum cofactor biosynthesis protein MoaA [Clostridium
           botulinum H04402 065]
          Length = 319

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 70/164 (42%), Gaps = 22/164 (13%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E +V  +   ++  ++    +        + ++ FTGG+PLIL
Sbjct: 14  VSVTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
               + K++     I  ++ +   +         +  ++++ LK+AG    + I  +   
Sbjct: 73  KD--IDKLIYNTSKINSIKDIAMTTNAI------LLEDMVEELKKAGLK-RVNISLDSLK 123

Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
           E      +      +   +I +  + G+  +   +V++KGINDD
Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMKPIKINTVIMKGINDD 167


>gi|326201371|ref|ZP_08191243.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM
           2782]
 gi|325988939|gb|EGD49763.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM
           2782]
          Length = 436

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 18/128 (14%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF 149
           +   R  LK+   C  +C +C     +       + S+  +  +  ++    S   EV+ 
Sbjct: 140 KERTRAYLKIQEGCSQFCAYC-----IIPYARGPIRSRKPDDIIEEVRQLADSGFLEVVL 194

Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           TG         L    L  +++ +  I  ++ +R  S    ++P  I  E ++      K
Sbjct: 195 TGIHLASYGRELEDTSLLDIIRKIHSIDGIKRIRLGS----IEPTTITKEFVEAAVGLPK 250

Query: 206 PVYIAIHA 213
              +  H 
Sbjct: 251 ---LCPHF 255


>gi|154505328|ref|ZP_02042066.1| hypothetical protein RUMGNA_02843 [Ruminococcus gnavus ATCC 29149]
 gi|153794371|gb|EDN76791.1| hypothetical protein RUMGNA_02843 [Ruminococcus gnavus ATCC 29149]
          Length = 481

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 70/192 (36%), Gaps = 43/192 (22%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           D+ L+     C   C FCF  +M    + T+    D ++ L+++Q       +  T    
Sbjct: 106 DQSLMDEYRSCRNKCMFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YITLT---- 156

Query: 155 LILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIH 212
             +S   +++++K  L  I              +  Q  NPEL  + L           H
Sbjct: 157 -NMSDHDVERIVKYRLEPI-------------NISFQTTNPELRCKML-----------H 191

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
                 F+ EA+  +  L    I +  Q VL KG+ND  E+   +          PY   
Sbjct: 192 ----NRFAGEALKKVDILYRGQIEMNGQIVLCKGVNDGEELERTIRDL---TGYLPYLKS 244

Query: 273 HPDLAAGTSHFR 284
              +  G + +R
Sbjct: 245 VSIVPVGLTKYR 256


>gi|152992605|ref|YP_001358326.1| tRNA modifying enzyme [Sulfurovum sp. NBC37-1]
 gi|151424466|dbj|BAF71969.1| tRNA modifying enzyme [Sulfurovum sp. NBC37-1]
          Length = 417

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 18/124 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C   C +C     + + +G   S ++ E  L  I+    +   E I TG
Sbjct: 135 KSRAFIKIQEGCDFRCSYCI----IPAVRGNARSHRE-ETILEQIRKLAANGFGEFILTG 189

Query: 152 GDPLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            +           + K+LK +  I+ V+ +R  S  P+    +I+ E ++ L E     +
Sbjct: 190 TNVGSYGRDHDTSMAKLLKKMSMIRGVRRIRIGSLEPV----QIDDEFMELLSEP----W 241

Query: 209 IAIH 212
           +A H
Sbjct: 242 MAKH 245


>gi|239627307|ref|ZP_04670338.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517453|gb|EEQ57319.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 474

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 41/188 (21%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+           Y ++      + F  G+ + L
Sbjct: 85  LMSDYRSCSNKCIFCFIDQMPPGMRDTL-----------YFKDDDS--RLSFLQGNYITL 131

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           ++ + + +          +I+R       +  Q  NPEL  + L                
Sbjct: 132 TNMKERDI---------ERIIRMQLAPINISVQTTNPELRCKMLN--------------- 167

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             F+ E +  +  L +  + +  Q V  K +ND  E+   +       R  P+      +
Sbjct: 168 NRFAGEKLKYLQMLYDGHVEMNGQVVCCKNVNDGAELERTMDDL---ARYLPFLRSVSVV 224

Query: 277 AAGTSHFR 284
            AG + FR
Sbjct: 225 PAGITRFR 232


>gi|15895263|ref|NP_348612.1| molybdenum cofactor biosynthesis protein MoaA [Clostridium
           acetobutylicum ATCC 824]
 gi|24212002|sp|Q97HL8|MOAA_CLOAB RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|15024974|gb|AAK79952.1|AE007703_7 Molybdenum cofactor biosynthesis enzyme MoaA, Fe-S oxidoreductase
           [Clostridium acetobutylicum ATCC 824]
 gi|325509409|gb|ADZ21045.1| Molybdenum cofactor biosynthesis enzyme MoaA, Fe-S oxidoreductase
           [Clostridium acetobutylicum EA 2018]
          Length = 318

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 80/211 (37%), Gaps = 38/211 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C  +     Q+   +S  D    L        I +V +TGG+PL+  
Sbjct: 14  ISVTDRCNLRCIYCMPKMKGYIQENNKISCSDIFKLLRA-AVSVGINKVRYTGGEPLL-- 70

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA------- 210
           ++ + K++     +  +  +   +   +  PQ     + + LK+AG K V I+       
Sbjct: 71  NEEISKIIYETSKLPQINDIAITTNGIL-LPQ-----MAKDLKKAGLKRVNISLDTLKSD 124

Query: 211 --IHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIND-DPEILANLMRTF-VELR 265
                 +  + ++  I  I       +  +   +VL+KGIND +     NL R   VE+R
Sbjct: 125 TFTKITNFNQITK-VIDGIDTCLKLNLKPVKINTVLIKGINDLEVNDFVNLSREMPVEIR 183

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
                     +          I EG KI   
Sbjct: 184 ------FIELM---------PIGEGAKIYEK 199


>gi|300856502|ref|YP_003781486.1| putative molybdenum cofactor biosynthesis protein A [Clostridium
           ljungdahlii DSM 13528]
 gi|300436617|gb|ADK16384.1| predicted molybdenum cofactor biosynthesis protein A [Clostridium
           ljungdahlii DSM 13528]
          Length = 322

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 20/163 (12%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C  +E +V    G +L  +D    +        I ++ +TGG+PLI+
Sbjct: 14  ISLTDRCNLRCIYCMPKEGIVKRPYGDLLRFEDILKIIKA-AATLGINKIRYTGGEPLIM 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
               ++ +++    IK +  +   +   ++       ++   LKEAG K V I++     
Sbjct: 73  KD--IEYLIRETANIKGITDVAITTNGILLC------DMADKLKEAGLKRVNISLDTLKA 124

Query: 217 YE---FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
            +    +     +  + +I +  + G+  +   +VLLKG ND 
Sbjct: 125 DKYKFITRCGNLDAVLKSIDKCLSIGLTPVKINTVLLKGFNDT 167


>gi|116872442|ref|YP_849223.1| molybdenum cofactor biosynthesis protein A [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|123466165|sp|A0AHG0|MOAA_LISW6 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|116741320|emb|CAK20442.1| molybdenum cofactor biosynthesis protein A [Listeria welshimeri
           serovar 6b str. SLCC5334]
          Length = 333

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 74/191 (38%), Gaps = 23/191 (12%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  + +   I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFMELMVQF-GIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDDPEILAN 256
            V I++ + H   F               I +    G   +    VL+KG NDD      
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDFL 176

Query: 257 LMRTFVELRIK 267
                 ++ I+
Sbjct: 177 KFTKDKDINIR 187


>gi|297544398|ref|YP_003676700.1| MiaB-like tRNA modifying protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296842173|gb|ADH60689.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 449

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 21/121 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  YC +C     +       + S++ E  L  ++    S   E++ TG
Sbjct: 155 RTRAYVKIQDGCNQYCTYC-----IIPYARGPVRSREPEKILEEVKRFADSGYKEIVLTG 209

Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                   D   L +  L  ++K +  I  ++ +R  S  P+        E ++ + +  
Sbjct: 210 IHIASYGKD---LKNIGLLDIIKRIHEIDGIKRIRLSSIEPVFL----TEEFVKEIAKLP 262

Query: 205 K 205
           K
Sbjct: 263 K 263


>gi|152990825|ref|YP_001356547.1| tRNA modifying enzyme [Nitratiruptor sp. SB155-2]
 gi|151422686|dbj|BAF70190.1| tRNA modifying enzyme [Nitratiruptor sp. SB155-2]
          Length = 410

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 18/124 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
             R  +K+   C   C +C    + G+ +     L  +  +         +   E I TG
Sbjct: 129 KSRAFIKIQEGCDFRCSYCIIPYVRGNARSMDESLILEQIQKL-----ASNGFGEFILTG 183

Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            +           L K+LK +  I+ V+ +R  S    ++P +I  E  + L E     +
Sbjct: 184 TNVGSYGKDKDTSLAKLLKKIAMIRGVRRIRLGS----IEPIQITDEFKEILDEP----W 235

Query: 209 IAIH 212
           +A H
Sbjct: 236 MAKH 239


>gi|251798581|ref|YP_003013312.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
           JDR-2]
 gi|247546207|gb|ACT03226.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
           JDR-2]
          Length = 333

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 33/179 (18%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI------QEK 141
           G  H Y   + + +   C + C +C        ++G   +      +  +I        +
Sbjct: 9   GREHDY---LRISVTDRCNLRCLYCM------PEEGMEFADASHLLSYDHIVEVVQTAAE 59

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
             I ++  TGG+PLI     L  +++ L+ I  ++ +   +   ++          + LK
Sbjct: 60  LGITKLRITGGEPLIRPD--LDSLIRRLKAIPGIEDIALTTNGMLLGKY------AEALK 111

Query: 202 EAGKP-VYIAIHANHPYEF-----SEEAIAAISRLANAG----IILLSQSVLLKGINDD 250
            AG   V I++    P  F       E    I  +  AG      +    VLLKGIN+D
Sbjct: 112 AAGLNRVNISLDTLDPARFKFIARRGELKRVIEGIEAAGRAGLAPIKLNCVLLKGINED 170


>gi|242278011|ref|YP_002990140.1| radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
 gi|242120905|gb|ACS78601.1| Radical SAM domain protein [Desulfovibrio salexigens DSM 2638]
          Length = 343

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 43/228 (18%), Positives = 80/228 (35%), Gaps = 50/228 (21%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
              L+L  VC + C +C+     G +    L  ++   A+   ++      +I  GG+P+
Sbjct: 27  TAELELSRVCDLRCIYCYAS--SGEKLNNELDFEEITDAVDQCRDLGARKIIILGGGEPM 84

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRF-----HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           +       +++  +RYI H   L        +        RI PE+   L   G    I 
Sbjct: 85  LYP-----RIMDVIRYI-HELGLEIELFSNGT--------RITPEIASELYSMGVQPVIK 130

Query: 211 IHANHPYEFSE----------EAIAAISR----LANAG-----IILLSQSVLLKGINDDP 251
              N                 +A  AI +    L  AG     I + +Q+++ +    + 
Sbjct: 131 --FN---SLDPQIQDMLAGKKDAHKAIRQGLNNLLEAGYSKGDIPIGAQTIICRQ---NY 182

Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI--EEGQKIVASL 297
             +  + R     +I PY+    D      H  L +  E+  ++   L
Sbjct: 183 AEIPEMWRWLRTRKIIPYFETITDQGRAKDHMELALNPEQIGELFDEL 230


>gi|91203193|emb|CAJ72832.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 447

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 60/168 (35%), Gaps = 22/168 (13%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           +DP   Q       L      ++D I   N S   G       R  LK+   C +YC +C
Sbjct: 118 DDPCIPQITSLPPYLLQNNTFQKDSIYRLNISRFHG-----HTRAFLKIEDGCDMYCSYC 172

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI----LSHKR-LQKV 165
                +       + S+  +      +    +   E++ TG         +S    L K+
Sbjct: 173 -----IIPYVRGAIKSRKWQDIHDEAKRLIHNGYKEIVLTGIHLGAYGKEMSDGISLVKI 227

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           L+ L     +  +R  S + + +   I PEL+  + E  K +   +H 
Sbjct: 228 LERLSEFSGLGRIRL-SSIEVNE---ITPELMHLIAE-RKTICPHLHI 270


>gi|29840033|ref|NP_829139.1| MiaB-like tRNA modifying enzyme [Chlamydophila caviae GPIC]
 gi|29834380|gb|AAP05017.1| MiaB-like tRNA modifying enzyme [Chlamydophila caviae GPIC]
          Length = 421

 Score = 48.9 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 17/126 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  +K+   C  +C +C    + G  +     S+  +  L  I         EV+  G
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSR-----SRPIQEILDEISGLVSQGYQEVVIAG 188

Query: 152 GDPLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
            +      +   L  +++ +  IK ++ +R  S    +DP+ +  +L   L         
Sbjct: 189 INVGDYQDEGKSLAHLIRQVDEIKGIERIRISS----IDPEDVQEDLRDVLLSGRHTC-- 242

Query: 210 AIHANH 215
             H++H
Sbjct: 243 --HSSH 246


>gi|302670902|ref|YP_003830862.1| Fe-S oxidoreductase [Butyrivibrio proteoclasticus B316]
 gi|302395375|gb|ADL34280.1| Fe-S oxidoreductase [Butyrivibrio proteoclasticus B316]
          Length = 458

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 40/155 (25%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       V  T      +
Sbjct: 90  LMDDYRSCSNKCIFCFIDQMPKGMRKTLYFKDD-DSRLSFLQGN----YVTLT-----NM 139

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           S K + ++LK            +H     +  Q  NPEL  + L                
Sbjct: 140 SDKDIDRILK------------YHLSPINISFQTTNPELRCKMLG--------------- 172

Query: 217 YEFSEEAIAAISRLAN--AGIILLSQSVLLKGIND 249
             F+ EA+  + RL     GI +  Q VL KG+ND
Sbjct: 173 NRFAGEALKKVDRLCAPGTGIEINGQIVLCKGVND 207


>gi|193212999|ref|YP_001998952.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum
           NCIB 8327]
 gi|193086476|gb|ACF11752.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum
           NCIB 8327]
          Length = 333

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 73/163 (44%), Gaps = 13/163 (7%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           D + + +   C + C +C + E    +K   L +  T A +  + +   I +V FTGG+P
Sbjct: 21  DYVRIAVTSACNLRCTYCLKNEEDADRKIDQLDADQTVAVIEVLAQM-GIRKVRFTGGEP 79

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HA 213
           L+     + ++++  +    +  ++F +   ++   R   ELI    + G  + +    A
Sbjct: 80  LLHPD--IVELVRRAKATPGIDTVKFTTNGILL--DRYLDELIAAGLD-GINLSLDTLDA 134

Query: 214 NHPYEFS-----EEAIAAISRLAN-AGIILLSQSVLLKGINDD 250
               + +         AA+ RL +   + +   +++L+GIN+D
Sbjct: 135 QKYRDITRRDRFASVRAALDRLLDIPDMSVKINTLMLRGINND 177


>gi|289550128|ref|YP_003471032.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus
           lugdunensis HKU09-01]
 gi|315659242|ref|ZP_07912106.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           lugdunensis M23590]
 gi|289179660|gb|ADC86905.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus
           lugdunensis HKU09-01]
 gi|315495667|gb|EFU83998.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           lugdunensis M23590]
          Length = 340

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 40/175 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G       K  +L+ ++ E  +A I  +  + ++  TGG+
Sbjct: 18  ISVTDRCNFRCDYCMPKEIFGDDFVFLPKDELLTFEEIER-IAEIYAELGVKKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPEL 196
           PL+   + L +++  L  I+ ++ +                     R   V    I+  +
Sbjct: 77  PLL--RRNLYQLIARLNKIEGIEDIGLTTNGLLLKKHGLKLFEAGLRRINVSLDAIDNSV 134

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250
            Q +                     E I   I+     G  +    V+ KG+NDD
Sbjct: 135 FQAINNRN--------------IKAETILDQINYAIAIGFHVKVNVVIQKGVNDD 175


>gi|194016213|ref|ZP_03054827.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus ATCC
           7061]
 gi|194011686|gb|EDW21254.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus ATCC
           7061]
          Length = 305

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 24/142 (16%)

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            K  +LS ++ E       +   + ++  TGG+PL+     L  +++ L  I  ++ +  
Sbjct: 14  NKEELLSFEEIEQLATLFAKDLGVVKIRITGGEPLMRKD--LPILIEKLSKIPGIEDIAM 71

Query: 181 ---HSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPYEFS---------EEAIAAI 227
               + +P+           + LK+AG   V I++ + +P  F          ++    I
Sbjct: 72  TTNGTLLPVY---------AEKLKKAGLQRVTISLDSLNPDRFKQMNGRNISIQKVFDGI 122

Query: 228 SRLANAGIILLSQSVLLKGIND 249
                AG+ +    V+ KG+ND
Sbjct: 123 EAAKKAGLAIKINMVVQKGVND 144


>gi|289550653|ref|YP_003471557.1| MiaB family protein [Staphylococcus lugdunensis HKU09-01]
 gi|289180185|gb|ADC87430.1| MiaB family protein [Staphylococcus lugdunensis HKU09-01]
          Length = 448

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   +   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKKVVEQATTLV--NAGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  I  ++ +R  S    ++  ++  E+I  ++++ K 
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLETIDGLERIRISS----IEASQLTDEVIDVIEKSNK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|291549892|emb|CBL26154.1| MiaB-like tRNA modifying enzyme [Ruminococcus torques L2-14]
          Length = 450

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 27/131 (20%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  +C +C     +       + S+  E  L  ++    +   EV+ TG
Sbjct: 162 HTRAYIKVQDGCNQFCTYC-----IIPYARGRVRSRSMEDVLDEVRTLADNGYKEVVLTG 216

Query: 152 G---------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
                     D        L ++++ +  I  ++ +R  S    ++P  I  E  + + +
Sbjct: 217 IHLSSYGIDFD----KEYHLLELIRAVHEIDGIERIRLGS----LEPGIITEEFAEGIAK 268

Query: 203 AGKPVYIAIHA 213
             K   +  H 
Sbjct: 269 LPK---MCPHF 276


>gi|237807379|ref|YP_002891819.1| nitrogenase cofactor biosynthesis protein NifB [Tolumonas auensis
           DSM 9187]
 gi|237499640|gb|ACQ92233.1| nitrogenase cofactor biosynthesis protein NifB [Tolumonas auensis
           DSM 9187]
          Length = 476

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 49/258 (18%), Positives = 93/258 (36%), Gaps = 49/258 (18%)

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQE 140
               H+Y  R+ L +   C V C +C R+         G     +   +  + A A    
Sbjct: 46  PSAHHKYA-RMHLAVAPACNVQCHYCNRKYDCSNESRPGVVSELLNVEQALQKARAVAAA 104

Query: 141 KSQIWEVIFTG-GDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQ 198
             Q+  +   G GDPL    +     L+ LR  +  V++    +      PQ ++  L++
Sbjct: 105 IPQLSVIGIAGPGDPLANQTRTFDT-LEGLRSALPDVKLC-VSTNGLA-LPQSVDS-LVE 160

Query: 199 CLKEAGKPVYIA---IHANH------------------PYEFSEEAIAAISRLANAGIIL 237
            L      + +     H +                        ++ I  + +L   G+++
Sbjct: 161 -LGVDHVTITMNAIDAHVSAGIYDWIYFDGVRYRGKEGAQILIDQQIEGMRKLMENGVLV 219

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE--G 290
              SVL+ G+ND    L+ +     ++      I P          GT H+ L+ +    
Sbjct: 220 KINSVLIPGVND--LHLSEVSHAIRDMGAFLHNIMPL---ISKPEHGT-HYGLSGQREPT 273

Query: 291 QKIVASLKEKISGLCQPF 308
            + VA ++E+ SG+  P 
Sbjct: 274 PEEVAQVRER-SGVFMPQ 290


>gi|262039459|ref|ZP_06012763.1| protein YqeV [Leptotrichia goodfellowii F0264]
 gi|261746526|gb|EEY34061.1| protein YqeV [Leptotrichia goodfellowii F0264]
          Length = 453

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 60/149 (40%), Gaps = 14/149 (9%)

Query: 72  EEREDPI-GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
             + D I  +  +S  K  + R   R  +K+   C  +C +C      G  +    +++ 
Sbjct: 134 HYQVDNIFDEKEYSSNKYTILREKARAFVKIQDGCSKFCSYCKIPYARGLSRSR--ATEH 191

Query: 131 TEAALAYIQEKSQIWEVIFTGGD----PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVP 185
               + Y+ E+    EV+ TG +     L L  K     +L+ +  +K V+ +R  S   
Sbjct: 192 VLEEINYLGEQ-GYKEVVLTGINMSEYGLDLEPKTDFDTLLEKILAVKSVERVRVSS--- 247

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHAN 214
            V P  I  + +  LK   K +   +H +
Sbjct: 248 -VYPDTITDKFLGMLKNNPK-LMPHLHVS 274


>gi|253574226|ref|ZP_04851568.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251846703|gb|EES74709.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 335

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 22/171 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIF 149
           R  D + + +   C + C +C   E MV      ++S ++    ++ +      + ++  
Sbjct: 10  RKHDYLRISVTDRCNLRCVYCMPAEGMVFQPHEEIMSYEEIAETVSAL--TPMGLRKIRL 67

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
           TGG+PL+     L++++  L  I  ++ +   +            +  + LK+AG K V 
Sbjct: 68  TGGEPLVRKD--LEQLVAMLSSIPGIEDIALTTNG------MFLAKKAELLKQAGLKRVN 119

Query: 209 IAIHANHPYEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDD 250
           I++ +     F+              I      G   +    VL+KGIN+D
Sbjct: 120 ISLDSLRQDRFAMITRGGEVEKVLEGIQAAVEVGFEPIKLNVVLMKGINED 170


>gi|193214740|ref|YP_001995939.1| nitrogenase cofactor biosynthesis protein NifB [Chloroherpeton
           thalassium ATCC 35110]
 gi|193088217|gb|ACF13492.1| nitrogenase cofactor biosynthesis protein NifB [Chloroherpeton
           thalassium ATCC 35110]
          Length = 423

 Score = 48.6 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 73/218 (33%), Gaps = 57/218 (26%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE----KSQIWEVI 148
            RI L +   C + C FC R+    ++    ++SK    E A+ Y+         I  V 
Sbjct: 20  GRIHLPVAPKCNIQCNFCNRKFDCLNENRPGVTSKVLSPEQAVHYLGNALEISPNIAVVG 79

Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILR---------FHSRVPIVDPQRINPELIQ 198
             G GDP     +           +K ++++R           +    V P     EL +
Sbjct: 80  IAGPGDPFANPDET----------MKTLRLVREKYPEMLLCVATNGLNVLPY--IDELAE 127

Query: 199 CLKEAGKPVYIAI-----------HANHPYEF--SEEAIA--------AISRLANAGIIL 237
            L+ +   + I                H       E+A          A+ +L   GI  
Sbjct: 128 -LQVSHVTITINAVSPKVGAEVYAWVRHQKRVLRDEQAAETLLENQLAALKKLKEKGITA 186

Query: 238 LSQSVLLKGINDD-----PEILANLMRTFVELRIKPYY 270
              ++++ GIND       + ++ L    +     PYY
Sbjct: 187 KVNTIIIPGINDHHVLEVAKTVSELGADILNT--LPYY 222


>gi|313888926|ref|ZP_07822586.1| tRNA methylthiotransferase YqeV [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845099|gb|EFR32500.1| tRNA methylthiotransferase YqeV [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 432

 Score = 48.6 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 18/126 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  +C +C     +       + S+  E ++   +        E++ TG
Sbjct: 143 RTRAYMKVQDGCNRFCTYC-----IIPFARGPIRSRTIEDSVREARTLADRGFKEIVLTG 197

Query: 152 GD----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                  + L   RL  +++ +  +  ++ +R  S    V+P  I  + ++   + GK  
Sbjct: 198 IHIGSFGMDLGDMRLIDLIEAIAEVDGIERIRLSS----VEPIIITDDFMERAVKTGK-- 251

Query: 208 YIAIHA 213
            +  H 
Sbjct: 252 -LCDHF 256


>gi|307570581|emb|CAR83760.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           L99]
          Length = 333

 Score = 48.6 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  +  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116

Query: 206 PVYI---AIHANHPYEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDD 250
            V I   ++HA+H    +     ++ +  I +    G   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHADHFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170


>gi|313669401|ref|YP_004049828.1| GTP cyclohydrolase subunit MoaA [Sulfuricurvum kujiense DSM 16994]
 gi|313156598|gb|ADR35275.1| GTP cyclohydrolase subunit MoaA [Sulfuricurvum kujiense DSM 16994]
          Length = 321

 Score = 48.6 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 29/167 (17%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C   CR+C   +      K  +LS ++  A +  I   + I ++  TGG+P   
Sbjct: 15  VSVTERCNFRCRYCMAEKPFSWVPKENLLSYEELFAFIK-IGIDNGIQKIRLTGGEP--T 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----PELIQCLKEAG-KPVYIAI 211
           + + L +++              HS  P VD          P L   LK+AG + V I++
Sbjct: 72  TRENLDELIAM-----------IHSYAPDVDIGLTTNGYLLPSLAHKLKKAGLRRVNISL 120

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   H     +   E +  I     AG+ +   SV+L+ IN++
Sbjct: 121 DSLDRNTLHYIAQKDVLPEILQGIEAAVEAGLSVKINSVILRNINEN 167


>gi|329731179|gb|EGG67549.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis VCU144]
 gi|329735413|gb|EGG71704.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis VCU028]
          Length = 340

 Score = 48.6 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 69/174 (39%), Gaps = 38/174 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G       K  +L+ ++    ++ I  +  + ++  TGG+
Sbjct: 18  ISVTDRCNFRCDYCMPKEIFGDDYTFLPKNELLTFEELTR-ISKIYAQLGVKKIRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+   + L K+++ L  I  ++ +   +                 LK+ GK +Y     
Sbjct: 77  PLL--RRNLYKLVEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLYQAGLR 121

Query: 209 -IAIHA-----NHPYEFSEEAIAAISRL------ANAGIILLSQSVLLKGINDD 250
            I +       N   E +   I A + L       + G  +    V+ KG+NDD
Sbjct: 122 RINVSLDAIEDNVFQEINNRNIKASTILEQIDYAVSIGFEVKVNVVIQKGVNDD 175


>gi|150015722|ref|YP_001307976.1| MiaB-like tRNA modifying enzyme [Clostridium beijerinckii NCIMB
           8052]
 gi|149902187|gb|ABR33020.1| MiaB-like tRNA modifying enzyme [Clostridium beijerinckii NCIMB
           8052]
          Length = 432

 Score = 48.6 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 20/121 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFT- 150
             R  LK+   C  +C +C               SKD +  L  I+  S+    E+I + 
Sbjct: 139 KTRAFLKIQDGCNRFCAYCLI-----PYTRGTTCSKDPQKVLDEIKNLSEHGFKEIILSG 193

Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                 G D  +  +  L  +L+ +  +  ++ +R  S    ++P     E+I+ +K+  
Sbjct: 194 IHTASYGVD--LDGNVTLITLLEEIEKLDGIERVRIGS----IEPSFFTDEVIEKMKKMK 247

Query: 205 K 205
           K
Sbjct: 248 K 248


>gi|119356568|ref|YP_911212.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeobacteroides DSM
           266]
 gi|119353917|gb|ABL64788.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeobacteroides DSM
           266]
          Length = 333

 Score = 48.6 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 17/180 (9%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            R+ +   + +   C + C +C R      +     LSS++    +  +     I ++ F
Sbjct: 16  QRHIEYARIAVTAHCNLRCTYCMREEHEYHTIADPELSSREVGKIIVALAS-IGIKKIRF 74

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC--------LK 201
           TGG+PL+     +  +++  + I  ++ +   +   ++   R   ELI          L 
Sbjct: 75  TGGEPLLRKD--ISVLVRQAKSIAGIKTVSLTTNGILL--DRHLDELIDAGLDAINLSLD 130

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRT 260
              +  Y+A       EF        + LA A   +    V+++G+N D+ +    L RT
Sbjct: 131 TLDRERYLA--ITRRNEFDRVMSNLETLLAKATFPVKLNVVMMRGVNGDEIKDFIELTRT 188


>gi|332830635|gb|EGK03241.1| nitrogenase cofactor biosynthesis protein NifB [Dysgonomonas gadei
           ATCC BAA-286]
          Length = 420

 Score = 48.6 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/267 (18%), Positives = 86/267 (32%), Gaps = 80/267 (29%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEK----SQI 144
           H+Y  R+ L +   C + C +C R+    ++    ++S       ++ Y++        I
Sbjct: 16  HKYA-RVHLPVAPKCNIQCNYCNRKYDCCNESRPGVTSTILSPLQSVHYMKALSEKIPNI 74

Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
             V   G GDP   + + L             Q +R          Q+  P+LI CL   
Sbjct: 75  SVVGIAGPGDPFANAEETL-------------QTMRLA--------QKEFPDLIFCLSSN 113

Query: 204 GKPVYI---------AIHAN-HPYEFSEEAIAAI-------------------------- 227
           G  +             H        + E +A I                          
Sbjct: 114 GLDLAPYIDEIAEIGVSHVTITVNSLNPETLAKIYRWVRYKRRVYRGEEGAKVLLEQQLY 173

Query: 228 --SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGT 280
              +L    I +   +V+  GIND    + +L +   EL        P Y         T
Sbjct: 174 CIQKLKEKNITVKINTVICPGIND--HEIEDLAKKVAELGADTMNCIPMY-----PTENT 226

Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQP 307
             F +  E  ++++  +K +IS   +P
Sbjct: 227 E-FEILKEPSKEMMKDIKARISKYIKP 252


>gi|312376680|gb|EFR23697.1| hypothetical protein AND_12429 [Anopheles darlingi]
          Length = 708

 Score = 48.6 bits (115), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 33/176 (18%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R+   + + L   C + C++C   E V  +QK  +L+S++             + ++  T
Sbjct: 183 RFHTYLRISLTERCNLRCKYCMPAEGVQLTQKDKLLTSEEVIRLANLFVA-EGVRKIRLT 241

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P +     L +++  L+ I +++ +   +   +     +  +L+  L  AG    + 
Sbjct: 242 GGEPTVRKD--LPEIVSQLKAIPNLESVGITTNGLM-----LTRQLV-GLHRAGLD-ALN 292

Query: 211 IHANHPYEFSEEAIAAISRLAN--------AGIILLSQ--------SVLLKGINDD 250
           +            +A   ++          AGI L SQ         VL+KG NDD
Sbjct: 293 V------SLDTLKVARYEQITRRKGWERVIAGIDLASQLGYRPKVNCVLMKGFNDD 342


>gi|115360432|ref|YP_777569.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           AMMD]
 gi|115285760|gb|ABI91235.1| GTP cyclohydrolase subunit MoaA [Burkholderia ambifaria AMMD]
          Length = 372

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/248 (20%), Positives = 91/248 (36%), Gaps = 61/248 (24%)

Query: 85  PLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE-- 140
           PL  +    P R L L ++  C   C +C  R+  G     + SS+    A L  I    
Sbjct: 31  PLDTLAR--PLRDLRLSVIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAF 88

Query: 141 -KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----KHVQI---------------LR 179
               + ++  TGG+PL+   + L+ +++ L  +     K V+I               LR
Sbjct: 89  ISLGVEKIRLTGGEPLL--RRNLEALIERLATLTTLDGKPVEIALTTNGSLLAAKARSLR 146

Query: 180 FH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-II 236
               SRV +     I+  + + + +A  PV   +             A I     AG   
Sbjct: 147 DAGLSRVTVSL-DAIDDAVFRRMSDADVPVARVL-------------AGIEAAQAAGLAP 192

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIE 288
           +   +V+ +G+NDD   +  L+R F    +      Y         G S +     +   
Sbjct: 193 VKVNAVIERGVNDD--QILPLVRHFRHSGVAVRFIEY-----MDVGGASAWSGDKVVPAT 245

Query: 289 EGQKIVAS 296
             ++++ +
Sbjct: 246 RMRELIEA 253


>gi|308070127|ref|YP_003871732.1| molybdenum cofactor biosynthesis protein A [Paenibacillus polymyxa
           E681]
 gi|305859406|gb|ADM71194.1| Molybdenum cofactor biosynthesis protein A [Paenibacillus polymyxa
           E681]
          Length = 338

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 57/175 (32%), Gaps = 40/175 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G       +   LS ++             + ++  TGG+
Sbjct: 19  ISVTDRCNFRCSYCMPKEIFGDDYAFLPQNECLSFEEIHRLTKLFVS-LGVKKIRLTGGE 77

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPEL 196
           PL+   + L  ++  +  I  V+ +                     R   V    + PEL
Sbjct: 78  PLM--RRNLPDLVSQILSIDGVEDIGLTTNGVLLGQQAKPLYDAGLRRLNVSLDALAPEL 135

Query: 197 IQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
              L   G KP +I     +  E               G  +    V+ KG+ND 
Sbjct: 136 FGRLNGRGIKPDFILKQIEYAREI--------------GFEIKVNMVVQKGVNDS 176


>gi|256371930|ref|YP_003109754.1| Radical SAM domain protein [Acidimicrobium ferrooxidans DSM 10331]
 gi|256008514|gb|ACU54081.1| Radical SAM domain protein [Acidimicrobium ferrooxidans DSM 10331]
          Length = 375

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 22/179 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGG 152
           P  +L +    CP+ C  C R   + +     L++ +  A +  +   +    VI FTGG
Sbjct: 18  PRLVLWETTQACPLACVHC-RANAISTPDPDELTTAEGFALIDDLAAVAGPRPVIVFTGG 76

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           DPL      L  +        HV +       P V  +RI P  +  L +AG    I+I 
Sbjct: 77  DPLS-RPDLLDLIAHAAARGLHVAV------SPAVS-ERITPATLTALYDAGAR-AISIS 127

Query: 213 A-----NH--PYEFSEEA---IAAISRLANAGIIL-LSQSVLLKGINDDPEILANLMRT 260
                 NH         A   + A++   + G+ + ++ +V+   +ND P +   ++  
Sbjct: 128 LDGLGRNHDATRRVPGHALRTLEALTMARSVGLRVQVNTTVMRTTVNDLPAVAEAMLAR 186


>gi|256827121|ref|YP_003151080.1| Fe-S oxidoreductase [Cryptobacterium curtum DSM 15641]
 gi|256583264|gb|ACU94398.1| Fe-S oxidoreductase [Cryptobacterium curtum DSM 15641]
          Length = 455

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 42/179 (23%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            + +   +  C   C FCF    +     + L+ +D +  L+++Q       V FT    
Sbjct: 80  SKAIFDEVIQCRNACMFCF-MRQLPDDVRSSLTLRDDDFRLSFLQG----TFVTFT---- 130

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
             L+     ++++      H+  LR+           + PE+ + +      V I     
Sbjct: 131 -NLTPADEARIIEQ-----HISPLRYSLHA-------VTPEVRRRMIGPRASVGI----- 172

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM-----RTFVELRIKP 268
                      A  RL  AGI L +Q VL+ G+ND  E+   L           + I P
Sbjct: 173 ----------EAAERLLQAGIELHAQIVLMPGVNDGAELAQTLSWAWKHEGIRSVGIVP 221


>gi|219668949|ref|YP_002459384.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
 gi|219539209|gb|ACL20948.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
          Length = 440

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 12/174 (6%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
             + + +  +C   C FCF       +  T            +++   ++  +  TGG+P
Sbjct: 89  GTVTMYVSLMCHRNCYFCFNPNQEDYEHFTHNKRDLVSELTQHLKHGPKLTHLALTGGEP 148

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA 213
           L+   + L      L   K  +    H+R        ++ E++Q LK+AG   +  +I  
Sbjct: 149 LLHKKEMLDFF--RLAKEKSPKT---HTR-LYTSGDFLDREILQDLKDAGLSEIRFSIKM 202

Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRI 266
             P    +E    I+ L+   I  ++ +  +L G       +  ++     + I
Sbjct: 203 EDPERLKQEVYERIA-LSKEFIPDVMVEMPVLPG---SFAEMKEVLLELDRIGI 252


>gi|89894518|ref|YP_518005.1| hypothetical protein DSY1772 [Desulfitobacterium hafniense Y51]
 gi|89333966|dbj|BAE83561.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 440

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 12/174 (6%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
             + + +  +C   C FCF       +  T            +++   ++  +  TGG+P
Sbjct: 89  GTVTMYVSLMCHRNCYFCFNPNQEDYEHFTHNKRDLVSELTQHLKHGPKLTHLALTGGEP 148

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA 213
           L+   + L      L   K  +    H+R        ++ E++Q LK+AG   +  +I  
Sbjct: 149 LLHKKEMLDFF--RLAKEKSPKT---HTR-LYTSGDFLDREILQDLKDAGLSEIRFSIKM 202

Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRI 266
             P    +E    I+ L+   I  ++ +  +L G       +  ++     + I
Sbjct: 203 EDPERLKQEVYERIA-LSKEFIPDVMVEMPVLPG---SFAEMKEVLLELDRIGI 252


>gi|315649901|ref|ZP_07902983.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex
           V453]
 gi|315274700|gb|EFU38082.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex
           V453]
          Length = 334

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E M       ++S ++  A L  +     + +
Sbjct: 10  GRVHDY---IRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAILRVLAPM-GVSK 65

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+     L+ +++ +  I+ +Q +   +         + P   + LKEAG  
Sbjct: 66  VRLTGGEPLVRKD--LENLVRMIASIEGIQDISLTTNGI------MLPSKARLLKEAGLT 117

Query: 206 --PVYI-AIHANHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
              + + ++H       +      + +  I     AG+  +    VL+KG N+D
Sbjct: 118 RINISLDSLHEERYARITRGGHVSKVLEGIEAAYEAGLDPIKLNMVLMKGFNED 171


>gi|92112102|gb|ABE73736.1| putative Fe-S oxidoreductase [Azoarcus communis]
          Length = 359

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 28/166 (16%)

Query: 95  DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVI 148
           D ++L +   C    C FC   EM  + +    +  + +  L  I+   +     +  V 
Sbjct: 81  DSLILPVTDGCSWNKCTFC---EMYTAPQKAFRARGE-DEVLESIRRTGERYGNQVRRVF 136

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQCLKEAGKPV 207
              GD L+L  +RL   L+ +R  +H+  + R  S     +  R     ++ L EAG  +
Sbjct: 137 LADGDALVLPTRRLLSYLEAIR--EHLPAVHRVSSYCLARNLARKTVAELRTLAEAGLKL 194

Query: 208 Y----------IAIHANHPYEFSEEAIAAISRLANAGI----ILLS 239
                      +    N   E  E   AA+ +L  AGI    ++L+
Sbjct: 195 AYLGAESGDDEVLARVN-KGETFESTRAALDKLGEAGISRSVMILN 239


>gi|300817404|ref|ZP_07097621.1| radical SAM domain protein [Escherichia coli MS 107-1]
 gi|300530030|gb|EFK51092.1| radical SAM domain protein [Escherichia coli MS 107-1]
          Length = 372

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 14/126 (11%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMV---GSQKGTVLSSKDTEAALAYIQEKSQIWE----V 147
           D IL+K    C + C +C+           +   ++    E  +  I E S + E    +
Sbjct: 3   DTILIKTASRCNLDCTYCYVYRGADTSWQDQPYRMNDATIEKVVERITEYSLLQETGFAI 62

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQI--LRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +  GG+PL+L  +RL+ +L  LR + + Q   +   +   +     I  +++    +   
Sbjct: 63  VLHGGEPLLLGERRLESLLSGLRRVLNPQKYPISIQTNGVL-----ITEKILNLCSKYRV 117

Query: 206 PVYIAI 211
            + ++I
Sbjct: 118 SISVSI 123


>gi|218886327|ref|YP_002435648.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
           str. 'Miyazaki F']
 gi|218757281|gb|ACL08180.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
           str. 'Miyazaki F']
          Length = 361

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 17/161 (10%)

Query: 99  LKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           L +   C + C +C+       +      VL  ++    +  +  +  + +V  TGG+P 
Sbjct: 25  LSVTDRCNLRCSYCWGCSEMRFI--PHDDVLRYEEMARIVD-VAVEEGVEKVRLTGGEPF 81

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211
           +   K L   L  L        +R  +   ++ P       ++ L  +   + +      
Sbjct: 82  V--RKGLTGFLDMLHRRHPALDIRITTNGTLLAPH---AAALRGLGVSTVNISLDTFRRD 136

Query: 212 --HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
              A    +   + +  I    +AG+ +   +V LKG+NDD
Sbjct: 137 RFAATTGRDMLPQVLEGIHAALDAGLAVKINAVALKGVNDD 177


>gi|222529567|ref|YP_002573449.1| radical SAM domain-containing protein [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456414|gb|ACM60676.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725]
          Length = 429

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 25/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L   + C +YC+ C+  +   + +   LS +    A+  ++    + ++I +GG+P + +
Sbjct: 91  LHYTNKCNLYCKGCYSYDQNRNDESQDLSMEYFLEAVKQLKTY-GLDKIIISGGEPTLRN 149

Query: 159 H-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
                 K LK +  I ++ ++   + +P          L+  ++E    V ++I      
Sbjct: 150 DLDEFIKYLKEILDINYIVLITNGTNLP--------HNLLHTIREYVDDVAVSI------ 195

Query: 218 EFSEEAIAAISRLANAGI--ILLSQSVLLK--GINDDPEILANLMRT 260
              +     I+ +   GI  I+++   LLK  GIN    ++A L R 
Sbjct: 196 ---DGYEEGITFIRPTGIHKIVMNNIALLKEAGIN--VSMIATLHRK 237


>gi|84497391|ref|ZP_00996213.1| hypothetical protein JNB_14393 [Janibacter sp. HTCC2649]
 gi|84382279|gb|EAP98161.1| hypothetical protein JNB_14393 [Janibacter sp. HTCC2649]
          Length = 515

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 36/194 (18%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           P+       L  +  ++   +L  LL  C + C  CF           + S    E  LA
Sbjct: 91  PVPSAYEDGLPQMQTQHTCILLEDLLDHCNLKCPTCF-----AESSPALASVAPLEQVLA 145

Query: 137 YI-----QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
            I     +E  +I  ++ +GG+P++    +L+++L+ +     V+IL  ++        R
Sbjct: 146 SIDTRLSRENGRIDVLMLSGGEPMLYP--QLEELLEAVIARPIVRIL-INTNGL-----R 197

Query: 192 I--NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA------------AISRLANAGI-I 236
           +  + EL+  L+   + V + +  +   E +E +IA            AI RL+ AG+  
Sbjct: 198 VAQDDELVALLRRHRERVEVYLQYD--GESAEASIAHRGADIRRFKERAIERLSAAGVFT 255

Query: 237 LLSQSVLLKGINDD 250
            L+ +  L G+NDD
Sbjct: 256 TLTMTASL-GVNDD 268


>gi|145220155|ref|YP_001130864.1| nitrogenase cofactor biosynthesis protein NifB [Prosthecochloris
           vibrioformis DSM 265]
 gi|145206319|gb|ABP37362.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium
           phaeovibrioides DSM 265]
          Length = 420

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 73/216 (33%), Gaps = 53/216 (24%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQE----KSQIWEVI 148
            RI L +   C + C +C R+    ++    +SSK      AL Y++        I  V 
Sbjct: 20  GRIHLPVAPKCNIQCNYCNRKFDCMNENRPGVSSKLLSPGQALHYLKAAVELSPNISVVG 79

Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILR---------FHSRVPIVDPQRINPELIQ 198
             G GDP     +           ++ ++++R           +    + P     EL +
Sbjct: 80  IAGPGDPFANPDET----------METLRLVRKEYPEMLLCVATNGLNLLPY--IDELAE 127

Query: 199 CLKEAGKPVYIAI-----------HANHPYEFSEEAIAA----------ISRLANAGIIL 237
            L+ +   + I                H  +   +  AA          +  L   GI  
Sbjct: 128 -LEVSHVTITINAIDPAVGAEIYAWVRHEKKMHRDIEAAELLIGKQLEGLKELKARGITA 186

Query: 238 LSQSVLLKGIND-DPEILANLMRTFVE--LRIKPYY 270
              ++++ G+ND   E +A  + +     L   PYY
Sbjct: 187 KVNTIIIPGVNDHHVETVARTVASLGADILNCLPYY 222


>gi|307721185|ref|YP_003892325.1| MiaB-like tRNA modifying enzyme [Sulfurimonas autotrophica DSM
           16294]
 gi|306979278|gb|ADN09313.1| MiaB-like tRNA modifying enzyme [Sulfurimonas autotrophica DSM
           16294]
          Length = 424

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 10/125 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C    + G      +        +A +       E I TG +
Sbjct: 142 KSRAFIKIQEGCNFRCSYCIIPYVRGD--ARSMDENRILEQVARLAIN-GFGEFILTGTN 198

Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                      L K++K +  I+ V+ +R  S    V+P +I  E  + L E     ++ 
Sbjct: 199 VGSYGQDTKTSLAKLMKKMSQIRGVRRIRLGS----VEPIQITDEFKEILDEPWMEKHMH 254

Query: 211 IHANH 215
           I   H
Sbjct: 255 IALQH 259


>gi|317052447|ref|YP_004113563.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Desulfurispirillum indicum S5]
 gi|316947531|gb|ADU67007.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Desulfurispirillum indicum S5]
          Length = 236

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 11/102 (10%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
            H C + CR+C    +V  Q G        +  L YI    QI  V  TGG+PL    + 
Sbjct: 29  THGCNLRCRYCHNPALVLGQPG----RSRQDQLLEYIDRH-QIGAVAITGGEPLF--QRE 81

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           L+ +L+ LR     + +R         P R+   L Q L + 
Sbjct: 82  LETLLQQLRS----RKIRIKLDTNGTLPHRLKQVLEQELVDF 119


>gi|89898549|ref|YP_515659.1| hypothetical protein CF0742 [Chlamydophila felis Fe/C-56]
 gi|89331921|dbj|BAE81514.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56]
          Length = 421

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 51/124 (41%), Gaps = 13/124 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C  +C +C    + G  + +  + +  E     + +     EV+  G +
Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSR-SRPAREVLEEISGIVSQ--GYREVVIAGIN 190

Query: 154 PLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
                 +   L  +++ +  I+ ++ +R  S    +DP+ +  +L   L  +GK      
Sbjct: 191 VGDYQDEGHSLAHLIRRVDEIEGIERIRISS----IDPEDVQEDLRDVLL-SGKHTC--- 242

Query: 212 HANH 215
           H++H
Sbjct: 243 HSSH 246


>gi|297621456|ref|YP_003709593.1| MiaB-like tRNA modifying enzyme [Waddlia chondrophila WSU 86-1044]
 gi|297376758|gb|ADI38588.1| MiaB-like tRNA modifying enzyme [Waddlia chondrophila WSU 86-1044]
          Length = 433

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 53/127 (41%), Gaps = 15/127 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152
             R  +K+   C  +C +C    + G  +   +  +  E     I       E++ TG  
Sbjct: 137 HTRAFVKVQDGCNSFCTYCIIPYVRGRSRSRTMG-QVLEEVKDLIAN--GYKEIVLTGIN 193

Query: 153 ----DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL---KEAGK 205
               D      +RL +++K +  +  ++ LR  S    +DP  ++ E+++ +   K+  +
Sbjct: 194 IGDFDGGADEPRRLAELVKEVDAVPGLERLRVSS----IDPDEVDDEMLETIINGKKTCR 249

Query: 206 PVYIAIH 212
            ++I + 
Sbjct: 250 SMHIVLQ 256


>gi|291522742|emb|CBK81035.1| MiaB-like tRNA modifying enzyme [Coprococcus catus GD/7]
          Length = 454

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/159 (13%), Positives = 51/159 (32%), Gaps = 24/159 (15%)

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q+I              D    + +  +         R  +K+   C  +C +C      
Sbjct: 112 QYIQDNRHTEDRDAYVADIAHSHEYETMHIETVSEHTRAYIKIQDGCNQFCSYCIIPYAR 171

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-----------------GDPLILSHKR 161
           G  +   +  +D    +  +       E++ TG                  D +   +  
Sbjct: 172 GRVRSRKM--EDILQEVRNLTAN-GYKEIVLTGIHISSYGLDFEHTADEQEDYVPFKNSA 228

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           L  +++ L  I+ ++ +R  S    ++P+ I    ++ L
Sbjct: 229 LIDLIEALSGIEGLERIRLGS----LEPRIITENFVRRL 263


>gi|254478005|ref|ZP_05091389.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653]
 gi|214036009|gb|EEB76699.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653]
          Length = 292

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 13/118 (11%)

Query: 96  RIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           R+L L +   C + C +C        +K  +L  +D E  +  + +   + E++ TGG+P
Sbjct: 3   RVLGLIVTSDCNLRCSYCDYSNKRRDKKSNLLV-EDVERFILAMSDYMNLGEIMITGGEP 61

Query: 155 LILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
            +LS+  ++  + T++    ++ IL   +         I+ E I+ LK+    V+I+I
Sbjct: 62  FLLSN--IEYWILTMKKYSPNISILTNGT--------LIDSEQIRWLKKHSVTVHISI 109


>gi|332157839|ref|YP_004423118.1| hypothetical protein PNA2_0196 [Pyrococcus sp. NA2]
 gi|331033302|gb|AEC51114.1| hypothetical protein PNA2_0196 [Pyrococcus sp. NA2]
          Length = 419

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 73/188 (38%), Gaps = 41/188 (21%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFC---------FRREMVGSQKGTVLSSKDTEAALAYI 138
           G++ R  + I ++    C + C FC          R+         ++   +  A     
Sbjct: 108 GLIDRGTNLIQVRGSTGCNMSCIFCSVDEGPYSRTRKLDFVVDVDYLMKWFNWVAE---- 163

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           Q+   +   +   G+PL+     + ++++ LR   +V ++   S   +     +N +L++
Sbjct: 164 QKGKGLEAHLDAQGEPLLYP--FIVELVQALRDHPNVSVISMQSNGVL-----LNDKLVE 216

Query: 199 CLKEAGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLANAGIILLSQSV 242
            L EAG   V ++IH         E    +                 L NAGI +L   V
Sbjct: 217 ELAEAGLDRVNLSIH-----SLDPEKAKMLMGRKDYDLEHVLEMAEALVNAGIDVLIAPV 271

Query: 243 LLKGINDD 250
           ++ GIND+
Sbjct: 272 IIFGINDN 279


>gi|229166606|ref|ZP_04294358.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621]
 gi|228616860|gb|EEK73933.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621]
          Length = 338

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGRDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+     L ++++ L  I  V+ +
Sbjct: 77  PLLRKD--LPELIQRLNEIDGVEDI 99


>gi|94496981|ref|ZP_01303555.1| probable molybdenum cofactor biosynthesis protein [Sphingomonas sp.
           SKA58]
 gi|94423657|gb|EAT08684.1| probable molybdenum cofactor biosynthesis protein [Sphingomonas sp.
           SKA58]
          Length = 326

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 22/164 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + CR+C    M    +  VLS ++          +  I ++  TGG+PL+  
Sbjct: 14  ISVTDRCDLRCRYCMAERMHFLPRDQVLSLEEIALLADLFIAR-GITKIRLTGGEPLVRR 72

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRV----PIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
              + ++++ +            S +       +  R++           + V +++ + 
Sbjct: 73  D--IGELVRRIGRH-------LGSGLDELTLTTNATRLDSHAQDLFDAGVRRVNVSLDSR 123

Query: 215 HPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
            P  F++           A +     AG+ +    V LKGINDD
Sbjct: 124 DPARFADVTRGGDIGRVFAGLDAARAAGLAVKINMVALKGINDD 167


>gi|172056823|ref|YP_001813283.1| RNA modification protein [Exiguobacterium sibiricum 255-15]
 gi|171989344|gb|ACB60266.1| RNA modification enzyme, MiaB family [Exiguobacterium sibiricum
           255-15]
          Length = 444

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 12/124 (9%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
             R  LK+   C  +C FC      G  +        K  +  +       +I    I T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRQPEDVLKQAQQLVD--AGYKEIVLTGIHT 199

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI- 209
           GG    L    L K+LK L  +  ++ LR  S    ++  +I  E++  LK++  P+ + 
Sbjct: 200 GGYGEDLKDYNLAKLLKALESVTGLERLRISS----IEASQITDEVLDVLKDS--PIVVR 253

Query: 210 AIHA 213
            +H 
Sbjct: 254 HLHV 257


>gi|32266379|ref|NP_860411.1| hypothetical protein HH0880 [Helicobacter hepaticus ATCC 51449]
 gi|32262429|gb|AAP77477.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 423

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 15/124 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C   C +C     V  +  +       E  +  + +  +  EV+ TG +
Sbjct: 135 KSRAFLKIQEGCDFACSYCII-PFVRGKARSYPQKSILEQ-IRALAQNGK-TEVVLTGTN 191

Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK----EAGK 205
                  L    L +++K +  +  ++ LR  S    ++P +I+ EL + L+    E   
Sbjct: 192 VGSYGKDLKDYNLARLIKDIYSLGVLKRLRVGS----LEPSQIDSELKESLELPFMEKHL 247

Query: 206 PVYI 209
            + +
Sbjct: 248 HIAL 251


>gi|117928855|ref|YP_873406.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B]
 gi|166217236|sp|A0LVG0|MOAA_ACIC1 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|117649318|gb|ABK53420.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B]
          Length = 362

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 42/183 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGG 152
           + +   C + CR+C  RE+ G       +  +L+ ++    A A+I+    + ++  TGG
Sbjct: 18  ISVTDRCNMRCRYCMPREIFGPNFTFLPRSELLTFEEITRIAAAFIRA--GVRKIRLTGG 75

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQIL----------RF-------HSRVPIVDPQRINPE 195
           +PL+ +   L +++  L  +  V  L          R+         R   V    +NP 
Sbjct: 76  EPLLRAD--LPRLVAMLADLPDVHDLALTTNGSLLARYARPLRDAGLRRVTVSLDTLNPA 133

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGIND-DPEI 253
               L +   P+             +  +A I    +AG   +   +V+ +G+ND D E 
Sbjct: 134 TFSRLADTDIPL-------------DNVLAGIDAAQSAGFFPIKLNAVIRRGVNDGDVEE 180

Query: 254 LAN 256
           LA 
Sbjct: 181 LAA 183


>gi|194334439|ref|YP_002016299.1| nitrogenase cofactor biosynthesis protein NifB [Prosthecochloris
           aestuarii DSM 271]
 gi|194312257|gb|ACF46652.1| nitrogenase cofactor biosynthesis protein NifB [Prosthecochloris
           aestuarii DSM 271]
          Length = 424

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 44/214 (20%), Positives = 76/214 (35%), Gaps = 49/214 (22%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAY----IQEKSQIWEVI 148
            RI L +   C + C +C R+    ++    ++SK      AL Y    I+    I  V 
Sbjct: 20  GRIHLPVAPKCNIQCNYCNRKFDCLNENRPGVTSKVLSPHQALHYLDKAIELSPNISVVG 79

Query: 149 FTG-GDPLILSHKRLQK------------------------VLKTLRY--IKHVQILRFH 181
             G GDP     + ++                          ++ L    + HV  L  +
Sbjct: 80  IAGPGDPFANPEETMETLRLVREKYPDMLLCVATNGLNVMPYIEELAQLQVSHV-TLTIN 138

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
                VDP+ I  E+   ++   K +Y     N      E  +AA+ +L   G+     +
Sbjct: 139 ----AVDPE-IGSEIYAWVR-HRKKMYRDT--NAAKILLESQLAALKKLKEIGVTAKVNA 190

Query: 242 VLLKGINDD-----PEILANLMRTFVELRIKPYY 270
           +++ G+ND       + +A L          PYY
Sbjct: 191 IVIPGVNDKHVAEVAKTVAELGADIF--NCLPYY 222


>gi|320161123|ref|YP_004174347.1| oxidoreductase [Anaerolinea thermophila UNI-1]
 gi|319994976|dbj|BAJ63747.1| oxidoreductase [Anaerolinea thermophila UNI-1]
          Length = 395

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 13/120 (10%)

Query: 57  ARQFIP-QKEELNILPEEREDPIGDNNHSPLKGIVH-RYPD--RILLKLLHVCPVYCRFC 112
             Q +P    E   +P   E  + + +      I+H R PD  ++ ++    C ++C  C
Sbjct: 11  RLQ-LPFSFLERRQMPAGAEYWLDERDG---DLILHPRKPDVRKLYIEPTTGCNLHCVTC 66

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRY 171
            R   V   +   +S +  E  L  I    ++  V+FTG G+PL   +  +  +++ +R 
Sbjct: 67  IRN--VWEDEEAQMSMQTFERILEGIDHLPELKRVVFTGFGEPLTHKN--IFDMIEEIRR 122


>gi|289434309|ref|YP_003464181.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
 gi|289170553|emb|CBH27093.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri
           serovar 1/2b str. SLCC3954]
          Length = 333

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +    +  I  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSQDEIVGFME-IMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +    G   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQTITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170


>gi|16800108|ref|NP_470376.1| molybdenum cofactor biosynthesis protein A [Listeria innocua
           Clip11262]
 gi|24211995|sp|Q92CY2|MOAA_LISIN RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|16413498|emb|CAC96270.1| lin1039 [Listeria innocua Clip11262]
          Length = 333

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  +  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +    G   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170


>gi|71908225|ref|YP_285812.1| GTP cyclohydrolase subunit MoaA [Dechloromonas aromatica RCB]
 gi|71847846|gb|AAZ47342.1| GTP cyclohydrolase subunit MoaA [Dechloromonas aromatica RCB]
          Length = 327

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 27/177 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C   +  G ++    LS  + E  +        +  V  TGG+PL+ 
Sbjct: 19  LSVTDRCDLRCAYCMPSDFSGYEEPEHWLSFDEIERLVGLFARF-GLRRVRLTGGEPLM- 76

Query: 158 SHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA 213
             K L  + + ++ I  V+ L      +++          +  Q L++AG   + +++  
Sbjct: 77  -RKGLAGLARRIKAIPGVEDLSLSTNGTQL---------RKHGQALRDAGVDRLNVSLDT 126

Query: 214 NHP---YEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDDP-EILANLMRT 260
             P    E +      + +A ++     G   +    V L G+NDD  E + +  R 
Sbjct: 127 LQPARFAEITRRDALADVLAGLATAREIGFAPIKINMVWLAGVNDDELEAMVDFCRQ 183


>gi|313624269|gb|EFR94317.1| molybdenum cofactor biosynthesis protein A [Listeria innocua FSL
           J1-023]
          Length = 333

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  +  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +    G   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170


>gi|168217043|ref|ZP_02642668.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
 gi|182625833|ref|ZP_02953599.1| conserved hypothetical protein [Clostridium perfringens D str.
           JGS1721]
 gi|177908867|gb|EDT71359.1| conserved hypothetical protein [Clostridium perfringens D str.
           JGS1721]
 gi|182380957|gb|EDT78436.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239]
          Length = 445

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 53/177 (29%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L     C   C FCF  ++    + T+    D ++ L+++Q       V  T      
Sbjct: 79  AILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FVTLT-----N 128

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           +  + + +++K                       RI+            P+ +++H  +P
Sbjct: 129 MKDEDIDRIIK----------------------YRIS------------PINVSVHTTNP 154

Query: 217 --------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
                     F+      + +LA AGI + +Q V++ GIN + + L   +    +LR
Sbjct: 155 DLRKKILNNRFAGNVYERLQKLAAAGITVNAQIVVMPGIN-NGDELVRTVEDLYKLR 210


>gi|110802540|ref|YP_699042.1| hypothetical protein CPR_1727 [Clostridium perfringens SM101]
 gi|168207283|ref|ZP_02633288.1| conserved hypothetical protein [Clostridium perfringens E str.
           JGS1987]
 gi|169342694|ref|ZP_02863735.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
 gi|110683041|gb|ABG86411.1| conserved hypothetical protein [Clostridium perfringens SM101]
 gi|169299200|gb|EDS81270.1| conserved hypothetical protein [Clostridium perfringens C str.
           JGS1495]
 gi|170661336|gb|EDT14019.1| conserved hypothetical protein [Clostridium perfringens E str.
           JGS1987]
          Length = 445

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 53/177 (29%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L     C   C FCF  ++    + T+    D ++ L+++Q       V  T      
Sbjct: 79  AILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FVTLT-----N 128

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           +  + + +++K                       RI+            P+ +++H  +P
Sbjct: 129 MKDEDIDRIIK----------------------YRIS------------PINVSVHTTNP 154

Query: 217 --------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
                     F+      + +LA AGI + +Q V++ GIN + + L   +    +LR
Sbjct: 155 DLRKKILNNRFAGNVYERLQKLAAAGITVNAQIVVMPGIN-NGDELVRTVEDLYKLR 210


>gi|18310738|ref|NP_562672.1| hypothetical protein CPE1756 [Clostridium perfringens str. 13]
 gi|110800057|ref|YP_696442.1| hypothetical protein CPF_2009 [Clostridium perfringens ATCC 13124]
 gi|168210611|ref|ZP_02636236.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
 gi|168214233|ref|ZP_02639858.1| conserved hypothetical protein [Clostridium perfringens CPE str.
           F4969]
 gi|18145419|dbj|BAB81462.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|110674704|gb|ABG83691.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124]
 gi|170711255|gb|EDT23437.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC
           3626]
 gi|170714325|gb|EDT26507.1| conserved hypothetical protein [Clostridium perfringens CPE str.
           F4969]
          Length = 445

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 53/177 (29%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L     C   C FCF  ++    + T+    D ++ L+++Q       V  T      
Sbjct: 79  AILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FVTLT-----N 128

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           +  + + +++K                       RI+            P+ +++H  +P
Sbjct: 129 MKDEDIDRIIK----------------------YRIS------------PINVSVHTTNP 154

Query: 217 --------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
                     F+      + +LA AGI + +Q V++ GIN + + L   +    +LR
Sbjct: 155 DLRKKILNNRFAGNVYERLQKLAAAGITVNAQIVVMPGIN-NGDELVRTVEDLYKLR 210


>gi|290893803|ref|ZP_06556782.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           FSL J2-071]
 gi|290556630|gb|EFD90165.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           FSL J2-071]
          Length = 333

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  +  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +    G   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170


>gi|254828424|ref|ZP_05233111.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           FSL N3-165]
 gi|258600819|gb|EEW14144.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           FSL N3-165]
          Length = 333

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  +  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +    G   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170


>gi|238917088|ref|YP_002930605.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750]
 gi|238872448|gb|ACR72158.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750]
          Length = 446

 Score = 48.2 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 20/127 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  +K+   C  +C +C    + G  +      +D    +  +     + EV+ TG  
Sbjct: 149 HTRAYIKIQDGCNQFCSYCIIPYVRGRVRSR--KPEDIVNEVKTLAAT-GVKEVVLTGIH 205

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++++ +  I+ ++ +R  S    ++P+ I  E  + +    K 
Sbjct: 206 ISSYGTD---LENISLIELIEAIHEIEGIKRIRLGS----LEPRIITEEFAKRIAGLEK- 257

Query: 207 VYIAIHA 213
             I  H 
Sbjct: 258 --ICPHF 262


>gi|242371916|ref|ZP_04817490.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
           epidermidis M23864:W1]
 gi|242350423|gb|EES42024.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
           epidermidis M23864:W1]
          Length = 340

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 44/177 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           L +   C   C +C  +E+ G       K  +L+  +    ++ I  +  + ++  TGG+
Sbjct: 18  LSVTDRCNFRCDYCMPKEIFGDDFVFLPKDELLTFDEMTR-ISRIYAELGVKKIRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+   + L ++++ L  I+ ++ +   +                 LK+ G+ +Y     
Sbjct: 77  PLL--RRNLYQLIEQLNEIEGIEDIGLTTNGL-------------LLKKHGQKLYDAGLR 121

Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
            I +  +      ++   AI+        +L Q               V+ KG+NDD
Sbjct: 122 RINVSLDA---IDDQVFQAINNRNIKASTILEQIDYAVSIGFHVKVNVVIQKGVNDD 175


>gi|313609517|gb|EFR85068.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           FSL F2-208]
          Length = 333

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  +  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +    G   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170


>gi|299537483|ref|ZP_07050777.1| molybdenum cofactor biosynthesis protein A [Lysinibacillus
           fusiformis ZC1]
 gi|298727044|gb|EFI67625.1| molybdenum cofactor biosynthesis protein A [Lysinibacillus
           fusiformis ZC1]
          Length = 338

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 50/270 (18%), Positives = 91/270 (33%), Gaps = 56/270 (20%)

Query: 90  VHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143
           +HR P R L + +   C   CR+C   E+ G          +LS  + E  +  I     
Sbjct: 8   LHR-PLRDLRISVTDRCNFRCRYCMPAEVFGPDYAFLPSDKILSFDEIERLVK-IFVSLG 65

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS------------------RVP 185
           + ++  TGG+PL+     L +++  +  IK V+ +   +                  RV 
Sbjct: 66  VKKIRITGGEPLLRRD--LPELIARIHRIKGVEDIALTTNGSLLKKYAQPLAQAGLARVS 123

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
           +      +    +     GK +                +  I + A AG+ +    V+ K
Sbjct: 124 VSLDSLDDERFFEMNGYRGKVL--------------PVLEGIEKAAEAGLQVKINMVVQK 169

Query: 246 GIND-DPEILANLM-RTFVELRIKPYYLHHPDLAAGTSHFRL-TIEEGQKIVASLKEKIS 302
           G N+ D   +A         LR   Y          ++ +RL  +   ++I+  + +   
Sbjct: 170 GKNEQDIVTMAQFFKEKQHILRFIEY-----MDVGNSNGWRLDDVVSKKEIIEQIHQFTP 224

Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332
              QP      P   G+V          G 
Sbjct: 225 --LQPV----APNYKGEVATRYQYQDAQGE 248


>gi|327311114|ref|YP_004338011.1| Radical SAM domain-containing protein [Thermoproteus uzoniensis
           768-20]
 gi|326947593|gb|AEA12699.1| Radical SAM domain protein [Thermoproteus uzoniensis 768-20]
          Length = 370

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 49/307 (15%), Positives = 100/307 (32%), Gaps = 69/307 (22%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD---TEAALAYIQEKSQIWEVI 148
           + P  +  ++   CP+ CR C    ++    G + + +     E  + + +   ++   I
Sbjct: 12  KRPLLVFWEVTRACPLACRHCRADAILKPLPGELSTWEAKAFLEQLVDFGRPPPEL---I 68

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207
            TGGDPL+     L ++L   + +           +P      ++  L + L E    + 
Sbjct: 69  VTGGDPLMRLD--LMEILDYAKELG----------IPTSLAPAVSKNLFEALPELRGRIK 116

Query: 208 YIAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANL 257
             +I  +   E  EE             AI  L  AGI +   +V+ +        L ++
Sbjct: 117 SASISLDGLKEVHEELRGVPGVFDSTIEAIKALMGAGIRVQVNTVVWRK---SFPQLPDV 173

Query: 258 MRTFVELRIKPYYLHHPD---------LAAGTSH-----FRLTIEE-GQKI-------VA 295
            +   +L ++ + +               +   +     F +     G +I         
Sbjct: 174 FKLIYDLGVRVWEVFFLIETGRAVKALDISPQEYEDAVQFLVDASRYGVQIRTVEAPFYR 233

Query: 296 SLK-EKISG--LCQPFY------ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH- 345
             K ++ SG     P Y      + +L G   K  +D   +            +   V+ 
Sbjct: 234 RAKIQRASGLSYTSPAYEKLVARLRELMGEP-KKPLDPTVVPTRDGHGIIFVAYDGTVYP 292

Query: 346 ----DYP 348
                YP
Sbjct: 293 SGFLPYP 299


>gi|310779510|ref|YP_003967843.1| MiaB-like tRNA modifying enzyme [Ilyobacter polytropus DSM 2926]
 gi|309748833|gb|ADO83495.1| MiaB-like tRNA modifying enzyme [Ilyobacter polytropus DSM 2926]
          Length = 437

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 14/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            R  +K+   C  +C +C +      +  +       + A+  I  K    E+I  G + 
Sbjct: 147 SRAYIKIQDGCNNFCSYC-KIPFARGKSRSRKLKSILKEAV--ILAKEGFKEIIIIGINL 203

Query: 155 LIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
            +       +   + +L  +  +  ++ +R  S    + P +I+   I+ +K   K +  
Sbjct: 204 GVYGEDIPENGDFETLLDEISKVDGIERIRIGS----MYPDKISDRFIELMKNNSK-LMP 258

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +E + A++R
Sbjct: 259 HLHIS-LQSCDDEILKAMNR 277


>gi|170735545|ref|YP_001774659.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           cenocepacia MC0-3]
 gi|169821583|gb|ACA96164.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           cenocepacia MC0-3]
          Length = 374

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 58/233 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
           L ++  C   C +C  RE  G+    + SS+    A L  I        + ++  TGG+P
Sbjct: 46  LSVIDQCNFRCGYCMPRESFGTDYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEP 105

Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
           L+   + L+ +++ L  +  V                    + LR    SRV +     +
Sbjct: 106 LL--RRNLEALIERLATLTTVDGKPVEIALTTNGSLLAAKARALRDAGLSRVTVSL-DAL 162

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
           +  + + + +A  PV   +             A I     AG   +   +V+ +G+NDD 
Sbjct: 163 DDAVFRRMNDADVPVARVL-------------AGIEAAHAAGLAPVKVNAVIERGVNDD- 208

Query: 252 EILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296
             +  L+R F    +      Y         G S +     +     ++++  
Sbjct: 209 -QILPLVRHFRHTGVAVRFIEY-----MDVGGASFWSGDKVVPAARMRELIDE 255


>gi|224500308|ref|ZP_03668657.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           Finland 1988]
          Length = 333

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  +  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +    G   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170


>gi|16803087|ref|NP_464572.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           EGD-e]
 gi|47096135|ref|ZP_00233735.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           str. 1/2a F6854]
 gi|224502639|ref|ZP_03670946.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           FSL R2-561]
 gi|254830184|ref|ZP_05234839.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           10403S]
 gi|254898780|ref|ZP_05258704.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           J0161]
 gi|254911731|ref|ZP_05261743.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           J2818]
 gi|254936057|ref|ZP_05267754.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           F6900]
 gi|255029181|ref|ZP_05301132.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           LO28]
 gi|284801379|ref|YP_003413244.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           08-5578]
 gi|284994521|ref|YP_003416289.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           08-5923]
 gi|24211990|sp|Q8Y870|MOAA_LISMO RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|16410449|emb|CAC99125.1| lmo1047 [Listeria monocytogenes EGD-e]
 gi|47015484|gb|EAL06417.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           str. 1/2a F6854]
 gi|258608646|gb|EEW21254.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           F6900]
 gi|284056941|gb|ADB67882.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           08-5578]
 gi|284059988|gb|ADB70927.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           08-5923]
 gi|293589681|gb|EFF98015.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           J2818]
          Length = 333

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  +  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +    G   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170


>gi|315281772|ref|ZP_07870331.1| molybdenum cofactor biosynthesis protein A [Listeria marthii FSL
           S4-120]
 gi|313614582|gb|EFR88167.1| molybdenum cofactor biosynthesis protein A [Listeria marthii FSL
           S4-120]
          Length = 333

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  +  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LKEAG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +    G   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170


>gi|282908895|ref|ZP_06316713.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|283958340|ref|ZP_06375791.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|282327159|gb|EFB57454.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|283790489|gb|EFC29306.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
           A017934/97]
          Length = 448

 Score = 47.8 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  L+ + K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|302333252|gb|ADL23445.1| radical SAM domain protein [Staphylococcus aureus subsp. aureus
           JKD6159]
          Length = 448

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  L+ + K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|254519873|ref|ZP_05131929.1| predicted protein [Clostridium sp. 7_2_43FAA]
 gi|226913622|gb|EEH98823.1| predicted protein [Clostridium sp. 7_2_43FAA]
          Length = 434

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 15/125 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C      GS              +  + E     E+I +G  
Sbjct: 141 KTRAFLKIQDGCNRFCTYCIIPYSRGSVCSKDPKK--VLEEVNKLAEH-GFKEIILSGIH 197

Query: 154 PLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                        L  +++ +  ++ ++ +R  S    ++P    PE+I+ +K+  K   
Sbjct: 198 TASYGLDLEGSVNLIDIIEEIEKVEGIERIRIGS----IEPAFFTPEVIEKIKKFKK--- 250

Query: 209 IAIHA 213
           +  H 
Sbjct: 251 LCPHF 255


>gi|21283257|ref|NP_646345.1| hypothetical protein MW1528 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486411|ref|YP_043632.1| hypothetical protein SAS1514 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57651969|ref|YP_186473.1| hypothetical protein SACOL1633 [Staphylococcus aureus subsp. aureus
           COL]
 gi|87160469|ref|YP_494231.1| hypothetical protein SAUSA300_1536 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88195385|ref|YP_500189.1| hypothetical protein SAOUHSC_01679 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268060|ref|YP_001247003.1| RNA modification protein [Staphylococcus aureus subsp. aureus JH9]
 gi|150394128|ref|YP_001316803.1| RNA modification protein [Staphylococcus aureus subsp. aureus JH1]
 gi|151221691|ref|YP_001332513.1| hypothetical protein NWMN_1479 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|161509804|ref|YP_001575463.1| hypothetical protein USA300HOU_1577 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253316051|ref|ZP_04839264.1| hypothetical protein SauraC_07882 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253732229|ref|ZP_04866394.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253733173|ref|ZP_04867338.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257793652|ref|ZP_05642631.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9781]
 gi|258411048|ref|ZP_05681328.1| RNA modification protein [Staphylococcus aureus A9763]
 gi|258420148|ref|ZP_05683103.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9719]
 gi|258437408|ref|ZP_05689392.1| RNA modification protein [Staphylococcus aureus A9299]
 gi|258443614|ref|ZP_05691953.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258446821|ref|ZP_05694975.1| RNA modification protein [Staphylococcus aureus A6300]
 gi|258448735|ref|ZP_05696847.1| RNA modification protein [Staphylococcus aureus A6224]
 gi|258450595|ref|ZP_05698657.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5948]
 gi|258453552|ref|ZP_05701530.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5937]
 gi|262049149|ref|ZP_06022026.1| hypothetical protein SAD30_0306 [Staphylococcus aureus D30]
 gi|262051236|ref|ZP_06023460.1| hypothetical protein SA930_1667 [Staphylococcus aureus 930918-3]
 gi|269203204|ref|YP_003282473.1| hypothetical protein SAAV_1568 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282893077|ref|ZP_06301311.1| MiaB tRNA modifying enzyme [Staphylococcus aureus A8117]
 gi|282920125|ref|ZP_06327850.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9765]
 gi|282928209|ref|ZP_06335814.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A10102]
 gi|284024635|ref|ZP_06379033.1| hypothetical protein Saura13_08590 [Staphylococcus aureus subsp.
           aureus 132]
 gi|294848607|ref|ZP_06789353.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9754]
 gi|295406699|ref|ZP_06816504.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8819]
 gi|296275802|ref|ZP_06858309.1| hypothetical protein SauraMR_05622 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297207705|ref|ZP_06924140.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297245719|ref|ZP_06929584.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8796]
 gi|300911786|ref|ZP_07129229.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380835|ref|ZP_07363495.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|21204697|dbj|BAB95393.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49244854|emb|CAG43315.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286155|gb|AAW38249.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|87126443|gb|ABD20957.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202943|gb|ABD30753.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741129|gb|ABQ49427.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149946580|gb|ABR52516.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp.
           aureus JH1]
 gi|150374491|dbj|BAF67751.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|160368613|gb|ABX29584.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253724018|gb|EES92747.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|253728713|gb|EES97442.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|257787624|gb|EEV25964.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9781]
 gi|257840198|gb|EEV64662.1| RNA modification protein [Staphylococcus aureus A9763]
 gi|257843859|gb|EEV68253.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9719]
 gi|257848613|gb|EEV72601.1| RNA modification protein [Staphylococcus aureus A9299]
 gi|257851020|gb|EEV74963.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257854396|gb|EEV77345.1| RNA modification protein [Staphylococcus aureus A6300]
 gi|257858013|gb|EEV80902.1| RNA modification protein [Staphylococcus aureus A6224]
 gi|257861753|gb|EEV84552.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5948]
 gi|257864283|gb|EEV87033.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5937]
 gi|259160873|gb|EEW45893.1| hypothetical protein SA930_1667 [Staphylococcus aureus 930918-3]
 gi|259162818|gb|EEW47383.1| hypothetical protein SAD30_0306 [Staphylococcus aureus D30]
 gi|262075494|gb|ACY11467.1| hypothetical protein SAAV_1568 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941066|emb|CBI49450.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282590016|gb|EFB95098.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A10102]
 gi|282594473|gb|EFB99458.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9765]
 gi|282764395|gb|EFC04521.1| MiaB tRNA modifying enzyme [Staphylococcus aureus A8117]
 gi|283470855|emb|CAQ50066.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ST398]
 gi|285817258|gb|ADC37745.1| MiaB family protein, possibly involved in tRNA or rRNA modification
           [Staphylococcus aureus 04-02981]
 gi|294824633|gb|EFG41056.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9754]
 gi|294968446|gb|EFG44470.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8819]
 gi|296887722|gb|EFH26620.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
           51811]
 gi|297177370|gb|EFH36622.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8796]
 gi|298694858|gb|ADI98080.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300886032|gb|EFK81234.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304340562|gb|EFM06496.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312829964|emb|CBX34806.1| RNA modification enzyme, MiaB family protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315129855|gb|EFT85845.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315198728|gb|EFU29056.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140539|gb|EFW32393.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus MRSA131]
 gi|320144076|gb|EFW35845.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus MRSA177]
 gi|323440474|gb|EGA98186.1| hypothetical protein SAO11_0770 [Staphylococcus aureus O11]
 gi|323443248|gb|EGB00866.1| hypothetical protein SAO46_0897 [Staphylococcus aureus O46]
 gi|329727386|gb|EGG63842.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp.
           aureus 21172]
 gi|329728416|gb|EGG64853.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp.
           aureus 21189]
 gi|329733119|gb|EGG69456.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp.
           aureus 21193]
          Length = 448

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  L+ + K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|329314252|gb|AEB88665.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp.
           aureus T0131]
          Length = 448

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  L+ + K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|221140004|ref|ZP_03564497.1| hypothetical protein SauraJ_00040 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|302751406|gb|ADL65583.1| radical SAM domain protein [Staphylococcus aureus subsp. aureus
           str. JKD6008]
          Length = 448

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  L+ + K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|49483824|ref|YP_041048.1| hypothetical protein SAR1653 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257425701|ref|ZP_05602125.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428362|ref|ZP_05604760.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257430999|ref|ZP_05607379.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433687|ref|ZP_05610045.1| RNA modification protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436601|ref|ZP_05612645.1| RNA modification protein [Staphylococcus aureus subsp. aureus M876]
 gi|282904158|ref|ZP_06312046.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus C160]
 gi|282905985|ref|ZP_06313840.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282911214|ref|ZP_06319016.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282914383|ref|ZP_06322169.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M899]
 gi|282919352|ref|ZP_06327087.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus C427]
 gi|282924677|ref|ZP_06332345.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus C101]
 gi|293503457|ref|ZP_06667304.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510474|ref|ZP_06669180.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus M809]
 gi|293531014|ref|ZP_06671696.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M1015]
 gi|295428154|ref|ZP_06820786.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297590880|ref|ZP_06949518.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus MN8]
 gi|49241953|emb|CAG40648.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257271395|gb|EEV03541.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257275203|gb|EEV06690.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278429|gb|EEV09065.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281780|gb|EEV11917.1| RNA modification protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283952|gb|EEV14075.1| RNA modification protein [Staphylococcus aureus subsp. aureus M876]
 gi|282313512|gb|EFB43907.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus C101]
 gi|282317162|gb|EFB47536.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus C427]
 gi|282321564|gb|EFB51889.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M899]
 gi|282324909|gb|EFB55219.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282331277|gb|EFB60791.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282595776|gb|EFC00740.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus C160]
 gi|290920282|gb|EFD97348.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M1015]
 gi|291095123|gb|EFE25388.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466838|gb|EFF09358.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus M809]
 gi|295128512|gb|EFG58146.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297575766|gb|EFH94482.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus MN8]
 gi|312437955|gb|ADQ77026.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|315195479|gb|EFU25866.1| hypothetical protein CGSSa00_07410 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 448

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  L+ + K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|15924566|ref|NP_372100.1| hypothetical protein SAV1576 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927156|ref|NP_374689.1| hypothetical protein SA1405 [Staphylococcus aureus subsp. aureus
           N315]
 gi|156979894|ref|YP_001442153.1| hypothetical protein SAHV_1563 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|255006362|ref|ZP_05144963.2| hypothetical protein SauraM_07835 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|13701374|dbj|BAB42668.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247347|dbj|BAB57738.1| putative 2-methylthioadenine synthetase [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|156722029|dbj|BAF78446.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
          Length = 448

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  L+ + K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|237737741|ref|ZP_04568222.1| Fe-S oxidoreductase [Fusobacterium mortiferum ATCC 9817]
 gi|229419621|gb|EEO34668.1| Fe-S oxidoreductase [Fusobacterium mortiferum ATCC 9817]
          Length = 432

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 25/145 (17%)

Query: 95  DRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
            R  +K+   C  +C +C     R      +K  +L  K+ E  +          E+I  
Sbjct: 146 SRAYVKIQDGCNNFCSYCKIPFARGRSRSRKKENIL--KEIEKLV-----NEGFKEIILI 198

Query: 151 GGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           G + L    + L++      +L+ +  +K ++ +R  S    V P +I+   +   K   
Sbjct: 199 GIN-LGAYGEDLEEDIDFEDLLEKILQVKGLERVRIGS----VYPDKISDRFVDMFK--Y 251

Query: 205 KPVYIAIHANHPYEFSEEAIAAISR 229
           K +   +H +      +  +  + R
Sbjct: 252 KNLMPHLHIS-LQSCDDTVLKMMKR 275


>gi|323703069|ref|ZP_08114724.1| protein of unknown function DUF512 [Desulfotomaculum nigrificans
           DSM 574]
 gi|323531963|gb|EGB21847.1| protein of unknown function DUF512 [Desulfotomaculum nigrificans
           DSM 574]
          Length = 436

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 63/184 (34%), Gaps = 58/184 (31%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                 C   C FCF  +M  + + T+           YI++                  
Sbjct: 84  FGPTRTCHNRCMFCFVDQMAPNMRPTL-----------YIRDD----------------- 115

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216
             RL         + +V+                + EL + + +   P+YI++H  +P  
Sbjct: 116 DYRLSFWQGNFISLTNVK----------------DEELQRIIHQKMGPLYISVHTTNPEL 159

Query: 217 ------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVEL 264
                    + + +  + +LA  GI + +Q+VL  G+ND  E+      LA L      L
Sbjct: 160 RRRMLNNRHAGKIMDQLRQLAAGGIEMHTQAVLCPGVNDGQEMERTITDLAGLWPRVHSL 219

Query: 265 RIKP 268
            + P
Sbjct: 220 AVVP 223


>gi|332652770|ref|ZP_08418515.1| Fe-S oxidoreductase [Ruminococcaceae bacterium D16]
 gi|332517916|gb|EGJ47519.1| Fe-S oxidoreductase [Ruminococcaceae bacterium D16]
          Length = 476

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 39/171 (22%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +  L+     C   C FCF  +M    + T+    D +A L+++             G+ 
Sbjct: 97  ETYLMDRARSCANNCIFCFVDQMPPGMRDTLYFKDD-DARLSFL------------MGNY 143

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHA 213
           L L++         L   +  +I+  H     V     +P+L ++ LK            
Sbjct: 144 LTLTN---------LSQREVQRIIDLHISPINVSVHTTDPQLRVEMLKNKR--------- 185

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
                 + E+I  + R A A I +  Q V   G+ND P +   L R   E+
Sbjct: 186 ------AGESIEVMRRFAAANITMNCQIVSCPGVNDGPALDRTL-RELSEM 229


>gi|254884770|ref|ZP_05257480.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 4_3_47FAA]
 gi|294774983|ref|ZP_06740513.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides vulgatus PC510]
 gi|319644167|ref|ZP_07998692.1| hypothetical protein HMPREF9011_04295 [Bacteroides sp. 3_1_40A]
 gi|254837563|gb|EET17872.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 4_3_47FAA]
 gi|294451192|gb|EFG19662.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides vulgatus PC510]
 gi|317384289|gb|EFV65260.1| hypothetical protein HMPREF9011_04295 [Bacteroides sp. 3_1_40A]
          Length = 152

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 25/60 (41%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C  +CR C   E      GT L+ +  E  +  I     +  + F+GGDPL    + L 
Sbjct: 25  GCRHHCRGCQNPESWNPSAGTPLTPEKIEKMICEINANPLLDGITFSGGDPLYHPQEFLA 84


>gi|182626906|ref|ZP_02954640.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens D str.
           JGS1721]
 gi|177907756|gb|EDT70368.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens D str.
           JGS1721]
          Length = 434

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  LK+   C  +C +C             + SKD +  L  I+  ++    E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195

Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                      ++  L  +L+ +  I  ++ +R  S    +DP     ++++ +    K 
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 251 --LCPHF 255


>gi|168215652|ref|ZP_02641277.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens NCTC 8239]
 gi|182382416|gb|EDT79895.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens NCTC 8239]
          Length = 434

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  LK+   C  +C +C             + SKD +  L  I+  ++    E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195

Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                      ++  L  +L+ +  I  ++ +R  S    +DP     ++++ +    K 
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 251 --LCPHF 255


>gi|110803412|ref|YP_699306.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens SM101]
 gi|110683913|gb|ABG87283.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens SM101]
          Length = 434

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  LK+   C  +C +C             + SKD +  L  I+  ++    E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195

Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                      ++  L  +L+ +  I  ++ +R  S    +DP     ++++ +    K 
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 251 --LCPHF 255


>gi|110801313|ref|YP_696705.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens ATCC
           13124]
 gi|110675960|gb|ABG84947.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens ATCC
           13124]
          Length = 434

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  LK+   C  +C +C             + SKD +  L  I+  ++    E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195

Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                      ++  L  +L+ +  I  ++ +R  S    +DP     ++++ +    K 
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 251 --LCPHF 255


>gi|18311007|ref|NP_562941.1| MiaB-like tRNA modifying protein [Clostridium perfringens str. 13]
 gi|168208727|ref|ZP_02634352.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens B str.
           ATCC 3626]
 gi|168212938|ref|ZP_02638563.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens CPE str.
           F4969]
 gi|18145689|dbj|BAB81731.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|170713061|gb|EDT25243.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens B str.
           ATCC 3626]
 gi|170715635|gb|EDT27817.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens CPE str.
           F4969]
          Length = 434

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  LK+   C  +C +C             + SKD +  L  I+  ++    E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195

Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                      ++  L  +L+ +  I  ++ +R  S    +DP     ++++ +    K 
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 251 --LCPHF 255


>gi|309811257|ref|ZP_07705048.1| molybdenum cofactor biosynthesis protein A [Dermacoccus sp.
           Ellin185]
 gi|308434797|gb|EFP58638.1| molybdenum cofactor biosynthesis protein A [Dermacoccus sp.
           Ellin185]
          Length = 362

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 40/207 (19%)

Query: 63  QKEELNILPEERED-PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-S 120
            + EL+      +D P+ D+      G VHR    + + L   C + C +C   E V  +
Sbjct: 19  LRGELSTAAGVSDDGPLVDS-----FGRVHR---DLRISLTDKCNLRCTYCMPAEGVPLA 70

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
            + T+L+S +    +A I  ++ I E+  TGG+PL+     +  +++ L  ++       
Sbjct: 71  PRDTLLASDEI-VTVARIAVEAGIDEIRLTGGEPLLRPD--IVDLVERLAALE------- 120

Query: 181 HSRVPIVDPQR-INPELIQC------LKEAGK-PVYIAIHANHPYEFSEEAIA------- 225
               P   P+  +    ++       L++AG   + +++    P  F+            
Sbjct: 121 ---GPGGRPELSMTTNAVRLAQLAKPLRDAGLARLNVSLDTLSPSRFATMTRRDRLDDVM 177

Query: 226 -AISRLANAG-IILLSQSVLLKGINDD 250
             +     AG   +   +VLL+G+NDD
Sbjct: 178 TGLDAARCAGFAPIKINTVLLRGVNDD 204


>gi|282916846|ref|ZP_06324604.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus D139]
 gi|283770652|ref|ZP_06343544.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19]
 gi|282319333|gb|EFB49685.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp.
           aureus D139]
 gi|283460799|gb|EFC07889.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19]
          Length = 448

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  L+ + K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|239635993|ref|ZP_04677010.1| molybdenum cofactor biosynthesis protein A [Staphylococcus warneri
           L37603]
 gi|239598458|gb|EEQ80938.1| molybdenum cofactor biosynthesis protein A [Staphylococcus warneri
           L37603]
          Length = 341

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 66/177 (37%), Gaps = 44/177 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAA--LAYIQEKSQIWEVIFTGGD 153
           L +   C   C +C  +E+ G      L  ++    E    ++ +  +  + ++  TGG+
Sbjct: 19  LSVTDRCNFRCDYCMPKEIFGDDF-VFLPKEELLTFEEMVRISKLYAQLGVKKIRITGGE 77

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+   + L ++++ L  I  ++ +   +                 LK+ G+ +Y     
Sbjct: 78  PLL--RRNLYQLIEQLNQIDGIEDIGLTTNGL-------------LLKKHGQNLYNAGLR 122

Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
            I I  +      +E   AI+        +L Q               V+ KG+NDD
Sbjct: 123 RINISLDA---IDDEVFQAINNRNIKASTILEQIDYAISIGFKIKVNVVIQKGVNDD 176


>gi|170755099|ref|YP_001781504.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
           B1 str. Okra]
 gi|226704813|sp|B1IN35|MOAA_CLOBK RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|169120311|gb|ACA44147.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
           B1 str. Okra]
          Length = 319

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 69/164 (42%), Gaps = 22/164 (13%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E +V  +   ++  ++    +        + ++ FTGG+PLIL
Sbjct: 14  VSVTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
               + K++     I  ++ +   +         +  ++++ LK+ G    + I  +   
Sbjct: 73  KD--IDKLIYNTSKINSIKDIAMTTNAI------LLEDMVEELKKDGLK-RVNISLDSLK 123

Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
           E      +      +   +I +  + G+  +   +V++KGINDD
Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMKPIKINTVIMKGINDD 167


>gi|110597800|ref|ZP_01386083.1| MiaB-like tRNA modifying enzyme [Chlorobium ferrooxidans DSM 13031]
 gi|110340525|gb|EAT59008.1| MiaB-like tRNA modifying enzyme [Chlorobium ferrooxidans DSM 13031]
          Length = 448

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 21/127 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  LK+   C   C +C     R          +++     A+  Y        E++ 
Sbjct: 146 RTRAFLKIQDGCDSGCSYCTIPLIRGRSRSLPPDEIVARAMILASSGY-------REIVL 198

Query: 150 TG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG   GD L      L ++L+ L  +  V  +R  S    ++P  ++ E I+ +  + K 
Sbjct: 199 TGVNIGDYLENGIG-LPELLRRLEKVP-VSRIRISS----IEPDVVDSEFIELVANS-KT 251

Query: 207 VYIAIHA 213
           +   +H 
Sbjct: 252 IVPHLHI 258


>gi|242309031|ref|ZP_04808186.1| tRNA modifying enzyme [Helicobacter pullorum MIT 98-5489]
 gi|239524455|gb|EEQ64321.1| tRNA modifying enzyme [Helicobacter pullorum MIT 98-5489]
          Length = 424

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 16/130 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C    + G  K      +     +  + +     E I TG +
Sbjct: 134 KSRAFIKIQEGCDFACSYCIIPSVRG--KARSFPKEKIINQIKKLTQN-GFSEFILTGTN 190

Query: 154 PLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--EAGKP 206
             + S      + + K+L+++  I  V+ LR  S    ++P +I  + +  L   +  K 
Sbjct: 191 --MGSWGKDLGENITKLLESICAIPQVKRLRLGS----LEPSQITQDFLDFLDNPKIEKH 244

Query: 207 VYIAIHANHP 216
           ++IA+    P
Sbjct: 245 LHIALQHTSP 254


>gi|253583199|ref|ZP_04860397.1| Fe-S oxidoreductase [Fusobacterium varium ATCC 27725]
 gi|251833771|gb|EES62334.1| Fe-S oxidoreductase [Fusobacterium varium ATCC 27725]
          Length = 432

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 17/141 (12%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            R  +K+   C  +C +C         K      ++    +  + E     E+I  G + 
Sbjct: 146 SRAYVKIQDGCNNFCSYCKIP--FARGKSRSRKKENIIKEIEKLVE-EGFKEIILIGIN- 201

Query: 155 LILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           L    + L +      +LK++  I  +Q +R  S    V P +I+ E I       K + 
Sbjct: 202 LGAYGEDLDEGENFESLLKSILEINKLQRVRIGS----VYPDKISDEFINMFD--NKKLM 255

Query: 209 IAIHANHPYEFSEEAIAAISR 229
             +H +      +E +  + R
Sbjct: 256 PHLHIS-LQSCDDEVLKRMRR 275


>gi|27468759|ref|NP_765396.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis ATCC 12228]
 gi|57867756|ref|YP_189412.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis RP62A]
 gi|251812031|ref|ZP_04826504.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|282875324|ref|ZP_06284197.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis SK135]
 gi|293368414|ref|ZP_06615039.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|38258081|sp|Q8CNE6|MOAA_STAES RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|81673523|sp|Q5HLY1|MOAA_STAEQ RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|27316307|gb|AAO05482.1|AE016750_87 molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis ATCC 12228]
 gi|57638414|gb|AAW55202.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis RP62A]
 gi|251804479|gb|EES57136.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
           epidermidis BCM-HMP0060]
 gi|281296089|gb|EFA88610.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis SK135]
 gi|291317489|gb|EFE57910.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis M23864:W2(grey)]
 gi|329737046|gb|EGG73301.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis VCU045]
          Length = 340

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 38/174 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G       K  +L+ ++    ++ I  +  + ++  TGG+
Sbjct: 18  ISVTDRCNFRCDYCMPKEIFGDDYTFLPKNELLTFEELTR-ISKIYAQLGVKKIRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+   + L K+++ L  I  ++ +   +                 LK+ GK +Y     
Sbjct: 77  PLL--RRNLYKLVEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLYQAGLR 121

Query: 209 -IAIHA-----NHPYEFSEEAIAAISRL------ANAGIILLSQSVLLKGINDD 250
            I +       N   E +   I A + L       + G  +    V+ KG+ND+
Sbjct: 122 RINVSLDAIEDNVFQEINNRNIKASTILEQIDYAVSIGFEVKVNVVIQKGVNDN 175


>gi|302870435|ref|YP_003839072.1| radical SAM domain-containing protein [Micromonospora aurantiaca
           ATCC 27029]
 gi|302573294|gb|ADL49496.1| Radical SAM domain protein [Micromonospora aurantiaca ATCC 27029]
          Length = 768

 Score = 47.8 bits (113), Expect = 0.003,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 12/123 (9%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEKSQIWE-----VIF 149
           +LK+   C + C  C+  E        +   ++ +    A   I E +   +     VI 
Sbjct: 14  VLKVHARCDLACDHCYVYEHADQSWRRRPVRMTPEVLRTAAGRIAEHAAAHDLPDVTVIL 73

Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            GG+PL+L  +RL +VL  LR  I  V  LR   +   V    ++ +L   L E    V 
Sbjct: 74  HGGEPLLLGAERLDEVLADLRRVIAPVTRLRLGMQTNGVL---LSEQLCDLLAEHDVAVG 130

Query: 209 IAI 211
           +++
Sbjct: 131 VSL 133


>gi|146277288|ref|YP_001167447.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
           sphaeroides ATCC 17025]
 gi|145555529|gb|ABP70142.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter
           sphaeroides ATCC 17025]
          Length = 491

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 47/241 (19%), Positives = 75/241 (31%), Gaps = 57/241 (23%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H Y  R+ + +   C + C +C R+         G     +   +     LA   E  Q
Sbjct: 58  AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117

Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174
           +  +   G GD                  L   +L             ++++     I H
Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDLVQTQLPDIKLCLSSNGLAVPDHVEEIVA--MNIDH 175

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           V  L  ++  P V   +I P +    +                +       A+  L   G
Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGRRHEGVEGAAILLARQM-----EALEMLVAHG 226

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289
           +++   SVL+ GIN     +  L R           I P      D A GT HF LT + 
Sbjct: 227 VLVKVNSVLIPGIN--EAGMVELNRIVKAKGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280

Query: 290 G 290
           G
Sbjct: 281 G 281


>gi|257784457|ref|YP_003179674.1| pyruvate formate-lyase activating enzyme [Atopobium parvulum DSM
           20469]
 gi|257472964|gb|ACV51083.1| pyruvate formate-lyase activating enzyme [Atopobium parvulum DSM
           20469]
          Length = 260

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 68/195 (34%), Gaps = 27/195 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P   L+     CP+ C +C   +      GT  S K+  A     +   +   +  TGG+
Sbjct: 25  PGTRLVVFTQGCPMRCAYCHNPDTWQFGIGTETSVKEILATFNRNRAFYRNGGITATGGE 84

Query: 154 PLILSHKRLQKVLKTLRYIKHVQ-ILRFHS----RVPIVDPQRINPELIQCLKEAGKPVY 208
           PL        + +  L    H     R H+         +P+   PE  + + +    V 
Sbjct: 85  PLAQP-----EFVGALFEAAHNDPRGRIHTCLDSSGIAYNPE--TPEKFERILDNTDLVL 137

Query: 209 IAI-------HANHPYEFSEEAIAAI-SRLANAGIILLSQSVLLKGINDDPEILA----- 255
           + I       H N   E   E   A    L   GI +L + V++ GI D  E LA     
Sbjct: 138 LDIKHSDPKGHIN-LCEVGSERPLAFGDELNRRGIKVLIRHVVVPGITDSAEELAGVGRI 196

Query: 256 -NLMRTFVELRIKPY 269
                  + L + PY
Sbjct: 197 IAHWDNVIGLDVLPY 211


>gi|194336426|ref|YP_002018220.1| molybdenum cofactor biosynthesis protein A [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194308903|gb|ACF43603.1| molybdenum cofactor biosynthesis protein A [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 326

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 45/270 (16%), Positives = 89/270 (32%), Gaps = 66/270 (24%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           HR+ D + + +   C + C +C R E  G +   ++L   +    +A + E     +V F
Sbjct: 9   HRHVDYVRIAVTSRCNLRCSYCMREEHEGRADTVSLLDKNEINTIIAVLAE-LGFSKVRF 67

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQRINPEL------IQCL 200
           TGG+PL+   + +  +++  +    ++ +   +   +     P  I+  L      I  L
Sbjct: 68  TGGEPLL--REGIAGLVREAKQHPSIKTVGLTTNGVLLDRFLPSLIDAGLDTINFSIDTL 125

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAI-SRLANAGIILLSQSVLLKGINDDPEILANLMR 259
            + G+   I        +   +    + + L  A I +    V+++ IN D         
Sbjct: 126 -DRGRYYAI-----TRRDVYRQVRNNLDNLLKTALIAVKLNVVMMRDINSDE-------- 171

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIE-------------------EGQKIVASLKEK 300
                               T  + +T+                       KI   L+  
Sbjct: 172 -------------ICRFVDFTKDYDVTVRFIELQPFDDNQIWRTGRFFGADKIRELLQHH 218

Query: 301 ISGL------CQPFYILDLPGGYGKVKIDT 324
             GL         ++   LPG  G + I  
Sbjct: 219 YPGLQAIRGSATQYFSYSLPGHKGSIAIIP 248


>gi|291276741|ref|YP_003516513.1| MiaB-like tRNA modifying enzyme [Helicobacter mustelae 12198]
 gi|290963935|emb|CBG39772.1| Putative MiaB-like tRNA modifying enzyme [Helicobacter mustelae
           12198]
          Length = 413

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 24/158 (15%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R  +K+   C   C +C     V     +   ++  E     I     + EV+ TG +  
Sbjct: 134 RAFIKIQEGCDFACSYCII-PSVRGISRSYPQARVLEQIG--ILADHGVSEVVLTGTNVG 190

Query: 156 ILSHK---RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK----EAGKPVY 208
                    + K++  +  IK +  +R  S    ++P +I+ E ++ L+    E    + 
Sbjct: 191 SYGKDFGSNIAKLIHEISKIKGILRIRIGS----LEPSQIDEEFLELLEGDFLERHLHIA 246

Query: 209 IAIH--------ANHPYEFSEEAIAAISRLANAGIILL 238
           +  H         N     + +  A + ++A+ G  + 
Sbjct: 247 LQ-HSSDRMLEIMNRHNRVASD-RALLEKIADRGFAIG 282


>gi|289428026|ref|ZP_06429730.1| radical SAM domain protein [Propionibacterium acnes J165]
 gi|295131607|ref|YP_003582270.1| radical SAM domain protein [Propionibacterium acnes SK137]
 gi|289158909|gb|EFD07109.1| radical SAM domain protein [Propionibacterium acnes J165]
 gi|291376027|gb|ADD99881.1| radical SAM domain protein [Propionibacterium acnes SK137]
 gi|332676474|gb|AEE73290.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III
           oxidase [Propionibacterium acnes 266]
          Length = 426

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 67/208 (32%), Gaps = 45/208 (21%)

Query: 93  YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            P  ++ ++   C + C+ C    +      Q       +  +   +Y +    +   I 
Sbjct: 45  KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYERPYPML---IL 101

Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           TGGD        L  +++  +    HV I       P V P     + ++ ++EAG  + 
Sbjct: 102 TGGDCFERPD--LVDLIEYAVSKGLHVSI------SPSVTP-LFTRDRVRAVQEAGVSMM 152

Query: 209 IA--------IH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDD 250
                      H          +H        + A   L   G+     +V   K I++ 
Sbjct: 153 SMSLDGGSATTHDAFRGFPGTFDH-------TVEACHMLRELGMKFQLNTVFTAKNIHEA 205

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAA 278
           P++L N     ++L    +Y        
Sbjct: 206 PQMLKNA----IDLGAMMFYTFMLVPTG 229


>gi|257467710|ref|ZP_05631806.1| Fe-S oxidoreductase [Fusobacterium ulcerans ATCC 49185]
 gi|317062003|ref|ZP_07926488.1| Fe-S oxidoreductase [Fusobacterium ulcerans ATCC 49185]
 gi|313687679|gb|EFS24514.1| Fe-S oxidoreductase [Fusobacterium ulcerans ATCC 49185]
          Length = 432

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 21/143 (14%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152
            R  +K+   C  +C +C      G  +     +  K+ E  +          EVI  G 
Sbjct: 146 SRAYVKIQDGCNNFCSYCKIPFARGKSRSRKKYNIIKEIEKLVE-----EGFKEVILIGI 200

Query: 153 DPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           + L    + L +      +LK++  I  ++ +R  S    V P +I+ E +   K   K 
Sbjct: 201 N-LGAYGEDLDEGENFESLLKSILEINKLERVRIGS----VYPDKISDEFMDMFK--NKK 253

Query: 207 VYIAIHANHPYEFSEEAIAAISR 229
           +   +H +      ++ +  + R
Sbjct: 254 LMPHLHIS-LQSCDDDVLKRMRR 275


>gi|326204018|ref|ZP_08193879.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325985785|gb|EGD46620.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 471

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 45/115 (39%), Gaps = 14/115 (12%)

Query: 97  ILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAAL-----AYIQEKSQIWEVIFT 150
           +    +H C + C++CF       S        +  +  L      Y ++  +      +
Sbjct: 84  VSFPPVHRCNLNCQYCFAGGGNNYSGDRPEFDRERIDRLLHFVYEDYFKDYKKFRFDFVS 143

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQCLKE 202
           GG+PL L+ + ++ +++ +R I      R  S+     + +   I  E+I  L  
Sbjct: 144 GGEPL-LNFEAIRYLVERVREIDG----RKQSKSSFFLVTNGTLITDEIIDYLDR 193


>gi|315230631|ref|YP_004071067.1| hypothetical protein TERMP_00867 [Thermococcus barophilus MP]
 gi|315183659|gb|ADT83844.1| hypothetical protein TERMP_00867 [Thermococcus barophilus MP]
          Length = 424

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 37/186 (19%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KS 142
           G++ R  + I ++    C + C FC   E   S+   +    D +  + +  E       
Sbjct: 112 GLIDRGTNLIQVRGSSGCNLSCIFCSVDEGPYSRTRRIDYVVDIDYLMKWFDEVARFKGK 171

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            +   +   G+PL+     + ++++ L+   +V ++   S   +     +N +L++ L E
Sbjct: 172 GLEAHLDGQGEPLLYP--FIVELVQALKEHPNVDVVSMQSNGVL-----LNDKLVEELAE 224

Query: 203 AGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           AG   + +++H                  NH  E +E        L NAGI +L   V++
Sbjct: 225 AGLDRINLSVHSLDPEKAKMLMGMKNYDLNHVLEMAE-------ALVNAGIDVLLAPVII 277

Query: 245 KGINDD 250
            G+ND+
Sbjct: 278 FGVNDN 283


>gi|289425944|ref|ZP_06427691.1| radical SAM domain protein [Propionibacterium acnes SK187]
 gi|289153487|gb|EFD02201.1| radical SAM domain protein [Propionibacterium acnes SK187]
          Length = 426

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 67/208 (32%), Gaps = 45/208 (21%)

Query: 93  YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            P  ++ ++   C + C+ C    +      Q       +  +   +Y +    +   I 
Sbjct: 45  KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYERPYPML---IL 101

Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           TGGD        L  +++  +    HV I       P V P     + ++ ++EAG  + 
Sbjct: 102 TGGDCFERPD--LVDLIEYAVSKGLHVSI------SPSVTP-LFTRDRVRAVQEAGVSMM 152

Query: 209 IA--------IH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDD 250
                      H          +H        + A   L   G+     +V   K I++ 
Sbjct: 153 SMSLDGGSATTHDAFRGFPGTFDH-------TVEACHMLRELGMKFQLNTVFTAKNIHEA 205

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAA 278
           P++L N     ++L    +Y        
Sbjct: 206 PQMLKNA----IDLGAMMFYTFMLVPTG 229


>gi|222151475|ref|YP_002560631.1| hypothetical protein MCCL_1228 [Macrococcus caseolyticus JCSC5402]
 gi|222120600|dbj|BAH17935.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 448

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    +    A   +Q      E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKEVVRQATQLVQS--GYQEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  + ++ K 
Sbjct: 199 TGGYGED---LKDYNLAQLLRDLETIDGLKRIRISS----IEASQLTDEVIDVIDKSNK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|168204736|ref|ZP_02630741.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens E str.
           JGS1987]
 gi|170663578|gb|EDT16261.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens E str.
           JGS1987]
          Length = 434

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  LK+   C  +C +C             + SKD +  L  I+        E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLEEIRSLADHGFKEIILSG 195

Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                      ++  L  +L+ +  I  ++ +R  S    +DP     ++++ +    K 
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 251 --LCPHF 255


>gi|169343507|ref|ZP_02864506.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens C str.
           JGS1495]
 gi|169298067|gb|EDS80157.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens C str.
           JGS1495]
          Length = 434

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  LK+   C  +C +C             + SKD +  L  I+        E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLEEIRSLADHGFKEIILSG 195

Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                      ++  L  +L+ +  I  ++ +R  S    +DP     ++++ +    K 
Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 251 --LCPHF 255


>gi|257094413|ref|YP_003168054.1| Radical SAM domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046937|gb|ACV36125.1| Radical SAM domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 299

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 28/160 (17%)

Query: 95  DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-----SQIWEVI 148
           D ++L +   C    C FC   EM  + + +  +  ++E  L  I+       S+I  V 
Sbjct: 21  DSLILPVTDGCSWNQCTFC---EMYTAPQKSFRARAESE-VLESIRHTGERIGSEIRRVF 76

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV-DP---QRINPELIQCLKEAG 204
              GD L+L  +RL  +L  +R   H+  +R   RV     P   +R + + ++ L  AG
Sbjct: 77  LADGDALVLPTRRLLAILDAIRT--HLPAVR---RVASYCLPRNLRRKSVDELRELAAAG 131

Query: 205 KPVYIAIHAN---------HPYEFSEEAIAAISRLANAGI 235
             +      +         H  E     + A+ +L  AGI
Sbjct: 132 LSIAYVGAESGDDEVLERVHKGESYASTVDALDKLGQAGI 171


>gi|282854858|ref|ZP_06264192.1| radical SAM domain protein [Propionibacterium acnes J139]
 gi|282582004|gb|EFB87387.1| radical SAM domain protein [Propionibacterium acnes J139]
          Length = 426

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 67/208 (32%), Gaps = 45/208 (21%)

Query: 93  YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            P  ++ ++   C + C+ C    +      Q       +  +   +Y +    +   I 
Sbjct: 45  KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYERPYPML---IL 101

Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           TGGD        L  +++  +    HV I       P V P     + ++ ++EAG  + 
Sbjct: 102 TGGDCFERPD--LVDLIEYAVSKGLHVSI------SPSVTP-LFTRDRVRAVQEAGVSMM 152

Query: 209 IA--------IH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDD 250
                      H          +H        + A   L   G+     +V   K I++ 
Sbjct: 153 SMSLDGGSATTHDAFRGFPGTFDH-------TVEACHMLRELGMKFQLNTVFTAKNIHEA 205

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAA 278
           P++L N     ++L    +Y        
Sbjct: 206 PQMLKNA----IDLGAIMFYTFMLVPTG 229


>gi|310643065|ref|YP_003947823.1| tRNA-i(6)a37 thiotransferase enzyme miab [Paenibacillus polymyxa
           SC2]
 gi|309248015|gb|ADO57582.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Paenibacillus polymyxa
           SC2]
          Length = 447

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 21/151 (13%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           +    H    R  LK+   C  +C FC      G  +    +S     A   +   +   
Sbjct: 137 VPDFAH--HTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDAASI-ITQARQLV--HAGYK 191

Query: 146 EVIFTG------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
           E++ TG      GD   + +  L  +L  L  ++ ++ +R  S    ++  +I+ +++  
Sbjct: 192 EIVLTGIHTGGYGD--DMDNYDLSDLLWDLEKVEGLERIRISS----IEASQIDEKMLDV 245

Query: 200 LKEAGKPVYIAIHANHPYEF-SEEAIAAISR 229
           LK + K   +  H + P +   +  +  + R
Sbjct: 246 LKRSNK---LVRHFHIPLQAGDDTVLKRMRR 273


>gi|301055055|ref|YP_003793266.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis CI]
 gi|300377224|gb|ADK06128.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus biovar
           anthracis str. CI]
          Length = 338

 Score = 47.4 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|229047248|ref|ZP_04192848.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
 gi|228724115|gb|EEL75460.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
          Length = 340

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 20  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L K+++ L  I  V+ +
Sbjct: 79  PLL--RRGLPKLIERLNKIDGVEDI 101


>gi|196034109|ref|ZP_03101519.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W]
 gi|195993183|gb|EDX57141.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W]
          Length = 338

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|52141964|ref|YP_084863.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
 gi|51975433|gb|AAU16983.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
          Length = 338

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|228966456|ref|ZP_04127509.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228793178|gb|EEM40728.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 340

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 20  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L K+++ L  I  V+ +
Sbjct: 79  PLL--RRGLPKLIERLHKIDGVEDI 101


>gi|229179852|ref|ZP_04307198.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           172560W]
 gi|228603533|gb|EEK61008.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           172560W]
          Length = 340

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 20  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L K+++ L  I  V+ +
Sbjct: 79  PLL--RRGLPKLIERLNKIDGVEDI 101


>gi|224476684|ref|YP_002634290.1| putative radical SAM family protein [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421291|emb|CAL28105.1| putative radical SAM family protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 448

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATTLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  +  + K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETIDGLERIRISS----IEASQLTDEVINVISNSNK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHV 257


>gi|172065715|ref|YP_001816427.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           MC40-6]
 gi|171997957|gb|ACB68874.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           MC40-6]
          Length = 371

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 47/248 (18%), Positives = 87/248 (35%), Gaps = 61/248 (24%)

Query: 85  PLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE-- 140
           PL  +    P R L L ++  C   C +C  R+  G     + SS+    A L  I    
Sbjct: 30  PLDTLAR--PLRDLRLSVIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAF 87

Query: 141 -KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV--------------------QILR 179
               + ++  TGG+PL+   + L+ +++ L  +  V                    + LR
Sbjct: 88  ISLGVEKIRLTGGEPLL--RRNLEALIERLATLTTVDGKPVEIALTTNGSLLAAKARTLR 145

Query: 180 FH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-II 236
               SRV +     I+  + + + +   PV   +             A I     AG   
Sbjct: 146 DAGLSRVTVSL-DAIDDTVFRRMSDVEVPVARVL-------------AGIEAAQAAGLAP 191

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIE 288
           +   +V+ +G NDD   +  L+R F    +      Y         G S +     +   
Sbjct: 192 VKVNAVIERGANDD--QILPLVRHFRHSGVAVRFIEY-----MDVGGASAWSGDKVVPAT 244

Query: 289 EGQKIVAS 296
             ++++ +
Sbjct: 245 RMRELIEA 252


>gi|30021670|ref|NP_833301.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           14579]
 gi|228959754|ref|ZP_04121429.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229110990|ref|ZP_04240550.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock1-15]
 gi|229128840|ref|ZP_04257816.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-Cer4]
 gi|229146135|ref|ZP_04274511.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-ST24]
 gi|29897225|gb|AAP10502.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           14579]
 gi|228637346|gb|EEK93800.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-ST24]
 gi|228654545|gb|EEL10407.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-Cer4]
 gi|228672474|gb|EEL27758.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock1-15]
 gi|228799884|gb|EEM46826.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 340

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 20  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L K+++ L  I  V+ +
Sbjct: 79  PLL--RRGLPKLIERLNKIDGVEDI 101


>gi|228916198|ref|ZP_04079768.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228843396|gb|EEM88474.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 338

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|212690793|ref|ZP_03298921.1| hypothetical protein BACDOR_00280 [Bacteroides dorei DSM 17855]
 gi|237708179|ref|ZP_04538660.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 9_1_42FAA]
 gi|237723710|ref|ZP_04554191.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. D4]
 gi|265756834|ref|ZP_06090822.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 3_1_33FAA]
 gi|212666670|gb|EEB27242.1| hypothetical protein BACDOR_00280 [Bacteroides dorei DSM 17855]
 gi|229437921|gb|EEO47998.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides dorei 5_1_36/D4]
 gi|229457732|gb|EEO63453.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 9_1_42FAA]
 gi|263233620|gb|EEZ19240.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 3_1_33FAA]
          Length = 152

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 25/60 (41%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C  +CR C   E      GT L+ +  E  +  I     +  + F+GGDPL    + L 
Sbjct: 25  GCRHHCRGCQNPESWNPSAGTPLTPEKIEKIICEINANPLLDGITFSGGDPLYHPQEFLA 84


>gi|167947614|ref|ZP_02534688.1| hypothetical protein Epers_14152 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 59

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/59 (42%), Positives = 36/59 (61%)

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +I +GGDPL+L  +RL   L  L  I H++ LR HSR+P+V P+RI+  L   L  +  
Sbjct: 1   MILSGGDPLLLDERRLAGWLDDLAAIPHLRRLRLHSRLPVVLPERISESLAHLLTASRL 59


>gi|118478814|ref|YP_895965.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           str. Al Hakam]
 gi|196044540|ref|ZP_03111775.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           03BB108]
 gi|225865551|ref|YP_002750929.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           03BB102]
 gi|118418039|gb|ABK86458.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           str. Al Hakam]
 gi|196024575|gb|EDX63247.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           03BB108]
 gi|225786709|gb|ACO26926.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           03BB102]
          Length = 338

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|47568929|ref|ZP_00239621.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus
           G9241]
 gi|47554413|gb|EAL12772.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus
           G9241]
          Length = 338

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|196038233|ref|ZP_03105542.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           NVH0597-99]
 gi|196030641|gb|EDX69239.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           NVH0597-99]
          Length = 338

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|296504074|ref|YP_003665774.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           BMB171]
 gi|296325126|gb|ADH08054.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           BMB171]
          Length = 338

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L K+++ L  I  V+ +
Sbjct: 77  PLL--RRGLPKLIERLNKIDGVEDI 99


>gi|218904693|ref|YP_002452527.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
 gi|228928618|ref|ZP_04091654.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|218538124|gb|ACK90522.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
 gi|228830937|gb|EEM76538.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 338

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|325856357|ref|ZP_08172073.1| tRNA methylthiotransferase YqeV [Prevotella denticola CRIS 18C-A]
 gi|325483541|gb|EGC86513.1| tRNA methylthiotransferase YqeV [Prevotella denticola CRIS 18C-A]
          Length = 477

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  +C +C      G  +   ++S     E A           E++ TG
Sbjct: 184 RTRYFLKVQDGCSYFCTYCTIPYARGFSRNPTIASLVSQAEEA-----AHEGGREIVLTG 238

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
              GD    + +R   ++K L  ++ ++  R  S    ++P  I+ ELI    ++     
Sbjct: 239 VNIGDFGETTGERFLDLVKALDRVEGIRRYRISS----LEPDLIDDELIAYCAQSR---A 291

Query: 209 IAIHA 213
              H 
Sbjct: 292 FMPHF 296


>gi|288555683|ref|YP_003427618.1| RNA modification enzyme, MiaB family [Bacillus pseudofirmus OF4]
 gi|288546843|gb|ADC50726.1| RNA modification enzyme, MiaB family [Bacillus pseudofirmus OF4]
          Length = 449

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +       + A   ++      E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKDVIKQATQLVEA--GYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  +  ++ +R  S    ++  ++  E+I+ +  + K 
Sbjct: 199 TGGYGED---LKDYSLARLLEDLEQVDGLKRIRISS----IEASQLTDEVIEVIDRSEK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|49478276|ref|YP_037649.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|49329832|gb|AAT60478.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 338

 Score = 47.4 bits (112), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|229031224|ref|ZP_04187231.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
 gi|228730091|gb|EEL81064.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
          Length = 338

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|168179650|ref|ZP_02614314.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
           NCTC 2916]
 gi|168184928|ref|ZP_02619592.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
           Bf]
 gi|237795372|ref|YP_002862924.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
           Ba4 str. 657]
 gi|259495862|sp|C3KXJ8|MOAA_CLOB6 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|182669280|gb|EDT81256.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
           NCTC 2916]
 gi|182672020|gb|EDT83981.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
           Bf]
 gi|229263442|gb|ACQ54475.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
           Ba4 str. 657]
          Length = 319

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 71/164 (43%), Gaps = 22/164 (13%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E ++  +   ++  ++    +        + ++ FTGG+PLIL
Sbjct: 14  VSVTDRCNLRCVYCMPPEGIIKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
            +  + K++     I  ++ +   +         +  ++++ LK+AG    + I  +   
Sbjct: 73  KN--IDKLIYNTSKISSIKDIAMTTNAI------LLEDMVEELKKAGLK-RVNISLDSLK 123

Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
           E      +      +   +I +  + G+  +   +V++KGINDD
Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMRPIKINTVIMKGINDD 167


>gi|206969370|ref|ZP_03230325.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134]
 gi|206736411|gb|EDZ53569.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134]
          Length = 338

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L K+++ L  I  V+ +
Sbjct: 77  PLL--RRGLPKLIERLNKIDGVEDI 99


>gi|146351232|ref|YP_001210459.1| molybdenum cofactor biosynthesis protein A [Arthrobacter
           nitroguajacolicus]
 gi|146218796|emb|CAL09868.1| putative MoaA-like protein [Arthrobacter nitroguajacolicus]
          Length = 376

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 36/190 (18%)

Query: 88  GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           G+V RY  R     L L   C + C +C   E M    K  V+S+++ +  +        
Sbjct: 33  GLVDRYGRRATDMRLSLTDKCNLRCTYCMPAEGMEWLSKQAVMSAEEIQRIVRVGVHFLG 92

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELI 197
           + E+  TGG+PL+ +   L  ++ +LR          H  +PI     +        +  
Sbjct: 93  VRELRLTGGEPLVRAD--LLDIISSLRQA--------HPELPIS----MTTNGIGLDKKA 138

Query: 198 QCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGI 247
             LK AG   + +++ + H   F++           AG+          +   +VL++GI
Sbjct: 139 AGLKAAGLSRINVSLDSLHEETFAQLTRRPFLAKVLAGVDAAWAAGLGPVKINAVLMRGI 198

Query: 248 ND--DPEILA 255
           ND   P +LA
Sbjct: 199 NDVESPALLA 208


>gi|75762416|ref|ZP_00742285.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228902038|ref|ZP_04066203.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           IBL 4222]
 gi|74490091|gb|EAO53438.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228857624|gb|EEN02119.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           IBL 4222]
          Length = 340

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 20  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L K+++ L  I  V+ +
Sbjct: 79  PLL--RRGLPKLIERLHKIDGVEDI 101


>gi|228985250|ref|ZP_04145415.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228774545|gb|EEM22946.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 337

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G+      +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGADYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K+++ L  I+ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LPKLIERLAKIEGIKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  +  +     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDYVFQKINGRNVSTKPVLKGMEEAKAAGLEVKVNMVVKKGMNDS 175


>gi|218234531|ref|YP_002368381.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264]
 gi|218162488|gb|ACK62480.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264]
          Length = 338

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L K+++ L  I  V+ +
Sbjct: 77  PLL--RRGLPKLIERLNKIDGVEDI 99


>gi|56478522|ref|YP_160111.1| molybdenum cofactor biosynthesis protein A [Aromatoleum aromaticum
           EbN1]
 gi|56314565|emb|CAI09210.1| Molybdenum cofactor biosynthesis protein A [Aromatoleum aromaticum
           EbN1]
          Length = 359

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 75/185 (40%), Gaps = 30/185 (16%)

Query: 85  PLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAAL 135
           P  G +    DR +    + +   C   C +C  R + G+      +  +LS ++     
Sbjct: 23  PTDGPLKDRRDRAVQDLRISVTDRCNFRCIYCMPRSVFGADYPFLPRKELLSFEEITRIA 82

Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
                   + ++  TGG+PL+   K ++ +++ L  I  V+ L   +         + P+
Sbjct: 83  RRF-ATRGVRKIRITGGEPLL--RKHVENLIEMLAQIPDVE-LTLTTNGV------LLPK 132

Query: 196 LIQCLKEAGK-PVYIAIHA---------NHPYEFSEEAIAAISRLANAGI-ILLSQSVLL 244
           + + LK+AG   V I++ A         N         +  I+   +AG+  +    V+ 
Sbjct: 133 MARTLKDAGLDRVTISLDAIDDPTFRLMNDADFPVAAVLEGIAAAKDAGLGPIKVNMVVK 192

Query: 245 KGIND 249
           +G+ND
Sbjct: 193 RGVND 197


>gi|291087896|ref|ZP_06347812.2| radical SAM domain protein [Clostridium sp. M62/1]
 gi|291073644|gb|EFE11008.1| radical SAM domain protein [Clostridium sp. M62/1]
          Length = 322

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 27/183 (14%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSS 128
           E E+ + +N     +GIV+R P      ++++   C    C FC    M  ++   V S 
Sbjct: 22  ELENRLKENRKMKYEGIVYRPPSEARSLIVQVTIGCAHNTCTFC---NMYKAKDFRVRSM 78

Query: 129 KDTEAALAYIQEKSQ----IWEVIFTGGDPLILSHKRLQKVLKTLRYI-KH-VQILRFHS 182
            +    L   +        + +V    GD L+L  ++L  +L  +R +  + V++  + +
Sbjct: 79  DEIMEDLR--EAHDGYGAYVQKVFLADGDALVLQTEKLLAILDAVRELFPNCVRVASYGT 136

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANA 233
              I+   R + E ++ LKEAG  +      +   E          + E   A  +L   
Sbjct: 137 AQDIL---RKSEEELRQLKEAGLGIVYVGAESGDDEILREINKGVTARELKEAGQKLKRC 193

Query: 234 GII 236
           GI 
Sbjct: 194 GIQ 196


>gi|257095940|ref|YP_003169581.1| nitrogenase cofactor biosynthesis protein NifB [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257048464|gb|ACV37652.1| nitrogenase cofactor biosynthesis protein NifB [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 505

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 66/222 (29%), Gaps = 61/222 (27%)

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------M 117
           +  +   P   ED              H Y  R+ + +   C + C +C R+        
Sbjct: 36  RARVQDHPCYSED-------------AHHYFARMHVAVAPACNIQCHYCNRKYDCANESR 82

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR--------------- 161
            G     +   +     LA      Q+  +   G GDPL    +                
Sbjct: 83  PGVVSEVLTPDQAVRKTLAVAATIPQMSVLGIAGPGDPLANPERTFETFRQLALKAPDIK 142

Query: 162 ---------LQKVLKTLRY--IKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPV 207
                    L   ++ L    I HV  +  +     VDP    RI P +    +      
Sbjct: 143 LCVATNGLVLPDYVEELARYNIDHV-TITIN----CVDPAIGARIYPWIFWKNRRVFGHE 197

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
             AI          +    +  L   GI++   SVL+ G+ND
Sbjct: 198 AAAI-------LIAQQQKGLEMLTARGILVKVNSVLIPGVND 232


>gi|225018723|ref|ZP_03707915.1| hypothetical protein CLOSTMETH_02673 [Clostridium methylpentosum
           DSM 5476]
 gi|224948451|gb|EEG29660.1| hypothetical protein CLOSTMETH_02673 [Clostridium methylpentosum
           DSM 5476]
          Length = 436

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 40/163 (24%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  ++    + ++    D +              + F  G+ + L
Sbjct: 79  LMDKQRSCKNKCIFCFIDQLPKGMRKSLYFKDDDDR-------------LSFLFGNYITL 125

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PEL-IQCLKEAGKPVYIAIHANH 215
           ++     + +    I  +  LR     P+        PEL ++ +K              
Sbjct: 126 TN-----ITEE--EIDRIIKLRI---SPVNISVHTTNPELRVRMMKNPR----------- 164

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
               + +++  I +LA+AGI L  Q VL  GIND  E+  +L 
Sbjct: 165 ----AGDSLRFIKKLADAGIALNCQLVLCPGINDGAELERSLR 203


>gi|218898660|ref|YP_002447071.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
 gi|218544787|gb|ACK97181.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
          Length = 338

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L K+++ L  I  V+ +
Sbjct: 77  PLL--RRGLPKLIERLHKIDGVEDI 99


>gi|229174229|ref|ZP_04301763.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus MM3]
 gi|228609247|gb|EEK66535.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus MM3]
          Length = 338

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|226223665|ref|YP_002757772.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           Clip81459]
 gi|254823680|ref|ZP_05228681.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           FSL J1-194]
 gi|254853066|ref|ZP_05242414.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           FSL R2-503]
 gi|254992565|ref|ZP_05274755.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           FSL J2-064]
 gi|255521212|ref|ZP_05388449.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           FSL J1-175]
 gi|259495866|sp|C1L1W8|MOAA_LISMC RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|225876127|emb|CAS04833.1| Putative molybdenum cofactor biosynthesis protein A [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258606413|gb|EEW19021.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           FSL R2-503]
 gi|293592902|gb|EFG00663.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           FSL J1-194]
          Length = 333

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  +  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LK+AG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKDAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +    G   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170


>gi|317051390|ref|YP_004112506.1| MiaB-like tRNA modifying enzyme YliG [Desulfurispirillum indicum
           S5]
 gi|316946474|gb|ADU65950.1| MiaB-like tRNA modifying enzyme YliG [Desulfurispirillum indicum
           S5]
          Length = 440

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 71/193 (36%), Gaps = 30/193 (15%)

Query: 57  ARQFIPQKEELNILPEEREDPIGDN------NHSPLKGIVHRYPDRIL--------LKLL 102
            RQ +P+ +      E   + IGD       N +P   +     +R+L        LK+ 
Sbjct: 90  LRQELPEVDIFIDTKESSMESIGDQLSRRLVNFTPQDHLEALPGERLLTTPSYMAYLKIA 149

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILS 158
             C   C +C    + G  + +V   K    A       S + E++    D     L L 
Sbjct: 150 EGCSNTCTYCVIPRIRGPYQ-SVPQEKLVSEARE--LAASGVRELVLISQDSTEYGLDLY 206

Query: 159 HKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP 216
            KR L  +L  L  I+++  +R    V    P   + ELI+ +    K   Y+ I   H 
Sbjct: 207 GKRSLAPLLAELAKIENLHWIR----VLYTYPNHFDDELIETIAREPKICKYVDIPFQH- 261

Query: 217 YEFSEEAIAAISR 229
              S   +  ++R
Sbjct: 262 --MSNSVLKRMNR 272


>gi|78189217|ref|YP_379555.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium
           chlorochromatii CaD3]
 gi|78171416|gb|ABB28512.1| Nitrogenase cofactor biosynthesis protein NifB [Chlorobium
           chlorochromatii CaD3]
          Length = 423

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 43/217 (19%), Positives = 76/217 (35%), Gaps = 55/217 (25%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE----KSQIWEVI 148
            RI L +   C + C +C R+    ++    ++SK    + AL Y+ +       I  V 
Sbjct: 20  GRIHLPVAPKCNIQCNYCSRKFDCMNENRPGVTSKVLSPQQALYYLDQAMELSPNIAVVG 79

Query: 149 FTG-GDPLILSHKRLQK------------------------VLKTLRY--IKHVQILRFH 181
             G GDP     + ++                          +  L    + HV  +  +
Sbjct: 80  IAGPGDPFANPDETMETLRLVRAKYPEMLLCVATNGLDLLPYIDELARLQVSHV-TITIN 138

Query: 182 SRVPIVDPQRINPELIQCLK-----EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
                +DP+ I  E+   ++       GK     +  N+  E       A+ RL   G+ 
Sbjct: 139 ----AIDPE-IGQEIYAWVRYNKKMYRGKDAAKVL-INNQLE-------ALKRLKEVGVT 185

Query: 237 LLSQSVLLKGIND-DPEILANLMRTFVE--LRIKPYY 270
               S+++ GIND     +A+ +       L   PYY
Sbjct: 186 AKVNSIIIPGINDAHVITVASKVAELGADILNCLPYY 222


>gi|206975468|ref|ZP_03236381.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           H3081.97]
 gi|222097023|ref|YP_002531080.1| molybdenum cofactor biosynthesis protein a [Bacillus cereus Q1]
 gi|206746370|gb|EDZ57764.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           H3081.97]
 gi|221241081|gb|ACM13791.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus Q1]
          Length = 338

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|315506786|ref|YP_004085673.1| radical sam domain protein [Micromonospora sp. L5]
 gi|315413405|gb|ADU11522.1| Radical SAM domain protein [Micromonospora sp. L5]
          Length = 768

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 12/123 (9%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEKSQIWE-----VIF 149
           +LK+   C + C  C+  E        +   ++ +    A   I E +   +     VI 
Sbjct: 14  VLKVHARCDLACDHCYVYEHADQSWRRRPVRMTPEVLRTAAGRIAEHAAAHDLPDVTVIL 73

Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            GG+PL+L  +RL +VL  LR  I  V  LR   +   V    ++  L   L E    V 
Sbjct: 74  HGGEPLLLGAERLGEVLADLRRVIDPVTRLRLGMQTNGVL---LSERLCDLLAEHDVAVG 130

Query: 209 IAI 211
           +++
Sbjct: 131 VSL 133


>gi|167037275|ref|YP_001664853.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167040032|ref|YP_001663017.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
           X514]
 gi|300914120|ref|ZP_07131436.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
           X561]
 gi|307724644|ref|YP_003904395.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
           X513]
 gi|320115692|ref|YP_004185851.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
 gi|166854272|gb|ABY92681.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
           X514]
 gi|166856109|gb|ABY94517.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|300889055|gb|EFK84201.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
           X561]
 gi|307581705|gb|ADN55104.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp.
           X513]
 gi|319928783|gb|ADV79468.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
           brockii subsp. finnii Ako-1]
          Length = 317

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 26/166 (15%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E +       +L +++    +  I  +  I +V FTGG+PL+ 
Sbjct: 14  VSVTDRCNLRCIYCMPEEGIPKKDHNEILRNEEILKIIR-ISAELGIKKVRFTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
             K ++ ++     IK ++ +      +++          E+   LKEAG K V I++ +
Sbjct: 72  -RKGIENIIYETSKIKGIEDIALTTNGTKL---------YEMADTLKEAGLKRVNISLDS 121

Query: 214 ---NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
              +     +     ++   AI +  + G+  +   +V++KGINDD
Sbjct: 122 LKKDRYRMITRLGNIDDVFRAIDKSLSIGLEPVKINTVVIKGINDD 167


>gi|257064532|ref|YP_003144204.1| predicted Fe-S oxidoreductase [Slackia heliotrinireducens DSM
           20476]
 gi|256792185|gb|ACV22855.1| predicted Fe-S oxidoreductase [Slackia heliotrinireducens DSM
           20476]
          Length = 384

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 70/182 (38%), Gaps = 32/182 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKG--TVLSSKDTEAALAYIQEKSQIWE----VIFTGG 152
             LL  C   C+ C+     G +      +S +  +  L+ I++  + +     +  +GG
Sbjct: 10  WHLLDDCDQRCKHCYI--FSGDENEELNRMSFEQMQQTLSNIEDFCETFGREPYLYISGG 67

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-- 210
           DP++         L  L      + +RF     + +P  +  E+ + L ++G   Y    
Sbjct: 68  DPILHPD---FWNLMDLLK---SKGIRF---TIMGNPFHLTDEVCERLHDSGCVRYQMSI 118

Query: 211 -----IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTFV 262
                 H     P  +  E +A I  LA  GI     S+++  ++D +   L  ++   V
Sbjct: 119 DGNRQTHDWFRKPGSYD-ETLARIPMLARHGIR----SIIMTTVSDVNAAELPEIIDAVV 173

Query: 263 EL 264
           E 
Sbjct: 174 EA 175


>gi|313668419|ref|YP_004048703.1| hypothetical protein NLA_11150 [Neisseria lactamica ST-640]
 gi|313005881|emb|CBN87337.1| conserved hypothetical protein [Neisseria lactamica 020-06]
          Length = 369

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 8/96 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIWE----V 147
           D +LLK+   C + C +C+   +          +LS K  +     + +          +
Sbjct: 3   DTVLLKVASRCNLNCTYCYVYHLGDDGWKDNPKLLSEKSIDDIEKSLFDLYSFQGKSFAI 62

Query: 148 IFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHS 182
           +  GG+P +L   RL+ +LK LR  +     +   +
Sbjct: 63  VLHGGEPFLLPKHRLEYLLKKLRHRLPEYTTVSIQT 98


>gi|261400665|ref|ZP_05986790.1| putative radical SAM [Neisseria lactamica ATCC 23970]
 gi|269209574|gb|EEZ76029.1| putative radical SAM [Neisseria lactamica ATCC 23970]
          Length = 369

 Score = 47.0 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 8/96 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIWE----V 147
           D +LLK+   C + C +C+   +          +LS K  +     + +          +
Sbjct: 3   DTVLLKVASRCNLNCTYCYVYHLGDDGWKDNPKLLSEKSIDDIEKSLFDLYSFQGKSFAI 62

Query: 148 IFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHS 182
           +  GG+P +L   RL+ +LK LR  +     +   +
Sbjct: 63  VLHGGEPFLLPKHRLEYLLKKLRHRLPEYTTVSIQT 98


>gi|217960969|ref|YP_002339537.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
 gi|217063865|gb|ACJ78115.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
          Length = 338

 Score = 47.0 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKIDGVEDI 99


>gi|302874325|ref|YP_003842958.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans
           743B]
 gi|307689408|ref|ZP_07631854.1| RNA modification enzyme, MiaB family protein [Clostridium
           cellulovorans 743B]
 gi|302577182|gb|ADL51194.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans
           743B]
          Length = 433

 Score = 47.0 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 23/129 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  LK+   C  +C +C             + SK+ E  +  +     +   E+I +G
Sbjct: 141 KTRAFLKVQDGCNRFCSYCLI-----PYARGAVCSKNPETIIDEVNKLADNGFKEIILSG 195

Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                   D  +   K L  +++ +  I  ++ +R  S    V+P+    E+I+ +    
Sbjct: 196 IHIASYGVD--LEERKTLMDIIEEIHKINGIKRIRIGS----VEPRFFTDEVIEKMASME 249

Query: 205 KPVYIAIHA 213
           K   +  H 
Sbjct: 250 K---MCPHF 255


>gi|167630503|ref|YP_001681002.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1]
 gi|167593243|gb|ABZ84991.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1]
          Length = 446

 Score = 47.0 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 14/151 (9%)

Query: 57  ARQFIPQKEELNILPEEREDPIGD----NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
            R  I    E +    E  + + D         L     R   R  +K+   C +YC +C
Sbjct: 105 RRSAIVDLVEEHRRSGETVNTVYDSCRIERFEELPAAPERSRARATIKIQDGCDLYCTYC 164

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-PLILSH--KRLQKVLKTL 169
                 G  +   +     E A           E++ +G       S     L K++  L
Sbjct: 165 IIPYARGPVRSRRI-ESVVEEATR--LTGEGFKEIVLSGIHLGAYGSDFNADLAKLIVEL 221

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
             I  ++ +R  S    V+PQ   PEL++ +
Sbjct: 222 CRIPGLRRIRVGS----VEPQEFTPELLEAV 248


>gi|149193779|ref|ZP_01870877.1| MiaB-like tRNA modifying enzyme [Caminibacter mediatlanticus TB-2]
 gi|149135732|gb|EDM24210.1| MiaB-like tRNA modifying enzyme [Caminibacter mediatlanticus TB-2]
          Length = 405

 Score = 47.0 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 18/159 (11%)

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
           KEE++   + +   +GD +    K +      +  +K+   C   C +C   ++ G    
Sbjct: 96  KEEIDKFLDFKGINLGDFDFVNKKIVESFDKTKAFIKIQEGCDFECAYCIIPKVRG---- 151

Query: 124 TVLSSKDTEA--ALAYIQ--EKSQIWEVIFTGGDPLIL---SHKRLQKVLKTLRYIKHVQ 176
              SS+  E    L  I+    + I E + TG +       ++  L K+++ +  I+ V+
Sbjct: 152 ---SSRSIEESLILEEIKKLRDNGISEFVLTGINMGSYGKDTNTSLSKLIEKISNIRGVK 208

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
            +R  S    ++P +I+  LI+  +      ++ I   H
Sbjct: 209 RIRLGS----LEPSQIDDRLIELTQNGILEKHLHIALQH 243


>gi|220929654|ref|YP_002506563.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum
           H10]
 gi|219999982|gb|ACL76583.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum
           H10]
          Length = 454

 Score = 47.0 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 14/128 (10%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            ++   R  LK+   C  +C +C      G  +       D    + ++ E   + E++ 
Sbjct: 159 TYKERTRAYLKIQEGCSQFCSYCIIPYARGPIRSR--KPDDIIEEVKHLAESGFL-EIVL 215

Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           TG         +    L  ++K    I  ++ +R  S    ++P  I  E +  +    K
Sbjct: 216 TGIHLASFGREIKDTNLLDIIKKTHSIDGIKRIRLGS----LEPTTITEEFVDAVGRLPK 271

Query: 206 PVYIAIHA 213
              +  H 
Sbjct: 272 ---LCPHF 276


>gi|254000035|ref|YP_003052098.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp.
           SIP3-4]
 gi|253986714|gb|ACT51571.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp.
           SIP3-4]
          Length = 336

 Score = 47.0 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 20/177 (11%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R  D I L +   C   C +C   +M    +  VLS ++    +  I  +  + +V  TG
Sbjct: 17  RKVDYIRLSITDRCDFRCVYCMAEDMTFLPRDEVLSLEECARLVK-IFVQMGVSKVRITG 75

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
           G+PL+  + +   + + + ++  ++ L     V   +  ++  +    L++AG K + I+
Sbjct: 76  GEPLVRKNAQ--WLFEEIGHLPGLKEL-----VVTTNGSQLEHQ-AAALRQAGVKRINIS 127

Query: 211 IHANHPYEFSEEAI--------AAISRLANAGII-LLSQSVLLKGINDDPEILANLM 258
           + + +   F +             I    +AG   +   SV+++G+NDD E L  L 
Sbjct: 128 VDSLNADRFRKITRVGDLSKVLRGIQAAKDAGFDNIKLNSVIMRGVNDD-EALDLLR 183


>gi|319790216|ref|YP_004151849.1| Radical SAM domain protein [Thermovibrio ammonificans HB-1]
 gi|317114718|gb|ADU97208.1| Radical SAM domain protein [Thermovibrio ammonificans HB-1]
          Length = 376

 Score = 47.0 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 74/201 (36%), Gaps = 36/201 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  +  ++   C + C  C R       +    S++D +  L  I + S+   V+ TGG+
Sbjct: 9   PKWVAWEITRRCNLQCIHC-RSASTMESEQGDFSTEDGKKLLDDIAKLSKPT-VVLTGGE 66

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRV-----PIVDPQRINPELIQCLKEAG-KPV 207
           PL      L++ +  L          + +++        +   ++ E+ + +KE G + V
Sbjct: 67  PL------LREDIWELAE--------YGTKLGFRMCIATNGTLVDDEVCRKMKEVGIRMV 112

Query: 208 YIAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANL 257
            +++  + P E  ++             A       GI  L  S   K    +   + N+
Sbjct: 113 SLSLDGSTP-EIHDDFRKQPGAYEGVIKAAELFNKHGIPFLINSSFTK---RNAHDIPNV 168

Query: 258 MRTFVELRIKPYYLHHPDLAA 278
            +   EL  K +Y+       
Sbjct: 169 YKKARELGAKAWYMFLVLPVG 189


>gi|327314071|ref|YP_004329508.1| tRNA methylthiotransferase YqeV [Prevotella denticola F0289]
 gi|326945694|gb|AEA21579.1| tRNA methylthiotransferase YqeV [Prevotella denticola F0289]
          Length = 450

 Score = 47.0 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  +C +C      G  +   ++S     E A           E++ TG
Sbjct: 157 RTRYFLKVQDGCSYFCTYCTIPYARGFSRNPTIASLVSQAEEA-----AHEGGREIVLTG 211

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
              GD    + +R   ++K L  ++ ++  R  S    ++P  I+ ELI    ++     
Sbjct: 212 VNIGDFGETTGERFLDLVKALDRVEGIRRYRISS----LEPDLIDDELIAYCAQSR---A 264

Query: 209 IAIHA 213
              H 
Sbjct: 265 FMPHF 269


>gi|110637727|ref|YP_677934.1| GTP cyclohydrolase subunit MoaA [Cytophaga hutchinsonii ATCC 33406]
 gi|110280408|gb|ABG58594.1| GTP cyclohydrolase subunit MoaA [Cytophaga hutchinsonii ATCC 33406]
          Length = 317

 Score = 47.0 bits (111), Expect = 0.005,   Method: Composition-based stats.
 Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 23/210 (10%)

Query: 99  LKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L  VC + C +C     +       VL+ ++  + +  I  +  +  +  TGG+PL+ 
Sbjct: 20  VSLTAVCNMACVYCVTPGAIHTPSAEKVLTVEEYLSIIKNIHSQVGLKTIRLTGGEPLLF 79

Query: 158 SH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC---LKEAGKPVYIAIHA 213
                L K +K L  I  +++     ++  V    +   L      L      V+  I  
Sbjct: 80  KELPVLIKGIKAL-GITDIKLTTNGLKLLSVLDALVEAGLTSINISLDALDPAVFRNITK 138

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND----------DPEILANLMRTFVE 263
           N         +  I    + GI +   +V+L+G+ND              +       ++
Sbjct: 139 NQDLR---AVLDGIEAARHKGIAIKINTVVLRGVNDHQIIPLLEYASARNIPIRFLELMK 195

Query: 264 LRIKPY----YLHHPDLAAGTSHFRLTIEE 289
           +    Y    Y    D          ++ +
Sbjct: 196 MGYLHYNESDYFFGMDDIVEKISSVTSVAK 225


>gi|323345215|ref|ZP_08085438.1| 2-methylthioadenine synthetase [Prevotella oralis ATCC 33269]
 gi|323093329|gb|EFZ35907.1| 2-methylthioadenine synthetase [Prevotella oralis ATCC 33269]
          Length = 452

 Score = 46.6 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C      G  +   ++S   E A   + E     E++ TG  
Sbjct: 160 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTIASL-VEQARQAVAEGG--KEIVLTGVN 216

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD  + +++R   ++K L  ++ V+  R  S    ++P  ++ ELI+    +       
Sbjct: 217 IGDFGVTTNERFIDLVKALDKVEGVKRYRISS----LEPDLLDDELIEYCARSR---AFM 269

Query: 211 IHA 213
            H 
Sbjct: 270 PHF 272


>gi|170760513|ref|YP_001787335.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
           A3 str. Loch Maree]
 gi|226704814|sp|B1KU20|MOAA_CLOBM RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|169407502|gb|ACA55913.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum
           A3 str. Loch Maree]
          Length = 319

 Score = 46.6 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 70/164 (42%), Gaps = 22/164 (13%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E +V  +   ++  ++    +        + ++ FTGG+PLIL
Sbjct: 14  VSVTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
            +  + K++     I  ++ +   +         +  + ++ LK+AG    + I  +   
Sbjct: 73  KN--IDKLIYNTSKISSIKDIAMTTNAI------LLEDRVEELKKAGLK-RVNISLDSLK 123

Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
           E      +      +   +I +  + G+  +   +V++KGINDD
Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMRPIKINTVIMKGINDD 167


>gi|313202011|ref|YP_004040669.1| molybdenum cofactor biosynthesis protein a [Methylovorus sp. MP688]
 gi|312441327|gb|ADQ85433.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp. MP688]
          Length = 336

 Score = 46.6 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 17/168 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R  D I L +   C   C +C   +M    +  VLS ++    +  I  +  + +V  TG
Sbjct: 17  RKVDYIRLSITDRCDFRCVYCMAEDMTFLPRDEVLSLEECARLVK-IFVQMGVSKVRITG 75

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+PL+  + +   + + + ++  ++ L     V   +  ++  +     K   K + I++
Sbjct: 76  GEPLVRKNAQ--WLFEEIGHLPGLKEL-----VVTTNGSQLEHQAAALRKAGVKRINISV 128

Query: 212 HANHPYEFSEEAI--------AAISRLANAGII-LLSQSVLLKGINDD 250
            + +   F               I     AG   +   SV+++G+NDD
Sbjct: 129 DSLNAERFRNITRVGDLSKVLRGIQAAKEAGFDNIKLNSVIMRGVNDD 176


>gi|294345246|emb|CBL51476.1| conserved radical SAM domain containing hypothetical protein
           [Thermus thermophilus]
          Length = 375

 Score = 46.6 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/222 (19%), Positives = 81/222 (36%), Gaps = 39/222 (17%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           RYP  +  ++ + C + CR C    M     G  LS+++    +  +        ++ TG
Sbjct: 8   RYPYLVAWEVTNACLLACRHCRASAMPHPLPGE-LSTEEGLRLIEEVATYRPKPLLLLTG 66

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQCLKEAGK-PV 207
           GDPL      L  +++  R            +V   P   P  +  E++  LKEAG   +
Sbjct: 67  GDPLAREDLFL--LMERARA--------LGLKVGLTPAATP-LLTREMVFRLKEAGVTRL 115

Query: 208 YIAIHANHPYE---FSEEA------IAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            +++    P     F  EA      + A+S    AG+     + + +   ++   +  L 
Sbjct: 116 ALSLDGASPESHDAFRGEAGTFQRTLEALSWAKEAGLPTQVNTTVTR---ENWPEIQALP 172

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
               E  +  + L           F + +  G  ++  L  K
Sbjct: 173 DLLAEKGVVLWSLF----------FLVPVGRG-ALLKQLSAK 203


>gi|218780597|ref|YP_002431915.1| molybdenum cofactor biosynthesis protein A [Desulfatibacillum
           alkenivorans AK-01]
 gi|218761981|gb|ACL04447.1| molybdenum cofactor biosynthesis protein A [Desulfatibacillum
           alkenivorans AK-01]
          Length = 315

 Score = 46.6 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 86/256 (33%), Gaps = 59/256 (23%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E +       VLS ++  A +        I +V  TGG+PL+ 
Sbjct: 1   MSVTDRCNLRCFYCVPEEGLPFLGHKDVLSYEEITAIVQAGVRH-GIQKVRITGGEPLV- 58

Query: 158 SHKRLQKVLKTLRYIKHVQIL-------RFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
             K +++++ ++  +  ++ L       R  S             +   LK+AG      
Sbjct: 59  -RKGIEELVASISALPEIKDLAMTTNGVRLAS-------------MAHDLKKAGLHRVNV 104

Query: 211 -------------IHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD--PEIL 254
                           NH  E        I    +AG+  +    V + G+ND    +  
Sbjct: 105 SLDSMKPEVFEKITGRNHCQE----VKEGIEAALDAGLTPVKINVVAVAGVNDSEFADFA 160

Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHF----RLTIEEGQKIVA-SLKEKIS----G-L 304
              M   V +R   Y            H+     ++  E ++I+   L         G L
Sbjct: 161 KLTMDKPVSVRFIEY-----MPIGKNMHWAEDRSISSREIREIIEKQLGPMTPVTEHGPL 215

Query: 305 CQPFYILDLPGGYGKV 320
             P     LPG  G++
Sbjct: 216 DGPARRFSLPGAQGEI 231


>gi|82751179|ref|YP_416920.1| hypothetical protein SAB1448c [Staphylococcus aureus RF122]
 gi|82656710|emb|CAI81137.1| conserved hypothetical protein [Staphylococcus aureus RF122]
          Length = 448

 Score = 46.6 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  I  ++ +R  S    ++  ++  E+I  L+ + K 
Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLEMINGLERIRISS----IEASQLTDEVIDVLERSTK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|325960236|ref|YP_004291702.1| molybdenum cofactor biosynthesis protein A [Methanobacterium sp.
           AL-21]
 gi|325331668|gb|ADZ10730.1| molybdenum cofactor biosynthesis protein A [Methanobacterium sp.
           AL-21]
          Length = 320

 Score = 46.6 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 74/185 (40%), Gaps = 36/185 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + + + C V C +C    +V   +   ++ K+ E  +  + ++  I ++  +GG+PLI  
Sbjct: 23  ISITNRCNVKCFYCHHDGIV--PQDYEMTPKEIERIVT-VAKELGIEKIRLSGGEPLIRE 79

Query: 159 HKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
                 ++  +  I +V  + +   +   +++         + L EAG    + +  +  
Sbjct: 80  D-----IVDMVSKIANVGFRDISLTTNGILLEKY------AEKLHEAGLT-RVNVSFDT- 126

Query: 217 YEFSEEAIAAISRL-----ANAGI---------ILLSQSVLLKGINDDPEILANLMRTFV 262
              + E    I++      A AGI          +    V++KGIND+   + ++ +   
Sbjct: 127 --LNPETYRFITKRDYMENAKAGIQKAVESGLNPVKVNMVVMKGINDN--EIWDMFQFCR 182

Query: 263 ELRIK 267
           E    
Sbjct: 183 ETGAI 187


>gi|116672386|ref|YP_833319.1| radical SAM domain-containing protein [Arthrobacter sp. FB24]
 gi|116612495|gb|ABK05219.1| Radical SAM domain protein [Arthrobacter sp. FB24]
          Length = 533

 Score = 46.6 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 33/207 (15%)

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q IP +        +   P+ +     L  +  ++   +L  ++  C + C  CF    
Sbjct: 92  KQHIPDQA-------DNFRPVPEAYAYGLPAMQTQHTCILLQDIIEHCNLRCPTCFTSSG 144

Query: 118 VGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
              Q    L+    + +A LA  +E  ++  ++ +GG+P +     L ++L+ L      
Sbjct: 145 PQLQGVAPLAEVLANVDARLA--RENGRLDVLMLSGGEPTLYP--HLAELLEELVARP-- 198

Query: 176 QILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHANHP-YE---------FSEEA 223
            I+R    +   +   +  + EL+  L +    V + +  + P  E          +   
Sbjct: 199 -IVRI---MVNSNGMLMATDDELLALLAKHRDRVEVYLQYDGPSKEASIHHRGGDLTRFK 254

Query: 224 IAAISRLANAGI-ILLSQSVLLKGIND 249
            AAISRL+ AG+   L+ +  L G+ND
Sbjct: 255 DAAISRLSEAGVFTTLTMTATL-GVND 280


>gi|301166467|emb|CBW26043.1| molybdenum cofactor biosynthesis protein A [Bacteriovorax marinus
           SJ]
          Length = 328

 Score = 46.6 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 68/167 (40%), Gaps = 17/167 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R   ++ + L   C + C +C   +     +   LS  +    +  + +   + EV  TG
Sbjct: 25  RKIRKLRISLTDKCNLRCHYCMPLDATFMDEQRYLSVDEYAQVVEDLCKF-GLEEVRITG 83

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+PL+   K  + +++ +  +    + +       V   +   +L +        + I++
Sbjct: 84  GEPLL--RKSFKSLVEKIGSLP---LKKIGLTTNAVLLHKYIEDLCEY---RVHHINISL 135

Query: 212 HANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
            + +   F++             IS   +AG+ +   +VL+KG+NDD
Sbjct: 136 DSLNEDRFNKITRSKNFKKVLENISLAKSAGLNIKINTVLMKGVNDD 182


>gi|302347912|ref|YP_003815550.1| Predicted Fe-S oxidoreductase [Acidilobus saccharovorans 345-15]
 gi|302328324|gb|ADL18519.1| Predicted Fe-S oxidoreductase [Acidilobus saccharovorans 345-15]
          Length = 387

 Score = 46.6 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 32/204 (15%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTG 151
            P  +  +    CP+ C  C R E +       LS  +    +  + E  + + ++ FTG
Sbjct: 12  KPLLVFWETTKACPLACIHC-RAEAITRPLPGELSHAEGLELVRQVAEFGRPYPILVFTG 70

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD---PQRINPELIQCLKEAGKPVY 208
           GDPL  S + + +++     +           VP+     P R   + +  +  +GK   
Sbjct: 71  GDPL--SREDIWELVDEAHSLG----------VPVAMAPSPSRALLDNLDRIA-SGKVSA 117

Query: 209 IAIHANHPY-EFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANL 257
           ++I  +HP  E  ++             AI  L   G+ +   + +++      + L  +
Sbjct: 118 VSISIDHPSPEVHDKVRRYQGSWEAGVTAIRELIRRGVKVQVNTAVMR---STVDGLPGM 174

Query: 258 MRTFVELRIKPYYLHHPDLAAGTS 281
           ++   +L +  + + +        
Sbjct: 175 VKLLKDLGVDVWEVFYLVPVGRAE 198


>gi|251780327|ref|ZP_04823247.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
 gi|243084642|gb|EES50532.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT
           E Beluga']
          Length = 434

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 45/127 (35%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G+   +    K  E     + E     EVI +G  
Sbjct: 141 KTRAFLKIQDGCNRFCTFCLIPYARGA-TCSKKPEKVIEEVKK-LAEH-GFKEVILSGIH 197

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D  + +   L  +L+ +  I  +  +R  S    ++P     E+I  +K   K 
Sbjct: 198 TASYGVD--LGTDVTLISLLEDIEKIDGIDRVRIGS----IEPAFFTDEVINKIKNMKK- 250

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 251 --LCPHF 255


>gi|325662160|ref|ZP_08150778.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331085957|ref|ZP_08335040.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325471609|gb|EGC74829.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330406880|gb|EGG86385.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 438

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 21/128 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C  +C +C    M G  +      ++    ++ +       EV+ TG  
Sbjct: 148 HTRAYIKVQDGCNQFCTYCIIPYMRGRVRSRR--KEEVVEEVSALAAN-GYKEVVLTGI- 203

Query: 154 PLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
              LS         + L  +++ +  I+ ++ +R  S    ++P+ I  E    L    K
Sbjct: 204 --HLSSYGVDFEEKETLLSLIQAVHAIEGIERIRLGS----LEPRIITEEFASALSALPK 257

Query: 206 PVYIAIHA 213
              I  H 
Sbjct: 258 ---ICPHF 262


>gi|228940652|ref|ZP_04103217.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228973571|ref|ZP_04134154.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228980129|ref|ZP_04140444.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           Bt407]
 gi|228779611|gb|EEM27863.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           Bt407]
 gi|228786158|gb|EEM34154.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228819031|gb|EEM65091.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar berliner ATCC 10792]
          Length = 340

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 20  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNEKILSFDEIERITR-IFVSLGVRKLRITGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L K+++ L  I  V+ +
Sbjct: 79  PLL--RRGLPKLIERLNKIDGVEDI 101


>gi|148381600|ref|YP_001256140.1| putative bacteriocin biosynthesis protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|148291084|emb|CAL81548.1| putative bacteriocin biosynthesis protein [Clostridium botulinum A
           str. ATCC 3502]
          Length = 430

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 7/77 (9%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           YP  +  ++   CP+ CR C+    +  +  ++LS  + +  L  I + + I +V  TGG
Sbjct: 108 YPHALCWEITDYCPLNCRHCY----LPEKNNSILSRDNIDNVLE-IIDSAGIQQVQVTGG 162

Query: 153 DPLILSHKRLQKVLKTL 169
           + L      L+ ++ +L
Sbjct: 163 EALTHP--ELEYIIDSL 177


>gi|327311467|ref|YP_004338364.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus
           uzoniensis 768-20]
 gi|326947946|gb|AEA13052.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus
           uzoniensis 768-20]
          Length = 341

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 42/228 (18%), Positives = 86/228 (37%), Gaps = 34/228 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + +  VC   C FC      G     G +L++ D    +  + +   + +   TGG+PL+
Sbjct: 42  VAVNDVCNFSCIFC---HFEGQLRGVGRLLNADDYGFLVDVLSK-VGVRDYKLTGGEPLL 97

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
            S   +  +++ +     V+I          +  R+            + V +++H   P
Sbjct: 98  RSD--IVDIVRKMNR-DGVEI------SMTTNGFRLAELAEDLAAAGLRRVNVSVHTTDP 148

Query: 217 ----------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
                      E+    +  +     AG+ +   +VLLKGINDD E L +L++    +  
Sbjct: 149 EKFSKVAGVPKEWFRRVLDGVHAAVKAGMKVKLNAVLLKGINDDRESLRSLVKLAASIGA 208

Query: 267 KPYYLHHPDLAAGTSHF---RLTIEEGQKIVASLKEKISGLCQPFYIL 311
               +    +  G+  F   R + +E  +++  +        +P Y  
Sbjct: 209 SIQLIELMPVGLGSRVFGDLRASADEVAELLEGMG------ARPAYTR 250


>gi|300087511|ref|YP_003758033.1| radical SAM domain-containing protein [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527244|gb|ADJ25712.1| Radical SAM domain protein [Dehalogenimonas lykanthroporepellens
           BL-DC-9]
          Length = 326

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 17/152 (11%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           D + L +   C   CR C    +VGS + G  +      A L  ++ +  I  V  TGG 
Sbjct: 31  DTLWLNITTRCNQSCRHC---HVVGSREAGDQMGHGILSACLELLRREPGITTVDITGGA 87

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILR-----------FHSRVPIVDPQRINPELIQCLKE 202
           P +  +   + ++  L  +    ++R              R     P       ++ L  
Sbjct: 88  PEL--NPLFESLVSALSEMGKRIVVRHNLTVTLDGDSVGGRSLAHLPGFFAAHRVEILAS 145

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
                     A        ++I ++ RL +AG
Sbjct: 146 LPSCQPTVTDAIRGRRVFAKSIESLKRLRDAG 177


>gi|326941284|gb|AEA17180.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 338

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNEKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L K+++ L  I  V+ +
Sbjct: 77  PLL--RRGLPKLIERLNKIDGVEDI 99


>gi|71907086|ref|YP_284673.1| nitrogenase cofactor biosynthesis protein NifB [Dechloromonas
           aromatica RCB]
 gi|71846707|gb|AAZ46203.1| Nitrogenase cofactor biosynthesis protein NifB [Dechloromonas
           aromatica RCB]
          Length = 500

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 65/193 (33%), Gaps = 42/193 (21%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H Y  R+ + +   C + C +C R+         G     +   +  +  LA   E  Q
Sbjct: 51  AHHYFARMHVAVAPACNIQCNYCNRKYDCSNESRPGVVSELLTPDQAIKKVLAVAAEIPQ 110

Query: 144 IWEVIFTG-GDPLILSHK------------------------RLQKVLKTLRY--IKHVQ 176
           +  +   G GDPL    +                         L + +  +    I HV 
Sbjct: 111 MTVLGIAGPGDPLANPGRTFETFEQLSARAPDIKLCVSTNGLNLPQYVDRIAQHNIDHV- 169

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236
            +  +     VDP+ +  ++   +    K +             E+    +  L + GI+
Sbjct: 170 TITIN----CVDPE-VGAKIYPWIYWENKRI---TGVEGARILIEQQQKGLQMLTDRGIL 221

Query: 237 LLSQSVLLKGIND 249
           +   SVL+ G+ND
Sbjct: 222 VKVNSVLIPGVND 234


>gi|322379439|ref|ZP_08053809.1| Radical SAM [Helicobacter suis HS1]
 gi|322380950|ref|ZP_08055016.1| MiaB-like rRNA/tRNA modification protein [Helicobacter suis HS5]
 gi|321146622|gb|EFX41456.1| MiaB-like rRNA/tRNA modification protein [Helicobacter suis HS5]
 gi|321148148|gb|EFX42678.1| Radical SAM [Helicobacter suis HS1]
          Length = 419

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 67/161 (41%), Gaps = 15/161 (9%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKG-IVHRY--PDRILLKLLHVCPVYCRFCFRREMVG 119
            KEE+N L +E++    ++    L   ++  +    R  +K+   C   C +C       
Sbjct: 99  HKEEINALLQEKQGFFHEDKQECLDQILLSNFVGKTRAFVKIQEGCDFRCSYCIIP--TV 156

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIKHVQ 176
             +   L+       +  + + + + EV+ TG +       R   L  ++  +  +  ++
Sbjct: 157 RGQSRSLNQDHVLKQIEMLSQ-AGVLEVVLTGTNVGSYGLDRGTNLAHLILKIADLTPIK 215

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANH 215
            +R  S    ++P +IN E ++ L      + ++IA+  +H
Sbjct: 216 RVRIGS----LEPSQINTEFLELLDHPILERHLHIALQHSH 252


>gi|326791229|ref|YP_004309050.1| RNA modification enzyme, MiaB family [Clostridium lentocellum DSM
           5427]
 gi|326541993|gb|ADZ83852.1| RNA modification enzyme, MiaB family [Clostridium lentocellum DSM
           5427]
          Length = 435

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 15/118 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTG 151
             R+ +K+   C  YC +C     +       + S+  E  +  + +   +   E+I TG
Sbjct: 144 RTRVYVKVQEGCNNYCSYC-----IIPYTRGKIRSRKEEQVVEEVTKLVGLGFKEIILTG 198

Query: 152 GDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
              L     L +  L ++LK +  I+ V+ +R  S  P+     I  E I  LKE  K
Sbjct: 199 IHVLAYGKDLGNTDLIQLLKRVHEIEGVERIRMSSIEPVA----ITDEFIYALKEMPK 252


>gi|118443956|ref|YP_878198.1| tRNA modifying protein [Clostridium novyi NT]
 gi|238065369|sp|A0Q0P6|RIMO_CLONN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|118134412|gb|ABK61456.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium novyi
           NT]
          Length = 444

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 16/116 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154
             +++   C   C +C     +  +      S+  E+ +   +      + E+I  G D 
Sbjct: 147 AYIRISEGCNNLCTYC-----IIPKIRGKYRSRSIESIINEAKELANMGVKELILVGQDT 201

Query: 155 LIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            I         RL ++L+ L  I+ ++ +R         P+ I  ELI+ +K   K
Sbjct: 202 AIYGSDLYKENRLSQLLRELSNIEDIEWIRI----LYTYPEEITDELIEEIKNNDK 253


>gi|324327466|gb|ADY22726.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 338

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L + ++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQFIERLNKIDGVEDI 99


>gi|331002254|ref|ZP_08325773.1| hypothetical protein HMPREF0491_00635 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411348|gb|EGG90764.1| hypothetical protein HMPREF0491_00635 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 456

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 38/168 (22%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       V  T      +
Sbjct: 80  LMSDYKSCTNNCVFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 129

Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
               ++++++  L  I     +  H+     +P+         L++        +H    
Sbjct: 130 KDADIERIIRFNLAPI----NISVHT----TNPE---------LRKK------MLH---- 162

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
             F+ E++  I +L    + +  Q V+  G ND  E+   L       
Sbjct: 163 NRFAGESLRYIDKLYEKNVPMNGQVVMCPGYNDGEELRKTLNDLLKYA 210


>gi|323358951|ref|YP_004225347.1| molybdenum cofactor biosynthesis enzyme [Microbacterium testaceum
           StLB037]
 gi|323275322|dbj|BAJ75467.1| molybdenum cofactor biosynthesis enzyme [Microbacterium testaceum
           StLB037]
          Length = 406

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 19/163 (11%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + ++  C + C +C   + M    +  ++S+ +    +          E+  TGG+PL+ 
Sbjct: 83  VSVIDKCNLRCTYCMPADGMPWLPQAQLMSADEIRRIVRVAVHSLGAEELRITGGEPLVR 142

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
               L+ ++  +R       +   +               Q LK+AG   V +++   HP
Sbjct: 143 KD--LEHIIAGIRADNPDLPISLTTNAVG------LDRRAQALKDAGLNRVNVSLDTLHP 194

Query: 217 ---YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
               E +     ++ +A +     AG+  +   +VLL+GIND 
Sbjct: 195 ETFAELTRRPHLDKVLAGLQAARAAGLGPIKINAVLLRGINDT 237


>gi|22298906|ref|NP_682153.1| molybdenum cofactor biosynthesis protein A [Thermosynechococcus
           elongatus BP-1]
 gi|22295087|dbj|BAC08915.1| molybdenum cofactor biosynthesis protein A [Thermosynechococcus
           elongatus BP-1]
          Length = 332

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 13/173 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C + C +C   +       T L+  +    +A + E   I  V  TGG+PL+  
Sbjct: 36  LSITDRCNLRCMYCMPVDAAFMPPQTYLTPTEYATIVAELVE-LGIESVRLTGGEPLL-- 92

Query: 159 HKRLQKVLKTL--RYIKHVQILRFHSRVPIVDP--QRINPELIQC-LKEAGKPVYIAIHA 213
                +++  L    +  + +     R+    P         +   L       + AI  
Sbjct: 93  RAEFAEIVAALVAAGVPQLSLTTNGIRLVPFLPLLAHYGVRRLNISLDSLDPQTFAAISH 152

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
            H  E      AAI+   + G  +    V++ G+ND    L +++     L I
Sbjct: 153 GHHLE---TVKAAIATAVDQGFQVKLNMVVMAGVND--HELVSMVEYAKGLGI 200


>gi|329929025|ref|ZP_08282827.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5]
 gi|328937014|gb|EGG33443.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5]
          Length = 334

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 71/175 (40%), Gaps = 25/175 (14%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E M       ++S ++  A +  +     + +
Sbjct: 10  GRVHDY---IRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAIMRVLAPM-GVSK 65

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           V  TGG+PL+     L+ ++  +  I+ VQ +   +         + P   + LKEAG  
Sbjct: 66  VRLTGGEPLVRKD--LETLVHKIASIEGVQDISLTTNGI------MLPSKARLLKEAGLT 117

Query: 207 VYIAIHANHPYE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
             I I  +   E      +      + +  I     AG+  +    VL+KG N+D
Sbjct: 118 -RINISLDSLQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNED 171


>gi|319443027|ref|ZP_07992183.1| molybdenum cofactor biosynthesis protein A [Corynebacterium
           variabile DSM 44702]
          Length = 371

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 71/195 (36%), Gaps = 35/195 (17%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L+  C + C +C   E M   QK  +L++++             + +V FTGG+PL+ 
Sbjct: 45  ISLIDKCNLRCTYCMPAEGMAWLQKDRLLTAEEAVRIADLGVRIFGVRDVRFTGGEPLVR 104

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPI-------VDPQRINPELIQCLKEAGKPVYIA 210
               L  ++  +R        R H  +PI          +RI+  +   L      V + 
Sbjct: 105 HD--LADIIAGVR--------RLHPEIPISITTNGIGLDKRIDDLVDAGL--TRVNVSLD 152

Query: 211 IHANHP-YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE 263
                   E +      + I  +     AG+  +   +VL++GIND     A+L+   V 
Sbjct: 153 TVDREAFKELTRRDRLPQVIKGLEAAKAAGLEPVKVNAVLMRGINDTGA--ADLLEWCVT 210

Query: 264 LRIKPYYLHHPDLAA 278
                   +      
Sbjct: 211 RG------YQLRFIE 219


>gi|291563947|emb|CBL42763.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium
           SS3/4]
          Length = 441

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 22/129 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152
             R  +K+   C  +C +C      G  +      +D E  +  I  +    E++ TG  
Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRRP--EDVEEEVK-ILAEEGYKEIVLTGIH 198

Query: 153 ------DPLILSHKRLQKV--LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                 D      + +  +  ++ L  I  ++ +RF S    ++P+ I  E    L    
Sbjct: 199 LTSYGID---FKDEGIDFLTLIRRLHEIDGIERIRFGS----LEPRVITEEFASELSRLP 251

Query: 205 KPVYIAIHA 213
           K   I  H 
Sbjct: 252 K---ICPHF 257


>gi|253997401|ref|YP_003049465.1| molybdenum cofactor biosynthesis protein A [Methylotenera mobilis
           JLW8]
 gi|253984080|gb|ACT48938.1| molybdenum cofactor biosynthesis protein A [Methylotenera mobilis
           JLW8]
          Length = 341

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 32/190 (16%)

Query: 83  HSPLKGIVHRYPDRIL-----------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
              +      YPD+++           L +   C   C +C   EM    +  VLS ++ 
Sbjct: 2   TEKVPTPTSNYPDKLIDQFGRQVDYIRLSITDRCDFRCTYCMAEEMTFLPRDEVLSLEEC 61

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS------RVP 185
              +    +   + +V  TGG+PL+  +     + + +  ++ ++ L   +      +  
Sbjct: 62  LRLVKAFVQ-LGVTKVRITGGEPLVRKNAL--WLFEEVGKLERLKELVLTTNGSQLEKQA 118

Query: 186 IVDPQ----RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQ 240
               Q    RIN  L     E  K +          E  +  +  I     AG   +   
Sbjct: 119 ASLKQAGVKRINISLDSLNSERFKKI------TRTGELDK-VLHGIQAAKQAGFDNIKLN 171

Query: 241 SVLLKGINDD 250
           +VL++G NDD
Sbjct: 172 TVLMRGTNDD 181


>gi|242373881|ref|ZP_04819455.1| 2-methylthioadenine synthase [Staphylococcus epidermidis M23864:W1]
 gi|242348435|gb|EES40037.1| 2-methylthioadenine synthase [Staphylococcus epidermidis M23864:W1]
          Length = 451

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQASQLV--NSGYKEIVLTGIH 201

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  I  ++ +R  S    ++  ++  E+I+ +  + K 
Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLDEIDGLERIRISS----IEASQLTDEVIEVIGNSNK- 253

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 254 VVRHLHV 260


>gi|134300005|ref|YP_001113501.1| radical SAM domain-containing protein [Desulfotomaculum reducens
           MI-1]
 gi|134052705|gb|ABO50676.1| Radical SAM domain protein [Desulfotomaculum reducens MI-1]
          Length = 330

 Score = 46.6 bits (110), Expect = 0.006,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 16/106 (15%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
             + C +YC  C+R   V +++   LS+ + +  L  I E      +IF+GG+PL+    
Sbjct: 7   TTNACNLYCEHCYRDAGVKAEEE--LSTDEGKRLLDQIAE-VGFKIMIFSGGEPLMRPD- 62

Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
                +  L      + LR  F +   +     I PE+ + LKE+G
Sbjct: 63  -----IYELVAHARSKGLRPVFGTNGTL-----ITPEVAKRLKESG 98


>gi|315637089|ref|ZP_07892312.1| 2-methylthioadenine synthetase [Arcobacter butzleri JV22]
 gi|315478625|gb|EFU69335.1| 2-methylthioadenine synthetase [Arcobacter butzleri JV22]
          Length = 422

 Score = 46.3 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 10/125 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C    + G       S       +  +       E I TG +
Sbjct: 139 KSRAFIKIQEGCDFRCSYCIIPYVRGD--ARSYSEDKILEQVTTLAAN-GFGEFILTGTN 195

Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                 K+   L K+LK +  IK V+ +R  S    ++P +I+ E  + + E     ++ 
Sbjct: 196 VGSYGKKQHTSLAKLLKKMSLIKGVRRIRMGS----IEPIQIDDEFKEIINEPFMAKHLH 251

Query: 211 IHANH 215
           I   H
Sbjct: 252 IALQH 256


>gi|254250659|ref|ZP_04943978.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia cenocepacia
           PC184]
 gi|124879793|gb|EAY67149.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia cenocepacia
           PC184]
          Length = 393

 Score = 46.3 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 83/233 (35%), Gaps = 58/233 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
           L ++  C   C +C  RE  G+    + SS+    A L  I        + ++  TGG+P
Sbjct: 65  LSVIDQCNFRCGYCMPRESFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEP 124

Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
           L+   + L+ +++ L  +  V                    + LR    SRV +     +
Sbjct: 125 LL--RRNLEALIERLATLTTVDGKPVEIALTTNGSLLAAKARALRDAGLSRVTVSL-DAL 181

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
           +  L + + +A  PV   +             A I     AG   +   +V+ +G+NDD 
Sbjct: 182 DDALFRRMSDADVPVARVL-------------AGIEAAHAAGLAPVKVNAVIERGMNDD- 227

Query: 252 EILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296
             +  L+R F    +      Y         G S +     +     ++++  
Sbjct: 228 -QILPLVRHFRHTGVAVRFIEY-----MDVGGASFWSGDKVVPAARMRELIDE 274


>gi|310827222|ref|YP_003959579.1| hypothetical protein ELI_1630 [Eubacterium limosum KIST612]
 gi|308738956|gb|ADO36616.1| hypothetical protein ELI_1630 [Eubacterium limosum KIST612]
          Length = 436

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 56/174 (32%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           +     C   C FCF  +M    + T+           Y+++  +    +   G+ + L+
Sbjct: 85  MLETRTCKNNCVFCFIDQMPPGMRETL-----------YVKDDDERLSFLL--GNYVTLT 131

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216
           +         L   +  +I+R           RI             P+ I++H  +P  
Sbjct: 132 N---------LTEAEMERIVR----------YRIM------------PINISVHTTNPEL 160

Query: 217 ------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
                   F+   + ++   A+ GI +  Q VL  G ND       L RT  +L
Sbjct: 161 RCAMLHNRFAGSIVESLRYFADNGIGMNGQIVLCPGYNDR----DELRRTLNDL 210


>gi|315924411|ref|ZP_07920633.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter
           alactolyticus ATCC 23263]
 gi|315622290|gb|EFV02249.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter
           alactolyticus ATCC 23263]
          Length = 432

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 30/193 (15%), Positives = 62/193 (32%), Gaps = 30/193 (15%)

Query: 17  ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED 76
              +  E+I +I+E+           I    + +   D +AR      +E +       D
Sbjct: 80  YAQVAPEEISKIEEVDL---------ILGTAHRNRVVDEVAR-----FQEDHHRQVYVSD 125

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
               +    +    HR   R  LK+   C  +C +C     +       + S+  ++   
Sbjct: 126 ISEQHIFEDMPIAEHRRHTRAFLKVQDGCNQFCTYC-----IVPYARGRIRSRRIDSVCE 180

Query: 137 YIQ--EKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDP 189
            +Q        E + +G               L  +++ +  I  V  +R  S    ++P
Sbjct: 181 EVQLLASDGFKEFVLSGIHIASYGKDMPGGPDLLTLIRAVDAIPGVARIRLGS----IEP 236

Query: 190 QRINPELIQCLKE 202
             +    +  L E
Sbjct: 237 LLMTETFVAGLSE 249


>gi|314935815|ref|ZP_07843167.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis
           subsp. hominis C80]
 gi|313656380|gb|EFS20120.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis
           subsp. hominis C80]
          Length = 340

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 44/177 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G       K  +L+  +    +A +  +  + ++  TGG+
Sbjct: 18  ISVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFDEITT-IAKVYAELGVKKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+     L K+++ L  I+ ++ +   +                 LK+ G+ +Y     
Sbjct: 77  PLLRRD--LYKLIEKLNRIEGIEDIGLTTNGL-------------LLKKHGQKLYDAGLR 121

Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
            I +  +      +E   AI+        +L Q               V+ KGINDD
Sbjct: 122 RINVSLDA---IDDEVFQAINNRNIKASTILQQIDYAVSIGFHVKVNVVIQKGINDD 175


>gi|312135001|ref|YP_004002339.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           owensensis OL]
 gi|311775052|gb|ADQ04539.1| Radical SAM domain protein [Caldicellulosiruptor owensensis OL]
          Length = 341

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 11/114 (9%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +    + CP  C FC ++ + G ++   L    +  E  L  I     + E+ + GG+  
Sbjct: 8   IFIPQYACPFNCIFCNQKTISGEKEEVSLDRIKRQIEQGLK-INSDEDV-ELAYYGGN-F 64

Query: 156 ILSHKRL-QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                   +++L+     + ++ +R  +R     P  I+ E ++ LK       
Sbjct: 65  TAIDMTFQERLLELANSFERIKSIRISTR-----PDCIDDERLRLLKLYNVRTI 113


>gi|323701819|ref|ZP_08113489.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
 gi|323533123|gb|EGB22992.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
          Length = 330

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 39/212 (18%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C +YC  C+R   V +++   L++++ +  +  I E +    +IF+GG+PL+
Sbjct: 3   VSWNTTNACNLYCAHCYRDAGVKAEEE--LNTEEGKRLIDQIAE-AGFKIMIFSGGEPLM 59

Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKE-----AGKPVYI 209
                    +  L      + LR  F +   +     I PE+ + LK+      G  +  
Sbjct: 60  RPD------IFELVAYAKSKGLRPVFGTNGTL-----ITPEVAKRLKDCGAAGMGISLDS 108

Query: 210 AIHANH----PYE-FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
                H      E   + A+  +     AG+     + ++    D+ E L +L    V  
Sbjct: 109 VDPVKHDKFRAQEGCWQAAVEGMRNCRQAGLPFQIHTTVVDWNYDEVEALTDLA---VRE 165

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
               +++           F +       I   
Sbjct: 166 GAVAHHVF----------FLVPTGRAVNIEQE 187


>gi|78044693|ref|YP_359280.1| MiaB-like tRNA modifying enzyme [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77996808|gb|ABB15707.1| MiaB-like tRNA modifying enzyme [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 434

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 26/122 (21%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-- 151
           R  +K+   C  YC +C     +       L S+  E  +A +++  +S   E++ TG  
Sbjct: 144 RAFVKIQEGCNSYCAYC-----IIPYARGPLRSRPLEDVVAEVKKLCQSGFSEIVLTGIH 198

Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                    D       +L  ++  L  I  ++ LR  S    ++PQ    EL+  L  +
Sbjct: 199 TGAYGQEKQD-----LPKLADLVAELFKIPELKRLRLSS----IEPQDFTVELLDVLANS 249

Query: 204 GK 205
            K
Sbjct: 250 PK 251


>gi|296273084|ref|YP_003655715.1| MiaB-like tRNA modifying protein [Arcobacter nitrofigilis DSM 7299]
 gi|296097258|gb|ADG93208.1| MiaB-like tRNA modifying enzyme [Arcobacter nitrofigilis DSM 7299]
          Length = 421

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 10/125 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C    + G       S       +  +       E I TG +
Sbjct: 139 KSRAFIKIQEGCDFRCSYCIIPYVRGD--ARSYSEDKILEQITTLASN-GFGEFILTGTN 195

Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                 K+   L K+LK +  IK V+ +R  S    ++P +I+ E  + + E     ++ 
Sbjct: 196 VGSYGKKKHTSLAKLLKKISLIKGVRRIRMGS----IEPIQIDDEFKEIIDEPFMARHLH 251

Query: 211 IHANH 215
           I   H
Sbjct: 252 IALQH 256


>gi|328952311|ref|YP_004369645.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
 gi|328452635|gb|AEB08464.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
          Length = 291

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 67/188 (35%), Gaps = 32/188 (17%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAY----IQEKSQ 143
              Y  R+ L +   C + C +C R+    ++    ++S+    + A+ +    ++    
Sbjct: 19  ARHYFGRLHLPVAAGCNIQCGYCDRKYDCPNESRPGVTSQLLTPQEAIDHVEFILKNHPT 78

Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           I  V   G GD        L+ VL  +R      IL   +      P  +  + +  L+ 
Sbjct: 79  ISVVGIAGPGDAFHNPAVTLE-VLARIRAAHPDIILCVSTNGLN-LPDYV--DYLSRLRV 134

Query: 203 AGKPVYIAI-----------HANHPYEF--SEEAI--------AAISRLANAGIILLSQS 241
               V I             + +H        EA+         AIS L   G+ +   +
Sbjct: 135 NFVTVTINTLTPAIGTRIYDYISHHGRIVQGPEAVTILTRLQLQAISLLKRKGLRVKVNT 194

Query: 242 VLLKGIND 249
           V++ GIND
Sbjct: 195 VIIPGIND 202


>gi|256752725|ref|ZP_05493574.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|256748400|gb|EEU61455.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
           ethanolicus CCSD1]
          Length = 317

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 20/163 (12%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E +       +L +++    +  I  +  I +V FTGG+PL+ 
Sbjct: 14  VSVTDRCNLRCIYCMPEEGIPKKDHNEILRNEEILKIIR-ISAELGIKKVRFTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
             K ++ ++     IK ++ +   +         +  E+   LKEAG K V I++ +   
Sbjct: 72  -RKGIENIIYETSKIKGIEDIALTTNG------TMLYEMADTLKEAGLKRVNISLDSLKK 124

Query: 214 NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
           +     +     ++   AI +  + G+  +   +V++KGINDD
Sbjct: 125 DRYRMITRLGNIDDVFRAIDKSLSIGLEPVKINTVVIKGINDD 167


>gi|224436696|ref|ZP_03657700.1| hypothetical protein HcinC1_02049 [Helicobacter cinaedi CCUG 18818]
 gi|313143194|ref|ZP_07805387.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313128225|gb|EFR45842.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 427

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 14/123 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C   C +C     V  +  +    K  +  L     +S I EV+ TG +
Sbjct: 135 KSRAFLKIQEGCDFACSYCII-PSVRGKARSYPKDKILKQILT--LAESGISEVVLTGTN 191

Query: 154 PLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK----EAGKP 206
                      L  +++ +  +  ++ LR  S    ++P +I+ E  + L+    E    
Sbjct: 192 VGSYGRDLDSNLAGLIREIYNLGVLRRLRIGS----LEPSQIDSEFKEVLELPIMEKHLH 247

Query: 207 VYI 209
           + +
Sbjct: 248 IAL 250


>gi|253582853|ref|ZP_04860072.1| molybdenum cofactor biosynthesis protein A [Fusobacterium varium
           ATCC 27725]
 gi|251835287|gb|EES63829.1| molybdenum cofactor biosynthesis protein A [Fusobacterium varium
           ATCC 27725]
          Length = 325

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 22/164 (13%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C++C   R M    K  +L+ ++ +  +  I  K  I ++  TGG+PL+ 
Sbjct: 14  LSVTDRCNLRCQYCMSERNMNFLPKEELLTVEEIKRIVT-IFSKIGIKKIRLTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
             K   ++L+ L  IK+++ +   +         +  E    L + G K + I++   +P
Sbjct: 72  -RKNFTEILENLHSIKNIEEISMTTNGL------LLEENFDSLVKNGVKKINISLDTLNP 124

Query: 217 ---YEFS-----EEAIAAISRLANAGI--ILLSQSVLLKGINDD 250
               E +      + I  I +  + G+  I L+  VL+KG ND+
Sbjct: 125 VLYSEITRGGSFNQVIKNIFKALDIGMERIKLN-IVLIKGKNDN 167


>gi|291542169|emb|CBL15279.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus
           bromii L2-63]
          Length = 446

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 58/170 (34%), Gaps = 16/170 (9%)

Query: 67  LNILPEEREDPIGDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFC----FRREMVGS 120
           L  L  ++ +   D    PL+G  I+   P    LK+   C   C +C     R      
Sbjct: 115 LETLDGQKCESFPDKVCLPLEGGRILSTPPYTAYLKIAEGCDNRCSYCAIPMIRGRFRSR 174

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
               V+   +  A     +      +    G D        L ++L+ L  I   + +R 
Sbjct: 175 DIEDVVKEAEGLAERGVKELNVIAQDTTRFGEDKY--GKPMLAELLRRLCRIDGFKWIR- 231

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISR 229
              V    P RI  ELI  +    K V Y+ I   H      + +  ++R
Sbjct: 232 ---VLYCYPDRITDELIDTIAGEDKIVKYMDIPLQH---CDGDVLRRMNR 275


>gi|330686411|gb|EGG98011.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           epidermidis VCU121]
          Length = 341

 Score = 46.3 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 44/177 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAA--LAYIQEKSQIWEVIFTGGD 153
           L +   C   C +C  +E+ G      L  ++    E    ++ +  +  + ++  TGG+
Sbjct: 19  LSVTDRCNFRCDYCMPKEIFGDDF-VFLPKEELLTFEEMVRISKLYAQLGVKKIRITGGE 77

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+   + L ++++ L  I+ ++ +   +                 LK+ G+ +Y     
Sbjct: 78  PLL--RRNLYQLIEQLNQIEGIEDIGLTTNGL-------------LLKKHGQNLYNAGLR 122

Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
            I I  +     ++E   AI+        +L Q               V+ KGINDD
Sbjct: 123 RINISLDA---INDEVFQAINNRNIKASTILEQIDYAISIGFEIKVNVVIQKGINDD 176


>gi|206975055|ref|ZP_03235969.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           H3081.97]
 gi|229138875|ref|ZP_04267455.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-ST26]
 gi|206746476|gb|EDZ57869.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           H3081.97]
 gi|228644606|gb|EEL00858.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-ST26]
          Length = 337

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G+      +  +LS  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGADYAFLQEEFLLSFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L +++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LSQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128

Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
               H     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175


>gi|217959681|ref|YP_002338233.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
 gi|217066262|gb|ACJ80512.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
          Length = 337

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G+      +  +LS  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGADYAFLQEEFLLSFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L +++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LSQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128

Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
               H     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEGHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175


>gi|85857996|ref|YP_460198.1| molybdenum cofactor biosynthesis protein A [Syntrophus
           aciditrophicus SB]
 gi|85721087|gb|ABC76030.1| molybdenum cofactor biosynthesis protein A [Syntrophus
           aciditrophicus SB]
          Length = 329

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 22/164 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + CR+C   E +       +LS +D   ++  +     I ++  TGG+PL+ 
Sbjct: 17  ISVTDRCNLRCRYCMPEEGISKLDHREILSLEDIVRSVK-VAAGVGIRKIRLTGGEPLVR 75

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGKPV 207
               + +++  +  +  +  +   +   +              R+N  +   + E  + +
Sbjct: 76  KD--IARLIGFISEVPEIDDIAMTTNGVLFADMAEQLKAAGLDRVNFSMDTMVSEKFRYI 133

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
               H         +   AI +    G+  +   +V+++G NDD
Sbjct: 134 SRRDHL-------ADVRKAIFKALELGLEPVKINTVVIRGFNDD 170


>gi|289523492|ref|ZP_06440346.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503184|gb|EFD24348.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 463

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 21/154 (13%)

Query: 53  NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           NDPI R   P   + ++L  ++ D +     S +      +  R  +K+   C  +C +C
Sbjct: 120 NDPIER---PLFLKKDVLSNDKWDAL---ELSRVT-----FHTRSFVKVQDGCNRFCSYC 168

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTL 169
               + G  + T  S K+    +  + +     EV+ TG   G         L  ++  L
Sbjct: 169 IVPFLRG--RPTSRSVKEVAEEVKRLVDH-GCKEVVLTGIHLGLYGYGCDFDLGDLINAL 225

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
             I+ ++ LRF S    ++P  ++  LI  L E+
Sbjct: 226 SRIEGLRRLRFGS----IEPHALSDRLIDVLAES 255


>gi|328911014|gb|AEB62610.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus amyloliquefaciens LL3]
          Length = 522

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 45/233 (19%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
           I D   + +  +     +  +   +  CP  C +C         +   + S         
Sbjct: 176 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 235

Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
           +    ++++   ++  + F GG P  ++ + +  + + + R   +V+ +R  + V    P
Sbjct: 236 QKIGEWLKQHDIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPNVENIREIT-VEAGRP 294

Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
             I  E +  L +     + I      P  +  E + AI R           +V      
Sbjct: 295 DTITEEKLAVLNKYKIDRISIN-----PQSYENETLKAIGR---------HHTV------ 334

Query: 249 DDPEILAN--LMRTFVELRIKPYYLHHPDLA-----AGTSHFRLTIEEGQKIV 294
              E +    L R      I      + DL       GT+ FR +++E +K++
Sbjct: 335 --EETIEKYHLSRKHGMNNI------NMDLIIGLPGEGTAEFRHSLDETEKLM 379


>gi|218903282|ref|YP_002451116.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
 gi|218538331|gb|ACK90729.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
          Length = 337

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 36/173 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALA-YIQEKSQIWEVIFTGG 152
           + ++  C   C +C   E+ G       +  +L+  + E     +I+    + ++  TGG
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFIRM--GVNKIRLTGG 75

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211
           +PL+     L  ++  L  +  ++ +   +    +  Q       + LKEAG K V I++
Sbjct: 76  EPLLRKD--LPHLIARLAKLDGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISL 127

Query: 212 --------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                         H +     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 128 DAIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175


>gi|150390422|ref|YP_001320471.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus metalliredigens
           QYMF]
 gi|238065283|sp|A6TRJ4|RIMO_ALKMQ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|149950284|gb|ABR48812.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus metalliredigens
           QYMF]
          Length = 446

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--- 153
             +K+   C  YC +C   ++ G  +   +  ++       +     + E+I    D   
Sbjct: 147 AYIKISDGCDNYCTYCIIPKLRGKYRSRKM--ENIIQEAQTLANN-GVKEIILIAQDTTR 203

Query: 154 -PLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
             + L  + RL  +L  L  ++ +Q +R         P+ I  ELI  +K   K
Sbjct: 204 YGIDLYDEYRLSALLDKLSEVEGIQWIRI----LYCYPEMITDELIATIKNNDK 253


>gi|154503579|ref|ZP_02040639.1| hypothetical protein RUMGNA_01403 [Ruminococcus gnavus ATCC 29149]
 gi|260589912|ref|ZP_05855825.1| putative elongator protein 3/MiaB/NifB [Blautia hansenii DSM 20583]
 gi|153795679|gb|EDN78099.1| hypothetical protein RUMGNA_01403 [Ruminococcus gnavus ATCC 29149]
 gi|260539719|gb|EEX20288.1| putative elongator protein 3/MiaB/NifB [Blautia hansenii DSM 20583]
          Length = 426

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 65/173 (37%), Gaps = 19/173 (10%)

Query: 72  EEREDPIGDNNHSPLKGIV--HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
           +E+  P+       +K I   H   + + L +   C + C FC        +       +
Sbjct: 51  QEKLFPVWKQQTEFIKEIENNHEKINTVYLMVTRKCNMNCDFCAISANDKLRPEKEFKLE 110

Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPI 186
           D +  +    +K++  ++I TGG+PLI    ++ ++ K LR          +   S    
Sbjct: 111 DIQNKVIPFFQKNKPHKMILTGGEPLI--KDQIVEIAKALRNGLTCP----ITLQSNGLA 164

Query: 187 VDPQRINPELIQCLKEAGKPVYIAI-H-ANHPYEFSEEAIAAISRLANAGIIL 237
                I  EL + LK     +  +  H    P E  ++ I  I     AGI +
Sbjct: 165 -----ITRELTEQLKGYIDEIDFSTMHMFGTP-EKEQQLINHIEMCQQAGIKV 211


>gi|330835443|ref|YP_004410171.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4]
 gi|329567582|gb|AEB95687.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4]
          Length = 352

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 49/287 (17%), Positives = 103/287 (35%), Gaps = 55/287 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++L+    C + CR C    +     G  L++++ ++ +  +   S +   + +GGD
Sbjct: 4   PYVVVLESTKACDLACRHCRANALPNRLPGE-LTTEEVKSLVEDLSS-SGVKLFVVSGGD 61

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD--P--QRINPELIQCLKEAGKPVYI 209
            L     +   + +         ILR+ SR       P   RIN ++ + +KE G  + +
Sbjct: 62  AL-----KRDDIFE---------ILRYSSRRLNTALSPSGSRINLDVAKKIKETGVSI-V 106

Query: 210 AIHANHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           +I  + P E  +E          A  AI  L   G+ +   + + K    + E L +L+R
Sbjct: 107 SISVDGPEEVHDEFRGVKGAFKMAKGAIESLKEVGVPVQINTTISKY---NVEKL-DLLR 162

Query: 260 TFVELRIKPYY--LHHPDLA-AGTSHFRLTIEEGQKIVASL-KEKISGLCQ-----PFYI 310
             VE    P +  +         T    ++ ++ + ++  + + +  GL       P+ +
Sbjct: 163 EVVE-GFNPAFWDIFMLIPTGRATKEMMISPDQAEIVMKRVTEWRSDGLNVRMTCAPYLV 221

Query: 311 LDLPGGYGKVKIDTHNIKKV----------GNGSYCITDHHNIVHDY 347
             +        +    I                 Y    +   V+  
Sbjct: 222 RVMNELNVTNPLPPDRIYGRRSVNGARGCMAGNGYAFISYDGTVYPC 268


>gi|57641163|ref|YP_183641.1| molybdenum cofactor biosynthesis protein A [Thermococcus
           kodakarensis KOD1]
 gi|57159487|dbj|BAD85417.1| probable molybdenum cofactor biosynthesis protein A [Thermococcus
           kodakarensis KOD1]
          Length = 419

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 33/184 (17%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-- 145
           G++ R  + I ++ +  C + C FC   E   S+   +    D +  + +  E ++I   
Sbjct: 108 GLIDRGTNLIQVRGVSGCNLSCVFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167

Query: 146 --EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
             E    G G+PLI   +   ++++ LR   +V ++   S   +     +N +L++ L E
Sbjct: 168 GLEAHLDGQGEPLIYPFRV--ELVQALREHPNVSVISMQSNGTL-----LNDKLVEELAE 220

Query: 203 AGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLANAGIILLSQSVLLKG 246
           AG   V ++IH         +    +                 L NAGI +L   V++ G
Sbjct: 221 AGLDRVNLSIH-----SLDPDKAKMLMGRKDYDLQHVLDMAEALVNAGIDVLIAPVIIFG 275

Query: 247 INDD 250
           +ND+
Sbjct: 276 VNDN 279


>gi|294782047|ref|ZP_06747373.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 1_1_41FAA]
 gi|294480688|gb|EFG28463.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 1_1_41FAA]
          Length = 342

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 34/170 (20%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
           ++ +  +      CP  C FC ++++ G +    +S  D +  +  Y++      I EV 
Sbjct: 2   KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKEVA 59

Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG         L ++ L+ ++  I +  V+ +R  +R     P+ I+ E++  LK+ G
Sbjct: 60  FFGG-TFTGISMELQKQYLEVVKKYIDNADVEGVRISTR-----PECIDDEILTQLKKYG 113

Query: 205 -KPVYIAI-------------HANHPYEFSEEAIAAISRLANAGIILLSQ 240
            K + + I             H N  YE       +   +   G  L  Q
Sbjct: 114 VKTIELGIQSLDDEVLKATGRHYN--YEI---VKKSCDLIKKYGFTLGVQ 158


>gi|291542691|emb|CBL15801.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Ruminococcus bromii
           L2-63]
          Length = 457

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 60/129 (46%), Gaps = 13/129 (10%)

Query: 92  RYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-- 145
           +  + ++    L + H C + C +CF  +     +  ++S +  + A+ ++ E S     
Sbjct: 92  KKRNTVIKALCLHIAHTCNLNCEYCFASQGKYHGERALMSFEVGKRAIDFLIENSGSRVN 151

Query: 146 -EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            EV F GG+PL ++   +++++   R I  +H +  RF       +   ++ ++I+   +
Sbjct: 152 LEVDFFGGEPL-MNFDVVKQIVAYARSIEKEHNKNFRF---TLTTNGMLVDDDVIEFANK 207

Query: 203 AGKPVYIAI 211
               V +++
Sbjct: 208 ECHNVVLSL 216


>gi|126700065|ref|YP_001088962.1| putative radical SAM superfamily protein [Clostridium difficile
           630]
 gi|254976042|ref|ZP_05272514.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-66c26]
 gi|255093430|ref|ZP_05322908.1| putative radical SAM superfamily protein [Clostridium difficile CIP
           107932]
 gi|255101608|ref|ZP_05330585.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-63q42]
 gi|255307477|ref|ZP_05351648.1| putative radical SAM superfamily protein [Clostridium difficile
           ATCC 43255]
 gi|255315175|ref|ZP_05356758.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-76w55]
 gi|255517844|ref|ZP_05385520.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-97b34]
 gi|255650960|ref|ZP_05397862.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-37x79]
 gi|260684029|ref|YP_003215314.1| putative radical SAM superfamily protein [Clostridium difficile
           CD196]
 gi|260687689|ref|YP_003218823.1| putative radical SAM superfamily protein [Clostridium difficile
           R20291]
 gi|306520839|ref|ZP_07407186.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-32g58]
 gi|115251502|emb|CAJ69335.1| putative MiaB-like tRNA modifying enzyme [Clostridium difficile]
 gi|260210192|emb|CBA64398.1| putative radical SAM superfamily protein [Clostridium difficile
           CD196]
 gi|260213706|emb|CBE05587.1| putative radical SAM superfamily protein [Clostridium difficile
           R20291]
          Length = 432

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 17/120 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  +C +C     +       + S+D ++ +  ++    +   EV+ TG
Sbjct: 141 KTRAFMKIQDGCDRFCTYC-----IIPYARGRVRSRDIDSIVDEVKKLANNGYKEVVLTG 195

Query: 152 GDPLI----LSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                    L  +  +L  V+K +  I+ ++ +R  S    V+P     E +  + +  K
Sbjct: 196 IHVASYGKDLKDRDIKLLDVIKQINQIEKIERIRLSS----VEPILFTDEFVNEVLKMDK 251


>gi|4104517|gb|AAD02057.1| unknown [Clostridium acetobutylicum DSM 1731]
          Length = 386

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 21/128 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  LK+   C  +C +C      G      + SK+ E  +  I+  ++    E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCSYCLIPYARGG-----VCSKNPEKVIGEIKRLAEHGFKEIILSG 195

Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                 GD L      L  +++    I  ++ +R  S    ++P+  + + I  +K   K
Sbjct: 196 IHIASYGDDLKGDW-NLISIIEKAEQIDGIERIRIGS----IEPRFFDEDTISKIKNMKK 250

Query: 206 PVYIAIHA 213
              +  H 
Sbjct: 251 ---MCPHF 255


>gi|15894568|ref|NP_347917.1| Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824]
 gi|15024215|gb|AAK79257.1|AE007641_3 Fe-S oxidoreductases [Clostridium acetobutylicum ATCC 824]
 gi|325508700|gb|ADZ20336.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018]
          Length = 436

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 21/128 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  LK+   C  +C +C      G      + SK+ E  +  I+  ++    E+I +G
Sbjct: 141 KTRAFLKIQDGCNRFCSYCLIPYARGG-----VCSKNPEKVIGEIKRLAEHGFKEIILSG 195

Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                 GD L      L  +++    I  ++ +R  S    ++P+  + + I  +K   K
Sbjct: 196 IHIASYGDDLKGDW-NLISIIEKAEQIDGIERIRIGS----IEPRFFDEDTISKIKNMKK 250

Query: 206 PVYIAIHA 213
              +  H 
Sbjct: 251 ---MCPHF 255


>gi|11499786|ref|NP_071029.1| arylsulfatase regulatory protein, putative [Archaeoglobus fulgidus
           DSM 4304]
 gi|3334443|sp|O28079|Y2204_ARCFU RecName: Full=Uncharacterized protein AF_2204
 gi|2648320|gb|AAB89048.1| arylsulfatase regulatory protein, putative [Archaeoglobus fulgidus
           DSM 4304]
          Length = 412

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 15/106 (14%)

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYP-----DRILLKLLHVCPVYCRFCFRREMV 118
           +EE+     ER+D + +         + RY          +     C   C +C+    +
Sbjct: 26  REEVERFYRERKDALLEE--------MQRYRFEVDIRTAYINPTESCNRNCPYCYIPAEI 77

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
             ++GT +S +  E  L  + E   +  VIF G +PL++  +  + 
Sbjct: 78  -RERGTKMSYEKLEEILTVLAEN-GVERVIFHGAEPLMVKDEIFRA 121


>gi|294053874|ref|YP_003547532.1| molybdenum cofactor biosynthesis protein A [Coraliomargarita
           akajimensis DSM 45221]
 gi|293613207|gb|ADE53362.1| molybdenum cofactor biosynthesis protein A [Coraliomargarita
           akajimensis DSM 45221]
          Length = 335

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 71/190 (37%), Gaps = 40/190 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + L   C + C +C  +E+ G       K   L   + +A +A       + ++  TGG+
Sbjct: 15  ISLTDRCNLRCTYCMPKEVFGPDYVFLKKQEWLRFSELDAVVAAFVR-LGVRKLRLTGGE 73

Query: 154 PLILSHKRLQKV--LKTLRYIKHVQI----LRF----------HSRVPIVDPQRINPELI 197
           PL L    L+ +  L+    I+ V +    +R             +   V    ++ +L 
Sbjct: 74  PL-LRPGLLKYIEGLRRFEPIEDVALTTNGMRLAEKVGDLKAAGLKRVTVSLDALDADLC 132

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAA-ISRLANAGIILLSQSVLLKGINDDPEILAN 256
             +   G                 + + A I     AG+ +    V+ +G+ND  E+L  
Sbjct: 133 GRMNGRG--------------IGPKVVLAGIDAALKAGLGVKVNMVVERGVND-AEVL-P 176

Query: 257 LMRTFVELRI 266
           ++R F  + +
Sbjct: 177 MVRYFKSIGV 186


>gi|269215615|ref|ZP_06159469.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Slackia exigua ATCC
           700122]
 gi|269131102|gb|EEZ62177.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Slackia exigua ATCC
           700122]
          Length = 423

 Score = 46.3 bits (109), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 12/143 (8%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
            +R   + D   + + G    +P R+ +K+   C   C FC     V   +     +   
Sbjct: 135 ADRSFALSDAAAARVGGS---FPTRVPVKIQDGCDNACTFCIV--HVARGRSRSRDAAAV 189

Query: 132 EAALAYIQEKSQIWEVIFTGGDP--LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
           E  ++ +   + + E++ +G +          L  + + L        LR  S    ++P
Sbjct: 190 EREVSALGA-AGVREIVLSGINLGRYRCGDAGLATLAERLLSCAPETRLRISS----IEP 244

Query: 190 QRINPELIQCLKEAGKPVYIAIH 212
           Q ++  LI+ +  +G  V   +H
Sbjct: 245 QSVDDALIEVMATSGGRVCRHLH 267


>gi|295103959|emb|CBL01503.1| SSU ribosomal protein S12P methylthiotransferase [Faecalibacterium
           prausnitzii SL3/3]
          Length = 441

 Score = 45.9 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 65/211 (30%), Gaps = 49/211 (23%)

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL--------LKLLHVCPVYCRFC----F 113
           E     E+  +  G     PL G       R++        LK+   C   C +C     
Sbjct: 113 ERLFHGEDHLESYGAKKDFPLGG------KRVIGTPAHYAYLKIAEGCNNRCHYCAIPGI 166

Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-----SHKRLQKVLKT 168
           R  +        ++     A          + E+I    DP            + ++L  
Sbjct: 167 RGPLHSRDMADCVAEARWLAG-------EGVKELIVVAQDPTAYGEDWGKPGSICELLDK 219

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP----------Y 217
           L  +  ++ +R         P+RI  E I  +K   K V Y+ +   H            
Sbjct: 220 LNKVPGLEWIRI----MYAYPERITDEFIAAMKRNEKVVPYLDLPIQHCNDTILKNMNRR 275

Query: 218 EFSEEAIAAISRLANA--GIILLSQSVLLKG 246
               E +  I +L     GI L   + L+ G
Sbjct: 276 STRAELLEVIGKLRREIPGITLR--TTLIAG 304


>gi|291543502|emb|CBL16611.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus sp.
           18P13]
          Length = 447

 Score = 45.9 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 20/152 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150
             LK+   C   C +C    + G  +   +  +D      ++ E       +        
Sbjct: 147 AYLKIAEGCNNCCTYCAIPMIRGGFR--SVPMEDVLEEARWLTEHGVTELTVIAQDTTRY 204

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
           G D  +    RL ++L+ L  I+ ++ +R    V    P+RI  +L++ +    K V Y+
Sbjct: 205 GED--LYGESRLPELLEQLCRIQGIRWIR----VLYCYPERITDKLLEVMAREEKLVKYL 258

Query: 210 AIHANHPYEFSEEAIAAISRLANAG--IILLS 239
            I   H    + + +  ++R  +AG    LL+
Sbjct: 259 DIPIQH---CNGDILRRMNRQGDAGTLAALLN 287


>gi|160942860|ref|ZP_02090099.1| hypothetical protein FAEPRAM212_00336 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445761|gb|EDP22764.1| hypothetical protein FAEPRAM212_00336 [Faecalibacterium prausnitzii
           M21/2]
          Length = 441

 Score = 45.9 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 65/211 (30%), Gaps = 49/211 (23%)

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL--------LKLLHVCPVYCRFC----F 113
           E     E+  +  G     PL G       R++        LK+   C   C +C     
Sbjct: 113 ERLFHGEDHLESYGAKKDFPLGG------KRVIGTPAHYAYLKIAEGCNNRCHYCAIPGI 166

Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-----SHKRLQKVLKT 168
           R  +        ++     A          + E+I    DP            + ++L  
Sbjct: 167 RGPLHSRDMADCVAEARWLAG-------EGVKELIVVAQDPTAYGEDWGKPGSICELLDK 219

Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP----------Y 217
           L  +  ++ +R         P+RI  E I  +K   K V Y+ +   H            
Sbjct: 220 LNKVPGLEWIRI----MYAYPERITDEFIAAMKRNEKVVPYLDLPIQHCNDTILKNMNRR 275

Query: 218 EFSEEAIAAISRLANA--GIILLSQSVLLKG 246
               E +  I +L     GI L   + L+ G
Sbjct: 276 STRAELLEVIGKLRREIPGITLR--TTLIAG 304


>gi|222823704|ref|YP_002575278.1| MiaB-like tRNA modifying enzyme [Campylobacter lari RM2100]
 gi|222538926|gb|ACM64027.1| MiaB-like tRNA modifying enzyme [Campylobacter lari RM2100]
          Length = 418

 Score = 45.9 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 10/128 (7%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             +  +K+   C   C +C    + G  K   + S +    +  + +     EV+ TG +
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRG--KSRSIPSDEIIKQIKLLAQN-GYSEVVLTGTN 188

Query: 154 --PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                L  K  L K+L+ +  I  ++ +R  S    ++P +I+    + L E     ++ 
Sbjct: 189 IGSYGLKDKTTLGKLLQEIGKINGIKRVRLGS----LEPAQIDESFKEILDEPWLERHLH 244

Query: 211 IHANHPYE 218
           I   H +E
Sbjct: 245 IALQHTHE 252


>gi|27262458|gb|AAN87510.1| molybdenum cofactor biosynthesis protein A [Heliobacillus mobilis]
          Length = 327

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 65/175 (37%), Gaps = 21/175 (12%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   + +       VL  ++ E  +  I     I  V  TGG+PL+ 
Sbjct: 14  VSVTDRCNLRCVYCMPEQGIPLVDHEEVLRFEEFEQLIR-IAAAEGIRRVRVTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
             K +   +  ++ I  ++ +   +   +  PQ       + LK AG   V I++    P
Sbjct: 72  -RKGIVDFVARVKEIPGIEDVALTTNGIL-LPQ-----FARDLKAAGLNRVNISLDTLRP 124

Query: 217 YEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDD-PEILANLMRTF 261
             F             A I    + G+  +    V++ G+NDD     A L    
Sbjct: 125 ERFLSITRTGQVKDVWAGIEAALDEGLHPVKLNVVVMGGVNDDEVVDFARLTERL 179


>gi|228927225|ref|ZP_04090288.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|229121710|ref|ZP_04250933.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           95/8201]
 gi|228661754|gb|EEL17371.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           95/8201]
 gi|228832551|gb|EEM78125.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 337

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 26/168 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALA-YIQEKSQIWEVIFTGG 152
           + ++  C   C +C   E+ G       +  +L+  + E     +I+    + ++  TGG
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFIRM--GVNKIRLTGG 75

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211
           +PL+     L  ++  L  +  ++ +   +    +  Q       + LKEAG K V I++
Sbjct: 76  EPLLRKD--LPHLIARLAKLDGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISL 127

Query: 212 -----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                H     N     ++  +  I     AG+ +    V+ KG+ND+
Sbjct: 128 DAIEDHVFKKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDN 175


>gi|163781559|ref|ZP_02176559.1| molybdenum cofactor biosynthesis protein A [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159882779|gb|EDP76283.1| molybdenum cofactor biosynthesis protein A [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 332

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 68/166 (40%), Gaps = 20/166 (12%)

Query: 97  ILLKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           + + +   C   C FC    +E+   Q+  +LS ++    +  +     + +   TGG+P
Sbjct: 13  VRISVTDRCNFRCFFCMPPDKEIEFLQRSELLSYEEIARLVGVLVS-LGVRKARITGGEP 71

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L+     L+ +++ L  I+ ++ +         +   ++ +L   +    K V +++   
Sbjct: 72  LM--RAHLENLVEKLASIEGLRDI-----ALTTNGYTLDRKLDSLVSAGLKRVTVSLITL 124

Query: 215 HPYEFSE---------EAIAAISRLANAGI-ILLSQSVLLKGINDD 250
           +  +F+            I  I      G+  +    V+++G+NDD
Sbjct: 125 NQDKFTSMVGRDVSLNRVIEGIRSARQMGLNPVKVNMVVVRGVNDD 170


>gi|314933749|ref|ZP_07841114.1| Fe-S oxidoreductase [Staphylococcus caprae C87]
 gi|313653899|gb|EFS17656.1| Fe-S oxidoreductase [Staphylococcus caprae C87]
          Length = 448

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQASQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  I+ ++ +R  S    ++  ++  E+I+ +  + K 
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDEIEGLERIRISS----IEASQLTDEVIEVIGNSNK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHV 257


>gi|255656429|ref|ZP_05401838.1| putative radical SAM superfamily protein [Clostridium difficile
           QCD-23m63]
 gi|296450124|ref|ZP_06891885.1| 2-methylthioadenine synthetase [Clostridium difficile NAP08]
 gi|296878505|ref|ZP_06902510.1| 2-methylthioadenine synthetase [Clostridium difficile NAP07]
 gi|296260887|gb|EFH07721.1| 2-methylthioadenine synthetase [Clostridium difficile NAP08]
 gi|296430312|gb|EFH16154.1| 2-methylthioadenine synthetase [Clostridium difficile NAP07]
          Length = 432

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 17/120 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  +C +C     +       + S+D ++ +  ++    +   EV+ TG
Sbjct: 141 KTRAFMKIQDGCDRFCTYC-----IIPYARGRVRSRDIDSIVDEVKKLANNGYKEVVLTG 195

Query: 152 GDPLI----LSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                    L  +  +L  V+K +  I+ ++ +R  S    V+P     E +  + +  K
Sbjct: 196 IHVASYGKDLKDRDIKLLDVIKQINKIEKIERIRLSS----VEPILFTDEFVNEVLKMDK 251


>gi|138894319|ref|YP_001124772.1| coenzyme PQQ synthesis protein PqqE [Geobacillus
           thermodenitrificans NG80-2]
 gi|134265832|gb|ABO66027.1| Coenzyme PQQ synthesis protein PqqE [Geobacillus
           thermodenitrificans NG80-2]
          Length = 372

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ +L   C + C  C R E    +    L+ ++ +  +  I +  +   ++FTGGD
Sbjct: 8   PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYDMDEPM-LVFTGGD 65

Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
           PL+      L K       I   + LR  S  P   P  +  E I+  KE G   +    
Sbjct: 66  PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLARWAFSL 116

Query: 209 ------IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMRT 260
                 I  H       F    I AI  L    I +   +V+ +  N    + +  L+  
Sbjct: 117 DGPNAEIHDHFRGTSGSFD-LTIRAIQYLHELDIPVQINTVISRY-NVHVLDEMVELVEK 174

Query: 261 F 261
            
Sbjct: 175 L 175


>gi|145220314|ref|YP_001131023.1| MiaB-like tRNA modifying enzyme [Prosthecochloris vibrioformis DSM
           265]
 gi|145206478|gb|ABP37521.1| MiaB-like tRNA modifying enzyme [Chlorobium phaeovibrioides DSM
           265]
          Length = 451

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 15/123 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LKL   C   C +C    +   +  +V      + A   +   S   E++ TG  
Sbjct: 153 RTRAFLKLQDGCDYGCAYCTI-PLARGRSRSVPPEVVLQQAQ--MLADSGYREIVLTGVN 209

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    +   L+ +L+ L  I  V  +R  S    ++P  +  EL+  +  +     I 
Sbjct: 210 TGDYRSGTTGFLE-LLRMLEDID-VPRIRISS----LEPDILTDELVALVAASRT---IV 260

Query: 211 IHA 213
            H 
Sbjct: 261 PHF 263


>gi|223044380|ref|ZP_03614414.1| conserved hypothetical protein [Staphylococcus capitis SK14]
 gi|222442249|gb|EEE48360.1| conserved hypothetical protein [Staphylococcus capitis SK14]
          Length = 448

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQASQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  I+ ++ +R  S    ++  ++  E+I+ +  + K 
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDEIEGLERIRISS----IEASQLTDEVIEVIGNSNK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHV 257


>gi|260460192|ref|ZP_05808444.1| Radical SAM domain protein [Mesorhizobium opportunistum WSM2075]
 gi|259033837|gb|EEW35096.1| Radical SAM domain protein [Mesorhizobium opportunistum WSM2075]
          Length = 382

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 15/126 (11%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--------E 146
           D +LLK+   C + C +C+   M G +       + ++A +  + ++             
Sbjct: 12  DTVLLKVASRCNLDCSYCYIYHM-GDEAWRSQPKQMSDAVIQMVAQRLSDQLALQAVPFS 70

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           V+  GG+PL+L   RL+    TLR +  H   +   +         I+  +I  L     
Sbjct: 71  VVLHGGEPLLLGATRLEHFCATLRGVLPHPCGIHIQTNG-----ALISDRIIDVLVRYDV 125

Query: 206 PVYIAI 211
            V ++I
Sbjct: 126 GVSVSI 131


>gi|154482583|ref|ZP_02025031.1| hypothetical protein EUBVEN_00250 [Eubacterium ventriosum ATCC
           27560]
 gi|149736608|gb|EDM52494.1| hypothetical protein EUBVEN_00250 [Eubacterium ventriosum ATCC
           27560]
          Length = 437

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 12/124 (9%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C      G  +   +  +  +A L  +   S   E++ TG +
Sbjct: 147 HTRAHLKIQDGCNNFCSYCIIPYARGRIRSRTM--ESIKAELERLSA-SGFKEIVLTGIN 203

Query: 154 PLILSHKRLQKVLKTLRYIKHV---QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            L       +K++  +    +V   + +R  S    +DP+ +  + ++ L +  K +   
Sbjct: 204 -LSCYDDNGKKLIDVIEMADNVNGIERIRLGS----LDPEVVTEDFVERLGKV-KKICPH 257

Query: 211 IHAN 214
            H +
Sbjct: 258 FHFS 261


>gi|251796225|ref|YP_003010956.1| RNA modification enzyme, MiaB family [Paenibacillus sp. JDR-2]
 gi|247543851|gb|ACT00870.1| RNA modification enzyme, MiaB family [Paenibacillus sp. JDR-2]
          Length = 448

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 34/166 (20%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  +     S   E A   +       EV+ TG  
Sbjct: 142 RTRAFLKIQEGCNNFCTFCIIPWSRGLSRSRDPKSV-LEQAKQLVAS--GYKEVVLTGIH 198

Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
               GD   + + RL  +L  L  I+ ++ +R  S    ++  +I+  +I  L  + K +
Sbjct: 199 TGGYGD--DMENYRLVDLLWDLDKIEGLERIRISS----IEASQIDDAMIDVLNRSTK-M 251

Query: 208 YIAIHANHPYEF--------------SEEAIAAISRLANA--GIIL 237
              +H   P +               ++E  A + R+  A  G+ +
Sbjct: 252 CRHLHI--PLQAGDTSVLKRMRRKYTTDEFAAKLKRIREAMPGVAI 295


>gi|297531022|ref|YP_003672297.1| radical SAM protein [Geobacillus sp. C56-T3]
 gi|297254274|gb|ADI27720.1| Radical SAM domain protein [Geobacillus sp. C56-T3]
          Length = 372

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 67/180 (37%), Gaps = 24/180 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ +L   C + C  C R E    +    L+ ++ +  +  I E  Q   ++FTGGD
Sbjct: 8   PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYEMDQPM-LVFTGGD 65

Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
           PL+      L K       I   + LR  S  P   P  +  E I+  KE G   +    
Sbjct: 66  PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLSRWAFSL 116

Query: 209 ------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMRTF 261
                 I  H        +  I AI  L    I +   +V+ +  N    + +A L+   
Sbjct: 117 DGPNAEIHDHFRGVSGSFDLTIRAIQYLHELDIPVQINTVISRY-NVHVLDEMAALVEKL 175


>gi|296132657|ref|YP_003639904.1| Radical SAM domain protein [Thermincola sp. JR]
 gi|296031235|gb|ADG82003.1| Radical SAM domain protein [Thermincola potens JR]
          Length = 331

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 39/217 (17%), Positives = 81/217 (37%), Gaps = 49/217 (22%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C +YC  C+R    G++    L++++ +A L  I + +    +IF+GG+P +
Sbjct: 3   VSWNTTNQCNMYCDHCYRDA--GAKATEELNTEEGKALLDEIAK-AGFKIMIFSGGEPFM 59

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIV--DPQRINPELIQCLKEAGKP-VYIAIHA 213
                +  ++       H + L  H   P+   +   I P++ + LKE G   V I++  
Sbjct: 60  RED--IFDLVA------HAKKLGLH---PVFGTNGTLITPDVAKKLKELGVMGVGISL-- 106

Query: 214 NHPYEFSEEAIAAISRL--------------ANAGIILLSQSVLLKGINDDPEILANLMR 259
                  +E    + +L                AG+     + L+    D+ E + +   
Sbjct: 107 ---DSLDKEKHDNLRKLKGAWDGAVQGMINCREAGVPFQVHTTLMDWNYDEAEAITDFA- 162

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
             VE+  K ++            F +     + I   
Sbjct: 163 --VEIGAKAHHFF----------FLVPTGRAKNIEEE 187


>gi|56963428|ref|YP_175159.1| 2-methylthioadenine synthetase [Bacillus clausii KSM-K16]
 gi|56909671|dbj|BAD64198.1| 2-methylthioadenine synthetase [Bacillus clausii KSM-K16]
          Length = 445

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 22/129 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  LK+   C  +C FC      G     ++ S+D +  +   Q+   +   E++ TG
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEVVRQAQQLVHAGYKEIVLTG 196

Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                   D   L    L ++L+ L  ++ ++ LR  S    ++  ++  E+I  + ++ 
Sbjct: 197 IHTGGYGED---LKDYSLARLLEDLEKVEGLKRLRISS----IEASQLTDEVIAVIGKSS 249

Query: 205 KPVYIAIHA 213
           K V   +H 
Sbjct: 250 K-VVRHMHI 257


>gi|196248072|ref|ZP_03146774.1| Radical SAM domain protein [Geobacillus sp. G11MC16]
 gi|196212856|gb|EDY07613.1| Radical SAM domain protein [Geobacillus sp. G11MC16]
          Length = 372

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ +L   C + C  C R E    +    L+ ++ +  +  I +  +   ++FTGGD
Sbjct: 8   PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYDMDEPM-LVFTGGD 65

Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
           PL+      L K       I   + LR  S  P   P  +  E I+  KE G   +    
Sbjct: 66  PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLARWAFSL 116

Query: 209 ------IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMRT 260
                 I  H       F    I AI  L    I +   +V+ +  N    + +  L+  
Sbjct: 117 DGPNAEIHDHFRGTSGSFD-LTIRAIQYLHELDIPVQINTVISRY-NVHVLDEMVELVEK 174

Query: 261 F 261
            
Sbjct: 175 L 175


>gi|222055074|ref|YP_002537436.1| MiaB-like tRNA modifying enzyme [Geobacter sp. FRC-32]
 gi|221564363|gb|ACM20335.1| MiaB-like tRNA modifying enzyme [Geobacter sp. FRC-32]
          Length = 438

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 24/146 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
             R  L++ + C  +C +C     +         S   E ALA I+   +    EV+ T 
Sbjct: 145 HTRAFLQVQNGCDAFCSYC-----IVPYARGRSRSVSLEEALAGIRTFAERGFKEVVLTG 199

Query: 151 ---GGDPLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
              G   L L+    L  +L      + V+ +R  S    V+P  ++  LI  L ++   
Sbjct: 200 IHLGAYGLDLNPPLSLLDLLNAAEKERLVERIRIGS----VEPTEVSDALISFLAKSATV 255

Query: 206 --PVYIAIHANHPYEFSEEAIAAISR 229
              ++I + + H        + A++R
Sbjct: 256 CPHLHIPLQSGHDR-----VLKAMNR 276


>gi|261368034|ref|ZP_05980917.1| RNA modification enzyme, MiaB family [Subdoligranulum variabile DSM
           15176]
 gi|282570022|gb|EFB75557.1| RNA modification enzyme, MiaB family [Subdoligranulum variabile DSM
           15176]
          Length = 446

 Score = 45.9 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 35/172 (20%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
             LK+   C   C +C     R  +        ++     A          + E+I    
Sbjct: 147 AYLKIAEGCNNRCHYCAIPLIRGPLRSRPIEDCVAEARWLAG-------EGVRELILVAQ 199

Query: 153 DPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           DP            + ++L  L+ I  ++ +R         P+RI+   I  +    K V
Sbjct: 200 DPTAYGEDWGKPGAVCELLDRLQQIDGIRWIRI----LYAYPERISDAFIAAMVRNTKVV 255

Query: 208 -YIAIHANHPYEF----------SEEAIAAISRLANA--GIILLSQSVLLKG 246
            Y+ +   H  +             +   AI+RL  A  GI L   + L+ G
Sbjct: 256 PYLDLPIQHCDDAVLKAMNRRGGRADIEDAIARLRAAIPGITLR--TTLIAG 305


>gi|317503044|ref|ZP_07961124.1| Fe-S oxidoreductase [Prevotella salivae DSM 15606]
 gi|315665844|gb|EFV05431.1| Fe-S oxidoreductase [Prevotella salivae DSM 15606]
          Length = 446

 Score = 45.9 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  +C +C      G  +   +SS  K  E A A         E++ TG
Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTISSLIKQAEEAAA-----EGGKEIVLTG 207

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
              GD    +H+R   ++K L  ++ ++  R  S    ++P  I+ ELI    E+     
Sbjct: 208 VNIGDFGETTHERFIDLVKALDKVEGIKRFRISS----LEPDLIDDELIAFCAESR---A 260

Query: 209 IAIHA 213
              H 
Sbjct: 261 FMPHF 265


>gi|225011453|ref|ZP_03701891.1| molybdenum cofactor biosynthesis protein A [Flavobacteria bacterium
           MS024-2A]
 gi|225003956|gb|EEG41928.1| molybdenum cofactor biosynthesis protein A [Flavobacteria bacterium
           MS024-2A]
          Length = 335

 Score = 45.9 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 22/169 (13%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           H Y   + + L   C + C +C  +E V       L + +   +LA +  K+ + ++  T
Sbjct: 16  HNY---LRISLTERCNLRCSYCMPQEGVTLTPKPQLMNAEEIFSLAALFVKNGVNKIRLT 72

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYI 209
           GG+PL+        +L  L  +  VQ+          +   I    I  LK++G   + I
Sbjct: 73  GGEPLVRKD--FPDILSRLSQLP-VQL------SLTSNAFSI-DRHIPLLKDSGVHSINI 122

Query: 210 AI---HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
           ++    A    E +     ++    I +L   G  +   +VL+KGINDD
Sbjct: 123 SLDTLQAKRFQEITFRNYFDQVHQNILKLIREGFNVKINAVLMKGINDD 171


>gi|153854410|ref|ZP_01995688.1| hypothetical protein DORLON_01683 [Dorea longicatena DSM 13814]
 gi|149752936|gb|EDM62867.1| hypothetical protein DORLON_01683 [Dorea longicatena DSM 13814]
          Length = 442

 Score = 45.9 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 29/153 (18%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLS 127
           +E  D   +  +  L         R  +K+   C  +C +C     R  +    + +VL 
Sbjct: 134 QEILDINHEKVYEDLHLSTAAEHTRAYIKVQDGCNQFCSYCIIPFARGRVRSRSRDSVLD 193

Query: 128 SKDTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
              T +A  Y        EV+ T       G D        L  ++  +  ++ ++ +R 
Sbjct: 194 EVKTLSANGY-------KEVVLTGIHLSSYGIDC----DDNLLSLILAIHEVEGIERIRL 242

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
            S    ++P+ I  E  Q + +  K   +  H 
Sbjct: 243 GS----LEPRIITEEFAQTIAKLPK---MCPHF 268


>gi|294778157|ref|ZP_06743588.1| radical SAM domain protein [Bacteroides vulgatus PC510]
 gi|294448016|gb|EFG16585.1| radical SAM domain protein [Bacteroides vulgatus PC510]
          Length = 433

 Score = 45.9 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 52/119 (43%), Gaps = 13/119 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P+R+   +   C + C+ CF       +   + SS DT+  L+  +  + I  +  TGG+
Sbjct: 107 PERVDFLITKHCNLACKHCFEGSSPSFEVKRI-SSSDTDRILSQFEA-ANIQTLKITGGE 164

Query: 154 PLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           P       +   L   + I+ H + +   +   +++ QRI+      +K+    + I++
Sbjct: 165 PFSHPD--IDNFL--FKAIQCHFETI-ILTNALLLNKQRID-----MIKKGHIQLGISL 213


>gi|302541833|ref|ZP_07294175.1| putative radical SAM domain protein [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302459451|gb|EFL22544.1| putative radical SAM domain protein [Streptomyces himastatinicus
           ATCC 53653]
          Length = 326

 Score = 45.9 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 13/149 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +LL +   CPV C  C            +       + +  +    ++  V  +GG+P +
Sbjct: 20  VLLFITDRCPVGCAHCSVDSRP--DSPRITDHALFASIVDQLAALPELRMVGISGGEPFV 77

Query: 157 LSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRIN--PELIQCLKEAGKPVYIAIHA 213
              + L   +  L     HV +             R +  P+ I  + E    VY++  A
Sbjct: 78  -ERRALALAVTRLAAADKHVVLYTSG-----FW-ARSDHAPQWIHRVLEQSAAVYLSTDA 130

Query: 214 NHPYEFSEE-AIAAISRLANAGIILLSQS 241
           +H      E    A   +A  G+ ++ Q+
Sbjct: 131 HHVASQGPERFRNAARIIARHGLPIVVQA 159


>gi|157737373|ref|YP_001490056.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri RM4018]
 gi|114461634|gb|ABI75082.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri]
 gi|157699227|gb|ABV67387.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri RM4018]
          Length = 422

 Score = 45.9 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 10/125 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C    + G       S       +  +       E I TG +
Sbjct: 139 KSRAFIKIQEGCDFRCSYCIIPYVRGD--ARSYSEDKILEQVTTLASN-GFGEFILTGTN 195

Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                 K+   L K+LK +  IK V+ +R  S    ++P +I+ E  + + E     ++ 
Sbjct: 196 VGSYGKKQHTSLAKLLKKMSLIKGVRRIRMGS----IEPIQIDDEFKEIINEPFMAKHLH 251

Query: 211 IHANH 215
           I   H
Sbjct: 252 IALQH 256


>gi|189501679|ref|YP_001957396.1| hypothetical protein Aasi_0223 [Candidatus Amoebophilus asiaticus
           5a2]
 gi|189497120|gb|ACE05667.1| hypothetical protein Aasi_0223 [Candidatus Amoebophilus asiaticus
           5a2]
          Length = 441

 Score = 45.9 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 20/128 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  LK+   C  +C FC               S   E+ +   +      I E++ TG
Sbjct: 140 RTRTFLKVQDGCNYHCSFCTI-----PLARGKSRSDTIESIVEQARKIADQGIKEIVLTG 194

Query: 152 ---GDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
              GD  I+ ++R      +++ L  +  ++  R  S    ++P  +  E+IQ + ++G+
Sbjct: 195 VNIGDYGIIDNRRQTNFLSLIEALEKVVDIKRFRISS----IEPNLLTDEIIQFVAQSGR 250

Query: 206 PVYIAIHA 213
                 H 
Sbjct: 251 ---FVPHF 255


>gi|329122066|ref|ZP_08250674.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister micraerophilus
           DSM 19965]
 gi|327466873|gb|EGF12389.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister micraerophilus
           DSM 19965]
          Length = 445

 Score = 45.9 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 21/126 (16%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG-- 151
           R  +K+   C  YC FC     +       L S+  E A+  I++  +    EV+ TG  
Sbjct: 155 RAFVKVQEGCDNYCTFC-----IIPYARGRLKSRKQEDAVDEIKKLVEKGYREVVLTGIH 209

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D  + +   L  ++  L  I ++  +R  S    ++   ++ ELI  +K   K 
Sbjct: 210 LGNYGKD--LRNGTSLSTLVSELLKIPNLLRIRLGS----IESVELSDELINIIKN-EKR 262

Query: 207 VYIAIH 212
           V   +H
Sbjct: 263 VCHHLH 268


>gi|308172965|ref|YP_003919670.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307605829|emb|CBI42200.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Bacillus amyloliquefaciens DSM 7]
 gi|328552610|gb|AEB23102.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens TA208]
          Length = 500

 Score = 45.9 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 45/233 (19%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
           I D   + +  +     +  +   +  CP  C +C         +   + S         
Sbjct: 154 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 213

Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
           +    ++++   ++  + F GG P  ++ + +  + + + R   +V+ +R  + V    P
Sbjct: 214 QKIGEWLKQHDIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPNVENIREIT-VEAGRP 272

Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
             I  E +  L +     + I      P  +  E + AI R           +V      
Sbjct: 273 DTITEEKLAVLNKYKIDRISIN-----PQSYENETLKAIGR---------HHTV------ 312

Query: 249 DDPEILAN--LMRTFVELRIKPYYLHHPDLA-----AGTSHFRLTIEEGQKIV 294
              E +    L R      I      + DL       GT+ FR +++E +K++
Sbjct: 313 --EETIEKYHLSRKHGMNNI------NMDLIIGLPGEGTAEFRHSLDETEKLM 357


>gi|299136219|ref|ZP_07029403.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298602343|gb|EFI58497.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 370

 Score = 45.9 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 25/131 (19%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGT-------VLSSKDTEAALAYIQ------EK 141
           D +L+K+   C + C +C+    V +Q  T        +S +  E  +  +       + 
Sbjct: 4   DTVLIKVASRCNINCSYCY----VYNQGDTSWQRMPKHMSFEIVEDVIRQLATLYRDQDH 59

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCL 200
              + V+  GG+PL+L    L+ +LK L   +         SR    +   I+ +L++  
Sbjct: 60  P--FAVVLHGGEPLLLPRNILEALLKGLADCLPAT-----CSRSIQTNGTLIDDDLLELC 112

Query: 201 KEAGKPVYIAI 211
              G  + ++I
Sbjct: 113 VRTGTTLSVSI 123


>gi|160946408|ref|ZP_02093617.1| hypothetical protein PEPMIC_00368 [Parvimonas micra ATCC 33270]
 gi|158447524|gb|EDP24519.1| hypothetical protein PEPMIC_00368 [Parvimonas micra ATCC 33270]
          Length = 480

 Score = 45.9 bits (108), Expect = 0.010,   Method: Composition-based stats.
 Identities = 25/156 (16%), Positives = 57/156 (36%), Gaps = 25/156 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + L   C   CR CF +    +  G  ++    +  +  +     +  V+ TGG+PL+  
Sbjct: 127 MVLTTKCNFRCRHCFIK---NNSDGFTMNFLLWKRIIDKL-CNQGLTSVVVTGGEPLLYK 182

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
                  L  +    + + L  H    + +   I+   I+ +++    V + +  +    
Sbjct: 183 E------LTPILNYINDKKLNIH---LLTNGYLIDDNFIEEIRKF-NNVIVQVSLDGSNS 232

Query: 219 FS-----------EEAIAAISRLANAGIILLSQSVL 243
            +           +     I +L ++GI++    VL
Sbjct: 233 ITQKYQRLIENSFDVVTKNIKKLTDSGIVVNVAMVL 268


>gi|94263035|ref|ZP_01286854.1| Radical SAM:Molybdenum cofactor synthesis-like [delta
           proteobacterium MLMS-1]
 gi|93456578|gb|EAT06686.1| Radical SAM:Molybdenum cofactor synthesis-like [delta
           proteobacterium MLMS-1]
          Length = 338

 Score = 45.9 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 79/224 (35%), Gaps = 39/224 (17%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L +   C + CR+C  +      +  +LS ++ E  +  +     I +V  TGG+PL+
Sbjct: 25  VRLAVTDRCNLNCRYCRPKGPCEEPRRELLSYEELERLVRLLVAM-GISKVRLTGGEPLV 83

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
                +   +  LR I  ++ L   +    +    ++   ++ L+ +G  + +    +  
Sbjct: 84  --RHGMIAFMGRLRAIAGLEQLALTTNA-TLLASHLDD--LRQLRLSGLNISLDT-LSAA 137

Query: 217 Y-------EFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRT-------- 260
                   +        I      GI L   +V+ +GIN D+   LA L           
Sbjct: 138 RFATITGQDLFGRVFKVIEAALATGIPLKINAVVQEGINTDELLDLARLAEKWPLEVRYI 197

Query: 261 ---------FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
                                  DLA   +HF+  + E  +IV 
Sbjct: 198 EPMPFAGRDEFSAG-------QWDLARLRAHFQANLPELTEIVR 234


>gi|323486972|ref|ZP_08092287.1| hypothetical protein HMPREF9474_04038 [Clostridium symbiosum
           WAL-14163]
 gi|323399744|gb|EGA92127.1| hypothetical protein HMPREF9474_04038 [Clostridium symbiosum
           WAL-14163]
          Length = 450

 Score = 45.9 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 38/162 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       +  T      +
Sbjct: 82  LMSDYRSCRNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 131

Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
             K + +++K  L  I     +   S              ++CL          +H    
Sbjct: 132 KDKDIDRIIKYRLAPI----NISVQS----------TNPELRCL---------MLH---- 164

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
             F+ +A+  I  L  A I +  Q VL K +ND  E+  ++ 
Sbjct: 165 NRFAGDALKKIDTLYEAEIPMNGQIVLCKNVNDKEELERSIR 206


>gi|313891670|ref|ZP_07825277.1| tRNA methylthiotransferase YqeV [Dialister microaerophilus UPII
           345-E]
 gi|313119948|gb|EFR43133.1| tRNA methylthiotransferase YqeV [Dialister microaerophilus UPII
           345-E]
          Length = 445

 Score = 45.9 bits (108), Expect = 0.011,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 21/126 (16%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG-- 151
           R  +K+   C  YC FC     +       L S+  E A+  I++  +    EV+ TG  
Sbjct: 155 RAFVKVQEGCDNYCTFC-----IIPYARGRLKSRKQEDAVDEIKKLVEKGYREVVLTGIH 209

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D  + +   L  ++  L  I ++  +R  S    ++   ++ ELI  +K   K 
Sbjct: 210 LGNYGKD--LRNGTSLSTLVSELLKIPNLLRIRLGS----IESVELSDELINIIKN-EKR 262

Query: 207 VYIAIH 212
           V   +H
Sbjct: 263 VCHHLH 268


>gi|197118653|ref|YP_002139080.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem]
 gi|197088013|gb|ACH39284.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem]
          Length = 326

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 62/237 (26%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + CR+C   E V       VLS  D    ++     + I ++  TGG+PL+ 
Sbjct: 16  LSVTDRCNLRCRYCMPEEGVEKLDHSQVLSYADLLR-ISTEAVAAGIEKIRVTGGEPLV- 73

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
             K +   L+ L  +  ++ L   +         +  E+ Q L+EAG   + I++     
Sbjct: 74  -RKGIISFLERLGALPGLKELVLTTNGL------LLKEMAQGLREAGVQRLNISL----- 121

Query: 217 YEFSEEAIAAISR---LAN----------AG-----IILLSQSVLLKGINDDPEIL--AN 256
                E  AAI+R   L            AG     I +    V+++G+NDD EIL    
Sbjct: 122 DSLKPETFAAITRGGELKRVLDGLEAAEKAGFPPHKINV----VVMRGVNDD-EILDFVE 176

Query: 257 LMRTFVELRIKPY------YLHHPDLAAGTSHFR---LTIEEGQKIV--ASLKEKIS 302
           L         +PY      Y+       G + +R   +   E ++ +    L E++S
Sbjct: 177 LTMK------RPYAVRFIEYM----PTCGDADWRELCVPGAEIRERIGERYLIEEVS 223


>gi|323692019|ref|ZP_08106267.1| PDZ domain-containing protein [Clostridium symbiosum WAL-14673]
 gi|323503942|gb|EGB19756.1| PDZ domain-containing protein [Clostridium symbiosum WAL-14673]
          Length = 450

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 38/162 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       +  T      +
Sbjct: 82  LMSDYRSCRNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 131

Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
             K + +++K  L  I     +   S              ++CL          +H    
Sbjct: 132 KDKDIDRIIKYRLAPI----NISVQS----------TNPELRCL---------MLH---- 164

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
             F+ +A+  I  L  A I +  Q VL K +ND  E+  ++ 
Sbjct: 165 NRFAGDALKKIDTLYEAEIPMNGQIVLCKNVNDKEELERSIR 206


>gi|258514903|ref|YP_003191125.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257778608|gb|ACV62502.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 358

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 48/154 (31%), Gaps = 39/154 (25%)

Query: 90  VHRYPDRILLKL-------LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
              +P+R +  +        +VC   CRFC        Q          +     I E  
Sbjct: 46  QRLHPERQVTFVIDRNINYTNVCLSRCRFC---AFYRDQNAPDAYIIGWQELYEKIAETV 102

Query: 143 QI--WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
                E++  GG   +     L   L  LRYIK    +  HS  P        PE++  +
Sbjct: 103 DAGGTELLIQGG---LHPDLTLDYYLDMLRYIKSNFDIHIHSFSP--------PEVMHMV 151

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           K +G  +                   + +L  AG
Sbjct: 152 KGSGLSI----------------KEVLEKLRAAG 169


>gi|302874736|ref|YP_003843369.1| hypothetical protein Clocel_1861 [Clostridium cellulovorans 743B]
 gi|307690649|ref|ZP_07633095.1| hypothetical protein Ccel74_21016 [Clostridium cellulovorans 743B]
 gi|302577593|gb|ADL51605.1| protein of unknown function DUF512 [Clostridium cellulovorans 743B]
          Length = 443

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 60/161 (37%), Gaps = 52/161 (32%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C   C FCF  ++    + T+    D ++ L+++Q       +  T      +    + 
Sbjct: 86  SCHNKCIFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FITLT-----NMKDDDID 135

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP------- 216
           ++++                       RI+            P+ +++H  +P       
Sbjct: 136 RIIR----------------------YRIS------------PINVSVHTTNPELRREML 161

Query: 217 -YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
              F+ E +  + +LA+AGI + +Q VL   IN+  E++  
Sbjct: 162 NNRFAGELMEKLKKLADAGITINTQIVLCPEINNGEELVRT 202


>gi|162451211|ref|YP_001613578.1| hypothetical protein sce2939 [Sorangium cellulosum 'So ce 56']
 gi|161161793|emb|CAN93098.1| moaA3 [Sorangium cellulosum 'So ce 56']
          Length = 373

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 38/241 (15%), Positives = 74/241 (30%), Gaps = 42/241 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  + + +   C   C +C      G      L +         ++  + I  V  TGG+
Sbjct: 58  PRSVRISVTDRCDFACTYCRPSRHDG-YADGKLMTAAWRTMFEALR-DAGIRRVRLTGGE 115

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+     +  ++  L  +    +          +  ++              + ++I  
Sbjct: 116 PLLHP--EIVSIVGCLAALGFEDL------ALTTNASQLARLAGALRAAGLHRLNVSIDT 167

Query: 214 NHPYEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVEL 264
             P  F E             I     AG   +   +V+L+G+NDD      L     E 
Sbjct: 168 LDPGRFGEMTRGGELARVLDGIDAAIAAGFSPIKLNTVVLRGVNDDEIERLALWA--WER 225

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIV-------ASLKEKISGLCQPFYILDLPGGY 317
           R+ P       +          I EG ++V       A ++ +++    P    +     
Sbjct: 226 RMVP--RFLEVM---------PIAEGARLVGKHLVTAAEMRARLAEHLLPE---EAAAEP 271

Query: 318 G 318
           G
Sbjct: 272 G 272


>gi|283954557|ref|ZP_06372076.1| hypothetical protein C414_000230057 [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793961|gb|EFC32711.1| hypothetical protein C414_000230057 [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 417

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 18/132 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     + T+L   +   A  Y        E++ 
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKTLLKQVEILGANGY-------SEIVL 184

Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +     L +   L K+L+ +  I  ++ +R  S    ++P +I+   ++ L EA   
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDEAWLE 240

Query: 207 VYIAIHANHPYE 218
            ++ I   H  E
Sbjct: 241 RHLHIALQHTSE 252


>gi|310826527|ref|YP_003958884.1| 2-methylthioadenine synthetase [Eubacterium limosum KIST612]
 gi|308738261|gb|ADO35921.1| 2-methylthioadenine synthetase [Eubacterium limosum KIST612]
          Length = 435

 Score = 45.5 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 15/146 (10%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSS 128
              D + ++++  L     +   R  LK+   C  +C +C     R  +       VLS 
Sbjct: 123 FVSDIMREHHYEDLNITETKGKTRAFLKVQEGCNQFCTYCIVPFARGPVRSRPVDAVLSE 182

Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIV 187
               AA  Y +       +   G D   L     L  +++ +  ++ V+ +R  S    +
Sbjct: 183 VKRVAAHGYAEVVLTGIHIASYGVD---LGDGVDLLSLIRAVDKVEGVKRIRLGS----L 235

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHA 213
           +P  +  E +Q L E         H 
Sbjct: 236 EPLLLTEEFVQGLSEVR---AFCPHF 258


>gi|227872811|ref|ZP_03991125.1| 2-methylthioadenine synthase [Oribacterium sinus F0268]
 gi|227841338|gb|EEJ51654.1| 2-methylthioadenine synthase [Oribacterium sinus F0268]
          Length = 478

 Score = 45.5 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 32/168 (19%)

Query: 66  ELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           E +  P E   P+ +   +  L     +   R  +K+   C  +C +C         +G 
Sbjct: 124 ENDASPMEPFSPVREEGEYENLFLSKPKDKSRAFVKVQDGCNQFCAYCIIPY----VRGR 179

Query: 125 VLSSKDTEAALAYIQ--EKSQIWEVIFTGG-------DPLILSHKR----------LQKV 165
           + S K+ E  L  I+   K    EV+ TG        D   LS++           L  +
Sbjct: 180 IRSRKE-EDCLEEIRHLAKEGFQEVVLTGIHLSSYGLDFENLSYEYASRKAETGEALLHL 238

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           +  +  I  +Q +R  S    ++P+ I    +  LKE      I  H 
Sbjct: 239 ISEVGKIPGIQRIRLGS----LEPRIITERFLAGLKEVE---AICPHF 279


>gi|228474586|ref|ZP_04059317.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis
           SK119]
 gi|228271249|gb|EEK12617.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis
           SK119]
          Length = 340

 Score = 45.5 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 44/177 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G       K  +L+  +    +A +  +  + ++  TGG+
Sbjct: 18  ISVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFDEITT-IAKVYAELGVKKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+     L K+++ L  I+ ++ +   +                 LK+ G+ +Y     
Sbjct: 77  PLLRRD--LYKLIEKLNRIEGIEDIGMTTNGL-------------LLKKHGQKLYDAGLR 121

Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
            I +  +      +E   AI+        +L Q               V+ KGINDD
Sbjct: 122 RINVSLDA---IDDEVFQAINNRNIKASTILQQIDYAVSIGFHVKVNVVIQKGINDD 175


>gi|123485105|ref|XP_001324419.1| radical SAM domain containing protein [Trichomonas vaginalis G3]
 gi|121907301|gb|EAY12196.1| radical SAM domain containing protein [Trichomonas vaginalis G3]
          Length = 296

 Score = 45.5 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
            + +  L  C  +C+FCF R   G +  + L  ++    +  I +   +  + F GG+P 
Sbjct: 6   TVNIHYLRSCNYHCKFCFHR---GIENSSTLKLEEWHKIIDTIAKSGLVKRINFAGGEPF 62

Query: 156 ILSHKRLQKV 165
           +L    +  +
Sbjct: 63  MLRKHIVDLI 72


>gi|162453511|ref|YP_001615878.1| hypothetical protein sce5235 [Sorangium cellulosum 'So ce 56']
 gi|161164093|emb|CAN95398.1| hypothetical protein sce5235 [Sorangium cellulosum 'So ce 56']
          Length = 423

 Score = 45.5 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 18/156 (11%)

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P + E       R D     +   +     R     +L + + C   C FCF +    +
Sbjct: 116 VPTRHEEITAEAFRLD-----DAGLIDWAQCRPRSISVLPVANACQARCAFCFSKA--SA 168

Query: 121 QKGTVLSSKDTEAALAYIQEKSQI---WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
                  S   E  L + +   +      VI  GG+P +L  +RL+ +++ L  +     
Sbjct: 169 SDLARQQSATLERYLDWARRAKERGAERAVITGGGEPTLLEPERLRALVRGLSEL----- 223

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIH 212
             F   + I +  R++   ++ L++AG   + ++ H
Sbjct: 224 --FPKSLLITNGARLDLAQVEELRDAGLTTLAVSRH 257


>gi|78187401|ref|YP_375444.1| Elongator protein 3/MiaB/NifB [Chlorobium luteolum DSM 273]
 gi|78167303|gb|ABB24401.1| GTP cyclohydrolase subunit MoaA [Chlorobium luteolum DSM 273]
          Length = 339

 Score = 45.5 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 24/179 (13%)

Query: 86  LKGIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           +  +  R+  RI    + L  +C + C +C R E        ++S  +  A +  +    
Sbjct: 8   IPQLEDRFQRRITYARIALTRLCNLRCSYCMREEHESGTAAAMMSFSEVTAIIRALAAM- 66

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            I +V  TGG+PL+ +   +  ++   +    ++ +   +         +    +  L E
Sbjct: 67  GIKKVRLTGGEPLLRND--ISDIVLAAKQTPGIEKVTLTTNG------LLLDRHLDRLLE 118

Query: 203 AGKPVYIAIHANH--PYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
           AG    I I  +   P  +   A         A + RL   G + +    V+L+G+NDD
Sbjct: 119 AGID-AINISIDSLQPKRYQAIARRDEYSRVKANLDRLIGIGTVPVKINVVMLRGVNDD 176


>gi|260911507|ref|ZP_05918095.1| Fe-S oxidoreductase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260634371|gb|EEX52473.1| Fe-S oxidoreductase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 446

 Score = 45.5 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 70/218 (32%), Gaps = 42/218 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C               S   + A           E++ TG +
Sbjct: 153 RTRYFLKVQDGCDYFCTYCTI-PFARGFSRNPSISSLVQQAQD--AANEGGKEIVLTGVN 209

Query: 154 PLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                   ++R   ++K L  ++ +Q  R  S    ++P  +  ELI     +       
Sbjct: 210 IGEFKGEGNERFIDLVKALDQVEGIQRFRISS----IEPNLLTDELIDYCATSR---AFM 262

Query: 211 IHANHP-YEFSEEAIAAISR-----LANAGIILLSQ-----------SVLLKG-----IN 248
            H + P    S+E +  + R     L    + L+ Q            V  +G       
Sbjct: 263 PHFHIPLQSGSDEVLKLMQRRYDTALFAHKVQLIKQRIPNAFIGVDVMVGSRGEEPAYFE 322

Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286
           D    L +L     +L + PY         GT+  R+ 
Sbjct: 323 DCYNFLKSL--DISQLHVFPYS-----ERPGTAALRIP 353


>gi|260437149|ref|ZP_05790965.1| RNA modification enzyme, MiaB family [Butyrivibrio crossotus DSM
           2876]
 gi|292810461|gb|EFF69666.1| RNA modification enzyme, MiaB family [Butyrivibrio crossotus DSM
           2876]
          Length = 439

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 19/148 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIFTGG 152
           LK+   C  +C +C    + G+ +   +   +      Y+ +    ++     E+   G 
Sbjct: 147 LKIAEGCDKHCTYCSIPMIRGAYR--SVPMDELVKEAEYLADNGVKELIIVAQEITVYGK 204

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
           D  +   K+L ++L  L  I  +Q +R         P+ I  ELI+ ++   K   YI +
Sbjct: 205 D--LYGEKKLPELLHRLCKIPGIQWIRL----LYCYPEEITDELIETIRTEKKICHYIDM 258

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLS 239
              H    S++ + A+ R     + L +
Sbjct: 259 PIQHA---SDKILKAMGR-RTNNVELRN 282


>gi|257062817|ref|YP_003142489.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
 gi|256790470|gb|ACV21140.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
          Length = 321

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 47/234 (20%), Positives = 88/234 (37%), Gaps = 46/234 (19%)

Query: 99  LKLLHVCPVY-CRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPL 155
           L +   CP   C FC F + M   +    +  +D EA LA +       E I  G G+PL
Sbjct: 19  LPVAKGCPYNKCAFCDFYKHMTYRE----IPLEDIEAELARVSNAGGKPERIMLGDGNPL 74

Query: 156 ILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI----- 209
            L   RL+K+++ + + +     L   + V  ++ +    + +  L   G  +       
Sbjct: 75  WLPFDRLKKIVEMIEHYLPSCTTLCSDASVLAIESK--TDDELAWLARHGYRMAYVGIES 132

Query: 210 ----AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL-------KGINDDPEILANLM 258
                +        +++A   I+RL  AGI   +   ++       +GI  +    A L+
Sbjct: 133 GLDDVLEFMDKDHLNDQAREQIARLHKAGIDFGAH--IITGAAGNGRGIE-NARATAALI 189

Query: 259 RTFVELRIKPYYLHHPDL---AAGTSHFRLTIEEG-------QKIVASLKEKIS 302
                   +P  +H  D     A  +   L  E+G        + +  ++E +S
Sbjct: 190 NEL-----RP--VHICDFSLYVASVTELGLKEEDGEFVRASMLENMREMREFVS 236


>gi|40063022|gb|AAR37878.1| molybdenum cofactor biosynthesis protein A [uncultured marine
           bacterium 560]
          Length = 331

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 20/162 (12%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C   C +C        + +  VLS ++    +    E   + +V  TGG+PL L
Sbjct: 17  VSVTDHCNYRCHYCRDEDHQTHTTRSEVLSFEEIVKIVRLFAE-LGVTKVRLTGGEPL-L 74

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
               L  + + L  I  +      + +P+     + P     LK  G   V I+I +  P
Sbjct: 75  RRDILD-LTRMLGDIPGL------TEIPLSTNAHLLPSFAGKLKNHGINRVNISIDSLIP 127

Query: 217 ---YEFSEE-----AIAAISRLANAGI-ILLSQSVLLKGIND 249
               E + +      I  I     AG+  +    V++KGIND
Sbjct: 128 ERFKEITRDGDLAKVIKGIDAAIAAGMSPVKLNMVVMKGIND 169


>gi|170702587|ref|ZP_02893460.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           IOP40-10]
 gi|170132498|gb|EDT00953.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           IOP40-10]
          Length = 372

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 48/248 (19%), Positives = 87/248 (35%), Gaps = 61/248 (24%)

Query: 85  PLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE-- 140
           PL  +    P R L L ++  C   C +C  R+  G     + SS+    A L  I    
Sbjct: 31  PLDTLAR--PLRDLRLSVIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAF 88

Query: 141 -KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV--------------------QILR 179
               + ++  TGG+PL+   + L  +++ L  +  V                    + LR
Sbjct: 89  ISLGVEKIRLTGGEPLL--RRNLGALIERLATLTTVDGKPVEIALTTNGSLLAAKARSLR 146

Query: 180 FH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-II 236
               SRV +     I+  + + + +A  PV   +             A I     AG   
Sbjct: 147 DAGLSRVTVSL-DAIDDAVFRRMSDADVPVARVL-------------AGIEAAQAAGLAP 192

Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIE 288
           +   +V+ +G NDD   +  L+R F    +      Y         G S +     +   
Sbjct: 193 VKVNAVIERGANDD--QILPLVRHFRHSGVAVRFIEY-----MDVGGASAWSGDKVVPAT 245

Query: 289 EGQKIVAS 296
             ++++ +
Sbjct: 246 RMRELIEA 253


>gi|297584652|ref|YP_003700432.1| RNA modification enzyme, MiaB family [Bacillus selenitireducens
           MLS10]
 gi|297143109|gb|ADH99866.1| RNA modification enzyme, MiaB family [Bacillus selenitireducens
           MLS10]
          Length = 441

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  +           A   ++      E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRKP-EDVLSQANQLVEA--GYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   +    L  +L+ L  I+ ++ +R  S    ++  +I  E+I+ +  + K 
Sbjct: 199 TGGYGED---MKDYNLAGLLRDLETIEGLRRIRISS----IEASQITDEVIEVINRSDK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVNHLHI 257


>gi|118602689|ref|YP_903904.1| GTP cyclohydrolase subunit MoaA [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
 gi|118567628|gb|ABL02433.1| GTP cyclohydrolase subunit MoaA [Candidatus Ruthia magnifica str.
           Cm (Calyptogena magnifica)]
          Length = 331

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 24/165 (14%)

Query: 99  LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           L +   C   C +C R        ++  +LS +D E  +    +   I +V  TGG+PL+
Sbjct: 17  LSVTEHCNYRCFYC-RDDEHKPNCKRKDILSYEDIEKIVQLFAQ-LGITKVRLTGGEPLL 74

Query: 157 LS-HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
                ++ K++  +  I  V         P+     +  +  + L + G   V I+I + 
Sbjct: 75  RRGISKIAKLVSRIDGIDDV---------PLSTNAHLLEKFAKKLYQNGINRVNISIDSL 125

Query: 215 HPY---EFSE-----EAIAAISRLANAG-IILLSQSVLLKGINDD 250
            P    E +      +    I      G   +    V ++G+NDD
Sbjct: 126 IPKRFEEITHGGDLIQVTKGIDAAIQTGMAPIKINVVTMRGVNDD 170


>gi|50843535|ref|YP_056762.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III
           oxidase [Propionibacterium acnes KPA171202]
 gi|50841137|gb|AAT83804.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III
           oxidase [Propionibacterium acnes KPA171202]
          Length = 426

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 66/208 (31%), Gaps = 45/208 (21%)

Query: 93  YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            P  ++ ++   C + C+ C    +      Q       +      +Y +    +   I 
Sbjct: 45  KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELINQLTSYERPYPML---IL 101

Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           TGGD        L  +++  +    HV I       P V P     + ++ ++EAG  + 
Sbjct: 102 TGGDCFERPD--LVDLIEYAVSKGLHVSI------SPSVTP-LFTRDRVRAVQEAGVSIM 152

Query: 209 IA--------IH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDD 250
                      H          +H        + A   L   G+     +V   K I++ 
Sbjct: 153 SMSLDGGSATTHDAFRGFPGTFDH-------TVEACHMLRELGMKFQLNTVFTAKNIHEA 205

Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAA 278
           P++L N     ++L    +Y        
Sbjct: 206 PQMLKNA----IDLGAMMFYTFMLVPTG 229


>gi|300854432|ref|YP_003779416.1| hypothetical protein CLJU_c12460 [Clostridium ljungdahlii DSM
           13528]
 gi|300434547|gb|ADK14314.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 444

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 71/205 (34%), Gaps = 58/205 (28%)

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           E+     E  D   +  +    G+    P   ++     C   C FCF  +M    + T+
Sbjct: 51  EIEKQSGEVWDLEIEKEYDEELGLEFEEP---IIDKPKSCHNKCIFCFIDQMPKGMRDTL 107

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
               D ++ LA++Q       V  T      ++ + + +++K                  
Sbjct: 108 YFKDD-DSRLAFLQGN----FVTLT-----NMNDEEIDRIIK------------------ 139

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHP--------YEFSEEAIAAISRLANAGIIL 237
                RI+            P+ +++H  +P         +F+      + RL   GI +
Sbjct: 140 ----YRIS------------PINVSVHTTNPDLRIKMINNKFAGNIYTLLKRLTQNGIKI 183

Query: 238 LSQSVLLKGINDDPE---ILANLMR 259
             Q VL  GIND  E    + +L R
Sbjct: 184 NCQIVLCPGINDGAEFKRTVEDLYR 208


>gi|319400912|gb|EFV89131.1| RNA modification enzyme, MiaB family protein [Staphylococcus
           epidermidis FRI909]
          Length = 448

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  I+ ++ +R  S    ++  ++  E+I  +  + K 
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|288927648|ref|ZP_06421495.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330482|gb|EFC69066.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 446

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 19/156 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C               +   + A           E++ TG +
Sbjct: 153 RTRYFLKVQDGCDYFCTYCTI-PFARGFSRNPSIASLVQQAHD--AANDGGKEIVLTGVN 209

Query: 154 PLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                   ++R   ++K L  ++ +Q  R  S    ++P  +  ELI     +       
Sbjct: 210 IGEFKGGGNERFIDLVKALDQVEGIQRFRISS----IEPNLLTDELIDYCASSR---AFM 262

Query: 211 IHANHP-YEFSEEAIAAISR-----LANAGIILLSQ 240
            H + P    S+E +  + R     L    + L+ Q
Sbjct: 263 PHFHIPLQSGSDEVLKLMQRRYDTALFAHKVQLIKQ 298


>gi|311067471|ref|YP_003972394.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942]
 gi|310867988|gb|ADP31463.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942]
          Length = 500

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 15/161 (9%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDT 131
           I D   + +  +     +  +   +  CP  C +C F    +  Q G V S       + 
Sbjct: 154 IVDRQLAAVPDLYQVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHFEI 213

Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
           +    +++    ++  + F GG P  ++ + +  + + + R    V+ +R  + V    P
Sbjct: 214 QKIGEWLKRHEIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKQIREIT-VEAGRP 272

Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
             I  E +  L +     + I      P  +  E + AI R
Sbjct: 273 DTITEEKLDVLNKYHIDRISIN-----PQSYENETLKAIGR 308


>gi|262369704|ref|ZP_06063032.1| molybdopterin biosynthesis protein [Acinetobacter johnsonii SH046]
 gi|262315772|gb|EEY96811.1| molybdopterin biosynthesis protein [Acinetobacter johnsonii SH046]
          Length = 339

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 63/161 (39%), Gaps = 17/161 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C        +K  +LS ++      ++ +   I ++  TGG+PL+  
Sbjct: 23  ISVTDRCNFKCVYCMPEHPEWMKKHDLLSFEELYHFCKFMVQH-GIEQIRITGGEPLM-- 79

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAI------ 211
            + +   ++ L+ +K   + R      +        +    LK+AG   + I++      
Sbjct: 80  RQGVVHFIEQLQSLKKQGLKRIS----MTTNGHYLKQYAAALKQAGLDDLNISLDSLDAE 135

Query: 212 HANH--PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
              H    +     +  I      G  +   +VL+KGINDD
Sbjct: 136 QFQHLTKKQLHT-VLEGIQVAQQVGFNIKINTVLMKGINDD 175


>gi|239637612|ref|ZP_04678584.1| conserved hypothetical protein [Staphylococcus warneri L37603]
 gi|239596830|gb|EEQ79355.1| conserved hypothetical protein [Staphylococcus warneri L37603]
          Length = 448

 Score = 45.5 bits (107), Expect = 0.013,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   +   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATTLV--NAGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  +  ++ +R  S    ++  ++  E+I  L+ + K 
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDQVDGLERIRISS----IEASQLTDEVIDVLERSNK- 250

Query: 207 VYIAIHA 213
           +   +H 
Sbjct: 251 IVRHLHV 257


>gi|330686099|gb|EGG97720.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU121]
          Length = 448

 Score = 45.5 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   +   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATTLV--NAGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  +  ++ +R  S    ++  ++  E+I  L+ + K 
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDQVDGLERIRISS----IEASQLTDEVIDVLERSNK- 250

Query: 207 VYIAIHA 213
           +   +H 
Sbjct: 251 IVRHLHV 257


>gi|89895872|ref|YP_519359.1| hypothetical protein DSY3126 [Desulfitobacterium hafniense Y51]
 gi|89335320|dbj|BAE84915.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 441

 Score = 45.5 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 50/139 (35%), Gaps = 25/139 (17%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA----ALAYIQEK 141
           L  I      R  LK+   C  +C +C      G  +  +  +  TEA    A  Y    
Sbjct: 144 LPLIEEESRTRATLKIQEGCNQFCTYCIIPYARGPVRSRIPENAVTEAEKLVAAGY---- 199

Query: 142 SQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
               E++ T       G D  +     L +++K L  IK +  LR  S    ++P    P
Sbjct: 200 ---KEIVLTGIHTGSYGED--LGEDWDLARLVKALAQIKGLHRLRLSS----IEPMEFTP 250

Query: 195 ELIQCLKEAGKPVYIAIHA 213
           ELI  +      V   +H 
Sbjct: 251 ELIDVIINYP-AVCPHLHI 268


>gi|163942456|ref|YP_001647340.1| molybdenum cofactor biosynthesis protein A [Bacillus
           weihenstephanensis KBAB4]
 gi|163864653|gb|ABY45712.1| molybdenum cofactor biosynthesis protein A [Bacillus
           weihenstephanensis KBAB4]
          Length = 337

 Score = 45.5 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C + C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K+++ L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LAKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 175


>gi|219670301|ref|YP_002460736.1| RNA modification enzyme, MiaB family [Desulfitobacterium hafniense
           DCB-2]
 gi|219540561|gb|ACL22300.1| RNA modification enzyme, MiaB family [Desulfitobacterium hafniense
           DCB-2]
          Length = 439

 Score = 45.5 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 50/139 (35%), Gaps = 25/139 (17%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA----ALAYIQEK 141
           L  I      R  LK+   C  +C +C      G  +  +  +  TEA    A  Y    
Sbjct: 142 LPLIEEESRTRATLKIQEGCNQFCTYCIIPYARGPVRSRIPENAVTEAEKLVAAGY---- 197

Query: 142 SQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
               E++ T       G D  +     L +++K L  IK +  LR  S    ++P    P
Sbjct: 198 ---KEIVLTGIHTGSYGED--LGEDWDLARLVKALAQIKGLHRLRLSS----IEPMEFTP 248

Query: 195 ELIQCLKEAGKPVYIAIHA 213
           ELI  +      V   +H 
Sbjct: 249 ELIDVIINYP-AVCPHLHI 266


>gi|296133939|ref|YP_003641186.1| RNA modification enzyme, MiaB family [Thermincola sp. JR]
 gi|296032517|gb|ADG83285.1| RNA modification enzyme, MiaB family [Thermincola potens JR]
          Length = 445

 Score = 45.5 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 17/145 (11%)

Query: 75  EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD--TE 132
           +D +       L  + +    R  LK+   C  +C +C    +  ++       +D    
Sbjct: 123 KDIMQAREFEELPVLDYESRTRAFLKIQEGCNNFCTYCI---IPYARGPVRSRKRDNVIT 179

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIV 187
            A   + E     E++ TG         R     L  ++  L  IK ++ LR  S    V
Sbjct: 180 EAERLVGE--GFREIVLTGIHIGAYGRDRDDGYDLAALVADLARIKGLRRLRLGS----V 233

Query: 188 DPQRINPELIQCLKEAGKPVYIAIH 212
           +P+ + P LI  + +    +   +H
Sbjct: 234 EPEDVTPHLIATMADNRV-ICRHLH 257


>gi|242242851|ref|ZP_04797296.1| 2-methylthioadenine synthase [Staphylococcus epidermidis W23144]
 gi|242233693|gb|EES36005.1| 2-methylthioadenine synthase [Staphylococcus epidermidis W23144]
          Length = 451

 Score = 45.5 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 201

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  I+ ++ +R  S    ++  ++  E+I  +  + K 
Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 253

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 254 VVRHLHI 260


>gi|30263518|ref|NP_845895.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Ames]
 gi|47528911|ref|YP_020260.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49186368|ref|YP_029620.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Sterne]
 gi|65320845|ref|ZP_00393804.1| COG2896: Molybdenum cofactor biosynthesis enzyme [Bacillus
           anthracis str. A2012]
 gi|165871039|ref|ZP_02215690.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0488]
 gi|167636277|ref|ZP_02394579.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0442]
 gi|167640544|ref|ZP_02398806.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0193]
 gi|170688439|ref|ZP_02879647.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0465]
 gi|170708165|ref|ZP_02898612.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0389]
 gi|177652522|ref|ZP_02934989.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0174]
 gi|190564908|ref|ZP_03017829.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis
           Tsiankovskii-I]
 gi|227813602|ref|YP_002813611.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           CDC 684]
 gi|229603477|ref|YP_002867763.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0248]
 gi|254686135|ref|ZP_05149994.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           CNEVA-9066]
 gi|254723532|ref|ZP_05185320.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A1055]
 gi|254738607|ref|ZP_05196310.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Western North America USA6153]
 gi|254744833|ref|ZP_05202511.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Kruger B]
 gi|254752925|ref|ZP_05204961.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Vollum]
 gi|254759197|ref|ZP_05211223.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Australia 94]
 gi|254811535|sp|C3LA56|MOAA_BACAC RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|30258153|gb|AAP27381.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Ames]
 gi|47504059|gb|AAT32735.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49180295|gb|AAT55671.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Sterne]
 gi|164713250|gb|EDR18776.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0488]
 gi|167511412|gb|EDR86796.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0193]
 gi|167528300|gb|EDR91072.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0442]
 gi|170126973|gb|EDS95853.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0389]
 gi|170667609|gb|EDT18364.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0465]
 gi|172082196|gb|EDT67263.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0174]
 gi|190564225|gb|EDV18189.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis
           Tsiankovskii-I]
 gi|227006379|gb|ACP16122.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           CDC 684]
 gi|229267885|gb|ACQ49522.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0248]
          Length = 338

 Score = 45.5 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  +  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKVDGVEDI 99


>gi|251810993|ref|ZP_04825466.1| 2-methylthioadenine synthase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|293366463|ref|ZP_06613140.1| Fe-S oxidoreductase [Staphylococcus epidermidis M23864:W2(grey)]
 gi|251805503|gb|EES58160.1| 2-methylthioadenine synthase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|291319232|gb|EFE59601.1| Fe-S oxidoreductase [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 451

 Score = 45.5 bits (107), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 201

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  I+ ++ +R  S    ++  ++  E+I  +  + K 
Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 253

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 254 VVRHLHI 260


>gi|295094897|emb|CBK83988.1| Fe-S oxidoreductase, related to NifB/MoaA family [Coprococcus sp.
           ART55/1]
          Length = 436

 Score = 45.1 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 38/162 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +     + T+    D ++ L+++Q       +  T      +
Sbjct: 80  LMDNYKSCYNKCIFCFIDQNPKGMRDTIYFKDD-DSRLSFLQGN----YITLT-----NM 129

Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
             K + +++   L  I     +  H+  P              L+ +             
Sbjct: 130 KEKDIDRIINYHLAPI----NISVHTTNP-------------KLRCSMLN---------- 162

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
             F+   +  I +   AGI +  Q VL KGIND  E+   + 
Sbjct: 163 NRFAGAILDYIRKFYEAGIPMNGQIVLCKGINDGEELWRTIS 204


>gi|294013183|ref|YP_003546643.1| putative radical SAM [Sphingobium japonicum UT26S]
 gi|292676513|dbj|BAI98031.1| putative radical SAM [Sphingobium japonicum UT26S]
          Length = 382

 Score = 45.1 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 8/96 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREM---VGSQKGTVLSSKDTEAALAYIQEKSQIW----EV 147
           D +LLK+   C + C +C+   M       +   +S    +A    + ++  +      V
Sbjct: 12  DTVLLKVASRCNLDCSYCYVYHMGDNAWRDQPKQMSDAVLDAVARRLADQYALQAVPFSV 71

Query: 148 IFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHS 182
           +  GG+PL+L   +L++    LR  + H   +   +
Sbjct: 72  VLHGGEPLLLGVAKLERFCAKLRDALPHPCGIHIQT 107


>gi|260589077|ref|ZP_05854990.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
 gi|331082507|ref|ZP_08331632.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540497|gb|EEX21066.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
 gi|330400485|gb|EGG80115.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 434

 Score = 45.1 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 21/127 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C     V  +  +    +  E  L     K+   E + TG  
Sbjct: 143 HTRAYLKVQDGCNQFCSYCII-PYVRGRVRSRRKEEVLEEVLR--LTKNGYQEFVLTGIH 199

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D        L +++K +  I+ V+ +R  S    ++P+ I  E  Q L    K 
Sbjct: 200 LSSYGVDC----EDNLLELIKAVHEIEGVKRIRLGS----LEPRIITEEFAQALGNMPK- 250

Query: 207 VYIAIHA 213
             I  H 
Sbjct: 251 --ICPHF 255


>gi|117924506|ref|YP_865123.1| nitrogenase cofactor biosynthesis protein NifB [Magnetococcus sp.
           MC-1]
 gi|117608262|gb|ABK43717.1| nitrogenase cofactor biosynthesis protein NifB [Magnetococcus sp.
           MC-1]
          Length = 464

 Score = 45.1 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 69/214 (32%), Gaps = 49/214 (22%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGS 120
           ++  P   +D              H+Y  R+ L +   C + C +C R+         G 
Sbjct: 14  VDTHPCFSKDA------------HHKYA-RMHLAVAPACNIQCNYCNRKYDCANESRPGV 60

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILR 179
               +   +  E   A   +  Q+  V   G GDPL    +  +   +       +Q+  
Sbjct: 61  VSELLTPQQAVEKVRAVKAKIPQLTVVGIAGPGDPLANPARTFETCERIAAEFPELQLC- 119

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--------------HANHPYEFSEEAIA 225
             +      PQ +  E I+ L      + I                H N       +  A
Sbjct: 120 LSTNGL-TLPQHV--ERIKALNVHHVTITINALDPEVGAKVYPWIFHNN--RRIRGKKAA 174

Query: 226 AI---------SRLANAGIILLSQSVLLKGINDD 250
           AI           L   G+++   SV++ G+N+D
Sbjct: 175 AILIRNQFKGLEMLVERGVLVKVNSVMIPGMNED 208


>gi|295707098|ref|YP_003600173.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium DSM
           319]
 gi|294804757|gb|ADF41823.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium DSM
           319]
          Length = 338

 Score = 45.1 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 8/89 (8%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           L +   C   CR+C   E+ G+         +LS  + E           + +V  TGG+
Sbjct: 18  LSVTDRCNFRCRYCMPEEIFGADYPFLPAENILSFDELERLTRLFAS-LGVKKVRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           PL+   K L  ++  L+ I+ +  +   +
Sbjct: 77  PLL--RKGLPDLINRLKQIEGIDDIAITT 103


>gi|189425003|ref|YP_001952180.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189421262|gb|ACD95660.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 374

 Score = 45.1 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 28/160 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKS-QIWEVIFTGGDPLI 156
                 CP  C FC +  M+   + +V S++   E    ++     +  EV F GG    
Sbjct: 9   FIPHAGCPHTCLFCNQ-HMISGAQQSVPSARQISETVQQWLGRSPNRAAEVAFYGG-SFT 66

Query: 157 LSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
           L  ++    L + ++ L   + ++ +R  +R     P  ++  ++  L            
Sbjct: 67  LLPRKQQEQLLEAVQPLLEQQKIRNIRISTR-----PDALDEAVLAFLAGHKVTTIEVGV 121

Query: 209 ------IAIHAN--HPYEFSEEAIAAISRLANAGIILLSQ 240
                 + + +N  H    + +++AAI R+ +AG  + +Q
Sbjct: 122 QSLDDLVLLQSNRGHT---AADSMAAIQRVRSAGFQVGAQ 158


>gi|27468181|ref|NP_764818.1| hypothetical protein SE1263 [Staphylococcus epidermidis ATCC 12228]
 gi|57867026|ref|YP_188720.1| hypothetical protein SERP1144 [Staphylococcus epidermidis RP62A]
 gi|282875998|ref|ZP_06284865.1| MiaB-like protein [Staphylococcus epidermidis SK135]
 gi|27315727|gb|AAO04862.1|AE016748_96 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57637684|gb|AAW54472.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A]
 gi|281295023|gb|EFA87550.1| MiaB-like protein [Staphylococcus epidermidis SK135]
 gi|329735363|gb|EGG71655.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU045]
 gi|329737126|gb|EGG73380.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU028]
          Length = 448

 Score = 45.1 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  I+ ++ +R  S    ++  ++  E+I  +  + K 
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|222151807|ref|YP_002560965.1| coproporphyrinogen III oxidase [Macrococcus caseolyticus JCSC5402]
 gi|222120934|dbj|BAH18269.1| coproporphyrinogen III oxidase [Macrococcus caseolyticus JCSC5402]
          Length = 489

 Score = 45.1 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 59/168 (35%), Gaps = 20/168 (11%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--- 129
           E  D I     + L  +     +  +   +  CP  C +C             +      
Sbjct: 139 ELMDRITKTQLNALPDLYELEQEVSIYIGIPFCPTKCAYCTFPAYAIQVHKNDVPEFLVG 198

Query: 130 ---DTEAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLR---YIKHVQILRFHS 182
              + E    +++    ++  + F GG P  +S + L+ +L+ +     + HV+ L    
Sbjct: 199 LLYEIEHIGEWLKAHDIKVTSIYFGGGTPTSISAQDLKLLLEAVYTHFDMTHVRELT--- 255

Query: 183 RVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
            V    P  I+   ++ L       + I      P  F++E + AI R
Sbjct: 256 -VEAGRPDTIDEATLEVLNSFDINRISIN-----PQSFTDETLKAIGR 297


>gi|42782634|ref|NP_979881.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           10987]
 gi|42738560|gb|AAS42489.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           10987]
          Length = 338

 Score = 45.1 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   E+ G          +LS  + E     I     + ++  TGG+
Sbjct: 18  ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ L  I  V+ +
Sbjct: 77  PLL--RRGLPQLIERLNKINGVEDI 99


>gi|326942510|gb|AEA18406.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 337

 Score = 45.1 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E  LA +     + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LAKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIDDDIFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 175


>gi|166031237|ref|ZP_02234066.1| hypothetical protein DORFOR_00924 [Dorea formicigenerans ATCC
           27755]
 gi|166029084|gb|EDR47841.1| hypothetical protein DORFOR_00924 [Dorea formicigenerans ATCC
           27755]
          Length = 428

 Score = 45.1 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 57/147 (38%), Gaps = 19/147 (12%)

Query: 73  EREDPIGDNNHSPLKGIVH-RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
           E  D   +  +  ++ + H     R  +K+   C  +C +C     +       + S++ 
Sbjct: 121 ELLDINHEKEYEEMQ-VTHTAEHTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRNL 174

Query: 132 EAALAYIQ--EKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           E  L  ++    S   EV+ TG       I + + L ++++ +  I  ++ +R  S    
Sbjct: 175 EHVLEEVRTLAASGYKEVVLTGIHLSSYGIDTGESLLELIQKVHEIDGIKRIRLGS---- 230

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHA 213
           ++P+ I  E    +    K   +  H 
Sbjct: 231 LEPRIITEEFASSIAALPK---MCPHF 254


>gi|87310113|ref|ZP_01092245.1| probable MiaB protein-putative tRNA-thiotransferase
           [Blastopirellula marina DSM 3645]
 gi|87287103|gb|EAQ79005.1| probable MiaB protein-putative tRNA-thiotransferase
           [Blastopirellula marina DSM 3645]
          Length = 475

 Score = 45.1 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 21/141 (14%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
            E  DP+ D    P          +  +++   C  +C +C    + G ++G     +D 
Sbjct: 143 HESFDPLRDPEMRPTPF-------QAYVRIQIGCDKFCTYCIVPSVRGPEQGRRP--EDI 193

Query: 132 EAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            A   ++ ++  +   +         G D    S   L  +L  +  I  ++ +    + 
Sbjct: 194 LAETRHLADQGTVEITLVGQTVNSYRGQDAAGKSW-NLADLLAAIHEIDGIRRI----KF 248

Query: 185 PIVDPQRINPELIQCLKEAGK 205
               P+ +  EL+  ++E  K
Sbjct: 249 VTNYPKDMTDELLTAVRELDK 269


>gi|24212660|sp|O57854|MOAA_PYRHO RecName: Full=Probable molybdenum cofactor biosynthesis protein A
          Length = 310

 Score = 45.1 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 69/177 (38%), Gaps = 38/177 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + L   C + C +C R   +       ++ ++ E  +  +  +  I +V  TGG+P I  
Sbjct: 15  ISLTKECNLSCFYCHREGQL--DGERFMTPEEIERIVR-VASRLGIKKVKLTGGEPTIRK 71

Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG----------- 204
              + ++++ L+   +V  L      + + +         L + LKEAG           
Sbjct: 72  D--ILEIIRRLK--PYVVDLSLTTNGTTMYV---------LAEKLKEAGLDRVNISLDTL 118

Query: 205 --KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
             K   +    N      +E I  I +       +    V++KG+NDD   + ++MR
Sbjct: 119 DRKKYKMITGFN----VLDEVIKGIKKATKLFYPVKLNMVVMKGVNDD--EIWDMMR 169


>gi|188586121|ref|YP_001917666.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|229890572|sp|B2A3X6|MIAB_NATTJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|179350808|gb|ACB85078.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 451

 Score = 45.1 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 23/163 (14%)

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFCFRREMV 118
            PQ  E  +   +R   I  ++    + + H+  D  +  + + + C  YC++C    + 
Sbjct: 119 FPQLLEHVMQKGKRVKEISQDDSQVFENLPHKREDSIKAWVVISYGCDNYCKYCIVPYVR 178

Query: 119 GSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLR 170
           G Q+         + E        K  + E+   G + +    K L +      +L+ L 
Sbjct: 179 GQQRSRDPEHIKYEVEKL-----AKEGLKEITLLGQN-VNSYGKDLDQNISFTNLLEELS 232

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
            I+ ++ +RF +      P+  + ELI  LKE+ K   I  H 
Sbjct: 233 KIEGIERIRFMTSH----PKDFDKELITTLKESNK---ICEHF 268


>gi|189346211|ref|YP_001942740.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium limicola
           DSM 245]
 gi|189340358|gb|ACD89761.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium limicola
           DSM 245]
          Length = 424

 Score = 45.1 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 75/212 (35%), Gaps = 45/212 (21%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE----KSQIWEVI 148
            RI L +   C + C +C R+    ++    ++SK      AL Y+Q+       I  V 
Sbjct: 20  GRIHLPVAPKCNIQCNYCSRKFDCMNENRPGVTSKVLSPRQALYYLQQAMEISPNIAVVG 79

Query: 149 FTG-GDPLILSHKRLQKV------------------LKTLRYIK--------HVQILRFH 181
             G GDP     + ++ +                  L  + +I         HV  +  +
Sbjct: 80  IAGPGDPFANPDETMETLRLVREHYPEMLLCVATNGLDLMPWIDELAELQVSHV-TITIN 138

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
                +DP+ +  E+   ++   K   +              + A+ RL   G+     S
Sbjct: 139 ----AIDPE-VGSEIYAWVRHKKK---MYRDIEAAKLLIGNQLEALKRLKEVGVTAKVNS 190

Query: 242 VLLKGINDD--PEILANLMRTFVEL-RIKPYY 270
           +++ GIND    ++   +     ++    PYY
Sbjct: 191 IIIPGINDGHVIDVARKVSELGADILNCLPYY 222


>gi|224418140|ref|ZP_03656146.1| 2-methylthioadenine synthetase [Helicobacter canadensis MIT
           98-5491]
 gi|253827467|ref|ZP_04870352.1| 2-methylthioadenine synthetase [Helicobacter canadensis MIT
           98-5491]
 gi|313141675|ref|ZP_07803868.1| tRNA modifying enzyme [Helicobacter canadensis MIT 98-5491]
 gi|253510873|gb|EES89532.1| 2-methylthioadenine synthetase [Helicobacter canadensis MIT
           98-5491]
 gi|313130706|gb|EFR48323.1| tRNA modifying enzyme [Helicobacter canadensis MIT 98-5491]
          Length = 423

 Score = 45.1 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 14/123 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C    + G  K            +  + +     E I TG +
Sbjct: 133 KSRAFIKIQEGCDFACSYCIIPSVRG--KARSFEKNKIINQITKLTQN-GFSEFILTGTN 189

Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK----EAGKP 206
                  S++ L  +L+++  I  V+ LR  S    ++P +I  + +  L     E    
Sbjct: 190 MGSWGKDSNENLTSLLESICAIPEVKRLRLGS----LEPSQITQDFLDFLDHPKIERHLH 245

Query: 207 VYI 209
           + +
Sbjct: 246 IAL 248


>gi|220929547|ref|YP_002506456.1| hypothetical protein Ccel_2132 [Clostridium cellulolyticum H10]
 gi|219999875|gb|ACL76476.1| protein of unknown function DUF512 [Clostridium cellulolyticum H10]
          Length = 438

 Score = 45.1 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 83/246 (33%)

Query: 41  PVIAN----LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96
                    L+    P+  I         E+ +  +E E+   +   S + G        
Sbjct: 42  RYYQASEELLLEIEKPDGEIW--------EIEVEKDENEELGLEFEDSLIDG-------- 85

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
                   C   C FCF  ++    + TV           Y ++      + F  G+ + 
Sbjct: 86  -----AKSCTNKCIFCFIDQLPKGMRETV-----------YFKDDDS--RLSFLTGNYVT 127

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           L++  ++K  + L  I H                R++            P+ +++H  +P
Sbjct: 128 LTN--IKK--EELERIIH---------------YRMS------------PINVSVHTTNP 156

Query: 217 --------YEFSEEAIAAISRLANAGIILLSQSVLLKGIND------DPEILANLMRTFV 262
                     F+ + +  I  L + GI +  Q VL + IND        ++L+ L  +  
Sbjct: 157 DLRKFMLGNRFAGDVMNKIRMLTDNGIEVNCQIVLCRDINDGNELDKTIDVLSELYPSIN 216

Query: 263 ELRIKP 268
            + I P
Sbjct: 217 SVSIVP 222


>gi|257467388|ref|ZP_05631699.1| Fe-S oxidoreductase [Fusobacterium gonidiaformans ATCC 25563]
 gi|315918518|ref|ZP_07914758.1| Fe-S oxidoreductase [Fusobacterium gonidiaformans ATCC 25563]
 gi|313692393|gb|EFS29228.1| Fe-S oxidoreductase [Fusobacterium gonidiaformans ATCC 25563]
          Length = 436

 Score = 45.1 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 20/139 (14%), Positives = 47/139 (33%), Gaps = 13/139 (9%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152
            R  +K+   C  +C +C      G  +        ++ +  L  ++   +I  +    G
Sbjct: 145 TRAYVKIQDGCNEFCSYCKIPFARGKSRSRKQEKVLEEIDKLL--MEGFQEIILIGINLG 202

Query: 153 DPL--ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           D    +      + +++ +     ++ +R  S    V P RI    I   K     +   
Sbjct: 203 DYGKDLEGDTSFETLVQEILKRDSLKRVRIGS----VYPDRITDSFISLFKNP--KMMPH 256

Query: 211 IHANHPYEFSEEAIAAISR 229
           +H +      +  +  + R
Sbjct: 257 LHIS-LQSCDDTVLRNMKR 274


>gi|317063767|ref|ZP_07928252.1| thiamine biosynthesis protein ThiH [Fusobacterium ulcerans ATCC
           49185]
 gi|313689443|gb|EFS26278.1| thiamine biosynthesis protein ThiH [Fusobacterium ulcerans ATCC
           49185]
          Length = 474

 Score = 45.1 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 15/149 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +          L+ ++    +  +++       +  G DPL  S
Sbjct: 92  LYVSNYCVNNCEYCGYKHDNDELSRKKLNREELIEEVKSLEKLGHKRIALEAGEDPLNCS 151

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE------------AGKP 206
              L  +L+ ++ I  ++      R   V+      E  + LKE              KP
Sbjct: 152 ---LDYILECIKDIYSIKFKNGSIRRINVNIAATTVENYKRLKEAEIGTYILFQETYHKP 208

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI 235
            Y  +H N P    E    A+ R   AGI
Sbjct: 209 TYERVHLNGPKRDYEYHTTAMFRAREAGI 237


>gi|56419300|ref|YP_146618.1| hypothetical protein GK0765 [Geobacillus kaustophilus HTA426]
 gi|56379142|dbj|BAD75050.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 372

 Score = 45.1 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 67/180 (37%), Gaps = 24/180 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ +L   C + C  C R E    +    L+ ++ +  +  I E  Q   ++FTGGD
Sbjct: 8   PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYEMDQPM-LVFTGGD 65

Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
           PL+      L K       I   + LR  S  P   P  +  E I+  KE G   +    
Sbjct: 66  PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLSRWAFSL 116

Query: 209 ------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMRTF 261
                 I  H        +  I AI  L    I +   +V+ +  N    + +A L+   
Sbjct: 117 DGPNAEIHDHFRGVSGSFDLTIRAIHYLHELDIPVQINTVISRY-NVHVLDEMAELVEKL 175


>gi|291301726|ref|YP_003513004.1| MiaB-like tRNA modifying enzyme YliG [Stackebrandtia nassauensis
           DSM 44728]
 gi|290570946|gb|ADD43911.1| MiaB-like tRNA modifying enzyme YliG [Stackebrandtia nassauensis
           DSM 44728]
          Length = 479

 Score = 45.1 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 67/210 (31%), Gaps = 41/210 (19%)

Query: 47  INPHNPNDPIARQFIP-----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR----- 96
           I  H P D   R  +P     ++E   ++P        D + + +    H    R     
Sbjct: 126 IASHTPTD--RRTLLPISPVKRREATAVIPGHAA---PDTDDTAMP--AHLKVMRRRLTS 178

Query: 97  ---ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
                LK+   C   C FC    FR   V    G +L+     A    ++          
Sbjct: 179 GPVANLKIASGCDRRCAFCAIPSFRGAFVSRDPGEILAEAQWLAEQGVVEVTLVSENTTS 238

Query: 150 TGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVD-PQRINPELIQCLKEA-GKP 206
            G D   LS    L+K+L  L  +  ++ +R          P  + P L++ +    G  
Sbjct: 239 YGKD---LSDAAALEKLLPQLAAVDGIERVR-----VSYLQPAELRPSLVETIATTPGVA 290

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGII 236
            Y  +   H       +   + R+   G  
Sbjct: 291 PYFDLSFQH------SSRDLLRRMRRFGST 314


>gi|261409709|ref|YP_003245950.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
           Y412MC10]
 gi|261286172|gb|ACX68143.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp.
           Y412MC10]
          Length = 334

 Score = 45.1 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 25/175 (14%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E M       ++S ++  + +  +     + +
Sbjct: 10  GRVHDY---IRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIASIMRVLAPM-GVSK 65

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           V  TGG+PL+     L+ ++  +  I+ VQ +   +         + P   + LKEAG  
Sbjct: 66  VRLTGGEPLVRKD--LETLVHQIASIEGVQDISLTTNGI------MLPSKARLLKEAGLT 117

Query: 207 VYIAIHANHPYE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
             I I  +   E      +      + +  I     AG+  +    VL+KG N+D
Sbjct: 118 -RINISLDSLQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNED 171


>gi|304382742|ref|ZP_07365233.1| possible arylsulfatase regulator [Prevotella marshii DSM 16973]
 gi|327313870|ref|YP_004329307.1| radical SAM domain-containing protein [Prevotella denticola F0289]
 gi|304336137|gb|EFM02382.1| possible arylsulfatase regulator [Prevotella marshii DSM 16973]
 gi|326944612|gb|AEA20497.1| radical SAM domain protein [Prevotella denticola F0289]
          Length = 451

 Score = 45.1 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/150 (15%), Positives = 57/150 (38%), Gaps = 23/150 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156
           +     C   C +CF      +++   +S    E  + +I+    +  +  T  GG+PL+
Sbjct: 107 IAPTSDCNFNCPYCFEE----NKRPIRMSDAVIENIILFIKRYKHLEYLYITWYGGEPLM 162

Query: 157 LSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHAN 214
                ++K+L  +   I +++         + +   IN +++    +     + I +  N
Sbjct: 163 AID-IIEKILNRISIEIPNIK---ISHHFLVTNGYLINEKMLSLFSKYPLNSIQITLDGN 218

Query: 215 HPYEFSEEAIAAISRLANAGI-----ILLS 239
            P          + +L  +G+     I+ +
Sbjct: 219 KPR------HDNLRKLKKSGLGTFDKIVRN 242


>gi|163816750|ref|ZP_02208113.1| hypothetical protein COPEUT_02940 [Coprococcus eutactus ATCC 27759]
 gi|158448007|gb|EDP25002.1| hypothetical protein COPEUT_02940 [Coprococcus eutactus ATCC 27759]
          Length = 450

 Score = 45.1 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 21/152 (13%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
           E   D   +  +  + G V     R  +K+   C  +C +C     +       + S+  
Sbjct: 134 EYFIDISKETEYEEMGGHVPVGHTRAYVKIQDGCNQFCSYC-----IIPYVRGRIRSRSE 188

Query: 132 EAALAYIQEKSQ--IWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           EA +A + E ++  I EV+ TG        D    +   L  ++  +  IK ++ +R  S
Sbjct: 189 EAVIAEVTELAESGIKEVVLTGIHISSYGKD--KNNEGALIDLIDAISKIKGIKRIRLGS 246

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
               ++P  I  + ++ +  A K V    H +
Sbjct: 247 ----LEPGIITEDFVRRVS-ANKKVCPHFHLS 273


>gi|311029133|ref|ZP_07707223.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
           [Bacillus sp. m3-13]
          Length = 374

 Score = 45.1 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L     E  +  ++E  ++  +  TGG+P +
Sbjct: 33  VEFTTTTLCNMRCEHCAVGYTLQPKDPKALP---IELLIQRLEEIPRLRSISITGGEP-M 88

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           +S K + + +  L    H + +R           +IN  L   L    K  P    +H +
Sbjct: 89  MSMKSVNEYVVPLLKYAHERGVR----------TQINSNLTLDLARYEKIIPYLDVLHIS 138

Query: 215 H 215
           H
Sbjct: 139 H 139


>gi|229132987|ref|ZP_04261829.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-ST196]
 gi|228650484|gb|EEL06477.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-ST196]
          Length = 337

 Score = 45.1 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LPKLIARLTKLEGLKDIGLTTNGIHLAKQ------ARALKEAGLKRVNISLD 128

Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
               H     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDHVFRKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175


>gi|14590060|ref|NP_142124.1| molybdenum cofactor biosynthesis protein A [Pyrococcus horikoshii
           OT3]
 gi|3256500|dbj|BAA29183.1| 316aa long hypothetical molybdenum cofactor biosynthesis protein
           [Pyrococcus horikoshii OT3]
          Length = 316

 Score = 45.1 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 69/177 (38%), Gaps = 38/177 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + L   C + C +C R   +       ++ ++ E  +  +  +  I +V  TGG+P I  
Sbjct: 21  ISLTKECNLSCFYCHREGQL--DGERFMTPEEIERIVR-VASRLGIKKVKLTGGEPTIRK 77

Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG----------- 204
              + ++++ L+   +V  L      + + +         L + LKEAG           
Sbjct: 78  D--ILEIIRRLK--PYVVDLSLTTNGTTMYV---------LAEKLKEAGLDRVNISLDTL 124

Query: 205 --KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
             K   +    N      +E I  I +       +    V++KG+NDD   + ++MR
Sbjct: 125 DRKKYKMITGFN----VLDEVIKGIKKATKLFYPVKLNMVVMKGVNDD--EIWDMMR 175


>gi|257440231|ref|ZP_05615986.1| RNA modification enzyme, MiaB family [Faecalibacterium prausnitzii
           A2-165]
 gi|257197265|gb|EEU95549.1| RNA modification enzyme, MiaB family [Faecalibacterium prausnitzii
           A2-165]
          Length = 441

 Score = 45.1 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 35/172 (20%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
             LK+   C   C +C     R  +        ++     A          + E+I    
Sbjct: 146 AYLKIAEGCNNRCHYCAIPGIRGPLHSRDLADCVAEARWLAG-------EGVKELIVVAQ 198

Query: 153 DPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           DP            + ++L  L  +  ++ +R         P+RI  + I  +K   K V
Sbjct: 199 DPTAYGEDWGKPGSICELLDKLNKVPGLEWIRI----MYAYPERITDDFIAAMKRNEKVV 254

Query: 208 -YIAIHANHP----------YEFSEEAIAAISRLANA--GIILLSQSVLLKG 246
            Y+ +   H                E +  I +L     GI L   + L+ G
Sbjct: 255 PYLDLPIQHCNDTILKNMNRRSTRAELLEVIGKLRREIPGITLR--TTLIAG 304


>gi|328948729|ref|YP_004366066.1| RNA modification enzyme, MiaB family [Treponema succinifaciens DSM
           2489]
 gi|328449053|gb|AEB14769.1| RNA modification enzyme, MiaB family [Treponema succinifaciens DSM
           2489]
          Length = 482

 Score = 45.1 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 14/128 (10%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
              R  LK+   C   C FC R         ++   K  E A     E     E++ TG 
Sbjct: 175 KHSRATLKIQDGCNNSCSFC-RIHFARGTSVSLEPEKILERAKE--IENLGSSEIVLTGV 231

Query: 153 D----PLILSHKRL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +      +     +   + +L  L    + + ++F  R+    PQ I  EL   L +   
Sbjct: 232 NLSQYAGMSKDGAIFDFKDLLSFLLS--NTKKVKF--RISSFYPQHITKELCAVLSDKRV 287

Query: 206 PVYIAIHA 213
             +  +  
Sbjct: 288 QPFFHLSI 295


>gi|296129601|ref|YP_003636851.1| molybdenum cofactor biosynthesis protein A [Cellulomonas flavigena
           DSM 20109]
 gi|296021416|gb|ADG74652.1| molybdenum cofactor biosynthesis protein A [Cellulomonas flavigena
           DSM 20109]
          Length = 349

 Score = 45.1 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 32/187 (17%)

Query: 88  GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           G+V RY        + L   C + C +C   E +  +   TVL+  +    +    E   
Sbjct: 16  GLVDRYGRVATDLRVSLTDRCNLRCTYCMPAEGLPWAPDDTVLTDAEVVRLVRIGVEHLG 75

Query: 144 IWEVIFTGGDPLILSHKRLQKVLK---TLRYIK--HVQILRFHSRVPIVDPQRINPELIQ 198
           I EV FTGG+PL+   + L+ ++     LR     HV+           +      +  +
Sbjct: 76  IREVRFTGGEPLL--RRGLESIVAGTHALRTADGAHVRT------SLTTN-GLGLDKRAR 126

Query: 199 CLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLAN--AG---------IILLSQSVLLKG 246
            L EAG   V +++ +  P  F+        RLA+  AG           +   +VL++G
Sbjct: 127 SLAEAGLDRVNVSLDSLDPVRFATITRR--DRLADVLAGLAAASATGLAPVKVNAVLVRG 184

Query: 247 INDDPEI 253
           +NDD  +
Sbjct: 185 VNDDEAV 191


>gi|227874225|ref|ZP_03992425.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
           [Oribacterium sinus F0268]
 gi|227839933|gb|EEJ50363.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
           [Oribacterium sinus F0268]
          Length = 328

 Score = 45.1 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 22/174 (12%)

Query: 99  LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + +   C ++C++C     E        +   +  + A A +     I     TGG+PL+
Sbjct: 14  MSITDRCNLHCQYCMPNGLENPLPMDRLLTYEELLQVAKAAVAC--GITRFKVTGGEPLV 71

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIHA 213
                    + +L+ +  V+ +   +         +  E +   +E G     V +    
Sbjct: 72  RKGAV--DFMASLKALPGVEQVTITTNGL------LLSEALPRFQEMGLDGINVSLDTLI 123

Query: 214 -NHPYEFSE--EAIAAISRLANA---GIILLSQSVLLKGIN-DDPEILANLMRT 260
               YE +        +  +  A   GI +   +VL KG+N D+   L  L + 
Sbjct: 124 PERFYEITGFDALDKVLQGIKEAVVSGIPVKLNTVLQKGVNEDEIFALLALCKK 177


>gi|154248939|ref|YP_001409764.1| biotin synthase [Fervidobacterium nodosum Rt17-B1]
 gi|154152875|gb|ABS60107.1| Radical SAM domain protein [Fervidobacterium nodosum Rt17-B1]
          Length = 349

 Score = 45.1 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/115 (13%), Positives = 40/115 (34%), Gaps = 6/115 (5%)

Query: 74  REDPIGDNNHSPLKGIVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
             D   +        +  +Y       R +++  + C  +C +C  R    +     ++ 
Sbjct: 20  STDEHNEEIFKVADEVRRKYVGTEVHLRAIIEFSNYCSQHCLYCGLRAENRNLNRYRMTE 79

Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
           ++       I +      V+ +G DP   + +R+  ++  ++ +     L    R
Sbjct: 80  EEILERARLIAKLGIKTIVLQSGEDPYY-TTERISYLITEIKKLDVAITLSIGER 133


>gi|282849041|ref|ZP_06258430.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
 gi|282581316|gb|EFB86710.1| radical SAM domain protein [Veillonella parvula ATCC 17745]
          Length = 399

 Score = 45.1 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 30/167 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155
                 CP  C FC +  + G    + L+ +  +  +  Y+  +   + WEV F GG   
Sbjct: 10  FIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWEVAFYGG-SF 68

Query: 156 ILSHKRLQK-VLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
               K LQ  +L     I     +  +R  +R     P  +  E I  L+  G K V + 
Sbjct: 69  TAITKDLQHKLLMPAYEILQQGLIDGIRCSTR-----PDAVGDEAITLLQSYGVKTVELG 123

Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           + +            H  +   E + A++RL +  + +  Q  LL G
Sbjct: 124 VQSMNDGILVDAKRGHTAQ---EVVEAVTRLKHRDMTVGVQ--LLPG 165


>gi|237752883|ref|ZP_04583363.1| 2-methylthioadenine synthetase [Helicobacter winghamensis ATCC
           BAA-430]
 gi|229375150|gb|EEO25241.1| 2-methylthioadenine synthetase [Helicobacter winghamensis ATCC
           BAA-430]
          Length = 366

 Score = 45.1 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 53/131 (40%), Gaps = 16/131 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C    + G  K    S +     +  + +     E I TG +
Sbjct: 133 KSRAFIKIQEGCDFACSYCIIPSVRG--KARSFSQEKILKQVESLAQ-KGFSEFIITGTN 189

Query: 154 PLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--EAGKP 206
             + S  +     +  ++++L  I  ++ LR  S    ++P +I+   +  L+  +  + 
Sbjct: 190 --MGSWGKDFGLNIATLVESLCEIPLLKRLRIGS----LEPSQIDTHFLSVLENPKIERH 243

Query: 207 VYIAIHANHPY 217
           ++IA+    P 
Sbjct: 244 LHIALQHTSPK 254


>gi|255036824|ref|YP_003087445.1| molybdenum cofactor biosynthesis protein A [Dyadobacter fermentans
           DSM 18053]
 gi|254949580|gb|ACT94280.1| molybdenum cofactor biosynthesis protein A [Dyadobacter fermentans
           DSM 18053]
          Length = 330

 Score = 45.1 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 39/178 (21%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA--LAYIQE---KSQIWE 146
           R    + + L   C + C +C        +    + SK    A  +AY+     +  + +
Sbjct: 11  RKHTYLRISLTDKCNLRCTYCM-----PQEDMQFMPSKWLMQADEIAYLAGLFVEMGVEK 65

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           +  TGG+PL+       +++ TL  +         S     +   I  + I  LK AG  
Sbjct: 66  IRLTGGEPLVRKDA--GEIIATLGKLP-------ASLTLTTNAVHI-DQFIAELKSAG-- 113

Query: 207 VYIAIHANHP---------YEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
                  N            E +      + +  I  L   G ++    V+++G NDD
Sbjct: 114 ---VTSLNVSLDTLKEARFREITKRDHFSKTLDHIRLLLAEGFVVKLNMVVMRGTNDD 168


>gi|210610065|ref|ZP_03288244.1| hypothetical protein CLONEX_00430 [Clostridium nexile DSM 1787]
 gi|210152676|gb|EEA83682.1| hypothetical protein CLONEX_00430 [Clostridium nexile DSM 1787]
          Length = 430

 Score = 45.1 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 30/141 (21%)

Query: 90  VHRY----------PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
            H Y            R  +K+   C  +C +C         +    + +D    +  + 
Sbjct: 129 THEYEEMHLNKTAEHTRAYIKVQDGCNQFCTYCIIP--FARGRVRSRAKEDVVREVTELA 186

Query: 140 EKSQIWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
                 EV+ TG        D   L ++ L  ++  +  I+ ++ +R  S    ++P+ I
Sbjct: 187 AN-GYQEVVLTGIHLSSYGVD---LENENLLSLILAVNEIEGIKRIRLGS----LEPRII 238

Query: 193 NPELIQCLKEAGKPVYIAIHA 213
             + ++ +    K   +  H 
Sbjct: 239 TEDFVKTISGLEK---MCPHF 256


>gi|227542935|ref|ZP_03972984.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC
           51866]
 gi|227181157|gb|EEI62129.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC
           51866]
          Length = 413

 Score = 45.1 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 75/204 (36%), Gaps = 37/204 (18%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTG 151
            P  ++ ++   C + C+ C R +         L+ ++ +  L  +    + +  V+FTG
Sbjct: 17  KPFIVIWEVTRACALVCKHC-RADAQHEPHPDQLTMEEGKRLLDQLASYEKPYPLVVFTG 75

Query: 152 GDPLILSH-KRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-GKPVY 208
           GDP   S    L +    L   I         S  P V P ++ PE +  L+EA GK + 
Sbjct: 76  GDPFERSDLAELCQYGTDLGLSI---------SLSPSVTP-KVTPERLHELREAGGKAMS 125

Query: 209 IAIHANHPYEFSEEAIAAIS--------------RLANAGIILLSQSVLLKGINDDPEIL 254
           +++        + E   A                 +   G  L   S L KG   +    
Sbjct: 126 MSL-----DGATPETHDAFRGFSGTFDATLEKAPLINAEGYRLQINSTLTKG---NIHEA 177

Query: 255 ANLMRTFVELRIKPYYLHHPDLAA 278
             L++  +E++ K +Y+       
Sbjct: 178 PALLKRVIEMQAKMWYVFFLVPTG 201


>gi|15613914|ref|NP_242217.1| hypothetical protein BH1351 [Bacillus halodurans C-125]
 gi|10173967|dbj|BAB05070.1| BH1351 [Bacillus halodurans C-125]
          Length = 448

 Score = 45.1 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    +  + A   +Q      E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKEVIKQAEQLVQA--GYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L    L ++L+ L  +  ++ +R  S    ++  ++  E+I+ +  + K 
Sbjct: 199 TGGYGED---LKDYSLARLLEDLEQVNGLKRIRISS----IEASQLTDEVIEVIDRSTK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|150016017|ref|YP_001308271.1| hypothetical protein Cbei_1133 [Clostridium beijerinckii NCIMB
           8052]
 gi|149902482|gb|ABR33315.1| protein of unknown function DUF512 [Clostridium beijerinckii NCIMB
           8052]
          Length = 444

 Score = 45.1 bits (106), Expect = 0.017,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 66/171 (38%), Gaps = 42/171 (24%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C   C FCF  ++    + T+    D ++ L+++Q       V  T      +  + + 
Sbjct: 86  SCSNKCIFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FVTLT-----NMKDEDID 135

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
           +++K   +I  +  +  H+     +P+      +Q L                  F+   
Sbjct: 136 RIIK--YHISPIN-ISVHT----TNPEL----RVQMLN---------------NRFAGNV 169

Query: 224 IAAISRLANAGIILLSQSVLLKGIND------DPEILANLMRTFVELRIKP 268
           +  + RLA+AGI + +Q V + GIN+        E L  L     ++ + P
Sbjct: 170 LERMQRLADAGITMNAQIVCVPGINNGNELKRTIEDLYKLYPEVSDVAVVP 220


>gi|257469523|ref|ZP_05633615.1| thiamine biosynthesis protein ThiH [Fusobacterium ulcerans ATCC
           49185]
          Length = 469

 Score = 45.1 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 15/149 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +          L+ ++    +  +++       +  G DPL  S
Sbjct: 87  LYVSNYCVNNCEYCGYKHDNDELSRKKLNREELIEEVKSLEKLGHKRIALEAGEDPLNCS 146

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE------------AGKP 206
              L  +L+ ++ I  ++      R   V+      E  + LKE              KP
Sbjct: 147 ---LDYILECIKDIYSIKFKNGSIRRINVNIAATTVENYKRLKEAEIGTYILFQETYHKP 203

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI 235
            Y  +H N P    E    A+ R   AGI
Sbjct: 204 TYERVHLNGPKRDYEYHTTAMFRAREAGI 232


>gi|39995358|ref|NP_951309.1| BchE/P-methylase family protein [Geobacter sulfurreducens PCA]
 gi|39982120|gb|AAR33582.1| BchE/P-methylase family protein [Geobacter sulfurreducens PCA]
          Length = 428

 Score = 45.1 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 35/193 (18%)

Query: 55  PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           P+ R  +P  +E+   P  R + +             RY     ++    CP  C FC  
Sbjct: 132 PVYRAPVPT-DEILSAPWPRREILA----------GRRYLTTQTVQASRGCPYDCSFCT- 179

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
              V    G     +D +  LA I+      +++    D L+    + + +L+ L  +  
Sbjct: 180 ---VTPYFGRTFRYRDPDDILAEIRSFR--RKLVVFLDDNLLGDPAKARPILRGLAEM-- 232

Query: 175 VQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIA-------IHANHPYEFSEEA-I 224
              +R+ S+  +    R   +PEL++ + ++G              HAN     +  +  
Sbjct: 233 --NVRWGSQTNL----RFAEDPELLKLVADSGCIGLFVGIESVTGAHANMAKSGTRYSQA 286

Query: 225 AAISRLANAGIIL 237
             + R+ +AGIIL
Sbjct: 287 DLMKRVRDAGIIL 299


>gi|38233743|ref|NP_939510.1| putative coenzyme PQQ synthesis related protein [Corynebacterium
           diphtheriae NCTC 13129]
 gi|38200004|emb|CAE49673.1| Putative coenzyme PQQ synthesis related protein [Corynebacterium
           diphtheriae]
          Length = 399

 Score = 45.1 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 41/230 (17%), Positives = 81/230 (35%), Gaps = 43/230 (18%)

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
           +P    D         ++G ++  P   + ++   C + C+ C R +         L+++
Sbjct: 1   MPHTSSDVADFKEVRHIRGDINLKPFIAIWEVTRACGLVCQHC-RADAQHEPHPEQLTTE 59

Query: 130 DTEAALAYIQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---- 184
             +  L+ +    +    V+ TGGDP       L++++             + + +    
Sbjct: 60  QGKQLLSDLASYERPKPLVVLTGGDPFERQD--LEELVD------------YGTSLGLNV 105

Query: 185 ---PIVDPQRINPELIQCLKEA-GKPVYIA-------IH-----ANHPYEFSEEAIAAIS 228
              P V P R+ PE I  L E  GK + ++        H      +    F      A +
Sbjct: 106 SLSPSVTP-RLTPERIHRLYELGGKAMSMSLDGATAETHDAFRGFS--GTFDTTVKRA-A 161

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
            +  AG  L   S L K    +      L++T + +  K +Y+       
Sbjct: 162 DILQAGFRLQINSTLTK---SNIREAPALLKTVMGMGAKMWYVFFLVPTG 208


>gi|237727284|ref|ZP_04557765.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|229434140|gb|EEO44217.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
          Length = 368

 Score = 45.1 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 22/156 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           P     +L   C + C  CF      V  + G +L  +        +Q+   ++ ++ TG
Sbjct: 24  PITANFELTPTCTLNCDMCFIHTERNVVERHGGLLPLQQWLDWAEQLQDMGTLF-ILLTG 82

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+P++      +++   LR +  +  L         +   I+ E+++ L+          
Sbjct: 83  GEPMLYP--HFKELYTRLREMGFILTL-------NTNGTLIDNEMVRILQTHKPRRVNVT 133

Query: 212 HANHPYEFSEEAI----------AAISRLANAGIIL 237
                 E                 A+ RL  AGI +
Sbjct: 134 LYGSSRETYGRLCHNPQGYTLCVEALKRLKKAGIDV 169


>gi|312795515|ref|YP_004028437.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           rhizoxinica HKI 454]
 gi|312167290|emb|CBW74293.1| Molybdenum cofactor biosynthesis protein A [Burkholderia
           rhizoxinica HKI 454]
          Length = 372

 Score = 45.1 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 13/121 (10%)

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRRE 116
           R+ IP   EL+ +P     P G      +  +    P R L + +   C   C +C  R 
Sbjct: 12  RRVIPL-NELSAVPAFSSAP-GAPRGHVIDRLAR--PLRDLRISVTDRCNFRCVYCMPRT 67

Query: 117 MVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           + G          +L+ ++ E        +  + ++  TGG+PL+   K L+++++ L  
Sbjct: 68  VFGRDYPFLPHSALLTFEEIERVARLFVAQ-GVEKIRLTGGEPLL--RKHLERLIERLAA 124

Query: 172 I 172
           +
Sbjct: 125 L 125


>gi|283956404|ref|ZP_06373884.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283792124|gb|EFC30913.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 416

 Score = 45.1 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 18/132 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     +  +L   +   A  Y        E++ 
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184

Query: 150 TGGD--PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +     L +   L K+L+ +  I  ++ +R  S    ++P +I+   ++ L E    
Sbjct: 185 TGTNIGSYGLKNGTSLGKLLRKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLE 240

Query: 207 VYIAIHANHPYE 218
            ++ I   H  E
Sbjct: 241 RHLHIALQHTSE 252


>gi|218134604|ref|ZP_03463408.1| hypothetical protein BACPEC_02507 [Bacteroides pectinophilus ATCC
           43243]
 gi|217989989|gb|EEC56000.1| hypothetical protein BACPEC_02507 [Bacteroides pectinophilus ATCC
           43243]
          Length = 354

 Score = 45.1 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 29/164 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI----FTGGDP 154
             +   C   C+ C+     G  +   ++ K  +  +A  ++  +I+  +     TGGDP
Sbjct: 12  WHITDECDQRCKHCYIFSGKGCSELKSMTWKQMQEVVANCEDFCRIYNKLPYFYITGGDP 71

Query: 155 LILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210
           ++     +L  +LK+ R I             + +P  ++ E+   LK  G   Y     
Sbjct: 72  ILHPDFWKLMVLLKS-RGIPF---------TIMGNPFHLDDEVCTILKACGCEKYQMSLD 121

Query: 211 ----IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
                H     P  F    +  +  L  AGI     SV++  ++
Sbjct: 122 GMRSTHDWFRKPRSFD-LTLEKVGCLNRAGIK----SVIMSTVS 160


>gi|171320975|ref|ZP_02909966.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           MEX-5]
 gi|171093770|gb|EDT38910.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           MEX-5]
          Length = 372

 Score = 45.1 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 46/245 (18%), Positives = 87/245 (35%), Gaps = 57/245 (23%)

Query: 85  PLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE-- 140
           PL  +    P R L L ++  C   C +C  R+  G     + SS+    A L  I    
Sbjct: 31  PLDTLAR--PLRDLRLSVIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAF 88

Query: 141 -KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV--------------------QILR 179
               + ++  TGG+PL+   + L+ +++ L  +  +                    + LR
Sbjct: 89  ISLGVEKIRLTGGEPLL--RRNLEALIERLATLTTIDGKPVEIALTTNGSLLAAKARTLR 146

Query: 180 FH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-II 236
               SRV +     I+  + + + +A  PV   +             A I     AG   
Sbjct: 147 DAGLSRVTVSL-DAIDDVVFRRMSDADVPVARVL-------------AGIEAAQAAGLAP 192

Query: 237 LLSQSVLLKGINDD--PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEG 290
           +   +V+ +G NDD    ++ +     V +R   Y         G S +     +     
Sbjct: 193 VKVNAVIERGANDDQILPLVRHFRHGGVAVRFIEY-----MDVGGASAWSGDKVVPATRM 247

Query: 291 QKIVA 295
           ++++ 
Sbjct: 248 RELIE 252


>gi|46907279|ref|YP_013668.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47092939|ref|ZP_00230720.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           str. 4b H7858]
 gi|254933405|ref|ZP_05266764.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           HPB2262]
 gi|67460888|sp|Q721B9|MOAA_LISMF RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|46880546|gb|AAT03845.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47018686|gb|EAL09438.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           str. 4b H7858]
 gi|293584966|gb|EFF96998.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           HPB2262]
 gi|328466819|gb|EGF37933.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes
           1816]
 gi|332311456|gb|EGJ24551.1| Molybdenum cofactor biosynthesis protein [Listeria monocytogenes
           str. Scott A]
          Length = 333

 Score = 45.1 bits (106), Expect = 0.018,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  +  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           V  TGG+PL+ +   + ++++ L  I  ++ +   +            +  + LK+AG  
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKDAGLT 116

Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250
            V I++ + H   F               I +    G   +    VL+KG NDD
Sbjct: 117 RVNISLDSLHEDRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170


>gi|311694651|gb|ADP97524.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [marine bacterium HP15]
          Length = 298

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 56/161 (34%), Gaps = 23/161 (14%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           ++L + + C    C FC        +          +      +    +  V    GD +
Sbjct: 22  LILPVTNGCSWNKCTFCEMYTQPQKKFRARKPEDVLQDIRNAARSLGGVRRVFLADGDAM 81

Query: 156 ILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIAI 211
           +L  +RL ++L  LR     +Q +          P    +   E +  LK+AG  +    
Sbjct: 82  VLPTRRLLEILGQLREAFPDLQRV-----SSYCLPRNLAKKTVEELAQLKDAGLEILYVG 136

Query: 212 HANHPYEF--------SEE-AIAAISRLANAG----IILLS 239
             +   E         + E   +A+ ++  AG    +++L+
Sbjct: 137 MESGDDEILRRVNKGETWESTRSALLKIREAGLTSSVMVLN 177


>gi|306821117|ref|ZP_07454733.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550810|gb|EFM38785.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 475

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 21/135 (15%), Positives = 56/135 (41%), Gaps = 14/135 (10%)

Query: 78  IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           + D + + ++G+  V RY  +  + +++ C  +C +C        ++ + L     +   
Sbjct: 165 VWDIDGNIVEGLPSVRRYDFKAFVNIMYGCNNFCTYCI-VPFTRGRERSRLPKDILDEVK 223

Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKV-----LKTLRYIKHVQILRFHSRVPIVDPQ 190
             +  ++ + E+   G +     +    K      L+ +  + +++ +RF +      P+
Sbjct: 224 --LLAQNNVKEITLLGQNVNSYGNNFTDKYSFPMLLEDINKVDNIRRIRFMTSH----PK 277

Query: 191 RINPELIQCLKEAGK 205
            I+ ELI+      K
Sbjct: 278 DISDELIESFGRLDK 292


>gi|237746858|ref|ZP_04577338.1| radical SAM family protein [Oxalobacter formigenes HOxBLS]
 gi|229378209|gb|EEO28300.1| radical SAM family protein [Oxalobacter formigenes HOxBLS]
          Length = 298

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 65/157 (41%), Gaps = 23/157 (14%)

Query: 95  DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGG 152
           + ++L++ + C    C +C        ++ +V   +D +  + +       I  V    G
Sbjct: 20  NSLILQVTNGCSWNKCTYCDMYTQPQ-KRFSVKPEEDVKKEIEWFSRHYDGIQRVFLADG 78

Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIV-DPQRI----NPELIQCLKEAGKP 206
           D + LS +RL  +L T+R  +  V      +RV     P+ +    + EL        K 
Sbjct: 79  DVVALSTRRLLNILNTIREYLPEV------TRVASYCSPRNVANKSDEELKTLFDAGLKQ 132

Query: 207 VYI--------AIHANHPYEFSEEAIAAISRLANAGI 235
           VY+         + + +  E  +  + A++RL +AGI
Sbjct: 133 VYVGAESGDDFVLESINKGETHQSTVEALNRLGDAGI 169


>gi|189348694|ref|YP_001941890.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans ATCC 17616]
 gi|189338832|dbj|BAG47900.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans ATCC 17616]
          Length = 374

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 45/195 (23%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
           L ++  C   C +C  RE+ GS    +  +     A L  I        + ++  TGG+P
Sbjct: 46  LSVIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLERIARAFVSLGVEKIRITGGEP 105

Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
           L+   + L+ +++ L  +  V                    + LR    +RV +     +
Sbjct: 106 LL--RRHLETLIERLAALTTVDGRPVELALTTNGALLAAKARTLRDAGLTRVTVSL-DAL 162

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
           +  + + + +A  PV   +             A I     AG   +   +V+ +G NDD 
Sbjct: 163 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGANDD- 208

Query: 252 EILANLMRTFVELRI 266
             +  L+R F    +
Sbjct: 209 -QILPLVRHFRHTGV 222


>gi|302554728|ref|ZP_07307070.1| radical SAM domain-containing protein [Streptomyces
           viridochromogenes DSM 40736]
 gi|302472346|gb|EFL35439.1| radical SAM domain-containing protein [Streptomyces
           viridochromogenes DSM 40736]
          Length = 409

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 70/191 (36%), Gaps = 35/191 (18%)

Query: 96  RILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----V 147
             +LK+   C + C +C      +    Q+  V+S          I E  ++       V
Sbjct: 34  TFILKVHSRCDLACDYCYMYTAADQTWRQQPRVMSPAVVTWTARRIAEHVRVHGLRQVAV 93

Query: 148 IFTGGDPLILSHKRLQKVLKTL-RYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
           +  GG+PL+   +RL++++  + R +     +R    +        R+    +    E  
Sbjct: 94  VLHGGEPLLAGPRRLRQIVTEIAREVGPEVRVRTSVQTNGV-----RLTDAWLDLFAELD 148

Query: 205 KPVYIAI---------HANHP--YEFSEEAIAAISRLANA-----GIILLSQSVLLKGIN 248
             V ++I         H  HP      ++   A+ RLA A        LL  +V L+  N
Sbjct: 149 IRVGVSIDGGRSEHDRHRRHPDGRGSHDQVAQAVQRLAAAPRRRLFAGLLC-TVDLR--N 205

Query: 249 DDPEILANLMR 259
           D       L+R
Sbjct: 206 DPVATYEELLR 216


>gi|228945768|ref|ZP_04108115.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228813989|gb|EEM60263.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 333

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 14  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 72

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 73  PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 124

Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                        H +     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 125 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171


>gi|229091138|ref|ZP_04222361.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock3-42]
 gi|228692269|gb|EEL46005.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock3-42]
          Length = 333

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 14  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 72

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 73  PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 124

Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                        H +     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 125 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171


>gi|229184372|ref|ZP_04311579.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BGSC
           6E1]
 gi|228599168|gb|EEK56781.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BGSC
           6E1]
          Length = 333

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 14  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 72

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 73  PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 124

Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                        H +     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 125 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171


>gi|118477567|ref|YP_894718.1| GTP cyclohydrolase subunit MoaA [Bacillus thuringiensis str. Al
           Hakam]
 gi|225864114|ref|YP_002749492.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           03BB102]
 gi|118416792|gb|ABK85211.1| GTP cyclohydrolase subunit MoaA [Bacillus thuringiensis str. Al
           Hakam]
 gi|225790320|gb|ACO30537.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           03BB102]
          Length = 337

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128

Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                        H +     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175


>gi|49481735|ref|YP_036288.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|301053674|ref|YP_003791885.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis CI]
 gi|49333291|gb|AAT63937.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|300375843|gb|ADK04747.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus biovar
           anthracis str. CI]
          Length = 337

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128

Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                        H +     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175


>gi|52143300|ref|YP_083529.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
 gi|51976769|gb|AAU18319.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
          Length = 337

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128

Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                        H +     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175


>gi|30262154|ref|NP_844531.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Ames]
 gi|47778008|ref|YP_018776.2| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49184996|ref|YP_028248.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Sterne]
 gi|167633002|ref|ZP_02391328.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0442]
 gi|167638349|ref|ZP_02396626.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0193]
 gi|170686396|ref|ZP_02877617.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0465]
 gi|170706016|ref|ZP_02896478.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0389]
 gi|177650979|ref|ZP_02933876.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0174]
 gi|229602502|ref|YP_002866510.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0248]
 gi|254684722|ref|ZP_05148582.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           CNEVA-9066]
 gi|254720932|ref|ZP_05182723.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A1055]
 gi|254737167|ref|ZP_05194871.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Western North America USA6153]
 gi|254743647|ref|ZP_05201332.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Kruger B]
 gi|254751482|ref|ZP_05203519.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Vollum]
 gi|254758355|ref|ZP_05210382.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Australia 94]
 gi|30256780|gb|AAP26017.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Ames]
 gi|47551713|gb|AAT31251.2| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49178923|gb|AAT54299.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Sterne]
 gi|167513650|gb|EDR89019.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0193]
 gi|167531814|gb|EDR94479.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0442]
 gi|170129018|gb|EDS97883.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0389]
 gi|170669472|gb|EDT20214.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0465]
 gi|172083440|gb|EDT68501.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0174]
 gi|229266910|gb|ACQ48547.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0248]
          Length = 337

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128

Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                        H +     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175


>gi|70725785|ref|YP_252699.1| hypothetical protein SH0784 [Staphylococcus haemolyticus JCSC1435]
 gi|82592973|sp|Q4L8D2|MOAA_STAHJ RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|68446509|dbj|BAE04093.1| moaA [Staphylococcus haemolyticus JCSC1435]
          Length = 340

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/177 (18%), Positives = 66/177 (37%), Gaps = 44/177 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G       K  +L+ ++    +A +  +  + ++  TGG+
Sbjct: 18  ISVTDRCNFRCDYCMPKEIFGDDYVFLPKDELLTFEEMVR-IAKVYAELGVKKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+   + L +++  L  I  ++ +   +                 LK+ G+ +Y     
Sbjct: 77  PLL--RRNLYQLIAELNQIDGIEDIGMTTNGL-------------LLKKHGQKLYDAGLR 121

Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250
            I +  +       E   AI+        +L Q               V+ KGINDD
Sbjct: 122 RINVSLDA---IDNEVFQAINNRNIKATTILDQIDYAVSIGFHVKVNVVIQKGINDD 175


>gi|86150946|ref|ZP_01069162.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315124495|ref|YP_004066499.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85842116|gb|EAQ59362.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315018217|gb|ADT66310.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 416

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 18/132 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     +  +L   +   A  Y        E++ 
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184

Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +     L +   L K+L+ +  I  ++ +R  S    ++P +I+   ++ L E    
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLE 240

Query: 207 VYIAIHANHPYE 218
            ++ I   H  E
Sbjct: 241 RHLHIALQHTSE 252


>gi|238026593|ref|YP_002910824.1| molybdenum cofactor biosynthesis protein A [Burkholderia glumae
           BGR1]
 gi|237875787|gb|ACR28120.1| Molybdenum cofactor biosynthesis protein A [Burkholderia glumae
           BGR1]
          Length = 370

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 47/197 (23%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F ++        +LS ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRDVFDKDYPFLPHSALLSLEELERVARLFVAH-GVEKIRITGGE 99

Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191
           PL+   K L+ +++ L  ++ V                    + LR    +RV +     
Sbjct: 100 PLL--RKNLEFLIERLARMQTVGGHPLDLTLTTNGSLLARKARSLRDAGLTRVTVSL-DA 156

Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDD 250
           ++  L + +             N     S + +  I    +AG   +    V+ +G ND 
Sbjct: 157 LDDALFRRM-------------NDANFASADVLEGIFAAQDAGLAPVKVNMVVKRGTND- 202

Query: 251 PEILANLMRTFVELRIK 267
              +  + R F    I 
Sbjct: 203 -AEIVPMARRFKGTGIV 218


>gi|182418337|ref|ZP_02949632.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237666343|ref|ZP_04526328.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182377719|gb|EDT75263.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237657542|gb|EEP55097.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 466

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 20/121 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  LK+   C  +C +C             + SKD E  ++ I++ ++    E+I +G
Sbjct: 173 KTRAFLKIQDGCNRFCAYCLI-----PYTRGAVCSKDPEKVISEIKKLAEHGFKEIILSG 227

Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                   D  +     L  +L+ +  +  ++ +R  S  P          +I+ +K   
Sbjct: 228 IHTASYGVD--LEGDVSLMTILEEIEKVDGIERVRIGSIEPCF----FTDSVIEKMKSMK 281

Query: 205 K 205
           K
Sbjct: 282 K 282


>gi|157415263|ref|YP_001482519.1| MiaB-like tRNA modifying protein [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|157386227|gb|ABV52542.1| hypothetical protein C8J_0943 [Campylobacter jejuni subsp. jejuni
           81116]
 gi|307747905|gb|ADN91175.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           M1]
 gi|315932134|gb|EFV11077.1| RNA modification enzyme, MiaB family protein [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 416

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 18/132 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     +  +L   +   A  Y        E++ 
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184

Query: 150 TGGD--PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +     L +   L K+L+ +  I  ++ +R  S    ++P +I+   ++ L E    
Sbjct: 185 TGTNIGSYGLKNGTSLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLE 240

Query: 207 VYIAIHANHPYE 218
            ++ I   H  E
Sbjct: 241 RHLHIALQHTSE 252


>gi|167747072|ref|ZP_02419199.1| hypothetical protein ANACAC_01784 [Anaerostipes caccae DSM 14662]
 gi|167654032|gb|EDR98161.1| hypothetical protein ANACAC_01784 [Anaerostipes caccae DSM 14662]
          Length = 439

 Score = 44.7 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 20/118 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
             R  +K+   C  +C +C     +       + S+D E  L+ I+   ++   E + T 
Sbjct: 146 HTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRDMEDVLSEIRGLAQNGCREFVITG 200

Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
                 G D  +   K L  +L+ +  +  V  +R  S    ++P  I  + ++ L+ 
Sbjct: 201 IHVCSYGTD--LDGDKGLIDLLEEIGKVGGVDRIRLGS----LEPGIITEDFVKRLQS 252


>gi|317471887|ref|ZP_07931222.1| MiaB family RNA modification enzyme [Anaerostipes sp. 3_2_56FAA]
 gi|316900660|gb|EFV22639.1| MiaB family RNA modification enzyme [Anaerostipes sp. 3_2_56FAA]
          Length = 439

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 20/118 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
             R  +K+   C  +C +C     +       + S+D E  L+ I+   ++   E + T 
Sbjct: 146 HTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRDMEDVLSEIRGLARNGCREFVITG 200

Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
                 G D  +   K L  +L+ +  +  V  +R  S    ++P  I  + ++ L+ 
Sbjct: 201 IHVCSYGTD--LDGDKGLIDLLEEIGKVGGVDRIRLGS----LEPGIITEDFVKRLQS 252


>gi|313112748|ref|ZP_07798396.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310624947|gb|EFQ08254.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 322

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 16/158 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  +C + CR+C    +       +L+ ++     A   +   I  V  TGG+PL+  
Sbjct: 14  LSVTDLCNLRCRYCMPDGVPKLAHEDILTYEEFLRLAALFAQC-GIDTVRITGGEPLV-- 70

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216
            + ++++   L+ I  ++ +   +   ++       +L   L      V I++   HP  
Sbjct: 71  RRGVEQLTAGLKAIPGIRRVALTTNGVLLA-----QKLPALLAAGLDSVNISLDTLHPET 125

Query: 217 -YEFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248
               +           I     +GI +    V   G+N
Sbjct: 126 FRRITGKDELAAVQNGIRAALASGIPVKLNCVPQPGVN 163


>gi|311070188|ref|YP_003975111.1| molybdenum cofactor biosynthesis protein A [Bacillus atrophaeus
           1942]
 gi|310870705|gb|ADP34180.1| molybdenum cofactor biosynthesis protein A [Bacillus atrophaeus
           1942]
          Length = 341

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 63/182 (34%), Gaps = 41/182 (22%)

Query: 93  YPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143
             DR L    + +   C   C +C   E+ G       K  +LS ++ E        +  
Sbjct: 11  KRDRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLAKLFVSRFG 70

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP-------QRIN 193
           + ++  TGG+PL+     + +++K L  I  V+ +      S +P+           R+ 
Sbjct: 71  VEKIRLTGGEPLMRKD--MPELIKKLARIPGVRDIAMTTNGSLLPVYAEKLKNAGLHRVT 128

Query: 194 -------PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
                   E  + +   G  V   +               I     AG+ +    V+ KG
Sbjct: 129 VSLDSLEDERFKAINGRGVSVSKVL-------------EGIEAAKQAGLGIKVNMVVQKG 175

Query: 247 IN 248
           +N
Sbjct: 176 VN 177


>gi|260886564|ref|ZP_05897827.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185]
 gi|330839603|ref|YP_004414183.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
 gi|260863707|gb|EEX78207.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185]
 gi|329747367|gb|AEC00724.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
          Length = 330

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 16/106 (15%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
             + C +YC+ C+R    G +    LS+ + +  L  I   +    +IF+GG+PL     
Sbjct: 7   TTNACNMYCKHCYRDA--GCKAEEELSTAEAKKLLDEIAR-AGFKIMIFSGGEPLTRPD- 62

Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
            + ++++    +     LR  F +   +     I PE+ + LK AG
Sbjct: 63  -ILELVEHATKLG----LRSVFGTNGTL-----ITPEMARDLKAAG 98


>gi|169333944|ref|ZP_02861137.1| hypothetical protein ANASTE_00330 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259509|gb|EDS73475.1| hypothetical protein ANASTE_00330 [Anaerofustis stercorihominis DSM
           17244]
          Length = 408

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  +K+   C ++C +C     +      +L +   E  L+ I    K    EV+ TG
Sbjct: 120 KSRAFIKVQDGCNMFCTYC-----IIPYARGILKNASVEKVLSQIDALSKKGYREVVITG 174

Query: 152 GDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                      + ++  L  I     +  +R  S    ++P+ +    ++ L E  K   
Sbjct: 175 IHVASYKADTGENLIDLLELIDKENKIDRIRLGS----LEPKLLTDTFLKRLSEL-KSFC 229

Query: 209 IAIHAN 214
              H +
Sbjct: 230 PHFHIS 235


>gi|34557848|ref|NP_907663.1| 2-methylthioadenine synthetase [Wolinella succinogenes DSM 1740]
 gi|34483566|emb|CAE10563.1| conserved hypothetical protein-2-methylthioadenine synthetase
           [Wolinella succinogenes]
          Length = 416

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 67/183 (36%), Gaps = 23/183 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C    + G  K   L      + +  + +     E + TG +
Sbjct: 133 KSRAFVKVQEGCDFSCSYCIIPSVRG--KARSLPVDRIVSQVEILAQH-GFGEFVLTGTN 189

Query: 154 PLILSHK---RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE----AGKP 206
                 +    + K+LK L  IK V+ LR  S    ++P +I+ E ++ L+E        
Sbjct: 190 VGSYGKESGLNVAKLLKALSQIKGVKRLRLGS----LEPSQIDAEFMELLEEPFMARHLH 245

Query: 207 VYI------AIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           + +       +   N   E   +  A   RLA  G  L +   +L    +  E+      
Sbjct: 246 IALQHTSPKMLQIMNRRNEAQGDL-ALFERLAQKGYALGTDF-ILGHPGESEEVWKEAWE 303

Query: 260 TFV 262
            FV
Sbjct: 304 RFV 306


>gi|146306671|ref|YP_001187136.1| radical SAM domain-containing protein [Pseudomonas mendocina ymp]
 gi|145574872|gb|ABP84404.1| Radical SAM domain protein [Pseudomonas mendocina ymp]
          Length = 297

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 9/87 (10%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152
           ++L + + C    C FC   EM  + +    +  + +  L  I+   +   +  V    G
Sbjct: 23  LILPVTNGCSWNQCTFC---EMYTAPQKKFRARDEAQ-VLEEIRRAGEQLIVNRVFLADG 78

Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
           D L+L  +RL  +L+ +R  +  V+ +
Sbjct: 79  DALVLPTRRLLAILQAIREHMPEVRRV 105


>gi|300870181|ref|YP_003785052.1| MiaB-like tRNA modifying enzyme [Brachyspira pilosicoli 95/1000]
 gi|300687880|gb|ADK30551.1| MiaB-like tRNA modifying enzyme [Brachyspira pilosicoli 95/1000]
          Length = 415

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 9/123 (7%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C V+C +C    + G  K    +      A+  I       E++ TG +
Sbjct: 126 QSRAYLKIQDGCEVFCSYCIVSRVRGKHKSLEPNK--IYEAIK-IANDYNYKEIVLTGLN 182

Query: 154 --PLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                 +++ +   +LK +        +R   R+  V+P   + ELI   K     +   
Sbjct: 183 LGSYNFNNEIKFADILKNILEHSSKYGIRI--RLSSVEPIYFDDELINLFKNKDV-LCPH 239

Query: 211 IHA 213
            H 
Sbjct: 240 AHI 242


>gi|296502742|ref|YP_003664442.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           BMB171]
 gi|296323794|gb|ADH06722.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           BMB171]
          Length = 337

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L  ++  L  ++ +Q +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LSTLIARLTNLEGLQDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128

Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
               H     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175


>gi|30020258|ref|NP_831889.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           14579]
 gi|229043907|ref|ZP_04191603.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
 gi|29895808|gb|AAP09090.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           14579]
 gi|228725438|gb|EEL76699.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
          Length = 337

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L  ++  L  ++ +Q +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LSTLIARLTNLEGLQDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128

Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
               H     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175


>gi|255081048|ref|XP_002504090.1| molybdopterin synthase [Micromonas sp. RCC299]
 gi|226519357|gb|ACO65348.1| molybdopterin synthase [Micromonas sp. RCC299]
          Length = 365

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 44/211 (20%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           + RQ    +EE       R  P+ D       G  H Y   + + L   C + C +C   
Sbjct: 25  LRRQ---LREE---AIAGRSGPLEDT-----FGRRHNY---LRISLTEKCNLRCLYCMPE 70

Query: 116 EMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
           E +  + K  +LS+ +             + ++  TGG+P +     L+++++ LR +  
Sbjct: 71  EGIDLTAKEELLSTDEVVRVARLFVAN-GVDKIRLTGGEPTVRPD--LEEIIRRLRALPG 127

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN--------------HPYEFS 220
           ++ +   +              +  L+ AG       H N                    
Sbjct: 128 LRDIAITTNGLT------LHRNLHALQAAGL-----THVNISLDTLVPPKFELLTRRRGH 176

Query: 221 EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
           +  + +I R    G   +    VL++G+NDD
Sbjct: 177 DRVLKSIDRAVELGYDPVKVNVVLMRGVNDD 207


>gi|255282411|ref|ZP_05346966.1| MiaB protein [Bryantella formatexigens DSM 14469]
 gi|255266995|gb|EET60200.1| MiaB protein [Bryantella formatexigens DSM 14469]
          Length = 454

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 15/125 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C  +C +C      G  +   L+  D  A ++ + E     EV+ TG  
Sbjct: 173 HTRAYIKVQDGCNQFCSYCIIPYARGRIRSRELA--DVLAEVSTLAEN-GYQEVVLTGIH 229

Query: 154 PLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                 ++     L ++++ +  ++ ++ +R  S    ++P+ I  E  + L E  K   
Sbjct: 230 LSSYGKEKDDGIGLLQLIEAVHEVEGIRRIRLGS----LEPRIITEEFAERLSELPK--- 282

Query: 209 IAIHA 213
           I  H 
Sbjct: 283 ICPHF 287


>gi|325295204|ref|YP_004281718.1| MiaB-like tRNA modifying enzyme [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065652|gb|ADY73659.1| MiaB-like tRNA modifying enzyme [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 437

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 17/127 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C ++C +C     +  +    + S+  E  L  ++E   S   E++ T 
Sbjct: 142 KTRAFLKIQQGCELFCSYC-----IIPKARGKMLSEKPEKVLEQVKELINSGYKEIVLTG 196

Query: 151 ---GGDPLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
              GG  L L     L K+++ +  I  +  LR  S    V+P   + ELI+ +  + K 
Sbjct: 197 THLGGYGLDLEESLSLAKLIEKIVKIPGLYRLRISS----VEPIEFSDELIEVVTSSPK- 251

Query: 207 VYIAIHA 213
           +   +H 
Sbjct: 252 IAPHLHI 258


>gi|315638251|ref|ZP_07893433.1| 2-methylthioadenine synthetase [Campylobacter upsaliensis JV21]
 gi|315481787|gb|EFU72409.1| 2-methylthioadenine synthetase [Campylobacter upsaliensis JV21]
          Length = 413

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             +  +K+   C   C +C     V  +  +V  S   E     IQ      E++ TG +
Sbjct: 131 HTKAFVKIQEGCDFNCSYCII-PSVRGRSRSVKESDLLEQIKILIQN--GYTEIVLTGTN 187

Query: 154 --PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                L     L K+L+ +  I  ++ +R  S    ++P +I+   ++ L E     ++ 
Sbjct: 188 IGSYGLKDGTTLGKLLQKMMQISGLKRIRLGS----LEPAQIDESFMEILDEKLLERHLH 243

Query: 211 IHANHPYE 218
           I   H  E
Sbjct: 244 IALQHTSE 251


>gi|261419008|ref|YP_003252690.1| radical SAM protein [Geobacillus sp. Y412MC61]
 gi|319765824|ref|YP_004131325.1| radical SAM protein [Geobacillus sp. Y412MC52]
 gi|261375465|gb|ACX78208.1| Radical SAM domain protein [Geobacillus sp. Y412MC61]
 gi|317110690|gb|ADU93182.1| Radical SAM domain protein [Geobacillus sp. Y412MC52]
          Length = 372

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 67/182 (36%), Gaps = 28/182 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ +L   C + C  C R E    +    L+ ++ +  +  I E  Q   ++FTGGD
Sbjct: 8   PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYEMDQPM-LVFTGGD 65

Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
           PL+      L K       I   + LR  S  P   P  +  E I+  KE G   +    
Sbjct: 66  PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLSRWAFSL 116

Query: 209 ------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI---LANLMR 259
                 I  H        +  I AI  L    I +   +V+ +    +  +   +A L+ 
Sbjct: 117 DGPNAEIHDHFRGVSGSFDLTIRAIQYLHELDIPVQINTVISRY---NVHVLNEMAALVE 173

Query: 260 TF 261
             
Sbjct: 174 KL 175


>gi|57242028|ref|ZP_00369968.1| MiaB-like tRNA modifying enzyme [Campylobacter upsaliensis RM3195]
 gi|57017220|gb|EAL54001.1| MiaB-like tRNA modifying enzyme [Campylobacter upsaliensis RM3195]
          Length = 413

 Score = 44.7 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 10/128 (7%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             +  +K+   C   C +C     V  +  +V  S   E     IQ      E++ TG +
Sbjct: 131 HTKAFVKIQEGCDFNCSYCII-PSVRGRSRSVKESDLLEQIKILIQN--GYTEIVLTGTN 187

Query: 154 --PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                L     L K+L+ +  I  ++ +R  S    ++P +I+   ++ L E     ++ 
Sbjct: 188 IGSYGLKDGTTLGKLLQKMMQISGLKRIRLGS----LEPAQIDESFMEILDEKLLERHLH 243

Query: 211 IHANHPYE 218
           I   H  E
Sbjct: 244 IALQHTSE 251


>gi|212704636|ref|ZP_03312764.1| hypothetical protein DESPIG_02699 [Desulfovibrio piger ATCC 29098]
 gi|212672035|gb|EEB32518.1| hypothetical protein DESPIG_02699 [Desulfovibrio piger ATCC 29098]
          Length = 335

 Score = 44.7 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 19/162 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L L   C + C +C             VL  ++    +  I     + +V  TGG+P   
Sbjct: 19  LSLTDRCNLRCLYCHSNARHQCIPHEKVLRYEEMIRLVQ-IVRGMGVGKVRLTGGEPFAR 77

Query: 158 S--HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP--QRINPELIQCLKEA--GKPVY 208
                 L ++ +    +     +R     + +    P  QRI    +    ++   +   
Sbjct: 78  KGCDDFLLRLRQRFDDLD----IRITTNGTLLEEHIPLLQRIRISAVNLSLDSFDRETFA 133

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                    +   E + A+  +  AGI +   +V L+GIND 
Sbjct: 134 RVT----GRDMLPEVLRALDAMLAAGIRVKINAVGLRGINDS 171


>gi|238019507|ref|ZP_04599933.1| hypothetical protein VEIDISOL_01376 [Veillonella dispar ATCC 17748]
 gi|237864206|gb|EEP65496.1| hypothetical protein VEIDISOL_01376 [Veillonella dispar ATCC 17748]
          Length = 380

 Score = 44.7 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 30/167 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155
                 CP  C FC +  + G    + L+    +  +  Y+  +   + WEV F GG   
Sbjct: 10  FIPHVGCPYVCTFCNQSRITGQSGISHLTPDYIKKTITDYVGKKRNDKFWEVAFYGG-SF 68

Query: 156 ILSHKRLQK-VLKTLRYI---KHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
              H+ LQ  +L+    +     +  +R  +R     P  +  + I  L+  G K V + 
Sbjct: 69  TAIHRDLQHTLLEPAYEMLQQDIIDGIRCSTR-----PDAVGDKAITLLQSYGVKTVELG 123

Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           + +            H  +   E + A++RL   G+ +  Q  LL G
Sbjct: 124 VQSMNDGILVDAKRGHTAQ---EVVDAVARLKQRGMTVGVQ--LLPG 165


>gi|128228|sp|P11067|NIFB_AZOVI RecName: Full=FeMo cofactor biosynthesis protein nifB
 gi|142338|gb|AAA22148.1| nifB [Azotobacter vinelandii]
          Length = 502

 Score = 44.7 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 66/201 (32%), Gaps = 59/201 (29%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H Y  R+ + +   C + C +C R+         G     +   +  +   A      Q
Sbjct: 52  AHHYFARMHVAVAPACNIQCHYCNRKYDCANESRPGVVSEVLTPEQAVKKVKAVAAAIPQ 111

Query: 144 IWEVIFTG-GDPLILSHKRLQ------------------------KVLKTLRY--IKHVQ 176
           +  +   G GDPL    + L                         + ++ L    I HV 
Sbjct: 112 MSVLGIAGPGDPLANPKRTLDTFRMLSEQAPDMKLCVSTNGLALPECVEELAKHNIDHV- 170

Query: 177 ILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVYIAIHANHPYE-----FSEEAIAAIS 228
            +  +     VDP+   +I P+L++                HP         E+    + 
Sbjct: 171 TITIN----CVDPEIGAKIYPDLLE-------------QQAHPRRQGRKILIEQQQKGLE 213

Query: 229 RLANAGIILLSQSVLLKGIND 249
            L   GI++   SV++ G+ND
Sbjct: 214 MLVARGILVKVNSVMIPGVND 234


>gi|229155743|ref|ZP_04283849.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           4342]
 gi|228627729|gb|EEK84450.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           4342]
          Length = 337

 Score = 44.7 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 68/167 (40%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G+      +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGADYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K+++ L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LPKLIERLAKLEGIKDIGLTTNGIHLAKQ------AKVLKEAGLKRVNISLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  +  +     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDYVFQKINGRNVSTKPVLKGMEEAKAAGLEVKVNMVVKKGMNDS 175


>gi|295101447|emb|CBK98992.1| SSU ribosomal protein S12P methylthiotransferase [Faecalibacterium
           prausnitzii L2-6]
          Length = 441

 Score = 44.7 bits (105), Expect = 0.021,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 21/131 (16%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
             LK+   C   C +C     R  +   +    ++     A          + E+I    
Sbjct: 146 AYLKIAEGCNNRCHYCAIPGIRGPLRSREMADCVAEARWLAG-------EGVKELIIVAQ 198

Query: 153 DPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           DP            + ++L  L  I  ++ +R         P+RI  + I  +K   K +
Sbjct: 199 DPTAYGEDWGKPGSICELLDKLNKIPGLEWIRI----MYAYPERITDDFIAAMKRNEKVL 254

Query: 208 -YIAIHANHPY 217
            Y+ +   H  
Sbjct: 255 PYLDLPIQHCN 265


>gi|313112838|ref|ZP_07798485.1| MiaB-like tRNA modifying enzyme YliG [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310624908|gb|EFQ08216.1| MiaB-like tRNA modifying enzyme YliG [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 441

 Score = 44.7 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 54/172 (31%), Gaps = 35/172 (20%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
             LK+   C   C +C     R  +        ++     A          + E+I    
Sbjct: 146 AYLKIAEGCNNRCHYCAIPGIRGPLHSRDMADCVAEARWLAG-------EGVKELIVVAQ 198

Query: 153 DPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           DP            + ++L  L  +  ++ +R         P+RI  E I  +K   K V
Sbjct: 199 DPTAYGEDWGKPGSICELLDKLNKVPGLEWIRI----MYAYPERITDEFIAAMKRNEKVV 254

Query: 208 -YIAIHANHP----------YEFSEEAIAAISRLANA--GIILLSQSVLLKG 246
            Y+ +   H                E +  I +L     GI L   + L+ G
Sbjct: 255 PYLDLPIQHCNDTILKNMNRRSNRAELLEVIGKLRREIPGITLR--TTLIAG 304


>gi|164686289|ref|ZP_02210319.1| hypothetical protein CLOBAR_02727 [Clostridium bartlettii DSM
           16795]
 gi|164601891|gb|EDQ95356.1| hypothetical protein CLOBAR_02727 [Clostridium bartlettii DSM
           16795]
          Length = 432

 Score = 44.7 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 17/120 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  YC +C     +       + S+D E+ +  ++    +   EV+ TG
Sbjct: 141 KTRAFMKIQDGCDRYCSYC-----IIPYARGRVRSRDLESIVKEVENLASNGYKEVVLTG 195

Query: 152 GDPLIL------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                       S  +L  V+K +  I+ ++ +R  S    V+P     E ++ +    K
Sbjct: 196 IHVASYGKDIKDSDIKLLDVIKQINDIEGIERIRLSS----VEPILFTDEFVEAVSTMDK 251


>gi|94269536|ref|ZP_01291489.1| Radical SAM:Molybdenum cofactor synthesis-like [delta
           proteobacterium MLMS-1]
 gi|93451185|gb|EAT02100.1| Radical SAM:Molybdenum cofactor synthesis-like [delta
           proteobacterium MLMS-1]
          Length = 338

 Score = 44.7 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 41/224 (18%), Positives = 79/224 (35%), Gaps = 39/224 (17%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L +   C + CR+C  +      +  +LS ++ E  +  +     I +V  TGG+PL+
Sbjct: 25  VRLAVTDRCNLNCRYCRPKGPCEEPRRELLSYEELERLVRLLVAM-GISKVRLTGGEPLV 83

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
                +   +  LR I  ++ L   +    +    ++   ++ L+ +G  + +    +  
Sbjct: 84  --RHGMIAFMGRLRAIAGLEQLALTTNA-TLLASHLDD--LRQLRLSGLNISLDT-LSAA 137

Query: 217 Y-------EFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRT-------- 260
                   +        I      GI L   +V+ +GIN D+   LA L           
Sbjct: 138 RFATITGQDLFGRVFTVIEAALATGIPLKINAVVQEGINTDELLDLARLAEKWPLEVRFI 197

Query: 261 ---------FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
                                  DLA   +HF+  + E  +IV 
Sbjct: 198 EPMPFAGRDEFSAG-------QWDLARLRAHFQANLPELTEIVR 234


>gi|18309092|ref|NP_561026.1| thiamine biosynthesis protein ThiH [Clostridium perfringens str.
           13]
 gi|18143767|dbj|BAB79816.1| conserved hypothetical protein [Clostridium perfringens str. 13]
          Length = 473

 Score = 44.7 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +      K   L+ +     +  ++        +  G DP+   
Sbjct: 91  LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150

Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
              L  +L  ++ I  ++     +R   R+ +        E  + LK+            
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
             KP Y  +H + P         A+ R   AGI  +   V L G+ D   E LA LM   
Sbjct: 204 YHKPTYEKLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262

Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
                  + P+ L  P       +       + +  E+ +KIVA L+     L  P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312


>gi|258516114|ref|YP_003192336.1| molybdenum cofactor biosynthesis protein A [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257779819|gb|ACV63713.1| molybdenum cofactor biosynthesis protein A [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 325

 Score = 44.7 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 20/163 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C     V + +   +L+ ++ E  +        + ++ FTGG+PL+ 
Sbjct: 14  VSVTDRCNLRCVYCMPAGGVAAARHEDILTLEEIEQVIRA-AADVGVRKIRFTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
             K L  ++K +  I+ +  +   +         + P+  + LK AG K V I++    P
Sbjct: 72  -RKGLPGLVKNIANIRAIDDIALTTNGI------LLPDFGEELKAAGLKRVNISLDTLKP 124

Query: 217 ---YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
               E +     E+    I       +  +   +V+++GINDD
Sbjct: 125 ERFREITRLGALEDVWKGIRAALRLNLTPVKINTVVMRGINDD 167


>gi|253702046|ref|YP_003023235.1| radical SAM protein [Geobacter sp. M21]
 gi|251776896|gb|ACT19477.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 511

 Score = 44.7 bits (105), Expect = 0.022,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 25/126 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L   + C   C +C  +     +  T+LS+K  +  ++   +   I +V  +GGDPL   
Sbjct: 144 LMFSNECETNCSYCQAQRRYLPEN-TLLSAKRWKEIISE-AKSLGIEQVTLSGGDPLYRK 201

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--INPELIQCLKEAG--KPVYIAIHAN 214
                   + L  I  +       ++    P +  I  E+   L E G  KP+      N
Sbjct: 202 --------EALVLIGEL----IAKKMLFQLPTKCCITEEIADRLVEVGMTKPI------N 243

Query: 215 HP-YEF 219
           H   E 
Sbjct: 244 HYLREI 249


>gi|289671288|ref|ZP_06492363.1| hypothetical protein XcampmN_23120 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 33

 Score = 44.7 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
              C V+CR+CFRR    +++    +      A+
Sbjct: 1   TGSCAVHCRYCFRRHFPYAEE--TAARDGWREAV 32


>gi|302671973|ref|YP_003831933.1| MiaB-like tRNA modifying enzyme [Butyrivibrio proteoclasticus B316]
 gi|302396446|gb|ADL35351.1| MiaB-like tRNA modifying enzyme [Butyrivibrio proteoclasticus B316]
          Length = 454

 Score = 44.7 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 30/132 (22%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  +K+   C  +C +C     V       + S++    L  I+   +    EV+ TG
Sbjct: 159 HTRAYIKIQDGCNQFCSYC-----VIPYARGRVRSREMSEILTEIEGLVQKGCKEVVLTG 213

Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
                     G+P+      L  +++ +  I  +  +R  S    ++P+ I  E  + L 
Sbjct: 214 IHIGSYGLDKGEPM------LVDLVEKIADISGIDRIRLGS----IEPRLITAENTRRLA 263

Query: 202 EAGKPVYIAIHA 213
              K   +  H 
Sbjct: 264 AIDK---LCPHF 272


>gi|282857132|ref|ZP_06266378.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
 gi|282585067|gb|EFB90389.1| conserved hypothetical protein [Pyramidobacter piscolens W5455]
          Length = 436

 Score = 44.7 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 20/138 (14%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLS 127
             R D + + + SP       Y  R  +K+   C   C +C     R   V      +L+
Sbjct: 137 GRRWDSL-ELDRSP-------YFGRAFVKVQDGCDHRCTYCIVPVLRGPSVSRPVADILA 188

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
                AA    +       +   G D    S +    +++ L  ++ +Q LRF S    +
Sbjct: 189 EARRCAAAGQFELILTGVHLGLFGRD----SGESFAALVRALDSVEGIQRLRFGS----L 240

Query: 188 DPQRINPELIQCLKEAGK 205
           +P  I  +L++ L ++ +
Sbjct: 241 EPFSIGDDLLEALAQSPR 258


>gi|269797947|ref|YP_003311847.1| MiaB-like tRNA modifying enzyme [Veillonella parvula DSM 2008]
 gi|269094576|gb|ACZ24567.1| MiaB-like tRNA modifying enzyme [Veillonella parvula DSM 2008]
          Length = 431

 Score = 44.7 bits (105), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 17/126 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  +K+   C  YC FC     +       L S+  +  +   +        E++ TG
Sbjct: 143 KTRAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVQEAKRLVDHGFHEIVLTG 197

Query: 152 ---GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
              G+  +    R  L  V+K L  I ++  +RF S    ++   ++ EL++ L    K 
Sbjct: 198 IHLGNYGVELPGRPTLADVVKALLEIPNLYRIRFGS----IESVEVSDELVE-LMATNKR 252

Query: 207 VYIAIH 212
           V   +H
Sbjct: 253 VCPHLH 258


>gi|169342221|ref|ZP_02863304.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens C str. JGS1495]
 gi|169299705|gb|EDS81762.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens C str. JGS1495]
          Length = 473

 Score = 44.7 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +      K   L+ +     +  ++        +  G DP+   
Sbjct: 91  LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150

Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
              L  +L  ++ I  ++     +R   R+ +        E  + LK+            
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
             KP Y  +H + P         A+ R   AGI  +   V L G+ D   E LA LM   
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262

Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
                  + P+ L  P       +       + +  E+ +KIVA L+     L  P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312


>gi|110803728|ref|YP_697445.1| thiamine biosynthesis protein ThiH [Clostridium perfringens SM101]
 gi|110684229|gb|ABG87599.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens SM101]
          Length = 473

 Score = 44.7 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +      K   L+ +     +  ++        +  G DP+   
Sbjct: 91  LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150

Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
              L  +L  ++ I  ++     +R   R+ +        E  + LK+            
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVEDYKRLKDAEIGTYILFQET 203

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
             KP Y  +H + P         A+ R   AGI  +   V L G+ D   E LA LM   
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262

Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
                  + P+ L  P       +       + +  E+ +KIVA L+     L  P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312


>gi|294102421|ref|YP_003554279.1| MiaB-like tRNA modifying enzyme [Aminobacterium colombiense DSM
           12261]
 gi|293617401|gb|ADE57555.1| MiaB-like tRNA modifying enzyme [Aminobacterium colombiense DSM
           12261]
          Length = 434

 Score = 44.7 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 11/142 (7%)

Query: 74  REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           R D +       L         R  +K+   C  +C +C     V  +  +   +   E 
Sbjct: 130 RNDILHSEEWDHLFQFQPLLHSRAFVKIQDGCNHFCSYCVI-PFVRGEPVSRPLNSVLEE 188

Query: 134 ALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
             +     S   EV+ TG   G         L ++++    I  V+ +RF S    ++P 
Sbjct: 189 VRS--IADSGCTEVVLTGVHLGLYGQFGEVSLGELVRQAGAIPGVERIRFGS----LEPF 242

Query: 191 RINPELIQCLKEAGKPVYIAIH 212
            IN EL+  L E        +H
Sbjct: 243 GINDELLSALAETP-QFCPHLH 263


>gi|167463117|ref|ZP_02328206.1| molybdenum cofactor biosynthesis protein A [Paenibacillus larvae
           subsp. larvae BRL-230010]
          Length = 334

 Score = 44.7 bits (105), Expect = 0.024,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 25/177 (14%)

Query: 89  IVHRY---PDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           ++ RY    D + + +   C + C +C   E M       +L+  +    +  +     +
Sbjct: 5   LIDRYGRVHDYLRISVTDRCNLRCVYCMPEEGMEFEPDDHLLTFNEITTVVRVLAR-LGV 63

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            ++  TGG+PL+   K ++ ++  L  I  ++ +   +    + P+       + LK AG
Sbjct: 64  RKLRLTGGEPLV--RKHIEDLVNRLSSIPGIEDIALTTNGMFLGPK------AEQLKAAG 115

Query: 205 KPVYIAIHANHPYE-----FS--EEAIAAISRL-ANAGI---ILLSQSVLLKGINDD 250
               I I  +   E      +   +    +  L A+A +    +    VL+KGINDD
Sbjct: 116 LT-RINISLDSLKEDRFAFITRGGKLKKVLEGLNASAKVGFNPIKLNVVLMKGINDD 171


>gi|253574631|ref|ZP_04851971.1| MiaB-like tRNA modifying enzyme [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251845677|gb|EES73685.1| MiaB-like tRNA modifying enzyme [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 447

 Score = 44.3 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 19/143 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  +     S   + A   +       E++ TG  
Sbjct: 143 HTRAYLKIQEGCNNFCTFCIIPWSRGLSRSRDPQSV-IQQARQLVAA--GYKEIVLTGIH 199

Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
               GD   L + RL  +L  L  ++ +  +R  S    ++  +I+  ++  LK + K  
Sbjct: 200 TGGYGD--DLENYRLSDLLWDLDKVEGLGRIRISS----IEASQIDDRMLDVLKNSSK-- 251

Query: 208 YIAIHANHPYEF-SEEAIAAISR 229
            +  H + P +  S E +  + R
Sbjct: 252 -MCRHFHIPLQAGSNEVLKRMRR 273


>gi|56410451|ref|YP_145825.1| molybdopterin cofactor biosynthesis protein [Geobacillus
           kaustophilus HTA426]
 gi|56378348|dbj|BAD74257.1| molybdopterin cofactor biosynthesis protein (moaA/nifB/pqqE family)
           [Geobacillus kaustophilus HTA426]
          Length = 341

 Score = 44.3 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           L +   C   C +C   E+ G       +G +L+ ++  A LA    +  + ++  TGG+
Sbjct: 22  LSVTDQCNFRCVYCMPAEVFGPNFRFLDEGQLLTVEEM-ALLAECFVELGVEKIRLTGGE 80

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+     L  +++ L  I  ++ +
Sbjct: 81  PLLRRD--LDALIERLSAIPGLRDI 103


>gi|313902875|ref|ZP_07836271.1| Radical SAM domain protein [Thermaerobacter subterraneus DSM 13965]
 gi|313466810|gb|EFR62328.1| Radical SAM domain protein [Thermaerobacter subterraneus DSM 13965]
          Length = 458

 Score = 44.3 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 75/215 (34%), Gaps = 42/215 (19%)

Query: 97  ILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           + L     C + C+FC+            V+       AL+   E + +  V F GG+P 
Sbjct: 111 VNLYTTTRCNLNCKFCYLSADTRQQYGPNVMERTLLAKALSDCAE-AGVMCVNFLGGEPF 169

Query: 156 ILSHKRLQKVLKTLRYIKH------VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +   ++  +       I+H      + I    +  P       +   +  L   G  V +
Sbjct: 170 L--DQQAIRY-----AIEHYYNRFLISITTNGTIAP-------DDYTLSLLSRPGVDVIV 215

Query: 210 AIHANHPYEFSEEAIAA----------ISRLANAGIILLSQSVLLK-GINDDPEILANLM 258
           +IH++ P E  +    A          + RL  AG+    Q VL +    DD   L  + 
Sbjct: 216 SIHSSKP-EVHDFVTQATGAWHRAVHTLKRLTRAGVRTAVQMVLTRFTTKDDVIGLVRMA 274

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           R            +  ++  G+    +++EE   I
Sbjct: 275 RELGANG-----FYVNNMFPGSH---MSLEEYVAI 301


>gi|295111872|emb|CBL28622.1| Predicted Fe-S oxidoreductases [Synergistetes bacterium SGP1]
          Length = 358

 Score = 44.3 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 17/116 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEA----ALAYIQEKSQIWEVIFTGG 152
             +   C   CR C+     G  +  +  ++ K  +      L +     ++     TGG
Sbjct: 9   WHITDECDQRCRHCYI--FSGDPRRKLDSMTWKQLQETFYNCLDFCDVHDRLPYFYLTGG 66

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           DP++            L  + H   + F     + +P  +   + + LK  G   Y
Sbjct: 67  DPILHPD------FWRLLKLFHKHAIPF---TIMGNPFHLTDRVCRELKSLGCQKY 113


>gi|229196388|ref|ZP_04323136.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293]
 gi|228587242|gb|EEK45312.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293]
          Length = 333

 Score = 44.3 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 34/172 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           I ++  TGG+
Sbjct: 14  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GINKIRLTGGE 72

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q         LKEAG K V I++ 
Sbjct: 73  PLLRKD--LPKLIGRLAKLEGLKDIGLTTNGIHLAKQ------ATALKEAGLKRVNISLD 124

Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                        H +     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 125 AIEDCVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171


>gi|182625971|ref|ZP_02953735.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens D str. JGS1721]
 gi|177908778|gb|EDT71285.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens D str. JGS1721]
          Length = 473

 Score = 44.3 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +      K   L+ +     +  ++        +  G DP+   
Sbjct: 91  LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150

Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
              L  +L  ++ I  ++     +R   R+ +        E  + LK+            
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
             KP Y  +H + P         A+ R   AGI  +   V L G+ D   E LA LM   
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262

Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
                  + P+ L  P       +       + +  E+ +KIVA L+     L  P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312


>gi|317128304|ref|YP_004094586.1| RNA modification enzyme, MiaB family [Bacillus cellulosilyticus DSM
           2522]
 gi|315473252|gb|ADU29855.1| RNA modification enzyme, MiaB family [Bacillus cellulosilyticus DSM
           2522]
          Length = 448

 Score = 44.3 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  +      +  + A   +       E++ TG  
Sbjct: 144 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRKP-EEVIKQAEQLVAS--GYKEIVLTGIH 200

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   +    L  +L  L  +  ++ +R  S    ++  +I  E+IQ + ++ K 
Sbjct: 201 TGGYGED---MKDYSLANLLLDLEKVDGLKRIRISS----IEASQITDEVIQVIDQSEK- 252

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 253 VVNHLHV 259


>gi|227499809|ref|ZP_03929904.1| 2-methylthioadenine synthetase [Anaerococcus tetradius ATCC 35098]
 gi|227218113|gb|EEI83381.1| 2-methylthioadenine synthetase [Anaerococcus tetradius ATCC 35098]
          Length = 431

 Score = 44.3 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 18/119 (15%)

Query: 95  DRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
            R  +K+   C +YC +C   + R  + S+    +  +    A      K+   E++ TG
Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNIVSRDMESIKEEAIRLA------KNGYKEIVLTG 195

Query: 152 GDPLI----LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                    L + KRL  V++ +     ++ +R  S    ++P+ I  + ++ +K   K
Sbjct: 196 IHVASYGKDLKNGKRLIDVIEEVAKTDGIERIRLSS----MEPRHITKDFLERMKATRK 250


>gi|319957591|ref|YP_004168854.1| GTP cyclohydrolase subunit moaa [Nitratifractor salsuginis DSM
           16511]
 gi|319419995|gb|ADV47105.1| GTP cyclohydrolase subunit MoaA [Nitratifractor salsuginis DSM
           16511]
          Length = 322

 Score = 44.3 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 44/255 (17%), Positives = 87/255 (34%), Gaps = 46/255 (18%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C   C++C   +      +  +LS +D    +  I     + ++  TGG+PL+ 
Sbjct: 15  VSVTERCNFRCQYCMPEKPFSWVPQENLLSFEDLFKFIK-IAIDEGVSKIRLTGGEPLLR 73

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
               L + +K +   K    L         +   + P+  Q L++AG K + I++     
Sbjct: 74  QD--LDRFVKMIHDYKPDIDL-----ALTTNGY-LLPDTAQALRDAGLKRINISL----- 120

Query: 217 YEFSEEAIAAIS-------------RLANAGIILLSQSVLLKGINDDPEILANL-MRTFV 262
                   A I+             +    G+ +    V LKGIND  EIL  L      
Sbjct: 121 DSLKPAVAAQIAQKNVLGKVLEGIDKALEVGLGVKINMVPLKGIND-AEILDILEYARAR 179

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322
            +R++        +    ++  +    G++I+  +KE+           +          
Sbjct: 180 GIRVR----FIEYMENAHANSEIEGMHGKEILERIKER---YTIRRLGREGA-------- 224

Query: 323 DTHNIKKVGNGSYCI 337
                 K+    Y  
Sbjct: 225 SPSYNYKIEENGYIF 239


>gi|82751856|ref|YP_417597.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           RF122]
 gi|123741049|sp|Q2YYS8|MOAA_STAAB RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|82657387|emb|CAI81829.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           RF122]
          Length = 340

 Score = 44.3 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 66/160 (41%), Gaps = 10/160 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
           L +   C   C +C  +E+ G     +  ++    D  A +A +  +  + ++  TGG+P
Sbjct: 18  LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP--QRINPELIQCLKEAGKPV--YIA 210
           L+     L  ++  L  I  ++ +   +   ++    Q++    ++ +  +   +   + 
Sbjct: 78  LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
              N+    +   +  I    + G+ +    V+ KGINDD
Sbjct: 136 QSINNCNIKATTILEQIDYATSIGLNVKVNVVIQKGINDD 175


>gi|325284885|ref|YP_004264347.1| molybdenum cofactor biosynthesis protein A [Deinococcus
           proteolyticus MRP]
 gi|324316600|gb|ADY27712.1| molybdenum cofactor biosynthesis protein A [Deinococcus
           proteolyticus MRP]
          Length = 332

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 28/178 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C + C +C   E+ G       +  +LS ++ E     +     + ++  TGG+
Sbjct: 15  ISVTDRCNLRCTYCMPAEVFGPDYAFLPQSELLSFEEIERVSRVMVG-LGVQKLRLTGGE 73

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL----------RFHSRVPIVDPQRINPELIQCLKEA 203
           PL+   + L  ++  L  I+ VQ L          RF + +     QR+   L     E 
Sbjct: 74  PLL--RRELPMLVAQLARIEGVQDLAMTTNGLLLPRFAAELKAAGLQRVTVSLDALDAET 131

Query: 204 GKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDD--PEILANLM 258
              +            S E  +A I    +AG+ +   +V+ +G ND    E    L 
Sbjct: 132 FGQMNGLG-------VSPEKVLAGIDAALSAGLGVKLNTVVKRGANDAGLAEFWRELR 182


>gi|260591614|ref|ZP_05857072.1| Fe-S oxidoreductase [Prevotella veroralis F0319]
 gi|260536414|gb|EEX19031.1| Fe-S oxidoreductase [Prevotella veroralis F0319]
          Length = 454

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C      G  +   ++S   + A      K    E++ TG  
Sbjct: 161 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASL-VQQAEE--AAKEGGKEIVLTGVN 217

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +R   ++K L  ++ ++  R  S    ++P  I+ +LI+   ++       
Sbjct: 218 IGDFGETTGERFLDLVKALDKVEGIERFRISS----LEPDLIDDDLIEYCAQSR---AFM 270

Query: 211 IHA 213
            H 
Sbjct: 271 PHF 273


>gi|227488321|ref|ZP_03918637.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC
           51867]
 gi|227091731|gb|EEI27043.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC
           51867]
          Length = 413

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 76/204 (37%), Gaps = 37/204 (18%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTG 151
            P  ++ ++   C + C+ C R +         L++++ +  L  +    + +  V+FTG
Sbjct: 17  KPFIVIWEVTRACALVCKHC-RADAQHEPHPDQLTTEEGKRLLDQLASYEKPYPLVVFTG 75

Query: 152 GDPLILSH-KRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-GKPVY 208
           GDP   S    L +    L   I         S  P V P ++ PE +  L+EA GK + 
Sbjct: 76  GDPFERSDLAELCQYGTDLGLSI---------SLSPSVTP-KVTPERLHELREAGGKAMS 125

Query: 209 IAIHANHPYEFSEEAIAAIS--------------RLANAGIILLSQSVLLKGINDDPEIL 254
           +++        + E   A                 +   G  L   S L KG   +    
Sbjct: 126 MSL-----DGATPETHDAFRGFSGTFDATLEKAPLINAEGYRLQINSTLTKG---NIHEA 177

Query: 255 ANLMRTFVELRIKPYYLHHPDLAA 278
             L++  +E++ K +Y+       
Sbjct: 178 PALLKRVIEMQAKMWYVFFLVPTG 201


>gi|153809478|ref|ZP_01962146.1| hypothetical protein BACCAC_03796 [Bacteroides caccae ATCC 43185]
 gi|149127859|gb|EDM19082.1| hypothetical protein BACCAC_03796 [Bacteroides caccae ATCC 43185]
          Length = 167

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 18/111 (16%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C  +C  C   E      G  L+ +  ++ +  I+    +  V F+GGDPL    + L 
Sbjct: 35  GCSHHCPGCHNPESWNPNAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPLFYPEEFLA 94

Query: 164 KVLKTLRYIKHVQI----------LRFHSRVPIVDPQ-------RINPELI 197
            ++K ++    + I          +R   R+  V P        R   +L 
Sbjct: 95  -LVKRVKEETGMNIWCYTGYTYEEIREQPRLNAVLPYINVLVDGRFEQDLF 144


>gi|168205735|ref|ZP_02631740.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens E str. JGS1987]
 gi|170662764|gb|EDT15447.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens E str. JGS1987]
          Length = 473

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +      K   L+ +     +  ++        +  G DP+   
Sbjct: 91  LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150

Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
              L  +L  ++ I  ++     +R   R+ +        E  + LK+            
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
             KP Y  +H + P         A+ R   AGI  +   V L G+ D   E LA LM   
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262

Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
                  + P+ L  P       +       + +  E+ +KIVA L+     L  P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312


>gi|169235987|ref|YP_001689187.1| coenzyme PQQ synthesis protein E [Halobacterium salinarum R1]
 gi|167727053|emb|CAP13838.1| homolog to coenzyme PQQ synthesis protein E [Halobacterium
           salinarum R1]
          Length = 365

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 42/255 (16%), Positives = 84/255 (32%), Gaps = 59/255 (23%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           P+G  + +P+       P  ++ ++   C + C  C           + LS+ + +  L 
Sbjct: 6   PVG--SMTPVD--TSERPVVLVWEVTQACALACDHCRASARPQR-HPSELSTAEGKQLLT 60

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRIN 193
                     V+ +GGDPL            T+  ++H        R+ +  P     + 
Sbjct: 61  DAAAFGDGQLVVLSGGDPLARPD--------TVELVEHGTDC--GLRMTVT-PSGTASLT 109

Query: 194 PELIQCLKEAGKPVYIA--------IHANHPYEFSEEA------IAAISRLANAGIIL-L 238
           P  I+ L +AG   +           H     EF  EA      + A   +   G+ L +
Sbjct: 110 PTAIEALADAGVAQFAVSIDGATPTTH----DEFRGEAGSFERTLRAARAIRELGVPLQV 165

Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI----- 293
           + +V      D  E L  +     EL +  + +           F + +  G+ +     
Sbjct: 166 NTTVCA----DTVEALPAIRDLVAELGVALWSVF----------FLVPVGRGRALDPVSP 211

Query: 294 --VASLKEKISGLCQ 306
                +   + G+ +
Sbjct: 212 ARAEEVMAWLDGVAR 226


>gi|95928924|ref|ZP_01311669.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
 gi|95134825|gb|EAT16479.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
          Length = 319

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 64/161 (39%), Gaps = 18/161 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDP 154
           L +   C + CR+C       ++   +L  ++     + A+        + ++  TGG+P
Sbjct: 16  LSITDQCNLRCRYCQPHGRAANRTRRLLRDREIMFLAQQAID-----LGVEKIRITGGEP 70

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L+     + ++L  LR ++ +Q L   +   ++   R  P+L     +       ++   
Sbjct: 71  LV--RSGVIRLLSELRALEGLQHLVLTTNGLLLS--RYAPDLAAAGVKRINVSIDSLRHE 126

Query: 215 HPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDD 250
              E +      E    I     AG+ +    V++ G+NDD
Sbjct: 127 RFREITRGGSLVEWCRGIDAAEKAGLTVKLNVVVMAGVNDD 167


>gi|329924074|ref|ZP_08279337.1| tRNA methylthiotransferase YqeV [Paenibacillus sp. HGF5]
 gi|328940913|gb|EGG37221.1| tRNA methylthiotransferase YqeV [Paenibacillus sp. HGF5]
          Length = 447

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 16/126 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  +     S   + A   +       E++ TG  
Sbjct: 142 RTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDPKSI-IKQAHQLVGA--GYKEIVLTGIH 198

Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
               GD   L   RL  +L  L  +  ++ +R  S    ++  +I+ +++  L  + K +
Sbjct: 199 TGGYGD--DLEDYRLSDLLWDLDRVDGLERIRISS----IEASQIDEKMLDVLNRSSK-M 251

Query: 208 YIAIHA 213
              +H 
Sbjct: 252 CRHLHI 257


>gi|261405595|ref|YP_003241836.1| RNA modification enzyme, MiaB family [Paenibacillus sp. Y412MC10]
 gi|261282058|gb|ACX64029.1| RNA modification enzyme, MiaB family [Paenibacillus sp. Y412MC10]
          Length = 447

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 16/126 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  +     S   + A   +       E++ TG  
Sbjct: 142 RTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDPKSI-IKQAHQLVGA--GYKEIVLTGIH 198

Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
               GD   L   RL  +L  L  +  ++ +R  S    ++  +I+ +++  L  + K +
Sbjct: 199 TGGYGD--DLEDYRLSDLLWDLDRVDGLERIRISS----IEASQIDEKMLDVLNRSSK-M 251

Query: 208 YIAIHA 213
              +H 
Sbjct: 252 CRHLHI 257


>gi|186475582|ref|YP_001857052.1| molybdenum cofactor biosynthesis protein A [Burkholderia phymatum
           STM815]
 gi|184192041|gb|ACC70006.1| molybdenum cofactor biosynthesis protein A [Burkholderia phymatum
           STM815]
          Length = 370

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R + G          +L+ ++ E   A       + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRAVFGKDYPFLPHSALLTFEEIERLAAIFVAH-GVEKIRLTGGE 99

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K L+ +++ L  +
Sbjct: 100 PLL--RKNLEFLIERLARM 116


>gi|317125385|ref|YP_004099497.1| radical SAM protein [Intrasporangium calvum DSM 43043]
 gi|315589473|gb|ADU48770.1| Radical SAM domain protein [Intrasporangium calvum DSM 43043]
          Length = 400

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 29/186 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGG 152
           P  ++ ++   C + C  C R +    +    L+++     L  I      +  V+ TGG
Sbjct: 21  PMIVIWEVTRACALVCLHC-RADAQHRRNPHELTTEQGRTLLDDIAAWGAPYPIVVLTGG 79

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAG-----KP 206
           DP       L ++++      H   +  H  + P V P R+ PE++  L+ AG       
Sbjct: 80  DPFERPD--LAELVR------HGSSIGLHMALSPSVTP-RLTPEVLAELRAAGAGALSLS 130

Query: 207 VYIAIHANH------PYEFSEEAIAAISRLANAGIIL-LSQSVLLKGINDDPEILANLMR 259
           +     A H      P  F     AA   + +AG  L ++ +V    +      L +L+R
Sbjct: 131 LDGNTAATHDAFRGVPGVFDATLRAA-QDVRDAGFRLQINSTVTQANV----HELPDLLR 185

Query: 260 TFVELR 265
           T ++L 
Sbjct: 186 TVIDLG 191


>gi|313897359|ref|ZP_07830902.1| tRNA methylthiotransferase YqeV [Clostridium sp. HGF2]
 gi|312957729|gb|EFR39354.1| tRNA methylthiotransferase YqeV [Clostridium sp. HGF2]
          Length = 441

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 14/130 (10%)

Query: 90  VHRY--PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           +HR+    R  LK+   C  +C +C             L   +  A    + E     E+
Sbjct: 136 IHRFEHQTRAFLKIQDGCNQFCSYCIIP--FARGAERSLPEDEVLAIARSLSESGH-REI 192

Query: 148 IFTG---GDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           + +G   G      +  L +++K + + I  +Q +R  S    ++   I  EL++ +K  
Sbjct: 193 VLSGIHTGRYGNGINSSLCQLMKRMVKEIPKLQRIRISS----IEMNEITDELLEFIKGE 248

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 249 EK-IARHLHI 257


>gi|291535169|emb|CBL08281.1| MiaB-like tRNA modifying enzyme [Roseburia intestinalis M50/1]
          Length = 435

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  +C +C     +   +G V S K  E  L  I+   KS   EV+ TG
Sbjct: 143 HTRAFIKVQDGCNQFCSYCI----IPFARGRVRSRK-MEDVLNEIKGLAKSGYKEVVLTG 197

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                  + + + L  +++ +  I+ ++ +R  S    ++P+ +  +  + L E  K   
Sbjct: 198 IHLSSYGVDTGETLLSLIEHVHEIEGIERIRLGS----LEPRIVTEDFAKRLSELTK--- 250

Query: 209 IAIHA 213
           I  H 
Sbjct: 251 ICPHF 255


>gi|262068133|ref|ZP_06027745.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           periodonticum ATCC 33693]
 gi|291378221|gb|EFE85739.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           periodonticum ATCC 33693]
          Length = 348

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 21/146 (14%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
           ++ +  +      CP  C FC ++++ G +    +S  D +  +  Y++      I EV 
Sbjct: 2   KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKEVA 59

Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG         L ++ L+ ++  I +  V+ +R  +R     P+ I+ E++  LK+ G
Sbjct: 60  FFGG-TFTGISMELQKQYLEVVKKYIDNADVEGVRISTR-----PECIDDEILTQLKKYG 113

Query: 205 -KPVYIAIHANHPYEFSEEAIAAISR 229
            K + + I         +E + A  R
Sbjct: 114 VKTIELGI-----QSLDDEVLKATGR 134


>gi|237740803|ref|ZP_04571284.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
 gi|229422820|gb|EEO37867.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 2_1_31]
          Length = 348

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 21/146 (14%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
           ++ +  +      CP  C FC ++++ G +    +S  D +  +  Y++      I EV 
Sbjct: 2   KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKEVA 59

Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG         L ++ L+ ++  I +  V+ +R  +R     P+ I+ E++  LK+ G
Sbjct: 60  FFGG-TFTGISMELQKQYLEVVKKYIDNADVEGVRISTR-----PECIDDEILTQLKKYG 113

Query: 205 -KPVYIAIHANHPYEFSEEAIAAISR 229
            K + + I         +E + A  R
Sbjct: 114 VKTIELGI-----QSLDDEVLKATGR 134


>gi|240145918|ref|ZP_04744519.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
           L1-82]
 gi|257201983|gb|EEV00268.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
           L1-82]
          Length = 435

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  +C +C     +   +G V S K  E  L  I+   KS   EV+ TG
Sbjct: 143 HTRAFIKVQDGCNQFCSYCI----IPFARGRVRSRK-MEDVLNEIKGLAKSGYKEVVLTG 197

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                  + + + L  +++ +  I+ ++ +R  S    ++P+ +  +  + L E  K   
Sbjct: 198 IHLSSYGVDTGETLLSLIEHVHEIEGIERIRLGS----LEPRIVTEDFAKRLSELTK--- 250

Query: 209 IAIHA 213
           I  H 
Sbjct: 251 ICPHF 255


>gi|210622341|ref|ZP_03293110.1| hypothetical protein CLOHIR_01058 [Clostridium hiranonis DSM 13275]
 gi|210154329|gb|EEA85335.1| hypothetical protein CLOHIR_01058 [Clostridium hiranonis DSM 13275]
          Length = 442

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 36/153 (23%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C   C FCF  ++    + T+    D ++ L+++Q       V  T      +S + ++
Sbjct: 93  SCRNKCMFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FVTLT-----NMSEQDIE 142

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
            +++    I  +  +  H+     +P+         L++      +         F+   
Sbjct: 143 DIIR--YRISPIN-ISVHT----TNPE---------LRQR-----MIT-----NRFAGRL 176

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
            + + RLA AGI +  Q VL  G+ND  E+   
Sbjct: 177 YSIMERLAEAGITMNCQIVLCPGVNDGKELERT 209


>gi|168213395|ref|ZP_02639020.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens CPE str. F4969]
 gi|170715134|gb|EDT27316.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens CPE str. F4969]
          Length = 473

 Score = 44.3 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +      K   L+ +     +  ++        +  G DP+   
Sbjct: 91  LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150

Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
              L  +L  ++ I  ++     +R   R+ +        E  + LK+            
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVEDYKRLKDAEIGTYILFQET 203

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
             KP Y  +H + P         A+ R   AGI  +   V L G+ D   E LA LM   
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262

Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
                  + P+ L  P       +       + +  E+ +KIVA L+     L  P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312


>gi|168211864|ref|ZP_02637489.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens B str. ATCC 3626]
 gi|170710191|gb|EDT22373.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens B str. ATCC 3626]
          Length = 473

 Score = 44.3 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +      K   L+ +     +  ++        +  G DP+   
Sbjct: 91  LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150

Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
              L  +L  ++ I  ++     +R   R+ +        E  + LK+            
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
             KP Y  +H + P         A+ R   AGI  +   V L G+ D   E LA LM   
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262

Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
                  + P+ L  P       +       + +  E+ +KIVA L+     L  P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312


>gi|78355553|ref|YP_387002.1| hypothetical protein Dde_0506 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|123727796|sp|Q315T9|RIMO_DESDG RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|78217958|gb|ABB37307.1| SSU ribosomal protein S12P methylthiotransferase [Desulfovibrio
           desulfuricans subsp. desulfuricans str. G20]
          Length = 430

 Score = 44.3 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 16/162 (9%)

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            +++  PE     +G   H P   ++   P    LK+   C   C FC    +   + G 
Sbjct: 105 RDMDAWPEMIGRALGVAVHVPPVRLLSTGPSYAYLKVSDGCGHNCSFCT---IPSIRGGL 161

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILR 179
           V +  D   A A       + E+IF   D             L+ +L  L  +  ++ LR
Sbjct: 162 VSTPADVLEAEAVNLLSRGVKELIFVAQDVAAYGRDMGLRHGLRSLLDRLLPLDGLERLR 221

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVY----IAIHANHPY 217
                  + P  ++  L++ L++AGKP      I +   HP 
Sbjct: 222 L----MYLYPAGLDAGLLRYLRDAGKPFVPYFDIPVQHAHPD 259


>gi|297244007|ref|ZP_06927897.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A8796]
 gi|297178785|gb|EFH38030.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A8796]
          Length = 340

 Score = 44.3 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
           L +   C   C +C  +E+ G     +  ++    D  A +A +  +  + ++  TGG+P
Sbjct: 18  LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
           L+     L  ++  L  I  ++ +                     R   V    I+  L 
Sbjct: 78  LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           Q +                   +   +  I    + G+ +    V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175


>gi|296275048|ref|ZP_06857555.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus MR1]
          Length = 340

 Score = 44.3 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
           L +   C   C +C  +E+ G     +  ++    D  A +A +  +  + ++  TGG+P
Sbjct: 18  LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
           L+     L  ++  L  I  ++ +                     R   V    I+  L 
Sbjct: 78  LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           Q +                   +   +  I    + G+ +    V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175


>gi|296331307|ref|ZP_06873779.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305676293|ref|YP_003867965.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296151422|gb|EFG92299.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305414537|gb|ADM39656.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 341

 Score = 44.3 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 66/173 (38%), Gaps = 39/173 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C   E+ G       K  +LS ++ E        +  + ++  TGG+
Sbjct: 21  ISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGE 80

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYI 209
           PL+     + +++K L  I  V+ +      S +P+           + LKEAG K V I
Sbjct: 81  PLMRKD--MPELIKKLARIPGVRDIAMTTNGSLLPVY---------AERLKEAGLKRVTI 129

Query: 210 AIHANHPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGIN 248
           ++         +E               +  I     AG+ +    V+ KG+N
Sbjct: 130 SL-----DSLEDERFKKINGRGVSVSKVLEGIEAAKQAGLGVKINMVVQKGVN 177


>gi|258422713|ref|ZP_05685618.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9635]
 gi|257847124|gb|EEV71133.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9635]
          Length = 340

 Score = 44.3 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
           L +   C   C +C  +E+ G     +  ++    D  A +A +  +  + ++  TGG+P
Sbjct: 18  LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
           L+     L  ++  L  I  ++ +                     R   V    I+  L 
Sbjct: 78  LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           Q +                   +   +  I    + G+ +    V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175


>gi|109157586|pdb|2FB2|A Chain A, Structure Of The Moaa Arg17266268ALA TRIPLE MUTANT
 gi|109157587|pdb|2FB2|B Chain B, Structure Of The Moaa Arg17266268ALA TRIPLE MUTANT
          Length = 340

 Score = 44.3 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
           L +   C   C +C  +E+ G     +  ++    D  A +A +  +  + ++  TGG+P
Sbjct: 18  LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
           L+     L  ++  L  I  ++ +                     R   V    I+  L 
Sbjct: 78  LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           Q +                   +   +  I    + G+ +    V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175


>gi|49484483|ref|YP_041707.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257423751|ref|ZP_05600180.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257426429|ref|ZP_05602831.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257429068|ref|ZP_05605455.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257431715|ref|ZP_05608078.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257434675|ref|ZP_05610726.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus M876]
 gi|282902170|ref|ZP_06310063.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus C160]
 gi|282906610|ref|ZP_06314458.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282909580|ref|ZP_06317391.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282911828|ref|ZP_06319624.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282915116|ref|ZP_06322893.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus M899]
 gi|282920843|ref|ZP_06328561.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus C427]
 gi|282925748|ref|ZP_06333396.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus C101]
 gi|283959046|ref|ZP_06376487.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|293497520|ref|ZP_06665374.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293511095|ref|ZP_06669792.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus M809]
 gi|293549701|ref|ZP_06672373.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus M1015]
 gi|295428850|ref|ZP_06821474.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|81650568|sp|Q6GEG6|MOAA_STAAR RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|49242612|emb|CAG41333.1| putative molybdenum cofactor biosynthesis protein A [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|257272769|gb|EEV04871.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus 55/2053]
 gi|257276060|gb|EEV07511.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus 65-1322]
 gi|257279549|gb|EEV10136.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus 68-397]
 gi|257282594|gb|EEV12726.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus E1410]
 gi|257285271|gb|EEV15387.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus M876]
 gi|282312577|gb|EFB42981.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus C101]
 gi|282315258|gb|EFB45642.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus C427]
 gi|282320837|gb|EFB51171.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus M899]
 gi|282323524|gb|EFB53840.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282326559|gb|EFB56861.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282329509|gb|EFB59030.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282596629|gb|EFC01588.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus C160]
 gi|283788638|gb|EFC27465.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|290918748|gb|EFD95824.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291096451|gb|EFE26709.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291466082|gb|EFF08611.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus M809]
 gi|295127199|gb|EFG56841.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|312437321|gb|ADQ76392.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|315193523|gb|EFU23919.1| putative molybdenum cofactor biosynthesis protein A [Staphylococcus
           aureus subsp. aureus CGS00]
          Length = 340

 Score = 44.3 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
           L +   C   C +C  +E+ G     +  ++    D  A +A +  +  + ++  TGG+P
Sbjct: 18  LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
           L+     L  ++  L  I  ++ +                     R   V    I+  L 
Sbjct: 78  LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           Q +                   +   +  I    + G+ +    V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175


>gi|15925258|ref|NP_372792.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|156980583|ref|YP_001442842.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus Mu3]
 gi|255007046|ref|ZP_05145647.2| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus Mu50-omega]
 gi|24211997|sp|Q931G4|MOAA_STAAM RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|166217891|sp|A7X5J1|MOAA_STAA1 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|14248041|dbj|BAB58430.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|156722718|dbj|BAF79135.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus Mu3]
          Length = 340

 Score = 44.3 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
           L +   C   C +C  +E+ G     +  ++    D  A +A +  +  + ++  TGG+P
Sbjct: 18  LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
           L+     L  ++  L  I  ++ +                     R   V    I+  L 
Sbjct: 78  LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQELYDAGLRRINVSLDAIDDTLF 135

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           Q +                   +   +  I    + G+ +    V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175


>gi|15927848|ref|NP_375381.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus N315]
 gi|21283915|ref|NP_647003.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49487049|ref|YP_044270.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|57650853|ref|YP_187068.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus COL]
 gi|87161067|ref|YP_494854.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|88196183|ref|YP_501000.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|148268706|ref|YP_001247649.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus JH9]
 gi|150394772|ref|YP_001317447.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus JH1]
 gi|151222380|ref|YP_001333202.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|161510463|ref|YP_001576122.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus USA300_TCH1516]
 gi|253314609|ref|ZP_04837822.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus str. CF-Marseille]
 gi|253729935|ref|ZP_04864100.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|257794612|ref|ZP_05643591.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9781]
 gi|258408785|ref|ZP_05681069.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9763]
 gi|258422383|ref|ZP_05685295.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9719]
 gi|258439773|ref|ZP_05690519.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9299]
 gi|258442671|ref|ZP_05691231.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A8115]
 gi|258446630|ref|ZP_05694785.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A6300]
 gi|258450252|ref|ZP_05698344.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A6224]
 gi|258450738|ref|ZP_05698797.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A5948]
 gi|258455375|ref|ZP_05703335.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A5937]
 gi|262048529|ref|ZP_06021413.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           D30]
 gi|262052284|ref|ZP_06024488.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           930918-3]
 gi|269203899|ref|YP_003283168.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282893707|ref|ZP_06301939.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A8117]
 gi|282922136|ref|ZP_06329832.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9765]
 gi|282926815|ref|ZP_06334442.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A10102]
 gi|283767359|ref|ZP_06340274.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus H19]
 gi|284025292|ref|ZP_06379690.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus 132]
 gi|294848805|ref|ZP_06789550.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9754]
 gi|295404949|ref|ZP_06814762.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A8819]
 gi|300910930|ref|ZP_07128380.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304379453|ref|ZP_07362188.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|54037811|sp|P65389|MOAA_STAAW RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|54041471|sp|P65388|MOAA_STAAN RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|66773819|sp|P69848|MOAA_STAA8 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|81648816|sp|Q6G754|MOAA_STAAS RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|81693942|sp|Q5HDT9|MOAA_STAAC RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|123722359|sp|Q2FEM4|MOAA_STAA3 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|172049050|sp|A6QJA8|MOAA_STAAE RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|189028696|sp|A6U3Z2|MOAA_STAA2 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|189028697|sp|A5IV50|MOAA_STAA9 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|189028698|sp|A8Z366|MOAA_STAAT RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|52695872|pdb|1TV7|A Chain A, Structure Of The S-Adenosylmethionine Dependent Enzyme
           Moaa
 gi|52695873|pdb|1TV7|B Chain B, Structure Of The S-Adenosylmethionine Dependent Enzyme
           Moaa
 gi|52695874|pdb|1TV8|A Chain A, Structure Of Moaa In Complex With S-Adenosylmethionine
 gi|52695875|pdb|1TV8|B Chain B, Structure Of Moaa In Complex With S-Adenosylmethionine
 gi|109157588|pdb|2FB3|A Chain A, Structure Of Moaa In Complex With 5'-Gtp
 gi|109157589|pdb|2FB3|B Chain B, Structure Of Moaa In Complex With 5'-Gtp
 gi|13702068|dbj|BAB43360.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus N315]
 gi|21205357|dbj|BAB96051.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus MW2]
 gi|49245492|emb|CAG43969.1| putative molybdenum cofactor biosynthesis protein A [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57285039|gb|AAW37133.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus COL]
 gi|87127041|gb|ABD21555.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|87203741|gb|ABD31551.1| molybdopterin cofactor biosynthesis protein A, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|147741775|gb|ABQ50073.1| GTP cyclohydrolase subunit MoaA [Staphylococcus aureus subsp.
           aureus JH9]
 gi|149947224|gb|ABR53160.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus JH1]
 gi|150375180|dbj|BAF68440.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|160369272|gb|ABX30243.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|253726382|gb|EES95111.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus USA300_TCH959]
 gi|257788584|gb|EEV26924.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9781]
 gi|257840468|gb|EEV64928.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9763]
 gi|257841814|gb|EEV66251.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9719]
 gi|257847549|gb|EEV71551.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9299]
 gi|257851792|gb|EEV75726.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A8115]
 gi|257854698|gb|EEV77646.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A6300]
 gi|257856344|gb|EEV79253.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A6224]
 gi|257861521|gb|EEV84323.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A5948]
 gi|257862586|gb|EEV85354.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A5937]
 gi|259159803|gb|EEW44843.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           930918-3]
 gi|259163387|gb|EEW47945.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           D30]
 gi|262076189|gb|ACY12162.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282591266|gb|EFB96339.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A10102]
 gi|282593604|gb|EFB98597.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9765]
 gi|282763765|gb|EFC03893.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A8117]
 gi|283461238|gb|EFC08322.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus H19]
 gi|285817930|gb|ADC38417.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           04-02981]
 gi|294824184|gb|EFG40608.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A9754]
 gi|294969894|gb|EFG45912.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           A8819]
 gi|298695526|gb|ADI98748.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus ED133]
 gi|300887910|gb|EFK83105.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|304341985|gb|EFM07889.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|312830616|emb|CBX35458.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315129647|gb|EFT85638.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
           aureus subsp. aureus CGS03]
 gi|315198198|gb|EFU28529.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus
           aureus subsp. aureus CGS01]
 gi|329314952|gb|AEB89365.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329723623|gb|EGG60152.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus 21172]
 gi|329730314|gb|EGG66704.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus 21193]
 gi|329732017|gb|EGG68372.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus
           subsp. aureus 21189]
          Length = 340

 Score = 44.3 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
           L +   C   C +C  +E+ G     +  ++    D  A +A +  +  + ++  TGG+P
Sbjct: 18  LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
           L+     L  ++  L  I  ++ +                     R   V    I+  L 
Sbjct: 78  LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           Q +                   +   +  I    + G+ +    V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175


>gi|325262830|ref|ZP_08129566.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
 gi|324031924|gb|EGB93203.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
          Length = 440

 Score = 44.3 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 21/149 (14%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           E  D      + PL+        R  +K+   C  +C +C         +    +  D  
Sbjct: 131 EMLDINHTKEYEPLRLSKTGEHTRAYIKVQDGCNQFCSYCIIP--FARGRVRSRAKADVL 188

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRYIKHVQILRFHSRV 184
             +  + E     EV+ TG     LS         + L  +++ +  ++ ++ +R  S  
Sbjct: 189 EEVRRLAEN-GYQEVVLTGI---HLSSYGIDLEETESLLSLIRAVHEVRGIRRIRLGS-- 242

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHA 213
             ++P+ I  E +Q L    K   I  H 
Sbjct: 243 --LEPRIITEEFVQELASLEK---ICPHF 266


>gi|225375407|ref|ZP_03752628.1| hypothetical protein ROSEINA2194_01032 [Roseburia inulinivorans DSM
           16841]
 gi|225212743|gb|EEG95097.1| hypothetical protein ROSEINA2194_01032 [Roseburia inulinivorans DSM
           16841]
          Length = 438

 Score = 44.3 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  +K+   C  +C +C         +    +S+D    +  + E     E++ TG  
Sbjct: 146 HTRAFIKVQDGCNQFCSYCIIP--FARGRVRSRNSEDVIREVKRLAEH-GFREIVLTGIH 202

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                + +   L  +++ +  +  ++ +R  S    ++P+ +       L    K   I 
Sbjct: 203 LSSYGVDTGDNLLHLIREVHNVDGIERIRLGS----LEPRIVTDGFAAALAGLPK---IC 255

Query: 211 IHA 213
            H 
Sbjct: 256 PHF 258


>gi|304313911|ref|YP_003849058.1| molybdopterin cofactor biosynthesis protein A [Methanothermobacter
           marburgensis str. Marburg]
 gi|313104133|sp|Q50746|MOAA_METTM RecName: Full=Probable molybdenum cofactor biosynthesis protein A
 gi|302587370|gb|ADL57745.1| predicted molybdopterin cofactor biosynthesis protein A
           [Methanothermobacter marburgensis str. Marburg]
          Length = 305

 Score = 44.3 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 31/173 (17%)

Query: 91  HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           HR P   L + +   C V C +C R  ++ S +   +S +D E     +     + ++  
Sbjct: 7   HRRPLVSLRISVTGRCNVSCIYCHRDGILRSDEE--MSPEDIENICR-VASDLGVKKIRL 63

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +GG+PLI     + ++++ +  I   + +   +         +  +L   L++AG    +
Sbjct: 64  SGGEPLIRDD--IVEIVEKINSIG-FRDISITTNG------TLLEDLSVPLRDAGLD-RV 113

Query: 210 AIHANHPYEFSEEAIAAISR-----LANAGI---------ILLSQSVLLKGIN 248
            +  +       E    I+R        AGI          +    V+L+G+N
Sbjct: 114 NVSFDT---LKPETYRFITRKDYLERVKAGIEGAVMAGLDPVKINMVILRGVN 163


>gi|258645469|ref|ZP_05732938.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister invisus DSM
           15470]
 gi|260402822|gb|EEW96369.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister invisus DSM
           15470]
          Length = 447

 Score = 44.3 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 79/233 (33%), Gaps = 77/233 (33%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFT- 150
             R  +K+   C  YC FC     +       L S+    A+  I+   +    EV+ T 
Sbjct: 152 KTRAFIKIQEGCDNYCTFC-----IIPFARGKLKSRRQSDAVEEIRRLVEKGYREVVLTG 206

Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                 G D  +     L  ++  L  I  +  +R  S    ++   ++ ELI+ ++E  
Sbjct: 207 IHLGNYGKD--LHDGTSLSTLVTELVRIPDLLRIRLGS----IESVELSDELIRIIREEP 260

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
           K V   +H                              +  G +DD  IL  + R     
Sbjct: 261 K-VCPHLHL----------------------------PIQAG-SDD--ILKRMNR----- 283

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGG 316
                            H+R  + E ++++ +L+++I GL      I+  PG 
Sbjct: 284 -----------------HYR--LAEYKELIRNLRKEIPGLALTTDLIVGFPGE 317


>gi|256827193|ref|YP_003151152.1| MiaB-like tRNA modifying enzyme [Cryptobacterium curtum DSM 15641]
 gi|256583336|gb|ACU94470.1| MiaB-like tRNA modifying enzyme [Cryptobacterium curtum DSM 15641]
          Length = 409

 Score = 44.3 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 11/123 (8%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTG 151
           +P R+ LK+   C   C FC    +   +  +         A   Y    + + EV+ TG
Sbjct: 128 FPTRVGLKIQDGCSAACTFCI-VHVARGKAFSRPLPDVLREAHELY---DAGVREVVLTG 183

Query: 152 GD--PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
            +      ++  L KV + L  I  +  LR   R+  ++P     ELI+ L      V  
Sbjct: 184 INLGTYTSNNANLAKVAQQL--IDEMPKLRV--RISSIEPLHATDELIEVLSRQEGRVCR 239

Query: 210 AIH 212
            +H
Sbjct: 240 HLH 242


>gi|307295474|ref|ZP_07575310.1| molybdenum cofactor biosynthesis protein A [Sphingobium
           chlorophenolicum L-1]
 gi|306878513|gb|EFN09733.1| molybdenum cofactor biosynthesis protein A [Sphingobium
           chlorophenolicum L-1]
          Length = 341

 Score = 44.3 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 26/166 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + CR+C    M    K  VL+ ++          +  +  +  TGG+PL+  
Sbjct: 29  ISVTDRCDLRCRYCMAERMTFLPKDQVLTLEEIALLADLFIAR-GVRRIRLTGGEPLVRR 87

Query: 159 HKRLQKVLKTLRY-----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
              +  ++  +       +  V +    +R+          +  Q L +AG + + +++ 
Sbjct: 88  D--IVDLVHRIGRHVGKGLDEVTLTTNGTRL---------AQHAQALADAGVRRINVSMD 136

Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
           +  P  F+              +     AG+ +    V LKGIN+D
Sbjct: 137 SRDPDRFAHVTRNGDIRLVFEGLEAAQAAGLAVKINMVALKGINED 182


>gi|78043007|ref|YP_359644.1| tungsten-containing aldehyde ferredoxin oxidoreductase cofactor
           modifying protein [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995122|gb|ABB14021.1| tungsten-containing aldehyde ferredoxin oxidoreductase cofactor
           modifying protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 365

 Score = 44.3 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 10/90 (11%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            P   I   Y     L+L  +C + CR C+R     S KG ++  K  E  L   +    
Sbjct: 13  EPQPDIQEIY-----LELSGLCNLNCRHCYRN--SWSYKGGLMERKTWEKVLEDAKALPL 65

Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLRYI 172
           +  ++  G G+PL+     +++++  ++ +
Sbjct: 66  LSRIVLGGIGEPLLHP--EIKEIITNIKAM 93


>gi|42783913|ref|NP_981160.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           10987]
 gi|42739843|gb|AAS43768.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           10987]
          Length = 334

 Score = 44.3 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E  LA +     + ++  TGG+
Sbjct: 15  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LARLFVSIGVRKIRLTGGE 73

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 74  PLLRKD--LTKLIARLMKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 125

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 126 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 172


>gi|297539312|ref|YP_003675081.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylotenera sp. 301]
 gi|297258659|gb|ADI30504.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylotenera sp. 301]
          Length = 456

 Score = 44.3 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 18/124 (14%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDP 154
             L ++  C  YC FC     V         S+  EA L    + ++  + E+   G + 
Sbjct: 165 AFLSIMEGCSKYCSFC-----VVPYTRGEEVSRPFEAILTEAAQLAEQGVKEITLLGQNV 219

Query: 155 ----LILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                  +     L  +++ +  I  V+ +RF +  P    QR    LI C     K + 
Sbjct: 220 NAYRAQYNDLEADLAMLIEYIAEIPQVERIRFTTSHPNEMSQR----LIDCFANIPK-LA 274

Query: 209 IAIH 212
           + +H
Sbjct: 275 VQLH 278


>gi|257125843|ref|YP_003163957.1| radical SAM protein [Leptotrichia buccalis C-1013-b]
 gi|257049782|gb|ACV38966.1| Radical SAM domain protein [Leptotrichia buccalis C-1013-b]
          Length = 316

 Score = 44.3 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 28/189 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + L   C   C FC    +  S+K    + ++    +  I  K+   ++ FT G+PL   
Sbjct: 9   ISLTEKCNYRCFFCHEEGLDMSKKRISKTKEEVYDLIE-IALKNGYNDLTFTDGEPLT-K 66

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--GKPVYIAIH---- 212
            K +Q   K L + K    +       + +   ++ EL++C+ +        I++H    
Sbjct: 67  KKDIQWYFKKLDHKKMYPDITI-----VTNGFLMDDELLECVSKYKGNFKFNISLHSLNP 121

Query: 213 ------------ANHPYEFSEEAIAAISRLANAGIILLS---QSVLLKGINDDPEILANL 257
                        N            +  +  A +  L+     VLLKGIN   + +  +
Sbjct: 122 EDYEKIICLAENLNSEKVMDVRFKKVVENIRKAKLRNLNIKLNFVLLKGINTGKDKIREI 181

Query: 258 MRTFVELRI 266
           +   ++  I
Sbjct: 182 LEFALQNNI 190


>gi|20808722|ref|NP_623893.1| Fe-S oxidoreductase [Thermoanaerobacter tengcongensis MB4]
 gi|20517363|gb|AAM25497.1| predicted Fe-S oxidoreductases [Thermoanaerobacter tengcongensis
           MB4]
          Length = 475

 Score = 44.3 bits (104), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/126 (13%), Positives = 49/126 (38%), Gaps = 17/126 (13%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGD 153
           +++++ + + C   C++C+            +   + +  + Y  +    I+ +   GG+
Sbjct: 86  EKLVIIVTNNCNCRCKYCYANGGSYGLDVNNMKRDEAKNIIDYFVKNFRVIYNIQIFGGE 145

Query: 154 PLILSH--KRLQKVLKTLRY------IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           P++     K + +  + LR       +    I+   + +P         E I  +K+   
Sbjct: 146 PMLNYDVIKVICEYFENLRNNNIIDYMPQFGIVTNGTYLP--------SEAIDIMKKFRF 197

Query: 206 PVYIAI 211
            + I++
Sbjct: 198 NITISL 203


>gi|163783468|ref|ZP_02178459.1| Radical SAM [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881232|gb|EDP74745.1| Radical SAM [Hydrogenivirga sp. 128-5-R1-1]
          Length = 362

 Score = 44.3 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 22/126 (17%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +  + E     + D  + P  G++      ++  L + C +YC+ C+       +    L
Sbjct: 1   MLRVSEYIRKALSDEPYRPFPGVI------LIWNLTNRCNLYCKHCYSSA--NQETKGEL 52

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPL----------ILSHKRLQKVLKT---LRYIK 173
           S  +       +    ++   I +GG+PL          IL  K ++  L T   L    
Sbjct: 53  SLDEIRKVADDL-VNEKVRFAILSGGEPLLREDIYDVSAILREKGIKTYLSTNGLLINRD 111

Query: 174 HVQILR 179
           +V+++R
Sbjct: 112 NVKLIR 117


>gi|254252868|ref|ZP_04946186.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia dolosa
           AUO158]
 gi|124895477|gb|EAY69357.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia dolosa
           AUO158]
          Length = 369

 Score = 44.3 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 22/114 (19%)

Query: 77  PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFCFRREMVGSQ-- 121
           P+ D +  P + GI H  PD  L            + +   C   C +C  RE+      
Sbjct: 7   PLADVSGMPDVSGIAHV-PDGALTDTFARPLRDLRISVTDRCNFRCVYCMPREVFDKDYP 65

Query: 122 ---KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
                 +L+ ++ E           + ++  TGG+PL+   K L+ +++ L  +
Sbjct: 66  FLPHSALLAHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116


>gi|88602761|ref|YP_502939.1| radical SAM family protein [Methanospirillum hungatei JF-1]
 gi|88188223|gb|ABD41220.1| GTP cyclohydrolase subunit MoaA [Methanospirillum hungatei JF-1]
          Length = 292

 Score = 44.3 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 32/181 (17%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
           + D+   P+  +         + +   C + C +C R      +  T LS +D  A L  
Sbjct: 3   LHDSYGRPISNLR--------ISVNSGCNLRCVYCHREGETKPE--TPLSLEDIRAILD- 51

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
           +     I  V FTGG+PL+        +++ +R +             +     +   L 
Sbjct: 52  VAGNIGIRTVKFTGGEPLLRED-----IVEIIRSVPP------GIESSMTTNGTLLGSLA 100

Query: 198 QCLKEAGK-PVYIAIHANHP---YEFSE-----EAIAAISRLANAGI-ILLSQSVLLKGI 247
             L++AG   V I++ + +P      +      + +  I    +AG+  +    VLLKGI
Sbjct: 101 HDLRDAGLARVNISLDSLNPETYKSITGTGLLSDVLEGIEAARDAGLTPIKINMVLLKGI 160

Query: 248 N 248
           N
Sbjct: 161 N 161


>gi|229093829|ref|ZP_04224927.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock3-42]
 gi|228689562|gb|EEL43371.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock3-42]
          Length = 339

 Score = 44.3 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177


>gi|310827022|ref|YP_003959379.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum
           KIST612]
 gi|308738756|gb|ADO36416.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum
           KIST612]
          Length = 318

 Score = 44.3 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 30/175 (17%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R  + + + +  +C + C +C   E +   +  T LS ++ EA +        I ++  T
Sbjct: 7   RKVNYLRISITDLCNLRCVYCMPEEGVPKRRHATNLSFEEIEALVRA-GADMGIDKIRLT 65

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYI 209
           GG+PL+     L  ++K L  I  ++     +         + PE+   LK AG + V I
Sbjct: 66  GGEPLV-RAGVLD-LVKKLGAIPGIRDFAMTTNGI------LLPEMAADLKAAGLRRVNI 117

Query: 210 AIHANHPYEFSEEAIAAISRLAN-----AGI---------ILLSQSVLLKGINDD 250
           ++       F  E  A I+R        AGI          L   +VL+KG NDD
Sbjct: 118 SL-----DTFDPEKYARITRCGRLEDALAGIDAAVAAGLTPLKINTVLIKGFNDD 167


>gi|304439005|ref|ZP_07398925.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304372494|gb|EFM26080.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 288

 Score = 44.3 bits (104), Expect = 0.029,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 27/158 (17%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTG 151
           ++++    C    C FC         K      +D E        Y++E+     V    
Sbjct: 17  LIVQATVGCSYNKCDFC------SMYKDDTFHLRDLEELKVEVKEYLEERPFYKRVFIAD 70

Query: 152 GDPLILSHKRLQKVLKTLRY-IKHVQILR-FHS-RVPIVDPQRINPELIQCLKEAGKPVY 208
           GD L LS+ +L  +       +++++ +  + + +  +    R   E ++ L+E G  + 
Sbjct: 71  GDALCLSNDKLVDLCDFFAKNMENLERITSYATAKDIL----RKTDEELRELREHGIEMV 126

Query: 209 IAIHANHPYEFSEEAIA---------AISRLANAGIIL 237
              + +   E  ++            A  +   AGI +
Sbjct: 127 YVGYESGSDEILKDVNKNSTAEEYILATKKAKAAGIKV 164


>gi|281417744|ref|ZP_06248764.1| protein of unknown function DUF512 [Clostridium thermocellum JW20]
 gi|281409146|gb|EFB39404.1| protein of unknown function DUF512 [Clostridium thermocellum JW20]
          Length = 440

 Score = 44.3 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 60/182 (32%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
              C   C FCF  ++    + T+           Y ++      + F  G+ + L++  
Sbjct: 87  TKSCRNKCIFCFIDQLPKGMRETL-----------YFKDDDS--RLSFFMGNYVTLTNMS 133

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-- 219
                                            ++ + +K    P+ +++H ++P E   
Sbjct: 134 -------------------------------YDDIDRIIKYKMSPINVSVHTSNP-ELRV 161

Query: 220 -------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRI 266
                  + + +  I RL   GI + +Q VL++G+ND  E+      L+ L      + +
Sbjct: 162 YMLRNKTAGDVMDKIKRLIEGGIKVNAQIVLVRGVNDGKELDRTLKDLSALYPGLNSISV 221

Query: 267 KP 268
            P
Sbjct: 222 VP 223


>gi|256003358|ref|ZP_05428349.1| protein of unknown function DUF512 [Clostridium thermocellum DSM
           2360]
 gi|255992648|gb|EEU02739.1| protein of unknown function DUF512 [Clostridium thermocellum DSM
           2360]
 gi|316940219|gb|ADU74253.1| protein of unknown function DUF512 [Clostridium thermocellum DSM
           1313]
          Length = 440

 Score = 44.3 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 60/182 (32%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
              C   C FCF  ++    + T+           Y ++      + F  G+ + L++  
Sbjct: 87  TKSCRNKCIFCFIDQLPKGMRETL-----------YFKDDDS--RLSFFMGNYVTLTNMS 133

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-- 219
                                            ++ + +K    P+ +++H ++P E   
Sbjct: 134 -------------------------------YDDIDRIIKYKMSPINVSVHTSNP-ELRV 161

Query: 220 -------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRI 266
                  + + +  I RL   GI + +Q VL++G+ND  E+      L+ L      + +
Sbjct: 162 YMLRNKTAGDVMDKIKRLIEGGIKVNAQIVLVRGVNDGKELDRTLKDLSALYPGLNSISV 221

Query: 267 KP 268
            P
Sbjct: 222 VP 223


>gi|15790256|ref|NP_280080.1| coenzyme PQQ synthesis protein [Halobacterium sp. NRC-1]
 gi|10580720|gb|AAG19560.1| coenzyme PQQ synthesis protein [Halobacterium sp. NRC-1]
          Length = 356

 Score = 44.3 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 57/249 (22%)

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
            +P+       P  ++ ++   C + C  C           + LS+ + +  L       
Sbjct: 1   MTPVD--TSERPVVLVWEVTQACALACDHCRASARPQR-HPSELSTAEGKQLLTDAAAFG 57

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQC 199
               V+ +GGDPL            T+  ++H        R+ +  P     + P  I+ 
Sbjct: 58  DGQLVVLSGGDPLARPD--------TVELVEHGTDC--GLRMTVT-PSGTASLTPTAIEA 106

Query: 200 LKEAGKPVYIA--------IHANHPYEFSEEA------IAAISRLANAGIIL-LSQSVLL 244
           L +AG   +           H     EF  EA      + A   +   G+ L ++ +V  
Sbjct: 107 LADAGVAQFAVSIDGATPTTH----DEFRGEAGSFERTLRAARAIRELGVPLQVNTTVCA 162

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI-------VASL 297
               D  E L  +     EL +  + +           F + +  G+ +          +
Sbjct: 163 ----DTVEALPAIRDLVAELGVALWSVF----------FLVPVGRGRALDPVSPARAEEV 208

Query: 298 KEKISGLCQ 306
              + G+ +
Sbjct: 209 MAWLDGVAR 217


>gi|125973540|ref|YP_001037450.1| hypothetical protein Cthe_1025 [Clostridium thermocellum ATCC
           27405]
 gi|125713765|gb|ABN52257.1| protein of unknown function DUF512 [Clostridium thermocellum ATCC
           27405]
          Length = 445

 Score = 44.3 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 60/182 (32%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
              C   C FCF  ++    + T+           Y ++      + F  G+ + L++  
Sbjct: 92  TKSCRNKCIFCFIDQLPKGMRETL-----------YFKDDDS--RLSFFMGNYVTLTNMS 138

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-- 219
                                            ++ + +K    P+ +++H ++P E   
Sbjct: 139 -------------------------------YDDIDRIIKYKMSPINVSVHTSNP-ELRV 166

Query: 220 -------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRI 266
                  + + +  I RL   GI + +Q VL++G+ND  E+      L+ L      + +
Sbjct: 167 YMLRNKTAGDVMDKIKRLIEGGIKVNAQIVLVRGVNDGKELDRTLKDLSALYPGLNSISV 226

Query: 267 KP 268
            P
Sbjct: 227 VP 228


>gi|312622597|ref|YP_004024210.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203064|gb|ADQ46391.1| Radical SAM domain protein [Caldicellulosiruptor kronotskyensis
           2002]
          Length = 341

 Score = 44.3 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 18/154 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +    + CP  C FC ++ + G ++   L    +  E  L  I    ++ E+ + GG+  
Sbjct: 8   IFIPQYACPFNCIFCNQKTISGEKEEVSLDRIKRQIEQGLK-INLDEEV-ELAYYGGNFT 65

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIH 212
            +     +K+L+     + ++ +R  +R     P  I+ E +  LK          I   
Sbjct: 66  AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLILLKFYNVRTIELGIQSM 120

Query: 213 ANHPYEF------SEEAIAAISRLANAGIILLSQ 240
            +H          ++ +  A+  +   G +L  Q
Sbjct: 121 FDHVLNACARGHTAQHSKNAMEMIKKFGFLLGVQ 154


>gi|289423896|ref|ZP_06425689.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
 gi|289155673|gb|EFD04345.1| conserved hypothetical protein [Peptostreptococcus anaerobius
           653-L]
          Length = 442

 Score = 44.3 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 33/207 (15%), Positives = 71/207 (34%), Gaps = 40/207 (19%)

Query: 17  ANLIKKEQIDEIKEISNHYSIALTPVIANL-INPHNPNDPIARQFIPQKEELNILPEERE 75
            + +  E+I EI+++             NL +  ++      R  + + EEL+   +   
Sbjct: 79  YSQVSPEEILEIEDV-------------NLVMGTND-----RRTIVDRIEELDSNSKLST 120

Query: 76  --DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
             D +       ++   +    R  +K+   C  YC +C     +       + S++ + 
Sbjct: 121 VDDIMKVREFESIEISQNNGKTRAFIKIQDGCDRYCTYC-----IIPYARGRIRSRNIDE 175

Query: 134 ALAYI--QEKSQIWEVIFTGGDPLILSHKRLQKV-----LKTLRYIKHVQILRFHSRVPI 186
               I     +   EV+ TG           + +     +K +  I  ++ +R  S    
Sbjct: 176 IREEIITLANNGYKEVVLTGIHVASYGKDLKEDIGILDVIKAVNDIDGIERIRLSS---- 231

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHA 213
           V+P     E I  + +  K   +  H 
Sbjct: 232 VEPVLFTDEFIDEICKIDK---LVPHF 255


>gi|229159568|ref|ZP_04287582.1| dehydrogenase [Bacillus cereus R309803]
 gi|228623870|gb|EEK80682.1| dehydrogenase [Bacillus cereus R309803]
          Length = 375

 Score = 44.3 bits (104), Expect = 0.030,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L  +     L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|229171266|ref|ZP_04298856.1| dehydrogenase [Bacillus cereus MM3]
 gi|228612223|gb|EEK69455.1| dehydrogenase [Bacillus cereus MM3]
          Length = 375

 Score = 44.3 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L  +     L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|308069953|ref|YP_003871558.1| hypothetical protein PPE_03202 [Paenibacillus polymyxa E681]
 gi|305859232|gb|ADM71020.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 447

 Score = 44.3 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 60/145 (41%), Gaps = 23/145 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  LK+   C  +C FC      G     +  S+D  + +A  ++   +   E++ TG
Sbjct: 143 HTRAFLKIQDGCNNFCTFCIIPWSRG-----LSRSRDAASIIAQARQLVHAGYKEIVLTG 197

Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                 GD   + +  L  +L  L  ++ ++ +R  S    ++  +I+ +++  L  + K
Sbjct: 198 IHTGGYGD--DMDNYDLSDLLWDLEKVEGLERIRISS----IEASQIDEKMLDVLNRSTK 251

Query: 206 PVYIAIHANHPYEF-SEEAIAAISR 229
              +  H + P +   +  +  + R
Sbjct: 252 ---LVRHFHIPLQAGDDTVLKRMRR 273


>gi|170756026|ref|YP_001782588.1| RNA modification protein [Clostridium botulinum B1 str. Okra]
 gi|169121238|gb|ACA45074.1| RNA modification enzyme, MiaB family [Clostridium botulinum B1 str.
           Okra]
          Length = 432

 Score = 44.3 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%)

Query: 90  VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145
           +  Y D  R  LK+   C  +C +C    ++   +G V S K       +  + +     
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189

Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           E+I +G D             L  +L+ +  ++ ++ +R  S    +DP     E I  +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGS----IDPTFFTEEEIIRI 245

Query: 201 KEAGKPVYIAIHA 213
            +  +      H 
Sbjct: 246 SKLKR---FCPHF 255


>gi|153939005|ref|YP_001392232.1| RNA modification protein [Clostridium botulinum F str. Langeland]
 gi|152934901|gb|ABS40399.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
           Langeland]
 gi|295320230|gb|ADG00608.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
           230613]
          Length = 432

 Score = 44.3 bits (104), Expect = 0.031,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%)

Query: 90  VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145
           +  Y D  R  LK+   C  +C +C    ++   +G V S K       +  + +     
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189

Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           E+I +G D             L  +L+ +  ++ ++ +R  S    +DP     E I  +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGS----IDPTFFTEEEIIRI 245

Query: 201 KEAGKPVYIAIHA 213
            +  +      H 
Sbjct: 246 SKLKR---FCPHF 255


>gi|225028013|ref|ZP_03717205.1| hypothetical protein EUBHAL_02282 [Eubacterium hallii DSM 3353]
 gi|224954727|gb|EEG35936.1| hypothetical protein EUBHAL_02282 [Eubacterium hallii DSM 3353]
          Length = 444

 Score = 43.9 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 65/169 (38%), Gaps = 42/169 (24%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+   H C   C FCF  +M    + T+           Y ++      + F  G+ + L
Sbjct: 83  LMDEYHSCCNKCMFCFIDQMPPGMRDTL-----------YFKDDDS--RLSFLQGNYITL 129

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           ++ R + +          +++++H     +     NPEL  + L           H    
Sbjct: 130 TNMRDKDI---------ERVIKYHLSPINISVHTTNPELRCKML-----------H---- 165

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
             F+ + +  I R   AGI + SQ VL +G+ND       L RT  +L 
Sbjct: 166 NRFAGDVLDKIGRFYEAGIRMNSQVVLCQGLND----EEELDRTISDLG 210


>gi|320115265|ref|YP_004185424.1| Radical SAM domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|319928356|gb|ADV79041.1| Radical SAM domain protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 327

 Score = 43.9 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 25/160 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +++ +   C   C FC     VG  +  +    D +  + +++  +  + +  TGG+PLI
Sbjct: 4   VIIGMTRECNGNCNFC----QVGGPQRDINKRFDYKQLVRFLKGNN--YHIQITGGEPLI 57

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-----KPVYIAI 211
              K L  +++ L+   H  ++   + + +     I+ + I+ LKE+        V I  
Sbjct: 58  -RKKELAPLIQDLKEDGH--MITLLTNLVL-----IDKKFIELLKESFSILDVVQVSIYA 109

Query: 212 HANHPYEF-----SEEAIAA-ISRLANAGIILLSQSVLLK 245
           H    +E          + A I+ L N GI L +   L K
Sbjct: 110 HNPQLHEIISGRNDWSKLNALITELINNGIQLRANLTLTK 149


>gi|229022012|ref|ZP_04178568.1| dehydrogenase [Bacillus cereus AH1272]
 gi|228739268|gb|EEL89708.1| dehydrogenase [Bacillus cereus AH1272]
          Length = 369

 Score = 43.9 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L  +     L  I     +  +  TGG+P +
Sbjct: 28  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 83

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 84  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 133

Query: 215 H 215
           H
Sbjct: 134 H 134


>gi|163939949|ref|YP_001644833.1| molybdenum cofactor biosynthesis protein A [Bacillus
           weihenstephanensis KBAB4]
 gi|163862146|gb|ABY43205.1| molybdenum cofactor biosynthesis protein A [Bacillus
           weihenstephanensis KBAB4]
          Length = 337

 Score = 43.9 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LPKLIARLTKLEGLKDIGLTTNGIHLAKQ------ARSLKEAGLKRVNISLD 128

Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
               H     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDHVFRKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175


>gi|167036843|ref|YP_001664421.1| radical SAM domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|166855677|gb|ABY94085.1| Radical SAM domain protein [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
          Length = 338

 Score = 43.9 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 25/160 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +++ +   C   C FC     VG  +  +    D +  + +++  +  + +  TGG+PLI
Sbjct: 15  VIIGMTRECNGNCNFC----QVGGPQRDINKRFDYKQLVRFLKGNN--YHIQITGGEPLI 68

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-----KPVYIAI 211
              K L  +++ L+   H  ++   + + +     I+ + I+ LKE+        V I  
Sbjct: 69  -RKKELAPLIQDLKEDGH--MITLLTNLVL-----IDKKFIELLKESFSILDVVQVSIYA 120

Query: 212 HANHPYEF-----SEEAIAA-ISRLANAGIILLSQSVLLK 245
           H    +E          + A I+ L N GI L +   L K
Sbjct: 121 HNPQLHEIISGRNDWSKLNALITELINNGIQLRANLTLTK 160


>gi|258542214|ref|YP_003187647.1| molybdenum cofactor biosynthesis protein A [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256633292|dbj|BAH99267.1| molybdenum cofactor biosynthesis protein A [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256636351|dbj|BAI02320.1| molybdenum cofactor biosynthesis protein A [Acetobacter
           pasteurianus IFO 3283-03]
 gi|256639404|dbj|BAI05366.1| molybdenum cofactor biosynthesis protein A [Acetobacter
           pasteurianus IFO 3283-07]
 gi|256642460|dbj|BAI08415.1| molybdenum cofactor biosynthesis protein A [Acetobacter
           pasteurianus IFO 3283-22]
 gi|256645515|dbj|BAI11463.1| molybdenum cofactor biosynthesis protein A [Acetobacter
           pasteurianus IFO 3283-26]
 gi|256648568|dbj|BAI14509.1| molybdenum cofactor biosynthesis protein A [Acetobacter
           pasteurianus IFO 3283-32]
 gi|256651621|dbj|BAI17555.1| molybdenum cofactor biosynthesis protein A [Acetobacter
           pasteurianus IFO 3283-01-42C]
 gi|256654612|dbj|BAI20539.1| molybdenum cofactor biosynthesis protein A [Acetobacter
           pasteurianus IFO 3283-12]
          Length = 338

 Score = 43.9 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 37/174 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C    M    +  VL+  +         +   +  +  TGG+PL+  
Sbjct: 18  VSVTDRCDMRCTYCMAERMTFLPRSDVLNYDELLRLCRVFVQH-GVRRLRITGGEPLVRR 76

Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHS-----------------RVPIVDPQRINPEL 196
                 + L   LK       ++ L   +                 R   V    ++   
Sbjct: 77  DIGPFFQELGSWLKHSDNRGQLEELTLTTNGSHLAQYAQTLFDAGVRRVNVSLDTLDEAR 136

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
              +   GK                  +  I    + G+ L   +V + G+NDD
Sbjct: 137 FAKITRRGK--------------LAATLEGIRAARDVGLALRINTVAMAGVNDD 176


>gi|294791673|ref|ZP_06756821.1| radical SAM domain protein [Veillonella sp. 6_1_27]
 gi|294456903|gb|EFG25265.1| radical SAM domain protein [Veillonella sp. 6_1_27]
          Length = 391

 Score = 43.9 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 30/167 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155
                 CP  C FC +  + G    + L+ +  +  +  Y+  +   + WEV F GG   
Sbjct: 5   FIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWEVAFYGG-SF 63

Query: 156 ILSHKRLQK-VLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
               K LQ  +L     +     +  +R  +R     P  +  E I  L+  G K V + 
Sbjct: 64  TAITKDLQHKLLMPAYEMLQQGLIDGIRCSTR-----PDAVGDEAITLLQSYGVKTVELG 118

Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           + +            H  +   E + A++RL +  + +  Q  LL G
Sbjct: 119 VQSMNDGILVDAKRGHTAQ---EVVEAVTRLKHRDMTVGVQ--LLPG 160


>gi|284048503|ref|YP_003398842.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
 gi|283952724|gb|ADB47527.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
          Length = 292

 Score = 43.9 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 5/73 (6%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDP 154
             L++   C    CRFC           +V    +    L  I++   ++  +   G DP
Sbjct: 17  CFLQVTSGCSHNKCRFCT---FYKEAPFSVSPESEIREDLQEIRDSGWKVKRIFLQGADP 73

Query: 155 LILSHKRLQKVLK 167
            +LS+ RL++++ 
Sbjct: 74  FLLSYDRLKRIMD 86


>gi|218887708|ref|YP_002437029.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218758662|gb|ACL09561.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio
           vulgaris str. 'Miyazaki F']
          Length = 427

 Score = 43.9 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 40/188 (21%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAY----IQEKSQIWEVI 148
            R+ + +   C + C +C R+    ++    ++S       AL Y    +    +I  + 
Sbjct: 23  GRVHVPVAPRCNIQCGYCNRKYDCVNESRPGVTSAVLSPRQALDYVDKVLAADPRITVIG 82

Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
             G GDP+    + L+ +   L + +H ++L   S   +  P       +  LKE G   
Sbjct: 83  IAGPGDPMANPAETLETL--RLVHERHPELLFCLSSNGLGLP-----PHLDRLKELGVTH 135

Query: 208 YIAIHANHP---------------------YEFSEEAIAA----ISRLANAGIILLSQSV 242
                 N                        E +E  +A     +  L   G+++   ++
Sbjct: 136 VTVT-INAVDPAIGEKLYSWVRDDKVVWRGREAAELLLARQLESVRGLVERGMVVKVNTI 194

Query: 243 LLKGINDD 250
           L+ G+ND 
Sbjct: 195 LVPGVNDR 202


>gi|159901008|ref|YP_001547255.1| MiaB-like tRNA modifying enzyme YliG [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|238066313|sp|A9AZS3|RIMO_HERA2 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|159894047|gb|ABX07127.1| MiaB-like tRNA modifying enzyme YliG [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 469

 Score = 43.9 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 32/189 (16%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPD-RILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
           L++ P    D +G         I          LK+   C + C FC      G  +   
Sbjct: 141 LSLTPAATGDSLGAYGDWRTTAITRNKRGPSAYLKISDGCNLRCAFCTIPSFKGDMRSKA 200

Query: 126 L------SSKDTEAALAYI---QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHV 175
           +      + +  EA +  I    +      +   G D L +    L  +L+ L   +   
Sbjct: 201 VGSILGEARELVEAGVQEIILVAQH-----LTDYGRD-LGMKQNGLGVLLEELAAVVPAD 254

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAG---KPVYIAIHANHPYEF--------SEEAI 224
           + +R         PQ + P+L++ +         V + +   HP           +++  
Sbjct: 255 RWIRL----MYAYPQSVTPDLVETMARLPQLCHYVDMPLQHAHPDTLRRMRRPPDTDKTK 310

Query: 225 AAISRLANA 233
           A ++ L  A
Sbjct: 311 AIVNSLRQA 319


>gi|229114076|ref|ZP_04243501.1| dehydrogenase [Bacillus cereus Rock1-3]
 gi|228669346|gb|EEL24763.1| dehydrogenase [Bacillus cereus Rock1-3]
          Length = 375

 Score = 43.9 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L  +     L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|86143254|ref|ZP_01061656.1| molybdenum cofactor biosynthesis protein A [Leeuwenhoekiella
           blandensis MED217]
 gi|85830159|gb|EAQ48619.1| molybdenum cofactor biosynthesis protein A [Leeuwenhoekiella
           blandensis MED217]
          Length = 335

 Score = 43.9 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 22/189 (11%)

Query: 90  VH-RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
            H R  + + + L   C + C +C   + +  S +  ++S+++ EA      E   + ++
Sbjct: 11  THGRKHNYLRISLSEKCNLRCTYCMPHDGIPLSPRANLMSAEEIEAFAKVFVEN-GVDKI 69

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KP 206
             TGG+PL+        +LK L  +  V+ L   +         +    I   K+ G K 
Sbjct: 70  RLTGGEPLVRKD--FSDILKRLAKLP-VK-LSITTNAL------LTHRFIADFKKYGLKD 119

Query: 207 VYIAIHANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGINDDPEILANLM 258
           + +++ + +  +F+              I +L   G  +   +VL+K  N+D  +    +
Sbjct: 120 INVSLDSLNAEKFNFITRRDQYKKAFTNIEQLIKEGFNVKINAVLMKNFNEDEIVEFIKL 179

Query: 259 RTFVELRIK 267
               ++ ++
Sbjct: 180 TRERDINVR 188


>gi|299144166|ref|ZP_07037246.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518651|gb|EFI42390.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 435

 Score = 43.9 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 28/130 (21%)

Query: 95  DRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
            R  +K+   C  YC +C     R  +        ++     A   Y        E+I T
Sbjct: 145 TRAYIKVQDGCNRYCTYCIIPFARGNIRSRSIEDSMNEARKLAKAGY-------KEIILT 197

Query: 151 G-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G        D   +  +RL  +++ +  I  ++ +R  S    ++P+ I  + ++ +   
Sbjct: 198 GIHIGSYGYD---IGKERLIDLIENIASIDGIERIRLSS----IEPRTITDDFMKRVVAT 250

Query: 204 GKPVYIAIHA 213
            K   +  H 
Sbjct: 251 NK---LCDHF 257


>gi|228989607|ref|ZP_04149591.1| dehydrogenase [Bacillus pseudomycoides DSM 12442]
 gi|228995795|ref|ZP_04155455.1| dehydrogenase [Bacillus mycoides Rock3-17]
 gi|229003415|ref|ZP_04161235.1| dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228757793|gb|EEM07018.1| dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228763956|gb|EEM12843.1| dehydrogenase [Bacillus mycoides Rock3-17]
 gi|228770144|gb|EEM18724.1| dehydrogenase [Bacillus pseudomycoides DSM 12442]
          Length = 410

 Score = 43.9 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L  +     L  I     +  +  TGG+P +
Sbjct: 69  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 124

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 125 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 174

Query: 215 H 215
           H
Sbjct: 175 H 175


>gi|282917614|ref|ZP_06325366.1| LOW QUALITY PROTEIN: molybdenum cofactor biosynthesis protein A
           [Staphylococcus aureus subsp. aureus D139]
 gi|282318576|gb|EFB48934.1| LOW QUALITY PROTEIN: molybdenum cofactor biosynthesis protein A
           [Staphylococcus aureus subsp. aureus D139]
          Length = 217

 Score = 43.9 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
           L +   C   C +C  +E+ G     +  ++    D  A +A +  +  + ++  TGG+P
Sbjct: 18  LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197
           L+     L  ++  L  I  ++ +                     R   V    I+  L 
Sbjct: 78  LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           Q +                   +   +  I    + G+ +    V+ KGINDD
Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175


>gi|288942731|ref|YP_003444971.1| nitrogenase cofactor biosynthesis protein NifB [Allochromatium
           vinosum DSM 180]
 gi|288898103|gb|ADC63939.1| nitrogenase cofactor biosynthesis protein NifB [Allochromatium
           vinosum DSM 180]
          Length = 500

 Score = 43.9 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 40/221 (18%), Positives = 69/221 (31%), Gaps = 65/221 (29%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGS 120
           +N  P   ED              H Y  R+ + +   C + C +C R+         G 
Sbjct: 35  VNNHPCFSEDA------------HHHYA-RMHVAVAPACNIQCHYCNRKYDCANESRPGV 81

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQ---------------- 163
               +   +  +  LA      Q+  +   G GDPL    + L+                
Sbjct: 82  VSELLTPDQAVKKVLAVAAAIPQMTVLGIAGPGDPLANPERTLETFRQLAEKAPDIRLCV 141

Query: 164 --------KVLKTLRY--IKHVQILRFHSRVPIVDP---QRINPELI--QCLKEAGKPVY 208
                    ++  L    I+HV  +  +     VDP    +I P +       +  K   
Sbjct: 142 STNGLALPDLVDELCQYNIEHV-TITIN----CVDPDVGAKIYPWIFWNNRRIKGRKAAE 196

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
           I                 + +L   G+++   SVL+ G+ND
Sbjct: 197 I---------LIRRQQEGLEKLVARGVLVKVNSVLIPGVND 228


>gi|319954255|ref|YP_004165522.1| gtp cyclohydrolase subunit moaa [Cellulophaga algicola DSM 14237]
 gi|319422915|gb|ADV50024.1| GTP cyclohydrolase subunit MoaA [Cellulophaga algicola DSM 14237]
          Length = 327

 Score = 43.9 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 55/136 (40%), Gaps = 16/136 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C   E +  ++   + +  +    L+ I     I ++  TGG+P + 
Sbjct: 15  LAVTDRCNLRCNYCMPSEGIDFAENDKLFTIDELIR-LSQILITQGITKIRITGGEPFVR 73

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
               L  +L+ L  I  ++ +   +   ++ P       I  LK  G K + +++ A   
Sbjct: 74  KD--LMVLLRELSKIDALEDISITTNATVIGPY------ISELKALGIKNINVSLDA--- 122

Query: 217 YEFSEEAIAAISRLAN 232
              +++    I+R   
Sbjct: 123 --ITKDVFEKITRRKQ 136


>gi|296132280|ref|YP_003639527.1| molybdenum cofactor biosynthesis protein A [Thermincola sp. JR]
 gi|296030858|gb|ADG81626.1| molybdenum cofactor biosynthesis protein A [Thermincola potens JR]
          Length = 326

 Score = 43.9 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 24/165 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C   C +C   E V    +  +LS ++    +     K  I ++  TGG+PL+ 
Sbjct: 14  VSVTDRCNYRCVYCMPAEGVPMHCRDEILSLEEILKVIKS-STKLGIRKIRLTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
             K +  +++ +  I  +  +   +    + P          LKEAG K V I++    P
Sbjct: 72  -RKGIINLVQGIARIPQIDDIALTTNG-ALLPA-----YATALKEAGLKRVNISLDTLKP 124

Query: 217 YEFSEEAIAAISRLAN--AGI---------ILLSQSVLLKGINDD 250
             F +     + RL +  AGI          +   +V+++G NDD
Sbjct: 125 DRFRQITR--VGRLQDVWAGIEAAWEEGFEPVKINTVVIRGFNDD 167


>gi|270294216|ref|ZP_06200418.1| radical SAM domain-containing protein [Bacteroides sp. D20]
 gi|270275683|gb|EFA21543.1| radical SAM domain-containing protein [Bacteroides sp. D20]
          Length = 292

 Score = 43.9 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           D++ + + + C   C FC         +  V++  + +  + Y++   +I E+ F+GG+P
Sbjct: 8   DKLRILVTNGCNYRCPFCHNEGQTSKDRFNVMNLDNFKLLIDYLK-DEEISEITFSGGEP 66

Query: 155 LILSH 159
            +  +
Sbjct: 67  FLNPN 71


>gi|229074347|ref|ZP_04207385.1| dehydrogenase [Bacillus cereus Rock4-18]
 gi|229095122|ref|ZP_04226117.1| dehydrogenase [Bacillus cereus Rock3-29]
 gi|229101224|ref|ZP_04231988.1| dehydrogenase [Bacillus cereus Rock3-28]
 gi|228682192|gb|EEL36305.1| dehydrogenase [Bacillus cereus Rock3-28]
 gi|228688307|gb|EEL42190.1| dehydrogenase [Bacillus cereus Rock3-29]
 gi|228708789|gb|EEL60924.1| dehydrogenase [Bacillus cereus Rock4-18]
          Length = 375

 Score = 43.9 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L  +     L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|149907724|ref|ZP_01896471.1| radical SAM domain protein [Moritella sp. PE36]
 gi|149809394|gb|EDM69323.1| radical SAM domain protein [Moritella sp. PE36]
          Length = 295

 Score = 43.9 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)

Query: 97  ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSK--DTEA-ALAYIQEKSQIWEVIFTGG 152
           ++L++ + C    C FC   +M    +    + K  D EA  L+ +    +   V    G
Sbjct: 19  LILQVANGCSWNNCTFC---DMYTQPQKKFRAKKIADIEAEILSVVASGQKHQRVFLADG 75

Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
           D + L  KRL+++L  +R  + HVQ +
Sbjct: 76  DAMTLPFKRLKEILLLIRKHMPHVQRV 102


>gi|332298374|ref|YP_004440296.1| MiaB-like tRNA modifying enzyme [Treponema brennaborense DSM 12168]
 gi|332181477|gb|AEE17165.1| MiaB-like tRNA modifying enzyme [Treponema brennaborense DSM 12168]
          Length = 515

 Score = 43.9 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 23/129 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C R  +   +  ++ ++   E  +  I+ ++Q  EV+ TG +
Sbjct: 188 HSRASIKIQDGCNNACTYC-RIHLARGKAVSLDAASVLER-VRSIEARNQ-HEVVLTGVN 244

Query: 154 ---------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                       L    L + L     + + + +RF  R+  + P+R++  L + +    
Sbjct: 245 LSQYRGSFGSFFLDIAGLLRFL-----LDNTERIRF--RLSSLYPERVDDALCEVIAHER 297

Query: 205 KPVYIAIHA 213
               I  H 
Sbjct: 298 ----IMPHF 302


>gi|304403939|ref|ZP_07385601.1| RNA modification enzyme, MiaB family [Paenibacillus curdlanolyticus
           YK9]
 gi|304346917|gb|EFM12749.1| RNA modification enzyme, MiaB family [Paenibacillus curdlanolyticus
           YK9]
          Length = 464

 Score = 43.9 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 38/168 (22%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  +C FC      G  +     S     E  +      +   E++ TG
Sbjct: 143 RTRAFLKIQEGCNNFCTFCIIPWSRGLSRSRDPKSVIAQAEQLVE-----AGYKEIVLTG 197

Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                 GD   L + RL  +L  L  ++ ++ +R  S    ++  +I+ ++I  L  + K
Sbjct: 198 IHTGGYGD--DLENYRLSDLLWDLDKVEGLERIRISS----IEASQIDDKMIDVLNRSSK 251

Query: 206 PVYIAIHANHPYEF--------------SEEAIAAISRLANA--GIIL 237
            +   +H   P +               + E    +  L  A  G+ +
Sbjct: 252 -MCRHLHI--PLQAGEDAVLKRMRRKYTTAEFAEKVKMLHRAMPGVAI 296


>gi|229083725|ref|ZP_04216046.1| dehydrogenase [Bacillus cereus Rock3-44]
 gi|228699583|gb|EEL52247.1| dehydrogenase [Bacillus cereus Rock3-44]
          Length = 375

 Score = 43.9 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L  +     L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|256423142|ref|YP_003123795.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis
           DSM 2588]
 gi|256038050|gb|ACU61594.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis
           DSM 2588]
          Length = 326

 Score = 43.9 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 65/175 (37%), Gaps = 32/175 (18%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           VH Y   + + L   C + C +C   E       + L   D  A LA I   + + ++  
Sbjct: 9   VHDY---LRISLTDNCNLRCFYCMPEEDYDFTPASRLMQADEIATLAGIFTANGVRKIRL 65

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL-----RFHSRVPIVDPQRINPELIQCLKEAG 204
           TGG+PL+       K++ +L  +     +     R H             E    L+EAG
Sbjct: 66  TGGEPLVRKDA--AKIILSLSRLPVELTMTTNGARLH-------------EFADVLEEAG 110

Query: 205 ---KPVYIAI------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                + +              +   +  + I  L N GI +    V++KG+ND+
Sbjct: 111 IRSLNISLDTLQADKFMLITRRDLFHQVKSNIDLLLNMGIRVKVNVVMMKGLNDN 165


>gi|163938411|ref|YP_001643295.1| YfkB-like domain-containing protein [Bacillus weihenstephanensis
           KBAB4]
 gi|229009905|ref|ZP_04167124.1| dehydrogenase [Bacillus mycoides DSM 2048]
 gi|163860608|gb|ABY41667.1| YfkB-like domain protein [Bacillus weihenstephanensis KBAB4]
 gi|228751336|gb|EEM01143.1| dehydrogenase [Bacillus mycoides DSM 2048]
          Length = 375

 Score = 43.9 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L  +     L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|307565379|ref|ZP_07627870.1| MiaB-like protein [Prevotella amnii CRIS 21A-A]
 gi|307345911|gb|EFN91257.1| MiaB-like protein [Prevotella amnii CRIS 21A-A]
          Length = 452

 Score = 43.9 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  +C +C      G  +   + S  K  E A+A         E++ TG
Sbjct: 158 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPPIKSLVKQAEEAVA-----EGGREIVLTG 212

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
              GD    +++    ++K L  +K ++  R  S    ++P  I+ +LI+    +     
Sbjct: 213 VNIGDFGRTTNESFLDLVKALDNVKGIERYRISS----LEPDLIDDDLIEYCATSEH--- 265

Query: 209 IAIHA 213
              H 
Sbjct: 266 FMPHF 270


>gi|227485372|ref|ZP_03915688.1| thiamine biosynthesis protein ThiH [Anaerococcus lactolyticus ATCC
           51172]
 gi|227236663|gb|EEI86678.1| thiamine biosynthesis protein ThiH [Anaerococcus lactolyticus ATCC
           51172]
          Length = 472

 Score = 43.9 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 5/117 (4%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
              E  +L   +ED + +      K + H+ Y +RI+L       + C   C +C     
Sbjct: 51  SHREAFVLLSCKEDDLNEEIFKLAKDLKHKFYANRIVLFAPLYLSNYCVNGCVYCPYHGQ 110

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
             S     LS ++ +  +  +Q++      +  G DP+      + + + T+  IKH
Sbjct: 111 NRSIPRKKLSQEEIKEQVIALQDQGHKRLALEAGEDPINNPIDYILESIHTIYNIKH 167


>gi|168211168|ref|ZP_02636793.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
           3626]
 gi|169344594|ref|ZP_02865560.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
 gi|169297204|gb|EDS79316.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495]
 gi|170710824|gb|EDT23006.1| radical SAM domain protein [Clostridium perfringens B str. ATCC
           3626]
          Length = 418

 Score = 43.9 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 8/118 (6%)

Query: 64  KEELNILPEEREDPIGDNNHSPL---KGIVHRYPDRILLKLLHVCPVYCRFCFR-REMVG 119
           KEEL  +    E+ I +         KG        + L L   C + C +C++ +  + 
Sbjct: 47  KEELKSMGFSLENNINEIELMKCTLNKGKFSEKSMTLFLSLTRQCNLNCSYCYQDKRKMM 106

Query: 120 SQKGTVLSSKDTEAALAYIQEKS-QIWEVIFT--GGDPLILSHKRLQKVLKTLRYIKH 174
            ++ + L+  D      ++++KS  + E+  T  GG+PL L+   + +++  L  +K+
Sbjct: 107 DKENSFLNKNDWFKIFEFLKKKSVNLNELHITLFGGEPL-LNKSIILQIIDDLNSLKN 163


>gi|196043992|ref|ZP_03111229.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           03BB108]
 gi|225866714|ref|YP_002752092.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           03BB102]
 gi|196025328|gb|EDX63998.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           03BB108]
 gi|225787425|gb|ACO27642.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           03BB102]
          Length = 337

 Score = 43.9 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175


>gi|118479860|ref|YP_897011.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           str. Al Hakam]
 gi|118419085|gb|ABK87504.1| GTP cyclohydrolase subunit MoaA [Bacillus thuringiensis str. Al
           Hakam]
          Length = 339

 Score = 43.9 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177


>gi|226227077|ref|YP_002761183.1| molybdenum cofactor biosynthesis protein A [Gemmatimonas aurantiaca
           T-27]
 gi|226090268|dbj|BAH38713.1| molybdenum cofactor biosynthesis protein A [Gemmatimonas aurantiaca
           T-27]
          Length = 323

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 21/173 (12%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C   C++C   E +    KG +L  ++    +  +     +  +  TGG+P I 
Sbjct: 14  ISVTDRCNFRCQYCMPVEGLPWLPKGDILRYEEIADIVGQLAPM-GLKRLRITGGEPTI- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
               L ++++ LR I  ++ +   +   +  PQ     +   L EAG   V I+  +  P
Sbjct: 72  -RPELPRLIRMLRDIPGIEDIALSTNG-VKLPQ-----MSDALAEAGLHRVNISADSLRP 124

Query: 217 YEFSEEAIA--------AISRLANAGI-ILLSQSVLLKGINDD-PEILANLMR 259
                 A          A      AGI  +    V+++GINDD     A L R
Sbjct: 125 DRVVAIARRDLGFDLKTAALAAERAGIGPIKINVVVMRGINDDEVADFAALTR 177


>gi|317051787|ref|YP_004112903.1| MiaB-like tRNA modifying enzyme [Desulfurispirillum indicum S5]
 gi|316946871|gb|ADU66347.1| MiaB-like tRNA modifying enzyme [Desulfurispirillum indicum S5]
          Length = 426

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 19/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
            +R+ LK+   C   C +C      G  +   +  +      A +       E+I TG  
Sbjct: 136 DERVNLKIQDGCDNTCSYCLVTIARGPSR--SIKMEHVLETAAELAHT--FDEIILTGVH 191

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D  +     L ++++ L  I H+  LR  S    ++P  I+  ++  L  +   
Sbjct: 192 IGSYGKD--LAEPSSLGRLMERLLEIPHLGRLRLSS----IEPAEIDETILGLL--SHPK 243

Query: 207 VYIAIHAN 214
           +   +H +
Sbjct: 244 LCRHLHIS 251


>gi|228917377|ref|ZP_04080930.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228842304|gb|EEM87399.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 339

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177


>gi|229124294|ref|ZP_04253485.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           95/8201]
 gi|228659195|gb|EEL14844.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           95/8201]
          Length = 339

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177


>gi|170758363|ref|YP_001788268.1| RNA modification protein [Clostridium botulinum A3 str. Loch Maree]
 gi|169405352|gb|ACA53763.1| RNA modification enzyme, MiaB family [Clostridium botulinum A3 str.
           Loch Maree]
          Length = 432

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 23/134 (17%)

Query: 90  VHRYPD--RILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           +  Y D  R  LK+   C  +C +C   F R  V S+K   +  ++ +     + +    
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKPEKI-MEEVQK----LSKH-GF 188

Query: 145 WEVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
            E+I +G D             L  +L+ +  ++ +Q +R  S    +DP     E I  
Sbjct: 189 KEIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIQRIRIGS----IDPTFFTEEEIMR 244

Query: 200 LKEAGKPVYIAIHA 213
           + +  +      H 
Sbjct: 245 ISKLKR---FCPHF 255


>gi|196040891|ref|ZP_03108189.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           NVH0597-99]
 gi|301056234|ref|YP_003794445.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis CI]
 gi|196028345|gb|EDX66954.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           NVH0597-99]
 gi|300378403|gb|ADK07307.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus biovar
           anthracis str. CI]
          Length = 337

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175


>gi|167633892|ref|ZP_02392215.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0442]
 gi|170685934|ref|ZP_02877157.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0465]
 gi|254687534|ref|ZP_05151390.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           CNEVA-9066]
 gi|254725099|ref|ZP_05186882.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A1055]
 gi|254741872|ref|ZP_05199559.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Kruger B]
 gi|167530693|gb|EDR93395.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0442]
 gi|170670398|gb|EDT21138.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           A0465]
          Length = 337

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175


>gi|196032982|ref|ZP_03100395.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W]
 gi|218905955|ref|YP_002453789.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
 gi|195994411|gb|EDX58366.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W]
 gi|218538708|gb|ACK91106.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820]
          Length = 337

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175


>gi|153816459|ref|ZP_01969127.1| hypothetical protein RUMTOR_02712 [Ruminococcus torques ATCC 27756]
 gi|331087554|ref|ZP_08336485.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Lachnospiraceae bacterium 3_1_46FAA]
 gi|145846201|gb|EDK23119.1| hypothetical protein RUMTOR_02712 [Ruminococcus torques ATCC 27756]
 gi|330400694|gb|EGG80298.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Lachnospiraceae bacterium 3_1_46FAA]
          Length = 483

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 66/158 (41%), Gaps = 32/158 (20%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           + I   +  D I ++  S       +YP +  + ++  C  +C +C     +        
Sbjct: 167 MVIDIWKDTDKIVEDLPS-----ERKYPFKSGVNIMFGCNNFCSYC-----IVPYVRGRE 216

Query: 127 SSKDTEAALAYIQEKSQ--IWEVIFTGGD----------PLILSHKRLQKVLKTLRYIKH 174
            S+D +A +  I+  ++  + EV+  G +          P+        ++L+ +  I  
Sbjct: 217 RSRDPKAIIREIERLAEDGVVEVMLLGQNVNSYGKTLEHPMTF-----AQLLREIEKIDK 271

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           ++ +RF +      P+ ++ ELI+ + ++ K +   +H
Sbjct: 272 IERIRFMTSH----PKDLSDELIEVMAQS-KKICRHLH 304


>gi|77919453|ref|YP_357268.1| putative MiaB-like tRNA modifying enzyme [Pelobacter carbinolicus
           DSM 2380]
 gi|77545536|gb|ABA89098.1| putative MiaB-like tRNA modifying enzyme [Pelobacter carbinolicus
           DSM 2380]
          Length = 432

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 53/142 (37%), Gaps = 16/142 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFT-- 150
             R  +++ + C  +C +C      G  + + L  +  +    +      +I        
Sbjct: 138 RSRAFVQIQNGCNAFCSYCIIPHARGPSR-SALPQQVVDQVCKFCTAGFPEIVLTGIHIG 196

Query: 151 --GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
             G D  +     L  +++ L     V  LR  S    ++PQ ++ ELI  +    +   
Sbjct: 197 GYGND--LQPPLSLADLVRRLLDDTQVSRLRLGS----IEPQEVSMELIDLVAHCER--- 247

Query: 209 IAIHANHPYEF-SEEAIAAISR 229
           +  H + P +   +  + A++R
Sbjct: 248 LCPHFHIPLQAGDDAVLKAMNR 269


>gi|49478739|ref|YP_038771.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|228936036|ref|ZP_04098846.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|49330295|gb|AAT60941.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|228823804|gb|EEM69626.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 339

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177


>gi|52140778|ref|YP_086052.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
 gi|51974247|gb|AAU15797.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L]
          Length = 337

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175


>gi|306821751|ref|ZP_07455347.1| molybdenum cofactor biosynthesis protein A [Eubacterium yurii
           subsp. margaretiae ATCC 43715]
 gi|304550220|gb|EFM38215.1| molybdenum cofactor biosynthesis protein A [Eubacterium yurii
           subsp. margaretiae ATCC 43715]
          Length = 145

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 8/93 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREM--VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           + L L   C + C +C  +    V  QK  ++S  +      Y+ +   I  +  TGG+P
Sbjct: 12  VRLSLTDRCNLNCVYCMPKGQSPVFLQKDEIMSVDEIYKICLYLSK-IGIDTIKLTGGEP 70

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF---HSRV 184
           L+      ++V+K ++ I  ++ +      +R+
Sbjct: 71  LLRED--FEEVVKKIKTIDEIKNITLTTNGTRL 101


>gi|229013933|ref|ZP_04171059.1| Molybdenum cofactor biosynthesis protein A [Bacillus mycoides DSM
           2048]
 gi|228747353|gb|EEL97230.1| Molybdenum cofactor biosynthesis protein A [Bacillus mycoides DSM
           2048]
          Length = 339

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C + C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K+++ L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 177


>gi|229062411|ref|ZP_04199727.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH603]
 gi|228716882|gb|EEL68569.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH603]
          Length = 339

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C + C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K+++ L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 177


>gi|229135567|ref|ZP_04264350.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-ST196]
 gi|228647909|gb|EEL03961.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-ST196]
          Length = 339

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C + C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K+++ L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 177


>gi|229169460|ref|ZP_04297166.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621]
 gi|228614018|gb|EEK71137.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621]
          Length = 339

 Score = 43.9 bits (103), Expect = 0.036,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C + C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K+++ L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 177


>gi|294501748|ref|YP_003565448.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium QM
           B1551]
 gi|294351685|gb|ADE72014.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium QM
           B1551]
          Length = 338

 Score = 43.9 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 8/89 (8%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           L +   C   CR+C   E+ G+         +LS  + E     +     + +V  TGG+
Sbjct: 18  LSVTDRCNFRCRYCMPEEIFGADYPFLPAENILSFDELERLTR-LFALLGVKKVRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           PL+   K L  ++  L+ I+ +  +   +
Sbjct: 77  PLL--RKGLPDLINRLKQIEGIDDIAITT 103


>gi|229056258|ref|ZP_04195679.1| dehydrogenase [Bacillus cereus AH603]
 gi|229165420|ref|ZP_04293204.1| dehydrogenase [Bacillus cereus AH621]
 gi|228618018|gb|EEK75059.1| dehydrogenase [Bacillus cereus AH621]
 gi|228721063|gb|EEL72601.1| dehydrogenase [Bacillus cereus AH603]
          Length = 369

 Score = 43.9 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L  +     L  I     +  +  TGG+P +
Sbjct: 28  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 83

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 84  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 133

Query: 215 H 215
           H
Sbjct: 134 H 134


>gi|145631425|ref|ZP_01787195.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021]
 gi|144982962|gb|EDJ90471.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021]
          Length = 41

 Score = 43.9 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 15/36 (41%)

Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320
           ++  E  +I  +L+   SG   P    ++ G   K 
Sbjct: 2   ISDIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 37


>gi|119962194|ref|YP_947341.1| molybdenum cofactor biosynthesis protein A [Arthrobacter aurescens
           TC1]
 gi|119949053|gb|ABM07964.1| molybdopterin cofactor synthesis protein A [Arthrobacter aurescens
           TC1]
          Length = 379

 Score = 43.9 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 73/190 (38%), Gaps = 36/190 (18%)

Query: 88  GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           G+  RY  R     L L   C + C +C   E +    K  V++  +    +        
Sbjct: 36  GLWDRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLSKQAVMTKDEIVRIVRVGVNALG 95

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELI 197
           + E+  TGG+PL+ +   L +++  +R   H              P  +        +  
Sbjct: 96  VRELRLTGGEPLVRAD--LVEIIAGIRS-DHPD-----------LPISMTTNGVGLDKKA 141

Query: 198 QCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGI 247
           Q LK AG   + +++ + H   F++           AG+          +   +VL++GI
Sbjct: 142 QALKAAGLTRINVSLDSLHEETFTKLTRRPFLDRVLAGVDAAWAAGLGPVKLNAVLMRGI 201

Query: 248 ND--DPEILA 255
           ND   P++LA
Sbjct: 202 NDAESPDLLA 211


>gi|154504516|ref|ZP_02041254.1| hypothetical protein RUMGNA_02020 [Ruminococcus gnavus ATCC 29149]
 gi|153794998|gb|EDN77418.1| hypothetical protein RUMGNA_02020 [Ruminococcus gnavus ATCC 29149]
          Length = 430

 Score = 43.9 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152
             R  +K+   C  +C +C      G  +    + +D  A +  + +     EV+ TG  
Sbjct: 142 HTRAYIKVQDGCNQFCSYCIIPYARGRVRSR--AKEDVVAEVTDLAKN-GYQEVVLTGIH 198

Query: 153 ------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D    +   L  +++ +  I+ ++ +R  S    ++P+ I  E +Q +    K 
Sbjct: 199 LSSYGID--FENEDNLLSLIRAVHEIEGIKRIRLGS----LEPRIITEEFVQAIAALPK- 251

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 252 --MCPHF 256


>gi|328766119|gb|EGF76180.1| hypothetical protein BATDEDRAFT_28746 [Batrachochytrium dendrobatidis
            JAM81]
          Length = 1450

 Score = 43.9 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 57/316 (18%), Positives = 114/316 (36%), Gaps = 77/316 (24%)

Query: 46   LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL-----LK 100
            LI+   P D +A Q     ++L I        IG    + L    H Y  RI+     + 
Sbjct: 1085 LISKSAPTD-LALQ---LADDLGITA------IGFARGNRLNIYTHPY--RIIEANLRIS 1132

Query: 101  LLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
            ++  C   C +C     F R+ V   K  +LS ++ E       E   I ++  TGG+PL
Sbjct: 1133 VIDRCNFRCTYCMPKEIFGRDFVFMPKDQLLSFEEIERLAKNFVE-LGIRKIRLTGGEPL 1191

Query: 156  ILSHKRLQKVLKTLRYIKHVQILRFHS------------------RVPIVDPQRINPELI 197
            +     L  +++ L  +K ++ +   +                  R+ +     ++  + 
Sbjct: 1192 LRRD--LPILIERLTRMKDLEDIALTTNGSLLGALASKLKDAGLDRINVSL-DALDDAIF 1248

Query: 198  QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
            + + ++G           P       +  I +    G+ +    V+ KG+ND    +  +
Sbjct: 1249 KKINDSGVG---------PERI----LRGIKKAHAVGLEVKVNMVVKKGMNDS--QIVPM 1293

Query: 258  MRTFVELRIKPYYLHHPDLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILDLPGG 316
               F E  I   Y+   D    T+ +  + +   ++I+  LK          + L+    
Sbjct: 1294 ANYFKENGITLRYIEFMD-VGQTNGWDFSKVITKKEIIEKLKGN--------FALE---- 1340

Query: 317  YGKVKIDTHNIKKVGN 332
                 ++ + I +V  
Sbjct: 1341 ----PVEPNYIGEVAK 1352


>gi|304406819|ref|ZP_07388474.1| molybdenum cofactor biosynthesis protein A [Paenibacillus
           curdlanolyticus YK9]
 gi|304344352|gb|EFM10191.1| molybdenum cofactor biosynthesis protein A [Paenibacillus
           curdlanolyticus YK9]
          Length = 333

 Score = 43.9 bits (103), Expect = 0.037,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 23/174 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   + + +   C + C +C   E V       +LS       +        + +
Sbjct: 9   GRVHNY---LRISVTDRCNLRCVYCMPEEGVQFTDTSNLLSYDHIVELVQS-AASLGVTK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           +  TGG+PL+     L  ++  L  I  +  +   +   ++  Q       + L+ AG  
Sbjct: 65  LRITGGEPLV--RPGLDGLISRLSRIPGISDIALTTNGLLLAQQ------AEALRAAGLN 116

Query: 207 -VYIAIHANHPYEF-----SEEAIAAISRLANAGI----ILLSQSVLLKGINDD 250
            V I++       F       E    +  +  AG      +    VLL+G+N+D
Sbjct: 117 RVNISLDTLDSTRFKFIARRGELRRVMEGIEAAGRVGFDPIKLNCVLLRGVNED 170


>gi|313226405|emb|CBY21549.1| unnamed protein product [Oikopleura dioica]
          Length = 347

 Score = 43.9 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 68/166 (40%), Gaps = 21/166 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + CR+C   E V  +    +LS+++     + + + + + ++  TGG+PL+ 
Sbjct: 25  ISLTEKCNLRCRYCMPIEGVKLTPSDQLLSAQELYRFSSLLVKNAGVQKIRLTGGEPLV- 83

Query: 158 SHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY------- 208
             + +Q+++  L  +    V+ +   +    +  ++      + L++AG           
Sbjct: 84  -RREIQEIISDLNSLRDDGVKQIGITTNGVALSKRK-----AKRLRDAGLDTANISLDTL 137

Query: 209 --IAIHANHPYE--FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
             +                + AI    +AGI      VL +G+NDD
Sbjct: 138 EPMKAEFITRRSKDMHYSVMKAIENSIDAGITTKINCVLQRGLNDD 183


>gi|281357638|ref|ZP_06244125.1| Radical SAM domain protein [Victivallis vadensis ATCC BAA-548]
 gi|281315895|gb|EFA99921.1| Radical SAM domain protein [Victivallis vadensis ATCC BAA-548]
          Length = 482

 Score = 43.9 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 36/225 (16%), Positives = 81/225 (36%), Gaps = 42/225 (18%)

Query: 95  DRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIF 149
           +R+L   ++   +C   C +C           T L    +E A + I++ +++   +V+ 
Sbjct: 21  NRLLSIEIEFNRLCNYRCPYC-----YAGDPETELPEMSSELADSVIRQAAELGARKVVI 75

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            GG+PL+     L++ ++ +  +    +I              ++    +        V 
Sbjct: 76  LGGEPLLYP--ELERKIELVNSLGMGAEIFTNG--------ALLDEAAARMFAAHNCRVV 125

Query: 209 IAIHANHPY---------EFSEEAIAAISRLANAGI---ILLSQSVLLKGINDDPEILAN 256
           + +++  P          E  E A  A+  L  AG     + + SV+    +++ + +  
Sbjct: 126 VKLNSLDPAVQARMTGEPEALELAQRALRLLREAGCGAGRVAASSVI---CSENVDGMPA 182

Query: 257 LMRTFVELRIKPYYLHHPDLAAG----TSHFRLTIEEGQKIVASL 297
           L R   E  I PY         G      H  +     +++   +
Sbjct: 183 LWRYLREREILPY--FEMMTPQGRMLENRHLMVEPARLRQVFEEI 225


>gi|90416699|ref|ZP_01224629.1| molybdenum cofactor biosynthesis protein A [marine gamma
           proteobacterium HTCC2207]
 gi|90331452|gb|EAS46688.1| molybdenum cofactor biosynthesis protein A [marine gamma
           proteobacterium HTCC2207]
          Length = 336

 Score = 43.9 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 73/178 (41%), Gaps = 21/178 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C + C +C   EM    K  +LS ++   A     E   I ++  TGG+PLI  
Sbjct: 25  LSVTDRCNLRCTYCMAEEMTFLPKQQILSLEELRDAATAFVE-LGIRKIRLTGGEPLIRR 83

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE---AGKPVYI-AIHAN 214
              + K++ +L  +  +  L   +         + P + Q LK+   +   + + ++ A 
Sbjct: 84  D--ILKLVSSLSALPGLDELTMTTNGL------LLPTMAQPLKDAGISRLNISVDSLKAE 135

Query: 215 HPYEFS--EEAIAAISRLANAGII----LLSQSVLLKGINDDPEILANLMRTFVELRI 266
              + +   +    +  +  A  +    +   +V+L G NDD   + +L R  V+  +
Sbjct: 136 RFKQLTRVGDLSQVLEGIHAANAVGFGKIKLNAVILAGFNDD--EVIDLARFAVDNGM 191


>gi|308070036|ref|YP_003871641.1| molybdenum cofactor biosynthesis protein A [Paenibacillus polymyxa
           E681]
 gi|305859315|gb|ADM71103.1| Molybdenum cofactor biosynthesis protein A (narA protein)
           [Paenibacillus polymyxa E681]
          Length = 337

 Score = 43.9 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 25/178 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   CR+C   E+ G       K  +L+ ++    L+ I     + ++  TGG+
Sbjct: 18  ISVIDRCNFRCRYCMPEEIFGHDYPFLPKEKILTFEEITR-LSRIFVSLGVTKLRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L  ++ +L  +  V+ +   +   +  P     +    L+EAG K V +++ 
Sbjct: 77  PLLRKD--LSLLIHSLTQLDGVEDIAMTTNG-VFLP-----KYAVALREAGLKRVTVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRT 260
                     N      +  +  I   A AG+ +    V+ KG ND D   +A+  + 
Sbjct: 129 SLDDDRFRQMNGGRSSVKAVLDGIEAAAQAGMQVKINMVVQKGFNDQDIVPMADYFQK 186


>gi|115376179|ref|ZP_01463422.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
 gi|115366829|gb|EAU65821.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 441

 Score = 43.9 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 34/182 (18%)

Query: 86  LKGIVHRYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           L  +  +Y  R           +  +   C   C++C     V  +    ++ +  + AL
Sbjct: 40  LDLLALKYRTRAEQLAAFTGLHIFVVTLRCDHSCQYCQVSRQVEDRARFDMTREHADRAL 99

Query: 136 AYIQEKSQIW-EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRI 192
             + +      ++ F GG+PL L+   ++ V++    +     + L+F   V   +  R+
Sbjct: 100 DLVFQSPSPALKIEFQGGEPL-LNFGLIRHVVERALTLNQPLGRDLQF---VIATNLSRL 155

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEE------------AIAAISRLANAGIILLSQ 240
           + E++   K+ G  ++++   + P                   +  I R   A   L  Q
Sbjct: 156 SEEMLAFCKQHG--IFLSTSLDGPEALHNAQRPVRGGNSHQRTVEGIRRAREA---LGDQ 210

Query: 241 SV 242
           +V
Sbjct: 211 AV 212


>gi|83589922|ref|YP_429931.1| hypothetical protein Moth_1074 [Moorella thermoacetica ATCC 39073]
 gi|123752930|sp|Q2RJK1|RIMO_MOOTA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|83572836|gb|ABC19388.1| SSU ribosomal protein S12P methylthiotransferase [Moorella
           thermoacetica ATCC 39073]
          Length = 432

 Score = 43.9 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 11/127 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGG 152
             LK+   C   C +C    + G  +   L     EA     +   ++     +    G 
Sbjct: 143 AYLKIAEGCNNRCTYCTIPSIKGPYRSRPLEKVVAEAVSLAARGIKELVLVAQDTTAYGL 202

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAI 211
           D       RL ++L+ L  I+ ++ +R         P RI PELI+ +  E G   Y+ +
Sbjct: 203 DCY--GEYRLPELLRRLARIEGIEWVRL----LYAYPTRITPELIEVMATEPGVVPYLDL 256

Query: 212 HANHPYE 218
              H  E
Sbjct: 257 PLQHASE 263


>gi|87312365|ref|ZP_01094457.1| molybdopterin cofactor synthesis protein A [Blastopirellula marina
           DSM 3645]
 gi|87284930|gb|EAQ76872.1| molybdopterin cofactor synthesis protein A [Blastopirellula marina
           DSM 3645]
          Length = 333

 Score = 43.9 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E V  + +  +L+ ++ E  +A +     + +   TGG+PL+ 
Sbjct: 20  ISVTDRCNIRCFYCMPLENVQFKPRAELLTFEEIER-VARLAVSLGVRKFRLTGGEPLV- 77

Query: 158 SHKRLQKVLKTLRYIKHVQIL 178
              +L ++++ L  I  V+ L
Sbjct: 78  -RAQLHELIQRLAAIPGVEDL 97


>gi|228948475|ref|ZP_04110757.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228811234|gb|EEM57573.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 339

 Score = 43.9 bits (103), Expect = 0.038,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 24/166 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
                     N     ++  I  I     AG+ +    V+ KG+ND
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMND 176


>gi|330815962|ref|YP_004359667.1| Molybdenum cofactor biosynthesis protein A [Burkholderia gladioli
           BSR3]
 gi|327368355|gb|AEA59711.1| Molybdenum cofactor biosynthesis protein A [Burkholderia gladioli
           BSR3]
          Length = 370

 Score = 43.9 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 47/197 (23%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  RE+            +LS ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPREVFDKDYPFLPHSALLSLEELERTARIFVAH-GVEKIRITGGE 99

Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191
           PL+   K L+ +++ L  ++ V                    + LR    +RV +     
Sbjct: 100 PLL--RKNLEFLIERLARMETVDGRPLDLTLTTNGSLLARKARSLRDAGLTRVTVSL-DA 156

Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDD 250
           ++  L + +             N     S + +  I    +AG   L    V+ +G ND 
Sbjct: 157 LDDTLFRRM-------------NDADFASADVLEGIFAAQDAGLAPLKVNMVVKRGTND- 202

Query: 251 PEILANLMRTFVELRIK 267
              +  + R F    + 
Sbjct: 203 -AEIVPMARRFRNTGVV 218


>gi|301059397|ref|ZP_07200319.1| radical SAM domain protein [delta proteobacterium NaphS2]
 gi|300446478|gb|EFK10321.1| radical SAM domain protein [delta proteobacterium NaphS2]
          Length = 453

 Score = 43.9 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 18/185 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L     CP  C +C     +  +     + ++    + Y   K  I +  F     L+
Sbjct: 210 VCLMTSTGCPYSCHYCA-SHFLFPEF-VQRNPEEISEEILYWHNKWGIRDFSFYDDALLV 267

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIHA 213
            S K +  +L+ +    H   +RFH+   I   + I   +   L + G       +    
Sbjct: 268 SSDKHMAVLLERIA--DHNLNIRFHTPNAIHVKE-ITKSIALRLHQTGFQTIRLGLETSD 324

Query: 214 NHPY-EFS-----EEAIAAISRLANAGIILLSQ-SV-LLKGI-NDDPEILANLMRTFVEL 264
           NH            +   A+  L NAG    +Q  V ++ G+    P+ +A  +      
Sbjct: 325 NHKRWHLDKKISQGDFAHAMDHLRNAGFH-PNQIGVYIMVGLPEQSPDAVAETIHHADRW 383

Query: 265 RIKPY 269
              PY
Sbjct: 384 GGIPY 388


>gi|295090679|emb|CBK76786.1| Fe-S oxidoreductase [Clostridium cf. saccharolyticum K10]
          Length = 290

 Score = 43.9 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 27/169 (15%)

Query: 87  KGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           +GIV+R P      ++++   C    C FC    M  ++   V S  +    L   +   
Sbjct: 4   EGIVYRPPSEARSLIVQVTIGCAHNTCTFC---NMYKAKDFRVRSMDEIMEDLR--EAHD 58

Query: 143 Q----IWEVIFTGGDPLILSHKRLQKVLKTLRYI-KH-VQILRFHSRVPIVDPQRINPEL 196
                + +V    GD L+L  ++L  +L  +R +  + V++  + +   I+   R + E 
Sbjct: 59  GYGAYVQKVFLADGDALVLQTEKLLAILDAVRELFPNCVRVASYGTAQDIL---RKSEEE 115

Query: 197 IQCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGII 236
           ++ LKEAG  +      +   E          + E   A  +L   GI 
Sbjct: 116 LRQLKEAGLGIVYVGAESGDDEILREINKGVTARELKEAGQKLKRCGIQ 164


>gi|226311621|ref|YP_002771515.1| hypothetical protein BBR47_20340 [Brevibacillus brevis NBRC 100599]
 gi|226094569|dbj|BAH43011.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 452

 Score = 43.9 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 15/141 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149
             R  LK+   C  +C FC      G  +     S  +  +  +   Y++          
Sbjct: 143 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRKPESVVEQAQKLVEAGYLEIVLTGIHTGG 202

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
            G D   L    L K+L  L  ++ ++ +R  S    ++  +I  E+I+ +  + + V  
Sbjct: 203 YGED---LEDYNLAKLLIDLHQVEGLKRIRISS----IEASQITDEVIEVINNSDR-VVR 254

Query: 210 AIHANHPYEF-SEEAIAAISR 229
            +H   P +   +E +  + R
Sbjct: 255 HLHV--PLQAGDDEVLKRMRR 273


>gi|222150403|ref|YP_002559556.1| molybdenum cofactor biosynthesis protein MoaA homolog [Macrococcus
           caseolyticus JCSC5402]
 gi|222119525|dbj|BAH16860.1| molybdenum cofactor biosynthesis protein MoaA homolog [Macrococcus
           caseolyticus JCSC5402]
          Length = 336

 Score = 43.9 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 40/85 (47%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G       K  +LS ++    +A +  +  + +V  TGG+
Sbjct: 17  ISVTDRCNFRCTYCMPKEIFGDDYVFLPKDELLSFEELTR-IAKVYAQLGVKKVRITGGE 75

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+     L  +++ +  I+ ++ +
Sbjct: 76  PLLRRD--LPDLIREIHAIEGIEDI 98


>gi|221211776|ref|ZP_03584754.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans CGD1]
 gi|221167861|gb|EEE00330.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans CGD1]
          Length = 367

 Score = 43.9 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 45/195 (23%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
           L ++  C   C +C  RE+ GS    +  +     A L  I        + ++  TGG+P
Sbjct: 39  LSVIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLGRIARAFVSLGVEKIRITGGEP 98

Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
           L+   + L+ +++ L  +  V                    + LR    +RV +     +
Sbjct: 99  LL--RRHLETLIERLAALTTVDGRPVELALTTNGALLAAKARTLRDAGLTRVTVSL-DAL 155

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
           +  + + + +A  PV   +             A I     AG   +   +V+ +G NDD 
Sbjct: 156 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGANDD- 201

Query: 252 EILANLMRTFVELRI 266
             +  L+R F    +
Sbjct: 202 -QILPLVRHFRHTGV 215


>gi|83590678|ref|YP_430687.1| hypothetical protein Moth_1844 [Moorella thermoacetica ATCC 39073]
 gi|83573592|gb|ABC20144.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
          Length = 360

 Score = 43.9 bits (103), Expect = 0.039,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 30/134 (22%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160
            ++C   CRFC    + G  +G +LS ++      A +       +++  GG   +    
Sbjct: 60  TNICVNACRFCAFYRLPGDPEGYLLSREEIGRKIEATLAAGG--TQILMQGG---LHPDL 114

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
            L        +IK    +  HS  P+        E+    ++ G PV             
Sbjct: 115 DLAWFEDLFSWIKSRYPVTLHSLSPV--------EIDDLARKEGLPVI------------ 154

Query: 221 EEAIAAISRLANAG 234
                 + RL  AG
Sbjct: 155 ----EVLRRLKKAG 164


>gi|206900889|ref|YP_002250798.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dictyoglomus thermophilum
           H-6-12]
 gi|229890516|sp|B5YE40|MIAB_DICT6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|206739992|gb|ACI19050.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dictyoglomus thermophilum
           H-6-12]
          Length = 440

 Score = 43.9 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 15/108 (13%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GGDPLIL 157
            C  +C +C    + G +K      ++    + Y+  +  +   +        G D   L
Sbjct: 154 GCNNFCTYCIVPYLRGREKSR--DPEEIIREVEYLASQGVVEVTLLGQNVDSYGKD---L 208

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            +  L  +L  +  I  ++ +RF +      P+ ++ +LI+ +    K
Sbjct: 209 GNVDLADLLVEIHRIPRIKRIRFLTSH----PRDVSDKLIRVVATHPK 252


>gi|75760857|ref|ZP_00740872.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228967829|ref|ZP_04128843.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|74491671|gb|EAO54872.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|228791879|gb|EEM39467.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 339

 Score = 43.9 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E  LA +     + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDIFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177


>gi|317500218|ref|ZP_07958449.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316898389|gb|EFV20429.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 483

 Score = 43.9 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 66/158 (41%), Gaps = 32/158 (20%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           + I   +  D I ++  S       +YP +  + ++  C  +C +C     +        
Sbjct: 167 MVIDIWKDTDKIVEDLPS-----ERKYPFKSGVNIMFGCNNFCSYC-----IVPYVRGRE 216

Query: 127 SSKDTEAALAYIQEKSQ--IWEVIFTGGD----------PLILSHKRLQKVLKTLRYIKH 174
            S+D +A +  I+  ++  + EV+  G +          P+        ++L+ +  I  
Sbjct: 217 RSRDPKAIIREIERLAEDGVVEVMLLGQNVNSYGKTLEHPMTF-----AQLLREIEKIDK 271

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           ++ +RF +      P+ ++ ELI+ + ++ K +   +H
Sbjct: 272 IERIRFMTSH----PKDLSDELIEVMAQS-KKICRHLH 304


>gi|291087073|ref|ZP_06345323.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
 gi|291076389|gb|EFE13753.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
          Length = 452

 Score = 43.9 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 94  PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAY-------IQEKS 142
             R  +K+   C  +C +C     R  +       V+   +  AA  Y       I   S
Sbjct: 151 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRSMEDVVQEVEALAASGYKEIVLTGIHLSS 210

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
              +   T  +P   +   L  ++  L  I  ++ +R  S    ++P+ I  E  + L 
Sbjct: 211 YGADFKRTAENPEAAAD--LLSLIVRLDRIPGIERIRLGS----LEPRIITDEFAETLA 263


>gi|167644029|ref|YP_001681692.1| molybdenum cofactor biosynthesis protein A [Caulobacter sp. K31]
 gi|167346459|gb|ABZ69194.1| molybdenum cofactor biosynthesis protein A [Caulobacter sp. K31]
          Length = 348

 Score = 43.9 bits (103), Expect = 0.040,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 63/181 (34%), Gaps = 39/181 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-- 156
           + +   C + C +C    M    K  VLS ++ +   +       + ++  TGG+PL+  
Sbjct: 35  VSVTDRCDLRCTYCMAEHMTFLPKAEVLSLEELDRLASTFVG-LGVRKLRLTGGEPLVRK 93

Query: 157 ------------LSHKRLQKVL-----KTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQ 198
                       L+   L ++        L    H   L R   +   V    + P+L +
Sbjct: 94  GIMTLVERLSRHLATGALDELTLTTNGTQLAQ--HASDLARLGVKRINVSLDTLKPDLFR 151

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            L   G                 + +A I     AGI +   +V L+   D+ E L  L+
Sbjct: 152 KLTRGGD--------------LSKVLAGIDAALAAGIQVKINAVALRH--DNAEELPALI 195

Query: 259 R 259
           +
Sbjct: 196 Q 196


>gi|296331887|ref|ZP_06874352.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305673499|ref|YP_003865171.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
           [Bacillus subtilis subsp. spizizenii str. W23]
 gi|296150965|gb|EFG91849.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|305411743|gb|ADM36862.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
           [Bacillus subtilis subsp. spizizenii str. W23]
          Length = 373

 Score = 43.9 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 16/119 (13%)

Query: 62  PQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           P   E +      + D  GD   + ++                +C + C  C     +  
Sbjct: 9   PITPEFDPWEAYMDVDQYGDMQLTNVE-----------FTTTTLCNMRCEHCAVGYTLQP 57

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +    L     +  L  ++E  ++  +  TGG+P +LS K +++ +  L    H + +R
Sbjct: 58  KDPNALP---IDLLLKRLEEIPRLRSISITGGEP-MLSLKSVKEYVVPLLKYAHERGVR 112


>gi|289427369|ref|ZP_06429082.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
           acnes J165]
 gi|295129634|ref|YP_003580297.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
           acnes SK137]
 gi|289159299|gb|EFD07490.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
           acnes J165]
 gi|291375565|gb|ADD99419.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
           acnes SK137]
 gi|332674504|gb|AEE71320.1| conserved radical SAM superfamily protein [Propionibacterium acnes
           266]
          Length = 364

 Score = 43.9 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 17/159 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           RY   ++L     C + C +C+RR+  G +    ++    +     ++   Q   V   G
Sbjct: 4   RY---LVLWPTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEGVRTTGQPAHVQLAG 60

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKEAGKPVYI 209
           G+P  L    ++ V K +  I      R+   +     +  R++ ++I  LK     V +
Sbjct: 61  GEP-TLVPSLIEHVAKRVVEI------RWGKVTCGIQTNAARLDGDIIAMLKRHSVRVGV 113

Query: 210 AIHANHP-YEFSEEAIAA----ISRLANAGIILLSQSVL 243
           ++    P +E +  + A     +  LA+A I +   +VL
Sbjct: 114 SVDGPPPVHEKTRGSAAQTFRGLLALAHADIPVRVTTVL 152


>gi|312793341|ref|YP_004026264.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|312180481|gb|ADQ40651.1| Radical SAM domain protein [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 341

 Score = 43.9 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +    + CP  C FC ++ + G ++        +  E  L  I     + E+ + GG+  
Sbjct: 8   IFIPQYACPFNCIFCNQKTISGEKEEVSFDRIKRQIEQGLK-INPDEDV-ELAYYGGNFT 65

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
            +     +K+L+     + ++ +R  +R     P  I+ E ++ LK    K + + I   
Sbjct: 66  AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLRLLKLYNVKTIELGI--- 117

Query: 215 HPYEFSEEAIAAISR 229
                 ++ + A +R
Sbjct: 118 --QSMFDDVLNACAR 130


>gi|237750753|ref|ZP_04581233.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
 gi|229373843|gb|EEO24234.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879]
          Length = 412

 Score = 43.9 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 10/126 (7%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
           R  +K+   C   C +C    + GS      S       +  I E+S + EVI TG +  
Sbjct: 115 RAFIKIQEGCNFACSYCIIPSVRGS--ARSFSEAHILDQIK-ILEQSGVTEVILTGTNIG 171

Query: 154 PLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
              L  K  +  +++ +  I  +  +R  S    ++P +I+   ++ L+      ++ I 
Sbjct: 172 SYGLDTKTHIATLIQKIHDISGILRIRLGS----LEPSQIDSAFLEILELNKLERHLHIA 227

Query: 213 ANHPYE 218
             H  E
Sbjct: 228 LQHTSE 233


>gi|221317881|ref|ZP_03599175.1| YfkA [Bacillus subtilis subsp. subtilis str. JH642]
 gi|221322154|ref|ZP_03603448.1| YfkA [Bacillus subtilis subsp. subtilis str. SMY]
 gi|255767189|ref|NP_388677.2| Fe-S oxidoreductase, radical SAM superfamily [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|321314524|ref|YP_004206811.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
           [Bacillus subtilis BSn5]
 gi|261278024|sp|O34400|YFKA_BACSU RecName: Full=Putative protein yfkA
 gi|225184816|emb|CAB12625.2| putative Fe-S oxidoreductase, radical SAM superfamily [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|291483237|dbj|BAI84312.1| hypothetical protein BSNT_01329 [Bacillus subtilis subsp. natto
           BEST195]
 gi|320020798|gb|ADV95784.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
           [Bacillus subtilis BSn5]
          Length = 373

 Score = 43.9 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 28/157 (17%)

Query: 62  PQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           P   E +      + D  GD   + ++                +C + C  C     +  
Sbjct: 9   PITPEFDPWEAYMDVDQYGDMQLTNVE-----------FTTTTLCNMRCEHCAVGYTLQP 57

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +    L     +  L  ++E  ++  +  TGG+P +LS K +++ +  L    H + +R 
Sbjct: 58  KDPNALP---IDLLLKRLEEIPRLRSISITGGEP-MLSLKSVKEYVVPLLKYAHERGVR- 112

Query: 181 HSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
                     +IN  L   ++      P    +H +H
Sbjct: 113 ---------TQINSNLTLDIERYEWIIPYLDVLHISH 140


>gi|146282949|ref|YP_001173102.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Pseudomonas stutzeri A1501]
 gi|145571154|gb|ABP80260.1| oxygen-independent coproporphyrinogen III oxidase, putative
           [Pseudomonas stutzeri A1501]
          Length = 298

 Score = 43.9 bits (103), Expect = 0.041,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 9/87 (10%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152
           ++L + + C    C FC   EM  + +    +  + E  L  I+   +   +  V    G
Sbjct: 24  LILPVTNGCSWNACTFC---EMYTAPQKKFRARDEVE-VLEEIRRCGEQLIVQRVFLADG 79

Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
           D L+L  +RL K+L+ +R  +  VQ +
Sbjct: 80  DALVLPTRRLLKILEQIRQCLPEVQRV 106


>gi|50841594|ref|YP_054821.1| radical SAM superfamily protein [Propionibacterium acnes KPA171202]
 gi|289424485|ref|ZP_06426268.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
           acnes SK187]
 gi|50839196|gb|AAT81863.1| conserved radical SAM superfamily protein [Propionibacterium acnes
           KPA171202]
 gi|289155182|gb|EFD03864.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium
           acnes SK187]
          Length = 364

 Score = 43.6 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 17/159 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           RY   ++L     C + C +C+RR+  G +    ++    +     ++   Q   V   G
Sbjct: 4   RY---LVLWPTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEGVRTTGQPAHVQLAG 60

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKEAGKPVYI 209
           G+P  L    ++ V K +  I      R+   +     +  R++ ++I  LK     V +
Sbjct: 61  GEP-TLVPSLIEHVAKRVVEI------RWGKVTCGIQTNAARLDGDIIAMLKRHSVRVGV 113

Query: 210 AIHANHP-YEFSEEAIAA----ISRLANAGIILLSQSVL 243
           ++    P +E +  + A     +  LA+A I +   +VL
Sbjct: 114 SVDGPPPVHEKTRGSAAQTFRGLLALAHADIPVRVTTVL 152


>gi|2626813|dbj|BAA23391.1| YfkA [Bacillus subtilis]
          Length = 154

 Score = 43.6 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 28/157 (17%)

Query: 62  PQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           P   E +      + D  GD   + ++                +C + C  C     +  
Sbjct: 9   PITPEFDPWEAYMDVDQYGDMQLTNVE-----------FTTTTLCNMRCEHCAVGYTLQP 57

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
           +    L     +  L  ++E  ++  +  TGG+P +LS K +++ +  L    H + +R 
Sbjct: 58  KDPNALP---IDLLLKRLEEIPRLRSISITGGEP-MLSLKSVKEYVVPLLKYAHERGVR- 112

Query: 181 HSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
                     +IN  L   ++      P    +H +H
Sbjct: 113 ---------TQINSNLTLDIERYEWIIPYLDVLHISH 140


>gi|315925688|ref|ZP_07921897.1| radical SAM protein [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315621006|gb|EFV00978.1| radical SAM protein [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 408

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 55/160 (34%), Gaps = 37/160 (23%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R P +  + +   C   C  CFR       K   LS K+ E  +  +        V  TG
Sbjct: 80  RIPIQADIVVTGKCHCNCWHCFR----IKDKREDLSLKEIERVMGELYALGTAT-VGITG 134

Query: 152 GDPLILSHKRLQKVLK--------TLRYIKHVQILRFH--------SRVPIVDPQRINPE 195
           G+P++     ++ +LK         L    H     F         +RV +        +
Sbjct: 135 GEPMLRED--IRDILKLIPEGMEGQLYTTGHQIDKNFAEFIQSTNVTRVIVSL-DHYLED 191

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
               ++          H  H YE   EA+ AI  L ++G+
Sbjct: 192 AANAMR----------HYGHAYE---EAVKAIQCLVSSGV 218


>gi|229148819|ref|ZP_04277067.1| dehydrogenase [Bacillus cereus m1550]
 gi|228634613|gb|EEK91194.1| dehydrogenase [Bacillus cereus m1550]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|225028525|ref|ZP_03717717.1| hypothetical protein EUBHAL_02804 [Eubacterium hallii DSM 3353]
 gi|224954168|gb|EEG35377.1| hypothetical protein EUBHAL_02804 [Eubacterium hallii DSM 3353]
          Length = 450

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 28/131 (21%)

Query: 94  PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  +K+   C  +C +C     R  +       V+      AA  Y        E++ 
Sbjct: 150 HTRAYIKIQDGCNQFCSYCIIPYTRGRIRSKNPEEVIEEVKNLAAQGY-------KEIVL 202

Query: 150 TG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           TG        D   L    L  V+K ++ ++ V+ +R  S    ++P+ I  E ++ L +
Sbjct: 203 TGIHLSSYGKD---LGTVTLLDVIKRIQQVEDVERIRLGS----LEPRIITEEFVKELVK 255

Query: 203 AGKPVYIAIHA 213
             K   +  H 
Sbjct: 256 CDK---VCPHF 263


>gi|152996920|ref|YP_001341755.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinomonas sp. MWYL1]
 gi|229890562|sp|A6VZE1|MIAB_MARMS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|150837844|gb|ABR71820.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinomonas sp. MWYL1]
          Length = 451

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 13/122 (10%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFT 150
             + ++  C  YC FC     R E V     ++L    +  E  +  I        V   
Sbjct: 148 AFVSIMEGCSKYCTFCVVPYTRGEEVSRPFDSILKEVVQLAEQGVREI--HLLGQNVNAY 205

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD        L  ++  +  I  V+ +RF +  P+      +  LI+  +   K +   
Sbjct: 206 RGDTAEGDEADLADIIHAVAQIDGVERIRFTTSHPV----EFSDSLIEAFRNEPK-LVSH 260

Query: 211 IH 212
           +H
Sbjct: 261 LH 262


>gi|307266180|ref|ZP_07547723.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306918784|gb|EFN49015.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 317

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 26/166 (15%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E +       +L +++    +  I  +  I +V FTGG+PL+ 
Sbjct: 14  VSVTDRCNLRCIYCMPEEGIPKKDHNEILRNEEILKIIR-ISAELGIKKVRFTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
             K ++ ++     IK ++ +      +++          E+   LKEAG K V I++ +
Sbjct: 72  -RKGIENIIYETSKIKGIEDIALTTNGTKL---------YEMADTLKEAGLKRVNISLDS 121

Query: 214 ---NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
              +     +     ++   AI +  + G+  +   +V++K INDD
Sbjct: 122 LKKDRYRMITRLGNIDDVFRAIDKSLSIGLEPVKINTVVIKSINDD 167


>gi|228906226|ref|ZP_04070113.1| dehydrogenase [Bacillus thuringiensis IBL 200]
 gi|228853382|gb|EEM98152.1| dehydrogenase [Bacillus thuringiensis IBL 200]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|30018672|ref|NP_830303.1| thioredoxin-like oxidoreductase [Bacillus cereus ATCC 14579]
 gi|228956898|ref|ZP_04118679.1| dehydrogenase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229108087|ref|ZP_04237712.1| dehydrogenase [Bacillus cereus Rock1-15]
 gi|229125914|ref|ZP_04254939.1| dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|229143207|ref|ZP_04271639.1| dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|296501246|ref|YP_003662946.1| thioredoxin-like oxidoreductase [Bacillus thuringiensis BMB171]
 gi|29894213|gb|AAP07504.1| Thioredoxin-like oxidoreductases [Bacillus cereus ATCC 14579]
 gi|228640288|gb|EEK96686.1| dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|228657572|gb|EEL13385.1| dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|228675362|gb|EEL30581.1| dehydrogenase [Bacillus cereus Rock1-15]
 gi|228802741|gb|EEM49577.1| dehydrogenase [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|296322298|gb|ADH05226.1| thioredoxin-like oxidoreductase [Bacillus thuringiensis BMB171]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|322383639|ref|ZP_08057390.1| ribosomal protein S12 methylthiotransferase-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321151851|gb|EFX44794.1| ribosomal protein S12 methylthiotransferase-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 446

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C FC      G  +     S   + A  ++   +   E++ T   
Sbjct: 139 RTRAFLKIQEGCNNFCTFCIIPWSRGLMRSRDPKSV-VQQA--HMLVDAGYKEIVLTGIH 195

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
               G D   +    L K+L  L  +  ++ +R  S    ++  +I  E+++ L  + K 
Sbjct: 196 TGGYGED---MEDYSLAKLLWDLDKVDGLERIRISS----IEASQITDEVLEVLNASDK- 247

Query: 207 VYIAIHA 213
           +   +H 
Sbjct: 248 MCRHLHI 254


>gi|42779617|ref|NP_976864.1| hypothetical protein BCE_0537 [Bacillus cereus ATCC 10987]
 gi|206974237|ref|ZP_03235154.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217958018|ref|YP_002336562.1| hypothetical protein BCAH187_A0537 [Bacillus cereus AH187]
 gi|222094217|ref|YP_002528274.1| thioredoxin-like oxidoreductase [Bacillus cereus Q1]
 gi|229137284|ref|ZP_04265900.1| dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|229194799|ref|ZP_04321586.1| dehydrogenase [Bacillus cereus m1293]
 gi|42735533|gb|AAS39472.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
 gi|206747477|gb|EDZ58867.1| conserved hypothetical protein [Bacillus cereus H3081.97]
 gi|217065915|gb|ACJ80165.1| conserved hypothetical protein [Bacillus cereus AH187]
 gi|221238272|gb|ACM10982.1| thioredoxin-like oxidoreductase [Bacillus cereus Q1]
 gi|228588647|gb|EEK46678.1| dehydrogenase [Bacillus cereus m1293]
 gi|228646187|gb|EEL02405.1| dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|324324522|gb|ADY19782.1| thioredoxin-like oxidoreductase [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|226950381|ref|YP_002805472.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
           Kyoto]
 gi|226843573|gb|ACO86239.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
           Kyoto]
          Length = 432

 Score = 43.6 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%)

Query: 90  VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145
           +  Y D  R  LK+   C  +C +C    ++   +G V S K       +  + +     
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189

Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           E+I +G D             L  +L+ +  ++ ++ +R  S    +DP     E I  +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245

Query: 201 KEAGKPVYIAIHA 213
            +  +      H 
Sbjct: 246 SKLKR---FCPHF 255


>gi|218899882|ref|YP_002448293.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
 gi|218545891|gb|ACK98285.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842]
          Length = 337

 Score = 43.6 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 24/166 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E  LA +     + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
                   + N     ++  I  I     AG+ +    V+ KG+ND
Sbjct: 129 AIDDDIFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMND 174


>gi|148380907|ref|YP_001255448.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
           ATCC 3502]
 gi|153931336|ref|YP_001385215.1| RNA modification protein [Clostridium botulinum A str. ATCC 19397]
 gi|153937595|ref|YP_001388684.1| RNA modification protein [Clostridium botulinum A str. Hall]
 gi|148290391|emb|CAL84518.1| putative radical SAM superfamily protein [Clostridium botulinum A
           str. ATCC 3502]
 gi|152927380|gb|ABS32880.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
           ATCC 19397]
 gi|152933509|gb|ABS39008.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
           Hall]
          Length = 432

 Score = 43.6 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%)

Query: 90  VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145
           +  Y D  R  LK+   C  +C +C    ++   +G V S K       +  + +     
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189

Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           E+I +G D             L  +L+ +  ++ ++ +R  S    +DP     E I  +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245

Query: 201 KEAGKPVYIAIHA 213
            +  +      H 
Sbjct: 246 SKLKR---FCPHF 255


>gi|16080723|ref|NP_391551.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221311629|ref|ZP_03593476.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221315956|ref|ZP_03597761.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
           subsp. subtilis str. NCIB 3610]
 gi|221320868|ref|ZP_03602162.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
           subsp. subtilis str. JH642]
 gi|221325153|ref|ZP_03606447.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
           subsp. subtilis str. SMY]
 gi|730103|sp|P39757|MOAA_BACSU RecName: Full=Molybdenum cofactor biosynthesis protein A;
           Short=Protein narA
 gi|516272|emb|CAA84540.1| unknown [Bacillus subtilis subsp. subtilis str. 168]
 gi|1648856|emb|CAB03683.1| MoaA-like protein [Bacillus subtilis subsp. subtilis str. 168]
 gi|2636195|emb|CAB15687.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
           subsp. subtilis str. 168]
          Length = 341

 Score = 43.6 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 33/170 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C   E+ G       K  +LS ++ E        +  + ++  TGG+
Sbjct: 21  ISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGE 80

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP-------QRINPEL----IQC 199
           PL+     + +++K L  I  ++ +      S +P+          +R+   L     + 
Sbjct: 81  PLMRKD--MPELIKKLARIPGIRDIAMTTNGSLLPVYAKRLKEAGLKRVTISLDSLEDER 138

Query: 200 LKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
            K+  G+ V ++           + +  I     AG+ +    V+ KG+N
Sbjct: 139 FKKINGRGVSVS-----------KVLEGIEAAKQAGLGVKINMVVQKGVN 177


>gi|321313219|ref|YP_004205506.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis BSn5]
 gi|320019493|gb|ADV94479.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis BSn5]
          Length = 341

 Score = 43.6 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 33/170 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C   E+ G       K  +LS ++ E        +  + ++  TGG+
Sbjct: 21  ISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGE 80

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP-------QRINPEL----IQC 199
           PL+     + +++K L  I  ++ +      S +P+          +R+   L     + 
Sbjct: 81  PLMRKD--MPELIKKLARIPGIRDIAMTTNGSLLPVYAKRLKEAGLKRVTISLDSLEDER 138

Query: 200 LKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
            K+  G+ V ++           + +  I     AG+ +    V+ KG+N
Sbjct: 139 FKKINGRGVSVS-----------KVLEGIEAAKQAGLGVKINMVVQKGVN 177


>gi|254736837|ref|ZP_05194543.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str.
           Western North America USA6153]
          Length = 247

 Score = 43.6 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 26  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 84

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 85  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 136

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 137 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 183


>gi|291486249|dbj|BAI87324.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis
           subsp. natto BEST195]
          Length = 341

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 33/170 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C   E+ G       K  +LS ++ E        +  + ++  TGG+
Sbjct: 21  ISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGE 80

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP-------QRINPEL----IQC 199
           PL+     + +++K L  I  ++ +      S +P+          +R+   L     + 
Sbjct: 81  PLMRKD--MPELIKKLARIPGIRDIAMTTNGSLLPVYAKRLKEAGLKRVTISLDSLEDER 138

Query: 200 LKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
            K+  G+ V ++           + +  I     AG+ +    V+ KG+N
Sbjct: 139 FKKINGRGVSVS-----------KVLEGIEAAKQAGLGVKINMVVQKGVN 177


>gi|254456428|ref|ZP_05069857.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Pelagibacter
           sp. HTCC7211]
 gi|207083430|gb|EDZ60856.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Pelagibacter
           sp. HTCC7211]
          Length = 442

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 13/116 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA---YIQEKSQIWEVIF-TGGDP 154
           L +   C  +C FC     V         S+  E  L    Y+ +      V+     + 
Sbjct: 152 LTIQEGCDKFCHFC-----VVPYTRGPEYSRPLEQILDEAKYLADNGAQEIVLLGQNVNA 206

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                 +L  ++  +  I  ++ +R+ +      P+ ++ +LI+  K + K + + 
Sbjct: 207 YSYEQNKLSNLIFEIEKIPQIKRIRYTTSH----PKDMSDDLIKVYKSSKKLMPLV 258


>gi|52144823|ref|YP_082004.1| moaA/nifB/pqqE family protein [Bacillus cereus E33L]
 gi|300119045|ref|ZP_07056756.1| moaA/nifB/pqqE family protein [Bacillus cereus SJ1]
 gi|51978292|gb|AAU19842.1| probable moaA/nifB/pqqE family protein [Bacillus cereus E33L]
 gi|298723661|gb|EFI64392.1| moaA/nifB/pqqE family protein [Bacillus cereus SJ1]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|330503695|ref|YP_004380564.1| putative radical SAM protein [Pseudomonas mendocina NK-01]
 gi|328917981|gb|AEB58812.1| putative radical SAM protein [Pseudomonas mendocina NK-01]
          Length = 496

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 12/98 (12%)

Query: 83  HSPLKGIVHRYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           H+PL  +  +Y  R           L  +   C   CR+C          G  +S++  E
Sbjct: 77  HNPLPEMAAQYRSRKSFVFGGPALHLFVVTLRCNHSCRYCQVSRAPLGGAGHDMSAEHAE 136

Query: 133 AALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTL 169
            A+  + E    +  V F GG+PL L+  R+++V++ +
Sbjct: 137 YAVERLFESPSPVLTVEFQGGEPL-LAFNRIRQVVEAV 173


>gi|229028271|ref|ZP_04184407.1| dehydrogenase [Bacillus cereus AH1271]
 gi|228733035|gb|EEL83881.1| dehydrogenase [Bacillus cereus AH1271]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|229048433|ref|ZP_04194000.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
 gi|229130005|ref|ZP_04258969.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-Cer4]
 gi|229147295|ref|ZP_04275646.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-ST24]
 gi|228636196|gb|EEK92675.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-ST24]
 gi|228653449|gb|EEL09323.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           BDRD-Cer4]
 gi|228722948|gb|EEL74326.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676]
          Length = 339

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ GS         +L+  + E  LA +     + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEIFGSDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIARLVKIDGLIDIGLTTNAV-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177


>gi|229152925|ref|ZP_04281107.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1550]
 gi|228630538|gb|EEK87185.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1550]
          Length = 339

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E  LA +     + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIARLVKIDGLIDIGLTTNAV-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177


>gi|218233618|ref|YP_002369523.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264]
 gi|218161575|gb|ACK61567.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264]
          Length = 337

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E  LA +     + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LTKLIARLVKIDGLIDIGLTTNAV-----HLTKQ-AKALKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 175


>gi|218231727|ref|YP_002365264.1| hypothetical protein BCB4264_A0486 [Bacillus cereus B4264]
 gi|218159684|gb|ACK59676.1| conserved hypothetical protein [Bacillus cereus B4264]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|206967566|ref|ZP_03228522.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|228919345|ref|ZP_04082714.1| dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
 gi|229068169|ref|ZP_04201476.1| dehydrogenase [Bacillus cereus F65185]
 gi|229177006|ref|ZP_04304401.1| dehydrogenase [Bacillus cereus 172560W]
 gi|229188686|ref|ZP_04315725.1| dehydrogenase [Bacillus cereus ATCC 10876]
 gi|206736486|gb|EDZ53633.1| conserved hypothetical protein [Bacillus cereus AH1134]
 gi|228594875|gb|EEK52655.1| dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228606481|gb|EEK63907.1| dehydrogenase [Bacillus cereus 172560W]
 gi|228714983|gb|EEL66851.1| dehydrogenase [Bacillus cereus F65185]
 gi|228840281|gb|EEM85553.1| dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC
           4BD1]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|160901857|ref|YP_001567438.1| molybdenum cofactor biosynthesis protein A [Petrotoga mobilis SJ95]
 gi|189028692|sp|A9BF51|MOAA_PETMO RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|160359501|gb|ABX31115.1| molybdenum cofactor biosynthesis protein A [Petrotoga mobilis SJ95]
          Length = 323

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 94/222 (42%), Gaps = 33/222 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   + V  +  + +L  ++    +  +  +  I +V  TGG+PL+ 
Sbjct: 14  VSITDRCNLRCIYCMPPQGVTFKTHSSILRYEEIIKIVE-VGTELGIKKVRITGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
             + +  ++K LR I  ++ +   +   ++            LK AG   V I++ + +P
Sbjct: 72  -RQGVVNLIKELRKIPELEDITMTTNGVLLPKYAF------ALKRAGLSRVNISLDSLNP 124

Query: 217 ---YEFS--EEAIAAISRLANA---GI-ILLSQSVLLKGINDDP-------EILANLMRT 260
                 +   E   AI  +  A   G+  +   +V++KGIND+         I  +L   
Sbjct: 125 DTYKTITRRGEFSQAIEGIKAALEVGLNPVKINTVVMKGINDNELENFVNLTIDKDLHVR 184

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302
           F+E      Y+   + +  + ++ +++ E ++I+      + 
Sbjct: 185 FIE------YMPMGETSLLSGNYYVSLNEFKEIIIDKMGMVP 220


>gi|30022797|ref|NP_834428.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           14579]
 gi|296505191|ref|YP_003666891.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           BMB171]
 gi|29898356|gb|AAP11629.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           14579]
 gi|296326243|gb|ADH09171.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           BMB171]
          Length = 337

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ GS         +L+  + E  LA +     + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEIFGSDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LTKLIARLVKIDGLIDIGLTTNAV-----HLTKQ-AKALKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 175


>gi|228950973|ref|ZP_04113094.1| dehydrogenase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229077776|ref|ZP_04210403.1| dehydrogenase [Bacillus cereus Rock4-2]
 gi|228705504|gb|EEL57863.1| dehydrogenase [Bacillus cereus Rock4-2]
 gi|228808700|gb|EEM55198.1| dehydrogenase [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|218895539|ref|YP_002443950.1| hypothetical protein BCG9842_B4837 [Bacillus cereus G9842]
 gi|218541756|gb|ACK94150.1| conserved hypothetical protein [Bacillus cereus G9842]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|196034724|ref|ZP_03102132.1| conserved hypothetical protein [Bacillus cereus W]
 gi|228944235|ref|ZP_04106611.1| dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
 gi|195992767|gb|EDX56727.1| conserved hypothetical protein [Bacillus cereus W]
 gi|228815386|gb|EEM61631.1| dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|167462198|ref|ZP_02327287.1| RNA modification enzyme, MiaB family protein [Paenibacillus larvae
           subsp. larvae BRL-230010]
          Length = 449

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C FC      G  +     S   + A  ++   +   E++ T   
Sbjct: 142 RTRAFLKIQEGCNNFCTFCIIPWSRGLMRSRDPKSV-VQQA--HMLVDAGYKEIVLTGIH 198

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
               G D   +    L K+L  L  +  ++ +R  S    ++  +I  E+++ L  + K 
Sbjct: 199 TGGYGED---MEDYSLAKLLWDLDKVDGLERIRISS----IEASQITDEVLEVLNASDK- 250

Query: 207 VYIAIHA 213
           +   +H 
Sbjct: 251 MCRHLHI 257


>gi|118476173|ref|YP_893324.1| radical SAM superfamily oxidoreductase [Bacillus thuringiensis str.
           Al Hakam]
 gi|225862462|ref|YP_002747840.1| oxidoreductase, radical SAM superfamily [Bacillus cereus 03BB102]
 gi|118415398|gb|ABK83817.1| oxidoreductase, radical SAM superfamily [Bacillus thuringiensis
           str. Al Hakam]
 gi|225788857|gb|ACO29074.1| oxidoreductase, radical SAM superfamily [Bacillus cereus 03BB102]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|75760084|ref|ZP_00740147.1| Thioredoxin-like oxidoreductases [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228977177|ref|ZP_04137576.1| dehydrogenase [Bacillus thuringiensis Bt407]
 gi|74492434|gb|EAO55587.1| Thioredoxin-like oxidoreductases [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228782486|gb|EEM30665.1| dehydrogenase [Bacillus thuringiensis Bt407]
 gi|326938204|gb|AEA14100.1| thioredoxin-like oxidoreductase [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|47567247|ref|ZP_00237961.1| thioredoxin-like oxidoreductases [Bacillus cereus G9241]
 gi|228983679|ref|ZP_04143879.1| dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
 gi|229042322|ref|ZP_04190072.1| dehydrogenase [Bacillus cereus AH676]
 gi|47556090|gb|EAL14427.1| thioredoxin-like oxidoreductases [Bacillus cereus G9241]
 gi|228726981|gb|EEL78188.1| dehydrogenase [Bacillus cereus AH676]
 gi|228776031|gb|EEM24397.1| dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC
           4Y1]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|303233275|ref|ZP_07319947.1| ribosomal protein S12 methylthiotransferase RimO [Atopobium vaginae
           PB189-T1-4]
 gi|302480665|gb|EFL43753.1| ribosomal protein S12 methylthiotransferase RimO [Atopobium vaginae
           PB189-T1-4]
          Length = 532

 Score = 43.6 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 61/173 (35%), Gaps = 32/173 (18%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             +K+   C   C FC    + G         +D  A +  +   + I E+I  G D  I
Sbjct: 220 AFVKISEGCSRMCAFCAIPHIRGPY--ASRPPQDILAEVDML-VDAGIHEIILIGQDTGI 276

Query: 157 L-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
                   K L  +L+ + +  HV+  +   RV  + P+ + PELI  +++  + + YI 
Sbjct: 277 WGCDFKEPKTLAWLLQQVAH--HVRGKQCWIRVLYLQPEGMTPELISTIRDTPEVLPYID 334

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
           I   H  E        + R+   G                 + L  L  T   
Sbjct: 335 IPIQHCSE------QVLKRMGRTG---------------SAQELHELFATLRR 366


>gi|312200419|ref|YP_004020480.1| radical SAM domain protein [Frankia sp. EuI1c]
 gi|311231755|gb|ADP84610.1| Radical SAM domain protein [Frankia sp. EuI1c]
          Length = 428

 Score = 43.6 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 33/161 (20%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGT-------VLSSKDTEAALAYIQEKSQIW----- 145
           +LK+   C + C +C+    V S   +        +S +  E A+  I E ++       
Sbjct: 55  ILKIHSRCNLACDYCY----VYSAADSGWRRQPPRMSRRTAEQAIRRIAEHTRTHGLSQV 110

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           E++  GG+PL+     +  +   LR  I     +R  ++   V    +   L+  L E  
Sbjct: 111 EIVLHGGEPLLAGADFVGWLADELRRQIPPPVRVRIVTQTNGVA---LRAGLLDLLVERD 167

Query: 205 KPVYIA------IHANHPYEFS------EEAIAAISRLANA 233
             V ++       H  H   F+           A+  L +A
Sbjct: 168 IAVCVSLDGPSGAHDRH-RRFADGRRSYPRVREALELLTSA 207


>gi|182419316|ref|ZP_02950569.1| heme biosynthesis [Clostridium butyricum 5521]
 gi|237667748|ref|ZP_04527732.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182376956|gb|EDT74527.1| heme biosynthesis [Clostridium butyricum 5521]
 gi|237656096|gb|EEP53652.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 453

 Score = 43.6 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 12/125 (9%)

Query: 65  EELNILPE----EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +E+  L E      ED   +  HS +      Y   I L ++H C + C++CF  E    
Sbjct: 63  DEIQELAEDGILYSEDQYEEIAHSSMD--DRDYIKAICLNVIHGCNLRCKYCFADEGEYH 120

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIKH--V 175
             G V+S +  + A+ Y+ ++S      E+   GG+P  L   ++++++K  R  +    
Sbjct: 121 GHGGVMSVETAKKAIDYVIKRSGPRKNIEIDLFGGEP-TLIMDKIKEIIKYARDNEEKWG 179

Query: 176 QILRF 180
           + +RF
Sbjct: 180 KRIRF 184


>gi|160940239|ref|ZP_02087584.1| hypothetical protein CLOBOL_05128 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436819|gb|EDP14586.1| hypothetical protein CLOBOL_05128 [Clostridium bolteae ATCC
           BAA-613]
          Length = 472

 Score = 43.6 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 41/188 (21%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+           Y ++      + F  G+ + L
Sbjct: 85  LMSDYRSCSNKCIFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITL 131

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           ++ + + +          +I+R       +  Q  NP+L  + L                
Sbjct: 132 TNMKERDI---------ERIIRMQLAPINISVQTTNPQLRCKMLN--------------- 167

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
             F+ + +  +  L +  + +  Q V  K +ND  E+   +       R  P+      +
Sbjct: 168 NRFAGDKLKYLQMLYDGHVEMNGQVVCCKNVNDGAELERTIRDL---SRYLPFLRSVSVV 224

Query: 277 AAGTSHFR 284
            AG + FR
Sbjct: 225 PAGITKFR 232


>gi|324328622|gb|ADY23882.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 337

 Score = 43.6 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E  LA +     + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LARLFVSIGVRKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175


>gi|85859326|ref|YP_461528.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
 gi|85722417|gb|ABC77360.1| radical SAM superfamily [Syntrophus aciditrophicus SB]
          Length = 408

 Score = 43.6 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 40/200 (20%), Positives = 69/200 (34%), Gaps = 45/200 (22%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           YP   + ++   C + C  C             L++ + +  +  I        ++FTGG
Sbjct: 60  YPGHPVWEVTRACNLSCIHC--HAKSSQAASDELTTAEGKRLIDQIASMPAFRTLVFTGG 117

Query: 153 DPLILSHKRLQKVLKT-----LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           +PL+     + ++L+      L  I               +   I+  + + LK+ G  V
Sbjct: 118 EPLVRKD--IFELLRHSQKAGLANI------------LATNGTLIDDAMARKLKDHGV-V 162

Query: 208 YIAIHANHPYE-----------FSEEAIAAISRLANAGIIL--------LSQSV---LLK 245
             AI  + P E             E A+  I     AGI+L         +  V   L+ 
Sbjct: 163 CNAISVDAPDETIHNYVRNSPRAFELALRGIEATKKAGILLQINTTAMEYNLPVLSELID 222

Query: 246 GINDDPEILANLMRTFVELR 265
            IND    +  LM   V + 
Sbjct: 223 FINDQGASVM-LMYQLVAVG 241


>gi|30260587|ref|NP_842964.1| hypothetical protein BA_0421 [Bacillus anthracis str. Ames]
 gi|47525697|ref|YP_017046.1| hypothetical protein GBAA_0421 [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183436|ref|YP_026688.1| hypothetical protein BAS0408 [Bacillus anthracis str. Sterne]
 gi|65317850|ref|ZP_00390809.1| COG0535: Predicted Fe-S oxidoreductases [Bacillus anthracis str.
           A2012]
 gi|170707171|ref|ZP_02897627.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|229603544|ref|YP_002865034.1| hypothetical protein BAA_0486 [Bacillus anthracis str. A0248]
 gi|254762009|ref|ZP_05213858.1| hypothetical protein BantA9_26321 [Bacillus anthracis str.
           Australia 94]
 gi|30253955|gb|AAP24450.1| conserved hypothetical protein [Bacillus anthracis str. Ames]
 gi|47500845|gb|AAT29521.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49177363|gb|AAT52739.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
 gi|170127949|gb|EDS96820.1| conserved hypothetical protein [Bacillus anthracis str. A0389]
 gi|229267952|gb|ACQ49589.1| conserved hypothetical protein [Bacillus anthracis str. A0248]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +          P +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGV----------PTQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|257470893|ref|ZP_05634983.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans
           ATCC 49185]
 gi|317065094|ref|ZP_07929579.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans
           ATCC 49185]
 gi|313690770|gb|EFS27605.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans
           ATCC 49185]
          Length = 324

 Score = 43.6 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 70/162 (43%), Gaps = 18/162 (11%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C++C   R M    +  +L+ ++ +  +  I  K  I ++  TGG+PL+ 
Sbjct: 14  LSITDRCNLRCQYCMSERNMNFLPREELLTFEEIKRVVK-IFSKIGIKKIRLTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP- 216
             +    +L+ +  ++ ++ +   +   +     +       LK   K + I++   +P 
Sbjct: 72  -RRNFSDILENISSVEGIKEINLTTNGLL-----LGENFESLLKNKVKKINISLDTLNPV 125

Query: 217 --YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
              E +     ++ +  I +    GI  +    VL+KG ND+
Sbjct: 126 LYNEITRGGSLDKVLKNIFKAIELGIERVKINIVLIKGKNDN 167


>gi|40062747|gb|AAR37641.1| molybdenum cofactor biosynthesis protein A [uncultured marine
           bacterium 439]
          Length = 331

 Score = 43.6 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 20/162 (12%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C   C +C        + +  VLS ++    +    E   + +V  TGG+PL+ 
Sbjct: 17  VSVTDHCNYRCHYCRDEDHQTHTTRSEVLSFEEIVKIVGLFAE-LGVTKVRLTGGEPLLR 75

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216
               +  + + L  I  +  +      P+     + P L   LK  G     I+I +  P
Sbjct: 76  KD--ILDLTRMLGDIPGLTDI------PLSTNAHLLPSLAGKLKSHGINRANISIDSLIP 127

Query: 217 ---YEFSEE-----AIAAISRLANAGI-ILLSQSVLLKGIND 249
               E + +      I  I     AG+  +    V++KG+ND
Sbjct: 128 ERFKEITRDGDLARVIKGIDAAIAAGMSPIKLNMVVMKGVND 169


>gi|49480103|ref|YP_034749.1| moaA/nifB/pqqE family protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|218901625|ref|YP_002449459.1| hypothetical protein BCAH820_0467 [Bacillus cereus AH820]
 gi|228925675|ref|ZP_04088762.1| dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
 gi|229120083|ref|ZP_04249335.1| dehydrogenase [Bacillus cereus 95/8201]
 gi|49331659|gb|AAT62305.1| probable moaA/nifB/pqqE family protein [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|218536468|gb|ACK88866.1| conserved hypothetical protein [Bacillus cereus AH820]
 gi|228663321|gb|EEL18909.1| dehydrogenase [Bacillus cereus 95/8201]
 gi|228833950|gb|EEM79500.1| dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC
           4BA1]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|295092195|emb|CBK78302.1| MiaB-like tRNA modifying enzyme [Clostridium cf. saccharolyticum
           K10]
          Length = 443

 Score = 43.6 bits (102), Expect = 0.046,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%)

Query: 94  PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAY-------IQEKS 142
             R  +K+   C  +C +C     R  +       V+   +  AA  Y       I   S
Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRSMEDVVQEVEALAASGYKEIVLTGIHLSS 201

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
              +   T  +P   +   L  ++  L  I  ++ +R  S    ++P+ I  E  + L 
Sbjct: 202 YGADFKRTAENPEAAAD--LLSLIVRLDRIPGIERIRLGS----LEPRIITDEFAETLA 254


>gi|23097891|ref|NP_691357.1| hypothetical protein OB0436 [Oceanobacillus iheyensis HTE831]
 gi|22776115|dbj|BAC12392.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 376

 Score = 43.6 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 12/117 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
               ++C + C  C     +       L  +  E  L  I     +  +  TGG+P +++
Sbjct: 36  FTTTYMCNMRCAHCAVGYTLQQMDPDALPMELIEKRLDEI---PHLRTLSITGGEP-MMN 91

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
            K +++ +  L    H + ++      +  P     E++  L          +H +H
Sbjct: 92  KKSVRQYVLPLLKYAHERGIKTQMNSNLTLPYNRYEEIVPYLD--------VLHISH 140


>gi|320161385|ref|YP_004174609.1| molybdenum cofactor biosynthesis protein A [Anaerolinea thermophila
           UNI-1]
 gi|319995238|dbj|BAJ64009.1| molybdenum cofactor biosynthesis protein A [Anaerolinea thermophila
           UNI-1]
          Length = 328

 Score = 43.6 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 72/165 (43%), Gaps = 24/165 (14%)

Query: 99  LKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   + +  +    ++  ++    +  +  +  I ++  TGG+PL  
Sbjct: 15  ISVTDRCNLRCVYCMPPQGIPLTSHDAIMRYEEIVEVVR-VAAEQGITDIRLTGGEPL-- 71

Query: 158 SHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
              RL   +++  +  +  ++ +   +   ++  +R   E    LKEAG K V I++   
Sbjct: 72  --ARLGITELVHMIAAVPGIRDISMTTNGLLL--ERFAGE----LKEAGLKRVNISLDTL 123

Query: 215 HPYEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDD 250
           +P  F+              I    +AG+  +   +V+++G+NDD
Sbjct: 124 NPERFARITRGGSFEQVWRGILAAESAGLYPIKLNTVVMRGVNDD 168


>gi|298385134|ref|ZP_06994693.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 1_1_14]
 gi|298262278|gb|EFI05143.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 1_1_14]
          Length = 164

 Score = 43.6 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 89  IVHRYPDRILL-------KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           ++  YP+ I+          L  C  +C  C   E    + G +L+ +  ++ +  I+  
Sbjct: 13  LLSTYPETIVDGEGIRYSIYLAGCSHHCVGCHNPESWNPRAGELLTEERIQSIIREIKAN 72

Query: 142 SQIWEVIFTGGDPLILSHKRL 162
             +  V F+GGDP       L
Sbjct: 73  PLLDGVTFSGGDPFYNPEAFL 93


>gi|161522430|ref|YP_001585359.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans ATCC 17616]
 gi|160345983|gb|ABX19067.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans ATCC 17616]
          Length = 408

 Score = 43.6 bits (102), Expect = 0.047,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 45/195 (23%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
           L ++  C   C +C  RE+ GS    +  +     A L  I        + ++  TGG+P
Sbjct: 80  LSVIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLERIARAFVSLGVEKIRITGGEP 139

Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
           L+   + L+ +++ L  +  V                    + LR    +RV +     +
Sbjct: 140 LL--RRHLETLIERLAALTTVDGRPVELALTTNGALLAAKARTLRDAGLTRVTVSL-DAL 196

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
           +  + + + +A  PV   +             A I     AG   +   +V+ +G NDD 
Sbjct: 197 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGANDD- 242

Query: 252 EILANLMRTFVELRI 266
             +  L+R F    +
Sbjct: 243 -QILPLVRHFRHTGV 256


>gi|303229106|ref|ZP_07315908.1| MiaB-like protein [Veillonella atypica ACS-134-V-Col7a]
 gi|302516230|gb|EFL58170.1| MiaB-like protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 435

 Score = 43.6 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFT 150
             R  +K+   C  YC FC     +       L S+  +  +     + E     E++ T
Sbjct: 147 KSRAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVNEAKRLVEH-GFHEIVLT 200

Query: 151 G---GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G   G+  +    R  L  V+K L  I ++  +RF S    ++   ++ ELI+ L    K
Sbjct: 201 GIHLGNYGVELPGRPTLADVVKALLEIPNLHRIRFGS----IESVEVSDELIE-LMATDK 255

Query: 206 PVYIAIH 212
            V   +H
Sbjct: 256 RVCPHLH 262


>gi|229182806|ref|ZP_04310045.1| dehydrogenase [Bacillus cereus BGSC 6E1]
 gi|228600686|gb|EEK58267.1| dehydrogenase [Bacillus cereus BGSC 6E1]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|196040113|ref|ZP_03107415.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|196045287|ref|ZP_03112519.1| oxidoreductase, radical SAM superfamily [Bacillus cereus 03BB108]
 gi|228913169|ref|ZP_04076808.1| dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|301052137|ref|YP_003790348.1| putative moaA/nifB/pqqE family protein [Bacillus anthracis CI]
 gi|196023871|gb|EDX62546.1| oxidoreductase, radical SAM superfamily [Bacillus cereus 03BB108]
 gi|196028968|gb|EDX67573.1| conserved hypothetical protein [Bacillus cereus NVH0597-99]
 gi|228846574|gb|EEM91587.1| dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1]
 gi|300374306|gb|ADK03210.1| probable moaA/nifB/pqqE family protein [Bacillus cereus biovar
           anthracis str. CI]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|165870651|ref|ZP_02215304.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167634839|ref|ZP_02393158.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|167641253|ref|ZP_02399506.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|170688985|ref|ZP_02880186.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|177654528|ref|ZP_02936384.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190567633|ref|ZP_03020546.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|227813094|ref|YP_002813103.1| hypothetical protein BAMEG_0492 [Bacillus anthracis str. CDC 684]
 gi|254686810|ref|ZP_05150668.1| hypothetical protein BantC_23620 [Bacillus anthracis str.
           CNEVA-9066]
 gi|254724884|ref|ZP_05186667.1| hypothetical protein BantA1_20854 [Bacillus anthracis str. A1055]
 gi|254738964|ref|ZP_05196666.1| hypothetical protein BantWNA_27720 [Bacillus anthracis str. Western
           North America USA6153]
 gi|254744552|ref|ZP_05202231.1| hypothetical protein BantKB_26716 [Bacillus anthracis str. Kruger
           B]
 gi|254756190|ref|ZP_05208219.1| hypothetical protein BantV_27321 [Bacillus anthracis str. Vollum]
 gi|164713485|gb|EDR19009.1| conserved hypothetical protein [Bacillus anthracis str. A0488]
 gi|167510761|gb|EDR86154.1| conserved hypothetical protein [Bacillus anthracis str. A0193]
 gi|167529913|gb|EDR92661.1| conserved hypothetical protein [Bacillus anthracis str. A0442]
 gi|170667086|gb|EDT17848.1| conserved hypothetical protein [Bacillus anthracis str. A0465]
 gi|172080640|gb|EDT65723.1| conserved hypothetical protein [Bacillus anthracis str. A0174]
 gi|190561420|gb|EDV15392.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I]
 gi|227003854|gb|ACP13597.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|161525364|ref|YP_001580376.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans ATCC 17616]
 gi|189349899|ref|YP_001945527.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans ATCC 17616]
 gi|160342793|gb|ABX15879.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans ATCC 17616]
 gi|189333921|dbj|BAG42991.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans ATCC 17616]
          Length = 370

 Score = 43.6 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 21/125 (16%)

Query: 58  RQFIPQKE-----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           R+ IP  +     +++ +P   +  + D    PL+ +         + +   C   C +C
Sbjct: 3   RRIIPLADVSGVPDVSGVPHAPDGTLADTFGRPLRDLR--------ISVTDRCNFRCVYC 54

Query: 113 FRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
             RE+ G          +L+ ++ E           + ++  TGG+PL+   K L+ +++
Sbjct: 55  MPREVFGKDYPFLPHSALLTHEEIERVARIFVAH-GVEKIRITGGEPLL--RKNLEFLIE 111

Query: 168 TLRYI 172
            L  +
Sbjct: 112 RLARL 116


>gi|94502018|ref|ZP_01308524.1| radical SAM domain protein [Oceanobacter sp. RED65]
 gi|94425825|gb|EAT10827.1| radical SAM domain protein [Oceanobacter sp. RED65]
          Length = 294

 Score = 43.6 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 8/87 (9%)

Query: 97  ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGG 152
           ++L++ + C    C FC   EM   ++    + K+ E     I     I    +V    G
Sbjct: 18  LILQVTNGCSWNNCTFC---EMYTQEQKKFKARKEEEVEQDIINASKMIQPFEKVFLADG 74

Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
           D ++L  +RL+ +L++++  +  V+ +
Sbjct: 75  DAMVLPMRRLKAILQSIKQHMPWVKRV 101


>gi|229089543|ref|ZP_04220810.1| dehydrogenase [Bacillus cereus Rock3-42]
 gi|228693759|gb|EEL47455.1| dehydrogenase [Bacillus cereus Rock3-42]
          Length = 375

 Score = 43.6 bits (102), Expect = 0.048,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|303241628|ref|ZP_07328127.1| RNA modification enzyme, MiaB family [Acetivibrio cellulolyticus
           CD2]
 gi|302590848|gb|EFL60597.1| RNA modification enzyme, MiaB family [Acetivibrio cellulolyticus
           CD2]
          Length = 438

 Score = 43.6 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 24/133 (18%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEV 147
           V++   R  +K+   C  +C +C     +       + S+  E  L  ++    +   E+
Sbjct: 138 VYKERTRAFIKIQEGCSQFCSYC-----IIPYARGPIRSRPVEYVLDEVRKLALNGYKEI 192

Query: 148 IFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           + TG        D   +    L  ++K +  I  V+ +R  S    ++P  I  E +  +
Sbjct: 193 VLTGIHIASYGKD---IKTTSLIDIIKKVHEIDGVERVRLGS----IEPTTITHEFVNEI 245

Query: 201 KEAGKPVYIAIHA 213
            +  K   +  H 
Sbjct: 246 GKLEK---VCPHF 255


>gi|282850176|ref|ZP_06259555.1| MiaB-like protein [Veillonella parvula ATCC 17745]
 gi|294791828|ref|ZP_06756976.1| Fe-S oxidoreductase [Veillonella sp. 6_1_27]
 gi|294793689|ref|ZP_06758826.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44]
 gi|282579669|gb|EFB85073.1| MiaB-like protein [Veillonella parvula ATCC 17745]
 gi|294455259|gb|EFG23631.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44]
 gi|294457058|gb|EFG25420.1| Fe-S oxidoreductase [Veillonella sp. 6_1_27]
          Length = 431

 Score = 43.6 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 17/124 (13%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-- 151
           R  +K+   C  YC FC     +       L S+  +  +   +        E++ TG  
Sbjct: 145 RAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVQEAKRLVDHGFHEIVLTGIH 199

Query: 152 -GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            G+  +    R  L  V+K L  I ++  +RF S    ++   ++ EL++ L    K V 
Sbjct: 200 LGNYGVELPGRPTLADVVKALLEIPNLYRIRFGS----IESVEVSDELVE-LMATNKRVC 254

Query: 209 IAIH 212
             +H
Sbjct: 255 PHLH 258


>gi|226311475|ref|YP_002771369.1| coproporphyrinogen III oxidase [Brevibacillus brevis NBRC 100599]
 gi|226094423|dbj|BAH42865.1| putative coproporphyrinogen III oxidase [Brevibacillus brevis NBRC
           100599]
          Length = 507

 Score = 43.6 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 58/161 (36%), Gaps = 15/161 (9%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF------RREMVGSQKGTVLSSKDT 131
           I D   + +  +     +  +   +  CP  C +C       R               + 
Sbjct: 154 IVDKQLNVVPDLYQIDRELSVYIGIPFCPTKCAYCTFPAYAIRSHTASVNPFLEGLHYEM 213

Query: 132 EAALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
           E    +++   Q I  + F GG P  ++   + ++ +T+ R   H+  +R  + V    P
Sbjct: 214 ERMGEWLRANDQRITSIYFGGGTPTSITADDMNQLFETMHRSFPHMGDVRELT-VEAGRP 272

Query: 190 QRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR 229
             I  E +  +K      + I      P  F++E + AI R
Sbjct: 273 DTITREKLDVMKRWEVDRISIN-----PQSFTQETLQAIGR 308


>gi|221201327|ref|ZP_03574366.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans CGD2M]
 gi|221208807|ref|ZP_03581805.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans CGD2]
 gi|221214113|ref|ZP_03587086.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans CGD1]
 gi|221166290|gb|EED98763.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans CGD1]
 gi|221171263|gb|EEE03712.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans CGD2]
 gi|221178595|gb|EEE11003.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans CGD2M]
          Length = 370

 Score = 43.6 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 21/125 (16%)

Query: 58  RQFIPQKE-----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
           R+ IP  +     +++ +P   +  + D    PL+ +         + +   C   C +C
Sbjct: 3   RRIIPLADVSGVPDVSGVPHAPDGTLADTFGRPLRDLR--------ISVTDRCNFRCVYC 54

Query: 113 FRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
             RE+ G          +L+ ++ E           + ++  TGG+PL+   K L+ +++
Sbjct: 55  MPREVFGKDYPFLPHSALLTHEEIERVARIFVAH-GVEKIRITGGEPLL--RKNLEFLIE 111

Query: 168 TLRYI 172
            L  +
Sbjct: 112 RLARL 116


>gi|49187615|ref|YP_030868.1| molybdenum cofactor biosynthesis protein A, N-terminus [Bacillus
           anthracis str. Sterne]
 gi|49181542|gb|AAT56918.1| molybdenum cofactor biosynthesis protein A, N-terminus [Bacillus
           anthracis str. Sterne]
          Length = 252

 Score = 43.6 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 31  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 89

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 90  PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 141

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 142 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 188


>gi|108757868|ref|YP_632408.1| molybdenum cofactor biosynthesis protein MoaA [Myxococcus xanthus
           DK 1622]
 gi|108461748|gb|ABF86933.1| molybdenum cofactor biosynthesis protein MoaA [Myxococcus xanthus
           DK 1622]
          Length = 334

 Score = 43.6 bits (102), Expect = 0.049,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 69/223 (30%), Gaps = 45/223 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C   C +C         K  +L  ++ E   +       I  V  TGG+PLI  
Sbjct: 30  LSITDRCNFRCSYC--SPASWGGKRDLLGPEELERITSVFARM-GIRRVRLTGGEPLIRP 86

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
              +  + + +  +  +Q L   +             L + L+EAG         N    
Sbjct: 87  D--ILDIARRIAAVPGIQHLAI-TSNASHL-----ERLARPLREAG-----VTQLN--LS 131

Query: 219 FSEEAIAAISRLANAG---IILLS--------------QSVLLKGINDDPEILANLMRTF 261
                     R++  G    +L                  V+++G+ND  E  + L+   
Sbjct: 132 LDTLLAETFRRISKQGDFDAVLRGVDAAAGAGYASLKLNVVVMRGVND--EEASALIAYA 189

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
                 P       +  G       +    ++V  L+   SGL
Sbjct: 190 HARGFTP--RFIELMPFGQG---TPVPTA-ELVERLQA--SGL 224


>gi|332669698|ref|YP_004452706.1| Radical SAM domain-containing protein [Cellulomonas fimi ATCC 484]
 gi|332338736|gb|AEE45319.1| Radical SAM domain protein [Cellulomonas fimi ATCC 484]
          Length = 398

 Score = 43.6 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 33/202 (16%), Positives = 72/202 (35%), Gaps = 40/202 (19%)

Query: 85  PLKGIVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           P++ + H   DR   ++ ++   C + CR C R + +  +    L + D +  +  +   
Sbjct: 19  PVRVLHHDVSDRPFLVIWEVTRACALACRHC-RADAIPRRDPRELDTDDGKRLMDDLASF 77

Query: 142 SQIWEVI-FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRIN 193
                ++  TGGDP       L +++             + +         P V P R+ 
Sbjct: 78  GAPRPLLVLTGGDPFERPD--LTELVA------------YGTSIGLSVALAPSVTP-RLT 122

Query: 194 PELIQCLKEAGKPVYIA--------IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
            +++  L++AG               H          +  + A+  + +AGI L   + +
Sbjct: 123 RDVLLELRDAGAKAVSVSLDGAQAETHDAFRGVPGVYDATLTAMEAVRSAGIRLQVNTTV 182

Query: 244 LKGINDDPEILANLMRTFVELR 265
             G       L  ++R  ++  
Sbjct: 183 TAG---TVHELPWVLRRVLDAG 201


>gi|288959088|ref|YP_003449429.1| nitrogen fixation protein [Azospirillum sp. B510]
 gi|288911396|dbj|BAI72885.1| nitrogen fixation protein [Azospirillum sp. B510]
          Length = 521

 Score = 43.6 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 54/256 (21%), Positives = 87/256 (33%), Gaps = 67/256 (26%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H Y  R+ + +   C + C +C R+         G     +   +  +  LA  QE  Q
Sbjct: 65  AHHYFARMHVAVAPACNIQCNYCNRKYDCSNESRPGVVSEKLTPDQALKKILAVAQEIPQ 124

Query: 144 IWEVIFTG-GDPL-----------------------ILSHKRLQ--KVLKTLRY--IKHV 175
           +  +   G GD L                        LS   L     + T+    I HV
Sbjct: 125 LSVIGIAGPGDSLAAAGKNTFATFEMLQKKAPDLKLCLSTNGLALPDHVDTIAQYNIDHV 184

Query: 176 QILRFHSRVPIVDPQ---RINPELIQCLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLA 231
             +  +    +VDP+   RI P +    K   G      +H        E+ +  +  L 
Sbjct: 185 -TITIN----MVDPEVGARIYPWIFYKHKRWTGLDAAKILH--------EQQMLGLEMLT 231

Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHF--- 283
           + GI++   SV++ G+ND  E L  + +           I P      D A GT +F   
Sbjct: 232 SRGILVKVNSVMIPGVND--EHLLEVNKAVKSCGAFLHNIMPL---ISDPAHGT-YFGLN 285

Query: 284 --RLTIEEGQKIVASL 297
             R    +  K+V   
Sbjct: 286 GQRGPTAQELKLVQDA 301


>gi|256389735|ref|YP_003111299.1| radical SAM domain-containing protein [Catenulispora acidiphila DSM
           44928]
 gi|256355961|gb|ACU69458.1| Radical SAM domain protein [Catenulispora acidiphila DSM 44928]
          Length = 815

 Score = 43.6 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 36/161 (22%)

Query: 98  LLKLLHVCPVYCRFCFRRE---MVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-----IF 149
           +LK+   C + C  C+  E        +  V+S +  E     I + ++   V     I 
Sbjct: 13  ILKVHSRCDLACNHCYMYEGADQSWQARPKVMSLETAERIGGRIADHARRHGVDSVRLIL 72

Query: 150 TGGDPLILSHKRLQKVLKTLRYI-KHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
            GG+PL+   ++L+ ++  LR +   +   +R H+        R++   +    +    V
Sbjct: 73  HGGEPLLAGTEQLEGIILRLRKVLDGITADIRVHTNAV-----RLDARFLDLFVKHDVRV 127

Query: 208 YIAI---------H-------ANHPYEFSEEAIAAISRLAN 232
            +++         H        +HP        AA++ L  
Sbjct: 128 GVSLDGDRLANDRHRLYSDGRTSHPQ-----VRAALALLRR 163


>gi|187778883|ref|ZP_02995356.1| hypothetical protein CLOSPO_02478 [Clostridium sporogenes ATCC
           15579]
 gi|187772508|gb|EDU36310.1| hypothetical protein CLOSPO_02478 [Clostridium sporogenes ATCC
           15579]
          Length = 454

 Score = 43.6 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 39/169 (23%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L +   C   C FCF  ++    + T+    D ++ L+++Q       +  T      
Sbjct: 89  AILDVPQRCHNNCLFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FLTLT-----N 138

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
           +  + +++++     I  +  +  H+     +P+ R+  EL+                  
Sbjct: 139 MKDEDIERIIN--YKISPIN-ISVHT----TNPELRV--ELLN----------------- 172

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
              F+      + +LA  GI +  Q VL  G+N + E L   +     L
Sbjct: 173 -NRFAGNIYERMKKLAEGGIKMNCQVVLCPGLN-NAEELKRTIEDLYAL 219


>gi|325289531|ref|YP_004265712.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
 gi|324964932|gb|ADY55711.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
          Length = 332

 Score = 43.6 bits (102), Expect = 0.050,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C +YC  C+R   V  ++   LS+ + E  L  I   +    +IF+GG+PL+
Sbjct: 3   VSWNTTNACNMYCDHCYRDSGVRQEEE--LSTAEAETMLEQIAR-AGFKIMIFSGGEPLM 59

Query: 157 LSH-KRLQKVLKTL 169
                 L    + L
Sbjct: 60  RPDIVDLAAYAREL 73


>gi|312877235|ref|ZP_07737203.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795949|gb|EFR12310.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A]
          Length = 218

 Score = 43.6 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 15/135 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +    + CP  C FC ++ + G ++        +  E  L  I     + E+ + GG+  
Sbjct: 8   IFIPQYACPFNCIFCNQKTISGEKEEVSFDRIKRQIEQGLK-INPDEDV-ELAYYGGNFT 65

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
            +     +K+L+     + ++ +R  +R     P  I+ E ++ LK    K + + I   
Sbjct: 66  AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLRLLKLYNVKTIELGI--- 117

Query: 215 HPYEFSEEAIAAISR 229
                 ++ + A +R
Sbjct: 118 --QSMFDDVLNACAR 130


>gi|210623865|ref|ZP_03294100.1| hypothetical protein CLOHIR_02051 [Clostridium hiranonis DSM 13275]
 gi|210153291|gb|EEA84297.1| hypothetical protein CLOHIR_02051 [Clostridium hiranonis DSM 13275]
          Length = 432

 Score = 43.6 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 20/128 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  +C +C     +       + S+D +  +  ++        EV+ TG
Sbjct: 141 RTRAFMKIQDGCDRFCTYC-----IIPYARGRVRSRDLDNIVEEVKLLASKGYKEVVLTG 195

Query: 152 GDPLI----LSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                    +  K  +L  V+K +  I  ++ +R  S    V+P     E ++ + +  K
Sbjct: 196 IHVASYGKDIKDKEVKLLDVIKAVNEIDGIERIRTSS----VEPILFTDEFVEEISKMNK 251

Query: 206 PVYIAIHA 213
              +  H 
Sbjct: 252 ---VCPHF 256


>gi|169830805|ref|YP_001716787.1| molybdenum cofactor biosynthesis protein A [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169637649|gb|ACA59155.1| molybdenum cofactor biosynthesis protein A [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 327

 Score = 43.6 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 45/222 (20%), Positives = 83/222 (37%), Gaps = 41/222 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
           + L   C + C +C      G QK   +     E+ +  I+   +  I ++  TGG+PL+
Sbjct: 17  VSLTERCNLNCFYC----RPGEQKTPTVDGLPLESLMRVIRAGARVGIRKIRLTGGEPLV 72

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANH 215
                   V+  L  I  +  +   +   ++ P+       Q L+ AG K V I++    
Sbjct: 73  RPDVI--PVVAALNEIPQIDDIALTTNGSLLAPR------AQGLRAAGLKRVNISLDTLR 124

Query: 216 PYEF-----SEEAIAAISRLANAGI----ILLSQSVLLKGINDDP-EILANLMRTFVELR 265
           P  F     + E  A ++ L  A       +    V+++GINDD  +    L        
Sbjct: 125 PDRFRSITRNGELSAVMNGLEAALAQDLHPVKLNMVVMRGINDDEIDDFVRLTED----- 179

Query: 266 IKPYYLHH----PDLAAGTSHFR----LTIEEGQKIVASLKE 299
            +P  LH           +SH+     +  +E ++ +     
Sbjct: 180 -RP--LHIRFIELMPIGVSSHWASEYYVPADEIRRNIDQRYG 218


>gi|118580731|ref|YP_901981.1| MiaB-like tRNA modifying protein [Pelobacter propionicus DSM 2379]
 gi|118503441|gb|ABK99923.1| MiaB-like tRNA modifying enzyme [Pelobacter propionicus DSM 2379]
          Length = 427

 Score = 43.6 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 17/151 (11%)

Query: 72  EEREDPIGDNNHSPLKGIVHR----YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +  ED + D   +    ++H        R  L++ + C  +C +C      G  +   +S
Sbjct: 110 DASEDMVKDAGQATGGALLHLTSFAEHTRAFLQVQNGCDSFCSYCIVPYARG--RSRSVS 167

Query: 128 SKDTEAALAYIQEKSQIWEVIFT----GGDPLILSH-KRLQKVLKTLRYIKHVQILRFHS 182
             +    +  +   S   EV+ T    G   L LS  + L  +++ +     ++ LR  S
Sbjct: 168 PAEVLEGVRRL-VDSGFREVVLTGIHLGAYGLDLSPGESLACLVERILEETSLERLRIGS 226

Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
               ++P   +  LI     + + V    H 
Sbjct: 227 ----LEPNEFDDRLISLFSRSPR-VCHHFHI 252


>gi|310823369|ref|YP_003955727.1| hypothetical protein STAUR_6143 [Stigmatella aurantiaca DW4/3-1]
 gi|309396441|gb|ADO73900.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1]
          Length = 480

 Score = 43.6 bits (102), Expect = 0.051,   Method: Composition-based stats.
 Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 34/182 (18%)

Query: 86  LKGIVHRYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           L  +  +Y  R           +  +   C   C++C     V  +    ++ +  + AL
Sbjct: 79  LDLLALKYRTRAEQLAAFTGLHIFVVTLRCDHSCQYCQVSRQVEDRARFDMTREHADRAL 138

Query: 136 AYIQEKSQIW-EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRI 192
             + +      ++ F GG+PL L+   ++ V++    +     + L+F   V   +  R+
Sbjct: 139 DLVFQSPSPALKIEFQGGEPL-LNFGLIRHVVERALTLNQPLGRDLQF---VIATNLSRL 194

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEE------------AIAAISRLANAGIILLSQ 240
           + E++   K+ G  ++++   + P                   +  I R   A   L  Q
Sbjct: 195 SEEMLAFCKQHG--IFLSTSLDGPEALHNAQRPVRGGNSHQRTVEGIRRAREA---LGDQ 249

Query: 241 SV 242
           +V
Sbjct: 250 AV 251


>gi|299783310|gb|ADJ41308.1| Molybdenum (Mo2+) cofactor biosynthesis enzyme [Lactobacillus
           fermentum CECT 5716]
          Length = 332

 Score = 43.6 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R  D + + +   C + C +C  +E +       VLS  +    +    +   I +V  T
Sbjct: 10  RLHDYVRISITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLITNFAQ-LGIHKVRIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           GG+PL+ +      +++ ++ I  ++ +   +
Sbjct: 69  GGEPLLRTDVV--DIVRRIKEIDGIEDVSITT 98


>gi|313680339|ref|YP_004058078.1| radical sam domain protein [Oceanithermus profundus DSM 14977]
 gi|313153054|gb|ADR36905.1| Radical SAM domain protein [Oceanithermus profundus DSM 14977]
          Length = 357

 Score = 43.6 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 15/118 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE---VI 148
           RYP  +  ++ H C + C+ C       ++   +     TE A  +++E +       ++
Sbjct: 7   RYPFLVAWEMTHACDLACKHC----RASAEPDPLPGEITTEEAFRFLEEMATYKPKPILL 62

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
            TGGDPL      L ++L+  R +     ++     P V P  +  E+I   KE    
Sbjct: 63  PTGGDPL--KRHDLWEILEKARELG----IKIGI-TPAVTP-LLTHEVIDRFKELDVH 112


>gi|302330623|gb|ADL20817.1| Putative coenzyme PQQ synthesis related protein [Corynebacterium
           pseudotuberculosis 1002]
          Length = 412

 Score = 43.6 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 50/226 (22%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-V 147
           I H+ P   + ++   C + C+ C          G + + +   A L  +    +    V
Sbjct: 34  INHK-PFIAIWEVTRACGLVCKHCRANAQHKPHPGQLTTKQGF-ALLKDLASYDKPRPLV 91

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCL 200
           + TGGDP     + L+++++            + ++        P V P R+  E I  L
Sbjct: 92  VLTGGDPF--EREDLEELVE------------YGTQQGLSVSLSPSVTP-RLTSERIHRL 136

Query: 201 KEA-GKPVYIAIHANHPY----------EFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
            +  GK + +++                 F      A   + +AG  L   S L K   +
Sbjct: 137 HDLGGKAMSMSLDGATAQTHDAFRGFSGTFDATVSMA-QTILDAGFRLQINSTLTK---N 192

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
           +      L++T +E+  K +Y+           F +    G  + A
Sbjct: 193 NIREAPLLLKTVMEMGAKMWYVF----------FLVPTGRGAALHA 228


>gi|65319439|ref|ZP_00392398.1| COG2896: Molybdenum cofactor biosynthesis enzyme [Bacillus
           anthracis str. A2012]
          Length = 337

 Score = 43.6 bits (102), Expect = 0.052,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 34/172 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++  + +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LPKLIARLAKLEGXKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128

Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                        H +     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175


>gi|303232181|ref|ZP_07318884.1| MiaB-like protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302513287|gb|EFL55326.1| MiaB-like protein [Veillonella atypica ACS-049-V-Sch6]
          Length = 431

 Score = 43.6 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFT 150
             R  +K+   C  YC FC     +       L S+  +  +     + E     E++ T
Sbjct: 143 KSRAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVNEAKRLVEH-GFHEIVLT 196

Query: 151 G---GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G   G+  +    R  L  V+K L  I ++  +RF S    ++   ++ ELI+ L    K
Sbjct: 197 GIHLGNYGVELPGRPTLADVVKALLEIPNLHRIRFGS----IESVEVSDELIE-LMATDK 251

Query: 206 PVYIAIH 212
            V   +H
Sbjct: 252 RVCPHLH 258


>gi|295402412|ref|ZP_06812366.1| molybdenum cofactor biosynthesis protein A [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294975575|gb|EFG51199.1| molybdenum cofactor biosynthesis protein A [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 340

 Score = 43.6 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 38/174 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C   E+ G       +  +L+ ++         E   + ++  TGG+
Sbjct: 21  ISVTDQCNFRCVYCMPAEIFGPNFRFLREDELLTIEEMTLLAESFAE-LGVEKIRITGGE 79

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL--------------RF---HSRVPIVDPQRINPEL 196
           PL+     L   ++ L  I  ++ +              R      +   V    ++ ++
Sbjct: 80  PLLRRD--LDVFIERLVRIPGIRDIGLTTNGIHLVKWAKRLKEAGLKRVNVSLDALDDDI 137

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
            + +   G  V             +  +  I     AG+ +    V+ KG+ND 
Sbjct: 138 FKKMNGVGVGV-------------KPVLKGIEAAVEAGLGVKVNMVVKKGMNDS 178


>gi|312112039|ref|YP_003990355.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
           Y4.1MC1]
 gi|311217140|gb|ADP75744.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
           Y4.1MC1]
          Length = 340

 Score = 43.6 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 38/174 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C   E+ G       +  +L+ ++         E   + ++  TGG+
Sbjct: 21  ISVTDQCNFRCVYCMPAEIFGPNFRFLREDELLTIEEMTLLAESFAE-LGVEKIRITGGE 79

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL--------------RF---HSRVPIVDPQRINPEL 196
           PL+     L   ++ L  I  ++ +              R      +   V    ++ ++
Sbjct: 80  PLLRRD--LDVFIERLVRIPGIRDIGLTTNGIHLVKWAKRLKEAGLKRVNVSLDALDDDI 137

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
            + +   G  V             +  +  I     AG+ +    V+ KG+ND 
Sbjct: 138 FKKMNGVGVGV-------------KPVLKGIEAAVEAGLGVKVNMVVKKGMNDS 178


>gi|302385233|ref|YP_003821055.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
 gi|302195861|gb|ADL03432.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
          Length = 347

 Score = 43.6 bits (102), Expect = 0.053,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 11/109 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
            +L   C + C+ C+    + +     ++S++  +   Y+ E   I+E I +GG+PL+  
Sbjct: 45  FELTSHCNLACKHCYNNSGINNISDA-MTSQNWISFSQYLVEHGGIFECIISGGEPLLFG 103

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSR-VPIVDPQRINPELIQCLKEAGKP 206
           +      L  +  I H       +    I +   +  E+   L++    
Sbjct: 104 ND-----LFKIMDILHED----GTLFFLITNGYLLTKEIADQLRKYRYH 143


>gi|296132310|ref|YP_003639557.1| Radical SAM domain protein [Thermincola sp. JR]
 gi|296030888|gb|ADG81656.1| Radical SAM domain protein [Thermincola potens JR]
          Length = 443

 Score = 43.6 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 41/164 (25%)

Query: 80  DNNHSPLKGIVH-------------------RYPDRIL-------LKLLHVCPVYCRFCF 113
           + +++ +KGIV+                   +YP   +       +++   CP  C FC 
Sbjct: 149 EEDYTSVKGIVYMEKRGGIRFTGRRRPVNLNKYPPFAIKHRLFSPIEITRGCPYLCSFCQ 208

Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDPL--------ILSHKRLQ 163
              + G Q       +  E  L Y++  ++  + ++ F   +           ++  +L+
Sbjct: 209 TGHIFGPQ----PRHRSIENILGYVRLLTERGLTDIKFITPNAFSYGSPDGKTINVNKLE 264

Query: 164 KVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
            +L+ +R  I +   +   S    V P+ +  E +  +++    
Sbjct: 265 ALLRGVRAIIGNRGRIFMGSFPSEVRPEHVTEETVNLVRKYANN 308


>gi|291539696|emb|CBL12807.1| MiaB-like tRNA modifying enzyme [Roseburia intestinalis XB6B4]
          Length = 435

 Score = 43.6 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  +C +C     +   +G V S K  E  L  I    KS   EV+ TG
Sbjct: 143 HTRAFIKVQDGCNQFCSYCI----IPFARGRVRSRK-MEDVLNEINELAKSGYKEVVLTG 197

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                  + + + L  +++ +  I+ ++ +R  S    ++P+ +  +  + L E  K   
Sbjct: 198 IHLSSYGVDTGETLLSLIEHVHEIEGIERIRLGS----LEPRIVTEDFAKRLSELTK--- 250

Query: 209 IAIHA 213
           I  H 
Sbjct: 251 ICPHF 255


>gi|229161145|ref|ZP_04289132.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           R309803]
 gi|228622241|gb|EEK79080.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           R309803]
          Length = 337

 Score = 43.6 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G+      +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGTDYAFLQEECLLTFDEIERLARLFISM-GVEKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKLLKEAGLKRVNISLD 128

Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
               H     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDHVFQKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175


>gi|57168872|ref|ZP_00368002.1| MiaB-like tRNA modifying enzyme [Campylobacter coli RM2228]
 gi|305431977|ref|ZP_07401144.1| 2-methylthioadenine synthetase [Campylobacter coli JV20]
 gi|57019708|gb|EAL56394.1| MiaB-like tRNA modifying enzyme [Campylobacter coli RM2228]
 gi|304445061|gb|EFM37707.1| 2-methylthioadenine synthetase [Campylobacter coli JV20]
          Length = 418

 Score = 43.6 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 18/132 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     +  +L   +   A  Y        EV+ 
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEQALLRQVEILGANGY-------SEVVL 184

Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +     L +   L K+L+ +  I  ++ +R  S    ++P +I+   ++ L E    
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDERWME 240

Query: 207 VYIAIHANHPYE 218
            ++ I   H  E
Sbjct: 241 RHLHIALQHTSE 252


>gi|219669369|ref|YP_002459804.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
 gi|219539629|gb|ACL21368.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
          Length = 332

 Score = 43.6 bits (102), Expect = 0.054,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 26/152 (17%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C +YC  C+R    G Q    L++ + +  L  I   +    +IF+GG+PL+
Sbjct: 3   VSWNTTNACNMYCDHCYRDA--GCQAEEELNTAEAKTLLEQIAR-AGFKIMIFSGGEPLL 59

Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKP---VYI-A 210
                + +++     +     LR  F +   +     I  E+ + LKEAG     + + +
Sbjct: 60  RPD--IVELVAYATSLG----LRPVFGTNGTL-----ITVEMARRLKEAGAMGMGISLDS 108

Query: 211 IHANHPYEFS------EEAIAAISRLANAGII 236
           +H +   +F       EEA+  +      G+ 
Sbjct: 109 LHIDKHNQFRKYPRAWEEAVQGMRNCREVGLP 140


>gi|160915923|ref|ZP_02078131.1| hypothetical protein EUBDOL_01946 [Eubacterium dolichum DSM 3991]
 gi|158432399|gb|EDP10688.1| hypothetical protein EUBDOL_01946 [Eubacterium dolichum DSM 3991]
          Length = 249

 Score = 43.2 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 18/190 (9%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P    +  L+ C + C++C   +    Q+  + S +  + AL Y     Q   +  +GG+
Sbjct: 19  PGVRFVIFLNGCQMRCKYCHNVDTWQMQEANMTSDELLKKALRYRSYWKQGGGITVSGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVYIAIH 212
           PL+     L+ + +  +  K V  +   +   P    Q    +L + L      +    H
Sbjct: 79  PLLQIDFVLE-LFEKAKA-KGVHTV-LDTSGNPFTIEQPFFDKLQKLLAVTDLILLDIKH 135

Query: 213 AN---HPYEFSEEAIAAI----SRLANAGIILLSQSVLLKGINDDPEILANLM---RTFV 262
            +   H  E + +  A I      L+     +  + VL+ GINDD   L  L    +   
Sbjct: 136 IDALAH-KELTGQDNANILAFARYLSEIQKPVWIRHVLVPGINDDEAQLKRLSVFIKELS 194

Query: 263 ---ELRIKPY 269
               + + PY
Sbjct: 195 NVERVEVLPY 204


>gi|194335250|ref|YP_002017044.1| Radical SAM domain protein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194307727|gb|ACF42427.1| Radical SAM domain protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 428

 Score = 43.2 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 66/187 (35%), Gaps = 29/187 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTG 151
           P  I  ++   C + C  C     V S   +V     T   L  I E + I   E+ F+G
Sbjct: 96  PQTIFWEVTSRCNLQCLHC-----VVSAGESVTHDLSTRRCLELIDEWAAIGVQEITFSG 150

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+PL      L++ L  L      + L         +   +  ++ +  K  G  V I++
Sbjct: 151 GEPL------LREDLFELAAAAKQRNLTI---SMATNGTLMTRDVARRCKALGFDVQISL 201

Query: 212 HANHP---------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
             +            E   + +  I    + G+ L   +VL K   DD   L  L+    
Sbjct: 202 DGSTAEIYGAVRGRKEAFADVMEGIRNTLSEGVNLTVGTVLTKNNVDDIPELLKLVE--- 258

Query: 263 ELRIKPY 269
              I PY
Sbjct: 259 RSGI-PY 264


>gi|315928738|gb|EFV08014.1| uncharacterized protein family UPF0004 family protein
           [Campylobacter jejuni subsp. jejuni 305]
          Length = 255

 Score = 43.2 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 18/129 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     +  +L   +   A  Y        E++ 
Sbjct: 137 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 189

Query: 150 TGGD--PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +     L +   L K+L+ +  I  ++ +R  S    ++P +I+   ++ L E    
Sbjct: 190 TGTNIGSYGLKNGTSLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLE 245

Query: 207 VYIAIHANH 215
            ++ I   H
Sbjct: 246 RHLHIALQH 254


>gi|308070144|ref|YP_003871749.1| Fe-S oxidoreductase [Paenibacillus polymyxa E681]
 gi|305859423|gb|ADM71211.1| Predicted Fe-S oxidoreductase [Paenibacillus polymyxa E681]
          Length = 371

 Score = 43.2 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 6/71 (8%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVI 148
           H  P  ++ ++   C + C  C R E         L+ ++ +  +  I E        V+
Sbjct: 11  HTDPFIVIWEVTRACALKCLHC-RAEAQYKPDPRQLTLEEGKKLIDQIAEMNHP---LVV 66

Query: 149 FTGGDPLILSH 159
           FTGGDPL+   
Sbjct: 67  FTGGDPLMRPD 77


>gi|258514901|ref|YP_003191123.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257778606|gb|ACV62500.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 367

 Score = 43.2 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 12/88 (13%)

Query: 95  DRILLKL------LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEV 147
           DR+   +       ++C   C+FC      G +   VLS  + EA ALA       I E+
Sbjct: 54  DRVHFIVNRHINHTNICANRCKFCAFGRDAGDKGAYVLSLDEIEAKALA--SRNENISEI 111

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHV 175
              GG   +    +L   ++ L+ +K V
Sbjct: 112 HIVGG---LNPDLKLDYYVEALKRVKRV 136


>gi|255525323|ref|ZP_05392263.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7]
 gi|296188191|ref|ZP_06856583.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7]
 gi|255510995|gb|EET87295.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7]
 gi|296047317|gb|EFG86759.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7]
          Length = 436

 Score = 43.2 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 37/189 (19%)

Query: 57  ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFCFR 114
            +Q +  KE +     E  +             +  Y D  R  LK+   C  +C +C  
Sbjct: 115 RKQVVEVKEVMKNNAFEELN-------------IESYQDKTRAFLKIQDGCNRFCSYCLI 161

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-------GDPLILSHKRLQKVLK 167
                    +    K        +       E+I +G        D  +     L  VL+
Sbjct: 162 -PFARGAVCSKPPEKIISEVKE-LAAH-GFKEIILSGIHTASYGVD--LEEDCSLLSVLE 216

Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--PYEFSEEAIA 225
            +  I  ++ +R  S    +DPQ     +I+ +    K   +  H  H        E + 
Sbjct: 217 QIDKIPGIERVRIGS----IDPQFFTEGVIERISVLKK---LCPHF-HLSLQSGCNETLK 268

Query: 226 AISRLANAG 234
            ++R   AG
Sbjct: 269 RMNRRYTAG 277


>gi|289578151|ref|YP_003476778.1| radical SAM protein [Thermoanaerobacter italicus Ab9]
 gi|289527864|gb|ADD02216.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9]
          Length = 726

 Score = 43.2 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 25/160 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +++ +   C   C FC     +G  +     S D +  + +++  +  + +  TGG+PLI
Sbjct: 410 VIIGITRECNGNCNFC----QIGGPQKDTNKSFDYKQLVRFLKGNN--YHIQITGGEPLI 463

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-----PVYIAI 211
                L  +++ L+   H+  +   + + +     I+ E I+ LKE+        V I  
Sbjct: 464 -RKSELTPLIRELKKDGHI--ITLLTNLVL-----IDREFIELLKESFSVLDVGQVSIYA 515

Query: 212 HANHPYEFS------EEAIAAISRLANAGIILLSQSVLLK 245
           H    +E         +    I+ + N GI L +  VL K
Sbjct: 516 HNPQLHEIISGRNDWSKLNTLITEVINNGIQLRANLVLTK 555


>gi|168217879|ref|ZP_02643504.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens NCTC 8239]
 gi|182380088|gb|EDT77567.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens NCTC 8239]
          Length = 473

 Score = 43.2 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +      K   L+ +     +  ++        +  G DP+   
Sbjct: 91  LYVSNYCVNNCTYCGYKYCNNELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150

Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
              L  +L  ++ I  ++     +R   R+ +        E  + LK+            
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
             KP Y  +H + P         A+ R   AGI  +   V L G+ D   E LA LM   
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262

Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
                  + P+ L  P       +       + +  E+ +KIVA L+     L  P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312


>gi|89894967|ref|YP_518454.1| hypothetical protein DSY2221 [Desulfitobacterium hafniense Y51]
 gi|89334415|dbj|BAE84010.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 332

 Score = 43.2 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 26/152 (17%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C +YC  C+R    G Q    L++ + +  L  I + +    +IF+GG+PL+
Sbjct: 3   VSWNTTNACNMYCDHCYRDA--GCQAEEELNTAEAKTLLEQIAK-AGFKIMIFSGGEPLL 59

Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKP---VYI-A 210
                + +++     +     LR  F +   +     I  E+ + LKEAG     + + +
Sbjct: 60  RPD--IVELVAYATSLG----LRPVFGTNGTL-----ITVEMARRLKEAGAMGMGISLDS 108

Query: 211 IHANHPYEFS------EEAIAAISRLANAGII 236
           +H +   +F       EEA+  +      G+ 
Sbjct: 109 LHIDKHNQFRKYPRAWEEAVQGMRNCREVGLP 140


>gi|313896883|ref|ZP_07830430.1| putative heme d1 biosynthesis radical SAM protein NirJ2
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320530825|ref|ZP_08031863.1| radical SAM domain protein [Selenomonas artemidis F0399]
 gi|312974330|gb|EFR39798.1| putative heme d1 biosynthesis radical SAM protein NirJ2
           [Selenomonas sp. oral taxon 137 str. F0430]
 gi|320136911|gb|EFW28855.1| radical SAM domain protein [Selenomonas artemidis F0399]
          Length = 333

 Score = 43.2 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
             + C +YC  C+R    G +    LS+++ +  L  I + +    +IF+GG+PL     
Sbjct: 8   TTNACNMYCAHCYRDA--GCRAEEELSTEEAKKLLREIAK-AGFRIMIFSGGEPLTRPDI 64

Query: 160 KRLQKVLKTLRYIK 173
             L    + L  I 
Sbjct: 65  IELVAYARGLGLIP 78


>gi|312127785|ref|YP_003992659.1| Radical SAM domain-containing protein [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311777804|gb|ADQ07290.1| Radical SAM domain protein [Caldicellulosiruptor hydrothermalis
           108]
          Length = 341

 Score = 43.2 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 9/113 (7%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +    + CP  C FC ++ + G ++   L    +  E  L  I     + E+ + GG+  
Sbjct: 8   IFIPQYACPFNCIFCNQKTISGEKEEVSLDRIKRQIEQGLK-INPNEDV-ELAYYGGNFT 65

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            +     +K+L+     + ++ +R  +R     P  I+ E ++ LK       
Sbjct: 66  AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLRLLKLYNVRTI 113


>gi|253570571|ref|ZP_04847979.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 1_1_6]
 gi|251839520|gb|EES67603.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 1_1_6]
          Length = 164

 Score = 43.2 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 89  IVHRYPDRILL-------KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           ++  YP+ I+          L  C  +C  C   E    + G +L+ +  ++ +  I+  
Sbjct: 13  LLSTYPETIVDGEGIRYSIYLAGCSHHCVGCHNPESWNPRAGELLTEERIQSIIREIKAN 72

Query: 142 SQIWEVIFTGGDPLILSHKRL 162
             +  V F+GGDP       L
Sbjct: 73  PLLDGVTFSGGDPFYNPEAFL 93


>gi|212697143|ref|ZP_03305271.1| hypothetical protein ANHYDRO_01709 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675918|gb|EEB35525.1| hypothetical protein ANHYDRO_01709 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 166

 Score = 43.2 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 88  GIVHRYPD------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           G + +Y        R    +   C   C+ CF +E +    G   + K T+  ++Y+++ 
Sbjct: 4   GQIRKYDVANGPGIRTSFFVTG-CHANCKNCFNKEYMDPNFGNFWTEKQTQEVISYLKKD 62

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
            +I  +   GG+P   S + L K++K +R 
Sbjct: 63  -EIEGLTILGGEPFE-STEDLIKIVKKIRE 90


>gi|83591857|ref|YP_425609.1| GTP cyclohydrolase subunit MoaA [Rhodospirillum rubrum ATCC 11170]
 gi|83574771|gb|ABC21322.1| GTP cyclohydrolase subunit MoaA [Rhodospirillum rubrum ATCC 11170]
          Length = 365

 Score = 43.2 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 25/168 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C   +MV   K  +LS ++ E  ALA+I+    + ++  TGG+PL  
Sbjct: 46  LSVTDRCDLRCAYCMAEDMVFLPKRDLLSLEELETVALAFIRR--GVRKIRITGGEPLH- 102

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCLKEAGKPVYIA 210
             + L  +++ L      + LR   R           +  R+            + + ++
Sbjct: 103 -RRGLMGLIENLG-----RTLRPAERECGLDELTLTTNATRLAEVAGDLAARGVRRINVS 156

Query: 211 IHANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
           +    P  F             A ++    AG+ +   +V L+G+N+D
Sbjct: 157 LDTLRPERFRAITRRGDLDRVMAGLAAADRAGLAVKINTVALRGVNED 204


>gi|304437665|ref|ZP_07397617.1| radical SAM domain protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304369298|gb|EFM22971.1| radical SAM domain protein [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 378

 Score = 43.2 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
           + + C +YC  C+R    G +    LS+++ +  L  I + +    +IF+GG+PL     
Sbjct: 53  VTNACNMYCAHCYRDA--GCRADEELSTEEGKKLLREIAK-AGFRIMIFSGGEPLSRPDI 109

Query: 160 KRLQKVLKTLRYIK 173
             L    + L  I 
Sbjct: 110 LELVAYARGLGLIP 123


>gi|147677311|ref|YP_001211526.1| Fe-S oxidoreductases [Pelotomaculum thermopropionicum SI]
 gi|146273408|dbj|BAF59157.1| predicted Fe-S oxidoreductases [Pelotomaculum thermopropionicum SI]
          Length = 330

 Score = 43.2 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 77/213 (36%), Gaps = 41/213 (19%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C +YC+ C+R    G++    LS+++  A +  I   +    +IF+GG+PL+
Sbjct: 3   VSWNTTNACNMYCKHCYRDA--GAKAAEELSTEEGLALIDQIAG-AGFKIMIFSGGEPLM 59

Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA- 213
                +  ++   R     + LR  F +   +     I  E  + LKEAG  V + I   
Sbjct: 60  RDD--IFTLVARARE----RGLRPVFGTNGTL-----ITGETARRLKEAGAAV-MGISLD 107

Query: 214 -----NHPY-EFSE----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
                +H     +      A+  +     AG+     + ++    D+ E    L    V 
Sbjct: 108 SVDPKSHDDFRATPGAWQGAVDGMRACREAGLPFQVHTTVMGWNKDEVE---RLTDFAVR 164

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           +    +++           F +       I   
Sbjct: 165 MGAVGHHIF----------FLVPTGRAVGIAEE 187


>gi|29347409|ref|NP_810912.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides thetaiotaomicron VPI-5482]
 gi|29339309|gb|AAO77106.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides thetaiotaomicron VPI-5482]
          Length = 164

 Score = 43.2 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%)

Query: 89  IVHRYPDRILL-------KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           ++  YP+ I+          L  C  +C  C   E    + G +L+ +  ++ +  I+  
Sbjct: 13  LLSTYPETIVDGEGIRYSIYLAGCSHHCVGCHNPESWNPRAGELLTEERIQSIIREIKAN 72

Query: 142 SQIWEVIFTGGDPLILSHKRL 162
             +  V F+GGDP       L
Sbjct: 73  PLLDGVTFSGGDPFYNPEAFL 93


>gi|146296621|ref|YP_001180392.1| radical SAM domain-containing protein [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410197|gb|ABP67201.1| Radical SAM domain protein [Caldicellulosiruptor saccharolyticus
           DSM 8903]
          Length = 341

 Score = 43.2 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 52/114 (45%), Gaps = 11/114 (9%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +    + CP  C FC ++ + G ++   +    +  E  L+  + K +  E+ + GG+  
Sbjct: 8   IFIPQYGCPFKCIFCNQKIISGEKEDVTVQRIKRQIEEGLS--KNKGEDVELAYYGGN-F 64

Query: 156 ILSHKRLQ-KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                ++Q K+L+  R  ++++ +R  +R     P  I+ E++  LK+      
Sbjct: 65  TAIDIKMQQKLLELARSFENIKSIRISTR-----PDCIDKEILGFLKDYNVKTV 113


>gi|188589299|ref|YP_001920259.1| hypothetical protein CLH_0864 [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188499580|gb|ACD52716.1| conserved hypothetical protein [Clostridium botulinum E3 str.
           Alaska E43]
          Length = 434

 Score = 43.2 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 15/125 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C FC      G+   +    K  E     + E     EVI +G  
Sbjct: 141 KTRAFLKIQDGCNRFCTFCLIPYARGA-TCSKKPEKVIEEVKK-LAEH-GFKEVILSGIH 197

Query: 154 PLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                        L  +L+ +  I  +  +R  S    ++P     E+I  +K   K   
Sbjct: 198 TASYGVDLGAGVTLISLLEDIEKIDGIDRVRIGS----IEPAFFTDEVINKIKNMKK--- 250

Query: 209 IAIHA 213
           +  H 
Sbjct: 251 LCPHF 255


>gi|167753918|ref|ZP_02426045.1| hypothetical protein ALIPUT_02203 [Alistipes putredinis DSM 17216]
 gi|167658543|gb|EDS02673.1| hypothetical protein ALIPUT_02203 [Alistipes putredinis DSM 17216]
          Length = 344

 Score = 43.2 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 41/228 (17%), Positives = 74/228 (32%), Gaps = 44/228 (19%)

Query: 95  DRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
           DR  L +     C + CRFC             LS+ +    +  + E+ ++  V+F G 
Sbjct: 101 DRATLCISSQAGCRMGCRFCATGRQ---GLQHSLSTNEILNQIESLPERERLTNVVFMGM 157

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEAG 204
           G+PL      L  +L  L  +       F        P RI          L + L+   
Sbjct: 158 GEPL----DNLDSLLPALEVLTSAWG--FG-----WSPTRITVSTAGVASRLERFLEATQ 206

Query: 205 KPVYIAIH--ANH------PYEFSEEAIAAISRLANAGIILLSQS------VLLKGINDD 250
             + +++H    H      P E +      +  L         Q       +++ G+ND 
Sbjct: 207 VHLAVSLHNPFPHERAEIMPIEKAWPIREVVEILRRYDFT--HQRRVSFEYIVMSGLNDS 264

Query: 251 PEILANLMRTFVELRIKPYYL-HHPDLAAGTSHFRLTIEEGQKIVASL 297
           P  +  L R    ++ +   +  H     G+ +F    +         
Sbjct: 265 PRHIRELCRLLDGIKCRINLIRFH--KIPGSPYFS-PDDRAMIAFRDA 309


>gi|94967848|ref|YP_589896.1| radical SAM family Fe-S protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549898|gb|ABF39822.1| Fe-S protein, radical SAM family [Candidatus Koribacter versatilis
           Ellin345]
          Length = 375

 Score = 43.2 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 34/212 (16%), Positives = 70/212 (33%), Gaps = 35/212 (16%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
            P   + +    C + C  C             L++ D +  +  I E   +   + TGG
Sbjct: 10  KPFIAIWETTQACDLACVHCRACAQPQRSSDE-LTTADAKKLVDEIAEM-AVPVFVLTGG 67

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAI 211
           DPL      + +++         + +R  S  P   P  +  E I  LKEAG   + +++
Sbjct: 68  DPLKRPD--IFEIVGYAAS----RKVRI-SLTPSATP-LLTREAILRLKEAGLARLAVSL 119

Query: 212 HANHPYEFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
                 E  +              A+      G+ +   + + +    +   + +++   
Sbjct: 120 DGPTA-EIHDAFRKVAGSFQWTMDAVRWAREIGLPVQINTTITRH---NFHQIHDVIALL 175

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
            +L I  + +           F +    GQ I
Sbjct: 176 EKLDITLWSVF----------FLVPTGRGQDI 197


>gi|71907513|ref|YP_285100.1| radical SAM family protein [Dechloromonas aromatica RCB]
 gi|71847134|gb|AAZ46630.1| Radical SAM [Dechloromonas aromatica RCB]
          Length = 296

 Score = 43.2 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 11/91 (12%)

Query: 95  DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-----SQIWEVI 148
           + ++L +   C    C FC   EM  + +   ++  + +  L  I+       + I  V 
Sbjct: 18  ESLILPVTDGCSWNKCTFC---EMYTAPQKKFVARGE-DEVLESIRLTGLRYGNDIRRVF 73

Query: 149 FTGGDPLILSHKRLQKVLKTLR-YIKHVQIL 178
              GD L+L  +RL  +L+ +  ++  V+ +
Sbjct: 74  LADGDALVLPTRRLLTILEAIHTHMPAVRRI 104


>gi|242399892|ref|YP_002995317.1| MooA-like molybdenum cofactor biosynthesis protein A related
           [Thermococcus sibiricus MM 739]
 gi|242266286|gb|ACS90968.1| MooA-like molybdenum cofactor biosynthesis protein A related
           [Thermococcus sibiricus MM 739]
          Length = 419

 Score = 43.2 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 37/185 (20%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-- 145
           G++ R  + I ++    C V C FC   E   S+   +    D +  L +  E +Q    
Sbjct: 108 GLIDRGTNLIQVRGSTGCNVSCIFCSVDEGPYSRTRILDYVVDVDYLLKWFNEVAQFKGK 167

Query: 146 --EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
             E    G G+PL+     + ++++ LR   +V ++   S         +N +LI+ L E
Sbjct: 168 RLEAHLDGQGEPLVYP--FIVELVQGLRENPNVSVISMQSNG-----ALLNDKLIEELAE 220

Query: 203 AGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           AG   V ++IH                  NH  E +E        L NAGI +L   V++
Sbjct: 221 AGLDRVNLSIHSFDPEKAKMLMGMKDYDLNHVLEMAE-------ALINAGIDVLFAPVII 273

Query: 245 KGIND 249
            GIND
Sbjct: 274 FGIND 278


>gi|325290323|ref|YP_004266504.1| SSU ribosomal protein S12P methylthiotransferase [Syntrophobotulus
           glycolicus DSM 8271]
 gi|324965724|gb|ADY56503.1| SSU ribosomal protein S12P methylthiotransferase [Syntrophobotulus
           glycolicus DSM 8271]
          Length = 442

 Score = 43.2 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 58/153 (37%), Gaps = 23/153 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             +K+   C   C +C   ++ GS +    + +     +A++ E+  + E+I T  D   
Sbjct: 147 AYIKIAEGCNNRCSYCVIPQIKGSYRSR--TKESILGEVAWLAEQ-GVKEIIVTAQDTTR 203

Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
                     L  +L  +  I  ++ +R         P+    ELI+ +++  K   Y+ 
Sbjct: 204 YGMDIYQGLELANLLAAIAEIDGIEWIRL----LYCYPEVFTDELIEVMRKEPKICKYLD 259

Query: 211 IHANHPY-----EFS-----EEAIAAISRLANA 233
           I   H       E +     ++    I++L  A
Sbjct: 260 IPLQHANNKILTEMNRRYLKQDVERLINKLRKA 292


>gi|298504362|gb|ADI83085.1| cobalamin-binding radical SAM domain iron-sulfur cluster-binding
           oxidoreductase [Geobacter sulfurreducens KN400]
          Length = 428

 Score = 43.2 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 35/193 (18%)

Query: 55  PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           P+ R  +P  +E+   P  R + +             RY     ++    CP  C FC  
Sbjct: 132 PVYRAPVPT-DEILSAPWPRREILA----------GRRYLTTQTVQASRGCPYDCSFCT- 179

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
              V    G     +D +  LA I+      +++    D L+    + + +L+ L  +  
Sbjct: 180 ---VTPYFGRTFRYRDPDDILAEIRSFR--RKLVVFLDDNLLGDPIKARPILRGLAEMD- 233

Query: 175 VQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIA-------IHANHPYEFSEEAI- 224
              +R+ S+  +    R   +PEL++ + ++G              HAN     +  +  
Sbjct: 234 ---VRWGSQTNL----RFAEDPELLKLVADSGCIGLFVGIESVTGSHANMAKSGTRYSQT 286

Query: 225 AAISRLANAGIIL 237
             + R+ +AGIIL
Sbjct: 287 DLMKRVRDAGIIL 299


>gi|293115612|ref|ZP_05792317.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Butyrivibrio crossotus
           DSM 2876]
 gi|292809090|gb|EFF68295.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Butyrivibrio crossotus
           DSM 2876]
          Length = 444

 Score = 43.2 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 28/132 (21%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  +C +C     +       + S+  +  +A I+    S   EV+ TG
Sbjct: 146 HTRAYVKIQDGCNRFCSYC-----IIPYVRGRIRSRKPDDVMAEIKRVAASGCKEVVLTG 200

Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
                      D    S  +L  V++ +  I+ ++ +R  S    ++P  +  E ++ L 
Sbjct: 201 IHLSSYGLDFKD----STVKLIDVIEAVNRIEGIERIRLGS----LEPLIVTEEFVRRLA 252

Query: 202 EAGKPVYIAIHA 213
           +  K   I  H 
Sbjct: 253 KCKK---ICPHF 261


>gi|323698700|ref|ZP_08110612.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio sp.
           ND132]
 gi|323458632|gb|EGB14497.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio
           desulfuricans ND132]
          Length = 422

 Score = 43.2 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 28/182 (15%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAY----IQEKSQIWEVI 148
            R+ L +   C + C +C R+    ++    ++S   +   A  Y    ++++ +I    
Sbjct: 20  GRVHLPVAPKCNIQCNYCNRKYDCVNESRPGVTSGVLKPFQAAEYMEKVLEKEPRITVAG 79

Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIVDPQ----------RINPEL 196
             G GDP     + L+     L   KH +++    +    + P            +   +
Sbjct: 80  IAGPGDPFANPAETLE--TMRLLNAKHPELIFCLSTNGMGILPYLDDIAELGVSHVTITI 137

Query: 197 IQCLKEAGKPVY-------IAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGIN 248
                  G  +Y       +  H     E   +    AI  L   GI +   S+++ GIN
Sbjct: 138 SAVDPAIGAQIYAWVKDGNVVYHGEKGAEILLDRQLKAIKGLKERGITVKINSIVIPGIN 197

Query: 249 DD 250
           D 
Sbjct: 198 DH 199


>gi|325847803|ref|ZP_08170025.1| tRNA methylthiotransferase YqeV [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480821|gb|EGC83874.1| tRNA methylthiotransferase YqeV [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 432

 Score = 43.2 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 20/120 (16%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT-- 150
            R  +K+   C +YC +C             ++S+D  + +   +    +   E++ T  
Sbjct: 142 TRAYIKIQDGCNMYCSYCLI-----PYARGNIASRDLVSIIDEAKRLRDNGFKEIVLTGI 196

Query: 151 -----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                G D L L+   +  V++ +  I  ++ +R  S    ++P+ I+ E +Q +K+  K
Sbjct: 197 HVASYGKD-LDLNISLID-VIEHISKIDGIERIRLSS----MEPRHIDREFLQRMKDTKK 250


>gi|323476926|gb|ADX82164.1| Radical SAM domain protein [Sulfolobus islandicus HVE10/4]
          Length = 394

 Score = 43.2 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 42/239 (17%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           + +  +P+   L  + EE      ++    +   + +      L L + C   C +CF++
Sbjct: 33  LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
              G +K   +S K     + YI++  +  +V  T  GG+PL L  ++++++ + L  +K
Sbjct: 91  ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
           +       S   + +   +  ++ + L   G         + P E  +E      R    
Sbjct: 147 Y-------SFSVVTNGSLLTRKIAERLIPLGLTYAQIT-LDGPKEVHDE-----RRFFVR 193

Query: 234 G-----IILLS----Q---SVLLKGINDDPEILA---NLMRTFVELRI-----KPYYLH 272
           G     +I+ +    Q    V+L+ IN D + L     L+       I      P+ +H
Sbjct: 194 GKGSFDVIVKNLKEVQDLIKVVLR-INIDVKNLTEIEELLDELKREGINKVRLDPHLVH 251


>gi|323474023|gb|ADX84629.1| Radical SAM domain protein [Sulfolobus islandicus REY15A]
          Length = 394

 Score = 43.2 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 42/239 (17%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           + +  +P+   L  + EE      ++    +   + +      L L + C   C +CF++
Sbjct: 33  LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
              G +K   +S K     + YI++  +  +V  T  GG+PL L  ++++++ + L  +K
Sbjct: 91  ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
           +       S   + +   +  ++ + L   G         + P E  +E      R    
Sbjct: 147 Y-------SFSVVTNGSLLTRKIAERLIPLGLTYAQIT-LDGPKEVHDE-----RRFFVR 193

Query: 234 G-----IILLS----Q---SVLLKGINDDPEILA---NLMRTFVELRI-----KPYYLH 272
           G     +I+ +    Q    V+L+ IN D + L     L+       I      P+ +H
Sbjct: 194 GKGSFDVIVKNLKEVQDLIKVVLR-INIDVKNLTEIEELLDELKREGINKVRLDPHLVH 251


>gi|210623789|ref|ZP_03294049.1| hypothetical protein CLOHIR_02000 [Clostridium hiranonis DSM 13275]
 gi|210153371|gb|EEA84377.1| hypothetical protein CLOHIR_02000 [Clostridium hiranonis DSM 13275]
          Length = 465

 Score = 43.2 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 51/245 (20%), Positives = 101/245 (41%), Gaps = 48/245 (19%)

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRRE 116
           Q     +E+  L EE      ++N+      VHR P    + L + H C + C++CF ++
Sbjct: 62  QVEEAWDEIANLEEEGL-LYTEDNYQFHPAFVHREPVVKALCLNVAHDCNLKCKYCFAKQ 120

Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYI- 172
                K  ++S +  + AL ++   S      ++ F GG+PL ++ + ++++++  R I 
Sbjct: 121 GNFGGKPELMSFEVGKRALDFLVANSGSRRNLDIDFFGGEPL-MNFEVVKQLVEYGRSIE 179

Query: 173 -KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
            +H + +RF       +   +N E+I  + E    V +++          +   A++   
Sbjct: 180 KEHGKNMRF---TITTNGLLLNDEIIDYINENMHNVVLSL----------DGRKAVNDNM 226

Query: 232 NAGIILLSQSVLLKGIND--DPEILANLMRTFVELRIKP----YYLH------HPDLAAG 279
                          IND    +++   M+  VE R  P    YY+       + D +  
Sbjct: 227 RM------------TINDKGSYDVIVPKMQKLVEKR--PKDKYYYVRGTFTRENLDFSKD 272

Query: 280 TSHFR 284
             HFR
Sbjct: 273 ILHFR 277


>gi|182414976|ref|YP_001820042.1| radical SAM domain-containing protein [Opitutus terrae PB90-1]
 gi|177842190|gb|ACB76442.1| Radical SAM domain protein [Opitutus terrae PB90-1]
          Length = 351

 Score = 43.2 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 40/102 (39%), Gaps = 10/102 (9%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRR------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           +P  +   + + C + C  C +            ++G  L+++D             I  
Sbjct: 5   FPAFVSFTVTNACNLRCAMCGQWSPAGYIRSGRGRRGHPLTAEDWMRLADEAAAH-GIKS 63

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH-VQILRFHSRVPIV 187
           ++  GG+P +L    +Q++L+ L  +   + I    +R+   
Sbjct: 64  ILLRGGEPFMLP--GIQRLLEHLHDLGMFISIDTNGTRLAAF 103


>gi|76809653|ref|YP_334300.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 1710b]
 gi|76579106|gb|ABA48581.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 1710b]
          Length = 370

 Score = 43.2 bits (101), Expect = 0.060,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 64/197 (32%), Gaps = 47/197 (23%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R + G          +L+ ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99

Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191
           PL+   K L+ +++ L  +  V                    + LR    SRV +     
Sbjct: 100 PLL--RKNLEFLIERLANMTTVDGRPLDITLTTNGSLLMRKAKSLRDAGLSRVTVSL--- 154

Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDD 250
               L   L +           +H    S + +  I     AG   +    V+ +G ND 
Sbjct: 155 --DALDDTLFKLR---------DHADFASADVLDGIFAAHAAGLAPVKVNMVVKRGTND- 202

Query: 251 PEILANLMRTFVELRIK 267
              +  + R F    + 
Sbjct: 203 -AEIVPMARRFKGTGVV 218


>gi|295706646|ref|YP_003599721.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium
           DSM 319]
 gi|294804305|gb|ADF41371.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium
           DSM 319]
          Length = 452

 Score = 43.2 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 11/124 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
             R  LK+   C  +C FC      G  +           +  +       +I    I T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVVAQAQQLVD--AGYKEIVLTGIHT 199

Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           GG    +    L ++L+ L   +K ++ +R  S    ++  +I  E+I+ L ++ + V  
Sbjct: 200 GGYGEDMKDYNLAQLLRDLESQVKGLKRIRISS----IEASQITDEVIEVLDQS-EMVVR 254

Query: 210 AIHA 213
            +H 
Sbjct: 255 HLHI 258


>gi|294501299|ref|YP_003564999.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium QM
           B1551]
 gi|294351236|gb|ADE71565.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium QM
           B1551]
          Length = 452

 Score = 43.2 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 11/124 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
             R  LK+   C  +C FC      G  +           +  +       +I    I T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVVAQAQQLVD--AGYKEIVLTGIHT 199

Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           GG    +    L ++L+ L   +K ++ +R  S    ++  +I  E+I+ L ++ + V  
Sbjct: 200 GGYGEDMKDYNLAQLLRDLESQVKGLKRIRISS----IEASQITDEVIEVLDQS-EMVVR 254

Query: 210 AIHA 213
            +H 
Sbjct: 255 HLHI 258


>gi|256544964|ref|ZP_05472334.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Anaerococcus vaginalis ATCC 51170]
 gi|256399351|gb|EEU12958.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Anaerococcus vaginalis ATCC 51170]
          Length = 166

 Score = 43.2 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 9/89 (10%)

Query: 88  GIVHRYPD------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           G + +Y        R    +   C   C+ CF +E +    G + + K T+  + Y+++ 
Sbjct: 4   GQIRKYDVANGPGIRTSFFVTG-CHANCKNCFNKEYMDPNFGNLWTDKQTQEIITYLKKD 62

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
            +I  +   GG+P   S + L K++K +R
Sbjct: 63  -EIEGLTILGGEPFE-STEDLIKIVKKIR 89


>gi|153852905|ref|ZP_01994342.1| hypothetical protein DORLON_00324 [Dorea longicatena DSM 13814]
 gi|149754547|gb|EDM64478.1| hypothetical protein DORLON_00324 [Dorea longicatena DSM 13814]
          Length = 481

 Score = 43.2 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 71/195 (36%), Gaps = 52/195 (26%)

Query: 56  IARQFIPQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           I +   P  EE L  + +E +D +G    +   G++  Y           C   C FCF 
Sbjct: 65  IRK---PSGEEWLLEIDKEYDDELGVEFEN---GLMSEYR---------SCSNKCMFCFI 109

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
            +M    + T+           Y ++      + F  G+ + +++ +   +      I H
Sbjct: 110 DQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITMTNMKQADI----DRIIH 152

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234
           +Q+       PI    +     ++C           +H      F+ E +  +  L  A 
Sbjct: 153 MQL------APINISVQTTNPELRC---------KMLH----NRFAGEKLKFLQDLYEAH 193

Query: 235 IILLSQSVLLKGIND 249
           I +  Q VL KG+ND
Sbjct: 194 IEMNGQIVLCKGVND 208


>gi|315651093|ref|ZP_07904127.1| radical SAM domain protein [Eubacterium saburreum DSM 3986]
 gi|315486683|gb|EFU77031.1| radical SAM domain protein [Eubacterium saburreum DSM 3986]
          Length = 351

 Score = 43.2 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 51/166 (30%), Gaps = 33/166 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-------IFTG 151
             +   C   C+ C+   +        L S   +             E          TG
Sbjct: 9   WHITDECDQRCKHCY---IFSGGNYNCLKSMSWQEMQDTFNNCLDFCETYGRTPYFYLTG 65

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA- 210
           GDP++         L  L    +++         + +P  +N ++ + LKE G   Y   
Sbjct: 66  GDPILHPD---FWKLLELFSENNIKF------TIMGNPFHLNDDVCKKLKEYGCEKYQMS 116

Query: 211 ------IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
                  H     P  +    +  I  L  AGI     SV++  ++
Sbjct: 117 IDGIRETHDWFRKPGSYDC-TLEKIGCLNKAGIR----SVIMTTVS 157


>gi|311069144|ref|YP_003974067.1| YqeV protein [Bacillus atrophaeus 1942]
 gi|310869661|gb|ADP33136.1| YqeV [Bacillus atrophaeus 1942]
          Length = 451

 Score = 43.2 bits (101), Expect = 0.061,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     +L S+D E  +   Q+   +   E++ T 
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196

Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   +      K+L+ L   +  ++ +R  S    ++  +I  E+I+ L  +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLRELDARVDGLKRIRISS----IEASQITDEVIEVLDRS 249

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 250 DK-IVRHLHI 258


>gi|86604900|ref|YP_473663.1| molybdenum cofactor biosynthesis protein A [Synechococcus sp.
           JA-3-3Ab]
 gi|86553442|gb|ABC98400.1| molybdenum cofactor biosynthesis protein A [Synechococcus sp.
           JA-3-3Ab]
          Length = 312

 Score = 43.2 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 27/165 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + L   C + CR+C         K + L+ +  +  +  + +   I EV  TGG+PL+  
Sbjct: 16  VSLTDQCNLRCRYCMPLHPEFLDKSSYLTPQQYKEIIGELLDY-GIEEVRITGGEPLVRQ 74

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
                +V++ L  +K +  L   +   ++   R    L     +A   + + +       
Sbjct: 75  D--FDEVIQELAKLK-IPSLSLTTNGLLL--HRYWDVL-----KAANVLNLNVSL---DS 121

Query: 219 FSEEAIAAISR-------LAN------AGIILLSQSVLLKGINDD 250
                 AAI+R       L N       G  L   +V+++GIND 
Sbjct: 122 LQPSTQAAIARRDCLADILRNIQEGIARGFSLKVNTVVMRGINDC 166


>gi|221198572|ref|ZP_03571617.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans CGD2M]
 gi|221207801|ref|ZP_03580808.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans CGD2]
 gi|221172298|gb|EEE04738.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans CGD2]
 gi|221181023|gb|EEE13425.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           multivorans CGD2M]
          Length = 367

 Score = 43.2 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 45/195 (23%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154
           L ++  C   C +C  RE+ GS    +  +     A L  I        + ++  TGG+P
Sbjct: 39  LSVIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLERIARAFVSLGVEKIRITGGEP 98

Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192
           L+   + L+ +++ L  +  V                    + LR    +RV +     +
Sbjct: 99  LL--RRHLETLIERLAALTTVHGRPVELALTTNGALLAAKARTLRDAGLARVTVSL-DAL 155

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251
           +  + + + +A  PV   +             A I     AG   +   +V+ +G NDD 
Sbjct: 156 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGANDD- 201

Query: 252 EILANLMRTFVELRI 266
             +  L+R F    +
Sbjct: 202 -QMLPLVRHFRHTGV 215


>gi|218883344|ref|YP_002427726.1| Fe-S oxidoreductase family protein [Desulfurococcus kamchatkensis
           1221n]
 gi|218764960|gb|ACL10359.1| Fe-S oxidoreductase family protein [Desulfurococcus kamchatkensis
           1221n]
          Length = 439

 Score = 43.2 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 28/157 (17%)

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL--LKLLHVCPVYCRFCFRREMVGSQ 121
           +EE  ++   R  PI  + H P       Y  RI+  L++   CP  C +C     V   
Sbjct: 143 REEDKVIATGRARPIDLDKHDPFP-----YWRRIINPLEITRGCPYGCLYC----QVSYI 193

Query: 122 KGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLI-------------LSHKRLQKVL 166
            G     +  E  + Y++E ++I   +  F   D L              L  + L  + 
Sbjct: 194 HGMSYRHRSIEKIVFYVKEMARIGVRDYRFITPDSLSYGLTKISREPDTGLIEELLSSIH 253

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
             LR I     + + S    V P+ +N ++++ L++ 
Sbjct: 254 SALRSIG--GRIFYGSFPSEVRPEHVNKDVVRVLRKY 288


>gi|14520330|ref|NP_125805.1| molybdenum cofactor biosynthesis protein A [Pyrococcus abyssi GE5]
 gi|18203544|sp|Q9V2G2|MOAA_PYRAB RecName: Full=Probable molybdenum cofactor biosynthesis protein A
 gi|5457545|emb|CAB49036.1| moaA molybdenum cofactor biosynthesis protein [Pyrococcus abyssi
           GE5]
          Length = 306

 Score = 43.2 bits (101), Expect = 0.062,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 67/174 (38%), Gaps = 32/174 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + L   C + C +C R   +       +  ++ E  +  I  +  I +V  TGG+P I  
Sbjct: 15  ISLTKECNLNCFYCHREGQL--DGERTMKPEEIERIVR-IASRLGIKKVKLTGGEPTIRK 71

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-------------K 205
              + ++++ +R   +V  L   +    +        L + LKEAG             K
Sbjct: 72  D--IVEIIRRIR--PYVVDLSLTTNGTTLY------TLAEELKEAGLDRVNISLDTLDRK 121

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
              +    +      ++ I  I +       +    V+++GINDD   + +L+R
Sbjct: 122 KYKMITGFD----VLDQVIKGIEKATKLFYPVKLNMVVMRGINDD--EIWDLIR 169


>gi|254556403|ref|YP_003062820.1| molybdenum cofactor biosynthesis protein A [Lactobacillus plantarum
           JDM1]
 gi|254045330|gb|ACT62123.1| molybdenum cofactor biosynthesis protein A [Lactobacillus plantarum
           JDM1]
          Length = 332

 Score = 43.2 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 10/115 (8%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R  D + L +   C + C +C  +E +       VLS  +    +        + +V  T
Sbjct: 10  RLHDYVRLSITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLIENFAAM-GVSKVRIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           GG+PL+ +     ++++ ++ +  +  +   +            +L + LKEAG 
Sbjct: 69  GGEPLLRTDVV--EIVRRIKAVDGINDVSITTNGL------FLAKLAKPLKEAGL 115


>gi|28378196|ref|NP_785088.1| molybdenum cofactor biosynthesis protein A [Lactobacillus plantarum
           WCFS1]
 gi|38258047|sp|Q88WY1|MOAA_LACPL RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|28271031|emb|CAD63936.1| molybdopterin precursor synthase MoaA [Lactobacillus plantarum
           WCFS1]
          Length = 332

 Score = 43.2 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 10/115 (8%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R  D + L +   C + C +C  +E +       VLS  +    +        + +V  T
Sbjct: 10  RLHDYVRLSITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLIENFAAM-GVSKVRIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           GG+PL+ +     ++++ ++ +  +  +   +            +L + LKEAG 
Sbjct: 69  GGEPLLRTDVV--EIVRRIKAVDGINDVSITTNGL------FLAKLAKPLKEAGL 115


>gi|320450824|ref|YP_004202920.1| coenzyme PQQ synthesis protein PqqE [Thermus scotoductus SA-01]
 gi|320150993|gb|ADW22371.1| coenzyme PQQ synthesis protein PqqE [Thermus scotoductus SA-01]
          Length = 375

 Score = 43.2 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 39/222 (17%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           +YP  +  ++ + C + CR C    M     G  LS+++    +  +        ++ TG
Sbjct: 8   QYPYLVAWEVTNACLLACRHCRASAMPHPLPGE-LSTEEGLGLIEEVATYRPKPLLLLTG 66

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQCLKEAGK-PV 207
           GDPL      L  +++  R            +V   P   P  +  E +  LKEAG   +
Sbjct: 67  GDPLARPD--LLFLIQRARE--------LGLKVGLTPAATP-LLTREKVFQLKEAGVTRL 115

Query: 208 YIAIHANHPYE---FSEE------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            +++    P     F  E       +AA+     AG+     + + +   ++   +  L 
Sbjct: 116 ALSLDGASPKSHDAFRGEEGTFARTLAALGWAKEAGLPTQVNTTVTR---ENWPEIQALP 172

Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
               E  +  + L           F + +  G  ++  L  +
Sbjct: 173 DLLAEKGVVLWSLF----------FLVPVGRG-ALLKQLSAR 203


>gi|317489825|ref|ZP_07948322.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|316911074|gb|EFV32686.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
          Length = 334

 Score = 43.2 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 47/215 (21%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C + C  C++           LS ++ +  +  I   +    +IF+GG+PL+
Sbjct: 3   VSWMTTNKCNLKCVHCYQDAE--EATDKELSCEEGKKMIDEIAR-AGFKVMIFSGGEPLM 59

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG--------KP 206
                + +++         + LR     P+       I PE+   LKEAG          
Sbjct: 60  RPD--IYELVAHAAS----RGLR-----PVFGSNGTLITPEVAVRLKEAGACAMGISVDS 108

Query: 207 VYIAIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRT 260
           +    H       H Y+ +   I A      AG+    Q  L   + D + + + ++   
Sbjct: 109 LDAVKHDRFRGLEHAYDLTMAGIEAC---KQAGLPF--Q--LHTTVVDWNRDEVCDITDF 161

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
            VE+    +Y+           F + +  G+ I  
Sbjct: 162 AVEIGAMAHYVF----------FLIPVGRGKFIQE 186


>gi|282883211|ref|ZP_06291810.1| protein YqeV [Peptoniphilus lacrimalis 315-B]
 gi|281297023|gb|EFA89520.1| protein YqeV [Peptoniphilus lacrimalis 315-B]
          Length = 431

 Score = 43.2 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 21/117 (17%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQIWEVIF 149
           H+   R  +K+   C  YC +C         +GT+ S +  +     I+   +   E+I 
Sbjct: 143 HK--TRSYMKVQDGCNRYCTYCIIPY----ARGTIRSRRIGDCVREAIRLANAGYKEIIL 196

Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
           T       G D   L   RL  +++ +  +  ++ +R  S    V+P  I+ + ++ 
Sbjct: 197 TGIHVGSYGVD---LGPVRLIDLIEAIAEVDGIERIRLSS----VEPNIISEDFMRR 246


>gi|229019959|ref|ZP_04176752.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1273]
 gi|229026193|ref|ZP_04182557.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1272]
 gi|228735121|gb|EEL85752.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1272]
 gi|228741343|gb|EEL91550.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1273]
          Length = 339

 Score = 43.2 bits (101), Expect = 0.063,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRITGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIARLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDIFRNINGRNINTKPVIKGIKAAKEAGLEVKVNMVVKKGMNDH 177


>gi|225567883|ref|ZP_03776908.1| hypothetical protein CLOHYLEM_03956 [Clostridium hylemonae DSM
           15053]
 gi|225163361|gb|EEG75980.1| hypothetical protein CLOHYLEM_03956 [Clostridium hylemonae DSM
           15053]
          Length = 307

 Score = 43.2 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 31/184 (16%)

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAIHA 213
                 L+++         V+I+   +R     P  ++ ++I  L++    KPV++ +  
Sbjct: 98  YAPLPYLRRIFTEAARHPDVRIISIATR-----PDCLDKDVISMLEDIRRIKPVWVELGL 152

Query: 214 NHPYEFS----------EEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRTFV 262
              +E +               A + L +AGI ++  ++L L G  +D  ++ + +    
Sbjct: 153 QTIHEETAAFIGRGYSLPVFEQAAAMLQDAGIDVIVHTILALPG--EDLSMMLDTLHYLN 210

Query: 263 ELRI---KPYYLHHPDLAAGTSH-----FRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
              I   K   LH     A  ++     F +      +    L  +  G   P  +L   
Sbjct: 211 GAGIQGLKLQLLHVLRGTALAAYYEAHPFWIP---SMEEYFYLLGRCIGSISPDIVLHRL 267

Query: 315 GGYG 318
            G G
Sbjct: 268 TGDG 271


>gi|333029185|ref|ZP_08457246.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides coprosuis DSM 18011]
 gi|332739782|gb|EGJ70264.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides coprosuis DSM 18011]
          Length = 153

 Score = 43.2 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 7/82 (8%)

Query: 88  GIVHRYPDRILL-------KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
            I+H Y + I+             CP  C  C   E    + GT+L+ +  +  +  I  
Sbjct: 2   NILHTYSETIVDGDGIRYSIYFAGCPHRCVGCHNPESRNPKAGTLLTDEKLDKIIDEINN 61

Query: 141 KSQIWEVIFTGGDPLILSHKRL 162
              +  +  +GGDP     + L
Sbjct: 62  NPLLDGITLSGGDPFFNPIEML 83


>gi|110799003|ref|YP_694570.1| thiamine biosynthesis protein ThiH [Clostridium perfringens ATCC
           13124]
 gi|110673650|gb|ABG82637.1| putative thiazole biosynthesis protein ThiH [Clostridium
           perfringens ATCC 13124]
          Length = 473

 Score = 43.2 bits (101), Expect = 0.064,   Method: Composition-based stats.
 Identities = 46/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +      K   L+ +     +  ++        +  G DP+   
Sbjct: 91  LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150

Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202
              L  +L  ++ I  ++     +R   R+ +        +  + LK+            
Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAATSVEDY-KRLKDAEIGTYILFQET 203

Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261
             KP Y  +H + P         A+ R   AGI  +   V L G+ D   E LA LM   
Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262

Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307
                  + P+ L  P       +       + +  E+ +KIVA L+     L  P
Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312


>gi|310780511|ref|YP_003968843.1| ribonucleoside-triphosphate reductase class III activase subunit
           [Ilyobacter polytropus DSM 2926]
 gi|309749834|gb|ADO84495.1| ribonucleoside-triphosphate reductase class III activase subunit
           [Ilyobacter polytropus DSM 2926]
          Length = 166

 Score = 43.2 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C  YC+ C   E      G VL     +  ++ I     +  V  +GGDP  +  + L
Sbjct: 24  SGCSHYCQGCHNPETWKGDIGEVLDETYMKKIISQISNNPLLDGVTLSGGDPFFIPEELL 83

Query: 163 QKVLKTLRYIKH 174
              L+ L+   H
Sbjct: 84  G-FLRRLKEETH 94


>gi|300858354|ref|YP_003783337.1| coenzyme PQQ synthesis protein [Corynebacterium pseudotuberculosis
           FRC41]
 gi|300685808|gb|ADK28730.1| coenzyme PQQ synthesis protein [Corynebacterium pseudotuberculosis
           FRC41]
 gi|302206071|gb|ADL10413.1| Predicted Fe-S oxidoreductase [Corynebacterium pseudotuberculosis
           C231]
          Length = 412

 Score = 43.2 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 50/226 (22%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-V 147
           I H+ P   + ++   C + C+ C          G + + +   A L  +    +    V
Sbjct: 34  INHK-PFIAIWEVTRACGLVCKHCRADAQHKPHPGQLTTKQGF-ALLKDLASYDKPRPLV 91

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCL 200
           + TGGDP     + L+++++            + ++        P V P R+  E I  L
Sbjct: 92  VLTGGDPF--EREDLEELVE------------YGTQQGLSVSLSPSVTP-RLTSERIHRL 136

Query: 201 KEA-GKPVYIAIHANHPY----------EFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
            +  GK + +++                 F      A   + +AG  L   S L K   +
Sbjct: 137 HDLGGKAMSMSLDGATAQTHDAFRGFSGTFDATVSMA-QTILDAGFRLQINSTLTK---N 192

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
           +      L++T +E+  K +Y+           F +    G  + A
Sbjct: 193 NIREAPLLLKTVMEMGAKMWYVF----------FLVPTGRGAALHA 228


>gi|160879625|ref|YP_001558593.1| molybdenum cofactor biosynthesis protein A [Clostridium
           phytofermentans ISDg]
 gi|160428291|gb|ABX41854.1| molybdenum cofactor biosynthesis protein A [Clostridium
           phytofermentans ISDg]
          Length = 332

 Score = 43.2 bits (101), Expect = 0.065,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 59/160 (36%), Gaps = 20/160 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C   ++   +  ++L+ ++             I ++  TGG+P++  
Sbjct: 14  ISITDRCNLRCTYCMPEDVEKLEHESILTYEEILRICKS-ASSLGIRKIKITGGEPMVRK 72

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA---GKPVYIAI---- 211
                K++  ++ I  ++ +   +         +  E ++ L +    G  V +      
Sbjct: 73  DAV--KLMANIKAIPGIEFVTLTTNGV------LLEEHVEELAKIPLDGVNVSLDTLNTD 124

Query: 212 ---HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
                    EF +     I +L  AGI      V  KG+N
Sbjct: 125 TFKKITRRDEFLK-VWNGIQKLIEAGIPTKINCVPQKGVN 163


>gi|292670086|ref|ZP_06603512.1| radical SAM domain protein [Selenomonas noxia ATCC 43541]
 gi|292648274|gb|EFF66246.1| radical SAM domain protein [Selenomonas noxia ATCC 43541]
          Length = 346

 Score = 43.2 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
             + C +YC  C+R    G +    LS+++ +  L  I + +    +IF+GG+PL     
Sbjct: 21  TTNACNMYCAHCYRDA--GCRAEEELSTEEAKKLLREIAK-AGFRIMIFSGGEPLTRPDI 77

Query: 160 KRLQKVLKTLRYIK 173
             L    + L  I 
Sbjct: 78  LELVSYARGLGLIP 91


>gi|238059271|ref|ZP_04603980.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149]
 gi|237881082|gb|EEP69910.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149]
          Length = 399

 Score = 43.2 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 57/169 (33%), Gaps = 31/169 (18%)

Query: 94  PDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWE 146
           P   L   +HV  C + C FC      G+    V +      +  E     +    +   
Sbjct: 43  PRDALFLYVHVPFCEMRCGFCNLFTRTGAPAEQVTAYLRQLRRQAERVADALGGDPRHAR 102

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCL 200
           V F GG P  L+   L ++         +      +R+P V       P    P+ +  L
Sbjct: 103 VAFGGGTPTYLTAGELTELFD-------IATSTLGARLPGVPLSVETSPATATPDRLAVL 155

Query: 201 KEAG-KPVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLS 239
              G   V I +          A  P   + E  AA+  + +A I LL+
Sbjct: 156 AAHGATRVSIGVQSFLDAEARAAGRPQRRT-EVEAALGAIRDAAIPLLN 203


>gi|78222094|ref|YP_383841.1| MiaB-like tRNA modifying enzyme [Geobacter metallireducens GS-15]
 gi|78193349|gb|ABB31116.1| MiaB-like tRNA modifying enzyme [Geobacter metallireducens GS-15]
          Length = 431

 Score = 43.2 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 17/127 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  L++ + C  +C +C      G  +    S  +  A +     +    EV+ T   
Sbjct: 140 HTRAFLQVQNGCDAFCSYCIVPYARGRSRSVSFS--EALAGIRNFAAQ-GFREVVLTGIH 196

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
               G D  +     L  +L+     K V  LR  S    V+P  +   L+  L  + + 
Sbjct: 197 LGAYGLD--LAPPTNLLALLEASEAEKAVPRLRVGS----VEPNELTDALVDFLARS-ET 249

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 250 VCPHLHI 256


>gi|284996927|ref|YP_003418694.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5]
 gi|284444822|gb|ADB86324.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5]
          Length = 394

 Score = 43.2 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 42/234 (17%), Positives = 93/234 (39%), Gaps = 32/234 (13%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           + +  +P+   L  + EE      ++    +   + +      L L + C   C +CF++
Sbjct: 33  LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
              G +K   +S K     + YI++  +  +V  T  GG+PL L  ++++++ + L  +K
Sbjct: 91  ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
           +       S   + +   +  ++ + L   G         + P E  ++    +    + 
Sbjct: 147 Y-------SFSVVTNGSLLTRKIAERLISLGLTYAQIT-LDGPKEVHDKRRFFVRGRGSF 198

Query: 234 GIILLS----Q---SVLLKGINDDPEILA---NLMRTFVELRI-----KPYYLH 272
            +I+ +    Q    V+L+ IN D + L     L+       I      P+ +H
Sbjct: 199 DVIVKNLKEVQDLIKVVLR-INIDVKNLTEIEELLDELKREGINKVRLDPHLVH 251


>gi|241676232|ref|XP_002400329.1| molybdenum cofactor biosynthesis pathway protein, putative [Ixodes
           scapularis]
 gi|215504220|gb|EEC13714.1| molybdenum cofactor biosynthesis pathway protein, putative [Ixodes
           scapularis]
          Length = 381

 Score = 43.2 bits (101), Expect = 0.066,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 13/123 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R    + + L   C + C +C   E V       L S D    LA +     + +V  TG
Sbjct: 62  RKHSYLRISLTEKCSLRCVYCMPAEGVPLTPNEKLLSSDEIVHLATLFATFGVNKVRLTG 121

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+PL+        +++ L  I  ++ L   +   +          +  LK+AG       
Sbjct: 122 GEPLVRKDTL--DIVEKLSQIPQLETLGMTTNGLV------LSRKLADLKKAGL-----T 168

Query: 212 HAN 214
           H N
Sbjct: 169 HLN 171


>gi|300813542|ref|ZP_07093873.1| MiaB-like protein [Peptoniphilus sp. oral taxon 836 str. F0141]
 gi|300512290|gb|EFK39459.1| MiaB-like protein [Peptoniphilus sp. oral taxon 836 str. F0141]
          Length = 431

 Score = 43.2 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 21/117 (17%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQIWEVIF 149
           H+   R  +K+   C  YC +C     +   +GT+ S +  +     I+   +   E+I 
Sbjct: 143 HK--TRSYMKVQDGCNRYCTYCI----IPYARGTIRSRRIGDCVREAIRLANAGYKEIIL 196

Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
           T       G D   L   RL  +++ +  +  ++ +R  S    V+P  I+ + ++ 
Sbjct: 197 TGIHVGSYGVD---LGPVRLIDLIEAIAEVDGIERIRLSS----VEPNIISEDFMRR 246


>gi|89097965|ref|ZP_01170852.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. NRRL
           B-14911]
 gi|89087467|gb|EAR66581.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. NRRL
           B-14911]
          Length = 309

 Score = 43.2 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 32/146 (21%)

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL--- 178
           K  +LS ++ E   +   +   I +   TGG+PL+     L ++++ L  I  V  +   
Sbjct: 15  KDQLLSFEEIEKLASVFAKAFGIQKFRLTGGEPLMRKD--LPQLVEKLSSIPGVDDIAMT 72

Query: 179 -------RF-------HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224
                  R+         R   +    ++ EL   +   G  V             ++ +
Sbjct: 73  TNGILLPRYAKELKSAGLRRVSISLDSLDDELFGKINGRGIKV-------------DQVL 119

Query: 225 AAISRLANAGIILLSQSVLLKGINDD 250
             I   A AG+ +    V+ KG+ND 
Sbjct: 120 KGIDAAAEAGLKVKINMVVQKGVNDH 145


>gi|119356260|ref|YP_910904.1| RNA modification protein [Chlorobium phaeobacteroides DSM 266]
 gi|119353609|gb|ABL64480.1| RNA modification enzyme, MiaB family [Chlorobium phaeobacteroides
           DSM 266]
          Length = 446

 Score = 43.2 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 51/150 (34%), Gaps = 25/150 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  LK+   C   C +C     R          +++      A  Y        E++ 
Sbjct: 146 RTRAFLKIQDGCDYGCAYCTIPFARGRSRSFSPDDIIAQASALVASGY-------REIVL 198

Query: 150 TG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG   GD       RL  +L+ L  +  V  +R  S    ++P  ++  LI  +  +   
Sbjct: 199 TGVNIGD-YRYRGVRLAALLRMLEKVP-VARIRISS----IEPDILDDALIAVVAASE-- 250

Query: 207 VYIAIHANHPYE--FSEEAIAAISRLANAG 234
             IA H + P +        A   R   AG
Sbjct: 251 -IIAPHFHLPLQSGSDAVLRAMCRRYDTAG 279


>gi|212550840|ref|YP_002309157.1| hypothetical protein CFPG_483 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212549078|dbj|BAG83746.1| conserved hypothetical protein [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 477

 Score = 43.2 bits (101), Expect = 0.067,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 51/116 (43%), Gaps = 13/116 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDPLI 156
           ++     C   C +C   +    +KG  +S    +  +  I E    I ++ F GG+PL 
Sbjct: 92  MIVPTVRCNSNCIYCQASKKNLIEKGFDMSKGIAKKIVKMIFESPSSIIKIEFQGGEPLT 151

Query: 157 LSHKRLQKVLKTLRYI-----KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
            + + +Q +++   +I     KH++ +   + +       I P++++ LK+    +
Sbjct: 152 -NFEMVQYIMEEAEWINLFKKKHLEFV-ICTNI-----SLITPKILRYLKKHKCHI 200


>gi|331084033|ref|ZP_08333140.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Lachnospiraceae bacterium 6_1_63FAA]
 gi|330402395|gb|EGG81965.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Lachnospiraceae bacterium 6_1_63FAA]
          Length = 491

 Score = 43.2 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 28/156 (17%), Positives = 68/156 (43%), Gaps = 20/156 (12%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
             + + I   +  D I +    P++    +YP +  + ++  C  +C +C    + G ++
Sbjct: 172 LSDRMIIDIWKDTDKIVE--DLPVE---RKYPFKSGVNIMFGCNNFCSYCIVPYVRGRER 226

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQ 176
               + KD    +  + +   + EV+  G + +    K L +      +L  +  I+ ++
Sbjct: 227 SR--NPKDIVREIERLVKD-GVVEVMLLGQN-VNSYGKNLDEPMTFAQLLTEIEKIEGLK 282

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            +RF +      P+ ++ ELI+ +K + K +   +H
Sbjct: 283 RIRFMTSH----PKDLSDELIEVMKNS-KKICKHLH 313


>gi|313900870|ref|ZP_07834360.1| iron-only hydrogenase maturation rSAM protein HydE [Clostridium sp.
           HGF2]
 gi|312954290|gb|EFR35968.1| iron-only hydrogenase maturation rSAM protein HydE [Clostridium sp.
           HGF2]
          Length = 362

 Score = 43.2 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 62/204 (30%), Gaps = 43/204 (21%)

Query: 90  VHRYP-----DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            HRY       R L++  + C   C +C  R      +   L  +D              
Sbjct: 46  AHRYYGNKVYTRGLIEFSNYCRNDCYYCGIRRSNSHAQRYRLKKEDILTCCDEGYNLGFR 105

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA- 203
             V+ +G D    + + L +++  ++            R P      I   L +  KE+ 
Sbjct: 106 TFVLQSGEDGYY-TDELLIEIITDIKR-----------RYPDCA---ITLSLGEKEKESY 150

Query: 204 -------------GKPVYIAIHAN--HPYEFSEEAIAAISRLANA-------GIILLSQS 241
                              A H    HP E + E      +   A       GI++ S S
Sbjct: 151 QCYYDAGADRYLLRHETSNAQHYRCLHPKELTSEHRKQCLKDLKAIGFQTGCGIMVGSPS 210

Query: 242 VLLKGINDDPEILANLMRTFVELR 265
             LK I +D   +  L    V + 
Sbjct: 211 QTLKHIVEDLHFMKELQPEMVGIG 234


>gi|238927734|ref|ZP_04659494.1| radical SAM [Selenomonas flueggei ATCC 43531]
 gi|238884450|gb|EEQ48088.1| radical SAM [Selenomonas flueggei ATCC 43531]
          Length = 384

 Score = 43.2 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
           + + C +YC  C+R    G +    LS+++ +  L  I + +    +IF+GG+PL     
Sbjct: 59  VTNACNMYCAHCYRDA--GCRADEELSTEEGKKLLREIAK-AGFRIMIFSGGEPLSRPDI 115

Query: 160 KRLQKVLKTLRYIK 173
             L    + L  I 
Sbjct: 116 IELVAYARGLGLIP 129


>gi|269797767|ref|YP_003311667.1| radical SAM protein [Veillonella parvula DSM 2008]
 gi|269094396|gb|ACZ24387.1| Radical SAM domain protein [Veillonella parvula DSM 2008]
          Length = 399

 Score = 43.2 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 30/167 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155
                 CP  C FC +  + G    + L+ +  +  +  Y+  +   + WEV F GG   
Sbjct: 10  FIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWEVAFYGG-SF 68

Query: 156 ILSHKRLQK-VLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
               K LQ  +L     +     +  +R  +R     P  +  E I  L+  G K V + 
Sbjct: 69  TAIIKDLQHKLLMPAYEMLQQGLIDGIRCSTR-----PDAVGDEAITLLQSYGVKTVELG 123

Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           + +            H  +   E + A++RL +  + +  Q  LL G
Sbjct: 124 VQSMNDGILVDAKRGHTAQ---EVVEAVTRLKHRDMTVGVQ--LLPG 165


>gi|154148690|ref|YP_001406630.1| hypothetical protein CHAB381_1072 [Campylobacter hominis ATCC
           BAA-381]
 gi|153804699|gb|ABS51706.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381]
          Length = 414

 Score = 43.2 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 51/130 (39%), Gaps = 16/130 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQI----W 145
           +   +  +K+   C   C +C    + G  +     L  ++ +  +A     ++I     
Sbjct: 130 KSHTKAFIKIQEGCDFNCSYCIIPSVRGKSRSVDENLIIEEVKKIIA--GNHTEIVLTGT 187

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            +   G D    +   L ++L+ L  I  ++ +R  S    ++P +I+ +  + L E   
Sbjct: 188 NIGSYGKD----NGSSLGELLQKLGKISGLKRIRLGS----IEPSQIDEKFREILDEPWL 239

Query: 206 PVYIAIHANH 215
             ++ I   H
Sbjct: 240 EKHLHIALQH 249


>gi|326389860|ref|ZP_08211424.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus JW
           200]
 gi|325994128|gb|EGD52556.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus JW
           200]
          Length = 455

 Score = 43.2 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
             R  +K+   C  YC +C     +       + S+D +  L  ++    S   E++ T 
Sbjct: 161 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 215

Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                 G D   L +  L  ++K +  I  ++ +R  S  P         E ++ +    
Sbjct: 216 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 268

Query: 205 K 205
           K
Sbjct: 269 K 269


>gi|307266431|ref|ZP_07547967.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918539|gb|EFN48777.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 455

 Score = 43.2 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
             R  +K+   C  YC +C     +       + S+D +  L  ++    S   E++ T 
Sbjct: 161 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 215

Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                 G D   L +  L  ++K +  I  ++ +R  S  P         E ++ +    
Sbjct: 216 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 268

Query: 205 K 205
           K
Sbjct: 269 K 269


>gi|256751980|ref|ZP_05492850.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|320116201|ref|YP_004186360.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|256749185|gb|EEU62219.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus
           CCSD1]
 gi|319929292|gb|ADV79977.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 455

 Score = 43.2 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
             R  +K+   C  YC +C     +       + S+D +  L  ++    S   E++ T 
Sbjct: 161 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 215

Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                 G D   L +  L  ++K +  I  ++ +R  S  P         E ++ +    
Sbjct: 216 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 268

Query: 205 K 205
           K
Sbjct: 269 K 269


>gi|167039974|ref|YP_001662959.1| MiaB-like tRNA modifying protein [Thermoanaerobacter sp. X514]
 gi|300914064|ref|ZP_07131380.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X561]
 gi|307724703|ref|YP_003904454.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X513]
 gi|166854214|gb|ABY92623.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X514]
 gi|300888999|gb|EFK84145.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X561]
 gi|307581764|gb|ADN55163.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X513]
          Length = 449

 Score = 43.2 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
             R  +K+   C  YC +C     +       + S+D +  L  ++    S   E++ T 
Sbjct: 155 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 209

Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                 G D   L +  L  ++K +  I  ++ +R  S  P         E ++ +    
Sbjct: 210 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 262

Query: 205 K 205
           K
Sbjct: 263 K 263


>gi|167037786|ref|YP_001665364.1| MiaB-like tRNA modifying protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|166856620|gb|ABY95028.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
          Length = 467

 Score = 43.2 bits (101), Expect = 0.068,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150
             R  +K+   C  YC +C     +       + S+D +  L  ++    S   E++ T 
Sbjct: 173 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 227

Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                 G D   L +  L  ++K +  I  ++ +R  S  P         E ++ +    
Sbjct: 228 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 280

Query: 205 K 205
           K
Sbjct: 281 K 281


>gi|153951587|ref|YP_001397915.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939033|gb|ABS43774.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 416

 Score = 43.2 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 18/132 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     +  +L   +   A  Y        E++ 
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184

Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +     L +   L K+L+ +  I  ++ +R  S    ++P +++   ++ L E    
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQLDESFLEILDETWLE 240

Query: 207 VYIAIHANHPYE 218
            ++ I   H  E
Sbjct: 241 RHLHIALQHTSE 252


>gi|269837323|ref|YP_003319551.1| MiaB-like tRNA modifying enzyme [Sphaerobacter thermophilus DSM
           20745]
 gi|269786586|gb|ACZ38729.1| MiaB-like tRNA modifying enzyme [Sphaerobacter thermophilus DSM
           20745]
          Length = 449

 Score = 43.2 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 27/156 (17%), Positives = 52/156 (33%), Gaps = 33/156 (21%)

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYI 138
           ++  P++ +  R   R ++K+   C  +C +C      G+ +    +   +  + A+   
Sbjct: 137 DSDEPVEHVETR--TRRMIKIQEGCRAHCTYCIIPRARGAPRNVAPAEVVRRVQEAID-- 192

Query: 139 QEKSQIWEVIFTGGDPLILSHK------RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
                  EV+ TG               RL  +L+ +     ++ LR  S    V P  I
Sbjct: 193 ---EGYREVVLTGTHVGTYKWPEGDRTLRLADLLELVLEATTIERLRVTS----VGPHEI 245

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
           +   I                NHP   +     A+ 
Sbjct: 246 DERFIAL-------------VNHPR-MAPHLHMALQ 267


>gi|237737408|ref|ZP_04567889.1| molybdenum cofactor biosynthesis protein A [Fusobacterium
           mortiferum ATCC 9817]
 gi|229421270|gb|EEO36317.1| molybdenum cofactor biosynthesis protein A [Fusobacterium
           mortiferum ATCC 9817]
          Length = 324

 Score = 43.2 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 72/166 (43%), Gaps = 26/166 (15%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C++C   +++V   K  +LS ++    +  I     I ++  TGG+PL+ 
Sbjct: 14  LSITDRCNLRCKYCMGDKDIVFLPKDELLSVEEIGRVIK-IFSDLGIKKIRITGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP- 216
             +  + +++T+  I+ ++ +   +        R++ EL + LK+      + I  +   
Sbjct: 72  -RRNFRDIVETINNIEDIEEINITTNGI-----RLSEEL-EFLKDKKIH-SLNISLDTLK 123

Query: 217 ----YEFS--EEAIAAISRLANAGIIL------LSQSVLLKGINDD 250
                E +   +    +  L  A I L      L+  VL++G ND 
Sbjct: 124 KDLFKEITGGGDLDKVLFSLHRA-IELKFKRIKLN-VVLVRGKNDS 167


>gi|237730471|ref|ZP_04560952.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2]
 gi|226906010|gb|EEH91928.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2]
          Length = 445

 Score = 43.2 bits (101), Expect = 0.069,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 19/146 (13%)

Query: 57  ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC--FR 114
            R  IP  +EL     +      +  + P          R++   +  C  +C FC  ++
Sbjct: 30  WRGAIPVAKELLSQTWQ------EVINQPTPP-----RKRLVYLHIPFCATHCTFCGFYQ 78

Query: 115 REMVGSQKGTVLSS--KDTE-AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
                       ++  ++ E  A + + + + I  V F GG P  LS + L +++  LR 
Sbjct: 79  NRFEEDNCALYTNALLREIEMEADSALHQSAPIHAVYFGGGTPSALSAQDLARIITALRD 138

Query: 172 ---IKHVQILRFHSRVPIVDPQRINP 194
              +     +    RV   D  RI+ 
Sbjct: 139 KLPLAPDCEITIEGRVLNFDDARIDA 164


>gi|303245617|ref|ZP_07331900.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio fructosovorans
           JJ]
 gi|302492880|gb|EFL52745.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio fructosovorans
           JJ]
          Length = 432

 Score = 42.8 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 67/179 (37%), Gaps = 19/179 (10%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMV 118
              EL+++P      +G +  +P        P    LK+   C   CR+C     R ++ 
Sbjct: 105 LPTELDLIPGRLATALGADADAPAGRRSSTPPSYAYLKIAEGCDHACRYCTIPAIRGKLA 164

Query: 119 GSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
                 +++      +     +   +Q  +V   G D  +   + L+ +L+ L  +  + 
Sbjct: 165 SRPIDGLITEAKGLIDQGARELVLVAQ--DVTAYGRDLGM--KEGLKALLEKLLPLPGLS 220

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISRLANA 233
            LR       + P  +   L+  L  AG+P   Y  I   H      E +AA++R   A
Sbjct: 221 WLRL----LYLYPSGVTESLLSFLAGAGRPFVPYFDIPFQH---VHPEMLAAMARPKAA 272


>gi|121534710|ref|ZP_01666531.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
 gi|121306730|gb|EAX47651.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
          Length = 327

 Score = 42.8 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 83/214 (38%), Gaps = 32/214 (14%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
               C + C  C+R    G+++   L++ + +  L  I + +    +I +GG+PL+    
Sbjct: 7   TTQACNINCLHCYRDA--GAKRADELTTAEGKKLLGEIAK-AGFKIMILSGGEPLLRPD- 62

Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVY-IAI------ 211
            + ++++  R +     LR    +   ++ P     E+ + LK+AG  V  I+I      
Sbjct: 63  -IYELIRHARAVG----LRPVIGTNGTLIAP-----EVAKKLKDAGLAVAGISIDSLDRS 112

Query: 212 HANHPYEFSEE---AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           H +H    S      +  I     AG+     + +      +   +  +    VEL    
Sbjct: 113 HHDHFRGCSGAWEQTLRGIEACRQAGLPFQIHTTVTSW---NEHEILAITDKAVELGAIA 169

Query: 269 YYLHHPDLA-AGTSHFRLTIEEGQKIVASLKEKI 301
           +++        G      T++  Q    +L E+I
Sbjct: 170 HHIFFLVPTGRGKDIEDTTLKTAQ--YEALLERI 201


>gi|86152771|ref|ZP_01070976.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|121612428|ref|YP_001000685.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|167005607|ref|ZP_02271365.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|85843656|gb|EAQ60866.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           HB93-13]
 gi|87249241|gb|EAQ72202.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 416

 Score = 42.8 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 18/132 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     +  +L   +   A  Y        E++ 
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184

Query: 150 TGGD--PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +     L +   L K+L+ +  I  ++ +R  S    ++P +++   ++ L EA   
Sbjct: 185 TGTNIGSYGLKNGTSLGKLLQKMGQISGIKRIRLGS----LEPAQLDESFLEILDEAWLE 240

Query: 207 VYIAIHANHPYE 218
            ++ I   H  E
Sbjct: 241 RHLHIALQHTSE 252


>gi|329725446|gb|EGG61929.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU144]
          Length = 448

 Score = 42.8 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +    K  E A   +   S   E++ TG  
Sbjct: 142 RTRDSLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   L +  L ++L+ L  I+ ++ +R  S    ++  ++  E+I  +  + K 
Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 250

Query: 207 VYIAIHA 213
           V   +H 
Sbjct: 251 VVRHLHI 257


>gi|322807272|emb|CBZ04846.1| miab family protein, possibly involved in tRNA or rRNAmodification
           [Clostridium botulinum H04402 065]
          Length = 432

 Score = 42.8 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 21/133 (15%)

Query: 90  VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIW 145
           +  Y D  R  LK+   C  +C +C    ++   +G V S K  E  +  ++   K    
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKK-PEKIMEEVKKLSKHGFK 189

Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           E+I +G D             L  +L+ +  ++ ++ +R  S    +DP     E I  +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245

Query: 201 KEAGKPVYIAIHA 213
            +  +      H 
Sbjct: 246 SKLKR---FCPHF 255


>gi|168179386|ref|ZP_02614050.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
           2916]
 gi|182669715|gb|EDT81691.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
           2916]
          Length = 432

 Score = 42.8 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 21/133 (15%)

Query: 90  VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIW 145
           +  Y D  R  LK+   C  +C +C    ++   +G V S K  E  +  ++   K    
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKK-PEKIMEEVKKLSKHGFK 189

Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           E+I +G D             L  +L+ +  ++ ++ +R  S    +DP     E I  +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245

Query: 201 KEAGKPVYIAIHA 213
            +  +      H 
Sbjct: 246 SKLKR---FCPHF 255


>gi|15669097|ref|NP_247902.1| chondro-6-sulfatase regulatory protein [Methanocaldococcus
           jannaschii DSM 2661]
 gi|3334424|sp|Q58317|Y907_METJA RecName: Full=Uncharacterized protein MJ0907
 gi|1591581|gb|AAB98909.1| chondro-6-sulfatase regulatory protein isolog [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 286

 Score = 42.8 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 10/82 (12%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           + G+ H     ++LK+ + C + C +C+             +      A+ Y+       
Sbjct: 2   VDGMKH-----LILKVTNRCNLNCIYCYANNKNNKDMDFKTAK----NAIDYLLNLDNQI 52

Query: 146 EVIFTGGDPLILSHKRLQKVLK 167
           ++ FTGG+PL L+   ++K++ 
Sbjct: 53  KIQFTGGEPL-LNFNLIEKIVD 73


>gi|167586605|ref|ZP_02378993.1| molybdenum cofactor biosynthesis protein A [Burkholderia ubonensis
           Bu]
          Length = 370

 Score = 42.8 bits (100), Expect = 0.073,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 13/101 (12%)

Query: 81  NNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDT 131
             H+P  G++H    R L    + +   C   C +C     F ++        +L+ ++ 
Sbjct: 20  AAHTP-DGLLHDTLARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTLEEI 78

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           E           + ++  TGG+PL+   K L+ +++ L  +
Sbjct: 79  ERIARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116


>gi|326791250|ref|YP_004309071.1| ribosomal protein S12 methylthiotransferase rimO [Clostridium
           lentocellum DSM 5427]
 gi|326542014|gb|ADZ83873.1| Ribosomal protein S12 methylthiotransferase rimO [Clostridium
           lentocellum DSM 5427]
          Length = 448

 Score = 42.8 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 24/159 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--- 153
             +K+   C  +C +C   ++ G  +   +     +A +  +     + E+I    D   
Sbjct: 150 AYVKISEGCDKHCTYCIIPKLRGKYRSRQMDK--IKAEVEKLAAD-GVSEIILVAQDTTE 206

Query: 154 -PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
               L +  L K+L  L  I+ ++ +R    V    P+ I  ELI+ +K   K   Y+ I
Sbjct: 207 YGRDLENASLAKLLHELGEIEGIEWIR----VLYCYPESITDELIEEIKTNPKVCKYLDI 262

Query: 212 HANHP-----YEFS-----EEAIAAISRLANA--GIILL 238
              H         +     E+    + +L     GI L 
Sbjct: 263 PIQHASTAILKRMARKSSLEQLKERLGKLRQEIPGIALR 301


>gi|315645963|ref|ZP_07899084.1| RNA modification enzyme, MiaB family protein [Paenibacillus vortex
           V453]
 gi|315278724|gb|EFU42038.1| RNA modification enzyme, MiaB family protein [Paenibacillus vortex
           V453]
          Length = 447

 Score = 42.8 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 16/126 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  +     S   + A   +       E++ TG  
Sbjct: 142 RTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDPKSI-IQQAHQLVGA--GYKEIVLTGIH 198

Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
               GD   L   RL  +L  L  +  ++ +R  S    ++  +I+ +++  L  + K +
Sbjct: 199 TGGYGD--DLEEYRLSDLLWDLDRVDGLERIRISS----IEASQIDEKMLDVLNRSTK-M 251

Query: 208 YIAIHA 213
              +H 
Sbjct: 252 CRHLHI 257


>gi|321314705|ref|YP_004206992.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5]
 gi|291483457|dbj|BAI84532.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. natto
           BEST195]
 gi|320020979|gb|ADV95965.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5]
          Length = 501

 Score = 42.8 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 15/161 (9%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
           I D   + +  +     +  +   +  CP  C +C         +   + S         
Sbjct: 153 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 212

Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
           +    +++E   ++  + F GG P  ++ + +  + + + R    V+ +R  + V    P
Sbjct: 213 QKIGEWLKEHDVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREIT-VEAGRP 271

Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
             I  E +  L +     + I      P  +  E + AI R
Sbjct: 272 DTITEEKLAVLNKYDIDRISIN-----PQSYENETLKAIGR 307


>gi|154505306|ref|ZP_02042044.1| hypothetical protein RUMGNA_02820 [Ruminococcus gnavus ATCC 29149]
 gi|153794349|gb|EDN76769.1| hypothetical protein RUMGNA_02820 [Ruminococcus gnavus ATCC 29149]
          Length = 440

 Score = 42.8 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 21/151 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             LK+   C  +C +C   ++ G+ +   +  +   +   Y+ E+     ++      L 
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFR--SVPMEQLLSEAEYLAEQGVKELILVAQETTLY 203

Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
                  K L K+L+ L  I  ++ +R         P+ I  ELIQ +KE  K   Y+ +
Sbjct: 204 GKDLYGEKSLHKLLRELCKISGIRWIRI----LYCYPEEIYDELIQTIKEEPKICHYLDL 259

Query: 212 HANHPY-EF---------SEEAIAAISRLAN 232
              H   E           +E I  IS+L  
Sbjct: 260 PIQHANDEILKRMGRRTTKQELIDIISKLRR 290


>gi|225175074|ref|ZP_03729070.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT
           1]
 gi|225169250|gb|EEG78048.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT
           1]
          Length = 431

 Score = 42.8 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 19/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C +C    +  ++        +  AA A    +    E++ +   
Sbjct: 140 RTRAFLKVQEGCRQFCSYCI---VPYARGPLHSRPPEDAAAEAERLAEQGFSEMVLSGVH 196

Query: 151 ----GGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D   L  +  L  +++ L  I+ ++ +R  S    ++P  I P+LI+ L +  K
Sbjct: 197 LGSYGED---LPGELALSDLIRELVTIEKIRRIRISS----IEPTEITPDLIEVLLDYPK 249

Query: 206 PVYIAIHA 213
            V   +H 
Sbjct: 250 -VCRHLHI 256


>gi|225389119|ref|ZP_03758843.1| hypothetical protein CLOSTASPAR_02865 [Clostridium asparagiforme
           DSM 15981]
 gi|225044818|gb|EEG55064.1| hypothetical protein CLOSTASPAR_02865 [Clostridium asparagiforme
           DSM 15981]
          Length = 378

 Score = 42.8 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 58/130 (44%), Gaps = 15/130 (11%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +  +YP +  + ++  C  +C +C    + G ++      ++    +  +     + E++
Sbjct: 191 VERKYPFKSGVNIIFGCNNFCSYCIVPYVRGRERSRRP--EEILKEVKRLAAD-GVVEIM 247

Query: 149 FTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
             G + +    K L++      +L+ +  I  ++ +RF +      P+ ++ ELI+ + +
Sbjct: 248 LLGQN-VNSYGKNLEEPMTFAQLLREVEKIDGIERIRFMTSH----PKDLSDELIEVMSQ 302

Query: 203 AGKPVYIAIH 212
           + K +   +H
Sbjct: 303 S-KKICRHLH 311


>gi|196015044|ref|XP_002117380.1| hypothetical protein TRIADDRAFT_61388 [Trichoplax adhaerens]
 gi|190580133|gb|EDV20219.1| hypothetical protein TRIADDRAFT_61388 [Trichoplax adhaerens]
          Length = 590

 Score = 42.8 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 16/114 (14%)

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGT 124
           E+    E   D  G            R  D + + L   C + C++C   E VG + +  
Sbjct: 40  EVKPFSEFLTDSFG------------RKHDYLRISLTERCNLRCQYCMPSEGVGLTPQER 87

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           +L++ +    L+ +     + ++  TGG+PL+     L  +++ +  I  + ++
Sbjct: 88  LLTADEIIK-LSQLFASEGVTKIRLTGGEPLVRRD--LIDIVREINLIPGIDVI 138


>gi|296242016|ref|YP_003649503.1| radical SAM domain-containing protein [Thermosphaera aggregans DSM
           11486]
 gi|296094600|gb|ADG90551.1| Radical SAM domain protein [Thermosphaera aggregans DSM 11486]
          Length = 305

 Score = 42.8 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 64/186 (34%), Gaps = 33/186 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           L     C  +C +C+    +G +  T  S+  +  +  LA +++ S I   + T  DP  
Sbjct: 32  LHPYTGCSHFCLYCYATSYIGRKPSTPKSNFLESLKTDLAKVEKGSIIE--LSTSSDPY- 88

Query: 157 LSHKRLQKVL-----KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
                +++ +       L    H        ++ I    RI    +  L ++     + I
Sbjct: 89  ---PPIEEWVGLTRNTLLLLRDH------GMKILITTKSRIVERDVDILSKS--HAAVMI 137

Query: 212 HANH-----PYEFSEEAI------AAISRLANAGIILLSQS-VLLKGINDDPEILANLMR 259
                           A         I  L + G+ +  +   ++ G+NDDP  L  L+ 
Sbjct: 138 TITTLDREVSRRLEPGAASPEDRLRTIQYLKDHGVPVGVRIDPVIPGVNDDPLELKELVD 197

Query: 260 TFVELR 265
             V+  
Sbjct: 198 AVVDAG 203


>gi|225017551|ref|ZP_03706743.1| hypothetical protein CLOSTMETH_01478 [Clostridium methylpentosum
           DSM 5476]
 gi|224949701|gb|EEG30910.1| hypothetical protein CLOSTMETH_01478 [Clostridium methylpentosum
           DSM 5476]
          Length = 441

 Score = 42.8 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 60/168 (35%), Gaps = 27/168 (16%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             LK+   C   C +C    + G  +   L  +D      ++   S + E+I    D   
Sbjct: 147 AYLKIAEGCDNNCTYCAIPAIRGPYRSRKL--EDIVEEAEWLAS-SGVKELIVVAQDTTR 203

Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
                    +L ++L+ L  I     +R    V    P+ +  EL+  L E  K   YI 
Sbjct: 204 YGSDLYGELKLPELLRRLCQIDGFVWIR----VLYCYPEMVTDELLDVLAEEPKMAKYID 259

Query: 211 I---HAN-------HPYEFSEEAIAAISRLANA--GIILLSQSVLLKG 246
           I   H N       H     EE ++ + R+      I L   + L+ G
Sbjct: 260 IPIQHINSAVLRRMHRRSTREEILSVVQRVRERVPNITLR--TTLIAG 305


>gi|91773394|ref|YP_566086.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM
           6242]
 gi|91712409|gb|ABE52336.1| Radical SAM family protein [Methanococcoides burtonii DSM 6242]
          Length = 403

 Score = 42.8 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 26/146 (17%)

Query: 92  RY-PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVI 148
           +Y P+ +  ++   C   C  C    M G +     +   K  + AL           + 
Sbjct: 100 KYVPETVSFEITRNCNCNCEHCI---MSGGEGDLDTATIKKAIDEALD-----MGAVVIT 151

Query: 149 FTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           FT GDPL+      L + +   + I  V I    + +         PE+ Q LK+ G   
Sbjct: 152 FTEGDPLLREDIFELIEYVDKDKAI--VNIYTPGTEM--------TPEVAQKLKDTGLHN 201

Query: 208 YIAIHANHPYEFSEEAIAAISRLANA 233
            +    +       E   ++ +L  A
Sbjct: 202 LLVSIYSTV----PEEHDSVRKLKGA 223


>gi|15894987|ref|NP_348336.1| Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824]
 gi|15024675|gb|AAK79676.1|AE007680_9 Fe-S oxidoreductase, related to NifB/MoaA family with PDZ
           N-terminal domain [Clostridium acetobutylicum ATCC 824]
 gi|325509124|gb|ADZ20760.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018]
          Length = 437

 Score = 42.8 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 63/167 (37%), Gaps = 37/167 (22%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           +L     C   C FCF  ++    + T+    D ++ L+++Q       V  T      +
Sbjct: 80  ILDSAKSCRNKCIFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FVTLT-----NM 129

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
           S   + +++K    I  + I      V   +P+         L++               
Sbjct: 130 SDDDIDRIIK--YRISPINI-----SVQTTNPE---------LRKKMLN----------N 163

Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
           +F+   +  + +L+NAGI +  Q VL  GIN   E  +  +    +L
Sbjct: 164 KFAGNLMERMKKLSNAGITMNCQVVLCPGIN-SGEEFSKTVNDLYKL 209


>gi|16079597|ref|NP_390421.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221310468|ref|ZP_03592315.1| hypothetical protein Bsubs1_13906 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221314791|ref|ZP_03596596.1| hypothetical protein BsubsN3_13822 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221319714|ref|ZP_03601008.1| hypothetical protein BsubsJ_13743 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221323991|ref|ZP_03605285.1| hypothetical protein BsubsS_13877 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|1730990|sp|P54462|YQEV_BACSU RecName: Full=Putative methylthiotransferase yqeV
 gi|1303812|dbj|BAA12468.1| YqeV [Bacillus subtilis]
 gi|1890061|dbj|BAA12080.1| YqeV [Bacillus subtilis]
 gi|2634989|emb|CAB14485.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|291484990|dbj|BAI86065.1| hypothetical protein BSNT_03787 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 451

 Score = 42.8 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     +L S+D E  +   Q+   +   E++ T 
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196

Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   +      K+L  L   ++ V+ +R  S    ++  +I  E+I+ L  +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLSELDTRVEGVKRIRISS----IEASQITDEVIEVLDRS 249

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 250 DK-IVNHLHI 258


>gi|119718600|ref|YP_925565.1| radical SAM domain-containing protein [Nocardioides sp. JS614]
 gi|119539261|gb|ABL83878.1| Radical SAM domain protein [Nocardioides sp. JS614]
          Length = 381

 Score = 42.8 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 27/135 (20%)

Query: 81  NNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
            +   ++ + H   DR L+    +   C + CR C R +         L+++  +A L  
Sbjct: 7   ADQRAVRQLHHDPGDRPLITIWEVTRACALVCRHC-RADAQTRADPRQLTTEQGKALLDD 65

Query: 138 IQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-------PIVDP 189
           I    + +  V+ TGGDP       L ++            +R+ + +       P V P
Sbjct: 66  IAGFGKPYPIVVLTGGDPFERPD--LAEL------------VRYGTALGLHVALSPSVTP 111

Query: 190 QRINPELIQCLKEAG 204
            R+ P+++  L+ AG
Sbjct: 112 -RLTPDVLAELRAAG 125


>gi|296333299|ref|ZP_06875752.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305675196|ref|YP_003866868.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296149497|gb|EFG90393.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           subsp. spizizenii ATCC 6633]
 gi|305413440|gb|ADM38559.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           subsp. spizizenii str. W23]
          Length = 451

 Score = 42.8 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     +L S+D E  +   Q+   +   E++ T 
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196

Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   +      K+L  L   ++ V+ +R  S    ++  +I  E+I+ L  +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLSELDTRVEGVKRIRISS----IEASQITDEVIEVLDRS 249

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 250 DK-IVNHLHI 258


>gi|187477325|ref|YP_785349.1| molybdenum cofactor biosynthesis protein A [Bordetella avium 197N]
 gi|115421911|emb|CAJ48431.1| molybdenum cofactor biosynthesis protein A [Bordetella avium 197N]
          Length = 360

 Score = 42.8 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 60/254 (23%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDT 131
           P+ D    PL+ +         + +   C   C +C  R++  +         +LS ++ 
Sbjct: 24  PLRDQRGRPLRDLR--------ISVTDRCNFRCTYCMPRDVFDASYRFMPHSALLSFEEI 75

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
             A           ++  TGG+PL+     + K++  L  +          R P   P  
Sbjct: 76  TRAARVFTRLGT-EKIRLTGGEPLLRKD--VDKLIAMLADL----------RTPQGLPLD 122

Query: 192 IN----PELIQC----LKEAGK-PVYIAIHANHPYEF--------SE-EAIAAISRLANA 233
           +       L+      LK AG   V +++ A  P  F        +  + +  I   A A
Sbjct: 123 LTLTTNASLLARKASALKAAGLGRVTVSLDALDPGRFKQLADADYTPSDVLRGIDAAAAA 182

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           G+ +    V+ +G+NDD   +  L R F          H         +  +    G  +
Sbjct: 183 GLPVKVNMVVRRGVNDD--QILPLARHFRHSG------HVLRFI---EYMDVGNSNGWNL 231

Query: 294 VA-----SLKEKIS 302
                   L  ++S
Sbjct: 232 AEVLPSAELIARLS 245


>gi|16081159|ref|NP_388865.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221308821|ref|ZP_03590668.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221313144|ref|ZP_03594949.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. NCIB 3610]
 gi|221318068|ref|ZP_03599362.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. JH642]
 gi|221322343|ref|ZP_03603637.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. SMY]
 gi|59799598|sp|Q796V8|HEMZ_BACSU RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase 2;
           Short=Coprogen oxidase; Short=Coproporphyrinogenase
 gi|32468726|emb|CAB12823.2| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis
           str. 168]
          Length = 501

 Score = 42.8 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 15/161 (9%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
           I D   + +  +     +  +   +  CP  C +C         +   + S         
Sbjct: 153 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 212

Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
           +    +++E   ++  + F GG P  ++ + +  + + + R    V+ +R  + V    P
Sbjct: 213 QKIGEWLKEHDVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREIT-VEAGRP 271

Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
             I  E +  L +     + I      P  +  E + AI R
Sbjct: 272 DTITEEKLAVLNKYDIDRISIN-----PQSYENETLKAIGR 307


>gi|228987980|ref|ZP_04148086.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228771784|gb|EEM20244.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 339

 Score = 42.8 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177


>gi|222098198|ref|YP_002532255.1| molybdenum cofactor biosynthesis protein a [Bacillus cereus Q1]
 gi|221242256|gb|ACM14966.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus Q1]
          Length = 334

 Score = 42.8 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 15  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 73

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 74  PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 125

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 126 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 172


>gi|206977358|ref|ZP_03238255.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           H3081.97]
 gi|217962214|ref|YP_002340784.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
 gi|206744509|gb|EDZ55919.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus
           H3081.97]
 gi|217067222|gb|ACJ81472.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187]
          Length = 337

 Score = 42.8 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175


>gi|23099419|ref|NP_692885.1| hypothetical protein OB1964 [Oceanobacillus iheyensis HTE831]
 gi|22777648|dbj|BAC13920.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 450

 Score = 42.8 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 18/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  + +       E A   ++      E++ TG  
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWSRGLLR-SRDPKNVIEQATKLVKA--GYKELVLTGIH 198

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D   +       +L+ L  ++ ++ +R  S    ++  +I  E+I  + ++ K 
Sbjct: 199 TAGYGED---MKDYNFAMLLRELEEVEGLERIRISS----IEASQITDEVIDVIDQSNK- 250

Query: 207 VYIAIHA 213
           +   +H 
Sbjct: 251 IVRHLHV 257


>gi|47565151|ref|ZP_00236194.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus
           G9241]
 gi|47557937|gb|EAL16262.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus
           G9241]
          Length = 337

 Score = 42.8 bits (100), Expect = 0.078,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 77  PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175


>gi|260173948|ref|ZP_05760360.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. D2]
 gi|315922216|ref|ZP_07918456.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. D2]
 gi|313696091|gb|EFS32926.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. D2]
          Length = 152

 Score = 42.8 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            C  +C  C   E      G  L+ +  ++ +  I+    +  V F+GGDP     + L
Sbjct: 25  GCSHHCLGCHNPESWNPGAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEEFL 83


>gi|257460123|ref|ZP_05625227.1| radical SAM domain protein [Campylobacter gracilis RM3268]
 gi|257442564|gb|EEV17703.1| radical SAM domain protein [Campylobacter gracilis RM3268]
          Length = 275

 Score = 42.8 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 64/184 (34%), Gaps = 36/184 (19%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQE----KSQIWEVI 148
            R+ L +   C + C FC R     ++    ++ +    + A  Y++     +  I  + 
Sbjct: 24  GRVHLPVAPNCNIQCNFCNRIYDCANENRPGVTGRVQSPDEAALYVENLFKFRQDISVIG 83

Query: 149 FTG-GDPLILSHKRLQKV---------------LKTLRYIKHV-QILRFHSRVPIVDPQR 191
             G GDP+  + K L                     L   +HV  I+R       V    
Sbjct: 84  IAGPGDPMCDADKTLATFEKCKARFPHALLCLSTNGLSLPEHVDDIVRIGVSHVTVTVNA 143

Query: 192 INPELIQCLKEAGKPVYIAIHAN---HPYE----FSEEAIAAISRLANAGIILLSQSVLL 244
           + P++       GK      H N   H  E      E     I +L  A +I+   +V++
Sbjct: 144 VTPDV------GGKIYAWVRHKNKIYHGEEGARILGERQEEGIRKLKEARMIVKINTVVI 197

Query: 245 KGIN 248
            G+N
Sbjct: 198 PGVN 201


>gi|138894331|ref|YP_001124784.1| molybdenum cofactor biosynthesis protein A [Geobacillus
           thermodenitrificans NG80-2]
 gi|196248059|ref|ZP_03146761.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
           G11MC16]
 gi|134265844|gb|ABO66039.1| Molybdenum cofactor biosynthesis protein A [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212843|gb|EDY07600.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp.
           G11MC16]
          Length = 341

 Score = 42.8 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 63/174 (36%), Gaps = 38/174 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           L ++  C   C +C   E+ G       +G +L+ ++  A L+    +  + ++  TGG+
Sbjct: 22  LSVIDQCNFRCIYCMPAEVFGPNFRFLAEGELLTVEEM-ALLSECFVELGVEKIRLTGGE 80

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRV--PIVDPQR---------------INPEL 196
           PL+     L  ++  L  I  ++ +   +     +   QR               ++ ++
Sbjct: 81  PLLRRD--LDALVARLSAIPGLRDIGLTTNGVHLVKWAQRLKEAGLKRVNVSLDALDDDI 138

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
            + +   G  V                +  I     AG+ +    V+ KG ND 
Sbjct: 139 FRKMNGIGVGVA-------------PVLKGIEAARAAGLGVKVNMVVKKGWNDS 179


>gi|187778464|ref|ZP_02994937.1| hypothetical protein CLOSPO_02058 [Clostridium sporogenes ATCC
           15579]
 gi|187772089|gb|EDU35891.1| hypothetical protein CLOSPO_02058 [Clostridium sporogenes ATCC
           15579]
          Length = 432

 Score = 42.8 bits (100), Expect = 0.079,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 21/133 (15%)

Query: 90  VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIW 145
           +  Y D  R  LK+   C  +C +C    ++   +G V S K  E  +  ++   K    
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKK-PEKVMEEVRKLSKHGFK 189

Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           E+I +G D             L  +L+ +  ++ ++ +R  S    +DP     E I  +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEDIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245

Query: 201 KEAGKPVYIAIHA 213
            +  K      H 
Sbjct: 246 SKLKK---FCPHF 255


>gi|325829809|ref|ZP_08163267.1| putative heme d1 biosynthesis radical SAM protein NirJ2
           [Eggerthella sp. HGA1]
 gi|325487976|gb|EGC90413.1| putative heme d1 biosynthesis radical SAM protein NirJ2
           [Eggerthella sp. HGA1]
          Length = 334

 Score = 42.8 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 39/215 (18%), Positives = 75/215 (34%), Gaps = 47/215 (21%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C + C  C++           LS ++ +  +  I   +    +IF+GG+PL+
Sbjct: 3   VSWMTTNKCNLKCVHCYQDAE--EATDKELSCEEGKKMIDEIAR-AGFKVMIFSGGEPLM 59

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG--------KP 206
                + +++         + LR     P+       I PE+   LKEAG          
Sbjct: 60  RPD--IYELVAHAAS----RGLR-----PVFGSNGTLITPEVAVRLKEAGACAMGISVDS 108

Query: 207 VYIAIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRT 260
           +    H       H Y+ +   I A      AG+    Q  L   + D + + +  +   
Sbjct: 109 LDAVKHDRFRGLEHAYDLTMAGIEAC---KQAGLPF--Q--LHTTVVDWNRDEVCAITDF 161

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
            VE+    +Y+           F + +  G+ I  
Sbjct: 162 AVEIGAMAHYVF----------FLIPVGRGKFIQE 186


>gi|294793531|ref|ZP_06758668.1| radical SAM domain protein [Veillonella sp. 3_1_44]
 gi|294455101|gb|EFG23473.1| radical SAM domain protein [Veillonella sp. 3_1_44]
          Length = 394

 Score = 42.8 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 30/167 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155
                 CP  C FC +  + G    + L+ +  +  +  Y+  +   + WEV F GG   
Sbjct: 5   FIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWEVAFYGG-SF 63

Query: 156 ILSHKRLQK-VLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
               K LQ  +L     +     +  +R  +R     P  +  E I  L+  G K V + 
Sbjct: 64  TAIIKDLQHKLLMPAYEMLQQGLIDGIRCSTR-----PDAVGDEAITLLQSYGVKTVELG 118

Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           + +            H  +   E + A++RL +  + +  Q  LL G
Sbjct: 119 VQSMNDGILVDAKRGHTAQ---EVVEAVTRLKHRDMTVGVQ--LLPG 160


>gi|118602407|ref|YP_903622.1| radical SAM protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|205829871|sp|A1AW44|RLMN_RUTMC RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|118567346|gb|ABL02151.1| 23S rRNA m(2)A-2503 methyltransferase [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 356

 Score = 42.8 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 66/186 (35%), Gaps = 37/186 (19%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYI-QEKSQIWEVIFTG-GDPLILS- 158
            C + C FC    M G  K    +        A  Y+  +  +I  V+F G G+PL+   
Sbjct: 111 GCGLACTFCS-TGMQGFNKNLTTAEIIAQVLIASRYLNSKTKRISNVVFMGMGEPLLNEH 169

Query: 159 ------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
                    L  +   L      + +   +   +       P +++  +     + +++H
Sbjct: 170 AVYNACDLLLDDLAFGLSR----RKVTISTSGVV-------PAMLRMSERTPVSLAVSLH 218

Query: 213 AN--HPY-EFSE--------EAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLM 258
           A+  H   E           E + A      AG     +L + V+LKG+ND  E    L+
Sbjct: 219 ASDDHLRNELVPINQKYSLEELLKACKVYLQAGTQKRHILFEYVMLKGVNDSIEHANKLV 278

Query: 259 RTFVEL 264
           +    +
Sbjct: 279 KLLKGI 284


>gi|54024605|ref|YP_118847.1| hypothetical protein nfa26360 [Nocardia farcinica IFM 10152]
 gi|54016113|dbj|BAD57483.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 526

 Score = 42.8 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 27/204 (13%)

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           P K  L   P    DP+       L  +  ++   +L  +L  C + C  CF       +
Sbjct: 87  PTKAHLPDTPG-NFDPVPAAYLRGLPEMQTQHTCILLADILAGCNLRCPTCF--ADSTPE 143

Query: 122 KGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
              V++  D  A +     +E  ++  ++ +GG+P +     L  +L  L     +  + 
Sbjct: 144 LAGVVAVADVLANVDQRLAREHGRLDVLMLSGGEPTLHPD--LPTLLAELTARP-ITRIL 200

Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHAN--------HPY--EFSEEAIAAI 227
            ++        R+  +  L+  L E  + V + +  +        H    +       A+
Sbjct: 201 INTNGV-----RLARDESLVALLAEHRERVEVYLQYDGVSAAASRHHRGGDLRALKAEAL 255

Query: 228 SRLANAGI-ILLSQSVLLKGINDD 250
            RL+  GI   L  +V L G+NDD
Sbjct: 256 RRLSGHGIFTTLVMTVAL-GVNDD 278


>gi|6685644|sp|O27593|MOAA_METTH RecName: Full=Probable molybdenum cofactor biosynthesis protein A
          Length = 305

 Score = 42.8 bits (100), Expect = 0.080,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 30/164 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C V C +C R  M  S+    LS+ D E     +     + ++  +GG+PLI  
Sbjct: 16  LSITGRCNVNCIYCHRDGMTSSRGE--LSAADIEKLCR-VASDLGVGKIRLSGGEPLIRD 72

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
              + ++++ +  I   + +   +         +       L EAG    + +  +    
Sbjct: 73  D--IVEIVERINNIG-FRDISITTNG------TLLEGYSAALSEAGLD-RVNVSFDT--- 119

Query: 219 FSEEAIAAISR-----LANAGI---------ILLSQSVLLKGIN 248
            + E    I+R        +GI          +    V+L+G+N
Sbjct: 120 LNPETYRFITRKDYLERVKSGITSAVDVGLDPVKINMVILRGVN 163


>gi|295106858|emb|CBL04401.1| Predicted Fe-S oxidoreductases [Gordonibacter pamelaeae 7-10-1-b]
          Length = 335

 Score = 42.8 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 40/215 (18%), Positives = 74/215 (34%), Gaps = 47/215 (21%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C + C  C++           LS+ +    +  I   +    +IF+GG+PL+
Sbjct: 3   VSWMTTNKCNLKCVHCYQDAE--EASALELSTDEGRKMIDEIAR-AGFKVMIFSGGEPLM 59

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG--------KP 206
                + +++         + LR     P+       I PE    LKEAG          
Sbjct: 60  RPD--IYELVAHAAS----RGLR-----PVFGSNGTLITPEAAARLKEAGACAMGISVDS 108

Query: 207 VYIAIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRT 260
           +  A H       H Y+ +   I A      AG+    Q  L   + D + + +  +   
Sbjct: 109 LDAAKHDKFRGLEHAYDLTMAGIEAC---KQAGLPF--Q--LHTTVVDWNRDEVCAITDF 161

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
            VE+    +Y+           F + +  G+ I  
Sbjct: 162 AVEIGAMAHYVF----------FLIPVGRGKFIQE 186


>gi|262196535|ref|YP_003267744.1| molybdenum cofactor biosynthesis protein A [Haliangium ochraceum
           DSM 14365]
 gi|262079882|gb|ACY15851.1| molybdenum cofactor biosynthesis protein A [Haliangium ochraceum
           DSM 14365]
          Length = 346

 Score = 42.8 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 77/212 (36%), Gaps = 21/212 (9%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C   C +C     MV   +  +LS ++ E  +        +  +  TGG+P  +
Sbjct: 25  VSLTDRCNFRCTYCMPATGMVFRARKELLSFEELERLIGVFAS-VGVRRIRLTGGEP-TV 82

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
             + +  ++  +  +  +        V +     + PEL Q L EAG   V I++    P
Sbjct: 83  RAEVVS-LVGRIARVPGID------EVVMTSNGHLFPELAQPLAEAGLAGVNISLDTLDP 135

Query: 217 YEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
             F             A I     AG+ +   +V LKG ND    +  L        I P
Sbjct: 136 ERFRALTRRGDLARVLAGIDAARAAGLEVKINAVALKGEND--AEVPALCAYAWGRGITP 193

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            ++ H  ++ G  +         +I A++   
Sbjct: 194 RFIEHMPMSEGQLYSETRQLTAAEIRAAVSAH 225


>gi|154500609|ref|ZP_02038647.1| hypothetical protein BACCAP_04282 [Bacteroides capillosus ATCC
           29799]
 gi|150270498|gb|EDM97807.1| hypothetical protein BACCAP_04282 [Bacteroides capillosus ATCC
           29799]
          Length = 253

 Score = 42.8 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 69/193 (35%), Gaps = 25/193 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P    +     CP+ C +C   +  G++ GT ++  +  AA    +   +   +  TGG+
Sbjct: 21  PGIRFVVFFQGCPMRCLYCHNPDTWGTEGGTEMTVDELLAAYQRNKGFYRQGGITATGGE 80

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH----SRVPIVDPQRINPELIQCLKEAGKPVYI 209
           PL L    L ++    +          H    +   +  P     E           +  
Sbjct: 81  PL-LQLPFLTELFTAAKEQG------IHTCLDTSGIVYRPDHRQGEFDALFAVTDLVLLD 133

Query: 210 AIHAN---HPYEFSEE----AIAAISRLANAGIILLSQSVLLKGINDDPEILANL----- 257
             HA+   H  + + +     +A    L  A + ++ + V++ G+ D P+ L  L     
Sbjct: 134 IKHADPQGH-RQLTGQDQSPVLAFARALEQAKVPIIVRHVVVPGLTDSPQELTALGRLIA 192

Query: 258 -MRTFVELRIKPY 269
             R    L + PY
Sbjct: 193 PFRNLKGLEVLPY 205


>gi|299148082|ref|ZP_07041145.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 3_1_23]
 gi|298514265|gb|EFI38151.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 3_1_23]
          Length = 152

 Score = 42.8 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            C  +C  C   E      G  L+ +  ++ +  I+    +  V F+GGDP     + L
Sbjct: 25  GCSHHCPGCHNPESWNPGAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEEFL 83


>gi|227504771|ref|ZP_03934820.1| radical SAM domain protein [Corynebacterium striatum ATCC 6940]
 gi|227198621|gb|EEI78669.1| radical SAM domain protein [Corynebacterium striatum ATCC 6940]
          Length = 394

 Score = 42.8 bits (100), Expect = 0.081,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 24/120 (20%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTG 151
            P   + ++   C + C+ C R +         L+++  +A L  I    +    V+ TG
Sbjct: 17  KPFIAIWEVTRACQLVCQHC-RADAQHEPAPGQLTTEQGKALLDSIASYDKPRPIVVLTG 75

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-------PIVDPQRINPELIQCLKEAG 204
           GDP       L+++ +            + + +       P V P R+  E ++ L+ AG
Sbjct: 76  GDPFERGD--LEELTE------------YGTSLGLNVSLSPSVTP-RLTRERLEGLRAAG 120


>gi|313159153|gb|EFR58528.1| menaquinone biosynthesis protein, SCO4494 family [Alistipes sp.
           HGB5]
          Length = 360

 Score = 42.8 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           ++  + C   CRFC  R   GS +    + ++ E  +A  ++   I EV   GG   +  
Sbjct: 58  IEPTNRCVFNCRFCSYRRPAGSPEAWDYTMEEIEQ-IARGRQGKGITEVHIVGG---VHP 113

Query: 159 HKRLQKVLKTLRYIKHV 175
              L+  +  +R +K +
Sbjct: 114 DHGLEYYIDMIRRVKAI 130


>gi|303232268|ref|ZP_07318967.1| MiaB-like protein [Atopobium vaginae PB189-T1-4]
 gi|302481678|gb|EFL44739.1| MiaB-like protein [Atopobium vaginae PB189-T1-4]
          Length = 449

 Score = 42.8 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 17/128 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  +K+   C   C FC   +  G        S D +  ++ ++        EV+ TG
Sbjct: 162 RTRPGIKVQDGCNNRCSFCIVWKARGP-----ACSADVDEIISQVRATQAHGAHEVVLTG 216

Query: 152 ---GDP---LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
              GD       S  RL  +L  +     ++ +R  S    ++P  I  EL+  +  +  
Sbjct: 217 INLGDYRYEYKGSRLRLPGLLSEIMKQTSIERIRLSS----IEPPDITDELLDVIAGSEG 272

Query: 206 PVYIAIHA 213
            +   +H 
Sbjct: 273 RIAQFLHI 280


>gi|282857182|ref|ZP_06266426.1| 23S rRNA m2A2503 methyltransferase [Pyramidobacter piscolens W5455]
 gi|282584968|gb|EFB90292.1| 23S rRNA m2A2503 methyltransferase [Pyramidobacter piscolens W5455]
          Length = 365

 Score = 42.8 bits (100), Expect = 0.082,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 80/224 (35%), Gaps = 48/224 (21%)

Query: 104 VCPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLI 156
            CP+ C FC      F+R +   +  +  ++ +++           I  V+F G G+PL+
Sbjct: 134 GCPLRCEFCATGQQGFKRNLSAGEIVSHFAAMESDVGHD-------INNVVFMGMGEPLL 186

Query: 157 LSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
                ++     L+       V+ +   +           PE I+ L + G  +Y+ +  
Sbjct: 187 NYENVVKAVRMFLEPKMRGLSVRHVTISTSGI--------PEGIRRLADEGLDIYLCLSL 238

Query: 214 NHPY-EFS------------EEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILANL-- 257
           + P  E                  +A+       G+ L  + V+LK +ND P+    L  
Sbjct: 239 HAPNNELRSRIMPVNERFPLGAVFSALEYWQKKTGVRLTIEYVMLKNVNDTPDCAYELAT 298

Query: 258 --MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299
                 V + + PY     +  AGT   R +       +  LK 
Sbjct: 299 LFSNLQVYVNLIPY-----NPVAGTQFARPSASRIAPFMKILKG 337


>gi|311067283|ref|YP_003972206.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
           [Bacillus atrophaeus 1942]
 gi|310867800|gb|ADP31275.1| putative Fe-S oxidoreductase, radical SAM superfamily protein
           [Bacillus atrophaeus 1942]
          Length = 372

 Score = 42.8 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L     +  L  ++E   +  +  TGG+P +
Sbjct: 33  VEFTTTTLCNMRCEHCAVGYTLQPKDPNALP---IDLLLQRLEEIPLLRSISITGGEP-M 88

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +++ +  L    H + +R           +IN  L   ++      P    +H +
Sbjct: 89  LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIERYEWIIPYLDVLHIS 138

Query: 215 H 215
           H
Sbjct: 139 H 139


>gi|303239253|ref|ZP_07325782.1| protein of unknown function DUF512 [Acetivibrio cellulolyticus CD2]
 gi|302593298|gb|EFL63017.1| protein of unknown function DUF512 [Acetivibrio cellulolyticus CD2]
          Length = 434

 Score = 42.8 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 65/164 (39%), Gaps = 40/164 (24%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           ++ ++     C   C FCF  ++    + ++    D ++ L+++Q       V  T    
Sbjct: 77  EKEIMDEARSCRNNCLFCFIDQLPKGMRKSLYFKDD-DSRLSFLQGN----FVTLT---- 127

Query: 155 LILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIH 212
             ++ + + ++++  +  I     +  H+     +P  RI     + LK           
Sbjct: 128 -NMTDEDIDRIIRYRICPI----NISVHT----TNPDLRI-----KMLK----------- 162

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
                 F+ +    + +LA AGI++  Q VL  G N+  E++  
Sbjct: 163 ----NRFAGDVYTRLQKLAAAGIMMNCQIVLCPGYNNGEELIKT 202


>gi|239623740|ref|ZP_04666771.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521771|gb|EEQ61637.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 492

 Score = 42.8 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 65/160 (40%), Gaps = 28/160 (17%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
            K ++ I   E  D I +    P++    +YP +  + ++  C  +C +C    + G ++
Sbjct: 170 HKHKMVIDVWEDTDQIVE--DLPVE---RKYPFKSGVNIMFGCNNFCSYCIVPYVRGRER 224

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----------PLILSHKRLQKVLKTLRYI 172
                 ++    +  +     + EV+  G +          P+         +L+ +  +
Sbjct: 225 SR--KPEEIIKEIRRLASD-GVVEVMLLGQNVNSYGKNLETPMTF-----AGLLREVEKV 276

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
             ++ +RF +      P+ ++ ELI+ +  +GK +   +H
Sbjct: 277 DGIRRIRFMTSH----PKDLSDELIEVMAGSGK-ICRHLH 311


>gi|149199462|ref|ZP_01876497.1| putative Fe-S oxidoreductase [Lentisphaera araneosa HTCC2155]
 gi|149137397|gb|EDM25815.1| putative Fe-S oxidoreductase [Lentisphaera araneosa HTCC2155]
          Length = 437

 Score = 42.8 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 13/124 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  LK+   C   C FC     +         S+D E  L   +        E++ TG
Sbjct: 148 KTRANLKIQDGCDFMCTFC-----IIPMARGRSRSRDMENLLEEARTLIGQGFREIVITG 202

Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
            +        +    V+  L  ++ ++ +R  S  P   P++I       + +    +  
Sbjct: 203 VNVATYDSQGRTFLDVIDRLNELEGIERIRISSIEPTTIPEKI----FDYMADPNHALVP 258

Query: 210 AIHA 213
            +H 
Sbjct: 259 YLHI 262


>gi|310659190|ref|YP_003936911.1| hypothetical protein CLOST_1886 [Clostridium sticklandii DSM 519]
 gi|308825968|emb|CBH22006.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 445

 Score = 42.8 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 58/185 (31%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           ++  +  C   C FCF  ++    + T+    D ++ L+++Q       +  T      +
Sbjct: 87  IIDSVKTCRNKCIFCFIDQLPEGMRETLYFKDD-DSRLSFLQGN----FITMT-----NM 136

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP- 216
             K + K++K                       RI+            PV +++H  +P 
Sbjct: 137 GDKEIDKMIK----------------------YRIS------------PVNVSVHTTNPT 162

Query: 217 -------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVE 263
                    F+ + +  + RL +A I + +Q VL+  +ND  E+      LA+L      
Sbjct: 163 LRAKMLGNRFAGDVLDKMKRLKSADITMNAQIVLVPDVNDKEELDKTINDLASLYPQLNS 222

Query: 264 LRIKP 268
           + I P
Sbjct: 223 VAIVP 227


>gi|134277196|ref|ZP_01763911.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 305]
 gi|134250846|gb|EBA50925.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 305]
          Length = 377

 Score = 42.8 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 21/131 (16%)

Query: 55  PIARQFIPQ-----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           P++R+ IP        +L+  P      + D    PL+ +         + +   C   C
Sbjct: 7   PMSRRIIPVTPVSAAPDLSGAPLTPTGTLRDALARPLRDLR--------ISVTDRCNFRC 58

Query: 110 RFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
            +C  R + G          +L+ ++ E           + ++  TGG+PL+   K L+ 
Sbjct: 59  VYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPLL--RKNLEF 115

Query: 165 VLKTLRYIKHV 175
           +++ L  +  V
Sbjct: 116 LIERLANMTTV 126


>gi|126454258|ref|YP_001067111.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 1106a]
 gi|217420454|ref|ZP_03451959.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 576]
 gi|226197916|ref|ZP_03793490.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei Pakistan 9]
 gi|254259569|ref|ZP_04950623.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 1710a]
 gi|126227900|gb|ABN91440.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 1106a]
 gi|217395866|gb|EEC35883.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 576]
 gi|225930104|gb|EEH26117.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei Pakistan 9]
 gi|254218258|gb|EET07642.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 1710a]
          Length = 377

 Score = 42.8 bits (100), Expect = 0.083,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 21/131 (16%)

Query: 55  PIARQFIPQ-----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           P++R+ IP        +L+  P      + D    PL+ +         + +   C   C
Sbjct: 7   PMSRRIIPVTPVSAAPDLSGAPLTPTGTLRDALARPLRDLR--------ISVTDRCNFRC 58

Query: 110 RFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
            +C  R + G          +L+ ++ E           + ++  TGG+PL+   K L+ 
Sbjct: 59  VYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPLL--RKNLEF 115

Query: 165 VLKTLRYIKHV 175
           +++ L  +  V
Sbjct: 116 LIERLANMTTV 126


>gi|313114194|ref|ZP_07799746.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310623603|gb|EFQ07006.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 487

 Score = 42.8 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 9/118 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C +CF  +        ++S +  + A+ ++ E S      EV F GG+PL
Sbjct: 107 LHVAHTCNLNCSYCFASQGRYQGDRALMSFEVGKRAMDFLIENSGTRRNLEVDFFGGEPL 166

Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           +     K+L    +    I H +  RF       +   I+ ++I    +    V +++
Sbjct: 167 MNFDMVKKLVAYCREQEKI-HNKNFRF---TMTTNGMLIDDDVIDFCNKECHNVVLSL 220


>gi|295100532|emb|CBK98077.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Faecalibacterium
           prausnitzii L2-6]
          Length = 483

 Score = 42.8 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 9/118 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C +CF  +        ++S +  + A+ ++ E S      EV F GG+PL
Sbjct: 103 LHVAHTCNLNCSYCFASQGRYQGDRALMSFEVGKRAMDFLIENSGTRRNLEVDFFGGEPL 162

Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           +     K+L    +    I H +  RF       +   I+ ++I    +    V +++
Sbjct: 163 MNFDMVKKLVAYCREQEKI-HNKNFRF---TMTTNGMLIDDDVIDFCNKECHNVVLSL 216


>gi|291459649|ref|ZP_06599039.1| putative heme biosynthesis protein [Oribacterium sp. oral taxon 078
           str. F0262]
 gi|291417681|gb|EFE91400.1| putative heme biosynthesis protein [Oribacterium sp. oral taxon 078
           str. F0262]
          Length = 432

 Score = 42.8 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           ++ + + + C + C  CF     G  +   L  ++  A +  I+E + + +++ +GG+PL
Sbjct: 108 KVHITMTNNCNMRCPHCFVSA--GIVEKQELKVEEILAVVERIKEINGLTDIVVSGGEPL 165

Query: 156 ILS 158
           I S
Sbjct: 166 IHS 168


>gi|239623774|ref|ZP_04666805.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239521805|gb|EEQ61671.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 448

 Score = 42.8 bits (100), Expect = 0.084,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 58/192 (30%), Gaps = 24/192 (12%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           I +Q +  K   ++        + D     +      Y     LK+   C   C +C   
Sbjct: 111 IVKQVLEGKGITHLTSFHDLGELPDTQAGRVVTTGGYY---AFLKIAEGCDKRCTYCIIP 167

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH----KRLQKVLKTLRY 171
            + G  +   +  +        +        ++      L        K L K+L  L  
Sbjct: 168 YLRGPYR--SVPMEQLLEEARQLASGGVKELILVAQETTLYGKDIYGGKSLPKLLHELAQ 225

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP-YEF---------S 220
           I  +Q +R         P+ I  ELI+ ++   K   Y+ I   H               
Sbjct: 226 IPGIQWIRIQ----YCYPEEITDELIEAIRSEEKVCHYLDIPIQHASNRILKRMGRRTNR 281

Query: 221 EEAIAAISRLAN 232
           EE    I++L  
Sbjct: 282 EELTERIAKLRK 293


>gi|331649321|ref|ZP_08350407.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli M605]
 gi|331041819|gb|EGI13963.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli M605]
          Length = 445

 Score = 42.8 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +        +R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RNRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + +   I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSGPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|301060145|ref|ZP_07201012.1| radical SAM domain protein [delta proteobacterium NaphS2]
 gi|300445657|gb|EFK09555.1| radical SAM domain protein [delta proteobacterium NaphS2]
          Length = 295

 Score = 42.8 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 12/90 (13%)

Query: 97  ILLKLLHVCPVY-CRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           ILL++   C    C FC     +        T+LS  D   A  Y++ + +I       G
Sbjct: 21  ILLQVTLGCSHNKCTFCGTYTDKRFTIKDDKTILS--DILFASKYMKRQDRI---FLMDG 75

Query: 153 DPLILSHKRLQKVLKTLRYIKHV-QILRFH 181
           D LI+  KRL  +L  +R  +H+  I R  
Sbjct: 76  DALIIPQKRLMWILDRIR--EHLPWIKRVG 103


>gi|237813219|ref|YP_002897670.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei MSHR346]
 gi|237506155|gb|ACQ98473.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei MSHR346]
          Length = 377

 Score = 42.8 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 21/131 (16%)

Query: 55  PIARQFIPQ-----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           P++R+ IP        +L+  P      + D    PL+ +         + +   C   C
Sbjct: 7   PMSRRIIPVTPVSAAPDLSGAPLTPTGTLRDALARPLRDLR--------ISVTDRCNFRC 58

Query: 110 RFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
            +C  R + G          +L+ ++ E           + ++  TGG+PL+   K L+ 
Sbjct: 59  VYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPLL--RKNLEF 115

Query: 165 VLKTLRYIKHV 175
           +++ L  +  V
Sbjct: 116 LIERLANMTTV 126


>gi|255691222|ref|ZP_05414897.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides finegoldii DSM 17565]
 gi|260623136|gb|EEX46007.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides finegoldii DSM 17565]
          Length = 163

 Score = 42.8 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            C  +C  C   E    + G  L+ +  ++ +  I+    +  V F+GGDP       L
Sbjct: 35  GCSHHCPGCHNPESWNPEAGERLTEEKIQSIIKEIKANPLLDGVTFSGGDPFYNPEAFL 93


>gi|254521757|ref|ZP_05133812.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas sp.
           SKA14]
 gi|219719348|gb|EED37873.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas sp.
           SKA14]
          Length = 326

 Score = 42.8 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 61/175 (34%), Gaps = 13/175 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L L   C   C +C         +   L   +    +        + ++  TGG+P +  
Sbjct: 17  LSLTEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAA-LGMSKIRLTGGEPSLRK 75

Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHA 213
              L +++ T+  +  ++ +      + +P   P   R     +    ++ +        
Sbjct: 76  D--LDEIIATVAAVPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFRTIT 133

Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDD--PEILANLMRTFVELR 265
            H      E    ++     G+  +   +VLL+G+NDD  P+ +  L      +R
Sbjct: 134 GHDR--LPEIEQGLALAQALGLPAIKLNAVLLRGLNDDELPQWMDYLRDRPFSVR 186


>gi|91203561|emb|CAJ71214.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 331

 Score = 42.8 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 69/187 (36%), Gaps = 32/187 (17%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R+P  ++L++ H+C + C  C R   +     T+         +  I E      V  TG
Sbjct: 25  RFPLVLMLEVTHLCNLACEGCGR---ILEYHDTMREMLSVGECMQAIHECPTP-VVTITG 80

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--GKPVYI 209
           G+PL+     + K++  +  IK  + +   +   +         L+  LK+    K + I
Sbjct: 81  GEPLMHP--EIDKIISGI--IKEKRHVYLCTNGIL---------LVDALKKLKPHKYLNI 127

Query: 210 AIHANHPYE---------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPE-ILANLMR 259
            +H +   E           + A  AI     AG  + + + + K   D  E  +  L  
Sbjct: 128 NVHIDGLAETHDKIAGKGIFDRATNAIREAKKAGFKVCTNTTIFK---DTSEKEIVELFS 184

Query: 260 TFVELRI 266
               L +
Sbjct: 185 FLQGLGV 191


>gi|134299022|ref|YP_001112518.1| hypothetical protein Dred_1159 [Desulfotomaculum reducens MI-1]
 gi|134051722|gb|ABO49693.1| protein of unknown function DUF512 [Desulfotomaculum reducens MI-1]
          Length = 439

 Score = 42.8 bits (100), Expect = 0.085,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 60/185 (32%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
              +  C   C FCF  +M  S + ++           YI++                  
Sbjct: 84  FGPIRRCHNRCLFCFVDQMAPSMRESL-----------YIKDD----------------- 115

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
             RL         + +V+                + EL + + +   P+YI++H  +  E
Sbjct: 116 DYRLSFWQGNFVSLTNVK----------------DEELKRIIDQKLGPLYISVHTTNS-E 158

Query: 219 F---------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVE 263
                     + + +  +  LA AGI + +Q VL  GIND  E+      LA L      
Sbjct: 159 LRCRMLNNRHAGKILEQLKMLAEAGIEMQTQVVLCPGINDGEELKRTIRDLALLWPQVHS 218

Query: 264 LRIKP 268
           L + P
Sbjct: 219 LAVVP 223


>gi|167947811|ref|ZP_02534885.1| hypothetical protein Epers_15217 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 213

 Score = 42.8 bits (100), Expect = 0.086,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 64/168 (38%), Gaps = 26/168 (15%)

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           Q + ++ +LNI+P+     + +       G++ R   R  +K+   C   C FC     V
Sbjct: 45  QIVQRELDLNIMPQ----SVTEEESG---GLLARGRQRAFIKVQDGCRYRCTFCI----V 93

Query: 119 GSQKGTVLSSKDTEAALAYI-QEKSQ-IWEVIFTG---GDPLILSHKRLQKVLKTLRYIK 173
              +G   S    E  +A I +  S+ I EV+ TG   G         L +++  +    
Sbjct: 94  TLARGEERSRPADEEVIAEINRLHSEGIQEVVLTGVHLGGYGSDIDSDLGQLIDRVLADS 153

Query: 174 HVQILRFHSRVPIVDPQ---------RINPELIQCLKEAGKPVYIAIH 212
            +  LR  S  P   P          R  P L   L +  + + IA H
Sbjct: 154 EIPRLRVGSLEPWDLPDNFWSRFDNPRFMPHLHLPL-QRRQRLCIATH 200


>gi|320449128|ref|YP_004201224.1| radical SAM domain-containing protein [Thermus scotoductus SA-01]
 gi|320149297|gb|ADW20675.1| radical SAM domain protein [Thermus scotoductus SA-01]
          Length = 356

 Score = 42.8 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 16/126 (12%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           +HR+P  +  ++   C + C+ C R   V       L++++    L  +   +    ++ 
Sbjct: 5   LHRFPLLVAWEMTRACLLACQHC-RASAVPDPLPGELTTEEGLRLLEELATYTPKPILLP 63

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQCLKEAG-K 205
           TGGDPL      L  +L+  +        R   +V   P V P R+  E+++  KE    
Sbjct: 64  TGGDPLARPDLFL--LLEEAK--------RLGLKVGITPAVTP-RLTREVVERFKELSVH 112

Query: 206 PVYIAI 211
            + I++
Sbjct: 113 QMAISL 118


>gi|167570715|ref|ZP_02363589.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           oklahomensis C6786]
          Length = 363

 Score = 42.8 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 31/189 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R + G          +L+ ++ E           + ++  TGG+
Sbjct: 34  ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 92

Query: 154 PLILSHKRLQKVLKTLRYIKHV----QILRFHSR-VPIVDPQ---------RINPELIQC 199
           PL+   K ++ +++ L  +  V      +   +    +V            R+   L   
Sbjct: 93  PLL--RKNIEFLIERLARMTTVAGRPLDITLTTNGSLLVRKAKSLRDAGLSRVTVSLDAL 150

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLM 258
                K +      N     S + +  I     AG   +    V+ +G ND    +  + 
Sbjct: 151 DDALFKRM------NDADFASADVLDGIFAAQAAGLAPVKVNMVVKRGTNDC--EIVPMA 202

Query: 259 RTFVELRIK 267
           R F    + 
Sbjct: 203 RRFKGTGVV 211


>gi|53720059|ref|YP_109045.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei K96243]
 gi|53725728|ref|YP_102316.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           ATCC 23344]
 gi|254199210|ref|ZP_04905576.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           FMH]
 gi|254205515|ref|ZP_04911867.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           JHU]
 gi|254296849|ref|ZP_04964302.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 406e]
 gi|52210473|emb|CAH36456.1| putative molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei K96243]
 gi|52429151|gb|AAU49744.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           ATCC 23344]
 gi|147748806|gb|EDK55880.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           FMH]
 gi|147752958|gb|EDK60023.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           JHU]
 gi|157807170|gb|EDO84340.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 406e]
          Length = 360

 Score = 42.8 bits (100), Expect = 0.087,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R + G          +L+ ++ E           + ++  TGG+
Sbjct: 31  ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 89

Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
           PL+   K L+ +++ L  +  V
Sbjct: 90  PLL--RKNLEFLIERLANMTTV 109


>gi|282856153|ref|ZP_06265436.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pyramidobacter piscolens
           W5455]
 gi|282585912|gb|EFB91197.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pyramidobacter piscolens
           W5455]
          Length = 435

 Score = 42.8 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 21/138 (15%)

Query: 61  IPQKEELNILPEER-----EDP--IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
           +P   E  +  +E+     +DP  + +   +P   +  ++P +  + + H C  +C +C 
Sbjct: 108 VPDALETAMSGDEKIVLLDDDPRELHELRFAP---LERQFPWKASVMISHGCDNFCTYCI 164

Query: 114 ----RREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
               R          ++S  +   E  +  I    Q   V   G D   L       +L 
Sbjct: 165 VPYVRGRFASRSPREIMSEAEQLVEGGVKEICLLGQ--NVDTYGKD---LDRYSFADLLN 219

Query: 168 TLRYIKHVQILRFHSRVP 185
            + +IK ++ LRF +  P
Sbjct: 220 DVAHIKGLERLRFMTSYP 237


>gi|228960999|ref|ZP_04122629.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228798716|gb|EEM45699.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 339

 Score = 42.8 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G +        +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177


>gi|228955004|ref|ZP_04117021.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229072231|ref|ZP_04205438.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus F65185]
 gi|229081982|ref|ZP_04214473.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock4-2]
 gi|228701359|gb|EEL53854.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock4-2]
 gi|228710888|gb|EEL62856.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus F65185]
 gi|228804731|gb|EEM51333.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 339

 Score = 42.8 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G +        +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177


>gi|229193012|ref|ZP_04319968.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           10876]
 gi|228590459|gb|EEK48322.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC
           10876]
          Length = 339

 Score = 42.8 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G +        +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177


>gi|168181641|ref|ZP_02616305.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
 gi|237796408|ref|YP_002863960.1| MiaB family RNA modification protein [Clostridium botulinum Ba4
           str. 657]
 gi|182675137|gb|EDT87098.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
 gi|229261767|gb|ACQ52800.1| RNA modification enzyme, MiaB family [Clostridium botulinum Ba4
           str. 657]
          Length = 432

 Score = 42.8 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%)

Query: 90  VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145
           +  Y D  R  LK+   C  +C +C    ++   +G V S K       +  + +     
Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189

Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           E+I +G D             L  +L+ +  ++ ++ +R  S    +DP     E I  +
Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIGI 245

Query: 201 KEAGKPVYIAIHA 213
            +  +      H 
Sbjct: 246 SKLKR---FCPHF 255


>gi|206969465|ref|ZP_03230419.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134]
 gi|206735153|gb|EDZ52321.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134]
          Length = 334

 Score = 42.8 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G +        +L+  + E           + ++  TGG+
Sbjct: 15  ISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 73

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 74  PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 125

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 126 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 172


>gi|160944519|ref|ZP_02091747.1| hypothetical protein FAEPRAM212_02032 [Faecalibacterium prausnitzii
           M21/2]
 gi|158444301|gb|EDP21305.1| hypothetical protein FAEPRAM212_02032 [Faecalibacterium prausnitzii
           M21/2]
          Length = 325

 Score = 42.8 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 17/168 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  +C + CR+C    +   ++  VL+ ++     A   +   I  V  TGG+PL+  
Sbjct: 14  LSVTDLCNLRCRYCMPDGVEKLEREAVLTYEEFLRLAALFAQC-GIDTVRVTGGEPLV-- 70

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216
            K + +++  L+    ++ +   +         +  +L   L      V I++    P  
Sbjct: 71  RKNVAQLVAGLKATPGIRRVTLTTNA-----MLLAEQLSALLDAGLDSVNISLDTLRPEV 125

Query: 217 -YEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANL 257
             + +         A +     +G+ +    V   G+N+   E LA L
Sbjct: 126 FRQITARDDFAAVQAGLQAALESGLPVKLNCVPQAGVNEGELETLAAL 173


>gi|148265592|ref|YP_001232298.1| molybdenum cofactor biosynthesis protein A [Geobacter
           uraniireducens Rf4]
 gi|146399092|gb|ABQ27725.1| GTP cyclohydrolase subunit MoaA [Geobacter uraniireducens Rf4]
          Length = 325

 Score = 42.8 bits (100), Expect = 0.088,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 17/160 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C + C +C   + +       + S +    +A     S I ++  TGG+PL+  
Sbjct: 16  LSVTDRCNMRCVYCMPADGIPLLTHNDILSYEELLLVAKTAVASGIEKIRVTGGEPLV-- 73

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPY 217
            K +   L  L  I  ++ L   +            E+ + L++AG   + I++ +  P 
Sbjct: 74  RKGIVPFLTRLAAIPGLRQLVLTTNGL------YLAEMAESLRQAGVQRLNISLDSLQPE 127

Query: 218 EFSEEAIAA--------ISRLANAGIILLSQSVLLKGIND 249
            F+     A        I+    AG  L    V+++G+ND
Sbjct: 128 TFAGITRGADLHRVMAGIAAAEQAGFPLKINVVVMRGVND 167


>gi|310821937|ref|YP_003954295.1| molybdenum cofactor biosynthesis protein moaa [Stigmatella
           aurantiaca DW4/3-1]
 gi|309395009|gb|ADO72468.1| Molybdenum cofactor biosynthesis protein MoaA [Stigmatella
           aurantiaca DW4/3-1]
          Length = 335

 Score = 42.8 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 36/223 (16%), Positives = 69/223 (30%), Gaps = 45/223 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C   C +C         K  +LS+ + E  ++       I  V  TGG+PLI  
Sbjct: 28  LSVTDRCNFRCTYC--SPASWGGKKDLLSALEFERIVSVFASM-GIQRVRLTGGEPLIRP 84

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
              + ++ + L  +  V+ +   +          N   ++ L             N    
Sbjct: 85  D--ILEIAQRLSALPGVERVAITT----------NASHLERLA-VPLREAGVSQLN--IS 129

Query: 219 FSEEAIAAISRLANAG-----------------IILLSQSVLLKGINDDPEILANLMRTF 261
               +     R++  G                   L    V+++G+ND     A L+   
Sbjct: 130 LDTLSAETFRRISKQGDFASTLRGIDAAAAAGFASLKLNVVVMRGVNDGEA--AALVEYA 187

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304
               + P       +  G       +    +++  L+   SGL
Sbjct: 188 HARGLTP--RFIELMPFGQGE---PVPTA-ELIERLQA--SGL 222


>gi|121598421|ref|YP_993796.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           SAVP1]
 gi|124385812|ref|YP_001028740.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           NCTC 10229]
 gi|126451180|ref|YP_001081354.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           NCTC 10247]
 gi|242314341|ref|ZP_04813357.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 1106b]
 gi|251767263|ref|ZP_02266560.2| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           PRL-20]
 gi|254178129|ref|ZP_04884784.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           ATCC 10399]
 gi|254357683|ref|ZP_04973956.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           2002721280]
 gi|121227231|gb|ABM49749.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           SAVP1]
 gi|124293832|gb|ABN03101.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           NCTC 10229]
 gi|126244050|gb|ABO07143.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           NCTC 10247]
 gi|148026810|gb|EDK84831.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           2002721280]
 gi|160699168|gb|EDP89138.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           ATCC 10399]
 gi|242137580|gb|EES23982.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 1106b]
 gi|243063305|gb|EES45491.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei
           PRL-20]
          Length = 363

 Score = 42.8 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R + G          +L+ ++ E           + ++  TGG+
Sbjct: 34  ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 92

Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
           PL+   K L+ +++ L  +  V
Sbjct: 93  PLL--RKNLEFLIERLANMTTV 112


>gi|298377685|ref|ZP_06987636.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_19]
 gi|298265388|gb|EFI07050.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_19]
          Length = 444

 Score = 42.8 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 11/123 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  YC +C      G  +   ++S   E A      +    E++ TG  
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQE--VARKGGKEIVLTGVN 205

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    +++ L  +  +   R  S    ++P  I  E I       K     
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVDGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260

Query: 211 IHA 213
            H 
Sbjct: 261 FHI 263


>gi|295697132|ref|YP_003590370.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
 gi|295412734|gb|ADG07226.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
          Length = 394

 Score = 42.8 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 10/108 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           ++ ++   C ++C  C        +    LS+++    L  + E   +  V+ TGGDP  
Sbjct: 29  VIWEVTRACSLHCLHCRADAQF-RRDPRELSTEEGFRLLDELAEWK-VPLVVLTGGDPFE 86

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                    +  L      + LR  S  P   P R+  E ++ LKEAG
Sbjct: 87  RPD------VFDLVRYGAERGLRM-SVTPSATP-RVTREALERLKEAG 126


>gi|255016549|ref|ZP_05288675.1| putative Fe-S oxidoreductase [Bacteroides sp. 2_1_7]
          Length = 444

 Score = 42.8 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 11/123 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  YC +C      G  +   ++S   E A      +    E++ TG  
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQE--VARKGGKEIVLTGVN 205

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    +++ L  +  +   R  S    ++P  I  E I       K     
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVDGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260

Query: 211 IHA 213
            H 
Sbjct: 261 FHI 263


>gi|150006722|ref|YP_001301465.1| putative Fe-S oxidoreductase [Parabacteroides distasonis ATCC 8503]
 gi|149935146|gb|ABR41843.1| putative Fe-S oxidoreductase [Parabacteroides distasonis ATCC 8503]
          Length = 444

 Score = 42.8 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 11/123 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  YC +C      G  +   ++S   E A      +    E++ TG  
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQE--VARKGGKEIVLTGVN 205

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    +++ L  +  +   R  S    ++P  I  E I       K     
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVDGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260

Query: 211 IHA 213
            H 
Sbjct: 261 FHI 263


>gi|152974241|ref|YP_001373758.1| YfkB-like domain-containing protein [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152022993|gb|ABS20763.1| YfkB-like domain protein [Bacillus cytotoxicus NVH 391-98]
          Length = 375

 Score = 42.8 bits (100), Expect = 0.089,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L     E  L  + E   +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPM---ELLLKRLDEVPHLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           +S K +   +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 90  MSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|323486989|ref|ZP_08092303.1| hypothetical protein HMPREF9474_04054 [Clostridium symbiosum
           WAL-14163]
 gi|323692033|ref|ZP_08106281.1| MiaB family RNA modification enzyme [Clostridium symbiosum
           WAL-14673]
 gi|323399701|gb|EGA92085.1| hypothetical protein HMPREF9474_04054 [Clostridium symbiosum
           WAL-14163]
 gi|323503956|gb|EGB19770.1| MiaB family RNA modification enzyme [Clostridium symbiosum
           WAL-14673]
          Length = 445

 Score = 42.8 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 54/154 (35%), Gaps = 27/154 (17%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGG 152
             LK+   C   C +C    + G  +   +    TEA     Q   ++     E    G 
Sbjct: 146 AFLKISEGCNKRCTYCIIPSLRGPYRSVPMERLLTEAGQLAGQGVKELILVAQETTLYGT 205

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
           D  +   K L ++L+ L  I  ++ LR         P+ I  EL+Q +KE  K   Y+ I
Sbjct: 206 D--LYGKKMLPELLRRLAEIPGIEWLRVQ----YCYPEEITEELVQVIKEEEKVCHYLDI 259

Query: 212 HANHP-------------YEFSEEAIAAISRLAN 232
              H               E   E    I+RL  
Sbjct: 260 PIQHASDRILKSMGRKTSRE---ELKERIARLRE 290


>gi|222475965|ref|YP_002564486.1| Radical SAM domain protein [Halorubrum lacusprofundi ATCC 49239]
 gi|222454336|gb|ACM58600.1| Radical SAM domain protein [Halorubrum lacusprofundi ATCC 49239]
          Length = 258

 Score = 42.8 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 5/74 (6%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           +      C + C FC          G   + +D ++ +  +    Q   V+ TGG+PLI 
Sbjct: 42  VFVRTSGCNLRCWFCDSYHTSWEPTG---AWRDVDSIIEEVHSHEQANHVVLTGGEPLIH 98

Query: 158 SHKRLQKVLKTLRY 171
                 ++L+ L  
Sbjct: 99  EESI--ELLERLAA 110


>gi|150018969|ref|YP_001311223.1| radical SAM domain-containing protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905434|gb|ABR36267.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 453

 Score = 42.8 bits (100), Expect = 0.090,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 10/114 (8%)

Query: 65  EELNILPEE----REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +E+  L EE     ED   +  HS +      Y   I L ++H C + C++CF  E    
Sbjct: 63  DEIQELAEEGILYSEDQYEEIAHSSMD--DRDYIKAICLNVIHGCNLRCKYCFADEGEYH 120

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171
             G V+S+   + A+ Y+ ++S      E+   GG+P  L    +++++K  R 
Sbjct: 121 GHGGVMSADTAKKAIDYVIKRSGPRKNIEIDLFGGEP-TLIMDTIKEIIKYARD 173


>gi|268326277|emb|CBH39865.1| conserved hypothetical protein, radical SAM superfamily [uncultured
           archaeon]
          Length = 395

 Score = 42.8 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 16/115 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           ++ ++   C + C  C      G +     L+ ++  A +  I     I   +FTGG+PL
Sbjct: 77  VVWEMTGRCNLDCIHC---HAFGGEASYDELTEEEGRALIDQIAA-LDIRSFVFTGGEPL 132

Query: 156 ILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +     L  ++   + I   V I    +         I  E+ + L++    V I
Sbjct: 133 LRED--LFDLIAYAKSIGFSVFIATNGT--------LITKEVAKLLRKYNVGVVI 177


>gi|268325167|emb|CBH38755.1| conserved hypothetical protein, radical SAM superfamily [uncultured
           archaeon]
          Length = 395

 Score = 42.8 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 16/115 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           ++ ++   C + C  C      G +     L+ ++  A +  I     I   +FTGG+PL
Sbjct: 77  VVWEMTGRCNLDCIHC---HAFGGEASYDELTEEEGRALIDQIAA-LDIRSFVFTGGEPL 132

Query: 156 ILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +     L  ++   + I   V I    +         I  E+ + L++    V I
Sbjct: 133 LRED--LFDLIAYAKSIGFSVFIATNGT--------LITKEVAKLLRKYNVGVVI 177


>gi|184155556|ref|YP_001843896.1| molybdenum cofactor biosynthesis protein A [Lactobacillus fermentum
           IFO 3956]
 gi|260662959|ref|ZP_05863852.1| molybdenum cofactor biosynthesis protein A [Lactobacillus fermentum
           28-3-CHN]
 gi|226704822|sp|B2GCN4|MOAA_LACF3 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|183226900|dbj|BAG27416.1| molybdopterin precursor synthase MoaA [Lactobacillus fermentum IFO
           3956]
 gi|260552580|gb|EEX25580.1| molybdenum cofactor biosynthesis protein A [Lactobacillus fermentum
           28-3-CHN]
          Length = 332

 Score = 42.8 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R  D + + +   C + C +C  +E +       VLS  +    +    +   + +V  T
Sbjct: 10  RLHDYVRISITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLITNFAQ-LGVHKVRIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           GG+PL+ +      +++ ++ I  ++ +   +
Sbjct: 69  GGEPLLRTDVV--DIVRRIKEIDGIEDVSITT 98


>gi|160883454|ref|ZP_02064457.1| hypothetical protein BACOVA_01423 [Bacteroides ovatus ATCC 8483]
 gi|237720232|ref|ZP_04550713.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 2_2_4]
 gi|293371156|ref|ZP_06617693.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides ovatus SD CMC 3f]
 gi|156111174|gb|EDO12919.1| hypothetical protein BACOVA_01423 [Bacteroides ovatus ATCC 8483]
 gi|229450784|gb|EEO56575.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 2_2_4]
 gi|292633814|gb|EFF52366.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides ovatus SD CMC 3f]
          Length = 152

 Score = 42.8 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            C  +C  C   E    + G  L+ +  ++ +  I+    +  V F+GGDP     + L
Sbjct: 25  GCSHHCPGCHNPESWNPRAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEEFL 83


>gi|15679546|ref|NP_276663.1| molybdenum cofactor biosynthesis protein A [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622671|gb|AAB86024.1| molybdenum cofactor biosynthesis MoaA [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 316

 Score = 42.8 bits (100), Expect = 0.091,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 30/164 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C V C +C R  M  S+    LS+ D E     +     + ++  +GG+PLI  
Sbjct: 27  LSITGRCNVNCIYCHRDGMTSSRGE--LSAADIEKLCR-VASDLGVGKIRLSGGEPLIRD 83

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
              + ++++ +  I   + +   +         +       L EAG    + +  +    
Sbjct: 84  D--IVEIVERINNIG-FRDISITTNG------TLLEGYSAALSEAGLD-RVNVSFDT--- 130

Query: 219 FSEEAIAAISR-----LANAGI---------ILLSQSVLLKGIN 248
            + E    I+R        +GI          +    V+L+G+N
Sbjct: 131 LNPETYRFITRKDYLERVKSGITSAVDVGLDPVKINMVILRGVN 174


>gi|227514963|ref|ZP_03945012.1| molybdenum (Mo2+) cofactor biosynthesis enzyme [Lactobacillus
           fermentum ATCC 14931]
 gi|227086662|gb|EEI21974.1| molybdenum (Mo2+) cofactor biosynthesis enzyme [Lactobacillus
           fermentum ATCC 14931]
          Length = 332

 Score = 42.8 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 4/92 (4%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R  D + + +   C + C +C  +E +       VLS  +    +    +   + +V  T
Sbjct: 10  RLHDYVRISITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLITNFAQ-LGVHKVRIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           GG+PL+ +      +++ ++ I  ++ +   +
Sbjct: 69  GGEPLLRTDVV--DIVRRIKEIDGIEDVSITT 98


>gi|126441374|ref|YP_001059824.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 668]
 gi|126220867|gb|ABN84373.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 668]
          Length = 377

 Score = 42.8 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 21/131 (16%)

Query: 55  PIARQFIPQ-----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109
           P++R+ IP        +L+  P      + D    PL+ +         + +   C   C
Sbjct: 7   PMSRRIIPVTPVSAAPDLSGAPLTPTGTLRDALARPLRDLR--------ISVTDRCNFRC 58

Query: 110 RFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164
            +C  R + G          +L+ ++ E           + ++  TGG+PL+   K L+ 
Sbjct: 59  VYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPLL--RKNLEF 115

Query: 165 VLKTLRYIKHV 175
           +++ L  +  V
Sbjct: 116 LIERLANMTTV 126


>gi|150018843|ref|YP_001311097.1| radical SAM domain-containing protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149905308|gb|ABR36141.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 288

 Score = 42.8 bits (100), Expect = 0.092,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 5/78 (6%)

Query: 95  DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGG 152
           + +++++   C    C FC    M  S+K T+ S +D +A + Y +E  S + ++    G
Sbjct: 14  NSLIIQVTLGCSHNKCNFC---NMYKSKKFTIKSLEDIKADVNYFREMYSYVEKIFLADG 70

Query: 153 DPLILSHKRLQKVLKTLR 170
           D LI+  ++L+++L  +R
Sbjct: 71  DALIIPTEKLKEILTLIR 88


>gi|46447397|ref|YP_008762.1| putative 2-methylthioadenine synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|46401038|emb|CAF24487.1| putative 2-methylthioadenine synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 434

 Score = 42.4 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 22/163 (13%)

Query: 60  FIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
            IP +E E  +     ++ + + + +           R  +K+   C  +C +C     V
Sbjct: 100 VIPNREKEQLLARLFPKENLPEFSITQFDS-----HTRAFIKVQDGCNSFCTYCII-PYV 153

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG-----DPLILS---HKRLQKVLKTLR 170
             +  +    +  E A A I       E++ TG      D  +       RL ++++ + 
Sbjct: 154 RGRSRSRSVEEVLEEAKALISN--GYKEIVLTGINIGDFDGKVAKGETPVRLSELVRMVD 211

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
            +  ++ LR  S    +DP  ++ EL   +   GK    ++H 
Sbjct: 212 QLPGLERLRLSS----IDPDEVDDELSDAILN-GKHTCHSMHI 249


>gi|313904016|ref|ZP_07837396.1| MiaB-like tRNA modifying enzyme YliG [Eubacterium cellulosolvens 6]
 gi|313471165|gb|EFR66487.1| MiaB-like tRNA modifying enzyme YliG [Eubacterium cellulosolvens 6]
          Length = 453

 Score = 42.4 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIFTGG 152
           LK+   C  +C +C   +M G  +   +  +D       +      ++     E    G 
Sbjct: 148 LKIAEGCDRHCTYCAIPDMRGPYR--SVPMEDLLEEARGLAADGVKELILVAQETTLYGT 205

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
           D  + + KRL  +LK L  I+ +  +R    V    P+ I PELIQ +KE  K   Y+ I
Sbjct: 206 D--LYNEKRLHILLKELCKIEDIHWIR----VLYCYPEEIYPELIQTMKEEPKICHYMDI 259

Query: 212 HANHPY 217
              H  
Sbjct: 260 PIQHAN 265


>gi|285017403|ref|YP_003375114.1| molybdenum cofactor biosynthesis protein a [Xanthomonas albilineans
           GPE PC73]
 gi|283472621|emb|CBA15126.1| probable molybdenum cofactor biosynthesis protein a [Xanthomonas
           albilineans]
          Length = 344

 Score = 42.4 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 28/176 (15%)

Query: 94  PDRIL----LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIW 145
             R L    L ++  C   C +C   + V    G      LS    E           + 
Sbjct: 18  RGRALHDLRLSVIEACNFRCGYCMPADKVPDDYGFDAAGRLSFAQIETLARAFVRN-GVR 76

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           ++  TGG+PL+   + L ++++ L  I  V+ L   +         +     Q L++AG 
Sbjct: 77  KLRLTGGEPLL--RRELPELVRRLARIAGVEDLAMTTNGV------LLATHAQALRDAGL 128

Query: 206 P-VYIAIHANHP---YEFS------EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
             V +++ A  P    + S       + +A I     AG+  +    V+ +G+NDD
Sbjct: 129 QRVTVSLDAIDPLLFRQLSGGRGEIAQVLAGIDAAVAAGLGPVKLNCVVQRGVNDD 184


>gi|326796263|ref|YP_004314083.1| (dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Marinomonas mediterranea MMB-1]
 gi|326547027|gb|ADZ92247.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Marinomonas mediterranea MMB-1]
          Length = 450

 Score = 42.4 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 19/125 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDP 154
             + ++  C  YC FC     V         S+  E  L  + + S+  + E+   G + 
Sbjct: 148 AFVSVMEGCSKYCTFC-----VVPYTRGEEVSRPYEDVLKEVAQLSEQGVREIHLLGQNV 202

Query: 155 LILSHKR-------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                +        L  ++  +  I+ V+ +RF +  P+         LI+  +   K +
Sbjct: 203 NAYRGETQDGDEADLADIIHAIARIEGVERIRFTTSHPV----EFTDSLIEAFRTEPK-L 257

Query: 208 YIAIH 212
              +H
Sbjct: 258 VSHLH 262


>gi|52081091|ref|YP_079882.1| hypothetical protein BL02101 [Bacillus licheniformis ATCC 14580]
 gi|52786470|ref|YP_092299.1| YqeV [Bacillus licheniformis ATCC 14580]
 gi|319644951|ref|ZP_07999184.1| hypothetical protein HMPREF1012_00217 [Bacillus sp. BT1B_CT2]
 gi|52004302|gb|AAU24244.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
 gi|52348972|gb|AAU41606.1| YqeV [Bacillus licheniformis ATCC 14580]
 gi|317392760|gb|EFV73554.1| hypothetical protein HMPREF1012_00217 [Bacillus sp. BT1B_CT2]
          Length = 451

 Score = 42.4 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     +L S+D E  +   Q+   +   E++ T 
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIRQAQQLVDAGYKEIVLTG 196

Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   +      ++LK L   +K ++ +R  S    ++  +I  E+I+ L  +
Sbjct: 197 IHTGGYGED---MKDYNFAQLLKELDSRVKGLKRIRISS----IEASQITDEVIEVLDRS 249

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 250 DK-IVRHLHI 258


>gi|254302542|ref|ZP_04969900.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
 gi|148322734|gb|EDK87984.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium
           nucleatum subsp. polymorphum ATCC 10953]
          Length = 348

 Score = 42.4 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 19/126 (15%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
           ++ +  +      CP  C FC ++++ G +    +S  D +  +  Y++      I +V 
Sbjct: 2   KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH------VQILRFHSRVPIVDPQRINPELIQCLKE 202
           F GG         LQK  + L  +KH      V+ +R  +R     P+ I+ E++  LK+
Sbjct: 60  FFGG-TFTGISMNLQK--EYLEVVKHYIDNNDVEGVRISTR-----PECIDDEILTQLKK 111

Query: 203 AGKPVY 208
            G    
Sbjct: 112 YGVKTI 117


>gi|108801200|ref|YP_641397.1| radical SAM family protein [Mycobacterium sp. MCS]
 gi|119870351|ref|YP_940303.1| radical SAM domain-containing protein [Mycobacterium sp. KMS]
 gi|126437180|ref|YP_001072871.1| radical SAM domain-containing protein [Mycobacterium sp. JLS]
 gi|108771619|gb|ABG10341.1| Radical SAM [Mycobacterium sp. MCS]
 gi|119696440|gb|ABL93513.1| Radical SAM domain protein [Mycobacterium sp. KMS]
 gi|126236980|gb|ABO00381.1| Radical SAM domain protein [Mycobacterium sp. JLS]
          Length = 514

 Score = 42.4 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 67/198 (33%), Gaps = 42/198 (21%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKD 130
           DPI       L  +  ++   +L  +   C + C  CF         V      + +   
Sbjct: 90  DPIPQAYLRGLPEMQTQHTCILLQDISDTCNLRCPTCFTESSPDLRNVVPVAEVLANVDQ 149

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL------RFHSRV 184
                   +E  ++  V+ +GG+P +    RL ++L  L      +IL      R  +  
Sbjct: 150 RLR-----RENGRLDVVMLSGGEPTLHP--RLAELLTELVDRPITRILVNTNGVRIAT-- 200

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE----------FSEEAIAAISRLANAG 234
                   +  L+  L    + V + +  +   E                AA+ RL+   
Sbjct: 201 --------DDALLDLLTAHRERVEVYLQYDGLSEAAHRHHRGGDLRRIKRAALQRLSERE 252

Query: 235 I--ILLSQSVLLKGINDD 250
           I   L+  + L  G+NDD
Sbjct: 253 IFTTLVMTTAL--GVNDD 268


>gi|46581406|ref|YP_012214.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450828|gb|AAS97474.1| radical SAM domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311235063|gb|ADP87917.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1]
          Length = 370

 Score = 42.4 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 20/180 (11%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWEVIF 149
           +P R+ L+L + C   C  C R    G          D +    AL  I +       +F
Sbjct: 86  FPQRLQLELTNCCNNDCVMCPRH---GGHFTRKPKHMDLDLVRRALDEIAQHYNYQLQLF 142

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
             G+PL+    R+ ++L  L     +      S+   + P  +   L   +      +  
Sbjct: 143 HIGEPLLHP--RIFEILDMLEDYPTLGRKWISSKGQELTPDIMRRVLTSKVDYFNYSLLA 200

Query: 210 AIHANHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
              A +                + RLA+    L  Q   L+        +  +     E+
Sbjct: 201 MTPATYAR-IVPNGDYATVRGNLERLADLKRDLGVQRPYLR------AQMIEMDEALHEI 253


>gi|20094510|ref|NP_614357.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19]
 gi|19887619|gb|AAM02287.1| Predicted Fe-S oxidoreductase [Methanopyrus kandleri AV19]
          Length = 499

 Score = 42.4 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 38/174 (21%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPL 155
           ++ + + C + C  CF             S +  E  L  ++ +  +    V F GG+PL
Sbjct: 96  IIDVTNRCNMNCPVCFANAEAKGYV-YEPSLEQIEEMLDLLRSERPVPAPAVQFAGGEPL 154

Query: 156 ILSHKRLQKVLKTLRYIK----HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           +        +++ +        HVQI         V+  R NPEL + L  AG  V + +
Sbjct: 155 VRED-----IVEIVAAADERGFHVQIATNG-----VEFAR-NPELAEDLHAAGLNV-VYL 202

Query: 212 HANHPY-EFSEEAI----------AAISRLANAGIILLSQSVLL----KGINDD 250
             +    E  EE             AI  L   GI     +VL+    +G+NDD
Sbjct: 203 QFDGLNPEIYEEIRGSRKVLELKKEAIKVLEREGIS----TVLVPTLARGVNDD 252


>gi|51892771|ref|YP_075462.1| 2-methylthioadenine synthetase [Symbiobacterium thermophilum IAM
           14863]
 gi|81388877|sp|Q67NX5|RIMO_SYMTH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|51856460|dbj|BAD40618.1| 2-methylthioadenine synthetase [Symbiobacterium thermophilum IAM
           14863]
          Length = 485

 Score = 42.4 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 12/110 (10%)

Query: 96  RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFT 150
              LK+   C   C FC     R         +++      A +  ++E   I  +  + 
Sbjct: 163 TAYLKIAEGCDCACAFCSIPLMRGRHRSRPIESIVDEARRLAGMG-VRELVVISQDTTYY 221

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           G D  +     L ++L+ L  +  ++ +R H       P RI  ELI+ +
Sbjct: 222 GLD--LYRKPMLARLLRELAQVDGIRWIRIHYS----YPTRITDELIEVI 265


>gi|310828246|ref|YP_003960603.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium limosum
           KIST612]
 gi|308739980|gb|ADO37640.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium limosum
           KIST612]
          Length = 439

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 18/140 (12%)

Query: 72  EEREDPIGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
            ER   I D++H  ++ +    +YP +  + +++ C  +C +C     +         S+
Sbjct: 123 GERIFEIWDDSHEIIEDLPVDRKYPFKSFVTIMNGCNNFCTYC-----IVPYTRGREVSR 177

Query: 130 DTEAALAYIQ--EKSQIWEVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHS 182
             E  +  +         EV   G +     +          +L+ L  I+ ++ +RF +
Sbjct: 178 QPEKIIEEVTRLADEGCLEVTLLGQNVNSYGNDLKTGYHFADLLRDLNQIEKIKRIRFMT 237

Query: 183 RVPIVDPQRINPELIQCLKE 202
                 P+ +  E+I+ + +
Sbjct: 238 SH----PKDLTDEVIEAIAQ 253


>gi|256751942|ref|ZP_05492812.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749147|gb|EEU62181.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
          Length = 522

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 25/160 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +++ +   C   C FC     +G  +     S D +  + +++  +  + +  TGG+PLI
Sbjct: 206 VIIGITRECNGNCNFC----QIGGPQKDTNKSFDCKQLVRFLKGNN--YHIQITGGEPLI 259

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-----KPVYIAI 211
                L  +++ L+   H+  +   + + +     I+ E I+ LKE+        V I  
Sbjct: 260 -RKSELTPLIRELKKDGHI--ITLLTNLVL-----IDREFIELLKESFSVLDVVQVSIYA 311

Query: 212 HANHPYEFS------EEAIAAISRLANAGIILLSQSVLLK 245
           H    +E         +    I+ + N GI L +  VL K
Sbjct: 312 HNPQLHEIISGRNDWSKLNTLITEVINNGIQLRANLVLTK 351


>gi|119897898|ref|YP_933111.1| molybdenum cofactor biosynthesis protein A [Azoarcus sp. BH72]
 gi|119670311|emb|CAL94224.1| molybdenum cofactor biosynthesis protein A [Azoarcus sp. BH72]
          Length = 357

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 71/181 (39%), Gaps = 33/181 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  RE+         +G +LS ++          +  + ++  TGG+
Sbjct: 39  ISVTDRCNFRCVYCMPREVFDKDYPFLPRGQLLSFEEILRVARLFVAR-GVRKIRITGGE 97

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI---- 209
           PL+     ++++++ L  +  V+ L   +         + P L + L++AG         
Sbjct: 98  PLLRKD--IERLVEMLAALDGVE-LTLTTNGV------LLPRLAKKLRDAGLHRVTVSLD 148

Query: 210 ---------AIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGIND-DPEILANLM 258
                       A++P E     +  I+   +AG   +    V+ +G ND D E +A   
Sbjct: 149 ALDDATFRRMNDADYPVE---RVLEGIAAARDAGFEGIKVNMVVKRGTNDQDIEAMAQHF 205

Query: 259 R 259
           R
Sbjct: 206 R 206


>gi|310658041|ref|YP_003935762.1| radical sam domain-containing protein [Clostridium sticklandii DSM
           519]
 gi|308824819|emb|CBH20857.1| Radical SAM domain protein [Clostridium sticklandii]
          Length = 304

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 76/210 (36%), Gaps = 38/210 (18%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI- 138
           D + + +KGI+        + L   C   C +C  R             +  E A+  + 
Sbjct: 14  DMHFTKVKGILSPKNG---MNLYRGCTHGCIYCDSRSTCYQMNHKFEDIEIKENAIELLE 70

Query: 139 ----QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH----SRVPIVDPQ 190
               +++ +    + +  DP I    +L+   K L     V   RF     ++  IV   
Sbjct: 71  DALKRKRKKCMIGMGSMTDPYIPEEIKLKHTRKALEV---VSRYRFGITLITKSNIVL-- 125

Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEF----------SEEAIAAISRLANAGII-LLS 239
           R + +L++ + E  K V       +  E           ++E   A+  L +AGI  ++ 
Sbjct: 126 R-DLDLLKEINEKTKCVVQMTLTTYDEELCKEIEPNVSTTKERFEALLTLRDAGIPTVVW 184

Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPY 269
            + LL  IND  E L         L I  Y
Sbjct: 185 LTPLLPYINDTEENL---------LGILNY 205


>gi|288801250|ref|ZP_06406705.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288331861|gb|EFC70344.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 447

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 50/125 (40%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  +C +C      G  +   +SS  +  E A      +    E++ TG
Sbjct: 154 RTRYFLKVQDGCSYFCTYCTIPFARGFSRNPSISSLVEQAEQA-----AREGGKEIVLTG 208

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
              GD  + +++    ++K L  ++ ++  R  S    ++P  ++ E+I+    +     
Sbjct: 209 VNIGDFGVSTNETFFDLIKALDKVEGIKRFRISS----LEPDLLSDEIIEYCANSR---A 261

Query: 209 IAIHA 213
              H 
Sbjct: 262 FMPHF 266


>gi|282856950|ref|ZP_06266205.1| radical SAM domain protein [Pyramidobacter piscolens W5455]
 gi|282585241|gb|EFB90554.1| radical SAM domain protein [Pyramidobacter piscolens W5455]
          Length = 344

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 29/153 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-------IFTG 151
             +   C   C+ C+   +        ++S         +        V         TG
Sbjct: 9   WHITDDCDQRCKHCY---IYSGGAKRCVNSMSWAQMEDVLANCHDFCSVYRRRPYFYITG 65

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG---KPVY 208
           GDP++       ++LK LR +           V + +P  ++  +   LKE G     + 
Sbjct: 66  GDPILHPD--FWRLLKKLRKMD-------APFVILGNPFHLDDTVCARLKELGCEQYQLS 116

Query: 209 I----AIH--ANHPYEFSEEAIAAISRLANAGI 235
           +      H     P  F    +  IS L  AGI
Sbjct: 117 LDGLRETHDWFRRPGSFDC-TLEKISALKKAGI 148


>gi|282163555|ref|YP_003355940.1| hypothetical protein MCP_0885 [Methanocella paludicola SANAE]
 gi|282155869|dbj|BAI60957.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 375

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 17/115 (14%), Positives = 44/115 (38%), Gaps = 13/115 (11%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R P  + +++   C + C +C       +      L  ++       +  +  + +V  +
Sbjct: 5   RSPRSVDIEITGKCNLRCLYC--SHFTSASDISNDLPKEEWLEFFKGL-NRCSVMDVTLS 61

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           GG+P   S   ++++++ +     +  +RF     + +   I  EL   L    +
Sbjct: 62  GGEPFCRSD--IREIIEGII----LNRMRF---SILTNGTLITDELAAFLSSTRR 107


>gi|270295900|ref|ZP_06202100.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. D20]
 gi|270273304|gb|EFA19166.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. D20]
          Length = 438

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 55/137 (40%), Gaps = 8/137 (5%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  YC +C      G  +   ++S   +A+ A  +   +I       GD
Sbjct: 148 RTRFFLKVQDGCDYYCSYCTIPFARGRSRNGSIASMVEQASQAAAEGGKEIVLTGVNIGD 207

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
               + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  + +      H 
Sbjct: 208 FGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEYVSRSRR---FMPHF 260

Query: 214 NHP-YEFSEEAIAAISR 229
           + P    S+E +  + R
Sbjct: 261 HIPLQSGSDEVLKLMRR 277


>gi|256545382|ref|ZP_05472745.1| Fe-S oxidoreductase [Anaerococcus vaginalis ATCC 51170]
 gi|256398943|gb|EEU12557.1| Fe-S oxidoreductase [Anaerococcus vaginalis ATCC 51170]
          Length = 432

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 16/118 (13%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGG 152
            R  +K+   C +YC +C             ++S+D  + +   +    +   E++ TG 
Sbjct: 142 TRAYIKIQDGCNMYCSYCLI-----PYARGNIASRDLVSIIDEAKRLRDNGYKEIVLTGI 196

Query: 153 DPLILS-----HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                         L  V++ +  I  ++ +R  S    ++P+ I+ E ++ +K+  K
Sbjct: 197 HVASYGKDFDLDISLIDVIEHIAKIDGIERIRLSS----MEPRHIDREFLKRMKDTKK 250


>gi|226324639|ref|ZP_03800157.1| hypothetical protein COPCOM_02424 [Coprococcus comes ATCC 27758]
 gi|225207087|gb|EEG89441.1| hypothetical protein COPCOM_02424 [Coprococcus comes ATCC 27758]
          Length = 441

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 26/133 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C      G  +      +D    +  + E     EV+ TG  
Sbjct: 144 HTRAYLKVQDGCNQFCTYCIIPYARGRVRSR--KKEDVVEEVRTLAEH-GYQEVVLTGI- 199

Query: 154 PLILSHKRLQK-------------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
              LS   L+              +++ +  ++ ++ +R  S    ++P+ +  E  + L
Sbjct: 200 --HLSSYGLEWKDENGKQTEGLLDLIRAVHGVEGIKRIRLGS----LEPRIVTEEFAKEL 253

Query: 201 KEAGKPVYIAIHA 213
               K   I  H 
Sbjct: 254 ACLPK---ICPHF 263


>gi|220903851|ref|YP_002479163.1| Radical SAM domain-containing protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219868150|gb|ACL48485.1| Radical SAM domain protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 296

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 66/200 (33%), Gaps = 54/200 (27%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            HR   R  L +   C V C F  RR         G     +   +  EAAL  +++   
Sbjct: 18  AHRSFGRAHLPVAAGCNVQCGFYDRRYSCVNESRPGVTARLLEPEEALEAALRAVKQMPH 77

Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVP---------------- 185
           +  +   G GDPL  + + L   L+ LR  + H+ +    +                   
Sbjct: 78  LSVIGIAGPGDPLADAGRTLHT-LEALRKALPHILLC-LSTNGLALPLHAAALSSLGVGH 135

Query: 186 ------IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA---------ISRL 230
                  VDP  I  ++   + +                 +    AA         I RL
Sbjct: 136 VTVTVNAVDPS-IGADIYTWVSDG------------ARRLTGTDAAALLLERQEEGIRRL 182

Query: 231 ANAGIILLSQSVLLKGINDD 250
             AG+ +   SV++ GIND 
Sbjct: 183 KAAGVTVKINSVVIPGINDR 202


>gi|190574699|ref|YP_001972544.1| putative molybdenum cofactor biosynthesis protein A
           [Stenotrophomonas maltophilia K279a]
 gi|226707389|sp|B2FUM0|MOAA_STRMK RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|190012621|emb|CAQ46249.1| putative molybdenum cofactor biosynthesis protein A
           [Stenotrophomonas maltophilia K279a]
          Length = 326

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 55/158 (34%), Gaps = 11/158 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L L   C   C +C         +   L   +    +        + ++  TGG+P +  
Sbjct: 17  LSLTEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAA-LGMSKIRLTGGEPSLRK 75

Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHA 213
              L +++ T+  +  ++ +      + +P   P   R     +    ++ +        
Sbjct: 76  D--LDEIIATVAAVPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFKTIT 133

Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDD 250
            H      E    ++     G+  +   +VLL+G+NDD
Sbjct: 134 GHDR--LPEIEQGLALAQALGLPAIKLNAVLLRGLNDD 169


>gi|167903657|ref|ZP_02490862.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei NCTC 13177]
          Length = 370

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R + G          +L+ ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99

Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
           PL+   K L+ +++ L  +  V
Sbjct: 100 PLL--RKNLEFLIERLANMTTV 119


>gi|160890923|ref|ZP_02071926.1| hypothetical protein BACUNI_03368 [Bacteroides uniformis ATCC 8492]
 gi|317479661|ref|ZP_07938785.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 4_1_36]
 gi|156859922|gb|EDO53353.1| hypothetical protein BACUNI_03368 [Bacteroides uniformis ATCC 8492]
 gi|316904162|gb|EFV25992.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 4_1_36]
          Length = 438

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 55/137 (40%), Gaps = 8/137 (5%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  YC +C      G  +   ++S   +A+ A  +   +I       GD
Sbjct: 148 RTRFFLKVQDGCDYYCSYCTIPFARGRSRNGSIASMVEQASQAAAEGGKEIVLTGVNIGD 207

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
               + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  + +      H 
Sbjct: 208 FGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEYVSRSRR---FMPHF 260

Query: 214 NHP-YEFSEEAIAAISR 229
           + P    S+E +  + R
Sbjct: 261 HIPLQSGSDEVLKLMRR 277


>gi|158320492|ref|YP_001512999.1| radical SAM domain-containing protein [Alkaliphilus oremlandii
           OhILAs]
 gi|158140691|gb|ABW19003.1| Radical SAM domain protein [Alkaliphilus oremlandii OhILAs]
          Length = 342

 Score = 42.4 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 30/186 (16%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +      CP  C FC ++++ G           +  EA L ++++ ++  E+ F GG   
Sbjct: 10  IFIPHRGCPHDCSFCNQKKIAGIGTDVTAEQVLEIIEAQLEHLKDVNRPKEIAFYGG-SF 68

Query: 156 I-LSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--- 208
             L +++ +++L        +  +Q +R  +R     P  IN E++Q L   G  +    
Sbjct: 69  TGLPYEQQRQLLAMAYEKKKLNFIQDIRISTR-----PDYINEEILQLLGSYGVSIIELG 123

Query: 209 ------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQ-SVLLKGINDDPEILANLM 258
                   +  N   H  E   +   A + +    I L  Q  V L G  D  E +    
Sbjct: 124 VQSTDPTVLELNNRGHSKE---DVYRAAALIKKQNIQLGLQMMVGLYG--DTKEKMLRTA 178

Query: 259 RTFVEL 264
           R  ++ 
Sbjct: 179 RDIIDC 184


>gi|313893435|ref|ZP_07827007.1| tRNA methylthiotransferase YqeV [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313442076|gb|EFR60496.1| tRNA methylthiotransferase YqeV [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 431

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 17/124 (13%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-- 151
           R  +K+   C  YC FC     +       L S+  E  +   +        E++ TG  
Sbjct: 145 RAFMKIQEGCNNYCSFC-----IIPYTRGKLKSRKIEDIVEEAKRLVDHGFHEIVLTGIH 199

Query: 152 -GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            G+  +    R  L  V+K L  I  +  +RF S    ++   ++ EL++ L +  K V 
Sbjct: 200 LGNYGVELPGRPTLADVVKALLEIPELYRIRFGS----IESVEVSDELVE-LMDTDKRVC 254

Query: 209 IAIH 212
             +H
Sbjct: 255 PNLH 258


>gi|187932620|ref|YP_001885098.1| hypothetical protein CLL_A0897 [Clostridium botulinum B str. Eklund
           17B]
 gi|187720773|gb|ACD21994.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund
           17B]
          Length = 434

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 15/125 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C FC      G+        +     +  + E     EVI +G  
Sbjct: 141 KTRAFLKIQDGCNRFCTFCLIPYARGA--TCSKKPEKVLEEVKKLAEH-GFKEVILSGIH 197

Query: 154 PLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                        L  +L+ +  I+ +  +R  S    ++P     E+I  +K   K   
Sbjct: 198 TASYGVDLGTGVTLISLLEDIEKIEGIDRVRIGS----IEPAFFTDEVINKIKNMKK--- 250

Query: 209 IAIHA 213
           +  H 
Sbjct: 251 LCPHF 255


>gi|330444283|ref|YP_004377269.1| MiaB-like tRNA modifying protein [Chlamydophila pecorum E58]
 gi|328807393|gb|AEB41566.1| MiaB-like tRNA modifying enzyme [Chlamydophila pecorum E58]
          Length = 425

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 15/112 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  +K+   C  +C +C    + G            +  L  I+   +    EV+ +G
Sbjct: 138 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPS-----QEILEEIRTLIEGGYREVVISG 192

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
              GD        L  +L+ +  +  ++ LR  S    +DP  +  +L Q L
Sbjct: 193 INVGD-YSHEGDSLASLLRKIDMLPGLERLRVSS----IDPDDVQEDLCQAL 239


>gi|154253144|ref|YP_001413968.1| molybdenum cofactor biosynthesis protein A [Parvibaculum
           lavamentivorans DS-1]
 gi|154157094|gb|ABS64311.1| molybdenum cofactor biosynthesis protein A [Parvibaculum
           lavamentivorans DS-1]
          Length = 345

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 63/162 (38%), Gaps = 21/162 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +       + ++  TGG+PL+  
Sbjct: 30  VSVTDRCDFRCVYCMSEHMNFLPKPELLTLEELDRVCSAFIA-KGVRKLRLTGGEPLVRR 88

Query: 159 H--KRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
                ++ + + L    +  + +    S++      R   +L        + + +++   
Sbjct: 89  DVMTLIRSLGRHLESGALDELTLTTNGSQL-----ARYADDLHAA---GIRRINVSLDTL 140

Query: 215 HPY---EFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248
           +P    E +      + +  I+    AG+ +   +V LKG+N
Sbjct: 141 NPDLFAEITRWGRLPQVLDGIAAAKRAGLQIKINTVALKGVN 182


>gi|152991807|ref|YP_001357528.1| molybdenum cofactor biosynthesis protein A [Sulfurovum sp. NBC37-1]
 gi|166217892|sp|A6Q6R2|MOAA_SULNB RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|151423668|dbj|BAF71171.1| molybdenum cofactor biosynthesis protein A [Sulfurovum sp. NBC37-1]
          Length = 326

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 30/180 (16%), Positives = 67/180 (37%), Gaps = 15/180 (8%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C   C++C   +      K  +LS ++    +  +     + ++  TGG+PL+ 
Sbjct: 15  VSVTERCNFRCQYCMPEKPFSWVPKENLLSFEELFLFMK-VAMDEGVNKIRITGGEPLLR 73

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI------AI 211
               L   +K +   K    L   +   +  PQ    + ++        + +        
Sbjct: 74  ED--LDSFIKMIHDYKPDIDLALTTNAYL-LPQ--TAQKLKDAGLKRLNISLDSLKPEVA 128

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP--EILANLMRTFVELRIKPY 269
           H     +   + +  I +    G+ +    V LKGIND+   +++   M   +++R   Y
Sbjct: 129 HQIAQKDVLGQVLKGIDKALEVGLGVKINMVPLKGINDNEILDVMEYCMDRNIKIRFIEY 188


>gi|20094416|ref|NP_614263.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19]
 gi|19887500|gb|AAM02193.1| Predicted Fe-S oxidoreductase [Methanopyrus kandleri AV19]
          Length = 403

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 7/83 (8%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +  R P+ + + +   CP  C  C         + T LS++D   A+         + V 
Sbjct: 85  LGRRVPEAVTMAVTQRCPCNCVHCSADRR----RPTELSTEDWHRAIRE-ALDLGTYNVT 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171
           FTGGDPL      L ++++ +  
Sbjct: 140 FTGGDPLFRED--LPELIQAVDD 160


>gi|331083857|ref|ZP_08332966.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 6_1_63FAA]
 gi|330403282|gb|EGG82842.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 6_1_63FAA]
          Length = 446

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 16/114 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------G 151
           LK+   C   C +C   ++ G+ +   +  +   +   Y+  +  + E+I         G
Sbjct: 149 LKIAEGCDKRCTYCIIPKLRGNYR--SIPMEQLISQAEYLAGQ-GVRELILVAQETTVYG 205

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            D  I   K L K+LK L  I  +Q +R         P+ I PELIQ +KE  K
Sbjct: 206 KD--IYGKKCLHKLLKELCKIPGIQWIRI----LYCYPEEIYPELIQTMKEEKK 253


>gi|291557494|emb|CBL34611.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Eubacterium siraeum V10Sc8a]
          Length = 480

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 17/141 (12%)

Query: 98  LLKLLHVCPVYCRFC-FRRE-------MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           L   +  CP  C +C F          ++G   G +L   D  A +   +   ++  V  
Sbjct: 160 LYVSIPFCPSRCSYCSFISASGEGALKLIGDYFGLLLKELDIYADIVK-RFSLKVDTVYI 218

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
            GG P  LS  +L +++  L     +  +R  +      P  I  + ++ LK  G + + 
Sbjct: 219 GGGTPTTLSASQLDRLIDKLGEFD-IANIREFT-AEAGRPDTITEDKLRALKNGGVRRIS 276

Query: 209 IAIHANHPYEFSEEAIAAISR 229
           I      P   ++  + A+ R
Sbjct: 277 IN-----PQSMNDSVLEAVGR 292


>gi|120554396|ref|YP_958747.1| radical SAM domain-containing protein [Marinobacter aquaeolei VT8]
 gi|120324245|gb|ABM18560.1| Radical SAM domain protein [Marinobacter aquaeolei VT8]
          Length = 298

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 41/170 (24%)

Query: 97  ILLKLLHVCPVY-CRFC---------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           ++L + + C    C FC         FR               D E A A   +   +  
Sbjct: 22  LILPVTNGCSWNQCTFCEMYTQPQKKFRARKPEDI------RADIEKAAAAFGD---VRR 72

Query: 147 VIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP---QRINPELIQCLKE 202
           V    GD ++L  +RL +++  L R    ++ +          P    + + E +  L+E
Sbjct: 73  VFLADGDAMVLPTRRLLEIIADLKRAFPGLERV-----SSYCLPRNLAKKSVEELAQLRE 127

Query: 203 AGKPVYIAIHANHPYEF--------SEE-AIAAISRLANAG----IILLS 239
           AG  +      +   E         + E   +A+ ++  AG    +++L+
Sbjct: 128 AGLKILYVGMESGDDEVLRRVNKGETWESTRSALVKIREAGLVSSVMVLN 177


>gi|325847827|ref|ZP_08170049.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
 gi|325480845|gb|EGC83898.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Anaerococcus hydrogenalis ACS-025-V-Sch4]
          Length = 166

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 9/90 (10%)

Query: 88  GIVHRYPD------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           G + +Y        R    +   C   C+ CF  E +    G + + K T+  ++Y+++ 
Sbjct: 4   GQIRKYDVANGPGIRTSFFVTG-CHANCKNCFNNEYMNPNFGNLWTEKQTQEVISYLKKD 62

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
            ++  +   GG+P   S + L K++K +R 
Sbjct: 63  -EVEGLTILGGEPFE-STEDLIKIVKKIRE 90


>gi|167720586|ref|ZP_02403822.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei DM98]
 gi|167739576|ref|ZP_02412350.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 14]
 gi|167816780|ref|ZP_02448460.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 91]
 gi|167825186|ref|ZP_02456657.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 9]
 gi|167846683|ref|ZP_02472191.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei B7210]
 gi|167895272|ref|ZP_02482674.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 7894]
 gi|167911906|ref|ZP_02498997.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei 112]
 gi|167919900|ref|ZP_02506991.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei BCC215]
 gi|254191222|ref|ZP_04897726.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei Pasteur 52237]
 gi|254195839|ref|ZP_04902265.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei S13]
 gi|157938894|gb|EDO94564.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei Pasteur 52237]
 gi|169652584|gb|EDS85277.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           pseudomallei S13]
          Length = 370

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R + G          +L+ ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99

Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
           PL+   K L+ +++ L  +  V
Sbjct: 100 PLL--RKNLEFLIERLANMTTV 119


>gi|283782364|ref|YP_003373119.1| radical SAM domain-containing protein [Pirellula staleyi DSM 6068]
 gi|283440817|gb|ADB19259.1| Radical SAM domain protein [Pirellula staleyi DSM 6068]
          Length = 518

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 32/170 (18%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPLI 156
           L+++   C + C  C+     G +  +V    D + A+  +       +V   +GG+P I
Sbjct: 102 LVEVTSSCNLTCPMCYASSAPGGKHTSV---DDCKLAIDRLVAVEGRADVCQLSGGEPTI 158

Query: 157 LSHKRLQKVLKTLRY--IKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                L+ ++       I +V I    +RF S          +P L++ +++  + + I 
Sbjct: 159 HP--ELETIVDYALAQPIDYVMINTNGIRFAS----------DPALVEFIRQRRERMEIY 206

Query: 211 IHANHPY-EFSEEAI---------AAISRLANAGIILLSQSVLLKGINDD 250
              +    E + +            A+  L  AGI +   + L  G+NDD
Sbjct: 207 FQLDGLNDEIALKLRGEKLLERKIKALDALEAAGIHVTLVATLQAGVNDD 256


>gi|254446971|ref|ZP_05060438.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium
           HTCC5015]
 gi|198263110|gb|EDY87388.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium
           HTCC5015]
          Length = 329

 Score = 42.4 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 38/92 (41%), Gaps = 4/92 (4%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R    + L +   C + CR+C              LS  +    +  +     + +V  T
Sbjct: 10  RKVTYVRLSVTDRCDLRCRYCMPEGFSDYHVPDHWLSVDEWLHLVGALAR-GGVQKVRIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           GG+PL+   + L ++++ +  I+ ++ +   +
Sbjct: 69  GGEPLL--RRELPELIEGISQIEGIEDIALST 98


>gi|154497024|ref|ZP_02035720.1| hypothetical protein BACCAP_01317 [Bacteroides capillosus ATCC
           29799]
 gi|150273423|gb|EDN00551.1| hypothetical protein BACCAP_01317 [Bacteroides capillosus ATCC
           29799]
          Length = 493

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 48/252 (19%), Positives = 81/252 (32%), Gaps = 82/252 (32%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS---------SKDTEAALAYIQEKS 142
           +  +  L   +  CP  C +C     V +  G  L           ++ EAA   ++   
Sbjct: 166 KEDEISLYVGIPFCPTRCAYCS---FVSADVGKALKLLPPYLEALFREVEAAGDLLKRLG 222

Query: 143 -QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI--VDPQRINPELIQC 199
             +  V   GG P  LS ++L  ++  +R   H+ + R  +   +    P  I  E +  
Sbjct: 223 LYVRTVYIGGGTPTTLSAEQLSALMGHIRT--HIDLSR-CTEYTVEAGRPDTITAEKLAA 279

Query: 200 LKEAG-KPVYIAIHANHPYEFSEEAIAAISR-------------LANAGIILLS------ 239
           LKE G   V +      P   S++ + A+ R             + N+GI  ++      
Sbjct: 280 LKENGADRVSVN-----PQSMSDKVLRAMGRSHTAADILRAYELVRNSGIPCVNMDLIAG 334

Query: 240 --------------Q---------SV----LLKG------------INDDPEILANLMRT 260
                         Q         +V    L KG              D  ++L     T
Sbjct: 335 LPEDSREGFRSTLDQVLSMDPANITVHTLALKKGSRLMTEGGSLPTAEDVADMLDYAWTT 394

Query: 261 FVELRIKPYYLH 272
                  PYYL+
Sbjct: 395 LRGAGYVPYYLY 406


>gi|145301230|ref|YP_001144070.1| radical SAM domain-containing protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142856007|gb|ABO92322.1| radical SAM domain protein [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 484

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 53/162 (32%), Gaps = 21/162 (12%)

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI----------LLKLLHVCPVYCR 110
           +P   EL    + +    G  +   L+ +  +Y  R           +  +   C   C 
Sbjct: 58  LPTDTELYQELKRKSFLAGSEDSYALRCLSAKYRQRKSFLSGGPGLHIFVITLRCGNSCE 117

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPLILSHKRLQKVLKTL 169
           +C       +     +S +    A+  + E       I F GG+PL+        ++K +
Sbjct: 118 YCQASRKSVTSSQHDMSQETARNAVDRVFESPNQRITIEFQGGEPLLAFD-----LIKFI 172

Query: 170 RYIKHVQILRFHSRVPIV----DPQRINPELIQCLKEAGKPV 207
               H +    H +  +       Q I  E++  +K     +
Sbjct: 173 VDYAHEKN-SVHGKSLVFVIATSLQYITDEMLDFIKLHSIQI 213


>gi|295402407|ref|ZP_06812361.1| Radical SAM domain protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112044|ref|YP_003990360.1| radical SAM protein [Geobacillus sp. Y4.1MC1]
 gi|294975570|gb|EFG51194.1| Radical SAM domain protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217145|gb|ADP75749.1| Radical SAM domain protein [Geobacillus sp. Y4.1MC1]
          Length = 373

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 67/180 (37%), Gaps = 24/180 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ +L   C + C  C R E    +    L+ ++ +  +  I E  Q   ++FTGGD
Sbjct: 8   PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKRLIDDIYEMEQPL-LVFTGGD 65

Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           PL+      L K       I   + LR  S  P   P  +  E I+  KE G   + A  
Sbjct: 66  PLMRPDVFELAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEIGLSRW-AFS 115

Query: 213 ANHPY-EFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
            + P  E  +              AI  L    I +   +V+ +      + +A L+   
Sbjct: 116 LDGPNAEIHDRFRGMPGSFDLTIKAIEYLHELDIPVQINTVISRYNVHALDEMAKLVEKL 175


>gi|148657495|ref|YP_001277700.1| radical SAM domain-containing protein [Roseiflexus sp. RS-1]
 gi|148569605|gb|ABQ91750.1| Radical SAM domain protein [Roseiflexus sp. RS-1]
          Length = 800

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 11/126 (8%)

Query: 90  VHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           +H  PDR++   + + + C + C  C+     G ++   +   D          +    +
Sbjct: 444 LHTPPDRLVNAYIHITYACNLTCAHCY--AEAGPRRREAMPVGDVLRLAEE-AARLGFQK 500

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           V+ TGG+PL+   +    +L+ L  +   ++  R   R  +  P  + P+LI  L  A  
Sbjct: 501 VVITGGEPLMHPQR--DALLEGLAALRPLLRPTRLALRTNLAYP--LTPKLIAALVHAAD 556

Query: 206 PVYIAI 211
            V +++
Sbjct: 557 QVIVSL 562


>gi|255658518|ref|ZP_05403927.1| radical SAM domain protein [Mitsuokella multacida DSM 20544]
 gi|260849318|gb|EEX69325.1| radical SAM domain protein [Mitsuokella multacida DSM 20544]
          Length = 332

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 14/105 (13%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159
             + C +YC  C+R    G +    L++++ +  L+ I + +    +IF+GG+PL+    
Sbjct: 8   TTNACNMYCAHCYRDA--GCRAEEELNTEEGKKLLSEIAK-AGFKIMIFSGGEPLMRPDI 64

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
             L K    L  I  V    F +   +     I  ++ + LKEAG
Sbjct: 65  LELVKYASDLHMIP-V----FGTNGTL-----ITLDMAKKLKEAG 99


>gi|15674141|ref|NP_268316.1| hypothetical protein L19128 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12725219|gb|AAK06257.1|AE006444_8 unknown protein [Lactococcus lactis subsp. lactis Il1403]
          Length = 707

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 70/184 (38%), Gaps = 28/184 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
             L + C + C+FC+    +   +G  L   +    L  I +  +  +V   GG+P    
Sbjct: 13  WMLTNKCNLRCKFCY----LEDYQGKELELDEINQVLD-IIQDKEFTQVSLLGGEP--TE 65

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHANHP 216
            +  + ++  L        LR  S     + Q++  N ELI+ L ++     + I    P
Sbjct: 66  CEYFEYIIIQLEK------LRI-SYSFSTNGQKLFRNEELIRILSKSKYLKEVQISLESP 118

Query: 217 YEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF--VEL 264
            +   +A+           +++ L    +      V+ K  N   + + ++  T    EL
Sbjct: 119 QKLINDAVRGKGTFESAIKSVALLVKENVPTRLAMVVTKENNSTIQQMIDMCATLGCREL 178

Query: 265 RIKP 268
           R+ P
Sbjct: 179 RLMP 182


>gi|330994803|ref|ZP_08318725.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp.
           SXCC-1]
 gi|329758064|gb|EGG74586.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp.
           SXCC-1]
          Length = 339

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 21/166 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C   +M    K  +LS  + E   A       +  +  TGG+PL+  
Sbjct: 19  VSVTDRCDMRCIYCMAEDMTFLPKAEILSLTELERLCAAFIRH-GVRRLRITGGEPLVRR 77

Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
                 + + + L        +  L   +        R+     + L+  G + + +++ 
Sbjct: 78  DVMAFFREMGQWLGRPGGQPGLDELTLTTNA-----SRL-AAFAEDLRACGVRRINVSLD 131

Query: 213 ANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGINDD 250
           +  P  F+              I     AG+ L   +V + G+NDD
Sbjct: 132 SLDPARFARITRRGNLSRTLDGIRAAREAGLALRINTVAMAGVNDD 177


>gi|291563253|emb|CBL42069.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [butyrate-producing
           bacterium SS3/4]
          Length = 476

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 59/130 (45%), Gaps = 15/130 (11%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           I  +YP +  + ++  C  +C +C    + G ++      +D    +  +     + EV+
Sbjct: 178 IERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--EDIIKEIEGLVAD-GVVEVM 234

Query: 149 FTGGDPLILSHKRLQ------KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
             G + +    K L+      ++L+ +  I+ ++ +RF +      P+ ++ ELI+ +K 
Sbjct: 235 LLGQN-VNSYGKNLEQPITFAELLRRVEKIEGLERIRFMTSH----PKDLSDELIETMKN 289

Query: 203 AGKPVYIAIH 212
           + K +   +H
Sbjct: 290 S-KKICSHLH 298


>gi|167563554|ref|ZP_02356470.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           oklahomensis EO147]
          Length = 370

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 31/189 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R + G          +L+ ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99

Query: 154 PLILSHKRLQKVLKTLRYIKHV----QILRFHSR-VPIVDPQ---------RINPELIQC 199
           PL+   K ++ +++ L  +  V      +   +    +V            R+   L   
Sbjct: 100 PLL--RKNIEFLIERLARMTTVAGRPLDITLTTNGSLLVRKAKSLRDAGLSRVTVSLDAL 157

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLM 258
                K +      N     S + +  I     AG   +    V+ +G ND    +  + 
Sbjct: 158 DDALFKRM------NDADFASADVLDGIFAAQAAGLAPVKVNMVVKRGTNDC--EIVPMA 209

Query: 259 RTFVELRIK 267
           R F    + 
Sbjct: 210 RRFKGTGVV 218


>gi|148243988|ref|YP_001220226.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Acidiphilium cryptum JF-5]
 gi|146400551|gb|ABQ29084.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Acidiphilium cryptum JF-5]
          Length = 235

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 63/164 (38%), Gaps = 37/164 (22%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGGDPLILSHKR 161
             CP+ CR+C     V  Q     S      AL ++ ++  + + V+F+GG+P +   + 
Sbjct: 31  RGCPLRCRYC---HNVDLQARRGTSPLRWLEALTWLDQRRGLLDSVVFSGGEPTM--DRC 85

Query: 162 LQKVLKTLRY--------------------IKHVQILRFHSRVPIVDPQRINPE------ 195
           L+++++ +R                     +  +Q +    + P  D  RI         
Sbjct: 86  LEQMIRDVRSLGFEVALHTAGVSPKRLERVLPMLQWVGLDIKAPFGDYARITGSEASGAR 145

Query: 196 ---LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS-RLANAGI 235
               +  L+E+G P  +     HP     + +  ++  L  +GI
Sbjct: 146 ARVALAMLRESGVPYEVRTTV-HPALLDAQVLQTLALDLRASGI 188


>gi|325971811|ref|YP_004248002.1| MiaB-like tRNA modifying enzyme [Spirochaeta sp. Buddy]
 gi|324027049|gb|ADY13808.1| MiaB-like tRNA modifying enzyme [Spirochaeta sp. Buddy]
          Length = 437

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 18/126 (14%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y  R  LK+   C   C +C R  +   +  ++ + +  E ALA   E S   E++ TG 
Sbjct: 142 YHSRAYLKIQDGCDNSCAYC-RVHIARGKAVSLQTEQVIERALA--LEASGFQEIMLTGV 198

Query: 153 DPLILSHKR-------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           + L +   +       L+K+L  L        +R   R+  ++P  I+  L+  L +   
Sbjct: 199 N-LTMYDHQGEGLGGLLEKLLAKLSS-----SVRI--RLSSMEPDHIDDRLLDVLTDRRM 250

Query: 206 PVYIAI 211
             +  I
Sbjct: 251 QPHFHI 256


>gi|322434558|ref|YP_004216770.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321162285|gb|ADW67990.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 359

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/214 (16%), Positives = 59/214 (27%), Gaps = 64/214 (29%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           +     C   CR+C+ R         + +         Y     +++E        LI  
Sbjct: 65  INPYRGCEFGCRYCYARY----THEFLAAKNRPADTPDY--RDPELFER-------LIFL 111

Query: 159 HKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQ-------RINPELIQCLKEA------- 203
            +    +L+  LR I   + +   +     DP        RI   L++            
Sbjct: 112 KENAAWLLEQELRKIDPAEEIALGT---ATDPYQPIERTARITRSLLEVFARKSGYRLGI 168

Query: 204 -------------------GKPVYIAIHANHP-----YEFSEEA------IAAISRLANA 233
                                 + +      P           A       AA+  L  A
Sbjct: 169 ISKSQLILRDIDLLSEISKRNTLVLHTTITTPDAKLARVLEPRAPRPDLRFAAVKALREA 228

Query: 234 GIIL--LSQSVLLKGINDDPEILANLMRTFVELR 265
           G+ +  L  S LL GI D+ + L  + R   E  
Sbjct: 229 GLTVGILC-SPLLPGITDNEKALDAMARRAAEAG 261


>gi|296446184|ref|ZP_06888132.1| MiaB-like tRNA modifying enzyme [Methylosinus trichosporium OB3b]
 gi|296256378|gb|EFH03457.1| MiaB-like tRNA modifying enzyme [Methylosinus trichosporium OB3b]
          Length = 400

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 46/148 (31%), Gaps = 25/148 (16%)

Query: 57  ARQFI-------PQKEELNILPEEREDP------------IGDNNHSPLKGIVHRYPDRI 97
           ARQ I       P  E +      R DP            +G+   +PL         R 
Sbjct: 48  ARQAIRRLHRERPSAEIVVAGCAARIDPASFATMAGVTRVLGEAQDAPLARSASEGQTRA 107

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--PL 155
            L + + C   C FC      G       +  D  A    +    +  E++ TG D    
Sbjct: 108 FLAVQNGCDHRCSFCVIP--FGRGPSRSAAPADVIAEARRLVAVGR-REIVLTGVDLTSY 164

Query: 156 ILSHKRLQKVLKT-LRYIKHVQILRFHS 182
                 L  + +  LR    ++ LR  S
Sbjct: 165 RHEDVTLGALAREILRATPQLERLRLSS 192


>gi|260587855|ref|ZP_05853768.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
 gi|260542120|gb|EEX22689.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583]
          Length = 446

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 16/114 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------G 151
           LK+   C   C +C   ++ G+ +   +  +   +   Y+  +  + E+I         G
Sbjct: 149 LKIAEGCDKRCTYCIIPKLRGNYR--SIPMEQLISQAEYLAGQ-GVRELILVAQETTVYG 205

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            D  I   K L K+LK L  I  +Q +R         P+ I PELIQ +KE  K
Sbjct: 206 KD--IYGKKCLHKLLKELCKIPGIQWIRI----LYCYPEEIYPELIQTMKEEKK 253


>gi|87198947|ref|YP_496204.1| GTP cyclohydrolase subunit MoaA [Novosphingobium aromaticivorans
           DSM 12444]
 gi|87134628|gb|ABD25370.1| GTP cyclohydrolase subunit MoaA [Novosphingobium aromaticivorans
           DSM 12444]
          Length = 339

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 34/170 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C    M    K  VLS ++     L +I     + ++  TGG+PL+ 
Sbjct: 25  LSVTDRCDLRCAYCMPERMEFLPKAEVLSLEELHRLSLHFIAR--GVRKIRLTGGEPLVR 82

Query: 158 SH--KRLQKVLKTLRY-IKHVQILRFHSRV--------------PIVDPQRINPELIQCL 200
                 ++ + + L   +  + +    +R+                V    ++ E    L
Sbjct: 83  RDMVDLVRALGRKLGDGLDELTMTTNGTRLAEFAGDLAAAGLRRINVSLDTLDREAFARL 142

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                            +   + +  I+    AG+ +   +V LKGIN+D
Sbjct: 143 SR--------------RDVLPQVLEGIAAAREAGLRVKINAVALKGINED 178


>gi|319787616|ref|YP_004147091.1| molybdenum cofactor biosynthesis protein A [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317466128|gb|ADV27860.1| molybdenum cofactor biosynthesis protein A [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 339

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154
           L ++  C   C +C   + V    GT  +S+      E  +    +   + ++  TGG+P
Sbjct: 24  LSVIDACNFRCGYCMPADRVPDDHGTSAASRMSFDQIETLVRGFVQ-VGVRKLRLTGGEP 82

Query: 155 LILSHKRLQKVLKTLRYIKHVQIL 178
           L+   + L +++  L  I  ++ L
Sbjct: 83  LL--RRNLPELIARLARIPGIEDL 104


>gi|26250136|ref|NP_756176.1| coproporphyrinogen III oxidase [Escherichia coli CFT073]
 gi|26110565|gb|AAN82750.1|AE016768_168 Putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli CFT073]
          Length = 445

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|20089140|ref|NP_615215.1| hypothetical protein MA0242 [Methanosarcina acetivorans C2A]
 gi|19914008|gb|AAM03695.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 373

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 11/113 (9%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQK-----GTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R  +++   CP  CR+C    + G +       +VL +      L +I            
Sbjct: 142 RAPIEISRGCPWGCRYCQTPRLFGREVRHRSIDSVLKNARYYDDLRFIASN-----AFAY 196

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G D +     +++K+L  L  +   +I  F +    V P+ +  E ++ +++ 
Sbjct: 197 GSDGIHPRFDKVEKLLSALHELPDKKIF-FGTFPSEVRPEFVTEESVELVRKY 248


>gi|253681883|ref|ZP_04862680.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
 gi|253561595|gb|EES91047.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
          Length = 444

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 39/176 (22%)

Query: 57  ARQFIPQKEELNILPEER--EDPIGDNNHSPLKGIVHRYPD-------RIL--------L 99
            +Q IP+ + +  + +    +D I +   +  K    +Y D       RIL        +
Sbjct: 90  LQQLIPEIDIMLGVNDYANIQDYIDEFFENKNKICKCKYSDVSINEGKRILTTDKHVAYI 149

Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTGGDP 154
           ++   C  +C +C   ++ G  +   + S     K+  A          + E+I  G D 
Sbjct: 150 RISEGCDNFCTYCIIPKIRGKYRSRSIDSIVKEAKELSAM--------GVKELILVGQDT 201

Query: 155 LIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            I      S  +L  +++ +  I+ ++ +R    V    P+ I  ELI+ +K   K
Sbjct: 202 AIYGRDIYSENKLPDLIRAISEIESIEWIR----VLYTYPEEITDELIEEIKNNDK 253


>gi|167772323|ref|ZP_02444376.1| hypothetical protein ANACOL_03700 [Anaerotruncus colihominis DSM
           17241]
 gi|167665426|gb|EDS09556.1| hypothetical protein ANACOL_03700 [Anaerotruncus colihominis DSM
           17241]
          Length = 434

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 36/164 (21%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +  L+   H C   C FCF  +M    + ++           Y ++       +F  G+ 
Sbjct: 76  ETYLMDRQHTCKNKCVFCFVDQMPPGMRDSL-----------YFKDDDSRMSFLF--GNY 122

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           + L++     +      I  +  +R     P+          ++        +    HA 
Sbjct: 123 ITLTN-----LTDA--DIDRIIKMRI---SPVNISVHTTDPALRV------QLMKNPHA- 165

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
                   ++  I RL  AGI + +Q VL  G+ND   +   L 
Sbjct: 166 ------AGSLRYIGRLTGAGIRVNAQLVLCPGLNDGAALERTLC 203


>gi|313682137|ref|YP_004059875.1| miab-like tRNA modifying enzyme [Sulfuricurvum kujiense DSM 16994]
 gi|313154997|gb|ADR33675.1| MiaB-like tRNA modifying enzyme [Sulfuricurvum kujiense DSM 16994]
          Length = 415

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 10/125 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C     V     ++  +K  E  +  +       E + TG +
Sbjct: 132 KSRAFIKIQEGCNFRCSYCII-PFVRGDARSMDEAKILEQ-IQRLASN-GFGEFVLTGTN 188

Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                    + + +++K +  I+ V+ +R  S    ++P +IN    + L E     ++ 
Sbjct: 189 VGSYGQGEGRNIAELMKKMSLIRGVRRIRVGS----LEPIQINESFREILSEPWLERHLH 244

Query: 211 IHANH 215
           I   H
Sbjct: 245 IAIQH 249


>gi|94499363|ref|ZP_01305901.1| Molybdenum cofactor biosynthesis enzyme [Oceanobacter sp. RED65]
 gi|94428995|gb|EAT13967.1| Molybdenum cofactor biosynthesis enzyme [Oceanobacter sp. RED65]
          Length = 330

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 21/180 (11%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + + +   C   C +C   +M    +  VLS +  E       E   +  +  TGG+PLI
Sbjct: 15  VRISVTDRCDFRCVYCMAEDMTFIPRKDVLSFEQIELISQAFVE-LGVTSIRLTGGEPLI 73

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANH 215
              K +  ++  L  +  +  +   +      PQ     L   LK+AG   + I++ +  
Sbjct: 74  --RKNIVDLVAKLNQLDGLNEITMTTNG-SQLPQ-----LAHGLKQAGLSRLNISLDSLK 125

Query: 216 PYEFSEEAIA--------AISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRI 266
           P  F E             I     AG   +   +V+L+G NDD   + +L++   +  I
Sbjct: 126 PERFKELTRTGDLQNVLVGIEAAKQAGFDRIKLNAVILRGRNDD--EILDLVKFVRDQGI 183


>gi|303237126|ref|ZP_07323696.1| MiaB-like protein [Prevotella disiens FB035-09AN]
 gi|302482513|gb|EFL45538.1| MiaB-like protein [Prevotella disiens FB035-09AN]
          Length = 452

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  +C +C      G  +   + S  +  E A      K    E++ TG
Sbjct: 159 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTIQSLVEQAEQA-----AKEGGKEIVLTG 213

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
              GD    + +    ++K L  ++ ++  R  S    ++P  I+ ELI+    +     
Sbjct: 214 VNIGDFGRTTSESFLDLVKALDQVEGIERFRISS----LEPDLIDDELIRYCATSR---A 266

Query: 209 IAIHA 213
              H 
Sbjct: 267 FMPHF 271


>gi|291519359|emb|CBK74580.1| SSU ribosomal protein S12P methylthiotransferase [Butyrivibrio
           fibrisolvens 16/4]
          Length = 442

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 14/113 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIFTGG 152
           LK+   C   C +C    + G  +   +  ++  +    +      +I     E    G 
Sbjct: 149 LKIAEGCNKRCTYCIIPYIRGDYR--SVPMEEILSEAKQLVADGVKEIILVAQETTVYGM 206

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           D  I + K L ++L  L  I  ++ +R         P+ I  ELI+C+    K
Sbjct: 207 D--IYNKKSLPELLNKLCEIDGLEWIRI----LYAYPEEITDELIECMASQPK 253


>gi|237732747|ref|ZP_04563228.1| radical SAM-superfamily protein [Mollicutes bacterium D7]
 gi|229384170|gb|EEO34261.1| radical SAM-superfamily protein [Coprobacillus sp. D7]
          Length = 402

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 65/164 (39%), Gaps = 34/164 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C  +C  C   + +         S+ + +  +A + ++  +  + FTGG+PL+ 
Sbjct: 102 IAVTDKCMYHCWHCSASKFMKDATSNSQFSTLELKKIIAQL-QRLGVAIIGFTGGEPLLR 160

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGK-PVYIAI-- 211
               L++++ ++             R          ++  +    LKEAG   + I++  
Sbjct: 161 ED--LEELIASIDE-----------RSVSYIFTTGYKLTYQRALALKEAGLFGIAISLDS 207

Query: 212 ----------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
                     H +H Y   + A+ AI     AG+  +SQ+V  +
Sbjct: 208 LDAQRHNGMRHNDHAY---DYAVEAIKNAKKAGLYTMSQTVCTR 248


>gi|168704786|ref|ZP_02737063.1| hypothetical protein GobsU_34937 [Gemmata obscuriglobus UQM 2246]
          Length = 467

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             LK+   C   C +C   +M G  K      ++       +     + E+I    D   
Sbjct: 169 AYLKVSEGCDRLCTYCAIPKMRG--KHVTKPIEEVIREARELAAD-GVRELIIVAQDTTY 225

Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                    RL ++L+ L  +++++ +R         P+ I+ ELI+    + K
Sbjct: 226 YGMDLYGRTRLAELLRELDKVENIEWIR----TLYAYPEHISDELIETFAGSKK 275


>gi|167756317|ref|ZP_02428444.1| hypothetical protein CLORAM_01850 [Clostridium ramosum DSM 1402]
 gi|167703725|gb|EDS18304.1| hypothetical protein CLORAM_01850 [Clostridium ramosum DSM 1402]
          Length = 366

 Score = 42.4 bits (99), Expect = 0.11,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 65/164 (39%), Gaps = 34/164 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C  +C  C   + +         S+ + +  +A + ++  +  + FTGG+PL+ 
Sbjct: 66  IAVTDKCMYHCWHCSASKFMKDATSNSQFSTLELKKIIAQL-QRLGVAIIGFTGGEPLLR 124

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGK-PVYIAI-- 211
               L++++ ++             R          ++  +    LKEAG   + I++  
Sbjct: 125 ED--LEELIASIDE-----------RSVSYIFTTGYKLTYQRALALKEAGLFGIAISLDS 171

Query: 212 ----------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245
                     H +H Y   + A+ AI     AG+  +SQ+V  +
Sbjct: 172 LDAQRHNGMRHNDHAY---DYAVEAIKNAKKAGLYTMSQTVCTR 212


>gi|301059325|ref|ZP_07200252.1| radical SAM domain protein [delta proteobacterium NaphS2]
 gi|300446554|gb|EFK10392.1| radical SAM domain protein [delta proteobacterium NaphS2]
          Length = 375

 Score = 42.4 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 71/187 (37%), Gaps = 25/187 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
           P  + L + + C + CR C       S   +V S   T+     I++  +  + E+  TG
Sbjct: 21  PKILTLMVTNGCNLACRHC--WPQSVSGTESVASPVSTKTLKEIIRQWSRLDLEEICLTG 78

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+PL        ++L+       V+ +   +   ++ P+  + E +  + +    V +++
Sbjct: 79  GEPLTHP--HWLEILRFACEQTEVKRVCLQTNATLLKPE--DCEELAGIGKREILVQVSL 134

Query: 212 HANHPYEFS--------EEAIAAISRLANAGIILLSQSVL----LKGINDDPEILANLMR 259
             N   E            A+  + RL  AG  L  ++V+     +    +   +  LM 
Sbjct: 135 EGNTEAEHDLVRGKGNFLAAVRGMERLVQAG--LGKRTVVALTETRH---NFPSIPRLME 189

Query: 260 TFVELRI 266
               + +
Sbjct: 190 RLSSMGV 196


>gi|266624276|ref|ZP_06117211.1| Fe-S oxidoreductase [Clostridium hathewayi DSM 13479]
 gi|288863884|gb|EFC96182.1| Fe-S oxidoreductase [Clostridium hathewayi DSM 13479]
          Length = 295

 Score = 42.4 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 7/75 (9%)

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
            +H      F+ +A+  I  L  AG+ +  Q VL KG+ND  E+   + R   +    PY
Sbjct: 2   MLH----NRFAGQALKRIDELYKAGVPMNGQIVLCKGLNDGVELERTI-RDLSK--YLPY 54

Query: 270 YLHHPDLAAGTSHFR 284
                 +  G S FR
Sbjct: 55  MESVSVVPVGLSKFR 69


>gi|325270230|ref|ZP_08136837.1| Fe-S oxidoreductase [Prevotella multiformis DSM 16608]
 gi|324987531|gb|EGC19507.1| Fe-S oxidoreductase [Prevotella multiformis DSM 16608]
          Length = 450

 Score = 42.4 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  +C +C      G  +   ++S     E A      +    E++ TG
Sbjct: 157 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTIASLVSQAEEA-----AREGGKEIVLTG 211

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
              GD    + +    ++K L  ++ ++  R  S    ++P  I+ +LI     +     
Sbjct: 212 VNIGDFGETTGESFLDLVKALDRVEGIRRFRISS----LEPDLIDDDLIAYCARSR---A 264

Query: 209 IAIHA 213
              H 
Sbjct: 265 FMPHF 269


>gi|261855784|ref|YP_003263067.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halothiobacillus
           neapolitanus c2]
 gi|261836253|gb|ACX96020.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halothiobacillus
           neapolitanus c2]
          Length = 482

 Score = 42.4 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 20/149 (13%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
              + ++  C  YC FC      G +        D  A +A + E+  + EV   G +  
Sbjct: 172 TAFVSIMEGCSKYCSFCVVPYTRGEEISRPF--DDVIAEVAELAEQ-GVREVNLLGQNVN 228

Query: 155 ---LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
               ++   +   L  +++ +  I  +  +RF +  P+         LI+  +   K + 
Sbjct: 229 AYRGVMHDGQIADLALLIEYIARIDSIGRIRFTTSHPV----EFTDRLIEAYRNVPK-LA 283

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIIL 237
             +H   P +   +    I  L   G  +
Sbjct: 284 AYLHL--PVQVGSD---RILALMKRGHTV 307


>gi|153853286|ref|ZP_01994695.1| hypothetical protein DORLON_00681 [Dorea longicatena DSM 13814]
 gi|149754072|gb|EDM64003.1| hypothetical protein DORLON_00681 [Dorea longicatena DSM 13814]
          Length = 440

 Score = 42.4 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 51/136 (37%), Gaps = 21/136 (15%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           P+ +       G  + Y     LK+   C  +C +C     V     +V   +  + A  
Sbjct: 131 PLPETKRLVTTGGHYAY-----LKIAEGCDKHCTYCII-PKVRGNYRSVPMERLIKEAQE 184

Query: 137 YIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
                  + E+I         G D  I   K L K+LK L  IK ++ +R         P
Sbjct: 185 --LADQGVKELILVAQETTVYGQD--IYGEKSLHKLLKELCQIKGIRWIRL----LYCYP 236

Query: 190 QRINPELIQCLKEAGK 205
           + I+  LIQ +KE  K
Sbjct: 237 EEIDDNLIQVMKEEPK 252


>gi|54301718|ref|YP_131711.1| hypothetical protein PBPRB0038 [Photobacterium profundum SS9]
 gi|46915138|emb|CAG21911.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 295

 Score = 42.4 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 31/165 (18%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSK--DTEAALAYI-QEKSQIWEVIFTGG 152
           ++L++ + C    C FC   +M           K  D E  L  I    +++  V    G
Sbjct: 19  LILQVTNGCSHNQCTFC---DMYTQPHKKFRPKKPDDIERELQQIVASGTRVHRVFLADG 75

Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILRFHS----RVPIVDPQRINPELIQCLKEAGKPV 207
           D + L   RLQ +   +   +  VQ  R  S    R           E +  L++ G  +
Sbjct: 76  DAMTLPFARLQHICSLINQYLPDVQ--RISSYCLPRNLTNK----TEEQLAELRQLGLSL 129

Query: 208 YIAIHANHPYEFSEEAIA---------AISRLANAG----IILLS 239
                 +   E   +            A+ +L  AG    +++L+
Sbjct: 130 LYVGCESGDDEVLAKVQKGETFESSLIALKKLKAAGMKSSVMILN 174


>gi|15669680|ref|NP_248493.1| hypothetical protein MJ_1487 [Methanocaldococcus jannaschii DSM
           2661]
 gi|38258708|sp|Q58882|Y1487_METJA RecName: Full=Uncharacterized methyltransferase MJ1487
 gi|1592124|gb|AAB99497.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 426

 Score = 42.4 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 39/240 (16%), Positives = 88/240 (36%), Gaps = 53/240 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPL- 155
           +++   CP  C FC    + G      +  +D E    Y  I  +  + ++ F   +   
Sbjct: 177 IEITRGCPYKCYFCQTPRIFG----KKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFG 232

Query: 156 -------ILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEA--GK 205
                   L+  +++K+L+++R I  +   + F +    V P+ +N E +  +      K
Sbjct: 233 YGSKDGKTLNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNK 292

Query: 206 PVYIAI-----------HANHPYEFSEEAIAAISRLANAGIILLSQSV-LLKGI----ND 249
            + I             H  H  E   +   A+     AG+ +    V  + G+     +
Sbjct: 293 NLVIGAQSGSEKVLELCHRGHTVE---DVYNAVRVARKAGLGVD---VDFIFGLPGETEE 346

Query: 250 DPEILANLMRTFVELRIKPY-YLHHPDLAAGTSHFRLTIEEG------QKIVASLKEKIS 302
           D E    +M+  +++  K + +   P         +    +       +KI+ +++ +I 
Sbjct: 347 DVEKTIKVMKDLIKMGAKIHAHTFMPLP-------QTPFAKANPGKVDKKIIRAMRYEIP 399


>gi|67527057|gb|AAY68326.1| putative molybdenum cofactor biosynthesis enzyme [uncultured marine
           bacterium 66A03]
          Length = 334

 Score = 42.4 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 46/193 (23%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           D + + +   C   C +C   +M    K  +L+ ++         E     ++  TGG+P
Sbjct: 15  DYVRISVTDRCDFRCVYCMSEQMTFLPKKDLLTLEEIAIVCDSFIELGT-KKIRLTGGEP 73

Query: 155 LILSHKRLQKVLKTLRYIKHVQI-----LRFHS-----------------RVPIVDPQRI 192
           L+   + +  ++K L    HV+      +   +                 R   V    +
Sbjct: 74  LV--RRNIMHLIKHLGT--HVKKGKLEEITITTNGSQLQKFSDLLLEAGVRRINVSIDTL 129

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
           +PE  + +   GK               +  +  +     AG+ +   +V LKGINDD  
Sbjct: 130 DPEKFERITRWGK--------------LDVVLNGLDAAKKAGLKIKLNTVALKGINDD-- 173

Query: 253 ILANLMRTFVELR 265
               L        
Sbjct: 174 ---ELSTMLNWAG 183


>gi|78358583|ref|YP_390032.1| Elongator protein 3/MiaB/NifB [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78220988|gb|ABB40337.1| Elongator protein 3/MiaB/NifB [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 464

 Score = 42.4 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 48/240 (20%), Positives = 82/240 (34%), Gaps = 44/240 (18%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
            +L ++   C ++CRFCF     G               +   + ++    V  +GG+P 
Sbjct: 94  TLLFEITSRCNLHCRFCFASA--GKSAPPDPDMAALRTLMDNARPRTGPCNVQLSGGEP- 150

Query: 156 ILSHKRLQKVLKTL-RYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEA-GKPVYI 209
            +    L +++         VQ+    LR   R P +  Q     L     +  G    I
Sbjct: 151 TMRDD-LPQIIGMAKERFPFVQLNTNGLRIA-REPSLAAQLARAGLDSVFLQFDGTQDAI 208

Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD-PEILANLMRTFVEL--R 265
              A        E + A+  L+ AGI I+L  +V+  G+NDD    +  L          
Sbjct: 209 YT-ALRGMPLLREKMEAVRLLSEAGIGIVLVPTVV-PGVNDDNIGEILRLGAALCPAVRG 266

Query: 266 IKPYYLHHPDLAAGTSHF-RLTIEEGQ-----------------KIVASLKEKISGLCQP 307
           +       P      SHF R    +G                  +I+  L+++ +GL   
Sbjct: 267 VH----FQP-----VSHFGRHPAPDGATRAPEQGPPPAERITLPEIMRGLEKQTAGLVTT 317


>gi|261855208|ref|YP_003262491.1| molybdenum cofactor biosynthesis protein A [Halothiobacillus
           neapolitanus c2]
 gi|261835677|gb|ACX95444.1| molybdenum cofactor biosynthesis protein A [Halothiobacillus
           neapolitanus c2]
          Length = 328

 Score = 42.4 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 68/175 (38%), Gaps = 32/175 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C        +     L++ + E  L  + E   +  V  TGG+PL+ 
Sbjct: 17  LSVTDRCDLRCFYCMPEGFNDFEVPEHWLTADEIERLLGVMAEM-GLRRVRITGGEPLV- 74

Query: 158 SHKRLQKVLKTLRYIKHVQILRF---HSRV-PIVDP------QRINPELIQCLKEAGKPV 207
             + ++ +++ +  +  ++ +      +R+  +  P       RIN  L     +  K  
Sbjct: 75  -RRGIEDIVRRIDALPGIRDIALSTNATRLGKMAAPLKAAGVDRINVSLDTLDADRFKQ- 132

Query: 208 YIAIHANHPYEFSE----EAIAAISRLANAGI-ILLSQSVLLKGIN-DDPEILAN 256
                       ++    + I  +    +AG+  +    V++KG+N DD E +  
Sbjct: 133 -----------ITQGKLSKVIDGLMAAKDAGLSPIKLNMVVMKGVNEDDVESVLE 176


>gi|225572114|ref|ZP_03780978.1| hypothetical protein RUMHYD_00408 [Blautia hydrogenotrophica DSM
           10507]
 gi|225040448|gb|EEG50694.1| hypothetical protein RUMHYD_00408 [Blautia hydrogenotrophica DSM
           10507]
          Length = 488

 Score = 42.4 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 67/157 (42%), Gaps = 24/157 (15%)

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
            + + I   E  D I +    P      +YP +  + ++  C  +C +C    + G ++ 
Sbjct: 171 SDRMIIDIWEGTDQIVE--DLPTD---RKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERS 225

Query: 124 TVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHV 175
               +  ++ E  +A       + EV+  G + +    K L +      +L+ +  ++ +
Sbjct: 226 REPKAIIREIEKLVA-----DGVREVMLLGQN-VNSYGKTLDEPVSFARLLEEVEQVEGL 279

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           + +RF +      P+ ++ ELIQ + ++ K +   +H
Sbjct: 280 ERIRFMTSH----PKDLSDELIQVMAKSQK-ICRHLH 311


>gi|91773247|ref|YP_565939.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM
           6242]
 gi|91712262|gb|ABE52189.1| FeMo cofactor biosynthesis protein nifB [Methanococcoides burtonii
           DSM 6242]
          Length = 312

 Score = 42.4 bits (99), Expect = 0.12,   Method: Composition-based stats.
 Identities = 39/212 (18%), Positives = 72/212 (33%), Gaps = 35/212 (16%)

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRR------EMVGSQKGTVLSSKDTEAALAYIQE 140
           K   H++  RI L +   C + C +C R+         G     +   +  E     +++
Sbjct: 33  KNAQHKF-GRIHLAVAPKCNIQCNYCDRKFDCVNESRPGVTSEILTPQEALEKTRQVLKD 91

Query: 141 KSQIWEVIFTG-GDPLIL--SHKRLQKVLKTLRYI-------------KHVQILRFHSRV 184
              I  V   G GDPL    + + L+ +      +             K  ++LR     
Sbjct: 92  HPFIKVVAVAGPGDPLANDETFETLELIKNEFPDVTLCLSTNGLALPDKMDELLRVGVST 151

Query: 185 PIV-----DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
             V     DP +I  +++  +   GK                  +  I +   AG+++  
Sbjct: 152 LTVTLNAIDP-KIQAQIVDHISYKGKSY---TGVEAAEILIANQLEGIKKAVEAGMVIKV 207

Query: 240 QSVLLKGINDD--PEILANLMR-TFVELRIKP 268
            +VL+  IN D   E+   +       + I P
Sbjct: 208 NTVLIPEINKDHIVEVAKKIREMGVFIMNIMP 239


>gi|262277765|ref|ZP_06055558.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
           HIMB114]
 gi|262224868|gb|EEY75327.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
           HIMB114]
          Length = 435

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 13/111 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD--P 154
           + +   C  +C+FC     V         S+D    L  I     +   E++  G +   
Sbjct: 153 VTIQEGCDKFCKFC-----VVPYTRGPEFSRDHNKILDEILSLTDNGTKEIVLLGQNVSA 207

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
              +   L +++K +  I +V+ +RF +  P       + ELI    E  K
Sbjct: 208 YKNNDISLARLIKKIAKINNVKRIRFTTSHPND----FDQELISLFGEEPK 254


>gi|258406363|ref|YP_003199105.1| ribosomal RNA large subunit methyltransferase N [Desulfohalobium
           retbaense DSM 5692]
 gi|257798590|gb|ACV69527.1| radical SAM enzyme, Cfr family [Desulfohalobium retbaense DSM 5692]
          Length = 359

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 54/298 (18%), Positives = 98/298 (32%), Gaps = 78/298 (26%)

Query: 11  AQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69
           A+ ++    IK     +++  +S     AL+ V            PIA   +P   E++ 
Sbjct: 28  AEQIWQWLWIKGATSFEDMTNVSKSLRSALSQVF-----------PIA---LPTVAEVHT 73

Query: 70  LPEEREDPIGDNNHSPL------KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
             +     + + +   +       G  H       L     C + C FC        Q G
Sbjct: 74  SADGTRKFLLNLHDGHVLETVLIPGGEHF---TQCLSTQVGCNLGCTFCS-----TGQMG 125

Query: 124 TVLSSKDTEAALAYIQEKSQIWE----------VIFTGGDPLILSHKRLQKVLKTLRYIK 173
              +    E A   I  ++ +W+          V    G+PL L+ + +   L  L    
Sbjct: 126 LTRNLSAAEIAGQVIVARNHLWQTGTGMRLRNLVFMGMGEPL-LNWENVDNALDRL---- 180

Query: 174 HVQILRFHSRVPIVDPQRIN------PELIQCLKEAGK-PVYIAIHANHPYE-----FSE 221
                  H+      P+R+       P  +  L  + K  + +++HA  P +        
Sbjct: 181 ------IHASAMNFSPRRVTVSTVGVPGTLDALGHSHKASLAVSLHA--PNQELREKIMP 232

Query: 222 EAIAAI------SRLA------NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
            A   +      +RL          + +    VLL G+ND  +    L+R    +R K
Sbjct: 233 RAARMLPLPDLLARLRSYPMAPRQRVTIE--YVLLGGVNDSLDQARQLVRCLNGIRCK 288


>gi|170290655|ref|YP_001737471.1| molybdenum cofactor biosynthesis protein A [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170174735|gb|ACB07788.1| molybdenum cofactor biosynthesis protein A [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 310

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 7/74 (9%)

Query: 99  LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + + + C   C FC R    V  ++   +  ++    +  + +   +  V  TGG+PL+ 
Sbjct: 15  ISVTNSCNYNCFFCHREGHYVRGEE---MRPEEIGRLMRVLSKH-GVKRVKLTGGEPLMR 70

Query: 158 SHKRLQKVLKTLRY 171
               L++++  L+ 
Sbjct: 71  RD--LEEIVSELKS 82


>gi|110643748|ref|YP_671478.1| coproporphyrinogen III oxidase [Escherichia coli 536]
 gi|227883662|ref|ZP_04001467.1| coproporphyrinogen III oxidase [Escherichia coli 83972]
 gi|300985061|ref|ZP_07177267.1| radical SAM domain protein [Escherichia coli MS 45-1]
 gi|300987452|ref|ZP_07178220.1| radical SAM domain protein [Escherichia coli MS 200-1]
 gi|301050257|ref|ZP_07197148.1| radical SAM domain protein [Escherichia coli MS 185-1]
 gi|110345340|gb|ABG71577.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli 536]
 gi|222035213|emb|CAP77958.1| oxygen independent coproporphyrinogen III oxidase [Escherichia coli
           LF82]
 gi|227839541|gb|EEJ50007.1| coproporphyrinogen III oxidase [Escherichia coli 83972]
 gi|300298029|gb|EFJ54414.1| radical SAM domain protein [Escherichia coli MS 185-1]
 gi|300306144|gb|EFJ60664.1| radical SAM domain protein [Escherichia coli MS 200-1]
 gi|300408221|gb|EFJ91759.1| radical SAM domain protein [Escherichia coli MS 45-1]
 gi|307555606|gb|ADN48381.1| putative coproporphyrinogen III oxidase [Escherichia coli ABU
           83972]
 gi|312948061|gb|ADR28888.1| coproporphyrinogen III oxidase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315291787|gb|EFU51141.1| radical SAM domain protein [Escherichia coli MS 153-1]
 gi|315296048|gb|EFU55357.1| radical SAM domain protein [Escherichia coli MS 16-3]
 gi|324014495|gb|EGB83714.1| radical SAM domain protein [Escherichia coli MS 60-1]
          Length = 445

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|116749338|ref|YP_846025.1| molybdenum cofactor biosynthesis protein A [Syntrophobacter
           fumaroxidans MPOB]
 gi|116698402|gb|ABK17590.1| GTP cyclohydrolase subunit MoaA [Syntrophobacter fumaroxidans MPOB]
          Length = 329

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 68/192 (35%), Gaps = 30/192 (15%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C     +     G +L  ++    LA I     I ++  TGG+PL+ 
Sbjct: 18  LSITDRCNLRCTYCMPEGGVPKLAHGDILRYEEILR-LARIVTAMGISKIRITGGEPLVR 76

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS------RVPIVDPQ----RINPELIQCLKEAGKPV 207
                  +  ++  I  ++ L   +      R+     Q    RIN  L   LK      
Sbjct: 77  RDVLF--LCGSIAGIPQLRSLSITTNGVLLGRLAGGLFQAGIKRINVSL-DTLKPGRFAS 133

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRI 266
                     +  EE    I     AG   +   +V+++G+NDD   +A+L R   E   
Sbjct: 134 I------TRQDCFEEVWKGIMAAHEAGFAPIKLNAVVMRGVNDD--EIADLARLTFE--- 182

Query: 267 KPYYLHHPDLAA 278
              Y  H     
Sbjct: 183 ---YPFHMRFIE 191


>gi|323141762|ref|ZP_08076632.1| putative FeS-containing Cyanobacterial-specific oxidoreductase
           [Phascolarctobacterium sp. YIT 12067]
 gi|322413751|gb|EFY04600.1| putative FeS-containing Cyanobacterial-specific oxidoreductase
           [Phascolarctobacterium sp. YIT 12067]
          Length = 427

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 61/188 (32%)

Query: 90  VHRYPD--------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           + +YPD          +   +  C   C FCF  +M+   +  +           Y+++ 
Sbjct: 64  IEKYPDEDLGLEFDSAVFDRVATCYNNCVFCFVDQMIPGMRPGL-----------YVRDD 112

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
                              RL  +      + +++                + +  + ++
Sbjct: 113 -----------------DYRLSFLYGNFITLTNMK----------------DEDFERIIR 139

Query: 202 EAGKPVYIAIHANHP--------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
               P+Y+++HA  P          F+ + +  +  L +AGI + +Q V   G ND  EI
Sbjct: 140 THLTPLYVSVHATDPQVRCQMMHNRFAGQLMERLQLLFDAGIQVHTQIVCCPGYND-GEI 198

Query: 254 LANLMRTF 261
           LA      
Sbjct: 199 LAKSFHDL 206


>gi|302872012|ref|YP_003840648.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
 gi|302574871|gb|ADL42662.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47]
          Length = 341

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 15/135 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +    + CP  C FC ++ + G ++   L    +  E  L  I     + E+ + GG+  
Sbjct: 8   IFIPQYACPFNCIFCNQKIISGEKEEVSLDRIKRQIEQGLK-INSDEHV-ELAYYGGNFT 65

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
            +     +K+L+     K ++ +R  +R     P  I+ E ++ LK    K + + I   
Sbjct: 66  AIDIDFQKKLLELANSFKKIKSIRISTR-----PDCIDEERLRFLKLYNVKTIELGI--- 117

Query: 215 HPYEFSEEAIAAISR 229
                 ++ + A +R
Sbjct: 118 --QSMFDDVLNACAR 130


>gi|256842238|ref|ZP_05547742.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parabacteroides sp. D13]
 gi|301308989|ref|ZP_07214934.1| Fe-S oxidoreductase [Bacteroides sp. 20_3]
 gi|256736122|gb|EEU49452.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parabacteroides sp. D13]
 gi|300833015|gb|EFK63640.1| Fe-S oxidoreductase [Bacteroides sp. 20_3]
          Length = 444

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 11/123 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  YC +C      G  +   ++S   E A      +    E++ TG  
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQE--VARKGGKEIVLTGVN 205

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    +++ L  ++ +   R  S    ++P  I  E I       K     
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVEGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260

Query: 211 IHA 213
            H 
Sbjct: 261 FHI 263


>gi|229198890|ref|ZP_04325581.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293]
 gi|228584593|gb|EEK42720.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293]
          Length = 339

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDIFKAINGRNINTKPVIKGIIAAKEAGLDVKVNMVVKKGMNDH 177


>gi|28211649|ref|NP_782593.1| Fe-S oxidoreductase [Clostridium tetani E88]
 gi|28204091|gb|AAO36530.1| Fe-S oxidoreductase [Clostridium tetani E88]
          Length = 433

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 15/125 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C           +    K  E     ++      EV  +G  
Sbjct: 141 KTRAFLKIQDGCNSFCSYCLI-PFARGGICSKEPKKVIEEIKKLVEH--GFKEVTLSGIQ 197

Query: 154 -PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
             L  +  +    L  +L+ +  I+ ++ +R  S    + P+    ++I       K   
Sbjct: 198 ISLYGNDFQDNWDLITLLEEIDKIEGIERVRIGS----ISPKYFKDDIIDRFSNLKK--- 250

Query: 209 IAIHA 213
           +  H 
Sbjct: 251 LCPHF 255


>gi|331685157|ref|ZP_08385743.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli H299]
 gi|331077528|gb|EGI48740.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli H299]
          Length = 445

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|212704755|ref|ZP_03312883.1| hypothetical protein DESPIG_02819 [Desulfovibrio piger ATCC 29098]
 gi|212671818|gb|EEB32301.1| hypothetical protein DESPIG_02819 [Desulfovibrio piger ATCC 29098]
          Length = 399

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 66/182 (36%), Gaps = 34/182 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
            ++   C + C+ C          G   S+++ +A +       Q+    +IFTGGDP++
Sbjct: 57  WEVTRSCNLACKHCRAEAHPEPYPGE-FSTEEAKALIDTF---PQVGNPIIIFTGGDPMM 112

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG-KPVYIAIH- 212
                    +  L    H + L          P    I PEL + +KEAG     I+I  
Sbjct: 113 RPD------VYELVAYAHNKGLTC-----AFSPNGTLITPELARKIKEAGVNRCSISIDG 161

Query: 213 ---ANHPYEFSE------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
              A+H  EF         ++  I  L  AG+     + + +   ++     ++      
Sbjct: 162 ADAASH-DEFRGVPGAFDASMRGIEYLKQAGVPFQINTTVTR---NNLHSFKDIFNLCER 217

Query: 264 LR 265
           + 
Sbjct: 218 IG 219


>gi|296332403|ref|ZP_06874864.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305673684|ref|YP_003865356.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296150321|gb|EFG91209.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           ATCC 6633]
 gi|305411928|gb|ADM37047.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii
           str. W23]
          Length = 501

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 15/161 (9%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
           I D   + +  +     +  +   +  CP  C +C         +   + S         
Sbjct: 153 IVDRQLAAVPDLYQVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 212

Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
           +    +++E   ++  + F GG P  ++ + +  + + + R    V+ +R  + V    P
Sbjct: 213 QKIGEWLKEHDVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREIT-VEAGRP 271

Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
             I  E +  L +     + I      P  +  E + AI R
Sbjct: 272 DTITEEKLAVLNKYDIDRISIN-----PQSYENETLKAIGR 307


>gi|212697105|ref|ZP_03305233.1| hypothetical protein ANHYDRO_01670 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675880|gb|EEB35487.1| hypothetical protein ANHYDRO_01670 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 432

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 20/120 (16%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT-- 150
            R  +K+   C +YC +C             ++S+D  + +   +    +   E++ T  
Sbjct: 142 TRSYIKIQDGCNMYCSYCLI-----PYARGNIASRDLVSIIDEAKRLRDNGFKEIVLTGI 196

Query: 151 -----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                G D L L+   +  V++ +  I  ++ +R  S    ++P+ I+ E +Q +K+  K
Sbjct: 197 HVASYGKD-LDLNISLID-VIEHIAKIDGIERIRLSS----MEPRHIDREFLQRMKDTKK 250


>gi|116670001|ref|YP_830934.1| molybdenum cofactor biosynthesis protein A [Arthrobacter sp. FB24]
 gi|116610110|gb|ABK02834.1| GTP cyclohydrolase subunit MoaA [Arthrobacter sp. FB24]
          Length = 347

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 34/182 (18%)

Query: 88  GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           G++ RY  R     L L   C + C +C   E +    K  V+S+++    +    +   
Sbjct: 4   GLMDRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLAKQAVMSAEEIVRIVRIGVDMLG 63

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELI 197
           + E+  TGG+PL+ +   L  ++  LR          H  +PI     +        +  
Sbjct: 64  VRELRLTGGEPLVRAD--LLDIISALRQA--------HPELPIS----MTTNAVGLDKKA 109

Query: 198 QCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGI 247
             LK AG   + +++ + H   F++           AG+          +   +VL++GI
Sbjct: 110 AGLKAAGLSRINVSLDSLHEETFTKLTRRPFLDKVLAGVDAAWAAGLGPVKLNAVLMRGI 169

Query: 248 ND 249
           ND
Sbjct: 170 ND 171


>gi|294784572|ref|ZP_06749861.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
 gi|294487788|gb|EFG35147.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_27]
          Length = 348

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
           ++ +  +      CP  C FC ++++ G +    +S  D +  +  Y++      I +V 
Sbjct: 2   KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59

Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG         L ++ L+ ++  I +  V+ +R  +R     P+ I+ E++  LK+ G
Sbjct: 60  FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113

Query: 205 KPVY 208
               
Sbjct: 114 VKTI 117


>gi|260496870|ref|ZP_05815990.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium sp.
           3_1_33]
 gi|260196612|gb|EEW94139.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium sp.
           3_1_33]
          Length = 348

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
           ++ +  +      CP  C FC ++++ G +    +S  D +  +  Y++      I +V 
Sbjct: 2   KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59

Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG         L ++ L+ ++  I +  V+ +R  +R     P+ I+ E++  LK+ G
Sbjct: 60  FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113

Query: 205 KPVY 208
               
Sbjct: 114 VKTI 117


>gi|256027059|ref|ZP_05440893.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289765043|ref|ZP_06524421.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
 gi|289716598|gb|EFD80610.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D11]
          Length = 348

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
           ++ +  +      CP  C FC ++++ G +    +S  D +  +  Y++      I +V 
Sbjct: 2   KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59

Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG         L ++ L+ ++  I +  V+ +R  +R     P+ I+ E++  LK+ G
Sbjct: 60  FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113

Query: 205 KPVY 208
               
Sbjct: 114 VKTI 117


>gi|237743503|ref|ZP_04573984.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
 gi|229433282|gb|EEO43494.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 7_1]
          Length = 348

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
           ++ +  +      CP  C FC ++++ G +    +S  D +  +  Y++      I +V 
Sbjct: 2   KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59

Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG         L ++ L+ ++  I +  V+ +R  +R     P+ I+ E++  LK+ G
Sbjct: 60  FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113

Query: 205 KPVY 208
               
Sbjct: 114 VKTI 117


>gi|19703498|ref|NP_603060.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19713586|gb|AAL94359.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 348

 Score = 42.0 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
           ++ +  +      CP  C FC ++++ G +    +S  D +  +  Y++      I +V 
Sbjct: 2   KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59

Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG         L ++ L+ ++  I +  V+ +R  +R     P+ I+ E++  LK+ G
Sbjct: 60  FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113

Query: 205 KPVY 208
               
Sbjct: 114 VKTI 117


>gi|319650177|ref|ZP_08004324.1| HemZ protein [Bacillus sp. 2_A_57_CT2]
 gi|317398109|gb|EFV78800.1| HemZ protein [Bacillus sp. 2_A_57_CT2]
          Length = 504

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 66/161 (40%), Gaps = 15/161 (9%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDT 131
           I D   + +  + +   +  +   +  CP  C +C F    +  ++G+V S       + 
Sbjct: 155 IVDRQLAVVPDLYNLKNEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVNSFLGGLHFEM 214

Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDP 189
                +++E   +I  V + GG P  ++ + +  + + +      V+ +R  + V    P
Sbjct: 215 RKIGEWLKENDVKITTVYYGGGTPTSITAEEMDMLYEEMYDSFPDVENIREVT-VEAGRP 273

Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
             I PE ++ LK+     + I      P  + +E + AI R
Sbjct: 274 DTITPEKLEVLKKWNIDRISIN-----PQSYIQETLKAIGR 309


>gi|229032383|ref|ZP_04188354.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
 gi|228728946|gb|EEL79951.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271]
          Length = 339

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I+ +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIARLVKIEGLVDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                     N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177


>gi|120601413|ref|YP_965813.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|120561642|gb|ABM27386.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4]
          Length = 327

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 11/96 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI------QEKSQIWEV 147
           P  + L+L + C + C FC    M G+ +   +  +  +A +  +      +   +I  V
Sbjct: 7   PRVVNLELTNRCDMGCVFCDHAAMRGTMRMGDMPPERLDAIVDQLLDALAGRRLPEIGMV 66

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHS 182
               G+P++  ++ L+  L +L  I  H   + F+S
Sbjct: 67  GL--GEPML--NRHLETHLASLARIAPHCDRVTFNS 98


>gi|134295140|ref|YP_001118875.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           vietnamiensis G4]
 gi|134138297|gb|ABO54040.1| GTP cyclohydrolase subunit MoaA [Burkholderia vietnamiensis G4]
          Length = 370

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%)

Query: 77  PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
           P+ D +  P + G+ H  PD  L            + +   C   C +C     F ++  
Sbjct: 7   PLADVSAMPDISGVAHT-PDGALTDRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKDYP 65

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
                 +L+ ++ E           + ++  TGG+PL+   K L+ +++ L  +
Sbjct: 66  FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116


>gi|297529334|ref|YP_003670609.1| RNA modification enzyme, MiaB family [Geobacillus sp. C56-T3]
 gi|297252586|gb|ADI26032.1| RNA modification enzyme, MiaB family [Geobacillus sp. C56-T3]
          Length = 449

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C FC      G  + +    +    A   +       E++ T   
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPQEIIRQARQLVAA--GYKEIVLTGIH 198

Query: 151 ----GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D   L       +L+ L   +  ++ LR  S    ++  +I  E+I  LK + K
Sbjct: 199 TGGYGTD---LKDYNFASLLRDLDEQVPGLRRLRISS----IEASQITDEVIDVLKRSEK 251

Query: 206 PVYIAIHA 213
            +   +H 
Sbjct: 252 -IVRHLHI 258


>gi|289191984|ref|YP_003457925.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
 gi|288938434|gb|ADC69189.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
          Length = 426

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 38/242 (15%), Positives = 85/242 (35%), Gaps = 57/242 (23%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPL- 155
           +++   CP  C FC    + G      +  +  E    Y  I  +  + ++ F   +   
Sbjct: 177 IEITRGCPYGCYFCQTPRIFGKN----VRHRSIENICKYVEIMAERNLKDIRFITPNAFG 232

Query: 156 -------ILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                   L+  +++K+L+ +R I  +   + F +    V P+ +N E +  + +     
Sbjct: 233 YGSKDGKTLNIDKVEKLLENIREILGNNGRIFFGTFPSEVRPEHVNDETVDLILKYADNK 292

Query: 208 YIAI-------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI------- 247
            + +             H  H  E   +   A++     GI     SV L  I       
Sbjct: 293 SLVVGAQSGSQRILDLCHRGHTVE---DIYNAVTTAIKKGI-----SVSLDFIFGLPGET 344

Query: 248 NDDPEILANLMRTFVELRIKPY-YLHHPDLAAGTSHFRLTIEEG------QKIVASLKEK 300
            +D E    +M+  +++  K + +   P         +    +       +KI+ +++ +
Sbjct: 345 EEDVEKTIKVMKDLIKMGAKIHAHTFMPLP-------QTPFAKANPGVVNKKIIRAMRHE 397

Query: 301 IS 302
           I 
Sbjct: 398 IP 399


>gi|229076235|ref|ZP_04209202.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock4-18]
 gi|228706884|gb|EEL59090.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock4-18]
          Length = 339

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIARLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177


>gi|229578332|ref|YP_002836730.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14]
 gi|228009046|gb|ACP44808.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14]
          Length = 394

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 8/120 (6%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           + +  +P+   L  + EE      ++    +   + +      L L + C   C +CF++
Sbjct: 33  LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
              G +K   +S K     + YI++  +  +V  T  GG+PL L  ++++++ + L  +K
Sbjct: 91  ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146


>gi|226324718|ref|ZP_03800236.1| hypothetical protein COPCOM_02504 [Coprococcus comes ATCC 27758]
 gi|225207166|gb|EEG89520.1| hypothetical protein COPCOM_02504 [Coprococcus comes ATCC 27758]
          Length = 446

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 58/153 (37%), Gaps = 24/153 (15%)

Query: 67  LNILPEERED---PIGDNNHSPLKGIVHRYPDR----ILLKLLHVCPVYCRFCFRREMVG 119
           L+  P ER D    + D ++ P+    HR          LK+   C  +C +C     V 
Sbjct: 116 LSDSPMERGDVRLTMKDVDYLPVTD-THRMVTTGGHFAYLKIAEGCDKHCTYCII-PKVR 173

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYI 172
               +V      E A         + E+I         G D  +   KRL ++L+ L  I
Sbjct: 174 GDFRSVPMEHLLEEAQN--LADGGVKELILVAQETTMYGTD--LYGEKRLPQLLRALCKI 229

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
             ++ +R         P+ I  ELIQ +KE  K
Sbjct: 230 SGLRWIRI----LYCYPEEITDELIQVIKEEPK 258


>gi|227829999|ref|YP_002831778.1| radical SAM protein [Sulfolobus islandicus L.S.2.15]
 gi|229582731|ref|YP_002841130.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51]
 gi|227456446|gb|ACP35133.1| Radical SAM domain protein [Sulfolobus islandicus L.S.2.15]
 gi|228013447|gb|ACP49208.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51]
          Length = 394

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 8/120 (6%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           + +  +P+   L  + EE      ++    +   + +      L L + C   C +CF++
Sbjct: 33  LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
              G +K   +S K     + YI++  +  +V  T  GG+PL L  ++++++ + L  +K
Sbjct: 91  ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146


>gi|46581412|ref|YP_012220.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450834|gb|AAS97480.1| radical SAM domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311235069|gb|ADP87923.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1]
          Length = 327

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 11/96 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI------QEKSQIWEV 147
           P  + L+L + C + C FC    M G+ +   +  +  +A +  +      +   +I  V
Sbjct: 7   PRVVNLELTNRCDMGCVFCDHAAMRGTMRMGDMPPERLDAIVDQLLDALAGRRLPEIGMV 66

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHS 182
               G+P++  ++ L+  L +L  I  H   + F+S
Sbjct: 67  GL--GEPML--NRHLETHLASLARIAPHCDRVTFNS 98


>gi|322806672|emb|CBZ04241.1| ribosomal protein S12p Asp88 (E. coli) methylthiotransferase
           [Clostridium botulinum H04402 065]
          Length = 445

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%)

Query: 91  HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           H+Y D       RIL    +         C  +C +C    + G  +      ++    +
Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184

Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
             + ++  + E+I    D  +        K L ++L+ +  ++ V+ +R         P+
Sbjct: 185 ENLAKQ-GVREIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239

Query: 191 RINPELIQCLKEAGK 205
            I  ELI+ +K   K
Sbjct: 240 EITKELIEEIKNNDK 254


>gi|307730551|ref|YP_003907775.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
           CCGE1003]
 gi|307585086|gb|ADN58484.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
           CCGE1003]
          Length = 369

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 20/113 (17%)

Query: 77  PIGDNNHSPL--------KGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQ--- 121
           P+ D + +P+         G++H    R L    + +   C   C +C  R +       
Sbjct: 7   PVADLSAAPVISGPLQTPSGVLHDTLARPLRDLRISVTDRCNFRCVYCMPRAIFDKDYAF 66

Query: 122 --KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
                +LS ++ E           + ++  TGG+PL+   K L+ +++ L  +
Sbjct: 67  LPHSALLSFEEIERLARLFVAH-GVEKIRLTGGEPLL--RKNLEFLIERLAQL 116


>gi|2226152|emb|CAA74441.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
          Length = 346

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/153 (15%), Positives = 54/153 (35%), Gaps = 15/153 (9%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EAALAYIQ 139
           +  +     +  +   +  CP  C +C         +   + S         +    +++
Sbjct: 6   VPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEMQKIGEWLK 65

Query: 140 EKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELI 197
           E   ++  + F GG P  ++ + +  + + + R    V+ +R  + V    P  I  E +
Sbjct: 66  EHDVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREIT-VEAGRPDTITEEKL 124

Query: 198 QCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
             L +     + I      P  +  E + AI R
Sbjct: 125 AVLNKYDIDRISIN-----PQSYENETLKAIGR 152


>gi|296271625|ref|YP_003654256.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter
           nitrofigilis DSM 7299]
 gi|296095800|gb|ADG91750.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter
           nitrofigilis DSM 7299]
          Length = 482

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 49/218 (22%), Positives = 76/218 (34%), Gaps = 58/218 (26%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEK-SQ 143
            H++  RI + +   C + C +C R+     E         LS +D    + Y+     Q
Sbjct: 32  AHQHYARIHVAVAPACNIQCNYCNRKFDCSNESRPGVTSAKLSPEDAVKKVLYVGGDIQQ 91

Query: 144 IWEVIFTG-GDPLILSHK------------------------RLQKVLKTL--RYIKHVQ 176
           +  V   G GD L    K                        RL   +  +    + HV 
Sbjct: 92  LSVVGIAGPGDALANPKKTFDTFRMLHEKAPDQKLCLSTNGLRLPDYVDEMVKYNVDHV- 150

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA--------AIS 228
            +  +S    VDP            E G  +Y  +H NH   F  E            I 
Sbjct: 151 TVTINS----VDPT----------GEIGAKIYPWVHWNHEKVFGAEGAKILLEQQLKGIK 196

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
            L   GI++ + SVL+ G+ND  + L N+ +   EL +
Sbjct: 197 MLTERGILVKANSVLIPGVND--KELVNVAKKLKELNV 232


>gi|284039515|ref|YP_003389445.1| molybdenum cofactor biosynthesis protein A [Spirosoma linguale DSM
           74]
 gi|283818808|gb|ADB40646.1| molybdenum cofactor biosynthesis protein A [Spirosoma linguale DSM
           74]
          Length = 326

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 38/218 (17%), Positives = 75/218 (34%), Gaps = 25/218 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C   E +    K  VL+ ++ E  +  +     + +V  TGG+P + 
Sbjct: 15  LAVTDRCNLRCFYCMPEEGIKYLPKHQVLTYEEMERLVRVLAR-LGVQKVRITGGEPFV- 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI------ 211
               L   L  L  I  +  +   +   +  P       +  L      + +        
Sbjct: 73  -RAGLMDFLHRLAEIDGLNDISLTTNGVLTAPH---IPALAALGVKSVNLSLDTLDRERF 128

Query: 212 -HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF-VELRIKP 268
                  E     +  +  L  AGI     +V++ G N  D   L  + RT  V++R   
Sbjct: 129 YKITRRDEL-PAVLKTLDALLEAGIQTKINAVVMDGQNTQDLVPLTEMTRTMPVDVR--- 184

Query: 269 YYLHHPDLA--AGTSHFRLTIEEGQKIVASLKEKISGL 304
                 ++      SH+ +     ++I+  ++     L
Sbjct: 185 ---FIEEMPFNGEGSHYPVLNWTHRRIIDEIRAHFPDL 219


>gi|222100234|ref|YP_002534802.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359]
 gi|221572624|gb|ACM23436.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359]
          Length = 437

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 27/163 (16%)

Query: 62  PQKEELNILPEER--------EDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCR 110
           P   EL+    E+        +D   +      +   +RY DR L   + L H C   C 
Sbjct: 27  PSSAELSKAEVEKLKRGMFLLDDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCV 86

Query: 111 FCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK--R 161
           +C+++ ++    G+ +S K       D E  L Y  +K  +  V F GG+PL+L      
Sbjct: 87  YCYQK-VIHISSGSYISEKVQSNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEETVVN 143

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           L   LK L     V+   F     + +   +  +++  L++AG
Sbjct: 144 LSSKLKRLCEKYGVKYDSF----IVTNGYLLTEKMVDDLQKAG 182


>gi|210621258|ref|ZP_03292564.1| hypothetical protein CLOHIR_00507 [Clostridium hiranonis DSM 13275]
 gi|210154869|gb|EEA85875.1| hypothetical protein CLOHIR_00507 [Clostridium hiranonis DSM 13275]
          Length = 349

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 50/254 (19%), Positives = 87/254 (34%), Gaps = 55/254 (21%)

Query: 43  IANLINPHNPNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRI- 97
           + NLI+    N     Q +  KEE    L I  ++  D + +        I   Y  R+ 
Sbjct: 1   MKNLIDKLEKN-----QIL-SKEEFVRLLAISEKDDIDYLTERAKCVRDDI---YGKRVF 51

Query: 98  ---LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
              L+++ + C   C +C  R    + +   LS +   +      E      V+  G D 
Sbjct: 52  IRGLIEISNYCKNDCYYCGIRRSNKNAQRYRLSKEQILSCCENGYELGFRTFVMQGGEDA 111

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVP---IVDP--QRINPELIQCLKEAGKPVYI 209
                  +  ++ +++            R P   +     +R      + +KEAG   Y+
Sbjct: 112 FF-KDDVVCDIVSSIKE-----------RYPDCAVTLSLGERSTESY-RKMKEAGADRYL 158

Query: 210 -------AIHAN--HPYEFSEEAIAAISRLANA-------GIILLS--QSVLLKGINDDP 251
                   IH N  HP E   E      R   A       GI++ S  Q+  L+ I +D 
Sbjct: 159 LRHETFDNIHYNKLHPVELDPENRKRCLRDLKALRYQTGTGIMVGSPYQT--LENIAEDL 216

Query: 252 EILANLMRTFVELR 265
             +  L    + + 
Sbjct: 217 LFIKELNPEMIGIG 230


>gi|148270585|ref|YP_001245045.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
 gi|170289289|ref|YP_001739527.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
 gi|281412894|ref|YP_003346973.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
 gi|147736129|gb|ABQ47469.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
 gi|170176792|gb|ACB09844.1| Radical SAM domain protein [Thermotoga sp. RQ2]
 gi|281373997|gb|ADA67559.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
          Length = 454

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 27/163 (16%)

Query: 62  PQKEELNILPEER--------EDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCR 110
           P   EL+    E+        +D   +      +   +RY DR L   + L H C   C 
Sbjct: 44  PSSAELSKAEVEKLKRGMFLLDDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCV 103

Query: 111 FCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK--R 161
           +C+++ ++    G+ +S K       D E  L Y  +K  +  V F GG+PL+L      
Sbjct: 104 YCYQK-VIHISSGSYISEKVQSNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEETVVN 160

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           L   LK L     V+   F     + +   +  +++  L++AG
Sbjct: 161 LSSKLKRLCEKYGVKYDSF----IVTNGYLLTEKMVDDLQKAG 199


>gi|18977826|ref|NP_579183.1| hypothetical protein PF1454 [Pyrococcus furiosus DSM 3638]
 gi|18893579|gb|AAL81578.1| hypothetical protein PF1454 [Pyrococcus furiosus DSM 3638]
          Length = 588

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 49/249 (19%), Positives = 83/249 (33%), Gaps = 54/249 (21%)

Query: 91  HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQI--W 145
           HR    +L + L + C + C +CF       +   V   + +     L   ++++ I   
Sbjct: 136 HRSHTNLLNIVLTNRCNLSCWYCF---FYAREGEPVYEPTLEQIRMMLRNAKKENPIGAN 192

Query: 146 EVIFTGGDPLILSHKRLQKV-LKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCL 200
            V FTGG+P  L    ++ + +       HVQ+    +R              PEL++ +
Sbjct: 193 AVQFTGGEP-TLRDDLIEIIKIAKEEGYDHVQLNTDGIRLA----------FEPELVKKI 241

Query: 201 KEAGKPVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
           +EAG       +          NH  E        + +    GI+L+    L++ +ND  
Sbjct: 242 REAGVNTLYLSYDGMTPQTNWKNHW-EI-PLIFENVRKAGGPGIVLV--PTLIRNVNDHE 297

Query: 252 E---ILANLMRTFVELRIKPYYLHHP------DLAAGTSHFRLTIEEGQ-KIVASLKEKI 301
               I   L    +   +       P              FR+TI     KI       I
Sbjct: 298 AGAIINFGLNHLDIVRGVN----FQPISLVGRVPKKERQRFRITIAGAIKKIEEQTNGAI 353

Query: 302 S---GLCQP 307
           S       P
Sbjct: 354 SRDDWYPIP 362


>gi|302875219|ref|YP_003843852.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307688900|ref|ZP_07631346.1| biotin synthase [Clostridium cellulovorans 743B]
 gi|302578076|gb|ADL52088.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
          Length = 346

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 18/109 (16%)

Query: 76  DPIGDNNHSPLKGIVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
           D   +   S    +  +Y       R LL+  +VC   C +C  R    + +   LS + 
Sbjct: 26  DQYDEELFSAANRVTEKYLGNQVELRGLLEFTNVCKRNCLYCGLRRENNNIERYRLSKEQ 85

Query: 131 T----EAALAYIQEKSQIWEVIFTGG--DPLILSHKRLQKVLKTLRYIK 173
                + A++Y         ++  GG  D   +  +RL +++K ++ + 
Sbjct: 86  ILDFSKKAVSY-----GYNTIVLQGGEDDYFTV--ERLSEIIKEIKQLD 127


>gi|198277605|ref|ZP_03210136.1| hypothetical protein BACPLE_03827 [Bacteroides plebeius DSM 17135]
 gi|198270103|gb|EDY94373.1| hypothetical protein BACPLE_03827 [Bacteroides plebeius DSM 17135]
          Length = 153

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 23/59 (38%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            C   C+ C   E    + G  L+ +  E  +  I     +  V F+GGDP     + L
Sbjct: 26  GCAHRCKGCHNPESWNPKAGKPLTQEVLEQIIQEINANPLLDGVTFSGGDPFYNPEEFL 84


>gi|323692752|ref|ZP_08106980.1| hypothetical protein HMPREF9475_01843 [Clostridium symbiosum
           WAL-14673]
 gi|323503194|gb|EGB19028.1| hypothetical protein HMPREF9475_01843 [Clostridium symbiosum
           WAL-14673]
          Length = 436

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 23/132 (17%)

Query: 94  PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  +K+   C  +C +C     R  +     G V+   +  AA  Y        E++ 
Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRAIGDVVKEVEGLAAAGY-------KEIVL 194

Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           T       G D      + L  ++  L  I+ ++ +R  S    ++P+ I  E +  L  
Sbjct: 195 TGIHLSSYGVDFSEEKRENLLSLITCLDKIQGIERIRLGS----LEPRIITEEFVSALAG 250

Query: 203 AGKPVYIAIHAN 214
             K +    H +
Sbjct: 251 L-KSICPHFHLS 261


>gi|297531012|ref|YP_003672287.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. C56-T3]
 gi|297254264|gb|ADI27710.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. C56-T3]
          Length = 341

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           L +   C   C +C   E+ G       +  +L+ ++  A LA    +  + ++  TGG+
Sbjct: 22  LSVTDQCNFRCVYCMPAEVFGPNFRFLAEDQLLTVEEM-ALLAECFVELGVEKIRLTGGE 80

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+     L  +++ L  +  ++ +
Sbjct: 81  PLLRRD--LDALIERLSALPGLRDI 103


>gi|283780939|ref|YP_003371694.1| MiaB-like tRNA modifying enzyme YliG [Pirellula staleyi DSM 6068]
 gi|283439392|gb|ADB17834.1| MiaB-like tRNA modifying enzyme YliG [Pirellula staleyi DSM 6068]
          Length = 465

 Score = 42.0 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 53/154 (34%), Gaps = 25/154 (16%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150
             LK+   C   C FC   +M G  K      ++       +        VI        
Sbjct: 164 AYLKISEGCDRLCTFCAIPKMRG--KHATKPMEEVLKEARQLAADGVKELVIVAQDTTYY 221

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
           G D  +    RL ++L+ +  ++ +Q +R         P  I  ELI  + ++ K V YI
Sbjct: 222 GID--LYGEPRLAELLREIEKVEGIQWIRL----MYFYPMYITDELIDVIAKSEKIVPYI 275

Query: 210 AI---HANH------PYEFS-EEAIAAISRLANA 233
            +   H N           +  E    I +L  A
Sbjct: 276 DMPLQHINDTMLRRMSRRVTRAETELQIKKLREA 309


>gi|282860156|ref|ZP_06269231.1| MiaB-like protein [Prevotella bivia JCVIHMP010]
 gi|282587045|gb|EFB92275.1| MiaB-like protein [Prevotella bivia JCVIHMP010]
          Length = 451

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  +C +C      G  +   ++S  K  E A+A         E++ TG
Sbjct: 158 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVKQAEEAVA-----EGGREIVLTG 212

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
              GD    + +    ++K L  ++ ++  R  S    ++P  I+ ELI     +     
Sbjct: 213 VNIGDFGRTTSESFLDLVKALDKVEGIERYRISS----LEPDLIDDELIAYCATSKH--- 265

Query: 209 IAIHA 213
              H 
Sbjct: 266 FMPHF 270


>gi|269139692|ref|YP_003296393.1| molybdenum cofactor biosynthesis protein A [Edwardsiella tarda
           EIB202]
 gi|267985353|gb|ACY85182.1| molybdenum cofactor biosynthesis protein A [Edwardsiella tarda
           EIB202]
 gi|304559561|gb|ADM42225.1| Molybdenum cofactor biosynthesis protein A [Edwardsiella tarda
           FL6-60]
          Length = 328

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 42/259 (16%), Positives = 81/259 (31%), Gaps = 55/259 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           L +  VC   C +C               LS  +               +V  TGG+P +
Sbjct: 17  LSVTDVCNFRCTYCLPDGYRPDSHAAKRFLSRDEIRRISHAFAALGT-EKVRLTGGEPTL 75

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-- 214
                   ++  +R    ++ L         +  R+  ++    ++AG    I +  +  
Sbjct: 76  RRD--FCDIVAAVRENPAIRTL-----AVTTNGYRMARDVGAW-RDAGLT-AINVSVDSL 126

Query: 215 -----HPYEFSEEAIAA-----ISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE 263
                H    + E   A     I    +AG   +   +VL++G+ND      +L      
Sbjct: 127 DARQFHA--ITGEDRFAQVMAGIDAAFDAGFERIKVNTVLMRGVND-----GSLKAFLHW 179

Query: 264 LRIKPYYLHHPDLAA------GTSHFR---LTIE--EGQKIVASLKEKISGLCQPFYILD 312
           +R +P                G+  FR   ++      Q + A  + ++ G         
Sbjct: 180 IRRRP---IQMRFIELMETGDGSELFRRHHVSGATIRAQLLAAGWQRRLPGR-------- 228

Query: 313 LPGGYGKVKIDTHNIKKVG 331
              G  +V      + +VG
Sbjct: 229 -SDGPAQVFWHPDYLGEVG 246


>gi|319793190|ref|YP_004154830.1| molybdenum cofactor biosynthesis protein a [Variovorax paradoxus
           EPS]
 gi|315595653|gb|ADU36719.1| molybdenum cofactor biosynthesis protein A [Variovorax paradoxus
           EPS]
          Length = 386

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 12/97 (12%)

Query: 85  PLKGIVHRYPDRIL----LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL 135
           P  G++     R L    + +   C   C +C     F ++        +LS ++     
Sbjct: 31  PATGLLRDRLGRPLTDLRISVTDRCNFRCSYCMPKDVFDKDYKYLPHSALLSFEEMTRLA 90

Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
                   + ++  TGG+PL+   K ++ +++ L  I
Sbjct: 91  RLFAAH-GVRKIRLTGGEPLL--RKNIEALIEQLAEI 124


>gi|257094392|ref|YP_003168033.1| Radical SAM domain-containing protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046916|gb|ACV36104.1| Radical SAM domain protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 332

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
             +  R  + + + L + C   C  C      G Q+   ++++  +A LA+I    ++  
Sbjct: 14  PALTRRSVETVQVNLGYRCNQSCLHCHVNA--GPQRKEEMTAETIDALLAFIAASPEVKV 71

Query: 147 VIFTGGDP-LILSHKRL 162
           +  TGG P L  + +RL
Sbjct: 72  LDLTGGAPELNPNFRRL 88


>gi|124009850|ref|ZP_01694518.1| radical SAM domain protein [Microscilla marina ATCC 23134]
 gi|123984171|gb|EAY24532.1| radical SAM domain protein [Microscilla marina ATCC 23134]
          Length = 310

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 28/166 (16%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           + +      +C   C  C+    +   KG  +S ++    +  +    +I  +I +GG+P
Sbjct: 9   ESVYWVFTQLCNDQCAHCY---NLSGPKGAKMSEEECMQIIENLP--PKIDRIILSGGEP 63

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF--HSR-VPIVDPQRINPELIQCLKEAGKPVYIAI 211
           L    ++L  +L  L+        R+  H++ +   +   +  E++  L   G   +   
Sbjct: 64  L-AERQKLYAILDRLKQ-------RYPAHTQLMLQTNGDLLTEEILDTLIAKGVTRFDIA 115

Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILAN 256
                  F + A A ++ LA+            +G+N DD + L +
Sbjct: 116 SI---DRFHKNAGARLTELADMFAS--------RGVNGDDKDPLVD 150


>gi|317152637|ref|YP_004120685.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
           aespoeensis Aspo-2]
 gi|316942888|gb|ADU61939.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio
           aespoeensis Aspo-2]
          Length = 333

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 40/255 (15%), Positives = 89/255 (34%), Gaps = 47/255 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C            +L  ++    +  +  +  + +  FTGG+P +  
Sbjct: 18  ISVTDRCNLRCTYCAGEGQEFVPHSDILRYEEILELMD-MATRLGMVKFRFTGGEPFV-R 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPY 217
                 ++        V +        +     +  E +  L  +G + V I++    P 
Sbjct: 76  KGFADFLIAAAARFPGVDMC-------VTTNATLIGEHVDRLASSGVRRVNISLDTLDPE 128

Query: 218 EFS--------EEAIAAISRLANAGIILLSQSVLLKGINDD--PEILANLMRTFVELRIK 267
           +F         +   A I R  +AG+++   +V +KGIND   P  +       +++R  
Sbjct: 129 KFHRVTGFDKYDVVRANIDRCLDAGMVVKVNAVAMKGINDGELPGFIEFARSRPLDMR-- 186

Query: 268 PYYLHHPDLAAGTS-----HFRLTIEEGQKIVASL-----------KEKISGLCQPFYIL 311
                   +  G       H   ++ + + I+A             +  + G   P    
Sbjct: 187 ----FIEFMPVGLETGWSDH---SVWKAEDILAQASALAELVPSGGEGNVPG--GPARTF 237

Query: 312 DLPGGYGKVKIDTHN 326
           D+ GG G++ + +  
Sbjct: 238 DIVGGQGRIGVISPY 252


>gi|153812695|ref|ZP_01965363.1| hypothetical protein RUMOBE_03102 [Ruminococcus obeum ATCC 29174]
 gi|149831211|gb|EDM86300.1| hypothetical protein RUMOBE_03102 [Ruminococcus obeum ATCC 29174]
          Length = 419

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 31/132 (23%)

Query: 96  RILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R  +K+   C  +C +C     R  +   +   VL   +T AA  Y        EV+ TG
Sbjct: 124 RAYIKVQDGCNQFCTYCIIPFARGRVRSRKIEDVLREVETLAAKGY-------KEVVLTG 176

Query: 152 GDPLILS----------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
                LS           + L  +++ +  ++ +  +R  S    ++P+ I  E ++ + 
Sbjct: 177 I---HLSSYGVDFPKEERESLLSLIQAVSRVEGISRIRLGS----LEPRIITEEFLEGIV 229

Query: 202 EAGKPVYIAIHA 213
           + GK   +  H 
Sbjct: 230 KTGK---VCPHF 238


>gi|56421035|ref|YP_148353.1| hypothetical protein GK2500 [Geobacillus kaustophilus HTA426]
 gi|261418482|ref|YP_003252164.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC61]
 gi|319767557|ref|YP_004133058.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC52]
 gi|56380877|dbj|BAD76785.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
 gi|261374939|gb|ACX77682.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC61]
 gi|317112423|gb|ADU94915.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC52]
          Length = 449

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C FC      G  + +    +    A   +       E++ T   
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPQEIIRQARQLVAA--GYKEIVLTGIH 198

Query: 151 ----GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D   L       +L+ L   +  ++ LR  S    ++  +I  E+I  LK + K
Sbjct: 199 TGGYGTD---LKDYNFASLLRDLDEQVPGLKRLRISS----IEASQITDEVIDVLKRSEK 251

Query: 206 PVYIAIHA 213
            +   +H 
Sbjct: 252 -IVRHLHI 258


>gi|326407736|gb|ADZ64807.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis
           subsp. lactis CV56]
          Length = 707

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 28/184 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
             L + C + C+FC+    +   +G  L   +    L  I +  +   V   GG+P    
Sbjct: 13  WMLTNKCNLRCKFCY----LEDYQGKELELDEINQVLD-IIQDKEFTHVSLLGGEP--TE 65

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHANHP 216
            +  + ++  L        LR  S     + Q++  N ELI+ L ++     + I    P
Sbjct: 66  CEYFEHIIIQLEK------LRI-SYSFSTNGQKLFRNEELIRILSKSKYLKEVQISLESP 118

Query: 217 YEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF--VEL 264
            +   +A+           +++ L    +      V+ K  N   + + ++  T    EL
Sbjct: 119 QKLINDAVRGKGTFESAIKSVALLVKENVPTRLAMVVTKENNSTIQQMIDMCATLGCREL 178

Query: 265 RIKP 268
           R+ P
Sbjct: 179 RLMP 182


>gi|227486728|ref|ZP_03917044.1| 2-methylthioadenine synthetase [Anaerococcus lactolyticus ATCC
           51172]
 gi|227235316|gb|EEI85331.1| 2-methylthioadenine synthetase [Anaerococcus lactolyticus ATCC
           51172]
          Length = 432

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 16/118 (13%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152
            R  +K+   C +YC +C      G+     + S  K+ E        ++   E++ TG 
Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNVVSRPMDSIVKEAERL-----AENGFKEIVLTGI 196

Query: 153 DPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                         L  V++ +  +  ++ +R  S    ++P+ I  + ++ +K   K
Sbjct: 197 HVASYGKDFKDGISLIDVIENVAKVDGIKRIRLSS----MEPRHITRDFLERMKATKK 250


>gi|170041251|ref|XP_001848384.1| molybdopterin cofactor synthesis protein a [Culex quinquefasciatus]
 gi|167864830|gb|EDS28213.1| molybdopterin cofactor synthesis protein a [Culex quinquefasciatus]
          Length = 553

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 33/207 (15%)

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQ 139
              SPL     R+   + + L   C + C++C   E V  + K ++L++ +    LA + 
Sbjct: 27  EEASPLTDKFGRFHSYLRISLTERCNLRCKYCMPEEGVPLTAKDSLLTTDEVLR-LAGLF 85

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
            +  + ++  TGG+P +     L  ++  L+ I  ++ +   +   +     +  +L+  
Sbjct: 86  VREGVRKIRLTGGEPTVRKD--LTDIVAALKRIPSLESVGITTNGLM-----LTRQLVGL 138

Query: 200 LKEA--GKPVYIAIHANHPYEFSEEAIAAISRLAN-----AGIILLSQ--------SVLL 244
            +    G  + +                 I+R        AGI L  Q         VL+
Sbjct: 139 QRAGLDGLNISLDT-------LKAAKYERITRRKGWERVIAGIDLAIQLGYKPKVNCVLM 191

Query: 245 KGINDDP--EILANLMRTFVELRIKPY 269
           KG NDD   + +       V++R   Y
Sbjct: 192 KGFNDDELCDFVEMTRDRCVDIRFIEY 218


>gi|115351039|ref|YP_772878.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           AMMD]
 gi|115281027|gb|ABI86544.1| GTP cyclohydrolase subunit MoaA [Burkholderia ambifaria AMMD]
          Length = 370

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%)

Query: 77  PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
           P+ D +  P + G+ H  PD  L            + +   C   C +C     F ++  
Sbjct: 7   PLADVSGMPDISGVAHT-PDGALADRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKDYP 65

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
                 +L+ ++ E           + ++  TGG+PL+   K L+ +++ L  +
Sbjct: 66  FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116


>gi|256751948|ref|ZP_05492818.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749153|gb|EEU62187.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
          Length = 333

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 15/117 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           ++L + C + C +C+++ ++GS+   +L  K  +  +  +     +  VI  GG+PL+  
Sbjct: 24  IELTNRCNLDCIYCYKK-VIGSRNDDILPEKAIDIIVENLGSNPAVL-VILEGGEPLLHP 81

Query: 159 HKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
                + ++    +K     V IL   +   +  P+ I  +L +   +    V I++
Sbjct: 82  -----RFIEIFYKLKEYSVAVDILTNGT---LFTPE-IVHDLAKIFSQKYDSVQISL 129


>gi|167630039|ref|YP_001680538.1| radical sam [Heliobacterium modesticaldum Ice1]
 gi|167592779|gb|ABZ84527.1| radical sam [Heliobacterium modesticaldum Ice1]
          Length = 331

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 16/106 (15%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
             + C ++C  C+R    G +    L++++ +  L  I + +    +IF+GG+PL+    
Sbjct: 7   TTNQCNMFCDHCYRDA--GVKADQELNTQEGKQLLDEIAK-AGFKIMIFSGGEPLMRPD- 62

Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
                +  L      + LR  F +   +     I  EL + LK+AG
Sbjct: 63  -----IVELVAYATSKGLRSVFGTNGTL-----ITRELARDLKKAG 98


>gi|146297144|ref|YP_001180915.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|238065313|sp|A4XLD9|RIMO_CALS8 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|145410720|gb|ABP67724.1| SSU ribosomal protein S12P methylthiotransferase
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 440

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 12/116 (10%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL- 155
             +K+   C   C +C    + G+     +   D       + E     E++ T  D   
Sbjct: 148 AYIKIAEGCNNRCSYCSIPLIRGNYTSRYI--DDIIQEARKLSED-GYKEIVLTAQDTTK 204

Query: 156 ----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
               I   K L  +L+ L  I +++ +RF        P+ I+ EL+  +K   K V
Sbjct: 205 YGIDIYQKKMLATLLQKLSEIDNIKWIRF----LYSYPEDIDDELLNIVKSLPKVV 256


>gi|291550415|emb|CBL26677.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruminococcus torques
           L2-14]
          Length = 482

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 61/132 (46%), Gaps = 19/132 (14%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWE 146
           +  +YP +  + ++  C  +C +C    + G ++     +  ++ E  +A       + E
Sbjct: 183 VERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSREPKAIIREIERLVA-----DGVVE 237

Query: 147 VIFTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           V+  G + +    K L++      +L+ +  I+ ++ +RF +      P+ ++ ELI+ +
Sbjct: 238 VMLLGQN-VNSYGKNLEEPMTFAQLLQEIEKIEGLERIRFMTSH----PKDLSDELIEVM 292

Query: 201 KEAGKPVYIAIH 212
            ++ K +   +H
Sbjct: 293 SKS-KKICKHLH 303


>gi|120601419|ref|YP_965819.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|120561648|gb|ABM27392.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4]
          Length = 317

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 20/180 (11%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWEVIF 149
           +P R+ L+L + C   C  C R    G          D +    AL  I +       +F
Sbjct: 33  FPQRLQLELTNCCNNDCVMCPRH---GGHFTRKPKHMDLDLVRRALDEIAQHYNYQLQLF 89

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
             G+PL+    R+ ++L  L     +      S+   + P  +   L   +      +  
Sbjct: 90  HIGEPLLHP--RIFEILDMLEDYPTLGRKWISSKGQELTPDIMRRVLTSKVDYFNYSLLA 147

Query: 210 AIHANHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
              A +                + RLA+    L  Q   L+        +  +     E+
Sbjct: 148 MTPATYAR-IVPNGDYATVRGNLERLADLKRDLGVQRPYLR------AQMIEMDEALHEI 200


>gi|172060044|ref|YP_001807696.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           MC40-6]
 gi|171992561|gb|ACB63480.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           MC40-6]
          Length = 370

 Score = 42.0 bits (98), Expect = 0.14,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%)

Query: 77  PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
           P+ D +  P + G+ H  PD  L            + +   C   C +C     F ++  
Sbjct: 7   PLADVSGMPDISGVAHT-PDGALADRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKDYP 65

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
                 +L+ ++ E           + ++  TGG+PL+   K L+ +++ L  +
Sbjct: 66  FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116


>gi|331091338|ref|ZP_08340178.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330404499|gb|EGG84043.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 449

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 28/131 (21%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  LK+   C  +C +C     R  +   +K  V++      A  Y        EV+ 
Sbjct: 162 HTRAYLKVQDGCNQFCTYCIIPYARGRVRSREKENVVAEVKQLVANGY-------QEVVL 214

Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           T       G D   L  + L  ++  +  I+ ++ +R  S    ++P+ I  E  + +  
Sbjct: 215 TGIHLSSYGVD---LQGEDLLSLILAVNEIEGLKRIRLGS----LEPRIITEEFAKTISG 267

Query: 203 AGKPVYIAIHA 213
             K   I  H 
Sbjct: 268 LEK---ICPHF 275


>gi|225424671|ref|XP_002262749.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|296086557|emb|CBI32146.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 36/188 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-----EKSQIWEVI 148
            + + +     C + C+FC+   M       + +++  E A+ Y +     E   I  V+
Sbjct: 179 RNTVCVSSQVGCAMNCQFCYTGRM--GLTRHLTAAEIVEQAV-YARRLFSSEVGSITNVV 235

Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           F G G+P       ++ V+K    + H Q L F  R   V    + P+L   L+E+   +
Sbjct: 236 FMGMGEPF----HNIESVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLKHFLRESNCAL 291

Query: 208 YIAIHANHPYEFSEEAIAAISRL-ANAGIILLSQS-----------------VLLKGIND 249
            ++++A      ++E    +  +     + LL Q+                 V+L G+ND
Sbjct: 292 AVSLNAT-----TDEVRNWVMPINRKYNLSLLLQTLREELRSKHNYKVLFEYVMLAGVND 346

Query: 250 DPEILANL 257
             E    L
Sbjct: 347 SLEDARRL 354


>gi|209521138|ref|ZP_03269865.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. H160]
 gi|209498413|gb|EDZ98541.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. H160]
          Length = 382

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R +            +LS ++ E           + ++  TGG+
Sbjct: 54  ISVTDRCNFRCVYCMPRAVFDKDYAFLPHSALLSFEEIERLAQLFVAH-GVEKIRLTGGE 112

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K L+ +++ L  +
Sbjct: 113 PLL--RKNLEFLIERLARL 129


>gi|282853150|ref|ZP_06262487.1| radical SAM domain protein [Propionibacterium acnes J139]
 gi|282582603|gb|EFB87983.1| radical SAM domain protein [Propionibacterium acnes J139]
          Length = 364

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 67/157 (42%), Gaps = 13/157 (8%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           RY   ++L     C + C +C+RR+  G +    ++    +     ++   +   V   G
Sbjct: 4   RY---LVLWPTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEDVRTTGRPAHVQLAG 60

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+P  L    ++ V K +  I+  ++    +     +  R++ ++I  LK     V +++
Sbjct: 61  GEP-TLVPSLIEHVAKRVVEIRWEKV----TCGIQTNAARLDGDIIAMLKRHSVRVGVSV 115

Query: 212 HANHP-YEFSEEAIAA----ISRLANAGIILLSQSVL 243
               P +E +  + A     +  LA+A I +   +VL
Sbjct: 116 DGPPPVHEKTRGSAAQTFRGLLALAHADIPVRVTTVL 152


>gi|150021064|ref|YP_001306418.1| radical SAM domain-containing protein [Thermosipho melanesiensis
           BI429]
 gi|149793585|gb|ABR31033.1| Radical SAM domain protein [Thermosipho melanesiensis BI429]
          Length = 314

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 40/112 (35%), Gaps = 15/112 (13%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           +      C   C FC +  M G     + +  D    +    +     E+ F GG     
Sbjct: 5   IFLPNAGCKNRCIFCNQYSMTG---EKMPTKSDILKIID---KYPIKNEIAFYGG---TF 55

Query: 158 SHKRLQKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           +   ++K ++ L  +K + + +R  +R     P  I  E +  LK+      
Sbjct: 56  TGLSIKKQIEILESVKFLNLPIRISTR-----PDEITEENLHILKKYNVKTI 102


>gi|167752159|ref|ZP_02424286.1| hypothetical protein ALIPUT_00401 [Alistipes putredinis DSM 17216]
 gi|167660400|gb|EDS04530.1| hypothetical protein ALIPUT_00401 [Alistipes putredinis DSM 17216]
          Length = 433

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 13/141 (9%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C   C +C      G+ +   ++  D       I    Q  E++ TG  
Sbjct: 142 RTRAFLKVQDGCDYKCAYCTIHYARGASRNMPIA--DLVKEAEQIAAAGQ-REIVITGIN 198

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +R   +L+ L  ++ ++  R  S    ++P  +  E+I     + K     
Sbjct: 199 TGDFGRTTGERFIDLLRALNEVEGIERYRISS----IEPNLLTDEIIAFCASSPK---FQ 251

Query: 211 IHANHPYEFSEEAIAAISRLA 231
            H + P +   +++ A  R  
Sbjct: 252 HHFHIPLQSGSDSVLARMRRR 272


>gi|160933141|ref|ZP_02080530.1| hypothetical protein CLOLEP_01984 [Clostridium leptum DSM 753]
 gi|156868215|gb|EDO61587.1| hypothetical protein CLOLEP_01984 [Clostridium leptum DSM 753]
          Length = 424

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 59/136 (43%), Gaps = 14/136 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAY-IQEKSQI-WEVIFTGGDP 154
           LK+   C  +C +C    + G  +   +     + E    + ++E   I  +    G D 
Sbjct: 129 LKIAEGCDNHCTYCAIPLIRGGYRSRKMEDILAEAEKLAQWGVKELMVIAQDTTRYGED- 187

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHA 213
            +    +L ++L  L  ++ ++ +R    V    P+RI  EL++ + +  K + Y+ +  
Sbjct: 188 -LYGEGKLPQLLTELCKVEGLRWIR----VLYCYPERITDELLEVMAKEDKILKYMDLPL 242

Query: 214 NHPYEFSEEAIAAISR 229
            H    S + + A++R
Sbjct: 243 QH---CSRQVLRAMNR 255


>gi|302325942|gb|ADL25143.1| radical SAM domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 336

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 16/114 (14%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y   +     + C + C+ C++    G  K   L++ +    +  I + +    +IF+GG
Sbjct: 5   YGMIVSWMTTNKCNLTCKHCYQDA--GENKSAELTTDEALKLIDEIAK-AGFKIMIFSGG 61

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
           +P+          +  L      + LR  F +   +     I  +L   LKEAG
Sbjct: 62  EPMTRPD------IVELVAHARERGLRPVFGTNGTL-----ITHDLAFMLKEAG 104


>gi|227498447|ref|ZP_03928593.1| predicted protein [Acidaminococcus sp. D21]
 gi|226903905|gb|EEH89823.1| predicted protein [Acidaminococcus sp. D21]
          Length = 369

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGG 152
           + I L L + C + CR+C +  +V       ++          + E     E  + F GG
Sbjct: 10  NTIFLMLGNGCNMNCRYCLQHPLVEKSLSGHVNPDVYRFIRQVVDENDDKTELGLHFYGG 69

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           +PLI     +++++  L+    V+ +RF +   I + + I  E+++        V I+
Sbjct: 70  EPLI-YFPLMKEIIGKLKD---VKGIRFST---ISNGKAITDEMVELFNSLPLYVCIS 120


>gi|73541963|ref|YP_296483.1| molybdenum cofactor biosynthesis protein A [Ralstonia eutropha
           JMP134]
 gi|72119376|gb|AAZ61639.1| GTP cyclohydrolase subunit MoaA [Ralstonia eutropha JMP134]
          Length = 396

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 45/260 (17%), Positives = 83/260 (31%), Gaps = 55/260 (21%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +  D   R   P   E  + P      + D    PL  +         + +   C   C 
Sbjct: 32  DLRDHRYRSMTPSIPETLVEPSGL---VADTRARPLHDLR--------ISVTDRCNFRCV 80

Query: 111 FCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           +C  +E+            +LS ++ E           + ++  TGG+PL+   K ++K+
Sbjct: 81  YCMPKEVFDKDYTFLPHSELLSFEEIERTARLFVS-LGVEKIRLTGGEPLL--RKNIEKL 137

Query: 166 LKTLRYIKHV--------------------QILR-FHSRVPIVDPQRINPELIQCLKEAG 204
           ++ L  I  V                    Q LR    R   V    I+    + + +  
Sbjct: 138 VEMLARIDTVSGKPLDLTLTTNASLLARKAQSLRDAGLRRVSVSLDAIDDVTFRRMNDVD 197

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
             V   +H         E   A+         +    V+ +G ND    +  + R F   
Sbjct: 198 FAVADVLH-------GIETAQAVGL-----APIKVNMVVKRGTND--AEIVPMARHFRGS 243

Query: 265 RIKPYYLHHPDLAAGTSHFR 284
            I   Y+   D    ++H++
Sbjct: 244 GIIVRYIEFMD-VGASNHWQ 262


>gi|256831301|ref|YP_003160028.1| Radical SAM domain-containing protein [Jonesia denitrificans DSM
           20603]
 gi|256684832|gb|ACV07725.1| Radical SAM domain protein [Jonesia denitrificans DSM 20603]
          Length = 386

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 13/128 (10%)

Query: 81  NNHSPLKGIVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
           + H  ++ + H   DR    + ++   C + C+ C R +    +    L+++  +A L  
Sbjct: 5   DEHRSVRRLHHDAGDRPMITIWEVTRACALVCQHC-RADAQHRRNPRELTTEQGKALLDN 63

Query: 138 IQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
           I    + +  V+ TGGDP           L  L    H Q L      P V P ++ P+ 
Sbjct: 64  IASFGKPFPIVVMTGGDPFERDD------LAELVAHGHAQGLHMAL-SPSVTP-KMTPQR 115

Query: 197 IQCLKEAG 204
           ++ L+ AG
Sbjct: 116 LRELRAAG 123


>gi|51244049|ref|YP_063933.1| hypothetical protein DP0197 [Desulfotalea psychrophila LSv54]
 gi|50875086|emb|CAG34926.1| hypothetical protein DP0197 [Desulfotalea psychrophila LSv54]
          Length = 312

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 39/178 (21%)

Query: 104 VCPVYCRFCFRRE---MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSH 159
           VC + C +C       + G +K  V   K  E  L Y         + F+G G+P  LS 
Sbjct: 27  VCSLDCIYCESGRTTVLTGERKEYVSHEKVKEELLDYFANNPDPDYITFSGSGEP-TLS- 84

Query: 160 KRLQKVLKTLRYI----KHVQ--ILRFHS--RVPIVDPQRINPELI---------QCLKE 202
               ++  T+ +I     +V+  +L   +    P V  + +  +L+            + 
Sbjct: 85  ---SRIGDTIEFIKAQKPNVKVAVLTNGTLFSNPAVRRELMGADLVIPSLDAATWDSFRR 141

Query: 203 AGKPVY---IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
             +P+    +  H      F EE    +       + +L    +L G+NDD E LA L
Sbjct: 142 INRPLATLDLDTHIEGIRLFKEEFSGKMD------LEIL----ILPGVNDDEESLAAL 189


>gi|323486941|ref|ZP_08092256.1| hypothetical protein HMPREF9474_04007 [Clostridium symbiosum
           WAL-14163]
 gi|323399713|gb|EGA92096.1| hypothetical protein HMPREF9474_04007 [Clostridium symbiosum
           WAL-14163]
          Length = 503

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 60/129 (46%), Gaps = 15/129 (11%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +YP +  + ++  C  +C +C    + G ++    + +D    +  +   S + E++ 
Sbjct: 197 ERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSR--NPEDIIREIEALVA-SGVVEIML 253

Query: 150 TGGDPLILSHKRLQ------KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
            G + +    K L+      ++L+ +  I+ ++ +RF +      P+ ++ ELI+ +K +
Sbjct: 254 LGQN-VNSYGKNLEKPITFAELLQQIEQIEGLERIRFMTSH----PKDLSDELIEVMKHS 308

Query: 204 GKPVYIAIH 212
            K +   +H
Sbjct: 309 RK-ICRHLH 316


>gi|269126500|ref|YP_003299870.1| molybdenum cofactor biosynthesis protein A [Thermomonospora curvata
           DSM 43183]
 gi|268311458|gb|ACY97832.1| molybdenum cofactor biosynthesis protein A [Thermomonospora curvata
           DSM 43183]
          Length = 329

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 48/249 (19%), Positives = 93/249 (37%), Gaps = 45/249 (18%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C   E +    K  +L+  +    +A    +  I EV +TGG+PL+ 
Sbjct: 15  VSLTDRCNLRCTYCMPPEGLPWLPKPQLLTDDEVVRLVAIGVRRLGITEVRYTGGEPLL- 73

Query: 158 SHKRLQKVLKT---LRYIKHVQILR--FHSRVPIVDPQ-------RINPELIQCLKEAGK 205
             + L ++++    LR    + +       R     P        R+N  L        +
Sbjct: 74  -RRGLVEIVRRTAELRPRPQISLTTNGIGLRRLA--PALAEAGLDRVNVSLDTLDAGLFR 130

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVEL 264
            +       H      + +A +     AG+  +   +VL++G+ND   +   L+R  +E 
Sbjct: 131 RLA------HRDRL-ADVLAGLEAAHRAGLHPVKVNAVLMRGVNDHEAV--PLLRFCLER 181

Query: 265 RIKPYYLHHPDLAAGTSH--FRLTIEEGQKIVASLKE---------KISGLCQP--FYIL 311
             +        +     H   R  +   ++I+A L           +  G   P   +++
Sbjct: 182 GYQ--LRFIEQMPLDAQHGWRRAQMVTAEEILAELSREFELTPEDPRTRGSA-PAETFLV 238

Query: 312 DLPGGYGKV 320
           D  GG G+V
Sbjct: 239 D--GGPGRV 245


>gi|257466298|ref|ZP_05630609.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917455|ref|ZP_07913695.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|313691330|gb|EFS28165.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 348

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 13/119 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYIQEKS--QIWEVI 148
           R+ +  +      CP +C FC ++++ G +    +  +D    +  Y++        EV 
Sbjct: 2   RHYNIPIFISHFGCPNHCVFCNQKKINGQETDIQV--EDIHRIVKEYLKTLPKKSEKEVA 59

Query: 149 FTGGDPLILSHKRLQKVLKTL-RYIKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG    LS +  ++ L+ L  YI+   +Q +R  +R     P  I  ++++ L++ G
Sbjct: 60  FFGGTFTGLSMELQREYLEALQEYIERGDIQGIRLSTR-----PDYIQKDILEQLRKYG 113


>gi|254518626|ref|ZP_05130682.1| molybdenum cofactor biosynthesis protein A [Clostridium sp.
           7_2_43FAA]
 gi|226912375|gb|EEH97576.1| molybdenum cofactor biosynthesis protein A [Clostridium sp.
           7_2_43FAA]
          Length = 323

 Score = 42.0 bits (98), Expect = 0.15,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 72/162 (44%), Gaps = 19/162 (11%)

Query: 99  LKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C   +     +K   L++ +    +     K  I +V FTGG+PL+ 
Sbjct: 14  ISLTDNCNLRCIYCMEEKNNTFLKKEDKLTNDEIYKIVCE-SAKLGIKKVRFTGGEPLVR 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
               + ++++ +  I+ ++ +   +         +  E ++ L +AG K V I++ +   
Sbjct: 73  KD--IVELMQRINTIQGIEEIYLTTNGI------LLEENVEILAKAGLKGVNISLDSLKK 124

Query: 214 NHPYEFSEE-----AIAAISRLANAGIILLSQSVLLKGINDD 250
                 +        +AAI +  + GI +   +V+++ INDD
Sbjct: 125 ETFKRLTRLGDLNKVLAAIDKCISLGIKVKLNTVMIEDINDD 166


>gi|323691989|ref|ZP_08106237.1| hypothetical protein HMPREF9475_01100 [Clostridium symbiosum
           WAL-14673]
 gi|323503912|gb|EGB19726.1| hypothetical protein HMPREF9475_01100 [Clostridium symbiosum
           WAL-14673]
          Length = 500

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 60/129 (46%), Gaps = 15/129 (11%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +YP +  + ++  C  +C +C    + G ++    + +D    +  +   S + E++ 
Sbjct: 194 ERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSR--NPEDIIREIEALVA-SGVVEIML 250

Query: 150 TGGDPLILSHKRLQ------KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
            G + +    K L+      ++L+ +  I+ ++ +RF +      P+ ++ ELI+ +K +
Sbjct: 251 LGQN-VNSYGKNLEKPITFAELLQQIEQIEGLERIRFMTSH----PKDLSDELIEVMKHS 305

Query: 204 GKPVYIAIH 212
            K +   +H
Sbjct: 306 RK-ICRHLH 313


>gi|167769111|ref|ZP_02441164.1| hypothetical protein ANACOL_00434 [Anaerotruncus colihominis DSM
           17241]
 gi|167668751|gb|EDS12881.1| hypothetical protein ANACOL_00434 [Anaerotruncus colihominis DSM
           17241]
          Length = 441

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 53/159 (33%), Gaps = 25/159 (15%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRIL--------LKLLHVCPVYCRFC----FRREMVG 119
            E+    G+     L+G      +R+L        LK+   C   C +C     R     
Sbjct: 120 GEKTVAFGEKEALSLEG------ERVLANEPYFAYLKVAEGCDNRCSYCAIPLIRGPFRS 173

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
                +++     AA    +      +    G D  +     L ++L+ L  +  V+ +R
Sbjct: 174 RPMENIVAEAQRLAACGVTELNVVAQDTTRYGED--LYGRLALPELLEKLCRLDGVRWVR 231

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPY 217
               +    P RI   L+  +    K V Y+ I   H  
Sbjct: 232 ----MLYCYPDRITDRLLDVMAREEKIVKYMDIPIQHVN 266


>gi|220927786|ref|YP_002504695.1| radical SAM protein [Clostridium cellulolyticum H10]
 gi|219998114|gb|ACL74715.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 468

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 9/94 (9%)

Query: 72  EEREDPIGDNN-HSPLKGIVHRYPDRI---LLKLLHVCPVYCRFCFRREMVGS--QKGTV 125
              +D I +   H   K I H    R+   +L++   C + C +C       +    G  
Sbjct: 57  GYLKDSILEEIVHPETKYIKHHLDHRVQFLILQVTQSCNLRCNYCTYSGNYTNRVHSGKS 116

Query: 126 LSSKDTEAALAYIQEK-SQIWEVIFT--GGDPLI 156
           +S +  + ++ Y+ +  ++I +V  +  GG+PL+
Sbjct: 117 MSWELAKKSIDYLYDHSNEIEKVRISFYGGEPLL 150


>gi|325290900|ref|YP_004267081.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
 gi|324966301|gb|ADY57080.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271]
          Length = 296

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 80/239 (33%), Gaps = 39/239 (16%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           H+Y  RI L +   C + C+FC R         G     +   K  E     ++   +I 
Sbjct: 28  HKY-GRIHLPVSPRCNIQCKFCKRSLNKFENRPGVAGSILTPEKALEVVDKALELCPEIT 86

Query: 146 EVIFTG-GDPLILSHKRLQKV---------------LKTLRYIKHV-QILRFHSRVPIVD 188
            V   G GD L  +   L                     L   ++V +I++   +   V 
Sbjct: 87  VVGIAGPGDTL-ATPHALDTFQLVHEKYPDLIKCLSTNGLLLRENVNRIVKAGVKTVTVT 145

Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA----ISRLANAGIILLSQSVLL 244
              ++PE    LK     ++      +  E +   + A    I +++  GI++   +VL+
Sbjct: 146 VNAVDPE---ILKNICSYIFYNGQLINGKEAALWLLEAQLAGIKKISERGIVVKINTVLI 202

Query: 245 KGINDD--PEILANLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
             IN+    E+           + I P            S FR+   E   +     E+
Sbjct: 203 PEINNGHVGEVARVTSAAGASTINIIP-----LIPQNEMSDFRVPNCEELNVEREAAER 256


>gi|257438968|ref|ZP_05614723.1| radical SAM domain protein [Faecalibacterium prausnitzii A2-165]
 gi|257198553|gb|EEU96837.1| radical SAM domain protein [Faecalibacterium prausnitzii A2-165]
          Length = 487

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C +CF  +     +  ++S +  + A+ ++ E S      EV F GG+PL
Sbjct: 107 LHVAHTCNLNCSYCFASQGRYQGERALMSFEVGKRAMDFLIENSGSRRNLEVDFFGGEPL 166

Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           +     K+L    +    I H +  RF       +   I+ ++I    +    V +++
Sbjct: 167 MNFDMVKKLVAYCREQEKI-HNKNFRF---TMTTNGMLIDDDVIDFCNKECHNVVLSL 220


>gi|237741210|ref|ZP_04571691.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|256846346|ref|ZP_05551803.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
 gi|229430742|gb|EEO40954.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 4_1_13]
 gi|256718115|gb|EEU31671.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. 3_1_36A2]
          Length = 348

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 15/124 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
           ++ +  +      CP  C FC ++++ G +    +S  D +  +  Y++      I +V 
Sbjct: 2   KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59

Query: 149 FTGGDPLI-LSHKRLQKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG     +S    ++ L+ ++  I +  V+ +R  +R     P+ I+ E++  LK+ G
Sbjct: 60  FFGG-TFTGISMDLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113

Query: 205 KPVY 208
               
Sbjct: 114 VKTI 117


>gi|160942971|ref|ZP_02090209.1| hypothetical protein FAEPRAM212_00448 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445665|gb|EDP22668.1| hypothetical protein FAEPRAM212_00448 [Faecalibacterium prausnitzii
           M21/2]
          Length = 431

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 18/119 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  +K+   C   C +C      G  +    + +   A L  +   +   EV+ +   
Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--AEESILAELHQLAA-AGYREVVLSAIS 197

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D        L ++++    +  ++ +R  S    +DP  + PE I  L    K
Sbjct: 198 LPSYGLDTGT----NLVELVEKCAQVPGIERIRLGS----LDPDMLTPEFISRLAAVDK 248


>gi|116749020|ref|YP_845707.1| MiaB-like tRNA modifying enzyme YliG [Syntrophobacter fumaroxidans
           MPOB]
 gi|238066613|sp|A0LIM0|RIMO_SYNFM RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|116698084|gb|ABK17272.1| MiaB-like tRNA modifying enzyme YliG [Syntrophobacter fumaroxidans
           MPOB]
          Length = 444

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 10/118 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGT----VLSSKDTEAALAYIQEKSQIWEVIF 149
                +K+   C   C FC    + G  +      +L       A    +      +   
Sbjct: 146 RSSAYVKIAEGCGNRCAFCLIPRLRGPYRSRRAVDILREAHRLVACGAKELNIVAQDTTA 205

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
            G D        L  +L++L  I+ ++ +R         P RI PELI+ + ++ K V
Sbjct: 206 FGSD--RGEEHALVSLLESLEEIEKLEWVRL----LYAYPDRITPELIRTMSQSRKVV 257


>gi|34764314|ref|ZP_00145148.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27885914|gb|EAA23256.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 320

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 15/124 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
           ++ +  +      CP  C FC ++++ G +    +S  D +  +  Y++      I +V 
Sbjct: 2   KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59

Query: 149 FTGGDPLI-LSHKRLQKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG     +S    ++ L+ ++  I +  V+ +R  +R     P+ I+ E++  LK+ G
Sbjct: 60  FFGG-TFTGISMDLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113

Query: 205 KPVY 208
               
Sbjct: 114 VKTI 117


>gi|295103489|emb|CBL01033.1| MiaB-like tRNA modifying enzyme [Faecalibacterium prausnitzii
           SL3/3]
          Length = 431

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 18/119 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  +K+   C   C +C      G  +    + +   A L  +   +   EV+ +   
Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--AEESILAELHQLAA-AGYREVVLSAIS 197

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D        L ++++    +  ++ +R  S    +DP  + PE I  L    K
Sbjct: 198 LPSYGLDTGT----NLVELVEKCAQVPGIERIRLGS----LDPDMLTPEFISRLAAVDK 248


>gi|237714068|ref|ZP_04544549.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. D1]
 gi|262407119|ref|ZP_06083668.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 2_1_22]
 gi|294644009|ref|ZP_06721789.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides ovatus SD CC 2a]
 gi|294810385|ref|ZP_06769043.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides xylanisolvens SD CC 1b]
 gi|229445892|gb|EEO51683.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. D1]
 gi|262355822|gb|EEZ04913.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. 2_1_22]
 gi|292640646|gb|EFF58884.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides ovatus SD CC 2a]
 gi|294442412|gb|EFG11221.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides xylanisolvens SD CC 1b]
          Length = 152

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            C  +C  C   E      G  L+ +  ++ +  I+    +  V F+GGDP       L
Sbjct: 25  GCSHHCPGCHNPESWNPGAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEAFL 83


>gi|315058449|gb|ADT72778.1| MiaB family protein [Campylobacter jejuni subsp. jejuni S3]
          Length = 416

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 18/132 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     +  +L   +   A  Y        E++ 
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184

Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +     L +   L K+L+ +  I  ++ +R  S    ++P +++   ++ L EA   
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRLGS----LEPAQLDESFLEILDEAWLE 240

Query: 207 VYIAIHANHPYE 218
            ++ I   H  E
Sbjct: 241 RHLHIALQHTSE 252


>gi|289578146|ref|YP_003476773.1| radical SAM protein [Thermoanaerobacter italicus Ab9]
 gi|289527859|gb|ADD02211.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9]
          Length = 304

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 15/117 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           ++L + C + C +C+++ ++GS+   +L  K  +  +  +     +  VI  GG+PL+  
Sbjct: 9   IELTNRCNLDCIYCYKK-VIGSRNDDILPEKAIDIIVENLGSNPAVL-VILEGGEPLLHP 66

Query: 159 HKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
                + ++    +K     V IL   +   +  P+ I  +L +   +    V I++
Sbjct: 67  -----RFIEIFYKLKEYSVAVDILTNGT---LFTPE-IVHDLAKIFSQKYDSVQISL 114


>gi|205356717|ref|ZP_03223478.1| hypothetical protein Cj8421_1025 [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205345455|gb|EDZ32097.1| hypothetical protein Cj8421_1025 [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 354

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 18/132 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     +  +L   +   A  Y        E++ 
Sbjct: 70  HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 122

Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +     L +   L K+L+ +  I  ++ +R  S    ++P +++   ++ L EA   
Sbjct: 123 TGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRLGS----LEPAQLDESFLEILDEAWLE 178

Query: 207 VYIAIHANHPYE 218
            ++ I   H  E
Sbjct: 179 RHLHIALQHTSE 190


>gi|149914618|ref|ZP_01903148.1| arginyl-tRNA-protein transferase [Roseobacter sp. AzwK-3b]
 gi|149811411|gb|EDM71246.1| arginyl-tRNA-protein transferase [Roseobacter sp. AzwK-3b]
          Length = 317

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 20/158 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ----IWEVIF 149
           P+ +      +C + C  C+      + +   +++   +  L Y+ + ++    I E+ F
Sbjct: 34  PETLWFNTGTLCNITCANCYIESSPTNDRLVYITA---DEVLDYLDQITERGWPIREIGF 90

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           TGG+P  ++ + +      L     V IL    R P++    +   L+   K     + +
Sbjct: 91  TGGEPF-MNPEMISMTRACLERGYEVLILTNAMR-PMMRKS-VKAGLLDLAKTWRDTLTL 147

Query: 210 AIHANHPYEFSEE----------AIAAISRLANAGIIL 237
            I  +H  E   +           I  +  L +AGI +
Sbjct: 148 RISVDHWSEVRHDEERGKDAFKRTIEGMCWLRDAGIRM 185


>gi|57237831|ref|YP_179079.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni RM1221]
 gi|88596372|ref|ZP_01099609.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|148926084|ref|ZP_01809770.1| hypothetical protein Cj8486_1074 [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|218562622|ref|YP_002344401.1| putative MiaB-like tRNA modifying enzyme [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|57166635|gb|AAW35414.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni RM1221]
 gi|88191213|gb|EAQ95185.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360328|emb|CAL35124.1| putative MiaB-like tRNA modifying enzyme [Campylobacter jejuni
           subsp. jejuni NCTC 11168]
 gi|145845563|gb|EDK22655.1| hypothetical protein Cj8486_1074 [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|284926236|gb|ADC28588.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           IA3902]
 gi|315928365|gb|EFV07680.1| RNA modification enzyme, MiaB family protein [Campylobacter jejuni
           subsp. jejuni DFVF1099]
          Length = 416

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 18/132 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     +  +L   +   A  Y        E++ 
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184

Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +     L +   L K+L+ +  I  ++ +R  S    ++P +++   ++ L EA   
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRLGS----LEPAQLDESFLEILDEAWLE 240

Query: 207 VYIAIHANHPYE 218
            ++ I   H  E
Sbjct: 241 RHLHIALQHTSE 252


>gi|253582208|ref|ZP_04859431.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
 gi|251835747|gb|EES64285.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725]
          Length = 469

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 30/149 (20%), Positives = 52/149 (34%), Gaps = 15/149 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +          L+ ++    +  +++       +  G DP+  S
Sbjct: 87  LYVSNYCVNNCEYCGYKHDNDELSRKKLNREELIEEVKSLEKLGHKRIALEAGEDPINCS 146

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE------------AGKP 206
              L  +L  ++ I  ++      R   V+      E  + LKE              KP
Sbjct: 147 ---LDYILDCIKDIYSIKFKNGSIRRINVNIAATTVENYKRLKEAEIGTYILFQETYHKP 203

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI 235
            Y  +H N P    E    A+ R   AGI
Sbjct: 204 TYERVHLNGPKRDYEYHTTAMFRAREAGI 232


>gi|83721219|ref|YP_442241.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           thailandensis E264]
 gi|167619209|ref|ZP_02387840.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           thailandensis Bt4]
 gi|257138434|ref|ZP_05586696.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           thailandensis E264]
 gi|83655044|gb|ABC39107.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           thailandensis E264]
          Length = 370

 Score = 41.6 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R + G          +L+ ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99

Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
           PL+   K ++ +++ L  +  V
Sbjct: 100 PLL--RKNIEFLIERLAKMTTV 119


>gi|328954329|ref|YP_004371663.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
 gi|328454653|gb|AEB10482.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
          Length = 511

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 29/190 (15%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           SP+  +  RY +   L +   C + CR C+    +G      L        L   QE   
Sbjct: 206 SPIPSL--RYLE---LMITERCNLRCRHCY----LGEVGEAELPLDAVLQTLQEFQEMQG 256

Query: 144 IWEVIFTGGDPLILS-HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           +  V+ +GG+PL+    + L   L           LRF   V + +   +  ++I+ L+ 
Sbjct: 257 LR-VLLSGGEPLMHRHWQELNNHLPEFE-------LRF---VLLSNGLLLTDKVIEALRV 305

Query: 203 AGKPVYI-AIHANHPYEFSE----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
               + +  +   H          + +  +  L +AG  +   +++ +G   +   LA +
Sbjct: 306 HEVQLSLDGLEPGHDLLRGPGTWKKTVDRMQALQSAGFEVSVATMIHRG---NVAELAEM 362

Query: 258 MRTFVELRIK 267
            R   +  ++
Sbjct: 363 SRWLQQAEVR 372


>gi|160873411|ref|YP_001552727.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
           OS195]
 gi|160858933|gb|ABX47467.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
           OS195]
 gi|315265640|gb|ADT92493.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
           OS678]
          Length = 337

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +  VC   C +C         K   LS  + E  ++   +     ++  TGG+P +  
Sbjct: 28  MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
                 +++ +         R H+     +  R+     +      + + +++ +  P  
Sbjct: 87  D--FTDIIRVVADNP-----RIHTIATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139

Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
             + +      E +  I    +AG   +   +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179


>gi|306821073|ref|ZP_07454691.1| MiaB family tRNA modification enzyme [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550909|gb|EFM38882.1| MiaB family tRNA modification enzyme [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 452

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 38/147 (25%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT 150
              R  +K+   C  YC +C     +       + S++    +  +Q    +   EV+ T
Sbjct: 142 KNTRAFVKIQDGCDRYCSYC-----IIPYTRGRIRSRNIGDIVKEVQSLSDNGYKEVVLT 196

Query: 151 G------------------------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           G                         D  I     L  V++ +  IK +  +R  S    
Sbjct: 197 GIHIASYGKDLKKSKDKLIPIIHSQKDDFIQEDISLIDVIEEVSKIKDIHRVRIGS---- 252

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHA 213
           V+P  I+ + +Q L +  K      H 
Sbjct: 253 VEPIIISDDFLQRLTKIEK---FCPHF 276


>gi|325681387|ref|ZP_08160913.1| ribosomal protein S12 methylthiotransferase RimO [Ruminococcus
           albus 8]
 gi|324106877|gb|EGC01167.1| ribosomal protein S12 methylthiotransferase RimO [Ruminococcus
           albus 8]
          Length = 443

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 20/160 (12%)

Query: 79  GDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           G     P++G  I+   P    +K+   C   C +C    + G  K      +D      
Sbjct: 128 GSKTDLPMEGGRIISTEPFYAYIKIAEGCSNNCTYCAIPAIRG--KFRSRKMEDILEEAR 185

Query: 137 YIQEKSQIWEVIFT------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
           ++ E      V+        G D  I    +L ++L+ L  I   + +R         P+
Sbjct: 186 WLAENGVTELVVIAQDTTRYGED--IYGKSKLPELLRELCKIDGFKWIR----TLYSYPE 239

Query: 191 RINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISR 229
           RI+ E I  L    K V YI +   H    + + + +++R
Sbjct: 240 RISEEFIDVLASEEKLVKYIDMPIQH---CNGDVLRSMNR 276


>gi|113868543|ref|YP_727032.1| molybdenum cofactor biosynthesis protein A [Ralstonia eutropha H16]
 gi|113527319|emb|CAJ93664.1| molybdopterin biosynthesis protein [Ralstonia eutropha H16]
          Length = 374

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 48/214 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+            +LS ++ E           + ++  TGG+
Sbjct: 47  ISVTDRCNFRCVYCMPKEVFDKDYTFLPHSELLSFEEIERTARLFVAH-GVEKIRLTGGE 105

Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191
           PL+   K ++ +++ L  I+ V                    + LR    +RV +     
Sbjct: 106 PLL--RKNIEHLVEMLAKIETVSGKPLDLTLTTNASLLARKARALRDAGLTRVSVSL-DA 162

Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
           I+    + + +    V   +H         E   A+         +    V+ +G ND  
Sbjct: 163 IDDATFRRMNDVDFAVADVLH-------GIETAQAVGL-----APIKVNMVVKRGTND-- 208

Query: 252 EILANLMRTFVELRIKPYYLHHP-DLAAGTSHFR 284
           + +  + R F    I              ++H++
Sbjct: 209 QEIVPMARHFRNSGII--LRFIEFMDVGASNHWQ 240


>gi|91774113|ref|YP_566805.1| molybdenum cofactor biosynthesis protein A [Methanococcoides
           burtonii DSM 6242]
 gi|91713128|gb|ABE53055.1| Molybdenum cofactor biosynthesis protein A [Methanococcoides
           burtonii DSM 6242]
          Length = 318

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 31/176 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + + + C + C +C      G +      S  T + +     K  + +V F+GG+PL+  
Sbjct: 21  ISITNRCNLDCIYC---HSEGDEGSRKEMSAKTISVIVSAAAKFGVNKVKFSGGEPLVRK 77

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK------------- 205
               + +L+ L  +K V +        +   +R        LKEAG              
Sbjct: 78  D--FEDILRKLPKLKDVSVTTNG----VFLKERAFS-----LKEAGLDRVNVSLDTLDPE 126

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN-DDPEILANLMR 259
                 H +   E   + +  I    +AG+  +    VLLKGIN D+   + +L+R
Sbjct: 127 KYAYITHGS--PETLHKVLEGIDAAISAGLTPVKLNMVLLKGINEDEIGDMLDLVR 180


>gi|310658985|ref|YP_003936706.1| hypothetical protein CLOST_1681 [Clostridium sticklandii DSM 519]
 gi|308825763|emb|CBH21801.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 442

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 15/146 (10%)

Query: 66  ELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           EL        D   D    S    +  +Y     LK+   C   C +C   ++ G  +  
Sbjct: 118 ELGENNSLILDINHDLKPDSKRSLLTEKY--TAFLKIAEGCDNLCTYCIIPKLRGKYRSR 175

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGD----PL-ILSHKRLQKVLKTLRYIKHVQILR 179
            L  +D       +   S + E+I    D     L I + K L ++L+ L  I+ +  +R
Sbjct: 176 KL--EDIVKEAKVLAA-SGVKEIIVIAQDTTKYGLDIYNEKSLPRLLRELNAIEDLNWIR 232

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGK 205
           F        P+ I+ +LI  +KE+ K
Sbjct: 233 F----LYSYPEDIDLDLILTVKESDK 254


>gi|300869794|ref|YP_003784665.1| molybdenum cofactor biosynthesis protein A [Brachyspira pilosicoli
           95/1000]
 gi|300687493|gb|ADK30164.1| molybdenum cofactor biosynthesis protein A [Brachyspira pilosicoli
           95/1000]
          Length = 265

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 12/109 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDPLI 156
           + +   C + C +C   E  G +K T       E     ++E ++  + +V  TGG+PL+
Sbjct: 14  VSVTDRCNLRCVYCMPEE--GIEKKTHNEILSYEQIYNVVKESAELGVKKVRLTGGEPLV 71

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
              K + +++  +R +K+++ +   +   I+ P      + + LK+AG 
Sbjct: 72  --RKNIDELVAMIRTLKNIETIAMTTNALILSP------IAERLKKAGL 112


>gi|297200519|ref|ZP_06917916.1| radical SAM domain-containing protein [Streptomyces sviceus ATCC
           29083]
 gi|297147672|gb|EFH28704.1| radical SAM domain-containing protein [Streptomyces sviceus ATCC
           29083]
          Length = 401

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 31/158 (19%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIW-----EVIF 149
           LLK+   C + C +C+  E V      +   ++      A A I E ++       +V+ 
Sbjct: 8   LLKIHSRCNLACDYCYVYESVDQSWRDRPRTMAPGVVRRAAALIAEHAREHALSEVQVVL 67

Query: 150 TGGDPLILSHKRLQKVLKTLR-YIKHVQILRF-----HSRVPIVDPQRINPELIQCLKEA 203
            GG+PL++  +RL  VL+ L   +  V  LR        R+        +P L+  L   
Sbjct: 68  HGGEPLLVGAERLDAVLRELAGALDGVAELRLNLQTNGLRLVE------DPALLPVLARH 121

Query: 204 GKPVYI------AIHANHPYE-----FSEEAIAAISRL 230
           G  V +      A H  H           +   A+  L
Sbjct: 122 GVRVGVSLDGTPATHDRHRRRPGGSGSHADVARALRLL 159


>gi|210612282|ref|ZP_03289230.1| hypothetical protein CLONEX_01431 [Clostridium nexile DSM 1787]
 gi|210151656|gb|EEA82663.1| hypothetical protein CLONEX_01431 [Clostridium nexile DSM 1787]
          Length = 440

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 12/114 (10%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQI----WEVIFTG 151
             LK+   C  +C +C     +     +V   +  + A   + +   +I     E    G
Sbjct: 146 AYLKIAEGCDKHCTYCII-PKIRGNFRSVPIERLLKEAEDLVAQGVKEIILVAQETTLYG 204

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            D  +   K L K+L+ L  I  ++ +R         P+ I  ELIQ +KE  K
Sbjct: 205 KD--LYGEKSLHKLLRELCKISGLRWIRI----LYCYPEEITDELIQVIKEEDK 252


>gi|218283069|ref|ZP_03489164.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989]
 gi|218216138|gb|EEC89676.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989]
          Length = 464

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 63/141 (44%), Gaps = 13/141 (9%)

Query: 80  DNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           ++ + P+ G +      ++    L + H C + C +CF  +        ++S +  + AL
Sbjct: 78  EDTYEPMAGQLKAKTSGVIKALCLHIAHTCNLNCSYCFASQGKYHGDRALMSFETGKRAL 137

Query: 136 AYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQ 190
            ++ E S      EV F GG+PL ++   +++++   R I+    +  RF       +  
Sbjct: 138 DFLVENSGTRRNLEVDFFGGEPL-MNFDVVKQLVAYARSIEKEAGKNFRF---TLTTNGM 193

Query: 191 RINPELIQCLKEAGKPVYIAI 211
            I+ ++I+   +    V +++
Sbjct: 194 LIDDDVIEFANKEMSNVVLSL 214


>gi|319424662|gb|ADV52736.1| molybdenum cofactor biosynthesis protein A [Shewanella putrefaciens
           200]
          Length = 337

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +  VC   C +C         K   LS  + E  ++   +     ++  TGG+P +  
Sbjct: 28  MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
                 +++ +         R H+     +  R+     +      + + +++ +  P  
Sbjct: 87  D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139

Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
             + +      E +  I    +AG   +   +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179


>gi|325289811|ref|YP_004265992.1| protein of unknown function DUF512 [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965212|gb|ADY55991.1| protein of unknown function DUF512 [Syntrophobotulus glycolicus DSM
           8271]
          Length = 445

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 47/227 (20%), Positives = 74/227 (32%), Gaps = 82/227 (36%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C   C FCF R+M    + ++    D      Y         +  T G  + LS+    
Sbjct: 91  RCRNNCVFCFVRQMPQGLRKSLYDKDD-----DY--------RLSVTQGSYITLSN---- 133

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP------- 216
                L     ++ILR H                        P+Y+++HA +P       
Sbjct: 134 -----LTEKDFLRILRLHIS----------------------PLYLSVHAWNPAARKKLM 166

Query: 217 -YEFSEEAIAAISRLANAGIILLSQSVLLKGIN------DDPEILANLMRTFVELRIKPY 269
               +      I RL    I L +Q VL+ G N      D    LA L  +   + + P 
Sbjct: 167 KNSRAALLPEQIQRLVEGRITLHTQIVLVPGYNDGEILWDTVNHLAELYPSVQSVGVVP- 225

Query: 270 YLHHPDLAAGTSHFR--LT-------------IEEGQKIVASLKEKI 301
                    G + FR  L              +EEG K+  +L+++ 
Sbjct: 226 --------VGLTKFREGLPLLRTVTRKEAEMILEEGTKLQETLRQRT 264


>gi|323483386|ref|ZP_08088774.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14163]
 gi|323691115|ref|ZP_08105395.1| radical SAM domain-containing protein [Clostridium symbiosum
           WAL-14673]
 gi|323403240|gb|EGA95550.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14163]
 gi|323504812|gb|EGB20594.1| radical SAM domain-containing protein [Clostridium symbiosum
           WAL-14673]
          Length = 291

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 27/168 (16%)

Query: 87  KGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDT----EAALAYI 138
           +G+V+R P      ++++   C    C FC    M   ++  V   ++     + A    
Sbjct: 4   EGVVYRPPSEARSLIVQVTIGCAHNTCTFC---NMYKDKQFRVRKMEEIMADLQEAHDAY 60

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQIL-RFHSRVPIVDPQRINPEL 196
                + +V    GD LI+  + L  +L  ++ +   V  +  + +   I+   R + E 
Sbjct: 61  AAY--VQKVFLADGDALIMKTEDLLTILAAVKELFPRVTRVAAYGTAQDIL---RKSEEE 115

Query: 197 IQCLKEAGKPVYIA---------IHANHPYEFSEEAIAAISRLANAGI 235
           ++ LKEAG  +            +   H    + E IAA  +L   GI
Sbjct: 116 LRLLKEAGLGIVYVGAETGDDEILEYIHKGVTAGEVIAAGQKLKRCGI 163


>gi|138896073|ref|YP_001126526.1| Fe-S oxidoreductase [Geobacillus thermodenitrificans NG80-2]
 gi|196248967|ref|ZP_03147667.1| RNA modification enzyme, MiaB family [Geobacillus sp. G11MC16]
 gi|134267586|gb|ABO67781.1| Fe-S oxidoreductase [Geobacillus thermodenitrificans NG80-2]
 gi|196211843|gb|EDY06602.1| RNA modification enzyme, MiaB family [Geobacillus sp. G11MC16]
          Length = 449

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 19/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C FC      G  + +    +    A   +       E++ T   
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPQEIIRQARQLVAA--GYKEIVLTGIH 198

Query: 151 ----GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D   L       +L+ L   +  ++ +R  S    ++  ++  E+I  L+ + K
Sbjct: 199 TGGYGTD---LKDYNFAALLRDLDEQVPGLKRIRISS----IEASQLTDEVIDVLRRSDK 251

Query: 206 PVYIAIHA 213
            +   +H 
Sbjct: 252 -IVRHLHI 258


>gi|323483779|ref|ZP_08089159.1| hypothetical protein HMPREF9474_00908 [Clostridium symbiosum
           WAL-14163]
 gi|323402970|gb|EGA95288.1| hypothetical protein HMPREF9474_00908 [Clostridium symbiosum
           WAL-14163]
          Length = 436

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 29/135 (21%)

Query: 94  PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  +K+   C  +C +C     R  +     G V+   +  AA  Y        E++ 
Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRAIGDVVKEVEGLAAAGY-------KEIVL 194

Query: 150 TGGDPLILS----------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
           TG     LS           + L  ++  L  I+ ++ +R  S    ++P+ I  E +  
Sbjct: 195 TGI---HLSSYGVDFPEEKRENLLSLITCLDKIQGIERIRLGS----LEPRIITEEFVSA 247

Query: 200 LKEAGKPVYIAIHAN 214
           L    K +    H +
Sbjct: 248 LAGL-KSICPHFHLS 261


>gi|313888496|ref|ZP_07822163.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312845525|gb|EFR32919.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 349

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 19/120 (15%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPL 155
           +    + CP  C FC +R++ G       S  + +  L Y+   ++    EV F GG   
Sbjct: 9   IFIPHYGCPNDCVFCNQRKITGMSTDISNSDVE-DTILEYLSYFKRKDNVEVAFYGG--- 64

Query: 156 ILSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
             +   L++       + H       V+ +R  +R     P  I+  +++ LK+ G  + 
Sbjct: 65  SFTAIPLEE-QSEFLKVAHSYKEKGLVKYIRLSTR-----PDAIDDRILENLKKYGVDII 118


>gi|15644072|ref|NP_229121.1| astB/chuR-related protein [Thermotoga maritima MSB8]
 gi|148270594|ref|YP_001245054.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1]
 gi|157364077|ref|YP_001470844.1| radical SAM domain-containing protein [Thermotoga lettingae TMO]
 gi|170289295|ref|YP_001739533.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
 gi|222100244|ref|YP_002534812.1| Radical SAM domain protein [Thermotoga neapolitana DSM 4359]
 gi|281412902|ref|YP_003346981.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
 gi|4981877|gb|AAD36391.1|AE001786_4 astB/chuR-related protein [Thermotoga maritima MSB8]
 gi|147736138|gb|ABQ47478.1| Radical SAM domain protein [Thermotoga petrophila RKU-1]
 gi|157314681|gb|ABV33780.1| Radical SAM domain protein [Thermotoga lettingae TMO]
 gi|170176798|gb|ACB09850.1| Radical SAM domain protein [Thermotoga sp. RQ2]
 gi|221572634|gb|ACM23446.1| Radical SAM domain protein [Thermotoga neapolitana DSM 4359]
 gi|281374005|gb|ADA67567.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
          Length = 463

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 30/195 (15%), Positives = 67/195 (34%), Gaps = 30/195 (15%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R+ L +  VC + CR+C+         G  +        L +      +  +   GG+PL
Sbjct: 83  RLALNVSQVCRLKCRYCYANAGTYGNPG-FMKRNVLVRTLDFFLSNYNVHNIHIFGGEPL 141

Query: 156 ILSHKRLQKVLKTLRY-----IKHVQILRFHSRVPIVD-----PQRINPELIQCLKEAGK 205
            L+ + ++++ + L         +++ +   + + + +       +I             
Sbjct: 142 -LNIEMIEEMFRILTSKYAKKFNNLR-ITVATSLFVSEETINRFIKIYESYKDKF----- 194

Query: 206 PVYIAIHANHPYEFSEEAIAAIS------RLANAGIILLSQSVLLKGINDDPE-ILANLM 258
            +Y+ +  + P E  +    ++             I LL Q    KG +   E     L 
Sbjct: 195 QIYMVVSLDGPKEIQDNTRPSLDSKSSSFDRIKNNINLLKQ----KGFSISFEVTYTKLH 250

Query: 259 RTFVELRIKPY-YLH 272
           +      +K Y Y +
Sbjct: 251 KQLGWNILKIYKYFY 265


>gi|87307866|ref|ZP_01090009.1| astB/chuR-related protein [Blastopirellula marina DSM 3645]
 gi|87289480|gb|EAQ81371.1| astB/chuR-related protein [Blastopirellula marina DSM 3645]
          Length = 355

 Score = 41.6 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 39/191 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + H C + C +C+  E +          K  + A+  ++    + E+ F GG+PLI  
Sbjct: 9   LVVNHACNLRCTYCYTGEKIRRPMSPETGRKAIDRAIRSVRRDGTL-ELSFFGGEPLI-E 66

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRV-------------PIVDPQRINPELIQCLKEAGK 205
            + +  +++  R     Q +R    +              +  PQ     L   +   G 
Sbjct: 67  AELILDLVRYARSAADEQDVRLALSMTTNGTIESAAAWSVMTLPQ-----LELAISHDGL 121

Query: 206 PVYIAIHANHPYEFSEE-----AIAAISRLANAG----IILLSQSVLLKGINDDPEILAN 256
           P   + H  H                ++RL +AG    I+++ Q        D    L +
Sbjct: 122 P---SAHDGHRVTVDGLPSSFRVQNTMARLIDAGKEFRIVMVVQP-------DSVASLPD 171

Query: 257 LMRTFVELRIK 267
            M     L ++
Sbjct: 172 GMEFLYTLGVR 182


>gi|224368605|ref|YP_002602768.1| HemN1 [Desulfobacterium autotrophicum HRM2]
 gi|223691321|gb|ACN14604.1| HemN1 [Desulfobacterium autotrophicum HRM2]
          Length = 291

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 35/162 (21%)

Query: 95  DRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGG 152
           + +LL++   C    C FC    M    K ++ S +  E  L   +     +  V    G
Sbjct: 15  NSLLLQVTVGCTHNKCTFCT---MYKDTKFSIESLEQIEEDLKEARALYGDVKRVFLVNG 71

Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILR-------FHSRVPIVDPQRINPELIQCLKEAG 204
           D  +LS  RL+ ++K +      V+++          S+           + ++ L++  
Sbjct: 72  DAFVLSANRLKPIVKLIIQYFPDVKVITMYASINNIKSK---------TDQELEELRDLR 122

Query: 205 -KPVYIAIHANHPYEFSEE----------AIAAISRLANAGI 235
              ++I     H  E + E          +   + RL  AGI
Sbjct: 123 INDLWIGTETGH--EETLEYMNKGFSLKDSYEQLERLNKAGI 162


>gi|332877549|ref|ZP_08445296.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332684655|gb|EGJ57505.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 447

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 71/190 (37%), Gaps = 32/190 (16%)

Query: 56  IARQFIPQKEELNILPEERE--DPIGDNNHSPLKGIVHRY--------PDRILLKLLHVC 105
           I R     +E L +LP ER+  D   +    P K I H +          R  LK+   C
Sbjct: 113 ILRY---LEERLPLLPAERKLADAEHEAYTVPTKDI-HTFVPSCSCGDRTRYFLKVQDGC 168

Query: 106 PVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG---GDPLILSHK 160
             YC +C      G  +   ++S  +  E A           E++ TG   GD    + +
Sbjct: 169 DYYCTYCTIPYARGRSRNGSIASLVRQAEQA-----ASEGGREIVLTGVNIGDFGKTTGE 223

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEF 219
               ++K L  ++ +   R  S    ++P  +  E++    E+        H + P    
Sbjct: 224 SFLDLVKALDRVEGIARYRISS----IEPNLLTEEVLAYCAESR---AFMPHFHIPLQSG 276

Query: 220 SEEAIAAISR 229
           S+E +  + R
Sbjct: 277 SDEVLKLMRR 286


>gi|312880310|ref|ZP_07740110.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Aminomonas paucivorans
           DSM 12260]
 gi|310783601|gb|EFQ23999.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Aminomonas paucivorans
           DSM 12260]
          Length = 446

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 26/122 (21%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151
           R  + + H C  +C +C     +         S+D EA L  ++      + E+   G  
Sbjct: 147 RAYVTIAHGCDHFCAYC-----IVPYVRGRFQSRDPEAILREVRCLADRGVREITLLGQN 201

Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                    D          ++L+ +  +  V  +R+ +  P+      + EL++ + E 
Sbjct: 202 VNRFGVDRSDGFSFP-----RLLREVAEVPGVLRVRYATSHPVD----FSEELVRVMAEH 252

Query: 204 GK 205
            +
Sbjct: 253 PR 254


>gi|300853988|ref|YP_003778972.1| putative oxidoreductase [Clostridium ljungdahlii DSM 13528]
 gi|300434103|gb|ADK13870.1| predicted oxidoreductase [Clostridium ljungdahlii DSM 13528]
          Length = 463

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 48/129 (37%), Gaps = 19/129 (14%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF 149
           +   R  LK+   C  +C +C             + SK  +  +  ++   ++   E+I 
Sbjct: 164 QKRTRAFLKIQDGCNRFCSYC-----AIPFARGAVCSKSPDKIIEEVEKLSRNNFKEIIL 218

Query: 150 TGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           +G               L ++L+ +  +K +  +R  S    +DPQ     +I+ + +  
Sbjct: 219 SGIHIASYGTDIDGDWNLLRILQEIDKVKGIDRVRIGS----IDPQFFTEGVIEKMSKLE 274

Query: 205 KPVYIAIHA 213
           K   +  H 
Sbjct: 275 K---LCPHF 280


>gi|167581126|ref|ZP_02374000.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           thailandensis TXDOH]
          Length = 370

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R + G          +L+ ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99

Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
           PL+   K ++ +++ L  +  V
Sbjct: 100 PLL--RKNIEFLIERLAKMTTV 119


>gi|194366021|ref|YP_002028631.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas
           maltophilia R551-3]
 gi|226707388|sp|B4SL67|MOAA_STRM5 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|194348825|gb|ACF51948.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas
           maltophilia R551-3]
          Length = 326

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 13/175 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L L   C   C +C         +   L   +    +        + ++  TGG+P +  
Sbjct: 17  LSLTEACNFRCSYCLPDGYQVDGRPRFLQVDEIARLVRAFAA-LGMSKIRLTGGEPSLRK 75

Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHA 213
              L +++ T+     ++ +      + +P   P   R     +    ++ +        
Sbjct: 76  D--LDEIIATVAAAPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFRTIT 133

Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDD--PEILANLMRTFVELR 265
            H      E    ++     G+  +   +VLL+G+NDD  P+ +  L      +R
Sbjct: 134 GHDR--LPEIEQGLALAQALGLPAIKLNAVLLRGLNDDELPQWMDYLRDRPFSVR 186


>gi|262041408|ref|ZP_06014612.1| arylsulfatase-activating protein AtsB [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259041262|gb|EEW42329.1| arylsulfatase-activating protein AtsB [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 395

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 46/232 (19%), Positives = 84/232 (36%), Gaps = 34/232 (14%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135
           P+     SP+   +   P      +   C + CR+C+       +K    +     E  +
Sbjct: 13  PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDEKPVNKMDDARLEQFI 63

Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189
             YI  +     +I   ++ GG+PL+      +K L    RY      +   S     + 
Sbjct: 64  RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119

Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242
             IN    +  +E G  + +++  N   + +        S  + A  GI LL Q  V   
Sbjct: 120 TLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVDFN 179

Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           LL  + N+     A +    V L  + Y    P ++ G +     + EG ++
Sbjct: 180 LLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225


>gi|229102501|ref|ZP_04233207.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28]
 gi|228680891|gb|EEL35062.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28]
          Length = 383

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 65/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 15  PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 71  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 121

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H     E  +  + AI  L    I +   +V+     D  + +A L+  
Sbjct: 122 SLDGPTAEIHDHFRGTEESFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLKEMAMLIEE 181

Query: 261 F 261
            
Sbjct: 182 L 182


>gi|283797908|ref|ZP_06347061.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
 gi|291074375|gb|EFE11739.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1]
 gi|295091886|emb|CBK77993.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium cf.
           saccharolyticum K10]
          Length = 483

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 66/152 (43%), Gaps = 20/152 (13%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           + I   +  D I ++  S       +YP +  + ++  C  +C +C    + G ++    
Sbjct: 167 MVIDIWKDTDKIVEDLPS-----ERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSRRP 221

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL------QKVLKTLRYIKHVQILRF 180
             +D    +  +     + EV+  G + +    K L       ++L+ +  I+ ++ +RF
Sbjct: 222 --EDIIKEIEGLVAD-GVVEVMLLGQN-VNSYGKNLPEPITFAELLRRVEQIEGLERIRF 277

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            +      P+ ++ ELI+ ++++ K +   +H
Sbjct: 278 MTSH----PKDLSDELIEVMRDS-KKICRHLH 304


>gi|297619205|ref|YP_003707310.1| Radical SAM domain-containing protein [Methanococcus voltae A3]
 gi|297378182|gb|ADI36337.1| Radical SAM domain protein [Methanococcus voltae A3]
          Length = 327

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 7/79 (8%)

Query: 92  RYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +Y   ++LKL + C + C++C+     ++ G      +  +  + A+ Y+       ++ 
Sbjct: 2   KY---LILKLTNNCNLRCKYCYANLSSDLDGDISNRNMDFETAKKAIDYLLSIDNNLKIQ 58

Query: 149 FTGGDPLILSHKRLQKVLK 167
           FTGG+PL L+ + L+K+++
Sbjct: 59  FTGGEPL-LNFELLKKIVE 76


>gi|238019340|ref|ZP_04599766.1| hypothetical protein VEIDISOL_01204 [Veillonella dispar ATCC 17748]
 gi|237864039|gb|EEP65329.1| hypothetical protein VEIDISOL_01204 [Veillonella dispar ATCC 17748]
          Length = 431

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 29/163 (17%)

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ    ++ +N    E     G+ +             R  +K+   C  YC FC     
Sbjct: 117 RQINAVRDIMNESNFEEMPLYGNESDKA----------RAFMKIQEGCNNYCAFC----- 161

Query: 118 VGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFTG---GDPLILSHKR--LQKVLKTL 169
           +       L S+  +  +     + E     E++ TG   G+  +    R  L  V+K L
Sbjct: 162 IIPYTRGKLKSRKVDDIVQEAKRLVEH-GFHEIVLTGIHLGNYGVELPGRPTLADVVKAL 220

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
             I  +  +RF S    ++   ++ EL++ L    K V   +H
Sbjct: 221 LEIPDLYRIRFGS----IESVEVSDELVE-LMATNKRVCPHLH 258


>gi|229590703|ref|YP_002872822.1| putative radical SAM protein [Pseudomonas fluorescens SBW25]
 gi|229362569|emb|CAY49476.1| putative radical SAM protein [Pseudomonas fluorescens SBW25]
          Length = 500

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 12/97 (12%)

Query: 82  NHSPLKGIVHRYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
            H P   +  +Y  R           L  +   C   C++C             LS  D 
Sbjct: 80  RHDPFPEMAAQYRSRKDFLFQGPALHLFVVTLRCNHTCQYCQVSRAPLGGSNHDLSEADA 139

Query: 132 EAALAYI-QEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
           +AA+  + +  +    V F GG+PL L+ +R++++++
Sbjct: 140 QAAVDRLFESNAPALTVEFQGGEPL-LAFERVRQIVE 175


>gi|168187897|ref|ZP_02622532.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
 gi|169294251|gb|EDS76384.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
          Length = 444

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             +++   C   C +C   ++ G  +   L       A         + E+I  G D  I
Sbjct: 147 AYIRISEGCDNLCTYCIIPKIRGKYRSRSL-ESIINEAKE--LANMGVKELILVGQDTAI 203

Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                    +L  +LK L  I+ ++ +R    V    P+ I  ELI+ +K   K
Sbjct: 204 YGSDLYEENKLSTLLKELSNIEDIEWIR----VLYTYPEEITDELIEEIKNNDK 253


>gi|160903003|ref|YP_001568584.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95]
 gi|160360647|gb|ABX32261.1| Radical SAM domain protein [Petrotoga mobilis SJ95]
          Length = 455

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 13/123 (10%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKSQIWEVIFT 150
             +L L   C   C +CF+ E     +       D+E  + +I         +   +  T
Sbjct: 91  TFVLYLTLNCNFNCVYCFQGEE-NKNRNITFKKNDSELIVNFIKKKFDASDDEKLTLTLT 149

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+PL L    +Q+++  L     V   R  +R  I +   ++ E  +  ++     +++
Sbjct: 150 GGEPL-LKFPLIQEIVTKLES--QVGKNRLSTR-LISNGSLLDEEKCRFFEKHN---WVS 202

Query: 211 IHA 213
              
Sbjct: 203 TQI 205


>gi|124026938|ref|YP_001012258.1| Fe-S oxidoreductase - arylsulfatase regulator AslB [Hyperthermus
           butylicus DSM 5456]
 gi|123977632|gb|ABM79913.1| Fe-S oxidoreductase - arylsulfatase regulator AslB [Hyperthermus
           butylicus DSM 5456]
          Length = 415

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 38/224 (16%), Positives = 85/224 (37%), Gaps = 31/224 (13%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           + +  E    P+      P +    R P  +  +    C + C+ C R   +       L
Sbjct: 1   MKVGSEHSGYPLH--RTWPFE----RNPLLVFWETTKACMLACKHC-RASAILKSLPGEL 53

Query: 127 SSKDTEAALAYIQEKSQIWEVI-FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           ++++    +  +    Q + ++  TGGDPL+ S   +  ++   +     + LR     P
Sbjct: 54  TTEEAYKLIDDVAAFGQPYPILVLTGGDPLLRSD--IWDIIAYAKG----KGLRLAV-AP 106

Query: 186 IVDPQRINPELIQCLKEAGKP-VYIAIHANHPYEFSEEAIA----------AISRLANAG 234
            V P  +  + ++ L E G   V I++  + P E  +              AI      G
Sbjct: 107 AVSPN-LTEDKVKKLAELGVDGVSISLDGSRP-EIHDGIRGTSGVFEKTLWAIKTFQEYG 164

Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278
           + +   + +++   D+   LA++    ++L +K + + +     
Sbjct: 165 VRVQVNTAVMR---DNVHDLADIAALLLKLGVKVWEVFYLVPVG 205


>gi|120597074|ref|YP_961648.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. W3-18-1]
 gi|146291496|ref|YP_001181920.1| molybdenum cofactor biosynthesis protein A [Shewanella putrefaciens
           CN-32]
 gi|120557167|gb|ABM23094.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. W3-18-1]
 gi|145563186|gb|ABP74121.1| GTP cyclohydrolase subunit MoaA [Shewanella putrefaciens CN-32]
          Length = 337

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +  VC   C +C         K   LS  + E  ++   +     ++  TGG+P +  
Sbjct: 28  MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
                 +++ +         R H+     +  R+     +      + + +++ +  P  
Sbjct: 87  D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139

Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
             + +      E +  I    +AG   +   +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179


>gi|308172658|ref|YP_003919363.1| hypothetical protein BAMF_0767 [Bacillus amyloliquefaciens DSM 7]
 gi|307605522|emb|CBI41893.1| hypothetical protein yfkA1 [Bacillus amyloliquefaciens DSM 7]
          Length = 177

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L     +  L  ++E   +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNALP---IDLLLKRLEEIPLLRSISITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +++ +  L    H + +R           +IN  L   +    +  P    +H +
Sbjct: 90  LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIGRYERIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|256828649|ref|YP_003157377.1| nitrogenase cofactor biosynthesis protein NifB [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577825|gb|ACU88961.1| nitrogenase cofactor biosynthesis protein NifB [Desulfomicrobium
           baculatum DSM 4028]
          Length = 418

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 45/264 (17%), Positives = 87/264 (32%), Gaps = 80/264 (30%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAY----IQEKSQIWEVI 148
            R+ L +   C + C +C R+    ++    ++S     + A+ Y    ++++ +I  V 
Sbjct: 22  GRVHLPVAPGCNIQCNYCNRKYDCVNESRPGVTSAILPPDRAVEYLDEVLKKEPRITVVG 81

Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP----------IVDPQRINPELI 197
             G GDP+        +  +TL  I+     R +++ P          +  P+ ++    
Sbjct: 82  IAGPGDPM-------AEAKRTLETIE-----RINAKYPNMLYCLSSNGLALPEHVD---- 125

Query: 198 QCLKEAGKPVYIAIHAN-HPYEFSEEA----------------------------IAAIS 228
             L E G       H          E                             + +I 
Sbjct: 126 -RLAELG-----VTHVTVTMNAVDPEIGAKIYSWVRVGKVVYRGVEGAKILLERQLESIR 179

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI---KPYYLHHPDLAAGTSHFRL 285
            L   GI +   S+++ G+ND   I    +   +   I    P  LH             
Sbjct: 180 LLKAKGITVKVNSIIIPGVNDHHLIEVAKVAASLGADIQNLIP--LHPTADTPFAG---- 233

Query: 286 TIEE-GQKIVASLKEKISGLCQPF 308
            +EE  ++++  L+ K  G   P 
Sbjct: 234 -VEEPTKELIHELRAK-GGALVPQ 255


>gi|206559374|ref|YP_002230135.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           cenocepacia J2315]
 gi|206561224|ref|YP_002231989.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           cenocepacia J2315]
 gi|198035412|emb|CAR51288.1| molybdenum cofactor biosynthesis protein A 2 [Burkholderia
           cenocepacia J2315]
 gi|198037266|emb|CAR53188.1| molybdenum cofactor biosynthesis protein A 1 [Burkholderia
           cenocepacia J2315]
          Length = 370

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%)

Query: 77  PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
           P+ D +  P + G+ H  PD  L            + +   C   C +C     F ++  
Sbjct: 7   PLADVSGMPDVSGVAHA-PDGTLADTFARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYP 65

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
                 +L+ ++ E           + ++  TGG+PL+   K L+ +++ L  +
Sbjct: 66  FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116


>gi|218246611|ref|YP_002371982.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
           8801]
 gi|257059654|ref|YP_003137542.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
           8802]
 gi|218167089|gb|ACK65826.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
           8801]
 gi|256589820|gb|ACV00707.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
           8802]
          Length = 491

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 76/230 (33%), Gaps = 63/230 (27%)

Query: 59  QFI-PQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
           Q I P  +E +   P   ED              H Y  R+ + +   C + C +C R+ 
Sbjct: 41  QAIAPDIQERIAKHPCYSEDA------------HHHYA-RLHVAVAPACNIQCNYCNRKY 87

Query: 117 ------MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHK--------- 160
                   G     +   +    AL    +  Q+  +   G GDPL    +         
Sbjct: 88  DCANESRPGVVSEVLTPEEAAHKALVIAGKIPQMTVLGIAGPGDPLANPEQTFRTFELVA 147

Query: 161 ---------------RLQKVLKTL--RYIKHVQILRFHSRVPIVDP---QRINPELIQCL 200
                           L   +  +    I HV  L  +    ++DP   ++I P  ++  
Sbjct: 148 EKAPDIKLCLSSNGLMLPDYIDRIKELKIDHV-TLTIN----MIDPEIGEKIYP-WVRFN 201

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           ++  K +   +   H  +       ++  L  A I+    SV++ GIND 
Sbjct: 202 RKRYKGLE-GVKILHERQM-----ESLDALREANILCKVNSVMIPGINDH 245


>gi|2183203|gb|AAC33370.1| nitrogenase [Cyanothece sp. PCC 8801]
          Length = 558

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 43/230 (18%), Positives = 76/230 (33%), Gaps = 63/230 (27%)

Query: 59  QFI-PQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
           Q I P  +E +   P   ED              H Y  R+ + +   C + C +C R+ 
Sbjct: 41  QAIAPDIQERIAKHPCYSEDA------------HHHYA-RLHVAVAPACNIQCNYCNRKY 87

Query: 117 ------MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHK--------- 160
                   G     +   +    AL    +  Q+  +   G GDPL    +         
Sbjct: 88  DCANESRPGVVSEVLTPEEAAHKALVIAGKIPQMTVLGIAGPGDPLANPEQTFRTFELVA 147

Query: 161 ---------------RLQKVLKTL--RYIKHVQILRFHSRVPIVDP---QRINPELIQCL 200
                           L   +  +    I HV  L  +    ++DP   ++I P  ++  
Sbjct: 148 EKAPDIKLCLSSNGLMLPDYIDRIKELKIDHV-TLTIN----MIDPEIGEKIYP-WVRFN 201

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           ++  K +   +   H  +       ++  L  A I+    SV++ GIND 
Sbjct: 202 RKRYKGLE-GVKILHERQM-----ESLDALREANILCKVNSVMIPGINDH 245


>gi|317152988|ref|YP_004121036.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316943239|gb|ADU62290.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 315

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 30/173 (17%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
           +   C + CR+C+       ++   + ++     LA + E   ++ ++  GG+PL     
Sbjct: 18  ITTSCSLSCRYCYASHW---KEERHIDTERFLELLAEMDEM-GVFLLLLAGGEPLRHPD- 72

Query: 161 RLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPV---YIAIHANHP 216
              ++L+     +  V +L   +  P         EL   L E  K +    + +  +HP
Sbjct: 73  -FFRILEAAIQTRMSVSVLTNGTESP---------ELAVRLAECHKNIHPFVVQVSLDHP 122

Query: 217 YEF--------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
            E         +      I  LA  G+     +V+   +N D   L +L   F
Sbjct: 123 SEAVNDRTRGKTASVRQFIHTLAENGLTPQIATVIT-TVNKDR--LGDLFHAF 172


>gi|260587677|ref|ZP_05853590.1| tRNA-I(6)A37 modification enzyme MiaB [Blautia hansenii DSM 20583]
 gi|260541942|gb|EEX22511.1| tRNA-I(6)A37 modification enzyme MiaB [Blautia hansenii DSM 20583]
          Length = 312

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 65/149 (43%), Gaps = 19/149 (12%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
             + + I   +  D I +    P++    +YP +  + ++  C  +C +C    + G ++
Sbjct: 175 LSDRMIIDIWKDTDKIVE--DLPVE---RKYPFKSGVNIMFGCNNFCSYCIVPYVRGRER 229

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQ 176
               + KD    +  + +   + EV+  G + +    K L +      +L  +  I+ ++
Sbjct: 230 SR--NPKDIVREIERLVKD-GVVEVMLLGQN-VNSYGKNLDEPMTFAQLLTEIEKIEGLK 285

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            +RF +      P+ ++ ELI+ +K + K
Sbjct: 286 RIRFMTSH----PKDLSDELIEVMKNSKK 310


>gi|255321817|ref|ZP_05362967.1| molybdenum cofactor biosynthesis protein A [Campylobacter showae
           RM3277]
 gi|255300921|gb|EET80188.1| molybdenum cofactor biosynthesis protein A [Campylobacter showae
           RM3277]
          Length = 322

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 19/162 (11%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C   C++C  +       +  +LS ++       +     + ++  TGG+PL+ 
Sbjct: 15  ISVTQRCNFRCKYCMPKTPFSWEPRENLLSFEEL-FLFVKVCLDEGVKKIRITGGEPLLR 73

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA------ 210
               L K +  +        L   +         +     + LK AG K + ++      
Sbjct: 74  KD--LDKFIAMINEHSPDVDLAITTNGF------MLKHYAKALKNAGLKRINMSLDSLKT 125

Query: 211 --IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                        E +A +     AG+ +   +V L+G+NDD
Sbjct: 126 EKAKFLAQKSVLHEVLAGLDAALEAGLKVKLNTVALRGVNDD 167


>gi|226311189|ref|YP_002771083.1| menaquinone biosynthesis protein [Brevibacillus brevis NBRC 100599]
 gi|226094137|dbj|BAH42579.1| putative menaquinone biosynthesis protein [Brevibacillus brevis
           NBRC 100599]
          Length = 368

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 8/74 (10%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
            +VC  YCRFC      GS +G VL     E     IQE   +   E++  GG       
Sbjct: 60  TNVCDTYCRFCAFYRPPGSSEGYVLPR---ETIFEKIQETVDVGGTEILMQGG---TNPD 113

Query: 160 KRLQKVLKTLRYIK 173
            +L      LR IK
Sbjct: 114 LKLDYYTDLLRAIK 127


>gi|323463736|gb|ADX75889.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           pseudintermedius ED99]
          Length = 340

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G       K  +LS ++       +  +  + +V  TGG+
Sbjct: 18  ISVTDRCNFRCDYCMPKEIFGDNYVFLPKNQLLSFEEIVRITK-LYAQLGVKKVRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+     L +++  +  I+ ++ +
Sbjct: 77  PLLRRD--LHQLIAQITQIEGIEDI 99


>gi|253682144|ref|ZP_04862941.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
 gi|253561856|gb|EES91308.1| conserved hypothetical protein [Clostridium botulinum D str. 1873]
          Length = 433

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 23/129 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  LK+   C  +C +C             + SKD E  +  +++ S+    E+I +G
Sbjct: 141 KTRAFLKIQDGCNNFCSYCLI-----PFARGAVCSKDPEIIIDEVKKLSEHGFKEIILSG 195

Query: 152 GDPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--QCLKEAG 204
            D             L +VLK +  I+ +  +R  S         I PE      +KE G
Sbjct: 196 IDIASYGVDLEGDWNLLRVLKAIDEIEGINRVRIGS---------IGPEFFNEDIIKEIG 246

Query: 205 KPVYIAIHA 213
               +  H 
Sbjct: 247 SLKKLCPHF 255


>gi|291297322|ref|YP_003508720.1| radical SAM enzyme, Cfr family [Meiothermus ruber DSM 1279]
 gi|290472281|gb|ADD29700.1| radical SAM enzyme, Cfr family [Meiothermus ruber DSM 1279]
          Length = 342

 Score = 41.6 bits (97), Expect = 0.18,   Method: Composition-based stats.
 Identities = 48/209 (22%), Positives = 77/209 (36%), Gaps = 48/209 (22%)

Query: 93  YPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL--AYIQEK--SQIWE 146
           Y +R  + +  +  CP  C FC    M       + +++  +  L  AY Q+    +I  
Sbjct: 95  YLNRKTICISSMVGCPAGCTFCATGRM--GFGRNLTAAEMLDQVLFAAYHQQHAPREIRN 152

Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC------ 199
           V+  G G+PL+     L+ V K L  +        H     + P+RI    +        
Sbjct: 153 VVLMGMGEPLL----NLENVFKALERM-------LHPEGLAMSPRRITLSTVGIPRGIYK 201

Query: 200 LKEAGK--PVYIAIHA------------NHPYEFSE--EAIAAISRLANAGIILLSQSVL 243
           + E G    + +++HA             H Y  +E  EA+          I L     L
Sbjct: 202 MAEWGLEVRLALSLHAPDDETRQRIIPTAHRYSIAEIMEAVRHYYAKTKRRITLE--YTL 259

Query: 244 LKGINDD---PEILANLMRTF-VELRIKP 268
           LKG+ND       LA   R   V + + P
Sbjct: 260 LKGVNDHDWQARALAQHFRGLSVHMNLIP 288


>gi|171317149|ref|ZP_02906351.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           MEX-5]
 gi|171097716|gb|EDT42546.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           MEX-5]
          Length = 370

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 22/114 (19%)

Query: 77  PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
           P+ D +  P + G+ H  PD  L            + +   C   C +C     F +   
Sbjct: 7   PLADVSGMPDISGVAHT-PDGALADRFARPLHDLRISVTDRCNFRCVYCMPRDVFDKNYP 65

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
                 +L+ ++ E           + ++  TGG+PL+   K L+ +++ L  +
Sbjct: 66  FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116


>gi|146337422|ref|YP_001202470.1| putative Fe-S oxidoreductases [Bradyrhizobium sp. ORS278]
 gi|146190228|emb|CAL74220.1| conserved hypothetical protein; putative predicted Fe-S
           oxidoreductases [Bradyrhizobium sp. ORS278]
          Length = 470

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 31/171 (18%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155
            L+++   C + C  CF       Q+         E  L  + Q + +   V  +GG+P 
Sbjct: 103 ALIEITDHCNLTCPVCF--AESSPQRAHFSPLATVERMLDALVQSEGEPDLVQISGGEP- 159

Query: 156 ILSHKRLQKVLKTLRY--IKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
            L  +    +L  +R   I+HV I    LR   R P         + +  L E  + + +
Sbjct: 160 TLHPEFFD-ILAAVRARPIRHVMINTNGLRIA-REP---------DFVSRLAETKRGLEV 208

Query: 210 AIHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
            +  +                     A+  L  AGI     + + +G+NDD
Sbjct: 209 YLQFDSLSRAGLTNIRGADLRRIRQQALENLERAGISTTLVATIKRGVNDD 259


>gi|170732420|ref|YP_001764367.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           cenocepacia MC0-3]
 gi|254245935|ref|ZP_04939256.1| Radical SAM:Molybdenum cofactor synthesis C [Burkholderia
           cenocepacia PC184]
 gi|124870711|gb|EAY62427.1| Radical SAM:Molybdenum cofactor synthesis C [Burkholderia
           cenocepacia PC184]
 gi|169815662|gb|ACA90245.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           cenocepacia MC0-3]
          Length = 370

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F ++        +L+ ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTHEEIERVARLFVAH-GVEKIRITGGE 99

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K L+ +++ L  +
Sbjct: 100 PLL--RKNLEFLIERLARL 116


>gi|107022186|ref|YP_620513.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           cenocepacia AU 1054]
 gi|116689132|ref|YP_834755.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           cenocepacia HI2424]
 gi|105892375|gb|ABF75540.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia AU 1054]
 gi|116647221|gb|ABK07862.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia HI2424]
          Length = 370

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%)

Query: 77  PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
           P+ D +  P + G+ H  PD  L            + +   C   C +C     F ++  
Sbjct: 7   PLADVSGMPDVSGVAHA-PDGTLADTFARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYP 65

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
                 +L+ ++ E           + ++  TGG+PL+   K L+ +++ L  +
Sbjct: 66  FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116


>gi|312898876|ref|ZP_07758264.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
 gi|310620038|gb|EFQ03610.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
          Length = 481

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 63/179 (35%), Gaps = 42/179 (23%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS------KDTEAALAYIQEK 141
           + H   D  L   +  C  +C +C F   +VG++K   L        +D +       + 
Sbjct: 150 VQHETRDAALYVGIPYCASHCLYCSFPSRLVGNEKAERLLDFTNKLIEDIQDVQRLCSDT 209

Query: 142 S-QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK------HVQILRFHSRVPIVDPQRINP 194
             +I  +   GG P  LS + +++++  L+ +        V+  R         P  +  
Sbjct: 210 GIRIDSIYVGGGTPTSLSVEAVERIMSALQPLAGACREWTVEAGR---------PDTMTE 260

Query: 195 ELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR-------------LANAGIILLS 239
           E  + L+  G   + I      P    +  + A+ R               +AG  +++
Sbjct: 261 EKARILRAYGVDRISIN-----PQTMQQHLLDALGRRHTVRDIYRMFDYCRDAGFSVIN 314


>gi|289548187|ref|YP_003473175.1| nitrogenase cofactor biosynthesis protein NifB [Thermocrinis albus
           DSM 14484]
 gi|289181804|gb|ADC89048.1| nitrogenase cofactor biosynthesis protein NifB [Thermocrinis albus
           DSM 14484]
          Length = 472

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 38/211 (18%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           H Y  R+ + +   C + C +C R+         G     +   +  +  LA   E  Q+
Sbjct: 39  HFYA-RMHVAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPEEAAKKVLAVAMEIPQL 97

Query: 145 WEVIFTG-GDPLILSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQ----------R 191
             V   G GDPL    +  +  +++K       +++    +   ++D             
Sbjct: 98  TVVGIAGPGDPLANPERTFRTFELIKE--KAPDIKLC-LSTNGLVLDKYINKIKDLEIDH 154

Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAI--------AAISRLANAGIILLSQSVL 243
           +   +     +    +Y  I  NH     +EA           +      GI++   +V 
Sbjct: 155 VTITINAVSVDTASKIYPWIFYNHRRYRDKEAAKILLEKQYEGLQACVENGILVKVNTVF 214

Query: 244 LKGINDDPEILANLMRTFVELR-----IKPY 269
           +  IN   E +  L +    +      I PY
Sbjct: 215 VPEIN--GEEIPELSKKVRSMGAFLHNIMPY 243


>gi|237745122|ref|ZP_04575603.1| predicted protein [Fusobacterium sp. 7_1]
 gi|229432351|gb|EEO42563.1| predicted protein [Fusobacterium sp. 7_1]
          Length = 367

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 36/185 (19%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
             + + C   C  C+ +   +  +  T       E  L Y Q+ ++I  +   GGDP + 
Sbjct: 31  FYITNKCTESCEHCYLKNTKIQKELTTKEVISKIEEFLEYCQKTNKIPIIDLIGGDPFLR 90

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
               ++ +L+ L+    ++ + F  +  P + PQ I       L E G   Y  +  +  
Sbjct: 91  LD--IKNILRYLK----LKKINFGIKGNPNLLPQNI-----NLLVEYGARRY-QLSLDGT 138

Query: 217 YEFSE---------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
            E  +         + I +I  L +  I +  +  L        E    L +        
Sbjct: 139 EEIHDRIRSKGSFKKTIESIKLLNDVNIPVNIKFTL------SSENETELWKLL------ 186

Query: 268 PYYLH 272
            YYL+
Sbjct: 187 -YYLY 190


>gi|170700217|ref|ZP_02891233.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           IOP40-10]
 gi|170134850|gb|EDT03162.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria
           IOP40-10]
          Length = 370

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 22/114 (19%)

Query: 77  PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
           P+ D +  P + G+ H  PD  L            + +   C   C +C     F +   
Sbjct: 7   PLADVSGMPDISGVAHT-PDGALADRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKNYP 65

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
                 +L+ ++ E           + ++  TGG+PL+   K L+ +++ L  +
Sbjct: 66  FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116


>gi|158320587|ref|YP_001513094.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus oremlandii
           OhILAs]
 gi|229890436|sp|A8MFD5|MIAB_ALKOO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|158140786|gb|ABW19098.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus oremlandii
           OhILAs]
          Length = 471

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 51/130 (39%), Gaps = 12/130 (9%)

Query: 78  IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           + D     ++G+    +Y  +  + +++ C  +C +C      G ++   ++      A 
Sbjct: 159 VWDEETGIVEGLPANRKYDLKGFINIMYGCNNFCTYCIVPYTRGRERSREVA-DIIREAT 217

Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDP 189
                 +   E+   G + +    K L+       +L+ L  I  ++ +RF +  P    
Sbjct: 218 D--LANNGTKEITLLGQN-VNSYGKTLEHPIDFADLLRALNKIDGIERIRFMTSHPKDLS 274

Query: 190 QRINPELIQC 199
           +R+   + +C
Sbjct: 275 ERLIDAIAEC 284


>gi|327398946|ref|YP_004339815.1| Radical SAM domain-containing protein [Hippea maritima DSM 10411]
 gi|327181575|gb|AEA33756.1| Radical SAM domain protein [Hippea maritima DSM 10411]
          Length = 356

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDP 154
           R+ ++L   C   C+ CF+      +K   +  +        +    ++ EV+  G G+P
Sbjct: 22  RVYIELTSACNFNCKMCFKNAFT--EKDGFMDKRTLSNLKKSLTSLPKLKEVVLGGIGEP 79

Query: 155 LILSHKRLQKVLKTLRY 171
           LI +   L+ ++  L+ 
Sbjct: 80  LIHND--LKDIVTFLKE 94


>gi|154496671|ref|ZP_02035367.1| hypothetical protein BACCAP_00963 [Bacteroides capillosus ATCC
           29799]
 gi|150273923|gb|EDN01023.1| hypothetical protein BACCAP_00963 [Bacteroides capillosus ATCC
           29799]
          Length = 386

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 24/170 (14%), Positives = 57/170 (33%), Gaps = 39/170 (22%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-------------AALAYIQEKSQI 144
           ++     C + C++CF  E   S      +  + +               + Y +++   
Sbjct: 21  IIACTKECNMRCKYCFEEENFKSDYSVPSAKINADFQLGIPYFERFGRELIEYNRKRGFR 80

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            E  F GG+P+++  + + ++ +    +    +    +   I        E++  L++  
Sbjct: 81  TEFTFHGGEPMLIKPELIAQLCEYYISLDPAVLFNVQTNGTIC-----TEEMLGLLRKYR 135

Query: 205 KPVYIAI----------------HANHPYEFSEEAIAAISRLANAGIILL 238
             V ++I                H  H        +  I ++  AGI L 
Sbjct: 136 FRVGVSIDGTEALHDENRVFPNGHGTH-----SVVMQNIRKMQKAGIQLG 180


>gi|78065694|ref|YP_368463.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. 383]
 gi|77966439|gb|ABB07819.1| GTP cyclohydrolase subunit MoaA [Burkholderia sp. 383]
          Length = 370

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%)

Query: 77  PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118
           P+ D +  P + G+ H  PD  L            + +   C   C +C     F ++  
Sbjct: 7   PLADVSGMPDVSGVAHA-PDGTLADTFARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYP 65

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
                 +L+ ++ E           + ++  TGG+PL+   K L+ +++ L  +
Sbjct: 66  FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116


>gi|118579699|ref|YP_900949.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118502409|gb|ABK98891.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
          Length = 344

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 65/156 (41%), Gaps = 17/156 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           RY   ++L L   C + C +C+     G ++G  +S +    AL  +        V  +G
Sbjct: 5   RY---LVLGLTTRCNLSCAYCY---HAGLERGMDMSPEVARTALDLVALGEGPLHVQLSG 58

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+P  L+ + ++ V+  +R +K    +   +   +     ++ +L++ L E G  V +++
Sbjct: 59  GEP-TLAREMVRYVVAEIRRLKRPCTVGIQTNATL-----LDEDLVRFLGEHGVQVGVSL 112

Query: 212 HANHP--YEFSEEAIAA---ISRLANAGIILLSQSV 242
                       EA  A   ++ L   G+     +V
Sbjct: 113 DGPPAIQQRLRGEADKALLGLTLLEKMGVPFRVTTV 148


>gi|296446358|ref|ZP_06888303.1| Radical SAM domain protein [Methylosinus trichosporium OB3b]
 gi|296256131|gb|EFH03213.1| Radical SAM domain protein [Methylosinus trichosporium OB3b]
          Length = 298

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 11/91 (12%)

Query: 95  DRILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-----SQIWEVI 148
           D ++L +   C    C FC   EM  + +       + E  L  ++         +  V 
Sbjct: 20  DSLILPVTDGCSWNRCAFC---EMYTAPQKRFRPRDEAE-VLESLRRCGAELGDSVKRVF 75

Query: 149 FTGGDPLILSHKRLQKVLKTLRY-IKHVQIL 178
              GD + LS +RL  +L  +R  +  V+ +
Sbjct: 76  LADGDAMTLSTRRLATILAAIRRELPGVRRV 106


>gi|295115178|emb|CBL36025.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [butyrate-producing
           bacterium SM4/1]
          Length = 457

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 66/152 (43%), Gaps = 20/152 (13%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           + I   +  D I ++  S       +YP +  + ++  C  +C +C    + G ++    
Sbjct: 141 MVIDIWKDTDKIVEDLPS-----ERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSRRP 195

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL------QKVLKTLRYIKHVQILRF 180
             +D    +  +     + EV+  G + +    K L       ++L+ +  I+ ++ +RF
Sbjct: 196 --EDIIKEIEGLVAD-GVVEVMLLGQN-VNSYGKNLPEPITFAELLRRVEQIEGLERIRF 251

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            +      P+ ++ ELI+ ++++ K +   +H
Sbjct: 252 MTSH----PKDLSDELIEVMRDS-KKICRHLH 278


>gi|116748310|ref|YP_844997.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697374|gb|ABK16562.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 331

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 66/188 (35%), Gaps = 29/188 (15%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           V ++P  ++L+  H C + C  C R         T+      +  L  + E      V  
Sbjct: 23  VEKFPLVLMLEPTHRCNLTCSGCGRIR---EYHDTLHQEMTLDECLRSVDESPSP-VVTI 78

Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           TGG+PL+ S  R+Q ++ + L   KH+    F +         +  E +   +      +
Sbjct: 79  TGGEPLLYS--RIQALVDSVLARKKHIY---FCTNAL------LLEESLPMFQPHSHFTW 127

Query: 209 IAIHANHPYEFSEE-------AIAAISRLANA---GIILLSQSVLLKGINDDPEILANLM 258
             +H +      +           A++ +  A   G  + + + + +    D + L  L 
Sbjct: 128 -NVHFDGTETVHDAIIGRPGGFQKALAGVRAAKARGFRVSTNTTVYR--ETDVDDLERLF 184

Query: 259 RTFVELRI 266
                  +
Sbjct: 185 EQLAAAGV 192


>gi|304411770|ref|ZP_07393382.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
           OS183]
 gi|307306178|ref|ZP_07585923.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
           BA175]
 gi|304349958|gb|EFM14364.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
           OS183]
 gi|306911051|gb|EFN41478.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
           BA175]
          Length = 337

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +  VC   C +C         K   LS  + E  ++   +     ++  TGG+P +  
Sbjct: 28  MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
                 +++ +         R H+     +  R+     +      + + +++ +  P  
Sbjct: 87  D--FTDIIRVVADNP-----RIHTIATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139

Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
             + +      E +  I    +AG   +   +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179


>gi|149183016|ref|ZP_01861471.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1]
 gi|148849300|gb|EDL63495.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1]
          Length = 450

 Score = 41.6 bits (97), Expect = 0.19,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 82/205 (40%), Gaps = 22/205 (10%)

Query: 37  IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG---DNNHSPLKGIVHRY 93
           I  T +    +    P + I R    + +E  ++ +E+ D +    D   S +  +    
Sbjct: 68  IRPTKLYHKSVREGTPREEIRR----KLKEDYLITDEKIDLMERIVDRQLSVVPDLYSLQ 123

Query: 94  PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDTEAALAYIQEKS-QIWE 146
            +  +   +  CP  C +C F    +  ++G V S       + +    +++E   +I  
Sbjct: 124 KEISIYIGIPFCPTKCAYCTFPAYAILGKQGRVDSFLTGLHYEIQETGRWLKENGVKITT 183

Query: 147 VIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
           + + GG P  ++ +++  + + + R    V  +R  + V    P  I P+ ++ L +   
Sbjct: 184 IYYGGGTPTSITAEQMDLLYEEMYRSFPDVDQVREVT-VEAGRPDTITPDKLEVLNKWNI 242

Query: 205 KPVYIAIHANHPYEFSEEAIAAISR 229
             + I      P  ++ E + AI R
Sbjct: 243 DRISIN-----PQSYTNETLKAIGR 262


>gi|298373586|ref|ZP_06983575.1| Fe-S oxidoreductase [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274638|gb|EFI16190.1| Fe-S oxidoreductase [Bacteroidetes oral taxon 274 str. F0058]
          Length = 417

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  YC +C      G  +   ++        A+A         E+I TG
Sbjct: 141 RTRYFLKVQDGCNYYCTYCTIPFARGKSRSASVAVTMDTIRRAIA-----EGAREIILTG 195

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
              GD    S +R   +++ +  +      R  S    V+P  +  ++I+ +  + +   
Sbjct: 196 VNIGDFGNGSSERFIDLVRNIDDMTDEVRFRISS----VEPNLLEDDIIRLIAHSRR--- 248

Query: 209 IAIHA 213
           IA H 
Sbjct: 249 IAPHF 253


>gi|284047499|ref|YP_003397838.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
 gi|283951720|gb|ADB46523.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
          Length = 302

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 13/116 (11%)

Query: 98  LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQIWEVIFTGGDP 154
           +L++   C    C FC    M    + +V   ++   + ALA    ++Q+  +    GD 
Sbjct: 24  ILRVTRGCAHNTCTFC---AMYKDVRFSVCPDEEISRQIALAARYARNQVKRIFLADGDA 80

Query: 155 LILSHKRLQKVLKTLRY-IKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPV 207
           L+L  ++L K+L  L     ++Q +      R  +    R + E +  L+EAG  +
Sbjct: 81  LVLPTEKLLKILAVLYRTFPNLQRVTSYAGPRDIL----RKSDEDMVRLREAGLKM 132


>gi|219667417|ref|YP_002457852.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
 gi|219537677|gb|ACL19416.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
          Length = 318

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 7/108 (6%)

Query: 55  PIARQFIPQKEELNILP-EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
           P+ RQ I Q E+L     E +      ++H    G VH    R+ L +   C + CRFC 
Sbjct: 12  PLRRQIINQIEQLIETQMEHQLRTPNISDHPCFNGAVHGKKGRLHLPISPACNIQCRFCR 71

Query: 114 R-----REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPL 155
           R         G  KG +   +  +     ++   +I  V   G GD L
Sbjct: 72  RACNSKELRPGVAKGILPIEEAVDIVGKALELCPEITVVGIAGPGDAL 119


>gi|148263090|ref|YP_001229796.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146396590|gb|ABQ25223.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 332

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 29/186 (15%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           +YP  ++L+  H+C + C  C R         T+      E  LA + E      V  TG
Sbjct: 25  KYPLVLMLEPTHLCNLACSGCGRIR---EYADTIQDMMSLEECLASVDECPAP-VVTITG 80

Query: 152 GDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G+P +     + ++++  L   KH+      +   +++        +  ++       + 
Sbjct: 81  GEPFLYP--HIFELIEAVLERGKHIY---LCTNALLLEKA------LDNMRPHP-NFTLN 128

Query: 211 IHA-----NHPY--EFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEILANLMRT 260
           IH       H    E       AI  +  A   G  + + + + K    D   +  L   
Sbjct: 129 IHMDGMEETHDRILERKGTFKTAIEAIKKAKKLGFRVCTNTTIFK--ETDLVEIEMLFSR 186

Query: 261 FVELRI 266
             E+ +
Sbjct: 187 LQEIGV 192


>gi|310643295|ref|YP_003948053.1| radical sam domain protein [Paenibacillus polymyxa SC2]
 gi|309248245|gb|ADO57812.1| Radical SAM domain protein [Paenibacillus polymyxa SC2]
          Length = 368

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 6/68 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
           P  ++ ++   C + C  C R E         L+ ++ +  L  I E        V+FTG
Sbjct: 14  PFIVIWEVTRACALKCLHC-RAEAQYKPDPRQLTFEEGKKLLDQIAEMNHP---LVVFTG 69

Query: 152 GDPLILSH 159
           GDPL    
Sbjct: 70  GDPLSRPD 77


>gi|322434214|ref|YP_004216426.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321161941|gb|ADW67646.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 469

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 34/181 (18%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDP----IGDNNHSPLKGI----VHRYPDR------ 96
           + +DP  +  I     L+      ++     I D +  P        +HRY +       
Sbjct: 138 DADDPNWKSKIAGAAYLDEAGGFHQNAARAQIADLDAQPWPARHAIDLHRYVETWRTHHQ 197

Query: 97  ---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
              +       CP  CR+C     V  Q             + ++  K    ++ +   D
Sbjct: 198 QGSVNFITARGCPYRCRWC--SHQVYGQTHRRRDPIKVVDEVEWL-MKEYTPDIAWVSDD 254

Query: 154 PLILSHKRLQKVLKTLRY----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
              ++H  ++K    +R     I    I    SR       R+N E++  L E G   ++
Sbjct: 255 VFTINHDWIRKYSAEMRRRGLHIPFECI----SRA-----DRLNEEMLDLLAELGCFRIW 305

Query: 209 I 209
           I
Sbjct: 306 I 306


>gi|222056186|ref|YP_002538548.1| protein of unknown function DUF512 [Geobacter sp. FRC-32]
 gi|221565475|gb|ACM21447.1| protein of unknown function DUF512 [Geobacter sp. FRC-32]
          Length = 433

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 42/213 (19%), Positives = 67/213 (31%), Gaps = 64/213 (30%)

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKG 123
            E+ +  +E E P+G    +P+                  C   C FCF  ++  G +K 
Sbjct: 61  WEMEVERDESE-PLGLIFQAPVP---------------AECGNKCIFCFVHQLPKGLRKP 104

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
             +  +D   +  Y         V     D               L  IK  ++      
Sbjct: 105 LYVKDEDYRLSFLY------GNYVTLANIDA------------SDLERIKSQRL------ 140

Query: 184 VPIVDPQRINPELI--QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
            P+         L+  + L + G P  +        E        I  LA AGI + +Q 
Sbjct: 141 SPLYISVHATDPLVRERMLGKTGIPPIL--------EI-------IKELAGAGITMHTQV 185

Query: 242 VLLKGIND------DPEILANLMRTFVELRIKP 268
           VL  G+ND          L++L      L + P
Sbjct: 186 VLCPGVNDGKVLAQTVADLSSLFPAVASLAVVP 218


>gi|89894712|ref|YP_518199.1| hypothetical protein DSY1966 [Desulfitobacterium hafniense Y51]
 gi|123279971|sp|Q24W37|RIMO_DESHY RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|89334160|dbj|BAE83755.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 445

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 20/118 (16%)

Query: 97  ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
             +K+   C  YC +C     R       + ++L  ++ EA          + EV+    
Sbjct: 151 AYVKVAEGCDNYCTYCIIPHVRGHFRSRTQESIL--REVEAM-----ASEGVKEVLLIAQ 203

Query: 153 DPL-ILSHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           D       +    RL  ++K +  I+ ++ +R         P+    ELI  +KE  K
Sbjct: 204 DTTRYGKDRYGEYRLPSLIKEIARIEGIEWIRL----MYCYPELFTDELITVMKETPK 257


>gi|293416947|ref|ZP_06659584.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
 gi|291431523|gb|EFF04508.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           B185]
          Length = 445

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|262384855|ref|ZP_06077987.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 2_1_33B]
 gi|262293571|gb|EEY81507.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 2_1_33B]
          Length = 444

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 11/123 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  YC +C      G  +   ++S   E A           E++ TG  
Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQARE--VASKGGKEIVLTGVN 205

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    +++ L  ++ +   R  S    ++P  I  E I       K     
Sbjct: 206 IGDFGKSTDETFIDLIRALDEVEGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260

Query: 211 IHA 213
            H 
Sbjct: 261 FHI 263


>gi|229584084|ref|YP_002842585.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27]
 gi|228019133|gb|ACP54540.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27]
          Length = 394

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 8/120 (6%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           + +  +P+   L  + EE      ++    +   + +      L L + C   C +CF++
Sbjct: 33  LRKGIVPEH--LKDIIEEGFSATDEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
              G +K   +S K     + YI++  +  +V  T  GG+PL L  ++++++ + L  +K
Sbjct: 91  ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146


>gi|46578994|ref|YP_009802.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|120603415|ref|YP_967815.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
           DP4]
 gi|46448407|gb|AAS95061.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|120563644|gb|ABM29388.1| GTP cyclohydrolase subunit MoaA [Desulfovibrio vulgaris DP4]
 gi|311232845|gb|ADP85699.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris
           RCH1]
          Length = 341

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 71/187 (37%), Gaps = 26/187 (13%)

Query: 78  IGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDT 131
           +   +  P   +V  +  R+    L +   C + C +C+       +      +L  ++ 
Sbjct: 1   MNHYDDRPASSLVDLHGRRVRYLRLSVTDRCNLRCLYCWGGGGMRFI--PHDDILRYEEM 58

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
              +  +  +S + +V  TGG+PL+   K +  +++ +R       LR  +         
Sbjct: 59  ARLVD-VAVESGVEKVRLTGGEPLV--RKNVLHLVELVRKKHPAIDLRITTNG------T 109

Query: 192 INPELIQCLKEAGKPVYIAI---------HANHPYEFSEEAIAAISRLANAGIILLSQSV 242
           +    +  L++ G                H     +F  + +A +  +  AG+ L   +V
Sbjct: 110 LLESHVAGLRDLGVSTVNVSLDTFRREVFHEVTGRDFLPQVMAGMEAVLAAGLSLKVNAV 169

Query: 243 LLKGIND 249
            L+G+ND
Sbjct: 170 ALRGVND 176


>gi|317501694|ref|ZP_07959885.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331088421|ref|ZP_08337336.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|316896945|gb|EFV19025.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330408188|gb|EGG87676.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 431

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 25/130 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  +C +C     +       + S+ T+  L  ++    +   EV+ TG
Sbjct: 143 HTRAYIKVQDGCNQFCTYC-----IIPYARGRVRSRQTKDVLEEVRDLAGNGYKEVVLTG 197

Query: 152 GDPLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                LS         + L  ++K +  ++ ++ +R  S    ++P  I  E  + L E 
Sbjct: 198 I---HLSSYGIDFDGQRHLLDLIKEVHKVEGIERIRLGS----LEPGIITEEFAKELSEM 250

Query: 204 GKPVYIAIHA 213
            K   +  H 
Sbjct: 251 PK---VCPHF 257


>gi|307596561|ref|YP_003902878.1| Radical SAM domain-containing protein [Vulcanisaeta distributa DSM
           14429]
 gi|307551762|gb|ADN51827.1| Radical SAM domain protein [Vulcanisaeta distributa DSM 14429]
          Length = 354

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 38/190 (20%), Positives = 67/190 (35%), Gaps = 44/190 (23%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCF---------RREMVGSQKGTVLSSKDTEAALAYI 138
           GIV R  + I ++   +CP+ C +C          R         T+L     E  +   
Sbjct: 31  GIVDRGTNIIEVRPTTLCPLSCIYCSVNAGPRSTNRWAEFVDDPETLL--MALEEVVR-F 87

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           +    I   I   G+P +     L  +++ ++ I  V I+   +R+          E ++
Sbjct: 88  KGTKDIEVHIDGMGEPGVYP--YLTYLIRGIKEIDGVSIVSMQTRL-----YMFTEEELR 140

Query: 199 CLKEAGK---PVYIAI---------------HANHPYEFSEEAIAAISRLANAGIILLSQ 240
            L +AG     + I                   NH  E     + A+      GI +++ 
Sbjct: 141 ELAQAGLDRINLSIDTLNPELAKKISGVPWYDVNHVMEL---VVQALEL----GINVIAS 193

Query: 241 SVLLKGINDD 250
            V L  IND+
Sbjct: 194 PVWLPSINDN 203


>gi|256811190|ref|YP_003128559.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
 gi|256794390|gb|ACV25059.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
          Length = 377

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 14/143 (9%)

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           EE+    EE  D + +     ++G      ++++L +  +C   C +C   E   ++   
Sbjct: 4   EEIEKYLEENFDKLPEGCKQCVRG------EKLVLFITGICNNNCYYCPLSEKRKNKDVI 57

Query: 125 VLSSKDTEAALAYIQEKS--QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
             + +        I+E        V  TGG+PL L   R  K L  L+     +   FHS
Sbjct: 58  YANERLLTTVGEAIEEAKLCSSKGVGITGGNPL-LKINRTVKFLNALKN----EFDEFHS 112

Query: 183 RVPIVDPQRINPELIQCLKEAGK 205
            +    P+ ++ E ++ LKEAG 
Sbjct: 113 HLYAT-PETVDEEKLKLLKEAGL 134


>gi|226311193|ref|YP_002771087.1| molybdenum cofactor biosynthesis protein A [Brevibacillus brevis
           NBRC 100599]
 gi|254811536|sp|C0Z9B3|MOAA_BREBN RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|226094141|dbj|BAH42583.1| molybdenum cofactor biosynthesis protein A [Brevibacillus brevis
           NBRC 100599]
          Length = 339

 Score = 41.6 bits (97), Expect = 0.20,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 66/174 (37%), Gaps = 40/174 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   CR+C   ++ G       +  +L+ ++       I     + ++  TGG+
Sbjct: 18  ISVTDKCNFRCRYCMPADIFGPDFEFLPQSKLLTFEEITRLTQ-IFTSLGVGKIRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS------------------RVPIVDPQRINPE 195
           PL+   + L ++++ +R ++ VQ +   +                  RV +     ++ E
Sbjct: 77  PLM--RRNLPELIRMIREVEGVQDIAMTTNGSLLSRHAQALKEAGLDRVTVSL-DSLDNE 133

Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
               L   G  V             +  +  I   A+AG+ +    V+ +G+ND
Sbjct: 134 RFGMLNGRGYQV-------------DSVLDGIRVAADAGLSIKINMVVQRGVND 174


>gi|328554278|gb|AEB24770.1| ribosomal protein S12 methylthiotransferase [Bacillus
           amyloliquefaciens TA208]
 gi|328912675|gb|AEB64271.1| ribosomal protein S12 methylthiotransferase [Bacillus
           amyloliquefaciens LL3]
          Length = 451

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     +L S+D E  +   Q+   +   E++ T 
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196

Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   +      K+L+ L   ++ ++ +R  S    ++  +I  E+I+ L  +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLRELDTRVEGLKRIRISS----IEASQITDEVIEVLDAS 249

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 250 DK-IVRHLHI 258


>gi|325981206|ref|YP_004293608.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Nitrosomonas sp. AL212]
 gi|325530725|gb|ADZ25446.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Nitrosomonas sp. AL212]
          Length = 442

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 45/144 (31%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153
              + ++  C  YC FC     V         S+  +  L  I       I E+   G +
Sbjct: 148 TAFVSIMEGCSKYCSFC-----VVPYTRGEEVSRPLDDVLTEIAVLAAQGIKEITLLGQN 202

Query: 154 P----LILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 +++   +     +L+ L  I  ++ +R+ +                        
Sbjct: 203 VNAYLGMMNDGEIADFALLLEYLHDIPGIERIRYTT------------------------ 238

Query: 207 VYIAIHANHPYEFSEEAIAAISRL 230
                  +HP EF+   I A ++L
Sbjct: 239 -------SHPKEFTTRLIQAYNQL 255


>gi|308174331|ref|YP_003921036.1| 30S ribosomal protein S12 methylthiotransferase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307607195|emb|CBI43566.1| ribosomal protein S12 methylthiotransferase [Bacillus
           amyloliquefaciens DSM 7]
          Length = 451

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     +L S+D E  +   Q+   +   E++ T 
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196

Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   +      K+L+ L   ++ ++ +R  S    ++  +I  E+I+ L  +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLRELDTRVEGLKRIRISS----IEASQITDEVIEVLDAS 249

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 250 DK-IVRHLHI 258


>gi|154686803|ref|YP_001421964.1| YqeV [Bacillus amyloliquefaciens FZB42]
 gi|154352654|gb|ABS74733.1| YqeV [Bacillus amyloliquefaciens FZB42]
          Length = 451

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     +L S+D E  +   Q+   +   E++ T 
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196

Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   +      K+L+ L   ++ ++ +R  S    ++  +I  E+I+ L  +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLRELDTRVEGLKRIRISS----IEASQITDEVIEVLDAS 249

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 250 DK-IVRHLHI 258


>gi|302865999|ref|YP_003834636.1| MiaB-like tRNA modifying enzyme YliG [Micromonospora aurantiaca
           ATCC 27029]
 gi|302568858|gb|ADL45060.1| MiaB-like tRNA modifying enzyme YliG [Micromonospora aurantiaca
           ATCC 27029]
          Length = 500

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 33/166 (19%)

Query: 81  NNHSPLKG---IVHRYPD--RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDT 131
           + H+P      + HR        LKL   C   C FC    FR   V      +L+  + 
Sbjct: 169 DAHTPAHLRQVLRHRLDTGPVASLKLASGCDRRCAFCAIPAFRGAFVSRTPDELLAEAEW 228

Query: 132 EAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            A       K+ + E++         G D  +   + L+K+L  L  I  +  +R     
Sbjct: 229 LA-------KTGVRELVLVSENSTSYGKD--LGDPRALEKLLPQLAAIDGIVRVR----A 275

Query: 185 PIVDPQRINPELIQCLKEA-GKPVYIAIHANHPYEFSEEAIAAISR 229
             + P    P L++ +    G   Y  +   H  E     +  + R
Sbjct: 276 SYLQPAETRPGLVEVIATTPGVAAYFDLSFQHSSE---PVLRRMRR 318


>gi|268608005|ref|ZP_06141736.1| hypothetical protein RflaF_00715 [Ruminococcus flavefaciens FD-1]
          Length = 224

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 41/171 (23%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +  L+     C   C FCF  +M    + T+    D +A L+++Q       V  T    
Sbjct: 75  ETFLMDNKQSCSNKCVFCFIDQMPKGMRETLYFKDD-DARLSFLQGN----YVTLT---- 125

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
             L    + ++++    I     +  H+     +P+                V +  H  
Sbjct: 126 -NLKQSDIDRIIEMKLNI----NVSVHT----TNPE--------------LRVKMM-H-- 159

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
               F+ E +  I +LA  GI L  Q V   G+ND       L R+  +L 
Sbjct: 160 --NRFAGEKLKFIWQLAENGIKLNCQIVCCPGLNDG----DELRRSLTDLG 204


>gi|187934049|ref|YP_001885400.1| Fe-S oxidoreductase [Clostridium botulinum B str. Eklund 17B]
 gi|187722202|gb|ACD23423.1| Fe-S oxidoreductase [Clostridium botulinum B str. Eklund 17B]
          Length = 444

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 52/160 (32%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  ++    + T+    D                           
Sbjct: 80  LMDKAKRCSNKCIFCFIDQLPPGMRDTLYFKDD--------------------------- 112

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP- 216
              RL  +      + +++                  ++ + +K    P+ +++H  +P 
Sbjct: 113 -DSRLSFLQGNFVTLTNMK----------------EEDIDRIIKYHISPINVSVHTTNPE 155

Query: 217 -------YEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
                    F+   +  + RL +AGII+ SQ V + GIN+
Sbjct: 156 LRVKMLNNRFAGNILERLKRLTDAGIIINSQVVCIPGINN 195


>gi|157693043|ref|YP_001487505.1| 2-methylthioadenine synthetase [Bacillus pumilus SAFR-032]
 gi|157681801|gb|ABV62945.1| 2-methylthioadenine synthetase [Bacillus pumilus SAFR-032]
          Length = 453

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     +L S+D E  +   Q+   +   E++ T 
Sbjct: 143 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVINQAQQLVDAGYKEIVLTG 197

Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   L      K+LK L   +  ++ +R  S    ++  +I  E+I+ L ++
Sbjct: 198 IHTGGYGED---LKDYNFAKLLKELDERVNGLKRIRISS----IEASQITDEVIEVLDQS 250

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 251 DK-IVRHLHI 259


>gi|325960201|ref|YP_004291667.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
 gi|325331633|gb|ADZ10695.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
          Length = 349

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 41/84 (48%), Gaps = 6/84 (7%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTG 151
           P+ + + + + C   C +C+R+    S+ G+ +S +D +  L  +       ++++   G
Sbjct: 36  PELVDISISNYCTNDCDYCYRQ---SSETGSFMSIEDFQTCLEQLNNTKFGSVFQIALGG 92

Query: 152 GDPLILSH-KRLQKVLKTLRYIKH 174
           G+PL+     ++ ++ +    I +
Sbjct: 93  GEPLLHPDFSKMLRLTREYNIIPN 116


>gi|153815340|ref|ZP_01968008.1| hypothetical protein RUMTOR_01574 [Ruminococcus torques ATCC 27756]
 gi|145847402|gb|EDK24320.1| hypothetical protein RUMTOR_01574 [Ruminococcus torques ATCC 27756]
          Length = 442

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 25/130 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  +C +C     +       + S+ T+  L  ++    +   EV+ TG
Sbjct: 154 HTRAYIKVQDGCNQFCTYC-----IIPYARGRVRSRQTKDVLEEVRDLAGNGYKEVVLTG 208

Query: 152 GDPLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                LS         + L  ++K +  ++ ++ +R  S    ++P  I  E  + L E 
Sbjct: 209 I---HLSSYGIDFDGQRHLLDLIKEVHKVEGIERIRLGS----LEPGIITEEFAKELSEM 261

Query: 204 GKPVYIAIHA 213
            K   +  H 
Sbjct: 262 PK---VCPHF 268


>gi|147919913|ref|YP_686334.1| hypothetical protein RCIX1817 [uncultured methanogenic archaeon
           RC-I]
 gi|110621730|emb|CAJ37008.1| conserved hypothetical protein (MiaB/NifB-like) [uncultured
           methanogenic archaeon RC-I]
          Length = 422

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 13/114 (11%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           + P RI L L + C   C  C+     G ++   LS+K+ +  +    +K ++  ++FTG
Sbjct: 114 KSPLRIDLALTYRCNNNCGHCYAG---GPRQTKELSTKEWKQIIDK-AQKFEVPNIVFTG 169

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G+ L+     L++++     +  V          I + + +  E +  LK+AG 
Sbjct: 170 GESLLRED--LEELIAQAEKLGIVT-------GLITNGRLLTKERVAKLKKAGL 214


>gi|117918731|ref|YP_867923.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. ANA-3]
 gi|117611063|gb|ABK46517.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. ANA-3]
          Length = 337

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 60/160 (37%), Gaps = 17/160 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +  VC   C +C       + K   LS  + E  ++   +     ++  TGG+P +  
Sbjct: 28  MSVTDVCNFKCSYCLPDGYHPNGKQQFLSLSEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
                 +++ +         R H+     +  R+     +      + + +++ +  P  
Sbjct: 87  D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAQEWFDAGLRRINVSVDSLDPKM 139

Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
             + +      E +  I    +AG   +   +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND 179


>gi|320352978|ref|YP_004194317.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320121480|gb|ADW17026.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 350

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 32/216 (14%), Positives = 65/216 (30%), Gaps = 35/216 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  I  ++   C + C  C     +        S  + +  L  I   +    V+ +GG+
Sbjct: 5   PKWIAWEITRRCNLRCVHCRSSSQLEIDGHPDFSLTEAKRVLNEIHAYANP-VVVLSGGE 63

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
           PL+         +  +        LR        +   +  E  + +K++G + V +++ 
Sbjct: 64  PLLRPD------VFEIAAHGTSLGLRIC---LATNGSLVTAETCRDIKQSGIRMVSLSLD 114

Query: 213 ANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
            +   E  ++             AI       I  L  S   K    +      +     
Sbjct: 115 GSTA-EVHDDFRNQPGAFAGVMNAIRLFNEHQIDFLINSSFTK---RNKAEAPKIYHLVK 170

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
            L    +YL             +    G++I+  L 
Sbjct: 171 SLGATAWYLFM----------IVPTGRGEEIMEELI 196


>gi|313157725|gb|EFR57136.1| tRNA methylthiotransferase YqeV [Alistipes sp. HGB5]
          Length = 432

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 7/120 (5%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C   C +C      G  +   ++    EA       + +I       GD
Sbjct: 142 RTRAFLKVQDGCDYKCAYCTIHYARGGSRNMPIADLVAEARQIAAAGQKEIVITGINTGD 201

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
               + +R   +L+ L  ++ ++  R  S    ++P  +  E+I     + K      H 
Sbjct: 202 FGRTTGERFIDLLRALNEVEGIERYRISS----IEPNLLTDEIIAFCAASPK---FQHHF 254


>gi|306821367|ref|ZP_07454975.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304550585|gb|EFM38568.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 296

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 17/131 (12%)

Query: 87  KGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK- 141
           +G+V+R P      ++++   C    C FC    M    +  + S KD +    Y +   
Sbjct: 4   EGMVYRPPSEAYSLIVQVTTGCSQNTCTFC---AMYKEARFKIRSLKDIKEDFLYAKAHY 60

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRI---NPELI 197
             I  +    GD LI+  + L ++LK +  +  ++  +          P+ I     E +
Sbjct: 61  RGIDRIFLADGDALIMPFEDLLEILKFIEELFPNLDRV-----SLYASPRSILSKTKEQL 115

Query: 198 QCLKEAGKPVY 208
           + L+     + 
Sbjct: 116 ETLRAHNLKLA 126


>gi|299535792|ref|ZP_07049113.1| hypothetical protein BFZC1_07203 [Lysinibacillus fusiformis ZC1]
 gi|298728992|gb|EFI69546.1| hypothetical protein BFZC1_07203 [Lysinibacillus fusiformis ZC1]
          Length = 444

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 13/125 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149
             R  LK+   C  +C FC      G  +           +  +   Y++          
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPQEVLHQAQQLVDAGYLEIVLTGIHTGG 201

Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            G D   L    L ++L+ L   +K ++ LR  S    ++  ++  E+I+ L+E+ K V 
Sbjct: 202 YGQD---LKDYNLAQLLRDLEANVKGLKRLRISS----IEASQLTDEVIEVLRES-KIVV 253

Query: 209 IAIHA 213
             +H 
Sbjct: 254 NHLHI 258


>gi|298479623|ref|ZP_06997823.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. D22]
 gi|298274013|gb|EFI15574.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides sp. D22]
          Length = 152

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            C  +C  C   E      G  L+ +  ++ +  I+    +  V F+GGDP       L
Sbjct: 25  GCSHHCPGCHNPESWNPGVGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEAFL 83


>gi|297195245|ref|ZP_06912643.1| radical SAM domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|297152723|gb|EDY63581.2| radical SAM domain-containing protein [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 729

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 18/127 (14%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY----IQEKSQIW-----EV 147
           I++K+   C + C  C+  E    Q         ++ A+++    + E ++        V
Sbjct: 12  IVVKVHSRCDLACDHCYIYEHA-DQSWRTRPKAISDEAISWTALRLAEHAKSHALPSVSV 70

Query: 148 IFTGGDPLILSHKRLQKVLKTL-RYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAG 204
           I  GG+PL+   +RL++V +     ++ V    LR H+        R+N   +    E  
Sbjct: 71  ILHGGEPLLAGPERLRRVCEEFTAALEPVAALDLRIHTNGI-----RLNDRFLDLFDEFD 125

Query: 205 KPVYIAI 211
             V I++
Sbjct: 126 VRVGISL 132


>gi|260885593|ref|ZP_05735307.2| 2-methylthioadenine synthetase [Prevotella tannerae ATCC 51259]
 gi|260851662|gb|EEX71531.1| 2-methylthioadenine synthetase [Prevotella tannerae ATCC 51259]
          Length = 524

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 15/124 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  LK+   C  YC +C     R         +++   +  AA    +   +I     
Sbjct: 237 RTRYFLKVQDGCNYYCTYCTIPLARGRSRNGTIASLVGQAEAVAA----EGGKEIVLTGV 292

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
             GD    + +   ++++ L  +K ++  R  S    ++P  +  E+I    ++      
Sbjct: 293 NTGDFGRSTGETFFQLIQALDRVKGIERYRISS----IEPNLLTDEIIDFCAQSR---AF 345

Query: 210 AIHA 213
             H 
Sbjct: 346 MPHF 349


>gi|288573974|ref|ZP_06392331.1| radical SAM enzyme, Cfr family [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288569715|gb|EFC91272.1| radical SAM enzyme, Cfr family [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 341

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 44/211 (20%), Positives = 79/211 (37%), Gaps = 47/211 (22%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREM-------VGSQKGTVLSSKDTEAALAYIQEK 141
           + H       L     CP+ C FC            VG   G  L+ +        + + 
Sbjct: 97  MDHGNHHTACLSTQVGCPLRCDFCATGRQGFVRNLTVGEIVGHFLAMESW------LGQD 150

Query: 142 SQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPEL 196
             I  ++F G G+PL L+ + ++K ++ L + K     ++ +   +   +  P       
Sbjct: 151 --IKNIVFMGMGEPL-LNWENVKKAIEILNHPKMRGMGIRRITISTSGVV--PG------ 199

Query: 197 IQCLKEAGKPVYIAIHANHPY-EFS------------EEAIAAISRL-ANAGIILLSQSV 242
           I  L ++G  V ++   + P  +               + + A+       G  +  + V
Sbjct: 200 ILALADSGLDVRLSFSLHAPNDQIRSKLMPVNERYPLGQVVEALQEFQKKTGNRITVEYV 259

Query: 243 LLKGINDDP----EILANLMRTFVELRIKPY 269
           LLK IND+P    EI A L    V + + PY
Sbjct: 260 LLKRINDEPSMAYEIAALLSDLDVYINLIPY 290


>gi|215488780|ref|YP_002331211.1| coproporphyrinogen III oxidase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312968176|ref|ZP_07782386.1| radical SAM superfamily protein [Escherichia coli 2362-75]
 gi|215266852|emb|CAS11293.1| putative coproporphyrinogen oxidase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312287001|gb|EFR14911.1| radical SAM superfamily protein [Escherichia coli 2362-75]
          Length = 445

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|171186343|ref|YP_001795262.1| radical SAM domain-containing protein [Thermoproteus neutrophilus
           V24Sta]
 gi|170935555|gb|ACB40816.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta]
          Length = 368

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 69/169 (40%), Gaps = 26/169 (15%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-F 149
           H  P  +  +    CP+ C+ C R + +       L++++ +  +  +        ++  
Sbjct: 12  HSAPLIVFWESTKACPLACKHC-RADAILRPLPGELNTEEGKRLIEQVASFGDPKPLLVI 70

Query: 150 TGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           TGGDPL+ +   L  ++       +         S  P V P  ++PE ++ ++E G   
Sbjct: 71  TGGDPLMRND--LFDLVDYAVQLGVPT-------SLAPAVSPN-LSPETLKAIREHGVK- 119

Query: 208 YIAIHANHPYEFSEE-----------AIAAISRLANAGIILLSQSVLLK 245
            I+I  +   E + +            +AAI    +AG+ +   +V+ +
Sbjct: 120 AISISLDGAREETHDEIRGVPGSFRNTLAAIKAAVDAGVQVQVNTVVWR 168


>gi|91213008|ref|YP_542994.1| coproporphyrinogen III oxidase [Escherichia coli UTI89]
 gi|117625785|ref|YP_859108.1| coproporphyrinogen III oxidase [Escherichia coli APEC O1]
 gi|218560578|ref|YP_002393491.1| coproporphyrinogen III oxidase [Escherichia coli S88]
 gi|237703269|ref|ZP_04533750.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA]
 gi|331659808|ref|ZP_08360746.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA206]
 gi|91074582|gb|ABE09463.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli UTI89]
 gi|115514909|gb|ABJ02984.1| putative oxygen independent coproporphyrinogen III oxidase ChuW
           [Escherichia coli APEC O1]
 gi|218367347|emb|CAR05126.1| putative oxygen independent coproporphyrinogen III oxidase
           (chuW-like) [Escherichia coli S88]
 gi|226902533|gb|EEH88792.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA]
 gi|294491802|gb|ADE90558.1| HugW [Escherichia coli IHE3034]
 gi|307628582|gb|ADN72886.1| coproporphyrinogen III oxidase [Escherichia coli UM146]
 gi|315286173|gb|EFU45609.1| radical SAM domain protein [Escherichia coli MS 110-3]
 gi|323950177|gb|EGB46060.1| HemN protein [Escherichia coli H252]
 gi|323954735|gb|EGB50516.1| HemN protein [Escherichia coli H263]
 gi|324009284|gb|EGB78503.1| radical SAM domain protein [Escherichia coli MS 57-2]
 gi|331053023|gb|EGI25056.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA206]
          Length = 445

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|148264465|ref|YP_001231171.1| molybdenum cofactor biosynthesis protein A [Geobacter
           uraniireducens Rf4]
 gi|146397965|gb|ABQ26598.1| GTP cyclohydrolase subunit MoaA [Geobacter uraniireducens Rf4]
          Length = 326

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 32/169 (18%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLI 156
           L +   C + C +C   E +   Q G +LS +D    A   +     I ++  TGG+PL+
Sbjct: 16  LSVTDRCNLRCSYCMPAEGIPKLQHGEMLSYEDLYRVACESVAL--GIEKIRVTGGEPLV 73

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANH 215
              K L + +  L  I  ++ L   +         +  EL   L++AG   + I++    
Sbjct: 74  --RKGLVQFIGRLADIPGLKELVLTTNGL------LLGELAIPLRQAGAQRLNISL---- 121

Query: 216 PYEFSEEAIAAISR---LANA--GI---------ILLSQSVLLKGINDD 250
                 E  A I+R   L     GI          +    V++KGINDD
Sbjct: 122 -DSLKPETFARITRGGDLRKVVDGIAAAEEAGFPPVKINMVVMKGINDD 169


>gi|310659093|ref|YP_003936814.1| hypothetical protein CLOST_1789 [Clostridium sticklandii DSM 519]
 gi|308825871|emb|CBH21909.1| conserved protein of unknown function [Clostridium sticklandii]
          Length = 454

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 14/124 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C      G  +   ++  D  + +  + +     EV+ TG  
Sbjct: 162 KTRAFLKIQEGCDRFCSYCIIPYTRGPVRSRSIN--DIISEVKSLAKN-GYKEVVLTGIH 218

Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                  L   RL  V+K +  I  +  +R  S    V+P  I  + +  LKE  K    
Sbjct: 219 VASYGKDLGDIRLIDVIKAINNIDGIHRIRTSS----VEPLIITDDFLSELKEIDK---F 271

Query: 210 AIHA 213
             H 
Sbjct: 272 CPHF 275


>gi|302389502|ref|YP_003825323.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646]
 gi|302200130|gb|ADL07700.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646]
          Length = 463

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 5/126 (3%)

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMV 118
            I   +EL+ L       +  +    L+G+  +   + L L + H C + C++CF  +  
Sbjct: 59  IIEAIKELDELKARGFLFVEADLTRALEGLRQKKNVKALCLNVAHDCNLRCKYCFASKGH 118

Query: 119 GSQKGTVLSSKDTEAALAYIQEKS---QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175
            + +  ++  K  ++A+ ++ E S   +  EV F GG+PL+     ++ V+   R ++  
Sbjct: 119 YNGERRLMDKKVAQSAVDFLIEHSGNLKNLEVDFFGGEPLMAFD-TIKYVISYARSLEDR 177

Query: 176 QILRFH 181
              RFH
Sbjct: 178 CGKRFH 183


>gi|291297888|ref|YP_003509166.1| molybdenum cofactor biosynthesis protein A [Stackebrandtia
           nassauensis DSM 44728]
 gi|290567108|gb|ADD40073.1| molybdenum cofactor biosynthesis protein A [Stackebrandtia
           nassauensis DSM 44728]
          Length = 341

 Score = 41.2 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 33/192 (17%)

Query: 89  IVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           +V RY    +   + L   C + C +C   E +    +  +L+  +    +     +  +
Sbjct: 15  LVDRYGRTAVDLRVSLTDRCNLRCTYCMPAEGLAWLPRQEILTDDEIVRLVGLAVTRLGV 74

Query: 145 WEVIFTGGDPLILSHKRLQKVLKT---LRYIKHVQILR--FHSRVPIVDPQRINPELIQC 199
            +V FTGG+PL+     L  ++     L     V +       +       R+ P     
Sbjct: 75  TQVRFTGGEPLLRPA--LADIVARTTALEPRPRVSLTTNAIGLK-------RMAP----A 121

Query: 200 LKEAGK-PVYIAIHANHPYEFSE--------EAIAAISRLANAG-IILLSQSVLLKGIND 249
           L+EAG   V I++    P  F          + +  I+    AG + +   SVL++G+N+
Sbjct: 122 LREAGLDRVNISLDTLDPARFKTLAHRDRLNDTVEGIAAAKAAGLVPVKVNSVLMRGVNE 181

Query: 250 DPEILANLMRTF 261
           D E +  L    
Sbjct: 182 D-EAVPLLRFAL 192


>gi|310658965|ref|YP_003936686.1| molybdopterin biosynthesis protein a [Clostridium sticklandii DSM
           519]
 gi|308825743|emb|CBH21781.1| molybdopterin biosynthesis protein A [Clostridium sticklandii]
          Length = 316

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 63/163 (38%), Gaps = 21/163 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +  +C   C +C    +       +L  ++ E     +  ++ I ++  TGG+PL+  
Sbjct: 14  ISVTDLCNFNCEYCMPEGIEKKDHSDILRIEEIENICK-VAARNGIKKIRLTGGEPLV-- 70

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
            K +  ++  ++ I  +  +   +         +  E+ + LK AG    I +  +   E
Sbjct: 71  RKGILSLINKIKSIDEITEVAITTNGV------LLDEMAKDLKAAGLD-RINLSLDSMDE 123

Query: 219 -----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
                 +      E    +    +AG   +   +VL+  +ND+
Sbjct: 124 NVFRKITRGHELSEVYKGLESALDAGFENIKINTVLINKVNDN 166


>gi|331674993|ref|ZP_08375750.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA280]
 gi|331067902|gb|EGI39300.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA280]
          Length = 445

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|154503634|ref|ZP_02040694.1| hypothetical protein RUMGNA_01458 [Ruminococcus gnavus ATCC 29149]
 gi|260589858|ref|ZP_05855771.1| putative radical SAM domain protein [Blautia hansenii DSM 20583]
 gi|153795734|gb|EDN78154.1| hypothetical protein RUMGNA_01458 [Ruminococcus gnavus ATCC 29149]
 gi|260539665|gb|EEX20234.1| putative radical SAM domain protein [Blautia hansenii DSM 20583]
          Length = 463

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 45/77 (58%), Gaps = 5/77 (6%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFT 150
           PD ++L L   C + C++C+  +   S  G ++  +  + A+ +I E   + + + +IF 
Sbjct: 103 PDTVILMLCQECNLRCKYCYAGDGEYSNPG-IMKYEIGKKAIDFIAEFCGEKEQFNIIFF 161

Query: 151 GGDPLILSHKRLQKVLK 167
           GG+PL +  ++L+K+++
Sbjct: 162 GGEPL-MDFRKLKKLVE 177


>gi|117924283|ref|YP_864900.1| MiaB-like tRNA modifying enzyme [Magnetococcus sp. MC-1]
 gi|117608039|gb|ABK43494.1| MiaB-like tRNA modifying enzyme [Magnetococcus sp. MC-1]
          Length = 467

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 21/169 (12%)

Query: 52  PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
           P  P+ +  +    E   LP   E P+   +    KG       R  +++ + C   C F
Sbjct: 136 PRTPLRQSGLEPLAEEAPLPRWEEGPLVAADA--FKG-----QARAFVQVQNGCDKRCTF 188

Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR------LQKV 165
           C    + G  +           A +++Q      E++ TG D      ++      L ++
Sbjct: 189 CVIPALRGPSRSQSPQWV-MAQAQSFLQA--GYQELVLTGIDLGSYGREQTGQGWSLARL 245

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           ++ L  +  +  LR  S    +DP  + P LI  +  A K +   +H +
Sbjct: 246 VEQLLSLDGLARLRLSS----IDPMDMEPALIALMGRAPK-LCPHLHLS 289


>gi|330995923|ref|ZP_08319818.1| tRNA methylthiotransferase YqeV [Paraprevotella xylaniphila YIT
           11841]
 gi|329574262|gb|EGG55837.1| tRNA methylthiotransferase YqeV [Paraprevotella xylaniphila YIT
           11841]
          Length = 447

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 70/189 (37%), Gaps = 30/189 (15%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGI-VHRY--------PDRILLKLLHVCP 106
           I R     +E L +LP ER+    ++    +    +H +          R  LK+   C 
Sbjct: 113 ILRY---LEERLPLLPAERKSADAEHAAYTVPTKDIHTFVPSCSCGDRTRYFLKVQDGCD 169

Query: 107 VYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKR 161
            YC +C      G  +   ++S  +  E A           E++ TG   GD    + + 
Sbjct: 170 YYCTYCTIPYARGRSRNGSIASLVRQAEQA-----ASEGGREIVLTGVNIGDFGKTTGES 224

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEFS 220
              ++K L  ++ +   R  S    ++P  +  +++    E+        H + P    S
Sbjct: 225 FLDLVKALDRVEGIARYRISS----IEPNLLTEDVLAFCAESR---AFMPHFHIPLQSGS 277

Query: 221 EEAIAAISR 229
           +E +  + R
Sbjct: 278 DEVLKLMRR 286


>gi|320101749|ref|YP_004177340.1| 23S rRNA m(2)A-2503 methyltransferase [Isosphaera pallida ATCC
           43644]
 gi|319749031|gb|ADV60791.1| 23S rRNA m(2)A-2503 methyltransferase [Isosphaera pallida ATCC
           43644]
          Length = 400

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/206 (16%), Positives = 69/206 (33%), Gaps = 45/206 (21%)

Query: 94  PDRILLKLLHVCPVYCRFC-------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
              + +     C + C FC        R   VG     +L ++D       + E  ++  
Sbjct: 129 RRTVCVSSQVGCGMGCVFCASGLKGVERNLTVGEITEELLHARDL------LPEHERLTN 182

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVDPQRINPELIQC 199
           ++  G   +  S   L+ ++  L  I          + +   +   +  P++I  + +  
Sbjct: 183 IVVMG---MGESLANLENLIAALDRICSPSGLGLSQRAVTIST---VGLPEKI--KRLAA 234

Query: 200 LKEAGKPVYIAIH------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
           L +    + +++H             NH         AA    A  G  +  + VLL GI
Sbjct: 235 L-DRRYHLAVSLHAPTEELRDQLVPINHKVGLRAVMEAADHYFAVTGRQVTFEYVLLGGI 293

Query: 248 NDDPEILANLMRTF--VELRI--KPY 269
           ND      +L+      +  +   PY
Sbjct: 294 NDRDRDARDLVALLAGRKAHVNLIPY 319


>gi|168334360|ref|ZP_02692544.1| molybdopterin cofactor biosynthesis protein A, putative
           [Epulopiscium sp. 'N.t. morphotype B']
          Length = 299

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 27/161 (16%)

Query: 101 LLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + + C + C +C     VG+ K     L+  + E  +A I     I +V  TGG+PLI S
Sbjct: 1   MTNRCNLKCIYC-----VGADKFEAKYLTIDEIER-VANIFATLGITKVKLTGGEPLIRS 54

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
              L  ++K LR    V+ +   +         +  + +  L  AG    I +  +    
Sbjct: 55  D--LANIVKRLRSAGMVE-VTLTTNGL------LLEQKLTTLIAAGVT-AINVSLDAIDG 104

Query: 219 FSEEA---IAAISRLANA------GIILLSQSVLLKGINDD 250
            + EA   +AA++++  A       +     S+L+KG ND 
Sbjct: 105 ATFEALTGVAAVNKVMQAVEASAKVVPTKINSLLIKGTNDS 145


>gi|289423981|ref|ZP_06425773.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L]
 gi|289155617|gb|EFD04290.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L]
          Length = 380

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 13/117 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +      CP  C FC ++++ G         +      +L  I + +++    F G    
Sbjct: 8   IFVPHQGCPHDCIFCNQKKITGLSTSMTDEDARDIIIESLKTIPDDAEVEIAFFGGS--F 65

Query: 156 ILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                   ++L  V K  + +  V  +R  +R     P  I+   +  LKE G  + 
Sbjct: 66  TAIDTDIQRKLLSVAKDFKDMGKVDDIRLSTR-----PDCIDDRELDLLKEYGVTII 117


>gi|218691787|ref|YP_002399999.1| coproporphyrinogen III oxidase [Escherichia coli ED1a]
 gi|218429351|emb|CAR10315.2| putative oxygen independent coproporphyrinogen III oxidase
           (chuW-like) [Escherichia coli ED1a]
          Length = 445

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEREADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|218702268|ref|YP_002409897.1| coproporphyrinogen III oxidase [Escherichia coli IAI39]
 gi|218372254|emb|CAR20116.1| putative oxygen independent coproporphyrinogen III oxidase
           (chuW-like) [Escherichia coli IAI39]
          Length = 445

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|319651610|ref|ZP_08005737.1| hypothetical protein HMPREF1013_02349 [Bacillus sp. 2_A_57_CT2]
 gi|317396677|gb|EFV77388.1| hypothetical protein HMPREF1013_02349 [Bacillus sp. 2_A_57_CT2]
          Length = 450

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 19/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C FC      G  + +    +    A   +       E++ T   
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKEVIRQAQQLVDA--GYKEIVLTGIH 198

Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D   +    L  +L+ L   +K ++ LR  S    ++  +I  E+I+ + ++ K
Sbjct: 199 TGGYGED---MKDYNLAMLLRDLEAQVKGLKRLRISS----IEASQITDEVIEVMDQS-K 250

Query: 206 PVYIAIHA 213
            V   +H 
Sbjct: 251 VVVRHLHI 258


>gi|307298742|ref|ZP_07578545.1| MiaB-like tRNA modifying enzyme [Thermotogales bacterium
           mesG1.Ag.4.2]
 gi|306915907|gb|EFN46291.1| MiaB-like tRNA modifying enzyme [Thermotogales bacterium
           mesG1.Ag.4.2]
          Length = 425

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 18/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGS----QKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  L +   C   C +C R  +        K   L  ++ E  ++         E++ 
Sbjct: 132 RTRAFLGIEDGCLNCCSYC-RVRLARGSKIISKPIDLVKREFEGLVS-----RGYREIVL 185

Query: 150 TGGDPLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +           L K+L  L  ++    +R  S    +DP R++ EL+  +  + + 
Sbjct: 186 TGINIGYYGFDLDSSLVKLLIELDKLEGEWRIRLGS----LDPDRVDGELLHLITTSRR- 240

Query: 207 VYIAIHAN 214
           +   +H +
Sbjct: 241 MARHLHLS 248


>gi|291529131|emb|CBK94717.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale M104/1]
          Length = 434

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 32/162 (19%)

Query: 70  LPEEREDPIGDNNHSPLKGIVH----------RYPDRILLKLLHVCPVYCRFCFRREMVG 119
           L E   D + D       G  H          +   R  +K+   C  +C +C      G
Sbjct: 109 LEEYSLDSVNDTVDDINDG-KHDFEELFIDQTKEHTRAFIKVQDGCNQFCSYCIIPYARG 167

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRY 171
             +      ++  A +  +       EV+ TG     LS           L ++++ +  
Sbjct: 168 RVRSRRF--ENVIAEVERLAAN-GFKEVVLTGI---HLSSYGVDFEEATGLLELIQAVNA 221

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           +K ++ +R  S    ++P+ +       L +  K   I  H 
Sbjct: 222 VKGIERIRLGS----LEPKIVTEHFASELSKLDK---ICPHF 256


>gi|291525036|emb|CBK90623.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale DSM 17629]
          Length = 434

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 32/162 (19%)

Query: 70  LPEEREDPIGDNNHSPLKGIVH----------RYPDRILLKLLHVCPVYCRFCFRREMVG 119
           L E   D + D       G  H          +   R  +K+   C  +C +C      G
Sbjct: 109 LEEYSLDSVNDTVDDINDG-KHDFEELFIDQTKEHTRAFIKVQDGCNQFCSYCIIPYARG 167

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRY 171
             +      ++  A +  +       EV+ TG     LS           L ++++ +  
Sbjct: 168 RVRSRRF--ENVIAEVERLAAN-GFKEVVLTGI---HLSSYGVDFEEATGLLELIQAVNA 221

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           +K ++ +R  S    ++P+ +       L +  K   I  H 
Sbjct: 222 VKGIERIRLGS----LEPKIVTEHFASELSKLDK---ICPHF 256


>gi|269957895|ref|YP_003327684.1| Radical SAM domain-containing protein [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269306576|gb|ACZ32126.1| Radical SAM domain protein [Xylanimonas cellulosilytica DSM 15894]
          Length = 376

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 14/119 (11%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIF 149
            R P  +  +L   C + CR C R E V       L+++   A L  IQ     +  V+ 
Sbjct: 25  QRSPMIVYWELTTACGLACRHC-RAEAVRQPLPGELTTRQALAVLDQIQGFGDPLPHVVM 83

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILR-FH-SRVPIVDPQRINPELIQCLKEAGKP 206
           TGGDPL  +   L  ++            R    S  P V P  +N + ++ L+E+G  
Sbjct: 84  TGGDPLRRAD--LDLLIDAATE-------RGIGVSLAPAVTP-LLNRDRLEGLRESGVQ 132


>gi|154685441|ref|YP_001420602.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens FZB42]
 gi|154351292|gb|ABS73371.1| HemZ [Bacillus amyloliquefaciens FZB42]
          Length = 500

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 78/233 (33%), Gaps = 45/233 (19%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131
           I D   + +  +     +  +   +  CP  C +C         +   + S         
Sbjct: 154 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 213

Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
           +    +++    ++  + F GG P  ++ + +  + + + R    V  +R  + V    P
Sbjct: 214 QKIGEWLKRHDIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVANIREIT-VEAGRP 272

Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
             I  E +  L +     + I      P  +  E + AI R           +V      
Sbjct: 273 DTITEEKLAVLNKYKIDRISIN-----PQSYENETLKAIGR---------HHTV------ 312

Query: 249 DDPEILAN--LMRTFVELRIKPYYLHHPDLA-----AGTSHFRLTIEEGQKIV 294
              E +    L R      I      + DL       GT+ FR ++EE +K++
Sbjct: 313 --EETIEKYHLSRKHGMNNI------NMDLIIGLPGEGTAEFRHSLEETEKLM 357


>gi|153873510|ref|ZP_02002070.1| radical SAM family protein [Beggiatoa sp. PS]
 gi|152070023|gb|EDN67929.1| radical SAM family protein [Beggiatoa sp. PS]
          Length = 356

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 36/168 (21%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEV 147
           YP  +++ +   C + C++CF       Q+  +      +  LA I+E     +S+I   
Sbjct: 9   YPSVVVVNITTACNLRCKYCFADCEPSQQREDMTE----DVMLAIIREMLVLPESEIITF 64

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-----KHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            F GG+P  L+   +++ +     +     K V+  R  S   +     I  ELI  LK+
Sbjct: 65  EFQGGEP-TLNIVGIERFISIAEQLKTSSNKTVKY-RIESNGTV-----ITDELITLLKK 117

Query: 203 AGKPVYIAIHANHPYEFSEEAI-------------AAISRLANAGIIL 237
               + I I  + P + +  A                I +L   GI +
Sbjct: 118 Y--NMEIGISIDGPMDMTNNARVYEDGTGAFTDIENGIKKLHENGIKV 163


>gi|28804570|dbj|BAC57983.1| hypothetical protein [Leptospira interrogans]
          Length = 264

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 29/160 (18%)

Query: 56  IARQFIPQKEELNILPEEREDPIGD--NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC- 112
           I R+  P   EL+    E  D + +     S ++     Y     +K+   C   C FC 
Sbjct: 93  ILREKFP---ELSPSQLEFNDSLLERWKLSSKIENYSKPY---AYVKVSDGCNRGCSFCI 146

Query: 113 ---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKV 165
              FR + V S    +L  +DT  A+       +I     + ++ G D      + L  +
Sbjct: 147 IPSFRGKFVESPLDDIL--RDTNRAIR--AGAKEICLVSQDTVYYGRDS-----EILLDM 197

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           ++ +  I  ++ILR       + P +   +LI+ + E  K
Sbjct: 198 VRKVAEIDSLEILRL----LYLYPDKKTEKLIRLMGETSK 233


>gi|194334092|ref|YP_002015952.1| radical SAM domain-containing protein [Prosthecochloris aestuarii
           DSM 271]
 gi|194311910|gb|ACF46305.1| Radical SAM domain protein [Prosthecochloris aestuarii DSM 271]
          Length = 346

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 65/163 (39%), Gaps = 25/163 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           ++L +   C + C +C+  E      G  +S +  E A+  +    + + +  +GG+PL+
Sbjct: 9   LILVVTRSCNLSCVYCY--ENACRHDGAAMSLQTAEQAVGLVAASGKPFHIQLSGGEPLL 66

Query: 157 LSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
                    ++++  + I     +   +   +     ++ E+I+ L   G  + +++  +
Sbjct: 67  APDTIFAVMELIRK-KGIP--AFVSLQTNGVL-----LDREMIRSLNGYGVSIGLSL--D 116

Query: 215 HPYEFSEEAI-------AAISRLANAGIILLSQSVLLKGINDD 250
            P    EE          A+  L + G+     +V    ++D 
Sbjct: 117 GPPRLQEELRGGSAATYRALRLLEDEGVPFRVTTV----VSDC 155


>gi|110638137|ref|YP_678346.1| 2-methylthioadenine synthetase [Cytophaga hutchinsonii ATCC 33406]
 gi|110280818|gb|ABG59004.1| possible 2-methylthioadenine synthetase [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 438

 Score = 41.2 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 35/160 (21%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C   C FC      GS +   ++  +       I     + E++ TG  
Sbjct: 140 RTRTFLKVQDGCDYSCSFCTIPLARGSSRSDTIA--NIVKTAKEIAA-KDVKEIVLTGVN 196

Query: 152 -GDPLILS----HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
            GD  I+S       L  ++K L  ++ ++  R  S    ++P  +  E+I  +  + + 
Sbjct: 197 IGDYGIISGTRTTSFLD-LIKELDKVEGIERFRISS----IEPNLLTDEIISFVSTSRR- 250

Query: 207 VYIAIHANHP-----------------YEFSEEAIAAISR 229
                H + P                  E   E + AI +
Sbjct: 251 --FVPHFHIPLQSGNDKILKLMRRRYKRELYAERVEAIKK 288


>gi|296328080|ref|ZP_06870614.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
 gi|296154856|gb|EFG95639.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           nucleatum subsp. nucleatum ATCC 23726]
          Length = 348

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148
           ++ +  +      CP  C FC ++++ G +    +S  D +  +  Y++      I +V 
Sbjct: 2   KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59

Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG         L ++ L+ ++  I +  V+ +R  +R     P+ I+ E++  LK+ G
Sbjct: 60  FFGG-TFTGISINLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113

Query: 205 KPVY 208
               
Sbjct: 114 VKTI 117


>gi|168700820|ref|ZP_02733097.1| Radical SAM [Gemmata obscuriglobus UQM 2246]
          Length = 277

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 30/176 (17%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCF-----RREMVGSQKGTVLSSKDTEAALAYI 138
           SP  G + R            C   C +C+     +     ++ G  +++K   AALA  
Sbjct: 11  SPATGFIRRGGFEWTCNPYVGCTFGCTYCYAAFLPQNRRPANEWGKWITAKKNAAALAEK 70

Query: 139 QEKSQIWEVIF--TGGDP-------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
           Q      + ++  +  DP       L+L+   L+ +L       H   L   +R P+V  
Sbjct: 71  QATKVAGQPVYLSSVTDPYQPAERSLMLTRGILEALL------PHQPRLTIQTRGPLVV- 123

Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPY-EFSEEAI------AAISRLANAGIILL 238
            R + ++++  +     V I   +     +F  +A        A+ +L +AG+ + 
Sbjct: 124 -R-DIDVLKDFRSLRVNVSIPTDSERVRQQFEPKAPPLEGRWDAVQQLKDAGVSVG 177


>gi|187924899|ref|YP_001896541.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           phytofirmans PsJN]
 gi|187716093|gb|ACD17317.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           phytofirmans PsJN]
          Length = 369

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R +            +LS ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRAVFDKDYTFLPHSALLSFEEIERLARLFVAH-GVEKIRLTGGE 99

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K L+ +++ L  +
Sbjct: 100 PLL--RKNLEFLIERLAQL 116


>gi|295677201|ref|YP_003605725.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
           CCGE1002]
 gi|295437044|gb|ADG16214.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
           CCGE1002]
          Length = 369

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R +            +LS ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRAVFDKDYAFLPHSALLSFEEIERLAQQFVAH-GVEKIRLTGGE 99

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K L+ ++  L  +
Sbjct: 100 PLL--RKNLEFLIDRLARL 116


>gi|206890348|ref|YP_002249124.1| AstB/chuR-related protein [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206742286|gb|ACI21343.1| AstB/chuR-related protein [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 405

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 17/100 (17%)

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR----------REMVGSQKGTVLSSKDT 131
             SP+  +  RY +   L++ + C + C+ CF              V   K   LS +  
Sbjct: 87  EQSPIPSL--RYLE---LQITNRCNLRCKHCFVNSGTCQKKKFSHFVDIDKSQELSFEKI 141

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSH-KRLQKVLKTLR 170
           +  L   ++   +  V+ TGG+PL+ S  K++   +K L 
Sbjct: 142 KKTLKEFEKMQGLR-VLITGGEPLLHSEFKKINNFIKDLA 180


>gi|170680480|ref|YP_001745771.1| coproporphyrinogen III oxidase [Escherichia coli SMS-3-5]
 gi|170518198|gb|ACB16376.1| putative coproporphyrinogen III oxidase [Escherichia coli SMS-3-5]
          Length = 445

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|157960282|ref|YP_001500316.1| radical SAM domain-containing protein [Shewanella pealeana ATCC
           700345]
 gi|157845282|gb|ABV85781.1| Radical SAM domain protein [Shewanella pealeana ATCC 700345]
          Length = 294

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 48/233 (20%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           ++L++ + C    C FC        +     + K  +  ++    ++ I  V    GD +
Sbjct: 18  LILQVTNGCSWNQCSFCDMYTQPQKRFRAQKADKIEQDLISVANSQAHISRVFLADGDAM 77

Query: 156 ILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKPVYIA 210
            L   RL+ +   ++  + +V      +R+     P+ I    PE +Q L+E G  +   
Sbjct: 78  TLPFARLEAICLLIKKYLPNV------TRISSYCLPRNINNKTPEQLQRLRELGLSLLYI 131

Query: 211 IHANHPYEFSEEAIA---------AISRLANAGI----ILLSQSVLLKGIN---DDPEIL 254
              +   E  E             A+ ++  AGI    ++L+    L G+       E  
Sbjct: 132 GCESGDDEVLERIKKGETFDSSLAALQKIKAAGIKASVMILN---GLAGVELSKQHAENS 188

Query: 255 ANLMRTFVELRIKPYYLHHPDLA--AGTS--------HFRLTIEEGQKIVASL 297
           A LM        +P YL    +    GT         HF+L  +   ++   +
Sbjct: 189 AKLMNA-----AQPEYLSTLVVTLPLGTERMDEAFGGHFQLPNQ--AQLFEEM 234


>gi|331089440|ref|ZP_08338339.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 3_1_46FAA]
 gi|330404808|gb|EGG84346.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 3_1_46FAA]
          Length = 440

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 10/113 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             LK+   C  +C +C     +     +V   +  + A   + E+     ++      L 
Sbjct: 146 AYLKIAEGCDKHCTYCII-PKIRGNFRSVPMERLIKEAKE-LAEQGVKELILVAQETTLY 203

Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                  K L ++++ L  I  ++ +R         P+ I  ELI+ +K+  K
Sbjct: 204 GKDLYGEKCLHRLVEELCKIAGIRWIRI----LYCYPEEITDELIEVIKKEPK 252


>gi|304384048|ref|ZP_07366503.1| 2-methylthioadenine synthetase [Prevotella marshii DSM 16973]
 gi|304334836|gb|EFM01111.1| 2-methylthioadenine synthetase [Prevotella marshii DSM 16973]
          Length = 443

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C        +          E A      +    E++ TG +
Sbjct: 153 RTRYFLKVQDGCDYFCTYCTI-PFARGRSRNPSIESLVEQAET--AARQGGKEIVLTGVN 209

Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
               S      L +++KTL  ++ +Q  R  S    ++P  ++ ELI    E+       
Sbjct: 210 IGEFSTAEGLGLLELVKTLDCVEGIQRFRISS----IEPDLLDDELIAYCAESR---AFM 262

Query: 211 IHA 213
            H 
Sbjct: 263 PHF 265


>gi|210622624|ref|ZP_03293284.1| hypothetical protein CLOHIR_01232 [Clostridium hiranonis DSM 13275]
 gi|210154125|gb|EEA85131.1| hypothetical protein CLOHIR_01232 [Clostridium hiranonis DSM 13275]
          Length = 445

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 26/126 (20%)

Query: 92  RYPDR----ILLKLLHVCPVYCRFC--------FRREMVGS--QKGTVLSSKDTEAALAY 137
           RY         LK+   C  +C +C        +R   +    ++   L+++  +  +  
Sbjct: 138 RYVSTPEHMAYLKIGEGCSNHCTYCIIPKLRGKYRSRKIEDIVEEAKTLAAEGVKELVV- 196

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
           I +     +    G D  +    +L ++L+ L  I+ ++ +R         P+ I  +LI
Sbjct: 197 IAQ-----DTTRYGED--LYGEAKLAELLEELAGIEGIKWIRI----MYSYPESITEKLI 245

Query: 198 QCLKEA 203
             +   
Sbjct: 246 DVIAAH 251


>gi|317500459|ref|ZP_07958683.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|316898214|gb|EFV20261.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium
           8_1_57FAA]
          Length = 440

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 10/113 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             LK+   C  +C +C     +     +V   +  + A   + E+     ++      L 
Sbjct: 146 AYLKIAEGCDKHCTYCII-PKIRGNFRSVPMERLIKEAKE-LAEQGVKELILVAQETTLY 203

Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                  K L ++++ L  I  ++ +R         P+ I  ELI+ +K+  K
Sbjct: 204 GKDLYGEKCLHRLVEELCKIAGIRWIRI----LYCYPEEITDELIEVIKKEPK 252


>gi|281180540|dbj|BAI56870.1| putative coproporphyrinogen oxidase [Escherichia coli SE15]
          Length = 445

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + +   I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSGPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|7963892|gb|AAF71374.1|AF262989_1 iron-sulfur modifier protein [Klebsiella pneumoniae]
          Length = 395

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 48/233 (20%), Positives = 86/233 (36%), Gaps = 36/233 (15%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKL-LHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAA 134
           P+     SP+   +H     IL+K     C + CR+C+       +     +     E  
Sbjct: 13  PLAAEPRSPVP--LH-----ILMKPIGPACNLACRYCY---YPQDETPVNKMDDARLEQF 62

Query: 135 L-AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVD 188
           +  YI  +     +I   ++ GG+PL+      +K L    RY      +   S     +
Sbjct: 63  IRRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTN 118

Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V-- 242
              IN    +  +E G  + +++  N   + +        S  + A  GI LL Q  V  
Sbjct: 119 GTLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVGF 178

Query: 243 -LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
            LL  + N+     A +    V L  + Y    P ++ G +     + EG ++
Sbjct: 179 NLLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225


>gi|297569896|ref|YP_003691240.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925811|gb|ADH86621.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 355

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 39/216 (18%), Positives = 73/216 (33%), Gaps = 35/216 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  +  ++   C + C  C     + +++    S  + +  L  I   +    V+ +GG+
Sbjct: 5   PKWLAWEITRRCNLNCVHCRSSSELEAKEHPDFSFDEAKRILDDIASYASP-VVVLSGGE 63

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL      L+  +  +      + LR        +   +N ++ + LKEAG  +      
Sbjct: 64  PL------LRDDVFEIAAYGTGKGLRMC---LATNGTLVNEQVCRRLKEAGIRMVSLSLD 114

Query: 209 -----IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
                +  +  N P  F    I A        I  L  S   K    +   +  + R   
Sbjct: 115 GADATVHDNFRNQPGAFDG-TINAARLFKEHDIPFLINSSFTK---RNQAEIPKVYRLAK 170

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           EL  K +Y+             +    G+ I+A L 
Sbjct: 171 ELGAKAWYMFM----------IVPTGRGEDIMAELI 196


>gi|196232689|ref|ZP_03131540.1| Radical SAM domain protein [Chthoniobacter flavus Ellin428]
 gi|196223149|gb|EDY17668.1| Radical SAM domain protein [Chthoniobacter flavus Ellin428]
          Length = 368

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 8/80 (10%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
            +VC VYC+FC        +   VLS +  +  L  +     +  ++  G  P +     
Sbjct: 76  TNVCNVYCKFCAFYRTEKDEDHYVLSHEQLDQKLDELSAIGGVQILLQGGHHPKL----D 131

Query: 162 LQKVLKTLRYI----KHVQI 177
           +   L  L +I     H+ I
Sbjct: 132 IDWYLAMLSHIREKYPHINI 151


>gi|7963896|gb|AAF71376.1|AF262990_1 iron-sulfur modifier protein [Klebsiella pneumoniae]
          Length = 395

 Score = 41.2 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 83/232 (35%), Gaps = 34/232 (14%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135
           P+     SP+   +   P      +   C + CR+C+       +     +     E  +
Sbjct: 13  PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDETPVNKMDDARLEQFI 63

Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189
             YI  +     +I   ++ GG+PL+      +K L    RY      +   S     + 
Sbjct: 64  RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119

Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242
             IN    +  +E G  + +++  N   + +        S  + A  GI LL Q  V   
Sbjct: 120 TLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVGFN 179

Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           LL  + N+     A +    V L  + Y    P ++ G +     + EG ++
Sbjct: 180 LLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225


>gi|289422296|ref|ZP_06424147.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptostreptococcus anaerobius 653-L]
 gi|289157301|gb|EFD05915.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Peptostreptococcus anaerobius 653-L]
          Length = 378

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 9/116 (7%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGGD 153
           ++ +   +  C   C +C     VG  +         E  +  Y+ +K  I+ +   GG 
Sbjct: 4   NKAIYIHIPFCAKKCYYCDFTSYVGRDEEINSYLDSLEKEMDLYMDKKEDIYSIFIGGGT 63

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL---RFHSRVPIVDPQRINPELIQCLKEAGKP 206
           P +LS  +L ++   +    +++ L      S     +P  +  + ++ +K+ G  
Sbjct: 64  PSLLSPDQLDRLFGIIEKKVNLESLCEYTIES-----NPGTLTRDKLRTMKKHGVN 114


>gi|288555141|ref|YP_003427076.1| hypothetical protein BpOF4_10655 [Bacillus pseudofirmus OF4]
 gi|288546301|gb|ADC50184.1| hypothetical protein BpOF4_10655 [Bacillus pseudofirmus OF4]
          Length = 370

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 16/119 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                +C + C  C     +  +  T L     +  +  + E   +     TGG+P +LS
Sbjct: 34  FTTTTLCNMRCEHCAVGYTLQHKDPTPLP---LDLLIMRLDEIPHLKAFSITGGEP-MLS 89

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
            K + + +  L    H + +R           +IN  L   LK   K  P    +H +H
Sbjct: 90  MKSVDQYVVPLLKYAHERGVR----------TQINSNLTLDLKRYEKIIPYLDVLHISH 138


>gi|260892512|ref|YP_003238609.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4]
 gi|260864653|gb|ACX51759.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4]
          Length = 437

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 16/116 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152
             R  LK+   C  +C +C     V     +       +AA  ++QE     E++ TG  
Sbjct: 147 RTRAFLKVQEGCRDFCTYCI-VPYVRGPCRSRPLEAVLKAARRFLQE--GFVELVLTGTH 203

Query: 153 ------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
                 D  +     L  +++ L     ++ LR  S    ++P  +  +LI+ ++ 
Sbjct: 204 LGLYGQD--LTPSLTLAHLVERLLEFPELKRLRLSS----IEPLEVTADLIELMRR 253


>gi|163783641|ref|ZP_02178630.1| predicted glycyl radical activating enzyme [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159881134|gb|EDP74649.1| predicted glycyl radical activating enzyme [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 209

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+  +  C   CR C    +V  ++   ++ ++    L  +     I  ++ +GG+P + 
Sbjct: 21  LVLFMKGCNFRCRHCHNWRLVVGEEKEEITEREV---LYEVSSNPVIDTLVLSGGEPTVH 77

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182
           + K+L   +  ++    +  +R  +
Sbjct: 78  NPKKLMDFILRVKSRNPLIKIRVDT 102


>gi|324326187|gb|ADY21447.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 337

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G+      +  +LS  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGADYAFLQEEFLLSFDEIERLARLFIGM-GVEKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L +++  L  ++ ++ +   +    +  Q       + LKEAG K V I++ 
Sbjct: 77  PLLRKD--LSQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKTLKEAGLKRVNISLD 128

Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
               H     N     ++  +  I      G+ +    V+ KG+ND 
Sbjct: 129 AIEDHVFQTINGRNVSTKPVLKGIEAAKAIGLEVKVNMVVKKGMNDS 175


>gi|238619042|ref|YP_002913867.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4]
 gi|238380111|gb|ACR41199.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4]
          Length = 394

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 17/116 (14%)

Query: 69  ILPEEREDPIGDNNHSPLKGIVH------RYPDRIL---LKLLHVCPVYCRFCFRREMVG 119
           I+PE  +D I +   +  + +        R P  +L   L L + C   C +CF++   G
Sbjct: 37  IVPEHLKDIIEEGFSAADEDLEEEIDKFLRKP--VLEPTLVLTYNCNFDCIYCFQK---G 91

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
            +K   +S K     + YI++  +  +V  T  GG+PL L  ++++++ + L  +K
Sbjct: 92  FRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146


>gi|227826907|ref|YP_002828686.1| radical SAM protein [Sulfolobus islandicus M.14.25]
 gi|227458702|gb|ACP37388.1| Radical SAM domain protein [Sulfolobus islandicus M.14.25]
          Length = 394

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 17/116 (14%)

Query: 69  ILPEEREDPIGDNNHSPLKGIVH------RYPDRIL---LKLLHVCPVYCRFCFRREMVG 119
           I+PE  +D I +   +  + +        R P  +L   L L + C   C +CF++   G
Sbjct: 37  IVPEHLKDIIEEGFSAADEDLEEEIDKFLRKP--VLEPTLVLTYNCNFDCIYCFQK---G 91

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
            +K   +S K     + YI++  +  +V  T  GG+PL L  ++++++ + L  +K
Sbjct: 92  FRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146


>gi|168335412|ref|ZP_02693503.1| MiaB-like tRNA modifying enzyme YliG [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 446

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 10/108 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             +K+   C  +C +C    + G  + +    K  E  +  + E   + E+I    +  +
Sbjct: 149 AYIKIAEGCNSHCTYCIIPSLRGQYR-SRPKEKIVEEVMQ-LAED-GVSEIILVAQNTTM 205

Query: 157 LSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
               +   L  +L+ L  I  ++ +R         P+ I  ELI+ +K
Sbjct: 206 YGIDKGYTLTNLLQELSDIDGIEWIRI----LYCYPENITDELIEEIK 249


>gi|257063746|ref|YP_003143418.1| MiaB-like tRNA modifying enzyme [Slackia heliotrinireducens DSM
           20476]
 gi|256791399|gb|ACV22069.1| MiaB-like tRNA modifying enzyme [Slackia heliotrinireducens DSM
           20476]
          Length = 409

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 9/122 (7%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           +P R+ +K+   C   C FC    +   +  +         A  Y   +  + E++ TG 
Sbjct: 139 FPTRVGIKVQDGCNNACTFCI-VHVARGRAWSRPYKDVVAEAGEY--ARRGVREIVLTGI 195

Query: 153 D--PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           +          L ++L  L         R  S    V+P  ++ + I  +  +   +   
Sbjct: 196 NLGAYRTEDADLVRLLDGLLEAAPNTRFRLSS----VEPHTLSDDFIGLMAASDGRICRH 251

Query: 211 IH 212
           +H
Sbjct: 252 LH 253


>gi|167770639|ref|ZP_02442692.1| hypothetical protein ANACOL_01985 [Anaerotruncus colihominis DSM
           17241]
 gi|167667234|gb|EDS11364.1| hypothetical protein ANACOL_01985 [Anaerotruncus colihominis DSM
           17241]
          Length = 457

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF           ++S +   AA+ Y+ + S      EV   GG+PL
Sbjct: 101 LHIAHDCNLRCKYCFADTGEYMGHRELMSPETGRAAIDYLIDHSAGRHNLEVDLFGGEPL 160

Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
            ++ + +++V++  R ++  H ++ RF
Sbjct: 161 -MNFETVREVVRYARSLEKKHGKLFRF 186


>gi|126652827|ref|ZP_01724972.1| Fe-S oxidoreductase [Bacillus sp. B14905]
 gi|126590363|gb|EAZ84483.1| Fe-S oxidoreductase [Bacillus sp. B14905]
          Length = 449

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 13/125 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149
             R  LK+   C  +C FC      G  +           +  +   Y++          
Sbjct: 147 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPQEVLHQAQQLVDAGYLEIVLTGIHTGG 206

Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            G D   L    L ++L+ L   +K ++ LR  S    ++  ++  E+I  L+E+ K V 
Sbjct: 207 YGQD---LKDYNLAQLLRDLEANVKGLKRLRISS----IEASQLTDEVIDVLRES-KIVV 258

Query: 209 IAIHA 213
             +H 
Sbjct: 259 NHLHI 263


>gi|307244383|ref|ZP_07526494.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
 gi|306492202|gb|EFM64244.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
          Length = 462

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQK---GTVLSSKDTEAALAYIQEKSQIWEVI 148
           R P ++LL+L + C + C  CF       +       LS +D    +  I +   ++E++
Sbjct: 122 RSPLKVLLELTYSCNLRCIHCFADADFCCENRMVQNELSYEDWCKIIDNIIKN-DVFEIL 180

Query: 149 FTGGDPLILSHKRLQ 163
            +GG+   +    ++
Sbjct: 181 LSGGEA-TMRDDLIK 194


>gi|315502559|ref|YP_004081446.1| miab-like tRNA modifying enzyme ylig [Micromonospora sp. L5]
 gi|315409178|gb|ADU07295.1| MiaB-like tRNA modifying enzyme YliG [Micromonospora sp. L5]
          Length = 500

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 33/166 (19%)

Query: 81  NNHSPLKG---IVHRYPD--RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDT 131
           + H+P      + HR        LKL   C   C FC    FR   V      +L+  + 
Sbjct: 169 DAHTPAHLRQVLRHRLDTGPVASLKLASGCDRRCAFCAIPAFRGAFVSRTPDELLAEAEW 228

Query: 132 EAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            A       K+ + E++         G D  +   + L+K+L  L  I  +  +R     
Sbjct: 229 LA-------KTGVRELVLVSENSTSYGKD--LGDPRALEKLLPQLAAIDGIVRVR----A 275

Query: 185 PIVDPQRINPELIQCLKEA-GKPVYIAIHANHPYEFSEEAIAAISR 229
             + P    P L++ +    G   Y  +   H  E     +  + R
Sbjct: 276 SYLQPAETRPGLVEVIATTPGVAAYFDLSFQHSSE---PVLRRMRR 318


>gi|229829019|ref|ZP_04455088.1| hypothetical protein GCWU000342_01104 [Shuttleworthia satelles DSM
           14600]
 gi|229792182|gb|EEP28296.1| hypothetical protein GCWU000342_01104 [Shuttleworthia satelles DSM
           14600]
          Length = 449

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 36/210 (17%), Positives = 75/210 (35%), Gaps = 47/210 (22%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           LL     C   C FCF  +     + T+    D +  L+++Q       V  T      +
Sbjct: 86  LLDDYRSCSNACLFCFIDQNPPGMRKTIYFKDD-DTRLSFLQGN----YVTLT-----NM 135

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
             + + +++     ++ + +      V   +P          L+E        +H     
Sbjct: 136 KEEEIDRLIA--YRMEPINV-----SVQATEP---------LLREK------MLH----N 169

Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277
            F+ + +  + +L +A I +  Q VL KG+ND   +   +          PY      + 
Sbjct: 170 RFAGQLMDKLKKLYDAEISMNGQVVLCKGLNDKEHLDRTIKDLLSFY---PYMGTLSVVP 226

Query: 278 AGTSHFRLTI--------EEGQKIVASLKE 299
            G + FR  +        E+ +++V  ++ 
Sbjct: 227 VGLTRFRQGLYPLKPFKKEDAREVVEQIRR 256


>gi|171909566|ref|ZP_02925036.1| hypothetical protein VspiD_00300 [Verrucomicrobium spinosum DSM
           4136]
          Length = 320

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 17/130 (13%)

Query: 89  IVHRYPDRILLKL------LHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEK 141
           + H    R+ L          +C   CRFC R +          +S       L  + + 
Sbjct: 37  LQHDARTRVPLFAKLELSLTGLCNRKCRFCPRSDASFFPNVNEHMSDALLHGMLDELAQA 96

Query: 142 SQIWEVIFTG-GDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQC 199
                V  +G G+PL+    R+++++ T+  +  H +I        + +  R+   L + 
Sbjct: 97  GWKGTVSLSGFGEPLLHP--RIREIVGTIHRVLPHARI------EMVSNGDRLTAGLARD 148

Query: 200 LKEAGKPVYI 209
           L +AG  V +
Sbjct: 149 LFDAGLHVLV 158


>gi|168184612|ref|ZP_02619276.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
 gi|237795842|ref|YP_002863394.1| MiaB family RNA modification protein [Clostridium botulinum Ba4
           str. 657]
 gi|182672297|gb|EDT84258.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf]
 gi|229260716|gb|ACQ51749.1| RNA modification enzyme, MiaB family [Clostridium botulinum Ba4
           str. 657]
          Length = 445

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 27/135 (20%)

Query: 91  HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           H+Y D       RIL    +         C  +C +C    + G  +      ++    +
Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184

Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
             + ++  + E+I    D  +        K L ++L+ +  +K V+ +R         P+
Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVKGVKWIRL----LYCYPE 239

Query: 191 RINPELIQCLKEAGK 205
            I  ELI+ +K   K
Sbjct: 240 EITNELIEEIKSNDK 254


>gi|152969099|ref|YP_001334208.1| putative iron-sulfur modifier protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|329998396|ref|ZP_08303095.1| anaerobic sulfatase maturase [Klebsiella sp. MS 92-3]
 gi|150953948|gb|ABR75978.1| putative iron-sulfur modifier protein [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|328538696|gb|EGF64788.1| anaerobic sulfatase maturase [Klebsiella sp. MS 92-3]
          Length = 395

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 48/234 (20%), Positives = 85/234 (36%), Gaps = 38/234 (16%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD---TEA 133
           P+     SP+   +   P      +   C + CR+C        Q  T ++  D    E 
Sbjct: 13  PLAAEPRSPVPFHILMKP------IGPACNLACRYC-----YYPQDETSVNKMDDARLEQ 61

Query: 134 AL-AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIV 187
            +  YI  +     +I   ++ GG+PL+      +K L    RY      +   S     
Sbjct: 62  FIRRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQT 117

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V- 242
           +   IN    +  +E G  + +++  N   + +        S  + A  GI LL Q  V 
Sbjct: 118 NGTLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVD 177

Query: 243 --LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
             LL  + N+     A +    V L  + Y    P ++ G +     + EG ++
Sbjct: 178 FNLLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225


>gi|317129637|ref|YP_004095919.1| radical SAM protein [Bacillus cellulosilyticus DSM 2522]
 gi|315474585|gb|ADU31188.1| Radical SAM domain protein [Bacillus cellulosilyticus DSM 2522]
          Length = 356

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ ++   C + C  C R E         LS  + +A +  I         +FTGGD
Sbjct: 11  PFIVIWEVTRACALKCLHC-RAEAQYKSDPRELSRNEGKALIDDIASMDNPL-FVFTGGD 68

Query: 154 PLILSH 159
           PL+ S 
Sbjct: 69  PLMRSD 74


>gi|91200261|emb|CAJ73306.1| similar to moaA/nifB/ppqE/nirJ protein family for cofactor
           bionsynthesis [Candidatus Kuenenia stuttgartiensis]
          Length = 333

 Score = 41.2 bits (96), Expect = 0.24,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 9/103 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-G 152
           P RI L +   C + C++C R+     +          + A   +Q       +   G G
Sbjct: 28  PTRICLYVTDRCTLSCKWCLRQ-STQDKFSNKRHDMSVDQARKILQHFPNAARLSLAGFG 86

Query: 153 DPLILSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINP 194
           +PL++    L K+    +     V I+   + +     +RI+ 
Sbjct: 87  EPLMVDD--LFKITAEFKKRPMRVSIITNGTLLL----ERIDD 123


>gi|290769880|gb|ADD61651.1| putative protein [uncultured organism]
          Length = 502

 Score = 41.2 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 42/212 (19%)

Query: 14  LYNANLIKKEQIDEIKEISNHYSIA--LTPVIANLINPHNPNDPIARQFIPQKEELNILP 71
           L +  L ++    ++++    Y     +TP         + ND          EEL    
Sbjct: 34  LIDQGLTREAATAQLEQ---KYRDRADVTPA--------DIND-----CFDDIEELTAAG 77

Query: 72  E-EREDPIGDNN------HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           +    D   D+        + +K +         L + H C + C +CF  +     +  
Sbjct: 78  QLFAPDAYADHAFDFKNRSNVVKALC--------LHVAHTCNLNCSYCFAAQGKFHGEAG 129

Query: 125 VLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILR 179
           ++S +  + AL ++ E S      EV F GG+PL ++ +  ++++   R I  +H +  R
Sbjct: 130 LMSFETGKRALDFLIEHSGTRRNLEVDFFGGEPL-MNFEVCKQLVAYARSIEKEHNKNFR 188

Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           F       +   I  E+I    +    V +++
Sbjct: 189 F---TMTTNGIGITDEVIDWCNKECHNVVLSL 217


>gi|169832193|ref|YP_001718175.1| MiaB-like tRNA modifying protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169639037|gb|ACA60543.1| MiaB-like tRNA modifying enzyme [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 450

 Score = 41.2 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 18/126 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  +K+   C  +C +C     +       L S+  E  L   +        E++ TG
Sbjct: 151 RTRAFIKVQEGCRDFCTYC-----IVPYARGPLRSRPPERVLELARGLVDRGYSELVLTG 205

Query: 152 GDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
            +       L  + L  +++ L  I  +  LR  S    V+P  I  EL++ + E     
Sbjct: 206 VNLGAYGRDLGTENLPGLVRRLVRIPGLARLRLSS----VEPNEITRELVEAVAE---NP 258

Query: 208 YIAIHA 213
             A H 
Sbjct: 259 VCAPHF 264


>gi|154685272|ref|YP_001420433.1| YfkA [Bacillus amyloliquefaciens FZB42]
 gi|154351123|gb|ABS73202.1| YfkA [Bacillus amyloliquefaciens FZB42]
          Length = 373

 Score = 41.2 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 44/121 (36%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L     +  L  + E   +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNALP---IDLLLKRLDEIPLLRSISITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +++ +  L    H + +R           +IN  L   +    +  P    +H +
Sbjct: 90  LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIGRYERIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|284165007|ref|YP_003403286.1| radical SAM protein [Haloterrigena turkmenica DSM 5511]
 gi|284014662|gb|ADB60613.1| Radical SAM domain protein [Haloterrigena turkmenica DSM 5511]
          Length = 380

 Score = 41.2 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 36/210 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ +L   C + C  C R +   ++    L + + +  L    E      V+ +GGD
Sbjct: 12  PMVLIWELTQACGLACDHC-RADARPNRHPDELPTAEGKRLLEDAAEFGDGQLVVLSGGD 70

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--INPELIQCLKEAG-KPVYIA 210
           PL+         ++ L  I H   L    R+ I       +  + I+ + +AG K + ++
Sbjct: 71  PLVRDD------VEEL--IAHGDDL--GLRMTITPSGTGSLTADRIRAMADAGLKRMAVS 120

Query: 211 IHANHP---YEFS------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           I    P    EF       EE I A+     AG+ +   + + +        L  +    
Sbjct: 121 IDGATPESHDEFRGETGSFEETIRAVEDAKAAGLPVQVNTTVCRQ---TVGELPEIRDLL 177

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291
            E+    + +           F + I  G+
Sbjct: 178 REIGAVMWSVF----------FLVPIGRGR 197


>gi|169334037|ref|ZP_02861230.1| hypothetical protein ANASTE_00430 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258754|gb|EDS72720.1| hypothetical protein ANASTE_00430 [Anaerofustis stercorihominis DSM
           17244]
          Length = 438

 Score = 41.2 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 64/167 (38%), Gaps = 29/167 (17%)

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGI-VHR-YPDRILLKLLHVCPVYCRFCFRREM 117
            +P   E      +    + +++    +G+ VHR +  +  + ++  C  +C +C     
Sbjct: 110 SLPSLLEECDAKRKLIVEVLEDSDKLAEGLPVHRQFKHKAFVSIMKGCNNFCSYC----- 164

Query: 118 VGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGG----------DPLILSHKRLQKV 165
           +         S++ +  L+ ++      + EV   G           DP  +   +L K+
Sbjct: 165 IVPYTRGRERSREYQNILSEVRELANDGVKEVTLLGQNVNSYGKNLDDP--VPFAKLLKM 222

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           +  +  I+ V+ +  H +           ELI+ +++  K +   IH
Sbjct: 223 VSEVEGIERVRFMTSHPKDLS-------DELIEVIRDNPK-ICRHIH 261


>gi|160872066|ref|ZP_02062198.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsiella grylli]
 gi|159120865|gb|EDP46203.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsiella grylli]
          Length = 443

 Score = 41.2 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 10/111 (9%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
           R L+ ++  C  YC FC      G +    L   D  A + ++ ++  + E+   G +  
Sbjct: 149 RALVSIMEGCNKYCSFCVVPYTRGEEISRPL--DDVLAEVVHLSQQ-GVREITLLGQNVN 205

Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
                        L  +++ +  I  +  +RF +  P+    R+       
Sbjct: 206 DYQGPRFEGGTADLADLIRYIAAIDDILRIRFTTSHPLAFSDRLIQAYADI 256


>gi|78043321|ref|YP_359656.1| molybdenum cofactor biosynthesis protein MoaA [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|123576645|sp|Q3ADX8|MOAA_CARHZ RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|77995436|gb|ABB14335.1| molybdenum cofactor biosynthesis protein MoaA [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 321

 Score = 41.2 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 43/239 (17%), Positives = 92/239 (38%), Gaps = 33/239 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C          G +L+ ++    +        + +V  TGG+PL+  
Sbjct: 14  ISVTDKCNLNCFYCKPGNFQEFSPGDILTFEEILEVVRAFL-PLGLKKVRITGGEPLV-- 70

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP- 216
            K L  +++ +  +  +  L   +   +       P   + LK AG   V  ++ + +P 
Sbjct: 71  RKNLLYLIENIAALPGIDDLALTTNGILF------PRYARDLKSAGLSRVNFSLDSLNPD 124

Query: 217 --YEFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIN-DDPEILAN-LMRTFVELR- 265
                +        + AI+      +  +   +VLL+GIN D+ +   + + R  V  R 
Sbjct: 125 KFRSITGGGELKNVLEAINLALELDLTPVKINTVLLRGINLDEIDAFVDFIFRYPVHWRF 184

Query: 266 --IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ----PFYILDLPGGYG 318
             + P      D       F ++++E  +I+++  + I G       P    ++P   G
Sbjct: 185 IELMP----LNDREKWQRQF-VSVKEIVEIISAKYKLIPGKTVGGAGPARYYEVPEALG 238


>gi|29346323|ref|NP_809826.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|81445146|sp|Q8A9A2|RIMO_BACTN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|29338218|gb|AAO76020.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
           VPI-5482]
          Length = 436

 Score = 41.2 bits (96), Expect = 0.25,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 71/227 (31%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  +    S ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKSMEEILDEVRYLVSQGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G D  +   + L ++++ +  I  V+ +R H       P     +L + ++E        
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
                           +                L+ I+D+   +  LMR           
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
                         ++ E+  K++   ++++ G+  +   ++  PG 
Sbjct: 268 --------------VSKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGE 300


>gi|153009561|ref|YP_001370776.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum anthropi
           ATCC 49188]
 gi|151561449|gb|ABS14947.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum anthropi
           ATCC 49188]
          Length = 345

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 58/169 (34%), Gaps = 31/169 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +           + ++  TGG+PL+  
Sbjct: 30  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCTAFI-DKGVRKLRLTGGEPLV-- 86

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI- 211
            K +  +++ L        +  + +    S++      R   EL +C       V +   
Sbjct: 87  RKNIMHLIRQLSRHLKSGALDELTLTTNGSQL-----SRFADELAEC-GIRRINVSLDTL 140

Query: 212 -----HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
                H     + +        +  I     AGI +   +V LK  ND 
Sbjct: 141 DPEKFH-----QITRWGDLPRVLEGIEAAQRAGIRVKINAVALKDFNDH 184


>gi|321312027|ref|YP_004204314.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           BSn5]
 gi|320018301|gb|ADV93287.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis
           BSn5]
          Length = 451

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     +L S+D E  +   Q+   +   E++ T 
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196

Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   +      K+L  L   ++ V+ +R  S    ++  +I  ++I+ L  +
Sbjct: 197 IHTGGYGED---MKDYNFAKLLSELDTRVEGVKRIRISS----IEASQITDKVIEVLDRS 249

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 250 DK-IVNHLHI 258


>gi|307946521|ref|ZP_07661856.1| putative radical SAM domain protein [Roseibium sp. TrichSKD4]
 gi|307770185|gb|EFO29411.1| putative radical SAM domain protein [Roseibium sp. TrichSKD4]
          Length = 472

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 40/235 (17%), Positives = 90/235 (38%), Gaps = 34/235 (14%)

Query: 57  ARQFIPQKEELNI-LPEEREDPIGDNN---HSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112
             Q +P + E    +     D +  +N    + +        + ++L +  +C + C +C
Sbjct: 36  FLQNLPGEREYQAGIQAFFSDFLASHNAPSTNDVSWPTENKIEDLVLNISQICNLACSYC 95

Query: 113 FRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           +  ++  +  G ++S    + AL   Y    + +  + F GG+P  L+ + ++  ++   
Sbjct: 96  YADDL--NSAGKIMSKSVCQEALDRAYQMSDTGLKSLKFLGGEP-TLAFEEIKYAVEYAE 152

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI------ 224
            I   +  R  S V + +  +IN E+ Q    A K  Y+ +  + P              
Sbjct: 153 TICAAEGYRLPSFVIVTNGTKINAEMAQFF--ASKNFYVLVSMDGPQSIHNLLRPFTGGR 210

Query: 225 -------AAISRLANAGI-----ILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
                   AI  L    +      + +Q+    G++     +  L+  F+E+ I+
Sbjct: 211 GSYSKALDAIVELKKKNVEVAIEAVYTQTHYKNGVS-----IRCLLDHFLEIGIR 260


>gi|288553679|ref|YP_003425614.1| hypothetical protein BpOF4_03280 [Bacillus pseudofirmus OF4]
 gi|288544839|gb|ADC48722.1| hypothetical protein BpOF4_03280 [Bacillus pseudofirmus OF4]
          Length = 370

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 8/74 (10%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
            + C  YCRFC      G  +G VL   D E     IQE   +   E++  GG       
Sbjct: 61  TNFCDTYCRFCAFYRKPGHSEGYVL---DNERIFEKIQETIDVGGTEILMQGG---TNPD 114

Query: 160 KRLQKVLKTLRYIK 173
            +L      LR IK
Sbjct: 115 LKLDYYTNLLREIK 128


>gi|284923527|emb|CBG36622.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli 042]
          Length = 445

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMLNQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|256378891|ref|YP_003102551.1| Coproporphyrinogen dehydrogenase [Actinosynnema mirum DSM 43827]
 gi|255923194|gb|ACU38705.1| Coproporphyrinogen dehydrogenase [Actinosynnema mirum DSM 43827]
          Length = 460

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 48/183 (26%)

Query: 71  PEEREDPIGDNNHSPLKGIVHR----YPDRILLKLLHVCPVYCRFCF--------RREMV 118
           P +   P+     + + G+V R    +PD  L   +  C   CRFC         R +  
Sbjct: 38  PRQSYRPLPPGPDADVPGLVSRSLARFPDLNLYAHVPFCRQICRFCNLYAVADAGRDDRH 97

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
                 VLS  +  AA   + ++  +  +   GG P +L  + L++++  L         
Sbjct: 98  DDYVTAVLSEAERLAA---LTDRKHVTTLYLGGGTPSLLRPQLLERLVTGLLA------- 147

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA--IAAISRLANAGII 236
                +   DP    PE                      E        AA+  +  AGI 
Sbjct: 148 -----LFATDPATPPPE-------------------TALEVDPATVDAAALRDIRAAGIN 183

Query: 237 LLS 239
            ++
Sbjct: 184 RIN 186


>gi|167837373|ref|ZP_02464256.1| molybdenum cofactor biosynthesis protein A [Burkholderia
           thailandensis MSMB43]
          Length = 370

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R + G          +L+ ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K ++ +++ L  +
Sbjct: 100 PLL--RKNIEFLIERLAKM 116


>gi|22255838|gb|AAM94763.1| CalE1 [Micromonospora echinospora]
          Length = 441

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 52/163 (31%), Gaps = 29/163 (17%)

Query: 98  LLKLLHVCPVYCRFC---FRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGG 152
           L   +  C + C FC    R      Q    L    +  E     +   +      F GG
Sbjct: 49  LYVHVPFCEMRCGFCNLFTRANAPAEQVTGYLRQLRRQAEQVADALGADAGYARAAFGGG 108

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKEAGK- 205
            P  L+   L ++         +      +R+P V       P    P+ +  L   G  
Sbjct: 109 TPTYLTADELAELFD-------IATTTTGARLPGVPLSVETSPATATPDRLAVLAAHGTT 161

Query: 206 PVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLS 239
            V I +          A  P   + E  AA+  + +A I +L+
Sbjct: 162 RVSIGVQSFLDAEARAAGRPQRRT-EVEAALGAIRDARIPVLN 203


>gi|84496509|ref|ZP_00995363.1| molybdenum cofactor biosynthesis protein A [Janibacter sp.
           HTCC2649]
 gi|84383277|gb|EAP99158.1| molybdenum cofactor biosynthesis protein A [Janibacter sp.
           HTCC2649]
          Length = 336

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 22/180 (12%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + CR+C   E +    K  +L+  +    ++ I     + +V  TGG+PL+ 
Sbjct: 23  VSVTDRCNLRCRYCMPAEGLPWLAKPEMLTDDELIRLVS-IFVALGVEQVRLTGGEPLL- 80

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
             + L  ++  +  +     +   +             L   L  AG   V I++    P
Sbjct: 81  -RRSLTDLVGRIAALTPRPRIAMTTNGIG------LDRLAGPLAAAGLDRVNISLDTVDP 133

Query: 217 YEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD--PEILANLMRTFVELR 265
            EF++           A +     AG + +   +V ++GIND    ++LA  +    ELR
Sbjct: 134 KEFADLTRRDRLKDVEAGLEAAREAGLVPVKVNAVAMRGINDHSVADLLAWCLERGYELR 193


>gi|310658531|ref|YP_003936252.1| isopentenyl-adenosine a37 tRNA methylthiolase [Clostridium
           sticklandii DSM 519]
 gi|308825309|emb|CBH21347.1| isopentenyl-adenosine A37 tRNA methylthiolase [Clostridium
           sticklandii]
          Length = 477

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/137 (16%), Positives = 57/137 (41%), Gaps = 18/137 (13%)

Query: 78  IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           + D + + ++G+    RY  +  + +++ C  +C +C     +         S++ E  +
Sbjct: 166 VWDIDGNVIEGLPSARRYDLKAFVNIMYGCNNFCTYC-----IVPYTRGRERSRNPEDVI 220

Query: 136 AYIQ--EKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVD 188
             ++   ++ + E+   G +     +         K+L  L  I+ ++ +RF +      
Sbjct: 221 NEVKDLARNGVKEITLLGQNVNSYGNDFDNKVSFAKLLTMLNDIQGIERIRFMTSH---- 276

Query: 189 PQRINPELIQCLKEAGK 205
           P+ I+ ELI  +    K
Sbjct: 277 PKDISEELIDAVANLDK 293


>gi|193213382|ref|YP_001999335.1| MiaB-like tRNA modifying enzyme [Chlorobaculum parvum NCIB 8327]
 gi|193086859|gb|ACF12135.1| MiaB-like tRNA modifying enzyme [Chlorobaculum parvum NCIB 8327]
          Length = 456

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 21/126 (16%)

Query: 94  PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  LK+   C   C +C     R         TV+      A   Y        E++ 
Sbjct: 154 RTRAFLKIQDGCSFGCAYCAIPLARGRSRSVPLATVMERAAAIAEAGY-------REIVL 206

Query: 150 TGGDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           TG +       +     +L+ L  +  V  +R  S    ++PQ ++ ELI+ +  + K  
Sbjct: 207 TGINIADYHDGQHGFTDLLRHLEELD-VSRIRISS----IEPQFLDDELIELVAGSTK-- 259

Query: 208 YIAIHA 213
            I  H 
Sbjct: 260 -IMPHF 264


>gi|197117199|ref|YP_002137626.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197086559|gb|ACH37830.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
          Length = 507

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 16/108 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L   + C   C +C  +     +  T+L +K  +  +    +   I +V  +GGDPL   
Sbjct: 144 LMFSNECETNCSYCQAQRRYLPEN-TLLPAKRWKEIIGE-AKSLGIEQVTLSGGDPLYRK 201

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--INPELIQCLKEAG 204
                   + L  I  +        +    P +  I  E+ + L E G
Sbjct: 202 --------EALALIGEL----IAKDMLFQLPTKCCITEEIAERLVEVG 237


>gi|300940154|ref|ZP_07154761.1| radical SAM domain protein [Escherichia coli MS 21-1]
 gi|300455015|gb|EFK18508.1| radical SAM domain protein [Escherichia coli MS 21-1]
          Length = 445

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMLNQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEREADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|291548154|emb|CBL21262.1| RNA modification enzyme, MiaB family [Ruminococcus sp. SR1/5]
          Length = 375

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 51/130 (39%), Gaps = 27/130 (20%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD 153
           R  +K+   C  +C +C     +       + S++ E+ L  ++  ++    EV+ TG  
Sbjct: 79  RAYIKVQDGCNQFCTYC-----IIPYARGRVRSRNIESVLKEVRALAEKGYKEVVLTGI- 132

Query: 154 PLILSH----------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
              LS           + L  +++ +  I+ ++ +R  S    ++P  +  E  + +   
Sbjct: 133 --HLSSYGVDFPEEKKETLLSLIRAVHEIEGIRRIRLGS----LEPGIVTREFAEGIAAL 186

Query: 204 GKPVYIAIHA 213
            K   +  H 
Sbjct: 187 PK---VCPHF 193


>gi|197303019|ref|ZP_03168067.1| hypothetical protein RUMLAC_01746 [Ruminococcus lactaris ATCC
           29176]
 gi|197297874|gb|EDY32426.1| hypothetical protein RUMLAC_01746 [Ruminococcus lactaris ATCC
           29176]
          Length = 440

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 16/146 (10%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEA 133
           P+ +       G    Y     LK+   C  +C +C   ++ G+ +   +     +  E 
Sbjct: 131 PLPETKRLVTTGGHFAY-----LKIAEGCDKHCTYCIIPKVRGNYRSVPMERLVNEAREL 185

Query: 134 ALAYIQEKSQI-WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
           A   ++E   +  E    G D  +   K L K++K L  I  ++ +R         P+ I
Sbjct: 186 AEQGVKELILVAQETTLYGKD--LYGEKSLHKLVKELCNISGIRWIRI----LYCYPEEI 239

Query: 193 NPELIQCLKEAGKPV-YIAIHANHPY 217
             ELIQ +KE  K   Y+ +   H  
Sbjct: 240 TDELIQVMKEEPKVCHYLDLPIQHAN 265


>gi|52425076|ref|YP_088213.1| molybdenum cofactor biosynthesis protein A [Mannheimia
           succiniciproducens MBEL55E]
 gi|81609553|sp|Q65TT2|MOAA_MANSM RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|52307128|gb|AAU37628.1| MoaA protein [Mannheimia succiniciproducens MBEL55E]
          Length = 337

 Score = 41.2 bits (96), Expect = 0.26,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 62/161 (38%), Gaps = 18/161 (11%)

Query: 99  LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +  VC   C +C         QK + LS  +    +          +V  TGG+P  L
Sbjct: 27  LSVTDVCNFKCTYCLPSGYQPPVQKESFLSLDEIRRIVGAFAAMGT-EKVRLTGGEP-TL 84

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
               L  +++T+  ++ ++ +         +  R+  ++ +  K     + +++ +  P 
Sbjct: 85  RKDFLA-IVETISALEGIKKV-----ALTTNGYRMEKDVERWKKAGVSSINVSVDSLDPR 138

Query: 218 E---FSEE-----AIAAISRLANAGII-LLSQSVLLKGIND 249
           +    + E      +  I R    G   +   SVL+K +ND
Sbjct: 139 QFYSITGENKFHQVMKGIERAFEIGYEKIKVNSVLMKNLND 179


>gi|91201046|emb|CAJ74104.1| similar to moaA/nirJ/ppqE family of cofactor synthesis proteins
           [Candidatus Kuenenia stuttgartiensis]
          Length = 350

 Score = 41.2 bits (96), Expect = 0.27,   Method: Composition-based stats.
 Identities = 42/222 (18%), Positives = 81/222 (36%), Gaps = 44/222 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L+    C + C +C+     G      LS ++ ++ +   +       ++  GG+PL+  
Sbjct: 32  LEFTKKCNLRCLYCYSSA--GFAAENELSLEEMKSVVDQAKGLGAKKIILLGGGEPLLY- 88

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
            + +  ++K +  I  +Q + F +   +     I+ E+ Q L      V + I  N    
Sbjct: 89  -EGVVDIIKYINSIG-LQQILF-TNGVL-----IDKEIAQTL--YRNKVSVVIKYN---S 135

Query: 219 FSEEAIAAISR--------------LANAGII-----LLSQSVLLK-GINDDPEILANLM 258
           F+ E    ++               L  +G       L  QSV+ K  IN+ PE+   + 
Sbjct: 136 FNPEVQDMLANAKGTYKQITRGLKILMESGYPREDLGLGIQSVICKQNINEIPEMW--MW 193

Query: 259 RTFVELRIKPY---YLHHPDLAAGTSHFRLTIEEGQKIVASL 297
               +  I PY     +    A       +   E ++I   L
Sbjct: 194 AR--KRNIIPYFEILTYQGR-ARENKDLIVPTLEIKEIFKRL 232


>gi|332827121|gb|EGJ99906.1| ribosomal protein S12 methylthiotransferase rimO [Dysgonomonas
           gadei ATCC BAA-286]
          Length = 431

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 37/229 (16%), Positives = 69/229 (30%), Gaps = 53/229 (23%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    M G  +   +  ++ E  + ++             ++ + 
Sbjct: 138 AYLKISEGCNRACSYCSIPIMTGKHQSRQI--EEVEEEVRHLVASGVKEFQVIAQDLSYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ------RINPELI------- 197
           G D       +L +++  +  I+ V+ +R H   P   P       R N  +        
Sbjct: 196 GLD--NYKQAKLPELIDRIAKIEGVEWIRLHYAYPANFPYDLLPVMRNNENVCKYLDIAL 253

Query: 198 -----QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
                  LK+  + +      N      EE           GI +   + L+ G    P 
Sbjct: 254 QHISDNMLKKMRRNITKEQTYNLIKRIREEV---------PGIHIR--TTLMVG---HPG 299

Query: 253 ILANLMRTFV---------ELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
                    +          +   PY   H D     +H+R  I +  K
Sbjct: 300 ESHKDFEELLQFVKDVRFDRMGAFPY--SHEDGTYAYAHYRDEISDAVK 346


>gi|291550943|emb|CBL27205.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus
           torques L2-14]
          Length = 440

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 16/146 (10%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           P+ +       G    Y     LK+   C  +C +C     +     +V   +  + A  
Sbjct: 131 PLPETKRLVTTGGHFAY-----LKIAEGCDKHCTYCII-PKIRGNFRSVPMERLLKEAQD 184

Query: 137 YIQEKSQIWEVIFTGGDPLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
            + E+     ++      L        K L K+L+ L  I  ++ +R         P+ I
Sbjct: 185 -LAEQGVKELILVAQETTLYGKDLYGEKSLPKLLRELCKISGIRWIRI----LYCYPEEI 239

Query: 193 NPELIQCLKEAGKPV-YIAIHANHPY 217
             ELIQ +KE  K   Y+ +   H  
Sbjct: 240 TDELIQVMKEESKICHYLDLPIQHAN 265


>gi|253577928|ref|ZP_04855200.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251850246|gb|EES78204.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 485

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 63/145 (43%), Gaps = 21/145 (14%)

Query: 78  IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           +   +   ++G+    +Y  +  + ++  C  +C +C     +         S++ EA +
Sbjct: 175 VWKESDEIVEGMPSDRKYSFKTGVNIMFGCNNFCSYC-----IVPYVRGREKSREPEAII 229

Query: 136 AYIQE--KSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIV 187
             I+      + EV+  G + +    K L+       +LK +  I+ ++ +RF +     
Sbjct: 230 EEIKGLVADGVTEVMLLGQN-VNSYGKTLEHPVTFAQLLKQVEAIEGLKRIRFMTSH--- 285

Query: 188 DPQRINPELIQCLKEAGKPVYIAIH 212
            P+ ++ ELI+ + E+ K V   +H
Sbjct: 286 -PKDLSDELIRTMAES-KKVCHHLH 308


>gi|171185411|ref|YP_001794330.1| radical SAM domain-containing protein [Thermoproteus neutrophilus
           V24Sta]
 gi|170934623|gb|ACB39884.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta]
          Length = 216

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +   L  CP+ CR+C  +       G  L   D E  +        +  V+ TGG+PLI
Sbjct: 23  AVFIRLAGCPIRCRYCDTKYSWDPLGGEEL---DAEEVVRRAAAHGPLGHVVITGGEPLI 79

Query: 157 LSHKRLQKVLKTLRYIKHVQI 177
              + L ++   LR +  V++
Sbjct: 80  --WRNLHELACPLRRLGTVEV 98


>gi|158422523|ref|YP_001523815.1| molybdenum cofactor biosynthesis protein A [Azorhizobium
           caulinodans ORS 571]
 gi|158329412|dbj|BAF86897.1| molybdenum cofactor biosynthesis protein A [Azorhizobium
           caulinodans ORS 571]
          Length = 399

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 58/172 (33%), Gaps = 41/172 (23%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +    +  + ++  TGG+PL+  
Sbjct: 84  VSVTDRCDFRCVYCMSEHMTFLPKPDLLTLEELDRLCSAFVAR-GVRKLRLTGGEPLVRR 142

Query: 159 H-KRLQKVLKTLRYIKHVQILRF--------HSRVPIVDPQRINPELIQCLKEAGKPVYI 209
               L + L       H++  R          S++      R   +L  C  +    V I
Sbjct: 143 DVMTLFRSLSR-----HLETGRLEELTLTTNGSQL-----ARFAGDLAACGVK-RINVSI 191

Query: 210 AIHANHPYEFSEEAIAAISRL-------------ANAGIILLSQSVLLKGIN 248
                       +   AI+R                AGI +   +V LK +N
Sbjct: 192 DT-------LDPDKFRAITRWGDLAKVLEGVKAAQRAGIHVKLNAVALKDVN 236


>gi|116748163|ref|YP_844850.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans
           MPOB]
 gi|116697227|gb|ABK16415.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB]
          Length = 292

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 14/120 (11%)

Query: 95  DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKD---TEAALAYIQEKSQ-IWEVIF 149
           D +LL++   C    C FC      G+ KG     KD    +A + Y       +  V  
Sbjct: 18  DSVLLQVTVGCSHNKCTFC------GTYKGERFRIKDDATIDADIRYAAGNLSFLHRVFL 71

Query: 150 TGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
             GD LI+   RL ++++ +R  +  ++ +  +     +   R  PE +  L+E G  + 
Sbjct: 72  VDGDALIIPQDRLVRIMRRIREEMPWIRRVGLYGNAKSIL--RKTPEQLAELRELGLGIV 129


>gi|300691998|ref|YP_003752993.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
           PSI07]
 gi|299079058|emb|CBJ51720.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
           PSI07]
          Length = 387

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 16/90 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +++            +LS ++ E       E   + ++  TGG+
Sbjct: 62  ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERIARLFIEH-GVEKIRLTGGE 120

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSR 183
           PL+     ++++++ L         R H+R
Sbjct: 121 PLLRKD--IERLVEMLA--------RLHTR 140


>gi|224538617|ref|ZP_03679156.1| hypothetical protein BACCELL_03511 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519751|gb|EEF88856.1| hypothetical protein BACCELL_03511 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 498

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 82/226 (36%), Gaps = 41/226 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDPLI 156
           L L + C  +CR+C         +  V +   T   L  I+E ++  + ++   GG+  +
Sbjct: 146 LMLTNRCMAHCRYC-----YADTRTQVQNWLPTSRILELIREAAELPVQQINLIGGEIFL 200

Query: 157 LSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
                   +L  L  ++H ++     +++P         E ++ LK+      I +  + 
Sbjct: 201 HKD--WDIILAEL--VRHGIEPEFISTKIP------FTEECLRKLKQTHYKNLIQVSLDA 250

Query: 216 ------PYEFSEEAIAAISRLANAGIILLSQ--------SVLLKGINDDPEILANLMR-- 259
                     S ++  A   +   G+ +L Q        SVL    N DP  L +L R  
Sbjct: 251 IDTTVLVQSLSVDSSYASEMMR--GLRMLDQSGLPYQVSSVLTTY-NCDPRTLTDLFRFL 307

Query: 260 ----TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301
                  + R+ P          G +  + + ++   I   L+E +
Sbjct: 308 STLKNLHDWRLTPVSNSTTTKYPGFADLKPSHQKISDIFRFLQEAV 353


>gi|239627763|ref|ZP_04670794.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239517909|gb|EEQ57775.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 460

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 29/167 (17%)

Query: 64  KEELNILPEEREDPIGDNNHSP--LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121
           ++E         D  G + + P  +  I      R  +K+   C  +C +C      G  
Sbjct: 119 EDEGPKSGIHVLDIGGTDEYEPLHVDNIED--HTRAFIKVQDGCNQFCSYCIIPYARGRV 176

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTG------------GDPLILSH---KRLQKVL 166
           +      +D EA +  +  +    EV+ TG            G P+   +     L  ++
Sbjct: 177 RSR--KPEDVEAEVEGLVAR-GYKEVVLTGIHLSSYGMEHREGGPVQGGNWDHGPLLDLI 233

Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
             +  I  ++ +R  S    ++P+ I  E  + L    K      H 
Sbjct: 234 GRIHRIPGLERIRLGS----LEPRIITEEFAEALAGLAK---FCPHF 273


>gi|170754856|ref|YP_001781949.1| RNA modification protein [Clostridium botulinum B1 str. Okra]
 gi|238065365|sp|B1II37|RIMO_CLOBK RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|169120068|gb|ACA43904.1| RNA modification enzyme, MiaB family [Clostridium botulinum B1 str.
           Okra]
          Length = 445

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%)

Query: 91  HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           H+Y D       RIL    +         C  +C +C    + G  +      ++    +
Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184

Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
             + ++  + E+I    D  +        K L ++L+ +  ++ V+ +R         P+
Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239

Query: 191 RINPELIQCLKEAGK 205
            I  ELI+ +K   K
Sbjct: 240 EITKELIEEIKNNDK 254


>gi|168180715|ref|ZP_02615379.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
           2916]
 gi|226949759|ref|YP_002804850.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
           Kyoto]
 gi|182668451|gb|EDT80430.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC
           2916]
 gi|226843731|gb|ACO86397.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str.
           Kyoto]
          Length = 445

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%)

Query: 91  HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           H+Y D       RIL    +         C  +C +C    + G  +      ++    +
Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184

Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
             + ++  + E+I    D  +        K L ++L+ +  ++ V+ +R         P+
Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239

Query: 191 RINPELIQCLKEAGK 205
            I  ELI+ +K   K
Sbjct: 240 EITKELIEEIKNNDK 254


>gi|167764860|ref|ZP_02436981.1| hypothetical protein BACSTE_03252 [Bacteroides stercoris ATCC
           43183]
 gi|167697529|gb|EDS14108.1| hypothetical protein BACSTE_03252 [Bacteroides stercoris ATCC
           43183]
          Length = 440

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 65/174 (37%), Gaps = 21/174 (12%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYP-------DRILLKLLHVCPVYCRFCFRREMVG 119
           L  L + R+   G+ + S LK I    P        R  LK+   C  YC +C       
Sbjct: 114 LQYLGDLRKHESGEAHTSALKDIRSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTI-PFAR 172

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQ 176
            +      +   E A           E++ TG   GD    + +    ++K L  ++ ++
Sbjct: 173 GRSRNGSIASLVEQARQ--AAAEGGKEIVLTGVNIGDFGKSTGETFFDLVKALDDVECIE 230

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
             R  S    ++P  +  E+I+ +  + +      H + P    S+E +  + R
Sbjct: 231 RYRISS----IEPNLLTDEIIEFVSRSKR---FMPHFHIPLQSGSDEVLKLMRR 277


>gi|153940621|ref|YP_001391704.1| RNA modification protein [Clostridium botulinum F str. Langeland]
 gi|238065366|sp|A7GFZ4|RIMO_CLOBL RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|152936517|gb|ABS42015.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
           Langeland]
 gi|295319732|gb|ADG00110.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str.
           230613]
          Length = 445

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%)

Query: 91  HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           H+Y D       RIL    +         C  +C +C    + G  +      ++    +
Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184

Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
             + ++  + E+I    D  +        K L ++L+ +  ++ V+ +R         P+
Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239

Query: 191 RINPELIQCLKEAGK 205
            I  ELI+ +K   K
Sbjct: 240 EITKELIEEIKNNDK 254


>gi|148380361|ref|YP_001254902.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
           ATCC 3502]
 gi|153932059|ref|YP_001384581.1| RNA modification protein [Clostridium botulinum A str. ATCC 19397]
 gi|153935820|ref|YP_001388097.1| RNA modification protein [Clostridium botulinum A str. Hall]
 gi|238065360|sp|A7FVY1|RIMO_CLOB1 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|238065364|sp|A5I4I1|RIMO_CLOBH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|148289845|emb|CAL83953.1| radical SAM superfamily protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152928103|gb|ABS33603.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
           ATCC 19397]
 gi|152931734|gb|ABS37233.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str.
           Hall]
          Length = 445

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%)

Query: 91  HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           H+Y D       RIL    +         C  +C +C    + G  +      ++    +
Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184

Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
             + ++  + E+I    D  +        K L ++L+ +  ++ V+ +R         P+
Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239

Query: 191 RINPELIQCLKEAGK 205
            I  ELI+ +K   K
Sbjct: 240 EITKELIEEIKNNDK 254


>gi|117924796|ref|YP_865413.1| GTP cyclohydrolase subunit MoaA [Magnetococcus sp. MC-1]
 gi|167011814|sp|A0L7R4|MOAA_MAGSM RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|117608552|gb|ABK44007.1| GTP cyclohydrolase subunit MoaA [Magnetococcus sp. MC-1]
          Length = 326

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 59/168 (35%), Gaps = 30/168 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C   E     +   LS  +    LA   +   I     TGG+PL+  
Sbjct: 16  VSVSEQCNMRCNYCRVPEQESQLREQWLSFAELSRLLARFAQ-LGIGRFRLTGGEPLVRK 74

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPY 217
              L +++  L  +  V+ +   +         + P   + LKEAG   V I++      
Sbjct: 75  D--LAQLVAGLHQLAGVEEISLSTNGL------LLPRFAKALKEAGIARVNISL-----D 121

Query: 218 EFSE--------------EAIAAISRLANAGI-ILLSQSVLLKGINDD 250
                             E  A I     AG+  +    V++ G+ND 
Sbjct: 122 SLDPSGFQKICGDVGSPDEVKAGILAALEAGLTPVKVNMVVMGGVNDH 169


>gi|291519768|emb|CBK74989.1| Organic radical activating enzymes [Butyrivibrio fibrisolvens 16/4]
          Length = 222

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 7/82 (8%)

Query: 97  ILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
            +   L  C + C +C  R           ++  +    L Y++    +  V  TGG+PL
Sbjct: 24  AVFIRLRGCNLACSYCDTRWACSYEAPAEQMTEVEI---LDYVKST-GVNRVTLTGGEPL 79

Query: 156 ILSHKRLQKVLKTLRYIKHVQI 177
               + ++ +L+      ++++
Sbjct: 80  --KARDIKDLLRAFAAEPNIKV 99


>gi|291459240|ref|ZP_06598630.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291418494|gb|EFE92213.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 479

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 56/127 (44%), Gaps = 12/127 (9%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           + +   R  + + + C  +C +C     V  ++ +  S +        +++   + E++ 
Sbjct: 185 LRKTDFRASVNISYGCNNFCTYCI-VPYVRGREKSRSSEEILRECRDLVRD--GVKEIML 241

Query: 150 TGGDP--LILSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            G +     L  + L+  ++L+ +  I  ++ +RF +  P  +P+  + ELI  + E  +
Sbjct: 242 LGQNVNSYGLDREELRFPELLRRVSEIPGLRRIRFMT--P--NPKDFSEELIDLIGE-RE 296

Query: 206 PVYIAIH 212
            +   IH
Sbjct: 297 NICRHIH 303


>gi|167754725|ref|ZP_02426852.1| hypothetical protein CLORAM_00229 [Clostridium ramosum DSM 1402]
 gi|167705557|gb|EDS20136.1| hypothetical protein CLORAM_00229 [Clostridium ramosum DSM 1402]
          Length = 382

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 9/134 (6%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           YP  +   + + C + C  C      G+     ++  D +  L+      ++  V   GG
Sbjct: 49  YPKTLQFPITNKCNLDCIMCNIH---GNDIKNEMNIDDIKRVLSN-SIFCKVESVGINGG 104

Query: 153 DPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           +P IL      ++ +L TL  ++++ I+   + +P   P +I  E+    K+      ++
Sbjct: 105 EPFILKDITSIIETILDTLPALRNLYIISNGT-IPN-CPDKI-KEIYNLCKKHNVKFTLS 161

Query: 211 IHANHPYEFSEEAI 224
              +   E   E  
Sbjct: 162 FSIDGFDEMHNEMR 175


>gi|113968874|ref|YP_732667.1| radical SAM domain-containing protein [Shewanella sp. MR-4]
 gi|114048989|ref|YP_739539.1| radical SAM domain-containing protein [Shewanella sp. MR-7]
 gi|113883558|gb|ABI37610.1| Radical SAM domain protein [Shewanella sp. MR-4]
 gi|113890431|gb|ABI44482.1| Radical SAM domain protein [Shewanella sp. MR-7]
          Length = 295

 Score = 40.9 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 66/165 (40%), Gaps = 31/165 (18%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKS-QIWEVIFTGG 152
           ++L++ + C    C FC   +M    +    + K    E  +  I +    +  V    G
Sbjct: 19  LILQVTNGCSWNQCSFC---DMYTQPQKAFRAQKLDKIEQDILAIAKTGMPVSRVFLADG 75

Query: 153 DPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKPV 207
           D + L   RL+ + + + R++  V      +R+     P+ +    PE +  L+E G  +
Sbjct: 76  DAMSLPFARLEAICELINRHLPQV------TRISSYCLPRNLNNKTPEQLARLRELGLSL 129

Query: 208 YIAIHANHPYEF---------SEEAIAAISRLANAG----IILLS 239
                 +   E           E ++AA+ ++  AG    +++L+
Sbjct: 130 LYVGCESGDDEVLAKIKKGETFESSLAALQKIRAAGMKSSVMILN 174


>gi|302389477|ref|YP_003825298.1| RNA modification enzyme, MiaB family [Thermosediminibacter oceani
           DSM 16646]
 gi|302200105|gb|ADL07675.1| RNA modification enzyme, MiaB family [Thermosediminibacter oceani
           DSM 16646]
          Length = 441

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 8/115 (6%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           E ED +   N   +    HR   R  LK+   C ++C +C    + G  +   L  +   
Sbjct: 128 EVEDIMQTRNFEEIAFRGHRQRTRAFLKIQEGCNMFCSYCIIPYVRGPVRSRTL--ESII 185

Query: 133 AALAYIQEKSQIWEVIFTGGD-PLILSH----KRLQKVLKTLRYIKHVQILRFHS 182
                +       E++ TG    L  +       L  V++ L  I+ ++ +R  S
Sbjct: 186 REAENLAGD-GFKEIVLTGIHLGLYGADFKGGPTLYDVIERLSRIEGIKRIRLSS 239


>gi|238893550|ref|YP_002918284.1| putative iron-sulfur modifier protein [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238545866|dbj|BAH62217.1| putative iron-sulfur modifier protein [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 395

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 83/232 (35%), Gaps = 34/232 (14%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135
           P+     SP+   +   P      +   C + CR+C+       +     +     E  +
Sbjct: 13  PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDETPVNKMDDARLEQFI 63

Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189
             YI  +     +I   ++ GG+PL+      +K L    RY      +   S     + 
Sbjct: 64  RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119

Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242
             IN    +  +E G  + +++  N   + +        S  + A  GI LL Q  V   
Sbjct: 120 TLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVDFN 179

Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           LL  + N+     A +    V L  + Y    P ++ G +     + EG ++
Sbjct: 180 LLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225


>gi|257068045|ref|YP_003154300.1| GTP cyclohydrolase subunit MoaA [Brachybacterium faecium DSM 4810]
 gi|256558863|gb|ACU84710.1| GTP cyclohydrolase subunit MoaA [Brachybacterium faecium DSM 4810]
          Length = 366

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 41/235 (17%), Positives = 76/235 (32%), Gaps = 51/235 (21%)

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRREM 117
           +P     +    E  D   +   +P   +  R+        L L   C + C +C     
Sbjct: 10  MPTPRRTDETATELPDTS-ERPDTPA--LADRFGREATDLRLSLTDFCNLRCTYCM---- 62

Query: 118 VGSQKGTVLSSKDT---EAALAYIQ---EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
             +   T L  K     +  +  ++   E+  I +V FTGG+PL      L++++  +  
Sbjct: 63  -PASGLTFLGKKQLLSVDEVVRLVRIGVERLGIEQVRFTGGEPLTRPD--LEEIIAGVAS 119

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
           +     +   +                 L+ AG                        RL+
Sbjct: 120 LDPRPDISLTTNAIG------LDHRAARLRAAGLDRINV-------SLDSVVSETFERLS 166

Query: 232 N--------AGI---------ILLSQSVLLKGINDD--PEILANLMRTFVELRIK 267
                    AGI          +   +VLL G+ND   P++L   +   ++LR+ 
Sbjct: 167 RRPLLHRVLAGIDGARAAGLDPIKVNAVLLPGVNDQELPDLLDWCLERELQLRVI 221


>gi|83310894|ref|YP_421158.1| arylsulfatase regulator [Magnetospirillum magneticum AMB-1]
 gi|82945735|dbj|BAE50599.1| Arylsulfatase regulator [Magnetospirillum magneticum AMB-1]
          Length = 459

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 27/140 (19%)

Query: 43  IANLINPHNPNDPIARQFIPQKEELNILPEE----------REDPIGDNNHSPLKGIVHR 92
              LI+  N    + R     K+E+  + +           RED   + +        H 
Sbjct: 26  YTALIDADNAFWALVR-----KDEMERVLDNGALERDWRAKREDFAREMDMLRF----HL 76

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEK-SQIWE- 146
            P  +       C + C +C+       + G  +S      A+     Y      +  + 
Sbjct: 77  KPSAVYFNPTERCNLDCSYCYI-PQTMRRSGEHMSRDRLMEAMARLDEYFSRTMPEGRKP 135

Query: 147 -VIFTGGDPLILSHKRLQKV 165
            +IF G +PL+      + +
Sbjct: 136 QIIFHGAEPLLNRDAMFEAI 155


>gi|150019250|ref|YP_001311504.1| thiamine biosynthesis protein ThiH [Clostridium beijerinckii NCIMB
           8052]
 gi|149905715|gb|ABR36548.1| biotin and thiamin synthesis associated [Clostridium beijerinckii
           NCIMB 8052]
          Length = 472

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 75/210 (35%), Gaps = 32/210 (15%)

Query: 90  VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
              Y +RI+    L L + C   C +C             L+ ++ +  +  +Q+     
Sbjct: 77  QRFYGNRIVMFAPLYLSNYCVNGCTYCPYHHKNKHITRKKLTQEEIKNEVIALQDMGHKR 136

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPELIQCLK 201
             + TG DP+    + + + ++T+  IKH    ++ +        V+      E  + LK
Sbjct: 137 LALETGEDPVNNPLEYVLESIETIYSIKHKNGAIRRV-------NVNIAATTVENYRKLK 189

Query: 202 EAGKPVYIAI----HANHPYEFSEEA--------IAAISRLANAGIILLSQSVLLKGIN- 248
           +AG   YI      H     E               A+ R   AGI  +   V L G+N 
Sbjct: 190 DAGIGTYILFQETYHKKTYEELHPTGPKHDYAYHTEAMDRAMEAGIDDVGLGV-LYGLNM 248

Query: 249 ---DDPEILANLMRTFVELRIKPYYLHHPD 275
              D   +L +       + + P+ +  P 
Sbjct: 249 YRYDFVGLLMHAEHLEAAMGVGPHTISVPR 278


>gi|257094383|ref|YP_003168024.1| molybdenum cofactor biosynthesis protein A [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046907|gb|ACV36095.1| molybdenum cofactor biosynthesis protein A [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 359

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 37/191 (19%)

Query: 85  PLKGIVHRYPDRIL------------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           P+  +  R+P   L            L +   C   C +C   EM    +  VL+ ++  
Sbjct: 21  PISPVTSRHPKGALVDKFGRHVTYIRLSITDRCDFRCSYCMAEEMTFLPRAQVLTLEECL 80

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP 189
                      + +V  TGG+PL+  +     +L+ +  +  ++ L      S++     
Sbjct: 81  RIAGTF-VDLGVTKVRVTGGEPLVRHNAI--WLLERIAGLSGLKELVITTNGSQL----- 132

Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHP---YEFS-----EEAIAAISRLANAGI-ILLS 239
                     L+ AG + + +++         E +      + +  +     AG   L  
Sbjct: 133 ----DRFAAALRAAGVRRINVSLDTLRSQRFREITRVGDLAKVLRGLDAAQAAGFERLKL 188

Query: 240 QSVLLKGINDD 250
            +V+++G+NDD
Sbjct: 189 NTVMMRGVNDD 199


>gi|220933522|ref|YP_002512421.1| GTP cyclohydrolase subunit MoaA [Thioalkalivibrio sp. HL-EbGR7]
 gi|219994832|gb|ACL71434.1| GTP cyclohydrolase subunit MoaA [Thioalkalivibrio sp. HL-EbGR7]
          Length = 327

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 35/176 (19%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFT 150
           R+ + + L +   C + C +C  +     ++    LS  +    +    +   +  V  T
Sbjct: 10  RHIEYVRLSVTDQCDLRCFYCMPKGFKDFEEPEHWLSFDEIARVMGAFGQ-LGVQRVRIT 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAGKPV 207
           GG+PL+     +  ++  L  +  +  +      +R+          +  Q LK+AG   
Sbjct: 69  GGEPLVRKD--IPDLVSRLAALPGINDISLSTNATRM---------AKHAQALKDAG--- 114

Query: 208 YIAIHAN-HPYEFSEEAIAA------------ISRLANAGI-ILLSQSVLLKGIND 249
                 N        E                +     AG   +    V +KG+ND
Sbjct: 115 --VARINVSLDSLKPEVFKQVTGGKLEKVLDGLMAAKAAGFSPIKINMVAMKGVND 168


>gi|293412933|ref|ZP_06655601.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291468580|gb|EFF11073.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 445

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIINTLREKLPLTPDCEITIEGRVLNFDAERIDA 164


>gi|289578370|ref|YP_003476997.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter italicus
           Ab9]
 gi|297544647|ref|YP_003676949.1| MiaB-like tRNA modifying protein YliG [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|289528083|gb|ADD02435.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter italicus
           Ab9]
 gi|296842422|gb|ADH60938.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
          Length = 436

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 18/140 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150
             LK+   C   C FC    + G  +   +  +D       + +K     ++        
Sbjct: 146 AYLKIAEGCSNVCSFCAIPRIRGRYRSRKM--EDILKEAEELVKKGAKELILIAQDTTKY 203

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
           G D  I     L ++LK L  I +++ +R         P  +  ELI+ +K   K V YI
Sbjct: 204 GID--IYKKFMLPQLLKELSLIPNLKWIRL----LYAYPDSVTDELIEEIKANKKVVKYI 257

Query: 210 AIHANHPYEFSEEAIAAISR 229
            I   H     +E +  + R
Sbjct: 258 DIPLQHSN---DEVLKRMKR 274


>gi|228949292|ref|ZP_04111556.1| antilisterial bacteriocin (subtilosin) production [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
 gi|228810418|gb|EEM56775.1| antilisterial bacteriocin (subtilosin) production [Bacillus
           thuringiensis serovar monterrey BGSC 4AJ1]
          Length = 462

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           YP    +++ + C V CR C+     G+ K  V+S    ++ L  +     +  +  TGG
Sbjct: 122 YPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSIDQIKSLLDDL-NHIGVKLIELTGG 178

Query: 153 DPLILSHKRLQKVL 166
           D  +  +  L+++L
Sbjct: 179 DITVHPN--LKEIL 190


>gi|170756363|ref|YP_001782065.1| hypothetical protein CLD_2115 [Clostridium botulinum B1 str. Okra]
 gi|169121575|gb|ACA45411.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra]
          Length = 444

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L +   C   C FCF  ++    + T+    D ++ L+++Q       +  T      
Sbjct: 79  AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
           +  + + +++     I  +  +  H+     +P+ R+  +L+                  
Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
              F+      + RLA  GI +  Q VL  G+N + E L   +     L
Sbjct: 163 -NRFAGNLYDRMKRLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209


>gi|121594117|ref|YP_986013.1| molybdenum cofactor biosynthesis protein A [Acidovorax sp. JS42]
 gi|120606197|gb|ABM41937.1| GTP cyclohydrolase subunit MoaA [Acidovorax sp. JS42]
          Length = 378

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 8/83 (9%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F +         +LS ++             + ++  TGG+
Sbjct: 44  ISVTDRCNFRCGYCMPKEVFDKHYRYLPHSDLLSFEEITRLARLFMAH-GVRKIRLTGGE 102

Query: 154 PLILSHKRLQKVLKTLRYIKHVQ 176
           PL+     L+ ++  L  ++ ++
Sbjct: 103 PLLRKD--LENLVAQLAELRTLE 123


>gi|331270008|ref|YP_004396500.1| MiaB-like tRNA modifying protein [Clostridium botulinum BKT015925]
 gi|329126558|gb|AEB76503.1| MiaB-like tRNA modifying enzyme [Clostridium botulinum BKT015925]
          Length = 433

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 21/128 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  LK+   C  +C +C             + SK+ E  +  +++ S+    EVI +G
Sbjct: 141 KTRAFLKIQDGCNNFCSYCLI-----PFARGAVCSKNPETIIDEVKKLSEHGFKEVILSG 195

Query: 152 GDP------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            D       L  +   L+ VLK +  I+ +  +R  S    + P+  + ++I+ +    K
Sbjct: 196 IDISSYGVDLEGNWNLLK-VLKAIDEIEGINRVRIGS----IGPEFFDEDIIKEIGSLKK 250

Query: 206 PVYIAIHA 213
              +  H 
Sbjct: 251 ---LCPHF 255


>gi|260072600|gb|ACX30499.1| molybdenum cofactor biosynthesis protein A [uncultured SUP05
           cluster bacterium]
 gi|269467972|gb|EEZ79700.1| molybdenum cofactor biosynthesis protein A [uncultured SUP05
           cluster bacterium]
          Length = 331

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 22/164 (13%)

Query: 99  LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + +   C   C +C R        ++  +LS +D +  +    E   I +V  TGG+PL+
Sbjct: 17  ISITEHCNYRCFYC-RDDEHTPNCKREDILSYEDIQRIVRLFAE-LGISKVRLTGGEPLL 74

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA-- 213
              + + K+ + +  I  ++ +      P+     +  +    L E G   V I+I +  
Sbjct: 75  --RRGIVKIARLISSIDGIKDV------PLSTNAHLLEKFAPKLHENGINRVNISIDSLM 126

Query: 214 -NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
            N   E +      E I  I     +G+  +    V+++G ND+
Sbjct: 127 PNRFKEITRGGDVNEVIKGIDAAIASGMHPIKINMVVMRGNNDN 170


>gi|157373260|ref|YP_001471860.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis
           HAW-EB3]
 gi|157315634|gb|ABV34732.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis
           HAW-EB3]
          Length = 328

 Score = 40.9 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 31/175 (17%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE---KSQIWE 146
           R  + + L +   C   C +C       S+    L+ +       LA++ +   +  + +
Sbjct: 10  RKVEYLRLSVTDRCDFRCVYCM------SEDPCFLNREQVLSLEELAWVGQAFTELGVRK 63

Query: 147 VIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +  TGG+PL+ +   +L K+L  L  +  + +    SR+          +  + ++ +G 
Sbjct: 64  IRLTGGEPLVRTDCDQLVKLLGDLPGLSELSMTTNGSRL---------TKFAEKMRGSGL 114

Query: 206 -PVYIAIHANHPY---EFS-----EEAIAAISRLANAGII-LLSQSVLLKGINDD 250
             + I++    P    E +     E  I  I     AG   +   +V+L+G NDD
Sbjct: 115 GRLNISLDTLKPELFTELTRNGKLERVIEGIDAAKAAGFTRIKINAVILRGQNDD 169


>gi|163814151|ref|ZP_02205543.1| hypothetical protein COPEUT_00305 [Coprococcus eutactus ATCC 27759]
 gi|158450600|gb|EDP27595.1| hypothetical protein COPEUT_00305 [Coprococcus eutactus ATCC 27759]
          Length = 437

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 14/115 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIFT 150
              K+   C   C +C    + G  +   +      A+   +      ++     E    
Sbjct: 142 AYFKIAEGCNKLCTYCIIPHIRGRYR--SIPMDRLLASAEKLAADGIKELVLVAQETTLY 199

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G D  +   K+L ++L  L  I+ ++ +R         P+ I  ELI  + E  K
Sbjct: 200 GVD--LYGGKKLPELLTKLSDIEGIEWIRL----LYCYPEEITDELISVMAENPK 248


>gi|237737359|ref|ZP_04567840.1| radical SAM domain-containing protein [Fusobacterium mortiferum
           ATCC 9817]
 gi|229421221|gb|EEO36268.1| radical SAM domain-containing protein [Fusobacterium mortiferum
           ATCC 9817]
          Length = 222

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +   L  C + C +C  R   G      L S+D       I + S I  +  TGG+PL+
Sbjct: 24  AIFIRLQKCNLNCSYCDTRWANGDDAPYTLMSED--KIYDRILK-SGIKNITLTGGEPLL 80

Query: 157 LSHKRLQKVLKTLRYIKHV 175
                +  +L+ +    ++
Sbjct: 81  HKDVEI--LLEKIGENPNL 97


>gi|229106153|ref|ZP_04236707.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28]
 gi|228677271|gb|EEL31594.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28]
          Length = 373

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ +L   C + C  C R E    +    L+ ++ +  +  I E +    ++FTGGD
Sbjct: 10  PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDNIYEMNNPM-LVFTGGD 67

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+     +  +      IK  + +R  S  P   P  +  E IQ  KE G   +     
Sbjct: 68  PLMRPD--IYDIAD--YAIK--KGVRL-SMTPSATPN-VTKETIQKAKEVGIARWAFSLD 119

Query: 209 -----IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                I  H       +E +   I AI  L    I +   +V+     +  E +A L+  
Sbjct: 120 GPTAEIHDHFRGVEGSFELT---INAIRYLHELEIPVQINTVISNYNVNVLEDMAKLVEE 176

Query: 261 F 261
            
Sbjct: 177 L 177


>gi|288572914|ref|ZP_06391271.1| MiaB-like tRNA modifying enzyme [Dethiosulfovibrio peptidovorans
           DSM 11002]
 gi|288568655|gb|EFC90212.1| MiaB-like tRNA modifying enzyme [Dethiosulfovibrio peptidovorans
           DSM 11002]
          Length = 432

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 10/111 (9%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            R  LK+   C  +C +C    + G      L   D E  +  + E S   E++ TG   
Sbjct: 144 TRAFLKVQDGCDHFCSYCIIPFLRGKPVSRPL--DDLEREVRSVVE-SGCPEIVLTGVHL 200

Query: 155 LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            +   +    L  +L+ +  I  V+ +RF S    ++P  +  +L+  + E
Sbjct: 201 GLYGREGGPGLADLLRAVGAIDGVKRIRFGS----LEPFSVGDDLLDAMAE 247


>gi|218707132|ref|YP_002414651.1| coproporphyrinogen III oxidase [Escherichia coli UMN026]
 gi|293407121|ref|ZP_06651045.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298382869|ref|ZP_06992464.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           FVEC1302]
 gi|300898197|ref|ZP_07116554.1| radical SAM domain protein [Escherichia coli MS 198-1]
 gi|331665122|ref|ZP_08366023.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA143]
 gi|218434229|emb|CAR15147.1| putative oxygen independent coproporphyrinogen III oxidase
           (chuW-like) [Escherichia coli UMN026]
 gi|291425932|gb|EFE98966.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412]
 gi|298276705|gb|EFI18223.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli
           FVEC1302]
 gi|300358113|gb|EFJ73983.1| radical SAM domain protein [Escherichia coli MS 198-1]
 gi|331057632|gb|EGI29618.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli TA143]
          Length = 445

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 24/167 (14%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGD---NNHSPLKGIVHRYP 94
           LTP  A  ++   P  D   R  +P +  + +  E+      +      SP         
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTASP--------R 56

Query: 95  DRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIF 149
            R++   +  C  +C FC F +           +    ++ E  A + + + + I  V F
Sbjct: 57  KRLIYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYF 116

Query: 150 TGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRIN 193
            GG P  LS   L +++ TLR    +     +    RV   D +RI+
Sbjct: 117 GGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERID 163


>gi|291522480|emb|CBK80773.1| Radical SAM superfamily [Coprococcus catus GD/7]
          Length = 278

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           ++ +Y  ++ L +L  C   C  CF R   GS K  ++  KD +  +    E   + E  
Sbjct: 1   MLKKY--KVNLHVLEACNFRCFHCFSR--FGSNK--IMGLKDWKQIVDNCMESQVVSEFN 54

Query: 149 FTGGDPLILSHKR-LQKVLKT 168
             GG+PL+      L K ++ 
Sbjct: 55  IAGGEPLLYKDLIGLTKYIRE 75


>gi|323526884|ref|YP_004229037.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
           CCGE1001]
 gi|323383886|gb|ADX55977.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp.
           CCGE1001]
          Length = 369

 Score = 40.9 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R +            +LS ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRAVFDKDYAFLPHSALLSFEEIERLARLFVAH-GVEKIRLTGGE 99

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K L+ +++ L  +
Sbjct: 100 PLL--RKNLEFLIERLSQL 116


>gi|320104529|ref|YP_004180120.1| GTP cyclohydrolase subunit MoaA [Isosphaera pallida ATCC 43644]
 gi|319751811|gb|ADV63571.1| GTP cyclohydrolase subunit MoaA [Isosphaera pallida ATCC 43644]
          Length = 341

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 19/159 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C    +    +  +LS ++ E  +  +     I ++  TGG+PL+  
Sbjct: 29  ISVTDRCNIRCVYCMPETVQFLPRAEILSFEEIERVVR-VAVGLGINKLRLTGGEPLVRR 87

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP- 216
              L K++  L  I  +Q +   +   ++ P      L Q L +AG + + +++    P 
Sbjct: 88  D--LTKLVARLTAIPGIQDVGLTTNGLLLGP------LAQPLWDAGLRRINVSLDTLDPV 139

Query: 217 --YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGI 247
              E +     E+ I  I     AG   +   +V +KG+
Sbjct: 140 SFRELTRRDGLEQVIEGILAAKRAGFDPVKINAVAIKGV 178


>gi|297171740|gb|ADI22732.1| 2-methylthioadenine synthetase [uncultured verrucomicrobium
           HF0500_27H16]
          Length = 439

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 16/140 (11%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG 152
            R  LK+   C   C FC     +         S+D +  L   Q      + E+I TG 
Sbjct: 148 QRANLKIQDGCDFMCTFC-----IIPFARGRARSRDFQNLLEEAQNLVARGVRELIITGV 202

Query: 153 DPLI--LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           +      S + +  ++  L  +  +  +R  S  P   P+     L + +++    +   
Sbjct: 203 NIGTYKHSGEGIVDIVDALDDLDGLTRIRISSIEPTTIPEI----LFERMRDPSHALLPY 258

Query: 211 IHANHPYEF-SEEAIAAISR 229
           +H   P +  S+E + A+ R
Sbjct: 259 LHI--PLQAGSDEILEAMRR 276


>gi|317488728|ref|ZP_07947264.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|316912159|gb|EFV33732.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
          Length = 435

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 62/177 (35%), Gaps = 22/177 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGDPLI 156
             L   C   C FCF           +  +      +    +    ++  V  TGG+PL+
Sbjct: 89  FFLSLACNRSCYFCFNANQA-DYADRLRVNDAWRDEVDAFADACGGEVTHVGLTGGEPLL 147

Query: 157 LSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG---KPVYI-- 209
            + + +     ++      H+++              ++  L+  L++AG     + I  
Sbjct: 148 HADESVAFCAYVRQRFPRAHIRLYTAG--------DFLDEPLLDRLRDAGLDELRMSIKL 199

Query: 210 -AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
             +  +   E  ++A+  ++R       ++ +  ++ G     E +  L+    ++ 
Sbjct: 200 DVLDVDRADEIIDDAVDVLARAKRFIPQVMVEMPVMPG---TGEAMRRLLDRLDQVG 253


>gi|251772224|gb|EES52794.1| conserved protein of unknown function [Leptospirillum
           ferrodiazotrophum]
          Length = 464

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (11%)

Query: 195 ELIQCLKEAGKPVYIAIHANHP---YEF-----SEEAIAAISRLANAGIILLSQSVLLKG 246
           + ++ L++   P+YI++HA  P    +      +++ +  + RL N GI L +Q VL+ G
Sbjct: 148 DYLRILEQRLSPLYISVHATEPALRRQILKNDRAQDVLPLLERLCNGGITLHTQVVLMPG 207

Query: 247 INDDPEILANLMRTFVEL 264
           IND  E L    +    L
Sbjct: 208 IND-GEALLRTWKDLSAL 224


>gi|319899903|ref|YP_004159631.1| MiaB-like tRNA modifying enzyme [Bacteroides helcogenes P 36-108]
 gi|319414934|gb|ADV42045.1| MiaB-like tRNA modifying enzyme [Bacteroides helcogenes P 36-108]
          Length = 439

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 14/151 (9%)

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           HS           R  LK+   C  YC +C        +      +   E A   + +  
Sbjct: 137 HSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTI-PFARGRSRNGTVASMVEQARQAVADGG 195

Query: 143 QIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
              E++ TG   GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ 
Sbjct: 196 --KEIVLTGVNIGDFGKSTGETFFDLVKALDGVEGIERYRISS----IEPNLLTDEIIEY 249

Query: 200 LKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
           +  + +      H + P    S+E +  + R
Sbjct: 250 VAGSRR---FMPHFHIPLQSGSDEVLKLMRR 277


>gi|312897518|ref|ZP_07756938.1| radical SAM protein family [Megasphaera micronuciformis F0359]
 gi|310621370|gb|EFQ04910.1| radical SAM protein family [Megasphaera micronuciformis F0359]
          Length = 349

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 26/159 (16%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           +      CP  C FC +   V  Q      +   +    Y ++K   +EV F GG     
Sbjct: 8   VFIPHLGCPHRCVFCDQ-HTVTGQAEVPTGADTAQKIATYTRKKGAAYEVAFYGG-SFTA 65

Query: 158 SHKRL-QKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
               L +++L+          V  +R  +R     P  I+ E++  LK  G + V + + 
Sbjct: 66  VSATLQEELLQPAYEALQNGLVSAIRCSTR-----PDCIDDEVLNRLKRYGVRTVELGVQ 120

Query: 213 AN-----------HPYEFSEEAIAAISRLANAGIILLSQ 240
           +            H  E   +   A+S L  +G  +  Q
Sbjct: 121 SMDDRVLQAAKRGHTSE---DVYRAVSLLKKSGFTIGLQ 156


>gi|284518792|gb|ADB92509.1| radical SAM family protein [Desulfotignum phosphitoxidans]
          Length = 505

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 20/137 (14%)

Query: 55  PIARQFIPQKEELNILPEEREDPIGDNNHSP-LKGIV--HRYPDR-ILLKLLHVCPVYCR 110
           P+ R  +P  E +  +PE R+   G+N   P   G+   H+     +LL++   C ++CR
Sbjct: 60  PVWRNHVPITEWIGDVPEIRD---GENLDCPHACGLCPDHQRETCCVLLEVTGQCNLHCR 116

Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           FCF          T       +              V  +GG+P  +    L ++++  R
Sbjct: 117 FCFADAAPALDPATETVKGWLDQL-----AVPGKTLVQLSGGEP-TVRDD-LPEIIRHAR 169

Query: 171 YI--KHVQI----LRFH 181
                HVQ+    +R  
Sbjct: 170 QAGCAHVQLNSNGIRLG 186


>gi|295114964|emb|CBL35811.1| Fe-S oxidoreductase [butyrate-producing bacterium SM4/1]
          Length = 290

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 25/168 (14%)

Query: 87  KGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           +GIV+R P      ++++   C    C FC    M  ++   V S  +    L   +   
Sbjct: 4   EGIVYRPPSEARSLIVQVTIGCAHNTCTFC---NMYKAKDFRVRSMDEIMEDLR--EAHD 58

Query: 143 Q----IWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELI 197
                + +V    GD L+L  ++L  +L  +R +  +   +R  S     D  R + E +
Sbjct: 59  GYGAYVQKVFLADGDALVLQTEKLLAILDAVRELFPN--CVRVASYGTAQDILRKSEEEL 116

Query: 198 QCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGII 236
           + LKEAG  +      +   E          + E      +L   GI 
Sbjct: 117 RQLKEAGLGIVYVGAESGDDEILREINKGVTARELKEVGQKLKRCGIQ 164


>gi|256374624|ref|YP_003098284.1| molybdenum cofactor biosynthesis protein A [Actinosynnema mirum DSM
           43827]
 gi|255918927|gb|ACU34438.1| molybdenum cofactor biosynthesis protein A [Actinosynnema mirum DSM
           43827]
          Length = 341

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 41/226 (18%), Positives = 81/226 (35%), Gaps = 47/226 (20%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C   E +   +   +LS ++    +     +  + +V FTGG+PL+ 
Sbjct: 29  VSLTDKCNLRCTYCMPAEGLDWLRGPELLSDEELVRVIGIAVTRLGVTDVRFTGGEPLL- 87

Query: 158 SHKRLQKVLKT---LRYIKHVQI----LRFHSRVPIVDPQ----RINPELIQCLKEAGKP 206
             + L+ VL     L       +    +   +R           R+N  L    +E    
Sbjct: 88  -RRGLEDVLAATTALEPRPRTSMTTNGISLATRA-AGLKAAGLDRVNVSLDTLDRERF-- 143

Query: 207 VYIAIHANHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRT 260
                      E +      + +A ++    AG+  +   SVL++G+NDD  +   L+  
Sbjct: 144 ----------RELTRRDRLPDVLAGLAAAREAGLEPVKINSVLMRGVNDDEAV--ALVEF 191

Query: 261 FVELRIKPYYLHHPDLAA-----GTSHF-RLTIEEGQKIVASLKEK 300
            VE        +               + R  +   Q+I+ +L  +
Sbjct: 192 AVEHG------YQLRFIEQMPLDPQHGWDRSEMVTAQEILDALGTR 231


>gi|114049235|ref|YP_739785.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. MR-7]
 gi|113890677|gb|ABI44728.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. MR-7]
          Length = 337

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 60/160 (37%), Gaps = 17/160 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +  VC   C +C       + +   LS  + E  ++   +     ++  TGG+P +  
Sbjct: 28  MSVTDVCNFKCSYCLPDGYHPNGRQQFLSLSEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
                 +++ +         R H+     +  R+     +      + + +++ +  P  
Sbjct: 87  D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAQEWFDAGLRRINVSVDSLDPKM 139

Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
             + +      E +  I    +AG   +   +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND 179


>gi|283782458|ref|YP_003373213.1| radical SAM enzyme, Cfr family [Pirellula staleyi DSM 6068]
 gi|283440911|gb|ADB19353.1| radical SAM enzyme, Cfr family [Pirellula staleyi DSM 6068]
          Length = 391

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 33/190 (17%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIFTG-GDPLILSH 159
            C + C FC     +      + + +  E  L     + EK ++  ++  G G+PL    
Sbjct: 143 GCAMGCVFCASG--LDGVDRNLTAGEIVEQMLLLQRLLPEKERLSHIVMMGMGEPLANID 200

Query: 160 KRLQKVLKTLRY----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH--- 212
             L+ + +  R     I   + +   +   +  P  +  +L     +    + +++H   
Sbjct: 201 HVLEALGEATREDGLGISP-RRITIST---VGLPAAL-DKLCNLEAKY--HLAVSLHAPN 253

Query: 213 ---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF-- 261
                     N      +   +A      +G  L  + VLL G+ND P+    L      
Sbjct: 254 NELRTRLVPINKAIGIEKVIESADRYFETSGRRLTFEYVLLAGVNDHPDHAQELAELLAG 313

Query: 262 --VELRIKPY 269
               L + PY
Sbjct: 314 RTAMLNVIPY 323


>gi|289192435|ref|YP_003458376.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
 gi|288938885|gb|ADC69640.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
          Length = 377

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 14/143 (9%)

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
           EE+    EE  D + +     +KG      ++++L +  +C   C +C   E   ++   
Sbjct: 4   EEIEKYLEENFDKLPEGCKQCVKG------EKLVLFITGICNNNCYYCPLSEKRKNKDVI 57

Query: 125 VLSSKDTEAALAYIQEKS--QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
             + +        I+E        V  TGG+PL L   R  K LK L+     +   FH+
Sbjct: 58  YANERLITTVEEAIEEAKLCSSKGVGITGGNPL-LKINRTVKFLKALKN----EFDEFHA 112

Query: 183 RVPIVDPQRINPELIQCLKEAGK 205
                 P+ IN E ++ LKEAG 
Sbjct: 113 -HLYTTPETINEENLKLLKEAGL 134


>gi|260427313|ref|ZP_05781292.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citreicella sp. SE45]
 gi|260421805|gb|EEX15056.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citreicella sp. SE45]
          Length = 435

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 5/93 (5%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
              L +   C  +C FC      G++  +  + +    A   ++    + E+   G +  
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRVLTEARDLVER--GVREITLLGQNVN 206

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                 + L  +++ L  I  ++ +RF +  P 
Sbjct: 207 AYHGHDRGLAGLIRELAAIDGLERIRFTTSHPN 239


>gi|194290177|ref|YP_002006084.1| molybdenum cofactor biosynthesis protein a [Cupriavidus taiwanensis
           LMG 19424]
 gi|193224012|emb|CAQ70021.1| MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A [Cupriavidus taiwanensis
           LMG 19424]
          Length = 389

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 48/214 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+            +LS ++ E           + ++  TGG+
Sbjct: 62  ISVTDRCNFRCVYCMPKEVFDKDYTFLPHSELLSFEEIERTARLFVAH-GVEKIRLTGGE 120

Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191
           PL+   K ++ +++ L  I+ V                    + LR    +RV +     
Sbjct: 121 PLL--RKNIEHLVEMLAKIETVSGKPLDLTLTTNASLLARKARALRDAGLTRVSVSL-DA 177

Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
           I+    + + +    V   +H         E   A+         +    V+ +G ND  
Sbjct: 178 IDDATFRRMNDVDFAVADVLH-------GIETAQAVGL-----APIKVNMVVKRGTND-- 223

Query: 252 EILANLMRTFVELRIKPYYLHHP-DLAAGTSHFR 284
           + +  + R F    I              ++H++
Sbjct: 224 QEIVPMARHFRHSGII--LRFIEFMDVGASNHWQ 255


>gi|229917969|ref|YP_002886615.1| Radical SAM domain protein [Exiguobacterium sp. AT1b]
 gi|229469398|gb|ACQ71170.1| Radical SAM domain protein [Exiguobacterium sp. AT1b]
          Length = 360

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 14/117 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTG 151
           P  ++ ++   C + C  C         +  +    DTE   A I+E   +    ++FTG
Sbjct: 10  PFIVIWEVTRACALSCVHCRAEAQFHRYENEL----DTEEGKALIREIHAMDNPILVFTG 65

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           GDPL+     L ++      +      R  S  P   P R+  + ++  K AG   +
Sbjct: 66  GDPLMRED--LFELTAYASSLGM----RV-SMTPSATP-RVTHDAVKRAKAAGLSRW 114


>gi|150390308|ref|YP_001320357.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus
           metalliredigens QYMF]
 gi|229890435|sp|A6TR80|MIAB_ALKMQ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|149950170|gb|ABR48698.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus
           metalliredigens QYMF]
          Length = 476

 Score = 40.9 bits (95), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 51/118 (43%), Gaps = 16/118 (13%)

Query: 78  IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           + D     ++G+    +Y  +  + ++  C  +C +C      G ++     S++ +  +
Sbjct: 165 VWDKEGDIVEGLPVTRKYGLKAFINIMFGCNNFCTYCIVPHTRGRER-----SREVQEII 219

Query: 136 AYIQ--EKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVP 185
             ++   K+   E+   G + +    K L++      +LK L  I+ ++ +RF +  P
Sbjct: 220 DEVEELAKNGTKEITLLGQN-VNSYGKTLEEETDFGNLLKVLNKIEGIERIRFMTSHP 276


>gi|308051310|ref|YP_003914876.1| molybdenum cofactor biosynthesis protein A [Ferrimonas balearica
           DSM 9799]
 gi|307633500|gb|ADN77802.1| molybdenum cofactor biosynthesis protein A [Ferrimonas balearica
           DSM 9799]
          Length = 328

 Score = 40.9 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 27/166 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C   +     +  VL+ ++         E   + ++  TGG+PL+ S
Sbjct: 16  MSVTDHCDFRCVYCMDEDPTFLPRDQVLTLEELHQIAQAFTE-LGVEKIRLTGGEPLVKS 74

Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
              L  +++ +  +  ++ L      SR+          +  Q L+ AG K + I++   
Sbjct: 75  D--LTYLVEQVAALPGLRDLCLTTNGSRL---------KKFAQPLQAAGLKRINISLDTL 123

Query: 215 HPYEFSEEAI--------AAISRLANAGI--ILLSQSVLLKGINDD 250
            P  F+            A I     AG   I L+ +V +KG NDD
Sbjct: 124 DPERFTAVTRNGKLERVLAGIDAAIEAGFERIKLN-TVAMKGSNDD 168


>gi|332799055|ref|YP_004460554.1| MiaB-like tRNA modifying enzyme [Tepidanaerobacter sp. Re1]
 gi|332696790|gb|AEE91247.1| MiaB-like tRNA modifying enzyme [Tepidanaerobacter sp. Re1]
          Length = 435

 Score = 40.9 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 49/133 (36%), Gaps = 26/133 (19%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVI 148
           HR   R  LK+   C ++C +C     +       + S+  +  +   Q   K    E++
Sbjct: 139 HRQKTRAFLKIQDGCNMFCSYC-----IIPYARGPVRSRSIDNIIDEAQSLAKDGFKEIV 193

Query: 149 FT-------GGDPLILSHKRLQKV--LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
            T       G D      + +  +  +  +  I+ ++ +R  S    ++   +  E ++ 
Sbjct: 194 LTGIHLGLYGRD---FKDENIHLLDVISRIADIEGIERIRLSS----IEAMELTDEFLKS 246

Query: 200 L---KEAGKPVYI 209
           L   K+     ++
Sbjct: 247 LCGIKKFCHHFHV 259


>gi|24213838|ref|NP_711319.1| 2-methylthioadenine synthetase [Leptospira interrogans serovar Lai
           str. 56601]
 gi|81589771|sp|Q8F710|RIMO_LEPIN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|24194676|gb|AAN48337.1| 2-methylthioadenine synthetase [Leptospira interrogans serovar Lai
           str. 56601]
          Length = 437

 Score = 40.9 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 29/160 (18%)

Query: 56  IARQFIPQKEELNILPEEREDPIGD--NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC- 112
           I R+  P   EL+    E  D + +     S ++     Y     +K+   C   C FC 
Sbjct: 112 ILREKFP---ELSPSQLEFNDSLLERWKLSSKIENYSKPY---AYVKVSDGCNRGCSFCI 165

Query: 113 ---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKV 165
              FR + V S    +L  +DT  A+       +I     + ++ G D      + L  +
Sbjct: 166 IPSFRGKFVESPLDDIL--RDTNRAIR--AGAKEICLVSQDTVYYGRDS-----EILLDM 216

Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           ++ +  I  ++ILR       + P +   +LI+ + E  K
Sbjct: 217 VRKVAEIDSLEILRL----LYLYPDKKTEKLIRLMGETSK 252


>gi|113968617|ref|YP_732410.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. MR-4]
 gi|113883301|gb|ABI37353.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. MR-4]
          Length = 337

 Score = 40.9 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 60/160 (37%), Gaps = 17/160 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +  VC   C +C       + +   LS  + E  ++   +     ++  TGG+P +  
Sbjct: 28  MSVTDVCNFKCSYCLPDGYHPNGRQQFLSLSEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
                 +++ +         R H+     +  R+     +      + + +++ +  P  
Sbjct: 87  D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAQEWFDAGLRRINVSVDSLDPKM 139

Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
             + +      E +  I    +AG   +   +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND 179


>gi|125973459|ref|YP_001037369.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum ATCC
           27405]
 gi|256005355|ref|ZP_05430320.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum DSM
           2360]
 gi|281417660|ref|ZP_06248680.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum
           JW20]
 gi|238065327|sp|A3DDZ7|RIMO_CLOTH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|125713684|gb|ABN52176.1| SSU ribosomal protein S12P methylthiotransferase [Clostridium
           thermocellum ATCC 27405]
 gi|255990674|gb|EEU00791.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum DSM
           2360]
 gi|281409062|gb|EFB39320.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum
           JW20]
 gi|316940304|gb|ADU74338.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum DSM
           1313]
          Length = 453

 Score = 40.9 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 13/126 (10%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP-L 155
             LK+   C   C +C    + G  +   +  +D  +   ++     + EVI    D  +
Sbjct: 154 AYLKISEGCDNRCTYCAIPYIRGPYRSRKM--EDIISEAEFLAG-KGVKEVILVAQDVTV 210

Query: 156 ILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
                   K+L ++++ +  I+ ++ +R         P+ I+ ELI+ +    K V Y+ 
Sbjct: 211 YGKDLYGQKKLVELVREVSGIEGIEWIRL----LYTYPEEIDEELIKEIANNEKVVKYLD 266

Query: 211 IHANHP 216
           I   H 
Sbjct: 267 IPIQHA 272


>gi|78223881|ref|YP_385628.1| ribosomal RNA large subunit methyltransferase N [Geobacter
           metallireducens GS-15]
 gi|123742801|sp|Q39S71|RLMN_GEOMG RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|78195136|gb|ABB32903.1| 23S rRNA m(2)A-2503 methyltransferase [Geobacter metallireducens
           GS-15]
          Length = 346

 Score = 40.9 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 46/252 (18%), Positives = 91/252 (36%), Gaps = 48/252 (19%)

Query: 95  DRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
           DR  L +     C + C FC       ++    L++ +    +  ++    +  ++F G 
Sbjct: 102 DRTTLCISSQVGCAMACEFCLTGTFRLTRN---LTAGEIVNQICAVRRDVPVRNIVFMGM 158

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+PL      L  V+K L+ I H   L+F +R   V        L+  ++  G+ V + +
Sbjct: 159 GEPL----ANLDNVVKALKIILHDDGLQFSTRRVTVS----TSGLVPEMERLGREVTVNL 210

Query: 212 HANHPYEFSEEAIAAI---------SRLANAG----------IILLSQSVLLKGINDDPE 252
             +     ++E    I           L +A           I +    V++KG+ND  E
Sbjct: 211 AVS-LNATTDEVRDRIMPVNRRYPLRLLLDACRSYPLPGRRKITIE--YVMIKGLNDSLE 267

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSH----FRLTIEEGQKIVAS--LKEKISGLCQ 306
               L++   ++  K       +L     H    F+   +    +  S  L +  + + +
Sbjct: 268 DAKRLVKLLSDISSK------INLIPFNEHDGCSFKSPDQGAIDVFHSYLLSKHFTVITR 321

Query: 307 PFYILDLPGGYG 318
                D+    G
Sbjct: 322 SSRGSDISAACG 333


>gi|325295010|ref|YP_004281524.1| molybdenum cofactor biosynthesis protein A [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065458|gb|ADY73465.1| molybdenum cofactor biosynthesis protein A [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 324

 Score = 40.9 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 30/179 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQ--IWEVIFTGGDP 154
           + +   C   CR+C    M    K  +  S+    E     ++  ++  I  V  TGG+P
Sbjct: 9   ISVTDRCNFRCRYC----MPEGTKKFIPHSEILRYEEITEIVRVFTEFGIDSVRLTGGEP 64

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA 213
           L+   K ++ ++  +R ++ ++ +   +            E ++ LKE G   V I+I  
Sbjct: 65  LV--RKGIESLIVQIRELEEIRDISLTTNGF------FLSEKVKSLKEHGLNRVNISIDT 116

Query: 214 NHPYEF-----SEEAI------AAISRLANAGI-ILLSQSVLLKGINDDP-EILANLMR 259
             P +F     + +          + +    G+  +   +VL+KG ND   E    L  
Sbjct: 117 LEPEKFGFITGTGDTRTLSRVLHGLEKAIEEGLNPVKVNTVLIKGFNDKEIESFVKLSE 175


>gi|291531886|emb|CBK97471.1| SSU ribosomal protein S12P methylthiotransferase [Eubacterium
           siraeum 70/3]
          Length = 446

 Score = 40.9 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 27/176 (15%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +    P    L++   C   C +C    + G  +   +     E A  +   ++ + E++
Sbjct: 141 LQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKM-ENIIEEAKKF--AENGVKELV 197

Query: 149 FTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
               D       +     L  +LK L  I  ++ +R         P+R+  ELI+ +K  
Sbjct: 198 IVAQDVTAYGIDLYKKYALPDLLKELCKIDGIKWIRL----LYCYPERMTDELIETIKTE 253

Query: 204 GKPV-YIAIHANHPY-EF---------SEEAIAAISRLANA--GIILLSQSVLLKG 246
            K + YI I   H   E           +      ++L     G++L   + L+ G
Sbjct: 254 DKVLNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLR--TTLITG 307


>gi|222111161|ref|YP_002553425.1| molybdenum cofactor biosynthesis protein a [Acidovorax ebreus TPSY]
 gi|221730605|gb|ACM33425.1| molybdenum cofactor biosynthesis protein A [Acidovorax ebreus TPSY]
          Length = 378

 Score = 40.9 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 8/83 (9%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F +         +LS ++             + ++  TGG+
Sbjct: 44  ISVTDRCNFRCGYCMPKEVFDKHYRYLPHSDLLSFEEITRLARLFMAH-GVRKIRLTGGE 102

Query: 154 PLILSHKRLQKVLKTLRYIKHVQ 176
           PL+     L+ ++  L  ++ ++
Sbjct: 103 PLLRKD--LENLVAQLAELRTLE 123


>gi|149200218|ref|ZP_01877240.1| molybdenum cofactor biosynthesis protein A [Lentisphaera araneosa
           HTCC2155]
 gi|149136660|gb|EDM25091.1| molybdenum cofactor biosynthesis protein A [Lentisphaera araneosa
           HTCC2155]
          Length = 335

 Score = 40.9 bits (95), Expect = 0.31,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 8/93 (8%)

Query: 94  PDRIL-LKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           P R L L ++  C   C +C    R      +   +  ++     L+ I  +  +  +  
Sbjct: 10  PMRDLRLSVIDACNFRCLYCMPPDRDYDFFKKNEMLSVNEAIR--LSEIFVQLGVRRIRL 67

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           TGG+PL+     L +++  +  I  ++ L   +
Sbjct: 68  TGGEPLLRKD--LDQIIAGIAKIPELEDLAITT 98


>gi|295103385|emb|CBL00929.1| GTP cyclohydrolase subunit MoaA [Faecalibacterium prausnitzii
           SL3/3]
          Length = 325

 Score = 40.9 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 16/158 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  +C + CR+C    +   ++  VL+ ++     A   +   I  V  TGG+PL+  
Sbjct: 14  LSVTDLCNLRCRYCMPDGVEKLEREAVLTYEEFLRLAALFAQC-GIDTVRVTGGEPLV-- 70

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216
            K + +++  L+    ++ +   +   ++       +L   L      V I++    P  
Sbjct: 71  RKNVAQLVAGLKATPGIRRVTLTTNAVLLA-----EQLPALLDAGLDSVNISLDTLRPEV 125

Query: 217 -YEFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248
             + +           +     +G+ +    V   G+N
Sbjct: 126 FRQITARDDFAAVQTGLQAALESGLPVKLNCVPQAGVN 163


>gi|225028441|ref|ZP_03717633.1| hypothetical protein EUBHAL_02715 [Eubacterium hallii DSM 3353]
 gi|224954239|gb|EEG35448.1| hypothetical protein EUBHAL_02715 [Eubacterium hallii DSM 3353]
          Length = 465

 Score = 40.9 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 14/116 (12%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIF 149
              LK+   C   C +C    + G  +      +D       + E    ++     E   
Sbjct: 163 TAYLKIAEGCNKRCTYCIIPYIRGHYR--SFPMEDLLEEARKLAEGGVKELILIAQETTV 220

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            G D      K L ++L  L  I+ ++ +R         P+ I  ELI  +K+  K
Sbjct: 221 YGMDCY--GRKALPELLTKLCEIEGIEWIRI----LYCYPEEITDELIAVMKKEKK 270


>gi|219669148|ref|YP_002459583.1| MiaB-like tRNA modifying enzyme YliG [Desulfitobacterium hafniense
           DCB-2]
 gi|219539408|gb|ACL21147.1| MiaB-like tRNA modifying enzyme YliG [Desulfitobacterium hafniense
           DCB-2]
          Length = 442

 Score = 40.9 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 20/118 (16%)

Query: 97  ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
             +K+   C  YC +C     R       + ++L  ++ EA          + EV+    
Sbjct: 148 AYVKVAEGCDNYCTYCIIPHVRGHFRSRTQESIL--REVEAM-----ASEGVKEVLLIAQ 200

Query: 153 DPL-ILSHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           D       +    RL  ++K +  I+ ++ +R         P+    ELI  +KE  K
Sbjct: 201 DTTRYGKDRYGEYRLPSLIKEIAGIEGIEWIRL----MYCYPELFTDELITVMKETPK 254


>gi|323704197|ref|ZP_08115776.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323536263|gb|EGB26035.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 467

 Score = 40.9 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 11/109 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  YC +C      G  +    +  D    +  +++     EV+ TG  
Sbjct: 160 HTRAYLKIQDGCNQYCTYCIIPYARGPIRSRKPN--DIFDEVKRLRDN-GYKEVVLTGIH 216

Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
                  L +  L  ++K +  I+ ++ +R  S  P         + ++
Sbjct: 217 VASYGKDLENVDLLDIIKMIHEIEGIERIRLSSIEPTFL----TEDFVR 261


>gi|167749835|ref|ZP_02421962.1| hypothetical protein EUBSIR_00803 [Eubacterium siraeum DSM 15702]
 gi|167657147|gb|EDS01277.1| hypothetical protein EUBSIR_00803 [Eubacterium siraeum DSM 15702]
          Length = 480

 Score = 40.9 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 21/143 (14%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS---------SKDTEAALAYIQEKS-QIWEV 147
           L   +  CP  C +C     + +     L           K+ +     ++  S ++  V
Sbjct: 160 LYISIPFCPSRCSYCS---FISASGEGALKLIDDYFGLLLKELDIYADIVKRFSLKVDTV 216

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KP 206
              GG P  LS  +L  +++ L     +  +R  +      P  I  + ++ LK  G + 
Sbjct: 217 YIGGGTPTTLSASQLDSLIEKLGEFD-IANIREFT-AEAGRPDTITEDKLRALKNGGVRR 274

Query: 207 VYIAIHANHPYEFSEEAIAAISR 229
           + I      P   ++  + A+ R
Sbjct: 275 ISIN-----PQSMNDSVLEAVGR 292


>gi|291547922|emb|CBL21030.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Ruminococcus sp.
           SR1/5]
          Length = 231

 Score = 40.9 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156
           L L+  C + C +CF  E      G  +S +    A+ Y+ E S   +V+ T  GG+PL+
Sbjct: 101 LMLVQGCNLACSYCFGDEGSYCDSG-KMSKETAFKAIDYLFEHSDADKVLITFFGGEPLL 159

Query: 157 LSHKRLQKVLK 167
                +++++ 
Sbjct: 160 AVD-LMKEIIS 169


>gi|33469596|gb|AAQ19837.1| molybdenum cofactor biosynthesis protein A [Alcaligenes faecalis]
          Length = 364

 Score = 40.9 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 16/101 (15%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDT 131
           P+ D +  P++ +         + +   C   C +C     F    V   +  +LS ++ 
Sbjct: 28  PLTDQHGRPVRDLR--------ISVTDRCNFRCTYCMPREVFDDRFVFLPRQDMLSFEEI 79

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           E  LA I     + ++  +GG+PL+     LQ ++  L  +
Sbjct: 80  ER-LARIFVGLGVRKLRLSGGEPLMRKD--LQDLVAKLAQL 117


>gi|85858425|ref|YP_460627.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
 gi|85721516|gb|ABC76459.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
          Length = 369

 Score = 40.9 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 75/209 (35%), Gaps = 32/209 (15%)

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           N SPL   +      +  ++   C + C  C      G   G  LS+++++  L  I   
Sbjct: 2   NSSPLPSTLRM----VAWEVTRSCNLSCIHCRASAEKGPYAGE-LSTEESKNLLEEIAAF 56

Query: 142 SQIWEVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           S+   VI TGG+PL+      L      L        LR    V   +   +   + + +
Sbjct: 57  SRP-VVILTGGEPLLREDIYELAAYGDGLG-------LRM---VLATNGTLVTEGIARRM 105

Query: 201 KEAGKPVYIAIHANHP--------YEFSEEAIAAI---SRLANAGIILLSQSVLLKGIND 249
           +E+G    ++I  + P         + S     A+   + L  AG+     + +    + 
Sbjct: 106 RESGIQ-RVSISLDGPDAESHDAFRQMSGAFAGAMTGIAALKKAGMEFQVNTTIT---ST 161

Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAA 278
           +   L+ +M   V L    +++       
Sbjct: 162 NRHQLSAMMDLAVRLGAAAHHIFLLVPTG 190


>gi|114710|sp|P20714|ANSME_KLEAE RecName: Full=Anaerobic sulfatase-maturating enzyme; Short=AnSME;
           AltName: Full=Arylsulfatase-activating protein; AltName:
           Full=Ser-type sulfatase-activating enzyme
 gi|149165|gb|AAA25050.1| atsB protein [Klebsiella aerogenes]
          Length = 405

 Score = 40.9 bits (95), Expect = 0.32,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 83/232 (35%), Gaps = 34/232 (14%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135
           P+     SP+   +   P      +   C + CR+C+       +     +     E  +
Sbjct: 13  PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDETPVNKMDDARLEQFI 63

Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189
             YI  +     +I   ++ GG+PL+      +K L    RY      +   S     + 
Sbjct: 64  RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119

Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242
             IN    +  +E G  + +++  N   + +        S  + A  GI LL Q  V   
Sbjct: 120 TLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVDFN 179

Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           LL  + N+     A +    V L  + Y    P ++ G +     + EG ++
Sbjct: 180 LLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225


>gi|160895257|ref|ZP_02076029.1| hypothetical protein CLOL250_02817 [Clostridium sp. L2-50]
 gi|156863136|gb|EDO56567.1| hypothetical protein CLOL250_02817 [Clostridium sp. L2-50]
          Length = 472

 Score = 40.9 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 38/162 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+    D ++ L+++Q       +  T      +
Sbjct: 83  LMSDYRSCTNKCMFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 132

Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
           + + + +++K  L  I     +   +              ++C           +H    
Sbjct: 133 TDEDVDRIIKMQLAPI----NISIQT----------TNPDLRC---------KMLH---- 165

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
             F+ + +  + RL    + +  Q VL K +ND  E+  ++ 
Sbjct: 166 NRFAGDRLKYLDRLFEGHVEMNGQIVLCKHVNDGTELERSIR 207


>gi|257438716|ref|ZP_05614471.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium
           prausnitzii A2-165]
 gi|257198851|gb|EEU97135.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium
           prausnitzii A2-165]
          Length = 326

 Score = 40.9 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 9/166 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  +C + CR+C    +   ++  +L+ ++    LA +  +  +  V  TGG+PL+  
Sbjct: 14  LSVTDLCNLRCRYCMPDGVDKLEREDILTYEEFLR-LAALFARCGVDTVRVTGGEPLV-- 70

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIV---DPQRINPELIQC-LKEAGKPVYIAIHAN 214
            K +++++K L+ I  ++ +   +   ++    P  +   L    +        +     
Sbjct: 71  RKGVEQLVKGLKAIPGIRKVTMTTNAVLLEQQLPALLEAGLDSVNISLDTLDPALFAKIT 130

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMR 259
              EF     A I     +GI +    V   G+N+   E LA L +
Sbjct: 131 ARDEF-AAVQAGIHAALESGIPVKLNCVPQVGVNEGELEALAALAQ 175


>gi|313905328|ref|ZP_07838694.1| MiaB-like tRNA modifying enzyme [Eubacterium cellulosolvens 6]
 gi|313469798|gb|EFR65134.1| MiaB-like tRNA modifying enzyme [Eubacterium cellulosolvens 6]
          Length = 437

 Score = 40.9 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 51/127 (40%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  +K+   C  +C +C      G  +   ++  D    +  +   S + EV+ T   
Sbjct: 145 HTRAFIKVQDGCNQFCTYCIIPYARGRVRSRKIA--DVYEEVKRLAA-SGVKEVVVTGIH 201

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
               G D  +   + L  +++ +  ++ ++ +R  S    ++P  I+ + I+ L E  K 
Sbjct: 202 VCSYGKD--LGEGEDLLALIRAVNEVEGIERIRLGS----LEPGSISEDFIKALSEMPK- 254

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 255 --VCPHF 259


>gi|225011708|ref|ZP_03702146.1| MiaB-like tRNA modifying enzyme [Flavobacteria bacterium MS024-2A]
 gi|225004211|gb|EEG42183.1| MiaB-like tRNA modifying enzyme [Flavobacteria bacterium MS024-2A]
          Length = 450

 Score = 40.9 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 33/163 (20%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  LK+   C   C +C        Q   V  S   E  +  +++   S + E++ TG
Sbjct: 154 RTRAFLKVQDGCDYKCTYCTI-----PQARGVSRSDTLENIINNVKKIGDSGLREIVLTG 208

Query: 152 ---GDPL---ILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQCLKEAG 204
              GD       + K     L+ +  I  V+ + R   R+  ++P  +N ++I  +  + 
Sbjct: 209 VNIGDYGKGEFGNKKHQHTFLELINAIDMVKSIDRI--RISSIEPNLLNDDIIDFVSGSN 266

Query: 205 KPVYIAIHANHPYE--------------FSEEAIAAISRLANA 233
           +      H + P +               +   +  ++R+  A
Sbjct: 267 R---FVPHFHIPLQSGSDRILKSMRRRYLTPLYLQRVARIKEA 306


>gi|210610113|ref|ZP_03288275.1| hypothetical protein CLONEX_00461 [Clostridium nexile DSM 1787]
 gi|210152625|gb|EEA83631.1| hypothetical protein CLONEX_00461 [Clostridium nexile DSM 1787]
          Length = 507

 Score = 40.9 bits (95), Expect = 0.33,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 41/172 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L+     C   C FCF  +M    + T+           Y ++      + F  G+ + L
Sbjct: 118 LMSEYRTCSNKCIFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITL 164

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216
           ++ +L  +          +I++ H     +  Q  NPEL  + L           H    
Sbjct: 165 TNMKLPDI---------ERIIQMHLAPINISVQTTNPELRCKML-----------H---- 200

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE---ILANLMRTFVELR 265
             F+ E +  +  L    I +  Q V+ K +ND  E    + +L +    +R
Sbjct: 201 NRFAGEKLKFLDILYENHIEMNGQVVVCKNVNDGKELERTIDDLSKFLPFMR 252


>gi|21674009|ref|NP_662074.1| florfenicol resistance protein, putative [Chlorobium tepidum TLS]
 gi|81791215|sp|Q8KD71|RLMN_CHLTE RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|21647156|gb|AAM72416.1| florfenicol resistance protein, putative [Chlorobium tepidum TLS]
          Length = 374

 Score = 40.9 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 42/184 (22%)

Query: 104 VCPVYCRFC------FRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDP 154
            CP+ C FC      FRR +  S+      L  K+ +      +    +  ++F G G+P
Sbjct: 138 GCPLRCTFCATGHMGFRRNLTASEITDQVFLLEKEAQK-----RHWRGLTNIVFMGMGEP 192

Query: 155 LILSHKRLQKVLKTLRYIK-----HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           L+     L+ +  TL           + +   +   +  P  ++      +  +G    +
Sbjct: 193 LLNLDNVLESI-GTLTEKDYQFSISERKITIST---VGLPVEMD-----RIARSGLKTKL 243

Query: 210 AIHANHPYEFSEE---------AIAAISRLANAGIILLSQSV-----LLKGINDDPEILA 255
           AI  +   +   E          +  +++  N+   + SQ V     LL+GIND PE   
Sbjct: 244 AISLHSADQLIRERMMPIAADITLDKLAKAINSYNSVTSQPVTLVYMLLEGINDSPEDAR 303

Query: 256 NLMR 259
            L+R
Sbjct: 304 KLVR 307


>gi|291556571|emb|CBL33688.1| SSU ribosomal protein S12P methylthiotransferase [Eubacterium
           siraeum V10Sc8a]
          Length = 446

 Score = 40.9 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 27/176 (15%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +    P    L++   C   C +C    + G  +   +     E A  +   ++ + E++
Sbjct: 141 LQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKM-ENIIEEAKKF--AENGVKELV 197

Query: 149 FTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
               D       +     L  +LK L  I  ++ +R         P+R+  ELI+ +K  
Sbjct: 198 IVAQDVTAYGIDLYKKYALPDLLKQLCKIDGIKWIRL----LYCYPERMTDELIETIKTE 253

Query: 204 GKPV-YIAIHANHPY-EF---------SEEAIAAISRLANA--GIILLSQSVLLKG 246
            K + YI I   H   E           +      ++L     G++L   + L+ G
Sbjct: 254 DKVLNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLR--TTLITG 307


>gi|167750131|ref|ZP_02422258.1| hypothetical protein EUBSIR_01100 [Eubacterium siraeum DSM 15702]
 gi|167656874|gb|EDS01004.1| hypothetical protein EUBSIR_01100 [Eubacterium siraeum DSM 15702]
          Length = 446

 Score = 40.9 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 27/176 (15%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +    P    L++   C   C +C    + G  +   +     E A  +   ++ + E++
Sbjct: 141 LQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKM-ENIIEEAKKF--AENGVKELV 197

Query: 149 FTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
               D       +     L  +LK L  I  ++ +R         P+R+  ELI+ +K  
Sbjct: 198 IVAQDVTAYGIDLYKKYALPDLLKQLCKIDGIKWIRL----LYCYPERMTDELIETIKTE 253

Query: 204 GKPV-YIAIHANHPY-EF---------SEEAIAAISRLANA--GIILLSQSVLLKG 246
            K + YI I   H   E           +      ++L     G++L   + L+ G
Sbjct: 254 DKVLNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLR--TTLITG 307


>gi|91201666|emb|CAJ74726.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 356

 Score = 40.9 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 15/127 (11%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQ--IW 145
           IV +Y +  +      CP  C FC + ++ G+   ++   K+    +A Y++   +  I 
Sbjct: 22  IVKKYSNIPIFIPELACPHQCVFCNQAKISGTY--SIPQPKEIRHIVAQYLETIPENRII 79

Query: 146 EVIFTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLK 201
            + F GG         L ++ LK     +K+  V  +R  +R     P  IN  +++ LK
Sbjct: 80  NIAFFGG-SFTGIPVDLQEQYLKEAYGFVKNGKVSGIRLSTR-----PDYINETILELLK 133

Query: 202 EAGKPVY 208
           + G    
Sbjct: 134 KYGVTTI 140


>gi|331269617|ref|YP_004396109.1| MiaB family RNA modification protein [Clostridium botulinum
           BKT015925]
 gi|329126167|gb|AEB76112.1| RNA modification enzyme, MiaB family [Clostridium botulinum
           BKT015925]
          Length = 444

 Score = 40.9 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 22/119 (18%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTG 151
             +++   C  +C +C   ++ G  +   + S     K+  A          + E+I  G
Sbjct: 147 AYIRISEGCDNFCTYCIIPKIRGKYRSRSIDSIVKEAKELSAM--------GVKELILVG 198

Query: 152 GDPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            D  I      +  +L ++++ +  I+ ++ +R    V    P+ I  ELI+ +K   K
Sbjct: 199 QDTAIYGRDIYNENKLPELIRAISEIEAIEWIR----VLYTYPEEITDELIEEIKSNDK 253


>gi|327542013|gb|EGF28512.1| ribosomal RNA large subunit methyltransferase N [Rhodopirellula
           baltica WH47]
          Length = 365

 Score = 40.9 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 77/237 (32%), Gaps = 52/237 (21%)

Query: 94  PDRILLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIF 149
           P R +     V C + C FC     +      +   +  E  L     +    ++  ++ 
Sbjct: 116 PRRSICVSSQVGCAMGCVFCASG--LDGVDRNLTGGEILEQMLRLQQRLPADERLSHIVM 173

Query: 150 TG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELIQCLKE 202
            G G+PL      L  VL  L   +    L          P+RI       P  I  L  
Sbjct: 174 MGMGEPL----ANLPGVLSALDVARSEDGLGI-------SPRRITISTVGLPPAIDKLAA 222

Query: 203 AGKP--VYIAIH------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
           AG P  + +++H             N          AA      +G  L  + VLL GIN
Sbjct: 223 AGIPYNLAVSLHAPNDELRSELVPVNRKIGIEPVLQAADRYFHASGRRLTFEYVLLGGIN 282

Query: 249 DDPEILANLMRTF----VELRIKPYYLHHPDLAAGTSHFRLT----IEEGQKIVASL 297
           D  E    L +      V + + PY     +  AG   +R      I   + I+ S 
Sbjct: 283 DGDEHARQLSQILRGRSVMMNVIPY-----NPVAGLP-YRTPSGAAIARFRAILESA 333


>gi|317056861|ref|YP_004105328.1| MiaB-like tRNA modifying enzyme YliG [Ruminococcus albus 7]
 gi|315449130|gb|ADU22694.1| MiaB-like tRNA modifying enzyme YliG [Ruminococcus albus 7]
          Length = 443

 Score = 40.9 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 20/160 (12%)

Query: 79  GDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           G     P++G  ++   P    +K+   C   C +C    + G  K      +D      
Sbjct: 128 GSKTDLPMEGGRLISTEPFFAYIKIAEGCSNCCTYCAIPAIRG--KFRSRKMEDILEEAK 185

Query: 137 YIQEKSQIWEVIFT------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
           ++ E      V+        G D  +     L ++LK L  I   + +R         P+
Sbjct: 186 WLAEHGVTELVVIAQDTTRYGED--LYGKSMLPELLKKLCEIDGFKWIR----TLYSYPE 239

Query: 191 RINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISR 229
           RI+ E I  L    K V YI +   H    + E +  ++R
Sbjct: 240 RISDEFIDVLASEEKLVKYIDMPIQH---CNAEILKRMNR 276


>gi|251778072|ref|ZP_04820992.1| putative thiazole biosynthesis protein [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243082387|gb|EES48277.1| putative thiazole biosynthesis protein [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 472

 Score = 40.9 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 5/117 (4%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREM 117
              E  IL E   D   +  H   K I  + Y +RI+    L L + C   C +C     
Sbjct: 49  SHREAAILLECDLDEEIEKIHDLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCTYCPYHHQ 108

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
                   L+ ++ +  +  +Q+       + TG DP+    + + + +KT+  IKH
Sbjct: 109 NKHISRKKLTQEEIKREVIALQDMGHKRLALETGEDPINNPIEYVLESIKTIYSIKH 165


>gi|183220785|ref|YP_001838781.1| putative MiaB-like tRNA modifying enzyme [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
 gi|189910885|ref|YP_001962440.1| 2-methylthioadenine synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|238066359|sp|B0SGD8|RIMO_LEPBA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|238066364|sp|B0SPT9|RIMO_LEPBP RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|167775561|gb|ABZ93862.1| 2-methylthioadenine synthetase [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167779207|gb|ABZ97505.1| Putative MiaB-like tRNA modifying enzyme [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 448

 Score = 40.9 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 17/161 (10%)

Query: 49  PHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108
            ++    I R+  P   E   L E  ED +     S  KGI +       +K+   C   
Sbjct: 115 KYDKAGEILRKNFPL--EFKDLTEFNEDLLERLTTS--KGIENYSKPYSYVKISDGCNRG 170

Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQK 164
           C FC    + G  + T  +    +  LA      +I     + +F G D       +L  
Sbjct: 171 CHFCIIPNLRGKYRDTDSNDVLEQTKLAVKAGSKEICLVSQDTVFYGKD-----TDKLMD 225

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +++++  ++ ++ILR       + P +   +L+   +E  K
Sbjct: 226 LVRSVAAVEGLEILRL----LYLYPDKKTEKLLDLYREIPK 262


>gi|160915016|ref|ZP_02077229.1| hypothetical protein EUBDOL_01023 [Eubacterium dolichum DSM 3991]
 gi|158432815|gb|EDP11104.1| hypothetical protein EUBDOL_01023 [Eubacterium dolichum DSM 3991]
          Length = 435

 Score = 40.9 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 52/125 (41%), Gaps = 12/125 (9%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
           +  R  LK+   C  +C +C      G+++   L+      +   +     + E++ TG 
Sbjct: 141 HQTRAFLKIQDGCNQFCSYCIIPYARGAER--SLAEDQVIESAKQLVNNQHL-EIVLTGI 197

Query: 152 --GDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
             G     + + L  +LK L   +  ++ +R  S    ++   I+ ELI  +KE  + + 
Sbjct: 198 HTGRYGNGTGRNLLDLLKRLVAEVPKLRRIRISS----IEMNEISDELIAFMKEEPR-IA 252

Query: 209 IAIHA 213
             +H 
Sbjct: 253 RHLHI 257


>gi|39997663|ref|NP_953614.1| MiaB-like tRNA modifying enzyme [Geobacter sulfurreducens PCA]
 gi|39984555|gb|AAR35941.1| MiaB-like tRNA modifying enzyme [Geobacter sulfurreducens PCA]
 gi|298506603|gb|ADI85326.1| MiaB-like tRNA-modifying enzyme [Geobacter sulfurreducens KN400]
          Length = 434

 Score = 40.9 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 42/127 (33%), Gaps = 17/127 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  L++ + C  +C +C      G  +      +D    +          EV+ T   
Sbjct: 140 HTRAFLQVQNGCDAFCSYCIVPHARGRSRSVPF--RDVLEGIGTF-AYQGFREVVLTGIH 196

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
               G D  +     L  +L+       V  LR  S    V+P  I+  LI  +  +   
Sbjct: 197 LGAYGAD--LEPPASLLDLLEAADAEALVPRLRVGS----VEPHEISDGLIALMARSPV- 249

Query: 207 VYIAIHA 213
           +   +H 
Sbjct: 250 ICPHLHI 256


>gi|32477801|ref|NP_870795.1| Fe-S-oxidoreductase [Rhodopirellula baltica SH 1]
 gi|81658686|sp|Q7UHU7|RLMN_RHOBA RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|32448358|emb|CAD77872.1| conserved hypothetical protein-putative Fe-S-oxidoreductase
           [Rhodopirellula baltica SH 1]
          Length = 371

 Score = 40.9 bits (95), Expect = 0.34,   Method: Composition-based stats.
 Identities = 51/237 (21%), Positives = 77/237 (32%), Gaps = 52/237 (21%)

Query: 94  PDRILLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIF 149
           P R +     V C + C FC     +      +   +  E  L     +    ++  ++ 
Sbjct: 122 PRRSICVSSQVGCAMGCVFCASG--LDGVDRNLTGGEILEQMLRLQQRLPADERLSHIVM 179

Query: 150 TG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELIQCLKE 202
            G G+PL      L  VL  L   +    L          P+RI       P  I  L  
Sbjct: 180 MGMGEPL----ANLPGVLSALDVARSEDGLGI-------SPRRITISTVGLPPAIDKLAA 228

Query: 203 AGKP--VYIAIH------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
           AG P  + +++H             N          AA      +G  L  + VLL GIN
Sbjct: 229 AGIPYNLAVSLHAPNDELRSELVPVNRKIGIEPVLQAADRYFHASGRRLTFEYVLLGGIN 288

Query: 249 DDPEILANLMRTF----VELRIKPYYLHHPDLAAGTSHFRLT----IEEGQKIVASL 297
           D  E    L +      V + + PY     +  AG   +R      I   + I+ S 
Sbjct: 289 DGDEHARQLSQILRGRSVMMNVIPY-----NPVAGLP-YRTPSGAAIARFRAILESA 339


>gi|329960232|ref|ZP_08298674.1| tRNA methylthiotransferase YqeV [Bacteroides fluxus YIT 12057]
 gi|328532905|gb|EGF59682.1| tRNA methylthiotransferase YqeV [Bacteroides fluxus YIT 12057]
          Length = 439

 Score = 40.9 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 14/151 (9%)

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           HS           R  LK+   C  YC +C        +      +   E A        
Sbjct: 137 HSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTI-PFARGRSRNGSIASLVEQARQ--AAAE 193

Query: 143 QIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
              E++ TG   GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ 
Sbjct: 194 GGREIVLTGVNIGDFGKTTGETFFDLVKALDEVEGIERYRISS----IEPNLLTEEIIEF 249

Query: 200 LKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
           +  + +      H + P    S+E +  + R
Sbjct: 250 VSRSKR---FMPHFHIPLQSGSDEVLKLMRR 277


>gi|325525113|gb|EGD03003.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. TJI49]
          Length = 355

 Score = 40.9 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F ++        +L+ ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTHEEIERVARIFVAH-GVEKIRITGGE 99

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K L+ +++ L  +
Sbjct: 100 PLL--RKNLEFLIERLARL 116


>gi|228469810|ref|ZP_04054768.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
 gi|228308649|gb|EEK17400.1| conserved hypothetical protein [Porphyromonas uenonis 60-3]
          Length = 449

 Score = 40.9 bits (95), Expect = 0.35,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 15/124 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
             R  LK+   C  YC +C      G S+ G++ S       +A +       E+I TG 
Sbjct: 160 RTRHFLKVQDGCNYYCTYCTIPAARGVSRNGSIASLVAQAERVAELGG----REIILTGV 215

Query: 152 --GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
             GD    + + L ++L  L  +  +   R  S    ++P+ + PE+IQ + E  +    
Sbjct: 216 NIGDFGRSTGETLLELLHRLTQVAGIARYRIGS----IEPELLTPEIIQFVAETAQ---F 268

Query: 210 AIHA 213
             H 
Sbjct: 269 MPHF 272


>gi|283785773|ref|YP_003365638.1| hypothetical protein ROD_20861 [Citrobacter rodentium ICC168]
 gi|282949227|emb|CBG88837.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
          Length = 436

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 28/161 (17%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           RY    L++    C   C FC           T       E  +A I        + F  
Sbjct: 150 RYAPLALVQYSRGCRFACDFCSIHAFYPDGVRTRP----VEQIMAEIDALPGDRFIAFV- 204

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
            D L  S K+L+ +L+ L  I  ++  R+  ++  +D  R +  L+  L +AG    +  
Sbjct: 205 DDNLFASRKKLESLLEAL--IP-LKR-RWGCQI-SIDVAR-DEALLDRLAQAGCGFVLMG 258

Query: 212 --------------HANHPYEFSEEAIAAISRLANAGIILL 238
                           NH    + +    I  L   GI + 
Sbjct: 259 FESLNPANLRQMGKQWNHA---AGDYRRVIRALHARGICVY 296


>gi|29832258|ref|NP_826892.1| hypothetical protein SAV_5715 [Streptomyces avermitilis MA-4680]
 gi|29609377|dbj|BAC73427.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 723

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 16/126 (12%)

Query: 97  ILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIWEVI 148
           ++LK+   C + C  C+     +     +  +++ +  +     +   +     +   VI
Sbjct: 13  LVLKIHSRCNLACDHCYVYEHEDQSWQARPVLIAEETLDKVAHRLAAYTVDRKLESVSVI 72

Query: 149 FTGGDPLILSHKRLQKVLKTLRYI-KHVQI--LRFHSRVPIVDPQRINPELIQCLKEAGK 205
             GG+PL++   RL+ +   LR +   +    LR H+        R+N   ++ LKE   
Sbjct: 73  LHGGEPLLVGPTRLRNICAQLRSVLDPLTTLDLRIHTNGV-----RLNRAHLEILKEFDV 127

Query: 206 PVYIAI 211
            V I++
Sbjct: 128 KVGISL 133


>gi|332300583|ref|YP_004442504.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Porphyromonas asaccharolytica DSM 20707]
 gi|332177646|gb|AEE13336.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Porphyromonas asaccharolytica DSM 20707]
          Length = 157

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C  +C  C   E      GT L+    +  +  I     +  +  +GGDP + S + L 
Sbjct: 25  GCSHHCPGCHNPESHNPLVGTPLTEAYLQQIIDDINNNPLLDGITLSGGDP-MFSPEELL 83

Query: 164 KVLKTLRY 171
            +LK L+ 
Sbjct: 84  TLLKRLKS 91


>gi|319650007|ref|ZP_08004156.1| molybdenum cofactor biosynthesis protein A [Bacillus sp.
           2_A_57_CT2]
 gi|317398188|gb|EFV78877.1| molybdenum cofactor biosynthesis protein A [Bacillus sp.
           2_A_57_CT2]
          Length = 338

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 32/171 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C++C   E+ G       K  +LS ++ E  LA I     + ++  TGG+
Sbjct: 19  ISVIDRCNFRCQYCMPAEVFGPDFAFLPKNELLSYEEIER-LAKIFVSLGVEKIRLTGGE 77

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+     + K++K L  I+ ++ +   +   ++ P+         LKEAG  V + I  
Sbjct: 78  PLMRKD--MPKLVKMLSDIEGLKDIGLTTNG-VLLPKHAKD-----LKEAGL-VRVNISL 128

Query: 214 NHPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDD 250
                  +E               +  I     AG+ +    V+ KG+ND 
Sbjct: 129 ---DSLDDELFGKINGRNVGVKPVLKGIEAAKEAGLGVKLNMVVKKGLNDS 176


>gi|255280937|ref|ZP_05345492.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bryantella formatexigens
           DSM 14469]
 gi|255268385|gb|EET61590.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bryantella formatexigens
           DSM 14469]
          Length = 518

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 52/127 (40%), Gaps = 22/127 (17%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +  +YP +  + ++  C  +C +C    + G ++      ++    +  +     + EV+
Sbjct: 221 VERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--REILREIERLAAD-GVVEVM 277

Query: 149 FTGGD----------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
             G +          P+        ++L+ +  I  ++ +RF +      P+ ++ ELI+
Sbjct: 278 LLGQNVNSYGKNLPEPMSF-----AQLLREVEKIDGIKRIRFMTSH----PKDLSDELIE 328

Query: 199 CLKEAGK 205
            +  + K
Sbjct: 329 VMASSEK 335


>gi|53713716|ref|YP_099708.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
 gi|60681987|ref|YP_212131.1| putative oxidoreductase [Bacteroides fragilis NCTC 9343]
 gi|81314949|sp|Q5LCF8|RIMO_BACFN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|81382384|sp|Q64TK5|RIMO_BACFR RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|52216581|dbj|BAD49174.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
 gi|60493421|emb|CAH08207.1| putative oxidoreductase [Bacteroides fragilis NCTC 9343]
          Length = 432

 Score = 40.5 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G      +  ++    + Y+             E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPI--EEILDEVRYLVSNGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G D  +   + L ++++ +  I  V+ +R H       P     EL + ++E 
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPEELFRVMRER 242


>gi|322806790|emb|CBZ04359.1| fe-S oxidoreductase, related to NifB/MoaA family with PDZ
           N-terminal domain [Clostridium botulinum H04402 065]
          Length = 444

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L +   C   C FCF  ++    + T+    D ++ L+++Q       +  T      
Sbjct: 79  AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
           +  + + +++     I  +  +  H+     +P+ R+  +L+                  
Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
              F+      + +LA  GI +  Q VL  G+N + E L   +     L
Sbjct: 163 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209


>gi|229825163|ref|ZP_04451232.1| hypothetical protein GCWU000182_00514 [Abiotrophia defectiva ATCC
           49176]
 gi|229790535|gb|EEP26649.1| hypothetical protein GCWU000182_00514 [Abiotrophia defectiva ATCC
           49176]
          Length = 479

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 10/98 (10%)

Query: 92  RYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQI 144
           ++ + ++    L + H C + CR+CF  E        ++S +  +AA  ++       + 
Sbjct: 101 KHRNTVVKALCLNIAHDCNLACRYCFAGEGEYQGDRGMMSYEVGKAAFDFLIKNSGHRKN 160

Query: 145 WEVIFTGGDPLI--LSHKRLQKVLKTLRYIKHVQILRF 180
            EV F GG+PL+   + K L    + L  I H +  RF
Sbjct: 161 LEVDFFGGEPLMNWNTVKMLVAYGRELEKI-HDKNFRF 197


>gi|226949876|ref|YP_002804967.1| hypothetical protein CLM_2825 [Clostridium botulinum A2 str. Kyoto]
 gi|226844173|gb|ACO86839.1| conserved hypothetical protein [Clostridium botulinum A2 str.
           Kyoto]
          Length = 454

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L +   C   C FCF  ++    + T+    D ++ L+++Q       +  T      
Sbjct: 89  AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 138

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
           +  + + +++     I  +  +  H+     +P+ R+  +L+                  
Sbjct: 139 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 172

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
              F+      + +LA  GI +  Q VL  G+N + E L   +     L
Sbjct: 173 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 219


>gi|182701775|ref|ZP_02615257.2| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
 gi|182668614|gb|EDT80593.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916]
          Length = 454

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L +   C   C FCF  ++    + T+    D ++ L+++Q       +  T      
Sbjct: 89  AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 138

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
           +  + + +++     I  +  +  H+     +P+ R+  +L+                  
Sbjct: 139 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 172

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
              F+      + +LA  GI +  Q VL  G+N + E L   +     L
Sbjct: 173 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 219


>gi|170760297|ref|YP_001787837.1| hypothetical protein CLK_1904 [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169407286|gb|ACA55697.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 444

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L +   C   C FCF  ++    + T+    D ++ L+++Q       +  T      
Sbjct: 79  AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
           +  + + +++     I  +  +  H+     +P+ R+  +L+                  
Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
              F+      + +LA  GI +  Q VL  G+N + E L   +     L
Sbjct: 163 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209


>gi|153939159|ref|YP_001391818.1| hypothetical protein CLI_2583 [Clostridium botulinum F str.
           Langeland]
 gi|152935055|gb|ABS40553.1| conserved hypothetical protein [Clostridium botulinum F str.
           Langeland]
 gi|295319843|gb|ADG00221.1| conserved hypothetical protein [Clostridium botulinum F str.
           230613]
          Length = 444

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L +   C   C FCF  ++    + T+    D ++ L+++Q       +  T      
Sbjct: 79  AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
           +  + + +++     I  +  +  H+     +P+ R+  +L+                  
Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
              F+      + +LA  GI +  Q VL  G+N + E L   +     L
Sbjct: 163 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209


>gi|148380477|ref|YP_001255018.1| hypothetical protein CBO2520 [Clostridium botulinum A str. ATCC
           3502]
 gi|153931168|ref|YP_001384701.1| hypothetical protein CLB_2397 [Clostridium botulinum A str. ATCC
           19397]
 gi|153937400|ref|YP_001388222.1| hypothetical protein CLC_2379 [Clostridium botulinum A str. Hall]
 gi|148289961|emb|CAL84074.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152927212|gb|ABS32712.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           19397]
 gi|152933314|gb|ABS38813.1| conserved hypothetical protein [Clostridium botulinum A str. Hall]
          Length = 444

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L +   C   C FCF  ++    + T+    D ++ L+++Q       +  T      
Sbjct: 79  AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
           +  + + +++     I  +  +  H+     +P+ R+  +L+                  
Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
              F+      + +LA  GI +  Q VL  G+N + E L   +     L
Sbjct: 163 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209


>gi|24211989|sp|Q8Y0K4|MOAA_RALSO RecName: Full=Molybdenum cofactor biosynthesis protein A
          Length = 345

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F ++    Q   +LS ++ E  +    E   + ++  TGG+
Sbjct: 20  ISVTDRCNFRCIYCMPKDVFDKDYRFLQHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 78

Query: 154 PLILSH-KRLQKVLKTL 169
           PL+    +RL ++L  L
Sbjct: 79  PLLRKDIERLVEMLARL 95


>gi|317125950|ref|YP_004100062.1| radical SAM protein [Intrasporangium calvum DSM 43043]
 gi|315590038|gb|ADU49335.1| Radical SAM domain protein [Intrasporangium calvum DSM 43043]
          Length = 406

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 38/184 (20%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGG 152
           P  +  ++   C + C+ C    M G+  G  L+ +     +  +    + + ++  TGG
Sbjct: 18  PMLVFWEVTRACQLACKHCRANAMAGALPGE-LNHEQGLDLIDQVAAFGRPYPILVLTGG 76

Query: 153 DPLILSHKRLQKVLK--TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           D L+     + ++++    R I            P V PQ + PE I  + ++G      
Sbjct: 77  DCLLRPD--IWELVEASRARGIPTAL-------SPSVTPQ-LTPETIARMVDSGINAVSI 126

Query: 209 ---------------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
                          I  H         + I AI  L++AG+ +   + ++K   D+   
Sbjct: 127 SLDGACAATHDGVRGIPGHF-------ADTIPAIRALSDAGLTVQINTTVMKSNLDELAD 179

Query: 254 LANL 257
           +A L
Sbjct: 180 VAKL 183


>gi|18976462|ref|NP_577819.1| molybdenum cofactor biosynthesis protein A [Pyrococcus furiosus DSM
           3638]
 gi|24211985|sp|Q8U4J5|MOAA_PYRFU RecName: Full=Probable molybdenum cofactor biosynthesis protein A
 gi|18892001|gb|AAL80214.1| molybdenum cofactor biosynthesis protein [Pyrococcus furiosus DSM
           3638]
          Length = 307

 Score = 40.5 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 44/172 (25%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + L   C + C +C R           ++ ++ E  +  I  +  I  V  TGG+P +  
Sbjct: 15  ISLTKECNLNCFYCHREGQ--QDGERTMTPEEIERIVR-IASRLGIRNVKLTGGEPTVRP 71

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL----------IQCLKEAGKPVY 208
                     +  I  +Q +R         P  ++  +           + LKEAG    
Sbjct: 72  D---------IYEI--IQRIR---------PYVVDLSMTTNGTTLYASAEKLKEAGLD-R 110

Query: 209 IAIHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           + I  +                ++ +  I R  N    +    V+++GINDD
Sbjct: 111 VNISLDTLDRKKYKMITGYDVLDQVLKGIRRATNLFYPVKLNMVVMRGINDD 162


>gi|332158286|ref|YP_004423565.1| molybdenum cofactor biosynthesis protein A [Pyrococcus sp. NA2]
 gi|331033749|gb|AEC51561.1| molybdenum cofactor biosynthesis protein A [Pyrococcus sp. NA2]
          Length = 306

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 32/166 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + L   C + C +C R      +    +++ + E  +  I  +  I +V  TGG+P I  
Sbjct: 15  ISLTKECNLSCFYCHREGQ--GEGEREMTADEIERIVK-IASRLGIRKVKLTGGEPTIRK 71

Query: 159 HKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAG------------- 204
                 +++ +R I  +V  L   +    +        L + LKEAG             
Sbjct: 72  D-----IIEIVRKIRPYVVDLSLTTNGTTLY------SLAEKLKEAGLDRVNISLDTLDR 120

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           K   +    +      ++ +  I +       +    V+++GINDD
Sbjct: 121 KKYKMITGFD----VLDQVLKGIRKATKLFYPVKLNMVVMRGINDD 162


>gi|295702571|ref|YP_003595646.1| hypothetical protein BMD_0385 [Bacillus megaterium DSM 319]
 gi|294800230|gb|ADF37296.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 372

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 31  VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPLDLILKRLDEI---PTLRALSITGGEP-M 86

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           +S   ++  +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 87  MSLSSVKNYVVPLLKYAHERGVR----------TQINSNLTLDLARYEQIIPYLDVLHIS 136

Query: 215 H 215
           H
Sbjct: 137 H 137


>gi|253565664|ref|ZP_04843119.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|265764040|ref|ZP_06092608.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
 gi|251945943|gb|EES86350.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|263256648|gb|EEZ27994.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
          Length = 432

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G      +  ++    + Y+             E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPI--EEILDEVRYLVSNGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G D  +   + L ++++ +  I  V+ +R H       P     EL + ++E 
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPEELFRVMRER 242


>gi|85859749|ref|YP_461951.1| radical SAM protein [Syntrophus aciditrophicus SB]
 gi|123752486|sp|Q2LUM5|RLMN_SYNAS RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|85722840|gb|ABC77783.1| radical SAM family enzyme [Syntrophus aciditrophicus SB]
          Length = 348

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 68/191 (35%), Gaps = 28/191 (14%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG-G 152
              +     C + CRFCF     G ++    S           Y+ E  +I  ++  G G
Sbjct: 105 TACISTQVGCHMGCRFCFTARQ-GFRRNLKPSEITGQLTMLQFYLPEGPEIKNIVMMGMG 163

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-- 210
           +PL      L+ +    R I     L F +R   +    I P     +++ G+ + I   
Sbjct: 164 EPLANYRNTLKAI----RIITSDYGLGFSTRKITLSTSGITP----MIEQLGRDLCINLA 215

Query: 211 IHANHP-----YEFSEEAIAA-ISRLANA-------GIILLS-QSVLLKGINDDPEILAN 256
           I  N P      E         + RL  A       G  +L+ + +L+ G+N  P     
Sbjct: 216 ISLNAPTDSIRSELMPVNRKYPLDRLLQACRNYPMPGRRMLTFEYILIDGVNSSPAHAEM 275

Query: 257 LMRTFVELRIK 267
           L R    +R K
Sbjct: 276 LCRLLKGIRCK 286


>gi|294497200|ref|YP_003560900.1| hypothetical protein BMQ_0384 [Bacillus megaterium QM B1551]
 gi|294347137|gb|ADE67466.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
          Length = 372

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 31  VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPLDLILKRLDEI---PTLRALSITGGEP-M 86

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           +S   ++  +  L    H + +R           +IN  L   L    +  P    +H +
Sbjct: 87  MSLSSVKNYVVPLLKYAHERGVR----------TQINSNLTLDLARYEQIIPYLDVLHIS 136

Query: 215 H 215
           H
Sbjct: 137 H 137


>gi|111225093|ref|YP_715887.1| hypothetical protein FRAAL5734 [Frankia alni ACN14a]
 gi|122953811|sp|Q0RDV0|RIMO_FRAAA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|111152625|emb|CAJ64366.1| Conserved hypothetical protein [Frankia alni ACN14a]
          Length = 545

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 47/139 (33%), Gaps = 16/139 (11%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
             LK+   C   C FC    FR   V      VL+  +  A     +           G 
Sbjct: 189 AALKISSGCDRRCAFCAIPSFRGSHVSRPADDVLAEAEWLAGEGARELVLVSENSTSYGK 248

Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ-CLKEAGKPVYIA 210
           D   L   + L+K+L  L  +  +  +R       + P  + P L++  L   G   Y+ 
Sbjct: 249 D---LGDLRALEKLLPQLAAVPGIVRVR----TVYLQPAELRPSLLEVLLTTPGLAPYLD 301

Query: 211 IHANHPYEFSEEAIAAISR 229
           +   H    S   +  + R
Sbjct: 302 LSFQHA---SPAVLRRMRR 317


>gi|301057214|ref|ZP_07198343.1| radical SAM domain protein [delta proteobacterium NaphS2]
 gi|300448665|gb|EFK12301.1| radical SAM domain protein [delta proteobacterium NaphS2]
          Length = 341

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 69/191 (36%), Gaps = 26/191 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
            +L   C + C  C      GS++G      DT+  L  +Q+  Q+    VI TGG+PL 
Sbjct: 3   WELTRKCNLNCVHC----RAGSERGPYPGELDTKKCLEILQQIQQVGNPIVILTGGEPL- 57

Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
                L++ +  L        LR    +   ++ PQRI       +K     +  A    
Sbjct: 58  -----LREDIFDLAKAGTEMGLRMVMATNGTLMTPQRIAQMKASGIKRLSISIDGATAEQ 112

Query: 215 HP--YEFSEEAIAAISRLANAGIILLSQSVLLKGIND-----DPEILANLMRTFVELRIK 267
           H    +       A+      GI LL++  L   IN      +   L  ++   V+L   
Sbjct: 113 HDAFRKVPGAFERAME-----GIGLLNEHGLEFQINTTVSRHNVNELEKILNLTVKLGAV 167

Query: 268 PYYLHHPDLAA 278
            +++       
Sbjct: 168 AHHIFLLVPTG 178


>gi|255009413|ref|ZP_05281539.1| putative oxidoreductase [Bacteroides fragilis 3_1_12]
 gi|313147172|ref|ZP_07809365.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313135939|gb|EFR53299.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 432

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 14/113 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  +      ++    + Y+             E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVRYLVSNGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G D  +   + L ++++ +  I  V+ +R H       P     +L + ++E 
Sbjct: 196 GVD--LYKKQMLPELIERVSEIPGVEWIRLH----YAYPAHFPEDLFRVMRER 242


>gi|168187871|ref|ZP_02622506.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
 gi|169294276|gb|EDS76409.1| conserved hypothetical protein [Clostridium botulinum C str.
           Eklund]
          Length = 433

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 37/127 (29%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C           +       +     +       EVI +G D
Sbjct: 141 KTRAFLKIQDGCNNFCSYCLI-PFARGAVCSKNPKIVIDEVKK-LAAH-GFKEVILSGID 197

Query: 154 PLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--QCLKEAGKP 206
                        L  +LK +  I  +  +R  S         I PE      +++ G  
Sbjct: 198 ISSYGVDLEGDWNLLNILKEIDKIDGITRVRIGS---------IGPEFFNEDRIRQIGNL 248

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 249 KKLCPHF 255


>gi|256811095|ref|YP_003128464.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
 gi|256794295|gb|ACV24964.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
          Length = 426

 Score = 40.5 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 47/124 (37%), Gaps = 15/124 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPL- 155
           +++   CP  C FC    + G      +  +  E    Y  I  +  + ++ F   +   
Sbjct: 177 IEITRGCPYSCYFCQTPRIFGKN----VRHRSIENICKYVEIMAERNLKDIRFITPNAFG 232

Query: 156 -------ILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                   L+  +++K+L+ +R I      + F +    V P+ +N E +  + +     
Sbjct: 233 YGSKDGKTLNIDKIEKLLENIREILGKDGRIFFGTFPSEVRPEHVNDETVDLILKYADNK 292

Query: 208 YIAI 211
            + I
Sbjct: 293 NLVI 296


>gi|229082873|ref|ZP_04215297.1| antilisterial bacteriocin (subtilosin) production [Bacillus cereus
           Rock4-2]
 gi|228700411|gb|EEL52973.1| antilisterial bacteriocin (subtilosin) production [Bacillus cereus
           Rock4-2]
          Length = 462

 Score = 40.5 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 79  GDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
            +  + P+  I  +  YP    +++ + C V CR C+     G+ K  V+S    ++ L 
Sbjct: 106 EEPINVPVNLIEEQTIYPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSLDQIKSLLD 163

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
            +     +  +  TGGD  +  +  L+++L
Sbjct: 164 DL-NNIGVKLIELTGGDITVHPN--LKEIL 190


>gi|221642191|ref|YP_002533278.1| ywiA protein [Bacillus cereus Q1]
 gi|221243126|gb|ACM15835.1| ywiA protein [Bacillus cereus Q1]
          Length = 462

 Score = 40.5 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 79  GDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
            +  + P+  I  +  YP    +++ + C V CR C+     G+ K  V+S    ++ L 
Sbjct: 106 EEPINVPVNLIEEQTIYPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSLDQIKSLLD 163

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
            +     +  +  TGGD  +  +  L+++L
Sbjct: 164 DL-NNIGVKLIELTGGDITVHPN--LKEIL 190


>gi|170696802|ref|ZP_02887909.1| molybdenum cofactor biosynthesis protein A [Burkholderia graminis
           C4D1M]
 gi|170138291|gb|EDT06512.1| molybdenum cofactor biosynthesis protein A [Burkholderia graminis
           C4D1M]
          Length = 369

 Score = 40.5 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R +            +L+ ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRAVFDKDYAFLPHSALLTFEEIERLARLFVAH-GVEKIRLTGGE 99

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K L+ +++ L  +
Sbjct: 100 PLL--RKNLEFLIERLAQL 116


>gi|206973072|ref|ZP_03233994.1| radical SAM domain protein [Bacillus cereus AH1134]
 gi|206731956|gb|EDZ49156.1| radical SAM domain protein [Bacillus cereus AH1134]
 gi|262358192|gb|ACY56718.1| ThnB [Bacillus thuringiensis]
          Length = 459

 Score = 40.5 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 7/90 (7%)

Query: 79  GDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
            +  + P+  I  +  YP    +++ + C V CR C+     G+ K  V+S    ++ L 
Sbjct: 103 EEPINVPVNLIEEQTIYPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSLDQIKSLLD 160

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
            +     +  +  TGGD  +  +  L+++L
Sbjct: 161 DL-NNIGVKLIELTGGDITVHPN--LKEIL 187


>gi|114766591|ref|ZP_01445547.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pelagibaca bermudensis
           HTCC2601]
 gi|114541207|gb|EAU44259.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. HTCC2601]
          Length = 435

 Score = 40.5 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 5/104 (4%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
              L +   C  +C FC      G++  +  + +    A   ++   +   ++    +  
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRVLTEARDLVERGVRELTLLGQNVNAY 208

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
               + L  +++ L  I  ++ +RF +  P      ++ +LI  
Sbjct: 209 HGHDRGLAGLIRELAKIDGLERIRFTTSHPND----MDDDLIAA 248


>gi|194466736|ref|ZP_03072723.1| molybdenum cofactor biosynthesis protein A [Lactobacillus reuteri
           100-23]
 gi|194453772|gb|EDX42669.1| molybdenum cofactor biosynthesis protein A [Lactobacillus reuteri
           100-23]
          Length = 332

 Score = 40.5 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 4/89 (4%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            R  D + L +   C + C +C     +    +  ++S  +    +        + +V  
Sbjct: 9   QRKIDYLRLSITDRCNLRCVYCMPAAGLDFFSQDKIMSQDEIVRLVQNFAR-LGVTKVRL 67

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           TGG+PL+     L  ++  +R I  +  +
Sbjct: 68  TGGEPLLRRD--LATIIYRIRQIPEITDI 94


>gi|330838563|ref|YP_004413143.1| molybdenum cofactor biosynthesis protein A [Selenomonas sputigena
           ATCC 35185]
 gi|329746327|gb|AEB99683.1| molybdenum cofactor biosynthesis protein A [Selenomonas sputigena
           ATCC 35185]
          Length = 328

 Score = 40.5 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 28/171 (16%), Positives = 66/171 (38%), Gaps = 23/171 (13%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            R  + + + +   C + CR+C   + V       +LS ++    +  + +   I +V  
Sbjct: 6   RRKIEYVRISVTDRCNLRCRYCMPADGVEKLSHADILSFEEIVRVVRALAQ-LGIRKVRL 64

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           TGG+PL+   + +  +++ ++ ++ ++ +   +         +  +L + L+ AG    +
Sbjct: 65  TGGEPLL--RRGVVDLVREIKAVEGIERVALTTNGV------LLADLAEELRAAGLD-GV 115

Query: 210 AIHANHPYE------------FSEEAIAAISRLANAGIILLSQSVLLKGIN 248
            I  +   E                    +     AG+      V LKG+N
Sbjct: 116 NISLDTLAEDAFYDITRRSASLLSVVRQGMEAALAAGLKTKLNCVPLKGVN 166


>gi|315650922|ref|ZP_07903963.1| molybdenum cofactor biosynthesis protein A [Eubacterium saburreum
           DSM 3986]
 gi|315486836|gb|EFU77177.1| molybdenum cofactor biosynthesis protein A [Eubacterium saburreum
           DSM 3986]
          Length = 323

 Score = 40.5 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 21/168 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R  D + + + + C   C +C           T+   +  + A A    K  I +   TG
Sbjct: 7   RKIDYMRISVTNRCNFRCTYC--MPETKKVDDTLSLDEIYQVAFA--ASKCGITKFKITG 62

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+PL+     +   ++ L  I  V+ +   +    +          + L +AG       
Sbjct: 63  GEPLV--RDGIVDFIRRLHDIDSVKDITMTTNGFYLYKY------AKSLADAGLSSVNIS 114

Query: 212 HANHPYE----FSE-----EAIAAISRLANAGIILLSQSVLLKGINDD 250
             +   E     +      + +  I+    AG+     +VL +G+N+D
Sbjct: 115 LDSLKKERFIKITGVDALSDVVKGINEAKRAGLSTKINTVLQRGVNED 162


>gi|87119366|ref|ZP_01075264.1| hypothetical protein MED121_13890 [Marinomonas sp. MED121]
 gi|86165757|gb|EAQ67024.1| hypothetical protein MED121_13890 [Marinomonas sp. MED121]
          Length = 438

 Score = 40.5 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 15/123 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             + ++  C  YC FC      G +     +    E        +  + E+   G +   
Sbjct: 135 AFVSIMEGCSKYCTFCVVPYTRGEEVSRPFTDILVEVMQ---LAEQGVREIHLLGQNVNA 191

Query: 157 L-------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
                   +   L  V+  +  I  V+ +RF +  P+         LI+  +   K +  
Sbjct: 192 YRGVDNEGTESDLADVISAIAQIDGVERIRFTTSHPV----EFTDSLIEAFRNIPK-LVS 246

Query: 210 AIH 212
            +H
Sbjct: 247 HLH 249


>gi|320161621|ref|YP_004174846.1| hypothetical protein ANT_22200 [Anaerolinea thermophila UNI-1]
 gi|319995475|dbj|BAJ64246.1| hypothetical protein ANT_22200 [Anaerolinea thermophila UNI-1]
          Length = 798

 Score = 40.5 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 9/114 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   CP+ C  C+ R   G       + K  E A      ++     + TGG+PL+  
Sbjct: 451 LHITFECPLRCNHCYARG--GRHSPAFPAEKAIELAQQ--ASRAGFRHFVITGGEPLVHP 506

Query: 159 HKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
              +  +L+ L  ++  +  +R   R  +V P  ++ E ++ L  A   V +++
Sbjct: 507 --EIFPLLEHLEGLQQDLSPMRIVLRTSLVSP--LSDEPMRLLANAPHEVVVSL 556



 Score = 40.1 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 54/150 (36%), Gaps = 15/150 (10%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGGDPLI 156
           ++     CP  C++CF       QK   ++ +  E   +++ E+     E+ F GG+PL 
Sbjct: 8   MIVPSSGCPASCQYCFGPH----QKDKTMNKQVLERTASWLGEEKASTLEITFHGGEPLT 63

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI----H 212
              K  +     L+     + +RF+ +  +     +N  LI    E    +  ++    H
Sbjct: 64  AGVKFFRNAFDVLQNQNPEKNIRFNLQSNLWL---LNDALIDLFAEHRVSMGTSLDGPEH 120

Query: 213 ANHPYEFSEEAIA---AISRLANAGIILLS 239
            N               I +    G+ +  
Sbjct: 121 INDAQRGKGYFRRTMLGIEKARRKGLAVGC 150


>gi|307730932|ref|YP_003908156.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
           CCGE1003]
 gi|307585467|gb|ADN58865.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
           CCGE1003]
          Length = 461

 Score = 40.5 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 26/138 (18%)

Query: 91  HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
           H  P R+      + ++  C  YC +C     V         S+  +  L  I       
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192

Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           + EV   G +       L L    +     +++ +  I  ++ +R+ +      P+    
Sbjct: 193 VREVTLLGQNVNAFRGALTLGSSEIADFATLIEYVAEIPGIERIRYTTSH----PKEFTQ 248

Query: 195 ELIQCLKEAGKPVYIAIH 212
            LI    +  K +   +H
Sbjct: 249 RLIDTYAKVPK-LVSHLH 265


>gi|282600941|ref|ZP_05980225.2| 2-methylthioadenine synthetase [Subdoligranulum variabile DSM
           15176]
 gi|282570102|gb|EFB75637.1| 2-methylthioadenine synthetase [Subdoligranulum variabile DSM
           15176]
          Length = 465

 Score = 40.5 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 37/114 (32%), Gaps = 8/114 (7%)

Query: 94  PDRILLKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
             R  +K+   C   C +C   R       +      ++            +I     + 
Sbjct: 174 HTRAFVKVEDGCNRRCAYCVIPRARGPVRSREESSILQELHRLTE--AGYKEIVLTAISL 231

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                 S   L ++++    +  V+ LR  S    +DP  ++ E+I  L    K
Sbjct: 232 PSYGTDSGTSLVELVEKAAAVPGVERLRLGS----LDPDMLHDEVILRLSRVKK 281


>gi|222445702|ref|ZP_03608217.1| hypothetical protein METSMIALI_01343 [Methanobrevibacter smithii
           DSM 2375]
 gi|261349749|ref|ZP_05975166.1| putative molybdenum cofactor biosynthesis protein A
           [Methanobrevibacter smithii DSM 2374]
 gi|222435267|gb|EEE42432.1| hypothetical protein METSMIALI_01343 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861704|gb|EFC94002.1| putative molybdenum cofactor biosynthesis protein A
           [Methanobrevibacter smithii DSM 2374]
          Length = 309

 Score = 40.5 bits (94), Expect = 0.39,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 70/189 (37%), Gaps = 27/189 (14%)

Query: 92  RYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +Y   IL   + + + C   C +C             +++ +       I +   + ++ 
Sbjct: 9   KYERPILSLRITITNKCNENCLYC--HHDGMDDSQEEMNADEIYRICE-IAKNIGVRKIR 65

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-V 207
            +GG+PLI     + +++  +  +    I        I     +  +  + LKEAG   V
Sbjct: 66  ISGGEPLIRKD--IVEIVSKIASLDFDDI-------SITSNGTLLGKYAKDLKEAGLNRV 116

Query: 208 YIAIHANHP--------YEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258
            I++   +P            E A   I +    G+  +    VL+KGIN++   + ++ 
Sbjct: 117 NISLDTLNPETYKKVTTKNLLESAKNGILKAVEVGLYPVKINMVLMKGINEN--EVDDMF 174

Query: 259 RTFVELRIK 267
               E  I 
Sbjct: 175 EFCKEHGII 183


>gi|238924259|ref|YP_002937775.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale ATCC 33656]
 gi|238875934|gb|ACR75641.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale ATCC 33656]
          Length = 434

 Score = 40.5 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 32/162 (19%)

Query: 70  LPEEREDPIGDNNHSPLKGIVH----------RYPDRILLKLLHVCPVYCRFCFRREMVG 119
           L E   D + D       G  H          +   R  +K+   C  +C +C      G
Sbjct: 109 LEEYSLDSVNDTVDDINDG-KHDFEELFIDQTKEHTRAFIKVQDGCNQFCSYCIIPYARG 167

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRY 171
             +      ++  A +  +       EV+ TG     LS           L ++++ +  
Sbjct: 168 RVRSRRF--ENVIAEVERLAAN-GFKEVVLTGI---HLSSYGVDFEEAVGLLELIQAVNA 221

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           +K ++ +R  S    ++P+ +       L +  K   I  H 
Sbjct: 222 VKGIERIRLGS----LEPKIVTEHFASELSKLDK---ICPHF 256


>gi|256830160|ref|YP_003158888.1| Radical SAM domain-containing protein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579336|gb|ACU90472.1| Radical SAM domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 399

 Score = 40.5 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 36/212 (16%), Positives = 77/212 (36%), Gaps = 40/212 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
            ++   C + C+ C     +   +G +    DT  A A I    Q+    +IFTGGDP++
Sbjct: 57  WEVTRSCNLACKHCRAEAHLEPYEGEL----DTAEAKALIDTFPQVGNPIIIFTGGDPMM 112

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHS-RVP--IVDPQ--RINPELIQCLKEAGKPVYIAI 211
            +                 +++R+ + +    ++ P    I P+  + ++EAG     +I
Sbjct: 113 RADVY--------------ELIRYATDKGLRCVMSPNGTLITPDTARQMREAGVQ-RCSI 157

Query: 212 HANHPY-EFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
             + P  E  +E              I  L +AGI     + + +      + + +L   
Sbjct: 158 SIDGPDAESHDEFRGVQGAFDASMRGIQYLKDAGIEFQVNTTVTRANLGSFKKIFDLCE- 216

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
              +    +++         +     +  GQ+
Sbjct: 217 --RIGAVAWHIFLLVPTGRAAQLGAEVITGQE 246


>gi|332797245|ref|YP_004458745.1| Fe-S oxidoreductase family [Acidianus hospitalis W1]
 gi|332694980|gb|AEE94447.1| Fe-S oxidoreductase family [Acidianus hospitalis W1]
          Length = 351

 Score = 40.5 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 51/298 (17%), Positives = 104/298 (34%), Gaps = 62/298 (20%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R P  +  ++   CP+ C+ C R   +       L++ + +  L  I    ++  V+FTG
Sbjct: 5   RAPHLVFWEVTKACPLACKHC-RANAIQDPLPGELTTAEGKKLLEEISTFGKV-VVVFTG 62

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIA 210
           GDPL  S   + +++   + +  V  +      P   P  ++N + I+ +KE+G   Y++
Sbjct: 63  GDPL--SRDDIFELMDYAKQLGLVTSI-----APA--PSYKLNEDTIRKIKESGVT-YMS 112

Query: 211 IHANHPYEFSEEAIAAISRL-------------ANAGIILLSQSVLLKGINDDPEILANL 257
           I  +       E    +  L                G+I+   +++ KG       L  +
Sbjct: 113 ISLDGAK---PETHDWLRGLTSYKYAINGIKEGLKQGLIVQVNTLIWKG---SYPELPQI 166

Query: 258 MRTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP-- 314
            +   +L +K + +        G+    +  E  +K+V  L E +S        ++ P  
Sbjct: 167 AKILHDLGVKVWEIFFLIPVGRGSIELDIPKENYKKVVNFLLE-VSKYNIIVRTVEGPFF 225

Query: 315 ------------------------GGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348
                                   G   K+ +D   +            +   +  YP
Sbjct: 226 RRAKLEYPEGFEDNELIEELRKLLGKPPKMDVDKSIVPTRDGSGVIFISYDGEI--YP 281


>gi|291531040|emb|CBK96625.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases
           [Eubacterium siraeum 70/3]
          Length = 480

 Score = 40.5 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 21/143 (14%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS---------SKDTEAALAYIQEKS-QIWEV 147
           L   +  CP  C +C     + +     L           K+ +     ++  S ++  V
Sbjct: 160 LYISIPFCPSRCSYCS---FISASGEGALKLIDDYFGLLLKELDIYADIVKRFSLKVDTV 216

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KP 206
              GG P  LS  +L +++  L     +  +R  +      P  I  + ++ LK  G + 
Sbjct: 217 YIGGGTPTTLSASQLDRLIDKLGEFD-IANIREFT-AEAGRPDTITEDKLRTLKNGGVRR 274

Query: 207 VYIAIHANHPYEFSEEAIAAISR 229
           + I      P   ++  + A+ R
Sbjct: 275 ISIN-----PQSMNDSVLEAVGR 292


>gi|257075637|ref|ZP_05569998.1| molybdenum cofactor biosynthesis protein A [Ferroplasma acidarmanus
           fer1]
          Length = 315

 Score = 40.5 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 30/167 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           ++L  +C  +C FC    M G+++    ++ +  E  +A +     + ++ FTGG+PL+ 
Sbjct: 23  IQLNAICNFHCIFC---HMEGTERSMQYMTPEQIENVVA-VAASHGVNKIKFTGGEPLLR 78

Query: 158 SHKRLQKVLKTLRYI-KHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAI- 211
                  +L+ +R   KH+   +   +   +  P     +L + LKEAG     + +   
Sbjct: 79  ED-----ILEIVRRTRKHITGNISLTTNG-VELP-----KLAKGLKEAGLDRVNISMHAI 127

Query: 212 -----HA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
                H   +    F       I    +AG+  +    VL+K IN+D
Sbjct: 128 DEYNFHFITDTKKNFLPIVKQGIQAARDAGLGPIKINFVLMKNINED 174


>gi|46447392|ref|YP_008757.1| 2-methylthioadenine synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
 gi|81626503|sp|Q6MAB7|MIAB_PARUW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|46401033|emb|CAF24482.1| probable 2-methylthioadenine synthetase [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 450

 Score = 40.5 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 18/126 (14%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
           +  + ++  C  +C +C     V         S+  E  L   +        E+   G +
Sbjct: 159 KAYVSIIRGCDKFCTYC-----VVPYTRGSEVSRAPENILEECRHLVNQGYKEITLLGQN 213

Query: 154 PLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                  +L+       +L  L  I  ++ +RF +  P+     I+ EL++ +++  K +
Sbjct: 214 VNSYGKDKLEWKCLFHDLLYQLDKIPGLERVRFMTSHPVD----ISKELMEAIRDL-KTL 268

Query: 208 YIAIHA 213
              +H 
Sbjct: 269 CEFVHF 274


>gi|325107255|ref|YP_004268323.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Planctomyces brasiliensis
           DSM 5305]
 gi|324967523|gb|ADY58301.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Planctomyces brasiliensis
           DSM 5305]
          Length = 497

 Score = 40.5 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 52/151 (34%), Gaps = 28/151 (18%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           +  DP+ D    P       Y     +++   C  +C +C     V         S++  
Sbjct: 160 QSYDPLRDPEMRPSP-----YQ--AFVRITFGCDKFCTYC-----VVPMTRGPEQSRNPS 207

Query: 133 AALAYIQ--EKSQIWEVIFTGG--DPLILSHK----RLQKVLKTLRYIKHVQILRFHSRV 184
             L   +      + E+   G   +   L+      RL  +L  L  ++ ++ +    + 
Sbjct: 208 EILKETKALADQGVQEITLLGQTVNSYRLTENGKEYRLADLLTMLHEVEGIKRI----KF 263

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
               P+ +  +L+Q +++  K      H  H
Sbjct: 264 VTNYPKDMTNDLLQAVRDYKK----VSHYLH 290


>gi|210622529|ref|ZP_03293222.1| hypothetical protein CLOHIR_01170 [Clostridium hiranonis DSM 13275]
 gi|210154164|gb|EEA85170.1| hypothetical protein CLOHIR_01170 [Clostridium hiranonis DSM 13275]
          Length = 358

 Score = 40.5 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 17/125 (13%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIF 149
           +     +      CP  C FC ++++ G              E  L  I + +++    F
Sbjct: 5   KKRIIPIFVPHQGCPNDCIFCNQKKITGVCTTVTPEIVRDIIEECLPTIDKDAEVEIAFF 64

Query: 150 TGGDPLILSHKRLQKVLKTLRY------IKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
            G          +Q+ L  +        I  V+ +R  +R     P  I  E+++ +K  
Sbjct: 65  GGS--FTAIDMDIQRSLLAVAKEYKDRGI--VKDIRMSTR-----PDCITDEILEMVKSY 115

Query: 204 GKPVY 208
           G  + 
Sbjct: 116 GTTII 120


>gi|158520204|ref|YP_001528074.1| molybdenum cofactor biosynthesis protein A [Desulfococcus
           oleovorans Hxd3]
 gi|158509030|gb|ABW65997.1| molybdenum cofactor biosynthesis protein A [Desulfococcus
           oleovorans Hxd3]
          Length = 330

 Score = 40.5 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 23/163 (14%), Positives = 57/163 (34%), Gaps = 20/163 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C R +         +LS ++    + +I     I ++  TGG+P + 
Sbjct: 19  VSVTDRCNLNCLYCRRWDFSEYFPSSEILSYEEMLRLI-HIGAGLGITKIRITGGEPFVR 77

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI----- 211
                   +  +     +  +   +         +    +  L++AG + + I++     
Sbjct: 78  KDA--CSFIDRVAAFDGISDISVTTNGL------LLGRYLDRLRQAGIRRLNISLDSLKR 129

Query: 212 ---HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
                    +        I    +AG   +    V+++ +NDD
Sbjct: 130 EKYRLITGRDVFHTVWDNIMAALDAGFDPVKVNVVVMREVNDD 172


>gi|146303294|ref|YP_001190610.1| radical SAM domain-containing protein [Metallosphaera sedula DSM
           5348]
 gi|145701544|gb|ABP94686.1| Radical SAM domain protein [Metallosphaera sedula DSM 5348]
          Length = 366

 Score = 40.5 bits (94), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 3/87 (3%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           D   + +     G+  RYP  ++  +   C + C  C+        +   LS+     A+
Sbjct: 10  DRKEEADRIRYAGLKDRYPSVLVFNVTRNCNLRCLHCYSGSGTQLFQDLPLST--WINAV 67

Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRL 162
                   +  ++ +GG+PL      L
Sbjct: 68  KQ-ASDMGVKHILLSGGEPLARRDLHL 93


>gi|229815885|ref|ZP_04446209.1| hypothetical protein COLINT_02941 [Collinsella intestinalis DSM
           13280]
 gi|229808580|gb|EEP44358.1| hypothetical protein COLINT_02941 [Collinsella intestinalis DSM
           13280]
          Length = 363

 Score = 40.5 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C   C +C   + +     G +L++++    +  I  +  I  V  TGG+PL+ 
Sbjct: 18  ISVTDKCNFRCVYCMPEKGVPARAHGELLTAEEIARFVR-IVAQEGITRVRLTGGEPLVS 76

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182
              R+  +++ +R I  ++ +   +
Sbjct: 77  --HRIVPLIEEIRSISEIEDISLTT 99


>gi|187251699|ref|YP_001876181.1| MiaB family RNA modification enzyme [Elusimicrobium minutum Pei191]
 gi|186971859|gb|ACC98844.1| RNA modification enzyme, MiaB family [Elusimicrobium minutum
           Pei191]
          Length = 409

 Score = 40.5 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 13/160 (8%)

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           +Q +P  E +N     +     D++   + G   R   R  +K+   C  +C +C     
Sbjct: 88  KQNLPSAEIINKHNIAKTLFDTDDDFWAVSGNEGR--SRAFIKIQDGCDNFCSYCII-PF 144

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSH-KRLQKVLKTLRYIK 173
             ++K +             I       E++ TG   G+ L       L  +LK +  I+
Sbjct: 145 ARNKKLSKPIPSTVNEIKELIS--KGFKEIVLTGINIGNYLCPQTGADLAVLLKEIFKIE 202

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
               +RF S         +   L+   KE G       H 
Sbjct: 203 GEYRIRFSSIELNT----VTDSLLAAAKEGGSKFCNYFHI 238


>gi|260461259|ref|ZP_05809507.1| nitrogenase cofactor biosynthesis protein NifB [Mesorhizobium
           opportunistum WSM2075]
 gi|319785436|ref|YP_004144912.1| nitrogenase cofactor biosynthesis protein NifB [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
 gi|259032796|gb|EEW34059.1| nitrogenase cofactor biosynthesis protein NifB [Mesorhizobium
           opportunistum WSM2075]
 gi|317171324|gb|ADV14862.1| nitrogenase cofactor biosynthesis protein NifB [Mesorhizobium
           ciceri biovar biserrulae WSM1271]
          Length = 493

 Score = 40.5 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 45/248 (18%), Positives = 87/248 (35%), Gaps = 43/248 (17%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H Y  R+ + +   C V C +C R+         G     +   +     +A   E  Q
Sbjct: 61  AHHYFARMHVAVAPACNVQCNYCNRKYDCSNESRPGVVSEKLTPDQAVRKVIAVANEVPQ 120

Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
           +  +   G GD      ++ +   +  +R I  +++    +      P  +  EL     
Sbjct: 121 LSVLGIAGPGDA-CYDWEKTKATFERVVREIPDIKLC-ISTNGLA-LPDHV-AELADMNV 176

Query: 202 EA------------GKPVYIAIHANHPYEFSEEAIA--------AISRLANAGIILLSQS 241
           +             G  +Y  I  +H      EA          ++  L+  GI+    S
Sbjct: 177 DHVTITINMVDPEIGAKIYPWIFYDHRRYVGIEAARILHERQMLSLEMLSARGILTKINS 236

Query: 242 VLLKGINDDPEILANLMRTFVEL---RIKPYYLHHPDLAAGTSHFRLTIEEG---QKIVA 295
           V++ G+ND   +  N            + P      D A GT ++ LT + G    + + 
Sbjct: 237 VMIPGVNDQHLVEVNKQVKQRGAILHNVMPL---ISDPAHGT-YYGLTGQRGPNALE-MR 291

Query: 296 SLKEKISG 303
           +L++++ G
Sbjct: 292 ALQDRLQG 299


>gi|322417559|ref|YP_004196782.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320123946|gb|ADW11506.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 357

 Score = 40.5 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 42/221 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           P  I  +    C + C  C    E+  S+     ++++ +  L  I + S+   V+ +GG
Sbjct: 7   PKWIAWETTQRCNLKCVHCRCSSELTSSEGD--FTTEEGKKLLKEIADFSKP-VVVLSGG 63

Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAG-KPVYI 209
           +PL+      L +   +L             R+    +   +  E+ + +K+A  K V +
Sbjct: 64  EPLMRPDIFELAEYGTSL-----------GLRMCMATNGALVTDEVCEKMKKADIKMVSL 112

Query: 210 A-------IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           +       +H N    P  F     AA       G   L  S   K    +   +A   +
Sbjct: 113 SLDGSTADVHDNFRQCPGSFDGVMRAA-ELFKKHGQKFLVNSSFTK---RNQTDIAATFK 168

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
               +    +Y+             +    G++I+  L  K
Sbjct: 169 VAKSIGATAWYMFM----------IVPTGRGEEIMNELISK 199


>gi|261417406|ref|YP_003251089.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373862|gb|ACX76607.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 330

 Score = 40.5 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 16/110 (14%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C + C+ C++    G  K   L++ +    +  I + +    +IF+GG+P+ 
Sbjct: 3   VSWMTTNKCNLTCKHCYQDA--GENKSAELTTDEALKLIDEIAK-AGFKIMIFSGGEPMT 59

Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
                    +  L      + LR  F +   +     I  +L   LKEAG
Sbjct: 60  RPD------IVELVAHARERGLRPVFGTNGTL-----ITHDLAFMLKEAG 98


>gi|237795960|ref|YP_002863512.1| hypothetical protein CLJ_B2751 [Clostridium botulinum Ba4 str. 657]
 gi|229262403|gb|ACQ53436.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657]
          Length = 454

 Score = 40.5 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 39/169 (23%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L +   C   C FCF  ++    + T+    D ++ L+++Q       +  T      
Sbjct: 89  AILDVPQRCHNNCLFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FLTLT-----N 138

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
           +  + + +++     I  +  +  H+     +P+ R+  +L+                  
Sbjct: 139 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 172

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
              F+      + +LA  GI +  Q VL  G+N + E L   ++    L
Sbjct: 173 -NRFAGNIYERMKKLAQGGIKMNCQVVLCPGLN-NGEELKRTIKDLYAL 219


>gi|229099205|ref|ZP_04230137.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock3-29]
 gi|228684186|gb|EEL38132.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock3-29]
          Length = 339

 Score = 40.5 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E  +        + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLVKVFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIACLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177


>gi|206889422|ref|YP_002249076.1| deoxyribonuclease, TatD family [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741360|gb|ACI20417.1| deoxyribonuclease, TatD family [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 449

 Score = 40.5 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 8/104 (7%)

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE--MVGSQKGTVLSSKDTEAALAYIQE 140
             P   I ++  D + L + + C   CRFC R     V      +      E  +  I +
Sbjct: 251 DLPKGEIAYKIRDTLYLNVTNRCTNVCRFCVRFHTDYVKGHNLRLEKEPSAEDLIQTIGD 310

Query: 141 KSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYI-KHVQILRFHS 182
                E++F G G+P +    RL  + +  ++I +    +R ++
Sbjct: 311 PKNYKEIVFCGYGEPFL----RLDLIKEVAKWIKEQGGRVRVNT 350


>gi|168182598|ref|ZP_02617262.1| conserved hypothetical protein [Clostridium botulinum Bf]
 gi|182674230|gb|EDT86191.1| conserved hypothetical protein [Clostridium botulinum Bf]
          Length = 444

 Score = 40.5 bits (94), Expect = 0.41,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 39/169 (23%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +L +   C   C FCF  ++    + T+    D ++ L+++Q       +  T      
Sbjct: 79  AILDVPQRCHNNCLFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FLTLT-----N 128

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215
           +  + + +++     I  +  +  H+     +P+ R+  +L+                  
Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162

Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
              F+      + +LA  GI +  Q VL  G+N + E L   ++    L
Sbjct: 163 -NRFAGNIYERMKKLAQGGIKMNCQVVLCPGLN-NGEELKRTIKDLYAL 209


>gi|313888304|ref|ZP_07821975.1| ribosomal protein S12 methylthiotransferase RimO [Peptoniphilus
           harei ACS-146-V-Sch2b]
 gi|312845707|gb|EFR33097.1| ribosomal protein S12 methylthiotransferase RimO [Peptoniphilus
           harei ACS-146-V-Sch2b]
          Length = 438

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 18/138 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GG 152
           +K+   C   C +C    + G  +   +  +D  + + Y+  K     ++        G 
Sbjct: 147 VKISEGCNNNCSYCIIPSLRGKNRSRKI--EDIYSEVEYLVSKGAREIILIAQNTTDYGI 204

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
           D  + S   L  ++  +  I+ ++ +R    V  + P     ELI+  K   K V Y+ +
Sbjct: 205 D--LYSKYSLANLINKISKIEDLKWIR----VLYLYPDHFTDELIEEFKNNDKLVNYVDM 258

Query: 212 HANHPYEFSEEAIAAISR 229
              H    S++ +  ++R
Sbjct: 259 PLQH---ISDDVLKRMNR 273


>gi|299144058|ref|ZP_07037138.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386
           str. F0131]
 gi|298518543|gb|EFI42282.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386
           str. F0131]
          Length = 438

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 16/114 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GG 152
           +K+   C   C +C   ++ G  +   +  +D    + Y+        ++        G 
Sbjct: 147 VKISEGCNNNCTYCIIPKLRGRNRSRKI--EDIYDEVKYLVNNGTREVILIAQNTTDYGI 204

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD-PQRINPELIQCLKEAGK 205
           D       +L+ ++K L  IK ++ +R      +   P     ELI   K   K
Sbjct: 205 D--NYKEYKLKDLVKKLSEIKDLKWIR-----LMYLYPDNFTDELIDEFKNNDK 251


>gi|228952519|ref|ZP_04114596.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228807130|gb|EEM53672.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 337

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFNEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q       + LK+AG K V I++ 
Sbjct: 77  PLLRKD--LPKLIARLTNLEGLKDIGLTTNGIHLAKQ------AKALKDAGLKRVNISLD 128

Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
               H     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 129 AIEDHVFKKINGRNVSTKPVLKGIEAANAAGLEVKVNMVVKKGMNDS 175


>gi|229079338|ref|ZP_04211882.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock4-2]
 gi|228704006|gb|EEL56448.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock4-2]
          Length = 333

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 14  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFNEIERLARLFISM-GVNKIRLTGGE 72

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L K++  L  ++ ++ +   +    +  Q       + LK+AG K V I++ 
Sbjct: 73  PLLRKD--LPKLIARLTNLEGLKDIGLTTNGIHLAKQ------AKALKDAGLKRVNISLD 124

Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
               H     N     ++  +  I     AG+ +    V+ KG+ND 
Sbjct: 125 AIEDHVFKKINGRNVSTKPVLKGIEAANAAGLEVKVNMVVKKGMNDS 171


>gi|139439619|ref|ZP_01773032.1| Hypothetical protein COLAER_02059 [Collinsella aerofaciens ATCC
           25986]
 gi|133774960|gb|EBA38780.1| Hypothetical protein COLAER_02059 [Collinsella aerofaciens ATCC
           25986]
          Length = 449

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 21/146 (14%)

Query: 97  ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSS-KDTEAA----LAYIQEKSQIWEV 147
             +K+   C  +C FC     R         +++S  +D  A     +  I + + IW  
Sbjct: 144 AYVKISDGCNRFCSFCMIPYIRGRYHSRNSESIISEVRDLVAGGVREIVLIGQDTGIWGT 203

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS---RVPIVDPQRINPELIQCLKEAG 204
            F   D    S + L ++L+ +      + +R H+   RV  + P+ +  ELI  +++  
Sbjct: 204 DFADEDVADGSPRNLAQLLRAVA-----EAVRPHNVWVRVLYLQPEGMTDELIDTIRDTP 258

Query: 205 KPV-YIAIHANHPYEFSEEAIAAISR 229
           + + YI I   H        + A+ R
Sbjct: 259 EVLPYIDIPVQH---CDARILKAMRR 281


>gi|323527295|ref|YP_004229448.1| RNA modification enzyme, MiaB family [Burkholderia sp. CCGE1001]
 gi|323384297|gb|ADX56388.1| RNA modification enzyme, MiaB family [Burkholderia sp. CCGE1001]
          Length = 461

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 26/138 (18%)

Query: 91  HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
           H  P R+      + ++  C  YC +C     V         S+  +  L  I       
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192

Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           + EV   G +       L L    +     +++ +  I  ++ +R+ +      P+    
Sbjct: 193 VREVTLLGQNVNAYRGALTLGSSEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248

Query: 195 ELIQCLKEAGKPVYIAIH 212
            LI    +  K +   +H
Sbjct: 249 RLIDTYAKVPK-LVSHLH 265


>gi|74317041|ref|YP_314781.1| GTP cyclohydrolase subunit MoaA [Thiobacillus denitrificans ATCC
           25259]
 gi|74056536|gb|AAZ96976.1| Elongator protein 3/MiaB/NifB [Thiobacillus denitrificans ATCC
           25259]
          Length = 327

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 22/171 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFT 150
           R+ D + L +   C + C +C      G ++    L   + E  L        +  V  T
Sbjct: 12  RHIDYVRLSVTDRCDLRCSYCMPEGFKGFEEPADWLDFDEIERLLGAFAR-LGVRRVRLT 70

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG------ 204
           GG+PL+     +  + + +  +  ++ L   +                 LK AG      
Sbjct: 71  GGEPLLRRD--ISGLARRIASLPGIEDLSLSTNA------TQLDRHAAALKAAGVTRLNV 122

Query: 205 ----KPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDD 250
                        N   +   + +  ++    AG   +    V ++G NDD
Sbjct: 123 SLDSLQQARVERIN-GRDVLAKVMTGLAAAQEAGFAPIKLNMVAMRGSNDD 172


>gi|15644078|ref|NP_229127.1| astB/chuR-related protein [Thermotoga maritima MSB8]
 gi|4981884|gb|AAD36397.1|AE001787_2 astB/chuR-related protein [Thermotoga maritima MSB8]
          Length = 454

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 25/162 (15%)

Query: 62  PQKEELNILPEER--------EDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCR 110
           P   EL+    E+        +D   +      +   +RY DR L   + L H C   C 
Sbjct: 44  PSSTELSKTEVEKLKRGMFLLDDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCV 103

Query: 111 FCFRREMVGSQKGTVLSSK------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK--RL 162
           +C+++ +  S    +          D E  L Y  +K  +  V F GG+PL+L      L
Sbjct: 104 YCYQKVLHISSGSYISEKVQSNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEETVVNL 161

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
              LK L     V+   F     + +   +  +++  L++AG
Sbjct: 162 SSKLKRLCEKYGVKYDSF----IVTNGYLLTEKMVDDLQKAG 199


>gi|282878779|ref|ZP_06287547.1| translation initiation factor IF-1 [Prevotella buccalis ATCC 35310]
 gi|282880979|ref|ZP_06289670.1| translation initiation factor IF-1 [Prevotella timonensis CRIS
           5C-B1]
 gi|281299170|gb|EFA91571.1| translation initiation factor IF-1 [Prevotella buccalis ATCC 35310]
 gi|281305202|gb|EFA97271.1| translation initiation factor IF-1 [Prevotella timonensis CRIS
           5C-B1]
          Length = 72

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ +E G +I+      ISG  +  YI  LPG   KV++  +++ K   G     
Sbjct: 22  FRVELENGVEII----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70


>gi|225574860|ref|ZP_03783470.1| hypothetical protein RUMHYD_02938 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037934|gb|EEG48180.1| hypothetical protein RUMHYD_02938 [Blautia hydrogenotrophica DSM
           10507]
          Length = 447

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 18/125 (14%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT----- 150
           R  +K+   C  +C +C      G  +    S  + +  +  +       EV+ T     
Sbjct: 151 RAYIKVQDGCNQFCTYCIIPYTRGRVRSR--SKDEVQKEVVRL-ANRGYHEVVLTGIHLS 207

Query: 151 --GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
             G D        L  +++ +  +  +  +R  S    ++P  I  E ++ L E  K   
Sbjct: 208 SYGVD-FKEQPDSLLDLIRAIHQVDGITRIRLSS----LEPGVITEEFVKGLAELWK--- 259

Query: 209 IAIHA 213
           +  H 
Sbjct: 260 VCPHF 264


>gi|224372902|ref|YP_002607274.1| hypothetical protein NAMH_0871 [Nautilia profundicola AmH]
 gi|223589641|gb|ACM93377.1| conserved hypothetical protein [Nautilia profundicola AmH]
          Length = 408

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 20/123 (16%), Positives = 49/123 (39%), Gaps = 10/123 (8%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +  +K+   C   C +C    + G      L        +  + +   I E + TG +  
Sbjct: 128 KAFVKIQEGCDFECAYCIIPSVRG--HSRSLPENIILEQIKTLSQN-GISEFVLTGINMG 184

Query: 156 IL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
                ++  L ++++ +  I+ V+ +R  S    ++P +++  LI+  +      ++ I 
Sbjct: 185 SYGKDTNTTLSELIEKISKIRGVKRIRLGS----LEPSQLDERLIELTQNGILEKHLHIA 240

Query: 213 ANH 215
             H
Sbjct: 241 LQH 243


>gi|189463972|ref|ZP_03012757.1| hypothetical protein BACINT_00307 [Bacteroides intestinalis DSM
           17393]
 gi|189438545|gb|EDV07530.1| hypothetical protein BACINT_00307 [Bacteroides intestinalis DSM
           17393]
          Length = 439

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 13/134 (9%)

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           HS           R  LK+   C  YC +C        +      +   E A        
Sbjct: 137 HSFAPSCSRGDRTRYFLKVQDGCDYYCSYCTI-PFARGRSRNGTVASMVEQARQ--AAAE 193

Query: 143 QIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
              E++ TG   GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ 
Sbjct: 194 GGKEIVLTGVNIGDFGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEF 249

Query: 200 LKEAGKPVYIAIHA 213
           +  +        H 
Sbjct: 250 VSHSR---SFMPHF 260


>gi|182678041|ref|YP_001832187.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Beijerinckia
           indica subsp. indica ATCC 9039]
 gi|229890430|sp|B2IIK5|MIAB_BEII9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|182633924|gb|ACB94698.1| RNA modification enzyme, MiaB family [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 510

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 15/100 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG-- 152
             + +   C  +C FC     V        +S+  EA LA ++    S + EV   G   
Sbjct: 187 AFVTVQEGCDKFCSFC-----VVPYTRGAETSRPVEAILAEVETLIASGVREVTLIGQNV 241

Query: 153 ------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                 D +  +   L  ++  +  +  +  +R+ +  P 
Sbjct: 242 NAYHGFDAMTGAPASLASLMARVAAMPGLLRIRYTTSHPN 281


>gi|1361913|pir||S57481 molybdopterin biosynthesis protein moaA - Methanobacterium
           thermoautotrophicum (strain Marburg) (fragment)
 gi|871467|emb|CAA61207.1| moaA [Methanothermobacter thermautotrophicus]
          Length = 87

 Score = 40.5 bits (94), Expect = 0.42,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 6/83 (7%)

Query: 91  HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           HR P   L + +   C V C +C R  ++ S +   +S +D E     +     + ++  
Sbjct: 7   HRRPLVSLRISVTGRCNVSCIYCHRDGILRSDEE--MSPEDIENICR-VASDLGVKKIRL 63

Query: 150 TGGDPLILSHKRLQKVLKTLRYI 172
           +GG+PLI     + ++++ +  I
Sbjct: 64  SGGEPLIRDD--IVEIVEKINSI 84


>gi|237808516|ref|YP_002892956.1| molybdenum cofactor biosynthesis protein A [Tolumonas auensis DSM
           9187]
 gi|259495873|sp|C4LFK3|MOAA_TOLAT RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|237500777|gb|ACQ93370.1| molybdenum cofactor biosynthesis protein A [Tolumonas auensis DSM
           9187]
          Length = 336

 Score = 40.5 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 28/179 (15%), Positives = 64/179 (35%), Gaps = 22/179 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C   C +C         + + L+  +    + Y   +  + ++  TGG+P +  
Sbjct: 27  LSVTEACNFRCTYCLPDGYRPDGRKSFLTVDEIRRVV-YGFAELGVKKIRLTGGEPSMRR 85

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
              L  +++T+     ++ +         +  R+     Q      + + ++I +  P +
Sbjct: 86  D--LPAIIETVANTAGIEKV-----AMTTNGYRLKDRAQQWFDAGLRSLNVSIDSLDPRQ 138

Query: 219 ---FSEEAI-----AAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
               + E         +     AG   +   +VLLK +ND       L +    L+ +P
Sbjct: 139 FQLITGENKLVEILEGLEAAQKAGFRKIKVNTVLLKNLNDH-----ELSQFLFWLKKQP 192


>gi|251798763|ref|YP_003013494.1| radical SAM protein [Paenibacillus sp. JDR-2]
 gi|247546389|gb|ACT03408.1| Radical SAM domain protein [Paenibacillus sp. JDR-2]
          Length = 379

 Score = 40.5 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 9/88 (10%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
            ++C VYCRFC      GS +G VLS+   E  L  IQE   +   E++  GG      +
Sbjct: 62  TNICDVYCRFCAFYRAPGSNEGYVLSN---ETILNKIQETIDVGGTEILMQGG---TNPN 115

Query: 160 KRLQKVLKTLRYIK-HVQILRFHSRVPI 186
                    LR IK H   +  HS  P 
Sbjct: 116 LPFSYYTDLLREIKQHFPDITMHSFSPA 143


>gi|332981525|ref|YP_004462966.1| 30S ribosomal protein S12P methylthiotransferase [Mahella
           australiensis 50-1 BON]
 gi|332699203|gb|AEE96144.1| SSU ribosomal protein S12P methylthiotransferase [Mahella
           australiensis 50-1 BON]
          Length = 440

 Score = 40.5 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 27/147 (18%)

Query: 80  DNNHSPLKGIVHRY----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           +     ++GI  R     P    +K+   C   C +C    + G  +   +     E  +
Sbjct: 127 EGGDVSVEGIEKRILSTPPYMAYVKIAEGCDNGCSYCIIPFLRGPYRSRPM-----ENII 181

Query: 136 AYIQE--KSQIWEVIFTGGD-PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
              +E     + E+I    D  +         RL ++L  L  I +++ +R    V    
Sbjct: 182 EECKELVDRGVKEIILIAQDTSVYGRDIYGKPRLAELLHELDNINNIEWIR----VLYCY 237

Query: 189 PQRINPELIQCLKEAGKPVYIAIHANH 215
           P  +N ELI+ + ++        H  H
Sbjct: 238 PDYVNDELIEAIVQSR-------HVCH 257


>gi|299143546|ref|ZP_07036626.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 386 str.
           F0131]
 gi|298518031|gb|EFI41770.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 386 str.
           F0131]
          Length = 288

 Score = 40.5 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 6/85 (7%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDP 154
           ++++    C    C FC+   M   +   +    D  A L  I++   Q   V    GD 
Sbjct: 17  LIIQATIGCSHNDCTFCY---MYKDEPFIIRKIDDIIAELETIRDYFPQFERVFIADGDA 73

Query: 155 LILSHKRLQKVLKTLRY-IKHVQIL 178
           L+L    L ++L+ +     +V  +
Sbjct: 74  LVLKTTDLLRLLEYINKNFPNVNRI 98


>gi|167753010|ref|ZP_02425137.1| hypothetical protein ALIPUT_01274 [Alistipes putredinis DSM 17216]
 gi|167659324|gb|EDS03454.1| hypothetical protein ALIPUT_01274 [Alistipes putredinis DSM 17216]
          Length = 432

 Score = 40.5 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 35/198 (17%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--- 153
             LK+   C   C +C    ++     +V      E A         + E+I    D   
Sbjct: 136 AYLKISEGCNWKCGYCAI-PLIRGPHASVPMETLLEEARK--LAAGGVRELIVIAQDTTY 192

Query: 154 -PLIL-SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
             L L   +RL ++L+ L  I  ++ +R H   P   P     E+I+ +    K   Y+ 
Sbjct: 193 YGLDLYGKRRLAELLEALCRIDGIRWIRLHYAYPTAFP----DEVIEVMAREPKICKYLD 248

Query: 211 IHANHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKG----INDDPEI 253
           I   H    S++ +AA+ R             L  A   L  ++ LL G       D E 
Sbjct: 249 IPFQH---ISDDQLAAMHRRHTKAQAYELIDKLRQAIPDLALRTTLLVGYPGETEADFEE 305

Query: 254 LANLMR--TFVELRIKPY 269
           L   +R   F  L + PY
Sbjct: 306 LLEFVRTVRFERLGVFPY 323


>gi|86742221|ref|YP_482621.1| hypothetical protein Francci3_3540 [Frankia sp. CcI3]
 gi|123737129|sp|Q2J750|RIMO_FRASC RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|86569083|gb|ABD12892.1| SSU ribosomal protein S12P methylthiotransferase [Frankia sp. CcI3]
          Length = 523

 Score = 40.5 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 50/144 (34%), Gaps = 16/144 (11%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
            +LK+   C   C FC    FR   V      VL+  +  A     +           G 
Sbjct: 184 AVLKISSGCDRRCAFCAIPSFRGSHVSRSPDDVLAEAEWLAGQGARELVLVSENSTSYGK 243

Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ-CLKEAGKPVYIA 210
           D   L   + L+K+L  L  +  +  +R       + P  + P L++  L   G   Y+ 
Sbjct: 244 D---LGDLRALEKLLPQLAAVSGIVRVR----TVYLQPAEMRPSLLEVLLTTPGLAPYLD 296

Query: 211 IHANHPYEFSEEAIAAISRLANAG 234
           +   H    S   +  + R   +G
Sbjct: 297 LSFQHA---SPPVLRRMRRFGGSG 317


>gi|15804047|ref|NP_290083.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 EDL933]
 gi|15833637|ref|NP_312410.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|168746962|ref|ZP_02771984.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4113]
 gi|168753312|ref|ZP_02778319.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4401]
 gi|168759583|ref|ZP_02784590.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4501]
 gi|168765907|ref|ZP_02790914.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4486]
 gi|168772547|ref|ZP_02797554.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4196]
 gi|168779643|ref|ZP_02804650.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4076]
 gi|168785365|ref|ZP_02810372.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC869]
 gi|168797330|ref|ZP_02822337.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC508]
 gi|195935030|ref|ZP_03080412.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808940|ref|ZP_03251277.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4206]
 gi|208814241|ref|ZP_03255570.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4045]
 gi|208818610|ref|ZP_03258930.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4042]
 gi|209395960|ref|YP_002272979.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4115]
 gi|217326043|ref|ZP_03442127.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. TW14588]
 gi|254795455|ref|YP_003080292.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261224817|ref|ZP_05939098.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. FRIK2000]
 gi|261254287|ref|ZP_05946820.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. FRIK966]
 gi|291284875|ref|YP_003501693.1| putative coproporphyrinogen III oxidase [Escherichia coli O55:H7
           str. CB9615]
 gi|12518212|gb|AAG58644.1|AE005576_3 putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. EDL933]
 gi|13363857|dbj|BAB37806.1| putative coproporphyrinogen oxidase [Escherichia coli O157:H7 str.
           Sakai]
 gi|187771599|gb|EDU35443.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4196]
 gi|188018368|gb|EDU56490.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4113]
 gi|189002627|gb|EDU71613.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4076]
 gi|189359172|gb|EDU77591.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4401]
 gi|189364804|gb|EDU83223.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4486]
 gi|189369751|gb|EDU88167.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4501]
 gi|189374481|gb|EDU92897.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC869]
 gi|189379883|gb|EDU98299.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC508]
 gi|208728741|gb|EDZ78342.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4206]
 gi|208735518|gb|EDZ84205.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4045]
 gi|208738733|gb|EDZ86415.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4042]
 gi|209157360|gb|ACI34793.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. EC4115]
 gi|217322264|gb|EEC30688.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7
           str. TW14588]
 gi|254594855|gb|ACT74216.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli O157:H7 str. TW14359]
 gi|290764748|gb|ADD58709.1| Putative coproporphyrinogen III oxidase [Escherichia coli O55:H7
           str. CB9615]
 gi|320639818|gb|EFX09412.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           G5101]
 gi|320645318|gb|EFX14334.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str.
           493-89]
 gi|320650629|gb|EFX19095.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str. H
           2687]
 gi|320655823|gb|EFX23746.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661605|gb|EFX29020.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320666628|gb|EFX33611.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326337500|gb|EGD61335.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1044]
          Length = 445

 Score = 40.5 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 24/168 (14%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGD---NNHSPLKGIVHRYP 94
           LTP  A  ++   P  D   R  +P +  + +  E+      +      SP         
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTASP--------R 56

Query: 95  DRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIF 149
            R++   +  C  +C FC F +           +    ++ E  A + + + + I  V F
Sbjct: 57  KRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYF 116

Query: 150 TGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            GG P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 117 GGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|116625479|ref|YP_827635.1| GTP cyclohydrolase subunit MoaA [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116228641|gb|ABJ87350.1| GTP cyclohydrolase subunit MoaA [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 331

 Score = 40.5 bits (94), Expect = 0.43,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%)

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQE 140
           N +PL    HR  D + + +   C + C +C     V   ++  +L  ++ E  +  +  
Sbjct: 2   NATPLVDSFHRVHDNLRISVTDRCNIRCFYCMPETGVTFVERREILDFEEIERFVR-VAA 60

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
              I ++  TGG+PL+     L  ++  L  I  +Q L
Sbjct: 61  GLGIRKLRVTGGEPLLRRD--LPVLIGRLACIPGIQDL 96


>gi|17988440|ref|NP_541073.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M]
 gi|17984225|gb|AAL53337.1| oxygen-independent coproporphyrinogen iii oxidase [Brucella
           melitensis bv. 1 str. 16M]
          Length = 474

 Score = 40.5 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
            D  L   +  C   C +C           T ++ KD +  L Y+     +I        
Sbjct: 70  QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 120

Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
                 E+ F GG P I+    L  ++  LR        R       +    +DP+R+ P
Sbjct: 121 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 173

Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           E+   L  +G     + +       F  +   AI+R+  A   L
Sbjct: 174 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 212


>gi|332884205|gb|EGK04473.1| ribosomal protein S12 methylthiotransferase rimO [Dysgonomonas
           mossii DSM 22836]
          Length = 431

 Score = 40.5 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 14/112 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFT 150
             LK+   C   C +C    M G  +   +  ++ E  +  +        +    ++ F 
Sbjct: 138 AYLKISEGCNRTCSYCSIPIMTGKHQSRPI--EEIEEEVRNLVAVGVKEFQVIAQDLSFY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           G D       +L ++++ +  I+ V+ +R H   P   P     +L++ ++E
Sbjct: 196 GYD--NYKQAKLPELIERIAKIEGVKWIRLHYAYPANFPY----DLLRVMRE 241


>gi|169831502|ref|YP_001717484.1| radical SAM domain-containing protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638346|gb|ACA59852.1| Radical SAM domain protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 334

 Score = 40.5 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 44/291 (15%), Positives = 91/291 (31%), Gaps = 78/291 (26%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     ++C + C  C+R    G +    LS+ + +A +  I   +    +IF+GG+PL+
Sbjct: 3   VSWNTTNMCNLACAHCYRDA--GQKAEDELSTAEGKALIDEIAG-AGFKIMIFSGGEPLM 59

Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
                +  ++         + LR    S   +     I PE+   L +AG + + I++  
Sbjct: 60  RPD--IYDLIAYAAS----RGLRPVLGSNGTL-----ITPEVAGRLVQAGARAIGISL-- 106

Query: 214 NHPYEFSE--------------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
                                  A+  +     AG+     + ++    ++ E L +L  
Sbjct: 107 ---DSVDPGAHDGFRAEKGSWQAAVEGMKNCRAAGLPFQVHTTVMDWNEEEVEGLTDLAV 163

Query: 260 TFVELRIKPYYLHHPDLAAGTSH---FRLTIEEGQKI---------VASLKEK------I 301
                              G +H   F +       I            L  +       
Sbjct: 164 EL----------------GGIAHHVFFLVPTGRALAIEHTTLRARQYEQLLRRLLKKQQT 207

Query: 302 SGL-----CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347
           +GL     C P +I        K +     +  +   +YC+ +    +   
Sbjct: 208 AGLEVKPTCAPQFIRVADQLGAKTRFTRGCLAGI---AYCLVNPVGDLQAC 255


>gi|83589452|ref|YP_429461.1| MiaB-like tRNA modifying enzyme [Moorella thermoacetica ATCC 39073]
 gi|83572366|gb|ABC18918.1| MiaB-like tRNA modifying enzyme [Moorella thermoacetica ATCC 39073]
          Length = 450

 Score = 40.5 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 41/122 (33%), Gaps = 13/122 (10%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           R  LK+   C  +C +C      G    +   L   +    +   Y++           G
Sbjct: 145 RAFLKIQEGCQEFCTYCIVPYARGPLRSRDPELIRAEVRRLVDAGYLEIVLTGVHTGAYG 204

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
            D  +     L  +LK L  +  ++ LR  S    +DP    PEL   L   G    I  
Sbjct: 205 RD--LAGDIDLAGLLKNLVQVPGLRRLRISS----IDPLDFTPELKAVLTGEG---IICP 255

Query: 212 HA 213
           H 
Sbjct: 256 HF 257


>gi|326388685|ref|ZP_08210278.1| radical SAM domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326206936|gb|EGD57760.1| radical SAM domain-containing protein [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 424

 Score = 40.5 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 39/175 (22%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155
            ++++   C + C  CF       + G      + E  L  + + + +   V  +GG+P 
Sbjct: 54  AIIEVTEACDLACPVCF--ADAADRNGRHRPLAEIETMLDVLVESEGEPDLVQISGGEP- 110

Query: 156 ILSHKRLQKVLKTL--RYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
            L  +    +L  +  R I+HV I    +R             +P  +  L      + I
Sbjct: 111 TLHPEFFA-ILDAVKRRPIRHVMINTNGVRLAQ----------DPTFVARLATYRPALEI 159

Query: 210 AIHANHPY----------EFSEEAIAAISRLANAGIILLSQSVLL----KGINDD 250
            +  +               S     A+  L  AGI     + L+     G+NDD
Sbjct: 160 YLQFDSLRDEALMDLRGARLSRIRKEALEALEQAGIS----TTLVVAVKHGVNDD 210


>gi|296132944|ref|YP_003640191.1| MiaB-like tRNA modifying enzyme YliG [Thermincola sp. JR]
 gi|296031522|gb|ADG82290.1| MiaB-like tRNA modifying enzyme YliG [Thermincola potens JR]
          Length = 439

 Score = 40.5 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 53/144 (36%), Gaps = 21/144 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFTG 151
           P    +K+   C   C +C    + G + G     K+   +     ++    + EVI   
Sbjct: 144 PYTAYVKIAEGCDNRCSYC---AIPGIRGGYRSRPKESILQEVNDLVRR--GVKEVILIA 198

Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
            D             L ++++ +  +  V  +R         P RI  +LIQ ++   K 
Sbjct: 199 QDTTRYGTDIYGRYALAELIQEIASLP-VHWIRI----LYAYPTRITDDLIQIIRGEPKV 253

Query: 207 V-YIAIHANHPYEFSEEAIAAISR 229
             Y+ +   H     ++ I A++R
Sbjct: 254 CKYLDMPIQH---VDKDIIKAMNR 274


>gi|91784732|ref|YP_559938.1| molybdenum cofactor biosynthesis protein A [Burkholderia xenovorans
           LB400]
 gi|91688686|gb|ABE31886.1| GTP cyclohydrolase subunit MoaA [Burkholderia xenovorans LB400]
          Length = 369

 Score = 40.5 bits (94), Expect = 0.44,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  R +            +LS ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRAVFDKDYTFLPHSALLSFEEIERLARIFVAH-GVEKIRLTGGE 99

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K L+ ++  L  +
Sbjct: 100 PLL--RKNLEFLIDRLARL 116


>gi|315181901|gb|ADT88814.1| radical SAM domain protein [Vibrio furnissii NCTC 11218]
          Length = 294

 Score = 40.5 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 5/79 (6%)

Query: 95  DRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTE-AALAYIQEKSQIWEVIFTGG 152
           + ILL++   C    CRFC            +   K  E       +       +   GG
Sbjct: 15  NSILLEVTVGCTHNSCRFCT---FYYDTPYRIAPKKQVEHDLQEAQRVNPNAKRIYAVGG 71

Query: 153 DPLILSHKRLQKVLKTLRY 171
           DP  L   +L  + + +R 
Sbjct: 72  DPFTLRTAKLVDLARMIRR 90


>gi|294101544|ref|YP_003553402.1| Radical SAM domain protein [Aminobacterium colombiense DSM 12261]
 gi|293616524|gb|ADE56678.1| Radical SAM domain protein [Aminobacterium colombiense DSM 12261]
          Length = 315

 Score = 40.5 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 14/118 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R +   +  CP  C +C +R + G  +    S  +    L+ + E  ++    F G  
Sbjct: 2   KRRAVFLPMRNCPHRCIYCDQRAITGEYQP--PSPHEVVTMLSTLLEPVEL--CYFGGS- 56

Query: 154 PLILSHKRL-QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                 +RL ++ L  +        +RF +         I+ + ++ LK+   P+ + 
Sbjct: 57  -FTCQPERLQEEYLAAIVAAPSGSSVRFSTHPLC-----ISRDTVERLKKF--PISMV 106


>gi|169350747|ref|ZP_02867685.1| hypothetical protein CLOSPI_01520 [Clostridium spiroforme DSM 1552]
 gi|169292610|gb|EDS74743.1| hypothetical protein CLOSPI_01520 [Clostridium spiroforme DSM 1552]
          Length = 461

 Score = 40.5 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 9/118 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C +CF  +     +  ++S +  + AL ++ E S      EV F GG+PL
Sbjct: 104 LHVAHTCNLNCSYCFASQGKYKGERALMSFEVGKQALDFLVENSGTRHNLEVDFFGGEPL 163

Query: 156 ILSHKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
            ++ + ++ ++   R I+    +  RF       +   I+ E+I+        V +++
Sbjct: 164 -MNFQVVKDLVAYARSIEKEKNKNFRF---TLTTNGMLIDDEVIEFANRECSNVVLSL 217


>gi|152983231|ref|YP_001352703.1| hypothetical protein mma_1013 [Janthinobacterium sp. Marseille]
 gi|151283308|gb|ABR91718.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 480

 Score = 40.5 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 16/132 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGG 152
           P   ++     C   C++C     +  + G  +  +D +AA   I E S     V F GG
Sbjct: 89  PSLHIIVPTLQCAHSCKYCQVSRSLNDE-GHTIKIEDLDAACESIFESSSPTLTVEFQGG 147

Query: 153 DPLILSHKRLQKVLKTLRYIKHV-----QILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           DPL+    R   V + + YI  +     + +R+   V      ++N E+    KE    V
Sbjct: 148 DPLL----RFDLVRRAILYITSLNKSQNRRIRY---VVASTLHQLNVEMCLFFKE--HKV 198

Query: 208 YIAIHANHPYEF 219
           Y++   + P   
Sbjct: 199 YLSTSIDGPSRL 210


>gi|148508185|gb|ABQ75975.1| molybdopterin-based tungsten cofactor biosynthesis protein
           [uncultured haloarchaeon]
          Length = 572

 Score = 40.5 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            ++++   C + C FCF         GT  S +  E  L  I +      + F+GG+P  
Sbjct: 175 AVIEVTSDCNLSCSFCFAS---SGPGGTHRSFETVEKLLQTIVKSGGPRPIQFSGGEP-T 230

Query: 157 LSHKRLQKVLKTLRYI--KHVQI 177
           +    L ++++    +  +H+QI
Sbjct: 231 VRDD-LPEIVERAGQMGFEHIQI 252


>gi|119871554|ref|YP_929561.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM
           4184]
 gi|119672962|gb|ABL87218.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184]
          Length = 216

 Score = 40.5 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFTGGDPL 155
            +   L  CP+ CR+C  +       G  + +++  + A AY     Q+  V+ TGG+PL
Sbjct: 23  AVFIRLAGCPIRCRYCDTKYSWDPLGGVEIDAEEVVQRAAAY----GQLGHVVITGGEPL 78

Query: 156 ILSHKRLQKVLKTLRYIKHVQI 177
           I   + L ++   LR +  V++
Sbjct: 79  I--WRNLHELACPLRRLGTVEV 98


>gi|110667956|ref|YP_657767.1| molybdopterin-based tungsten cofactor biosynthesis protein
           [Haloquadratum walsbyi DSM 16790]
 gi|109625703|emb|CAJ52135.1| molybdopterin-based tungsten cofactor biosynthesis protein
           [Haloquadratum walsbyi DSM 16790]
          Length = 572

 Score = 40.5 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            ++++   C + C FCF         GT  S +  E  L  I +      + F+GG+P  
Sbjct: 175 AVIEVTSDCNLSCSFCFAS---SGPGGTHRSFETVEKLLQTIVKSGGPRPIQFSGGEP-T 230

Query: 157 LSHKRLQKVLKTLRYI--KHVQI 177
           +    L ++++    +  +H+QI
Sbjct: 231 IRDD-LPEIVERAGQMGFEHIQI 252


>gi|322420567|ref|YP_004199790.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320126954|gb|ADW14514.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 294

 Score = 40.5 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 12/82 (14%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEVIFT 150
           ++ ++   C    CRFC      G  K      +  +  LA I+      +  +  V   
Sbjct: 19  LIFQITIGCSQNRCRFC------GMYKMKHFRIRSLDQVLAEIRSVPPRYRPCVRRVFLA 72

Query: 151 GGDPLILSHKRLQKVLKTLRYI 172
            GD LI   + L ++L  L  +
Sbjct: 73  DGDALIYPQEGLGRILDELSDV 94


>gi|331004679|ref|ZP_08328140.1| hypothetical protein HMPREF0491_03002 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330409504|gb|EGG88946.1| hypothetical protein HMPREF0491_03002 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 449

 Score = 40.5 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 65/162 (40%), Gaps = 19/162 (11%)

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYP------------DRILLKLLHVCPVYCRF 111
            +E      + +D + +  +S +     +Y             +R+++ L + C + C +
Sbjct: 41  AKEDIKKQFDIDDNMYEKYYSNIFNSYSKYTVINVEKSAEKNLNRLVIHLTNDCNMRCGY 100

Query: 112 CFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
           C+        + +++     +  +  +  E   I  + F GG+PL ++++ ++   K + 
Sbjct: 101 CYANGGAYYSQRSIMDKAVLDKLVDRFFGEFHIINNIQFFGGEPL-MNYELMEYACKIVS 159

Query: 171 YIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            I   +   + F     + +   I+ + I  +K+    V I+
Sbjct: 160 SIAKKRNYNITFG---LVTNGTLIDCKFIDLVKKFNIQVTIS 198


>gi|288947682|ref|YP_003445065.1| Radical SAM domain protein [Allochromatium vinosum DSM 180]
 gi|288898198|gb|ADC64033.1| Radical SAM domain protein [Allochromatium vinosum DSM 180]
          Length = 581

 Score = 40.5 bits (94), Expect = 0.45,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 73/210 (34%), Gaps = 46/210 (21%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFR------REMVGSQKGTVLSSKDTEAALAYIQ 139
           +K + HR    +   +   C   C FC        RE   +++  +    D   AL Y  
Sbjct: 72  IKSLPHR--RSVRFSITEKCNYRCFFCHEEGLDMDRERQKTEEAALFKVFDQLKALDY-- 127

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI---KHVQILRFHSRVPIVDPQRINPEL 196
                 ++ FTGG+PL L  +++ + L+ ++ I     V+ +    RV        N   
Sbjct: 128 -----DDLTFTGGEPL-LKWRQILRALEYMQAIGYRPDVKFVSNG-RVL-------NDTF 173

Query: 197 IQCLKEA--GKPVYIAIH---------ANHPYEFS--------EEAIAAISRLANAGIIL 237
           I+ LK         I++H           HP                  ++RL  A I  
Sbjct: 174 IEGLKRYPGRVRFNISMHSLDSACYDRIVHPLSSHTPGTRDDLAHVQHNLARLNAAEIPF 233

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIK 267
               VLL G+N   E +  +    +    +
Sbjct: 234 KLNFVLLNGLNTSAEQIDRIFAYALACGAR 263


>gi|240169459|ref|ZP_04748118.1| Fe-S oxidoreductase [Mycobacterium kansasii ATCC 12478]
          Length = 491

 Score = 40.1 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 40/107 (37%), Gaps = 13/107 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           P+ +LLKL   C + C +C+   +           L        +  +  ++    + F 
Sbjct: 106 PNALLLKLTGGCNIACTYCYDYDKTRF-----RARLDDDRIHELVDVLIARNSHLSIAFH 160

Query: 151 GGDPLILSHKRLQKVL----KTLRYIKHVQILRFHSRVPIVDPQRIN 193
           GG+PL L   ++++ +    +    + H+      +      P  ++
Sbjct: 161 GGEPL-LRWDQIKRTVSYARERAAAVGHLVSFSIQTNGLFFTPAVVD 206


>gi|16950513|dbj|BAB72009.1| quinohemoprotein amine dehydrogenase unknown subunit. [Pseudomonas
           putida]
          Length = 476

 Score = 40.1 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 27/187 (14%), Positives = 67/187 (35%), Gaps = 26/187 (13%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTG 151
           + ++L +   C + C +C++ ++     G  +S+   EA++  + +     Q + V+F G
Sbjct: 102 NTVVLNVNTGCNLSCTYCYKEDLDKPSAGKKMSTATAEASVEMLLKESPDEQRYSVVFFG 161

Query: 152 GDPLILSH--KRLQKVLKT--LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           G+PL      + +    +       K V+ +         +   +  E++  L      +
Sbjct: 162 GEPLSNRPLIEHMVAYCERRFAEAGKQVEFI------MTTNATLLTEEIVDWLNAHRFGL 215

Query: 208 YIAI----HANHPYEFS-------EEAIAAISRL--ANAGIILLSQSVLLKGINDDPEIL 254
            ++I      +     +       +     +  L        + ++  L +GI D   I 
Sbjct: 216 SVSIDGPKTVHDRNRITVGGQGTYDVVRRKVDMLLSRYHSRPVGARVTLTRGITDVETIW 275

Query: 255 ANLMRTF 261
            +L    
Sbjct: 276 NHLFNEL 282


>gi|218781894|ref|YP_002433212.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218763278|gb|ACL05744.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 340

 Score = 40.1 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 67/163 (41%), Gaps = 18/163 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C + C++C+R    G     V+  +  + A+       + + +  TGG+PL L+
Sbjct: 11  LSVTGKCNLACKYCYR----GEPNNDVMKPEWAKTAIDLAAASGEGFHIQITGGEPL-LA 65

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA----IHA- 213
              + K+L+ ++  K VQ     S     +   I+  + + L      + ++    IH  
Sbjct: 66  WDMILKLLEYIQKSK-VQ----ASVGLQTNGTLIDDNIARALLAHKVQLGVSLDGPIHIH 120

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256
           N     +E+ +  ++ L +  +   + +V+     D+   L  
Sbjct: 121 NKLRGKAEQTLNNLALLTDRNVPFRTTTVVTA---DNAASLGK 160


>gi|89095299|ref|ZP_01168218.1| radical SAM domain protein [Oceanospirillum sp. MED92]
 gi|89080418|gb|EAR59671.1| radical SAM domain protein [Oceanospirillum sp. MED92]
          Length = 299

 Score = 40.1 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 12/122 (9%)

Query: 95  DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGG 152
           + ++L++ + C    C FC     +  +K      ++ EA +     +   +  V    G
Sbjct: 21  NSLILQVTNGCSWNKCTFC-EMYTLPQKKFRPKPQQEIEAEIKACAAQLGAVRRVFLADG 79

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV-DPQRINP---ELIQCLKEAGKPVY 208
           D + LS KRL+++L  ++   H+  +   +RV     P+ +N    E +  L+E G  + 
Sbjct: 80  DAMALSFKRLKEILLAIKT--HLPTV---TRVSSYCLPRNLNNKSVEELAELRELGLQLM 134

Query: 209 IA 210
             
Sbjct: 135 YV 136


>gi|299067006|emb|CBJ38201.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
           CMR15]
          Length = 373

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F ++    Q   +LS ++ E  +    E   + ++  TGG+
Sbjct: 48  ISVTDRCNFRCIYCMPKDVFDKDYRFLQHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 106

Query: 154 PLILSH-KRLQKVLKTL 169
           PL+    +RL ++L  L
Sbjct: 107 PLLRKDIERLVEMLARL 123


>gi|260564161|ref|ZP_05834646.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 1 str. 16M]
 gi|260151804|gb|EEW86897.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 1 str. 16M]
          Length = 450

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
            D  L   +  C   C +C           T ++ KD +  L Y+     +I        
Sbjct: 46  QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 96

Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
                 E+ F GG P I+    L  ++  LR        R       +    +DP+R+ P
Sbjct: 97  RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 149

Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           E+   L  +G     + +       F  +   AI+R+  A   L
Sbjct: 150 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 188


>gi|257062972|ref|YP_003142644.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
 gi|256790625|gb|ACV21295.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
          Length = 293

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 99  LKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTGGDPL 155
           L++   C    C+FC         +  V   ++ EA L  +          +   G D  
Sbjct: 19  LQITSGCSHNRCKFCT---FYKDARFAVSPWEEIEADLDELAASPWRYYDRIWLQGADSF 75

Query: 156 ILSHKRLQKVLKTL-RYIKHVQIL 178
           +L + RL +V +T+   +  V+ +
Sbjct: 76  VLPYDRLMRVAETIYEKLPWVKSI 99


>gi|182417560|ref|ZP_02626322.2| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237667762|ref|ZP_04527746.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
 gi|182378573|gb|EDT76101.1| conserved hypothetical protein [Clostridium butyricum 5521]
 gi|237656110|gb|EEP53666.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT
           E BL5262]
          Length = 464

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTG 151
             +++   C  +C +C     R +    +   +L   + E A   I+E   I  +    G
Sbjct: 167 AYIRIAEGCNNFCTYCIIPKIRGKFRSRKMENILKEAE-ELASQGIKELILIAQDTTMYG 225

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
            D  I   K L ++L  L  I+ ++ +R    V    P+ I  ELI  + +  K V
Sbjct: 226 SD--IYGKKNLHELLNELSKIEGIEWIR----VLYCYPEEIYDELIDEMAQNNKVV 275


>gi|17545758|ref|NP_519160.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
           GMI1000]
 gi|17428052|emb|CAD14741.1| probable molybdenum cofactor biosynthesis protein a [Ralstonia
           solanacearum GMI1000]
          Length = 373

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F ++    Q   +LS ++ E  +    E   + ++  TGG+
Sbjct: 48  ISVTDRCNFRCIYCMPKDVFDKDYRFLQHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 106

Query: 154 PLILSH-KRLQKVLKTL 169
           PL+    +RL ++L  L
Sbjct: 107 PLLRKDIERLVEMLARL 123


>gi|86150486|ref|ZP_01068711.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|85839081|gb|EAQ56345.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni
           CF93-6]
          Length = 256

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 18/129 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +  +K+   C   C +C     R +     +  +L   +   A  Y        E++ 
Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184

Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG +     L +   L K+L+ +  I  ++ +R  S    ++P +++   ++ L EA   
Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRLGS----LEPAQLDESFLEILDEAWLE 240

Query: 207 VYIAIHANH 215
            ++ I   H
Sbjct: 241 RHLHIALQH 249


>gi|126172736|ref|YP_001048885.1| radical SAM domain-containing protein [Shewanella baltica OS155]
 gi|125995941|gb|ABN60016.1| Radical SAM domain protein [Shewanella baltica OS155]
          Length = 295

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 64/162 (39%), Gaps = 25/162 (15%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           ++L++ + C    CRFC                K  +  LA  +  + +  V    GD +
Sbjct: 19  LILQVTNGCSWNQCRFCDMYTQPQKAFRAQKLDKVEQDILAVARSGAPVSRVFLADGDAM 78

Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKPVYIA 210
            L   RL+ + K + R++  V      +R+     P+ +    PE +  L+E G  +   
Sbjct: 79  SLPFARLEAICKLINRHLPQV------TRISSYCLPRNLNNKTPEQLARLRELGLSLLYV 132

Query: 211 IHANHPYEF---------SEEAIAAISRLANAG----IILLS 239
              +   E           E ++AA+ ++  AG    +++L+
Sbjct: 133 GCESGDDEVLAKIQKGETFESSLAALLKIRAAGMKSSVMILN 174


>gi|256811140|ref|YP_003128509.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
 gi|256794340|gb|ACV25009.1| Radical SAM domain protein [Methanocaldococcus fervens AG86]
          Length = 280

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           +Y   ++LK+ + C + C +C+    V ++    +  K  + A+ Y+       ++ FTG
Sbjct: 2   KY---LILKITNRCNLNCIYCY----VNNKDNKDMDFKTAKNAIDYLLSLDNKIKIQFTG 54

Query: 152 GDPLILSHKRLQKVLK 167
           G+PL L+ K ++KV+ 
Sbjct: 55  GEPL-LNFKLIEKVVD 69


>gi|219854162|ref|YP_002471284.1| hypothetical protein CKR_0819 [Clostridium kluyveri NBRC 12016]
 gi|219567886|dbj|BAH05870.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 463

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  LK+   C  +C +C             + SK+ +  +  ++  + +   E+I +G
Sbjct: 166 RTRAFLKIQDGCNRFCSYCLI-----PFARGPVCSKEPDKIIKEVKKLQVNNFKEIILSG 220

Query: 152 GDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                          L K+L+ +  IK +  +R  S    +DP+    ++I  +    K 
Sbjct: 221 IHIASYGVDISGSWNLIKILEEIDKIKGIDRVRIGS----IDPKFFTEDIINRMASLTK- 275

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 276 --LCPHF 280


>gi|153953540|ref|YP_001394305.1| oxidoreductase [Clostridium kluyveri DSM 555]
 gi|146346421|gb|EDK32957.1| Predicted oxidoreductase [Clostridium kluyveri DSM 555]
          Length = 434

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  LK+   C  +C +C             + SK+ +  +  ++  + +   E+I +G
Sbjct: 137 RTRAFLKIQDGCNRFCSYCLI-----PFARGPVCSKEPDKIIKEVKKLQVNNFKEIILSG 191

Query: 152 GDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                          L K+L+ +  IK +  +R  S    +DP+    ++I  +    K 
Sbjct: 192 IHIASYGVDISGSWNLIKILEEIDKIKGIDRVRIGS----IDPKFFTEDIINRMASLTK- 246

Query: 207 VYIAIHA 213
             +  H 
Sbjct: 247 --LCPHF 251


>gi|83952182|ref|ZP_00960914.1| radical SAM domain protein [Roseovarius nubinhibens ISM]
 gi|83837188|gb|EAP76485.1| radical SAM domain protein [Roseovarius nubinhibens ISM]
          Length = 327

 Score = 40.1 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 63/170 (37%), Gaps = 7/170 (4%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           DP       P   +   +P+ +      +C + C  C+      + +   ++  +  A L
Sbjct: 26  DPAVTAKGEPRASVPLSHPETLWFNTGTLCNITCVNCYIESSPNNDRLVYITEPEMRAYL 85

Query: 136 AYI-QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
             +      + E+ FTGG+P  ++ +        L     V IL    R P++    +  
Sbjct: 86  DELTARNWPVREIAFTGGEPF-MNPEMCAMARTALARGYEVLILTNAMR-PMMRKS-VQA 142

Query: 195 ELIQCLKEAGKPVYIAIHANHP-YEFSEEAI--AAISRLANAGIILLSQS 241
           EL   + + G  + + I  +H   E  ++     A +R  +  I L  Q 
Sbjct: 143 ELAALIADYGPRLTLRISLDHWSEEMHDQMRGKQAFARTLDGMIWLRDQG 192


>gi|298383745|ref|ZP_06993306.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
 gi|298263349|gb|EFI06212.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
          Length = 443

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C        +      +   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTVASMVEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  + +     
Sbjct: 205 IGDFGKTTGETFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSRSRR---FM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|239625860|ref|ZP_04668891.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239520090|gb|EEQ59956.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 353

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 3/84 (3%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + CR+C    +    +  +LS ++ E A+A       I  +  TGG+PL+  
Sbjct: 14  ISITDRCNLRCRYCMPNGVESLARSEILSLEEIE-AIAICAASLGISRIKVTGGEPLVRR 72

Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182
                +++K L+ I  ++ +   +
Sbjct: 73  DC--CQLVKLLKSIPGIEKVTITT 94


>gi|193213822|ref|YP_001995021.1| radical SAM domain-containing protein [Chloroherpeton thalassium
           ATCC 35110]
 gi|193087299|gb|ACF12574.1| Radical SAM domain protein [Chloroherpeton thalassium ATCC 35110]
          Length = 403

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 15/107 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L+   +C +YC  C+R     ++K +  S    +  L   Q+      +   GGDPL+  
Sbjct: 26  LEPTALCNLYCDGCYRM----NEKDSHKSLDVVKQELDTFQKLRNSDCISIAGGDPLLHP 81

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAG 204
                ++L  +  +K     R   +  +  + + +  EL++ LK+AG
Sbjct: 82  -----QILDIVADVK-----RRGLKPIVNTNGKALTMELLKDLKKAG 118


>gi|29347563|ref|NP_811066.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|253572024|ref|ZP_04849428.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|29339463|gb|AAO77260.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron
           VPI-5482]
 gi|251838204|gb|EES66291.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 443

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C        +      +   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTVASMVEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  + +     
Sbjct: 205 IGDFGKTTGETFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSRSRR---FM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|326554660|gb|ADZ89299.1| coproporphyrinogen III oxidase [Brucella melitensis M5-90]
          Length = 458

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
            D  L   +  C   C +C           T ++ KD +  L Y+     +I        
Sbjct: 54  QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 104

Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
                 E+ F GG P I+    L  ++  LR        R       +    +DP+R+ P
Sbjct: 105 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 157

Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           E+   L  +G     + +       F  +   AI+R+  A   L
Sbjct: 158 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 196


>gi|283853643|ref|ZP_06370877.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio sp. FW1012B]
 gi|283570976|gb|EFC19002.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio sp. FW1012B]
          Length = 432

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 19/179 (10%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              EL+ILP    + +G     P   +    P    LK+   C   CR+C    + G   
Sbjct: 105 LPTELDILPGRLAEALGAEAADPTGRLASTPPSYAYLKIAEGCDHACRYCTIPSIRGGLV 164

Query: 123 GTVLSS--KDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
              L    ++    L   +  S++     +V   G D L L    LQ +L+ L  +  ++
Sbjct: 165 SRPLPGLVEEARGLLD--RGVSELVVVAQDVTAYGRD-LGLKDG-LQALLEKLLPLSGLK 220

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISRLANA 233
            LR       + P  +   L+  L  AG+P   Y  I   H      E +AA++R   A
Sbjct: 221 WLRL----LYLYPSGVTDGLLSFLAGAGRPFVPYFDIPFQH---VHPEMLAAMARPKAA 272


>gi|225686939|ref|YP_002734911.1| coproporphyrinogen III oxidase [Brucella melitensis ATCC 23457]
 gi|256042927|ref|ZP_05445873.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|256261920|ref|ZP_05464452.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 2 str. 63/9]
 gi|265989360|ref|ZP_06101917.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|225643044|gb|ACO02957.1| oxygen-independent coproporphyrinogen III oxidase [Brucella
           melitensis ATCC 23457]
 gi|263000029|gb|EEZ12719.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|263091400|gb|EEZ15936.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           melitensis bv. 2 str. 63/9]
 gi|326411370|gb|ADZ68434.1| coproporphyrinogen III oxidase [Brucella melitensis M28]
          Length = 450

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
            D  L   +  C   C +C           T ++ KD +  L Y+     +I        
Sbjct: 46  QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 96

Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
                 E+ F GG P I+    L  ++  LR        R       +    +DP+R+ P
Sbjct: 97  RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 149

Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           E+   L  +G     + +       F  +   AI+R+  A   L
Sbjct: 150 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 188


>gi|21227624|ref|NP_633546.1| Fe-S oxidoreductase [Methanosarcina mazei Go1]
 gi|20906012|gb|AAM31218.1| Fe-S oxidoreductase [Methanosarcina mazei Go1]
          Length = 374

 Score = 40.1 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 1/108 (0%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R  +++   CP  C++C    + G +          + A  Y   +         G D +
Sbjct: 143 RAPIEISRGCPWGCKYCQTPRLFGREVRHRSIDSILKNAQHYNDLRFIASNAFAYGSDGI 202

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                +++K+L  L  +   +I  F +    V P+ +  E ++ +++ 
Sbjct: 203 HPRFDKVEKLLSALHKLPDKKIF-FGTFPSEVRPEFVTEESVELVRKY 249


>gi|291166609|gb|EFE28655.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Filifactor alocis ATCC
           35896]
          Length = 483

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 63/151 (41%), Gaps = 21/151 (13%)

Query: 65  EELNILPEEREDPIGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
           ++L     +  D + D +   ++G+    ++  +  + +++ C  +C +C     +    
Sbjct: 153 QQLTSNAGQLID-VWDIDGQIIEGLPTTRKFDVKSFVNIMYGCNNFCTYC-----IVPYT 206

Query: 123 GTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKH 174
                S++ +  L  I+      I E+   G + +    K L++      +L+ +  I  
Sbjct: 207 RGRERSREPKDILDEIRFLANEGIKEITLLGQN-VNSYGKTLEQNYTFADLLRDVNDIDG 265

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           ++ +RF S      P+ ++ ELI  + E  K
Sbjct: 266 IERIRFMSSH----PKDLSDELIDAMAELPK 292


>gi|225570522|ref|ZP_03779547.1| hypothetical protein CLOHYLEM_06624 [Clostridium hylemonae DSM
           15053]
 gi|225160719|gb|EEG73338.1| hypothetical protein CLOHYLEM_06624 [Clostridium hylemonae DSM
           15053]
          Length = 441

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 25/166 (15%)

Query: 64  KEELNILPE-ERED----PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118
           KE L   P  E ED    P+ ++      G  + Y     LK+   C  +C +C   ++ 
Sbjct: 113 KEALEGHPCMEMEDIDVLPLVESKRLVTTGGHYAY-----LKIAEGCDKHCTYCIIPKIR 167

Query: 119 GSQKGTVLSS--KDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           G+ +   +    K+ EA     Q   ++     E    G D  I   K L ++L+ L  I
Sbjct: 168 GNFRSVPMERLVKEAEALAE--QGVKELILVAQETTLYGKD--IYGEKSLHRLLRKLCGI 223

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPY 217
           + ++ +R         P+ I  ELIQ +KE  K   Y+ +   H  
Sbjct: 224 EGLRWIRI----LYCYPEEIYDELIQVIKEEKKICHYLDLPIQHAN 265


>gi|155241764|gb|ABT18046.1| heme d1 biosynthesis protein [Heliobacillus mobilis]
          Length = 331

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 16/106 (15%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
             + C ++C  C+R    G++    LS+ + +  L  I + +    +IF+GG+PL+    
Sbjct: 7   TTNQCNMFCDHCYRDA--GAKAEQELSTVEGKQLLDEIAK-AGFKIMIFSGGEPLMRPD- 62

Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204
                +  L      + LR  F +   +     I  E+ + LK+AG
Sbjct: 63  -----IVELVAYATSKGLRSVFGTNGTL-----ITREMARDLKKAG 98


>gi|53715679|ref|YP_101671.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
 gi|52218544|dbj|BAD51137.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
          Length = 479

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 14/96 (14%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVL---SSKDTEAALAYIQE---------KSQI 144
           +L+++   C + C++C   E   +         +  + +  + Y+            +  
Sbjct: 84  LLIEVTDKCNLKCKYCGYGEFYSNYDRRETCNQTFDNVKVLIDYLANLWRSDYNVSHNNT 143

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             V F GG+PL L+ K +Q+ +  +  + H+  LRF
Sbjct: 144 VTVGFYGGEPL-LNMKLIQETIAYIESL-HIDNLRF 177


>gi|317121910|ref|YP_004101913.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermaerobacter
           marianensis DSM 12885]
 gi|315591890|gb|ADU51186.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermaerobacter
           marianensis DSM 12885]
          Length = 517

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 12/151 (7%)

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFC----FR 114
           +PQ  E     E     +       ++ +  R     +  + +++ C  YC FC     R
Sbjct: 165 LPQLIERVRREEGMVVDVWQAAEGVVEHLPSRRAGGVKAWVNIIYGCDKYCTFCIVPTTR 224

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
                 +   V++  +  AA  Y +       V   G D           +L  L  +  
Sbjct: 225 GRERSRRPEDVIAEVEYLAAEGYKEVTLLGQNVNSYGKDLGTGFD--FADLLARLDRVPG 282

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           ++ +R+ +      P+    +LI+ + E+ K
Sbjct: 283 IRWIRYTTSH----PRDFTDKLIRTIAESDK 309


>gi|296157337|ref|ZP_06840173.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. Ch1-1]
 gi|295892673|gb|EFG72455.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. Ch1-1]
          Length = 457

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 20/128 (15%), Positives = 42/128 (32%), Gaps = 21/128 (16%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153
              + ++  C  YC +C     V         S+  +  L  I       + EV   G +
Sbjct: 148 TAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQN 202

Query: 154 ------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                  L L    +     +++ +  I  ++ +R+ +      P+     LI    +  
Sbjct: 203 VNAYRGGLTLGSSEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQRLIDTYAKVP 258

Query: 205 KPVYIAIH 212
           K +   +H
Sbjct: 259 K-LVSHLH 265


>gi|256112100|ref|ZP_05453036.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|265993540|ref|ZP_06106097.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
 gi|262764410|gb|EEZ10442.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str.
           Ether]
          Length = 450

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
            D  L   +  C   C +C           T ++ KD +  L Y+     +I        
Sbjct: 46  QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 96

Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
                 E+ F GG P I+    L  ++  LR        R       +    +DP+R+ P
Sbjct: 97  RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 149

Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           E+   L  +G     + +       F  +   AI+R+  A   L
Sbjct: 150 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 188


>gi|48478258|ref|YP_023964.1| molybdenum cofactor biosynthesis protein A [Picrophilus torridus
           DSM 9790]
 gi|48430906|gb|AAT43771.1| molybdenum cofactor biosynthesis protein A [Picrophilus torridus
           DSM 9790]
          Length = 611

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 35/168 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQI--WEVIFTGGDP 154
           + + + C + C +CF       +   +   S       L  ++ +  +    V  TGG+P
Sbjct: 152 IVVTNRCDLSCWYCF---FYAKENEPIYEPSLDQIRMMLRRMRNEKPVGANAVQITGGEP 208

Query: 155 LILSHKRLQKV-LKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
             +    L+ + +       HVQ+    +R          +  +P+ ++ ++EAG  V I
Sbjct: 209 -TMRDDILEVIKIAREEGYDHVQLNTNSIR----------EAYDPDFVRKVREAGSNV-I 256

Query: 210 AIHA------NHPYEFSEEAIAAISRLANA--GIILLSQSVLLKGIND 249
                     ++P  F  E  AA+     A  G++L+    ++ GIND
Sbjct: 257 YTSFDGPTPRSNPKNF-WEIPAALENYRKAPLGVVLV--PTVIGGIND 301


>gi|189500918|ref|YP_001960388.1| MiaB-like tRNA modifying enzyme [Chlorobium phaeobacteroides BS1]
 gi|189496359|gb|ACE04907.1| MiaB-like tRNA modifying enzyme [Chlorobium phaeobacteroides BS1]
          Length = 451

 Score = 40.1 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 45/233 (19%), Positives = 87/233 (37%), Gaps = 39/233 (16%)

Query: 22  KEQIDEIKEISNHYS---IALTPVIANL-------INPHNPNDPIARQFIPQKEELNILP 71
           ++   +I+++   Y    IA+T   A +       I+  +    +  ++IP+K   ++  
Sbjct: 61  QKSRQQIRKMIKKYPLSRIAVTGCYAQMYPDSVETIDGVHVILGVREKYIPEKYIKDVQE 120

Query: 72  E-EREDPIGDN--NHSPLKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQK--- 122
              RE    +   +  P   ++ +      R  LK+   C   C +C      G  +   
Sbjct: 121 AVYREVASPETIKDAEPAHSLIEKREKGRTRAFLKIQDGCDYACAYCTIPLARGKSRSVP 180

Query: 123 -GTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQIL 178
             TVL+     A   Y        E++ TG    D     +  +  +L+ L  +  V  +
Sbjct: 181 LETVLAGAVRLAEAGY-------REIVLTGVNIADYRSGRNTFVDLLLE-LESVD-VSRI 231

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231
           R  S    ++P  ++  LI  +  + K   I  H + P +   +AI A  R  
Sbjct: 232 RISS----IEPDILSDRLIDTVASSSK---IMPHFHLPLQSGSDAILAAMRRR 277


>gi|255528303|ref|ZP_05395115.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium carboxidivorans P7]
 gi|255508005|gb|EET84433.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium carboxidivorans P7]
          Length = 171

 Score = 40.1 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 5/60 (8%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R+L      C   C+ CF         G  L  +D +  L  I++   +  V F+GGDP 
Sbjct: 25  RVLF--SQGCKHNCKGCF-NPSTHCYDGGEL--RDMDELLDDIRKNPMLKGVTFSGGDPF 79


>gi|120611327|ref|YP_971005.1| molybdenum cofactor biosynthesis protein A [Acidovorax citrulli
           AAC00-1]
 gi|120589791|gb|ABM33231.1| GTP cyclohydrolase subunit MoaA [Acidovorax citrulli AAC00-1]
          Length = 386

 Score = 40.1 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G        G +LS ++             + ++  TGG+
Sbjct: 51  ISVTDRCNFRCSYCMPKEVFGKDYPYLSHGDLLSFEEITRLARVFLAH-GVRKIRLTGGE 109

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   + L+ +++ L  +
Sbjct: 110 PLL--RRHLENLVEQLAGL 126


>gi|317010566|gb|ADU84313.1| hypothetical protein HPSA_01445 [Helicobacter pylori SouthAfrica7]
          Length = 418

 Score = 40.1 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C     V  +  +    K  E     +     + EV+ TG +
Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCNKGVQEVVLTGTN 189

Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
                  +   + +++K L  I  ++ +R  S
Sbjct: 190 VGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|225568730|ref|ZP_03777755.1| hypothetical protein CLOHYLEM_04809 [Clostridium hylemonae DSM
           15053]
 gi|225162229|gb|EEG74848.1| hypothetical protein CLOHYLEM_04809 [Clostridium hylemonae DSM
           15053]
          Length = 427

 Score = 40.1 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 50/125 (40%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  +K+   C  +C +C     +       + S+  E+ LA ++  ++    EV+ TG
Sbjct: 141 HTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRKRESVLAEVRRLAEGGYKEVVLTG 195

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                  + +   L ++++ +     ++ +R  S    ++P+ +  E  Q L    K   
Sbjct: 196 IHLSSYGVDTGDDLLRLIEAVHGTDGIERIRLGS----LEPRIVTEEFAQALAGLPK--- 248

Query: 209 IAIHA 213
           I  H 
Sbjct: 249 ICPHF 253


>gi|254479101|ref|ZP_05092453.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Carboxydibrachium
           pacificum DSM 12653]
 gi|214034950|gb|EEB75672.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Carboxydibrachium
           pacificum DSM 12653]
          Length = 436

 Score = 40.1 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 30/175 (17%)

Query: 59  QFIPQKEELN----ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           Q +   EE+     +L     D + D     +  I+   P    LK+   C   C FC  
Sbjct: 107 QIVDVIEEVKKGKKVLKYGHPDLLNDEG---IPRILTTPPYYAYLKIAEGCSNACSFCII 163

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP----------LILSHKRLQK 164
            ++ G  K   +     E A      +  + E+I    D           L+L      +
Sbjct: 164 PKLRGKYKSRKM-ENIIEEAQE--LARKGVKELIIIAQDTTKYGIDLYKKLMLP-----Q 215

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYE 218
           +L+ L  I+ ++ +R         P  +  ELI+ +K   K V YI I   H  E
Sbjct: 216 LLRELSKIEELKWIRL----LYAYPDSVTDELIEEIKNNEKIVKYIDIPLQHSSE 266


>gi|217076998|ref|YP_002334714.1| Fe-S oxidoreductase [Thermosipho africanus TCF52B]
 gi|217036851|gb|ACJ75373.1| Fe-S oxidoreductase [Thermosipho africanus TCF52B]
          Length = 429

 Score = 40.1 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 16/126 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C  R   G++  +          L  +       E++ TG  
Sbjct: 136 RTRAFIKVQDGCTNTCSYCAIRFARGNKIRSKPVDLVVSEVLRLV--NKDYKEIVITG-- 191

Query: 154 PLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
            L L          L ++L++L  IK    +R  S    ++P+ ++ ELI  +    K +
Sbjct: 192 -LNLGKFGKDIDSSLHELLRSLVKIKGDFRIRLSS----INPEDLDEELISLIGAEEK-I 245

Query: 208 YIAIHA 213
              +H 
Sbjct: 246 CNHLHI 251


>gi|167042814|gb|ABZ07532.1| putative TatD related DNase [uncultured marine microorganism
           HF4000_ANIW137I15]
          Length = 482

 Score = 40.1 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 16/129 (12%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEK 141
           +P+  IV++    + L L + C   C +C R   + +G     +    D +     ++  
Sbjct: 281 NPVPQIVYKMHGALHLNLTYTCTNNCFYCPRFSSDYLGGHNLKLDRDPDPDEIWEALKAF 340

Query: 142 SQIWE-VIFTG-GDPLILSHKRLQKVLKTLRYI-KHVQILR------FHSRVPIVDPQRI 192
             I + V F+G G+PL L    L+++   ++     V++L        H R   V P+  
Sbjct: 341 GDIRQLVTFSGYGEPL-LRLDVLKEIAGRIKEAGGTVRVLTNGQGNLIHGR--NVLPE-- 395

Query: 193 NPELIQCLK 201
              L+  L+
Sbjct: 396 LQGLVDQLR 404


>gi|152992903|ref|YP_001358624.1| type II restriction-modification enzyme, R and M protein
           [Sulfurovum sp. NBC37-1]
 gi|151424764|dbj|BAF72267.1| type II restriction-modification enzyme, R and M protein
           [Sulfurovum sp. NBC37-1]
          Length = 1232

 Score = 40.1 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 15/78 (19%)

Query: 271 LHHPDLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
           L   D A G+ HF ++ +    +I + L+           + D  G   K          
Sbjct: 521 LSICDPAVGSGHFLVSSLNTILEIKSQLR----------ILFDAEGKRIK----DDYELS 566

Query: 330 VGNGSYCITDHHNIVHDY 347
           V N    + D    + +Y
Sbjct: 567 VENDELIVRDDEGEIFEY 584


>gi|320352216|ref|YP_004193555.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320120718|gb|ADW16264.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 335

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 66/185 (35%), Gaps = 24/185 (12%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWE---VIFTGGD 153
           +      CP  C FC +R + G     V S+   E    ++ + +    E   V   GG 
Sbjct: 7   IFIPHEGCPHRCIFCDQRRISGQVAPPVDSNGVAETIRVWLARSRPDRRERVQVALYGGS 66

Query: 154 PLILSHKRLQKVL---KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-I 209
              L  +R +++L   +  R    VQ +R  +R     P  I+   +  L+E G  +  +
Sbjct: 67  FTGLPVERQRELLAAVQPFRRHGLVQEIRLSTR-----PDLIDSGRLDLLEEYGVSIVEL 121

Query: 210 AIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRT 260
              +                    A  +L   G  L  Q +L L G  D   IL   + T
Sbjct: 122 GAQSCDDRVLRLAGRGHGGAAVEDAARQLRERGFGLGIQLMLGLPG--DSFRILRQTVAT 179

Query: 261 FVELR 265
            V LR
Sbjct: 180 VVSLR 184


>gi|295697188|ref|YP_003590426.1| molybdenum cofactor biosynthesis protein A [Bacillus tusciae DSM
           2912]
 gi|295412790|gb|ADG07282.1| molybdenum cofactor biosynthesis protein A [Bacillus tusciae DSM
           2912]
          Length = 344

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 5/89 (5%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           G VH Y   + + +   C + C +C     V   +   L + +    +  +  +  +  +
Sbjct: 21  GRVHDY---LRISVTDRCNLRCLYCMPAHGVQFMESRRLMTYEEIVTVVRVAARLGVKRL 77

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
             TGG+PL+     + ++++ L  I  ++
Sbjct: 78  RITGGEPLVRPD--IDRLIEALGAIPGIE 104


>gi|291536277|emb|CBL09389.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis
           M50/1]
          Length = 496

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 18/134 (13%), Positives = 55/134 (41%), Gaps = 23/134 (17%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +  +Y  +  + ++  C  +C +C    + G ++      K+    +  +     + E++
Sbjct: 199 VERKYSFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--KEIIREIERLAAD-GVVEIM 255

Query: 149 FTGGD----------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
             G +          P+        ++L+ +  +  ++ +RF +      P+ ++ +LI+
Sbjct: 256 LLGQNVNSYGKNLEQPMTF-----AQLLQEIEKVDGIERIRFMTSH----PKDLSDDLIE 306

Query: 199 CLKEAGKPVYIAIH 212
            +K + K +   +H
Sbjct: 307 VMKNS-KKICKHLH 319


>gi|169830380|ref|YP_001716362.1| radical SAM domain-containing protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169637224|gb|ACA58730.1| Radical SAM domain protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 370

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 11/118 (9%)

Query: 61  IPQKEE---LNILPEEREDPIGDNNHSPLKG----IVHRYPDRILLKLLHVCPVYCRFCF 113
           +P +EE   L    +   D +     +   G     VH    R +++  + C   C +C 
Sbjct: 39  VPTREEIVALLTAGDADTDALYRAADAVRAGHVGDTVHL---RAIIEFSNHCVQNCLYCG 95

Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
            R          +S  +  AA A  +++     V+ +G DP       L +++  L+ 
Sbjct: 96  LRRNNRRLFRYRMSPDEIFAAAAVARDQGYRTVVLQSGEDPGY-PTSELARLVHRLKD 152


>gi|160933769|ref|ZP_02081157.1| hypothetical protein CLOLEP_02630 [Clostridium leptum DSM 753]
 gi|156867646|gb|EDO61018.1| hypothetical protein CLOLEP_02630 [Clostridium leptum DSM 753]
          Length = 429

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 23/150 (15%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMV 118
           ++ E+ I P   +D         +     R   R  LK+   C  +C +C     R  + 
Sbjct: 115 RRREVKIRPYTGKDSF---ESLQIHSFQER--TRAFLKIQDGCNRFCSYCIIPYSRGRVR 169

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-PLILSHKRLQKV--LKTLRYIKHV 175
                 +     T AA  Y        E++ TG +         L     ++ +  +  V
Sbjct: 170 SKPLEELTREARTLAASGY-------REIVLTGINLSCYGQDSGLGLWDAVEAVCGLPEV 222

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           + +R  S    ++P+++   +++ L    K
Sbjct: 223 ERVRLGS----LEPEQMELPVLERLARQEK 248


>gi|222480620|ref|YP_002566857.1| MiaB-like tRNA modifying enzyme [Halorubrum lacusprofundi ATCC
           49239]
 gi|222453522|gb|ACM57787.1| MiaB-like tRNA modifying enzyme [Halorubrum lacusprofundi ATCC
           49239]
          Length = 434

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           +L +   C   C +C  +     +  +    ++ E A A +   +   E+  TG D  + 
Sbjct: 126 ILPIARGCMSNCSYCITK-FATGRVDSPTVEENVEKARALV--HAGAKEIRVTGQDTGVY 182

Query: 158 S----HKRLQKVLKTLRYIKHVQILRFH 181
                 ++L ++L  +  I     +R  
Sbjct: 183 GWDNGDRKLPELLDRICDIDGDFRVRLG 210


>gi|118444753|ref|YP_878562.1| MiaB-like tRNA modifying enzyme [Clostridium novyi NT]
 gi|118135209|gb|ABK62253.1| MiaB-like tRNA modifying enzyme [Clostridium novyi NT]
          Length = 433

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 25/130 (19%)

Query: 94  PDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
             R  LK+   C  +C +C   F R  V S+   ++     +     +       E+I +
Sbjct: 141 KTRAFLKIQDGCNNFCSYCLIPFARGAVCSKNPEII----IDEVKK-LAAH-GFKEIILS 194

Query: 151 GGDPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--QCLKEA 203
           G D             L  +LK +  I  +  +R  S         I PE      +KE 
Sbjct: 195 GIDISSYGVDLEGDWNLLTILKKIDEIDGITRVRIGS---------IGPEFFNEDRIKEI 245

Query: 204 GKPVYIAIHA 213
           GK   +  H 
Sbjct: 246 GKLKKLCPHF 255


>gi|167040005|ref|YP_001662990.1| radical SAM domain-containing protein [Thermoanaerobacter sp. X514]
 gi|300914096|ref|ZP_07131412.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307724670|ref|YP_003904421.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513]
 gi|166854245|gb|ABY92654.1| Radical SAM domain protein [Thermoanaerobacter sp. X514]
 gi|300889031|gb|EFK84177.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307581731|gb|ADN55130.1| Radical SAM domain protein [Thermoanaerobacter sp. X513]
          Length = 460

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 37/77 (48%), Gaps = 2/77 (2%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157
           +   + C + C++C+      +Q   +++ +  E    +I+    ++  ++F GG+PL L
Sbjct: 86  IHTSNECNLKCKYCYANHGDYNQGQAIMTEEIAEKVADFIKLNFPKVKVIVFFGGEPL-L 144

Query: 158 SHKRLQKVLKTLRYIKH 174
             K + K+ + +    H
Sbjct: 145 GFKAIGKICEKMGKETH 161


>gi|167037358|ref|YP_001664936.1| radical SAM domain-containing protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|320115773|ref|YP_004185932.1| Radical SAM domain-containing protein [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166856192|gb|ABY94600.1| Radical SAM domain protein [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|319928864|gb|ADV79549.1| Radical SAM domain protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
          Length = 460

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 37/77 (48%), Gaps = 2/77 (2%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157
           +   + C + C++C+      +Q   +++ +  E    +I+    ++  ++F GG+PL L
Sbjct: 86  IHTSNECNLKCKYCYANHGDYNQGQAIMTEEIAEKVADFIKLNFPKVKVIVFFGGEPL-L 144

Query: 158 SHKRLQKVLKTLRYIKH 174
             K + K+ + +    H
Sbjct: 145 GFKAIGKICEKMGKETH 161


>gi|189345895|ref|YP_001942424.1| RNA modification enzyme, MiaB family [Chlorobium limicola DSM 245]
 gi|189340042|gb|ACD89445.1| RNA modification enzyme, MiaB family [Chlorobium limicola DSM 245]
          Length = 458

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 16/140 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C   C +C      G  +   L S++  A    +   S   E++ TG  
Sbjct: 155 RTRAFLKIQDGCDYACAYCTIPHARG--RSRSLPSEELVARARSL-AFSGYREIVLTGVN 211

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD        L  +L+ L  +  V  +R  S    ++P  ++ ELI+ +  + K   I 
Sbjct: 212 IGD-YRGHASGLVGLLRMLEDV-SVDRIRISS----LEPDILDDELIETVAASKK---IT 262

Query: 211 IHANHPYEFSEEAI-AAISR 229
            H + P +   ++I  A+ R
Sbjct: 263 PHFHVPLQSGSDSILKAMRR 282


>gi|218128607|ref|ZP_03457411.1| hypothetical protein BACEGG_00177 [Bacteroides eggerthii DSM 20697]
 gi|317475589|ref|ZP_07934851.1| MiaB-like tRNA modifying enzyme [Bacteroides eggerthii 1_2_48FAA]
 gi|217989209|gb|EEC55523.1| hypothetical protein BACEGG_00177 [Bacteroides eggerthii DSM 20697]
 gi|316908293|gb|EFV29985.1| MiaB-like tRNA modifying enzyme [Bacteroides eggerthii 1_2_48FAA]
          Length = 443

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 14/140 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  YC +C        +      +   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYYCSYCTI-PFARGRSRNGSVASLVEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  + +     
Sbjct: 205 IGDFGKTTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEFVSRSKR---FM 257

Query: 211 IHANHP-YEFSEEAIAAISR 229
            H + P    S+E +  + R
Sbjct: 258 PHFHIPLQSGSDEVLKLMRR 277


>gi|297583836|ref|YP_003699616.1| radical SAM domain-containing protein [Bacillus selenitireducens
           MLS10]
 gi|297142293|gb|ADH99050.1| Radical SAM domain protein [Bacillus selenitireducens MLS10]
          Length = 378

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ +L   C + C  C R E   ++    LS  + +A +   ++ +    ++FTGGD
Sbjct: 11  PFIVIWELTRACELKCLHC-RAEAQYTRDPRELSFDEGKALIDTFKDMNNPM-LVFTGGD 68

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
           PL+         +  +      + +R  S  P   P  +  E ++  KE G   +     
Sbjct: 69  PLMRED------VFDIASYAISRGIRV-SMTPSATPN-VTLEAMKKAKEVGLSRWAFSLD 120

Query: 209 -----IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                I  H       Y+ + +   AIS L    + +   +V+ +   D  + +A  +  
Sbjct: 121 GPNAAIHDHFRGTEGSYQLTTD---AISYLHELELPVQINTVISRYNIDCLDEMAAKVEE 177

Query: 261 F 261
            
Sbjct: 178 L 178


>gi|14591248|ref|NP_143325.1| hypothetical protein PH1458 [Pyrococcus horikoshii OT3]
 gi|3257882|dbj|BAA30565.1| 587aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 587

 Score = 40.1 bits (93), Expect = 0.51,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 31/176 (17%)

Query: 91  HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ----EKS-QI 144
           HR    ++ + L + C + C +CF      +++G  +     E     ++    E     
Sbjct: 134 HRSHTSLINIVLTNRCNLSCWYCF----FYAREGEPIYEPTLEQIRMMLRNAKKEHPIGA 189

Query: 145 WEVIFTGGDPLILSHKRLQKV-LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
             V FTGG+P  L    ++ + +       H+Q+     ++        +PEL++ L+EA
Sbjct: 190 NAVQFTGGEP-TLRDDLIEIIKIAKEEGYDHIQLNTDGIKL------AFDPELVKKLREA 242

Query: 204 GKPVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           G       +          NH  E        + +    GI+L+    L++ IND 
Sbjct: 243 GVNTLYLSYDGMTPQTNWKNHW-EI-PLIFENVRKAGGPGIVLV--PTLIRNINDH 294


>gi|329963574|ref|ZP_08301053.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides
           fluxus YIT 12057]
 gi|328528563|gb|EGF55534.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides
           fluxus YIT 12057]
          Length = 432

 Score = 40.1 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFT 150
             LK+   C   C +C    + G  K      ++    + Y+        +    E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--KHVSRPMEEILDEVRYLVAGGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G D  +   + L ++++ +  I  V+ +R H       P     +L + ++E   
Sbjct: 196 GVD--LYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPEDLFRVMRERPN 244


>gi|319759064|gb|ADV71006.1| metallo cofactor biosynthesis protein [Streptococcus suis JS14]
          Length = 413

 Score = 40.1 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           YP +I+++L + C + C  CF+    G      L  ++    L   + K +++E+  TGG
Sbjct: 100 YPRKIVIELTNKCHLQCTHCFKEA--GPINRNFLKYEELINFLD--RVKGKVYEIQLTGG 155

Query: 153 DPLILS 158
           +P+   
Sbjct: 156 EPMAHP 161


>gi|291288343|ref|YP_003505159.1| molybdenum cofactor biosynthesis protein A [Denitrovibrio
           acetiphilus DSM 12809]
 gi|290885503|gb|ADD69203.1| molybdenum cofactor biosynthesis protein A [Denitrovibrio
           acetiphilus DSM 12809]
          Length = 332

 Score = 40.1 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 65/164 (39%), Gaps = 22/164 (13%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C   C++C    +    Q   +LS ++   A+        + +V  TGG+PL+ 
Sbjct: 21  VSVTDRCNFRCKYCMPTTDFKCLQHENILSYEELLFAVDVFCS-LGVKKVRVTGGEPLV- 78

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
             K +   L+ L  ++ ++ +   +         +  E  + +K AG    + +  +   
Sbjct: 79  -RKGIGSFLEGLGKMEKLEEVTLTTNG------ALLKEFTEQIKSAGIQ-RVNVSLDSLQ 130

Query: 218 E-----FSEEAI-----AAISRLANAGI-ILLSQSVLLKGINDD 250
           E      +          +I  +  AGI  + +  V++KG NDD
Sbjct: 131 EERYKDITGGFKLEKIIDSIKHVQRAGIGPVKTNMVVIKGYNDD 174


>gi|156937491|ref|YP_001435287.1| radical SAM domain-containing protein [Ignicoccus hospitalis
           KIN4/I]
 gi|156566475|gb|ABU81880.1| Radical SAM domain protein [Ignicoccus hospitalis KIN4/I]
          Length = 352

 Score = 40.1 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 20/161 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C FC   E  G      LS  D +  +A    +  +  V FTGG+PL+ S
Sbjct: 15  VSVTERCNFNCIFCH-SEGAGRGSFDELSVNDYD-MIAEATSRLGLKYVKFTGGEPLLRS 72

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA---N 214
              L++++ + +     + +   +   +  P+R      + LKEAG   + +++H+    
Sbjct: 73  D--LEEIIHSFKEHGFEE-ISITTNGFL-LPER-----TEGLKEAGVSWINVSLHSLKRQ 123

Query: 215 HPYEFSEE-----AIAAISRLANAGIILLSQSVLLKGINDD 250
                +        +  I +    GI +    V+L+GIN+D
Sbjct: 124 RFRRITGVDALNRVLNGIEKALENGIEVRVNVVVLRGINED 164


>gi|146319650|ref|YP_001199362.1| metallo cofactor biosynthesis protein [Streptococcus suis 05ZYH33]
 gi|146321848|ref|YP_001201559.1| metallo cofactor biosynthesis protein [Streptococcus suis 98HAH33]
 gi|253752648|ref|YP_003025789.1| radical SAM superfamily protein [Streptococcus suis SC84]
 gi|253754474|ref|YP_003027615.1| radical SAM superfamily protein [Streptococcus suis P1/7]
 gi|253756407|ref|YP_003029547.1| radical SAM superfamily protein [Streptococcus suis BM407]
 gi|145690456|gb|ABP90962.1| metallo cofactor biosynthesis protein [Streptococcus suis 05ZYH33]
 gi|145692654|gb|ABP93159.1| metallo cofactor biosynthesis protein [Streptococcus suis 98HAH33]
 gi|251816937|emb|CAZ52586.1| radical SAM superfamily protein [Streptococcus suis SC84]
 gi|251818871|emb|CAZ56714.1| radical SAM superfamily protein [Streptococcus suis BM407]
 gi|251820720|emb|CAR47482.1| radical SAM superfamily protein [Streptococcus suis P1/7]
 gi|292559267|gb|ADE32268.1| metallo cofactor biosynthesis protein [Streptococcus suis GZ1]
          Length = 415

 Score = 40.1 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           YP +I+++L + C + C  CF+    G      L  ++    L   + K +++E+  TGG
Sbjct: 102 YPRKIVIELTNKCHLQCTHCFKEA--GPINRNFLKYEELINFLD--RVKGKVYEIQLTGG 157

Query: 153 DPLILS 158
           +P+   
Sbjct: 158 EPMAHP 163


>gi|76802239|ref|YP_327247.1| hypothetical protein NP3198A [Natronomonas pharaonis DSM 2160]
 gi|76558104|emb|CAI49690.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160]
          Length = 414

 Score = 40.1 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           +L +   C   C +C  +     +  +   +++ E A A +   +   E+  TG D  + 
Sbjct: 124 ILPIARGCMSNCSYCITK-FATGRVDSPPVAENVEKARALV--HAGAKELRITGQDTGVY 180

Query: 158 SHK----RLQKVLKTLRYIKHVQILRFH 181
                  +L ++L  +  I     +R  
Sbjct: 181 GWDTGERKLPELLDRICDIDGEFRVRLG 208


>gi|291522428|emb|CBK80721.1| SSU ribosomal protein S12P methylthiotransferase [Coprococcus catus
           GD/7]
          Length = 454

 Score = 40.1 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 9/111 (8%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           LK+   C  +C +C   ++ GS +      ++   ++ AA    +      E    G D 
Sbjct: 156 LKIAEGCDKHCTYCIIPKLRGSYRSHSMDYLIKQAESLAAQGVKELNIVAQETTVYGTD- 214

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           L    K L ++LK L  I+ +  +R    V    P+ IN ELIQ +KE  K
Sbjct: 215 LYNGQKMLPELLKRLCRIEGLSWIR----VLYCYPEEINEELIQVIKEEPK 261


>gi|290968565|ref|ZP_06560103.1| MiaB-like protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290781218|gb|EFD93808.1| MiaB-like protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 440

 Score = 40.1 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 20/148 (13%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
              D   +    P   + H    R  LK+   C  +C +C     +       L S+  +
Sbjct: 129 HSPDEFEEIPLYPAA-VTH---TRADLKIQEGCNNFCTYC-----IIPYTRGKLKSRRPD 179

Query: 133 AALAYIQEKSQ--IWEVIFTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           A +   +   +    E++ TG         +     L  +L+ L     V  LR  S   
Sbjct: 180 AIVEEAKRLVEAGFKELVLTGIHLGAYGKELAEKPTLAHILRRLVEETDVLRLRLGS--- 236

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHA 213
            +D   ++ +LI+ + EA + +   +H 
Sbjct: 237 -IDSLEVDDDLIRIINEAEQRICPHLHI 263


>gi|282858353|ref|ZP_06267533.1| translation initiation factor IF-1 [Prevotella bivia JCVIHMP010]
 gi|282588801|gb|EFB93926.1| translation initiation factor IF-1 [Prevotella bivia JCVIHMP010]
          Length = 72

 Score = 40.1 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ +E G +I+      ISG  +  YI  LPG   KV++  +++ K   G     
Sbjct: 22  FRVELENGVEII----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70


>gi|282882041|ref|ZP_06290682.1| hypothetical protein HMPREF0628_0687 [Peptoniphilus lacrimalis
           315-B]
 gi|281298071|gb|EFA90526.1| hypothetical protein HMPREF0628_0687 [Peptoniphilus lacrimalis
           315-B]
          Length = 437

 Score = 40.1 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 14/108 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GG 152
           +K+   C   C +C   ++ G  +   +  +D    ++Y+ +      ++        G 
Sbjct: 147 VKISEGCNNNCSYCIIPKLRGKNRSRRI--EDIYEEVSYLAKNGAREIILIAQNTTDYGI 204

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           D  +     L K++K +  I  ++ +R    V  + P     ELI   
Sbjct: 205 D--LYGRYSLSKLIKEISKINDIKWIR----VLYLYPDHFTDELINEF 246


>gi|269956621|ref|YP_003326410.1| molybdenum cofactor biosynthesis protein A [Xylanimonas
           cellulosilytica DSM 15894]
 gi|269305302|gb|ACZ30852.1| molybdenum cofactor biosynthesis protein A [Xylanimonas
           cellulosilytica DSM 15894]
          Length = 380

 Score = 40.1 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 78/195 (40%), Gaps = 23/195 (11%)

Query: 86  LKGIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEK 141
           + G+V R+        + L   C + C +C   E +    K  V+S  +    +     +
Sbjct: 47  VPGLVDRFGRTATDLRVSLTDRCNLRCTYCMPAEGLPTLPKDAVMSRTEIARLVGVATRE 106

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
             + +V FTGG+PL+ +   L  +++ +  +     +   +               + L+
Sbjct: 107 LGVRQVRFTGGEPLLRAD--LVDIVRDVAALPQRPEISLTTNAVG------LDHRARALR 158

Query: 202 EAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI--------ILLSQSVLLKGINDD-- 250
           +AG   V I++    P  F+  A         AGI        ++   +VL++G+N D  
Sbjct: 159 DAGLDRVNISLDTLDPDTFARLARRPFLERTLAGISAAAEVFDVIKINAVLVRGLNLDHA 218

Query: 251 PEILANLMRTFVELR 265
            ++LA  +    ELR
Sbjct: 219 ADLLAWCLERGFELR 233


>gi|154249651|ref|YP_001410476.1| MiaB-like tRNA modifying enzyme [Fervidobacterium nodosum Rt17-B1]
 gi|154153587|gb|ABS60819.1| MiaB-like tRNA modifying enzyme [Fervidobacterium nodosum Rt17-B1]
          Length = 421

 Score = 40.1 bits (93), Expect = 0.52,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 27/156 (17%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E +I  E  +D I +               R  +K+   C   C +C  R + G++ 
Sbjct: 110 YWREDDISYEMVKDSIAE-------------RSRAFIKVEDGCNNGCTYCVIRSLRGTRI 156

Query: 123 GTVLSSKDTEAALAYI-QEKSQIWEVIFT----GGDPLILSHKRLQKVLKTLRYIKHVQI 177
            +       + A   I ++  ++          G D        L K+L  +  I     
Sbjct: 157 RSKPIEVVIKEAEQLITKKHKELVITGLNLGKYGKDIGT----NLAKLLNEVSKINGDFR 212

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           +R  S    ++P+ ++ ELI  + E  K +   +H 
Sbjct: 213 IRLSS----INPEDLDDELINIILENDK-ICNHLHI 243


>gi|310640976|ref|YP_003945734.1| radical sam domain-containing protein [Paenibacillus polymyxa SC2]
 gi|309245926|gb|ADO55493.1| Radical SAM domain-containing protein [Paenibacillus polymyxa SC2]
          Length = 377

 Score = 40.1 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 9/77 (11%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGD----PL 155
            +VC VYCRFC      GS +G VL     E     I+E  ++   E++  GG     P 
Sbjct: 62  TNVCDVYCRFCAFYRRPGSDEGYVLPD---EVIFQKIKETQEVGGTEILMQGGVNPNLPF 118

Query: 156 ILSHKRLQKVLKTLRYI 172
                 L+ + +    I
Sbjct: 119 SYYTDLLKAIKERFPDI 135


>gi|293402280|ref|ZP_06646418.1| pyruvate-formate lyase-activating enzyme [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291304387|gb|EFE45638.1| pyruvate-formate lyase-activating enzyme [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 379

 Score = 40.1 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 52/104 (50%), Gaps = 12/104 (11%)

Query: 76  DPIGDNNHSPLKGIVHR----YPDRILLKL-LHVCPVYCRFCFRREMVG-SQKGTVLSSK 129
           D + D     L G+       YP ++   +    C + C FC   ++V  ++  + + +K
Sbjct: 142 DAMEDEKEIKLFGLQKLTLLDYPQKMASTIFTGGCNMRCPFCQNADLVFLNENTSQIPTK 201

Query: 130 DTEAALAYIQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYI 172
           D    +A+++++  + E V  TGG+PL+  +  L+  L+T++ +
Sbjct: 202 DI---IAFLKKRRSVLEGVCITGGEPLL--NDTLESFLRTIKEL 240


>gi|256821541|ref|YP_003145504.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Kangiella koreensis DSM
           16069]
 gi|256795080|gb|ACV25736.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Kangiella koreensis DSM
           16069]
          Length = 446

 Score = 40.1 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%)

Query: 96  RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWE 146
              + ++  C  YC FC     R E V      VL+      +     +  + +    + 
Sbjct: 148 TAFVSVMEGCSKYCSFCVVPYTRGEEVSRPFDDVLAECAQLAEQGVREINLLGQNVNAYR 207

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR---INPELIQCLKEA 203
            I   GD        L +++  +  I  +  +R+ +  P+   +R   +  E+ + +   
Sbjct: 208 GITHEGD-----TADLAELITYVAAIDGIDRIRYTTSHPVEFSERLIQVYAEVPELVSHL 262

Query: 204 GKPV 207
             PV
Sbjct: 263 HLPV 266


>gi|163759697|ref|ZP_02166782.1| molybdenum cofactor biosynthesis protein A [Hoeflea phototrophica
           DFL-43]
 gi|162283294|gb|EDQ33580.1| molybdenum cofactor biosynthesis protein A [Hoeflea phototrophica
           DFL-43]
          Length = 345

 Score = 40.1 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 33/179 (18%), Positives = 69/179 (38%), Gaps = 39/179 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +       E   + ++  TGG+PL+  
Sbjct: 30  VSVTDRCDFRCTYCMAENMTFLPKKDLLTLEELDRLCTVFVE-KGVRKIRLTGGEPLV-- 86

Query: 159 HKRLQKVLKTLR------YIKHV-------QILRFHS-------RVPIVDPQRINPELIQ 198
            K + ++++ L        +  V       Q+ RF S       R   V    ++P+  +
Sbjct: 87  RKNIMQLIRGLSRHIDAGRMDEVTLTTNGSQLTRFASELYDCGVRRINVSIDTLDPDKFR 146

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILA 255
            +   G             E ++  +  ++    AG+ +   +V LKG ND   P+++ 
Sbjct: 147 QITRWG-------------ELAK-VLDGVAAAQAAGLKIKINAVALKGFNDTEIPDMMK 191


>gi|90416925|ref|ZP_01224854.1| hypothetical protein GB2207_06678 [marine gamma proteobacterium
           HTCC2207]
 gi|90331272|gb|EAS46516.1| hypothetical protein GB2207_06678 [marine gamma proteobacterium
           HTCC2207]
          Length = 296

 Score = 40.1 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 10/88 (11%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ----IWEVIFTG 151
           ++L++ + C    C FC     + + +    S K  E     ++  ++    +  V    
Sbjct: 20  LILQVTNGCSYNKCSFC----EMYTDQQKRFSPKPIEKIEEELRGLAEAGYPVKRVFLAD 75

Query: 152 GDPLILSHKRLQKVLKTLRY-IKHVQIL 178
           GD + LS +RL  +L+ +      VQ +
Sbjct: 76  GDAMTLSTRRLVDILQMINKYYPDVQRV 103


>gi|24375930|ref|NP_719973.1| molybdenum cofactor biosynthesis protein A [Shewanella oneidensis
           MR-1]
 gi|24350912|gb|AAN57417.1|AE015877_8 molybdenum cofactor biosynthesis protein A [Shewanella oneidensis
           MR-1]
          Length = 326

 Score = 40.1 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +  VC   C +C       + K   LS  + E  ++         ++  TGG+P +  
Sbjct: 17  MSVTDVCNFKCSYCLPDGYHPNGKQQFLSLSEIENLVSAF-SLVGTQKIRITGGEPTLRK 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
                 +++ +         R H+     +  R+     +      + + +++ +  P  
Sbjct: 76  D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 128

Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
             + +      E +  I    +AG   +   +VLLKG+ND
Sbjct: 129 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND 168


>gi|57234236|ref|YP_181685.1| MiaB family tRNA modification protein [Dehalococcoides ethenogenes
           195]
 gi|57224684|gb|AAW39741.1| tRNA modification enzyme, MiaB family [Dehalococcoides ethenogenes
           195]
          Length = 413

 Score = 40.1 bits (93), Expect = 0.53,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 19/113 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWE 146
             R  +K+   C  +C +C     RR     +   ++S  +   A  Y   +   ++I E
Sbjct: 126 RTRSFIKIQDGCDNFCSYCIVPFVRRHKSCRRVDEIISEINLRQAEGYQEIVLTGTEIGE 185

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
               G D        L  +++ +     +  LR  S    + P  I P L+  
Sbjct: 186 YASGGVD--------LAGLIEAILANTQIPRLRLSS----LQPGEITPRLLAL 226


>gi|313896785|ref|ZP_07830333.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral
           taxon 137 str. F0430]
 gi|312974702|gb|EFR40169.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral
           taxon 137 str. F0430]
          Length = 332

 Score = 40.1 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + CR+C     V       +LS ++    +  +     I +V  TGG+PL+ 
Sbjct: 14  ISVTDCCNLRCRYCMPAHGVKKLAHEDILSYEEILRDVRALAA-LGIRKVRLTGGEPLVR 72

Query: 158 SHKRLQKVLKTLRYIKHVQIL 178
               +  +++ L+ I  ++ +
Sbjct: 73  RD--IVTLVRGLKEIPGIETV 91


>gi|301064673|ref|ZP_07205062.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [delta proteobacterium
           NaphS2]
 gi|300441215|gb|EFK05591.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [delta proteobacterium
           NaphS2]
          Length = 439

 Score = 40.1 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 14/120 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + ++  C  +C +C    + G +     + +D      Y+     I E+   G +     
Sbjct: 151 ISIMEGCNNFCSYCIVPYVRGRE--FFRAPEDILEEAEYLIS-EGIREITLLGQNVNSYV 207

Query: 159 HKR------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            K+         +L  L  + H+  LRF +      P+  + EL+ C     K +   IH
Sbjct: 208 WKKNHNNWNFSSLLYELAELDHLLRLRFTTSH----PKDFSDELLACFAHIEK-LAGHIH 262


>gi|239820673|ref|YP_002947858.1| Radical SAM domain protein [Variovorax paradoxus S110]
 gi|239805526|gb|ACS22592.1| Radical SAM domain protein [Variovorax paradoxus S110]
          Length = 351

 Score = 40.1 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 45/218 (20%), Positives = 85/218 (38%), Gaps = 38/218 (17%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRL 162
            C V CRFC             + S +  A +A  + +  + +V+F G G+P       L
Sbjct: 105 GCAVGCRFCMTGR---DGLLRQVGSAEIIAQVALARMRRPVRKVVFMGMGEPA----HNL 157

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLKEAGKP--VYIAIHAN----- 214
             V++ +  +  V       +  +     + +P   + L++A     + +++H       
Sbjct: 158 DNVMEAIELLGTVGN--IGHKNLVFS--TVGDPRAFERLQQARVRPALALSLHTTKAGLR 213

Query: 215 ------HPYEFSE-EAIAAISRLANA-GIILLSQSVLLKGINDDPE----ILANLMRTFV 262
                  P   +  E + A  R A A G  +  Q  LL G+ND PE    I+  L   F 
Sbjct: 214 KKLLPRAPN-MTPEELVGAGERYARATGYPIQYQWTLLDGVNDGPEEIDGIVRLLSGKFG 272

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
            L + P    +     G +  R ++E  +++  +L ++
Sbjct: 273 VLNMIP---FNA--VEGVAFSRPSLERCEQMARTLHQR 305


>gi|18978436|ref|NP_579793.1| arylsulfatase regulatory protein, putative [Pyrococcus furiosus DSM
           3638]
 gi|18894280|gb|AAL82188.1| arylsulfatase regulatory protein, putative [Pyrococcus furiosus DSM
           3638]
          Length = 472

 Score = 40.1 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 9/126 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----VIFTGGD 153
           L + + C + C +C+  ++    KG +L+ +  E  L +    +Q  +     V F GG+
Sbjct: 93  LVMTYSCNLRCPYCYEGDI--KSKGGLLTREKIETILTFASAHAQGDKKPTISVSFYGGE 150

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL L+ K  +  L+ L  +K  + +R +S   + +   IN +++  +        + I  
Sbjct: 151 PL-LNWKGCEYTLQRLEEMKENKEIRDYSAGFVTNGTLINEDIVDAINNYNV-YSMQITL 208

Query: 214 NHPYEF 219
           + P E 
Sbjct: 209 DGPKEI 214


>gi|117926243|ref|YP_866860.1| radical SAM protein [Magnetococcus sp. MC-1]
 gi|117609999|gb|ABK45454.1| Radical SAM domain protein [Magnetococcus sp. MC-1]
          Length = 293

 Score = 40.1 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 6/85 (7%)

Query: 97  ILLKLLHVCPV-YCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           ++L+    C V +C FC   R      K      K+ E A            V    GD 
Sbjct: 18  LILQATIGCSVNHCTFCSMYRHKRFHIKPLPQLFKEIEHAA---SAWPTARRVFLADGDA 74

Query: 155 LILSHKRLQKVLKTLRY-IKHVQIL 178
           L+L    L+++L  LR  +  +Q +
Sbjct: 75  LVLPTDHLERILDHLRRHLPQLQRV 99


>gi|312879890|ref|ZP_07739690.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
 gi|310783181|gb|EFQ23579.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
          Length = 373

 Score = 40.1 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 51/150 (34%), Gaps = 26/150 (17%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           ++  L   C + CR C+       +    +S ++    L           V+ +GG+PL 
Sbjct: 30  VVWHLTDRCGLRCRHCY--AEATPEGERFVSLREGFRCLETFAAWGAP-AVLLSGGEPLE 86

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANH 215
             H R    L+                + +  +  R++    + L + G   Y+ +  + 
Sbjct: 87  SPHGR--AFLERGAE--------LGLSLAVSTNGTRVDDSWAEALAKRG--AYVGVSLDG 134

Query: 216 PYEFSE----------EAIAAISRLANAGI 235
           P E  +           A A + RL  AG 
Sbjct: 135 PQEIHDSFRGVPGAWNAAAAGLERLKRAGA 164


>gi|319646743|ref|ZP_08000972.1| HemZ protein [Bacillus sp. BT1B_CT2]
 gi|317391331|gb|EFV72129.1| HemZ protein [Bacillus sp. BT1B_CT2]
          Length = 528

 Score = 40.1 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 15/159 (9%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EA 133
           D     +  +     +  +   +  CP  C +C         +   + S         + 
Sbjct: 181 DRQLKAVPDLYELGQEVSIYIGIPFCPTKCAYCTFPAYAIRGQAGRVGSFLWGLHYEMQK 240

Query: 134 ALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQR 191
              +++E    I  V F GG P  ++ + +  + + + R    V+ +R  + V    P  
Sbjct: 241 IGEWLKENDVSITTVYFGGGTPTSITAEEMDLLYEEMHRSFPDVKNIREVT-VEAGRPDT 299

Query: 192 INPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
           I  E +  LK+     + I      P  +  E + AI R
Sbjct: 300 ITEEKLAVLKKWNIDRISIN-----PQSYENETLKAIGR 333


>gi|92114198|ref|YP_574126.1| GTP cyclohydrolase subunit MoaA [Chromohalobacter salexigens DSM
           3043]
 gi|91797288|gb|ABE59427.1| GTP cyclohydrolase subunit MoaA [Chromohalobacter salexigens DSM
           3043]
          Length = 329

 Score = 40.1 bits (93), Expect = 0.54,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 38/177 (21%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           RY   + + +   C   C +C   +M    +  VL+ ++ E       E   + ++  TG
Sbjct: 13  RY---VRISVTDRCDFRCVYCMSEDMTFLPRAQVLTLEEIEQVARAFVE-LGVEKIRLTG 68

Query: 152 GDPLILSHKRLQKVLKTLRYIK----------------HVQILRF-HSRVPIVDPQRINP 194
           G+PL+   + +  ++  +  +                 H + LR    +   +    ++P
Sbjct: 69  GEPLV--RRGIDDLVGRIGALPGLKDFAMTTNGAGLVKHAKALREGGLQRLNISIDSLDP 126

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
           E  + L   G                E  +A I    +AG   +   +V+LKG NDD
Sbjct: 127 ERFRQLTRTGN--------------LEHVVAGIRAARDAGFERIKLNAVMLKGRNDD 169


>gi|300694498|ref|YP_003750471.1| radical_sam domain [Ralstonia solanacearum PSI07]
 gi|299076535|emb|CBJ35860.1| conserved hypothethical protein, radical_SAM domain [Ralstonia
           solanacearum PSI07]
          Length = 398

 Score = 40.1 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 8/85 (9%)

Query: 95  DRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIWE 146
           ++ +LK++  C + C +C+   R +     +  V+S +  +     I E       Q + 
Sbjct: 20  NQAILKVVQRCNLDCTYCYVYNRGDDSWKTRLPVISDRVIDKLAERINEHCARFALQSFT 79

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY 171
           +   GG+PL+L  +R+++++  LR 
Sbjct: 80  IEIHGGEPLLLGKRRMREMVDRLRS 104


>gi|169335621|ref|ZP_02862814.1| hypothetical protein ANASTE_02041 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258359|gb|EDS72325.1| hypothetical protein ANASTE_02041 [Anaerofustis stercorihominis DSM
           17244]
          Length = 448

 Score = 40.1 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 16/118 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154
             LK+   C  +C +C     V         S+  E  ++  +      + E+I    D 
Sbjct: 153 AYLKVSEGCDKHCTYC-----VIPSIRGKQRSRKIEDIVSEAKRLADRGVKELILIAQDV 207

Query: 155 L-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                 +   ++L ++L+ L  I+ +  +R    V  + P+ ++ ELI       K +
Sbjct: 208 GEYGTDLYGERKLPELLEELNKIESIHWIR----VLYIYPETVSDELIDKFVNLDKVL 261


>gi|218782945|ref|YP_002434263.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218764329|gb|ACL06795.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 334

 Score = 40.1 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 45/104 (43%), Gaps = 13/104 (12%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +  R+P  I + + H C + C +C   ++   +    + +     A+    +   +  + 
Sbjct: 18  LGRRFPASIGMIVTHRCNLRCAYCGFPDLPSDE----MDADQWLEAIHAFLQAGTLR-MG 72

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ-ILRFHSRVPIVDPQR 191
           F+GG+PL      L++ L  L    H + ++  ++   +  P+R
Sbjct: 73  FSGGEPL------LRQDLGRLLQAAHGKALITLNTNGLL-LPER 109


>gi|153853169|ref|ZP_01994578.1| hypothetical protein DORLON_00563 [Dorea longicatena DSM 13814]
 gi|149753955|gb|EDM63886.1| hypothetical protein DORLON_00563 [Dorea longicatena DSM 13814]
          Length = 481

 Score = 40.1 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 19/117 (16%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLILSHKR 161
            C  +C +C     +         S+D EA ++ I++     + EV+  G + +    K 
Sbjct: 198 GCNNFCSYC-----IVPYVRGRERSRDPEAIISEIRQLVADGVVEVMLLGQN-VNSYGKN 251

Query: 162 LQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           L+       +L+ +  I+ ++ +RF +      P+ ++ ELI+ + ++ K +   +H
Sbjct: 252 LEHPITFAQLLERIEQIEGLERIRFMTSH----PKDLSDELIEVMGKS-KKICKHLH 303


>gi|325299811|ref|YP_004259728.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides salanitronis DSM 18170]
 gi|324319364|gb|ADY37255.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides salanitronis DSM 18170]
          Length = 158

 Score = 40.1 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 25/59 (42%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            C   C+ C   E      G+ L+ K  +  ++ I+    +  + F+GGDP   S   L
Sbjct: 26  GCSHRCKGCHNPESWNPLAGSPLTDKVIDGMISQIKANPLLDGITFSGGDPFYHSEAFL 84


>gi|228470224|ref|ZP_04055131.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Porphyromonas uenonis 60-3]
 gi|228308175|gb|EEK17038.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Porphyromonas uenonis 60-3]
          Length = 156

 Score = 40.1 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 4/71 (5%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C  +C  C   E      GT L+ +  +  +  I +   +  +  +GGDP+        
Sbjct: 25  GCSHHCPGCHNPESHSPLVGTPLTEEYLQQIIDEINDNPLLDGITLSGGDPMFSP----G 80

Query: 164 KVLKTLRYIKH 174
           ++L  L+ +KH
Sbjct: 81  ELLTLLKRLKH 91


>gi|226939284|ref|YP_002794355.1| coproporphyrinogen III oxidase [Laribacter hongkongensis HLHK9]
 gi|226714208|gb|ACO73346.1| HemN [Laribacter hongkongensis HLHK9]
          Length = 470

 Score = 40.1 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 11/133 (8%)

Query: 105 CPVYCRFCFRREMVGSQK---GTVLSSKDTEAAL--AYIQEKSQIWEVIFTGGDPLILSH 159
           C   C +C   +++   K    T L   + E AL   Y+Q   Q+ ++ F GG P  LS 
Sbjct: 74  CNTVCYYCACNKIITKDKSRADTYLDYLERELALHAEYLQGHPQLAQLHFGGGTPTFLSD 133

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219
            ++ ++++ +    H Q++        +DP+++  + ++ L   G             +F
Sbjct: 134 AQMTRLMQAIGR--HFQLVPHGEYSIEIDPRKVTADNVKHLASLGFNRMSVG----VQDF 187

Query: 220 SEEAIAAISRLAN 232
             +  AA++R+ +
Sbjct: 188 DPQVQAAVNRIQS 200


>gi|52784833|ref|YP_090662.1| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
 gi|163119326|ref|YP_078263.2| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
 gi|52347335|gb|AAU39969.1| HemZ [Bacillus licheniformis ATCC 14580]
 gi|145902832|gb|AAU22625.2| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580]
          Length = 502

 Score = 40.1 bits (93), Expect = 0.55,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 15/159 (9%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EA 133
           D     +  +     +  +   +  CP  C +C         +   + S         + 
Sbjct: 155 DRQLKAVPDLYELGQEVSIYIGIPFCPTKCAYCTFPAYAIRGQAGRVGSFLWGLHYEMQK 214

Query: 134 ALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQR 191
              +++E    I  V F GG P  ++ + +  + + + R    V+ +R  + V    P  
Sbjct: 215 IGEWLKENDVSITTVYFGGGTPTSITAEEMDLLYEEMHRSFPDVKNIREVT-VEAGRPDT 273

Query: 192 INPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
           I  E +  LK+     + I      P  +  E + AI R
Sbjct: 274 ITEEKLAVLKKWNIDRISIN-----PQSYENETLKAIGR 307


>gi|310658888|ref|YP_003936609.1| radical sam-superfamily protein [Clostridium sticklandii DSM 519]
 gi|308825666|emb|CBH21704.1| Radical SAM-superfamily protein [Clostridium sticklandii]
          Length = 352

 Score = 40.1 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 14/118 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +      CP  C FC ++ + G            D E +L  I+  + I    F G    
Sbjct: 8   IFIPHQGCPNDCVFCNQKRITGKGASIDFEEIKSDIEDSLKTIKPDTLIEIAFFGGS--F 65

Query: 156 ILSHKRLQKVLKTLR----YIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
              +  LQ+    +      +   +  +R  +R     P  I+ E ++ LK     + 
Sbjct: 66  TAINTELQRRCLEIANYYKSMDARICDIRISTR-----PDAISKEKLEFLKMYNVSII 118


>gi|290968070|ref|ZP_06559619.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
 gi|290781976|gb|EFD94555.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L]
          Length = 295

 Score = 40.1 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 8/116 (6%)

Query: 98  LLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAY-IQEKSQIWEVIFTGGDPL 155
           +L++   C    C FC    M       + S  + +  +    +    +  +    GD L
Sbjct: 21  ILRVTIGCSHNRCTFCS---MYKDSSYRIRSLAEIDGIIERGARAMPYVRRIFLADGDAL 77

Query: 156 ILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           +L    L  +LK        +   R  +     D  R  PE +Q LK+AG  +   
Sbjct: 78  VLPTASLLHILKKCYDTFPQIT--RIGAYATPNDINRKTPEELQALKDAGLDILYM 131


>gi|291280509|ref|YP_003497344.1| molybdenum cofactor biosynthesis protein A [Deferribacter
           desulfuricans SSM1]
 gi|290755211|dbj|BAI81588.1| molybdenum cofactor biosynthesis protein A [Deferribacter
           desulfuricans SSM1]
          Length = 329

 Score = 40.1 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 17/111 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C   C++C  +          +LS +D    +  + E   I ++  TGG+PL+ 
Sbjct: 18  ISVTDRCNFRCKYCMPQHNFKMLSHSDILSYEDIIFVVKTLTE-VGIEKIRITGGEPLV- 75

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
             K +  + + L  +K+++ L   +                 LK+ GK ++
Sbjct: 76  -RKNINYLFERLGGLKNIKDLTLTTNG-------------SLLKKYGKTIF 112


>gi|270296162|ref|ZP_06202362.1| cfr family radical SAM enzyme [Bacteroides sp. D20]
 gi|317480739|ref|ZP_07939825.1| cfr family radical SAM enzyme [Bacteroides sp. 4_1_36]
 gi|270273566|gb|EFA19428.1| cfr family radical SAM enzyme [Bacteroides sp. D20]
 gi|316903080|gb|EFV24948.1| cfr family radical SAM enzyme [Bacteroides sp. 4_1_36]
          Length = 346

 Score = 40.1 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 46/200 (23%)

Query: 95  DRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG 151
           DR  L +     C + C+FC    M G Q  T  L+S      ++ + E+ ++  V+  G
Sbjct: 100 DRATLCVSSQVGCKMNCKFC----MTGKQGFTANLTSNQIINQISSLPERDKLTNVVMMG 155

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEA 203
            G+PL      L +VLK L  +         S      P+R+          L + + E+
Sbjct: 156 MGEPL----DNLDEVLKALEIMT-------ASYGYAWSPKRVTLSSVGLKKGLQRFIGES 204

Query: 204 GKPVYIAIHANHP---YEFSEEAIA-AISRLANAGIILLS-----Q-------SVLLKGI 247
              + I++H+  P    E      A +I+ +     +L +     Q        V  KG+
Sbjct: 205 DCHLAISLHSPIPLQRRELMPAEKAFSITEIVE---LLRNYDFSKQRRLSFEYIVF-KGV 260

Query: 248 NDDPEILANLMRTFVELRIK 267
           ND       L++    L  +
Sbjct: 261 NDSLPYAKELLKLLRGLDCR 280


>gi|160892219|ref|ZP_02073222.1| hypothetical protein BACUNI_04683 [Bacteroides uniformis ATCC 8492]
 gi|156858697|gb|EDO52128.1| hypothetical protein BACUNI_04683 [Bacteroides uniformis ATCC 8492]
          Length = 350

 Score = 40.1 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 46/200 (23%)

Query: 95  DRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG 151
           DR  L +     C + C+FC    M G Q  T  L+S      ++ + E+ ++  V+  G
Sbjct: 104 DRATLCVSSQVGCKMNCKFC----MTGKQGFTANLTSNQIINQISSLPERDKLTNVVMMG 159

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEA 203
            G+PL      L +VLK L  +         S      P+R+          L + + E+
Sbjct: 160 MGEPL----DNLDEVLKALEIMT-------ASYGYAWSPKRVTLSSVGLKKGLQRFIGES 208

Query: 204 GKPVYIAIHANHP---YEFSEEAIA-AISRLANAGIILLS-----Q-------SVLLKGI 247
              + I++H+  P    E      A +I+ +     +L +     Q        V  KG+
Sbjct: 209 DCHLAISLHSPIPLQRRELMPAEKAFSITEIVE---LLRNYDFSKQRRLSFEYIVF-KGV 264

Query: 248 NDDPEILANLMRTFVELRIK 267
           ND       L++    L  +
Sbjct: 265 NDSLPYAKELLKLLRGLDCR 284


>gi|312897930|ref|ZP_07757343.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Megasphaera micronuciformis F0359]
 gi|310620964|gb|EFQ04511.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Megasphaera micronuciformis F0359]
          Length = 167

 Score = 40.1 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 11/77 (14%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C  +C  CF  E    + GT+ + K+T+  ++Y++E   I  +   GG+P+  +    
Sbjct: 24  TGCTHHCYNCFNEEYQNPEFGTLWTDKETDQVISYLKE-PTISGLTLLGGEPMQNTDGL- 81

Query: 163 QKVLKTLRYIKHVQILR 179
                    I  ++ +R
Sbjct: 82  ---------IPVIRRVR 89


>gi|303234163|ref|ZP_07320809.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Finegoldia magna BVS033A4]
 gi|302494704|gb|EFL54464.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Finegoldia magna BVS033A4]
          Length = 166

 Score = 40.1 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R    +   C + C+ CF +E      G   +   T   + Y+  + +I  +   GG+P 
Sbjct: 18  RCTFFVTG-CSLNCKNCFNKEYQDPNFGEKWTDTQTNQIIDYL-NQEEIDGLTILGGEPF 75

Query: 156 ILSHKRLQKVLKTLRY 171
                 L ++++ +R 
Sbjct: 76  ESCDD-LIEIVEKIRE 90


>gi|253568256|ref|ZP_04845667.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251842329|gb|EES70409.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 306

 Score = 40.1 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 71/227 (31%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  +    S ++    + Y+  +          E+ + 
Sbjct: 8   AYLKISEGCDRKCSYCAIPIITG--RHISKSMEEILDEVRYLVSQGVKEFQVIAQELTYY 65

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G D  +   + L ++++ +  I  V+ +R H       P     +L + ++E        
Sbjct: 66  GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 114

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
                           +                L+ I+D+   +  LMR           
Sbjct: 115 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 137

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
                         ++ E+  K++   ++++ G+  +   ++  PG 
Sbjct: 138 --------------VSKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGE 170


>gi|229105357|ref|ZP_04236004.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock3-28]
 gi|228678069|gb|EEL32299.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock3-28]
          Length = 339

 Score = 40.1 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LK+AG         
Sbjct: 79  PLLRKD--LTKLIARLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKKAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ +G+ND 
Sbjct: 131 AIDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKQGMNDH 177


>gi|237653116|ref|YP_002889430.1| molybdenum cofactor biosynthesis protein A [Thauera sp. MZ1T]
 gi|237624363|gb|ACR01053.1| molybdenum cofactor biosynthesis protein A [Thauera sp. MZ1T]
          Length = 359

 Score = 40.1 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 47/113 (41%), Gaps = 15/113 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  RE+ G       +  +LS ++          +  + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPREVFGDDYAFLPRRQLLSFEEILRVARLFVAR-GVRKIRITGGE 99

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           PL+     + +++  L  +  V+ +   +         + P+L + LK+AG  
Sbjct: 100 PLLRKD--VDRLIGMLAALDGVE-VTLTTNGV------LLPKLARRLKDAGLH 143


>gi|154499609|ref|ZP_02037647.1| hypothetical protein BACCAP_03265 [Bacteroides capillosus ATCC
           29799]
 gi|150271687|gb|EDM98931.1| hypothetical protein BACCAP_03265 [Bacteroides capillosus ATCC
           29799]
          Length = 205

 Score = 40.1 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 42/105 (40%), Gaps = 15/105 (14%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--------EAALAYIQE 140
           I + Y   + + L + C   C FC R       KG++ +            EA   +++ 
Sbjct: 4   ITYEYEGGLYVNLTNRCDCACVFCLRH---NGHKGSIYADDLWLDHEPTREEALDDFLRR 60

Query: 141 K-SQIWEVIFTG-GDPLILSHKRLQKVLKTL-RYIKHVQILRFHS 182
             +   E++F G G+P+      +  ++  L     ++  +R ++
Sbjct: 61  DLTSYREIVFCGFGEPMY-RWDDIAWLIDALKARCPNLPPVRINT 104


>gi|153808740|ref|ZP_01961408.1| hypothetical protein BACCAC_03039 [Bacteroides caccae ATCC 43185]
 gi|149128566|gb|EDM19784.1| hypothetical protein BACCAC_03039 [Bacteroides caccae ATCC 43185]
          Length = 439

 Score = 40.1 bits (93), Expect = 0.56,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 53/137 (38%), Gaps = 8/137 (5%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C      G  +   ++S   +A  A  +   +I       GD
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASMVEQAGQAAAEGGKEIVLTGVNIGD 207

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
               + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +        H 
Sbjct: 208 FGKTTGETFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSRSR---SFMPHF 260

Query: 214 NHP-YEFSEEAIAAISR 229
           + P    S+E +  + R
Sbjct: 261 HIPLQSGSDEVLKLMRR 277


>gi|319901401|ref|YP_004161129.1| 23S rRNA m(2)A-2503 methyltransferase [Bacteroides helcogenes P
           36-108]
 gi|319416432|gb|ADV43543.1| 23S rRNA m(2)A-2503 methyltransferase [Bacteroides helcogenes P
           36-108]
          Length = 346

 Score = 40.1 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 50/203 (24%)

Query: 94  PDRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFT 150
            DR  L +     C + C+FC    M G Q  T  L++      ++ + E+ ++  V+  
Sbjct: 99  DDRATLCVSSQVGCKMNCKFC----MTGKQGFTANLTANQIINQISSLPERDKLTNVVMM 154

Query: 151 G-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKE 202
           G G+PL      L +VLK L  +         S      P+RI          L + ++E
Sbjct: 155 GMGEPL----DNLDEVLKALEVMT-------ASYGYSWSPKRITLSSVGLRKGLQRFIEE 203

Query: 203 AGKPVYIAIHANHP---YEFSEEAIA-AISRLANAGIILLS-----Q-------SVLLKG 246
           +   + I++H   P    E      A +I+ +     +L +     Q        V  KG
Sbjct: 204 SDCHLAISLHTPVPLQRRELMPAEKAFSITEIVE---LLRNYDFSKQRRLSFEYIVF-KG 259

Query: 247 INDD---PEILANLMRTFVELRI 266
           +ND     + L  L+R   + RI
Sbjct: 260 VNDSLLYAKELLKLLRGL-DCRI 281


>gi|306816147|ref|ZP_07450285.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
 gi|305850543|gb|EFM51000.1| coproporphyrinogen III oxidase [Escherichia coli NC101]
          Length = 445

 Score = 40.1 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLTRIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|300710670|ref|YP_003736484.1| MiaB-like tRNA modifying enzyme [Halalkalicoccus jeotgali B3]
 gi|299124353|gb|ADJ14692.1| MiaB-like tRNA modifying enzyme [Halalkalicoccus jeotgali B3]
          Length = 414

 Score = 40.1 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 8/112 (7%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           +L +   C   C +C  +   G      +   + E A A +   +   E+  TG D  + 
Sbjct: 124 ILPIARGCMSNCSYCITKHATGRVDSPTI-EANVEKARALV--HAGAKELRITGQDTGVY 180

Query: 158 SHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                   L ++L  +  I+    +R     P      I+ EL +   E  K
Sbjct: 181 GWDDGERSLPELLSRICAIEGEFRVRLGMANPGGI-HGIHEELAEVFAENEK 231


>gi|304317725|ref|YP_003852870.1| radical SAM protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302779227|gb|ADL69786.1| Radical SAM domain protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 416

 Score = 40.1 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +++  + + C + C +C        +K  +LS+ D + A+  I +     EV+ +GG+PL
Sbjct: 95  KVVFSITNRCNLSCEYCCVDADNYLKKDDILSTSDIKRAIDKILKLK-PQEVVISGGEPL 153

Query: 156 I 156
           +
Sbjct: 154 V 154


>gi|255020721|ref|ZP_05292781.1| tRNA-i(6)A37 methylthiotransferase [Acidithiobacillus caldus ATCC
           51756]
 gi|254969837|gb|EET27339.1| tRNA-i(6)A37 methylthiotransferase [Acidithiobacillus caldus ATCC
           51756]
          Length = 437

 Score = 40.1 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 38/126 (30%), Gaps = 21/126 (16%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGD 153
              + +   C  +C FC      G +    +    ++    +        + EV   G +
Sbjct: 136 TAFVTVQEGCDKFCTFCVVPHTRGREFSRPMPDILREVRQLVD-----QGVREVTLLGQN 190

Query: 154 P-------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                    ++    L ++L+ L  I  +  LR+ +  P     R        +      
Sbjct: 191 VNAYRGATGLIGEGDLAELLERLARIPDLLRLRYTTSHPNNLDDR-------LIAAHRDI 243

Query: 207 VYIAIH 212
             +A H
Sbjct: 244 PILAAH 249


>gi|212694739|ref|ZP_03302867.1| hypothetical protein BACDOR_04271 [Bacteroides dorei DSM 17855]
 gi|237710987|ref|ZP_04541468.1| radical SAM domain-containing protein [Bacteroides sp. 9_1_42FAA]
 gi|212662718|gb|EEB23292.1| hypothetical protein BACDOR_04271 [Bacteroides dorei DSM 17855]
 gi|229454831|gb|EEO60552.1| radical SAM domain-containing protein [Bacteroides sp. 9_1_42FAA]
          Length = 368

 Score = 40.1 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 22/160 (13%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
             R P     +L   C + C  CF R    V  + G +   +        +Q+   ++ +
Sbjct: 20  QSRVPITTNFELTPTCTLNCDMCFIRTERSVVERHGGLSPLQQWLDWAEQLQDMGTLF-I 78

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           + TGG+P++      +++   LR +  +  L         +   I+ E+++ L+      
Sbjct: 79  LLTGGEPMLYP--HFKELYTRLREMGFILTL-------NTNGTLIDNEMVRILQTHKPRR 129

Query: 208 YIAIHANHPYEFSEEAI----------AAISRLANAGIIL 237
                     E                 A+ RL  A I +
Sbjct: 130 INVTLYGDSRETYGRLCHNPQGYTLCMEALKRLKKADIDV 169


>gi|126653928|ref|ZP_01725772.1| hypothetical protein BB14905_00445 [Bacillus sp. B14905]
 gi|126589588|gb|EAZ83728.1| hypothetical protein BB14905_00445 [Bacillus sp. B14905]
          Length = 370

 Score = 40.1 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
               ++C + C  C     + ++    L     +  L  + E   +  +  TGG+P ++S
Sbjct: 33  FTTTNLCNMRCAHCAVGYTLQNKDPEALP---IDLILRRLDEIPHLKTLSITGGEP-MMS 88

Query: 159 HKRLQKVLKTLRYIKHVQILR 179
            K +Q  +  L    H + +R
Sbjct: 89  KKSVQNYVLPLLKYAHERGVR 109


>gi|256827640|ref|YP_003151599.1| putative Fe-S oxidoreductase [Cryptobacterium curtum DSM 15641]
 gi|256583783|gb|ACU94917.1| predicted Fe-S oxidoreductase [Cryptobacterium curtum DSM 15641]
          Length = 561

 Score = 40.1 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 29/182 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTG 151
           P  +  ++   C + C  C      GS  G +      E   A I + + I    +I TG
Sbjct: 140 PRIVAWEITRSCNLSCAHCRAAAEFGSYAGEL----SLEQCKAVIDDIATITNPILIITG 195

Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
           G+P +       +    +    +  V      +   IV       E+   + E G + + 
Sbjct: 196 GEPFMRPDIWDIIDYARER-GCMPVV-----GTNGTIV-----TEEIAHKMAEHGIRRMS 244

Query: 209 IAIHANHPYEFSE---------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           +++      E            EAI  I     AG+ +     + K   +  E + +L +
Sbjct: 245 VSLDFPTAAEHDGFRGQQGSFNEAIRGIRLAQQAGVGVQINMTVTKKNAERMEEMHDLSQ 304

Query: 260 TF 261
             
Sbjct: 305 QL 306


>gi|114567375|ref|YP_754529.1| molybdenum cofactor biosynthesis protein A [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|122317679|sp|Q0AVU6|MOAA_SYNWW RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|114338310|gb|ABI69158.1| GTP cyclohydrolase subunit MoaA [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 326

 Score = 40.1 bits (93), Expect = 0.57,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 34/170 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA--LAYIQEKSQIWEVIFTGGDPLI 156
           + L   C + CR+C      G    T  S    E    L  I  +  I ++  TGG+PL+
Sbjct: 14  ISLTDRCNLRCRYC--MPETGVDNLTHYSILSLEEMARLVRIASELGIQKIRLTGGEPLV 71

Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHAN 214
             +  +L   +  +  I  + +    +         +   L + LK AG   +  ++   
Sbjct: 72  RRNVPQLISYIAQIPRIDDIALTTNGT---------LFAALAEELKTAGLNRINFSL--- 119

Query: 215 HPYEFSEE-------------AIAAISRLANAGI-ILLSQSVLLKGINDD 250
                  E                AI +     +  +    V+++G NDD
Sbjct: 120 --DSLVPEKFKYITRRGDLSKVKEAIFKALELDMHPVKINMVVIRGFNDD 167


>gi|303326380|ref|ZP_07356823.1| radical SAM domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302864296|gb|EFL87227.1| radical SAM domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 391

 Score = 40.1 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 19/112 (16%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
           +  ++   C + C+ C          G + +    + A A I    Q+    +IFTGGDP
Sbjct: 48  VAWEVTRSCNLACKHCRAEAHPEPYPGELST----DEAKALIDTFPQVGNPIIIFTGGDP 103

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG 204
           ++         +  L    H + L          P    I PE  + +KEAG
Sbjct: 104 MMRPD------VYELVAYTHAKGLTC-----AFSPNGTLITPESARRIKEAG 144


>gi|257462828|ref|ZP_05627234.1| Fe-S oxidoreductase [Fusobacterium sp. D12]
 gi|317060457|ref|ZP_07924942.1| Fe-S oxidoreductase [Fusobacterium sp. D12]
 gi|313686133|gb|EFS22968.1| Fe-S oxidoreductase [Fusobacterium sp. D12]
          Length = 436

 Score = 40.1 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 48/140 (34%), Gaps = 15/140 (10%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152
            R  +K+   C  +C +C      G  +        ++ +  L  ++   +I  +    G
Sbjct: 145 TRAYVKIQDGCNEFCSYCKIPFARGRSRSRRPEKVLEEIDKLL--VEGFREIILIGINLG 202

Query: 153 DPLI-LSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI- 209
           D    L  +   + +++ +     +Q +R  S    V P RI    +        P  + 
Sbjct: 203 DYGKDLKEEINFEDLVRNILKKDLLQRVRIGS----VYPDRITESFMTLF---DHPKMMP 255

Query: 210 AIHANHPYEFSEEAIAAISR 229
            +H +      +  +  + R
Sbjct: 256 HLHIS-LQSCDDTVLRNMRR 274


>gi|322418737|ref|YP_004197960.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M18]
 gi|320125124|gb|ADW12684.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M18]
          Length = 326

 Score = 40.1 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 30/167 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C   + V   +   +LS ++     +    +  I ++  TGG+PL+ 
Sbjct: 16  LSVTDRCNMRCCYCMPAQGVAKLEHKEMLSYEELFKVASACVAQ-GIEKIRVTGGEPLV- 73

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
             + L   L  L  +  ++ L   +            EL   L+EAG   + I++     
Sbjct: 74  -RRGLVDFLARLSRVPGLKELVLTTNGLQ------LEELALPLREAGVARLNISL----- 121

Query: 217 YEFSEEAIAAISRLAN-----AGI---------ILLSQSVLLKGIND 249
                E  A I+R A+     AGI          L    V+++G+ND
Sbjct: 122 DSLQPETFARITRGADLNKVLAGIDAAQKAGFGPLKINMVVMRGVND 168


>gi|160947755|ref|ZP_02094922.1| hypothetical protein PEPMIC_01690 [Parvimonas micra ATCC 33270]
 gi|158446889|gb|EDP23884.1| hypothetical protein PEPMIC_01690 [Parvimonas micra ATCC 33270]
          Length = 443

 Score = 40.1 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 12/96 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  +K+   C ++C +C      G  K   +     E A+      +   EVI TG  
Sbjct: 149 KTRAYIKIQEGCNMFCTYCIIPYARGPIKSRPI-DDIYEEAVK--LANNGYKEVIITGIH 205

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
                 D  + +  RL  V++ L  I+++  +R  S
Sbjct: 206 VGSYGLD--LGNDTRLIDVIEKLSTIENLDRIRLSS 239


>gi|325275801|ref|ZP_08141670.1| molybdenum cofactor synthesis domain-containing protein
           [Pseudomonas sp. TJI-51]
 gi|324099072|gb|EGB97049.1| molybdenum cofactor synthesis domain-containing protein
           [Pseudomonas sp. TJI-51]
          Length = 322

 Score = 40.1 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 20/160 (12%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C +C    + +V +Q    LS+      +AY+ E + I  +  TGG+PL+
Sbjct: 15  VSLTAACNYACTYCVPDGKRLVAAQDE--LSADALARGVAYLIEAAGIERLRITGGEPLV 72

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
               RL   L  +  +  ++ +         + Q +  +L Q      + + +++    P
Sbjct: 73  SP--RLDAFLAAVAKLG-LEDI-----SLTTNGQMLGRKLPQLQAAGIRRLNVSLDTLDP 124

Query: 217 YEFSEEAI--------AAISRLANAGIILLSQSVLLKGIN 248
             F + A         AA+ R    G+ +    V ++G N
Sbjct: 125 LAFRQIARGGDLATVLAAMERARAMGMQIKVNMVPMRGQN 164


>gi|293402175|ref|ZP_06646313.1| 2-methylthioadenine synthetase [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291304282|gb|EFE45533.1| 2-methylthioadenine synthetase [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 433

 Score = 40.1 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 30/171 (17%)

Query: 66  ELNILPEEREDP-IGDNNHSPLKG-----------IVHRYPDRILLKLLHVCPVYCRFCF 113
           E++ +   RE P + +  HS L G           +V   P    LK+   C   C +C 
Sbjct: 94  EIDAVISIREYPHLHEILHSLLDGKELVSYGKSERMVSSKPWTAYLKIAEGCSNRCTYCA 153

Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP------LILSHKRLQKVLK 167
              ++     T    +  + A      +  + E++    D       L      L+ +L+
Sbjct: 154 I-PLIRGDNVTFPMEQLVQEAKE--LAQRGVKELVLIAQDTTKYGVDLYGKRSLLE-LLQ 209

Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----YIAIHAN 214
            L  I     +R       + P  I+ +LI+ + +  K +        HAN
Sbjct: 210 KLHEIDGFHWIRI----LYMYPDEIDEDLIEGMAKLPKVLPYFDIPMQHAN 256


>gi|189219894|ref|YP_001940535.1| Molybdenum cofactor biosynthesis enzyme [Methylacidiphilum
           infernorum V4]
 gi|189186752|gb|ACD83937.1| Molybdenum cofactor biosynthesis enzyme [Methylacidiphilum
           infernorum V4]
          Length = 337

 Score = 40.1 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 14/158 (8%)

Query: 99  LKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C   C +CF +++   S+K + LS ++  A + +   K    +   TGG+PL+ 
Sbjct: 26  ISVTDRCNERCIYCFPQDLGFLSKKDSQLSFEELYAVVFHGAMKHGFRDFRITGGEPLV- 84

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSR-VPIVDPQRINPELIQCLKEAGKPVYIAI-HANH 215
               L   ++ L     +  +R  +    +    R   EL +  + AG  V +     + 
Sbjct: 85  RKGTLA-FIRRLTRTPGISSVRLSTNGTLLGYYAR---ELKEA-QIAGINVSLDTLKPSL 139

Query: 216 PYEFSE----EAIAAISRLANAGI-ILLSQSVLLKGIN 248
             + +       +  I      GI  +   +VLLKGIN
Sbjct: 140 YKKITGGDIVPVLEGIEECRKVGIEPIKLNTVLLKGIN 177


>gi|20807824|ref|NP_622995.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
           MB4]
 gi|81481565|sp|Q8RA52|RIMO_THETN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|20516384|gb|AAM24599.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 436

 Score = 40.1 bits (93), Expect = 0.58,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 30/175 (17%)

Query: 59  QFIPQKEELN----ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           Q +   EE+     +L     D + D     +  I+   P    LK+   C   C FC  
Sbjct: 107 QIVDVIEEVKKGKKVLKYGHPDLLNDEG---IPRILTTPPYYAYLKIAEGCSNACSFCII 163

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP----------LILSHKRLQK 164
            ++ G  K   +     E A      +  + E+I    D           L+L      +
Sbjct: 164 PKLRGKYKSRKM-ENIIEEAQE--LARKGVKELIIIAQDTTKYGIDLYKKLMLP-----Q 215

Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYE 218
           +L+ L  I+ ++ +R         P  +  ELI+ +K   K V YI I   H  E
Sbjct: 216 LLRELSKIEELKWIRL----LYAYPDSVTDELIEEIKNNQKIVKYIDIPLQHSSE 266


>gi|300704632|ref|YP_003746235.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum
           CFBP2957]
 gi|299072296|emb|CBJ43629.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
           CFBP2957]
          Length = 373

 Score = 40.1 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 7/77 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +++            +LS ++ E  +    E   + ++  TGG+
Sbjct: 48  ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 106

Query: 154 PLILSH-KRLQKVLKTL 169
           PL+    +RL ++L  L
Sbjct: 107 PLLRKDIERLVEMLARL 123


>gi|224368087|ref|YP_002602250.1| NifB2 [Desulfobacterium autotrophicum HRM2]
 gi|223690803|gb|ACN14086.1| NifB2 [Desulfobacterium autotrophicum HRM2]
          Length = 424

 Score = 40.1 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 48/253 (18%), Positives = 88/253 (34%), Gaps = 65/253 (25%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQE----KSQIWEVI 148
            R+ L +   C + C FC R+    ++    + S       A+ Y+++    K  I  V 
Sbjct: 18  GRVHLPVAPRCNIQCNFCNRKFDCVNESRPGVCSSILSPFQAMEYLKQVVNRKKNISVVG 77

Query: 149 FTG-GDPLILSHKRLQ------------------------KVLKTLRY--IKHVQILRFH 181
             G GDP     + L                         + L  +    + HV I    
Sbjct: 78  IAGPGDPFANPEQTLTTIEMISKKYPDMLLCLASNGLNLPEYLDDIARFNVSHVSI---- 133

Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE----FSEEAIAAISRLANAGIIL 237
                     I+ ++   ++   K +        P +      E+ +A+++ L   GII+
Sbjct: 134 --TINAIDLAISEKIYSWVRFGKKSLA-------PGQGVKLLLEKQLASVAGLKERGIIV 184

Query: 238 LSQSVLLKGINDD-----PEILANLMRTFVELRIKPYYLHHPDLAAGT--SHFRLTI-EE 289
              +++L GIND       + +A +    +     PYY        G+  +H R    EE
Sbjct: 185 KVNTIVLPGINDHHVTDIAKEMAKMGVDLL--NCMPYY-----PNEGSNFAHLREPSREE 237

Query: 290 GQKIVASLKEKIS 302
             KI A  ++ + 
Sbjct: 238 IAKIQADAQKYLP 250


>gi|213023904|ref|ZP_03338351.1| hypothetical protein Salmonelentericaenterica_15757 [Salmonella
           enterica subsp. enterica serovar Typhi str. 404ty]
          Length = 30

 Score = 40.1 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 6/26 (23%), Positives = 10/26 (38%)

Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325
            +SG   P    ++ G   K  +D  
Sbjct: 1   MVSGYMVPRLAREIGGEPSKTPLDLQ 26


>gi|150390794|ref|YP_001320843.1| RNA modification protein [Alkaliphilus metalliredigens QYMF]
 gi|149950656|gb|ABR49184.1| RNA modification enzyme, MiaB family [Alkaliphilus metalliredigens
           QYMF]
          Length = 433

 Score = 40.1 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 15/125 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  YC +C      G  +       +    +  +       EV+ TG  
Sbjct: 141 KTRAFLKIQEGCNQYCAYCIIPYARGPIRSR--GKIEIIQEVQTLVNN-GFKEVVLTGIH 197

Query: 154 PLI----LSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                  L     L  VLK +  I+ ++ +R  S    ++P   +   +  L +  K   
Sbjct: 198 VASYGKDLGDHEGLLDVLKRVNAIEGLERIRLSS----LEPTLFSDAFLSALSKLEK--- 250

Query: 209 IAIHA 213
           I  H 
Sbjct: 251 ICDHF 255


>gi|289661642|ref|ZP_06483223.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
           pv. vasculorum NCPPB702]
          Length = 343

 Score = 40.1 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 62/187 (33%), Gaps = 32/187 (17%)

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125
           LP+    P+ D    PL+ +         L ++  C   C +C   + V    G      
Sbjct: 6   LPDLLTAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGFDSQQR 57

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS--- 182
           LS    E  +        + +V  TGG+PL+     L  ++  L  I+ ++ L   +   
Sbjct: 58  LSFDQLETLVRAFVS-VGVTKVRLTGGEPLLRRD--LPSLIARLSAIEGIEDLALTTNGT 114

Query: 183 ---RVPIVDPQ----RIN-------PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
              R  +   Q    RI        P L + +      +   +      E +      I+
Sbjct: 115 LLARQAVALRQAGLRRITVSMDALEPALFRRMSGDRGEIAQVLAGIAAAELAGFQRLKIN 174

Query: 229 RLANAGI 235
            +   GI
Sbjct: 175 CVVQRGI 181


>gi|326317352|ref|YP_004235024.1| molybdenum cofactor biosynthesis protein A [Acidovorax avenae
           subsp. avenae ATCC 19860]
 gi|323374188|gb|ADX46457.1| molybdenum cofactor biosynthesis protein A [Acidovorax avenae
           subsp. avenae ATCC 19860]
          Length = 386

 Score = 40.1 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G        G +LS ++             + ++  TGG+
Sbjct: 51  ISVTDRCNFRCSYCMPKEVFGKDYPYLSHGDLLSFEEISRLARVFLAH-GVRKIRLTGGE 109

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   + L+ +++ L  +
Sbjct: 110 PLL--RRHLENLVEQLAGL 126


>gi|227827329|ref|YP_002829108.1| radical SAM protein [Sulfolobus islandicus M.14.25]
 gi|229584545|ref|YP_002843046.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27]
 gi|227459124|gb|ACP37810.1| Radical SAM domain protein [Sulfolobus islandicus M.14.25]
 gi|228019594|gb|ACP55001.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27]
          Length = 350

 Score = 40.1 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 56/119 (47%), Gaps = 12/119 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  +  ++   CP+ C+ C R   +     + L+++++   L  I    ++  ++FTGGD
Sbjct: 7   PHLVFWEVTKACPLTCKHC-RANAIDKPLPSELNTEESRKLLEDIARFGKV-VIVFTGGD 64

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211
           PL  S   + ++++  + +  V  +      P   P  R++ E ++ +    + + I++
Sbjct: 65  PLSRSD--IFELMEYAKSLGLVVSI-----AP--SPSHRLDDETMKMISNYARYMSISL 114


>gi|212638682|ref|YP_002315202.1| 2-methylthioadenine synthetase [Anoxybacillus flavithermus WK1]
 gi|212560162|gb|ACJ33217.1| 2-methylthioadenine synthetase [Anoxybacillus flavithermus WK1]
          Length = 467

 Score = 40.1 bits (93), Expect = 0.59,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 11/124 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
             R  LK+   C  +C FC      G  +        +  +  +       +I    I T
Sbjct: 159 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIRQAQQLVD--AGYKEIVLTGIHT 216

Query: 151 GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           GG    +       +L+ +   +K ++ LR  S    ++  +I  E+I  L+++ K +  
Sbjct: 217 GGYGEDMKDYNFAMLLRDMDEQVKGLKRLRISS----IEASQITDEVIDVLRQSDK-IVR 271

Query: 210 AIHA 213
            +H 
Sbjct: 272 HLHI 275


>gi|322418241|ref|YP_004197464.1| Radical SAM domain-containing protein [Geobacter sp. M18]
 gi|320124628|gb|ADW12188.1| Radical SAM domain protein [Geobacter sp. M18]
          Length = 506

 Score = 39.7 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L   + C   C +CF +     +    LS+   +  L    +   I +V  +GGDPL   
Sbjct: 144 LMFSNDCHTNCAYCFAKGHCVPESKQ-LSTGRWKELLRE-AKSLGIEQVTLSGGDPLFRK 201

Query: 159 HKRLQKVLKTLRYIK 173
                K+++ L  + 
Sbjct: 202 DAL--KLIEELIDLD 214


>gi|83748466|ref|ZP_00945488.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
           UW551]
 gi|83724877|gb|EAP72033.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
           UW551]
          Length = 373

 Score = 39.7 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 7/77 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +++            +LS ++ E  +    E   + ++  TGG+
Sbjct: 48  ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 106

Query: 154 PLILSH-KRLQKVLKTL 169
           PL+    +RL ++L  L
Sbjct: 107 PLLRKDIERLVEMLARL 123


>gi|303239306|ref|ZP_07325834.1| protein of unknown function DUF512 [Acetivibrio cellulolyticus CD2]
 gi|302593092|gb|EFL62812.1| protein of unknown function DUF512 [Acetivibrio cellulolyticus CD2]
          Length = 440

 Score = 39.7 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 51/157 (32%), Gaps = 38/157 (24%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C   C FCF  ++    + T+    D      ++     +            +S   + 
Sbjct: 89  SCMNKCIFCFIDQLPKGMRDTLYFKDDDSRLSFFMGNYVTLT----------NMSFDDID 138

Query: 164 KVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
           +++K  +  I     +  H+              ++ L    K              + +
Sbjct: 139 RIIKYRMSPI----NVSVHT----------TNPDLRVLMLKNKN-------------AGD 171

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
            +  I +L + GI +  Q VL  GIND  E+  ++  
Sbjct: 172 VMLKIQKLIDGGIEVNCQIVLCAGINDGEELDRSISE 208


>gi|315608919|ref|ZP_07883891.1| RNA modification enzyme [Prevotella buccae ATCC 33574]
 gi|315249299|gb|EFU29316.1| RNA modification enzyme [Prevotella buccae ATCC 33574]
          Length = 434

 Score = 39.7 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 71/202 (35%), Gaps = 43/202 (21%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---------IWEV 147
             LK+   C  +C +C    M G      +     +  L  ++E              E+
Sbjct: 138 AYLKIAEGCDRHCAYCAIPLMTGRHVSRPM-----DEILDEVRELVAGGVKEFQVIAQEL 192

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--- 204
            + G D  +  H  + +++  +  I  V+ +R H   P   P     +L+  ++E     
Sbjct: 193 TYYGID--LDGHHHIAELISRMADIPGVKWIRLHYAYPNQFPM----DLLDVMRERPNVC 246

Query: 205 --KPVYIAIHAN-------HPYEFSEEAIAAISRLANA--GIILLSQSVLLKGI----ND 249
               + +  H +       H +   +E +  I ++  A  GI +   + LL G      D
Sbjct: 247 RYLDIALQ-HISDHILSRMHRHVTKQETVELIRKMREAVPGIHIR--TTLLVGFPGETED 303

Query: 250 DPEILANLMR--TFVELRIKPY 269
           D   L + +R   F  +    Y
Sbjct: 304 DFRQLVDFVREARFERMGAFAY 325


>gi|326203328|ref|ZP_08193193.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325986586|gb|EGD47417.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 468

 Score = 39.7 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 45/110 (40%), Gaps = 22/110 (20%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVG--SQKGTVLSSKDTEAALAYIQEK-SQIW 145
           + HR    ++L++   C + C +C            G  ++ +  + ++ Y+ +  ++I 
Sbjct: 79  LEHR-VQFLILQVTQSCNLRCDYCTYSGQYNTRGHSGKSMTWELAKKSIDYLYQHSNEIE 137

Query: 146 EVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
           +V  +  GG+PL L    ++K ++ ++                  P RI 
Sbjct: 138 KVRISFYGGEPL-LEIDLIKKCVEYVKE---------------TYPHRIT 171


>gi|255691410|ref|ZP_05415085.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
 gi|260623056|gb|EEX45927.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
          Length = 439

 Score = 39.7 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C      G  +   ++S   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    +++ L  I+ ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKTTGETFFDLVQALDQIEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|320353886|ref|YP_004195225.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122388|gb|ADW17934.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 289

 Score = 39.7 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 14/122 (11%)

Query: 95  DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTGG 152
           + ILL++   C    C FC    M   Q+ ++ S     A + Y          +    G
Sbjct: 15  NSILLQVTTGCSHNKCTFCG---MYKGQRFSIKSDDIIFADIDYASNYFSFARRLFLCDG 71

Query: 153 DPLILSHKRLQKVLKTLR-YIKHVQILRF--HSRVPIVDPQRI-NPELIQCLKEAGKPVY 208
           D LI+  +RL  +L+ +   +  V  +    +S+       R+   E ++ L++ G  + 
Sbjct: 72  DALIVPQQRLLAILQRIETRLPQVTRVGIYANSKSL-----RLKTVEELRQLRQHGLGIV 126

Query: 209 IA 210
             
Sbjct: 127 YM 128


>gi|310643623|ref|YP_003948381.1| arylsulfatase regulator (fe-s oxidoreductase) [Paenibacillus
           polymyxa SC2]
 gi|309248573|gb|ADO58140.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Paenibacillus
           polymyxa SC2]
          Length = 442

 Score = 39.7 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 35/224 (15%), Positives = 85/224 (37%), Gaps = 29/224 (12%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKG 123
           L       ED + +  +  +  + +R+    L+        C   C +CF ++   ++  
Sbjct: 60  LIECGYIVEDNMNEKAYVKVNLLKNRFESSNLMLTIAPTMACNFRCVYCFEKDQYHNKT- 118

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVI---FTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
             +S +  ++ + +++  +   + +   + GG+PLI   K++ ++ +    I     +++
Sbjct: 119 --MSEETAQSIVNFVKTNASKLDTLNVTWYGGEPLIA-MKQIVRISEDFLEICKENNIQY 175

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240
            +   I +   +N E +Q L   G         + P E   +    +        ++++ 
Sbjct: 176 -TASVITNGYLLNKEKVQTLISCGVNDIQVT-VDGPKEV-HDLRRPLVSGRGTFDVIMNN 232

Query: 241 SVLLKG-------INDDPEILANLMR--------TFVELRIKPY 269
              +KG       IN D +   NL          + +E  + PY
Sbjct: 233 LKQIKGMIKIFMRINTDQDNWLNLHEIVGFLKENSLLEN-VIPY 275


>gi|298530196|ref|ZP_07017598.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298509570|gb|EFI33474.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 348

 Score = 39.7 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 42/192 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L+L   C + C +C+     G+     L  ++  AA+    E      ++  GG+PL   
Sbjct: 31  LELSMACNLRCIYCY--AESGAPLENELRFEEITAAVDQAVELGARRIIVLGGGEPLAHP 88

Query: 159 H--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
                LQ + K    I    +    +         I  E  +   E G    I +     
Sbjct: 89  QILPVLQHIYKRGAAID---LFTNGT--------LITAETAEIFAELGVSPVIKM----- 132

Query: 217 YEFSEEAIAAIS--------------RLANAGII-----LLSQSVLLKGINDDPEILANL 257
              + E    ++               L  AG       L  Q+V+ +    + + L  +
Sbjct: 133 NSMNPEVQDRLAGRPGAFQDISQGFKHLQQAGYPSSGLALGVQTVICRH---NLDELPEM 189

Query: 258 MRTFVELRIKPY 269
                E  + PY
Sbjct: 190 WAWIRENSMVPY 201


>gi|325479090|gb|EGC82190.1| iron-only hydrogenase maturation rSAM protein HydG [Anaerococcus
           prevotii ACS-065-V-Col13]
          Length = 472

 Score = 39.7 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 5/117 (4%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
              E  +L   +ED + +      K + ++ Y +RI+L       + C   C +C     
Sbjct: 51  SHREAFVLLSCKEDDLNEEIFKLAKELKYKFYANRIVLFAPLYLSNYCVNGCSYCPYHGQ 110

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
             +     LS ++    +  +Q++      +  G DP+    + + + + T+  IKH
Sbjct: 111 NRTIPRRKLSQEEIREQVIALQDQGHKRLALEAGEDPVNNPLEYILESIHTIYNIKH 167


>gi|302874938|ref|YP_003843571.1| MiaB-like tRNA modifying enzyme YliG [Clostridium cellulovorans
           743B]
 gi|307690444|ref|ZP_07632890.1| MiaB-like tRNA modifying enzyme YliG [Clostridium cellulovorans
           743B]
 gi|302577795|gb|ADL51807.1| MiaB-like tRNA modifying enzyme YliG [Clostridium cellulovorans
           743B]
          Length = 445

 Score = 39.7 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 12/114 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
                L++   C   C +C    + G  + +       + A   +     + E+I    D
Sbjct: 145 KQTAYLRISEGCSNNCSYCIIPRIRGKYR-SRTKESILKEAEDLVSS--GVKELILVAQD 201

Query: 154 PL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
                  I + K L ++L+ L  IK ++ +R         P+ I  ELI  +  
Sbjct: 202 TTRYGIDIYNKKVLHELLRDLSKIKGIKWIRI----LYCYPEEIYDELIDEIAN 251


>gi|256825735|ref|YP_003149695.1| GTP cyclohydrolase subunit MoaA [Kytococcus sedentarius DSM 20547]
 gi|256689128|gb|ACV06930.1| GTP cyclohydrolase subunit MoaA [Kytococcus sedentarius DSM 20547]
          Length = 333

 Score = 39.7 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 86  LKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEK 141
             G+V R+      + + L+  C + C +C   E V    K  +LS ++   A+A +   
Sbjct: 3   TPGLVDRFGRVHTDLRISLIDKCNLRCTYCLPAEGVPWMAKDELLSREEL-RAIAAVAVA 61

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
           S I E+  TGG+PL+     L+ ++  L  ++
Sbjct: 62  SGITEIRLTGGEPLLRPD--LEDLVADLASLE 91


>gi|304440349|ref|ZP_07400238.1| MiaB family RNA modification enzyme [Peptoniphilus duerdenii ATCC
           BAA-1640]
 gi|304371101|gb|EFM24718.1| MiaB family RNA modification enzyme [Peptoniphilus duerdenii ATCC
           BAA-1640]
          Length = 444

 Score = 39.7 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 14/113 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GG 152
           +K+   C  +C +C   ++ G  +   L  ++    + Y+ E      ++        G 
Sbjct: 149 VKISEGCDNFCTYCIIPKLKGKNRSRKL--ENIVGEVKYLVENGTREVILIAQNTTDYGI 206

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           D  +    RL K+L  L  I+ ++ +R    V  + P     ELI   K   K
Sbjct: 207 D--LYGEYRLAKLLHELEKIEDLKWIR----VMYLYPDHFTKELIDEFKNNKK 253


>gi|301020499|ref|ZP_07184586.1| radical SAM domain protein [Escherichia coli MS 69-1]
 gi|300398687|gb|EFJ82225.1| radical SAM domain protein [Escherichia coli MS 69-1]
          Length = 445

 Score = 39.7 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 18/165 (10%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97
           LTP  A  ++   P  D   R  +P +  + +  E+      +  +  +         R+
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152
           +   +  C  +C FC F +           +    ++ E  A + + + + I  V F GG
Sbjct: 60  VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119

Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
            P  LS   L +++  LR    +     +    RV   D +RI+ 
Sbjct: 120 TPSALSAHDLARIINILREKLPLAPDCEITIEGRVLNFDAERIDA 164


>gi|189425283|ref|YP_001952460.1| MiaB-like tRNA modifying enzyme [Geobacter lovleyi SZ]
 gi|189421542|gb|ACD95940.1| MiaB-like tRNA modifying enzyme [Geobacter lovleyi SZ]
          Length = 442

 Score = 39.7 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 17/127 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  L++ + C   C +C    +      +V   +  EA    +       EV+ T   
Sbjct: 146 HTRAFLQIQNGCETGCSYCI-VPIARGPSRSVPPPEVLEAVSRLVAS--GYQEVVLTGIH 202

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
               G D  +     L  +++ L     V  LR  S    ++P  +  EL+   K++ + 
Sbjct: 203 MGAYGLD--LSPPGSLTALVQQLEDQNVVPRLRLGS----IEPNELTDELLTLFKKSSR- 255

Query: 207 VYIAIHA 213
           +   +H 
Sbjct: 256 LCHHLHI 262


>gi|73748729|ref|YP_307968.1| MiaB family tRNA modification protein [Dehalococcoides sp. CBDB1]
 gi|147669495|ref|YP_001214313.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. BAV1]
 gi|73660445|emb|CAI83052.1| tRNA modification enzyme, MiaB family [Dehalococcoides sp. CBDB1]
 gi|146270443|gb|ABQ17435.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. BAV1]
          Length = 416

 Score = 39.7 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 51/155 (32%), Gaps = 30/155 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  +K+   C  +C +C     RR         ++S  +   A  Y        E++ 
Sbjct: 126 RTRSFIKIQDGCDNFCTYCIVPFVRRYKNCRGVDDIISEINLRQAEGY-------QEIVL 178

Query: 150 TGGDP--LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-- 205
           TG +      S   L  +++ +     +  LR  S    + P  I   L+   K      
Sbjct: 179 TGTEIGEYTSSGFNLAGLIEAILERTRIPRLRLSS----LQPNEITLPLLALWKNRRLCN 234

Query: 206 PVYIAIH---------ANHPYEFSEEAI--AAISR 229
             ++A+           N PY  ++      AI R
Sbjct: 235 HFHMALQSGSDRILGLMNRPYSLTDYTRTLEAIRR 269


>gi|170694265|ref|ZP_02885419.1| transcriptional regulator, MarR family [Burkholderia graminis
           C4D1M]
 gi|170140688|gb|EDT08862.1| transcriptional regulator, MarR family [Burkholderia graminis
           C4D1M]
          Length = 181

 Score = 39.7 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTFVELRIKP 268
           E + +   A  +L   G  +L+Q   L+G +D D   L  L+  F+   I P
Sbjct: 102 ELTPQGHEAAQQLPGIGAAVLNQQ--LRGFSDADLATLIELLSRFIANGIDP 151


>gi|269139140|ref|YP_003295841.1| coproporphyrinogen III oxidase [Edwardsiella tarda EIB202]
 gi|267984801|gb|ACY84630.1| coproporphyrinogen III oxidase [Edwardsiella tarda EIB202]
 gi|304559064|gb|ADM41728.1| Radical SAM family protein HutW [Edwardsiella tarda FL6-60]
          Length = 466

 Score = 39.7 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 27/145 (18%)

Query: 39  LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--- 95
           +TP +A            A + IP  E    +P   + P+     +  +G  H       
Sbjct: 5   ITPYLA------------AAEGIPFPERWATMPWRHQQPLP--ADALAQGWQHLCQRTLP 50

Query: 96  ---RILLKLLHVCPVYCRFC--FRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
              R++   +  C  +C FC  ++       V      +      E+AL  +Q+ + I  
Sbjct: 51  PNKRLVYVHIPFCATHCTFCGFYQNRFSEQAVARYCDYLQREIALESALP-LQQSAPIHA 109

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY 171
           +   GG P  LS ++L +++  LR 
Sbjct: 110 IYLGGGTPSALSAEQLYRLITQLRS 134


>gi|251780641|ref|ZP_04823561.1| heme biosynthesis [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243084956|gb|EES50846.1| heme biosynthesis [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 451

 Score = 39.7 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 31/166 (18%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIA-LTPVI---ANLINPHNPNDPIARQFIPQKEELN 68
           DL + N +K ++ + +K +SN Y    ++        LI+       I            
Sbjct: 32  DLVDDNKLKSKE-ELVKALSNKYEENVISEAYDEILELIDNG-----IL----------- 74

Query: 69  ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
                 +D   +  HS +      Y   + L ++H C + C++CF  E        V+S 
Sbjct: 75  ----YSKDQYEEIAHSSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYHGHKGVMSL 128

Query: 129 KDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171
              + A+ Y+ ++S      E+   GG+P  +    ++ ++K  R 
Sbjct: 129 DVAKKAIDYVVKRSGPRKNIEIDLFGGEP-TMIMDTIKDIIKYARD 173


>gi|188590051|ref|YP_001922114.1| heme biosynthesis [Clostridium botulinum E3 str. Alaska E43]
 gi|188500332|gb|ACD53468.1| heme biosynthesis [Clostridium botulinum E3 str. Alaska E43]
          Length = 451

 Score = 39.7 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 31/166 (18%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIA-LTPVI---ANLINPHNPNDPIARQFIPQKEELN 68
           DL + N +K ++ + +K +SN Y    ++        LI+       I            
Sbjct: 32  DLVDDNKLKSKE-ELVKALSNKYEENVISEAYDEILELIDNG-----IL----------- 74

Query: 69  ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
                 +D   +  HS +      Y   + L ++H C + C++CF  E        V+S 
Sbjct: 75  ----YSKDQYEEIAHSSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYHGHKGVMSL 128

Query: 129 KDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171
              + A+ Y+ ++S      E+   GG+P  +    ++ ++K  R 
Sbjct: 129 DVAKKAIDYVVKRSGPRKNIEIDLFGGEP-TMIMDTIKDIIKYARD 173


>gi|84687584|ref|ZP_01015459.1| pyrroloquinoline quinone biosynthesis protein PqqE [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84664374|gb|EAQ10863.1| pyrroloquinoline quinone biosynthesis protein PqqE [Rhodobacterales
           bacterium HTCC2654]
          Length = 383

 Score = 39.7 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 49/268 (18%), Positives = 87/268 (32%), Gaps = 65/268 (24%)

Query: 79  GDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
            + +     G+   H  P  +LL++ H CP+ C +C    +   +    L+++D    L 
Sbjct: 6   HEPDSKLAPGVGTTHGLPVAVLLEVTHRCPLQCPYCS-NPLNLERPAAELATEDWVRVLH 64

Query: 137 YIQEKSQIWEVIFTGGDPL--------------------------ILSHKRLQKVLKTLR 170
            +     + +V F+GG+P+                           LS +RL  + +   
Sbjct: 65  EL-ADLGVLQVHFSGGEPMARRDIVELVAAATDAGLYSNLITSGVNLSRERLAALAEA-- 121

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
            + HVQI            Q    E    +              H  +       A    
Sbjct: 122 GLSHVQI----------SFQGSESETADRVGGYRNG--------HAKKL-----EAARLT 158

Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI-------KPYYLHHPDLAAGTSHF 283
             AG  L   +V+ +    +   L  ++   VEL           YY       A     
Sbjct: 159 REAGFPLTVNAVMHRQ---NLHQLPEMIDMAVELGAQRIEVANVQYYGWALRNRAALMPT 215

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYIL 311
              IE   +IVA  +E++ G+    Y++
Sbjct: 216 MEQIETCNRIVAEAEERLRGILMIDYVV 243


>gi|218530828|ref|YP_002421644.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
           chloromethanicum CM4]
 gi|240139398|ref|YP_002963873.1| molybdenum biosynthetic protein A [Methylobacterium extorquens AM1]
 gi|218523131|gb|ACK83716.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
           chloromethanicum CM4]
 gi|240009370|gb|ACS40596.1| molybdenum biosynthetic protein A [Methylobacterium extorquens AM1]
          Length = 344

 Score = 39.7 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 39/173 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C   +M    K  +L+ ++ +           + ++  TGG+PL+  
Sbjct: 30  ISVTDRCDFRCAYCMSEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRR 88

Query: 159 HKRLQKVLKTLRYIKHVQILRF--------HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
              +  + + L    H++             S++      R  PEL + L      V + 
Sbjct: 89  D--IMHLFRRLSR--HLKSGTLDELTLTTNGSQL-----ARFAPELAE-LGVRRINVSLD 138

Query: 211 IHANHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKGINDD 250
                      +   AI+R                AGI +   +V LKG+N+D
Sbjct: 139 T-------LDPDKFRAITRRGDLSVVLAGIEAARAAGIKVKINAVALKGVNED 184


>gi|187735294|ref|YP_001877406.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835]
 gi|187425346|gb|ACD04625.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835]
          Length = 415

 Score = 39.7 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 16/115 (13%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF 149
           R P  ++  +   C + C  C+        KG +    D +   A I      ++  ++F
Sbjct: 45  RKP-IVVWNITRTCNLKCVHCYADASARKFKGEL----DWDQCCAVIDDLADYKVNALLF 99

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           +GG+PL+    R  ++L+     K +++          +  RI PE     KE G
Sbjct: 100 SGGEPLVHP--RFMELLERATG-KGLKV------TISTNGTRITPEAAARFKELG 145


>gi|157112872|ref|XP_001657654.1| molybdopterin cofactor synthesis protein a [Aedes aegypti]
 gi|108884620|gb|EAT48845.1| molybdopterin cofactor synthesis protein a [Aedes aegypti]
          Length = 481

 Score = 39.7 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 54/127 (42%), Gaps = 11/127 (8%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYI 138
               SPL     R+   + + L   C + C++C   E V  + K  +L++ +    LA +
Sbjct: 100 QETDSPLTDNFGRFHSYLRISLTERCNLRCKYCMPAEGVQLTPKDNLLTTDEVLR-LATL 158

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH------SRVPIVDPQRI 192
             +  + ++  TGG+P +     L ++++ L+ I  ++ +         +R  +   QR 
Sbjct: 159 FVEQGVRKIRLTGGEPTVRKD--LPEIIERLKRIPLLESVGITTNGLMLTRQLVGL-QRA 215

Query: 193 NPELIQC 199
             + +  
Sbjct: 216 GLDALNI 222


>gi|78044427|ref|YP_360054.1| radical SAM domain-containing protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996542|gb|ABB15441.1| radical SAM domain protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 331

 Score = 39.7 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 80/216 (37%), Gaps = 47/216 (21%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C +YC  C+R    G++    LS+++ +A +  I + +    +IF+GG+PL+
Sbjct: 3   VSWNTTNQCNLYCEHCYRDA--GAKVEEELSTEEGKALIDEIVK-AGFKIMIFSGGEPLM 59

Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
                + +++       +K V    F +   +     I  E+ Q LK+AG  + + I   
Sbjct: 60  RED--ILELVDYASQKGLKPV----FGTNGTL-----ITLEMAQKLKKAG-ALAMGISL- 106

Query: 215 HPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                  E              A+  +     AG+     + +++   D+ E L +    
Sbjct: 107 --DSVDPEKHDRFRASPGSWEKAVEGMKNCKAAGLPFQIHTTVVEWNYDEVEQLTDFA-- 162

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
            VE+    +++           F +       I   
Sbjct: 163 -VEIGAIAHHIF----------FLVPTGRAVNIEQE 187


>gi|295400797|ref|ZP_06810773.1| Radical SAM domain protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111351|ref|YP_003989667.1| radical SAM protein [Geobacillus sp. Y4.1MC1]
 gi|294977060|gb|EFG52662.1| Radical SAM domain protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216452|gb|ADP75056.1| Radical SAM domain protein [Geobacillus sp. Y4.1MC1]
          Length = 390

 Score = 39.7 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 60/195 (30%), Gaps = 23/195 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGG 152
           P  ++ ++   C + C  C            +   +  +     Y      +   +FTGG
Sbjct: 27  PFIVIWEVTRACQLKCVHCRADAQPVPDPRELTHEEGIKLIDDIYEMNNPML---VFTGG 83

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVYIAI 211
           D ++     L ++      IK    +       P V  +++       L   G  +    
Sbjct: 84  DCMMRED--LFELAD--YAIKKGMRVSITPSATPNVTKEKMEKAKQVGLSRWGFSLDGPT 139

Query: 212 HANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
              H          E + E I  ++ L    + L   +V+ +   D  E +A L+     
Sbjct: 140 PEIHDRFRGTPGSFELTIEKIKYLNEL---NMPLQINTVISRYNYDHLEEMAKLVADLKA 196

Query: 264 LRIKPYYLHHPDLAA 278
           +    +Y+       
Sbjct: 197 VM---WYIFLLVPTG 208


>gi|169832127|ref|YP_001718109.1| radical SAM domain-containing protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638971|gb|ACA60477.1| Radical SAM domain protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 453

 Score = 39.7 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 40/230 (17%), Positives = 85/230 (36%), Gaps = 46/230 (20%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPL 155
            ++ +   C + C  C    +  +     L+ +     L   +E     +V+ F+GG+P 
Sbjct: 102 AIIDVTQACDLKCPAC----LADAGGSGFLAPEQVARLLDVYRECEGNPDVLQFSGGEPT 157

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHA 213
           +     L ++L  L   K +++++ ++        RI  +   +  L E    VY+    
Sbjct: 158 LHP--ELFELL-ALARAKGIRLVQLNTNGL-----RIARDDAFLARLAEFRPSVYL---- 205

Query: 214 NHPYEFSEEAIA----------------AISRLANAGIILLSQSVLLKGINDDPEILANL 257
               +F   +                  A+ RL++ GI ++  + ++ G+ND    L +L
Sbjct: 206 ----QFDGLSAVVYRRIRGADLLADKLLAVERLSDCGIPIVLSATVVPGVND--GELGDL 259

Query: 258 MR-TFVELRIKPYYLHHPDLAAGTSHFRL-TIEEGQ--KIVASLKEKISG 303
           +R      RI+   +  P    G        +       I+  L+ +  G
Sbjct: 260 VRFALQNPRIR-GLMFQPVAHIGRHRLEFDPLNRITLPDILKGLERQTEG 308


>gi|163852070|ref|YP_001640113.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
           extorquens PA1]
 gi|163663675|gb|ABY31042.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
           extorquens PA1]
          Length = 344

 Score = 39.7 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 39/173 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C   +M    K  +L+ ++ +           + ++  TGG+PL+  
Sbjct: 30  ISVTDRCDFRCAYCMSEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRR 88

Query: 159 HKRLQKVLKTLRYIKHVQILRF--------HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
              +  + + L    H++             S++      R  PEL + L      V + 
Sbjct: 89  D--IMHLFRRLSR--HLKSGTLDELTLTTNGSQL-----ARFAPELAE-LGVRRINVSLD 138

Query: 211 IHANHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKGINDD 250
                      +   AI+R                AGI +   +V LKG+N+D
Sbjct: 139 T-------LDPDKFRAITRRGDLSVVLAGIEAARAAGIKVKINAVALKGVNED 184


>gi|15898641|ref|NP_343246.1| coenzyme PQQ synthesis protein E (pqqE-5) [Sulfolobus solfataricus
           P2]
 gi|284175851|ref|ZP_06389820.1| coenzyme PQQ synthesis protein E (pqqE-5) [Sulfolobus solfataricus
           98/2]
 gi|13815098|gb|AAK42036.1| Coenzyme PQQ synthesis protein E (pqqE-5) [Sulfolobus solfataricus
           P2]
 gi|261603136|gb|ACX92739.1| Radical SAM domain protein [Sulfolobus solfataricus 98/2]
          Length = 350

 Score = 39.7 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 16/121 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  +  ++   CP+ C+ C R   +       LS+++++  L  I    ++  ++FTGGD
Sbjct: 7   PHLVFWEVTKACPLSCKHC-RANAIDKPLPGELSTEESKKLLEDIARFGKV-VIVFTGGD 64

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIA 210
           PL  S      + + + Y K + ++        + P    R+  E ++ +    + + I+
Sbjct: 65  PLSRSD-----IFEIMEYAKSLGLI------VSIAPSPSYRLRDETMKMISNYARYMSIS 113

Query: 211 I 211
           I
Sbjct: 114 I 114


>gi|323692405|ref|ZP_08106641.1| hypothetical protein HMPREF9475_01504 [Clostridium symbiosum
           WAL-14673]
 gi|323503545|gb|EGB19371.1| hypothetical protein HMPREF9475_01504 [Clostridium symbiosum
           WAL-14673]
          Length = 324

 Score = 39.7 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 30/163 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQEKS--QIWEVIFTGGD 153
           + +   C + C +C        +    LS K     E  LA+ +E +   I  +  TGG+
Sbjct: 16  VSVTDRCNLNCAYC------RPENSPFLSRKALLTSEEILAFCREAAILGIRHIKITGGE 69

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+ +      +++ L+    ++ +   +         +  E +  LKEAG    I I  
Sbjct: 70  PLLRTDC--CSIVEKLKKTPGIETVTLTTNGL------LLSEHLGRLKEAGID-GINISM 120

Query: 214 NHPYE-----FS-----EEAIAAISRLANAGIILLSQSVLLKG 246
           + P        +      E + +I   A  GI +    V++ G
Sbjct: 121 DTPDRACYAALTGSDRLPELLDSIRSTAGLGIPMKINCVIMDG 163


>gi|222445792|ref|ZP_03608307.1| hypothetical protein METSMIALI_01435 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435357|gb|EEE42522.1| hypothetical protein METSMIALI_01435 [Methanobrevibacter smithii
           DSM 2375]
          Length = 234

 Score = 39.7 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 8/68 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           L+  +  CP+ CR+C   E++            K+ + A  +I        V+ +GG+PL
Sbjct: 19  LVIFMSKCPLACRYCHNAELLDDNTQLSFEEIKKEIDDAADFIDA------VVISGGEPL 72

Query: 156 ILSHKRLQ 163
           + S   ++
Sbjct: 73  VQSDAVIE 80


>gi|146296852|ref|YP_001180623.1| RNA modification protein [Caldicellulosiruptor saccharolyticus DSM
           8903]
 gi|145410428|gb|ABP67432.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 434

 Score = 39.7 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 13/126 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  +K+   C  +C +C      GS     LSS   + +         +   E + TG
Sbjct: 141 RTRAFIKIEEGCEQFCSYCIIPYARGSVVSRSLSSILDEVQRL-----ASNGYKEFVITG 195

Query: 152 GD-PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
            +             L  V++ +  I+ V+ +R  S  PIV  +     L++ +++    
Sbjct: 196 INISAYGKDLDYKVTLVDVIEEISKIEKVRRIRLSSLEPIVMKEDFIKRLVK-IEKLCHH 254

Query: 207 VYIAIH 212
           +++++ 
Sbjct: 255 LHLSLQ 260


>gi|295100395|emb|CBK97940.1| MiaB-like tRNA modifying enzyme [Faecalibacterium prausnitzii L2-6]
          Length = 431

 Score = 39.7 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 18/119 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  +K+   C   C +C      G  +    S +   A L  +   S   EV+ +   
Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--SEESILAELRQLAA-SGYREVVLSAIS 197

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D        L ++++    ++ ++ +R  S    +DP  + PE I  L    K
Sbjct: 198 LPSYGLDTGT----NLVELVEKCARVEGIERIRLGS----LDPDMLTPESITRLAAVDK 248


>gi|298529710|ref|ZP_07017113.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511146|gb|EFI35049.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 355

 Score = 39.7 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 4/78 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L   ++C   CRFC   +  G +   V+S      A+   +    I E+   GG   +  
Sbjct: 58  LNYTNICSNACRFCAYSKRAGEEGAYVMSVDQIRVAVKS-RMHEPIDEIHVVGG---LNP 113

Query: 159 HKRLQKVLKTLRYIKHVQ 176
                  L+ L+ IK ++
Sbjct: 114 DLPYDYYLEMLKSIKEIR 131


>gi|207743614|ref|YP_002260006.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum
           IPO1609]
 gi|206595013|emb|CAQ61940.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum
           IPO1609]
          Length = 391

 Score = 39.7 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 7/77 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +++            +LS ++ E  +    E   + ++  TGG+
Sbjct: 66  ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 124

Query: 154 PLILSH-KRLQKVLKTL 169
           PL+    +RL ++L  L
Sbjct: 125 PLLRKDIERLVEMLARL 141


>gi|126460321|ref|YP_001056599.1| radical SAM domain-containing protein [Pyrobaculum calidifontis JCM
           11548]
 gi|126250042|gb|ABO09133.1| Radical SAM domain protein [Pyrobaculum calidifontis JCM 11548]
          Length = 378

 Score = 39.7 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 68/168 (40%), Gaps = 30/168 (17%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-F 149
           H  P  +  +    CP+ C+ C R + +       LS+++ +  +  + E      ++  
Sbjct: 12  HEAPLLVFWESTKACPLACKHC-RADAILKPLPGELSTEEGKRLIEQVAEFGDPKPLLII 70

Query: 150 TGGDPLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPV 207
           TGGDPL+ +   L +++     +   V +       P V    ++ E ++ +K +G K +
Sbjct: 71  TGGDPLMRAD--LFELVDYANSLGVPVSL------APAVSKS-LDDEALRRIKSSGVKSI 121

Query: 208 YIA-------IHANHPYEFS------EEAIAAISRLANAGIILLSQSV 242
            I+        H     E         E ++AI R  + GI +   +V
Sbjct: 122 SISLDGATAETH----DELRGVPGSFAETVSAIKRALDLGISVQVNTV 165


>gi|134046659|ref|YP_001098144.1| radical SAM domain-containing protein [Methanococcus maripaludis
           C5]
 gi|132664284|gb|ABO35930.1| Radical SAM domain protein [Methanococcus maripaludis C5]
          Length = 369

 Score = 39.7 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 20/139 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI--------FT 150
           +++   CP  CRFC   ++ G      +  +  E+ +  ++    I  V          T
Sbjct: 138 IEITRGCPYNCRFCQTPQIFGKN----IRHRSIESIVKIVKTMGDIRFVTPNAFSYGSKT 193

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G  P   + ++L+K++K L  IK  + L F +    V P+ +  E +  + +     YI 
Sbjct: 194 GTKP---NIEKLEKLMKHLFEIK--KRLFFGTFPSEVRPEFVTSETLDLINKYCDNRYI- 247

Query: 211 IHANHPYEFSEEAIAAISR 229
            H       S+E +  I R
Sbjct: 248 -HFG-AQSGSDEVLKHIRR 264


>gi|326791736|ref|YP_004309557.1| biotin and thiamin synthesis associated [Clostridium lentocellum
           DSM 5427]
 gi|326542500|gb|ADZ84359.1| biotin and thiamin synthesis associated [Clostridium lentocellum
           DSM 5427]
          Length = 472

 Score = 39.7 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 4/89 (4%)

Query: 90  VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
              Y +RI+    L L + C   C +C             L+ ++  A +  +Q+     
Sbjct: 77  QRFYGNRIVMFAPLYLSNYCVNGCIYCPYHHKNKHITRKKLTQEEIRAEVIALQDMGHKR 136

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
             +  G DP       + + +KT+  IKH
Sbjct: 137 LALEAGEDPANNPLDYILESIKTIYSIKH 165


>gi|261349664|ref|ZP_05975081.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Methanobrevibacter smithii DSM 2374]
 gi|288861622|gb|EFC93920.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Methanobrevibacter smithii DSM 2374]
          Length = 234

 Score = 39.7 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 8/68 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           L+  +  CP+ CR+C   E++            K+ + A  +I        V+ +GG+PL
Sbjct: 19  LVIFMSKCPLACRYCHNAELLDDNTQLSFEEIKKEIDDAADFIDA------VVISGGEPL 72

Query: 156 ILSHKRLQ 163
           + S   ++
Sbjct: 73  VQSDAVIE 80


>gi|153806285|ref|ZP_01958953.1| hypothetical protein BACCAC_00541 [Bacteroides caccae ATCC 43185]
 gi|149130962|gb|EDM22168.1| hypothetical protein BACCAC_00541 [Bacteroides caccae ATCC 43185]
          Length = 436

 Score = 39.7 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 71/227 (31%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G      +  ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISKPI--EEILDEVRYLVSQGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G D  +   + L ++++ +  I  V+ +R H       P     +L + ++E G      
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPIDLFRVMRERGN----- 244

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
                           +                L+ I+D+   +  LMR           
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
                         +T E+  +++   ++++ G+  +   ++  PG 
Sbjct: 268 --------------VTKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE 300


>gi|114798903|ref|YP_759322.1| radical SAM domain-containing protein [Hyphomonas neptunium ATCC
           15444]
 gi|114739077|gb|ABI77202.1| radical SAM domain protein [Hyphomonas neptunium ATCC 15444]
          Length = 311

 Score = 39.7 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 16/149 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L    +C + C  C+      + +   L+  D    L  + E+++I     TGG+P +  
Sbjct: 36  LNTGTLCNIECANCYIESSPKNDRLVYLTLADVLPFLDELTEQAEIG---ITGGEPFMCP 92

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG----KPVYIAIH-- 212
              L  +   L     + +L    R P++ P R+   L       G      V +  H  
Sbjct: 93  D-ILAIMGAALVRGHSLLVLTNAMR-PMMRP-RVQAGLKDLAARYGARMTLRVSLDSHDA 149

Query: 213 -ANHPYEFSEEAIAAI---SRLANAGIIL 237
             N           A    + LA AGI +
Sbjct: 150 ALNDAERGEGAFAEACTGLAWLAQAGIPV 178


>gi|71281310|ref|YP_268103.1| radical SAM domain-containing protein [Colwellia psychrerythraea
           34H]
 gi|71147050|gb|AAZ27523.1| radical SAM domain protein [Colwellia psychrerythraea 34H]
          Length = 300

 Score = 39.7 bits (92), Expect = 0.66,   Method: Composition-based stats.
 Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 8/87 (9%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKS-QIWEVIFTGG 152
           ++L++ + C    C FC   +M  S+       K    E  +  I         V    G
Sbjct: 20  LILQVTNGCSWNKCTFC---DMYTSEDKKFKPKKVDVIEQEILKIANSGISTRRVFLADG 76

Query: 153 DPLILSHKRLQKVLKTL-RYIKHVQIL 178
           D ++L   RL+++L+ +  ++  V  +
Sbjct: 77  DAMMLPFNRLKEILELIKLHLPQVSRV 103


>gi|291166144|gb|EFE28190.1| radical SAM domain protein [Filifactor alocis ATCC 35896]
          Length = 462

 Score = 39.7 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C +CF ++     K  ++S +  + AL ++ E S      EV F GG+PL
Sbjct: 101 LHVAHTCNLACDYCFAKQGKYHGKDGLMSFEVGKKALDFLIEHSGTRTNLEVDFFGGEPL 160

Query: 156 ILSHKRLQKVLK 167
            ++ + +++++ 
Sbjct: 161 -MNWEVVKQLVA 171


>gi|255524216|ref|ZP_05391175.1| MiaB-like tRNA modifying enzyme YliG [Clostridium carboxidivorans
           P7]
 gi|296185337|ref|ZP_06853747.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           carboxidivorans P7]
 gi|255512041|gb|EET88322.1| MiaB-like tRNA modifying enzyme YliG [Clostridium carboxidivorans
           P7]
 gi|296050171|gb|EFG89595.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium
           carboxidivorans P7]
          Length = 446

 Score = 39.7 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 12/111 (10%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
              +++   C  +C +C   ++ G  +    S ++       + ++  + E+I    D  
Sbjct: 148 TAYIRIAEGCNNFCTYCIIPKIRGKYRSR--SMENIIKEAQSLAQQ-GVKEIILVAQDTT 204

Query: 156 -----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
                I   K L ++++ L  I+++  +R         P+ I  ELI  + 
Sbjct: 205 RYGTDIYGKKALSELIRKLSKIENIHWIRI----LYCYPEEITEELIDEIA 251


>gi|254515478|ref|ZP_05127538.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium
           NOR5-3]
 gi|219675200|gb|EED31566.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium
           NOR5-3]
          Length = 361

 Score = 39.7 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 28/207 (13%)

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFCFRRE 116
            +P K    ++   +   +   + +    ++ R+  R+    L +   C   C +C   +
Sbjct: 5   ILPVKSAQRLVTAAQRSTLRAMHENTPPTLIDRFGRRVDYLRLSVTDRCDFRCVYCMAED 64

Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
           M    K  +L+ ++             + ++  TGG+PL+     + ++++ L  +  + 
Sbjct: 65  MTFVPKSEILTLEELAQVAQAF-VNLGVRKIRLTGGEPLV--RHNIMQLVEQLGAMPGLD 121

Query: 177 IL---RFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFS--------EEAI 224
            L      S++     QR    L Q L +AG K + I++ +  P  F         E+ I
Sbjct: 122 ELVMTTNGSQL-----QR----LAQPLSDAGVKRLNISLDSLQPRRFRQITRVGHLEQVI 172

Query: 225 AAISRLANAGI-ILLSQSVLLKGINDD 250
           A I     AG   L   +V+++G NDD
Sbjct: 173 AGIDAACAAGFERLRINAVIMRGDNDD 199


>gi|315651497|ref|ZP_07904518.1| 2-methylthioadenine synthetase [Eubacterium saburreum DSM 3986]
 gi|315486232|gb|EFU76593.1| 2-methylthioadenine synthetase [Eubacterium saburreum DSM 3986]
          Length = 440

 Score = 39.7 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 41/116 (35%), Gaps = 16/116 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150
             LK+   C   C +C    + G+ +   L       A         I E+I        
Sbjct: 146 AYLKIAEGCNKNCTYCIIPSLRGNYRSYPL-DDLIAQAKD--LATQGIKELILVAQETTL 202

Query: 151 -GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            G D  I   K L K+LK L  I+ ++ +R         P+ I  ELI  +    K
Sbjct: 203 YGVD--IYGKKTLPKLLKELAKIEGIEWIRI----LYCYPEEITDELIDVIASEDK 252


>gi|294673495|ref|YP_003574111.1| 30S ribosomal protein S12 methylthiotransferase RimO [Prevotella
           ruminicola 23]
 gi|294473743|gb|ADE83132.1| ribosomal protein S12 methylthiotransferase RimO [Prevotella
           ruminicola 23]
          Length = 437

 Score = 39.7 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 46/112 (41%), Gaps = 14/112 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIW----EVIFT 150
             +K+   C  +C +C    + G  K      ++    + Y+  Q   +      E+ + 
Sbjct: 137 AYIKISEGCDRHCAYCAIPLITG--KHQSRPMQEILDEVRYLVSQGTKEFNVIAQELTYY 194

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           G D  +   + + ++++ +  I  V+ +R H   P   P     +L++ ++E
Sbjct: 195 GVD--LDGKQHIAELIEQMADIPGVEWIRLHYAYPTHFPW----DLLRVIRE 240


>gi|251770958|gb|EES51543.1| radical SAM family protein [Leptospirillum ferrodiazotrophum]
          Length = 357

 Score = 39.7 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 69/199 (34%), Gaps = 51/199 (25%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKS----QIWEVIF 149
            + L     C + CRFC R   +G  +    +        A  +++        I  ++F
Sbjct: 101 TLCLSTQAGCGIGCRFC-RTASMGLTRNLSTAEILSQWLLAARFVETLPPGESHIDHIVF 159

Query: 150 TG-GDPLILSHKRLQKVLKTLRYIKHV-------QILRFHSRVPIVDPQRINPELIQCLK 201
            G G+PL      L+ ++  +R + H        + +   +   +  P RI+      L 
Sbjct: 160 MGMGEPL----ANLEALIPAIRSLTHPDGAGLSPRRITVSTSGLV--P-RIDT-----LG 207

Query: 202 EAGKPVYIAIHANHP-----YEFSE--------EAIAAISRLANAGIILLS------QSV 242
           EA   V +AI    P      E           E +AA  R       L +      + V
Sbjct: 208 EANTGVRLAISLCAPDDALRREIMPVGRIYSIEEILAACRRF-----PLRNRDRITFEYV 262

Query: 243 LLKGINDDPEILANLMRTF 261
           LL G+ND P     L R  
Sbjct: 263 LLAGVNDSPLQARQLGRLL 281


>gi|238619478|ref|YP_002914303.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4]
 gi|238380547|gb|ACR41635.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4]
          Length = 350

 Score = 39.7 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 12/119 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  +  ++   CP+ C+ C R   +       L+++++   L  I    ++  ++FTGGD
Sbjct: 7   PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELNTEESRKLLEDIARFGKV-VIVFTGGD 64

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211
           PL  S   + ++++  + +  V  +      P   P  R++ E ++ +    + + I++
Sbjct: 65  PLSRSD--IFELMEYAKSLGLVVSI-----AP--SPSHRLDDETMKMISNYARYMSISL 114


>gi|164686351|ref|ZP_02210381.1| hypothetical protein CLOBAR_02789 [Clostridium bartlettii DSM
           16795]
 gi|164601953|gb|EDQ95418.1| hypothetical protein CLOBAR_02789 [Clostridium bartlettii DSM
           16795]
          Length = 441

 Score = 39.7 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 36/154 (23%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C   C FCF  ++    + T+    D ++ L+++Q       V  T      +S + + 
Sbjct: 93  SCRNKCVFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FVTLT-----NMSEEDID 142

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
            ++K    I  +  +  H+  P                E  + +    HA        + 
Sbjct: 143 NIIK--YRISPIN-ISVHTTNP----------------ELRRKMITNKHA-------GKL 176

Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
           I  ++RLA+A I +  Q VL  G ND  E+   L
Sbjct: 177 IDTMNRLADAHIEMNCQIVLCPGYNDKEELDRTL 210


>gi|150021472|ref|YP_001306826.1| biotin synthase [Thermosipho melanesiensis BI429]
 gi|149793993|gb|ABR31441.1| Radical SAM domain protein [Thermosipho melanesiensis BI429]
          Length = 341

 Score = 39.7 bits (92), Expect = 0.67,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 52/144 (36%), Gaps = 15/144 (10%)

Query: 74  REDPIGDNNHSPLKGIVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
             D   D   S    I  +Y       R +++  + C + C +C  R    + K   ++ 
Sbjct: 23  STDKYNDEILSLADEIRGKYVGNEVHIRAIIEFSNYCKMDCLYCGLRAPNKNLKRYRMTP 82

Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
           ++       I +K+    V+ +G DP   +   L+ ++  ++ +     L    R     
Sbjct: 83  EEIYKRAQLIAQKNIKTIVLQSGEDPFY-TTDILKDLIIKIKSLDIAITLSIGER----- 136

Query: 189 PQRINPELIQCLKEAGKPVYIAIH 212
               + E  +  KE G   Y+  H
Sbjct: 137 ----DFEEYKIWKETGADRYLMRH 156


>gi|323474371|gb|ADX84977.1| Fe-S oxidoreductase family [Sulfolobus islandicus REY15A]
 gi|323476690|gb|ADX81928.1| Radical SAM domain protein [Sulfolobus islandicus HVE10/4]
          Length = 350

 Score = 39.7 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 12/119 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  +  ++   CP+ C+ C R   +       L+++++   L  I    ++  ++FTGGD
Sbjct: 7   PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELNTEESRKLLEDIARFGKV-VIVFTGGD 64

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211
           PL  S   + ++++  + +  V  +      P   P  R++ E ++ +    + + I++
Sbjct: 65  PLSRSD--IFELMEYAKSLGLVVSI-----AP--SPSHRLDDETMKMISNYTRYMSISL 114


>gi|258544941|ref|ZP_05705175.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Cardiobacterium hominis
           ATCC 15826]
 gi|258519861|gb|EEV88720.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Cardiobacterium hominis
           ATCC 15826]
          Length = 456

 Score = 39.7 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 15/124 (12%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
              + ++  C  YC FC      G +        D  A  A +  +  + E+   G +  
Sbjct: 151 TAFVSVMEGCSKYCTFCVVPYTRGEEVSRPF--DDVIAECASLAAQ-GVREINLLGQNVN 207

Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                        L  +++ +  I  +  +RF +  P+         LI+  +     + 
Sbjct: 208 AYRGALFDGGTADLALLIEYVAAIDGIDRVRFTTSHPV----EFTDNLIEVYRRVP-QLV 262

Query: 209 IAIH 212
             +H
Sbjct: 263 SHLH 266


>gi|194334590|ref|YP_002016450.1| RNA modification enzyme, MiaB family [Prosthecochloris aestuarii
           DSM 271]
 gi|194312408|gb|ACF46803.1| RNA modification enzyme, MiaB family [Prosthecochloris aestuarii
           DSM 271]
          Length = 452

 Score = 39.7 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 45/136 (33%), Gaps = 20/136 (14%)

Query: 85  PLKGIVHRY---PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAY 137
           P   ++ +      R  LK+   C   C +C     R   +      VL      A   Y
Sbjct: 138 PAHSLIEKREMGRSRAFLKIQDGCDYGCGYCAIPLARGRSLSIDPDVVLDGARALAGAGY 197

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
                   E++ TG +        L      LR +  V + R   RV  ++P  +  ELI
Sbjct: 198 C-------EIVLTGVNIAAYRFGELD-FAGLLRLLDQVDVQRI--RVSSIEPDCLTDELI 247

Query: 198 QCLKEAGKPVYIAIHA 213
             +  + +   I  H 
Sbjct: 248 DVVASSQR---IMPHF 260


>gi|295696236|ref|YP_003589474.1| RNA modification enzyme, MiaB family [Bacillus tusciae DSM 2912]
 gi|295411838|gb|ADG06330.1| RNA modification enzyme, MiaB family [Bacillus tusciae DSM 2912]
          Length = 484

 Score = 39.7 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 11/103 (10%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILSH 159
            C  YC +C        ++ + L  +D  A +  + E   I EV   G +     L L  
Sbjct: 195 GCNKYCTYCI-VPFTRGRERSRLP-EDVVAEVKQLAE-EGIREVTLLGQNVNDYGLDLGD 251

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
                +L+ +  I  ++ +RF +     +P     +LI  +  
Sbjct: 252 VDFADLLQQVARIPGIERVRFTTS----NPWNFTDKLIDVIAA 290


>gi|148643466|ref|YP_001273979.1| molybdenum cofactor biosynthesis protein A [Methanobrevibacter
           smithii ATCC 35061]
 gi|89953725|gb|ABD83341.1| MoaA [Methanobrevibacter smithii]
 gi|148552483|gb|ABQ87611.1| molybdopterin cofactor biosynthesis protein A, MoaA
           [Methanobrevibacter smithii ATCC 35061]
          Length = 309

 Score = 39.7 bits (92), Expect = 0.68,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 70/189 (37%), Gaps = 27/189 (14%)

Query: 92  RYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +Y   IL   + + + C   C +C             +++ +       I +   + ++ 
Sbjct: 9   KYERPILSLRITITNKCNENCLYC--HHDGMDDSQEEMNADEIYRICE-IAKNIGVRKIR 65

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-V 207
            +GG+PLI     + +++  +  +    I        I     +  +  + LKEAG   V
Sbjct: 66  ISGGEPLIRKD--IVEIVSKIASLDFDDI-------SITSNGTLLGKYAKDLKEAGLNRV 116

Query: 208 YIAIHANHP--------YEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258
            I++   +P            E +   I +    G+  +    VL+KGIN++   + ++ 
Sbjct: 117 NISLDTLNPETYKKVTTKNLLESSKNGILKAVEVGLYPVKINMVLMKGINEN--EVDDMF 174

Query: 259 RTFVELRIK 267
               E  I 
Sbjct: 175 EFCKEHGII 183


>gi|301163425|emb|CBW22976.1| putative oxidoreductase [Bacteroides fragilis 638R]
          Length = 432

 Score = 39.7 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G      +  ++    + Y+             E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPI--EEILDEVRYLVSNGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G D  +   + L ++++ +  I  V+ +R H       P     EL + ++E 
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPKELFRVMRER 242


>gi|90418074|ref|ZP_01225986.1| molybdenum cofactor biosynthesis protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90337746|gb|EAS51397.1| molybdenum cofactor biosynthesis protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 352

 Score = 39.7 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 27/167 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C   +M    K  +L+ ++ +   +       + ++  TGG+PL+  
Sbjct: 37  VSVTDRCDFRCVYCMAEDMTFLPKRDLLTLEELDRLSSAFIA-KGVRKLRLTGGEPLV-- 93

Query: 159 HKRLQKVLKTLRYIKHVQI-----LRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            K +  ++++L    H++      L      S++      R   EL  C  +    V + 
Sbjct: 94  RKNIMHLVRSLSR--HLESGALEELTLTTNGSQL-----ARFADELADCGVK-RLNVSLD 145

Query: 211 I-------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                         E     +  I     AGI +   +V LKG N+D
Sbjct: 146 TLDPDKFKQITRWGELDR-VMGGIRAAQAAGIKIKLNAVALKGFNED 191


>gi|83590234|ref|YP_430243.1| radical SAM family protein [Moorella thermoacetica ATCC 39073]
 gi|83573148|gb|ABC19700.1| Radical SAM [Moorella thermoacetica ATCC 39073]
          Length = 441

 Score = 39.7 bits (92), Expect = 0.69,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157
             +   C  +C FCF     G  +    + +D  A L Y+Q    ++  V  TGG+PL+ 
Sbjct: 94  FFISLQCHRHCFFCFNPNQEG-YEYYTHNQRDCLAELEYLQRTGQEMKHVALTGGEPLLH 152

Query: 158 SHKRLQ 163
             + L 
Sbjct: 153 PEETLA 158


>gi|313903997|ref|ZP_07837377.1| RNA modification enzyme, MiaB family [Eubacterium cellulosolvens 6]
 gi|313471146|gb|EFR66468.1| RNA modification enzyme, MiaB family [Eubacterium cellulosolvens 6]
          Length = 487

 Score = 39.7 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 62/155 (40%), Gaps = 17/155 (10%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
             +E+ +  +++ D + +    P+      Y  +  + +++ C  +C +C    + G +K
Sbjct: 168 HPDEMVVDIQQKTDLMVEQ--LPVD---RTYKFKSGVNIMYGCNNFCSYCIVPYVRGREK 222

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-----SHKRLQKVLKTLRYIKHVQI 177
                  D    +  +     I EV+  G +         +     ++L+++  I  ++ 
Sbjct: 223 SREPL--DILREIEQLVADGVI-EVMLLGQNVNSYGKTLENPVSFAELLESVAQIDGLRR 279

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           +RF +      P+ ++ ELI  + +    +   +H
Sbjct: 280 VRFMTSH----PKDLSDELIAVMAKYPDKICPHLH 310


>gi|307565114|ref|ZP_07627622.1| translation initiation factor IF-1 [Prevotella amnii CRIS 21A-A]
 gi|307346145|gb|EFN91474.1| translation initiation factor IF-1 [Prevotella amnii CRIS 21A-A]
          Length = 72

 Score = 39.7 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ +E G +I+      ISG  +  YI  LPG   KV++  +++ K   G     
Sbjct: 22  FRVELENGVEII----AHISGKMRMHYIKILPGDKIKVEMSPYDLTK---GRIVFR 70


>gi|288802855|ref|ZP_06408292.1| 2-methylthioadenine synthetase [Prevotella melaninogenica D18]
 gi|288334672|gb|EFC73110.1| 2-methylthioadenine synthetase [Prevotella melaninogenica D18]
          Length = 449

 Score = 39.7 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C                     A      +    E++ TG  
Sbjct: 156 RTRYFLKVQDGCNYFCTYCTI-PFARGFSRNPTIQSLVAQAEE--AAREGGKEIVLTGVN 212

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ +Q  R  S    ++P  I+ ELI    E+       
Sbjct: 213 IGDFGKTTGESFLDLVKALDKVEGIQRFRISS----LEPDLIDDELIAYCAESR---AFM 265

Query: 211 IHA 213
            H 
Sbjct: 266 PHF 268


>gi|302346286|ref|YP_003814584.1| MiaB-like protein [Prevotella melaninogenica ATCC 25845]
 gi|302150387|gb|ADK96648.1| MiaB-like protein [Prevotella melaninogenica ATCC 25845]
          Length = 449

 Score = 39.7 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C                     A      +    E++ TG  
Sbjct: 156 RTRYFLKVQDGCNYFCTYCTI-PFARGFSRNPTIQSLVAQAEE--AAREGGKEIVLTGVN 212

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ +Q  R  S    ++P  I+ ELI    E+       
Sbjct: 213 IGDFGKTTGESFLDLVKALDKVEGIQRFRISS----LEPDLIDDELIAYCAESR---AFM 265

Query: 211 IHA 213
            H 
Sbjct: 266 PHF 268


>gi|296127653|ref|YP_003634905.1| biotin and thiamin synthesis associated [Brachyspira murdochii DSM
           12563]
 gi|296019469|gb|ADG72706.1| biotin and thiamin synthesis associated [Brachyspira murdochii DSM
           12563]
          Length = 474

 Score = 39.7 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 31/76 (40%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L L + C   C +C      G      L+  +  A +  +Q        + TG DP   S
Sbjct: 94  LYLSNYCINGCVYCPYHAKNGHIARKQLTQDEIRAEVTALQNMGHKRLALETGEDPDYAS 153

Query: 159 HKRLQKVLKTLRYIKH 174
            + L + +KT+  IKH
Sbjct: 154 MEYLLESIKTIYSIKH 169


>gi|73661954|ref|YP_300735.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
 gi|82592974|sp|Q49ZI6|MOAA_STAS1 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|72494469|dbj|BAE17790.1| molybdenum cofactor biosynthesis protein A [Staphylococcus
           saprophyticus subsp. saprophyticus ATCC 15305]
          Length = 340

 Score = 39.7 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           L +   C   C +C  +E+ G       K  +L+  +    +A +  +  + ++  TGG+
Sbjct: 18  LSVTDRCNFRCDYCMPKEIFGDDFVFLPKDELLTFDEMVR-IAQVYTQLGVKKIRITGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+     L K++  L  ++ V+ +
Sbjct: 77  PLLRRD--LDKLIYQLNQLEGVEDI 99


>gi|302542868|ref|ZP_07295210.1| radical SAM [Streptomyces hygroscopicus ATCC 53653]
 gi|302460486|gb|EFL23579.1| radical SAM [Streptomyces himastatinicus ATCC 53653]
          Length = 321

 Score = 39.7 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 32/187 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P    L++   C + CR C+         G  +S  D    +  +     + +V F GG+
Sbjct: 8   PQFAWLEITGFCNLNCRHCYANSSSQGDHG-DMSDADWIRVIDQL-NGLGVRDVQFIGGE 65

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIA-- 210
           P       L + L       H    ++  R+ +      I PE+ + L   G  +  +  
Sbjct: 66  P------TLHQSLPAFIRHAH----KYAMRIEVFSNMTHIRPEVWEALTLPGVRLAFSYY 115

Query: 211 --IHANHPYEFSEE------AIAAISRLANAGIILLSQSVL--LKGINDDPEILANLMRT 260
                +H  E +E         A + +    GI +   SV+  L+G     +  AN    
Sbjct: 116 SDNETDH-DEVTEVRGSHARTRANVEKARELGIKMRG-SVIHVLEG-----QREANAHHE 168

Query: 261 FVELRIK 267
            ++L I+
Sbjct: 169 LLQLGIR 175


>gi|83719624|ref|YP_441148.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           thailandensis E264]
 gi|167617973|ref|ZP_02386604.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
           thailandensis Bt4]
 gi|257140190|ref|ZP_05588452.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
           thailandensis E264]
 gi|123537978|sp|Q2T101|MIAB_BURTA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|83653449|gb|ABC37512.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
           thailandensis E264]
          Length = 457

 Score = 39.7 bits (92), Expect = 0.70,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 26/138 (18%)

Query: 91  HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
           H  P R+      + ++  C  YC +C     V         S+  +  L  I       
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQG 192

Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           + EV   G +       L      +     +++ +  I  ++ +R+ +      P+    
Sbjct: 193 VREVTLLGQNVNAYRGALTAGAHEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248

Query: 195 ELIQCLKEAGKPVYIAIH 212
            L+    +  K +   +H
Sbjct: 249 RLLDVYAKVPK-LVDHLH 265


>gi|296133089|ref|YP_003640336.1| protein of unknown function DUF512 [Thermincola sp. JR]
 gi|296031667|gb|ADG82435.1| protein of unknown function DUF512 [Thermincola potens JR]
          Length = 445

 Score = 39.7 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 41/214 (19%), Positives = 75/214 (35%), Gaps = 47/214 (21%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +      +  C   C FCF  +M    + ++    D      Y     Q   V  T    
Sbjct: 80  ETATFDGITSCQNRCVFCFVDQMPAGMRKSLYIKDD-----DYRLSFLQGNFVTLT---- 130

Query: 155 LILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
             L+ + +Q+++   L  +     +  H+  P           ++ L+            
Sbjct: 131 -NLTAEAMQRIINMRLSPL----YISVHTTNP--------DLRVKMLRNKK--------- 168

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRIK 267
                 +   +  + +LA+AGI + +Q VL  GIND  E+      L  L      + I 
Sbjct: 169 ------AARVMEQLQQLADAGIEMHTQIVLCPGINDGAELDRTLDDLTGLWPAVQSVAIV 222

Query: 268 PYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEK 300
           P  L      AG +  R +T EE + ++  +  +
Sbjct: 223 PVGLTGHR--AGLTELRTVTPEEARDLINRINSR 254


>gi|295399226|ref|ZP_06809208.1| RNA modification enzyme, MiaB family [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294978692|gb|EFG54288.1| RNA modification enzyme, MiaB family [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 451

 Score = 39.7 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     ++ S+D +  +   Q+   +   E++ T 
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEIIRQAQQLVNAGYKEIVLTG 196

Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   +       +L+ L   +  ++ LR  S    ++  +I  E+I  L+ +
Sbjct: 197 IHTGGYGTD---MKDYNFAALLRDLDEQVVGLKRLRISS----IEASQITDEVIDVLRRS 249

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 250 DK-IVRHLHI 258


>gi|312110172|ref|YP_003988488.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y4.1MC1]
 gi|311215273|gb|ADP73877.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y4.1MC1]
          Length = 451

 Score = 39.7 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     ++ S+D +  +   Q+   +   E++ T 
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEIIRQAQQLVNAGYKEIVLTG 196

Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   +       +L+ L   +  ++ LR  S    ++  +I  E+I  L+ +
Sbjct: 197 IHTGGYGTD---MKDYNFAALLRDLDEQVVGLKRLRISS----IEASQITDEVIDVLRRS 249

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 250 DK-IVRHLHI 258


>gi|167579900|ref|ZP_02372774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia
           thailandensis TXDOH]
          Length = 457

 Score = 39.7 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 26/138 (18%)

Query: 91  HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
           H  P R+      + ++  C  YC +C     V         S+  +  L  I       
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQG 192

Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           + EV   G +       L      +     +++ +  I  ++ +R+ +      P+    
Sbjct: 193 VREVTLLGQNVNAYRGALTAGAHEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248

Query: 195 ELIQCLKEAGKPVYIAIH 212
            L+    +  K +   +H
Sbjct: 249 RLLDVYAKVPK-LVDHLH 265


>gi|114797605|ref|YP_760268.1| molybdenum cofactor biosynthesis protein A [Hyphomonas neptunium
           ATCC 15444]
 gi|114737779|gb|ABI75904.1| molybdenum cofactor biosynthesis protein MoaA [Hyphomonas neptunium
           ATCC 15444]
          Length = 330

 Score = 39.7 bits (92), Expect = 0.71,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 32/179 (17%)

Query: 99  LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           L +  VC   C +C        GS     L++ + E  +        I +V  TGG+P +
Sbjct: 21  LSVTEVCNFRCTYCLPDGYRKTGSMD--FLAADEIERLVRAFTG-LGIRKVRLTGGEPTV 77

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
                L +++  +     V+ +   +      P+RI+  +   L      +         
Sbjct: 78  RKD--LTQLIARISATPGVEKVALTTNGWN-LPRRIDEWVGAGLTNLNVSI--------- 125

Query: 217 YEFSEEAIAAI---SRLAN--AGI---------ILLSQSVLLK-GINDDPEILANLMRT 260
                EA   I    RLA+  AG+          +   +VLL+ G+ +D       +R 
Sbjct: 126 DSLDREAFHRITGHDRLADVLAGLECALALPLKTVKVNAVLLRDGLEEDFSSWTEFVRE 184


>gi|298291280|ref|YP_003693219.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM
           506]
 gi|296927791|gb|ADH88600.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM
           506]
          Length = 348

 Score = 39.7 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 23/165 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +    +  + ++  TGG+PL+  
Sbjct: 33  VSVTDRCDFRCVYCMAEHMTFLPKPELLTLEELDRLCSAFVAR-GVRKLRLTGGEPLVRR 91

Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
                 + L + L +   ++ + +    S++      R   EL  C     K + +++  
Sbjct: 92  DVMTLFRSLSRHLDS-GALEELTLTTNGSQL-----ARFASELADC---GVKRINVSLDT 142

Query: 214 NHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
             P  F             A I     AGI +   +V L+G N+D
Sbjct: 143 LDPQRFRALTRWGDLNKVLAGIDAAQEAGIHVKLNAVALRGENED 187


>gi|322420929|ref|YP_004200152.1| hopanoid biosynthesis associated radical SAM protein HpnH
           [Geobacter sp. M18]
 gi|320127316|gb|ADW14876.1| hopanoid biosynthesis associated radical SAM protein HpnH
           [Geobacter sp. M18]
          Length = 332

 Score = 39.7 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 29/188 (15%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             +YP  ++L+  H+C + C  C R         T+      +  L  + E      V  
Sbjct: 23  QEKYPLVLMLEPTHLCNLACSGCGRIR---EYADTIQEMMTLQECLNSVDECPAP-VVTI 78

Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           TGG+P +     + +++   L+  KH+      +   +++        +  LK       
Sbjct: 79  TGGEPFLYP--HIFELIDAVLKRGKHIY---LCTNALLLEKA------LDTLKPHP-NFV 126

Query: 209 IAIHA-----NHPY--EFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEILANLM 258
           + +H       H    E       A+S +  A   G  L + + + K  N     +  L 
Sbjct: 127 LNVHLDGMEETHDRILERPGTFKIAMSAIKKAKALGFRLCTNTTIFKETN--LIEIEMLF 184

Query: 259 RTFVELRI 266
               ++ +
Sbjct: 185 SHLRDIGV 192


>gi|229118218|ref|ZP_04247576.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock1-3]
 gi|228665265|gb|EEL20749.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus
           Rock1-3]
          Length = 339

 Score = 39.7 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G          +L+  + E           + ++  TGG+
Sbjct: 20  ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           PL+     L K++  L  I  +  +   +         +  +  + LKEAG         
Sbjct: 79  PLLRKD--LTKLIACLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130

Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   + N     ++  I  I     AG+ +    V+ KG+ND 
Sbjct: 131 AIDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177


>gi|255658493|ref|ZP_05403902.1| molybdenum cofactor biosynthesis protein A [Mitsuokella multacida
           DSM 20544]
 gi|260849292|gb|EEX69299.1| molybdenum cofactor biosynthesis protein A [Mitsuokella multacida
           DSM 20544]
          Length = 329

 Score = 39.7 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 40/89 (44%), Gaps = 4/89 (4%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            R  + + + L   C + CR+C   E V   +   +L   +    +  +     + +V  
Sbjct: 6   QRKIEYVRISLTDRCNLRCRYCMPEEGVEKLRHEDILRFDEIVRIVRALAS-LGVRKVRL 64

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           TGG+PLI   + + ++++ +  +  ++ +
Sbjct: 65  TGGEPLI--RRNIVELVREIHAVPGIETI 91


>gi|207725239|ref|YP_002255635.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
           MolK2]
 gi|206590473|emb|CAQ37435.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum
           MolK2]
          Length = 391

 Score = 39.7 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 7/77 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +++            +LS ++ E  +    E   + ++  TGG+
Sbjct: 66  ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 124

Query: 154 PLILSH-KRLQKVLKTL 169
           PL+    +RL ++L  L
Sbjct: 125 PLLRKDIERLVEMLARL 141


>gi|94264027|ref|ZP_01287827.1| Radical SAM [delta proteobacterium MLMS-1]
 gi|93455538|gb|EAT05725.1| Radical SAM [delta proteobacterium MLMS-1]
          Length = 351

 Score = 39.7 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 65/216 (30%), Gaps = 35/216 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  +  ++   C + C  C     + ++        + +  L  I   +Q   V+ +GG+
Sbjct: 5   PKWLAWEITRRCNLNCVHCRSSSELEAKGHPDFDFTEAKRILDDITSYAQP-VVVLSGGE 63

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210
           PL L           +      + LR        +   +  E+ + LKE G  +      
Sbjct: 64  PL-LRDDVFD-----IAAYGTEKGLRMC---LATNGTLVTDEVCRRLKEVGIRMVSMSLD 114

Query: 211 -----IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
                +H N    P  F    I A        I  L  S   K    D   +  L +   
Sbjct: 115 GADAAVHDNFRSQPGAFDG-TINATRLFREHDIPFLFNSSFTKRNQADIPRVYRLAKEL- 172

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
                 +Y+             +    G+ I++ L 
Sbjct: 173 --GATAWYMFM----------IVPTGRGEDILSELI 196


>gi|330685605|gb|EGG97251.1| YfkB-like domain protein [Staphylococcus epidermidis VCU121]
          Length = 380

 Score = 39.7 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 16/135 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
               ++C + C  C     + ++    L        L  I     +  +  TGG+P + S
Sbjct: 35  FTTTNLCNMRCSHCAVGYTLQTKDPEPLPMDIIYRRLDEI---PNLRTLSITGGEP-MFS 90

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215
            K ++ V+K L    H + +       +  PQ    ++ + +          +H +H   
Sbjct: 91  KKSIKNVVKPLLKYAHQRGIYVQMNSNLTLPQDRYLDIAEYID--------VMHISHNWG 142

Query: 216 -PYEFSEEAIAAISR 229
              EF++    A+ +
Sbjct: 143 TIQEFTDVGFGAMKK 157


>gi|319650009|ref|ZP_08004158.1| coenzyme PQQ synthesis protein PqqE [Bacillus sp. 2_A_57_CT2]
 gi|317398190|gb|EFV78879.1| coenzyme PQQ synthesis protein PqqE [Bacillus sp. 2_A_57_CT2]
          Length = 375

 Score = 39.7 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 65/180 (36%), Gaps = 24/180 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ +L   C + C  C R E    +    LS  + +  +  I+E +    ++FTGGD
Sbjct: 11  PFIVIWELTRACQLKCLHC-RAEAQYRRDPRELSFDEGKYLIDQIKEMNNPM-LVFTGGD 68

Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
           PL+      + +           + +R  S  P   P  +  E I+  KE G   +    
Sbjct: 69  PLMRQDVFDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIEKAKEVGLARWAFSL 119

Query: 209 ------IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
                 I  H       F    I  I  L    I +   +V+ +   D  E +A ++   
Sbjct: 120 DGPKAEIHDHFRGTAGSFD-LTIERIKYLHELEIPVQINTVISRYNIDYLEEMAKVVEEL 178


>gi|292491535|ref|YP_003526974.1| molybdenum cofactor biosynthesis protein A [Nitrosococcus
           halophilus Nc4]
 gi|291580130|gb|ADE14587.1| molybdenum cofactor biosynthesis protein A [Nitrosococcus
           halophilus Nc4]
          Length = 335

 Score = 39.7 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 8/89 (8%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G +     +  +L+ ++    +  I     + +V  TGG+
Sbjct: 16  VSVTDRCNFRCPYCMPKEIYGRKWAFLPRNELLTFEEISRLVR-IFVTLGVEKVRLTGGE 74

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           PL+     L+++++ L  I+ +Q L   +
Sbjct: 75  PLLRQD--LEQLVRMLASIEALQDLTLTT 101


>gi|302873840|ref|YP_003842473.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307689915|ref|ZP_07632361.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302576697|gb|ADL50709.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
          Length = 467

 Score = 39.7 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 70/182 (38%), Gaps = 43/182 (23%)

Query: 82  NHSPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
            ++P+     RY  P+ ++L L +VC   C +C      GS+    LS  D    +    
Sbjct: 122 QYNPV-----RYESPEELVLSLSYVCNHKCIYCCNS--SGSRIEDELSFNDWIKVIDE-A 173

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR------VPIVDPQRIN 193
               +  ++F+GG+PL+              +IK V+     ++      +   +   I+
Sbjct: 174 ADLGVETILFSGGEPLMYPD-----------FIKLVKR----TKDNGIYPIVSTNGTLIS 218

Query: 194 PELIQCLKEAGKPVYIAIHANHPYE------FS-----EEAIAAISRLANAGIILLSQSV 242
            E  + L EAG   ++ +  +   E              +  AAI  L +  I +  + V
Sbjct: 219 EETAKQLSEAGID-FVHLSMSAANEELYDSIIGYKGNLPKVKAAIKALKDNNIYIRLKVV 277

Query: 243 LL 244
           L+
Sbjct: 278 LM 279


>gi|148262099|ref|YP_001228805.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146395599|gb|ABQ24232.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 357

 Score = 39.7 bits (92), Expect = 0.72,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 75/221 (33%), Gaps = 42/221 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           P  I  +    C + C  C    EM  S+     ++++ +  L  I + S+   V+ +GG
Sbjct: 7   PKWIAWETTQKCNLKCVHCRCSSEMTSSEGD--FTTEEGKKLLKEIADFSKP-VVVLSGG 63

Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVY-- 208
           +PL+      L     +L             R+    +   +  E+ + +KEA   +   
Sbjct: 64  EPLMRKDIFELAGYGTSL-----------GLRMCMASNGALVTDEVCEKMKEADIKMVSL 112

Query: 209 ------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
                  A+H N    P  F     AA       G   L  S   K    +   +AN  +
Sbjct: 113 SLDGSTAAVHDNFRQCPGSFDGVVRAA-ELFRKHGQKFLINSSFTK---RNQADIANTFK 168

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
               L    +Y+             +    G++I++ L  K
Sbjct: 169 VAKSLGATAWYMFM----------IVPTGRGEEIMSELISK 199


>gi|225850334|ref|YP_002730568.1| molybdenum cofactor biosynthesis protein A [Persephonella marina
           EX-H1]
 gi|225645594|gb|ACO03780.1| molybdenum cofactor biosynthesis protein A [Persephonella marina
           EX-H1]
          Length = 321

 Score = 39.7 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 46/109 (42%), Gaps = 13/109 (11%)

Query: 99  LKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + +   C + C +C     E V      +L  ++    +  + +   + +V  TGG+PL+
Sbjct: 8   VSVTDKCNLKCFYCRPDNSEFV--PHDEILRYEEIARLVKAMTKY-GLRKVRITGGEPLV 64

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               +L++++K L+ I  +  +   +            +  + L++AG 
Sbjct: 65  --RPQLEELVKMLKDIPQINDISLTTNAIT------LSKHAEKLRKAGL 105


>gi|154706007|ref|YP_001424838.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella
           burnetii Dugway 5J108-111]
 gi|229890504|sp|A9KCP2|MIAB_COXBN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|154355293|gb|ABS76755.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii Dugway
           5J108-111]
          Length = 439

 Score = 39.7 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 19/125 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD- 153
             + ++  C  YC FC     V         S+  +  +A +    +  + E+   G + 
Sbjct: 148 AFVSIMEGCSKYCTFC-----VVPYTRGEEISRPFDDVIAEVASLCEQGVREITLLGQNV 202

Query: 154 ---PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                ++   +   L  ++  L  + +++ +RF +  P       +  LI    E  K +
Sbjct: 203 NDYCGLMHDGQVADLALLIHYLAAMDNIERIRFTTSHPSA----FSENLIDAYAEEPK-L 257

Query: 208 YIAIH 212
              +H
Sbjct: 258 ANHLH 262


>gi|154501155|ref|ZP_02039193.1| hypothetical protein BACCAP_04845 [Bacteroides capillosus ATCC
           29799]
 gi|150269847|gb|EDM97382.1| hypothetical protein BACCAP_04845 [Bacteroides capillosus ATCC
           29799]
          Length = 434

 Score = 39.7 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 24/160 (15%)

Query: 64  KEELNILPEEREDPIGDN---NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           + E  ++PE   D I  +      P  G+  R   R +LK+   C  +C +C      G 
Sbjct: 115 RAEAELVPEMLVDNIMTHRSFEQLPAGGLEGR--TRAMLKVEDGCVNFCTYCIIPYARGP 172

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR-------LQKVLKTLRYIK 173
            +   LS    E A   + +     E++ TG +  I S          L  +++ + +  
Sbjct: 173 VRSLALS-AAVEQAKK-LAQD-GYREIVLTGIE--ISSWGHEFKDGTSLIDLVEGICHAV 227

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
               +R  S    ++P+ I  +  +          +  H 
Sbjct: 228 PDLRVRLGS----LEPRTITEDFCRRAAALPN---LCPHF 260


>gi|152974529|ref|YP_001374046.1| coproporphyrinogen III oxidase [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152023281|gb|ABS21051.1| Coproporphyrinogen dehydrogenase [Bacillus cytotoxicus NVH 391-98]
          Length = 495

 Score = 39.7 bits (92), Expect = 0.73,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 65/155 (41%), Gaps = 15/155 (9%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDTEAALAY 137
           S +  +     +  +   +  CP  C +C F    +  ++G+V S       +     A+
Sbjct: 159 SVIPDLYRLKEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEIREIGAF 218

Query: 138 IQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPE 195
           ++EK  ++  + + GG P  ++ + +  + + +     +V+ +R  + V    P  I PE
Sbjct: 219 LKEKGIKVTTIYYGGGTPTSITAEEMDMLYEQMYESFPNVENVREVT-VEAGRPDTITPE 277

Query: 196 LIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
            ++ L +     + I      P  + +E + AI R
Sbjct: 278 KLEVLNKWNIDRISIN-----PQSYHQETLKAIGR 307


>gi|304373805|ref|YP_003858550.1| NrdG anaerobic nucleotide reductase subunit [Enterobacteria phage
           RB16]
 gi|299829761|gb|ADJ55554.1| NrdG anaerobic nucleotide reductase subunit [Enterobacteria phage
           RB16]
          Length = 163

 Score = 39.7 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 3/77 (3%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R++L +   C   C  C+ R     + GT  + ++TE  L  +     +  +  TGGDP 
Sbjct: 18  RVVLFVTG-CNHKCEGCYNRSTWNPRNGTPYT-EETENELIKLLSNPHVDGLTLTGGDPF 75

Query: 156 ILSHK-RLQKVLKTLRY 171
             ++  +L K+L+ +R 
Sbjct: 76  YRTNHPKLLKLLQRVRA 92


>gi|205351955|ref|YP_002225756.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Gallinarum str. 287/91]
 gi|207856135|ref|YP_002242786.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella
           enterica subsp. enterica serovar Enteritidis str.
           P125109]
 gi|229890644|sp|B5QWC1|MIAB_SALEP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890645|sp|B5R817|MIAB_SALG2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|205271736|emb|CAR36570.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206707938|emb|CAR32227.1| MiaB protein (putative tRNA-thiotransferase (or
           tRNA-methylthiotransferase)) [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326626994|gb|EGE33337.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB
           [Salmonella enterica subsp. enterica serovar Gallinarum
           str. 9]
          Length = 474

 Score = 39.7 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 63/186 (33%), Gaps = 33/186 (17%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
              + ++  C  YC +C      G +      S D    +A +  +  + EV   G +  
Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAAQ-GVREVNLLGQNVN 204

Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLK- 201
                    +      +L+ +  I  +  +RF +  P      I++  R  PEL+  L  
Sbjct: 205 AWRGENYDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 202 --EAGKPVYIA----IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI----NDDP 251
             ++G    +      H       + E  A I +L  A   +   S  + G     NDD 
Sbjct: 265 PVQSGSDRVLNLMGRTHT------ALEYKAIIRKLRAARPDIQISSDFIVGFPGETNDDF 318

Query: 252 EILANL 257
           E    L
Sbjct: 319 EKTMKL 324


>gi|150002891|ref|YP_001297635.1| involved moaA/nifB/pqqE family protein, involved in molybdenum
           cofactor biosynthesis [Bacteroides vulgatus ATCC 8482]
 gi|319642417|ref|ZP_07997069.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 3_1_40A]
 gi|149931315|gb|ABR38013.1| involved moaA/nifB/pqqE family protein, involved in molybdenum
           cofactor biosynthesis [Bacteroides vulgatus ATCC 8482]
 gi|317385947|gb|EFV66874.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 3_1_40A]
          Length = 498

 Score = 39.7 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 39/192 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
             L + C  +C++C            + S   T+  +  I+E    Q+ +V   GG+  +
Sbjct: 146 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 200

Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212
               ++  +LK L  R I         +++P+        +L+Q ++E G    V I++ 
Sbjct: 201 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 249

Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261
           A H    +           E +  +  L ++G+     SVL    N    +LA L+    
Sbjct: 250 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQVNVLAELLHELS 308

Query: 262 -----VELRIKP 268
                 + RI P
Sbjct: 309 HLKHIRDWRIIP 320


>gi|212712166|ref|ZP_03320294.1| hypothetical protein PROVALCAL_03248 [Providencia alcalifaciens DSM
           30120]
 gi|212685213|gb|EEB44741.1| hypothetical protein PROVALCAL_03248 [Providencia alcalifaciens DSM
           30120]
          Length = 326

 Score = 39.7 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 59/162 (36%), Gaps = 21/162 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  VC   C +C       S +   L+  +         E     +V  TGG+P +  
Sbjct: 17  LSITDVCNFRCTYCLPDGYKPSGRHEFLTLDEIRRVSRAFAE-LGTEKVRITGGEPTMRK 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
                 ++  ++    ++ +         +  R+  ++    ++AG    + +  +   P
Sbjct: 76  D--FTDIIAAIKENDSIKKI-----AVTTNGYRMARDVQAW-RDAGLN-AVNVSVDSLDP 126

Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGIND 249
            +F+         + +  I    +AG   +   +VL+K +ND
Sbjct: 127 RQFAAITGQDKFFQVMKGIDAAFDAGFDKVKVNAVLMKNVND 168


>gi|186680946|ref|YP_001864142.1| nitrogenase cofactor biosynthesis protein NifB [Nostoc punctiforme
           PCC 73102]
 gi|186463398|gb|ACC79199.1| nitrogenase cofactor biosynthesis protein NifB [Nostoc punctiforme
           PCC 73102]
          Length = 483

 Score = 39.7 bits (92), Expect = 0.74,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 71/222 (31%), Gaps = 61/222 (27%)

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MV 118
           E +   P   ED              H Y  R+ + +   C + C +C R+         
Sbjct: 43  ERIAKHPCYSEDA------------HHHYA-RMHVAVAPACNIQCNYCNRKYDCANESRP 89

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHK----------------- 160
           G     +   +    AL    +  Q+  V   G GDPL    K                 
Sbjct: 90  GVVSELLTPEEAAHKALVIGGKIPQMTVVGIAGPGDPLANPEKTFRTFELIAAQAPDIKL 149

Query: 161 -------RLQKVLKTLRY--IKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVY 208
                   L   +  ++   I HV  +  +    +VDP+   +I P  +   ++  + + 
Sbjct: 150 CLSTNGLMLPDYIDRIKQLNIDHV-TITIN----MVDPEIGAKIYP-WVHYRRKRYRGLE 203

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                 H  +        +  L +A I+    SV++ GIND 
Sbjct: 204 -GAKILHERQM-----EGLQALKDADILCKVNSVMIPGINDH 239


>gi|307331899|ref|ZP_07610996.1| Radical SAM domain protein [Streptomyces violaceusniger Tu 4113]
 gi|306882464|gb|EFN13553.1| Radical SAM domain protein [Streptomyces violaceusniger Tu 4113]
          Length = 386

 Score = 39.7 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 12/125 (9%)

Query: 96  RILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-----EV 147
             +LK+ + C + C +C+    ++         +S +   A    I E +         V
Sbjct: 12  TFILKVANRCNIDCDYCYVFNSKDQSSRHLPARMSLEVARATAQRIGEHAAANGMREVHV 71

Query: 148 IFTGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           +  GG+PL+   + +  +L T L  I     +RF  +        +    +   +  G  
Sbjct: 72  VLHGGEPLLAGPQHMAGLLSTVLEAIPPTTDVRFELQTNGTL---LTEAWLNLFERYGVA 128

Query: 207 VYIAI 211
           V I++
Sbjct: 129 VGISL 133


>gi|298373288|ref|ZP_06983277.1| translation initiation factor IF-1 [Bacteroidetes oral taxon 274
           str. F0058]
 gi|298274340|gb|EFI15892.1| translation initiation factor IF-1 [Bacteroidetes oral taxon 274
           str. F0058]
          Length = 72

 Score = 39.7 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ ++ G +I+      ISG  +  YI  LPG   KV++  +++ K   G     
Sbjct: 22  FRVQLQNGHEII----AHISGKMRMHYIRILPGDKVKVEMSPYDLSK---GRISFR 70


>gi|257066928|ref|YP_003153184.1| molybdenum cofactor biosynthesis protein A [Anaerococcus prevotii
           DSM 20548]
 gi|256798808|gb|ACV29463.1| molybdenum cofactor biosynthesis protein A [Anaerococcus prevotii
           DSM 20548]
          Length = 312

 Score = 39.7 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 35/169 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAY--IQEKSQIWEVIFTGGD 153
           + +   C   C++C      G     +L  +D    E  +    I     I ++  TGG+
Sbjct: 14  ISVTDRCNFRCKYCM-----GEDGIKLLRHEDILTFEEIVETAQIMAGLGIRKIRLTGGE 68

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------- 204
           P   + + +  ++K L  I  ++ L   +   +V       + ++ LKE G         
Sbjct: 69  PF--ARRGVMDLIKKLSQIPEIEDLAITTNGSMVY------DKLESLKEYGISRINFSLD 120

Query: 205 ----KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
               +   +   A+   E       AI       + +    VL+KG ND
Sbjct: 121 TLDREKFKLITGADLLEEVKRTIFKAIELDFKVKVNI----VLIKGFND 165


>gi|255322795|ref|ZP_05363937.1| radical SAM domain protein [Campylobacter showae RM3277]
 gi|255300137|gb|EET79412.1| radical SAM domain protein [Campylobacter showae RM3277]
          Length = 275

 Score = 39.7 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 36/184 (19%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQE----KSQIWEVI 148
            R+ L +   C + C FC R     ++    ++ +    + A  Y++     +  I  + 
Sbjct: 24  GRVHLPVAPNCNIQCNFCNRIYDCANENRPGVTGRVQSPDEAALYVENLFKFRQDISVIG 83

Query: 149 FTG-GDPLILSHKRLQKV---------------LKTLRYIKHV-QILRFHSRVPIVDPQR 191
             G GDP+  + K L                     L   +HV  I+R       V    
Sbjct: 84  IAGPGDPMCDADKTLATFEKCKARFPHALLCLSTNGLSLPEHVDDIVRIGVSHVTVTVNA 143

Query: 192 INPELIQCLKEAGKPVYIAIHANH-------PYEFSEEAIAAISRLANAGIILLSQSVLL 244
           + P++       GK      H N             E     I +L  A +I+   +V++
Sbjct: 144 VTPDV------GGKIYAWVRHKNKIYRGEDGARILGERQEEGIRKLKEARMIVKINTVVI 197

Query: 245 KGIN 248
            G+N
Sbjct: 198 PGVN 201


>gi|239813975|ref|YP_002942885.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Variovorax
           paradoxus S110]
 gi|239800552|gb|ACS17619.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Variovorax paradoxus
           S110]
          Length = 454

 Score = 39.7 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 24/129 (18%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151
              + ++  C  YC +C     V         ++  +  L  I       + EV   G  
Sbjct: 146 TAFVSIMEGCSKYCSYC-----VVPYTRGEEVNRPLDDVLVEIAGLADQGVREVTLLGQN 200

Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                   GD   ++   L  +++ +  I  ++ +R+ +      P    P LI+   + 
Sbjct: 201 VNAYRGRMGDTAEIADFAL--LIEYVAEIPGIERIRYTTSH----PNEFTPRLIEAYAKV 254

Query: 204 GKPVYIAIH 212
              +   +H
Sbjct: 255 P-QLVSHLH 262


>gi|152976740|ref|YP_001376257.1| RNA modification protein [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025492|gb|ABS23262.1| RNA modification enzyme, MiaB family [Bacillus cytotoxicus NVH
           391-98]
          Length = 450

 Score = 39.7 bits (92), Expect = 0.75,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 19/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C FC      G  + +    +  + A   +       E++ T   
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDGKEVIKQAQQLVDA--GYKEIVLTGIH 198

Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D   +    L  +L+ +   +K ++ LR  S    ++  +I+ E+I+ L ++ K
Sbjct: 199 TGGYGED---MKDYNLAGLLRDMEAEVKGLKRLRISS----IEASQISDEVIEVLDKS-K 250

Query: 206 PVYIAIHA 213
            V   +H 
Sbjct: 251 VVVRHLHI 258


>gi|294674416|ref|YP_003575032.1| Fe-S oxidoreductase [Prevotella ruminicola 23]
 gi|294471976|gb|ADE81365.1| putative Fe-S oxidoreductase [Prevotella ruminicola 23]
          Length = 445

 Score = 39.7 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 3/61 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + L + C + C  CF R   G      L   +    L    +      V F+GG+PL+  
Sbjct: 107 IYLTNACNLRCEHCFMR--SGKPLDNELPKTEWLRILTEF-QHQGGKSVTFSGGEPLMNR 163

Query: 159 H 159
            
Sbjct: 164 D 164


>gi|239977822|ref|ZP_04700346.1| hypothetical protein SalbJ_00205 [Streptomyces albus J1074]
 gi|291449746|ref|ZP_06589136.1| predicted protein [Streptomyces albus J1074]
 gi|291352695|gb|EFE79597.1| predicted protein [Streptomyces albus J1074]
          Length = 365

 Score = 39.7 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 19/148 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L+ L   CP+ C  C      G       +  D    +A    + +   ++ TGG+PL+
Sbjct: 17  VLVTLTRRCPLSCAHCSTG--SGPDTDERPAPGDLRRLVASFTPRDRPDVMMLTGGEPLL 74

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-- 214
           +       +++ L      +     +R   V             +   +      H +  
Sbjct: 75  MP-----GLVRELALSAKEK----GTRT-AVLSGMFFARARSVPRAVLRAAEAVDHFSAS 124

Query: 215 ----HPYEF-SEEAIAAISRLANAGIIL 237
               H  E       AA+  L+  G  +
Sbjct: 125 LDLHHEREVPRAAVFAALRALSTTGTRV 152


>gi|167747917|ref|ZP_02420044.1| hypothetical protein ANACAC_02647 [Anaerostipes caccae DSM 14662]
 gi|167652648|gb|EDR96777.1| hypothetical protein ANACAC_02647 [Anaerostipes caccae DSM 14662]
          Length = 312

 Score = 39.7 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 22/182 (12%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVY-CRFC-FRREMVGSQKGTVL 126
           E + +   +      +G+V+R P      ++++   C    C FC   +E     +    
Sbjct: 12  ENKTESYQEERQMEYEGMVYRPPSEAYSLIIQVTIGCSQNDCIFCNMYKEKRFRMRPLQD 71

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILR-FHSRV 184
              D   A  Y    + I ++    GD LI  ++ L ++LK +R  I   + +  + S  
Sbjct: 72  VLADFREAREY---YNSIGKIFLADGDALICKNEYLNEILKYIREEIPECRQVTCYASPK 128

Query: 185 PIVDPQRINPELIQCLKEAGKP-VYIAIHANHPYEF-------SE-EAIAAISRLANAGI 235
            ++       E ++ L+E G   VY+ + + +           +  E I + S++  AGI
Sbjct: 129 SVMIK---TKEELRELRENGLDMVYMGLESGNAQVLKFMKKGATPDEMIQSASKIKQAGI 185

Query: 236 IL 237
            L
Sbjct: 186 RL 187


>gi|45658385|ref|YP_002471.1| hypothetical protein LIC12543 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|81567903|sp|Q72PC8|RIMO_LEPIC RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|45601628|gb|AAS71108.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 437

 Score = 39.7 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 25/158 (15%)

Query: 56  IARQFIPQKEELNILPEEREDPIGD--NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
           I R+  P   EL+    E  D + +     S ++     Y     +K+   C   C FC 
Sbjct: 112 ILREKFP---ELSPSQLEFNDSLLERWKLSSKIENYSKPY---AYVKVSDGCNRGCSFCI 165

Query: 114 RREMVGSQKGTVLSS--KDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKVLK 167
                G    + L    +DT  A+       +I     + ++ G D      + L  +++
Sbjct: 166 IPSFRGKFAESPLDDILRDTNRAIR--AGAKEICLVSQDTVYYGRDS-----EILLDMVR 218

Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            +  I  ++ILR       + P +   +LI+ + E  K
Sbjct: 219 KVAEIDSLEILRL----LYLYPDKKTEKLIRLMGETSK 252


>gi|329961551|ref|ZP_08299632.1| radical SAM domain protein [Bacteroides fluxus YIT 12057]
 gi|328531763|gb|EGF58592.1| radical SAM domain protein [Bacteroides fluxus YIT 12057]
          Length = 458

 Score = 39.7 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 44/233 (18%), Positives = 85/233 (36%), Gaps = 40/233 (17%)

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---K 141
           P      +  D + L + H C + C++CF   +    + +V+S      A+AY+ E    
Sbjct: 72  PSACCEKQKQDMLTLNVTHGCNMSCKYCFASTL--QDRKSVMSLSVVRKAIAYMLEGNPD 129

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINP 194
           S+ + + F GG+PL+      ++ ++ +  I   +I+   SR       +   +   I+ 
Sbjct: 130 SERYTIYFFGGEPLLH-----KQFVRDVVEIAKEEII---SRRNKDVCFLLNTNGTLIDD 181

Query: 195 ELIQCLKEAGKPVYIAI----HANHPYEF-------SEEAIAAISRLANAGIILLSQSVL 243
           +++    +    V ++I      N                +  I RL   G+   +   L
Sbjct: 182 DMMNFFVQEKFTVTVSIDGPQKMNDANRVFLNGRGSFRRIVENIERLKKRGVN-FN---L 237

Query: 244 LKGINDDPEILANLMRTFVELRIKPY-YLHHPD---LAAGTSHFRLTIEEGQK 292
              I+     L    R F  + + PY Y    D       T+HF     +   
Sbjct: 238 RATISPKNTRLLETFRFFESMEV-PYSYAFTIDSDVKDRSTTHFDTNGIKAID 289


>gi|313499923|gb|ADR61289.1| Molybdenum cofactor synthesis domain-containing protein
           [Pseudomonas putida BIRD-1]
          Length = 322

 Score = 39.7 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C +C    + +V +Q    LS+      +AY+ E + I  +  TGG+PL+
Sbjct: 15  VSLTAACNYACTYCVPDGKRLVAAQDE--LSADALARGVAYLIEAAGIERLRITGGEPLV 72

Query: 157 LSHKRLQKVLKTLRYIK 173
               RL   L  +  + 
Sbjct: 73  SP--RLDAFLAAVAKLD 87


>gi|282163323|ref|YP_003355708.1| probable molybdenum cofactor biosynthesis protein A [Methanocella
           paludicola SANAE]
 gi|282155637|dbj|BAI60725.1| probable molybdenum cofactor biosynthesis protein A [Methanocella
           paludicola SANAE]
          Length = 312

 Score = 39.7 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 30/179 (16%)

Query: 87  KGIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKS 142
           + +V  Y  R+    + L + C + C +C      G    G  ++  +    +  I  K 
Sbjct: 3   ESLVDNYGRRVTSLRMSLTNRCNLQCIYC---HNEGESGSGGEITVDEIARLVR-IATKY 58

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            +  V F+GG+PL+ +   L+ +L+ L     ++ +   +   ++ P+       + LKE
Sbjct: 59  GVDRVKFSGGEPLLRTD--LEDILRAL---PPLKDISLTTNGTLLAPR------AKGLKE 107

Query: 203 AGK-PVYIAIHANHPYEFSEEAIAA---------ISRLANAGI-ILLSQSVLLKGINDD 250
           AG   V I++       F                I+   +AG+  +    V LKGIN+D
Sbjct: 108 AGLDRVNISLDTMDSGRFDLITQRKGQFSRVMDGINAAIDAGLTPVKLNMVYLKGINED 166


>gi|237748413|ref|ZP_04578893.1| molybdenum cofactor biosynthesis protein A [Oxalobacter formigenes
           OXCC13]
 gi|229379775|gb|EEO29866.1| molybdenum cofactor biosynthesis protein A [Oxalobacter formigenes
           OXCC13]
          Length = 372

 Score = 39.7 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 23/128 (17%)

Query: 55  PIARQFIPQKEELNILPE----EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           PI RQ  P   E+ + PE        P+ D    PLK +         + +   C   C 
Sbjct: 9   PILRQENP---EMPVRPEIILPAMSIPVLDRLERPLKDLR--------ISVTDRCNFRCV 57

Query: 111 FCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           +C  +++ G          +LS ++          +  + ++  TGG+PL+   K ++++
Sbjct: 58  YCMPKQVFGKDFRFIPHSDMLSFEEIARLARLFVAR-GVEKIRLTGGEPLL--RKNVERL 114

Query: 166 LKTLRYIK 173
           ++ L  +K
Sbjct: 115 IEQLSRLK 122


>gi|257066655|ref|YP_003152911.1| RNA modification enzyme, MiaB family [Anaerococcus prevotii DSM
           20548]
 gi|256798535|gb|ACV29190.1| RNA modification enzyme, MiaB family [Anaerococcus prevotii DSM
           20548]
          Length = 431

 Score = 39.7 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 19/118 (16%), Positives = 44/118 (37%), Gaps = 16/118 (13%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
            R  +K+   C +YC +C      G+   +      K+ +        ++   E++ TG 
Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNIASRDMDSIKKEAKRL-----AQNGYKEIVLTGI 196

Query: 153 DPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                         L  V++ +     ++ +R  S    ++P+ I  + ++ +K   K
Sbjct: 197 HVASYGKDLRNGTSLIDVIEEVSKTDGIERIRLSS----MEPRHITRDFLERMKATEK 250


>gi|126172537|ref|YP_001048686.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
           OS155]
 gi|152998830|ref|YP_001364511.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
           OS185]
 gi|217971490|ref|YP_002356241.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
           OS223]
 gi|125995742|gb|ABN59817.1| GTP cyclohydrolase subunit MoaA [Shewanella baltica OS155]
 gi|151363448|gb|ABS06448.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
           OS185]
 gi|217496625|gb|ACK44818.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica
           OS223]
          Length = 337

 Score = 39.7 bits (92), Expect = 0.76,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 17/160 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +  VC   C +C         K   LS  +    ++   +     ++  TGG+P +  
Sbjct: 28  MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIANLVSAFSQ-VGTQKIRITGGEPTLRK 86

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
                 +++ +         R H+     +  R+     +      + + +++ +  P  
Sbjct: 87  D--FTDIIRVVADNP-----RIHTIATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139

Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
             + +      E +  I    +AG   +   +VLLKG+ND
Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179


>gi|317124847|ref|YP_004098959.1| GTP cyclohydrolase subunit MoaA [Intrasporangium calvum DSM 43043]
 gi|315588935|gb|ADU48232.1| GTP cyclohydrolase subunit MoaA [Intrasporangium calvum DSM 43043]
          Length = 350

 Score = 39.7 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 59/170 (34%), Gaps = 36/170 (21%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E +    +  +LS ++    +        + +V  TGG+PL+ 
Sbjct: 37  VSVTDRCNLRCTYCMPAEGLPWMPQAEMLSDEEMLRLIGLFVRD-GVTQVRLTGGEPLL- 94

Query: 158 SHKRLQKVLKTLRYIKHVQIL----------RFHSRV-------PIVDPQRINPELIQCL 200
             + L  ++  +  ++    +          R   R+         V    I+ E    L
Sbjct: 95  -RRSLVDLVAGIASLEPRPRIAMTTNGVGLDRIAHRLAAAGLDRVNVSLDTIDSETFTRL 153

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIND 249
               +                +    +   A+AG+  +   +V ++G+ND
Sbjct: 154 TRRDR--------------LPDVELGLKAAADAGLTPVKVNAVAMRGVND 189


>gi|197119727|ref|YP_002140154.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197089087|gb|ACH40358.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase,
           DUF3463-containing protein [Geobacter bemidjiensis Bem]
          Length = 332

 Score = 39.7 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 29/188 (15%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           + +YP  ++L+  H+C + C  C R          ++S    +  L  + E      V  
Sbjct: 23  IEKYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMS---LKQCLDSVDECPAP-VVTI 78

Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           TGG+P +     + ++++  L   KH+      +   +++        +  +K     + 
Sbjct: 79  TGGEPFLYP--HIFQLIEKVLERGKHIY---LCTNALLLEKA------LDSMKPHP-NLV 126

Query: 209 IAIHA-----NHPY--EFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEILANLM 258
           I +H       H    E       A+S +  A   G  L + + + K    D   +  L 
Sbjct: 127 INVHMDGMEETHDRILERPGTFKIAMSAIRKAKQLGFRLCTNTTIFK--ETDLIEIEMLF 184

Query: 259 RTFVELRI 266
               ++ +
Sbjct: 185 SHLKDIGV 192


>gi|330909553|gb|EGH38067.1| radical SAM family protein HutW [Escherichia coli AA86]
          Length = 419

 Score = 39.7 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%)

Query: 94  PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
            +R++   +  C  +C FC F +           +    ++ E  A + + +   I  V 
Sbjct: 30  RNRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSGPIHAVY 89

Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
           F GG P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 90  FGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138


>gi|298290897|ref|YP_003692836.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM
           506]
 gi|296927408|gb|ADH88217.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM
           506]
          Length = 348

 Score = 39.7 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 23/165 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +    +  + ++  TGG+PL+  
Sbjct: 33  VSVTDRCDFRCVYCMAEHMTFLPKPELLTLEELDRLCSAFVAR-GVRKLRLTGGEPLVRR 91

Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
                 + L + L +   ++ + +    S++      R   EL  C     K + +++  
Sbjct: 92  DVMTLFRSLSRHLDS-GALEELTLTTNGSQL-----ARFASELADC---GVKRINVSLDT 142

Query: 214 NHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
             P  F             A I     AGI +   +V L+G N+D
Sbjct: 143 LDPQRFRALTRWGDLSKVLAGIDAAQAAGIHVKLNAVALRGENED 187


>gi|158604990|gb|EAT98763.2| asparate kinase, monofunctional class [Campylobacter concisus
           13826]
          Length = 400

 Score = 39.7 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 23/166 (13%)

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           IFT  D +  +  R++K  K L  I + ++L   S    V   R     ++  K+    +
Sbjct: 171 IFTDVDGVYTTDPRIEKKAKKLEKISYDEMLELASAGAKVLQNR----SVELAKKLNVKL 226

Query: 208 YIAIHANHPYEFSEEAIA-AISRLANAGIIL-LSQS-VLLKGINDDPEILANLMRTFVEL 264
                 NH  E +  A    +  +  +GI L  +Q+ V L+G+ D P I A +       
Sbjct: 227 ITRSSFNH-NEGTLIAKEDNMEAVLVSGIALDKNQARVTLRGVVDKPGIAAEIFTALAHQ 285

Query: 265 RIKPYYLHHPDL-AAGTSH-------FRLTIEEGQKIVASLKEKIS 302
            I      + D+      H       F +   E   +     +K+S
Sbjct: 286 NI------NVDMIIQNVGHDGTTNLGFTVPQNE-LDLAKETMQKLS 324


>gi|157163983|ref|YP_001467151.1| aspartate kinase [Campylobacter concisus 13826]
          Length = 399

 Score = 39.7 bits (92), Expect = 0.77,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 23/166 (13%)

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           IFT  D +  +  R++K  K L  I + ++L   S    V   R     ++  K+    +
Sbjct: 170 IFTDVDGVYTTDPRIEKKAKKLEKISYDEMLELASAGAKVLQNR----SVELAKKLNVKL 225

Query: 208 YIAIHANHPYEFSEEAIA-AISRLANAGIIL-LSQS-VLLKGINDDPEILANLMRTFVEL 264
                 NH  E +  A    +  +  +GI L  +Q+ V L+G+ D P I A +       
Sbjct: 226 ITRSSFNH-NEGTLIAKEDNMEAVLVSGIALDKNQARVTLRGVVDKPGIAAEIFTALAHQ 284

Query: 265 RIKPYYLHHPDL-AAGTSH-------FRLTIEEGQKIVASLKEKIS 302
            I      + D+      H       F +   E   +     +K+S
Sbjct: 285 NI------NVDMIIQNVGHDGTTNLGFTVPQNE-LDLAKETMQKLS 323


>gi|254884451|ref|ZP_05257161.1| moaA/nifB/pqqE family protein [Bacteroides sp. 4_3_47FAA]
 gi|254837244|gb|EET17553.1| moaA/nifB/pqqE family protein [Bacteroides sp. 4_3_47FAA]
          Length = 503

 Score = 39.3 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 39/192 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
             L + C  +C++C            + S   T+  +  I+E    Q+ +V   GG+  +
Sbjct: 151 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 205

Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212
               ++  +LK L  R I         +++P+        +L+Q ++E G    V I++ 
Sbjct: 206 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 254

Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261
           A H    +           E +  +  L ++G+     SVL    N    +LA L+    
Sbjct: 255 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQVNVLAELLHELS 313

Query: 262 -----VELRIKP 268
                 + RI P
Sbjct: 314 HLKHIRDWRIIP 325


>gi|169829242|ref|YP_001699400.1| hypothetical protein Bsph_3790 [Lysinibacillus sphaericus C3-41]
 gi|168993730|gb|ACA41270.1| UPF0004 protein [Lysinibacillus sphaericus C3-41]
          Length = 432

 Score = 39.3 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 13/125 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149
             R  LK+   C  +C FC      G  +           +  +   Y++          
Sbjct: 130 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPQEVLHQAQQLVDAGYLEIVLTGIHTGG 189

Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            G D   L    L ++L+ L   +  ++ LR  S    ++  ++  E+I  L+E+ K V 
Sbjct: 190 YGQD---LKDYNLAQLLRDLEANVTGLKRLRISS----IEASQLTDEVIDVLRES-KIVV 241

Query: 209 IAIHA 213
             +H 
Sbjct: 242 NHLHI 246


>gi|331655124|ref|ZP_08356123.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli M718]
 gi|331047139|gb|EGI19217.1| putative oxygen independent coproporphyrinogen III oxidase
           [Escherichia coli M718]
          Length = 445

 Score = 39.3 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 24/167 (14%)

Query: 39  LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGD---NNHSPLKGIVHRYP 94
           LTP  A  ++   P  D   R  +P +  + +  E+      +      SP         
Sbjct: 9   LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTASP--------R 56

Query: 95  DRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIF 149
            R++   +  C  +C FC F +           +    ++ E  A + + + + I  V F
Sbjct: 57  KRLVYLHIPFCATHCTFCGFYQNRFDEDACAHYTDALIREIEMEADSVLHQSAPIHAVYF 116

Query: 150 TGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRIN 193
            GG P  LS   L +++ TLR    +     +    RV   D +RI+
Sbjct: 117 GGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERID 163


>gi|295109586|emb|CBL23539.1| MiaB-like tRNA modifying enzyme [Ruminococcus obeum A2-162]
          Length = 438

 Score = 39.3 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 27/130 (20%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIWEVIFTGGD 153
           R  +K+   C  +C +C     +   +G V S K  D    +  +       EV+ TG  
Sbjct: 145 RAYIKVQDGCNQFCTYCI----IPFARGRVRSRKIADVLREVETLAS-KGYKEVVLTGI- 198

Query: 154 PLILS----------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
              LS           + L  +++ +  +  +Q +R  S    ++P+ I  E ++ +   
Sbjct: 199 --HLSSYGVDFPKEERESLLSLIQAVSKVAGIQRIRLGS----LEPRIITEEFLEGIVAT 252

Query: 204 GKPVYIAIHA 213
           GK   +  H 
Sbjct: 253 GK---VCPHF 259


>gi|288553123|ref|YP_003425058.1| molybdenum cofactor biosynthesis protein A [Bacillus pseudofirmus
           OF4]
 gi|288544283|gb|ADC48166.1| molybdenum cofactor biosynthesis protein A [Bacillus pseudofirmus
           OF4]
          Length = 307

 Score = 39.3 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 18/139 (12%)

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           K  +LS ++         + S I ++  TGG+PL+     + +++  LR    +  +   
Sbjct: 15  KDELLSFEEITRLTTLFTKASSIEKLRITGGEPLMRKD--VDQLIDQLRRATKIDDIAMT 72

Query: 182 SRVPIVDPQRINPELIQCLKEAG-KPVYIAI-HANHPY--EFSE------EAIAAISRLA 231
           +         + P++   LKEAG K V +++   N     E +       + +  +   A
Sbjct: 73  TNGV------MLPKMASRLKEAGLKRVTVSLDSLNDKRFGEINGRGIGVDQVLKGMDAAA 126

Query: 232 NAGIILLSQSVLLKGINDD 250
            AG+ +    V+ KG+ND 
Sbjct: 127 EAGLGVKVNMVVQKGVNDH 145


>gi|187779327|ref|ZP_02995800.1| hypothetical protein CLOSPO_02923 [Clostridium sporogenes ATCC
           15579]
 gi|187772952|gb|EDU36754.1| hypothetical protein CLOSPO_02923 [Clostridium sporogenes ATCC
           15579]
          Length = 740

 Score = 39.3 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 20/90 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-----FTGGD 153
             +   C + C++C++    G  +    ++K     + YI +  +I+        F GG+
Sbjct: 44  FIVTEGCNLRCKYCYQVHKNGENRMDFATAK---KIVDYILDNREIFSAPGVVWDFIGGE 100

Query: 154 PLILSHKRLQKVLKTLRYIKHVQI-LRFHS 182
           PL+            +  +  +   +R  +
Sbjct: 101 PLL-----------EIELMDQITDYIRLQT 119


>gi|189424840|ref|YP_001952017.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Geobacter lovleyi SZ]
 gi|189421099|gb|ACD95497.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Geobacter lovleyi SZ]
          Length = 193

 Score = 39.3 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 53/113 (46%), Gaps = 17/113 (15%)

Query: 93  YPDRILLKLL-HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           YP ++   +    CP  C +C  + ++ + +   ++    +  + +++++  + + V+F+
Sbjct: 15  YPGKLAAVVFCQGCPWRCSYCHNQHLLDAGQSGTVT---WQEIIRFLEQRRSLLDAVVFS 71

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIVDPQRINPELIQCLKE 202
           GG+P +        + + L+ I+ +  L   H+  P   PQR    L  CL +
Sbjct: 72  GGEPTMQPT-----LPEALQAIRRMGFLTGLHTGGP--YPQR----LAACLSQ 113


>gi|317008935|gb|ADU79515.1| putative MiaB-like tRNA modifying enzyme [Helicobacter pylori
           India7]
          Length = 418

 Score = 39.3 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 14/96 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  +K+   C   C +C     R      ++  +L   D       +     + EV+ 
Sbjct: 133 KTRAFIKIQEGCDFDCNYCIIPSVRGRARSFEERKILEQVD-------LLCSKGVQEVVL 185

Query: 150 TGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
           TG +       R   + +++K L  I  ++ +R  S
Sbjct: 186 TGTNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|313892993|ref|ZP_07826570.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella sp.
           oral taxon 158 str. F0412]
 gi|313442346|gb|EFR60761.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella sp.
           oral taxon 158 str. F0412]
          Length = 482

 Score = 39.3 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 7/88 (7%)

Query: 93  YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y DRI+L       + C   C +C         K   L+ +  +  +  ++       VI
Sbjct: 90  YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQEQIKEEVIALEAMGHKRIVI 149

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
            +G DPL      L+ +L++++ I  ++
Sbjct: 150 ESGEDPLNNP---LEYILESIKTIYSIK 174


>gi|294778166|ref|ZP_06743597.1| radical SAM domain protein [Bacteroides vulgatus PC510]
 gi|294448025|gb|EFG16594.1| radical SAM domain protein [Bacteroides vulgatus PC510]
          Length = 503

 Score = 39.3 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 39/192 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
             L + C  +C++C            + S   T+  +  I+E    Q+ +V   GG+  +
Sbjct: 151 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 205

Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212
               ++  +LK L  R I         +++P+        +L+Q ++E G    V I++ 
Sbjct: 206 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 254

Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261
           A H    +           E +  +  L ++G+     SVL    N    +LA L+    
Sbjct: 255 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQVNVLAELLHELS 313

Query: 262 -----VELRIKP 268
                 + RI P
Sbjct: 314 HLKHIRDWRIIP 325


>gi|282877988|ref|ZP_06286797.1| MiaB-like protein [Prevotella buccalis ATCC 35310]
 gi|281299989|gb|EFA92349.1| MiaB-like protein [Prevotella buccalis ATCC 35310]
          Length = 453

 Score = 39.3 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 19/123 (15%), Positives = 41/123 (33%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C               +   + A      +    E++ TG +
Sbjct: 161 RTRYFLKVQDGCNYFCTYCTI-PFARGFSRNPSIASLVQQAEQ--AAEEGGKEIVLTGVN 217

Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                  + +    ++K L  ++ ++  R  S    ++P  +  ELI    ++       
Sbjct: 218 IGEFGERTDETFLDLVKALDQVEGIRRFRISS----LEPDLMADELIDYCAQSR---AFM 270

Query: 211 IHA 213
            H 
Sbjct: 271 PHF 273


>gi|253997231|ref|YP_003049295.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylotenera mobilis
           JLW8]
 gi|253983910|gb|ACT48768.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylotenera mobilis
           JLW8]
          Length = 442

 Score = 39.3 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 14/113 (12%)

Query: 91  HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           H  P R+      L ++  C  YC FC      G +     +   TEA       +  + 
Sbjct: 140 HLPPPRVEGVSAFLSIMEGCSKYCSFCVVPYTRGEEVSRPFADILTEAVQ---LAEQGVK 196

Query: 146 EVIFTGGDPLILSHKR------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
           E+   G +      +       L  +++T+  I  ++ +RF +  P    +R+
Sbjct: 197 EITLLGQNVNAYRTEYDGVESDLAMLIETIAEIPQIERIRFTTSHPNEMNERL 249


>gi|302874950|ref|YP_003843583.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307690432|ref|ZP_07632878.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302577807|gb|ADL51819.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
          Length = 454

 Score = 39.3 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 9/124 (7%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIF 149
           Y   + L ++H C + C++CF  E         +S    + AL Y+ ++S      EV  
Sbjct: 93  YVKALCLNIIHDCNLRCKYCFADEGEYHGHKGKMSIDTAKKALEYVIKRSGPRKNIEVDL 152

Query: 150 TGGDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
            GG+PL+     K + +  K L    H + +RF       +   + PE++  L +    +
Sbjct: 153 FGGEPLMAMDVIKEVVQYGKELGE-NHKKNIRF---TMTTNSTLLTPEVVDFLDKEMGNI 208

Query: 208 YIAI 211
            ++I
Sbjct: 209 ILSI 212


>gi|257062911|ref|YP_003142583.1| GTP cyclohydrolase subunit MoaA [Slackia heliotrinireducens DSM
           20476]
 gi|256790564|gb|ACV21234.1| GTP cyclohydrolase subunit MoaA [Slackia heliotrinireducens DSM
           20476]
          Length = 333

 Score = 39.3 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 69/180 (38%), Gaps = 24/180 (13%)

Query: 94  PDRIL----LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVI 148
             R++    + L   C + CR+C   E V +     +LS ++ E  +  +     I  + 
Sbjct: 5   HGRVIDYLRISLTDRCNLRCRYCMPEEGVSALSHEDILSLEEIERIIR-VAAGMGISRLR 63

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--- 205
            TGG+PL+   K +  ++K       ++ +   +         + P++   LKEAG    
Sbjct: 64  LTGGEPLV--RKGIAGLIKEAMRTPGIESVALTTNGI------LLPKMAAELKEAGLSRV 115

Query: 206 PVYIAI------HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258
            + +        H         + +A I     AG   +   +V+++ +N D    A + 
Sbjct: 116 NISLDTLDEEQFHYITRRGHVADVMAGIDAALEAGFNPVKINAVVVRSLNQDLYEFARMS 175


>gi|167757698|ref|ZP_02429825.1| hypothetical protein CLOSCI_00028 [Clostridium scindens ATCC 35704]
 gi|167664580|gb|EDS08710.1| hypothetical protein CLOSCI_00028 [Clostridium scindens ATCC 35704]
          Length = 427

 Score = 39.3 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 29/131 (22%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  +K+   C  +C +C     R  +      +V+  ++ E        ++   EV+ 
Sbjct: 141 HTRAYIKVQDGCNQFCSYCIIPYARGRVRSRSHDSVI--REVEEL-----ARNGYKEVVL 193

Query: 150 TGGDPLILS-------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           TG     LS          L  +L  +  I+ ++ +R  S    ++P+ I  E  + +  
Sbjct: 194 TGI---HLSSYGVDTGDDLLSLILS-IHEIEGIRRIRLGS----LEPRIITEEFAKTIAG 245

Query: 203 AGKPVYIAIHA 213
             K   +  H 
Sbjct: 246 LPK---MCPHF 253


>gi|114617065|ref|XP_001150394.1| PREDICTED: leucine zipper protein 5 isoform 8 [Pan troglodytes]
          Length = 1096

 Score = 39.3 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%)

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
           +  V       +  +     + Y+    +  E + +         K+L  +LK L     
Sbjct: 744 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 797

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
            ++ L   +  P   P+  +      L+  G    ++IH  H   F  E    +S L + 
Sbjct: 798 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSMLEDT 850

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
           G  L S+  +L  I D  E    L R   + +I   YL           G   F++  ++
Sbjct: 851 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 907

Query: 289 EGQKIVASLKE 299
               I+ ++K 
Sbjct: 908 RSLGIMQTVKG 918


>gi|330836389|ref|YP_004411030.1| Radical SAM domain-containing protein [Spirochaeta coccoides DSM
           17374]
 gi|329748292|gb|AEC01648.1| Radical SAM domain protein [Spirochaeta coccoides DSM 17374]
          Length = 310

 Score = 39.3 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 6/63 (9%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           YP +  + +   C + C+ C         + T LS KD  + + Y+++  +I E+   GG
Sbjct: 8   YPQKFNVLITSKCNLRCKHC-----YLDPRQTELSVKDFSSIIDYLKK-IKIKELCIEGG 61

Query: 153 DPL 155
           +PL
Sbjct: 62  EPL 64


>gi|317054889|ref|YP_004103356.1| Radical SAM domain-containing protein [Ruminococcus albus 7]
 gi|315447158|gb|ADU20722.1| Radical SAM domain protein [Ruminococcus albus 7]
          Length = 334

 Score = 39.3 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 37/81 (45%), Gaps = 7/81 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKSQIWEVIFTG 151
           ++    + C + C +C+   M  + K   ++ +  +AA+  +      + +    V F G
Sbjct: 3   VVFWTTNDCNLNCSYCY-NRMSNNIKKEYMTREVADAAIDMLTKLDCWKTADEIAVQFHG 61

Query: 152 GDPLILSHKRLQKVLKTLRYI 172
           G+PL ++   ++ +++    +
Sbjct: 62  GEPL-MNCDIIEYIMERFEAL 81


>gi|152985383|ref|YP_001347577.1| hypothetical protein PSPA7_2205 [Pseudomonas aeruginosa PA7]
 gi|150960541|gb|ABR82566.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 298

 Score = 39.3 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 9/87 (10%)

Query: 97  ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152
           ++L + + C    C FC   EM    +    +  + E  L  I+   +   +  V    G
Sbjct: 24  LILPVTNGCSWNRCGFC---EMYTQPQKKFRARDEAE-VLEEIRRCGERLIVKRVFLADG 79

Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
           D L+L  +RL  VL+ +R  +  V+ +
Sbjct: 80  DALVLPTRRLLVVLEAIRRHLPEVERV 106


>gi|312135098|ref|YP_004002436.1| RNA modification enzyme, miab family [Caldicellulosiruptor
           owensensis OL]
 gi|311775149|gb|ADQ04636.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           owensensis OL]
          Length = 434

 Score = 39.3 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 47/124 (37%), Gaps = 9/124 (7%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C  +C +C      G+ +   L  +  E  +  +       E + TG +
Sbjct: 141 RSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSL--ESIEEEVRRLVSN-GYKEFVITGIN 197

Query: 154 -PLILSHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                        L  V++ +  I+ V+ +R  S  P++  ++    L+    +    ++
Sbjct: 198 ISAYGKDLDGKITLIDVIERINEIEGVKRIRLSSLEPLIMSEQFISRLLS-FDKLCHHLH 256

Query: 209 IAIH 212
           +++ 
Sbjct: 257 LSLQ 260


>gi|302871917|ref|YP_003840553.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574776|gb|ADL42567.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 433

 Score = 39.3 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 47/124 (37%), Gaps = 9/124 (7%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C  +C +C      G+ +   L  +  E  +  +       E + TG +
Sbjct: 141 RSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSL--ESIEEEVRRLVSN-GYKEFVITGIN 197

Query: 154 -PLILSHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                        L  V++ +  I+ V+ +R  S  P++  ++    L+    +    ++
Sbjct: 198 ISAYGKDLDGKITLIDVIERINEIEGVKRIRLSSLEPLIMSEQFISRLLS-FDKLCHHLH 256

Query: 209 IAIH 212
           +++ 
Sbjct: 257 LSLQ 260


>gi|303229415|ref|ZP_07316205.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella
           atypica ACS-134-V-Col7a]
 gi|302515951|gb|EFL57903.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella
           atypica ACS-134-V-Col7a]
          Length = 472

 Score = 39.3 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 93  YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y DRI+L       + C   C +C         K   L+ +  +  +  ++       VI
Sbjct: 80  YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQEQIKEEVIALEAMGHKRIVI 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
            +G DPL      L  +L++++ I  ++
Sbjct: 140 ESGEDPLNNP---LDYILESIKTIYSIK 164


>gi|206602846|gb|EDZ39327.1| Putative oxygen-independent coproporphyrinogen III oxidase
           [Leptospirillum sp. Group II '5-way CG']
          Length = 389

 Score = 39.3 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 30/123 (24%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-------------KS 142
           R L   +  CP  C +C           ++  S  TE A AY++               S
Sbjct: 12  RTLYVQVPFCPERCHYC-----------SLPVSLQTERAPAYLRALFREKKRLMEREDLS 60

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLK 201
            +  +   GG P +L    LQ++L+ L+  +  +  +   SR     P  + PE++  L+
Sbjct: 61  GLETLYVGGGTPTVLPLPHLQELLEELQKGLPPLAEITVESR-----PDTVTPEILHRLR 115

Query: 202 EAG 204
            +G
Sbjct: 116 SSG 118


>gi|159044234|ref|YP_001533028.1| hypothetical protein Dshi_1685 [Dinoroseobacter shibae DFL 12]
 gi|157911994|gb|ABV93427.1| hypothetical protein Dshi_1685 [Dinoroseobacter shibae DFL 12]
          Length = 314

 Score = 39.3 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 25/158 (15%), Positives = 61/158 (38%), Gaps = 20/158 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGG 152
           P  +      +C + C  C+      + +   +++ +    L  +++++  + E+ FTGG
Sbjct: 31  PQTLWFNTGTLCNIECANCYIESSPTNDRLVYITAAEVTDYLDQLEDRNWGVREIAFTGG 90

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVYI 209
           +P  ++ + ++     L     V IL        + P     +   L++     G  + +
Sbjct: 91  EPF-MNPEMIEMTEAALARGYEVLIL-----TNAMLPMMRKTMREGLLRLHAAYGDKLTL 144

Query: 210 AIHANHPYE-FSEE---------AIAAISRLANAGIIL 237
            I  +H  E   +E          +  ++ L + GI +
Sbjct: 145 RISVDHWSEKLHDEERGKGSFAKTLQGMAWLRDNGIRM 182


>gi|107102506|ref|ZP_01366424.1| hypothetical protein PaerPA_01003569 [Pseudomonas aeruginosa PACS2]
          Length = 298

 Score = 39.3 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 9/87 (10%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152
           ++L + + C    C FC     + +Q      ++D    L  I+   +   +  V    G
Sbjct: 24  LILPVTNGCSWNKCGFC----EMYTQPQKKFRARDENEVLEEIRRCGERLIVKRVFLADG 79

Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
           D L+L  +RL  VL+ +R  +  V+ +
Sbjct: 80  DALVLPTRRLLAVLQAIRQHLPEVERV 106


>gi|296185249|ref|ZP_06853659.1| radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|296050083|gb|EFG89507.1| radical SAM domain protein [Clostridium carboxidivorans P7]
          Length = 328

 Score = 39.3 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C +YC  C+R    G +    L+++  +  +  I + +    +IF+GG+PL+
Sbjct: 4   VSWNTTNKCNMYCSHCYRD--SGKKYKEELTTEQGKKLIDEIAK-AGFKMMIFSGGEPLM 60

Query: 157 LSH-KRLQKVLKTLRYIK 173
                 L +    L  I 
Sbjct: 61  RKDIFELIQYASDLGVIP 78


>gi|288925693|ref|ZP_06419625.1| translation initiation factor IF-1 [Prevotella buccae D17]
 gi|294674749|ref|YP_003575365.1| translation initiation factor IF-1 [Prevotella ruminicola 23]
 gi|315606482|ref|ZP_07881497.1| translation initiation factor IF-1 [Prevotella buccae ATCC 33574]
 gi|317503958|ref|ZP_07961966.1| translation initiation factor IF-1 [Prevotella salivae DSM 15606]
 gi|288337631|gb|EFC75985.1| translation initiation factor IF-1 [Prevotella buccae D17]
 gi|294473082|gb|ADE82471.1| translation initiation factor IF-1 [Prevotella ruminicola 23]
 gi|315251888|gb|EFU31862.1| translation initiation factor IF-1 [Prevotella buccae ATCC 33574]
 gi|315664984|gb|EFV04643.1| translation initiation factor IF-1 [Prevotella salivae DSM 15606]
          Length = 72

 Score = 39.3 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ +E G +I+      ISG  +  YI  LPG   KV++  +++ K   G     
Sbjct: 22  FRVELENGVQII----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70


>gi|257452357|ref|ZP_05617656.1| radical SAM domain-containing protein [Fusobacterium sp. 3_1_5R]
 gi|257465851|ref|ZP_05630162.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|315917008|ref|ZP_07913248.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|317058900|ref|ZP_07923385.1| radical SAM domain-containing protein [Fusobacterium sp. 3_1_5R]
 gi|313684576|gb|EFS21411.1| radical SAM domain-containing protein [Fusobacterium sp. 3_1_5R]
 gi|313690883|gb|EFS27718.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans
           ATCC 25563]
          Length = 222

 Score = 39.3 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 5/75 (6%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            L      C + C +C  +    + K +  +    E  L+ + ++ +I  +  TGG+PL+
Sbjct: 24  ALFIRFQYCNLNCSYCDTKW--ANSKNSPFTWMSLEEILS-LAKEKRIKNITLTGGEPLL 80

Query: 157 LSHKRLQKVLKTLRY 171
            +   ++ +L+    
Sbjct: 81  QTD--IRSLLEAFSK 93


>gi|255524292|ref|ZP_05391250.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
 gi|255511975|gb|EET88257.1| Radical SAM domain protein [Clostridium carboxidivorans P7]
          Length = 328

 Score = 39.3 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C +YC  C+R    G +    L+++  +  +  I + +    +IF+GG+PL+
Sbjct: 4   VSWNTTNKCNMYCSHCYRD--SGKKYKEELTTEQGKKLIDEIAK-AGFKMMIFSGGEPLM 60

Query: 157 LSH-KRLQKVLKTLRYIK 173
                 L +    L  I 
Sbjct: 61  RKDIFELIQYASDLGVIP 78


>gi|257791825|ref|YP_003182431.1| Radical SAM domain-containing protein [Eggerthella lenta DSM 2243]
 gi|257475722|gb|ACV56042.1| Radical SAM domain protein [Eggerthella lenta DSM 2243]
          Length = 333

 Score = 39.3 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 43/213 (20%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C + C  C++           LS+ + +  +  I   +    +IF+GG+PL+
Sbjct: 3   VSWMTTNKCNLKCVHCYQDAE--EATDRELSTDEGKKMIDEIAR-AGFKVMIFSGGEPLM 59

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKPVYIAIHAN 214
                + +++            R   R P+       I PE+   LKEAG    + I  +
Sbjct: 60  RPD--IYELVAHAA--------RAGLR-PVFGSNGTLITPEVALRLKEAG-ACAMGISVD 107

Query: 215 ------HPY----EFSEEAIAA-ISRLANAGIILLSQSVLLKGIND-DPEILANLMRTFV 262
                 H      E + +   A I     AG+    Q  L   + D + + +  +    V
Sbjct: 108 SLDAAKHDRFRGLERAYDLTMAGIEACKQAGLPF--Q--LHTTVVDWNRDEVCAITDFAV 163

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
           E+    +Y+           F + +  G+ I  
Sbjct: 164 EIGAMAHYVF----------FLIPVGRGKFIQE 186


>gi|269798345|ref|YP_003312245.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula DSM
           2008]
 gi|269094974|gb|ACZ24965.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula DSM
           2008]
          Length = 321

 Score = 39.3 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L L   C   C +C   E+    +  +LS  +    L        +  V  TGG+PL+
Sbjct: 12  VRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMKILGAF-HHIGVKAVRLTGGEPLL 70

Query: 157 LSHKRLQKVLKTLRY 171
                ++++L  ++ 
Sbjct: 71  YP--HIEELLSRIKE 83


>gi|160903203|ref|YP_001568784.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95]
 gi|160360847|gb|ABX32461.1| Radical SAM domain protein [Petrotoga mobilis SJ95]
          Length = 448

 Score = 39.3 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 65/159 (40%), Gaps = 28/159 (17%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA---LAY-IQEKSQIWEVI 148
           Y   ++L     CP +C +C       + K      +  +     + Y ++++  + +++
Sbjct: 208 YLTYVVLVSSVGCPFHCTYC------VTPKMWKFQYRSIDKIINNIEYVLKKRPYVKDIV 261

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPV 207
           F   D  +L  K ++++LK L        +R+H  +P      R++ E+   LK+A    
Sbjct: 262 FF-DDAFLLR-KDIKELLKYLSKFD----VRYH--LPNGIHARRVDDEIALLLKKANFKT 313

Query: 208 Y--------IAIHANHPYEFS-EEAIAAISRLANAGIIL 237
                      I     ++ +  + + A++ L NAG  +
Sbjct: 314 IKLGYESYDFNIQKGTGFKVTNNDLVKAVTCLKNAGFDM 352


>gi|325958472|ref|YP_004289938.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
 gi|325329904|gb|ADZ08966.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
          Length = 515

 Score = 39.3 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 21/135 (15%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           LL++   C   CRFC    +   ++   L  K+         +K+ + +V   G    + 
Sbjct: 209 LLEVSRGCTRGCRFCMAGCIFRPRREMPL--KELLKIAEEGCQKTGLKKVALIGA--AVS 264

Query: 158 SHKRLQKVLKTLRYIK-HVQI--LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
            + +++++   L  +   V    LR  S         I   L++ LK +G          
Sbjct: 265 DYSKIEELCAGLHEMGLQVTTPSLRIES---------ITENLLEILKASGLKTITI---- 311

Query: 215 HPYEFSEEAIAAISR 229
              E + E   A ++
Sbjct: 312 -APESTWEVRKAANK 325


>gi|160880587|ref|YP_001559555.1| MiaB-like tRNA modifying enzyme YliG [Clostridium phytofermentans
           ISDg]
 gi|238065326|sp|A9KLS2|RIMO_CLOPH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|160429253|gb|ABX42816.1| MiaB-like tRNA modifying enzyme YliG [Clostridium phytofermentans
           ISDg]
          Length = 440

 Score = 39.3 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 22/114 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA----------LAYIQEKSQIWEVI 148
           LK+   C  +C +C   ++ G  + +V   +  E A          L  I +++ ++ V 
Sbjct: 148 LKIAEGCDKHCTYCIIPKIRGDYR-SVPMERLVEEAKFLSEGGVKELILIAQETTVYGVD 206

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
             G        K L ++L+ L  I  ++ +R         P+ IN ELI  LK 
Sbjct: 207 LYGK-------KMLPELLRKLCAIDGIEWIRIQ----YCYPEEINDELIDVLKS 249


>gi|325478525|gb|EGC81637.1| tRNA methylthiotransferase YqeV [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 431

 Score = 39.3 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 18/119 (15%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT---- 150
            R  +K+   C +YC +C      G+   +    +  +     + E     E++ T    
Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNI--SSRDMESIKNEAKRLAEN-GYKEIVLTGIHV 198

Query: 151 ---GGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
              G D   L +   L  V++ +     ++ +R  S    ++P+ I  E ++ +K   K
Sbjct: 199 SSYGKD---LKNGTSLIDVIEEVANTDGIERIRLSS----MEPRHITREFLERMKATKK 250


>gi|261414864|ref|YP_003248547.1| RNA modification enzyme, MiaB family [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261371320|gb|ACX74065.1| RNA modification enzyme, MiaB family [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302326764|gb|ADL25965.1| tRNA-i(6)A37 modification enzyme MiaB [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 440

 Score = 39.3 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 17/123 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIWEVIFTGG-- 152
             + +   C   C +C    + G +K      +D +  L  +       I EV+  G   
Sbjct: 151 AFVAIQRGCNKRCSYCIVPYLRGPEKY-----RDMDDVLTEVKRAADKGITEVMLLGQTV 205

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           +     +     +L  +  I  ++ +RF S  P   P+    ELI  L    K      H
Sbjct: 206 NAYKTPNADFTTLLTKVSEIGGIKRIRFTS--P--HPRHYTNELIDVLLNNPK----VCH 257

Query: 213 ANH 215
             H
Sbjct: 258 YAH 260


>gi|148548997|ref|YP_001269099.1| molybdenum cofactor synthesis domain-containing protein
           [Pseudomonas putida F1]
 gi|148513055|gb|ABQ79915.1| molybdenum cofactor synthesis domain protein [Pseudomonas putida
           F1]
          Length = 322

 Score = 39.3 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C +C    + +V +Q    LS+      +AY+ E + I  +  TGG+PL+
Sbjct: 15  VSLTAACNYACTYCVPDGKRLVAAQDE--LSADALARGVAYLIEAAGIERLRITGGEPLV 72

Query: 157 LSHKRLQKVLKTLRYIK 173
               RL   L  +  + 
Sbjct: 73  SP--RLDAFLAAVAKLD 87


>gi|290960712|ref|YP_003491894.1| hypothetical protein SCAB_63441 [Streptomyces scabiei 87.22]
 gi|260650238|emb|CBG73354.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 736

 Score = 39.3 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 18/127 (14%)

Query: 97  ILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDT----EAALAYI--QEKSQIWEV 147
           ++LK+   C + C  C+     +     + TV++ +           Y+  +    +  V
Sbjct: 27  LVLKIHSRCDLACDHCYVYEASDQSWRTRPTVIAEETLVQVARRLTEYVCARNLPSVT-V 85

Query: 148 IFTGGDPLILSHKRLQKVLKTL-RYIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAG 204
           I  GG+PL+    RL+++   L R +  V    LR H+        R+N   ++   E  
Sbjct: 86  ILHGGEPLLAGPARLERICAELTRALTPVTALDLRIHTNAV-----RLNENHLRIFDEFR 140

Query: 205 KPVYIAI 211
             + I++
Sbjct: 141 VKIGISL 147


>gi|222444854|ref|ZP_03607369.1| hypothetical protein METSMIALI_00467 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434419|gb|EEE41584.1| hypothetical protein METSMIALI_00467 [Methanobrevibacter smithii
           DSM 2375]
          Length = 376

 Score = 39.3 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 12/125 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPL 155
           +++     C   C++C+  E         +     +  + ++++ +       F GG+PL
Sbjct: 5   VMIIPTLGCQCNCKYCWGSESTKEMMDISV----IDDIITWLKDFRDDKVHFTFHGGEPL 60

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
           +  +    + L+ L  I +++     S    +    ++ ELI    +    V ++   + 
Sbjct: 61  LAGYDFYAEALEKLSKIDNLEGFSLQS---NIW--LLSDELIDLFLKY--NVAVSTSIDG 113

Query: 216 PYEFS 220
           P E +
Sbjct: 114 PEEIN 118


>gi|241662581|ref|YP_002980941.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii
           12D]
 gi|240864608|gb|ACS62269.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii
           12D]
          Length = 373

 Score = 39.3 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +++            +LS ++ E       E   + ++  TGG+
Sbjct: 48  ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMARLFIEH-GVEKIRLTGGE 106

Query: 154 PLILSH-KRLQKVLKTL 169
           PL+    +RL ++L  L
Sbjct: 107 PLLRKDIERLVEMLARL 123


>gi|148643666|ref|YP_001274179.1| arylsulfatase regulator, AslB [Methanobrevibacter smithii ATCC
           35061]
 gi|148552683|gb|ABQ87811.1| arylsulfatase regulator, AslB [Methanobrevibacter smithii ATCC
           35061]
          Length = 376

 Score = 39.3 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 12/125 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPL 155
           +++     C   C++C+  E         +     +  + ++++ +       F GG+PL
Sbjct: 5   VMIIPTLGCQCNCKYCWGSESTKEMMDISV----IDDIITWLKDFRDDKVHFTFHGGEPL 60

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
           +  +    + L+ L  I +++     S    +    ++ ELI    +    V ++   + 
Sbjct: 61  LAGYDFYAEALEKLSKIDNLEGFSLQS---NIW--LLSDELIDLFLKY--NVAVSTSIDG 113

Query: 216 PYEFS 220
           P E +
Sbjct: 114 PEEIN 118


>gi|62286584|sp|Q9X758|ANSME_KLEPN RecName: Full=Anaerobic sulfatase-maturating enzyme; Short=AnSME;
           AltName: Full=Arylsulfatase-activating protein; AltName:
           Full=Ser-type sulfatase-activating enzyme
 gi|4586202|emb|CAB40960.1| arylsulfatase activating protein [Klebsiella pneumoniae]
          Length = 395

 Score = 39.3 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 45/232 (19%), Positives = 82/232 (35%), Gaps = 34/232 (14%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135
           P+     SP+   +   P      +   C + CR+C+       +     +     E  +
Sbjct: 13  PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDETPVNKMDDARLEQFI 63

Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189
             YI  +     +I   ++ GG+PL+      +K L    RY      +   S     + 
Sbjct: 64  RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119

Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242
             IN    +  +E G  + + +  N   + +        S  + A  GI LL Q  V   
Sbjct: 120 TLINDAWCRLFREHGFIIGLGLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVDFN 179

Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
           LL  + N+     A +    V L  + Y    P ++ G +     + EG ++
Sbjct: 180 LLVVVHNEMAAHAAAIYVRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225


>gi|23014017|ref|ZP_00053858.1| COG2896: Molybdenum cofactor biosynthesis enzyme [Magnetospirillum
           magnetotacticum MS-1]
          Length = 324

 Score = 39.3 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 27/167 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C + C +C   ++    +  +L+ ++             + ++  TGG+PL+  
Sbjct: 14  LSVTDRCDLRCVYCMAEDVTFKPRAELLTLEELGRLCEAFVR-KGVRKIRLTGGEPLV-- 70

Query: 159 HKRLQKVLKTLRYI------KHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211
            + +  ++  L  +        V +    +++          +    L  AG + + +++
Sbjct: 71  RRNIMSLIDRLGALVADGRLDEVTLTTNGTQL---------AKHADGLATAGVRRINVSL 121

Query: 212 HANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
               P  F+              I     AG+ +   +V L GIND 
Sbjct: 122 DTLDPTRFTSLTRHGRLEQVMEGIFAAKAAGLAVRINTVTLPGINDH 168


>gi|298385677|ref|ZP_06995235.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
 gi|298261818|gb|EFI04684.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14]
          Length = 436

 Score = 39.3 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 29/227 (12%), Positives = 71/227 (31%), Gaps = 71/227 (31%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  +      ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKPMEEIVDEVRYLVSQGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G D  +   + L ++++ +  I  V+ +R H       P     +L + ++E        
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
                           +                L+ I+D+   +  LMR           
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
                         ++ E+  K++   ++++ G+  +   ++  PG 
Sbjct: 268 --------------VSKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGE 300


>gi|291459250|ref|ZP_06598640.1| radical SAM domain protein [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291418504|gb|EFE92223.1| radical SAM domain protein [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 461

 Score = 39.3 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 9/118 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C +CF  +     K  ++S +  + AL ++ E S      EV F GG+PL
Sbjct: 101 LLVSHRCNLNCSYCFASQGSFCGKQGLMSFETGKRALDFLIENSGSRRNLEVDFFGGEPL 160

Query: 156 ILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           + + +  +K++   R I  +H +  RF       +   +  E+I+        V +++
Sbjct: 161 V-NFEVCRKLVSYARSIEKEHGKNFRF---TLTTNGVSVTDEVIEWANRECYNVVLSL 214


>gi|182412684|ref|YP_001817750.1| radical SAM domain-containing protein [Opitutus terrae PB90-1]
 gi|177839898|gb|ACB74150.1| Radical SAM domain protein [Opitutus terrae PB90-1]
          Length = 231

 Score = 39.3 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 6/89 (6%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           +      C + C +C   +   +           E  +  +Q       V+ TGG+P+I 
Sbjct: 22  VFVRTSGCNLRCNWC---DTPYASWNPEGKPWRIEQIVREVQSHPTARHVVLTGGEPMIA 78

Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHSRVP 185
             K + ++   L+ +  H+ I    +  P
Sbjct: 79  --KEIAELAAQLKGLHYHITIETAATVAP 105


>gi|307243816|ref|ZP_07525947.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
 gi|306492819|gb|EFM64841.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678]
          Length = 457

 Score = 39.3 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 9/118 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF ++     K  ++  +  + AL Y+   S      E+ F GG+PL
Sbjct: 98  LNVAHDCNLKCKYCFAKQGDFGGKAELMPLEVGKKALDYLIANSGNRRNLEIDFFGGEPL 157

Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           +     K L K  + +      + +RF       +   ++ E I  + E    V +++
Sbjct: 158 MNWPVVKELVKYGREVEK-PAGKNIRF---TITTNGVLLDDEKIDFINEHMHNVVLSL 211


>gi|116747616|ref|YP_844303.1| RNA modification protein [Syntrophobacter fumaroxidans MPOB]
 gi|116696680|gb|ABK15868.1| RNA modification enzyme, MiaB family [Syntrophobacter fumaroxidans
           MPOB]
          Length = 440

 Score = 39.3 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 24/149 (16%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVI 148
           H    R  LK+   C  YC +C     V         S   +  L+ ++   ++   EVI
Sbjct: 142 HTGRTRAYLKVQDGCNAYCSYC-----VVPYTRGRSRSLPADEVLSRLRRFVEVGYREVI 196

Query: 149 FT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
            T       G D  +   + L  +L  +        +R  S  P+             L+
Sbjct: 197 LTGIHLGQWGKD--LTPTRDLAGLLDRIGDSDSPPRVRLSSLEPLEWSA-------GLLR 247

Query: 202 EAGKPVYIAIHANHP-YEFSEEAIAAISR 229
                 +I  H + P     ++ +AA+ R
Sbjct: 248 RISTVPWICPHFHIPLQSGDDDVLAAMHR 276


>gi|326392152|ref|ZP_08213626.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
 gi|325991807|gb|EGD50325.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200]
          Length = 460

 Score = 39.3 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLI 156
           +   + C + C++C+      +Q+  +++ +  E    +I+    ++  ++F GG+PL+
Sbjct: 86  IHTSNECNLKCKYCYANHGDYNQEEAIVTEEIAEKVADFIKLNFPKVKVIVFFGGEPLL 144


>gi|325968873|ref|YP_004245065.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
 gi|323708076|gb|ADY01563.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
          Length = 362

 Score = 39.3 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 10/103 (9%)

Query: 84  SPLKGIVHRYPDRI-------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           S  + +  +Y   +       +L   +VC + CRFC    + G  +   LS+++    + 
Sbjct: 36  SAAEYLTRKYFGNVVTFIPNMILNYTNVCVIACRFCAFYRLPGHPEAYTLSAEEALRRVM 95

Query: 137 YIQEKSQIWEVIFTGG-DPLILSHKRLQKVLKTL-RYIKHVQI 177
            I  +  I +V+  GG +P  L  +  +++ K L   + HV I
Sbjct: 96  AIDREFGIRQVLIQGGINP-ELDIEYYERLFKALKAKLPHVAI 137


>gi|294794006|ref|ZP_06759143.1| putative ThiH protein [Veillonella sp. 3_1_44]
 gi|294455576|gb|EFG23948.1| putative ThiH protein [Veillonella sp. 3_1_44]
          Length = 482

 Score = 39.3 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 7/88 (7%)

Query: 93  YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y DRI+L       + C   C +C         K   L+       +  ++       VI
Sbjct: 90  YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 149

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
            +G DPL      L+ +L++++ I  ++
Sbjct: 150 ESGEDPLNNP---LEYILESIKTIYSIK 174


>gi|302873839|ref|YP_003842472.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|307689916|ref|ZP_07632362.1| Radical SAM domain-containing protein [Clostridium cellulovorans
           743B]
 gi|302576696|gb|ADL50708.1| Radical SAM domain protein [Clostridium cellulovorans 743B]
          Length = 460

 Score = 39.3 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 38/186 (20%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
           P  + + L H C   C +CF     G  K   L++ +    L  I++  +  I +   +G
Sbjct: 118 PGEMTIILTHNCNFRCIYCF--NNSGEAKTVQLNTNEW---LEVIKQARELGIVKCTVSG 172

Query: 152 GDPLILSHKRLQKVLKTLRYIK----HVQILRFHSRVPIVDPQRINPELIQCLKEAGKP- 206
           G+P++            LR I      V I    S         ++  +++  KE G P 
Sbjct: 173 GEPMLHP-----GFFDILRAITDSGMSVYICTNGS--------LVDENVVKQFKEIGLPC 219

Query: 207 VYIAIHANHPYEFS----------EEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILA 255
           V  ++ A  P E             + I AI  L  AGI +  +SV+   +N  D   L 
Sbjct: 220 VQFSLDAGTP-EIHDKMATVKGTYPKVINAIKLLVGAGIDVYIKSVITP-VNYSDISNLI 277

Query: 256 NLMRTF 261
           +L    
Sbjct: 278 DLCSEL 283


>gi|213513990|ref|NP_001133850.1| Farnesyl pyrophosphate synthetase [Salmo salar]
 gi|209155566|gb|ACI34015.1| Farnesyl pyrophosphate synthetase [Salmo salar]
          Length = 359

 Score = 39.3 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 28/155 (18%)

Query: 157 LSHKRLQKVLKTLRYIKHV-----QILR----FHSRVPIVDPQRINPELIQCLKEAGKPV 207
           L+   L   L  LR + H      +  R      S   +V P  +  + ++     G  +
Sbjct: 39  LTDSVLTDALNRLREVLHYNTPGGKRNRGLSVIGSLRELVPPTELTQDAVRRALLVGWCI 98

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQS-------VLLKGINDDPEILANLMRT 260
                     E  +        + +A +    Q        V L  IND   +  ++ R 
Sbjct: 99  ----------ELLQAFFLVADDIMDASVTRRGQPCWYKRERVGLDAINDSFLLEGSIYRL 148

Query: 261 FVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
                R +PYY+H  +L   TS F+  + +   ++
Sbjct: 149 LRRHCRAQPYYVHLLELFTETS-FQTELGQALDLM 182


>gi|154150498|ref|YP_001404116.1| radical SAM domain-containing protein [Candidatus Methanoregula
           boonei 6A8]
 gi|153999050|gb|ABS55473.1| Radical SAM domain protein [Methanoregula boonei 6A8]
          Length = 391

 Score = 39.3 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 10/108 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +   L   C + C  C+ R    S     LS+ +  A +  +   + I  VIFTGG+PL+
Sbjct: 40  VFWNLTDRCNLSCTHCYSRSAPDSPTQGELSTNEALAFIDDLAA-AGIPLVIFTGGEPLV 98

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                    +  L    H +     +     +   I  E+   +K +G
Sbjct: 99  RPD------IWQLAG--HCRDKGIKT-ALSTNGTLITDEVAAKIKASG 137


>gi|119357341|ref|YP_911985.1| radical SAM protein [Chlorobium phaeobacteroides DSM 266]
 gi|205829698|sp|A1BGN4|RLMN_CHLPD RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|119354690|gb|ABL65561.1| 23S rRNA m(2)A-2503 methyltransferase [Chlorobium phaeobacteroides
           DSM 266]
          Length = 363

 Score = 39.3 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 41/184 (22%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQ---EKSQIWEVIFTG-GDPLI 156
            CP+ CRFC   +     K  + + +  +       +I+   E ++I  ++F G G+PL 
Sbjct: 118 GCPLQCRFCASGQ--TGFKRNLSADEIIDQVFSLNDFIRTKHESNEITNIVFMGMGEPL- 174

Query: 157 LSHKRLQKVLKTLRY------IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VY 208
           L+ + L++ ++ L        +   + +   +    + P       I  L ++G    + 
Sbjct: 175 LNFENLKESIEVLSDQSYKFNLPQ-RKITIST--VGIIPG------INELGKSGLKTKLA 225

Query: 209 IAIHANHPYE----FSEEAIA-AISRLANAGIILLSQS------V--LLKGINDDPEILA 255
           I++H +   E        A   ++++L        SQ+      V  LLKGIND  E   
Sbjct: 226 ISLH-SASQETRESLIPVASEFSLTQLRKTLSEYTSQTGEPVTLVYMLLKGINDSVEDAR 284

Query: 256 NLMR 259
            L++
Sbjct: 285 LLVK 288


>gi|282163554|ref|YP_003355939.1| hypothetical protein MCP_0884 [Methanocella paludicola SANAE]
 gi|282155868|dbj|BAI60956.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 366

 Score = 39.3 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 3/83 (3%)

Query: 89  IVHRYP-DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWE 146
           +V +YP ++I   L   C ++CR C+        K T  S   +   ++        +  
Sbjct: 5   VVEKYPLNQIYFYLTEGCNLHCRHCWIAPKYQDSKHTYPSLPFNLFQSIIKQARPLGLAA 64

Query: 147 VIFTGGDPLILSH-KRLQKVLKT 168
           V  TGG+PL+      + +++K 
Sbjct: 65  VKLTGGEPLMHPDINNILELIKQ 87


>gi|257453136|ref|ZP_05618435.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_5R]
 gi|317059671|ref|ZP_07924156.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_5R]
 gi|313685347|gb|EFS22182.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_5R]
          Length = 436

 Score = 39.3 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 19/139 (13%), Positives = 47/139 (33%), Gaps = 13/139 (9%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152
            R  +K+   C  +C +C      G  +        ++ +  L  ++   +I  +    G
Sbjct: 145 TRAYVKIQDGCNEFCSYCKIPFARGKSRSRKQEKVLEEIDKLL--MEGFQEIILIGINLG 202

Query: 153 DPL--ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           D    +      + +++ +     ++ +R  S    V P RI    I   +     +   
Sbjct: 203 DYGKDLEGDISFETLVQEILKRDLLKRVRIGS----VYPDRITNSFISLFENP--KMMPH 256

Query: 211 IHANHPYEFSEEAIAAISR 229
           +H +      +  +  + R
Sbjct: 257 LHIS-LQSCDDTVLKNMKR 274


>gi|237736966|ref|ZP_04567447.1| radical SAM domain-containing protein [Fusobacterium mortiferum
           ATCC 9817]
 gi|229420828|gb|EEO35875.1| radical SAM domain-containing protein [Fusobacterium mortiferum
           ATCC 9817]
          Length = 296

 Score = 39.3 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 12/117 (10%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDP 154
           ++L++   C    C FC    M   +K  + +  + +  + + + +   +  +    GD 
Sbjct: 19  LILQITLGCSHNKCTFC---NMYKDKKFRIKTLDEIKEEIDFFRAQIKYVRRIFLADGDA 75

Query: 155 LILSHKRLQKVLKTL-RYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVY 208
           LI+    L ++L  L       + +      +  ++      PE ++ LKE G  + 
Sbjct: 76  LIIKTSTLLEILNYLNEKFPEKERVSIYASPKSLMLK----TPEELRTLKETGIELV 128


>gi|220907769|ref|YP_002483080.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
           7425]
 gi|219864380|gb|ACL44719.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC
           7425]
          Length = 495

 Score = 39.3 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 47/194 (24%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           H Y  R+ + +   C + C +C R+         G     +   +     L    +  Q+
Sbjct: 53  HHYA-RMHVAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPEEAAHKVLVIAGKIPQM 111

Query: 145 WEVIFTG-GDPLILSHK------------------------RLQKVLKTLRY--IKHVQI 177
             +   G GDPL    K                         L + +  ++   + HV  
Sbjct: 112 TVLGIAGPGDPLANPDKTFRTFELIAEKAPDIKLCLSTNGLMLPEYIDRIKQLNVDHV-T 170

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISRLANAGI 235
           +  +    +VDP+ I  ++   ++   K      A    H  +       ++  L  A I
Sbjct: 171 ITIN----MVDPE-IGAKIYPWIRWKRKRFTGVEAARILHERQM-----ESLQALKEADI 220

Query: 236 ILLSQSVLLKGIND 249
           +    SV++ GIND
Sbjct: 221 LCKVNSVMIPGIND 234


>gi|169349836|ref|ZP_02866774.1| hypothetical protein CLOSPI_00574 [Clostridium spiroforme DSM 1552]
 gi|169293404|gb|EDS75537.1| hypothetical protein CLOSPI_00574 [Clostridium spiroforme DSM 1552]
          Length = 428

 Score = 39.3 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 14/129 (10%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            I      R  LK+   C  +C +C     R  +    K +VL+   T  A  Y++    
Sbjct: 135 NIDRFKNTRAFLKIQDGCNNFCTYCIIPYARGRVRSRDKDSVLNQAKTLVANGYVEIVLT 194

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                  G D   L +     +L  L  I  ++ LR  S    ++  +I+ E+I  +   
Sbjct: 195 GIHTAGYGED---LDNYSFYDLLVDLVKIDGLKRLRISS----IETSQISDEIINLI--- 244

Query: 204 GKPVYIAIH 212
           G    I  H
Sbjct: 245 GSNDIIVDH 253


>gi|78189894|ref|YP_380232.1| Elongator protein 3/MiaB/NifB [Chlorobium chlorochromatii CaD3]
 gi|78172093|gb|ABB29189.1| GTP cyclohydrolase subunit MoaA [Chlorobium chlorochromatii CaD3]
          Length = 333

 Score = 39.3 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 35/81 (43%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C        +    +LS+ +    +  + +   I ++ FTGG+PL+ 
Sbjct: 24  LAVTSACNLRCGYCLSEAHEPATLHQPLLSTAELCTIIELLAKH-GIQKLRFTGGEPLLR 82

Query: 158 SHKRLQKVLKTLRYIKHVQIL 178
           S   +  ++   R    ++ +
Sbjct: 83  SD--IVALIAMARQHSSIRTI 101


>gi|15898449|ref|NP_343054.1| coenzyme PQQ synthesis protein E (pqqE-2) [Sulfolobus solfataricus
           P2]
 gi|227829520|ref|YP_002831299.1| radical SAM protein [Sulfolobus islandicus L.S.2.15]
 gi|229578824|ref|YP_002837222.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14]
 gi|229582436|ref|YP_002840835.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51]
 gi|284997434|ref|YP_003419201.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5]
 gi|13814874|gb|AAK41844.1| Coenzyme PQQ synthesis protein E (pqqE-2) [Sulfolobus solfataricus
           P2]
 gi|227455967|gb|ACP34654.1| Radical SAM domain protein [Sulfolobus islandicus L.S.2.15]
 gi|228009538|gb|ACP45300.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14]
 gi|228013152|gb|ACP48913.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51]
 gi|284445329|gb|ADB86831.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5]
          Length = 350

 Score = 39.3 bits (91), Expect = 0.87,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 12/119 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  +  ++   CP+ C+ C R   +       L+++++   L  I    ++  ++FTGGD
Sbjct: 7   PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELNTEESRKLLEDIARFGKV-VIVFTGGD 64

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211
           PL  S   + ++++  + +  V  +      P   P  R++ E ++ +    + + I++
Sbjct: 65  PLSRSD--IFELMEYAKSLGLVVSI-----AP--SPSHRLDDETMKIISNYARYMSISL 114


>gi|289522200|ref|ZP_06439054.1| radical SAM domain protein [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504036|gb|EFD25200.1| radical SAM domain protein [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 323

 Score = 39.3 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 6/80 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C + C+ C        ++  ++S +  EA L  I   + I  V  TGG P +  
Sbjct: 31  LNITRRCNLCCKHCHVNA--SPKREEIMSREILEACLNVIDANN-ISVVDITGGSPEMHP 87

Query: 159 HKRLQKVLKTLRYIKHVQIL 178
              L   LK L      +I+
Sbjct: 88  D--LAWFLKMLAR-PSRRII 104


>gi|253580717|ref|ZP_04857981.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848088|gb|EES76054.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 422

 Score = 39.3 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 31/132 (23%)

Query: 96  RILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R  +K+   C  +C +C     R  +   +   V+      AA  Y        EV+ TG
Sbjct: 124 RAYIKVQDGCNQFCTYCIIPYARGRVRSRKIAHVMDEVHALAAKGY-------KEVVLTG 176

Query: 152 GDPLILSH----------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
                LS           + L  +++ +  ++ ++ +R  S    ++P  I  E +Q + 
Sbjct: 177 I---HLSSYGVDFPAEEKETLLSLIRAVHEVEGIERIRLGS----LEPGIITEEFVQSIA 229

Query: 202 EAGKPVYIAIHA 213
              K   +  H 
Sbjct: 230 ALPK---MCPHF 238


>gi|238928202|ref|ZP_04659962.1| molybdenum cofactor biosynthesis protein A [Selenomonas flueggei
           ATCC 43531]
 gi|238884162|gb|EEQ47800.1| molybdenum cofactor biosynthesis protein A [Selenomonas flueggei
           ATCC 43531]
          Length = 331

 Score = 39.3 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 45/102 (44%), Gaps = 6/102 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + CR+C     V   +   VL+ ++    +  +     + +V  TGG+PL+ 
Sbjct: 14  VSVTDCCNLRCRYCMPAHGVKKLRHADVLTYEEILRDVRALAA-LGVRKVRLTGGEPLVR 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
               + ++++ L+ I  ++ +   +   ++    +  EL+  
Sbjct: 73  RD--ITRLVRGLKEIPGIETVALTTNGVLL--GTMMDELLDA 110


>gi|261418751|ref|YP_003252433.1| YfkB-like domain protein [Geobacillus sp. Y412MC61]
 gi|261375208|gb|ACX77951.1| YfkB-like domain protein [Geobacillus sp. Y412MC61]
          Length = 387

 Score = 39.3 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                +C + C  C     +  +    L     +  L  ++E   +  +  TGG+P +LS
Sbjct: 48  FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 103

Query: 159 HKRLQKVLKTLRYIKHVQILR 179
            K +++ +  L    H + +R
Sbjct: 104 LKSVEQYVVPLLRYAHERGVR 124


>gi|99034401|ref|ZP_01314414.1| hypothetical protein Wendoof_01000782 [Wolbachia endosymbiont of
           Drosophila willistoni TSC#14030-0811.24]
 gi|225630069|ref|YP_002726860.1| MiaB-like tRNA modifying enzyme [Wolbachia sp. wRi]
 gi|225592050|gb|ACN95069.1| MiaB-like tRNA modifying enzyme [Wolbachia sp. wRi]
          Length = 408

 Score = 39.3 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 33/161 (20%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +++ + C   C FC   E  G+ +   ++S      +  I+   ++   EV+FTG
Sbjct: 123 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVPINS-----IIEQIRIFVENGYQEVVFTG 177

Query: 152 GDPL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            D       +L    L  +++  L+ I  ++ LR  S + + +   ++ EL+  +    +
Sbjct: 178 VDITDFGTDLLGKPSLGSMIRRVLKDIPELKRLRL-SSIDVAE---VDDELMDLIANESR 233

Query: 206 PVYIAIHAN---------------HPYEFSEEAIAAISRLA 231
            +   +H +               H  E   E    +  L 
Sbjct: 234 -LMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 273


>gi|42520370|ref|NP_966285.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|42410108|gb|AAS14219.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 408

 Score = 39.3 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 33/161 (20%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +++ + C   C FC   E  G+ +   ++S      +  I+   ++   EV+FTG
Sbjct: 123 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVPINS-----IIEQIRIFVENGYQEVVFTG 177

Query: 152 GDPL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            D       +L    L  +++  L+ I  ++ LR  S + + +   ++ EL+  +    +
Sbjct: 178 VDITDFGTDLLGKPSLGSMIRRVLKDIPELKRLRL-SSIDVAE---VDDELMDLIANESR 233

Query: 206 PVYIAIHAN---------------HPYEFSEEAIAAISRLA 231
            +   +H +               H  E   E    +  L 
Sbjct: 234 -LMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 273


>gi|58696768|ref|ZP_00372305.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58537042|gb|EAL60178.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of
           Drosophila simulans]
          Length = 375

 Score = 39.3 bits (91), Expect = 0.88,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 33/161 (20%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +++ + C   C FC   E  G+ +   ++S      +  I+   ++   EV+FTG
Sbjct: 90  KSRAFIEIQNGCNHSCTFCSITEARGNNRSVPINS-----IIEQIRIFVENGYQEVVFTG 144

Query: 152 GDPL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            D       +L    L  +++  L+ I  ++ LR  S + + +   ++ EL+  +    +
Sbjct: 145 VDITDFGTDLLGKPSLGSMIRRVLKDIPELKRLRL-SSIDVAE---VDDELMDLIANESR 200

Query: 206 PVYIAIHAN---------------HPYEFSEEAIAAISRLA 231
            +   +H +               H  E   E    +  L 
Sbjct: 201 -LMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 240


>gi|325265342|ref|ZP_08132066.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
 gi|324029343|gb|EGB90634.1| 2-methylthioadenine synthetase [Clostridium sp. D5]
          Length = 440

 Score = 39.3 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 11/126 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             LK+   C  +C +C   ++ G+ +   +  +       Y+ E+     ++      L 
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFR--SVPMEKLLKEAQYLAEQGVKELILVAQETTLY 203

Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211
                  K L  +LK L  ++ ++ +R    V    P+ I  ELIQ +KE  K   Y+ +
Sbjct: 204 GKDIYGEKSLHLLLKELCRVQGIRWIR----VLYCYPEEITDELIQVMKEEEKICHYLDL 259

Query: 212 HANHPY 217
              H  
Sbjct: 260 PIQHAN 265


>gi|323488006|ref|ZP_08093259.1| molybdenum cofactor biosynthesis protein A [Planococcus donghaensis
           MPA1U2]
 gi|323398274|gb|EGA91067.1| molybdenum cofactor biosynthesis protein A [Planococcus donghaensis
           MPA1U2]
          Length = 338

 Score = 39.3 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+ G       K  +LS ++             + ++  TGG+
Sbjct: 19  ISVTDRCNFRCSYCMPKEVFGDDYAFLPKQELLSFEEIHRLTKVFVAM-GVKKIRLTGGE 77

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L ++++ +  ++ V+ +
Sbjct: 78  PLM--RRGLPQLVEKILSVEGVEDI 100


>gi|257064192|ref|YP_003143864.1| pyruvate-formate lyase-activating enzyme [Slackia
           heliotrinireducens DSM 20476]
 gi|256791845|gb|ACV22515.1| pyruvate-formate lyase-activating enzyme [Slackia
           heliotrinireducens DSM 20476]
          Length = 201

 Score = 39.3 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P   ++     C   C  C   E+  +     + +     AL  + + S    + FTGGD
Sbjct: 15  PGSRIVVWTVGCSKRCPGCANPELWEASDANRIDNDQLAEALVRMAKASGTRAITFTGGD 74

Query: 154 PLILSHKRLQKVLKTLR 170
           PL      L  VL+++R
Sbjct: 75  PLEQPDD-LAWVLRSIR 90


>gi|225018731|ref|ZP_03707923.1| hypothetical protein CLOSTMETH_02681 [Clostridium methylpentosum
           DSM 5476]
 gi|224948459|gb|EEG29668.1| hypothetical protein CLOSTMETH_02681 [Clostridium methylpentosum
           DSM 5476]
          Length = 409

 Score = 39.3 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 15/118 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  +K+   C  YC +C   +  G  +   ++  +    L  +        V+     
Sbjct: 122 RTRAFVKIEDGCDRYCTYCIIPKARGPVRSKQMA--ELREELRDLAANGYKEVVLVGINL 179

Query: 151 ---GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
              G D   L + RL   ++    +  ++ +R  S    ++P+ +  E IQ L    K
Sbjct: 180 SSYGRD---LENTRLIDAVRLACSVDGIERVRLGS----LEPELLTGEDIQTLASLPK 230


>gi|167760764|ref|ZP_02432891.1| hypothetical protein CLOSCI_03149 [Clostridium scindens ATCC 35704]
 gi|167661651|gb|EDS05781.1| hypothetical protein CLOSCI_03149 [Clostridium scindens ATCC 35704]
          Length = 476

 Score = 39.3 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 80/222 (36%), Gaps = 62/222 (27%)

Query: 56  IARQFIPQKEE--LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
           I +   P  EE  L I  +  ED +G    +   G++  Y           C   C FCF
Sbjct: 59  IRK---PDGEEWLLEIDKDYDED-LGLEFDN---GLMSEYR---------TCSNKCIFCF 102

Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
             +M    + T+           Y ++      + F  G+ + L++ +++ +        
Sbjct: 103 IDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITLTNMKMEDI-------- 141

Query: 174 HVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
             +I++ H     +  Q  NPEL  + L           H      F+ E +  +  L  
Sbjct: 142 -QRIVKMHLAPINISIQSTNPELRCKML-----------H----NRFAGEKLQFLDVLYE 185

Query: 233 AGIILLSQSVLLKGINDDPE---ILANLMRTFVELR---IKP 268
             I +  Q V  K +ND PE    + +L R    +R   + P
Sbjct: 186 NHIEMNGQVVACKNVNDGPELERTIDDLSRYLPFMRSVSVVP 227


>gi|297584204|ref|YP_003699984.1| molybdenum cofactor biosynthesis protein A [Bacillus
           selenitireducens MLS10]
 gi|297142661|gb|ADH99418.1| molybdenum cofactor biosynthesis protein A [Bacillus
           selenitireducens MLS10]
          Length = 339

 Score = 39.3 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 7/85 (8%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F +      K  +LS ++       + +++ I ++  TGG+
Sbjct: 18  ISVTDKCNFRCSYCMPPEIFDKYFKFLPKDEILSFEEITRLSTIMVKEAGIRKLRVTGGE 77

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+     + K++  L  I+ V  +
Sbjct: 78  PLM--RHEVSKLIAMLNKIEGVDDI 100


>gi|91775006|ref|YP_544762.1| tRNA-i(6)A37 modification enzyme MiaB [Methylobacillus flagellatus
           KT]
 gi|122985599|sp|Q1H3L6|MIAB_METFK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|91708993|gb|ABE48921.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylobacillus
           flagellatus KT]
          Length = 442

 Score = 39.3 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 26/137 (18%)

Query: 91  HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           H  P R+      L ++  C  YC FC      G +         TEA       +  + 
Sbjct: 140 HLPPPRVEGAAAFLSIMEGCSKYCTFCVVPYTRGDEVSRPFDDILTEAIQ---LAEQGVK 196

Query: 146 EVIFTG----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
           E+   G           D  +     L  +++ L  I  ++ +R+ +      P  + P 
Sbjct: 197 EITLLGQNVNGYRSETADGEMAD---LALLIEYLAEIPEIERIRYTTSH----PNEMTPA 249

Query: 196 LIQCLKEAGKPVYIAIH 212
           LI C     K +   +H
Sbjct: 250 LIDCYARIPK-LVSHLH 265


>gi|49085554|gb|AAT51287.1| PA2956 [synthetic construct]
          Length = 299

 Score = 39.3 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 9/87 (10%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152
           ++L + + C    C FC     + +Q      ++D    L  I+   +   +  V    G
Sbjct: 24  LILPVTNGCSWNKCGFC----EMYTQPQKKFRARDENEVLEEIRRCGERLIVKRVFLADG 79

Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
           D L+L  +RL  VL+ +R  +  V+ +
Sbjct: 80  DALVLPTRRLLAVLQAIREHLPEVERV 106


>gi|255994803|ref|ZP_05427938.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Eubacterium saphenum ATCC
           49989]
 gi|255993516|gb|EEU03605.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Eubacterium saphenum ATCC
           49989]
          Length = 484

 Score = 39.3 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 16/143 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C  YC +C     V  Q  +       E A   +++     E++ TG +
Sbjct: 184 RKRAYIKIQDGCDRYCTYCIIAH-VRGQVRSKKVDDIYEEAKKLVED--GYREIVLTGIN 240

Query: 154 -PLILSH------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
             L          K +  V+  +  I     +R  S  P V    +N E I  +K   K 
Sbjct: 241 TALYGEDLHQGIGKSMVDVINKISTIPGDFRIRIGSLEPTV----VNKEYINLIKNLPK- 295

Query: 207 VYIAIHANHPYEFSEEAIAAISR 229
           +    H +     S + +AA+ R
Sbjct: 296 LCRHAHLS-VQSGSNDVLAAMGR 317


>gi|124005079|ref|ZP_01689921.1| molybdenum cofactor biosynthesis protein A [Microscilla marina ATCC
           23134]
 gi|123989331|gb|EAY28892.1| molybdenum cofactor biosynthesis protein A [Microscilla marina ATCC
           23134]
          Length = 334

 Score = 39.3 bits (91), Expect = 0.89,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 70/180 (38%), Gaps = 21/180 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C   E +    K  +LS ++ E  +  +     + ++  TGG+P + 
Sbjct: 20  LAVTDRCNLRCFYCMPEEGIKYLPKKHLLSYEEMERLVRLLASM-GVNKIRLTGGEPFLR 78

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQRINPEL------IQCLKEAGKPVY 208
               L   ++T+R I+ +  L   +   +     P  +   +      +  L +      
Sbjct: 79  KD--LINFMQTIRNIEGINELNITTNGVLTEQYIPAMVKMGISSVNLSLDTLDKERF--- 133

Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRTFVELRIK 267
             +      EF +  +  +  L  +GI      V++ G N +D   LA L RT   + ++
Sbjct: 134 --LKITRRNEFDK-VMRCLDALIESGIKTKINMVVMAGQNTEDIVPLAELTRT-HAIGVR 189


>gi|319646960|ref|ZP_08001188.1| hypothetical protein HMPREF1012_02225 [Bacillus sp. BT1B_CT2]
 gi|317391019|gb|EFV71818.1| hypothetical protein HMPREF1012_02225 [Bacillus sp. BT1B_CT2]
          Length = 373

 Score = 39.3 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 16/123 (13%)

Query: 58  RQFIPQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
            Q  P   E +      + D  GD   + ++                +C + C  C    
Sbjct: 5   MQVRPITPEYDPWEAYMDVDQFGDIQLTNVE-----------FTTTTLCNMRCEHCAVGY 53

Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
            + ++    L        L  I    ++  +  TGG+P +LS K +++ +  L    H +
Sbjct: 54  TLQTKDPDALPVSLLLKRLDEI---PRLRSLSITGGEP-MLSLKSVKEYVVPLLKYAHER 109

Query: 177 ILR 179
            +R
Sbjct: 110 GVR 112


>gi|304315571|ref|YP_003850716.1| radical SAM protein [Thermoanaerobacterium thermosaccharolyticum
           DSM 571]
 gi|302777073|gb|ADL67632.1| Radical SAM domain protein [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 378

 Score = 39.3 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA----YIQEKS--QIWEVI 148
           + I+ K+ + C + C++C+R+     +    LS +  E A      YI+  +  +    +
Sbjct: 13  NSIIFKVTNSCNLDCQYCYRK-KAKLENKQKLSLEILEKAFRDYSNYIEANNLDKTMNFV 71

Query: 149 FTGGDPLILSHKRLQKVLK 167
           + GG+PLI+      K++ 
Sbjct: 72  WHGGEPLIVDIDFYNKIIS 90


>gi|288869733|ref|ZP_05975994.2| arylsulfatase regulator [Methanobrevibacter smithii DSM 2374]
 gi|288861360|gb|EFC93658.1| arylsulfatase regulator [Methanobrevibacter smithii DSM 2374]
          Length = 376

 Score = 39.3 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 12/125 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPL 155
           +++     C   C++C+  E         +     +  + ++++ +       F GG+PL
Sbjct: 5   VMIIPTLGCQCNCKYCWGSESTKEMMDINV----IDDIITWLKDFRDDKVHFTFHGGEPL 60

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
           +  +    + L+ L  I +++     S    +    ++ ELI    +    V ++   + 
Sbjct: 61  LAGYDFYAEALEKLSKIDNLEGFSLQS---NIW--LLSDELIDLFLKY--NVAVSTSIDG 113

Query: 216 PYEFS 220
           P E +
Sbjct: 114 PEEIN 118


>gi|163757739|ref|ZP_02164828.1| RNA modification enzyme, MiaB family protein [Hoeflea phototrophica
           DFL-43]
 gi|162285241|gb|EDQ35523.1| RNA modification enzyme, MiaB family protein [Hoeflea phototrophica
           DFL-43]
          Length = 480

 Score = 39.3 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 22/131 (16%)

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQ 121
           E     E++ D + D +     G +        L +   C  +C FC     R   V   
Sbjct: 149 ETEFPTEDKFDRLPDASA----GTIRTRGVTAFLTVQEGCDKFCTFCVVPYTRGAEVSRP 204

Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP----LILSHKR---LQKVLKTLRYIKH 174
              ++S  +  AA         + EV   G +        S  R   L +++  L  I+ 
Sbjct: 205 VERIMSEAERLAAA-------GVREVTLLGQNVNAWHGQGSDGREWGLGELVHRLAAIEG 257

Query: 175 VQILRFHSRVP 185
           +  +R+ +  P
Sbjct: 258 IDRIRYTTSHP 268


>gi|187927999|ref|YP_001898486.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii
           12J]
 gi|187724889|gb|ACD26054.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii
           12J]
          Length = 373

 Score = 39.3 bits (91), Expect = 0.90,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 7/77 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +++            +LS ++ E       E   + ++  TGG+
Sbjct: 48  VSVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMARLFIEH-GVEKIRLTGGE 106

Query: 154 PLILSH-KRLQKVLKTL 169
           PL+    +RL ++L  L
Sbjct: 107 PLLRKDIERLVEMLARL 123


>gi|328871501|gb|EGG19871.1| molybdenum cofactor synthesis 1 [Dictyostelium fasciculatum]
          Length = 431

 Score = 39.3 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 74/168 (44%), Gaps = 20/168 (11%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R    + + L   C + C++C   E V  Q    +++ ++    L+ +   + + ++ FT
Sbjct: 109 RKHTYLRISLTERCNLRCQYCMPEEGVQLQPSENIMTDQEIIK-LSRLFVSAGVTKIRFT 167

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-I 209
           GG+PL+   K ++ +++ +  IK ++ +   +              ++ L++AG  +  I
Sbjct: 168 GGEPLV--RKNIESMIEEIGKIKGLETIAMTTNAIA------LGRKLERLQKAGLNLLNI 219

Query: 210 AIHANHPYEFS--------EEAIAAISRLANAGI-ILLSQSVLLKGIN 248
           ++      +F+        ++   +I +  + G   +    V++K IN
Sbjct: 220 SLDTLDANKFTIITRRLGWDKVKESIDKALSLGFNPVKINCVVMKNIN 267


>gi|319765567|ref|YP_004131068.1| YfkB-like domain-containing protein [Geobacillus sp. Y412MC52]
 gi|317110433|gb|ADU92925.1| YfkB-like domain-containing protein [Geobacillus sp. Y412MC52]
          Length = 374

 Score = 39.3 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                +C + C  C     +  +    L     +  L  ++E   +  +  TGG+P +LS
Sbjct: 35  FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 90

Query: 159 HKRLQKVLKTLRYIKHVQILR 179
            K +++ +  L    H + +R
Sbjct: 91  LKSVEQYVVPLLRYAHERGVR 111


>gi|323344658|ref|ZP_08084882.1| translation initiation factor IF-1 [Prevotella oralis ATCC 33269]
 gi|323093928|gb|EFZ36505.1| translation initiation factor IF-1 [Prevotella oralis ATCC 33269]
          Length = 72

 Score = 39.3 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ +E G +I+      ISG  +  YI  LPG   KV++  +++ K   G     
Sbjct: 22  FRVELENGVQII----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70


>gi|307243292|ref|ZP_07525459.1| MiaB-like protein [Peptostreptococcus stomatis DSM 17678]
 gi|306493310|gb|EFM65296.1| MiaB-like protein [Peptostreptococcus stomatis DSM 17678]
          Length = 431

 Score = 39.3 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 21/128 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  +K+   C  YC +C     +       + S+D ++ +  I+    +   EV+ TG
Sbjct: 141 KTRAFIKIQDGCDRYCSYC-----IIPYARGRIRSRDRQSIIEEIEKLAANGYKEVVLTG 195

Query: 152 GDPLILSHKRLQKVLKTLRYIKHV------QILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                   + L + +  L  IK V      + +R  S    V+P     + I  + +  K
Sbjct: 196 IHVASYG-RDLDEDIDILTVIKDVNKVEGIERIRLSS----VEPVLFTEDFIDQISKIDK 250

Query: 206 PVYIAIHA 213
              +  H 
Sbjct: 251 ---LVPHY 255


>gi|78042734|ref|YP_360230.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|123576193|sp|Q3ACA4|MIAB_CARHZ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|77994849|gb|ABB13748.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 440

 Score = 39.3 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 62/166 (37%), Gaps = 29/166 (17%)

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGI-VHRYPD-RILLKLLHVCPVYCRFCFRREMV 118
           +P+  E      ER   +  +    ++GI V R P  R  + +++ C  +C +C    + 
Sbjct: 113 LPKILERVFEKHERVLEVWQSEGQIVEGIPVKREPGVRAWVTIMYGCNNFCTYCIVPYVR 172

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-----------PLILSHKRLQKVLK 167
           G ++      +D    +  +       EV   G +           P+        ++L 
Sbjct: 173 GRERSR--KKEDILQEIRQLVA-EGYREVTLLGQNVNSYGKDLKGKPMF------AELLA 223

Query: 168 TLRYIKHVQILRFHSRVPIVDPQR-INPELIQCLKEAGKPVYIAIH 212
            +  I  +  +RF +  P     R +  ++I+ +  + K +   +H
Sbjct: 224 DIEKIDGLWRVRFTTSHP-----RDLTDDVIEVMASSRK-ICEHLH 263


>gi|32476670|ref|NP_869664.1| 2-methylthioadenine synthetase [Rhodopirellula baltica SH 1]
 gi|81659389|sp|Q7UK39|RIMO_RHOBA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|32447216|emb|CAD77042.1| conserved hypothetical protein-putative 2-methylthioadenine
           synthetase [Rhodopirellula baltica SH 1]
          Length = 477

 Score = 39.3 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 16/118 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDP 154
             LK+   C   C FC     +   +G   S    E  +   +    S + EV+    D 
Sbjct: 179 AYLKISEGCDRLCTFC----AIPKMRGKHFSKP-IEQIIDEAKRLGDSGVREVVIVAQDT 233

Query: 155 LILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                 R     L ++LK L  I+ +  +R         P  I+  LI  L  A + V
Sbjct: 234 TYYGMDRYGEPRLNQLLKELDKIESIDWIRL----MYFYPMYIDDALIDTLASARRIV 287


>gi|15598152|ref|NP_251646.1| hypothetical protein PA2956 [Pseudomonas aeruginosa PAO1]
 gi|116050958|ref|YP_790217.1| hypothetical protein PA14_25810 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|218890846|ref|YP_002439710.1| putative oxidase [Pseudomonas aeruginosa LESB58]
 gi|254235931|ref|ZP_04929254.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254241666|ref|ZP_04934988.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|296388552|ref|ZP_06878027.1| putative oxidase [Pseudomonas aeruginosa PAb1]
 gi|313108140|ref|ZP_07794275.1| putative oxidase [Pseudomonas aeruginosa 39016]
 gi|9949053|gb|AAG06344.1|AE004721_12 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|115586179|gb|ABJ12194.1| putative oxidase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126167862|gb|EAZ53373.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126195044|gb|EAZ59107.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218771069|emb|CAW26834.1| putative oxidase [Pseudomonas aeruginosa LESB58]
 gi|310880777|gb|EFQ39371.1| putative oxidase [Pseudomonas aeruginosa 39016]
          Length = 298

 Score = 39.3 bits (91), Expect = 0.91,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 9/87 (10%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152
           ++L + + C    C FC     + +Q      ++D    L  I+   +   +  V    G
Sbjct: 24  LILPVTNGCSWNKCGFC----EMYTQPQKKFRARDENEVLEEIRRCGERLIVKRVFLADG 79

Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178
           D L+L  +RL  VL+ +R  +  V+ +
Sbjct: 80  DALVLPTRRLLAVLQAIREHLPEVERV 106


>gi|302385460|ref|YP_003821282.1| molybdenum cofactor biosynthesis protein A [Clostridium
           saccharolyticum WM1]
 gi|302196088|gb|ADL03659.1| molybdenum cofactor biosynthesis protein A [Clostridium
           saccharolyticum WM1]
          Length = 322

 Score = 39.3 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E +V    G +L+  +          +  I +V  TGG+PL+ 
Sbjct: 14  ISVTDRCNLRCVYCMPEEGIVPMSHGDILTYHEILRICEA-GARLGIRKVKVTGGEPLVR 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182
               ++ ++K L+ I  ++ +   +
Sbjct: 73  KD--IEVLIKGLQSIPGIEDVTMTT 95


>gi|282881461|ref|ZP_06290135.1| MiaB-like protein [Prevotella timonensis CRIS 5C-B1]
 gi|281304687|gb|EFA96773.1| MiaB-like protein [Prevotella timonensis CRIS 5C-B1]
          Length = 455

 Score = 39.3 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  +C +C                  K  E A A         E++ TG
Sbjct: 163 RTRYFLKVQDGCNYFCTYCTIPFARGFSRNPSIDFLVKQAEQAAA-----EGGKEIVLTG 217

Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            +       +++    ++K L  ++ ++  R  S    ++P  I+ ELI     +     
Sbjct: 218 VNIGEFGESTNETFLDLVKALDQVQGIKRFRISS----LEPDLIDDELIDYCAHSR---A 270

Query: 209 IAIHA 213
              H 
Sbjct: 271 FMPHF 275


>gi|56418960|ref|YP_146278.1| hypothetical protein GK0425 [Geobacillus kaustophilus HTA426]
 gi|56378802|dbj|BAD74710.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 374

 Score = 39.3 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                +C + C  C     +  +    L     +  L  ++E   +  +  TGG+P +LS
Sbjct: 35  FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 90

Query: 159 HKRLQKVLKTLRYIKHVQILR 179
            K +++ +  L    H + +R
Sbjct: 91  LKSVEQYVVPLLRYAHERGVR 111


>gi|297531281|ref|YP_003672556.1| YfkB-like domain protein [Geobacillus sp. C56-T3]
 gi|297254533|gb|ADI27979.1| YfkB-like domain protein [Geobacillus sp. C56-T3]
          Length = 374

 Score = 39.3 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                +C + C  C     +  +    L     +  L  ++E   +  +  TGG+P +LS
Sbjct: 35  FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 90

Query: 159 HKRLQKVLKTLRYIKHVQILR 179
            K +++ +  L    H + +R
Sbjct: 91  LKSVEQYVVPLLRYAHERGVR 111


>gi|253699518|ref|YP_003020707.1| hopanoid biosynthesis associated radical SAM protein HpnH
           [Geobacter sp. M21]
 gi|251774368|gb|ACT16949.1| hopanoid biosynthesis associated radical SAM protein HpnH
           [Geobacter sp. M21]
          Length = 332

 Score = 39.3 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 7/87 (8%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           + +YP  ++L+  H+C + C  C R          ++S    +  L  + E      V  
Sbjct: 23  IEKYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMS---LKQCLDSVDECPAP-VVTI 78

Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHV 175
           TGG+P +     + ++++  L   KH+
Sbjct: 79  TGGEPFLYP--HIFQLIEKVLARGKHI 103


>gi|154174160|ref|YP_001409198.1| radical SAM family protein [Campylobacter curvus 525.92]
 gi|112803526|gb|EAU00870.1| radical SAM [Campylobacter curvus 525.92]
          Length = 417

 Score = 39.3 bits (91), Expect = 0.92,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 6/111 (5%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           D   + L   C   C FCF       +K         + A   ++    +  V  TGG+P
Sbjct: 67  DTHSVYLSLKCNKNCYFCFNPNQDDFKKDVKRKFAAKQIANKILKNNQNVKFVALTGGEP 126

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           L+     L+        I +      H R    +   I+ + ++ LK +G 
Sbjct: 127 LLYKDDALE-----FFKIINESNTTIHKR-LYTNGTLIDTKYLKKLKSSGL 171


>gi|330503007|ref|YP_004379876.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
 gi|328917293|gb|AEB58124.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01]
          Length = 460

 Score = 39.3 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 22/196 (11%)

Query: 44  ANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103
           A+LI  ++   P      P   + +       D +     S       R   R L   +H
Sbjct: 9   ADLIRRYDLAGP-RYTSYPTAVQFHDAIG-PFDLLHALRDS-------RKAGRPLSLYVH 59

Query: 104 V--CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +  C   C +C   +++   +G  L       ++ E    YI +   I ++ F GG P  
Sbjct: 60  IPFCAHICYYCACNKVITKDRGRALPYLEKLEREIEIVSRYIDKNQPIEQLHFGGGTPTF 119

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANH 215
           LSH  L+++++ LR   ++           +DP+  +   +  L+E G   V + +    
Sbjct: 120 LSHDELRRLMQHLRQHFNLLDDDSGDYSIEIDPREADWSTMGLLRELGFNRVSLGV---- 175

Query: 216 PYEFSEEAIAAISRLA 231
             +   E   A++RL 
Sbjct: 176 -QDLDPEVQRAVNRLQ 190


>gi|258513433|ref|YP_003189655.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257777138|gb|ACV61032.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 452

 Score = 39.3 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRRE-MVGSQKGTVL---S 127
             EDP+ +N++ P +G+V     + L L L H C + CR+CF  +   G     +     
Sbjct: 73  FSEDPLQNNDYLPGEGVV-----KALCLHLAHDCNMRCRYCFAGQGKFGGSSDLMPLNVG 127

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166
            K  E  +     +  I EV F GG+PL ++ K LQ ++
Sbjct: 128 KKAMEFLIKSSGSRRNI-EVDFFGGEPL-MNFKVLQDLV 164


>gi|169828828|ref|YP_001698986.1| hypothetical protein Bsph_3362 [Lysinibacillus sphaericus C3-41]
 gi|168993316|gb|ACA40856.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 370

 Score = 39.3 bits (91), Expect = 0.93,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                +C + C  C     + ++    L     +  L  + E   +  +  TGG+P ++S
Sbjct: 33  FTTTTLCNMRCAHCAVGYTLQNKDPEALP---IDLILQRLDEIPHLKTLSITGGEP-MMS 88

Query: 159 HKRLQKVLKTLRYIKHVQILR 179
            K +Q  +  L    H + +R
Sbjct: 89  KKSVQSYVLPLLKYAHERGVR 109


>gi|327480469|gb|AEA83779.1| molybdenum cofactor biosynthesis protein A [Pseudomonas stutzeri
           DSM 4166]
          Length = 331

 Score = 39.3 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 29/167 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C   C +C   +MV + +  +L+ ++  A          +  +  TGG+PL+  
Sbjct: 19  LSVTDRCDFRCTYCMSEDMVFAPRAQILTLEELYAVADAFIS-LGVKRIRVTGGEPLV-- 75

Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
            K L  +L  L     ++ L      S++P          L   L+EAG    + I  + 
Sbjct: 76  RKGLTGLLARLGARNELEDLAITTNGSQLP---------SLAASLREAGVR-RLNISLDS 125

Query: 216 PY-----EFS-----EEAIAAISRLANAGI--ILLSQSVLLKGINDD 250
                  E +     ++ +  I    +AG   I L+ SV+ KG NDD
Sbjct: 126 LKRERFAELTRRDRLDQVLEGIEAARSAGFKRIKLN-SVVQKGRNDD 171


>gi|295400597|ref|ZP_06810575.1| YfkB-like domain protein [Geobacillus thermoglucosidasius C56-YS93]
 gi|294977500|gb|EFG53100.1| YfkB-like domain protein [Geobacillus thermoglucosidasius C56-YS93]
          Length = 374

 Score = 39.3 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 16/119 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                +C + C  C     + ++    L     +  +  ++E   +  +  TGG+P +LS
Sbjct: 35  FTTTTLCNMRCEHCAVGYTLQTKDPEALP---LDLLIKRLEEIPHLRSLSITGGEP-MLS 90

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
            K +   +  L    H + +R           ++N  L   L    K  P    +H +H
Sbjct: 91  LKSVDNYVVPLLKYAHERGVR----------TQLNSNLTLELDRYEKVIPYLDVLHISH 139


>gi|225374900|ref|ZP_03752121.1| hypothetical protein ROSEINA2194_00523 [Roseburia inulinivorans DSM
           16841]
 gi|225213283|gb|EEG95637.1| hypothetical protein ROSEINA2194_00523 [Roseburia inulinivorans DSM
           16841]
          Length = 480

 Score = 39.3 bits (91), Expect = 0.94,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 58/134 (43%), Gaps = 23/134 (17%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +  +Y  +  + ++  C  +C +C    + G ++      K+    + ++ +   + EV+
Sbjct: 183 VERKYSFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--KEIVREIEHLVQD-GVVEVM 239

Query: 149 FTGGD----------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
             G +          P+        ++L+ +  I+ ++ +RF +      P+ ++ ELI+
Sbjct: 240 LLGQNVNSYGRNLEHPMTF-----AQLLQEIEKIEGLERIRFMTSH----PKDLSDELIE 290

Query: 199 CLKEAGKPVYIAIH 212
            +K + K +   +H
Sbjct: 291 VMKNS-KKICNHLH 303


>gi|317473569|ref|ZP_07932859.1| radical SAM domain-containing protein [Anaerostipes sp. 3_2_56FAA]
 gi|316898971|gb|EFV20995.1| radical SAM domain-containing protein [Anaerostipes sp. 3_2_56FAA]
          Length = 171

 Score = 39.3 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 13/146 (8%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVY-CRFC-FRREMVGSQKGTVL 126
           E + +   +      +G+V+R P      ++++   C    C FC   +E     +    
Sbjct: 12  ENKTESYQEERQMEYEGMVYRPPSEAYSLIIQVTIGCSQNDCIFCNMYKEKRFRMRPLQD 71

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILR-FHSRV 184
              D   A  Y    + I ++    GD LI  ++ L ++LK +R  I   + +  + S  
Sbjct: 72  VLADFREAREY---YNSIGKIFLADGDALICKNEYLNEILKYIREEIPECRQVTCYASPK 128

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIA 210
            ++       E ++ L+E G  +   
Sbjct: 129 SVMIK---TKEELRELRENGLDMVYM 151


>gi|228985631|ref|ZP_04145784.1| antilisterial bacteriocin (subtilosin) production [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
 gi|228774026|gb|EEM22439.1| antilisterial bacteriocin (subtilosin) production [Bacillus
           thuringiensis serovar tochigiensis BGSC 4Y1]
          Length = 86

 Score = 39.3 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 79  GDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
            +  + P+  I  +  YP    +++ + C V CR C+     G+ K  V+S    ++ L 
Sbjct: 7   EEPINVPVNLIEEQTIYPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSLDQIKSLLD 64

Query: 137 YIQEKSQIWEVIFTGGD 153
            +     +  +  TGGD
Sbjct: 65  DL-NHIGVKLIELTGGD 80


>gi|221111831|ref|XP_002167227.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
          Length = 802

 Score = 39.3 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 72/172 (41%), Gaps = 24/172 (13%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R  + + + L   C + C +C   E V  + K  +L++++    LA +     + ++  T
Sbjct: 104 RKHNYLRISLTERCNLRCGYCMPEEGVLLTNKDDLLTNEEMIR-LARLFVFEGVNKIRLT 162

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PV 207
           GG+PL+     + ++   L  +K ++ L   +   +        + +  LK+AG     +
Sbjct: 163 GGEPLVRKD--IVQICDQLSSLKGLKTLAITTNGLVA------EQKLLYLKQAGLTNVNI 214

Query: 208 YIAIHANHPYEFS------EEAIAAISR---LANAGIILLSQSVLLKGINDD 250
            +       +EF        +   AI +   L    + +    V++KG+NDD
Sbjct: 215 SLDTMIEKKFEFISRRKGLTKVFNAIEKAIELKFNSVKINC--VVMKGLNDD 264


>gi|186475181|ref|YP_001856651.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia
           phymatum STM815]
 gi|229890465|sp|B2JD88|MIAB_BURP8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|184191640|gb|ACC69605.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phymatum
           STM815]
          Length = 456

 Score = 39.3 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD- 153
             + ++  C  YC +C     V         S+  +  L  I       + EV   G + 
Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNV 203

Query: 154 -----PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                 + L    +     +++ +  I  ++ +R+ +      P+     LI    +  K
Sbjct: 204 NAYRGAMTLGATEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQRLIDTYAKVPK 259

Query: 206 PVYIAIH 212
            +   +H
Sbjct: 260 -LVSHLH 265


>gi|78045218|ref|YP_360312.1| radical SAM protein [Carboxydothermus hydrogenoformans Z-2901]
 gi|123770585|sp|Q3AC22|RLMN_CARHZ RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|77997333|gb|ABB16232.1| radical SAM enzyme, Cfr family [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 342

 Score = 39.3 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 50/246 (20%), Positives = 87/246 (35%), Gaps = 44/246 (17%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEV 147
           + +RY + + L     C + C+FC     +G     + + +  E  L      S+ I  V
Sbjct: 95  LKYRYGNTVCLSTQVGCKMGCKFCATG--LGGFSRNLTAGEMIEQILVLKASSSEKITRV 152

Query: 148 IFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD-----PQRINPELIQCLK 201
           +  G G+PL        +VLK +R I     L    R   V      PQ      I+ L 
Sbjct: 153 VLMGSGEPL----DNFTEVLKFMRKINEKDCLNISYRKITVSTCGMVPQ------IKALA 202

Query: 202 EAGKPVYIAIHANHP-----YEFSEEAIA-AISRLANAGIILLSQS--------VLLKGI 247
           E   PV +AI  + P      E         ++ L +A    + ++         L++ +
Sbjct: 203 EEKLPVTLAISLHAPDDALRNELIPINKRWGLAELLDAAWYFIDKTGRRVSFEYALIENV 262

Query: 248 NDDPE----ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
           ND  E    +   L R  V + + PY            +F+    E       + ++ +G
Sbjct: 263 NDTVEHALKLAQLLQRKLVHVNLIPY------NTIEKRNFKTPSVEKINKFKEVLKR-AG 315

Query: 304 LCQPFY 309
           +     
Sbjct: 316 IPVTVR 321


>gi|89100455|ref|ZP_01173317.1| hypothetical protein B14911_05476 [Bacillus sp. NRRL B-14911]
 gi|89084798|gb|EAR63937.1| hypothetical protein B14911_05476 [Bacillus sp. NRRL B-14911]
          Length = 450

 Score = 39.3 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     ++ S+D +  +   Q+   +   E++ T 
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEVIRQAQQLVDAGYKEIVLTG 196

Query: 151 ------GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   +    L  +L+ L   +K ++ LR  S    ++  +I  E+I+ + ++
Sbjct: 197 IHTGGYGED---MKDYNLAMLLRDLEAQVKGLKRLRISS----IEASQITDEVIEVMDKS 249

Query: 204 GKPVYIAIHA 213
              V   +H 
Sbjct: 250 EV-VVRHLHI 258


>gi|315608941|ref|ZP_07883913.1| arylsulfatase-activating protein AtsB [Prevotella buccae ATCC
           33574]
 gi|315249321|gb|EFU29338.1| arylsulfatase-activating protein AtsB [Prevotella buccae ATCC
           33574]
          Length = 390

 Score = 39.3 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 47/177 (26%)

Query: 101 LLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFT--GGDP 154
           +   C + C++C+   +  +  +    V+S +  E     YIQ ++ + +V+FT  GG+P
Sbjct: 1   MGASCNLRCKYCYYLEKSHLYRNAPARVMSDELLERFVQEYIQAQT-MSQVLFTWHGGEP 59

Query: 155 LILSHKRLQKVLKTL---------RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           L+   + L    K +         R I +       +   +     +  E  +  KE   
Sbjct: 60  LM---RPLSFYRKAVALQEKYAFGRQIDN----TIQTNGTL-----LTDEWCEFFKEHNW 107

Query: 206 PVYIAIHANHPYEFSEE-------------AIAAISRLANAGIILLSQSVLLKGIND 249
            V I+   + P EF +E              +  I  L   G+   + +V    +ND
Sbjct: 108 LVGIS--IDGPQEFHDEYRRTASDKPSWQKVMRGIRLLRKHGVEWNAMAV----VND 158


>gi|306820795|ref|ZP_07454420.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
 gi|304551185|gb|EFM39151.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae
           ATCC 43715]
          Length = 457

 Score = 39.3 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C +CF  +        ++S +  + AL Y+ E S      EV F GG+PL
Sbjct: 99  LHVAHDCNLRCSYCFASQGDFGGDKEIMSLEVGKKALDYLVEHSGNRRNLEVDFFGGEPL 158

Query: 156 I 156
           +
Sbjct: 159 M 159


>gi|319762446|ref|YP_004126383.1| molybdenum cofactor biosynthesis protein a [Alicycliphilus
           denitrificans BC]
 gi|330825703|ref|YP_004389006.1| molybdenum cofactor biosynthesis protein A [Alicycliphilus
           denitrificans K601]
 gi|317117007|gb|ADU99495.1| molybdenum cofactor biosynthesis protein A [Alicycliphilus
           denitrificans BC]
 gi|329311075|gb|AEB85490.1| molybdenum cofactor biosynthesis protein A [Alicycliphilus
           denitrificans K601]
          Length = 389

 Score = 39.3 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 14/92 (15%)

Query: 92  RYPDRIL------LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQE 140
            Y  R        + +   C   C +C     F +         +LS ++          
Sbjct: 41  LYDTRARPLRDLRISVTDRCNFRCSYCMPKEVFDKHYRYLPHSDLLSFEEITRLARLFMA 100

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
              + ++  TGG+PL+     L+ +++ L  +
Sbjct: 101 H-GVHKIRLTGGEPLLRKD--LELLVEQLAGL 129


>gi|289667851|ref|ZP_06488926.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
           pv. musacearum NCPPB4381]
          Length = 343

 Score = 39.3 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 62/187 (33%), Gaps = 32/187 (17%)

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125
           LP+    P+ D    PL+ +         L ++  C   C +C   + V    G      
Sbjct: 6   LPDLLTAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGFDSQQR 57

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS--- 182
           LS    E  +        + +V  TGG+PL+     L  ++  L  I+ ++ L   +   
Sbjct: 58  LSFDQLETLVRAFVS-VGVTKVRLTGGEPLLRRD--LPSLIARLGAIEGIEDLALTTNGT 114

Query: 183 ---RVPIVDPQ----RIN-------PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
              R  +   Q    RI        P L + +      +   +      E +      I+
Sbjct: 115 LLARQAVALRQAGLRRITVSMDALEPALFRRMSGDRGEIAQVLAGIAAAELAGFQRLKIN 174

Query: 229 RLANAGI 235
            +   GI
Sbjct: 175 CVVQRGI 181


>gi|265750577|ref|ZP_06086640.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|263237473|gb|EEZ22923.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 368

 Score = 39.3 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 32/165 (19%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
             R P     +L   C + C  CF R    V  + G +   +        +Q+   ++ +
Sbjct: 20  QSRVPITTNFELTPTCTLNCDMCFIRTERSVVERHGGLSPLQQWLDWAEQLQDMGTLF-I 78

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI---------------KHVQILRFHSRVPIVDPQRI 192
           + TGG+P++      +++   LR +               + V+IL+ H       P+RI
Sbjct: 79  LLTGGEPMLYP--HFKELYTRLREMGFILTLNTNGTLIDNEMVRILQIH------KPRRI 130

Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           N  L    +E    +       H  +     + A+ RL  A I +
Sbjct: 131 NVTLYGDSRETYGRL------CHNPQGYTLCMEALKRLKKADIDV 169


>gi|118582017|ref|YP_903267.1| radical SAM domain-containing protein [Pelobacter propionicus DSM
           2379]
 gi|118504727|gb|ABL01210.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379]
          Length = 357

 Score = 39.3 bits (91), Expect = 0.95,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 49/164 (29%)

Query: 86  LKGIVHRYP--DRILLKL------LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137
             GI  RY   +R+   +       ++C   C FC       ++   VL+  +    +  
Sbjct: 37  ADGIRRRYHPENRVTFVVDRNVNYTNICESRCSFCAFYRDAAAKDAYVLTPDEIFTKITE 96

Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
           + E      ++  G +P  L+    +++ +              +R P V          
Sbjct: 97  LVELEGTQLLMQGGLNP-SLTIDYFEELFRE-----------IGTRFPSV---------- 134

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAI-------AAISRLANAG 234
                         H+  P E +  A         A+ RL  AG
Sbjct: 135 ------------QNHSLSPAEITCIARVSGLTIDTALERLHRAG 166


>gi|257439153|ref|ZP_05614908.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Faecalibacterium
           prausnitzii A2-165]
 gi|257198404|gb|EEU96688.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Faecalibacterium
           prausnitzii A2-165]
          Length = 409

 Score = 39.3 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 18/119 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  +K+   C   C +C      G  +    +       L  +   S   EV+ +   
Sbjct: 119 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--AEDSILKELRQLAA-SGYREVVLSAIS 175

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D        L ++++    ++ ++ +R  S    +DP  + PE I  L    K
Sbjct: 176 LPSYGLDTGT----NLVELVEKCAQVEGIERIRLGS----LDPDMLTPEFITRLAAVEK 226


>gi|312112313|ref|YP_003990629.1| YfkB-like domain-containing protein [Geobacillus sp. Y4.1MC1]
 gi|311217414|gb|ADP76018.1| YfkB-like domain-containing protein [Geobacillus sp. Y4.1MC1]
          Length = 374

 Score = 39.3 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 16/119 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                +C + C  C     + ++    L     +  +  ++E   +  +  TGG+P +LS
Sbjct: 35  FTTTTLCNMRCEHCAVGYTLQTKDPEALP---LDLLIKRLEEIPHLRSLSITGGEP-MLS 90

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
            K +   +  L    H + +R           ++N  L   L    K  P    +H +H
Sbjct: 91  LKSVDNYVVPLLKYAHERGVR----------TQLNSNLTLELDRYEKVIPYLDVLHISH 139


>gi|226334870|ref|YP_002784542.1| putative molybdenum cofactor biosynthesis protein [Rhodococcus
           opacus B4]
 gi|226246090|dbj|BAH56190.1| putative molybdenum cofactor biosynthesis protein [Rhodococcus
           opacus B4]
          Length = 305

 Score = 39.3 bits (91), Expect = 0.97,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 7/113 (6%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            R+ + L   C + C +C      G  KG+   S     A   +  + ++ +VI +GG+P
Sbjct: 6   GRLRVFLTEQCNLACFYC---HNEGQPKGSAYLSDQLFDAAVSMSRQPEVEKVILSGGEP 62

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           L+    R+ ++++ +    +V      +   ++ P          L +    V
Sbjct: 63  LLHP--RVLELVEAVS--PNVARSSLITNGLLLTPSLARDLAFAGLSKIRLGV 111


>gi|311032494|ref|ZP_07710584.1| coproporphyrinogen III oxidase [Bacillus sp. m3-13]
          Length = 495

 Score = 39.3 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 15/161 (9%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDT 131
           I D     +  +     +  +   +  CP  C +C F    +  ++G V S       + 
Sbjct: 150 IVDRQLDVVPDLHDLGEEVSIYIGIPFCPTKCAYCTFPAYAINGKQGKVDSFLGGLHHEI 209

Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189
           +A  A+++EK  +I  V + GG P  ++ + +  + + +      ++ +R  + V    P
Sbjct: 210 DAIGAWLKEKGIKITTVYYGGGTPTSITAEEMDMLYEQMYASFPDMEKVREVT-VEAGRP 268

Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
             I PE +  LK+     + I      P  +++E + AI R
Sbjct: 269 DTITPEKLDVLKKWNIDRISIN-----PQSYTQETLKAIGR 304


>gi|217967463|ref|YP_002352969.1| RNA modification enzyme, MiaB family [Dictyoglomus turgidum DSM
           6724]
 gi|217336562|gb|ACK42355.1| RNA modification enzyme, MiaB family [Dictyoglomus turgidum DSM
           6724]
          Length = 441

 Score = 39.3 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 14/88 (15%), Positives = 33/88 (37%), Gaps = 11/88 (12%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GGDPLIL 157
            C  +C +C    + G +K      ++    + ++  +  +   +        G D   L
Sbjct: 155 GCNNFCTYCIVPYLRGKEKSR--DPQEIIKEIEHLANQGVVEVTLLGQNVDSYGKD---L 209

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            +  L  +L  +  I  ++ +RF +  P
Sbjct: 210 GNVDLADLLVEIHKIPGIKRIRFLTSHP 237


>gi|212695675|ref|ZP_03303803.1| hypothetical protein ANHYDRO_00192 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212677348|gb|EEB36955.1| hypothetical protein ANHYDRO_00192 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 358

 Score = 39.3 bits (91), Expect = 0.98,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 29/162 (17%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQIWEVIFTGGDP 154
           +      CP  C FC +   + + K ++      K  +  L+Y        E+ F GG  
Sbjct: 10  IFIPFLGCPHDCAFCNQV-KITNYKDSINKENTIKQIDQYLSYFPNNDNPKEIAFFGG-S 67

Query: 155 LI-LSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
              L    +   L+     K    +  +R  +R     P  IN  ++  LK+    V   
Sbjct: 68  FTGLETDVMISYLEIALAYKKKGIIDRIRLSTR-----PDYINNSILDILKKYEVDVIEL 122

Query: 209 -------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQ 240
                    ++AN   H  E   ++I A   +   G  L  Q
Sbjct: 123 GIQSLDNEILNANERGHSRE---DSIKASKLIKEYGFKLGHQ 161


>gi|329962041|ref|ZP_08300052.1| 23S rRNA m2A2503 methyltransferase [Bacteroides fluxus YIT 12057]
 gi|328530689|gb|EGF57547.1| 23S rRNA m2A2503 methyltransferase [Bacteroides fluxus YIT 12057]
          Length = 346

 Score = 39.3 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 50/202 (24%)

Query: 95  DRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG 151
           DR  L +     C + C+FC    M G Q  T  L++      ++ + E+ ++  V+  G
Sbjct: 100 DRATLCVSSQVGCKMNCKFC----MTGKQGFTANLTANQIINQISSLPERDKLTNVVMMG 155

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEA 203
            G+PL      L +VLK L  +         S      P+RI          L + ++E+
Sbjct: 156 MGEPL----DNLDEVLKALEIMT-------ASYGYSWSPKRITLSSVGLRKGLQRFIEES 204

Query: 204 GKPVYIAIHANHP---YEFSEEAIA-AISRLANAGIILLS-----Q-------SVLLKGI 247
              + +++H   P    E      A +I+ +     +L +     Q        V  KG+
Sbjct: 205 DCHLAVSLHTPVPLQRRELMPAEKAFSITEIVE---LLRNYDFSKQRRLSFEYIVF-KGV 260

Query: 248 NDD---PEILANLMRTFVELRI 266
           ND     + L  L+R   + RI
Sbjct: 261 NDSLLYAKELLKLLRGL-DCRI 281


>gi|303239989|ref|ZP_07326511.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
 gi|302592468|gb|EFL62194.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2]
          Length = 393

 Score = 39.3 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 8/81 (9%)

Query: 94  PDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           P+ + LKL + C + C+ CF+                L   D +     + E  +I   +
Sbjct: 42  PESVGLKLTNRCNLRCKHCFQWNESGYHRFMDHDCQSLDM-DIDLFNKILVETQEIKSRL 100

Query: 149 -FTGGDPLILSH-KRLQKVLK 167
              GG+PL  S   R+  +L+
Sbjct: 101 YLWGGEPLYHSDFDRIAGLLE 121


>gi|269127512|ref|YP_003300882.1| MiaB-like tRNA modifying enzyme YliG [Thermomonospora curvata DSM
           43183]
 gi|268312470|gb|ACY98844.1| MiaB-like tRNA modifying enzyme YliG [Thermomonospora curvata DSM
           43183]
          Length = 484

 Score = 39.3 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 49/145 (33%), Gaps = 32/145 (22%)

Query: 99  LKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT---- 150
           LKL   C   C FC    FR   V      VL+     A       +  + EV+      
Sbjct: 179 LKLASGCDRRCTFCAIPAFRGAYVSRDPQEVLAEAAWLA-------ERGVREVVLVSENS 231

Query: 151 ---GGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVD-PQRINPELIQCL-KEAG 204
              G D   L   + L+K+L  L  I  ++ +R          P  + P LI+ L    G
Sbjct: 232 TSYGKD---LGDLRALEKLLPQLAAIDGIERVR-----LSYLQPAELRPGLIEVLCTTPG 283

Query: 205 KPVYIAIHANHPYEFSEEAIAAISR 229
              Y  +   H    S   +  + R
Sbjct: 284 VAPYFDLSFQHA---SGPVLRRMRR 305


>gi|229918072|ref|YP_002886718.1| pyruvate formate-lyase activating enzyme [Exiguobacterium sp. AT1b]
 gi|229469501|gb|ACQ71273.1| pyruvate formate-lyase activating enzyme [Exiguobacterium sp. AT1b]
          Length = 238

 Score = 39.3 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 58/141 (41%), Gaps = 23/141 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAY---IQEKSQIWEVIF 149
           P    +  L  C + C +C   +    +K    S++D  + AL+Y   ++       +  
Sbjct: 18  PGIRFIVFLQGCALRCLYCHNADTWDFKKNNHRSAEDVIQEALSYRPFMEASKG--GITI 75

Query: 150 TGGDPLILSHKRLQKVLKTLRYI--------------KHVQILRFHSRVPIVDPQRINPE 195
           +GGDPL    + L+ +L+  +                 ++  +  H+ + ++D + I+ +
Sbjct: 76  SGGDPL-AQPEFLEALLREAKKHGLHTTLDTSGALRPPNLDAILDHTDLVLLDIKHIDDD 134

Query: 196 LIQCL--KEAGKPVYIAIHAN 214
           + + L  +     + +A H +
Sbjct: 135 MCKKLTGRSNANTLALAEHLS 155


>gi|188582019|ref|YP_001925464.1| molybdenum cofactor biosynthesis protein A [Methylobacterium populi
           BJ001]
 gi|179345517|gb|ACB80929.1| molybdenum cofactor biosynthesis protein A [Methylobacterium populi
           BJ001]
          Length = 344

 Score = 39.3 bits (91), Expect = 0.99,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 33/170 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C   +M    K  +L+ ++ +           + ++  TGG+PL+  
Sbjct: 30  ISVTDRCDFRCAYCMAEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRR 88

Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
                 +RL + LK+   +  + +    S++      R  PEL   L      V +    
Sbjct: 89  DIMHLFRRLSRHLKS-GALDELTLTTNGSQL-----ARFAPELAD-LGVRRINVSLDT-- 139

Query: 214 NHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKGINDD 250
                   E   AI+R               +AGI +   +V LKG+N+D
Sbjct: 140 -----LDAEKFRAITRRGDLSVVLAGIEAARSAGIKVKINAVALKGVNED 184


>gi|284045650|ref|YP_003395990.1| molybdenum cofactor biosynthesis protein A [Conexibacter woesei DSM
           14684]
 gi|283949871|gb|ADB52615.1| molybdenum cofactor biosynthesis protein A [Conexibacter woesei DSM
           14684]
          Length = 330

 Score = 39.3 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 38/87 (43%), Gaps = 4/87 (4%)

Query: 97  ILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           + + +   C   C++C   + +   ++  +L+ ++    +  +     + +V  TGG+PL
Sbjct: 16  VRISVTDRCNFRCQYCMPADGLPWLEREEILTFEEIARLVGLLASM-GVHDVRLTGGEPL 74

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHS 182
           +       ++++ L  I  V  L   +
Sbjct: 75  VRRD--FPRLVEMLAAIPAVHDLSITT 99


>gi|262383650|ref|ZP_06076786.1| radical SAM superfamily protein [Bacteroides sp. 2_1_33B]
 gi|262294548|gb|EEY82480.1| radical SAM superfamily protein [Bacteroides sp. 2_1_33B]
          Length = 416

 Score = 39.3 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 11/84 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-----SQIWEVIFTGGD 153
             +   C + C++C+   +VG      +S +    A+ YI E       +     F GG+
Sbjct: 25  FIVTKDCQLACKYCY---LVGKNTNERMSWEIARKAIDYILEHENDMPEESVTWDFIGGE 81

Query: 154 PLI---LSHKRLQKVLKTLRYIKH 174
           P +   L  +    +   +    H
Sbjct: 82  PFLEIDLIDRICDYIKTEMYRRNH 105


>gi|224025812|ref|ZP_03644178.1| hypothetical protein BACCOPRO_02554 [Bacteroides coprophilus DSM
           18228]
 gi|224019048|gb|EEF77046.1| hypothetical protein BACCOPRO_02554 [Bacteroides coprophilus DSM
           18228]
          Length = 163

 Score = 39.3 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            C   C  C   E    Q G  L+ +  E  +  I     +  + F+GGDP     + L
Sbjct: 26  GCHHRCPGCHNPESWNPQAGKPLTPEVLEDIIQSINSNPLLDGITFSGGDPFFNPKEFL 84


>gi|212691074|ref|ZP_03299202.1| hypothetical protein BACDOR_00564 [Bacteroides dorei DSM 17855]
 gi|237712425|ref|ZP_04542906.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237726616|ref|ZP_04557097.1| conserved hypothetical protein [Bacteroides sp. D4]
 gi|265752128|ref|ZP_06087921.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 3_1_33FAA]
 gi|212666306|gb|EEB26878.1| hypothetical protein BACDOR_00564 [Bacteroides dorei DSM 17855]
 gi|229435142|gb|EEO45219.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
 gi|229453746|gb|EEO59467.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263236920|gb|EEZ22390.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 3_1_33FAA]
          Length = 438

 Score = 39.3 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C        +       +  E A           E++ TG  
Sbjct: 148 RTRYFLKVQDGCDYFCSYCTI-PFARGRSRNGRIEEIVEQARQ--AAAEGGKEIVITGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  +  ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVAGIERYRISS----IEPNLLTDEIIEYVSRSR---AFM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|170693394|ref|ZP_02884553.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia graminis
           C4D1M]
 gi|170141549|gb|EDT09718.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia graminis
           C4D1M]
          Length = 461

 Score = 39.3 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 26/138 (18%)

Query: 91  HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
           H  P R+      + ++  C  YC +C     V         S+  +  L  I       
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192

Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           + EV   G +       L +    +     +++ +  I  ++ +R+ +      P+    
Sbjct: 193 VREVTLLGQNVNAYRGALTVGSSEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248

Query: 195 ELIQCLKEAGKPVYIAIH 212
            LI    +  K +   +H
Sbjct: 249 RLIDTYAKVPK-LVSHLH 265


>gi|188585813|ref|YP_001917358.1| RNA modification enzyme, MiaB family [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350500|gb|ACB84770.1| RNA modification enzyme, MiaB family [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 446

 Score = 39.3 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 56/144 (38%), Gaps = 17/144 (11%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           P G+  +  +K        R  LK+   C  +C +C     +       L S+  E  ++
Sbjct: 137 PKGEFENLKIKNFKKHDRTRHFLKIQEGCDQFCSYC-----IIPYARGHLRSRPPEDVIS 191

Query: 137 YIQE--KSQIWEVIFTGGD--PLILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDP 189
            I++   +   E++ TG +       +  L  +   L  I H++    +R  S     +P
Sbjct: 192 EIKQAVSNGFKEIVLTGINLGAYGRENSNLPNLATLLDKIIHLKGDYRIRLSS----CEP 247

Query: 190 QRINPELIQCLKEAGKPVYIAIHA 213
           Q I   L++ +  + K +   +H 
Sbjct: 248 QEITIGLLELVTNSEK-ICKHLHI 270


>gi|150002616|ref|YP_001297360.1| putative Fe-S oxidoreductase [Bacteroides vulgatus ATCC 8482]
 gi|254881421|ref|ZP_05254131.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294777900|ref|ZP_06743343.1| MiaB-like protein [Bacteroides vulgatus PC510]
 gi|319642808|ref|ZP_07997446.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_40A]
 gi|149931040|gb|ABR37738.1| putative Fe-S oxidoreductase [Bacteroides vulgatus ATCC 8482]
 gi|254834214|gb|EET14523.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
 gi|294448253|gb|EFG16810.1| MiaB-like protein [Bacteroides vulgatus PC510]
 gi|317385552|gb|EFV66493.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_40A]
          Length = 438

 Score = 39.3 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C        +       +  E A           E++ TG  
Sbjct: 148 RTRYFLKVQDGCDYFCSYCTI-PFARGRSRNGRIEEIVEQARQ--AAAEGGKEIVITGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  +  ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVAGIERYRISS----IEPNLLTDEIIEYVSRSR---AFM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|34499604|ref|NP_903819.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Chromobacterium violaceum ATCC 12472]
 gi|81654199|sp|Q7NQI8|MIAB_CHRVO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|34105455|gb|AAQ61810.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 444

 Score = 39.3 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 14/107 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154
             + ++  C  YC FC     V         S+  E  L  I       + E+   G + 
Sbjct: 148 AFVSIMEGCSKYCSFC-----VVPYTRGEEVSRPFEDVLTEIAGLAAQGVKEITLLGQNV 202

Query: 155 ----LILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
                ++S   +     +L+ +  +  V+ +RF +  P    QRI  
Sbjct: 203 NAYRGLMSDGEIADFALLLEYVHEVPGVERIRFTTSHPREFSQRIID 249


>gi|152979335|ref|YP_001344964.1| molybdenum cofactor biosynthesis protein A [Actinobacillus
           succinogenes 130Z]
 gi|171704353|sp|A6VPY2|MOAA_ACTSZ RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|150841058|gb|ABR75029.1| molybdenum cofactor biosynthesis protein A [Actinobacillus
           succinogenes 130Z]
          Length = 336

 Score = 39.3 bits (91), Expect = 1.00,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 22/162 (13%)

Query: 99  LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +  VC   C +C         ++   L+  +   A++         +V  TGG+P  L
Sbjct: 26  LSITDVCNFRCNYCLPDGYHPSHERDKFLTVDEIRRAVSAFAAMGA-QKVRITGGEP-TL 83

Query: 158 SHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
               LQ  + +  L  I+HV            +  R+  ++    +     + +++ +  
Sbjct: 84  RKDFLQITENITALDGIRHV--------ALTTNGYRMAQDVGAWKQAGISSINVSVDSLD 135

Query: 216 PY---EFS-----EEAIAAISRLANAGII-LLSQSVLLKGIN 248
           P    + +      E +  I R   AG   +   SVL+K +N
Sbjct: 136 PRMFYQITGENKFTEVMRGIDRAFEAGYRKIKVNSVLMKDLN 177


>gi|331085298|ref|ZP_08334384.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 9_1_43BFAA]
 gi|330408081|gb|EGG87571.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 9_1_43BFAA]
          Length = 440

 Score = 39.3 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 10/113 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             LK+   C  +C +C   ++ G+ +   +  +        + E+     ++      L 
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFR--SVPMEQLVREAEELAEQGVKELILVAQETTLY 203

Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                  K L K+LK L  I  ++ +R    V    P+ I  ELIQ +KE  K
Sbjct: 204 GKDLYGEKSLHKLLKELCKIAGIRWIR----VLYCYPEEITDELIQVMKEESK 252


>gi|284990944|ref|YP_003409498.1| coenzyme PQQ biosynthesis protein E [Geodermatophilus obscurus DSM
           43160]
 gi|284064189|gb|ADB75127.1| coenzyme PQQ biosynthesis protein E [Geodermatophilus obscurus DSM
           43160]
          Length = 370

 Score = 39.3 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 85/229 (37%), Gaps = 26/229 (11%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L +L + CP++C +C    +  +     L++ + +  L        + ++  +GG+PL+
Sbjct: 12  LLAELTYGCPLHCSYCS-NPIDLAAHTDELTTAEWQRVLVE-ARDLGVLQLHLSGGEPLL 69

Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
                 + +    L    ++      +    + P+R    L   L      V I++ A+ 
Sbjct: 70  RRDLPEIVRCAGELGLYTNLI-----TSALGLTPRRAEELLAAGLD----HVQISLQADE 120

Query: 216 P---------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
                       F  + +AA   +   G  L    VL +   D    + +L       RI
Sbjct: 121 AALSDRLAGVRSFERKLVAA-RLVKELGWPLTLNVVLHRHNVDRVASILDLAEQLGADRI 179

Query: 267 K----PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
           +     YY        G    R  +E  Q +V + +E++ G  +  Y+L
Sbjct: 180 ELAHTQYYGWALRNRDGLLPSRAQLERAQDVVRAARERLQGRMEVIYVL 228


>gi|284050769|ref|ZP_06380979.1| molybdenum cofactor biosynthesis protein A [Arthrospira platensis
           str. Paraca]
 gi|291572046|dbj|BAI94318.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 420

 Score = 39.3 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 99  LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L ++  C  YC +CF   EM  S K TVL+ +  E  + +I      + +   GG+P + 
Sbjct: 3   LIVIDKCSNYCAYCFASTEMGKSGKKTVLTREGIERVVQFISRSGPNFRLNIIGGEPFLY 62

Query: 158 SHKRLQKVLKT 168
               L  +L+ 
Sbjct: 63  KD--LVYLLEK 71


>gi|300024258|ref|YP_003756869.1| molybdenum cofactor biosynthesis protein A [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526079|gb|ADJ24548.1| molybdenum cofactor biosynthesis protein A [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 349

 Score = 39.3 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 41/174 (23%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +LS ++ +   +    +  + ++  TGG+PL+  
Sbjct: 34  VSVTDRCDFRCVYCMSEHMTFLPKRDLLSLEELDVLCSAFVRR-GVKKLRITGGEPLV-- 90

Query: 159 HKRLQKVLKTLRYIKHVQI-----LRFHS-----------------RVPIVDPQRINPEL 196
            K +  + + L    H++      L   +                     V    I+P+ 
Sbjct: 91  RKNIMWLFEALGR--HLESGDLKELTLTTNGSQLEKYAGELKAAGVERINVSIDTIDPDK 148

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
            + +   G    +                 +     AGI +   +V LKG+N+D
Sbjct: 149 FKAITRWGNLATVM--------------RGLDAAEKAGIKIKINAVALKGVNED 188


>gi|284047809|ref|YP_003398148.1| hypothetical protein Acfer_0430 [Acidaminococcus fermentans DSM
           20731]
 gi|283952030|gb|ADB46833.1| hypothetical protein Acfer_0430 [Acidaminococcus fermentans DSM
           20731]
          Length = 326

 Score = 39.3 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 15/143 (10%)

Query: 84  SPLKGIVHRYPDR-----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
           + ++  VH Y  R     + + + + C  +C FC  +E      G   S +    ++  +
Sbjct: 7   TAVEAAVHPYKTRSGGATVTVFVPYDCRNHCPFCVNKEEYADMTG--FSLEAICQSIRKM 64

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
              +   + +FTGG+PL  + K LQ +L  +     V     ++ +P+   ++   E++ 
Sbjct: 65  DALTPYCDFVFTGGEPL-ANLKSLQAMLDQVSDTHKVY---INTTLPVSR-EQSEEEVLA 119

Query: 199 CLKE-AGKPVYIAI--HANHPYE 218
            LK+ AGK   + I  H  H  E
Sbjct: 120 FLKKNAGKITCLNISRHMQHYVE 142


>gi|167561620|ref|ZP_02354536.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia oklahomensis
           EO147]
 gi|167568856|ref|ZP_02361730.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia oklahomensis
           C6786]
          Length = 457

 Score = 39.3 bits (91), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 26/138 (18%)

Query: 91  HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
           H  P R+      + ++  C  YC +C     V         S+  +  L  I       
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQG 192

Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           + EV   G +       L      +     +++ +  I  ++ +R+ +      P+    
Sbjct: 193 VREVTLLGQNVNAYRGALTAGASDIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248

Query: 195 ELIQCLKEAGKPVYIAIH 212
            L+    +  K +   +H
Sbjct: 249 RLLDVYAKVPK-LVDHLH 265


>gi|330797004|ref|XP_003286553.1| hypothetical protein DICPUDRAFT_31087 [Dictyostelium purpureum]
 gi|325083458|gb|EGC36910.1| hypothetical protein DICPUDRAFT_31087 [Dictyostelium purpureum]
          Length = 395

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R+   + + L+  C + C +C   E  +  Q+  +L++++           + + ++ FT
Sbjct: 76  RHHTYLRISLIDTCNLKCLYCHPEEGFIKQQQDKLLTAEEIIRLSKLFVS-AGVNKIRFT 134

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           GG+PL+   K + K+++ +  IK ++ +   +
Sbjct: 135 GGEPLV--RKEIDKIIEEVGKIKGIEKIGITT 164


>gi|282865955|ref|ZP_06275004.1| Radical SAM domain protein [Streptomyces sp. ACTE]
 gi|282559279|gb|EFB64832.1| Radical SAM domain protein [Streptomyces sp. ACTE]
          Length = 364

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 27/152 (17%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE---VIFTGGD 153
           +LL L   CP+ C  C           TV  + D    + ++   +       V+ TGG+
Sbjct: 17  LLLGLTRRCPLSCAHCS-----TGSDPTVREAPDAGRLVRFVGSFTSENRPDVVMLTGGE 71

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQR---INPELIQCLKEAGK-P 206
           PL+L       +++ L  +      R  SR  +   +   R   I   +++ +       
Sbjct: 72  PLLLP-----GLVEELSALAR----RAGSRTALLSGMFFARSRHIPAPILRAITGVDHFS 122

Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIIL 237
             + +H  H  E    +   A+ R+  AG+ +
Sbjct: 123 ASLDVH--HEREVGRADVFRALHRIREAGVAV 152


>gi|114617057|ref|XP_519489.2| PREDICTED: leucine zipper protein 5 isoform 10 [Pan troglodytes]
 gi|114617059|ref|XP_001150332.1| PREDICTED: leucine zipper protein 5 isoform 7 [Pan troglodytes]
 gi|114617061|ref|XP_001150466.1| PREDICTED: leucine zipper protein 5 isoform 9 [Pan troglodytes]
 gi|114617063|ref|XP_001150190.1| PREDICTED: leucine zipper protein 5 isoform 6 [Pan troglodytes]
          Length = 1143

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%)

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
           +  V       +  +     + Y+    +  E + +         K+L  +LK L     
Sbjct: 744 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 797

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
            ++ L   +  P   P+  +      L+  G    ++IH  H   F  E    +S L + 
Sbjct: 798 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSMLEDT 850

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
           G  L S+  +L  I D  E    L R   + +I   YL           G   F++  ++
Sbjct: 851 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 907

Query: 289 EGQKIVASLKE 299
               I+ ++K 
Sbjct: 908 RSLGIMQTVKG 918


>gi|114617075|ref|XP_001150126.1| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes]
          Length = 1156

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%)

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
           +  V       +  +     + Y+    +  E + +         K+L  +LK L     
Sbjct: 744 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 797

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
            ++ L   +  P   P+  +      L+  G    ++IH  H   F  E    +S L + 
Sbjct: 798 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSMLEDT 850

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
           G  L S+  +L  I D  E    L R   + +I   YL           G   F++  ++
Sbjct: 851 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 907

Query: 289 EGQKIVASLKE 299
               I+ ++K 
Sbjct: 908 RSLGIMQTVKG 918


>gi|167643994|ref|YP_001681657.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Caulobacter
           sp. K31]
 gi|229890472|sp|B0T155|MIAB_CAUSK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|167346424|gb|ABZ69159.1| RNA modification enzyme, MiaB family [Caulobacter sp. K31]
          Length = 450

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/121 (14%), Positives = 40/121 (33%), Gaps = 15/121 (12%)

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +   +E+ D +       + G+         L +   C  +C FC      G +      
Sbjct: 136 DFAADEKFDALPAERQ--VSGVS------AFLTVQEGCDKFCTFCVVPYTRGGE--WSRP 185

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK---RLQKVLKTLRYIKHVQILRFHSRV 184
            +  E     +     + EV   G + +         L ++++ L  I  +  +R+ +  
Sbjct: 186 PEQIEDEARRL-ADQGVREVTLLGQN-VNAYDGGGYTLARLVRRLAKIPGLDRIRYTTSH 243

Query: 185 P 185
           P
Sbjct: 244 P 244


>gi|170720721|ref|YP_001748409.1| molybdenum cofactor synthesis domain-containing protein
           [Pseudomonas putida W619]
 gi|169758724|gb|ACA72040.1| molybdenum cofactor synthesis domain protein [Pseudomonas putida
           W619]
          Length = 322

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C +C    + +V +Q    LS++     +AY+ E + I  +  TGG+PL+
Sbjct: 15  VSLTAACNYACSYCVPNGKRLVAAQDE--LSAEALARGVAYLIEAAGIERLRITGGEPLV 72

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHS 182
               RL   L  +  ++ +Q +   +
Sbjct: 73  SP--RLNAFLAAVAKLE-LQDITLTT 95


>gi|91776646|ref|YP_546402.1| molybdenum cofactor synthesis-like protein [Methylobacillus
           flagellatus KT]
 gi|91710633|gb|ABE50561.1| GTP cyclohydrolase subunit MoaA [Methylobacillus flagellatus KT]
          Length = 343

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 83/198 (41%), Gaps = 26/198 (13%)

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +P     P+  + ++P   ++ ++  R+    L +   C   C +C   +MV   +  VL
Sbjct: 1   MPGLNSRPMPSSAYTPE--LIDQFGRRVDYIRLSITDRCDFRCVYCMGDDMVFLPREDVL 58

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK-RLQKVLKTLRYIKHVQILRFHSRVP 185
           S ++    +        + +V  TGG+PL+  +   L + +  L  ++ + +    S++ 
Sbjct: 59  SLEECARLVRTF-VTLGVSKVRITGGEPLVRKNALTLFQEVGRLPGLRELTMTTNGSQL- 116

Query: 186 IVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAI--------AAISRLANAGII 236
               +R   +    LK+AG   + I++ +  P  F +             I    +AG  
Sbjct: 117 ----ERYAHD----LKKAGLSRINISMDSLDPERFRKITRVGDLDKVLRGIQAAKDAGFT 168

Query: 237 -LLSQSVLLKGINDDPEI 253
            +   +VL++GIND   I
Sbjct: 169 HIKLNTVLMRGINDTEAI 186


>gi|150016055|ref|YP_001308309.1| radical SAM domain-containing protein [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902520|gb|ABR33353.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052]
          Length = 343

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 11/117 (9%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFTGGDP 154
           +      CP  C FC +  + G     V +S        Y   I+ K+   E+ F GG  
Sbjct: 10  IFVPHEGCPHNCVFCNQDRITGVDDEEVTASSVITTINDYLETIKNKNATIEISFFGGTF 69

Query: 155 LILSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
             +  ++ +++LK  +  K    +  +R  +R     P  IN  ++  LKE G  + 
Sbjct: 70  TGIREEKQRELLKVAKEFKEKGLIDKIRLSTR-----PDYINDYILTYLKEYGVDII 121


>gi|150391787|ref|YP_001321836.1| molybdenum cofactor biosynthesis protein A [Alkaliphilus
           metalliredigens QYMF]
 gi|167011809|sp|A6TVF9|MOAA_ALKMQ RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|149951649|gb|ABR50177.1| molybdenum cofactor biosynthesis protein A [Alkaliphilus
           metalliredigens QYMF]
          Length = 320

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +  +C + C++C   + +       +L+ ++ E  +  I  ++ I +V  TGG+PL+ 
Sbjct: 14  ISITDLCNLRCQYCMPEKGIYKKTHQDILTLEEIEQIVR-IGAENGINKVRITGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQIL 178
             K +  ++K +  I  +Q +
Sbjct: 72  -RKGVIGLIKNISNIPGIQDI 91


>gi|294496381|ref|YP_003542874.1| radical SAM protein [Methanohalophilus mahii DSM 5219]
 gi|292667380|gb|ADE37229.1| Radical SAM domain protein [Methanohalophilus mahii DSM 5219]
          Length = 396

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 25/155 (16%)

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQ 139
           N      +  R P+ +  ++   C   C  C      G ++   T    K  + AL    
Sbjct: 84  NAEVQHALGRRVPETVSFEITRQCKCNCDHCIIS---GGEEDIDTETVKKTIDDALD--- 137

Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQ 198
                + +IFT GDPL+        + + + Y+   + +     V +  P   +NP+  +
Sbjct: 138 --MGAFIIIFTEGDPLLRED-----IFELIDYVDKERAI-----VNMYTPGTDMNPQTAR 185

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
            LK+AG    +    +       E   A+ RL  A
Sbjct: 186 KLKQAGLHNLLVSIYST----DPEKHNAVRRLEGA 216


>gi|291532427|emb|CBL05540.1| Radical SAM superfamily [Megamonas hypermegale ART12/1]
          Length = 130

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
             + C ++C  C+R    G +    L++++ +  L  I + +    +IF+GG+PL+   
Sbjct: 7   TTNACNMFCDHCYRDA--GCKADEELNTQEAKTLLEQIAK-AGFKIMIFSGGEPLMRPD 62


>gi|300023006|ref|YP_003755617.1| coenzyme PQQ biosynthesis protein E [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299524827|gb|ADJ23296.1| coenzyme PQQ biosynthesis protein E [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 386

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 44/279 (15%), Positives = 99/279 (35%), Gaps = 51/279 (18%)

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124
            E+  L +   DP+ +       G+        L +L H CP+ C +C    +   +  T
Sbjct: 2   NEIAPLEQFSPDPVAEVCARAPVGL--------LAELTHRCPLQCPYCS-NPLELDRVNT 52

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
            L++ + +  +     +  I ++  +GG+P +     L+ ++              ++  
Sbjct: 53  ELTTAEWQDVMRQ-AAELGILQIHLSGGEPTLRKD--LEDIVDVAAKAG------LYT-N 102

Query: 185 PIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR-------------- 229
            I     +  + ++ L++ G   V ++I      +  +     +S               
Sbjct: 103 LITAGVTLTEDRLKKLQDLGLDHVQLSI-----QDVDDANAERMSAYKGGLAKKREVGKW 157

Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI-------KPYYLHHPDLAAGTSH 282
           +   G+ L   + + +    + E L N++   VE+           YY       A    
Sbjct: 158 VRKLGMPLTINAPIHRF---NIENLPNIIDFAVEMGAGRIEVANIQYYAWALKNRASLMP 214

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321
            R  + +  +IV   KE++ G+    +++  P  Y K  
Sbjct: 215 TRAQVIKSAEIVEEAKERLKGILVFDFVV--PDYYAKTP 251


>gi|239815326|ref|YP_002944236.1| molybdenum cofactor biosynthesis protein A [Variovorax paradoxus
           S110]
 gi|239801903|gb|ACS18970.1| molybdenum cofactor biosynthesis protein A [Variovorax paradoxus
           S110]
          Length = 383

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F ++        +LS ++             + ++  TGG+
Sbjct: 47  ISVTDRCNFRCSYCMPKDVFDKDYQYLPHSALLSFEEMTRLARLFAAH-GVRKIRLTGGE 105

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K ++ ++  L  I
Sbjct: 106 PLL--RKNIEALIAQLSEI 122


>gi|254446032|ref|ZP_05059508.1| RNA modification enzyme, MiaB family [Verrucomicrobiae bacterium
           DG1235]
 gi|198260340|gb|EDY84648.1| RNA modification enzyme, MiaB family [Verrucomicrobiae bacterium
           DG1235]
          Length = 427

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 40/121 (33%), Gaps = 9/121 (7%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            R  LK+   C   C FC                   E A    + +  I E++ TG + 
Sbjct: 129 QRANLKIQDGCSFVCSFCII-PFARGAARAREMGNLLEEARQ--KAEQGIREIVITGVNI 185

Query: 155 LILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
                K   L KVL+ L  ++ +  +R  S  P   P     EL   + +    +    H
Sbjct: 186 GTYDTKGGGLLKVLEGLNAVEGIDRIRISSIEPTTIP----TELFGLMNDPQHALLPFFH 241

Query: 213 A 213
            
Sbjct: 242 I 242


>gi|166030899|ref|ZP_02233728.1| hypothetical protein DORFOR_00579 [Dorea formicigenerans ATCC
           27755]
 gi|166029166|gb|EDR47923.1| hypothetical protein DORFOR_00579 [Dorea formicigenerans ATCC
           27755]
          Length = 440

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 16/116 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150
             +K+   C  +C +C   ++ G+ + +V   K    A         + E+I        
Sbjct: 146 AYMKIAEGCDKHCTYCIIPKLRGNYR-SVPMEKLLAEAKD--LADQGVKELILVAQETTV 202

Query: 151 -GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            G D  +   K L K+L+ L  I  +Q +R         P+ I  ELIQ +KE  K
Sbjct: 203 YGKD--LYGEKSLHKLLRELCKISGIQWIRI----LYCYPEEIYDELIQTIKEENK 252


>gi|317181628|dbj|BAJ59412.1| hypothetical protein HPF57_0338 [Helicobacter pylori F57]
          Length = 418

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C     V  +  +    K  E     +     + EV+ TG +
Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCSKGVQEVVLTGTN 189

Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
                  R   + +++K L  I  ++ +R  S
Sbjct: 190 VGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|256828468|ref|YP_003157196.1| Radical SAM domain-containing protein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256577644|gb|ACU88780.1| Radical SAM domain protein [Desulfomicrobium baculatum DSM 4028]
          Length = 292

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 7/77 (9%)

Query: 97  ILLKLLHVCPVY-CRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           +L+++   CP   C FC  +R           +S +   AA     +  +   +    GD
Sbjct: 17  VLIRVADGCPHNSCAFCAMYRGIPYRVHDQETISRRVALAA----AQHPEARRIFLADGD 72

Query: 154 PLILSHKRLQKVLKTLR 170
            L L  + L+ +L   R
Sbjct: 73  ALALPAQLLEMILTQAR 89


>gi|145299699|ref|YP_001142540.1| molybdenum cofactor biosynthesis protein A [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142852471|gb|ABO90792.1| molybdenum cofactor biosynthesis enzyme A [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 366

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 17/161 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  VC   C +C         + + LS  +    ++         +V  TGG+P +  
Sbjct: 57  LSVTDVCNFRCTYCLPDGYRPEGRKSFLSLDEIRRIVSGFAAMGT-RKVRLTGGEPSLRR 115

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
                 +++T+     ++ +         +  R+     +        + +++ +  P +
Sbjct: 116 D--FTAIIETVANTPGIEKV-----AMTTNGYRLKERAREWFDAGLTALNVSVDSLDPRQ 168

Query: 219 FS--------EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
           F          E +  I     AG   +   +VLLKG+ND 
Sbjct: 169 FHQITGENKLAEVMDGIEAALAAGFKSVKINAVLLKGLNDH 209


>gi|158521512|ref|YP_001529382.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158510338|gb|ABW67305.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 341

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 25/160 (15%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +      CP  C FC +  + G +               L Y  +     ++ F GG+ L
Sbjct: 12  VFLPHAGCPHRCVFCDQDAITGQKASLTADDLHDHVHRYLQYRGDNRGHAQIAFYGGNFL 71

Query: 156 ILSHKRLQKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-- 210
            L  + L ++L      +    VQ +RF +R     P  I  + +  LK+          
Sbjct: 72  GLERESLTQMLHAASAFVDQGLVQAIRFSTR-----PDTITQKNLDLLKDYPVTTVEVGV 126

Query: 211 ----------IHANHPYEFSEEAIAAISRLANAGIILLSQ 240
                         H  E   ++ AA+  L  AG    +Q
Sbjct: 127 QSMDDRVLEKARRGHTAE---QSTAALLLLKQAGYETGAQ 163


>gi|15898384|ref|NP_342989.1| Heme biosynthesis related protein [Sulfolobus solfataricus P2]
 gi|284174114|ref|ZP_06388083.1| Heme biosynthesis related protein [Sulfolobus solfataricus 98/2]
 gi|13814795|gb|AAK41779.1| Heme biosynthesis related protein [Sulfolobus solfataricus P2]
 gi|261602951|gb|ACX92554.1| Radical SAM domain protein [Sulfolobus solfataricus 98/2]
          Length = 394

 Score = 38.9 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 8/120 (6%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           + +  +P+   L  + EE      ++    ++  + +      L L + C   C +CF++
Sbjct: 33  LRKGVVPEH--LKDIIEEGFSATDEDLDEEIEKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173
              G +K   +S K T   + YI++  +  +V  T  GG+P IL  ++++++ + L  +K
Sbjct: 91  ---GFRKNISVSDKVTRGFVNYIRKNEKGRKVRVTYFGGEP-ILQLRKIEEISRELSDLK 146


>gi|329928802|ref|ZP_08282641.1| menaquinone biosynthesis protein, SCO4550 family [Paenibacillus sp.
           HGF5]
 gi|328937445|gb|EGG33866.1| menaquinone biosynthesis protein, SCO4550 family [Paenibacillus sp.
           HGF5]
          Length = 377

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 9/77 (11%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--EVIFTGG---D-PL 155
            ++C V+CRFC      GS +G VLS    E     IQE   +   E++  GG   D P 
Sbjct: 62  TNICDVFCRFCAFYRRPGSSEGYVLSD---ETIFQKIQETEDVNGTEILMQGGVNPDLPF 118

Query: 156 ILSHKRLQKVLKTLRYI 172
                 L+ + K    I
Sbjct: 119 NYYTDLLRNIKKRFPSI 135


>gi|312622876|ref|YP_004024489.1| molybdenum cofactor biosynthesis protein a [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312203343|gb|ADQ46670.1| molybdenum cofactor biosynthesis protein A [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 314

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 67/166 (40%), Gaps = 19/166 (11%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
            R  D + L +   C  +C +C  +++   +    LS ++    ++  ++   I ++  T
Sbjct: 12  SRKIDYLRLSVTDRCNFFCMYCRTKDLYYERIDQ-LSKEEIFRIISAFKK-LGIQKLRIT 69

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P +     + ++++    I  ++ +   +            ++ + +K   K V I+
Sbjct: 70  GGEPFLRDD--IVEIIEFAHSIG-IENINITT---NGW--LDTEKIKKIIKSPLKSVNIS 121

Query: 211 IHA---NHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGIN 248
           +           +      + + AI  L     + ++ +VL++ +N
Sbjct: 122 LDTLDKEKYRSVTGIDGLDKVLTAIDELREHKRVKIN-TVLIRSVN 166


>gi|254719054|ref|ZP_05180865.1| molybdenum cofactor biosynthesis protein A [Brucella sp. 83/13]
 gi|265984046|ref|ZP_06096781.1| molybdenum cofactor biosynthesis protein A [Brucella sp. 83/13]
 gi|306838976|ref|ZP_07471798.1| molybdenum cofactor biosynthesis protein A [Brucella sp. NF 2653]
 gi|264662638|gb|EEZ32899.1| molybdenum cofactor biosynthesis protein A [Brucella sp. 83/13]
 gi|306405943|gb|EFM62200.1| molybdenum cofactor biosynthesis protein A [Brucella sp. NF 2653]
          Length = 344

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 41/173 (23%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLRYIKHVQ---------------ILRF-------HSRVPIVDPQRINPEL 196
            K +  ++  L    H++               + RF         R   V    +NPE 
Sbjct: 86  RKNIMHLIGNLSR--HLKSGALDELTLTTNGSQLARFAGELADCGVRRINVSLDTLNPEK 143

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
            + +   G                   +  I     AGI +   +V LK  ND
Sbjct: 144 FRTITRWGD--------------LPRVLEGIDAARKAGIHVKINAVALKDFND 182


>gi|121551156|gb|ABM55768.1| MiaB [Pasteuria ramosa]
          Length = 361

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 34/202 (16%)

Query: 22  KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81
            ++   +K I   Y     P +  L   HN    I R  +P   E     +E    +   
Sbjct: 2   AQEEVVVKRILQKY-----PYVDLLFGTHN----IHR--LPYLLEDAYFNKEIVVEVWSR 50

Query: 82  NHSPLKGIVHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
               ++ I     D  R  + +++ C  +C +C     +         S+  E  +  I+
Sbjct: 51  EGEIVEQIPRLRHDQLRAFVNIMYGCDKFCTYC-----IVPYTRGKERSRQPEDIIEEIK 105

Query: 140 EKSQ--IWEVIFTGGDP-LILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
           + ++    EV   G +             RL  +L  L  I ++  +RF +      P+ 
Sbjct: 106 QLAEQGYQEVTLLGQNVNAYGKDFDKFPYRLSNLLDDLSKI-NISRVRFTTSH----PKD 160

Query: 192 INPELIQCLKEAGKPVYIAIHA 213
            + ELI  L + G    +  H 
Sbjct: 161 CDDELINVLAKRGN---LVEHF 179


>gi|158317474|ref|YP_001509982.1| radical SAM domain-containing protein [Frankia sp. EAN1pec]
 gi|158112879|gb|ABW15076.1| Radical SAM domain protein [Frankia sp. EAN1pec]
          Length = 414

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 8/83 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIWE-----VI 148
           I+LK+   C + C +C+          Q+   +S    EA    +   ++  E     +I
Sbjct: 39  IVLKINSRCNLSCTYCYVYHQADQNWRQQPVTMSPAVVEATARRLAAHAKTHELPWMQII 98

Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171
             GG+PL+  H  L+ V + L  
Sbjct: 99  LHGGEPLLAGHDHLRNVAERLLA 121


>gi|331001874|ref|ZP_08325395.1| MiaB-like tRNA modifying enzyme YliG [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412197|gb|EGG91591.1| MiaB-like tRNA modifying enzyme YliG [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 440

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 55/161 (34%), Gaps = 27/161 (16%)

Query: 97  ILLKLLHVCPVYCRFCFR-----REMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFT 150
             LK+   C   C +C                 +  +KD   A   I+E   +  E    
Sbjct: 146 AYLKIAEGCNKNCTYCIIPSLRGNYRSYPMDDLITQAKDL--AAQGIKELILVAQETTLY 203

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209
           G D  +   K L K+LK L  +  ++ +R         P+ I  ELI  +    K   Y+
Sbjct: 204 GVD--LYGEKTLPKLLKELAKVSGIEWIRI----LYCYPEEITDELIDVIANEEKVCKYL 257

Query: 210 AIHANHP-----YEFS-----EEAIAAISRLANA--GIILL 238
            I   H         +     ++ ++ I +L     GI L 
Sbjct: 258 DIPIQHASDNILRRMARRTTHDDLVSIIGKLRKNIPGITLR 298


>gi|288926768|ref|ZP_06420678.1| probable arylsulfatase-activating protein AslB [Prevotella buccae
           D17]
 gi|288336449|gb|EFC74825.1| probable arylsulfatase-activating protein AslB [Prevotella buccae
           D17]
          Length = 407

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 47/177 (26%)

Query: 101 LLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFT--GGDP 154
           +   C + C++C+   +  +  +    V+S +  E     YIQ ++ + +V+FT  GG+P
Sbjct: 18  VGASCNLRCKYCYYLEKSHLYRNAPARVMSDELLERFVQEYIQAQT-MSQVLFTWHGGEP 76

Query: 155 LILSHKRLQKVLKTL---------RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           L+   + L    K +         R I +       +   +     +  E  +  KE   
Sbjct: 77  LM---RPLSFYRKAVALQERYAFGRQIDN----TIQTNGTL-----LTDEWCEFFKEHNW 124

Query: 206 PVYIAIHANHPYEFSEE-------------AIAAISRLANAGIILLSQSVLLKGIND 249
            V I+   + P EF +E              +  I  L   G+   + +V    +ND
Sbjct: 125 LVGIS--IDGPQEFHDEYRRTASDKPSWQKVMRGIRLLRKHGVEWNAMAV----VND 175


>gi|168213427|ref|ZP_02639052.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens CPE str. F4969]
 gi|170714976|gb|EDT27158.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens CPE str. F4969]
          Length = 169

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R+       C   C  CF      +        +D +  +  + +   I  V F+GGDPL
Sbjct: 23  RVFF--SQGCKHNCIGCF---NPDTHDFNGGEERDIDELIKDLADNPFIDGVTFSGGDPL 77


>gi|110803994|ref|YP_699759.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens SM101]
 gi|110684495|gb|ABG87865.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens SM101]
          Length = 169

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R+       C   C  CF      +        +D +  +  + +   I  V F+GGDPL
Sbjct: 23  RVFF--SQGCKHNCIGCF---NPDTHDFNGGEERDIDELIKDLADNPFIDGVTFSGGDPL 77


>gi|110799332|ref|YP_697190.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens ATCC 13124]
 gi|168205763|ref|ZP_02631768.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens E str. JGS1987]
 gi|168209741|ref|ZP_02635366.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens B str. ATCC 3626]
 gi|168217620|ref|ZP_02643245.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens NCTC 8239]
 gi|169343291|ref|ZP_02864301.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens C str. JGS1495]
 gi|182624305|ref|ZP_02952090.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens D str. JGS1721]
 gi|110673979|gb|ABG82966.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens ATCC 13124]
 gi|169298589|gb|EDS80670.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens C str. JGS1495]
 gi|170662721|gb|EDT15404.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens E str. JGS1987]
 gi|170712105|gb|EDT24287.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens B str. ATCC 3626]
 gi|177910523|gb|EDT72896.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens D str. JGS1721]
 gi|182380292|gb|EDT77771.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens NCTC 8239]
          Length = 169

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R+       C   C  CF      +        +D +  +  + +   I  V F+GGDPL
Sbjct: 23  RVFF--SQGCKHNCIGCF---NPDTHDFNGGEERDIDELIKDLADNPFIDGVTFSGGDPL 77


>gi|325925005|ref|ZP_08186428.1| GTP cyclohydrolase subunit MoaA [Xanthomonas perforans 91-118]
 gi|325544589|gb|EGD15949.1| GTP cyclohydrolase subunit MoaA [Xanthomonas perforans 91-118]
          Length = 343

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 13/108 (12%)

Query: 78  IGDNNHSPLKGIVHRY--PDRIL-LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKD 130
           + D   +P   +  RY  P R L L ++  C   C +C   + V    G      LS   
Sbjct: 6   LPDLATAP---MQDRYGRPLRDLRLSVIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQ 62

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            E  +        + +V  TGG+PL+     L  ++  L  I+ ++ L
Sbjct: 63  LETLVRAFVS-VGVTKVRLTGGEPLLRRD--LPSLIARLAAIEGIEDL 107


>gi|319790295|ref|YP_004151928.1| radical SAM enzyme, Cfr family [Thermovibrio ammonificans HB-1]
 gi|317114797|gb|ADU97287.1| radical SAM enzyme, Cfr family [Thermovibrio ammonificans HB-1]
          Length = 345

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 38/203 (18%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVI 148
           + + +     CP  CRFC       ++ G   +    E    YIQ      E  +I  V+
Sbjct: 100 NTLCVSTQVGCPAGCRFCL-----TAKDGFTRNLTAGEIVDQYIQVQRDVGENRRISNVV 154

Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-P 206
           F G G+PL L+   ++K    +  + H  +L   +R   V    I P + +  KE  K  
Sbjct: 155 FMGMGEPL-LNFDNVKK---AVEIMTHRDMLDLSTRKVTVSTVGIVPGIDRMAKEMNKVK 210

Query: 207 VYIAIHANHPYEFS------------EEAIAAISRL-ANAGIILLSQSVLLKGINDDPEI 253
           + +++HA    E               E +AA+ R  A+    ++ + V+LKG+ND  E 
Sbjct: 211 LAVSLHATT-DEVRNMLVPLNRKYPIGEIMAALRRYPADNNRRIMIEYVMLKGVNDSLED 269

Query: 254 LANLMRTFVELRIK-------PY 269
              L++    + +K       PY
Sbjct: 270 ARRLVKLVKGIPVKVNLIPFNPY 292


>gi|191170321|ref|ZP_03031874.1| putative coproporphyrinogen III oxidase [Escherichia coli F11]
 gi|190909129|gb|EDV68715.1| putative coproporphyrinogen III oxidase [Escherichia coli F11]
          Length = 419

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%)

Query: 94  PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
             R++   +  C  +C FC F +           +    ++ E  A + + + + I  V 
Sbjct: 30  RKRLVYLHIPFCATHCTFCGFYQNRFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVY 89

Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
           F GG P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 90  FGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138


>gi|89900261|ref|YP_522732.1| molybdenum cofactor biosynthesis protein A [Rhodoferax
           ferrireducens T118]
 gi|89344998|gb|ABD69201.1| GTP cyclohydrolase subunit MoaA [Rhodoferax ferrireducens T118]
          Length = 388

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F ++        +LS ++             + ++  TGG+
Sbjct: 52  ISVTDRCNFRCNYCMPKEIFDKDYAYLPHKALLSFEEITRIAKVFVAH-GVQKIRLTGGE 110

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K ++++++ L  +
Sbjct: 111 PLL--RKNIERLIEQLAAL 127


>gi|238919809|ref|YP_002933324.1| coproporphyrinogen III oxidase [Edwardsiella ictaluri 93-146]
 gi|238869378|gb|ACR69089.1| coproporphyrinogen III oxidase-like protein, putative [Edwardsiella
           ictaluri 93-146]
          Length = 460

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 45/238 (18%), Positives = 87/238 (36%), Gaps = 41/238 (17%)

Query: 39  LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN-HSPLKGIVHRY--PD 95
           +TP +A            A + IP  E    +P   + P+  +      + +  R   P+
Sbjct: 5   ITPYLA------------AAEGIPFPERWATMPWRHQQPLPADALTQGWQQLCQRTLPPN 52

Query: 96  RILLKL-LHVCPVYCRFC--FRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           + L+ + +  C  +C FC  ++       +      +    D E+AL  +Q+ + I  + 
Sbjct: 53  KRLVYVHIPFCATHCTFCGFYQNRFSEQAIARYFDYLQREIDLESALP-LQQSAPIHAIY 111

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQI---LRFHSRVPIVDPQRINPELIQCLKEAGK 205
             GG P  L+ ++L +++  LR +  +     +    RV   D  RI+     CL     
Sbjct: 112 LGGGTPSALNAEQLHRLIVQLRSLLPLAADCEITVEGRVLNFDDARID----ACLAAGAN 167

Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI--NDDPEILANLMRTF 261
              I I       F       + R A+    +      L+ +   D   ++ +LM   
Sbjct: 168 RFSIGIQT-----FDTHLRQRMGRRADRDRAI----AFLRALAERDRAAVICDLMFGL 216


>gi|313619543|gb|EFR91216.1| molybdenum cofactor biosynthesis protein A [Listeria innocua FSL
           S4-378]
          Length = 120

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 7/96 (7%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G VH Y   I + +   C + C +C   E +       VLS  +  + +  +  K  I +
Sbjct: 9   GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           V  TGG+PL+ +   + ++++ L  I  ++ +   +
Sbjct: 65  VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITT 98


>gi|311031621|ref|ZP_07709711.1| ribosomal protein S12 methylthiotransferase [Bacillus sp. m3-13]
          Length = 454

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 52/130 (40%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150
             R  LK+   C  +C FC      G     ++ S+D +  +   Q+   +   E++ T 
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEVVTQAQQLVDAGYKEIVLTG 196

Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                 G D   +       +L+ L   ++ ++ +R  S    ++  +I  E+I+ L  +
Sbjct: 197 IHTGGYGED---MKDYNFAMLLRELDEKVEGLKRIRISS----IEASQITDEVIEVLNNS 249

Query: 204 GKPVYIAIHA 213
            K +   +H 
Sbjct: 250 DK-IVRHLHI 258


>gi|325849067|ref|ZP_08170559.1| radical SAM domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325480312|gb|EGC83375.1| radical SAM domain protein [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 358

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 29/162 (17%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQIWEVIFTGGDP 154
           +      CP  C FC +   + + K ++      K  +  L+Y        E+ F GG  
Sbjct: 10  IFIPFLGCPHDCAFCNQV-KITNYKDSINKENTIKQIDQYLSYFPNNDNPKEIAFFGG-S 67

Query: 155 LI-LSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
              L    +   L+     K    +  +R  +R     P  IN  ++  LK+    V   
Sbjct: 68  FTGLETDVMISYLEIALAYKKKGIIDRIRLSTR-----PDYINNSILDILKKYEVDVIEL 122

Query: 209 -------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQ 240
                    ++AN   H  E   ++I A   +   G  L  Q
Sbjct: 123 GIQSLDNEILNANERGHSRE---DSIKASKLIKEYGFKLGHQ 161


>gi|281423817|ref|ZP_06254730.1| translation initiation factor IF-1 [Prevotella oris F0302]
 gi|299141169|ref|ZP_07034306.1| translation initiation factor IF-1 [Prevotella oris C735]
 gi|281402044|gb|EFB32875.1| translation initiation factor IF-1 [Prevotella oris F0302]
 gi|298577129|gb|EFI48998.1| translation initiation factor IF-1 [Prevotella oris C735]
          Length = 72

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ +E G +IV      ISG  +  YI  LPG   KV++  +++ K   G     
Sbjct: 22  FRVELENGVQIV----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70


>gi|237817558|ref|ZP_04596548.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
 gi|237787313|gb|EEP61531.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           str. 2308 A]
          Length = 474

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 41/164 (25%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
            D  L   +  C   C +C           T ++ KD    L Y+     +I        
Sbjct: 70  QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-RPILDYLDVLHKEIEMIARQRG 120

Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
                 E+ F GG P I+    L  ++  LR        R       +    +DP+R+ P
Sbjct: 121 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 173

Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           E+   L  +G     + +       F  +   AI+R+  A   L
Sbjct: 174 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 212


>gi|94969171|ref|YP_591219.1| hypothetical protein Acid345_2144 [Candidatus Koribacter versatilis
           Ellin345]
 gi|123381489|sp|Q1IPQ5|RIMO_ACIBL RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|94551221|gb|ABF41145.1| SSU ribosomal protein S12P methylthiotransferase [Candidatus
           Koribacter versatilis Ellin345]
          Length = 504

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 37/151 (24%)

Query: 97  ILLKLLHVCPVYCRFC--------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
             +K+   C   C FC        FR         +V++  +  A       K  + E+ 
Sbjct: 206 AYIKVAEGCDHPCSFCIIPQLRGKFRSRRF----ESVVAEAERLA-------KQGVKEIT 254

Query: 149 FTGGDP------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
             G D       L L    L ++L+ L  I+ +Q +RF        P +I   L+Q + +
Sbjct: 255 LIGQDTTCYGEDLGLKDG-LAQLLERLAQIEELQWVRF----LYAYPNKITKRLLQTIAD 309

Query: 203 AGK-PVYIAIHANHPYEFSEEAIAAISRLAN 232
             K P Y+ +   H       A   + R+  
Sbjct: 310 NPKIPKYMDVPLQH------SAANVLKRMKR 334


>gi|294637137|ref|ZP_06715446.1| molybdenum cofactor biosynthesis protein A [Edwardsiella tarda ATCC
           23685]
 gi|291089671|gb|EFE22232.1| molybdenum cofactor biosynthesis protein A [Edwardsiella tarda ATCC
           23685]
          Length = 329

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 35/225 (15%), Positives = 67/225 (29%), Gaps = 42/225 (18%)

Query: 99  LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           L +  VC   C +C          +    LS  +               +V  TGG+P +
Sbjct: 18  LSVTDVCNFRCTYCLPDGYRPASHEAKRFLSLDEIRRVSRAFAALGT-EKVRLTGGEPTL 76

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-- 214
                   ++  +R    ++ L         +  R+  ++    ++AG    I +  +  
Sbjct: 77  RRD--FCDIIAAVRENPGIKTL-----AVTTNGYRMARDVAAW-RQAGLS-AINVSVDSL 127

Query: 215 -----HPYEFSEEAIAA-----ISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE 263
                H    + E   A     I     AG   +   +VL++ +ND      +L      
Sbjct: 128 DARQFHA--ITGEDRFAQVMAGIDAAFAAGFERIKVNTVLMRDVND-----QSLNAFLHW 180

Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308
           +R +P                    EG  +    +  +SG     
Sbjct: 181 IRHRP---IQMRFIELME-----TGEGSDLFR--RHHVSGELIRR 215


>gi|265766970|ref|ZP_06094799.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
 gi|263253347|gb|EEZ24823.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16]
          Length = 439

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C        +      +   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTIASLVEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKSTGETFFDLVKALDRVEGIERYRISS----IEPNLLTDEIIEYVSRSR---SFM 257

Query: 211 IHANHP-YEFSEEAIAAISR 229
            H + P    S+E +  + R
Sbjct: 258 PHFHIPLQSGSDEVLQLMRR 277


>gi|256751164|ref|ZP_05492045.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
 gi|256749889|gb|EEU62912.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1]
          Length = 435

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 5/86 (5%)

Query: 89  IVHRYPDRI---LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQI 144
           ++ +   +I    L +   C + C +CF +        T    ++ E  + ++ +     
Sbjct: 42  LISKKRGKINYITLYITDKCNLACTYCFNKTNNEKVTYTFFPERNIEKIIEFLKRTDIHF 101

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR 170
             + F GG+PL L  + ++K+LK + 
Sbjct: 102 VTIRFFGGEPL-LEIEYIEKILKYIE 126


>gi|253566270|ref|ZP_04843724.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|251945374|gb|EES85812.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
 gi|301164592|emb|CBW24151.1| conserved hypothetical protein [Bacteroides fragilis 638R]
          Length = 439

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C        +      +   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTIASLVEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKSTGETFFDLVKALDRVEGIERYRISS----IEPNLLTDEIIEYVSRSR---SFM 257

Query: 211 IHANHP-YEFSEEAIAAISR 229
            H + P    S+E +  + R
Sbjct: 258 PHFHIPLQSGSDEVLQLMRR 277


>gi|60683077|ref|YP_213221.1| hypothetical protein BF3627 [Bacteroides fragilis NCTC 9343]
 gi|60494511|emb|CAH09308.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343]
          Length = 439

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C        +      +   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTIASLVEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKSTGETFFDLVKALDRVEGIERYRISS----IEPNLLTDEIIEYVSRSR---SFM 257

Query: 211 IHANHP-YEFSEEAIAAISR 229
            H + P    S+E +  + R
Sbjct: 258 PHFHIPLQSGSDEVLQLMRR 277


>gi|53715140|ref|YP_101132.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
 gi|52218005|dbj|BAD50598.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46]
          Length = 439

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C        +      +   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTIASLVEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKSTGETFFDLVKALDRVEGIERYRISS----IEPNLLTDEIIEYVSRSR---SFM 257

Query: 211 IHANHP-YEFSEEAIAAISR 229
            H + P    S+E +  + R
Sbjct: 258 PHFHIPLQSGSDEVLQLMRR 277


>gi|18311485|ref|NP_563419.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Clostridium perfringens str. 13]
 gi|18146169|dbj|BAB82209.1| probable anaerobic ribonucleoside-triphosphate reductase activating
           protein [Clostridium perfringens str. 13]
          Length = 169

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R+       C   C  CF      +        +D E  +  + +   I  V F+GGDPL
Sbjct: 23  RVFF--SQGCKHNCIGCF---NPDTHDFNGGEERDIEELIKDLADNPFIDGVTFSGGDPL 77


>gi|148251870|ref|YP_001236455.1| hypothetical protein BBta_0254 [Bradyrhizobium sp. BTAi1]
 gi|146404043|gb|ABQ32549.1| hypothetical protein BBta_0254 [Bradyrhizobium sp. BTAi1]
          Length = 471

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 31/171 (18%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155
            L+++   C + C  CF       Q+         E  L  + + + +   V  +GG+P 
Sbjct: 103 ALIEITDHCNLTCPVCF--AESSPQRSHFTPLATVERMLDALVKSEGEPDLVQISGGEPT 160

Query: 156 ILSH--KRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           +       L  V    R I+HV I    LR   R P         + +  L E  + + +
Sbjct: 161 LHPDFFDILAAV--RARPIRHVMINTNGLRIA-REP---------DFVAKLAETKRGLEV 208

Query: 210 AIHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
            +  +                     A+  L + GI     + + +G+NDD
Sbjct: 209 YLQFDSLSRAGLTNIRGADLRRIRQQALENLEHQGISTTLVATIKRGVNDD 259


>gi|304437610|ref|ZP_07397565.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
 gi|304369423|gb|EFM23093.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral
           taxon 149 str. 67H29BP]
          Length = 331

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/102 (16%), Positives = 45/102 (44%), Gaps = 6/102 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + CR+C     V   +   VL+ ++    +  +     + +V  TGG+PL+ 
Sbjct: 14  VSVTDCCNLRCRYCMPAHGVKKLRHADVLTYEEILRDVRVLAA-LGVRKVRLTGGEPLVR 72

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
               + ++++ L+ I  ++ +   +   ++    +  EL+  
Sbjct: 73  RD--ITRLVRGLKEIPGIETVALTTNGVLL--GTMMDELLDA 110


>gi|83590093|ref|YP_430102.1| radical SAM family protein [Moorella thermoacetica ATCC 39073]
 gi|83573007|gb|ABC19559.1| Radical SAM [Moorella thermoacetica ATCC 39073]
          Length = 335

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 41/208 (19%), Positives = 76/208 (36%), Gaps = 39/208 (18%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
             + C +YC  C+R    G++    L++ +    +     K+    +IF+GG+PL+    
Sbjct: 7   TTNQCNLYCDHCYRDA--GARVEDELTTAEAGNLIDE-AAKAGFRIMIFSGGEPLLRPD- 62

Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPY 217
            L +++         + LR    S   +     +  EL + LK AG   V I++ +  P 
Sbjct: 63  -LPELVSRAAA----RGLRPVLGSNGTL-----LTTELARELKAAGALAVGISLDSCDPA 112

Query: 218 EFSEE---------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
                         A+A ++    AG+     + +     D+ E L +L    VEL    
Sbjct: 113 RHDRLRQKEGAWRKAVAGMAACREAGLPFQVHTTVFDWNQDELEKLTDLA---VELGAVA 169

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
           ++            F +       I A 
Sbjct: 170 HHFF----------FLVPTGRAASIEAE 187


>gi|330445221|ref|ZP_08308873.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489412|dbj|GAA03370.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 474

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 20/140 (14%), Positives = 49/140 (35%), Gaps = 27/140 (19%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           E+ D + +                  + ++  C  YC +C     V         S+  +
Sbjct: 134 EKFDSLPEPRAEGA---------TAFVSIMEGCSKYCTYC-----VVPYTRGEEVSRPLD 179

Query: 133 AALAYIQEKSQ--IWEVIFTGGDP----LILSHKRLQ---KVLKTLRYIKHVQILRFHSR 183
             L  I + ++  + EV   G +      ++    +    ++L+ +  I  +  +R+ + 
Sbjct: 180 DVLFEIAQLAEQGVREVNLLGQNVNAYRGVMHDGEIASFAELLRLVAAIDGIDRIRYTTS 239

Query: 184 VPIVDPQRINPELIQCLKEA 203
            PI        ++I+  K+ 
Sbjct: 240 HPI----EFTDDIIEVYKDT 255


>gi|145321187|gb|ABP63662.1| molybdenum cofactor biosynthesis protein A [Achromobacter sp. SY8]
          Length = 364

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 75/173 (43%), Gaps = 31/173 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGG 152
           + ++  C   C +C  RE+ G+      +  +L+  + E  A A+I+    + ++  +GG
Sbjct: 42  ISVIDQCNFRCTYCMPREVFGADYPFLRRDELLTFDELERTARAFIRL--GVRKIRLSGG 99

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC----LKEAG-KPV 207
           +PL+     L+ ++  L      +++      PI      N  L+      L  AG + +
Sbjct: 100 EPLLRKD--LEHLVAQLA-----RLVTLAGE-PIDLAMTTNGALLARKAHVLAAAGLRRL 151

Query: 208 YIAIHANHPYEFS---------EEAIAAISRLANAGII-LLSQSVLLKGINDD 250
            +++ A  P  F+          + +  I+   +AGI  +    V+ +G+NDD
Sbjct: 152 NVSLDALAPATFARIANTSASVGDVLDGIATAHDAGIRHIKINMVVQRGVNDD 204


>gi|158320272|ref|YP_001512779.1| MiaB-like tRNA modifying enzyme [Alkaliphilus oremlandii OhILAs]
 gi|158140471|gb|ABW18783.1| MiaB-like tRNA modifying enzyme [Alkaliphilus oremlandii OhILAs]
          Length = 433

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 19/127 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  YC +C      G  +        ++ E  +          EV+ TG
Sbjct: 141 KTRAFLKIQEGCNQYCTYCIIPYARGPIRSRGPLEIVEEVETLVQ-----KGFKEVVLTG 195

Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                    R     L  +LK +   + ++ +R  S    ++P     + ++ L +  K 
Sbjct: 196 IHVASYGKDRSDGTDLIHILKQVNGAQGLERIRLSS----LEPTLFTDDFLRELSQLDK- 250

Query: 207 VYIAIHA 213
             I  H 
Sbjct: 251 --ICDHF 255


>gi|83589960|ref|YP_429969.1| tRNA-i(6)A37 modification enzyme MiaB [Moorella thermoacetica ATCC
           39073]
 gi|123725725|sp|Q2RJG3|MIAB_MOOTA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|83572874|gb|ABC19426.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Moorella thermoacetica
           ATCC 39073]
          Length = 444

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 43/284 (15%), Positives = 88/284 (30%), Gaps = 77/284 (27%)

Query: 41  PVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RIL 98
           P +  L+   N       Q +PQ  E           +G+     ++ +  R     +  
Sbjct: 101 PYVDLLLGTGN------LQELPQLIEEIKAMHRPRIVVGEQEGPVVEDLPRRRARGAQAF 154

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAY--IQEKSQIWEVIFTGGDP 154
           + + + C  +C +C    + G ++     +  K+ +  +    I+       V   G D 
Sbjct: 155 VTITYGCNNFCTYCIVPYVRGRERSRRPENIIKEVKELVDQGVIEVTLLGQNVNSYGRD- 213

Query: 155 LILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
             L        +L+ +  ++ ++ +R+ +                               
Sbjct: 214 --LRDGINFAGLLERVNAVEGLKRIRYVT------------------------------- 240

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273
           +HP +F+ E +  ISRL      +     +  G N     +  LM           Y   
Sbjct: 241 SHPRDFTPELVTTISRLDKVCEHV--HLPVQAGSNR----ILELMHRG--------YT-- 284

Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGG 316
                   H+        ++VA L+  I G+      I+  PG 
Sbjct: 285 ------REHY-------LELVADLRRHIPGISLTTDLIVGFPGE 315


>gi|257792110|ref|YP_003182716.1| Radical SAM domain-containing protein [Eggerthella lenta DSM 2243]
 gi|257476007|gb|ACV56327.1| Radical SAM domain protein [Eggerthella lenta DSM 2243]
          Length = 435

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/177 (13%), Positives = 60/177 (33%), Gaps = 22/177 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGDPLI 156
             L   C   C FCF           +  +      +    +    ++  V  TGG+PL+
Sbjct: 89  FFLSLACNRSCYFCFNANQA-DYADRLRVNDAWRDEVDAFADACGGEVTHVGLTGGEPLL 147

Query: 157 LSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG---KPVYI-- 209
            + +       ++      H+++              ++  L+  L++AG     + I  
Sbjct: 148 HADESVMFCAYVRQRFPRAHIRLYTAG--------DFLDEPLLDRLRDAGLDELRMSIKL 199

Query: 210 -AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
                +   E  ++A+  ++R       ++ +  ++ G     E +  L+    ++ 
Sbjct: 200 DVFDVDRADEIIDDAVDVLARAKRFIPQVMMEMPVIPG---TGEAMRRLLDRLDQVG 253


>gi|157163980|ref|YP_001466045.1| molybdenum cofactor biosynthesis protein A [Campylobacter concisus
           13826]
 gi|166217240|sp|A7ZB87|MOAA_CAMC1 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|112801191|gb|EAT98535.1| molybdenum cofactor biosynthesis protein A [Campylobacter concisus
           13826]
          Length = 322

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 24/176 (13%)

Query: 89  IVHRYPDRIL----LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           ++ +Y  R++    + +   C   CR+C        + K  +L+ ++       +     
Sbjct: 2   LIDKY-GRVVDYLRISVTQRCNFRCRYCMPTTPFSWTPKENLLTFEEL-FLFVKVAIDEG 59

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           + ++  TGG+PL+     L   +K +   K    L   +         + P   + LK+A
Sbjct: 60  VKKIRITGGEPLVRKD--LDVFIKMISDYKPDIDLALTTNGF------MLPHFAKRLKDA 111

Query: 204 G-KPVYIA--------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           G K + ++                   E +A      +AG+ +   +V LKG NDD
Sbjct: 112 GLKRINMSLDTLNEQKAKFIAQKSVLHEVLAGFEAALDAGLKVKINTVALKGFNDD 167


>gi|91773564|ref|YP_566256.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM
           6242]
 gi|91712579|gb|ABE52506.1| Radical SAM protein with Cobalamin (vitamin B12)-binding domain
           [Methanococcoides burtonii DSM 6242]
          Length = 487

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 11/107 (10%)

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
            P    +N+      D      HS        YP    +     CP  C FC     V  
Sbjct: 194 FPALHLMNLEHYFGLDMSHGKRHSK-----RFYP----IITSRGCPAKCTFCT-AYRVWG 243

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
           +K    S ++    + Y++EK  I E++    D    + KR +K+  
Sbjct: 244 RKYRHRSPENVIEEMKYVKEKYNIEELLIE-DDNFTANPKRAEKICD 289


>gi|127514616|ref|YP_001095813.1| molybdenum cofactor biosynthesis protein A [Shewanella loihica
           PV-4]
 gi|126639911|gb|ABO25554.1| molybdenum cofactor biosynthesis protein A [Shewanella loihica
           PV-4]
          Length = 328

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 37/171 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPL 155
           L +   C   C +C   +     +  VLS ++    LA+I +   +  + ++  TGG+PL
Sbjct: 17  LSVTDRCDFRCVYCMSEDPCFLDREQVLSLEE----LAWIGQAFTELGVKKIRLTGGEPL 72

Query: 156 ILSH-KRLQKVLKTLRYIKHVQILRFHSRV--------------PIVDPQRINPELIQCL 200
           + +   +L K+L  L  +K + +    SR+                +    + PEL   L
Sbjct: 73  VRTDCDQLVKLLGQLPGLKELSMTTNGSRLSKFAGKMHEAGLSRLNISLDTLKPELFTQL 132

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
              G                E  I  I     AG   +   +V+L+G NDD
Sbjct: 133 TRNGN--------------LERVIQGIDAAKAAGFNRIKINAVILRGQNDD 169


>gi|212637405|ref|YP_002313930.1| Radical SAM [Shewanella piezotolerans WP3]
 gi|212558889|gb|ACJ31343.1| Radical SAM [Shewanella piezotolerans WP3]
          Length = 294

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 65/167 (38%), Gaps = 35/167 (20%)

Query: 97  ILLKLLHVCPVY-CRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           ++L++ + C    C FC      ++     +   V      +  L     ++ I  V   
Sbjct: 18  LILQVTNGCSWNQCSFCDMYTASQKRFRAQKIDKVE-----QELLKVSSSQAHISRVFLA 72

Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGK 205
            GD + L   RL+++   ++  +  V      +R+     P+ I    PE +Q L+E G 
Sbjct: 73  DGDAMTLPFARLEEICLLIKKYLPSV------TRISSYCLPRNINNKTPEQLQRLRELGL 126

Query: 206 PVYI---------AIHANHPYEFSEEAIAAISRLANAGI----ILLS 239
            +            +   +  E    ++AA+ ++  AGI    ++L+
Sbjct: 127 SLLYIGCESGDDEVLKRINKGETFASSLAALQKIKAAGIKSSVMILN 173


>gi|198276872|ref|ZP_03209403.1| hypothetical protein BACPLE_03077 [Bacteroides plebeius DSM 17135]
 gi|198270397|gb|EDY94667.1| hypothetical protein BACPLE_03077 [Bacteroides plebeius DSM 17135]
          Length = 438

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 7/120 (5%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C      G  +   +    T+A  A  +   +I       GD
Sbjct: 148 RTRYFLKVQDGCDYFCSYCTIPFARGRSRNGKIEDLVTQARQAAAEGGKEIVLTGVNIGD 207

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
               + +    ++K L  ++ ++  R  S    ++P  +  E+I+ + ++ +      H 
Sbjct: 208 FGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEYVAQSRR---FMPHF 260


>gi|170760017|ref|YP_001785664.1| radical SAM domain-containing protein [Clostridium botulinum A3
           str. Loch Maree]
 gi|169407006|gb|ACA55417.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 299

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 31/191 (16%)

Query: 99  LKLLHVCPVYCRFC-FRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG--DP 154
           + +   C   C +C  R E  G      V + K+    +     K +   VI TG   DP
Sbjct: 28  MNIYKGCCHGCIYCDSRSECYGIDNFDKVRAKKNAIQIIKNELRKKRKKGVIGTGAMSDP 87

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFH----SRV-PIVDPQRINPELIQCLKEAGKPVYI 209
                + L  +L  +  ++ +  L F     ++   +V     + ++++ +K     +  
Sbjct: 88  YNPFEREL--MLTRM-ALEEINTLNFGAAIATKSNLVVR----DIDILKKIKTYSPTLVK 140

Query: 210 AIHANHPYEFSEEAI----------AAISRLANAGI---ILLSQSVLLKGINDDPEILAN 256
                H  E  ++             AI +L+  GI   ILL    +L  IND+ E +  
Sbjct: 141 ITITTHDDELCKKVEPNVCVTSKRFQAIKQLSYNGIFTGILL--MPILPFINDNGENIVK 198

Query: 257 LMRTFVELRIK 267
           +++T  E   K
Sbjct: 199 IVKTAHECGAK 209


>gi|116753780|ref|YP_842898.1| radical SAM domain-containing protein [Methanosaeta thermophila PT]
 gi|116665231|gb|ABK14258.1| Radical SAM domain protein [Methanosaeta thermophila PT]
          Length = 383

 Score = 38.9 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 16/124 (12%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           +  + P  +++     CP  C +C+  E  GS   ++ + K+    L   ++        
Sbjct: 1   MQRKRPFHVMIIPTLGCPSKCSYCWSSEE-GSPVMSIDTVKEIVEWLKLFRDDPV--TFT 57

Query: 149 FTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQ----RINPELIQCLKEA 203
           F GG+PL+   +  +K L  L   + H+         P    Q    R+ PEL + LKE 
Sbjct: 58  FHGGEPLLAGVEFYRKALPLLADGLSHL--------TPSFALQTNLWRLTPELAEVLKEY 109

Query: 204 GKPV 207
             P+
Sbjct: 110 DVPI 113


>gi|296116145|ref|ZP_06834763.1| molybdenum cofactor biosynthesis protein A [Gluconacetobacter
           hansenii ATCC 23769]
 gi|295977251|gb|EFG84011.1| molybdenum cofactor biosynthesis protein A [Gluconacetobacter
           hansenii ATCC 23769]
          Length = 342

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 27/169 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C   +M    K  +LS ++ E   A     + +  +  TGG+PL+  
Sbjct: 22  VSVTDRCDMRCLYCMAEDMTFLPKPEILSYEELERICAAFI-HNGVRRIRVTGGEPLVRR 80

Query: 159 H-----KRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYI 209
                   + + L+       +  L      SR+          E    L  AG + V I
Sbjct: 81  DVMSFFSAMGEWLRRPVDEPRLDELTLTTNGSRL---------GEFAIPLHAAGVRRVNI 131

Query: 210 AIHANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGINDD 250
           ++ +  P  F+              +     AG+ +   +V + G+NDD
Sbjct: 132 SMDSLDPTRFATITRRGNLRKTLDGVRAAKEAGLKIRINAVAMAGLNDD 180


>gi|114617067|ref|XP_001149876.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
 gi|114617069|ref|XP_001149952.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
 gi|114617071|ref|XP_001150010.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
 gi|114617073|ref|XP_001150070.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes]
          Length = 644

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%)

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
           +  V       +  +     + Y+    +  E + +         K+L  +LK L     
Sbjct: 245 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 298

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
            ++ L   +  P   P+  +      L+  G    ++IH  H   F  E    +S L + 
Sbjct: 299 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSMLEDT 351

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
           G  L S+  +L  I D  E    L R   + +I   YL           G   F++  ++
Sbjct: 352 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 408

Query: 289 EGQKIVASLKE 299
               I+ ++K 
Sbjct: 409 RSLGIMQTVKG 419


>gi|329954832|ref|ZP_08295849.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides
           clarus YIT 12056]
 gi|328526936|gb|EGF53947.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides
           clarus YIT 12056]
          Length = 432

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  +      ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G D  +   + L ++++ +  I  V+ +R H   P   P     +L + ++E   
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLHYAYPAHFPM----DLFRVMRERPN 244


>gi|302348325|ref|YP_003815963.1| Radical SAM domain protein [Acidilobus saccharovorans 345-15]
 gi|302328737|gb|ADL18932.1| Radical SAM domain protein [Acidilobus saccharovorans 345-15]
          Length = 479

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 8/111 (7%)

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGS 120
           P  E+L+ LP    D +  + ++         P RI  +     CP  C +C      G 
Sbjct: 167 PFIEDLDKLPWPDRDLLDMDKYTLFN-----KPIRIAHVMASRGCPYGCMYCITSYYWGR 221

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           +     +    +  + Y+  + +  E++FT  D    + + +++ +  L+ 
Sbjct: 222 RYRYRSAKNVVDE-IEYLVNRYRAREIVFT-DDEFTANWRFVREFIAELKS 270


>gi|187925302|ref|YP_001896944.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phytofirmans
           PsJN]
 gi|229890466|sp|B2SYI5|MIAB_BURPP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|187716496|gb|ACD17720.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phytofirmans
           PsJN]
          Length = 457

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 26/138 (18%)

Query: 91  HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
           H  P R+      + ++  C  YC +C     V         S+  +  L  I       
Sbjct: 138 HLPPARVDGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192

Query: 144 IWEVIFTGGD------PLILSHKRLQ---KVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           + EV   G +       L L    +    ++++ +  I  ++ +R+ +      P+    
Sbjct: 193 VREVTLLGQNVNAYRAGLTLGSTEIADFAQLIEYVADIPGIERIRYTTSH----PKEFTQ 248

Query: 195 ELIQCLKEAGKPVYIAIH 212
            LI    +  K +   +H
Sbjct: 249 RLIDTYAKVPK-LVSHLH 265


>gi|304314308|ref|YP_003849455.1| MoaA related protein [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587767|gb|ADL58142.1| MoaA related protein [Methanothermobacter marburgensis str.
           Marburg]
          Length = 227

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 6/87 (6%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           I+  L   C + CR+CF             + +  +  L  I  +  I  V+  GG+P +
Sbjct: 14  IITVLTPTCNLRCRYCF---FTPRNCREYDAERIADRVLR-ISSEEGIDSVLIAGGEPTL 69

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSR 183
                L +  + L    HV I    +R
Sbjct: 70  QRD--LPEFTEALSRDLHVTISTNGTR 94


>gi|297568775|ref|YP_003690119.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296924690|gb|ADH85500.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 290

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 10/91 (10%)

Query: 95  DRILLKLLHVC-PVYCRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           D I+L++   C    C FC  +R E    +    +++      LA++    +    +   
Sbjct: 16  DSIILQVTVGCSHNRCTFCGTYRAEKFRLKDEATIAAD-----LAFVARHCRRQSRIFLA 70

Query: 151 GGDPLILSHKRLQKVLKTLR-YIKHVQILRF 180
            GD LIL  +RL+++L+ +R     V+ +R 
Sbjct: 71  DGDVLILPQERLRRLLQDIRQQAPWVKRVRL 101


>gi|300022130|ref|YP_003754741.1| radical SAM protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299523951|gb|ADJ22420.1| Radical SAM domain protein [Hyphomicrobium denitrificans ATCC
           51888]
          Length = 465

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 11/112 (9%)

Query: 69  ILPEEREDPIGDNN-HSPLKGIVHRY---PDRILLKLLHVCPVYCRFC--FRREMVGSQ- 121
           ++P     P+G+++      G++        R+    +  C  +C FC  +R     +Q 
Sbjct: 28  VMPWRDRRPLGEDDIADIWSGVLAECGPPRRRLAYIHVPFCANHCLFCGFYRNAYTPAQA 87

Query: 122 ---KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
                 +++  + E   A I+    I  V   GG P  LS   L ++++ +R
Sbjct: 88  ATYTDLLVAEIEREPGAAGIRHHP-IDAVYLGGGTPSALSASDLARIVEAVR 138


>gi|239827771|ref|YP_002950395.1| RNA modification enzyme, MiaB family [Geobacillus sp. WCH70]
 gi|239808064|gb|ACS25129.1| RNA modification enzyme, MiaB family [Geobacillus sp. WCH70]
          Length = 451

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 11/124 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
             R  LK+   C  +C FC      G  +        +  +  +       +I    I T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIRQAQQLVD--AGYKEIVLTGIHT 199

Query: 151 GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           GG    L       +L+ L   +  ++ LR  S    ++  +I  E+I+ L+ + K +  
Sbjct: 200 GGYGTDLKDYSFAALLRDLDEQVVGLKRLRISS----IEASQITDEIIEVLQRSDK-IVR 254

Query: 210 AIHA 213
            +H 
Sbjct: 255 HLHI 258


>gi|254501345|ref|ZP_05113496.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Labrenzia alexandrii
           DFL-11]
 gi|222437416|gb|EEE44095.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Labrenzia alexandrii
           DFL-11]
          Length = 486

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 24/123 (19%)

Query: 92  RYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           + P    L +   C  +C FC     R   V      +++     AA       S + EV
Sbjct: 174 KRPPAAFLTVQEGCDKFCTFCVVPYTRGAEVSRSVEQIVTEAQRMAA-------SGVREV 226

Query: 148 IFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQC 199
              G       G+    S   L K+L+ L  I  +  LR+ +  P     R ++ +LI+ 
Sbjct: 227 TLLGQNVNAYHGEAADGSTWGLGKLLRRLSEIDGLDRLRYTTSHP-----RDMDDDLIEA 281

Query: 200 LKE 202
            +E
Sbjct: 282 HRE 284


>gi|29653907|ref|NP_819599.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA
           493]
 gi|153208814|ref|ZP_01947041.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii 'MSU
           Goat Q177']
 gi|161830593|ref|YP_001596498.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella
           burnetii RSA 331]
 gi|165919097|ref|ZP_02219183.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA
           334]
 gi|212212941|ref|YP_002303877.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella
           burnetii CbuG_Q212]
 gi|212218810|ref|YP_002305597.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella
           burnetii CbuK_Q154]
 gi|81629338|sp|Q83DX3|MIAB_COXBU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890502|sp|B6J853|MIAB_COXB1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890503|sp|B6J1A4|MIAB_COXB2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890505|sp|A9NC58|MIAB_COXBR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|29541170|gb|AAO90113.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii RSA 493]
 gi|120575720|gb|EAX32344.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii 'MSU
           Goat Q177']
 gi|161762460|gb|ABX78102.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA
           331]
 gi|165917231|gb|EDR35835.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA
           334]
 gi|212011351|gb|ACJ18732.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii CbuG_Q212]
 gi|212013072|gb|ACJ20452.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii CbuK_Q154]
          Length = 439

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 19/125 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDP 154
             + ++  C  YC FC     V         S+  +  +A +    +  + E+   G + 
Sbjct: 148 AFVSIMEGCSKYCTFC-----VVPYTRGEEISRPFDDVIAEVASLCEQGVREITLLGQNV 202

Query: 155 ----LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                ++   +   L  ++  L  + +++ +RF +  P       +  LI    E  K +
Sbjct: 203 NDYRGLMHDGQVADLALLIHYLAAMDNIERIRFTTSHPSA----FSENLIDAYAEEPK-L 257

Query: 208 YIAIH 212
              +H
Sbjct: 258 ANHLH 262


>gi|297250097|ref|ZP_06933798.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
 gi|297173966|gb|EFH33330.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus
           bv. 5 str. B3196]
          Length = 458

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 41/164 (25%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
            D  L   +  C   C +C           T ++ KD    L Y+     +I        
Sbjct: 54  QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-RPILDYLDVLHKEIEMIARQRG 104

Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
                 E+ F GG P I+    L  ++  LR        R       +    +DP+R+ P
Sbjct: 105 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 157

Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           E+   L  +G     + +       F  +   AI+R+  A   L
Sbjct: 158 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 196


>gi|113431887|emb|CAJ31889.1| putative oxydoreductase [Streptococcus thermophilus]
          Length = 399

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 7/98 (7%)

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK- 141
            S   G++ +    +++ + + C + C +C+           ++     +  +  I  K 
Sbjct: 35  DSVEDGVLKK----VVINISNSCNLSCSYCYADGGNYGMDNRIMDLTTADNIIQEIASKG 90

Query: 142 -SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            +QI  +I  GG+P  L+ +     ++ L  + +V  +
Sbjct: 91  VTQINRLILFGGEPF-LNIELFIYFIEKLSTLLNVVKI 127


>gi|55821919|ref|YP_140361.1| hypothetical protein stu1951 [Streptococcus thermophilus LMG 18311]
 gi|55823837|ref|YP_142278.1| hypothetical protein str1951 [Streptococcus thermophilus CNRZ1066]
 gi|55737904|gb|AAV61546.1| conserved hypothetical protein [Streptococcus thermophilus LMG
           18311]
 gi|55739822|gb|AAV63463.1| conserved hypothetical protein [Streptococcus thermophilus
           CNRZ1066]
          Length = 424

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 7/98 (7%)

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK- 141
            S   G++ +    +++ + + C + C +C+           ++     +  +  I  K 
Sbjct: 60  DSVEDGVLKK----VVINISNSCNLSCSYCYADGGNYGMDNRIMDLTTADNIIQEIASKG 115

Query: 142 -SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            +QI  +I  GG+P  L+ +     ++ L  + +V  +
Sbjct: 116 VTQINRLILFGGEPF-LNIELFIYFIEKLSTLLNVVKI 152


>gi|62318012|ref|YP_223865.1| coproporphyrinogen III oxidase [Brucella abortus bv. 1 str. 9-941]
 gi|83269988|ref|YP_419279.1| coproporphyrinogen III oxidase [Brucella melitensis biovar Abortus
           2308]
 gi|189023264|ref|YP_001933005.1| coproporphyrinogen III oxidase [Brucella abortus S19]
 gi|254691555|ref|ZP_05154809.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|254695149|ref|ZP_05156977.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
 gi|254698249|ref|ZP_05160077.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254731692|ref|ZP_05190270.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|256256741|ref|ZP_05462277.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|260544199|ref|ZP_05820020.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus NCTC 8038]
 gi|260757180|ref|ZP_05869528.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|260759451|ref|ZP_05871799.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|260762695|ref|ZP_05875027.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882988|ref|ZP_05894602.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|261215505|ref|ZP_05929786.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
 gi|62198205|gb|AAX76504.1| HemN-2, oxygen-independent coproporphyrinogen III oxidase [Brucella
           abortus bv. 1 str. 9-941]
 gi|82940262|emb|CAJ13327.1| Oxygen-independent coproporphyrinogen III oxidase HemN:Elongator
           protein 3/MiaB/NifB:Radical SAM [Brucella melitensis
           biovar Abortus 2308]
 gi|189021838|gb|ACD74559.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus S19]
 gi|260097470|gb|EEW81344.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella
           abortus NCTC 8038]
 gi|260669769|gb|EEX56709.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292]
 gi|260673116|gb|EEX59937.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260677288|gb|EEX64109.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870]
 gi|260872516|gb|EEX79585.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68]
 gi|260917112|gb|EEX83973.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya]
          Length = 450

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 41/164 (25%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145
            D  L   +  C   C +C           T ++ KD    L Y+     +I        
Sbjct: 46  QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-RPILDYLDVLHKEIEMIARQRG 96

Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194
                 E+ F GG P I+    L  ++  LR        R       +    +DP+R+ P
Sbjct: 97  RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 149

Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237
           E+   L  +G     + +       F  +   AI+R+  A   L
Sbjct: 150 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 188


>gi|322807650|emb|CBZ05225.1| putative SAM methylase domain protein [Clostridium botulinum H04402
           065]
          Length = 715

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 11/78 (14%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WEVI--FTG 151
           +   L   C + C++C+    V      V+S    + A+ YI +   I     VI  F G
Sbjct: 22  VTFILTQDCNLRCKYCYE---VNKNNQNVMSFGTAKKAIDYILDNHDIFTSKAVIWDFIG 78

Query: 152 GDPLI---LSHKRLQKVL 166
           G+PL+   L  K +  ++
Sbjct: 79  GEPLLEIDLMDKIIDYIM 96


>gi|309781163|ref|ZP_07675900.1| molybdenum cofactor biosynthesis protein A [Ralstonia sp.
           5_7_47FAA]
 gi|308919984|gb|EFP65644.1| molybdenum cofactor biosynthesis protein A [Ralstonia sp.
           5_7_47FAA]
          Length = 373

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +++            +LS ++ E       E   + ++  TGG+
Sbjct: 48  ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMARLFIEH-GVEKIRLTGGE 106

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+     ++++++ L  +
Sbjct: 107 PLLRKD--IERLVEKLARL 123


>gi|306821141|ref|ZP_07454757.1| pyruvate formate-lyase activating enzyme [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550834|gb|EFM38809.1| pyruvate formate-lyase activating enzyme [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 167

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C   C  CF ++    + G   + +  +  ++Y+ E  +I  +   GG+PL  ++  +
Sbjct: 24  SGCTHNCFNCFNKDYQNFEYGNEFTQRQIDEIISYMSED-EIAGLTILGGEPLQQNYDDM 82

Query: 163 QKVLKTLR 170
              LK +R
Sbjct: 83  IDFLKQVR 90


>gi|291458400|ref|ZP_06597790.1| pyruvate formate-lyase 1-activating enzyme [Oribacterium sp. oral
           taxon 078 str. F0262]
 gi|291418933|gb|EFE92652.1| pyruvate formate-lyase 1-activating enzyme [Oribacterium sp. oral
           taxon 078 str. F0262]
          Length = 269

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 45/204 (22%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           P    L  L  C + CR+C             +    +    + A  Y +   +   +  
Sbjct: 41  PGTRFLIFLKGCAMRCRYC---HNPDTWDYHSEDMRSADSLLDQAERYREYWGEDGGITV 97

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILR-FHS-----------RVPIVDP----QRIN 193
           +GGDPLI     L ++ +  +        R  ++           + P         ++ 
Sbjct: 98  SGGDPLIQIDFVL-QLFEEAKR-------RGINTCLDTSAQPFTRKKPFFGKFTKLMKLT 149

Query: 194 PELIQCLKE--AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
             ++  +KE  + K  ++    N      E  +     L+  G+ +  + VL+ G+ D  
Sbjct: 150 DTVLLDIKEIDSRKHRWLTGWGN------ENILDCARYLSETGVPVWIRHVLVPGVTDRD 203

Query: 252 EILANL------MRTFVELRIKPY 269
           E L +L      +    ++ I PY
Sbjct: 204 EELRSLKSFIDSLHNVKKVEILPY 227


>gi|290958805|ref|YP_003489987.1| hypothetical protein SCAB_43781 [Streptomyces scabiei 87.22]
 gi|260648331|emb|CBG71442.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 293

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 69/192 (35%), Gaps = 26/192 (13%)

Query: 98  LLKLLHVCPVYCRFCFRR---EMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWE--- 146
           ++     C + C +CF        G           +     E A   + +  Q      
Sbjct: 23  VINPYTGCVLGCAYCFASFAGRQFGRSVKEWGDYLYVKKNAVELARTELAKMPQDKRQGT 82

Query: 147 -VIFTGGDPLILSHK--RL-QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            ++ +  DP        RL + +L+ L+ + +  ++R  ++ P+V   R + +L+  L  
Sbjct: 83  MLLSSVTDPYQGHETQYRLTRGILRELQAVGYPGLVRILTKSPVVT--R-DIDLLTGLPR 139

Query: 203 AGKPVYIAIH---ANHPYEF-SEEAIAAISRLA---NAGIILLS-QSVLLKGINDDPEIL 254
           A   + +       +   E  +  A   +  LA    AGI   +    LL      PE+L
Sbjct: 140 AEVGMTVTTSDDKVSRWLEVRAPLASRRLRTLAELNEAGIPTYAFVGPLLPHFATQPELL 199

Query: 255 ANLMRTFVELRI 266
            +L    VE  +
Sbjct: 200 DDLFGQLVEAGV 211


>gi|269118813|ref|YP_003306990.1| MiaB-like tRNA modifying enzyme [Sebaldella termitidis ATCC 33386]
 gi|268612691|gb|ACZ07059.1| MiaB-like tRNA modifying enzyme [Sebaldella termitidis ATCC 33386]
          Length = 430

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 23/146 (15%)

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
               +S  K  V R   R  +K+   C  +C +C            +  S+  E+ L  I
Sbjct: 126 DQKEYSSQKYAVSRDKARAFVKIQDGCTKFCSYCKI-----PYARGMSRSRQPESVLEEI 180

Query: 139 Q--EKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188
           +   ++   E++ TG +   LS        +     +L+ +  I+ +  +R  S    V 
Sbjct: 181 KFLGEAGYKEIVVTGIN---LSEYGSDFGENINFDYILEKILKIEEIDRVRVSS----VY 233

Query: 189 PQRINPELIQCLKEAGKPVYIAIHAN 214
           P  ++ + I  LKE  K +   +H +
Sbjct: 234 PDTLSEKFISLLKE-NKKLMPHLHVS 258


>gi|170291224|ref|YP_001738040.1| radical SAM domain-containing protein [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170175304|gb|ACB08357.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 498

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 15/112 (13%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           ++ LL++   C   CRFC        +    ++  +   A+ Y        E+   G D 
Sbjct: 181 NKFLLEISRGCGWGCRFCGMGWHWRPRLDAPMN--EVREAIEY-ASDLGFREIFIIGSDA 237

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRV--PIVDPQRINPELIQCLKEAG 204
                   + +  TL  I          +   P +   +++ EL+  ++  G
Sbjct: 238 ASS-----KAIKDTLWEIAE-----IGLKASTPSIRADQVDVELLDLIRSTG 279


>gi|168179004|ref|ZP_02613668.1| radical SAM superfamily protein [Clostridium botulinum NCTC 2916]
 gi|226950767|ref|YP_002805858.1| radical SAM domain-containing protein [Clostridium botulinum A2
           str. Kyoto]
 gi|182670221|gb|EDT82197.1| radical SAM superfamily protein [Clostridium botulinum NCTC 2916]
 gi|226844406|gb|ACO87072.1| radical SAM domain protein [Clostridium botulinum A2 str. Kyoto]
          Length = 715

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 11/78 (14%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WEVI--FTG 151
           +   L   C + C++C+    V      V+S    + A+ YI +   I     VI  F G
Sbjct: 22  VTFILTQDCNLRCKYCYE---VNKNNQNVMSFGTAKKAIDYILDNHDIFTSKAVIWDFIG 78

Query: 152 GDPLI---LSHKRLQKVL 166
           G+PL+   L  K +  ++
Sbjct: 79  GEPLLEIDLMDKIIDYIM 96


>gi|164688504|ref|ZP_02212532.1| hypothetical protein CLOBAR_02149 [Clostridium bartlettii DSM
           16795]
 gi|164602917|gb|EDQ96382.1| hypothetical protein CLOBAR_02149 [Clostridium bartlettii DSM
           16795]
          Length = 445

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 16/121 (13%)

Query: 92  RYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           RY         LK+   C   C +C   ++ G  +   +  +D  A    + E+  + E+
Sbjct: 138 RYVSTPSHMAYLKIGEGCDNKCTYCIIPKLRGKYRSRKM--EDIIAEAKKLAER-GVKEL 194

Query: 148 IFTGGD----PLIL-SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           +    D     L L   ++L  +L+ L  I+  + +R    V    P+ I  EL++ +K+
Sbjct: 195 VVIAQDTTKYGLDLYGEEKLANLLEELAQIEGFKWIR----VMYSYPESITEELVKVIKK 250

Query: 203 A 203
            
Sbjct: 251 Y 251


>gi|58039893|ref|YP_191857.1| putative oxidoreductase [Gluconobacter oxydans 621H]
 gi|58002307|gb|AAW61201.1| Putative oxidoreductase [Gluconobacter oxydans 621H]
          Length = 400

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 11/125 (8%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R LL++   C   C FC      G  + T +       A A ++   Q  E++ TG D  
Sbjct: 111 RALLQVQQGCDHRCTFCIIPYGRGDSRSTPV-EDAIARAEALVEAGHQ--EIVLTGVD-- 165

Query: 156 ILSH-----KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           I S      K L  + +  LR +  V+ LR  S  P++   +     +  L E    +  
Sbjct: 166 IASWQGSGGKGLGALCRELLRRVDGVRRLRLSSIDPVLLDAQTGDADLWWLLENEPRLMP 225

Query: 210 AIHAN 214
            +H +
Sbjct: 226 HLHLS 230


>gi|20094976|ref|NP_614823.1| molybdenum cofactor biosynthesis protein [Methanopyrus kandleri
           AV19]
 gi|24211984|sp|Q8TV60|MOAA_METKA RecName: Full=Probable molybdenum cofactor biosynthesis protein A
 gi|19888230|gb|AAM02753.1| Molybdenum cofactor biosynthesis enzyme [Methanopyrus kandleri
           AV19]
          Length = 307

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           + + +   C + C +C R  E  G  +   LS+ +    L    E   + +V  TGG+PL
Sbjct: 12  VRISVTMRCNMACVYCHREGERPGRSE---LSAAEWGRLLRACAE-IGVRKVKITGGEPL 67

Query: 156 ILSHKRLQKVLKTLRYIKHVQILR 179
           +     L ++++     + V ++ 
Sbjct: 68  LRRD--LIEIIENAEGFEEVSLVT 89


>gi|330836973|ref|YP_004411614.1| MiaB-like tRNA modifying enzyme [Spirochaeta coccoides DSM 17374]
 gi|329748876|gb|AEC02232.1| MiaB-like tRNA modifying enzyme [Spirochaeta coccoides DSM 17374]
          Length = 453

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 12/128 (9%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            R  LK+   C   C FC  R  V   K   L++ +    + ++ E+    EV+ TG + 
Sbjct: 164 QRAYLKVQDGCDNACAFC--RVHVARGKAVDLNADEVVRRVMHL-ERQGFHEVVLTGVN- 219

Query: 155 LIL---SHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           L +     + L  +++  L +I     +R  S    ++P  ++  L+  L +     Y  
Sbjct: 220 LTMYGYKGEGLGALVEKILEHIGSDMRIRLSS----LEPDHVDGRLLDTLHDPRMQPYFH 275

Query: 211 IHANHPYE 218
           I      +
Sbjct: 276 IPVQSANQ 283


>gi|300728421|ref|ZP_07061783.1| translation initiation factor IF-1 [Prevotella bryantii B14]
 gi|299774340|gb|EFI70970.1| translation initiation factor IF-1 [Prevotella bryantii B14]
          Length = 72

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ +E G +IV      ISG  +  YI  LPG   KV++  +++ K   G     
Sbjct: 22  FRVELENGVQIV----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70


>gi|328698428|ref|XP_001952088.2| PREDICTED: molybdenum cofactor biosynthesis protein 1-like isoform
           1 [Acyrthosiphon pisum]
          Length = 546

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/225 (16%), Positives = 92/225 (40%), Gaps = 35/225 (15%)

Query: 92  RYPDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R  + + + L   C + C +C   +    S++  +LS+ +    ++   ++  + ++  T
Sbjct: 33  RKHNYLRVSLTERCNLRCEYCMPLKGAKLSEQSKLLSNNEIVRLVSLFAKQ-GVDKIRIT 91

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P +     + +++++LR I+ ++ +   +         +   L+  L+ AG    + 
Sbjct: 92  GGEPTVKKD--IIQIVESLRDIRKLKTIAMTTNGLT-----LTKHLVD-LQRAGLN-ALN 142

Query: 211 IHANHPYE-----FSEEAIAAISRLANAGIILLSQ---------SVLLKGINDDPEILAN 256
           +  +   E      +      + R+  AGI L  Q          VL++GIN   + L +
Sbjct: 143 VSLDTLQENTYGKITRRDGRLLKRVL-AGIDLALQLGFSPVKVNCVLMRGIN--FDELGD 199

Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEG-QKIVAS 296
            +    + +I   Y     +    + +     +  +E  ++I+ S
Sbjct: 200 FVEMTRDRKIN--YRFIEFMPFSMNDWEEKRMVPYKEAIREIMKS 242


>gi|329957659|ref|ZP_08298134.1| tRNA methylthiotransferase YqeV [Bacteroides clarus YIT 12056]
 gi|328522536|gb|EGF49645.1| tRNA methylthiotransferase YqeV [Bacteroides clarus YIT 12056]
          Length = 445

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 14/140 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  YC +C        +      +   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYYCSYCTI-PFARGRSRNGSIASLVEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  + +     
Sbjct: 205 IGDFGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIKFVSRSKR---FM 257

Query: 211 IHANHP-YEFSEEAIAAISR 229
            H + P    S+E +  + R
Sbjct: 258 PHFHIPLQSGSDEVLKLMRR 277


>gi|296166708|ref|ZP_06849133.1| radical SAM domain protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
 gi|295897973|gb|EFG77554.1| radical SAM domain protein [Mycobacterium parascrofulaceum ATCC
           BAA-614]
          Length = 516

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 76/207 (36%), Gaps = 35/207 (16%)

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-----E 116
           P K  +   P    DP+       L  +  ++   +L  +   C + C  CF        
Sbjct: 81  PTKAHVPDAPG-NFDPVPSAYLQGLPQMQTQHTCILLEDIAATCNLRCPTCFADSSPDLR 139

Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
            V +    + +     A     +E  ++  V+ +GG+P +    +L ++L  L       
Sbjct: 140 DVVAVGDVLANVDQRLA-----RENGRLDVVMLSGGEPTLHP--QLPELLAELSSRP--- 189

Query: 177 ILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHAN--------HPY--EFSEEAI 224
           I R    +   +  RI  + EL+  L E  +   + +  +        H    + S    
Sbjct: 190 ITRI---LLNTNGVRIAHDDELLDLLTEHRERAEVYLQYDGLSPAAHRHHRGGDLSRVKR 246

Query: 225 AAISRLANAGIILLSQSVLLK--GIND 249
           AA+ RL++    + +  V+    G+ND
Sbjct: 247 AALRRLSDR--EIFTTLVMTAALGVND 271


>gi|317132121|ref|YP_004091435.1| protein of unknown function DUF512 [Ethanoligenens harbinense
           YUAN-3]
 gi|315470100|gb|ADU26704.1| protein of unknown function DUF512 [Ethanoligenens harbinense
           YUAN-3]
          Length = 436

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 36/163 (22%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           +  L+     C  +C FCF  ++    + T+    D +A L+++     I     T  D 
Sbjct: 77  ETYLMDKKRRCQNHCVFCFIDQLPKGLRKTLYFKDD-DARLSFLMGN-YITLTNLTEQDV 134

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
                + +   +  +        +  H+  P +            ++  G         +
Sbjct: 135 ----DRIIDMHISPI-------NVSVHTTNPAL-----------RVRMMGN--------S 164

Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
           H  E    A+    RLA AG  L  Q VL  G+ND  E+  +L
Sbjct: 165 HAGE----ALVHFYRLAEAGTKLNCQLVLCPGLNDGAELARSL 203


>gi|160934421|ref|ZP_02081808.1| hypothetical protein CLOLEP_03294 [Clostridium leptum DSM 753]
 gi|156867094|gb|EDO60466.1| hypothetical protein CLOLEP_03294 [Clostridium leptum DSM 753]
          Length = 329

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 56/161 (34%), Gaps = 23/161 (14%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDP 154
                   CP  C FC ++ + G  +           E A   ++ K +  E+ F GG  
Sbjct: 2   AFFIPHAGCPHQCSFCDQKSITGESRRVEPGEVAAVLEDARQALRGKQKASEIAFFGGSF 61

Query: 155 LILSHKRLQKVLKTLRYIKHVQI-----LRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
             +     + +LK       V+      +R  +R     P  I+P +++ LK+ G K + 
Sbjct: 62  TAVPPAYQESLLKAAY--PFVKRGDFSGIRISTR-----PDAIDPPVLERLKQYGVKSIE 114

Query: 209 IAIH--------ANHPYEFSEEAIAAISRLANAGIILLSQS 241
           +            N     +++ + A   +   G  L  Q 
Sbjct: 115 LGAQSMDDRVLVLNQRGHTAQDVVNASRMIREYGFSLGLQM 155


>gi|126731382|ref|ZP_01747189.1| radical SAM domain protein [Sagittula stellata E-37]
 gi|126708293|gb|EBA07352.1| radical SAM domain protein [Sagittula stellata E-37]
          Length = 329

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 61/155 (39%), Gaps = 14/155 (9%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGG 152
           P  +      +C + C  C+      +     +++ + E+ L  ++++   + E+ FTGG
Sbjct: 46  PQTLWFNTGTLCNITCANCYIESSPENDSLVYITTAEVESYLDQLEDRDWGVREIGFTGG 105

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           +P  ++ + +      L     V IL    R P++ P  +   L +   E G  + + I 
Sbjct: 106 EPF-MNPEMIAMTRAALERGYEVLILTNAMR-PMMRP-HVQRGLRELQAEHGDRLNLRIS 162

Query: 213 ANH--PYEFSEE--------AIAAISRLANAGIIL 237
            +H    +   E         I  +  L + GI +
Sbjct: 163 LDHYSASQHDAERGAGSFAKTIEGMRWLRDEGIRM 197


>gi|325846594|ref|ZP_08169509.1| iron-only hydrogenase maturation rSAM protein HydG [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
 gi|325481352|gb|EGC84393.1| iron-only hydrogenase maturation rSAM protein HydG [Anaerococcus
           hydrogenalis ACS-025-V-Sch4]
          Length = 474

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 6/121 (4%)

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCF 113
           Q +  ++   +L  + ED + +   S  K +  + Y +RI+L       + C   C +C 
Sbjct: 48  QGLSHRDAFVLLSCQEED-LNEEIFSLAKKLKEKFYGNRIVLFAPLYLSNYCVNGCLYCP 106

Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
                 +     LS  +    +  +Q+       + TG DP+    + + + +KT+  IK
Sbjct: 107 YHAKNKTIPRRKLSQDEIRKEVIALQDLGHKRLALETGEDPVNNPIEYVLESIKTIYSIK 166

Query: 174 H 174
           H
Sbjct: 167 H 167


>gi|322382952|ref|ZP_08056784.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
 gi|321153072|gb|EFX45530.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae
           subsp. larvae B-3650]
          Length = 510

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 69/186 (37%), Gaps = 25/186 (13%)

Query: 58  RQFIPQKEELNILP--EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FR 114
           RQF+ ++  L   P  +   D I +     +  + H   +  L   +  CP  C +C F 
Sbjct: 138 RQFL-KEHYLVTRPKADLLMD-IAERQLKVIPDLFHLDHEVSLYIGIPFCPTKCAYCTFP 195

Query: 115 REMVGSQKGTVLS-----SKDTEAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKT 168
              +    G+V +      ++      +++     I  + + GG P  L  + +  + +T
Sbjct: 196 AYDIQGNNGSVHAFLEGLHEEIRLTGEWLKRHGMGITTIYWGGGTPTSLEAEDMDALFRT 255

Query: 169 ----LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEA 223
               L  +  V+ L     V    P  I P+ ++ +K      + I      P  F++  
Sbjct: 256 MQKHLPQMDKVRELT----VEAGRPDTITPDKLEVMKRWDVDRISIN-----PQSFTQLT 306

Query: 224 IAAISR 229
           +  I R
Sbjct: 307 LDTIGR 312


>gi|312898407|ref|ZP_07757797.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
 gi|310620326|gb|EFQ03896.1| radical SAM domain protein [Megasphaera micronuciformis F0359]
          Length = 217

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 6/82 (7%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            L      C + C +C       ++       +  +  + Y   +  + ++  TGG+PL+
Sbjct: 21  ALFIRFQGCNLSCTYCDTAW--ANEADCPYEEESPQEIVDY-ACREGVTDITLTGGEPLL 77

Query: 157 LSHKRLQKVLKTLRYIK-HVQI 177
              + + +++  L     HV+I
Sbjct: 78  --QEGIDELIDLLSKHGFHVEI 97


>gi|289523143|ref|ZP_06439997.1| glutamate 5-kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503686|gb|EFD24850.1| glutamate 5-kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 329

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 58/181 (32%), Gaps = 42/181 (23%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L      C + C FC    +        LS  D    L+ +++ + +  V FT  +PLI
Sbjct: 73  VLSLGSVGCNMRCPFCQNWHISTWSPQIKLSRIDPLELLSLVKKYN-VTAVAFTYNEPLI 131

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-----QRINPELIQC------------ 199
                L+ +   L   ++V+++   + +    P      RI+   +              
Sbjct: 132 SYEYLLEAI--PLLKKENVKVVLVTNGLINTLPLKEIAHRIDAANVDLKTFNEETYKKLG 189

Query: 200 --LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
             LK   K + I    N   E +                      L+ GINDD      L
Sbjct: 190 GDLKTVLKTLQILKSFNVHIEITHL--------------------LVTGINDDLGEFEAL 229

Query: 258 M 258
            
Sbjct: 230 C 230


>gi|257064347|ref|YP_003144019.1| iron-only hydrogenase maturation protein HydE [Slackia
           heliotrinireducens DSM 20476]
 gi|256792000|gb|ACV22670.1| iron-only hydrogenase maturation protein HydE [Slackia
           heliotrinireducens DSM 20476]
          Length = 351

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            R L+++ + C   C +C  R    S     L+     A      E      V+  G DP
Sbjct: 56  TRGLIEVSNFCKNDCLYCGIRRSNRSCHRYRLAVDQILACADVGYEVGFRTFVLQGGEDP 115

Query: 155 LILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
              + +R+   ++ L+  +H      L    R P         E  Q L+EAG   Y+  
Sbjct: 116 WF-TDERVCDCVRRLKQ-RHPDCAVTLSLGERSP---------ESYQALREAGADRYLLR 164

Query: 212 HAN---------HPYEFSEEAIAAI-SRLANAGIILLS 239
           H           HP + S +A  A    L  AG  +  
Sbjct: 165 HETATPGHYARLHPADMSWDARMACLYSLREAGFTVGC 202


>gi|225848259|ref|YP_002728422.1| molybdenum cofactor biosynthesis protein A [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225643519|gb|ACN98569.1| molybdenum cofactor biosynthesis protein A [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 321

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C    M       +L  ++    +  + +   + +V  TGG+PL+  
Sbjct: 8   ISVTDKCNLKCFYCRPDNMEFIPHDEILRYEEIAKLVKAMTKY-GLKKVRITGGEPLV-- 64

Query: 159 HKRLQKVLKTLRYIKHVQIL 178
             +++ ++  L+ I  ++ +
Sbjct: 65  RPQIENLVSLLKSIPQIEDI 84


>gi|196234696|ref|ZP_03133509.1| molybdenum cofactor biosynthesis protein A [Chthoniobacter flavus
           Ellin428]
 gi|196221244|gb|EDY15801.1| molybdenum cofactor biosynthesis protein A [Chthoniobacter flavus
           Ellin428]
          Length = 337

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 31/169 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDP 154
           + +   C   C +C  +E+ G     +   +       A LA I  +    ++  TGG+P
Sbjct: 18  ISVTDRCNFRCTYCMPKEVFGHGYDFLPKEEVLTFEEIARLARIFVELGAEKLRLTGGEP 77

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF---HSRVP--------IVDPQRIN---PELIQCL 200
             L  + L +++  L  I+ V  L      SR+             QR+      L    
Sbjct: 78  -TLR-RELHRLVSELAAIRGVHDLTLTTNGSRLVEEARNLRNAGL-QRLTVSVDALDDVT 134

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGIN 248
             A   V   +H           +  I     AG   +    V+ +G+N
Sbjct: 135 FRAMNDVSFPVH---------RVLRGIEAAREAGFAPIKINMVVKRGVN 174


>gi|187939873|gb|ACD39011.1| helicase-related protein [Pseudomonas aeruginosa]
          Length = 1126

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 4/47 (8%)

Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
           S     +I R+  AG    +Q+VL +G ND    L+ L +    L I
Sbjct: 540 SAALAESIERMRAAGFSYRNQAVLCRG-ND---KLSELGQELERLGI 582


>gi|218782637|ref|YP_002433955.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
 gi|218764021|gb|ACL06487.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01]
          Length = 353

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 20/147 (13%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVL--SSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           +      CP  C FC +R + G+ +      +  + E  L++ ++      + F GG+ L
Sbjct: 12  IFLPHAGCPHQCVFCNQRAITGAARPFSAEDARAEVERYLSFPRKSKGPTIISFYGGNFL 71

Query: 156 ILSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211
            +S KR++ +L       +   V  +RF +R     P  ++P  +  L+    K V + +
Sbjct: 72  GISRKRIRDLLDLASQYVNQGRVDGIRFSTR-----PDTVSPLSLSLLEGYPVKTVELGV 126

Query: 212 HANHPYEFSEEAIAAISRLANAGIILL 238
                    EE + A  R    G  +L
Sbjct: 127 -----QSMDEEVLEASRR----GHTVL 144


>gi|124486075|ref|YP_001030691.1| GTP cyclohydrolase subunit MoaA [Methanocorpusculum labreanum Z]
 gi|124363616|gb|ABN07424.1| GTP cyclohydrolase subunit MoaA [Methanocorpusculum labreanum Z]
          Length = 319

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 28/169 (16%), Positives = 62/169 (36%), Gaps = 31/169 (18%)

Query: 99  LKLLHVCPVYCRFCFRREM-----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C + C +C R              + ++ ++    +    E   +  +  TGG+
Sbjct: 24  IAVTSACDLRCIYCHREGEGDNGCTRDDHASQMTKEEISELIGVFAE-LGVKTIKLTGGE 82

Query: 154 PLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           PL+        +L  +R I  H++           +   +  +L + LK+AG    + + 
Sbjct: 83  PLLRPD-----LLDIIRSIPPHIE------SSLTTNGTHL-AKLAKELKDAGLS-RVNVS 129

Query: 213 ANHPYE-----FSE-----EAIAAISRLANAGI-ILLSQSVLLKGINDD 250
            +          +      + +  I     AG+  +    V+LKG+ND+
Sbjct: 130 LDTMNRDTYIKITGKDRLKDVLDGIDAALAAGLTPVKLNMVVLKGMNDN 178


>gi|26988695|ref|NP_744120.1| molybdenum cofactor biosynthesis protein A, putative [Pseudomonas
           putida KT2440]
 gi|24983483|gb|AAN67584.1|AE016388_4 molybdenum cofactor biosynthesis protein A, putative [Pseudomonas
           putida KT2440]
          Length = 337

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C +C    + +V +Q    LS+      +AY+ E + I  +  TGG+PL+
Sbjct: 30  VSLTAACNYACTYCVPDGKRLVAAQDE--LSADALARGVAYLIEAAGIERLRITGGEPLV 87

Query: 157 LSHKRLQKVLKTLRYIK 173
               RL   +  +  + 
Sbjct: 88  SP--RLDAFMAAVAKLD 102


>gi|189500687|ref|YP_001960157.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium
           phaeobacteroides BS1]
 gi|189496128|gb|ACE04676.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium
           phaeobacteroides BS1]
          Length = 424

 Score = 38.9 bits (90), Expect = 1.2,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 64/190 (33%), Gaps = 46/190 (24%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQE----KSQIWEVI 148
            RI L +   C + C +C R+    ++    ++S+      AL Y+ +       I  V 
Sbjct: 20  GRIHLPVAPKCNIQCNYCNRKFDCLNENRPGVTSRVLSPHQALHYLDQALELSPNIAVVG 79

Query: 149 FTG-GDPL-----ILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
             G GDP       ++  RL  +K  + L  +         S    V P     E +  L
Sbjct: 80  IAGPGDPFANPEETMTTLRLVREKYPEMLLCV--------ASNGLNVLPY---IEELAEL 128

Query: 201 KEAGKPVYIAI-----------HANHPYEFSEEAI----------AAISRLANAGIILLS 239
           K +   + I                H  +   +             A+ +L   G+    
Sbjct: 129 KVSHVTLTINAIDPEIGAEIYAWVRHGKKVFRDVAGAELLLKNQLEALKKLKELGVTAKV 188

Query: 240 QSVLLKGIND 249
            S+++ GIND
Sbjct: 189 NSIIIPGIND 198


>gi|187734933|ref|YP_001877045.1| radical SAM enzyme, Cfr family [Akkermansia muciniphila ATCC
           BAA-835]
 gi|205829710|sp|B2UNF2|RLMN_AKKM8 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|187424985|gb|ACD04264.1| radical SAM enzyme, Cfr family [Akkermansia muciniphila ATCC
           BAA-835]
          Length = 359

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 53/211 (25%)

Query: 93  YPDRILLKLLHV--CPVYCRFC------FRREMVGSQK-GTVLSSKDTEAALAYIQEKSQ 143
             +R+ L +     C   C+FC       +R +   +  G +LS++             +
Sbjct: 107 KSERVTLCVSSQVGCAFGCKFCASGLLGLKRHLTTGEIIGQILSAEAI--------AGKR 158

Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           +  ++F G G+PL         +   L  I   + L   +R   +      P L + L  
Sbjct: 159 VNNIVFMGMGEPL----SNFDNLADALEIITSHRGLEIGARHITISTSGFVPGL-KKLAA 213

Query: 203 AGKPV--YIAIHANHPYEFSEEAIAAISRLANAGIIL-------------LSQSV----- 242
             + +   +++H       ++E    I    N    L              +Q       
Sbjct: 214 YPRQIRLAVSLHG-----ATDEVRDQIMP-VNKKWPLSQLIPALEEWNRGRNQMPTLEYI 267

Query: 243 LLKGINDDPEILANLMR---TFV-ELRIKPY 269
           L++ IND P+  ++L+R       ++ + PY
Sbjct: 268 LIRDINDSPKDASHLVRIAKRLHAKVNLIPY 298


>gi|329907318|ref|ZP_08274630.1| Molybdenum cofactor biosynthesis protein A [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547006|gb|EGF31898.1| Molybdenum cofactor biosynthesis protein A [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 371

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 8/80 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+         +  +LS ++         +   I ++  TGG+
Sbjct: 44  ISVTDRCNFRCVYCMPKELFDKDYQFLPQTALLSFEEITRMARIFIDH-GIEKIRLTGGE 102

Query: 154 PLILSHKRLQKVLKTLRYIK 173
           PL+   K L+K+++ L  +K
Sbjct: 103 PLL--RKHLEKLIEMLSRLK 120


>gi|312128061|ref|YP_003992935.1| molybdenum cofactor biosynthesis protein a [Caldicellulosiruptor
           hydrothermalis 108]
 gi|311778080|gb|ADQ07566.1| molybdenum cofactor biosynthesis protein A [Caldicellulosiruptor
           hydrothermalis 108]
          Length = 308

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/166 (14%), Positives = 67/166 (40%), Gaps = 19/166 (11%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
            R  D + L +   C  +C +C  +++   +    LS ++    ++  ++   I ++  T
Sbjct: 6   SRKIDYLRLSVTDRCNFFCMYCRTKDLYYERIDQ-LSKEEIFRIISAFKK-LGIQKLRIT 63

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P +     + ++++    I  ++ +   +            ++ + +K   K V I+
Sbjct: 64  GGEPFLRDD--IFEIIEFAHSIG-IENINITT---NGW--LDTEKIKKVIKSPLKSVNIS 115

Query: 211 IHA---NHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGIN 248
           +           +      + + AI  L     + ++ +VL++ +N
Sbjct: 116 LDTLDKEKYRSVTGIDGLDKVLTAIDELREHKRVKIN-TVLIRSVN 160


>gi|312885416|ref|ZP_07745057.1| Radical SAM domain protein [Mucilaginibacter paludis DSM 18603]
 gi|311302114|gb|EFQ79142.1| Radical SAM domain protein [Mucilaginibacter paludis DSM 18603]
          Length = 317

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 67/164 (40%), Gaps = 22/164 (13%)

Query: 99  LKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           + LL  C + C +C      E+    +    +++  E  +A +   + +  +  TGG+PL
Sbjct: 17  VSLLSTCNLGCIYCTMGSEDEIAYDHRPQTPAARFIE-LIAAVHAHTGLKTIRLTGGEPL 75

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHAN 214
           +   + L+ V+  ++ +  +  +R  S         +     + L++AG   V +++ A 
Sbjct: 76  LY--RELEAVISGIKALG-ITDIRMTSNAF------LLERSAEKLQQAGLRSVNVSLDAM 126

Query: 215 HPYEFSEEAIAA--------ISRLANAGIILLSQSVLLKGINDD 250
               F               I    +AG+ +   SV+++G N D
Sbjct: 127 DANTFFAMTRRKQLPRTLQGIEAAIDAGLEVKINSVIMRGKNHD 170


>gi|119356660|ref|YP_911304.1| radical SAM domain-containing protein [Chlorobium phaeobacteroides
           DSM 266]
 gi|119354009|gb|ABL64880.1| Radical SAM domain protein [Chlorobium phaeobacteroides DSM 266]
          Length = 351

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 88  GIVHRYPD-RILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           G+ H   D   +L++   + C + CR C      G  +  ++S +  +  L  ++  S I
Sbjct: 42  GVAHLNRDATAILQVNTGYRCNLLCRHCHVDA--GPDRTEMMSRQTMQDCLNALK-NSSI 98

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYI 172
             +  TGG P +  +  L   ++  R I
Sbjct: 99  RTLDITGGAPEM--NPELPWFIREARKI 124


>gi|330466391|ref|YP_004404134.1| MiaB-like tRNA modifying protein ylig [Verrucosispora maris
           AB-18-032]
 gi|328809362|gb|AEB43534.1| miab-like tRNA modifying enzyme ylig [Verrucosispora maris
           AB-18-032]
          Length = 492

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 50/158 (31%), Gaps = 43/158 (27%)

Query: 99  LKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT---- 150
           LKL   C   C FC    FR   V      +L+  +  A       KS + E++      
Sbjct: 184 LKLASGCDRRCAFCAIPAFRGAFVSRTPDELLAEAEWLA-------KSGVRELVLVSENS 236

Query: 151 ---GGDPLILSHKRLQKVLKTLRYIKHVQILR----------------FHSRVPIVDP-- 189
              G D  +   + L+K+L  L  I  +  +R                  +  P V P  
Sbjct: 237 TSYGKD--LGDPRALEKLLPQLAAIDGIVRVRASYLQPAETRPGLIEAIAT-TPGVAPYF 293

Query: 190 ----QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223
               Q  +  +++ ++  G             E   +A
Sbjct: 294 DLSFQHSSEPVLRRMRRFGSTDRFLELLASARELDPQA 331


>gi|304406644|ref|ZP_07388299.1| Radical SAM domain protein [Paenibacillus curdlanolyticus YK9]
 gi|304344177|gb|EFM10016.1| Radical SAM domain protein [Paenibacillus curdlanolyticus YK9]
          Length = 378

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGG---D-PL 155
            +VC VYCRFC      GS++G VL +   E  +  IQE   +   E++  GG   D P 
Sbjct: 62  TNVCDVYCRFCAFYRAPGSKEGYVLPN---ETIMQKIQETVDVGGTEILMQGGTNPDLPF 118

Query: 156 ILSHKRLQKVLKTLRYI 172
                 L+++ +    I
Sbjct: 119 SYYTDVLREIKQRFPQI 135


>gi|289524370|ref|ZP_06441224.1| molybdopterin-based tungsten cofactor biosynthesis protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289502389|gb|EFD23553.1| molybdopterin-based tungsten cofactor biosynthesis protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 439

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 27/168 (16%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
            +++++   C + C  CF     G +        D    L  ++ K+    + F+GG+P 
Sbjct: 89  TVVVEVTEKCQLKCPVCFASAGEGFEPDFH----DLAKLLHDVRHKASNAILQFSGGEP- 143

Query: 156 ILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            +       +   L        +Q+     R    +P        Q LK++G   ++ + 
Sbjct: 144 TIRDDLFDLI--RLASNLKFPGIQLNTNGLR-LAQEP-----GYAQKLKKSGLN-WVFLQ 194

Query: 213 ANHPYEFS----------EEAIAAISRLANAGIILLSQSVLLKGINDD 250
            +   E +           E + AI+    AG+ ++    L KGIND+
Sbjct: 195 FDGLRETTYRALRGRPLLSEKVRAINACQEAGLGVVLVPTLTKGINDN 242


>gi|154498439|ref|ZP_02036817.1| hypothetical protein BACCAP_02428 [Bacteroides capillosus ATCC
           29799]
 gi|150272507|gb|EDM99692.1| hypothetical protein BACCAP_02428 [Bacteroides capillosus ATCC
           29799]
          Length = 449

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 46/262 (17%), Positives = 89/262 (33%), Gaps = 72/262 (27%)

Query: 60  FIPQKEELNILPEEREDPIGDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFCFRREM 117
            +P  E  +++  ++    GD +H+   G  +V        LK+   C   C +C    +
Sbjct: 117 IVPAVE--SVMEGDQPTFFGDIDHTVEDGARMVSTPAYTAYLKIAEGCDNRCSYCIIPYL 174

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
            G  +   +  +   A    +     + E+I    D                       I
Sbjct: 175 RGRYRSRTM--ESLLAEAKEL-ADRGVKEIIVIAQD-----------------------I 208

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR----LANA 233
            R+ + +     +R+  EL++ L +     ++ +H  +P E  ++ I  I+     L   
Sbjct: 209 TRYGTDL---YKKRMLGELLKELCKLPFH-WVRLHYLYPDELDDDLIDVIASEPKILKYI 264

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293
            I        L+ IND  ++L ++ R                   GT        E   +
Sbjct: 265 DIP-------LQHIND--KLLRSMNRR------------------GTK------AEILAL 291

Query: 294 VASLKEKISGL-CQPFYILDLP 314
           +  L+ +I GL  +   I  LP
Sbjct: 292 LDKLRARIPGLVLRTSLIAGLP 313


>gi|121078489|gb|ABM47405.1| Fe-Mo cofactor biosynthesis protein [Rhizobium leguminosarum bv.
           trifolii]
          Length = 495

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 62/193 (32%), Gaps = 42/193 (21%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H Y  R+ L +   C + C +C R+         G     +   +    A+A   E  Q
Sbjct: 59  AHLYFARMHLAVAPACNIQCNYCNRKYDCANESRPGVASHRLTPDQALRRAMAVANEVPQ 118

Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
           +  V   G GD      ++ +  L  + R I  V++    +      P+ +  EL+    
Sbjct: 119 LSVVGIAGPGDA-CYDWRKTKATLIPIAREIPDVKLC-ISTNGLA-LPEHV-DELVDMNV 174

Query: 202 EAGKPVYIAI-----------------HAN--------HPYEFSEEAIAAISRLANAGII 236
                    +                   N        H  +        +  LA  GI+
Sbjct: 175 GHVTITINMVDPKIGTKIYPWIFYDGRRYNGIDASRILHERQMLG-----LEMLAERGIL 229

Query: 237 LLSQSVLLKGIND 249
           +   SV++ G+ND
Sbjct: 230 IKVNSVMIPGVND 242


>gi|325959672|ref|YP_004291138.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
 gi|325331104|gb|ADZ10166.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
          Length = 500

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 28/169 (16%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPL 155
           L+ + + C + C  CF    V S+K    S ++    L  ++    +    + + GG+P 
Sbjct: 97  LIDVTNRCNLKCPVCFANAAV-SKKLYEPSYEEIRTMLRNLRNNRPVPTPAIQYAGGEPT 155

Query: 156 ILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           +     L  ++K        H QI     R+      R+ P L Q LK+AG    + +  
Sbjct: 156 VRKD--LVDLIKLAKEEGFSHTQIATNGVRL-----ARL-PSLAQELKDAGLNT-VYLQF 206

Query: 214 NHPYE----------FSEEAIAAISRLANA--GIILLSQSVLLKGINDD 250
           +   E               I AI     A  GI+L+    LLKGINDD
Sbjct: 207 DGVTEEPYLEIRQKDLLATKIKAIENCRKANLGIVLV--PTLLKGINDD 253


>gi|310779821|ref|YP_003968153.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
 gi|309749144|gb|ADO83805.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926]
          Length = 306

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 47/108 (43%), Gaps = 13/108 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156
           L L   C   C +C++    G++K   +  +  +     I+ +    + +    GG+P  
Sbjct: 10  LILTMECNANCDYCYQN---GAEKVPDMDEEFIDKLYEKIKSEEYYNKFVIALFGGEP-T 65

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEA 203
           L+  ++  +L+ L  +K  ++ RF        P   I+ + +  +K+A
Sbjct: 66  LAEDKILYLLEKLENLKDSKVFRF------TMPTNAIDTDAVLRIKKA 107


>gi|307594418|ref|YP_003900735.1| Radical SAM domain-containing protein [Vulcanisaeta distributa DSM
           14429]
 gi|307549619|gb|ADN49684.1| Radical SAM domain protein [Vulcanisaeta distributa DSM 14429]
          Length = 366

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 45/250 (18%), Positives = 78/250 (31%), Gaps = 69/250 (27%)

Query: 84  SPLKGIVHRYPDRI-------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           S  + +  +Y   +       +L   +VC + CRFC    + G  +   LS ++    +A
Sbjct: 40  SAAEYLTRKYFGNVVTFIPNMILNYTNVCVIACRFCAFYRLPGHPEAYTLSVEEAVRRVA 99

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
            I  +  I +V+  GG             +     I+                      L
Sbjct: 100 AIDREFGIRQVLVQGG-------------INPELDIE------------------YYEGL 128

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAA-------ISRLANAGIILLSQS---VLLKG 246
            + LK     V I  H   P E    A          + RL  AG+  L+     +L+  
Sbjct: 129 FKALKAKLPHVAI--HGLSPIEVDYLARKHRMSYAEVLDRLRGAGMDTLAGGGGEILVDR 186

Query: 247 IND-------DPEILANLMRTFVELRIK----PYYLHHPDLAAGTSHFRLTIEEGQKIVA 295
           +         D +   N+M T   + I       Y H   ++    H         +I+ 
Sbjct: 187 VRRAIAPHKIDADTWLNIMETAHRMGIMSNATMMYGHVETMSDWAEHL-------YRIIE 239

Query: 296 SLKEKISGLC 305
            L+ +  G  
Sbjct: 240 -LQRRTHGFL 248


>gi|317056337|ref|YP_004104804.1| Coproporphyrinogen dehydrogenase [Ruminococcus albus 7]
 gi|315448606|gb|ADU22170.1| Coproporphyrinogen dehydrogenase [Ruminococcus albus 7]
          Length = 489

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 26/146 (17%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWE--------V 147
           L   +  CP  C +C     +      G  L  +  +     I+  + I +        V
Sbjct: 168 LYVSIPFCPTRCSYCS---FISQTLDSGRKLIPEYIDKMCREIRHTALITKRLGLKLDTV 224

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            F GG P  +   +L  ++K    I+H   +  +R ++ V    P  I  E ++ +K  G
Sbjct: 225 YFGGGTPTSIEASQLAALMK---CIEHSFDMSSVREYT-VEAGRPDTITEEKLRTIKANG 280

Query: 205 -KPVYIAIHANHPYEFSEEAIAAISR 229
              + I      P   + + + AI R
Sbjct: 281 CTRISIN-----PQSLNPDVLEAIGR 301


>gi|210630236|ref|ZP_03296326.1| hypothetical protein COLSTE_00210 [Collinsella stercoris DSM 13279]
 gi|210160562|gb|EEA91533.1| hypothetical protein COLSTE_00210 [Collinsella stercoris DSM 13279]
          Length = 272

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 39/206 (18%), Positives = 70/206 (33%), Gaps = 47/206 (22%)

Query: 94  PDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWE---VI 148
           P    +     CP+ C +C       VGS  GT ++    E  +   +     +    + 
Sbjct: 33  PGVRFVVFTQGCPMRCAYCHNPDTWAVGSGAGTSVT---VERIIDEFESNRPFYRTGGIT 89

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV-------DPQRINPELIQCLK 201
            TGG+PL L  + +  +   +    +    R H+ +           P R +    + L 
Sbjct: 90  VTGGEPL-LQPEFVGDLFAAMHANPNG---RVHTCLDSCGYAYNPKKPARFD----KVLA 141

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISR------------LANAGIILLSQSVLLKGIND 249
           +    +    H+        E   A++R            LA  G+ ++ + V++ GI D
Sbjct: 142 QTDLVLLDIKHS------DPEGHKALTRCAPDNILAFGDELARRGVKVVIRHVIVPGITD 195

Query: 250 DPEILANL------MRTFVELRIKPY 269
             E    L          V L + PY
Sbjct: 196 TEEECEALGRLIAPWHNVVGLEMLPY 221


>gi|196230119|ref|ZP_03128982.1| coenzyme PQQ biosynthesis protein E [Chthoniobacter flavus
           Ellin428]
 gi|196225716|gb|EDY20223.1| coenzyme PQQ biosynthesis protein E [Chthoniobacter flavus
           Ellin428]
          Length = 334

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 5/78 (6%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  +L ++ + CP++C +C    M     G  L++ + +  +        + +  F+GG+
Sbjct: 5   PYALLAEVTYRCPLHCPYCSNPAMYPG--GNELTTSEWQRVIDE-AAALGVLQAGFSGGE 61

Query: 154 PLILSHKRLQKVLKTLRY 171
           PL+     L +++   R 
Sbjct: 62  PLLRPD--LAQLIAHARQ 77


>gi|126459299|ref|YP_001055577.1| radical SAM domain-containing protein [Pyrobaculum calidifontis JCM
           11548]
 gi|126249020|gb|ABO08111.1| Radical SAM domain protein [Pyrobaculum calidifontis JCM 11548]
          Length = 294

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 30/177 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLIL 157
           L     C   C +C+    + +        +  E     +++  +   V  +   DP   
Sbjct: 25  LNPYTGCGHGCLYCYITSYIPNAFNPRPKERLMELVRRDLEKIPRGAVVALSNSSDPYTP 84

Query: 158 SHKRL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
              +L   +KVL+ L  ++    +   ++ P+V         +  L +  + V + I   
Sbjct: 85  PEAQLGLTRKVLEAL--LERGYRVLITTKSPLVL------RDLDILAKHRERVAVQITIT 136

Query: 215 HPYE-----FSEEA------IAAISRLANAGIILLSQSV----LLKGINDDPEILAN 256
              E         A      + A+ +LA AGI +   +V    L+  +NDD E +  
Sbjct: 137 TLREELAERLEPRAPRPRGRLDAVKKLAEAGIKV---TVRLDPLIPYLNDDEENIEE 190


>gi|91785150|ref|YP_560356.1| tRNA-i(6)A37modification enzyme MiaB [Burkholderia xenovorans
           LB400]
 gi|123168088|sp|Q13UD5|MIAB_BURXL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|91689104|gb|ABE32304.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia xenovorans
           LB400]
          Length = 457

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 26/138 (18%)

Query: 91  HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
           H  P R+      + ++  C  YC +C     V         S+  +  L  I       
Sbjct: 138 HLPPARVDGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192

Query: 144 IWEVIFTGGD------PLILSHKRLQ---KVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           + EV   G +       L L    +    ++++ +  I  ++ +R+ +      P+    
Sbjct: 193 VREVTLLGQNVNAYRAGLTLGSTEIADFAQLIEYVADIPGIERIRYTTSH----PKEFTQ 248

Query: 195 ELIQCLKEAGKPVYIAIH 212
            LI    +  K +   +H
Sbjct: 249 RLIDTYAKVPK-LVSHLH 265


>gi|86748084|ref|YP_484580.1| nitrogenase cofactor biosynthesis protein NifB [Rhodopseudomonas
           palustris HaA2]
 gi|86571112|gb|ABD05669.1| nitrogenase cofactor biosynthesis protein NifB [Rhodopseudomonas
           palustris HaA2]
          Length = 518

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 60/203 (29%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H +  R+ + +   C + C +C R+         G     +   +     +A      Q
Sbjct: 68  AHHHFARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAARKVIAVASTIPQ 127

Query: 144 IWEVIFTG-GDPLILSHK------------------------RLQKVLKTLRYI--KHVQ 176
           +  +   G GD L    K                         L   ++ +  +   HV 
Sbjct: 128 MTVLGIAGPGDALANPAKTFKTFELVTATAPDIKLCLSTNGLMLPDYVEQIAAMNVDHV- 186

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI--------- 227
            +             I+PE+       G  +Y  I  NH   F+    + I         
Sbjct: 187 TITI---------NMIDPEI-------GAQIYPWIFYNH-RRFTGVEASKILSERQLLGL 229

Query: 228 SRLANAGIILLSQSVLLKGINDD 250
             L   GI++   SV++ GIND 
Sbjct: 230 EMLTARGILVKVNSVMIPGINDR 252


>gi|330990520|ref|ZP_08314478.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp.
           SXCC-1]
 gi|329762423|gb|EGG78909.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp.
           SXCC-1]
          Length = 358

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 31/189 (16%), Positives = 68/189 (35%), Gaps = 26/189 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDP 154
           + ++  C   C +C  +         +   +  +      +A +  +  + ++  TGG+P
Sbjct: 28  ISVMDRCNFRCPYCMPKATYHEGFRFLGPKERLDFDEIERVARMAAELGVTKIRLTGGEP 87

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSR---VPIVDP-------QRINPELIQCLKEAG 204
           L+     L  +++ L  +  ++ +   +    +P   P       QR+   L        
Sbjct: 88  LL--RPGLPDLVRRLGALPGIEDVALTTNGVLLPRFAPALRQAGLQRVTVSLD------S 139

Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGII--LLSQSVLLKGINDD--PEILANLMRT 260
               +  H +         +  I      G    +   +V+ +G+ND   P+ILA    T
Sbjct: 140 LDPAVFAHMSGGRGDLPAVLKGIDAACATGFEGGVKINTVVQRGVNDADVPDILARFRNT 199

Query: 261 FVELRIKPY 269
            V +R+  Y
Sbjct: 200 GVTVRLIEY 208


>gi|304440215|ref|ZP_07400105.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
 gi|304371264|gb|EFM24880.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640]
          Length = 340

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 28/178 (15%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      CP  C FC + ++  +   T  + K+  +  L Y ++   I EV F GG    
Sbjct: 8   IFIPHLGCPHDCVFCNQNKIASTSIATKKTVKNTIDEYLDYFRKD-SIVEVAFYGG---S 63

Query: 157 LSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVY 208
            +   ++  +     + +       V  +R  +R     P  I+  +++ LK  G   V 
Sbjct: 64  FTAIPIEDQIN-FLSVANEYKKKNLVSFIRLSTR-----PDYIDENILEILKSNGVDTVE 117

Query: 209 IAIHANHPYEFSEE--------AIAAISRLANAGIIL-LSQSVLLKGINDDPEILANL 257
           + + +++    ++            ++  L   G  + L Q V L   ND+ E+   +
Sbjct: 118 LGVQSSNQNVLNKSGRGHDFDCVKKSVKMLKKYGFNVGLQQMVGLPYSNDELEMQTAM 175


>gi|296158258|ref|ZP_06841090.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. Ch1-1]
 gi|295891594|gb|EFG71380.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. Ch1-1]
          Length = 369

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F ++        +LS ++ E           + ++  TGG+
Sbjct: 41  ISVTDRCNFRCVYCMPRSVFDKDYTFLPHSALLSFEEIERLARIFVAH-GVEKIRLTGGE 99

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K L+ ++  L ++
Sbjct: 100 PLL--RKNLEFLIDRLAHL 116


>gi|294338253|emb|CBJ94291.1| hypothetical phage protein (Radical SAM family) [Campylobacter
           phage CPt10]
          Length = 266

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 15/128 (11%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           I+L L+  C   C +C     V       L+  +    +  I++    + +  TGG+P  
Sbjct: 5   IVLNLIDYCGFNCEYCSSS-QVKKVNSNPLTKLNFLMLIKQIEKSLSRFIIKVTGGEP-T 62

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-H 215
           L    L+  ++ L  +K++Q      RV I             L++      +    + H
Sbjct: 63  LHPNFLE-FIEKLNNVKNIQ------RVIIT-----TNGSCNNLEKLNNYKKVHTIISYH 110

Query: 216 PYEFSEEA 223
           P +  E++
Sbjct: 111 PNQIDEDS 118


>gi|170291214|ref|YP_001738030.1| radical SAM domain-containing protein [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170175294|gb|ACB08347.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 334

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           S   G++ R  + I ++    CP+ C FC       S+        D    +++ +   +
Sbjct: 16  SVAFGLIDRGTNLIQVRPSSSCPLSCIFCSTDAGPKSRTRRTEFLVDLNYIISWFERLVE 75

Query: 144 ------IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                 I   I T GDP +    ++  ++K LR I  V+++   +  P+
Sbjct: 76  SKGISDIEAHIDTVGDPFLYP--KIVDLVKRLRDIPEVKVISAQTHGPL 122


>gi|91794426|ref|YP_564077.1| radical SAM family protein [Shewanella denitrificans OS217]
 gi|91716428|gb|ABE56354.1| Radical SAM [Shewanella denitrificans OS217]
          Length = 292

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 9/111 (8%)

Query: 97  ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           ++L++ + C    C FC        Q       K  +  L        I  V    GD +
Sbjct: 18  LILQVTNGCSWNNCSFCDMYTQPQKQFRAQKLDKIEQDILNAAASGYPISRVFLADGDAM 77

Query: 156 ILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIV-DPQRINPELIQCLKEAG 204
            L  KRL+++ + +  ++  V      +R+     P+ +  + ++ LKE  
Sbjct: 78  SLPFKRLKEICELINTHLPSV------TRISSYCLPRNLTNKTVEQLKELR 122


>gi|77919684|ref|YP_357499.1| putative methyltransferase [Pelobacter carbinolicus DSM 2380]
 gi|77545767|gb|ABA89329.1| putative methyltransferase [Pelobacter carbinolicus DSM 2380]
          Length = 1014

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 9/105 (8%)

Query: 78  IGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           +   + +   G  H      L      + + C + CR C                 +   
Sbjct: 60  LPQGDAAVYPGRSHFLKTESLRELWFHITNRCNMNCRHCM---FGSGPGDAAELDAERIV 116

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            LA             TGG+PL+   +R   + + L  +   +++
Sbjct: 117 TLARQASNLGCRVFALTGGEPLVH--RRFDYIARELLALPDSRLV 159


>gi|21242671|ref|NP_642253.1| Fe-S oxidoreductase [Xanthomonas axonopodis pv. citri str. 306]
 gi|21108142|gb|AAM36789.1| Fe-S oxidoreductase [Xanthomonas axonopodis pv. citri str. 306]
          Length = 392

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 50/122 (40%), Gaps = 16/122 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD----TEAALAYIQEKSQIWEVIF 149
           P  +LLKL   C + C +C               ++      +  LA + E+ +   + F
Sbjct: 20  PTAVLLKLTGTCNIDCDYC------YDYDAERFRAQQSLGTIQTTLAPLLERGEPLSIAF 73

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
            GG+PL L    +++V++ L    H    R        +  R  PE++  L++    V +
Sbjct: 74  HGGEPL-LRFGLIRQVVQWLE--PH--RARVGF-SLQTNGTRFTPEILDFLEQHDFSVGL 127

Query: 210 AI 211
           ++
Sbjct: 128 SL 129


>gi|291087012|ref|ZP_06345142.2| radical SAM domain protein [Clostridium sp. M62/1]
 gi|291076635|gb|EFE13999.1| radical SAM domain protein [Clostridium sp. M62/1]
          Length = 462

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + CR+CF  E     +  +++ +  + AL ++   S      EV F GG+PL
Sbjct: 97  LHIAHDCNLACRYCFAEEGEYHGRRALMTYEVGKKALDFLVANSGNRINLEVDFFGGEPL 156

Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRF 180
           +     K+L    ++L    H +  RF
Sbjct: 157 MNWDVVKQLVAYGRSLEK-PHNKKFRF 182


>gi|222445142|ref|ZP_03607657.1| hypothetical protein METSMIALI_00763 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434707|gb|EEE41872.1| hypothetical protein METSMIALI_00763 [Methanobrevibacter smithii
           DSM 2375]
          Length = 498

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 30/169 (17%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDP 154
           L+ + + C + C  CF    V   +    +  +    L  ++          + + GG+P
Sbjct: 89  LIDVTNRCNLRCPVCFANAAVSG-RLYEPTQDEIREMLRNLRNLKPHPTP-AIQYAGGEP 146

Query: 155 LILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----- 207
            +     L +++         HVQI     R+      R      + LK+AG        
Sbjct: 147 TVRKD--LVELVAMAKEEGFTHVQIATNGLRL-----AR-KENFAKELKDAGLNTVYLAF 198

Query: 208 -------YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
                  YI    N       + I AI     AG+ ++    L+KG+ND
Sbjct: 199 DGVTPEPYIN---NRGKNLLPQKIQAIENCRKAGLGVVLVPTLIKGVND 244


>gi|153868712|ref|ZP_01998465.1| radical SAM family protein [Beggiatoa sp. PS]
 gi|152074705|gb|EDN71535.1| radical SAM family protein [Beggiatoa sp. PS]
          Length = 321

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 5/82 (6%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           D + + L ++C   C  C      G  +  +++ +     L Y++    I  + FTGG P
Sbjct: 22  DTLQVNLGYLCNQQCLHCHVNA--GPNRIEIMTRETCNQILDYLRATPSIQTLDFTGGAP 79

Query: 155 LILSHKRLQKVLKTLRYIK-HV 175
            +  +   +  ++T R +  HV
Sbjct: 80  EL--NPHFRYFVETARQLDVHV 99


>gi|148642909|ref|YP_001273422.1| molybdenum cofactor biosynthesis-related protein, MoaA
           [Methanobrevibacter smithii ATCC 35061]
 gi|148551926|gb|ABQ87054.1| molybdenum cofactor biosynthesis-related protein, MoaA
           [Methanobrevibacter smithii ATCC 35061]
          Length = 498

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 30/169 (17%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDP 154
           L+ + + C + C  CF    V   +    +  +    L  ++          + + GG+P
Sbjct: 89  LIDVTNRCNLRCPVCFANAAVSG-RLYEPTQDEIREMLRNLRNLKPHPTP-AIQYAGGEP 146

Query: 155 LILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----- 207
            +     L +++         HVQI     R+      R      + LK+AG        
Sbjct: 147 TVRKD--LVELVAMAKEEGFTHVQIATNGLRL-----AR-KENFAKELKDAGLNTVYLAF 198

Query: 208 -------YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
                  YI    N       + I AI     AG+ ++    L+KG+ND
Sbjct: 199 DGVTPEPYIN---NRGKNLLPQKIQAIENCRKAGLGVVLVPTLIKGVND 244


>gi|18312034|ref|NP_558701.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str.
           IM2]
 gi|18159459|gb|AAL62883.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str.
           IM2]
          Length = 372

 Score = 38.9 bits (90), Expect = 1.3,   Method: Composition-based stats.
 Identities = 59/317 (18%), Positives = 104/317 (32%), Gaps = 84/317 (26%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-F 149
           H  P  +  +    CP+ C+ C R + +       L++++ +  +  + E      ++  
Sbjct: 12  HEAPLLVFWESTKACPLACKHC-RADAILKPLPGELTTQEGKRLIEQVAEFGDPKPLLII 70

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208
           TGGDPL+ S   L +++     +  V +    S  P V P  +N E ++ +KE+G K + 
Sbjct: 71  TGGDPLMRSD--LFELIDYANSL-SVPV----SLAPAVSPN-LNTETLKLIKESGVKSIS 122

Query: 209 IA-------IHANHPYEFSE------EAIAAISRLANAGIILLSQSV------------- 242
           I+        H     E         E + AI      G+ +   +V             
Sbjct: 123 ISLDGARPETH----DEIRGVPGSYKETVNAIKTAVELGVSVQVNTVVWRKSLAELPEVA 178

Query: 243 -LLKGINDDPEILANLM-----RTFVELRIKP--Y------------YLHHPDLAAGTSH 282
            LLK  N   ++          R   EL I P  Y            Y           +
Sbjct: 179 YLLK--NLGVKVWEVFFLIVTGRAKEELDITPEEYEAAVQFLVDVSTYGFQVRTVEAPFY 236

Query: 283 FRLTIE--EGQK----IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336
            R  +E  +G++    +   L E++  L           G     +D   +         
Sbjct: 237 RRAKLERLKGREFGHPLYNQLVERLRNLM----------GPPVRAVDPTIVPTRDGFGII 286

Query: 337 ITDHHNIVH-----DYP 348
              +   VH      YP
Sbjct: 287 FIAYDGTVHPSGFLPYP 303


>gi|306819868|ref|ZP_07453522.1| PDZ domain protein [Eubacterium yurii subsp. margaretiae ATCC
           43715]
 gi|304552115|gb|EFM40052.1| PDZ domain protein [Eubacterium yurii subsp. margaretiae ATCC
           43715]
          Length = 441

 Score = 38.5 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 36/156 (23%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C   C FCF  ++    + T+    D ++ L+++Q       +  T      +    +
Sbjct: 92  QTCRNKCIFCFIDQLPKGMRKTLYIKDD-DSRLSFLQGN----FITMT-----NMGDAEI 141

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
            K++K   +I  V  +  H+  P +         ++ LK                  + +
Sbjct: 142 DKMIK--YHISPVN-ISVHTTNPTL--------RVKMLKNKN---------------AGD 175

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
            +  + RL+NA I + +Q VL+  +ND  E+   L 
Sbjct: 176 ILDKMKRLSNANINMNAQIVLIPNVNDKEELENTLS 211


>gi|303235727|ref|ZP_07322334.1| ribosomal protein S12 methylthiotransferase RimO [Prevotella
           disiens FB035-09AN]
 gi|302484174|gb|EFL47162.1| ribosomal protein S12 methylthiotransferase RimO [Prevotella
           disiens FB035-09AN]
          Length = 433

 Score = 38.5 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 17/118 (14%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW--- 145
           H Y     +K+   C  +C +C    + G  K      +D    +A +      +     
Sbjct: 135 HHY---AYIKIAEGCDRHCAYCAIPLITG--KHRSRKMEDILKEVAELAAAGTKEFQVIE 189

Query: 146 -EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            E+ + G D  +     + +++  +  I  V+ +R H   P   P     +L+  ++E
Sbjct: 190 QELTYYGVD--LDGKHHITELISRMADIPGVEWIRLHYAYPNQFPM----DLLDVMRE 241


>gi|261879550|ref|ZP_06005977.1| MiaB family RNA modification enzyme [Prevotella bergensis DSM
           17361]
 gi|270333776|gb|EFA44562.1| MiaB family RNA modification enzyme [Prevotella bergensis DSM
           17361]
          Length = 443

 Score = 38.5 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 67/225 (29%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFT--GG 152
             +K+   C  +C +C    M G      +    ++ +  +A   ++ QI E   T  G 
Sbjct: 150 AYIKIAEGCDRHCAYCAIPLMTGRHTSRSMEDILEEVKQLVAEGVKEFQIIEQELTYYGV 209

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           D  I    R+ +++  +  I  V+ +R H       P +   EL+  ++E          
Sbjct: 210 D--IDGKPRIAELISRMADIPGVKWIRLH----YAYPNQFPLELLDVMREK--------- 254

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272
                         +                L+ I+D       L R             
Sbjct: 255 --------PNVCKYLDIA-------------LQHISDHV-----LSRMLRH--------- 279

Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
                       ++  E  +++  +++++ G+  +   ++  PG 
Sbjct: 280 ------------VSKAETLELIRKIRQEVPGITLRTTLMVGFPGE 312


>gi|205374147|ref|ZP_03226947.1| RNA modification protein [Bacillus coahuilensis m4-4]
          Length = 430

 Score = 38.5 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 11/124 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
             R  LK+   C  +C FC      G  +        +  +  +       +I    I T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIRQAQQLVD--AGYKEIVLTGIHT 199

Query: 151 GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           GG    +    L  +L+ L   +K ++ +R  S    ++  ++  E+++ + ++   V  
Sbjct: 200 GGYGEDMKDYNLALLLRDLETQVKGLKRIRISS----IEASQLTDEVMEVIDQS-NMVVR 254

Query: 210 AIHA 213
            +H 
Sbjct: 255 HLHI 258


>gi|149184079|ref|ZP_01862427.1| hypothetical protein BSG1_17550 [Bacillus sp. SG-1]
 gi|148848213|gb|EDL62515.1| hypothetical protein BSG1_17550 [Bacillus sp. SG-1]
          Length = 445

 Score = 38.5 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 19/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C FC      G  +      +    A   +       E++ T   
Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMRSREP-EEVIRQAQQLVDA--GYKEIVLTGIH 201

Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D   +    L  +L+ L   +  ++ +R  S    ++  ++  E+I+ +  +  
Sbjct: 202 TGGYGED---MKDYNLAMLLRDLEEKVDGLKRIRISS----IEASQLTDEVIEVIDNSKL 254

Query: 206 PVYIAIHA 213
            V   +H 
Sbjct: 255 -VVRHLHI 261


>gi|94266923|ref|ZP_01290577.1| Radical SAM [delta proteobacterium MLMS-1]
 gi|93452399|gb|EAT03016.1| Radical SAM [delta proteobacterium MLMS-1]
          Length = 351

 Score = 38.5 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 36/216 (16%), Positives = 65/216 (30%), Gaps = 35/216 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  +  ++   C + C  C     + ++        + +  L  I   +Q   V+ +GG+
Sbjct: 5   PKWLAWEITRRCNLNCVHCRSSSELEAKGHPDFDFTEAKRILDDITSYAQP-VVVLSGGE 63

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210
           PL L           +      + LR        +   +  E+ + LKE G  +      
Sbjct: 64  PL-LRDDVFD-----IAAYGTEKGLRMC---LATNGTLVTDEVCRRLKEVGIRMVSMSLD 114

Query: 211 -----IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
                +H N    P  F    I A        I  L  S   K    D   +  L +   
Sbjct: 115 GADAKVHDNFRSQPGAFDG-TINATRLFREHEIPFLFNSSFTKRNQADIPRVYRLAKEL- 172

Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
                 +Y+             +    G+ I++ L 
Sbjct: 173 --GATAWYMFM----------IVPTGRGEDILSELI 196


>gi|332300096|ref|YP_004442017.1| MiaB-like tRNA modifying enzyme [Porphyromonas asaccharolytica DSM
           20707]
 gi|332177159|gb|AEE12849.1| MiaB-like tRNA modifying enzyme [Porphyromonas asaccharolytica DSM
           20707]
          Length = 454

 Score = 38.5 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 15/124 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
             R  LK+   C  YC +C      G S+ G++ S       +A +       E+I TG 
Sbjct: 165 RTRHFLKVQDGCNYYCTYCTIPAARGISRNGSIASLVAQAERVAELGG----KEIILTGV 220

Query: 152 --GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
             GD    + + L ++L  L  +  +   R  S    ++P+ + PE+IQ + E  +    
Sbjct: 221 NIGDFGRTTGETLLELLHQLTQVAGIARYRIGS----IEPELLTPEIIQFVAETAQ---F 273

Query: 210 AIHA 213
             H 
Sbjct: 274 MPHF 277


>gi|294085380|ref|YP_003552140.1| MiaB-like tRNA modifying enzyme [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292664955|gb|ADE40056.1| MiaB-like tRNA modifying enzyme [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 439

 Score = 38.5 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 22/142 (15%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139
           +     L G       R  L++   C   C FC      G+ +   L  +  +AA A + 
Sbjct: 142 EMASHMLDGFQE--HTRAFLQIQQGCDHRCTFCIIPYGRGNNRSAGL-HQIIDAAQALV- 197

Query: 140 EKSQIWEVIFTGGDPLILSH-------KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQR 191
                 E++ TG D  I S         RL ++++  LR I  +  LR  S    +DP  
Sbjct: 198 -DGGACEIVLTGVD--ITSWGSDLAGRPRLGRLVRALLREIPALPRLRLSS----IDPAE 250

Query: 192 INPELIQCLKEAGKPVYIAIHA 213
            + EL+  L +  +   +  H 
Sbjct: 251 GDAELMAVLGDDDR---LMPHF 269


>gi|197303393|ref|ZP_03168432.1| hypothetical protein RUMLAC_02115 [Ruminococcus lactaris ATCC
           29176]
 gi|197297391|gb|EDY31952.1| hypothetical protein RUMLAC_02115 [Ruminococcus lactaris ATCC
           29176]
          Length = 490

 Score = 38.5 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 67/162 (41%), Gaps = 32/162 (19%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
           Q + + I   +  D I +    P++    +Y  +  + ++  C  +C +C    + G ++
Sbjct: 169 QSDRMVIDIWKDTDKIVE--DLPVE---RKYSFKSGVNIMFGCNNFCSYCIVPYVRGRER 223

Query: 123 GTVLSS--KDTEAALAYIQEKSQIWEVIFTGGD----------PLILSHKRLQKVLKTLR 170
                +  ++ E  +A       + EV+  G +          P+        ++L+ + 
Sbjct: 224 SRDPKAIVREIERLVA-----DGVVEVMLLGQNVNSYGKNLEHPMTF-----AQLLQEIE 273

Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            I+ ++ +RF +      P+ ++ ELI+ +  + K +   +H
Sbjct: 274 KIEGLERIRFMTSH----PKDLSDELIEVMSRS-KKICRHLH 310


>gi|218782479|ref|YP_002433797.1| radical SAM enzyme, Cfr family [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763863|gb|ACL06329.1| radical SAM enzyme, Cfr family [Desulfatibacillum alkenivorans
           AK-01]
          Length = 359

 Score = 38.5 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 70/220 (31%), Gaps = 53/220 (24%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C + C+FC              +S     +L   +  SQI +V  T  DP  L +    
Sbjct: 115 GCAMGCKFC------------CTASMGLTRSLQANEIISQIRDVQATMEDPEHLRNLVFM 162

Query: 164 KVLKTLRYIKHVQI-----------LRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIA 210
            + + L    +V+            LRF  R   +        L+  +   GK   V +A
Sbjct: 163 GMGEPLANWDNVKQAMDIITDNDWGLRFSGRRVTIS----TVGLVPKMAAVGKDTRVKLA 218

Query: 211 IHANHP-YEFS------------EEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILAN 256
           +  N P  E              EE + A        G  +  + VLLKG+ND P     
Sbjct: 219 VSLNAPDNEIRDQIMPVNKKHPIEELLQACKDFPLRPGRRVTFEYVLLKGVNDSPAHARK 278

Query: 257 LMRTFV----ELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292
           L +       ++ + PY           S F     E   
Sbjct: 279 LGKLLAHQPCKINLIPY------NPHENSPFERPDPEAVD 312


>gi|73668263|ref|YP_304278.1| Fe-S oxidoreductase [Methanosarcina barkeri str. Fusaro]
 gi|72395425|gb|AAZ69698.1| Fe-S oxidoreductase [Methanosarcina barkeri str. Fusaro]
          Length = 377

 Score = 38.5 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 45/113 (39%), Gaps = 11/113 (9%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R  +++   CP  C++C    + G +       +++ +      L +I            
Sbjct: 143 RAPIEISRGCPWGCKYCQTPRLFGREVRHRSVDSIVKNAGYYNDLRFIASN-----AFGY 197

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G D +     +++K+L  L  +   +I  F +    V P+ +  E ++ +++ 
Sbjct: 198 GSDGIHPRFDKVEKLLSALHKLPDKKIF-FGTFPSEVRPEFVTDESVELVRKY 249


>gi|319902104|ref|YP_004161832.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides
           helcogenes P 36-108]
 gi|319417135|gb|ADV44246.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides
           helcogenes P 36-108]
          Length = 432

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  K      ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--KHVSRPMEEILDEVKYLVAEGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G D  +   + L ++++ +  I  V+ +R H   P   P     EL + ++E   
Sbjct: 196 GVD--LYKKQMLPELIEHISEIPGVEWIRLHYAYPAHFPM----ELFRVMRERSN 244


>gi|302671353|ref|YP_003831313.1| radical SAM domain-containing protein [Butyrivibrio proteoclasticus
           B316]
 gi|302395826|gb|ADL34731.1| radical SAM domain-containing protein [Butyrivibrio proteoclasticus
           B316]
          Length = 479

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 10/96 (10%)

Query: 94  PDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---E 146
            D ++    L + H C + C++CF  E     +  +++ +  +AAL ++ + S      E
Sbjct: 114 RDTVIKALCLNIAHDCNLRCKYCFADEGEYHGRRALMTEEVGKAALDFLIKNSGNRRNLE 173

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRF 180
           V F GG+PL ++ + ++K+++  R I  +H +  RF
Sbjct: 174 VDFFGGEPL-MNWEVVKKIVEYGRSIEKEHNKNFRF 208


>gi|269929314|ref|YP_003321635.1| Radical SAM domain-containing protein [Sphaerobacter thermophilus
           DSM 20745]
 gi|269788671|gb|ACZ40813.1| Radical SAM domain protein [Sphaerobacter thermophilus DSM 20745]
          Length = 519

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 66/199 (33%), Gaps = 43/199 (21%)

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL---------LKLLHVCPVYCRFC 112
           P   +L+ LP     P  D    P      RY D  L         +     CP +C +C
Sbjct: 176 PDIRDLDALPF----PAWDLVDVP------RYRDIWLRRHGYFSMNMVTTRGCPFHCNWC 225

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
            +   +  Q+    S ++  A L ++++  Q   + F   D + L    LQ+    +   
Sbjct: 226 AKP--IWGQRYNARSPENVAAELKWLRDNYQPDHIWFV-DDIMGLKPGWLQRYADEVE-- 280

Query: 173 KHVQILRFHSRVPIVDPQRIN----PELIQCLKEAGKPVYIAIHANHPYEF--------- 219
                 R   R P     R++     + I+ L  AG  +      +              
Sbjct: 281 ------RLGVRTPFKSLHRVDLLLRGDTIEALARAGAQIVWVGAESGSQRILDAMEKGTK 334

Query: 220 SEEAIAAISRLANAGIILL 238
            E+ +    RL  AGI + 
Sbjct: 335 VEQIVEVARRLHAAGIQVG 353


>gi|34541783|ref|NP_906262.1| MiaB-like tRNA modifying enzyme [Porphyromonas gingivalis W83]
 gi|34398101|gb|AAQ67161.1| MiaB-like tRNA modifying enzyme [Porphyromonas gingivalis W83]
          Length = 444

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  LK+   C  +C +C     R         +++   +  AA    +   +I     
Sbjct: 150 RTRHFLKVQDGCDYHCSYCTIPKARGRSRNGSIESLVRQAEAVAA----EGGKEIVLTGV 205

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
             GD    + +    +L+ L  ++ ++  R  S    ++P  ++ ELI     +   +  
Sbjct: 206 NIGDFGRSTGETFLDLLRALDQVEGIERYRIGS----IEPNLLSDELID-FCASAHRIAP 260

Query: 210 AIH 212
             H
Sbjct: 261 HFH 263


>gi|56419305|ref|YP_146623.1| molybdopterin cofactor biosynthesis protein [Geobacillus
           kaustophilus HTA426]
 gi|56379147|dbj|BAD75055.1| molybdopterin cofactor biosynthesis protein [Geobacillus
           kaustophilus HTA426]
          Length = 341

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 8/85 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           L ++  C   C +C   E+ G       +  +L+ ++  A LA    +  + ++  TGG+
Sbjct: 22  LSVIDQCNFRCVYCMPAEVFGPNFRFLAEDQLLTVEEM-ALLAECFVELGVEKIRLTGGE 80

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+     L  +++ L  I  ++ +
Sbjct: 81  PLLRRD--LDALIERLSMIPGLRDV 103


>gi|313114955|ref|ZP_07800450.1| MiaB-like tRNA modifying enzyme [Faecalibacterium cf. prausnitzii
           KLE1255]
 gi|310622715|gb|EFQ06175.1| MiaB-like tRNA modifying enzyme [Faecalibacterium cf. prausnitzii
           KLE1255]
          Length = 431

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 18/119 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  +K+   C   C +C      G  +          A L  +   S   EV+ +   
Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--DEASILAELRQLAA-SGYREVVLSAIS 197

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D        L ++++    ++ +Q +R  S    +DP  + PE I  L    K
Sbjct: 198 LPSYGLDTGT----NLVELVEHCAQVEGIQRIRLGS----LDPDMLTPEFITRLAAVEK 248


>gi|310828943|ref|YP_003961300.1| thiamine biosynthesis protein ThiH [Eubacterium limosum KIST612]
 gi|308740677|gb|ADO38337.1| thiamine biosynthesis protein ThiH [Eubacterium limosum KIST612]
          Length = 472

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 6/107 (5%)

Query: 73  EREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           E ED   +  +S  K I  + Y +RI+    L L + C   C +C         +   L+
Sbjct: 60  ELEDE-NEKMYSLAKKIKQKFYGNRIVMFAPLYLSNYCINGCVYCPYHRQNKHIRRKKLT 118

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
            ++    +  +Q+       + TG DP     + + + +KT+  IKH
Sbjct: 119 QEEIRDEVIALQDMGHKRLALETGEDPANNPIEYVLESIKTIYGIKH 165


>gi|306840468|ref|ZP_07473227.1| molybdenum cofactor biosynthesis protein A [Brucella sp. BO2]
 gi|306289483|gb|EFM60701.1| molybdenum cofactor biosynthesis protein A [Brucella sp. BO2]
          Length = 314

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 25/163 (15%)

Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
           +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+   K
Sbjct: 1   MTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV--RK 57

Query: 161 RLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
            +  ++  L        +  + +    S++      R   EL  C     + + +++   
Sbjct: 58  NIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLDTL 109

Query: 215 HPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
           +P +F               I     AGI +   +V LK  ND
Sbjct: 110 NPEKFRTITRWGDLSRVLEGIDAARKAGIHVKINAVALKDFND 152


>gi|306843858|ref|ZP_07476453.1| molybdenum cofactor biosynthesis protein A [Brucella sp. BO1]
 gi|306275613|gb|EFM57337.1| molybdenum cofactor biosynthesis protein A [Brucella sp. BO1]
          Length = 344

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            K +  ++  L        +  + +    S++      R   EL  C     + + +++ 
Sbjct: 86  RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137

Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
             +P +F               I     AGI +   +V LK  ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAARKAGIHVKINAVALKDFND 182


>gi|298242300|ref|ZP_06966107.1| RNA modification enzyme, MiaB family [Ktedonobacter racemifer DSM
           44963]
 gi|297555354|gb|EFH89218.1| RNA modification enzyme, MiaB family [Ktedonobacter racemifer DSM
           44963]
          Length = 502

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 21/165 (12%)

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           R  +P    +   P ER        H P K    +      L ++  C   C +C     
Sbjct: 174 RTVLPMA--ITPKPGERI------AHYPTKIEPKKASPTAWLPIVLGCNKVCTYCIVPYR 225

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT----GGDPLILSHKRLQKVLKTLRYIK 173
            G ++   +     EA L   +   ++  +  T    G D  + +   L  ++ +L  I 
Sbjct: 226 RGRERSRPIDELMIEARLLVEKGAKEVTLLGQTIESYGLD--LANQPNLADLMTSLSEID 283

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIHANH 215
            +  +RF +  P      +   +I+ +    K    + I + A H
Sbjct: 284 GLDRIRFMTSYPRY----MTDSMIERMASLPKVCEHLNIPVQAGH 324


>gi|290955780|ref|YP_003486962.1| hypothetical protein SCAB_12261 [Streptomyces scabiei 87.22]
 gi|260645306|emb|CBG68392.1| putative hypothetical protein [Streptomyces scabiei 87.22]
          Length = 417

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 22/144 (15%)

Query: 83  HSPLKGIV-HRYPDRILLKLLHVCPVYCRFCFRREMV---GSQKGTVLSSKDTEAALAYI 138
            +P  G     Y  + +LK+   C + C +C+           K  ++ +   E     I
Sbjct: 2   MTPAPGHQPQAYLRQFVLKVHSRCNLDCDYCYVYHSADTSWRDKPRLMDAAVAERVAGRI 61

Query: 139 QEKSQIWE-----VIFTGGDPLILSHKRLQKVLKTL------RYIKHVQILRFHSRVPIV 187
            E +   +     ++  GG+PL+L  +RL+++L  L        +     +RF ++   V
Sbjct: 62  AEHATAHDLPDVGIVLHGGEPLLLGARRLEELLGILGRCLAKAGVP----VRFSAQTNGV 117

Query: 188 DPQRINPELIQCLKEAGKPVYIAI 211
               + P+++  L      V +++
Sbjct: 118 L---LTPDILDVLLRHRVDVSVSL 138


>gi|156741565|ref|YP_001431694.1| radical SAM domain-containing protein [Roseiflexus castenholzii DSM
           13941]
 gi|156232893|gb|ABU57676.1| Radical SAM domain protein [Roseiflexus castenholzii DSM 13941]
          Length = 364

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 18/111 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ----IWEVIFTGGDP 154
            ++   C + CR C    M       +      E ++ ++++       + ++I TGGDP
Sbjct: 27  WEMTQACALACRHCRAEAMPQPHPLQLT----FEESVRFLRQIPDFGNPLPQLILTGGDP 82

Query: 155 LILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           L      L  ++   R +   V I       P   P  +   ++  LK  G
Sbjct: 83  LARPD--LLDLIDAARALGVPVSI------TPSATPN-LTRAMLAALKAHG 124


>gi|160877069|ref|YP_001556385.1| radical SAM domain-containing protein [Shewanella baltica OS195]
 gi|160862591|gb|ABX51125.1| Radical SAM domain protein [Shewanella baltica OS195]
 gi|315269273|gb|ADT96126.1| Radical SAM domain protein [Shewanella baltica OS678]
          Length = 295

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 25/162 (15%)

Query: 97  ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           ++L++ + C    C FC                K  +  LA  Q  + +  V    GD +
Sbjct: 19  LILQVTNGCSWNLCSFCDMYTQPQKAFRAQKLDKVEQDILAVAQSGAPVSRVFLADGDAM 78

Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKPVYIA 210
            L   RL+ + + + R++  V      +R+     P+ +    PE +  L+E G  +   
Sbjct: 79  SLPFARLEAICELINRHLPQV------TRISSYCLPRNLNNKTPEQLARLRELGLSLLYV 132

Query: 211 IHANHPYEF---------SEEAIAAISRLANAG----IILLS 239
              +   E           E ++AA+ ++  AG    +++L+
Sbjct: 133 GCESGDDEVLAKIQKGETFESSLAALLKIRAAGMKSSVMILN 174


>gi|332528805|ref|ZP_08404782.1| molybdenum cofactor biosynthesis protein A [Hylemonella gracilis
           ATCC 19624]
 gi|332041871|gb|EGI78220.1| molybdenum cofactor biosynthesis protein A [Hylemonella gracilis
           ATCC 19624]
          Length = 367

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F ++      G +L+ ++             + ++  TGG+
Sbjct: 33  ISVTDRCNFRCSYCMPKEVFTKDYPYLPHGDLLTFEEIARLARAFVS-LGVRKIRLTGGE 91

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K ++ +++ L  I
Sbjct: 92  PLL--RKNIEALIEQLADI 108


>gi|170724452|ref|YP_001758478.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC
           51908]
 gi|169809799|gb|ACA84383.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC
           51908]
          Length = 328

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 70/166 (42%), Gaps = 27/166 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPL 155
           L +   C   C +C   +    ++  VLS ++    LA++ +   +  + ++  TGG+PL
Sbjct: 17  LSVTDRCDFRCVYCMSEDPCFLERDQVLSLEE----LAWVGQAFTELGVKKIRLTGGEPL 72

Query: 156 ILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA 213
           + +   RL K+L  L  +  + +    SR+          +  Q ++ +G   + I++  
Sbjct: 73  VRTDCDRLVKLLGELPGLTELSMTTNGSRL---------TKFAQKMRGSGLARLNISLDT 123

Query: 214 NHPYEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDD 250
             P  F++             I     AG   +   +V+L+G NDD
Sbjct: 124 LKPELFTDLTRNGKLERVIQGIDAAKAAGFKRIKINAVILRGQNDD 169


>gi|71907628|ref|YP_285215.1| radical SAM:molybdenum cofactor synthesis C-terminal [Dechloromonas
           aromatica RCB]
 gi|71847249|gb|AAZ46745.1| GTP cyclohydrolase subunit MoaA [Dechloromonas aromatica RCB]
          Length = 357

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/176 (18%), Positives = 66/176 (37%), Gaps = 24/176 (13%)

Query: 89  IVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           ++ +Y  R   + L +   C   C +C   EM    +  V+S ++     +       + 
Sbjct: 34  LLDKYGRRITYVRLSITDRCDFRCTYCMAEEMTFLPRKEVMSLEECLRVASVFVG-LGVT 92

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204
           ++  TGG+PL+        +++ L  +  ++ L     V   +  ++  +    L  AG 
Sbjct: 93  KLRITGGEPLVRKGAM--WLIERLGALPGLENL-----VLTTNGSQL-DKFAAPLHAAGV 144

Query: 205 KPVYIAIHANHPYEFSEEAI--------AAISRLANAGI--ILLSQSVLLKGINDD 250
           K + I++       F               I      G     L+ +V+++G NDD
Sbjct: 145 KRINISLDTLKADRFRAITRIGDLAKVLRGIEAARATGFRRTKLN-AVMMRGTNDD 199


>gi|254251467|ref|ZP_04944785.1| 2-methylthioadenine synthetase [Burkholderia dolosa AUO158]
 gi|124894076|gb|EAY67956.1| 2-methylthioadenine synthetase [Burkholderia dolosa AUO158]
          Length = 457

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 21/128 (16%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153
              + ++  C  YC +C     V         S+  +  L  I       + EV   G +
Sbjct: 148 TAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQGVREVTLLGQN 202

Query: 154 ------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                  L      +     +++ +  I  ++ +R+ +      P+     LI    +  
Sbjct: 203 VNAYRGALTAGSSEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQRLIDTYAKVP 258

Query: 205 KPVYIAIH 212
           K +   +H
Sbjct: 259 K-LVNHLH 265


>gi|260893907|ref|YP_003240004.1| Radical SAM domain protein [Ammonifex degensii KC4]
 gi|260866048|gb|ACX53154.1| Radical SAM domain protein [Ammonifex degensii KC4]
          Length = 382

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 6/65 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154
           ++      C + CR C+     G   G + +    E A  +IQ   K+++  ++F+GG+P
Sbjct: 31  VVWNSTRACNLRCRHCYASATPGPAPGEMTT----EEARRFIQGLAKTEVPVLLFSGGEP 86

Query: 155 LILSH 159
           L+   
Sbjct: 87  LLRPD 91


>gi|188585754|ref|YP_001917299.1| Radical SAM domain protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350441|gb|ACB84711.1| Radical SAM domain protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 327

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 18/132 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +       C + C+ C+R    G      L++++ +  L  I+  +    +IF+GG+PL 
Sbjct: 3   VSWNTTKSCHLNCKHCYRDA--GEADSRELTTEEGKKLLDEIK-TAGFKLIIFSGGEPLE 59

Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
                + K++   + I     LR    +         I  ++ + LKEAG   + I++ +
Sbjct: 60  RQD--IYKLVSYAKKIG----LRPVLGTSG-----TTITRKVARKLKEAGAVRLGISLDS 108

Query: 214 NHPYEFSEEAIA 225
            HP E  ++   
Sbjct: 109 VHP-EVHDDFRQ 119


>gi|333030363|ref|ZP_08458424.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides
           coprosuis DSM 18011]
 gi|332740960|gb|EGJ71442.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides
           coprosuis DSM 18011]
          Length = 431

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 14/112 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKSQI-WEVIFT 150
             LK+   C   C +C    + G  K      +D    +  +     +E   I  E+ + 
Sbjct: 137 AYLKISEGCDRTCSYCAIPIITG--KHVSRPMEDILDEVKLLVGQGVREFQVIAQELTYY 194

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           G D  +   +RL ++++ +  I  V+ +R H   P   P     +L++ ++E
Sbjct: 195 GVD--LYKKQRLPELIERMAAIPGVEWIRLHYAYPAHFPY----DLLRVMRE 240


>gi|322382440|ref|ZP_08056337.1| coenzyme PQQ synthesis-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153584|gb|EFX45970.1| coenzyme PQQ synthesis-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 439

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149
           Y   + L + H C + C +CF  +   +    ++S +  + A+ Y+ E     +  +V F
Sbjct: 68  YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDVDF 127

Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
            GG+PL+   K +++++   R 
Sbjct: 128 FGGEPLMA-WKVVKQIVAYARS 148


>gi|303231379|ref|ZP_07318113.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella
           atypica ACS-049-V-Sch6]
 gi|302513975|gb|EFL55983.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella
           atypica ACS-049-V-Sch6]
          Length = 268

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 7/88 (7%)

Query: 93  YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y DRI+L       + C   C +C         K   L+ +  +  +  ++       VI
Sbjct: 80  YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQEQIKEEVIALEAMGHKRIVI 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
            +G DPL      L  +L++++ I  ++
Sbjct: 140 ESGEDPLNNP---LDYILESIKTIYSIK 164


>gi|295687475|ref|YP_003591168.1| MiaB family RNA modification enzyme [Caulobacter segnis ATCC 21756]
 gi|295429378|gb|ADG08550.1| RNA modification enzyme, MiaB family [Caulobacter segnis ATCC
           21756]
          Length = 448

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +   +E+ D +    H  + G+         L +   C  +C FC      G +    ++
Sbjct: 136 DFAADEKFDALPAERH--VTGVT------AFLTVQEGCDKFCTFCVVPYTRGGEWSRPVN 187

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH---KRLQKVLKTLRYIKHVQILRFHSRV 184
               E A         + EV   G + +         L K+++ L  I  +  +R+ +  
Sbjct: 188 -DIVEEAKR--LADQGVREVTLLGQN-VNAYDGDGSTLAKLVRQLARIDGLDRIRYTTSH 243

Query: 185 P 185
           P
Sbjct: 244 P 244


>gi|167462543|ref|ZP_02327632.1| Radical SAM domain protein [Paenibacillus larvae subsp. larvae
           BRL-230010]
          Length = 422

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149
           Y   + L + H C + C +CF  +   +    ++S +  + A+ Y+ E     +  +V F
Sbjct: 51  YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDVDF 110

Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
            GG+PL+   K +++++   R 
Sbjct: 111 FGGEPLMA-WKVVKQIVAYARS 131


>gi|90422778|ref|YP_531148.1| radical SAM family protein [Rhodopseudomonas palustris BisB18]
 gi|90104792|gb|ABD86829.1| Radical SAM [Rhodopseudomonas palustris BisB18]
          Length = 473

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/126 (14%), Positives = 38/126 (30%), Gaps = 15/126 (11%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEK-SQIW-- 145
             P  + +     C + C +C+        G         K  +    Y           
Sbjct: 87  LKPSAVYVNATERCNLNCTYCYIPADMRRDGIDMDGPTLLKALDTLDRYFSRHMPADRRP 146

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           ++IF G +PLI      + +   +   K     RF  +        +  +  + L   G 
Sbjct: 147 QIIFHGAEPLIAR----EAIFAAIDAFK--DRFRFGLQTNATL---LTDKAAEFLTSRGV 197

Query: 206 PVYIAI 211
            + +++
Sbjct: 198 GIGLSL 203


>gi|325919115|ref|ZP_08181174.1| GTP cyclohydrolase subunit MoaA [Xanthomonas gardneri ATCC 19865]
 gi|325550424|gb|EGD21219.1| GTP cyclohydrolase subunit MoaA [Xanthomonas gardneri ATCC 19865]
          Length = 344

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 64/187 (34%), Gaps = 41/187 (21%)

Query: 89  IVHRY--PDRIL-LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEK 141
           +  RY  P R L L ++  C   C +C   + V    G      LS    E  +      
Sbjct: 14  MQDRYGRPLRDLRLSVIEACNFRCGYCMPADRVPDDYGFDAQQRLSFDQLETLVRAFVS- 72

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRV 184
             + +V  TGG+PL+     L  ++  L  I  ++ L                     R 
Sbjct: 73  VGVTKVRLTGGEPLLRRD--LPSLVARLTAIDGIEDLALTTNGTLLARQAVALRQAGLRR 130

Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVL 243
             V    ++PEL + +      +              + +A I+    AG   L    V+
Sbjct: 131 ITVSMDALDPELFRRMSGNRGEIA-------------QVLAGIAAAEQAGFQRLKINCVV 177

Query: 244 LKGINDD 250
            +GIN+D
Sbjct: 178 QRGINED 184


>gi|304391259|ref|ZP_07373203.1| molybdenum cofactor biosynthesis protein A [Ahrensia sp. R2A130]
 gi|303296615|gb|EFL90971.1| molybdenum cofactor biosynthesis protein A [Ahrensia sp. R2A130]
          Length = 348

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 31/167 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-- 156
           + +   C   C +C   +M    K  +L+ ++ +   +       + ++  TGG+PL+  
Sbjct: 33  VSVTDRCDFRCVYCMAEDMTFLPKRDLLTLEELDRMCSAF-VDKGVRKLRLTGGEPLVRK 91

Query: 157 --------LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                   LS  R    L  L    +       S++      +   EL+ C  E    V 
Sbjct: 92  GIMGLFRSLSRHRTSGALDELTLTTN------GSQL-----AKYASELVDCGVE-RVNVS 139

Query: 209 IAIHANHP--YEFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248
           I    +H    E +        +  +     AG+ +   +V LKG+N
Sbjct: 140 IDT-LDHAKFREITRWGDLGRVMEGLEAARAAGLAVKINAVALKGVN 185


>gi|294811786|ref|ZP_06770429.1| Radical SAM domain-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294324385|gb|EFG06028.1| Radical SAM domain-containing protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 877

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 18/127 (14%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY----IQEKSQIW-----EV 147
           I+LK+   C + C  C+  E              T+ A+++    + E ++        V
Sbjct: 11  IVLKVHSRCDLACDHCYIYEHA-DHSWRNRPRAITDEAISWTALRLAEHAKNHALPSVSV 69

Query: 148 IFTGGDPLILSHKRLQKVLKTL-RYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAG 204
           I  GG+PL+   +RL++V   L   +  V    LR H+        ++ P  ++   E G
Sbjct: 70  ILHGGEPLLAGTERLRRVCAELTSALDGVAALDLRIHTNGL-----QLGPRYLELFDEFG 124

Query: 205 KPVYIAI 211
             V +++
Sbjct: 125 VRVGVSL 131


>gi|292493861|ref|YP_003529300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus halophilus
           Nc4]
 gi|291582456|gb|ADE16913.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus halophilus
           Nc4]
          Length = 447

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 24/151 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD- 153
             + ++  C  YC FC     V         S+  +  +A I + ++  + EV   G + 
Sbjct: 149 AFVSVMEGCSKYCSFC-----VVPYTRGEEISRPLDDVIAEIVDLAEQGVREVTLLGQNV 203

Query: 154 -----PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                P+       L  ++  +  I+ ++ +RF +  P+      +  LIQ   E  +  
Sbjct: 204 NAYRGPMGEGDIADLALLITYVASIEGIERIRFTTSHPV----EFSDSLIQAFAEVPE-- 257

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILL 238
            +  H + P +        I  L   G  +L
Sbjct: 258 -LVSHLHLPVQ---SGSDRILSLMKRGHTVL 284


>gi|282858466|ref|ZP_06267644.1| radical SAM domain protein [Prevotella bivia JCVIHMP010]
 gi|282588758|gb|EFB93885.1| radical SAM domain protein [Prevotella bivia JCVIHMP010]
          Length = 447

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 7/75 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156
           L     C   C +C+ +          +S    ++ + +I    Q+  V  T  GG+PL+
Sbjct: 103 LAPTSSCNFVCPYCYEKSKPN----NTMSDSTIDSLIKFINGHEQVKTVGITWYGGEPLV 158

Query: 157 LSHKRLQKVLKTLRY 171
              + ++K+++ +  
Sbjct: 159 A-FETIKKIVERIDS 172


>gi|257462243|ref|ZP_05626660.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|317059912|ref|ZP_07924397.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
 gi|313685588|gb|EFS22423.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           sp. D12]
          Length = 348

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 13/119 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYIQEKS--QIWEVI 148
           ++ +  +      CP +C FC ++++ G +    +  +D    +  Y++        EV 
Sbjct: 2   KHYNIPIFISHFGCPNHCVFCNQQKINGQETDIRV--EDIHRIVREYLKTLPKKSEKEVA 59

Query: 149 FTGGDPLILSHKRLQKVLKTL-RYIKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           F GG    LS +  ++ L+TL  Y++   +Q +R  +R     P  I  E+++ LK+ G
Sbjct: 60  FFGGTFTGLSMELQREYLETLQEYMERGDIQGIRLSTR-----PDYIRKEILEQLKKYG 113


>gi|224825445|ref|ZP_03698550.1| Radical SAM domain protein [Lutiella nitroferrum 2002]
 gi|224602366|gb|EEG08544.1| Radical SAM domain protein [Lutiella nitroferrum 2002]
          Length = 354

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 41/215 (19%)

Query: 104 VCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161
            C V C FC    M G       L S +  A +A  +    + +V+F G G+P       
Sbjct: 107 GCAVGCTFC----MTGKSGLLRQLGSAEIAAQVALARRIRPVKKVVFMGMGEPAHNLDNV 162

Query: 162 LQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPYE 218
           L  +   L    H+  + L   +   + DP R+   L Q   +  KP + +++H     E
Sbjct: 163 LDAI-DLLGSDGHIGHKNLVLST---VGDP-RVFERLPQ---QHVKPALALSLHTTRA-E 213

Query: 219 FSEEAIAAISR-------------LANAGIILLSQSVLLKGINDDPEILANLMRTFVE-- 263
              + +    R                 G  +  Q  LL G+ND  E +   +R      
Sbjct: 214 LRAQLLPRAPRYDPAELVALGEDYARRVGYPIQYQWTLLAGVNDTQEEMDAAVRLLKGKY 273

Query: 264 --LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
             L I PY     +   G  H++    E   ++  
Sbjct: 274 GVLNIIPY-----NSVEG-DHYQRPSAERIHLMKR 302


>gi|39998330|ref|NP_954281.1| radical SAM domain-containing protein [Geobacter sulfurreducens
           PCA]
 gi|39985276|gb|AAR36631.1| radical SAM domain protein [Geobacter sulfurreducens PCA]
          Length = 812

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 48/192 (25%)

Query: 55  PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           P+ R+F+    EL                +P+   +    DR+ +++   C   CRFC  
Sbjct: 204 PVKRRFL---AELEPAAY---------PTAPVVPFLKTIHDRVSVEISRGCTRGCRFCQA 251

Query: 115 REMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
             +    +           ++T  A  Y     +I  +  + GD   L+      +L  L
Sbjct: 252 GYLYRPVRERSPEKILALVEETLRATGY----DEISLLSLSTGDYGCLTP-----LLTEL 302

Query: 170 RYIKHVQILRFHS-RVPIVDP-QRI---NPELIQCLKEAGKPVYIAIHANHPYEFSEEA- 223
                    R+ S R+ +  P  R+   N EL++ ++   K  +           + EA 
Sbjct: 303 MA-------RYASERIAVSLPSMRVGSLNDELVEAIRTVRKTGFT---------LAPEAG 346

Query: 224 IAAISRLANAGI 235
              + R+ N GI
Sbjct: 347 SERLRRVINKGI 358


>gi|134299776|ref|YP_001113272.1| MiaB-like tRNA modifying protein YliG [Desulfotomaculum reducens
           MI-1]
 gi|238065335|sp|A4J5U4|RIMO_DESRM RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|134052476|gb|ABO50447.1| SSU ribosomal protein S12P methylthiotransferase [Desulfotomaculum
           reducens MI-1]
          Length = 444

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 27/142 (19%)

Query: 79  GDNNHSPLKGIVHRYPD-----------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           G + H+ ++ +++ Y +              +K+   C   C +C               
Sbjct: 119 GKDRHTRVEDLLYIYDEHSPRLLSTPSYTAYVKIAEGCDNRCAYC-----AIPDIRGKFR 173

Query: 128 SKDTEAALAYIQEKSQ--IWEVIFTGGD----PLILSHK-RLQKVLKTLRYIKHVQILRF 180
           S+  E+  A +++  +  + E+I    D     L L  + RL ++L+ L  I+ +Q +R 
Sbjct: 174 SRPIESIEAEVKDLVEKGVREIILIAQDTTRYGLDLYGEYRLDQLLERLGPIQGLQWIRL 233

Query: 181 HSRVPIVDPQRINPELIQCLKE 202
                   P R   +LI+ + E
Sbjct: 234 ----LYCYPNRFTDQLIKAMAE 251


>gi|189347396|ref|YP_001943925.1| Radical SAM domain protein [Chlorobium limicola DSM 245]
 gi|189341543|gb|ACD90946.1| Radical SAM domain protein [Chlorobium limicola DSM 245]
          Length = 376

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/95 (15%), Positives = 40/95 (42%), Gaps = 12/95 (12%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWE 146
           ++ + P  + + + + C + CR C+      S      +  +T   L + +E ++  +  
Sbjct: 5   LIMKTPRSVDIDITNRCNLRCRHCY----YYSSDAETPTELETAEWLRFFRELNECSVLR 60

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
           V+  GG+P +      ++++  +        +RF 
Sbjct: 61  VVLAGGEPFMRED--FRELIDGIVK----NRMRFG 89


>gi|229084333|ref|ZP_04216614.1| Radical SAM domain protein [Bacillus cereus Rock3-44]
 gi|228698990|gb|EEL51694.1| Radical SAM domain protein [Bacillus cereus Rock3-44]
          Length = 468

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 9/119 (7%)

Query: 58  RQFIPQKEEL-NILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKLLHVCPVYCRFCFRR 115
           R+ I   EEL N      ED   +     +     + Y   + L + H C + C +CF  
Sbjct: 63  RETIADIEELKNDRQLFTED---EYKSLSIDLTNRKTYVKALCLNVAHTCNLSCEYCFAS 119

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           +   +    ++S +  + A+ Y+ E     +  ++ F GG+PL+   K +++++   R 
Sbjct: 120 QGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDFFGGEPLMA-WKVVKQIVAYARS 177


>gi|320353874|ref|YP_004195213.1| Radical SAM domain-containing protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122376|gb|ADW17922.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032]
          Length = 295

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 18/91 (19%)

Query: 97  ILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEA-------ALAYIQEKSQIWEVI 148
           ++L++   C    C FC      G+ +     SK  E        A A+ + +     + 
Sbjct: 23  LILQVTTGCSHNRCTFC------GAYRDKPFQSKSWEQIEADLAFAAAWCRRQ---TTLF 73

Query: 149 FTGGDPLILSHKRLQKVLKTLRY-IKHVQIL 178
              GD L L H+RL  +L+ +R  +  ++ +
Sbjct: 74  LADGDVLALPHERLVALLERIREQLPWIRRV 104


>gi|119773547|ref|YP_926287.1| hypothetical protein Sama_0407 [Shewanella amazonensis SB2B]
 gi|119766047|gb|ABL98617.1| conserved hypothetical protein [Shewanella amazonensis SB2B]
          Length = 294

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 12/89 (13%)

Query: 97  ILLKLLHVCP-VYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           ++L++ + C    CRFC      ++     ++  +    D + A         I  V   
Sbjct: 18  LILQVTNGCSYNRCRFCDMYTAEQKRFRAFKEDKI--EADLKQAA---ASGVPIRRVFLA 72

Query: 151 GGDPLILSHKRLQKVLKTL-RYIKHVQIL 178
            GD + L   RL+ +L  + RY+  V  +
Sbjct: 73  DGDAMTLPFSRLEAILLLIHRYLPDVSRI 101


>gi|34581161|ref|ZP_00142641.1| hypothetical protein [Rickettsia sibirica 246]
 gi|28262546|gb|EAA26050.1| unknown [Rickettsia sibirica 246]
          Length = 445

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)

Query: 76  DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           D + +     L      YP      + +   C  +C FC     V         S++ E 
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185

Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
                    +  +V+ +G   ++L               +   L  +LK L  I +++ L
Sbjct: 186 VFR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239

Query: 179 RFHSRVPI 186
           R+ +  PI
Sbjct: 240 RYTTSHPI 247


>gi|313680864|ref|YP_004058603.1| 23S rRNA m(2)a-2503 methyltransferase [Oceanithermus profundus DSM
           14977]
 gi|313153579|gb|ADR37430.1| 23S rRNA m(2)A-2503 methyltransferase [Oceanithermus profundus DSM
           14977]
          Length = 370

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 45/199 (22%), Positives = 74/199 (37%), Gaps = 40/199 (20%)

Query: 93  YPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVI 148
           Y DR  + +     CP  C FC   +M   +  T     D   A+AY Q     +I  V+
Sbjct: 124 YADRKTVCISSQVGCPAGCTFCATGKMGFGRNLTGPEILDQILAVAYHQGLGPREIRNVV 183

Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELIQCLK 201
             G G+PL L+++ +   ++ +                 + P+RI       P  I+ L 
Sbjct: 184 LMGMGEPL-LNYENIAWAVRRMLDKN----------ALAMSPRRITLSTVGIPGGIRRLA 232

Query: 202 E--AGKPVYIAIHA------------NHPYEFSE--EAIAAISRLANAGIILLSQSVLLK 245
           E   G  + +++HA             H Y  +E  EA+ A        + +     +L+
Sbjct: 233 EGDLGVKLALSLHAPDDETRRRIIPTAHRYSIAEIMEAVRAYFDRTKRRVTIE--YTMLR 290

Query: 246 GINDDPEILANLMRTFVEL 264
            +ND  E    L R    L
Sbjct: 291 DVNDREEQARELARILKGL 309


>gi|313886783|ref|ZP_07820489.1| tRNA methylthiotransferase YqeV [Porphyromonas asaccharolytica
           PR426713P-I]
 gi|312923747|gb|EFR34550.1| tRNA methylthiotransferase YqeV [Porphyromonas asaccharolytica
           PR426713P-I]
          Length = 454

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 15/124 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
             R  LK+   C  YC +C      G S+ G++ S       +A +       E+I TG 
Sbjct: 165 RTRHFLKVQDGCNYYCTYCTIPAARGISRNGSIASLVAQAERVAELGG----KEIILTGV 220

Query: 152 --GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
             GD    + + L ++L  L  +  +   R  S    ++P+ + PE+IQ + E  +    
Sbjct: 221 NIGDFGRTTGETLLELLHQLTQVAGIARYRIGS----IEPELLTPEIIQFVAETAQ---F 273

Query: 210 AIHA 213
             H 
Sbjct: 274 MPHF 277


>gi|313203633|ref|YP_004042290.1| miab-like tRNA modifying enzyme [Paludibacter propionicigenes WB4]
 gi|312442949|gb|ADQ79305.1| MiaB-like tRNA modifying enzyme [Paludibacter propionicigenes WB4]
          Length = 436

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 26/146 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCF------RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
             R  LK+   C  +C +C       R       +   ++ +  EA            E+
Sbjct: 148 RTRYFLKVQDGCDYFCTYCTIPYARGRSRNATIPETVAMAMQAVEAGA---------KEI 198

Query: 148 IFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           + +G   GD    + +    ++K L  I      R  S    ++P  +  E+I  +  + 
Sbjct: 199 VLSGVNIGDFGKSTGESFFDLVKALDTIPADVRFRISS----IEPNLLTDEIITYISTSH 254

Query: 205 KPVYIAIHANHP-YEFSEEAIAAISR 229
           +      H + P    + E +  + R
Sbjct: 255 R---FMPHFHIPLQSGTNEVLQLMKR 277


>gi|253701529|ref|YP_003022718.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M21]
 gi|251776379|gb|ACT18960.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M21]
          Length = 326

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 30/168 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C   + V   +   +LS ++          +  I ++  TGG+PL+ 
Sbjct: 16  LSVTDRCNMRCSYCMPAQGVEKLEHKEMLSYEELYRVAGACIAQ-GIEKIRVTGGEPLV- 73

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
             K L   L+ L  +  ++ L   +            E+ Q LK AG   + I++     
Sbjct: 74  -RKGLVPFLERLSRVPGLKELVLTTNGLQ------LEEMAQPLKRAGVARLNISL----- 121

Query: 217 YEFSEEAIAAISR---LAN----------AG-IILLSQSVLLKGINDD 250
                E  A I+R   L            AG   L    V+++G+NDD
Sbjct: 122 DSLRPEVFARITRGADLKRVLSGIEAAEKAGFANLKINMVVMRGVNDD 169


>gi|15674140|ref|NP_268315.1| hypothetical protein L16911 [Lactococcus lactis subsp. lactis
           Il1403]
 gi|12725218|gb|AAK06256.1|AE006444_7 unknown protein [Lactococcus lactis subsp. lactis Il1403]
          Length = 275

 Score = 38.5 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P ++ + L + C   C +CF +EM       + S +D E    Y+++   +  V   GGD
Sbjct: 10  PIKVYIYLTNHCHYECDYCFLKEMKMLNTKEI-SKEDLEKIAYYLEKYK-VPLVAICGGD 67

Query: 154 PLILSHKRLQKVLKTLRYIKH 174
           P++    +L   ++ L   K+
Sbjct: 68  PILHP--KLIDFVQLLSEHKN 86


>gi|301627665|ref|XP_002942990.1| PREDICTED: molybdenum cofactor biosynthesis protein 1-like [Xenopus
           (Silurana) tropicalis]
          Length = 649

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           G  H Y   + + L   C + C++C   E V     + L +     ALA +  +  + ++
Sbjct: 69  GRQHNY---LRISLTEKCNLRCQYCMPEEGVQLTPKSELLTTQEIVALARLFVQEGVNKI 125

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             TGG+PLI        ++  LR ++ ++ +
Sbjct: 126 RLTGGEPLIRPDVV--DIVAQLRKLEGLKTI 154


>gi|283471147|emb|CAQ50358.1| conserved protein YfkA [Staphylococcus aureus subsp. aureus ST398]
          Length = 383

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 16/126 (12%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++  P E  + + ++    L  I             ++C + C  C             +
Sbjct: 12  IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 58

Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
             +  +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +      
Sbjct: 59  DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGIYIQMNS 117

Query: 185 PIVDPQ 190
            +  PQ
Sbjct: 118 NLTLPQ 123


>gi|289192724|ref|YP_003458665.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
 gi|288939174|gb|ADC69929.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
          Length = 280

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           +Y   ++LK+ + C + C +C+      ++    +  K  ++A+ Y+       ++ FTG
Sbjct: 2   KY---LILKVTNRCNLNCLYCY----ANNENNKDMDFKTAKSAIDYLLSLDNNLKIQFTG 54

Query: 152 GDPLILSHKRLQKVLK 167
           G+PL L+ K ++KV+ 
Sbjct: 55  GEPL-LNFKLIEKVVD 69


>gi|229825006|ref|ZP_04451075.1| hypothetical protein GCWU000182_00355 [Abiotrophia defectiva ATCC
           49176]
 gi|229790753|gb|EEP26867.1| hypothetical protein GCWU000182_00355 [Abiotrophia defectiva ATCC
           49176]
          Length = 449

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 51/131 (38%), Gaps = 27/131 (20%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            +R  +K+   C  +C +C     R  +       ++  ++T+  +      +   E++ 
Sbjct: 145 KNRANIKIQDGCDQFCTYCIIPFVRGRIRSRDMEGIV--EETDRLVK-----AGFREMVL 197

Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           T       G D  I    R+ ++L  L  ++    +R  S    V+P+ I  E ++ L +
Sbjct: 198 TGIHIGSYGRD--IDGESRMLELLTELNKVEGDFRIRLGS----VEPRLITEEFLEGLVK 251

Query: 203 AGKPVYIAIHA 213
             K   +  H 
Sbjct: 252 LKK---VCPHF 259


>gi|188995948|ref|YP_001930200.1| putative Fe-S oxidoreductase [Porphyromonas gingivalis ATCC 33277]
 gi|188595628|dbj|BAG34603.1| putative Fe-S oxidoreductases [Porphyromonas gingivalis ATCC 33277]
          Length = 444

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  LK+   C  +C +C     R         +++   +  AA    +   +I     
Sbjct: 150 RTRHFLKVQDGCDYHCSYCTIPKARGRSRNGSIESLVRQAEAVAA----EGGKEIVLTGV 205

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
             GD    + +    +L+ L  ++ ++  R  S    ++P  ++ ELI     +   +  
Sbjct: 206 NIGDFGRSTGETFLDLLRALDQVEGIERYRIGS----IEPNLLSDELID-FCASAHRIAP 260

Query: 210 AIH 212
             H
Sbjct: 261 HFH 263


>gi|187932848|ref|YP_001886192.1| thiamine biosynthesis protein ThiH [Clostridium botulinum B str.
           Eklund 17B]
 gi|187721001|gb|ACD22222.1| putative thiazole biosynthesis protein [Clostridium botulinum B
           str. Eklund 17B]
          Length = 472

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 5/100 (5%)

Query: 80  DNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
           +  H   K I  + Y +RI+    L L + C   C +C             L+ ++ +  
Sbjct: 66  EKIHDLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCTYCPYHHQNKHISRKKLTQEEIKRE 125

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
           +  +Q+       + TG DP+    + + + +KT+  IKH
Sbjct: 126 VIALQDMGHKRLALETGEDPINNPIEYVLESIKTIYSIKH 165


>gi|168206414|ref|ZP_02632419.1| putative radical SAM domain protein [Clostridium perfringens E str.
           JGS1987]
 gi|170662155|gb|EDT14838.1| putative radical SAM domain protein [Clostridium perfringens E str.
           JGS1987]
          Length = 370

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 13/110 (11%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           YP  I +K+   C   C+ CF      +     +SS   +  +    +++  +++  TGG
Sbjct: 42  YPILIGIKITDKCNFSCKHCFSN----NSNFNEISSNLVDNIINNFLKENHPYKIYLTGG 97

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           +P +  +K +  +++ L+   + +I   HS         I  +L + L  
Sbjct: 98  EPFL--NKNIFNIIQKLK--PYCKIFSIHSNA-----SLITNDLAKKLSN 138


>gi|326407735|gb|ADZ64806.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis
           subsp. lactis CV56]
          Length = 275

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P ++ + L + C   C +CF +EM       + S +D E    Y+++   +  V   GGD
Sbjct: 10  PIKVYIYLTNHCHYECDYCFLKEMKMLNTKEI-SKEDLEKIAYYLEKYK-VPLVAICGGD 67

Query: 154 PLILSHKRLQKVLKTLRYIKH 174
           P++    +L   ++ L   K+
Sbjct: 68  PILHP--KLIDFVQLLSEHKN 86


>gi|291563521|emb|CBL42337.1| SSU ribosomal protein S12P methylthiotransferase
           [butyrate-producing bacterium SS3/4]
          Length = 445

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 10/109 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
             LK+   C   C +C    + G  +   +  +        + EK     ++      L 
Sbjct: 146 AFLKIAEGCDKRCTYCIIPYLRGKYR--SVPMEQLVREAEELAEKGVKELILVAQETTLY 203

Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
                  K+L ++L+ L  +  +Q +R         P+ I  ELI+ +K
Sbjct: 204 GKDLYGEKKLPELLRRLAAVSGIQWIRLQ----YCYPEEITDELIETIK 248


>gi|281492812|ref|YP_003354792.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis
           subsp. lactis KF147]
 gi|281376464|gb|ADA65950.1| Fe-S oxidoreductase, radical SAM superfamily [Lactococcus lactis
           subsp. lactis KF147]
          Length = 275

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P ++ + L + C   C +CF +EM       + S +D E    Y+++   +  V   GGD
Sbjct: 10  PIKVYIYLTNHCHYECDYCFLKEMKMLNTKEI-SKEDLEKIAYYLEKYK-VPLVAICGGD 67

Query: 154 PLILSHKRLQKVLKTLRYIKH 174
           P++    +L   ++ L   K+
Sbjct: 68  PILHP--KLIDFVQLLSEHKN 86


>gi|213963740|ref|ZP_03391990.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           sputigena Capno]
 gi|213953620|gb|EEB64952.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga
           sputigena Capno]
          Length = 454

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 9/79 (11%)

Query: 98  LLKLLHVCPVYCRFC-------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           L   L  C   C FC        R EM       VL  K+ +    +++E+ +I E+   
Sbjct: 54  LYIHLPFCESLCTFCGCHKRITKRHEMEIPYIEAVL--KEWQLYTDFLKERPRIKEIHLG 111

Query: 151 GGDPLILSHKRLQKVLKTL 169
           GG P      +L+++++ +
Sbjct: 112 GGTPTFFQPSQLRRLIEGI 130


>gi|170729111|ref|YP_001763137.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC
           51908]
 gi|169814458|gb|ACA89042.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC
           51908]
          Length = 326

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 61/160 (38%), Gaps = 17/160 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +  VC   C +C       + +   L+  + E  +A   E     ++  TGG+P +  
Sbjct: 17  MSVTDVCNFKCTYCLPDGYRPNGRSKFLALSEIENLVAAFAE-VGTQKIRITGGEPTLRK 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
                 +++ +    + +I    +     +  R+     +      + + +++ +  P  
Sbjct: 76  D--FTDIIRAVA--DNDKIKTIAT---TTNGYRLEKHAKEWYDAGLRRINVSVDSLDPKM 128

Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
             + +      E +  I    +AG   +   +VLLKG+ND
Sbjct: 129 FYQITGENKFDEVMRGIDAALDAGFERVKINAVLLKGLND 168


>gi|90022940|ref|YP_528767.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Saccharophagus
           degradans 2-40]
 gi|122995883|sp|Q21FH4|MIAB_SACD2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|89952540|gb|ABD82555.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Saccharophagus degradans
           2-40]
          Length = 454

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 13/113 (11%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
              + ++  C  YC FC      G +      + D    + ++  +  + EV   G +  
Sbjct: 156 TAFVSVMEGCSKYCTFCVVPYTRGEEVSR--PAVDVLREVTHLASQ-GVREVNLLGQNVN 212

Query: 156 ILSHKR------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
                       L +++  +  I  +  +RF +      P      LIQ   E
Sbjct: 213 AYRDDSSGEVIDLAELIAAVADIDGIDRIRFTTSH----PMEFTESLIQAYAE 261


>gi|326204016|ref|ZP_08193877.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
 gi|325985783|gb|EGD46618.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782]
          Length = 456

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  I   +   C   CR+C+      + +   L+ ++    +        ++++++TGG+
Sbjct: 114 PKTISFHVTSTCNKECRYCYLDAKRENLEKDALTFEEVVRMIDE-AAAIGVYKILYTGGE 172

Query: 154 PLILSHKRLQKVLK 167
           P +     L  +++
Sbjct: 173 PFLRKD--LLDIIE 184


>gi|304316648|ref|YP_003851793.1| MiaB-like protein tRNA modifying enzyme [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778150|gb|ADL68709.1| MiaB-like protein tRNA modifying enzyme [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 452

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  LK+   C  +C +C     +       + S+  +  L  ++    +   EVI TG
Sbjct: 161 HTRAYLKIQDGCNQFCTYC-----IIPYARGPVRSRRPDNILDEVKRLRDNGYKEVILTG 215

Query: 152 GDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                    L +  L  ++K +  +  ++ +R  S  P         + I+ +    K
Sbjct: 216 IHVASYGKDLENINLLDIIKMIHEVDGIERIRMSSIEPTFL----TEDFIKEVASLPK 269


>gi|221232993|ref|YP_002515429.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Caulobacter
           crescentus NA1000]
 gi|220962165|gb|ACL93521.1| tRNA 2-methylthioadenosine synthase [Caulobacter crescentus NA1000]
          Length = 448

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 15/121 (12%)

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           +   +E+ D +    H  + G+         L +   C  +C FC      G +    ++
Sbjct: 136 DFAADEKFDALPAERH--VTGVT------AFLTVQEGCDKFCTFCVVPYTRGGEWSRPVN 187

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH---KRLQKVLKTLRYIKHVQILRFHSRV 184
               E A         + EV   G + +         L K+++ L  I  +  +R+ +  
Sbjct: 188 -DIVEEAKR--LADQGVREVTLLGQN-VNAYDGDGSTLAKLVRQLAKIDGLDRIRYTTSH 243

Query: 185 P 185
           P
Sbjct: 244 P 244


>gi|157826266|ref|YP_001493986.1| hypothetical protein A1C_06245 [Rickettsia akari str. Hartford]
 gi|229890630|sp|A8GQ03|MIAB_RICAH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157800224|gb|ABV75478.1| hypothetical protein A1C_06245 [Rickettsia akari str. Hartford]
          Length = 445

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 48/137 (35%), Gaps = 26/137 (18%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRI--LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           D + +     L      YP      + +   C  +C FC     V         S++ E 
Sbjct: 133 DFVEEAKFDNLP--EQLYPQGASSFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185

Query: 134 ALAYIQEKSQI----WEVIFTGGDPLILSHK-------RLQKVLKTLRYIKHVQILRFHS 182
              Y +    +     E++  G +    + K        L  +LK L  I +++ LR+ +
Sbjct: 186 V--YREALQVVSGGAKEIMLLGQNVNAYNWKGSADKIFSLADLLKHLAQIPNLERLRYMT 243

Query: 183 RVPIVDPQRINPELIQC 199
             PI     +  +LIQ 
Sbjct: 244 SHPID----MTDDLIQL 256


>gi|325955310|ref|YP_004238970.1| MiaB-like tRNA modifying enzyme [Weeksella virosa DSM 16922]
 gi|323437928|gb|ADX68392.1| MiaB-like tRNA modifying enzyme [Weeksella virosa DSM 16922]
          Length = 444

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 20/131 (15%), Positives = 42/131 (32%), Gaps = 23/131 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C   C +C       +          K+             I E++ TG
Sbjct: 144 RTRAFLKVQDGCDYKCTYCTIPLARGISRSDELHNVLKNAREI-----ANQDIKEIVLTG 198

Query: 152 ---GDPLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
              GD                ++++ L  + +++ +R  S    ++P  +  E I  + +
Sbjct: 199 VNIGDYGKGEFGNKKHEHTFLELVEALDEVDNIERIRISS----IEPNLLKNETISFVAQ 254

Query: 203 AGKPVYIAIHA 213
           + +      H 
Sbjct: 255 SKR---FVPHF 262


>gi|299145602|ref|ZP_07038670.1| 2-methylthioadenine synthetase [Bacteroides sp. 3_1_23]
 gi|298516093|gb|EFI39974.1| 2-methylthioadenine synthetase [Bacteroides sp. 3_1_23]
          Length = 436

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 68/227 (29%), Gaps = 71/227 (31%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G         ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--HHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G D      + L ++++ +  I  V+ +R H       P     +L + ++E        
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
                           +                L+ I+D+   +  LMR           
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
                         ++ E+  +++   + ++ G+  +   ++  PG 
Sbjct: 268 --------------VSKEDTYQLIEQFRREVPGIHLRTTLMVGHPGE 300


>gi|253999825|ref|YP_003051888.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylovorus sp. SIP3-4]
 gi|313201799|ref|YP_004040457.1| tRNA-i(6)a37 thiotransferase enzyme miab [Methylovorus sp. MP688]
 gi|253986504|gb|ACT51361.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylovorus sp. SIP3-4]
 gi|312441115|gb|ADQ85221.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylovorus sp. MP688]
          Length = 443

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 22/135 (16%)

Query: 91  HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQI 144
           H  P R+      L ++  C  YC FC     V   +G   S    +  +  IQ  +  +
Sbjct: 140 HLPPPRVEGAAAFLSIMEGCNKYCSFCV----VPYTRGEEFSRPFEDILVEAIQLAEQGV 195

Query: 145 WEVIFTGGDP-------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197
            E+   G +           +   L  ++  +  I  ++ +RF +      P  ++  LI
Sbjct: 196 KEITLLGQNVNAYRSTSADGTAADLAMLIDYIAEIPQIERIRFTTSH----PNEMSEALI 251

Query: 198 QCLKEAGKPVYIAIH 212
            C     K +   +H
Sbjct: 252 DCFARIPK-LVSHLH 265


>gi|210134483|ref|YP_002300922.1| miaB-like tRNA modifying enzyme [Helicobacter pylori P12]
 gi|210132451|gb|ACJ07442.1| miaB-like tRNA modifying enzyme [Helicobacter pylori P12]
          Length = 418

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHS 182
            +           + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDKESNIARLIKKLSQIAGLKRIRIGS 221


>gi|78222909|ref|YP_384656.1| cobalamin B12-binding/radical SAM family protein [Geobacter
           metallireducens GS-15]
 gi|78194164|gb|ABB31931.1| Cobalamin B12-binding/Radical SAM [Geobacter metallireducens GS-15]
          Length = 434

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 40/196 (20%), Positives = 70/196 (35%), Gaps = 41/196 (20%)

Query: 55  PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           P+ R  IP  + L I P  R D +             +Y     ++    CP  C FC  
Sbjct: 132 PLYRAPIPTDDRLVI-PWSRRDILA----------GRQYLTTQTVQASRGCPYDCPFCT- 179

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRY 171
              V    G     ++ +  LA ++       V       GDP+         +L+ +  
Sbjct: 180 ---VTPYFGRTFRYRNPDDVLAELRSFEGKLMVFVDDNILGDPVRAKP-----ILEGMAG 231

Query: 172 IKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIA-------IHANHPYEFSEE 222
           +     LR+  +  +    R   +PEL++ +  +G              HANH    +  
Sbjct: 232 M----NLRWGGQANL----RFAEDPELVKLVARSGCIGIFVGIESVTGPHANHAKTGNGS 283

Query: 223 AI-AAISRLANAGIIL 237
           +    + R+ +AGI+L
Sbjct: 284 SQIDLVKRVRDAGIVL 299


>gi|332882828|ref|ZP_08450439.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332679330|gb|EGJ52316.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 435

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 23/131 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  LK+   C   C +C            +  S   E  L+  +      I E++ TG
Sbjct: 140 RTRAFLKVQDGCDYKCTYCTI-----PMARGISRSDTIENILSNAKKISDKGIKEIVLTG 194

Query: 152 ---GDPLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
              GD                ++++ L  ++ ++ LR  S    ++P  I  E I  + +
Sbjct: 195 VNIGDYGKGEFGNKKHEHTFLELVEALDKVEGIERLRISS----IEPNLIKDETIDFIAQ 250

Query: 203 AGKPVYIAIHA 213
           +        H 
Sbjct: 251 SN---SFVPHF 258


>gi|332673126|gb|AEE69943.1| possible 2-methylthioadenine synthase [Helicobacter pylori 83]
          Length = 418

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C     V  +  +    K  E     +     + EV+ TG +
Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCSKGVQEVVLTGTN 189

Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
                  +   + +++K L  I  ++ +R  S
Sbjct: 190 VGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|332526652|ref|ZP_08402757.1| molybdenum cofactor biosynthesis protein A [Rubrivivax
           benzoatilyticus JA2]
 gi|332110913|gb|EGJ11090.1| molybdenum cofactor biosynthesis protein A [Rubrivivax
           benzoatilyticus JA2]
          Length = 372

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F R         +LS ++     +       + ++  TGG+
Sbjct: 44  ISVTDRCNFRCGYCMPSEVFDRRYRFLPHDALLSFEEITRVASVFLAH-GVRKLRLTGGE 102

Query: 154 PLILSHKRLQKVLKTLRYIKHV 175
           PL+   K+L  +++ L  ++ V
Sbjct: 103 PLL--RKQLPSLVEQLAALRTV 122


>gi|301053446|ref|YP_003791657.1| coenzyme PQQ synthesis protein [Bacillus anthracis CI]
 gi|300375615|gb|ADK04519.1| coenzyme PQQ synthesis protein [Bacillus cereus biovar anthracis
           str. CI]
          Length = 404

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 36  PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 91

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 92  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 142

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H        +  + AI  L    I +   +V+     D  E +A L+  
Sbjct: 143 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 202

Query: 261 F 261
            
Sbjct: 203 L 203


>gi|290474036|ref|YP_003466910.1| molybdopterin biosynthesis protein A [Xenorhabdus bovienii SS-2004]
 gi|289173343|emb|CBJ80120.1| molybdopterin biosynthesis protein A [Xenorhabdus bovienii SS-2004]
          Length = 326

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 40/218 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  VC   C +C           + LS  +         E     ++  TGG+P +  
Sbjct: 17  LSITDVCNFRCTYCLPDGYHPHGHQSFLSLPEIRRVSRAFAELGT-EKIRLTGGEPTMRR 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
                 ++ T+     ++ +   +        R+  ++ +  KEAG    I +  +   P
Sbjct: 76  D--FCDIIATVHENPQIKKIAITTNG-----YRMERDVARW-KEAGLT-AINVSVDSLDP 126

Query: 217 YEFSEEAIA--------AISRLANAGII-LLSQSVLLKGINDD--PEILANLMRTFVELR 265
            +F               I    +AG   +   +VL+K +ND   P  LA +    ++LR
Sbjct: 127 RQFHAITGQDKFFQIMRGIDAAFDAGFSAVKVNAVLMKNVNDTSLPAFLAWIKHRPIQLR 186

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
                     +  G         EG ++    +  +SG
Sbjct: 187 ------FIELMETG---------EGSELFR--RRHLSG 207


>gi|317127531|ref|YP_004093813.1| YfkB-like domain-containing protein [Bacillus cellulosilyticus DSM
           2522]
 gi|315472479|gb|ADU29082.1| YfkB-like domain-containing protein [Bacillus cellulosilyticus DSM
           2522]
          Length = 371

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 35/83 (42%), Gaps = 4/83 (4%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     ++C + C  C     + ++    L  +     L  +++   +  +  TGG+P +
Sbjct: 30  VEFTTTNICNMRCEHCAVGYSLQTKDPEALPLELFTQRLDEVKD---LRALSITGGEP-M 85

Query: 157 LSHKRLQKVLKTLRYIKHVQILR 179
           +S K ++  +  L    H + +R
Sbjct: 86  MSMKSVKNYVLPLLKYAHERGIR 108


>gi|281420874|ref|ZP_06251873.1| 2-methylthioadenine synthetase [Prevotella copri DSM 18205]
 gi|281405166|gb|EFB35846.1| 2-methylthioadenine synthetase [Prevotella copri DSM 18205]
          Length = 536

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 11/122 (9%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  YC +C      G+ +   + S     E A A  +   +I       
Sbjct: 239 RTRYFLKVQDGCNYYCTYCTIPFARGNSRNPSIQSLVAQCEQAAA--EGGKEIVITGVNI 296

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           GD    +H+R   ++K +  ++ ++  R  S    ++P   + +LI+   ++        
Sbjct: 297 GDFGQTTHERFIDLVKAMDQVEGIKRYRISS----LEPDLCDDDLIEYCAQSR---AFMP 349

Query: 212 HA 213
           H 
Sbjct: 350 HF 351


>gi|217033424|ref|ZP_03438854.1| hypothetical protein HP9810_1g38 [Helicobacter pylori 98-10]
 gi|216944129|gb|EEC23557.1| hypothetical protein HP9810_1g38 [Helicobacter pylori 98-10]
          Length = 418

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C     V  +  +    K  E     +     + EV+ TG +
Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCSKGVQEVVLTGTN 189

Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
                  +   + +++K L  I  ++ +R  S
Sbjct: 190 VGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|300814699|ref|ZP_07094949.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus sp. oral
           taxon 836 str. F0141]
 gi|300511172|gb|EFK38422.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus sp. oral
           taxon 836 str. F0141]
          Length = 467

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 16/125 (12%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW 145
           G    Y  +  + +++ C  +C FC     +         S++ +  +  I+        
Sbjct: 168 GANRLYSYKSYVNIMYGCNNFCTFC-----IVPYTRGREKSREADEIVDEIKSLIDKGSK 222

Query: 146 EVIFTGGDP-----LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           E+   G +       + +     ++L  +  IK V+ +RF +      P+ I+ ELI   
Sbjct: 223 EITLLGQNVNSYGRGLENKTTFAQLLYRINDIKGVERIRFMTSH----PKDISDELIYAF 278

Query: 201 KEAGK 205
           ++   
Sbjct: 279 RDLDH 283


>gi|166031330|ref|ZP_02234159.1| hypothetical protein DORFOR_01017 [Dorea formicigenerans ATCC
           27755]
 gi|166028735|gb|EDR47492.1| hypothetical protein DORFOR_01017 [Dorea formicigenerans ATCC
           27755]
          Length = 308

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 46/222 (20%), Positives = 82/222 (36%), Gaps = 47/222 (21%)

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ--KVLKTLRYIKHVQILRFH 181
            +LS ++ E        K+ I +   TGG+PL+    RL   +++  ++ I  V+ +   
Sbjct: 12  NILSYEEIEMVCQA-AAKAGIRKFKITGGEPLV----RLGCPELIGKIKKIPRVEQVTMT 66

Query: 182 SRVPI---VDPQRINPEL------IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232
           +   +     P+ +   L      +  L      V          E     + ++ +  +
Sbjct: 67  TNGVLLSKYLPELLKNGLDAVNISLDTLDRERYQV-----ITGRDELFR-VLESVDQAVD 120

Query: 233 AGIILLSQSVLLKGIN-DDPEILANL-MRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEE 289
           AGI +   SVL KG+N D+   L  L +   +++R          +  G    F     E
Sbjct: 121 AGIPVKINSVLQKGMNEDEFLALVRLTLEKKLDVR------FIEMMPIGLGKKFETIYNE 174

Query: 290 GQKIVASLKEKIS-----------GLCQPFYILDLPGGYGKV 320
              I+  LK++             G     Y+  LPGG G V
Sbjct: 175 --DILEELKKQYPDIQEDRQIHGNGPAV--YVK-LPGGQGSV 211


>gi|315924474|ref|ZP_07920696.1| PDZ domain protein [Pseudoramibacter alactolyticus ATCC 23263]
 gi|315622353|gb|EFV02312.1| PDZ domain protein [Pseudoramibacter alactolyticus ATCC 23263]
          Length = 457

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 52/206 (25%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C   C FCF  +M    + T+           YI++  +    ++  G+ + L++   
Sbjct: 88  RRCSNGCIFCFIDQMPPGMRDTL-----------YIKDDDERMSFLY--GNYITLTN--- 131

Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222
                 L   +  +I+R+H  +PI          ++            +H      F+  
Sbjct: 132 ------LSEAEKERIVRYHI-MPINISVHTTNPKLRR---------QMLH----NRFAGS 171

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHHPDLAAGTS 281
            +  +       I + SQ VL   +ND  E    L RT  +   + P       +  G +
Sbjct: 172 VMDDLQFFQKHEIAMNSQIVLCPEVNDGEE----LTRTLGDLAGLYPQMRSVSVVPLGMT 227

Query: 282 HFR---LTI-----EEGQK---IVAS 296
            FR     +     E+ ++   I+ +
Sbjct: 228 KFRKGLTPLKSVNREKARETIAIIEA 253


>gi|298507261|gb|ADI85984.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter sulfurreducens KN400]
          Length = 831

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 48/192 (25%)

Query: 55  PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           P+ R+F+    EL                +P+   +    DR+ +++   C   CRFC  
Sbjct: 223 PVKRRFL---AELEPAAY---------PTAPVVPFLKTIHDRVSVEISRGCTRGCRFCQA 270

Query: 115 REMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
             +    +           ++T  A  Y     +I  +  + GD   L+      +L  L
Sbjct: 271 GYLYRPVRERSPEKILALVEETLRATGY----DEISLLSLSTGDYGCLTP-----LLTEL 321

Query: 170 RYIKHVQILRFHS-RVPIVDP-QRI---NPELIQCLKEAGKPVYIAIHANHPYEFSEEA- 223
                    R+ S R+ +  P  R+   N EL++ ++   K  +           + EA 
Sbjct: 322 MA-------RYASERIAVSLPSMRVGSLNDELVEAIRTVRKTGFT---------LAPEAG 365

Query: 224 IAAISRLANAGI 235
              + R+ N GI
Sbjct: 366 SERLRRVINKGI 377


>gi|297569134|ref|YP_003690478.1| Protein of unknown function DUF2344 [Desulfurivibrio alkaliphilus
           AHT2]
 gi|296925049|gb|ADH85859.1| Protein of unknown function DUF2344 [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 848

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 44/227 (19%), Positives = 83/227 (36%), Gaps = 55/227 (24%)

Query: 55  PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           P+ R+ +   E++            D+  +PL        DR+ +++   C   CRFC  
Sbjct: 231 PVRRRVLADLEQV------------DHAVAPLVPATRVVHDRLGVEIARGCTRGCRFCQA 278

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
             +    +    S    +  L  I++    ++  +  + GD   + ++ L +++  L   
Sbjct: 279 GVIYRPVREREPSRV-LQEILGKIEQTGFEEVALLSLSSGDYACI-NELLGQLMDALER- 335

Query: 173 KHVQILRFHSRVPIVDP-QRI---NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228
                 R   RV +  P  R+    PE+++ +K   K  +           + EA +   
Sbjct: 336 ------R---RVSVSLPSMRVGSLTPEMMEQIKRVRKTGFT---------LAPEAGS--D 375

Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR---IKPYYLH 272
           RL           V+ KGI    E L    R+   L    IK Y++ 
Sbjct: 376 RLRR---------VINKGI--SEEDLLAASRSAFGLGWKLIKLYFMF 411


>gi|257065138|ref|YP_003144810.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
 gi|256792791|gb|ACV23461.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
          Length = 293

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)

Query: 94  PDRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTG 151
           P   LL++   C    C+FC    M    +  V S +D EA LA ++        +    
Sbjct: 14  PTWPLLEITAGCTHNKCKFCT---MYKGVRFDVRSIEDIEADLAELRTMVPHARTIQLLS 70

Query: 152 GDPLILSHKRLQKVLKTLRY 171
           G+PL L + RL+ +L+ +  
Sbjct: 71  GNPLALPYSRLKPILEKINE 90


>gi|196041174|ref|ZP_03108469.1| putative coenzyme PQQ synthesis protein [Bacillus cereus
           NVH0597-99]
 gi|196027882|gb|EDX66494.1| putative coenzyme PQQ synthesis protein [Bacillus cereus
           NVH0597-99]
          Length = 377

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 9   PFIVIWELTRACQLKCLHC-RAEAQYHRHSLELTFEEGKKLIDDIYEMENPML---VFTG 64

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 65  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 115

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H        +  + AI  L    I +   +V+     D  E +A L+  
Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 175

Query: 261 F 261
            
Sbjct: 176 L 176


>gi|114770160|ref|ZP_01447698.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
           HTCC2255]
 gi|114548997|gb|EAU51880.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium
           HTCC2255]
          Length = 442

 Score = 38.5 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 16/133 (12%)

Query: 75  EDPIGDN--NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
            D   ++   H P      R P    L +   C  +C FC         + +    +   
Sbjct: 128 TDFPEEDKFEHLPAAPKTKRAPS-AFLTVQEGCDKFCAFCV-VPFTRGAEVSRPVLQIIN 185

Query: 133 AALAYIQEKSQIWEVIFTGGD------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
            A   ++    + ++   G +       +      L +++K L  I+ ++ +RF +  P 
Sbjct: 186 EARDLVER--GVRDITLLGQNVNAYHGAMKSGDANLPQLIKELSKIEELKRIRFTTSHPN 243

Query: 187 VDPQRINPELIQC 199
                +  ELI  
Sbjct: 244 D----MTQELIDA 252


>gi|329848315|ref|ZP_08263343.1| radical SAM superfamily protein [Asticcacaulis biprosthecum C19]
 gi|328843378|gb|EGF92947.1| radical SAM superfamily protein [Asticcacaulis biprosthecum C19]
          Length = 405

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 43/233 (18%), Positives = 78/233 (33%), Gaps = 36/233 (15%)

Query: 104 VCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYI------QEKSQIWEVIFTG-GDPL 155
            C + C FC    + +             + A   +      +E  Q+  ++F G G+PL
Sbjct: 131 GCTLNCTFCHTGTQKLVRNLTAAEIVAQVQVARDDLGEWPSPKEDRQLSNIVFMGMGEPL 190

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
                 L  V   +  I   + +    R   V    + PEL          + I++HA +
Sbjct: 191 Y----NLDNVADAIDIISDNEGIALSRRRITVSTSGVVPELEALGNRTAAMLAISLHATN 246

Query: 216 P---YEFSEEAIAAISRLANAGI---ILLSQS-------VLLKGINDDPEILANLMRTFV 262
                E              AGI     LS +       V+LKG+ND P     L++   
Sbjct: 247 DTLRDEIVPLNKKYNIEALMAGIRAYPGLSNARRVTFEYVMLKGVNDSPAEARALIKLLK 306

Query: 263 ----ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
               ++ + P    +P      + ++ +     +  A++  K +G   P    
Sbjct: 307 GIPAKINLIP---FNP---WPGTDYQCSDWTAIETFAAILNK-AGYASPIRTP 352


>gi|170290638|ref|YP_001737454.1| radical SAM domain-containing protein [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170174718|gb|ACB07771.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 326

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 45/240 (18%), Positives = 83/240 (34%), Gaps = 46/240 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P R+ L L + C   C  C+       ++   LS++D +  L  I     + +V FTGG+
Sbjct: 4   PLRVDLILTYRCNNDCIHCYSS---SPRETEELSTEDWKRVLK-IFHGLGVPQVTFTGGE 59

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
           P  L  + L  ++   + +  V  +       + +   ++ +L + L EAG         
Sbjct: 60  P-TLR-EDLVDLVSEAQKLGMVSGI-------VTNGTLLSDDLSRRLVEAGLDYAQITLE 110

Query: 212 ------HANHPYEFSEE------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
                 H       +         +  I  + + G+ +   S LLK    +   + + +R
Sbjct: 111 SKDPEVH----DSITGVRGSWERTVRGIKNMVSTGVYVSVNSTLLKM---NSPTILDTIR 163

Query: 260 TFVELRIKPYYLHHPDLA---AGTSHFRLTIEEGQKIVASLKEKI-------SGLCQPFY 309
              EL +  Y L    +      T     + EE   I+   KE         +      Y
Sbjct: 164 FVAELGVHGYSL--NRVIYSGRATLDMEPSFEEMINIITEAKELAIELDLDFTWYGVTRY 221


>gi|73667402|ref|YP_303418.1| tRNA 2-methylthioadenosine synthase [Ehrlichia canis str. Jake]
 gi|72394543|gb|AAZ68820.1| tRNA 2-methylthioadenosine synthase [Ehrlichia canis str. Jake]
          Length = 411

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 23/118 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R L+++ + C   C FC   +  G  +       + E  +  +++   +   EV+FTG
Sbjct: 126 KSRALIEIQNGCNHECTFCVITKARGDNRSL-----NIEDIITKVRDCVNNGYNEVVFTG 180

Query: 152 GDPLILSHKRLQKVLKT---------LRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
            D   +S   L    +          L  +  ++ LR  S + + +   I  +L+  +
Sbjct: 181 VD---ISDFGLDIYGQRVLGTMVKRVLSAVPQLRRLRL-SSIDVAE---IEDDLVDII 231


>gi|327541062|gb|EGF27613.1| molybdenum cofactor biosynthesis protein A [Rhodopirellula baltica
           WH47]
          Length = 359

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 3/88 (3%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R  D + + +   C + C +C          +  VL+ ++ E     + ++  + ++  T
Sbjct: 36  RRHDSLRISITDRCNIRCFYCMPEHDADFLPRSGVLTFEEIERLAGLLVKRCGVRDIRIT 95

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           GG+PL+        +++ L  I  ++ L
Sbjct: 96  GGEPLVRRDCV--DLIQMLARIDGLEDL 121


>gi|294788304|ref|ZP_06753547.1| MoaA/NifB/PqqE family protein [Simonsiella muelleri ATCC 29453]
 gi|294483735|gb|EFG31419.1| MoaA/NifB/PqqE family protein [Simonsiella muelleri ATCC 29453]
          Length = 477

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 32/171 (18%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPLI 156
           ++++   C + C  CF     G+ +      +  E  L  I       +V+  +GG+P I
Sbjct: 102 IVEINRACNLNCPVCFAS--SGTHQTEHYPIEIVEKMLDAIVANEGEPDVVQLSGGEPTI 159

Query: 157 LSHKRLQKVLKTLRY--IKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKP-VYI 209
               +   +L   R   IKH+ I    +R             + E ++ L ++G   + I
Sbjct: 160 HP--QFFDILAAARKRPIKHLMINTNGVRIAQ----------DFEFVEKLAQSGLHGLEI 207

Query: 210 AIHANHP-YEFSEEAIAA-ISRLANAGIILLSQ----SVLL----KGINDD 250
            +  +    E ++    A +SR+    +  L++    + L+    KG+ND 
Sbjct: 208 YLQFDSLNNEVTQTLRGADLSRIRKQALDNLNRVGLSTTLVVTVAKGVNDH 258


>gi|170761673|ref|YP_001788384.1| radical SAM domain-containing protein [Clostridium botulinum A3
           str. Loch Maree]
 gi|169408662|gb|ACA57073.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch
           Maree]
          Length = 455

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF  E     K  ++S +  + A+ ++ EKS      EV   GG+PL
Sbjct: 99  LNIAHDCNLRCKYCFADEGEYKGKRELMSPRVGKKAIDFVIEKSGPRKNIEVDLFGGEPL 158

Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
           +     ++++++  +  +  H +I+RF
Sbjct: 159 MA-FSTIKEIVEYAKEQEEKHNKIIRF 184


>gi|87310727|ref|ZP_01092854.1| hypothetical protein DSM3645_06861 [Blastopirellula marina DSM
           3645]
 gi|87286484|gb|EAQ78391.1| hypothetical protein DSM3645_06861 [Blastopirellula marina DSM
           3645]
          Length = 432

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 20/173 (11%)

Query: 55  PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR--ILLKLLHVCPVYCRFC 112
           P     +P   E+     E  D +G      +   +  + DR    +K+   C + C FC
Sbjct: 90  PAELAVLPNVVEVVENKREIPDLLGRFGVIDVPTGLSTFGDRHRAFVKVQDGCLLRCTFC 149

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLI--------LSHKR 161
                    +    SS++  A +A + +     E++ TG   G   +            R
Sbjct: 150 IIP--TVRPEMYSRSSEEIIAEVARLADN-GFREIVLTGIHLGHYGVDQNRGKSKAEWMR 206

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L  ++++L  +     +R  S +   +   +  ELI+ + E    V   +H +
Sbjct: 207 LAHLVRSLARLDGDFRIRM-SSIEATE---VTRELIEVMGEFPDRVCPHLHIS 255


>gi|114565072|ref|YP_752586.1| molybdenum cofactor biosynthesis protein A [Shewanella
           frigidimarina NCIMB 400]
 gi|114336365|gb|ABI73747.1| molybdenum cofactor biosynthesis protein A [Shewanella
           frigidimarina NCIMB 400]
          Length = 328

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 12/100 (12%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE---KSQIW 145
            R  D + L +   C   C +C       S+  T L          L++I +   +  + 
Sbjct: 9   QRKVDYLRLSVTDRCDFRCVYCM------SEDPTFLPKSHVLSLEELSWIAQAFTELGVK 62

Query: 146 EVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV 184
           ++  TGG+PL+ S   +L K+L+ L  ++ + +    SR+
Sbjct: 63  KIRLTGGEPLVRSDCDKLVKLLRKLPQLEELSMTTNGSRL 102


>gi|312898217|ref|ZP_07757608.1| hypothetical protein HMPREF9429_00887 [Megasphaera micronuciformis
           F0359]
 gi|310620714|gb|EFQ04283.1| hypothetical protein HMPREF9429_00887 [Megasphaera micronuciformis
           F0359]
          Length = 322

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 17/135 (12%)

Query: 90  VHRYPDR-----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
           +H Y  R     + + + + C   C FC  +     +     S+     ++  +   +  
Sbjct: 15  IHPYKTREGGATVTVFVPYNCLNNCPFCINKAEY--ENPEGFSADKICESIRRMDAITPY 72

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            + +FTGG+P       L  + + L  I     +  ++ +P+ + Q    + I    E  
Sbjct: 73  CDFVFTGGEPF----ADLNVLQQMLDEIPKTHKVYINTTLPVSEFQ--TEDDIVRFTEKN 126

Query: 205 KP----VYIAIHANH 215
           K     + ++ H  H
Sbjct: 127 KDKITCINVSRHMQH 141


>gi|269798274|ref|YP_003312174.1| biotin and thiamin synthesis associated [Veillonella parvula DSM
           2008]
 gi|269094903|gb|ACZ24894.1| biotin and thiamin synthesis associated [Veillonella parvula DSM
           2008]
          Length = 472

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 93  YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y DRI+L       + C   C +C         K   L+       +  ++       VI
Sbjct: 80  YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYI 172
            +G DPL      L+ +L++++ I
Sbjct: 140 ESGEDPLNNP---LEYILESIKTI 160


>gi|116754458|ref|YP_843576.1| radical SAM domain-containing protein [Methanosaeta thermophila PT]
 gi|116665909|gb|ABK14936.1| Radical SAM domain protein [Methanosaeta thermophila PT]
          Length = 377

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 39/198 (19%)

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
            L  +  R PD+I + +   CP  C+ C    +  + +   L  +D +  +         
Sbjct: 85  VLASLGRRTPDQITISVTEECPNRCKHC---ALPDTGEHLSLEPEDVQRIIDQ-ALDLGS 140

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLK 201
             +IF GG+P +   + L +++  +             R               L + L+
Sbjct: 141 TLIIFDGGEPCMY--RELPELVSYVDD-----------RAVTTMFTSGAGFTDGLAKQLR 187

Query: 202 EAGKPVYIAIHANHPYE-----------FSEEAIAAISRLANAG--IILLSQSVLLKGIN 248
           +AG    + +  + P E              +A+ AI    +AG  + L    V+L+   
Sbjct: 188 DAGLQ-AVNVSLDSPLEEEHDAIRGRKGVYRDAMNAIKHALSAGLLVDLY---VVLRH-- 241

Query: 249 DDPEILANLMRTFVELRI 266
           D+   L +      ++ +
Sbjct: 242 DNIMHLQSFHELARKMGV 259


>gi|313836301|gb|EFS74015.1| radical SAM domain protein [Propionibacterium acnes HL037PA2]
 gi|314928766|gb|EFS92597.1| radical SAM domain protein [Propionibacterium acnes HL044PA1]
 gi|314971198|gb|EFT15296.1| radical SAM domain protein [Propionibacterium acnes HL037PA3]
 gi|328906485|gb|EGG26260.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III
           oxidase [Propionibacterium sp. P08]
          Length = 426

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 33/204 (16%), Positives = 67/204 (32%), Gaps = 37/204 (18%)

Query: 93  YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            P  ++ ++   C + C+ C    +      Q       +  +   +Y +    +   I 
Sbjct: 45  KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYEKPYPML---IL 101

Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           TGGD        L  +++  +    HV +       P V P     + ++ +++AG  + 
Sbjct: 102 TGGDCFERPD--LVDLIEYGVSKGLHVSV------SPSVTP-LFTHDRVKAVQDAGVSMM 152

Query: 209 IA--------IH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDDPEIL 254
                      H        P  F    + A   L   G+     +V   K I++ P++L
Sbjct: 153 SMSLDGGSAATHDAFRGF--PGTFDR-TVEACHMLRAMGMKFQLNTVFTAKNIHEAPQML 209

Query: 255 ANLMRTFVELRIKPYYLHHPDLAA 278
            N     ++L    +Y        
Sbjct: 210 KNA----IDLGAFMFYTFMLVPTG 229


>gi|293373984|ref|ZP_06620325.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f]
 gi|292631060|gb|EFF49697.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f]
          Length = 436

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 68/227 (29%), Gaps = 71/227 (31%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G         ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--HHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G D      + L ++++ +  I  V+ +R H       P     +L + ++E        
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
                           +                L+ I+D+   +  LMR           
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
                         ++ E+  +++   + ++ G+  +   ++  PG 
Sbjct: 268 --------------VSKEDTYQLIEQFRREVPGIHLRTTLMVGHPGE 300


>gi|284161609|ref|YP_003400232.1| radical SAM protein [Archaeoglobus profundus DSM 5631]
 gi|284011606|gb|ADB57559.1| Radical SAM domain protein [Archaeoglobus profundus DSM 5631]
          Length = 337

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 21/107 (19%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGD 153
           +++L +  +C   C +C   E    +     + ++ +     I+E + +    +  TGG+
Sbjct: 30  KMVLFVTGICNNSCFYCPISEERRGKDVVFANEREVKRIEDAIEEANAMSAEGIAITGGE 89

Query: 154 PLILSHKRLQKVLKT------------------LRYIKHVQILRFHS 182
           PL L   R+ + LKT                  L  +KH+  +RFH 
Sbjct: 90  PL-LKLDRVVEFLKTFKDLHSHLYTAIPAKESVLSKLKHLDEIRFHP 135


>gi|242239858|ref|YP_002988039.1| molybdenum cofactor biosynthesis protein A [Dickeya dadantii
           Ech703]
 gi|242131915|gb|ACS86217.1| molybdenum cofactor biosynthesis protein A [Dickeya dadantii
           Ech703]
          Length = 340

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 24/181 (13%)

Query: 99  LKLLHVCPVYCRFCFRR-EMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           L +  VC   C +C        GS     LS  +         E     +V  TGG+P +
Sbjct: 29  LSITDVCNFRCTYCLPNGYQPNGSASSRFLSLDEIRRVSRAFAE-LGTEKVRLTGGEPSL 87

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
                  +++  +R          H+     +  R+  ++ +  +     + +++ +   
Sbjct: 88  RRDFV--EIIAAIRENPA-----IHTLAVTTNGYRLARDVARWREAGLTSLNVSVDSLDA 140

Query: 217 YEFSE--------EAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
            +F          + +  I    + G   +   +VL++ IND      +L      +R +
Sbjct: 141 RQFHAITGQDKFRQVMDGIDAAFDCGFSRVKVNTVLMRDINDS-----SLHTFLAWIRQR 195

Query: 268 P 268
           P
Sbjct: 196 P 196


>gi|327402650|ref|YP_004343488.1| 30S ribosomal protein S12P methylthiotransferase [Fluviicola
           taffensis DSM 16823]
 gi|327318158|gb|AEA42650.1| SSU ribosomal protein S12P methylthiotransferase [Fluviicola
           taffensis DSM 16823]
          Length = 437

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 14/110 (12%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVI 148
              K+   C   C FC     R + V +    +++S  + AA    Q   +I     ++ 
Sbjct: 143 AYFKIAEGCDRPCSFCAIPLMRGKHVSTPMDQLVASAKSLAA----QGVKEILLIAQDLT 198

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           + G D  I   + L ++L  L  ++ ++ +R H   P   P  +   +++
Sbjct: 199 YYGLD--IYKKRNLAELLDQLAAVEGIEWIRLHYAFPAGFPMDVLDAMVK 246


>gi|299537543|ref|ZP_07050837.1| hypothetical protein BFZC1_16040 [Lysinibacillus fusiformis ZC1]
 gi|298727104|gb|EFI67685.1| hypothetical protein BFZC1_16040 [Lysinibacillus fusiformis ZC1]
          Length = 370

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                +C + C  C     + ++    L     E  L  + E   +  +  TGG+P ++S
Sbjct: 33  FTTTTLCNMRCAHCAVGYTLQNKDPEALP---IELILKRLDEIPHLKTLSITGGEP-MMS 88

Query: 159 HKRLQKVLKTLRYIKHVQILR 179
            K +Q  +  L    H + +R
Sbjct: 89  KKSVQNYVLPLLKYAHERGVR 109


>gi|160939106|ref|ZP_02086457.1| hypothetical protein CLOBOL_04000 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438069|gb|EDP15829.1| hypothetical protein CLOBOL_04000 [Clostridium bolteae ATCC
           BAA-613]
          Length = 459

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 10/109 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKG---TVLSSKDTEAALAYIQEKSQI-WEVIFTGG 152
             LK+   C   C +C    + G  +      L  +  + A A ++E   +  E    G 
Sbjct: 160 AFLKIAEGCDKRCTYCIIPYLRGPYRSVPIEQLVKEARQLAEAGVKELILVAQETTLYGR 219

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
           D  +   K L ++L+ L  I  +  +R         P+ I  ELI+ ++
Sbjct: 220 D--LYGEKCLPRLLRELAKIPGIYWIRIQ----YCYPEEITDELIETIR 262


>gi|124027074|ref|YP_001012394.1| Fe-S oxidoreductase [Hyperthermus butylicus DSM 5456]
 gi|123977768|gb|ABM80049.1| Fe-S oxidoreductase [Hyperthermus butylicus DSM 5456]
          Length = 264

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 3/68 (4%)

Query: 104 VCPVYCRFCFRREM--VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
            C + CRFC+       G  +G +LS  +    L  +  ++++ +V  +GG+P  +  + 
Sbjct: 50  GCNLRCRFCWAWRFTWTGYGRGVLLSPDEAAERLMRLARRTRVRQVRLSGGEP-TVGWEH 108

Query: 162 LQKVLKTL 169
           L +V++ +
Sbjct: 109 LLEVMEAV 116


>gi|325660993|ref|ZP_08149620.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 4_1_37FAA]
 gi|325472500|gb|EGC75711.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 4_1_37FAA]
          Length = 440

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 18/117 (15%)

Query: 97  ILLKLLHVCPVYCRFC--------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
             LK+   C  +C +C        FR   V  ++    + +  E  +  +   +Q  E  
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFRS--VPMEQLVHEAQELAEQGVKELILVAQ--ETT 201

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
             G D  +   K L K+LK L  I  ++ +R    V    P+ I  ELIQ +KE  K
Sbjct: 202 LYGKD--LYGEKSLHKLLKELCKIAGIRWIR----VLYCYPEEITDELIQVMKEESK 252


>gi|311993060|ref|YP_004009926.1| anaerobic NTP reductase, small subunit [Enterobacteria phage CC31]
 gi|284177898|gb|ADB81564.1| anaerobic NTP reductase, small subunit [Enterobacteria phage CC31]
          Length = 161

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 6/82 (7%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R++L +   C   C  C+ +     + GT  + +  E     + +   I  +  TGGDPL
Sbjct: 18  RVVLFVTG-CLHKCEGCYNKSTWNPRNGTEFTGETIEEIRELLSKD-YIQGITLTGGDPL 75

Query: 156 ILSHKR--LQKVLKTLR-YIKH 174
                R  ++ +LK L     H
Sbjct: 76  Y-PDNRETIEALLKCLHNSHPH 96


>gi|257065789|ref|YP_003152045.1| thiamine biosynthesis protein ThiH [Anaerococcus prevotii DSM
           20548]
 gi|256797669|gb|ACV28324.1| biotin and thiamin synthesis associated [Anaerococcus prevotii DSM
           20548]
          Length = 472

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
              E  +L   +E+ +     +  K + H+ Y +RI+L       + C   C +C     
Sbjct: 51  SHREAFVLLSCKEEDLNAEIFNLAKELKHKFYANRIVLFAPLYLSNYCVNGCSYCPYHGQ 110

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
             +     LS ++    +  +Q+       +  G DP+    + + + + T+  IKH
Sbjct: 111 NRTIPRRKLSQEEIREQVIALQDLGHKRLALEAGEDPVNNPLEYILESIDTIYNIKH 167


>gi|254511606|ref|ZP_05123673.1| radical SAM domain protein [Rhodobacteraceae bacterium KLH11]
 gi|221535317|gb|EEE38305.1| radical SAM domain protein [Rhodobacteraceae bacterium KLH11]
          Length = 317

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 60/158 (37%), Gaps = 20/158 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGG 152
           P+ +      +C + C  C+      +     +++ +    L  IQE++  I E+ FTGG
Sbjct: 34  PETLWFNTGTLCNIECVNCYIASSPTNDALVYITTDEVRDYLDQIQERNWPIREIGFTGG 93

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVYI 209
           +P  ++ + +      L     V IL        + P    ++   L++  ++    + +
Sbjct: 94  EPF-MNPQMIDMTRAALERGYEVLIL-----TNAMLPMMRRKMREGLLELQRDYADKLTL 147

Query: 210 AIHANHPY-EFSEE---------AIAAISRLANAGIIL 237
            I  +H   E  +E          +  +  L + G  +
Sbjct: 148 RISVDHYRPELHDEERGKGSFAKTLTGMEWLRDNGFRM 185


>gi|94311377|ref|YP_584587.1| molybdenum cofactor biosynthesis protein A [Cupriavidus
           metallidurans CH34]
 gi|93355229|gb|ABF09318.1| molybdopterin biosynthesis protein A [Cupriavidus metallidurans
           CH34]
          Length = 395

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 19/130 (14%)

Query: 51  NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           +  D   R  +P      + P      + D    PL  +         + +   C   C 
Sbjct: 31  DLRDHRYRSMVPSIPSHLVAPNGL---VADTRGRPLHDLR--------ISVTDRCNFRCV 79

Query: 111 FCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165
           +C  +E+            +LS ++ E     I     + ++  TGG+PL+   K ++++
Sbjct: 80  YCMPKEVFDKDYTFLPHSELLSFEEIERTAR-IFVSQGVEKIRLTGGEPLL--RKNIERL 136

Query: 166 LKTLRYIKHV 175
           ++ L  I+ V
Sbjct: 137 VEMLARIETV 146


>gi|282850512|ref|ZP_06259891.1| thiazole biosynthesis protein ThiH [Veillonella parvula ATCC 17745]
 gi|282580005|gb|EFB85409.1| thiazole biosynthesis protein ThiH [Veillonella parvula ATCC 17745]
          Length = 472

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 93  YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y DRI+L       + C   C +C         K   L+       +  ++       VI
Sbjct: 80  YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYI 172
            +G DPL      L+ +L++++ I
Sbjct: 140 ESGEDPLNNP---LEYILESIKTI 160


>gi|149914119|ref|ZP_01902650.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. AzwK-3b]
 gi|149811638|gb|EDM71471.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. AzwK-3b]
          Length = 446

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 20/103 (19%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIF---- 149
              L +   C  +C FC     V        +S+     L   +E     + E+      
Sbjct: 151 TAFLTVQEGCDKFCAFC-----VVPYTRGAEASRPAARILDEARELVDRGVREITLLGQN 205

Query: 150 ------TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                 TG D    S   L +++  L  I  ++ +RF +  P 
Sbjct: 206 VNAYHGTGPDG---SDWSLARLIWALDAIDGLERIRFTTSHPN 245


>gi|153005880|ref|YP_001380205.1| nitrogenase cofactor biosynthesis protein NifB [Anaeromyxobacter
           sp. Fw109-5]
 gi|152029453|gb|ABS27221.1| nitrogenase cofactor biosynthesis protein NifB [Anaeromyxobacter
           sp. Fw109-5]
          Length = 495

 Score = 38.5 bits (89), Expect = 1.6,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 66/191 (34%), Gaps = 38/191 (19%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H +  R+ + +   C V C +C R+         G     +         LA   E  +
Sbjct: 49  AHHHFARMHVAVAPACNVQCHYCNRKYDCANESRPGVVSERLRPEDAVRKVLAVAAELPE 108

Query: 144 IWEVIFTG-GDPLI---------------LSHKRLQKVLKTLRYIKHVQILRF-HSRVPI 186
           +  V   G GD L                    RL      L   +H + L    +R   
Sbjct: 109 LSVVGIAGPGDALANADATFATLEGVHRAAPDLRLCVSTNGLALPEHAERLAAAGARHVT 168

Query: 187 V-----DP---QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           V     DP   +RI P +++  ++   P             S + +  I+ LA  G+++ 
Sbjct: 169 VTVNMIDPAVGERIYPWVLRGGRKVRGPEA-------SRILSAQQLEGIAALAARGVLVK 221

Query: 239 SQSVLLKGIND 249
             SV++ G+ND
Sbjct: 222 VNSVVIPGVND 232


>gi|317128167|ref|YP_004094449.1| coproporphyrinogen dehydrogenase [Bacillus cellulosilyticus DSM
           2522]
 gi|315473115|gb|ADU29718.1| Coproporphyrinogen dehydrogenase [Bacillus cellulosilyticus DSM
           2522]
          Length = 499

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 20/157 (12%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAY----- 137
           + +  + H   +  +   +  CP  C +C        +  G   S ++    L Y     
Sbjct: 163 AVVPDLDHIKNEVSIYIGIPFCPTMCAYCT---FPAYAINGKNGSVEEFLTGLHYEMEVT 219

Query: 138 ----IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
                +   ++  + + GG P  ++ + +  + + +  +  +  +R  + V    P  I+
Sbjct: 220 GTWLKERNIKVTTIYYGGGTPTSITAREMDALYEKMYQVFPMADVRELT-VEAGRPDTIS 278

Query: 194 PELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR 229
           PE I+ LK+     + +      P  F+ E + AI R
Sbjct: 279 PEKIEVLKKWNVDRISVN-----PQSFTNETLKAIGR 310


>gi|229816073|ref|ZP_04446394.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM
           13280]
 gi|229808387|gb|EEP44168.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM
           13280]
          Length = 441

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI---FTGGDPL 155
           L + HVC + C +CF  +     +  ++  K   AA+ Y+   S   +V+   F GG+P+
Sbjct: 92  LHVAHVCNLGCDYCFAGKGNYGTQSLLMKEKVAYAAVDYLVHNSSKNDVLTIVFFGGEPM 151

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           +  ++ L           H +  RF +     +   +N   I+  KE G  + +++
Sbjct: 152 L--NEPLIWKTVDYAESAHPKR-RF-TYSITTNGTLLNDRAIEAFKEHGFSILVSL 203


>gi|115374433|ref|ZP_01461715.1| radical SAM:Molybdenum cofactor synthesis C-terminal [Stigmatella
           aurantiaca DW4/3-1]
 gi|115368525|gb|EAU67478.1| radical SAM:Molybdenum cofactor synthesis C-terminal [Stigmatella
           aurantiaca DW4/3-1]
          Length = 362

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 5/84 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C   C +C         K  +LS+ + E  ++       I  V  TGG+PLI  
Sbjct: 32  LSVTDRCNFRCTYC--SPASWGGKKDLLSALEFERIVSVFASM-GIQRVRLTGGEPLIRP 88

Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182
              + ++ + L  +  V+ +   +
Sbjct: 89  D--ILEIAQRLSALPGVERVAITT 110


>gi|32472889|ref|NP_865883.1| molybdopterin cofactor synthesis protein A [Rhodopirellula baltica
           SH 1]
 gi|81661860|sp|Q7UT69|MOAA_RHOBA RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|32444126|emb|CAD73568.1| molybdopterin cofactor synthesis protein A [Rhodopirellula baltica
           SH 1]
          Length = 359

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 3/88 (3%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           R  D + + +   C + C +C          +  VL+ ++ E     + ++  + ++  T
Sbjct: 36  RRHDSLRISITDRCNIRCFYCMPEHDAEFLPRSGVLTFEEIERLAGLLVKRCGVRDIRIT 95

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           GG+PL+        +++ L  I  ++ L
Sbjct: 96  GGEPLVRRDCV--DLIRMLARIDGLEDL 121


>gi|291165575|gb|EFE27624.1| radical SAM domain protein [Filifactor alocis ATCC 35896]
          Length = 373

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 19/126 (15%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIF 149
           +     +      CP  C FC +R++ G  +   +S      E  L+  +E +      F
Sbjct: 8   KKITIPIFVPHKGCPNDCVFCNQRKITGMTEEMTVSRAKATIEEFLSEKREDAFYEIAFF 67

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVDPQRINPELIQCLKE 202
            G    I   +R++     L  + H       V+ +R  +R     P  I+  +++ L++
Sbjct: 68  GGSFTAISDARRVE-----LLQLAHQYILSGEVKSVRISTR-----PDAIDEMILEELQQ 117

Query: 203 AGKPVY 208
            G  V 
Sbjct: 118 YGVQVI 123


>gi|257063155|ref|YP_003142827.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
 gi|256790808|gb|ACV21478.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476]
          Length = 293

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 6/88 (6%)

Query: 94  PDRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTG 151
           P   LL++   C    C+FC    M    +  +   +D EA LA ++        +    
Sbjct: 14  PTWPLLEVTQGCTHNKCKFCT---MYKGVRFDLRPLEDIEADLAELRSTVPHARTIQLLS 70

Query: 152 GDPLILSHKRLQKVLKTL-RYIKHVQIL 178
            +PL L + R + +L+ +  Y+  ++ +
Sbjct: 71  ANPLALPYSRFKPILEKINEYLPDIEFV 98


>gi|239825986|ref|YP_002948610.1| YfkB-like domain protein [Geobacillus sp. WCH70]
 gi|239806279|gb|ACS23344.1| YfkB-like domain protein [Geobacillus sp. WCH70]
          Length = 374

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 16/119 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                +C + C  C     + ++    L     +  +  ++E   +  +  TGG+P +LS
Sbjct: 35  FTTTTLCNMRCEHCAVGYTLQTKDPEALP---LDLLIQRLEEIPHLRSLSITGGEP-MLS 90

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
            K +   +  L    H + +R           ++N  L   L    K  P    +H +H
Sbjct: 91  LKSVNNYVVPLLKYAHERGVR----------TQLNSNLTLELDRYEKIIPYLDVLHISH 139


>gi|149923413|ref|ZP_01911818.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Plesiocystis pacifica SIR-1]
 gi|149815720|gb|EDM75246.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Plesiocystis pacifica SIR-1]
          Length = 298

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 38/166 (22%)

Query: 97  ILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----------- 144
           +L+++   C    C +C         +      KD     A I E   +           
Sbjct: 17  LLIQVTLGCSHNRCVYC------DMYRDKRFRPKDWGQVEADIIEAGAMGRRPGRRGFRS 70

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFH----SRVPIVDPQRINPELIQC 199
            +V    GD LIL  +RL ++L  +R  +  V+  R      +R       R + E +  
Sbjct: 71  TKVFLCDGDALILPTRRLLQILAAIREHLPWVE--RVGSYGDTRSV----GRKSVEELTA 124

Query: 200 LKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGII 236
           L+EAG  +          E            E I    +L  AG+ 
Sbjct: 125 LREAGLGIVYHGMETGDAEVLERIDKGGTRPELIETADKLRAAGVQ 170


>gi|49184749|ref|YP_028001.1| coenzyme PQQ synthesis protein [Bacillus anthracis str. Sterne]
 gi|49178676|gb|AAT54052.1| coenzyme PQQ synthesis protein, putative [Bacillus anthracis str.
           Sterne]
          Length = 378

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 10  PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 65

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 66  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 116

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H        +  + AI  L    I +   +V+     D  E +A L+  
Sbjct: 117 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 176

Query: 261 F 261
            
Sbjct: 177 L 177


>gi|30261914|ref|NP_844291.1| coenzyme PQQ synthesis protein, putative [Bacillus anthracis str.
           Ames]
 gi|47527167|ref|YP_018516.1| coenzyme PQQ synthesis protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|165869387|ref|ZP_02214046.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0488]
 gi|167633400|ref|ZP_02391725.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0442]
 gi|167638757|ref|ZP_02397032.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0193]
 gi|170707334|ref|ZP_02897789.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0389]
 gi|177650509|ref|ZP_02933476.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0174]
 gi|190566409|ref|ZP_03019327.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227815307|ref|YP_002815316.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           CDC 684]
 gi|229600588|ref|YP_002866287.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0248]
 gi|254684473|ref|ZP_05148333.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           CNEVA-9066]
 gi|254724000|ref|ZP_05185786.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A1055]
 gi|254734776|ref|ZP_05192488.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           Western North America USA6153]
 gi|254741178|ref|ZP_05198866.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           Kruger B]
 gi|254755429|ref|ZP_05207463.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           Vollum]
 gi|254759966|ref|ZP_05211990.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           Australia 94]
 gi|30256540|gb|AAP25777.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           Ames]
 gi|47502315|gb|AAT30991.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           'Ames Ancestor']
 gi|164714827|gb|EDR20345.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0488]
 gi|167513221|gb|EDR88592.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0193]
 gi|167531438|gb|EDR94116.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0442]
 gi|170127833|gb|EDS96705.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0389]
 gi|172083653|gb|EDT68713.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0174]
 gi|190562544|gb|EDV16511.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis
           Tsiankovskii-I]
 gi|227007826|gb|ACP17569.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           CDC 684]
 gi|229264996|gb|ACQ46633.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0248]
          Length = 377

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 9   PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 64

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 65  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 115

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H        +  + AI  L    I +   +V+     D  E +A L+  
Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 175

Query: 261 F 261
            
Sbjct: 176 L 176


>gi|77408017|ref|ZP_00784766.1| radical SAM domain protein protein [Streptococcus agalactiae COH1]
 gi|77173379|gb|EAO76499.1| radical SAM domain protein protein [Streptococcus agalactiae COH1]
          Length = 315

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +++ L   C   C  C    +  S     L+ ++ EA + Y +    +  V  TGG+ L+
Sbjct: 4   LVINLSQKCNAKCDHCCFSCLPNSVN--CLTDEEIEAVVRYAETHEDVELVSLTGGEALL 61

Query: 157 LSHKRLQKVLK 167
              K L+ + +
Sbjct: 62  RKSKVLETIHR 72


>gi|222100278|ref|YP_002534846.1| Biotin synthetase [Thermotoga neapolitana DSM 4359]
 gi|221572668|gb|ACM23480.1| Biotin synthetase [Thermotoga neapolitana DSM 4359]
          Length = 307

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R +++  +VC   C +C  R    + K   ++ ++         +      V+ +G DP 
Sbjct: 13  RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIIERAKLAVQFGAKTIVLQSGEDPY 72

Query: 156 ILSHKRLQKVLKTLRYI 172
            +    +  +++ ++ +
Sbjct: 73  YMPD-VISDIVREIKKM 88


>gi|188588968|ref|YP_001921205.1| thiamine biosynthesis protein ThiH [Clostridium botulinum E3 str.
           Alaska E43]
 gi|188499249|gb|ACD52385.1| putative thiazole biosynthesis protein [Clostridium botulinum E3
           str. Alaska E43]
          Length = 472

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREM 117
              E  IL E   D      H   K I  + Y +RI+    L L + C   C +C     
Sbjct: 49  SHREAAILLECDLDEEIQKIHDLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCTYCPYHHQ 108

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
                   L+ ++ +  +  +Q+       + TG DP+    + + + +KT+  IKH
Sbjct: 109 NKHISRKKLTQEEIKREVIALQDMGHKRLALETGEDPINNPIEYVLESIKTIYSIKH 165


>gi|170766823|ref|ZP_02901276.1| putative coproporphyrinogen III oxidase [Escherichia albertii
           TW07627]
 gi|170124261|gb|EDS93192.1| putative coproporphyrinogen III oxidase [Escherichia albertii
           TW07627]
          Length = 419

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%)

Query: 94  PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
             R++   +  C  +C FC F +           +    ++ E  A + + + + I  V 
Sbjct: 30  RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSAPIHAVY 89

Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
           F GG P  LS + L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 90  FGGGTPSALSARDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138


>gi|145588575|ref|YP_001155172.1| molybdenum cofactor biosynthesis protein A [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145046981|gb|ABP33608.1| GTP cyclohydrolase subunit MoaA [Polynucleobacter necessarius
           subsp. asymbioticus QLW-P1DMWA-1]
          Length = 371

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 12/88 (13%)

Query: 94  PDRIL----LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144
             R+L    + +   C   C +C     F +         +LS ++    L  I     +
Sbjct: 35  RGRVLRDLRISVTDRCNFRCTYCMPKEVFDQNYPYLAHQELLSFEEITR-LTSIFSSLGV 93

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYI 172
            ++  TGG+PL+   K L+ +++ L  I
Sbjct: 94  EKIRLTGGEPLL--RKNLEILIEMLAKI 119


>gi|154174577|ref|YP_001408011.1| aspartate kinase [Campylobacter curvus 525.92]
 gi|112803284|gb|EAU00628.1| asparate kinase, monofunctional class [Campylobacter curvus 525.92]
          Length = 399

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 23/166 (13%)

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           IFT  D +  +  R++K  K L  + + ++L   S    V   R     ++  K+    +
Sbjct: 170 IFTDVDGVYTTDPRIEKRAKKLEKVSYDEMLELASAGAKVLQNR----SVELAKKLNVKL 225

Query: 208 YIAIHANHPYEFSEEAIAA-ISRLANAGIIL-LSQS-VLLKGINDDPEILANLMRTFVEL 264
                 NH  E +       +  +  +GI L  +Q+ V L+G+ D P I A +     + 
Sbjct: 226 VTRSSFNH-NEGTLIVKEEDMEAVLVSGIALDKNQARVTLRGVVDKPGIAAEIFTALAKK 284

Query: 265 RIKPYYLHHPDL-AAGTSH-------FRLTIEEGQKIVASLKEKIS 302
            I      + D+      H       F +   E  ++     +K+S
Sbjct: 285 NI------NVDMIIQNVGHDGTTNLGFTVPQNE-LELAKETMQKLS 323


>gi|332993820|gb|AEF03875.1| molybdenum cofactor biosynthesis protein A [Alteromonas sp. SN2]
          Length = 322

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 21/178 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C   C++C      G      LS  +    L+         +V  TGG+P  L 
Sbjct: 15  LSVTEACNFRCQYCLPDGYQGPSSEHFLSLGEINTLLSAFSG-LGTSKVRLTGGEP-TLR 72

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
              L  +L        ++ +   +        R+        +     V ++I +  P +
Sbjct: 73  RDFLD-ILSATANTPGIKRVAMTTHG-----GRMAEHAAAWKQAGLHQVNVSIDSLDPRQ 126

Query: 219 FSE--------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           F+         + +A +     AG+ +   SVLL   +D     A L R    L+  P
Sbjct: 127 FAAITGQDKLKQVLAGLDAAVEAGLDVKVNSVLLNDFSD-----ARLNRFLDWLKTMP 179


>gi|317179320|dbj|BAJ57108.1| hypothetical protein HPF30_1011 [Helicobacter pylori F30]
          Length = 418

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|317012127|gb|ADU82735.1| hypothetical protein HPLT_01465 [Helicobacter pylori Lithuania75]
          Length = 418

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|308061638|gb|ADO03526.1| hypothetical protein HPCU_01755 [Helicobacter pylori Cuz20]
          Length = 418

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|298736768|ref|YP_003729298.1| hypothetical protein HPB8_1277 [Helicobacter pylori B8]
 gi|298355962|emb|CBI66834.1| conserved hypothetical protein [Helicobacter pylori B8]
          Length = 418

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|254778988|ref|YP_003057093.1| putative MiaB-like tRNA modifying enzyme [Helicobacter pylori B38]
 gi|254000899|emb|CAX28835.1| Putative MiaB-like tRNA modifying enzyme [Helicobacter pylori B38]
          Length = 418

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|224026389|ref|ZP_03644755.1| hypothetical protein BACCOPRO_03145 [Bacteroides coprophilus DSM
           18228]
 gi|224019625|gb|EEF77623.1| hypothetical protein BACCOPRO_03145 [Bacteroides coprophilus DSM
           18228]
          Length = 438

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 7/120 (5%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C      G  +   +     +A  A  +   +I       GD
Sbjct: 148 RTRYFLKVQDGCDYFCSYCTIPFARGRSRNGKIEDLVAQARQAAAEGGKEIVLTGVNIGD 207

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
               + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +        H 
Sbjct: 208 FGKTTGETFFDLVKALDQVEGIERFRISS----IEPNLLTDEIIEYVAHSR---AFMPHF 260


>gi|217031506|ref|ZP_03437011.1| hypothetical protein HPB128_21g64 [Helicobacter pylori B128]
 gi|216946706|gb|EEC25302.1| hypothetical protein HPB128_21g64 [Helicobacter pylori B128]
          Length = 398

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 113 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 167

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 168 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 201


>gi|208434231|ref|YP_002265897.1| hypothetical protein HPG27_264 [Helicobacter pylori G27]
 gi|208432160|gb|ACI27031.1| hypothetical protein HPG27_264 [Helicobacter pylori G27]
          Length = 418

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|108562712|ref|YP_627028.1| hypothetical protein HPAG1_0287 [Helicobacter pylori HPAG1]
 gi|107836485|gb|ABF84354.1| hypothetical protein HPAG1_0287 [Helicobacter pylori HPAG1]
          Length = 418

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|15644913|ref|NP_207083.1| hypothetical protein HP0285 [Helicobacter pylori 26695]
 gi|2501536|sp|P56130|Y285_HELPY RecName: Full=Putative methylthiotransferase HP_0285
 gi|2313381|gb|AAD07353.1| conserved hypothetical protein [Helicobacter pylori 26695]
          Length = 418

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|294792135|ref|ZP_06757283.1| putative ThiH protein [Veillonella sp. 6_1_27]
 gi|294457365|gb|EFG25727.1| putative ThiH protein [Veillonella sp. 6_1_27]
          Length = 482

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 93  YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y DRI+L       + C   C +C         K   L+       +  ++       VI
Sbjct: 90  YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 149

Query: 149 FTGGDPLILSHKRLQKVLKTLRYI 172
            +G DPL      L+ +L++++ I
Sbjct: 150 ESGEDPLNNP---LEYILESIKTI 170


>gi|225874256|ref|YP_002755715.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225792393|gb|ACO32483.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 374

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
           P  +  ++   CP+ CR C R E V       L+  ++   L  I      +   +I TG
Sbjct: 23  PMIVYWEMTQACPLACRHC-RAEAVTMPHPCELNYDESRDLLRQIAAFGDPKPH-LILTG 80

Query: 152 GDPL 155
           GDPL
Sbjct: 81  GDPL 84


>gi|255102210|ref|ZP_05331187.1| radical SAM-family protein [Clostridium difficile QCD-63q42]
          Length = 475

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 59/146 (40%), Gaps = 20/146 (13%)

Query: 92  RYP--DRI---LLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKS-- 142
           +Y   +R+   +L++   C ++C +C       +       +S +  +  + Y+   S  
Sbjct: 79  KYHCENRVEGIILQVTQNCNLHCDYCTYSGGYINRIHTNKRMSKETAKRGIDYLISHSRD 138

Query: 143 -QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQC 199
            Q   + F GG+PL L    ++  ++      ++  + L++       +   I  E+I+ 
Sbjct: 139 CQYVSIGFYGGEPL-LEFDLIKWCIE--YSKANIEGKNLKY---NLTTNATLITEEIIEL 192

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIA 225
            +E    V I I  + P E  ++   
Sbjct: 193 FEE--NNVSIMISLDGPAEIHDKNRK 216


>gi|149203904|ref|ZP_01880872.1| radical SAM domain protein [Roseovarius sp. TM1035]
 gi|149142346|gb|EDM30391.1| radical SAM domain protein [Roseovarius sp. TM1035]
          Length = 321

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 14/156 (8%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTG 151
           +P+ +      +C + CR C+      +     +S  +    L  ++ +   + E+ FTG
Sbjct: 37  HPETLWFNTGTLCNIECRNCYILSSPSNDALVYISESEVRDYLGQVRARGWPLREIAFTG 96

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           G+P  ++ + +      L     V IL    R  +    R    L+   K  G+ + + I
Sbjct: 97  GEPF-MNPEMIGMARAALEAGFEVLILTNAMRPMMRKTMR--AGLLDLGKTWGEKLTLRI 153

Query: 212 HANHPYE-FSEEAIAA---------ISRLANAGIIL 237
             +H  E   +E   A         +  L + GI +
Sbjct: 154 SVDHWSEALHDEERGAGAFAKTLEGMCWLRDNGIRM 189


>gi|148655095|ref|YP_001275300.1| radical SAM domain-containing protein [Roseiflexus sp. RS-1]
 gi|148567205|gb|ABQ89350.1| Radical SAM domain protein [Roseiflexus sp. RS-1]
          Length = 367

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 18/111 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----VIFTGGDP 154
            ++   C + CR C    M       +      E ++ ++++     +    +I TGGDP
Sbjct: 27  WEMTQACALACRHCRAEAMPHPHPLQL----SFEESVRFLRQIPDFGDPMPQLILTGGDP 82

Query: 155 LILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           L      L  ++   R +   V I       P   P  +   ++  LK  G
Sbjct: 83  LARPD--LLDLIDAARALGVPVSI------TPSATPN-LTRTMLAALKAHG 124


>gi|159042455|ref|YP_001541707.1| radical SAM domain-containing protein [Caldivirga maquilingensis
           IC-167]
 gi|157921290|gb|ABW02717.1| Radical SAM domain protein [Caldivirga maquilingensis IC-167]
          Length = 382

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 74/194 (38%), Gaps = 39/194 (20%)

Query: 93  YPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI- 148
           Y  R LL        CP+ CR C R   +       LS+ + +  +  + E  +   V+ 
Sbjct: 5   YSQRPLLVFWETTKACPLSCRHC-RANAILKPLPGELSTDEGKRLIEQLPEFGKPTPVLI 63

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--QCLKEAGKP 206
            TGGDPL+     + +++   + +           VP+     ++ +L+    + E  + 
Sbjct: 64  LTGGDPLMRED--IFELIDYAKSLN----------VPVAVSPTVSEKLLSDNVIDELRRV 111

Query: 207 VYIA---------IH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252
             ++          H      N  +E +   + AIS L  AG+ +   +  +K    +  
Sbjct: 112 SSVSVSLDGASPTTHEYIRNRNGVFELT---LKAISSLLKAGVKVQVNTTFMKL---NVH 165

Query: 253 ILANLMRTFVELRI 266
            L  +++   +L +
Sbjct: 166 ELPLIVKVLKDLGV 179


>gi|88856676|ref|ZP_01131332.1| MoaA-related protein [marine actinobacterium PHSC20C1]
 gi|88814137|gb|EAR24003.1| MoaA-related protein [marine actinobacterium PHSC20C1]
          Length = 336

 Score = 38.5 bits (89), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 8/97 (8%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              E  +      DP+   +   L G       R+ +     C + C +C  R    +++
Sbjct: 56  TAHEATVRHGRAPDPLAGIDPDQLPG------TRLWMYTNFDCNLACDYCCVRSSPQTER 109

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
             +   +  + A   ++    + E+I TGG+P +L  
Sbjct: 110 RALGVDRVAQLAAEAVEA--GVKELILTGGEPFLLPD 144


>gi|325300681|ref|YP_004260598.1| Radical SAM domain-containing protein [Bacteroides salanitronis DSM
           18170]
 gi|324320234|gb|ADY38125.1| Radical SAM domain protein [Bacteroides salanitronis DSM 18170]
          Length = 545

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 46/246 (18%), Positives = 74/246 (30%), Gaps = 46/246 (18%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L+    C   C FC      G +    L  +     ++ IQE   I  +         
Sbjct: 179 VQLETTRGCFNTCAFCVSG---GEKPVRTLPIETIRRRISLIQEH-YIRNIRVLDR-TFN 233

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
            + +  + +L   R       +RFH     V P  ++ EL + L    K     +H    
Sbjct: 234 YNTRHARALLDLFREFP---DIRFHLE---VHPALLSEELKEILAAMPKG---QLH---- 280

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276
                           AGI  L Q VL   ++     LA+ +     L   P    H DL
Sbjct: 281 --------------LEAGIQSLHQEVLT--VSRRAGDLADALSGLEFLCALPNLETHADL 324

Query: 277 AAGTSHFRL--------TIE--EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326
            AG   + L        T+      +I     + + G        +L   Y       + 
Sbjct: 325 IAGLPLYHLKEIFDDVRTLASYRAGEIQLESLKLLPGTEMRRRSPELSISYS--PFPPYE 382

Query: 327 IKKVGN 332
           + K   
Sbjct: 383 VLKTNE 388


>gi|323496777|ref|ZP_08101822.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326]
 gi|323318202|gb|EGA71168.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326]
          Length = 457

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 23/133 (17%)

Query: 54  DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD-------RILLKLLHVCP 106
           DP+ R   PQK+  +        PI       ++ +   Y         R L   +  C 
Sbjct: 18  DPL-RYAFPQKK--SAHAGGMASPIP--PDQKVEILSRLYDQQGQKSAKRCLYIHIPFCR 72

Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--------IWEVIFTGGDPLILS 158
           V C FC       +     L     EA +  I +K+            V   GG P  LS
Sbjct: 73  VRCTFC---NFFQNAASRKLVDDYFEALMIEIAQKAAQPWTQTGLFHAVYIGGGTPTDLS 129

Query: 159 HKRLQKVLKTLRY 171
            ++++++ K +R 
Sbjct: 130 AEQVERLGKAIRR 142


>gi|313125740|ref|YP_004036010.1| miab-like tRNA modifying enzyme [Halogeometricum borinquense DSM
           11551]
 gi|312292105|gb|ADQ66565.1| MiaB-like tRNA modifying enzyme [Halogeometricum borinquense DSM
           11551]
          Length = 417

 Score = 38.2 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 9/113 (7%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           +L +   C   C +C  +     +  +    ++ E A A +   +   E+  TG D  + 
Sbjct: 126 ILPIARGCMSNCSYCITK-FATGRVDSPPVEENVEKARALV--HAGAKEIRITGQDTGVY 182

Query: 158 ----SHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                 ++L ++L  +   I+    +R     P      I+ EL++      K
Sbjct: 183 GWDKGDRKLPELLDRICSEIEGDFRVRLGMANPGGI-HGIHEELVEVFDRHDK 234


>gi|329942551|ref|ZP_08291361.1| radical SAM superfamily protein [Chlamydophila psittaci Cal10]
 gi|332287182|ref|YP_004422083.1| radical SAM domain protein [Chlamydophila psittaci 6BC]
 gi|313847779|emb|CBY16769.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
 gi|325506991|gb|ADZ18629.1| radical SAM domain protein [Chlamydophila psittaci 6BC]
 gi|328815461|gb|EGF85449.1| radical SAM superfamily protein [Chlamydophila psittaci Cal10]
 gi|328914429|gb|AEB55262.1| conserved hypothetical protein TIGR00423 [Chlamydophila psittaci
           6BC]
          Length = 370

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 24/89 (26%), Gaps = 9/89 (10%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y     L   + C   C FC      G  KG   +       +  ++    I E    GG
Sbjct: 66  YSSTFYLYPTNFCEFNCTFCAFYAKPGDAKGWFHTPDQLIEKIRELEV--PITETHIVGG 123

Query: 153 DPLILSHKRLQKVLKTLRYI----KHVQI 177
                    L    +    I     H+ I
Sbjct: 124 ---CFPDCNLDYYTELFSKIKTNFPHIHI 149


>gi|293609283|ref|ZP_06691585.1| molybdopterin biosynthesis protein [Acinetobacter sp. SH024]
 gi|292827735|gb|EFF86098.1| molybdopterin biosynthesis protein [Acinetobacter sp. SH024]
          Length = 346

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 15/160 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C         K  +LS +      +++ ++  I  +  TGG+PL+  
Sbjct: 29  ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALIQFCSFMVQQ-GIESIRITGGEPLM-- 85

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
            + +   ++ L+ +K + + R      +        +  Q LK+AG   + I++ +  P 
Sbjct: 86  RQGIVHFVRDLQALKALGLKRIS----MTTNGHYLAKYAQQLKDAGLDDLNISLDSLDPI 141

Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
              E +    E  +  I    +AG+      VL+K  NDD
Sbjct: 142 QFKELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDD 181


>gi|295677633|ref|YP_003606157.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
           CCGE1002]
 gi|295437476|gb|ADG16646.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp.
           CCGE1002]
          Length = 461

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 46/142 (32%), Gaps = 30/142 (21%)

Query: 91  HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143
           H  P R+      + ++  C  YC +C     V         S+  +  L  I       
Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192

Query: 144 IWEVIFTGGD----------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQ 190
           + EV   G +           L L    +     +++ +  I  ++ +R+ +      P+
Sbjct: 193 VREVTLLGQNVNAYRGKFGGALTLGSTEIADFATLIEYVADIPGIERIRYTTSH----PK 248

Query: 191 RINPELIQCLKEAGKPVYIAIH 212
                LI    +  K +   +H
Sbjct: 249 EFTQRLIDTYAKVPK-LVSHLH 269


>gi|226314357|ref|YP_002774253.1| hypothetical protein BBR47_47720 [Brevibacillus brevis NBRC 100599]
 gi|226097307|dbj|BAH45749.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 367

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 8/74 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
           +   +VC  +C+FC  R   G +    +S ++    L Y++      I E    GG    
Sbjct: 67  INPTNVCEAHCKFCGFRRDEGDEGAYTMSMEEL---LHYVETRFHPGIREFHIVGG---H 120

Query: 157 LSHKRLQKVLKTLR 170
             HK  +  L TLR
Sbjct: 121 NQHKPFEYYLDTLR 134


>gi|205372586|ref|ZP_03225397.1| hypothetical protein Bcoam_03785 [Bacillus coahuilensis m4-4]
          Length = 375

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 4/83 (4%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L     E  L+ + E   +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLTPKDPNALP---IELLLSRLDEIQDLRSLSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILR 179
           LS K +++ +  L    H + +R
Sbjct: 90  LSKKSVEQYVLPLLQYSHSRGVR 112


>gi|77920081|ref|YP_357896.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
 gi|77546164|gb|ABA89726.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380]
          Length = 609

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 59/174 (33%), Gaps = 25/174 (14%)

Query: 77  PIGDNNHSPLKGIV-----HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
           P+ D    P   +       RYP  +L +L   CP  C FCF     GS K      +  
Sbjct: 166 PVTDLATLPSPFLTGLLPPERYPG-LLWELSRGCPFRCDFCFESR--GSDKVRRFPPERL 222

Query: 132 EAALAYIQEKSQIWEVIFTGGDP-LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190
            A L      + + ++     DP       + +++L+ +  +          R      +
Sbjct: 223 RAELESFAA-AGVRQLFV--LDPTFNYHQPQAKQMLRMMAELAPEIHYTIEVRA-----E 274

Query: 191 RINPELIQCLKEAGKPVYIAIHANHP-------YEFSEE-AIAAISRLANAGII 236
            I+ E+     +    + I + +  P        +F  E     I  L  AG+I
Sbjct: 275 FIDEEMAGLFADINCALQIGLQSADPAVLARVHRQFDAEDFTERILLLHEAGVI 328


>gi|229090888|ref|ZP_04222116.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-42]
 gi|228692497|gb|EEL46228.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-42]
          Length = 383

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 15  PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 71  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 121

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H        +  + AI  L    I +   +V+     D  E +A L+  
Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 181

Query: 261 F 261
            
Sbjct: 182 L 182


>gi|282882002|ref|ZP_06290643.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus lacrimalis
           315-B]
 gi|281298032|gb|EFA90487.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus lacrimalis
           315-B]
          Length = 467

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 16/125 (12%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW 145
           G    Y  +  + +++ C  +C FC     +         S++ +  +  I+        
Sbjct: 168 GANRLYSYKSYVNIMYGCNNFCTFC-----IVPYTRGREKSREADEIVDEIKSLIDKGSK 222

Query: 146 EVIFTGGDP-----LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
           E+   G +       + +     ++L  +  IK V+ +RF +      P+ I+ ELI   
Sbjct: 223 EITLLGQNVNSYGRGLENKTSFAQLLYRINDIKGVERIRFMTSH----PKDISDELIYAF 278

Query: 201 KEAGK 205
           ++   
Sbjct: 279 RDLDH 283


>gi|119872753|ref|YP_930760.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM
           4184]
 gi|119674161|gb|ABL88417.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184]
          Length = 298

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 38/181 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLI- 156
           +     C   C +C+    + +           E     +++  +   V  +   DP   
Sbjct: 27  VNPYTGCGHGCLYCYITSYISNAFNPRPKEDLVEKIRRDLEKIPRGSIVALSNSSDPYTP 86

Query: 157 ------LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                 L+ K LQ +L+        +++   ++ P+V         +         V + 
Sbjct: 87  PEATLGLTRKVLQILLERGY-----KVI-ITTKSPLVL------RDLDIFTRNRGRVVVQ 134

Query: 211 IHANHPYE-----FSEEA------IAAISRLANAGIILLSQSV----LLKGINDDPEILA 255
           I      E         A      + A+ RLA+ GI +   SV    L+  INDD + + 
Sbjct: 135 ITITTLREDLAAVLEPRAPRPAGRLEAVRRLASVGIPV---SVRLDPLIPYINDDIDNIE 191

Query: 256 N 256
            
Sbjct: 192 E 192


>gi|147678122|ref|YP_001212337.1| Fe-S-cluster redox protein [Pelotomaculum thermopropionicum SI]
 gi|205829798|sp|A5D1B6|RLMN_PELTS RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|146274219|dbj|BAF59968.1| predicted Fe-S-cluster redox enzyme [Pelotomaculum
           thermopropionicum SI]
          Length = 368

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 35/193 (18%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVI 148
           H Y + + +     C + CRFC     +G     +   +  +  L  I+     +I  V+
Sbjct: 114 HAYGNSVCVSTQAGCRMGCRFCASA--LGGLTRNLSPGEIYDQVLG-IRRDTGERISSVV 170

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQI---LRFHSRVPIVDPQRINPELIQCLK---- 201
                 L+ S + L     TL +IK+V     L    R   V        L+  ++    
Sbjct: 171 ------LMGSGEPLDNYDATLTFIKNVTAPYGLHIGCRHITVS----TCGLVPGIRRLAR 220

Query: 202 -EAGKPVYIAIH------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
            +    + +++H             N  Y  +E   A        G  +  +  LL G+N
Sbjct: 221 EKLALTLAVSLHAPNDRLRDILVPVNRKYPLTELMAACRDYAQETGRRVTFEYALLAGVN 280

Query: 249 DDPEILANLMRTF 261
           D  E    L+R  
Sbjct: 281 DRKEHAEELVRLL 293


>gi|18312397|ref|NP_559064.1| hypothetical protein PAE1082 [Pyrobaculum aerophilum str. IM2]
 gi|18159850|gb|AAL63246.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
          Length = 295

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 26/184 (14%), Positives = 59/184 (32%), Gaps = 22/184 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLIL 157
           L     C   C +C+    +             +     +++  +   V  +   DP   
Sbjct: 27  LNPYTGCGHGCLYCYITSYIPDAFNPRPKEDLLDKVRRDLEKIPKGAVVSLSNSSDPYTP 86

Query: 158 SHKRLQKVLKTLRYIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
              RL  + + +  +   +   +   ++ P+V         +   +     V + I    
Sbjct: 87  PEARLG-LTRRVLQMLLERGYKVLIVTKSPLVL------RDLDIFQRHRGRVAVQITITT 139

Query: 216 PYE-----FSEEA------IAAISRLANAGIILLSQS-VLLKGINDDPEILANLMRTFVE 263
             E         A      + A+ RL+ AG+ +  +   L+  +NDD + +  ++    E
Sbjct: 140 LREELASVLEPGAPRPAGRLDAVRRLSEAGVPVAVRLDPLIPLLNDDVDNIEEVVSKAAE 199

Query: 264 LRIK 267
              K
Sbjct: 200 AGAK 203


>gi|262279390|ref|ZP_06057175.1| molybdopterin biosynthesis protein [Acinetobacter calcoaceticus
           RUH2202]
 gi|262259741|gb|EEY78474.1| molybdopterin biosynthesis protein [Acinetobacter calcoaceticus
           RUH2202]
          Length = 346

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 21/163 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C         K  +L  +       ++ +   +  +  TGG+PL+  
Sbjct: 29  ISVTDRCNFKCVYCMPEHPEWLNKQDLLGFEALFQFCHFMVQH-GVESIRITGGEPLM-- 85

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYI----AI 211
            + +   ++ L+ +K + + R      +        +  + LK+AG     + +    AI
Sbjct: 86  RQGIVHFVRELQALKALGLKRIS----MTTNGHYLAKYARQLKDAGLDDLNISLDSLDAI 141

Query: 212 HANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
                 E +    E  +  I    + G+      VL+K  NDD
Sbjct: 142 QF---KELTKKKLEPVLEGIQAAKDVGLPFKINCVLMKNKNDD 181


>gi|315497432|ref|YP_004086236.1| molybdenum cofactor biosynthesis protein a [Asticcacaulis
           excentricus CB 48]
 gi|315415444|gb|ADU12085.1| molybdenum cofactor biosynthesis protein A [Asticcacaulis
           excentricus CB 48]
          Length = 337

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 87  KGIVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
             ++  Y  R   + + +   C + C +C         +  +LS ++ E  L+       
Sbjct: 5   PALIDAYHRRISYVRISVTDRCDLRCTYCMSERQTFLPRENLLSFEELER-LSLFLIDQG 63

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           +  +  TGG+PL+   + +   LK L    H   L
Sbjct: 64  VTRLRITGGEPLV--RRGILDFLKRLGAQVHEGRL 96


>gi|229824989|ref|ZP_04451058.1| hypothetical protein GCWU000182_00338 [Abiotrophia defectiva ATCC
           49176]
 gi|229790992|gb|EEP27106.1| hypothetical protein GCWU000182_00338 [Abiotrophia defectiva ATCC
           49176]
          Length = 435

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 8/67 (11%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEVIF 149
           DRI + L + C + C++C+ ++    +K  +L+  +    + Y+        + +  V F
Sbjct: 90  DRIEIMLTNTCNLSCKYCYAKDGTYGRKPRILNENEI---IKYLNALFPIKYNYVNTVFF 146

Query: 150 TGGDPLI 156
            GG+PL+
Sbjct: 147 FGGEPLL 153


>gi|229495505|ref|ZP_04389238.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Porphyromonas endodontalis ATCC 35406]
 gi|229317488|gb|EEN83388.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Porphyromonas endodontalis ATCC 35406]
          Length = 166

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 11/95 (11%)

Query: 87  KGIVH---RYPDRILLKLL-------HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           KG++H   RY + I              C  +C  C   E      G  LS +     + 
Sbjct: 10  KGMLHLLNRYKETISDGPGLRYAIYLAGCSHHCPGCHNPESHNPLGGIELSEEVLRGIID 69

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
            I     +  +  +GGDP     + L+ +++ L  
Sbjct: 70  EINSNPLLDGITLSGGDPFFYPEELLK-LVQRLSQ 103


>gi|209966936|ref|YP_002299851.1| FeMo cofactor biosynthesis protein nifB [Rhodospirillum centenum
           SW]
 gi|209960402|gb|ACJ01039.1| FeMo cofactor biosynthesis protein nifB [Rhodospirillum centenum
           SW]
          Length = 492

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 67/199 (33%), Gaps = 54/199 (27%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRR------EMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H Y  R+ + +   C + C +C R+         G     +   +     LA      Q
Sbjct: 60  AHHYFARMHVAVAPACNIQCNYCNRKFDCANESRPGVVSERLTPEEGARKVLAVAASVPQ 119

Query: 144 IWEVIFTG-GDP----------------------LILSHKRLQ--KVLKTL--RYIKHVQ 176
           +  +   G GD                       L LS   L   +++  +    I HV 
Sbjct: 120 LSVLGIAGPGDACYDWARTRATFALVARRLPDIRLCLSTNGLALPELVDEIVDMNIDHV- 178

Query: 177 ILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIAIHAN---HPYEFSEEAIAAISRL 230
            +  +    +VDP   +RI P +       G   +    A+   H  +        + RL
Sbjct: 179 TVTIN----MVDPEVGERIYPWIY-----HGHRRWTGRDASRLLHERQM-----EGLERL 224

Query: 231 ANAGIILLSQSVLLKGIND 249
              G+++   SV++ GIND
Sbjct: 225 TARGVLVKVNSVMIPGIND 243


>gi|187932645|ref|YP_001887172.1| heme biosynthesis [Clostridium botulinum B str. Eklund 17B]
 gi|187720798|gb|ACD22019.1| heme biosynthesis [Clostridium botulinum B str. Eklund 17B]
          Length = 451

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 6/102 (5%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
             +D   D  HS +      Y   + L ++H C + C++CF  E        V+S    +
Sbjct: 75  YSKDQYEDIAHSSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYHGHKGVMSLDVAK 132

Query: 133 AALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171
            A+ Y+ ++S      E+   GG+P  +    ++ ++K  R 
Sbjct: 133 KAIDYVVKRSGPRKNIEIDLFGGEP-TMIMDTIKDIIKYARD 173


>gi|170289332|ref|YP_001739570.1| radical SAM domain-containing protein [Thermotoga sp. RQ2]
 gi|170176835|gb|ACB09887.1| Radical SAM domain protein [Thermotoga sp. RQ2]
          Length = 348

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R +++  +VC   C +C  R    + K   ++ ++         +      V+ +G DP 
Sbjct: 54  RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIIERAKLAVQFGAKTIVLQSGEDPY 113

Query: 156 ILSHKRLQKVLKTLRYI 172
            +    +  +++ ++ +
Sbjct: 114 YMPD-VISDIVREIKKM 129


>gi|157804180|ref|YP_001492729.1| hypothetical protein A1E_05140 [Rickettsia canadensis str. McKiel]
 gi|229890632|sp|A8F011|MIAB_RICCK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157785443|gb|ABV73944.1| hypothetical protein A1E_05140 [Rickettsia canadensis str. McKiel]
          Length = 446

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 26/137 (18%)

Query: 76  DPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFC---------FRR--EMVGSQK 122
           D + +     L      YP      + +   C  +C FC         F R  E V  + 
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGASAFISVQEGCDKFCTFCVVPYTRGVEFSRNVEQVYREA 190

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
             V+S+   E  L  + +   +      G D  I S   L  +++ L  I +++ LR+ +
Sbjct: 191 LKVVSNGAREIML--LGQN--VNAYHGKGVDDKIFS---LADLIRYLAQIPNLERLRYTT 243

Query: 183 RVPIVDPQRINPELIQC 199
             PI     +  +LI+ 
Sbjct: 244 SHPID----MTDDLIKL 256


>gi|189346924|ref|YP_001943453.1| radical SAM enzyme, Cfr family [Chlorobium limicola DSM 245]
 gi|254807162|sp|B3ED49|RLMN_CHLL2 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|189341071|gb|ACD90474.1| radical SAM enzyme, Cfr family [Chlorobium limicola DSM 245]
          Length = 361

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 65/191 (34%), Gaps = 40/191 (20%)

Query: 96  RILLKLLHVCPVYCRFC------FRREMV-GSQKGTVLSSKDTEAALAYIQEK--SQIWE 146
              +     C ++C FC      FRR +  G     V           ++ E     I  
Sbjct: 110 TACISSQAGCSLHCSFCATGKTGFRRNLTSGEMTDQVF------LLNDHLAEHYGQTITN 163

Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIK-----HVQILRFHSRVPIVDPQRINPELIQCL 200
           ++F G G+PL+     L  + +TL           + +   +   I  PQ    +L+  L
Sbjct: 164 IVFMGMGEPLLNMTHVLDAI-ETLSNHNYRYSLSQRKISISTAGII--PQ---IDLLARL 217

Query: 201 KEAGKPVYIAIH--ANHPYE-FSEEAIA----AISRLANAGIILLSQSV-----LLKGIN 248
                 + +++H       E     A      A+ +       L  Q V     LL+ IN
Sbjct: 218 -PHKVKLAVSLHSAIQTNRESIMPAAREYPLPALKKSLAEYNRLSGQPVTLVYMLLRDIN 276

Query: 249 DDPEILANLMR 259
           D PE    L++
Sbjct: 277 DSPEDAKALVK 287


>gi|325294473|ref|YP_004280987.1| Radical SAM domain protein [Desulfurobacterium thermolithotrophum
           DSM 11699]
 gi|325064921|gb|ADY72928.1| Radical SAM domain protein [Desulfurobacterium thermolithotrophum
           DSM 11699]
          Length = 384

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 33/201 (16%), Positives = 69/201 (34%), Gaps = 30/201 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  I  ++   C + C  C R       +    S +D +  +  I + S+   ++ TGG+
Sbjct: 9   PKWIAWEITRRCNLNCIHC-RSSSTMESEQGDFSFEDGKKLMDDIAKISKPT-IVLTGGE 66

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
           PL      L++ +  L      +  R    +   +V     + E+ + +K  G K V ++
Sbjct: 67  PL------LREDVWDLAAYGTEKGFRMCIATNGVLV-----DDEVCKEMKRVGIKMVSLS 115

Query: 211 IHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
           +  +   E  ++             A        I  L  S   K    +   + N+ + 
Sbjct: 116 LDGSTA-EIHDDFRKQPGAYEGVMKAAELFKKHDIPFLINSSFTK---RNAFDIPNVYKK 171

Query: 261 FVELRIKPYYLHHPDLAAGTS 281
             E+  + +Y+          
Sbjct: 172 AREIGARAWYMFLVLPVGRAE 192


>gi|320191451|gb|EFW66101.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str.
           EC1212]
 gi|326340026|gb|EGD63833.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1125]
          Length = 419

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%)

Query: 94  PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
             R++   +  C  +C FC F +           +    ++ E  A + + + + I  V 
Sbjct: 30  RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVY 89

Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
           F GG P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 90  FGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138


>gi|269925522|ref|YP_003322145.1| protein of unknown function DUF512 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789182|gb|ACZ41323.1| protein of unknown function DUF512 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 487

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 192 INPELIQCLKEAGK-PVYIAIHANHP---YEF-----SEEAIAAISRLANAGIILLSQSV 242
           + P   + L+E    P+Y+++H   P           + + +  ++RL   GI + +Q V
Sbjct: 130 LTPSDWRRLEEQRLSPLYVSVHTTDPDLRRRLLGYPKAPDILEQLARLREIGIQVHTQLV 189

Query: 243 LLKGINDDP------EILANLMRTFVELRIKP 268
           L  G+ND P      + LA L  T + + + P
Sbjct: 190 LCPGLNDGPQLERTIDDLAALYPTVLSIAVVP 221


>gi|160889557|ref|ZP_02070560.1| hypothetical protein BACUNI_01981 [Bacteroides uniformis ATCC 8492]
 gi|156861074|gb|EDO54505.1| hypothetical protein BACUNI_01981 [Bacteroides uniformis ATCC 8492]
          Length = 432

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 14/113 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  +      ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G D  +   + L ++++ +  I  V+ +R H       P     +L + ++E 
Sbjct: 196 GVD--LYKKQMLPELVERISDIPGVEWIRLH----YAYPAHFPADLFRVMRER 242


>gi|328955533|ref|YP_004372866.1| iron-only hydrogenase maturation protein HydE [Coriobacterium
           glomerans PW2]
 gi|328455857|gb|AEB07051.1| iron-only hydrogenase maturation protein HydE [Coriobacterium
           glomerans PW2]
          Length = 365

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 67/211 (31%), Gaps = 30/211 (14%)

Query: 91  HRYPDRI----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
            RY D++    L+++ + C   C +C  R      +   L   D  A      E      
Sbjct: 64  QRYGDKVFIRGLIEISNRCRNDCLYCGIRRSNECAERYRLQPADIIACTDKGYELGFRTF 123

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDPQRINPELIQCLKEA 203
           V+  G DP   + + L  +++ ++   H      L    R      +  +    + L   
Sbjct: 124 VMQGGEDPFF-TDEVLCPLIERIKA-NHPDCAITLSLGERTRESYQRLFDAGADRYL--L 179

Query: 204 GKPVYIAIHAN--HPYEFSEEAIAAI-SRLAN------AGIILLS--QSVLLKGINDDPE 252
                   H    HP E S     A  S L        AG ++ S  Q+V  + + DD  
Sbjct: 180 RHETATDAHYRRLHPSELSLATRKACLSNLKEIGYQTGAGFMVGSPYQTV--ENLADDML 237

Query: 253 ILANLMRTFVELR-IKPYYLHHPDLAAGTSH 282
            L  L    V +    P+            H
Sbjct: 238 YLDELQPQMVGIGPFIPH-----RDTPFRDH 263


>gi|317480049|ref|ZP_07939161.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. 4_1_36]
 gi|316903791|gb|EFV25633.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. 4_1_36]
          Length = 432

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 14/113 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  +      ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G D  +   + L ++++ +  I  V+ +R H       P     +L + ++E 
Sbjct: 196 GVD--LYKKQMLPELVERISDIPGVEWIRLH----YAYPAHFPADLFRVMRER 242


>gi|310657443|ref|YP_003935164.1| radical sam domain-containing protein [Clostridium sticklandii DSM
           519]
 gi|308824221|emb|CBH20259.1| Radical SAM domain protein [Clostridium sticklandii]
          Length = 288

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 22/119 (18%)

Query: 97  ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIFTG 151
           +++++   C    C FC         K      ++ E     ++       ++  V    
Sbjct: 17  LIVQVTIGCAHNRCTFC------SMYKDKQFRIRELEEVFEDLKSARAVYPKVKRVFLAD 70

Query: 152 GDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGK 205
           GD L+L   +L  +L  +  +  +  +I  + +      PQ   R + E +  LKE G 
Sbjct: 71  GDALVLPTDKLIAILDKINELFPERERISAYAT------PQDIMRKSSEDLALLKEKGL 123


>gi|307293142|ref|ZP_07572988.1| RNA modification enzyme, MiaB family [Sphingobium chlorophenolicum
           L-1]
 gi|306881208|gb|EFN12424.1| RNA modification enzyme, MiaB family [Sphingobium chlorophenolicum
           L-1]
          Length = 449

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 14/110 (12%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQ 143
           L G   +      L ++  C  +C +C     V         S+   A L   +      
Sbjct: 143 LPGRTKQARPTAFLTIMEGCDKFCTYC-----VVPYTRGAEISRGWNAILDEAKALVDGG 197

Query: 144 IWEVIFTGG--DPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPI 186
           + E+   G   +       +     +  +++ L  I  ++ +R+ +  P 
Sbjct: 198 VREITLLGQNVNAWTGEDDKGRTQGMDGLVRELAKIDALKRIRYTTSHPN 247


>gi|291522320|emb|CBK80613.1| GTP cyclohydrolase subunit MoaA [Coprococcus catus GD/7]
          Length = 322

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 12/89 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-----AALAYIQEKSQIWEVIFTGGD 153
           L +   C + CR+C           + L  ++         L  I     I +V  TGG+
Sbjct: 14  LSVTDRCNLRCRYCM-----PPDGISCLPMREILTYEEIEHLCRIFAALGIHKVKITGGE 68

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           P +   K +  +++ ++ I  +  +   +
Sbjct: 69  PFV--RKNICHLIRRIKQIPGIDSVTLTT 95


>gi|158313057|ref|YP_001505565.1| RNA modification protein [Frankia sp. EAN1pec]
 gi|158108462|gb|ABW10659.1| RNA modification enzyme, MiaB family [Frankia sp. EAN1pec]
          Length = 595

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 49/139 (35%), Gaps = 16/139 (11%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           + LKL   C   C FC    FR   V  +   VL+  +  A     +           G 
Sbjct: 243 VPLKLSSGCDRRCAFCAIPSFRGSHVSRRPEEVLAEAEWLAGQGARELVLVSENSTSYGK 302

Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ-CLKEAGKPVYIA 210
           D   L   + L+K+L  L  +  +  +R       + P  + P L++  L   G   Y+ 
Sbjct: 303 D---LGDLRALEKLLPLLAAVPGIVRVR----TVYLQPAELRPSLLEVLLTTPGLAPYLD 355

Query: 211 IHANHPYEFSEEAIAAISR 229
           +   H    S   +  + R
Sbjct: 356 LSFQHA---SPAVLRRMRR 371


>gi|325962827|ref|YP_004240733.1| GTP cyclohydrolase subunit MoaA [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323468914|gb|ADX72599.1| GTP cyclohydrolase subunit MoaA [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 369

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 32/181 (17%)

Query: 88  GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           G+  RY  R     L L   C + C +C   E +    K  V+S+++    +    E+  
Sbjct: 26  GLADRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLAKQAVMSAEEIVRIVRIGVEQLG 85

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           + E+  TGG+PL+     L  ++  LR        R H  +PI      +  +    K A
Sbjct: 86  VRELRLTGGEPLVRHD--LVDIIAALR--------RNHPALPISM---TSNGVGLAKKAA 132

Query: 204 GKPVYIAIHAN------HPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGIN 248
                     N      H   F++           AG+          +   +VL++GIN
Sbjct: 133 ALKAAGLTRINVSLDSLHEETFTQLTRRPFLDQVLAGVDAAWAAGLGPVKLNAVLMRGIN 192

Query: 249 D 249
           D
Sbjct: 193 D 193


>gi|320011639|gb|ADW06489.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331]
          Length = 742

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 17/100 (17%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAY----IQEKSQIW-----E 146
           I+LK+   C + C  C+  E   + +      K   + A+++    + E +         
Sbjct: 11  IVLKVHSRCDLACDHCYIYEH--ADQSWRTRPKTISDEAISWTARRLAEHASAHALDSMS 68

Query: 147 VIFTGGDPLILSHKRL----QKVLKTLRYIKHVQILRFHS 182
           VI  GG+PL+    RL    +++   L  I  +  LR H+
Sbjct: 69  VILHGGEPLLAGPARLRRVCEELTAALNGIAELD-LRIHT 107


>gi|288930027|ref|ZP_06423868.1| Fe-S protein, radical SAM family [Prevotella sp. oral taxon 317
           str. F0108]
 gi|288328686|gb|EFC67276.1| Fe-S protein, radical SAM family [Prevotella sp. oral taxon 317
           str. F0108]
          Length = 456

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 37/204 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   CP +C FC++      + G    +   +AAL  I         ++   D L+ S
Sbjct: 168 LVVSRGCPHHCDFCYKDAFY--EGGKFFYTARVDAALKEIDALPGRH--LYFLDDHLLGS 223

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP-ELIQCLKEAG-KPVYIAIHA--- 213
            +   ++ + ++ +  V    F S   +   Q I   +LI+   EAG + V+I       
Sbjct: 224 KRFAAELFEGMKGMNRV----FQSAATV---QSILEGDLIEKAAEAGMRSVFIGFETFSP 276

Query: 214 ------NHPYEFSEEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRTFVELRI 266
                 N       +  AA+ RL + GI++    V  L    DD ++     R  V+  +
Sbjct: 277 ENLKASNKCQNLQRDYSAAVQRLHSLGIMINGSFVFGLDH--DDADV----FRRTVDWGV 330

Query: 267 KP------YYLHHPDLAAGTSHFR 284
                   Y  H      GT  F+
Sbjct: 331 DNAITTATY--HILTPYPGTRQFQ 352


>gi|284036269|ref|YP_003386199.1| MiaB-like tRNA modifying enzyme [Spirosoma linguale DSM 74]
 gi|283815562|gb|ADB37400.1| MiaB-like tRNA modifying enzyme [Spirosoma linguale DSM 74]
          Length = 449

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 50/126 (39%), Gaps = 16/126 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C   C +C      G  +   ++  +   A   I E+  + E++ TG  
Sbjct: 150 RTRTFLKVQDGCDYPCAYCTIPLARGKSRSDTIA--NVVKAAREIAER-GVKEIVLTGVN 206

Query: 152 -GDPLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
            GD  +++    +    +++ L  +  ++  R  S    ++P  +  E+I  + ++ +  
Sbjct: 207 IGDFGLINGQRTETFFDLVQALDEVDGIERFRISS----IEPNLLTDEIIAFVAQSKR-- 260

Query: 208 YIAIHA 213
               H 
Sbjct: 261 -FVPHF 265


>gi|190570899|ref|YP_001975257.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|213019415|ref|ZP_03335221.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
 gi|190357171|emb|CAQ54586.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
           quinquefasciatus Pel]
 gi|212994837|gb|EEB55479.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex
           quinquefasciatus JHB]
          Length = 408

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 29/159 (18%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +++ + C   C FC   E  G+ +   +++   E    +I+      EV+FTG D
Sbjct: 123 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVPVNNI-IEQIKIFIEN--GYQEVVFTGVD 179

Query: 154 PL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                  +   + L  +++  L+ I  ++ LR  S + + +   ++ EL+  +    + +
Sbjct: 180 ITDFGTDLFGKQSLGSMVRRVLKDIPQLKRLRL-SSIDVAE---VDDELMDLIANESR-L 234

Query: 208 YIAIHAN---------------HPYEFSEEAIAAISRLA 231
              +H +               H  E   E    +  L 
Sbjct: 235 MPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 273


>gi|170686175|ref|ZP_02877397.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0465]
 gi|170669872|gb|EDT20613.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str.
           A0465]
          Length = 377

 Score = 38.2 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 9   PFIVIWELTRACQLKCLHC-RAEAQYHRHSLELTFEEGKKLIDDIYEMENPML---VFTG 64

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 65  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 115

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H        +  + AI  L    I +   +V+     D  E +A L+  
Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 175

Query: 261 F 261
            
Sbjct: 176 L 176


>gi|325002626|ref|ZP_08123738.1| pyrroloquinoline quinone biosynthesis protein PqqE [Pseudonocardia
           sp. P1]
          Length = 360

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 41/244 (16%), Positives = 87/244 (35%), Gaps = 38/244 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L +L + CP+ C +C     +       LS+ D +   A       + +   +GG+PL+
Sbjct: 9   LLAELTYRCPLACAYCSNPIELARYDDE-LSTADWQRVFAE-AADLGVLQCHLSGGEPLL 66

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANH 215
                L ++++T + +     L       +     ++    + L+ AG   V +++ A+ 
Sbjct: 67  RRD--LTELVRTAQSLGMYTNL-------VTSAIGLSRPRAEALRAAGLDHVQVSVQADE 117

Query: 216 PYEFSEEA--------IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           P      A        I A   +   G  L    VL +   D    +  L+      R++
Sbjct: 118 PATSDRIAGVRSFERKIEACRLVRELGWPLTVNVVLHRQNIDRIGEIITLVEELQADRVE 177

Query: 268 ----PYY------LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317
                YY            +         ++  ++IV + + +++G      +  LP  Y
Sbjct: 178 LANTQYYGWAWKNRSSLLPSREQ------LDRAEEIVTAARSRLAGRM--EIVHVLPDYY 229

Query: 318 GKVK 321
            +  
Sbjct: 230 SRYP 233


>gi|309792044|ref|ZP_07686520.1| MiaB-like tRNA modifying enzyme YliG [Oscillochloris trichoides
           DG6]
 gi|308225937|gb|EFO79689.1| MiaB-like tRNA modifying enzyme YliG [Oscillochloris trichoides
           DG6]
          Length = 439

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 38/202 (18%)

Query: 59  QFIPQKEELNILPEEREDPIGDN-----NHSPLKGIVHRYPDR-ILLKLLHVCPVYCRFC 112
           Q   +  E+   P  +  P+ +             I    P     LK+   C + C FC
Sbjct: 100 QAWTRINEVIAPPASQPIPLLETPAPAYADWRSTPIQRLQPSHSAYLKISDGCNLRCAFC 159

Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT-------GGDPLILSHKRLQ 163
                        ++SK   A L  +++     + E++         G D L L    L 
Sbjct: 160 TI-----PSIKGDMASKPIRAVLGEVEQLVGQGVQEIVLVAQHLTDYGRD-LGLQDG-LA 212

Query: 164 KVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIHANHPYEF 219
            +L+ +  I  H   +R         P  I+  LI+ + E  + +    + +   HP   
Sbjct: 213 TLLEEMCQIVPHSGWIRL----MYAYPHGISERLIRVMAEHPQVLAYLDMPLQHAHPDTL 268

Query: 220 --------SEEAIAAISRLANA 233
                   +E   A I +L  A
Sbjct: 269 RRMRRPPDTEHTRAVIQQLRAA 290


>gi|302386178|ref|YP_003822000.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
 gi|302196806|gb|ADL04377.1| Radical SAM domain protein [Clostridium saccharolyticum WM1]
          Length = 337

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     + C + C+ C++    G++K   L++++ +  +  I   +    +IF+GG+PL+
Sbjct: 3   VSWMTTNQCNLKCKHCYQDA--GNKKTDELTTEEAKRLIDEIAR-AGFRIMIFSGGEPLM 59

Query: 157 LSH 159
              
Sbjct: 60  RPD 62


>gi|270296681|ref|ZP_06202880.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. D20]
 gi|270272668|gb|EFA18531.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. D20]
          Length = 432

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 14/113 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  +      ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G D  +   + L ++++ +  I  V+ +R H       P     +L + ++E 
Sbjct: 196 GVD--LYKKQMLPELVERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRER 242


>gi|257456539|ref|ZP_05621735.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
 gi|257446199|gb|EEV21246.1| conserved hypothetical protein [Treponema vincentii ATCC 35580]
          Length = 498

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 38/222 (17%), Positives = 72/222 (32%), Gaps = 39/222 (17%)

Query: 17  ANLIKKEQIDEIKEISNHYS-------IALTPVIANLINPHNPND-----PIARQFIP-- 62
              ++  +I+ +      +         A+    A L+      D        R ++   
Sbjct: 107 YAQLEAAEIEALHPHVLAFPGQQKDLLTAIPAYFAELVRGSAYFDTAFFLSALRTYLSGL 166

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHR-----------YPDRILLKLLHVCPVYCRF 111
                   P   + P+GD +     GI  +           +  R LLK+   C   C +
Sbjct: 167 TGRIPQDEPRHHK-PVGDQSG---HGIQRKPLFALSSPHFLFHSRALLKIQDGCNDACAY 222

Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           C R  +   +  ++ +++  E       E++ + EV  TG + L             L+ 
Sbjct: 223 C-RIRLARGKSVSLPAAEVLERLR--CIEETGVPEVTLTGVN-LSQYRSEAGDFAGILKL 278

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           I     +R   R+  + P RI+  L+  L        I  H 
Sbjct: 279 ILENSTIRV--RISSLYPDRIDEALVPLLAHPR----ICPHF 314


>gi|77920251|ref|YP_358066.1| Fe-S oxidoreductase coenzyme synthesis protein [Pelobacter
           carbinolicus DSM 2380]
 gi|77546334|gb|ABA89896.1| Fe-S oxidoreductase, putative coenzyme synthesis protein
           [Pelobacter carbinolicus DSM 2380]
          Length = 344

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 37/223 (16%), Positives = 76/223 (34%), Gaps = 54/223 (24%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDPLILS 158
             C + C +C       +  GT L+ +    +  A L           V+  GG+PL+  
Sbjct: 33  RQCDLRCLYC------YADSGTALADELALSEIYAVLEQAMALGIRRVVVLGGGEPLMYP 86

Query: 159 HKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
              + ++++ L    H   + +    +        +I  EL Q     G  V   +  N 
Sbjct: 87  --HVVEIMQYLAQ--HGIGIDLFTNGT--------QITAELAQEFVRLG--VAPVVKMNS 132

Query: 216 PYEFSEEA-----------IAAISRLANAG-----IILLSQSVLLKGINDDPEILANLMR 259
             +  ++               +  L  AG     + L +Q+V+ +    + + L ++ R
Sbjct: 133 RRQQVQDFLAGRQGAYADIRRGLELLMQAGYPAEGLPLGAQTVVCRQ---NIDELPDMWR 189

Query: 260 TFVELRIKPYYLHHPDLA---AGTSH--FRLTIEEGQKIVASL 297
              +  I PY      +        H    +++ E Q +  +L
Sbjct: 190 WLRDRHIIPY---VELMTWQGRARRHPELEVSVAEMQGLFETL 229


>gi|315223707|ref|ZP_07865557.1| 2-methylthioadenine synthetase [Capnocytophaga ochracea F0287]
 gi|314946282|gb|EFS98281.1| 2-methylthioadenine synthetase [Capnocytophaga ochracea F0287]
          Length = 437

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 23/131 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151
             R  LK+   C   C +C            +  S   E  +A  +      I E++ TG
Sbjct: 140 RTRAFLKVQDGCDYKCTYCTI-----PMARGISRSDTIENIIANAKKISDKGIKEIVLTG 194

Query: 152 ---GDPLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
              GD                ++++ L  ++ ++ LR  S    ++P  I  E I  + +
Sbjct: 195 VNIGDYGKGEFGNKKHEHTFLELVQALDKVEGIERLRISS----IEPNLIKDETIDFIAQ 250

Query: 203 AGKPVYIAIHA 213
           +        H 
Sbjct: 251 SN---SFVPHF 258


>gi|146329852|ref|YP_001210121.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dichelobacter nodosus
           VCS1703A]
 gi|229890515|sp|A5EXA7|MIAB_DICNV RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|146233322|gb|ABQ14300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dichelobacter nodosus
           VCS1703A]
          Length = 456

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 15/124 (12%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
              + ++  C  YC +C      G++        D  A  A +  +  + E+   G +  
Sbjct: 151 TAYVSVMEGCSKYCTYCVVPYTRGAEISRPF--DDVLAECATLAAQ-GVREINLLGQNVN 207

Query: 155 ---LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
                +       L  +++ +  I ++  +RF +      P   +  LI+  +   K + 
Sbjct: 208 AYRGAMHDGTIADLALLIEYVAAIPNIGRIRFTTSH----PSEFSDALIETYRRVPK-LV 262

Query: 209 IAIH 212
             +H
Sbjct: 263 SHLH 266


>gi|296109434|ref|YP_003616383.1| Radical SAM domain protein [Methanocaldococcus infernus ME]
 gi|295434248|gb|ADG13419.1| Radical SAM domain protein [Methanocaldococcus infernus ME]
          Length = 372

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 17/146 (11%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTGG 152
           ++++L +   C   C +C   E    +     + +   +    I+E        V  TGG
Sbjct: 28  EKLVLFITGTCKNNCYYCPLSEKRKDKDVIYANERLISSVEEAIEEAKLCSSRGVGITGG 87

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           +PL L   R +K L+ L+     +   FH+      P+ I  E ++ +KE  +   + IH
Sbjct: 88  NPL-LRVDRTKKYLEALKK----EFKDFHA-HLYTTPETITTENLEKIKELDE---LRIH 138

Query: 213 ----AN--HPYEFSEEAIAAISRLAN 232
                N  +  EF +E I  I     
Sbjct: 139 PTKIFNIGYKEEFVDELIKKIRLAKK 164


>gi|256828055|ref|YP_003156783.1| molybdenum cofactor biosynthesis protein A [Desulfomicrobium
           baculatum DSM 4028]
 gi|256577231|gb|ACU88367.1| molybdenum cofactor biosynthesis protein A [Desulfomicrobium
           baculatum DSM 4028]
          Length = 330

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 21/163 (12%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C  + E        +LS ++    +  + +++ + +V  TGG+P   
Sbjct: 15  LSITDRCNLRCLYCRPQSEWTFMPHEQILSFEEMAELVD-VAKEAGVEKVRLTGGEPFAR 73

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
                      L        LR  +    +   R++      L+EAG    + I  +   
Sbjct: 74  KDFI--PFTGRLHAKYPDLDLRITTNG-TLLSGRVDE-----LREAGVS-CLNISLDTLQ 124

Query: 218 -----EFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
                E +     ++  A I      G+ +    V LKGINDD
Sbjct: 125 RKKFEEITKVDAYDQVRAGIDACLAGGLRVKVNVVALKGINDD 167


>gi|167469633|ref|ZP_02334337.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis FV-1]
          Length = 212

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156
           L +  VC   C +C           + LS  +              +I     TGG+P +
Sbjct: 17  LSITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAFALLGTEKIR---LTGGEPSM 73

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215
                   ++ T+R    ++ L         +  R+  ++ Q  ++AG    I +  +  
Sbjct: 74  RRD--FTDIIATIRQNPAIRTL-----AVTTNGYRLVRDVAQW-RDAGLT-AINVSVDSL 124

Query: 216 -PYEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
            P +F          + +  I    +AG   +   +VL++ +ND 
Sbjct: 125 DPRQFHAITGQDKFYQVMQGIDAAFDAGFDKVKVNAVLMRDVNDR 169


>gi|157825701|ref|YP_001493421.1| MiaB-like tRNA modifying enzyme [Rickettsia akari str. Hartford]
 gi|157799659|gb|ABV74913.1| MiaB-like tRNA modifying enzyme [Rickettsia akari str. Hartford]
          Length = 416

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 16/126 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +++ + C  +C FC      G  K   +        + Y+       EV+FTG D
Sbjct: 132 KSRAFIQVQNGCDHFCTFCIIP--YGRGKSRSVPIGAIAEQVKYLVLN-GFKEVVFTGVD 188

Query: 154 P-LILSH----KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                S         +++K  L  +  ++ LR  S + + +   I+ EL + +  + +  
Sbjct: 189 VTAYGSDLPGSPTFAQMIKRVLNLVPELKRLRL-SSIDVAE---IDDELFELIAYSER-- 242

Query: 208 YIAIHA 213
            I  H 
Sbjct: 243 -IMPHF 247


>gi|22126899|ref|NP_670322.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis KIM 10]
 gi|45440835|ref|NP_992374.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108807062|ref|YP_650978.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
           Antiqua]
 gi|108813002|ref|YP_648769.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
           Nepal516]
 gi|145599807|ref|YP_001163883.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
           Pestoides F]
 gi|165924730|ref|ZP_02220562.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166211503|ref|ZP_02237538.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167423923|ref|ZP_02315676.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|21959935|gb|AAM86573.1|AE013903_10 molybdopterin biosynthesis protein A [Yersinia pestis KIM 10]
 gi|45435693|gb|AAS61251.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108776650|gb|ABG19169.1| GTP cyclohydrolase subunit MoaA [Yersinia pestis Nepal516]
 gi|108778975|gb|ABG13033.1| GTP cyclohydrolase subunit MoaA [Yersinia pestis Antiqua]
 gi|145211503|gb|ABP40910.1| GTP cyclohydrolase subunit MoaA [Yersinia pestis Pestoides F]
 gi|165923790|gb|EDR40922.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166207274|gb|EDR51754.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167056772|gb|EDR66535.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Mediaevalis str. K1973002]
          Length = 341

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156
           L +  VC   C +C           + LS  +              +I     TGG+P +
Sbjct: 32  LSITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAFALLGTEKIR---LTGGEPSM 88

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215
                   ++ T+R    ++ L         +  R+  ++ Q  ++AG    I +  +  
Sbjct: 89  RRD--FTDIIATIRQNPAIRTL-----AVTTNGYRLVRDVAQW-RDAGLT-AINVSVDSL 139

Query: 216 -PYEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
            P +F          + +  I    +AG   +   +VL++ +ND 
Sbjct: 140 DPRQFHAITGQDKFYQVMQGIDAAFDAGFDKVKVNAVLMRDVNDR 184


>gi|323701900|ref|ZP_08113570.1| MiaB-like tRNA modifying enzyme YliG [Desulfotomaculum nigrificans
           DSM 574]
 gi|323533204|gb|EGB23073.1| MiaB-like tRNA modifying enzyme YliG [Desulfotomaculum nigrificans
           DSM 574]
          Length = 445

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 22/143 (15%)

Query: 96  RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEV 147
              +K+   C   C +C     R         ++++   T  A        +I     + 
Sbjct: 148 TAYIKVAEGCDNRCAYCAIPNIRGRFRSRPLESIVAEAKTLVA----NGTREIILIAQDT 203

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
              G D  I     L K+L  L+ I  ++ +R         P R    LI+ + +  K  
Sbjct: 204 TRYGQD--IYGQYSLDKLLWLLQDIPDLKWIRI----LYCYPNRFTDGLIKAIAQLPKVC 257

Query: 208 -YIAIHANHPYEFSEEAIAAISR 229
            YI +   H      E + A+ R
Sbjct: 258 KYIDLPVQHAN---NEILRAMGR 277


>gi|322383763|ref|ZP_08057514.1| hypothetical protein PL1_1683 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321151975|gb|EFX44918.1| hypothetical protein PL1_1683 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 389

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 6/86 (6%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160
            ++C VYCRFC      GS +G VL  +   +     I       E++  GG      + 
Sbjct: 74  TNICDVYCRFCAFYRDPGSAEGYVLPDETIFQKIQETI--DVGGTEILMQGG---TNPNL 128

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPI 186
           +       LR IK    +  HS  P 
Sbjct: 129 KFSYYTNLLREIKKRFDITMHSFSPA 154


>gi|320193986|gb|EFW68619.1| coproporphyrinogen III oxidase [Escherichia coli WV_060327]
          Length = 419

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%)

Query: 94  PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
             R++   +  C  +C FC F +           +    ++ E  A + + + + I  V 
Sbjct: 30  RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEREADSVLHQSAPIHAVY 89

Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
           F GG P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 90  FGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138


>gi|322435966|ref|YP_004218178.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
 gi|321163693|gb|ADW69398.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9]
          Length = 532

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 40/182 (21%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILS 158
             CP +C FC          G     +  ++ +  I    +I        D    P+ L+
Sbjct: 164 RGCPKHCSFCSVWR----TDGQKPRQRQFQSVIDEIVNLRRIGFRFIALADDNFYPVTLT 219

Query: 159 HKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
             RL +       L  L  I+  +                  +L++ L +  K +     
Sbjct: 220 DLRLAREQGNQAKLDELIAIRSERF-----------------QLMEELSKLPKDMVFFTQ 262

Query: 213 AN-HPYEFSEEAIAAISRLANAGIILLSQSVL---LKGI----NDDPEILANLMRTFVEL 264
                 E   + + A+ R    G ++  ++V    LK +    N   E LA  ++TF + 
Sbjct: 263 ITMEAGE-DGDYLDAMRRANIKGALVGVEAVTPEGLKAVFKDFNYSGEALAKQLQTFKKH 321

Query: 265 RI 266
            +
Sbjct: 322 GV 323


>gi|269469075|gb|EEZ80630.1| pyruvate-formate lyase-activating enzyme [uncultured SUP05 cluster
           bacterium]
          Length = 207

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 5/64 (7%)

Query: 93  YPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           YPD +   +    CP  CR+C   +++ + K T     D E  + +I+ +  + + V+F+
Sbjct: 18  YPDNLSCVVFTQGCPWRCRYCHNHDLIPTSKQTQF---DWEQIVEFIKTRVGLLDAVVFS 74

Query: 151 GGDP 154
           GG+P
Sbjct: 75  GGEP 78


>gi|218133712|ref|ZP_03462516.1| hypothetical protein BACPEC_01581 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991087|gb|EEC57093.1| hypothetical protein BACPEC_01581 [Bacteroides pectinophilus ATCC
           43243]
          Length = 447

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 11/124 (8%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           LK+   C   C +C     V     +V   +  + A   + E+     ++      L  +
Sbjct: 150 LKIAEGCDKCCTYCII-PKVRGSYRSVPMDELIKQAED-LAEQGVKELILVAQETSLYGT 207

Query: 159 H----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHA 213
                K L ++L  L  I  ++ +R         P+ I+  LIQ +K   K   Y+ +  
Sbjct: 208 DLYGEKSLHRLLHELAAIDGIEWIRI----LYCYPEEIDDTLIQAIKSEPKVCHYLDLPI 263

Query: 214 NHPY 217
            H  
Sbjct: 264 QHAN 267


>gi|167465547|ref|ZP_02330636.1| hypothetical protein Plarl_23811 [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 377

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 6/86 (6%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160
            ++C VYCRFC      GS +G VL  +   +     I       E++  GG      + 
Sbjct: 62  TNICDVYCRFCAFYRDPGSAEGYVLPDETIFQKIQETI--DVGGTEILMQGG---TNPNL 116

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPI 186
           +       LR IK    +  HS  P 
Sbjct: 117 KFSYYTNLLREIKKRFDITMHSFSPA 142


>gi|147678706|ref|YP_001212921.1| arylsulfatase regulator [Pelotomaculum thermopropionicum SI]
 gi|146274803|dbj|BAF60552.1| arylsulfatase regulator [Pelotomaculum thermopropionicum SI]
          Length = 451

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 4/66 (6%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFT 150
           PD ++L L + C + CR+C + E+  + +   +S      A+ ++      ++   + F 
Sbjct: 68  PDTLVLMLTYACNMACRYCCQGEIP-AARENQMSQAVAYRAVDWLMRNSADAETVNIGFF 126

Query: 151 GGDPLI 156
           GG+PL+
Sbjct: 127 GGEPLL 132


>gi|82617353|emb|CAI64265.1| hypothetical protein [uncultured archaeon]
 gi|268323060|emb|CBH36648.1| hypothetical protein, radical SAM superfamily [uncultured archaeon]
          Length = 401

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 41/198 (20%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKDTEAALAYIQEKSQIW---- 145
           +++L+   + C   C FC+   + G      ++G +    D +  +A  ++   +     
Sbjct: 56  EKLLINPYNGCSHNCLFCYSHALGGYFSIFRERGVLAVFNDFDKIIA--RQLDGLNVASC 113

Query: 146 EVIFTGGDPLI-------LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
             +    DP         LS K L+  +     I  VQ     S         I+   ++
Sbjct: 114 GYLSPVTDPFQRINAKYELSEKILKAFIDR--NIP-VQFTTKGS---------ISERALK 161

Query: 199 CLKEAGKP---VYIAIHANHPYE-------FSEEAIAAISRLANAGIILLSQS-VLLKGI 247
            +K+       V I   A    E        + E +  I RLA+AGI  + +   ++  +
Sbjct: 162 IIKKQEHSFGEVSILTMAEDKRERLMAGGASTAELVRNIERLADAGIFAVCRIDPIIPYV 221

Query: 248 NDDPEILANLMRTFVELR 265
            DD E L  L++  V+  
Sbjct: 222 TDDEEGLETLVQKVVDAG 239


>gi|189465617|ref|ZP_03014402.1| hypothetical protein BACINT_01975 [Bacteroides intestinalis DSM
           17393]
 gi|189437891|gb|EDV06876.1| hypothetical protein BACINT_01975 [Bacteroides intestinalis DSM
           17393]
          Length = 432

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 14/115 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----QI--WEVIFT 150
             LK+   C   C +C    + G      +  ++    + Y+  K     QI   E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPV--EEILDEVRYLVNKGVKEFQIIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G D  +   + L ++++ +  I  V+ +R H       P     +L + ++E   
Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERPN 244


>gi|160931620|ref|ZP_02079015.1| hypothetical protein CLOLEP_00452 [Clostridium leptum DSM 753]
 gi|156869491|gb|EDO62863.1| hypothetical protein CLOLEP_00452 [Clostridium leptum DSM 753]
          Length = 437

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 10/73 (13%)

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGIILLSQSVLLK 245
           E+ + +K    P+ I++H  +P E          + EA++ I R A AGI +  Q VL  
Sbjct: 133 EISRIIKMHISPMNISVHTTNP-ELRVKMMKNPRAGEALSIIRRFAQAGIKINCQIVLCP 191

Query: 246 GINDDPEILANLM 258
           G ND  E+   L 
Sbjct: 192 GYNDGEELKRTLS 204


>gi|288925016|ref|ZP_06418952.1| 2-methylthioadenine synthetase [Prevotella buccae D17]
 gi|288338206|gb|EFC76556.1| 2-methylthioadenine synthetase [Prevotella buccae D17]
          Length = 450

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 19/126 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQIWEVIFT 150
             R  LK+   C  +C +C      G  +   ++S   +  EAAL          E++ T
Sbjct: 153 RTRYFLKVQDGCSYFCTYCTIPYARGFSRNPSIASLVEQAREAALE------GGREIVLT 206

Query: 151 G---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           G   GD    +H+    ++K L  ++ ++  R  S    ++P   + EL++    +    
Sbjct: 207 GVNIGDFGATTHESFLDLVKALDEVEGIERFRISS----LEPDLCSDELVEYCSISR--- 259

Query: 208 YIAIHA 213
               H 
Sbjct: 260 AFMPHF 265


>gi|237755862|ref|ZP_04584458.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691973|gb|EEP60985.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 365

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 10/107 (9%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAA----LAYIQEKSQIWEVIFTGGDPLILSHK 160
           C + C +C     V  +    L  +  EA     L Y+     I  + F GG P  L  +
Sbjct: 12  CNIKCPYCDFTSFVWQED--KLKDRYVEALKKELLMYLDNDFDIQTIYFGGGTPSTLKPE 69

Query: 161 RLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           ++ +++  ++  +KH + L        ++P+    +  + +K+AG  
Sbjct: 70  KIAEIIDFIKNNVKHQKNLEI---TVEINPKTYEYDEFKIIKDAGVN 113


>gi|228990331|ref|ZP_04150297.1| Radical SAM domain protein [Bacillus pseudomycoides DSM 12442]
 gi|228769407|gb|EEM18004.1| Radical SAM domain protein [Bacillus pseudomycoides DSM 12442]
          Length = 468

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149
           Y   + L + H C + C +CF  +   +    ++S +  + A+ Y+ E     +  ++ F
Sbjct: 97  YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDF 156

Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
            GG+PL+   K +++++   R 
Sbjct: 157 FGGEPLMA-WKVVKQIVAYARS 177


>gi|228996442|ref|ZP_04156083.1| Radical SAM domain protein [Bacillus mycoides Rock3-17]
 gi|228763325|gb|EEM12231.1| Radical SAM domain protein [Bacillus mycoides Rock3-17]
          Length = 468

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149
           Y   + L + H C + C +CF  +   +    ++S +  + A+ Y+ E     +  ++ F
Sbjct: 97  YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDF 156

Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
            GG+PL+   K +++++   R 
Sbjct: 157 FGGEPLMA-WKVVKQIVTYARS 177


>gi|229004086|ref|ZP_04161888.1| Radical SAM domain protein [Bacillus mycoides Rock1-4]
 gi|228757184|gb|EEM06427.1| Radical SAM domain protein [Bacillus mycoides Rock1-4]
          Length = 468

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149
           Y   + L + H C + C +CF  +   +    ++S +  + A+ Y+ E     +  ++ F
Sbjct: 97  YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDF 156

Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
            GG+PL+   K +++++   R 
Sbjct: 157 FGGEPLMA-WKVVKQIVAYARS 177


>gi|207092233|ref|ZP_03240020.1| hypothetical protein HpylHP_04483 [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 418

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRGSNIAQLIKKLSQIAGLKRIRIGS 221


>gi|170289684|ref|YP_001736500.1| Fe-S oxidoreductase [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170173764|gb|ACB06817.1| Predicted Fe-S oxidoreductase [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 573

 Score = 38.2 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 36/170 (21%)

Query: 99  LKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAY-IQEKSQI-WEVIFTGG 152
           L + + C + C +CF    R   V        S ++ +  +   ++EK      V  TGG
Sbjct: 125 LVVTNRCNMDCWYCFFYAERMGYVYE-----PSLEEIDRMVDLMLKEKPAHGNAVQITGG 179

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA- 210
           +PL L    ++  +  L   K V  ++ ++       +   P L++ L+EAG   +Y + 
Sbjct: 180 EPL-LRDDIVE--IVKLLKRKGVTHIQLNTEGVAFLEK---PWLMKELREAGVNTIYFSF 233

Query: 211 ----------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                      H   PY       ++++ L      +L  +V+ KGIND 
Sbjct: 234 DGVTPIANPKTHWETPYILDLARKSSMTSL------VLVPTVI-KGINDR 276


>gi|313906547|ref|ZP_07839877.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
 gi|313468616|gb|EFR63988.1| Radical SAM domain protein [Eubacterium cellulosolvens 6]
          Length = 218

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +      C + C +C    M  ++ G   + +  E  ++YI+E   +  V  TGG+PL+
Sbjct: 21  AVFVRFRGCNLNCSYC--DTMWANEPGCPYAEESPEQIVSYIEETK-VKNVTLTGGEPLL 77


>gi|261402234|ref|YP_003246458.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
 gi|261369227|gb|ACX71976.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7]
          Length = 287

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 8/76 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           +Y   ++LK+ + C + C +C+      ++    +  K  + ++ Y+       ++ FTG
Sbjct: 2   KY---LILKITNRCNLNCIYCY----ANNKNDKDMDFKTAKRSIDYLLNLDDKLKIQFTG 54

Query: 152 GDPLILSHKRLQKVLK 167
           G+PL L+ K ++KV+K
Sbjct: 55  GEPL-LNFKLIEKVVK 69


>gi|83944995|ref|ZP_00957361.1| hypothetical protein OA2633_10209 [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851777|gb|EAP89632.1| hypothetical protein OA2633_10209 [Oceanicaulis alexandrii
           HTCC2633]
          Length = 468

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 24/124 (19%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151
              + +   C  +C FC     V         S+  +  +A ++      + EV   G  
Sbjct: 166 TAFVTVQEGCDKFCTFC-----VVPYTRGAEWSRPVDQIVAEVRALAAKGVREVTLLGQN 220

Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
                     GDP       L ++++ L  I  ++ +RF +      P+ ++ +LIQ   
Sbjct: 221 VNAFHGEAPKGDPEGGVWG-LGRLVRHLAKIGGIERIRFTTSH----PKDMDDDLIQAFA 275

Query: 202 EAGK 205
           +  K
Sbjct: 276 DEPK 279


>gi|194333737|ref|YP_002015597.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Prosthecochloris aestuarii DSM 271]
 gi|194311555|gb|ACF45950.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Prosthecochloris aestuarii DSM 271]
          Length = 251

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 93  YPDRI-LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           YP  I  +     C + C +C   E+V   +   L +++ E  + ++     + + V+ T
Sbjct: 33  YPGMISAVLYTAGCNLRCIYCHNPELVLPDRIQRLGAEERETIVTWLVRNRMLLDAVVVT 92

Query: 151 GGDPLILS--HKRLQKV 165
           GG+PL+       L  +
Sbjct: 93  GGEPLLHPALPGLLGWI 109


>gi|295102362|emb|CBK99907.1| GTP cyclohydrolase subunit MoaA [Faecalibacterium prausnitzii L2-6]
          Length = 325

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  +C + CR+C    +   ++  VL+ ++    LA +  +  +  V  TGG+PL+  
Sbjct: 14  LSVTDLCNLRCRYCMPDGVEKLEREAVLTYEEFLR-LAALFARCGVDTVRVTGGEPLV-- 70

Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182
            K + +++  L+ I  ++ +   +
Sbjct: 71  RKGVDQLVAGLKAIPGIRKVTMTT 94


>gi|255658436|ref|ZP_05403845.1| organic radical activating enzyme family protein [Mitsuokella
           multacida DSM 20544]
 gi|260849772|gb|EEX69779.1| organic radical activating enzyme family protein [Mitsuokella
           multacida DSM 20544]
          Length = 213

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 6/77 (7%)

Query: 92  RYPDRILLKLLH------VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
            YP R L            CP  C  C   E+  +Q G  LS +  +  L     +  + 
Sbjct: 13  LYPVRALGPGNRLGIWLAGCPRRCPGCSNPELWQAQAGQALSQERLQELLRPFLSREDLG 72

Query: 146 EVIFTGGDPLILSHKRL 162
            V+ TGGDP   +   L
Sbjct: 73  GVVVTGGDPFFQADALL 89


>gi|224024976|ref|ZP_03643342.1| hypothetical protein BACCOPRO_01707 [Bacteroides coprophilus DSM
           18228]
 gi|224018212|gb|EEF76210.1| hypothetical protein BACCOPRO_01707 [Bacteroides coprophilus DSM
           18228]
          Length = 474

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 73  EREDP-IGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           E EDP + +  ++  + I  R Y +RI+    L L + C   C +C       +     L
Sbjct: 60  ECEDPQLLEEIYALAREIKQRFYGNRIVMFAPLYLSNYCVNSCTYCPYHIKNKTIARKKL 119

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
           + ++    +  +Q+       +  G DPL    + + + ++T+  IKH
Sbjct: 120 TQEEIRREVIALQDMGHKRLALEAGEDPLHNPIEYILESIQTIYSIKH 167


>gi|148256302|ref|YP_001240887.1| putative arylsulfatase regulatory protein [Bradyrhizobium sp.
           BTAi1]
 gi|146408475|gb|ABQ36981.1| putative Arylsulfatase regulatory protein [Bradyrhizobium sp.
           BTAi1]
          Length = 370

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 23/161 (14%), Positives = 50/161 (31%), Gaps = 37/161 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPL 155
           ++    C V C +C+   +       ++S     AA  ++ +    +  + V++  G+PL
Sbjct: 1   MQPTAFCNVDCDYCY---LPNRTDPRIMSHDIVAAAADFVFQGGLDASDFTVVWHAGEPL 57

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPI--VDP-------QRINPELIQCLKEAGKP 206
           ++         +           R  +  P     P         IN +        G  
Sbjct: 58  VVPPS---WYREAFA--------RIGAAAPANKAVPHAIQTNGMLINDDWCDLFLAHGVR 106

Query: 207 VYIAIH---ANH-PYEFS-------EEAIAAISRLANAGII 236
           V ++I      H     +         A+  + +L   G+ 
Sbjct: 107 VGVSIDGPAFLHDARRRTRSGKGTHAAALRGLRKLRERGVP 147


>gi|146303298|ref|YP_001190614.1| radical SAM domain-containing protein [Metallosphaera sedula DSM
           5348]
 gi|145701548|gb|ABP94690.1| Radical SAM domain protein [Metallosphaera sedula DSM 5348]
          Length = 400

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 44/77 (57%), Gaps = 6/77 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156
           L L + C   C +CF++   G +K   ++ +  +  + Y++++ +  +V  T  GG+PL 
Sbjct: 73  LLLTYNCNFNCTYCFQK---GFRKDLTVTEEVMKGFINYVRKRERGRKVRVTFFGGEPL- 128

Query: 157 LSHKRLQKVLKTLRYIK 173
           L  K+++++ ++L  +K
Sbjct: 129 LELKKIEEISRSLSDLK 145


>gi|157827747|ref|YP_001496811.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii OSU
           85-389]
 gi|229890631|sp|A8GY24|MIAB_RICB8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157803051|gb|ABV79774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii OSU
           85-389]
          Length = 446

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 34/141 (24%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRI--LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           D + +     L      YP      + +   C  +C FC     V         S++ E 
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGASSFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185

Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
                    +  +V+ +G   ++L            S  +   L  +++ L  I +++ L
Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKTSDDKVFTLADLIRHLVKIPNLERL 239

Query: 179 RFHSRVPIVDPQRINPELIQC 199
           R+ +  PI     +  +LI  
Sbjct: 240 RYTTSHPID----MTDDLISL 256


>gi|284162386|ref|YP_003401009.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Archaeoglobus profundus DSM 5631]
 gi|284012383|gb|ADB58336.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Archaeoglobus profundus DSM 5631]
          Length = 234

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 5/68 (7%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            CP  C +C    +   + G  ++ ++       I+E   I  V  TGG+PL+ +   L 
Sbjct: 26  GCPFRCPYCQNYRLF--EGGVEVTPEEIAKK---IRENYLIEGVCLTGGEPLVQNLDELT 80

Query: 164 KVLKTLRY 171
           K+++ L+ 
Sbjct: 81  KLIELLKE 88


>gi|239831834|ref|ZP_04680163.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum
           intermedium LMG 3301]
 gi|239824101|gb|EEQ95669.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum
           intermedium LMG 3301]
          Length = 369

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 31/167 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +           + ++  TGG+PL+  
Sbjct: 54  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCTAFI-DKGVRKLRLTGGEPLV-- 110

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI- 211
            K +  +++ L        +  + +    S++      R   EL +C       V +   
Sbjct: 111 RKNIMHLIRQLSRHLKSGALDELTLTTNGSQL-----SRFADELAEC-GIRRINVSLDTL 164

Query: 212 -----HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248
                H     + +        +  I     AGI +   +V LK  N
Sbjct: 165 DPEKFH-----QITRWGDLPRVLEGIEAAQRAGIRVKINAVALKDFN 206


>gi|159037574|ref|YP_001536827.1| radical SAM domain-containing protein [Salinispora arenicola
           CNS-205]
 gi|157916409|gb|ABV97836.1| Radical SAM domain protein [Salinispora arenicola CNS-205]
          Length = 601

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 11/106 (10%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
           P+  ++  P+          IL      C + C +C+ +    +  G  LS+       A
Sbjct: 4   PLFADDRRPV--------SVILKLRGETCNIDCLYCYEKRK-EAPGGARLSADGAAQLTA 54

Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
               +     V   GG+PL +      ++L  L    +V  +   S
Sbjct: 55  IFGARPV--AVELHGGEPLTIGRAAFAEILDRLAAQPNVVRVSMQS 98


>gi|148643115|ref|YP_001273628.1| coenzyme PQQ synthesis protein [Methanobrevibacter smithii ATCC
           35061]
 gi|148552132|gb|ABQ87260.1| coenzyme PQQ synthesis protein, SAM family [Methanobrevibacter
           smithii ATCC 35061]
          Length = 232

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 11/120 (9%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            R +      C + C +C   +    + G +++  D  AA+  ++       + FTGG+P
Sbjct: 21  QRQIFVRFAGCNLNCSYCDTNDSKSEKSGKLMTVDDVLAAIENVR-TPDCHVISFTGGEP 79

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
            +       + +  +     ++IL          P++I  + I+ L      + +  H N
Sbjct: 80  SLYP-----EFINEVARQTDLKIL---LETNGTLPEKI--DFIEKLDIVSLDIKLPEHFN 129


>gi|89896265|ref|YP_519752.1| hypothetical protein DSY3519 [Desulfitobacterium hafniense Y51]
 gi|89335713|dbj|BAE85308.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 441

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 28/212 (13%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFT 150
           R P  + +++   C + C  CF             S +       YI +  +    +  T
Sbjct: 94  RQPTLVEIEVTEGCNLRCPVCF-MAANDFHPDPNPSLEALGEKYRYILRHTNSDTSIQLT 152

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P   + + L  +++  R I   Q +  ++   ++   R NP+ +Q L EAG    I 
Sbjct: 153 GGEP--TTREDLADIIRLGREIG-FQAIEVNTNGVVI--GR-NPDYLQKLAEAGVS-GIY 205

Query: 211 IHAN----HPYE------FSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILA-NL 257
           +  +      YE           + AI+    AG+ ++    +++GIN+    E+L   L
Sbjct: 206 LQFDGLTGEVYEQIRGENLLPAKLKAIANCREAGVQVVLAMTVIEGINEKQLGEVLKFAL 265

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
               V + I     +    A G+  F + + +
Sbjct: 266 ANKDVIVGIA----YQ--PAFGSGRFDVPLSK 291


>gi|284163849|ref|YP_003402128.1| MiaB-like tRNA modifying enzyme [Haloterrigena turkmenica DSM 5511]
 gi|284013504|gb|ADB59455.1| MiaB-like tRNA modifying enzyme [Haloterrigena turkmenica DSM 5511]
          Length = 417

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 7/88 (7%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           +L +   C   C +C  +     +  +    ++ E A A I   +   E+  TG D  + 
Sbjct: 126 ILPIARGCMSDCSYCITK-QATGKIDSPPIEENVEKARALI--HAGAKEIRITGQDTGVY 182

Query: 158 SHK----RLQKVLKTLRYIKHVQILRFH 181
                  +L ++L  +  I+    +R  
Sbjct: 183 GWDEGERKLHRLLSEICAIEGDFRVRVG 210


>gi|218290137|ref|ZP_03494299.1| RNA modification enzyme, MiaB family [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239846|gb|EED07035.1| RNA modification enzyme, MiaB family [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 497

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 12/143 (8%)

Query: 73  EREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
           E  D   +     P    + +   R  + + + C  +C +C         + + L     
Sbjct: 180 EVWDNAPETVEDWPK---LRKDRVRAWVNVQYGCNKFCTYCI-VPYTRGVERSRLPEDVL 235

Query: 132 EAALAYIQE-KSQIWEVIFTGGDPLI-LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
              +  +QE    I  +     D  + L      ++L+ +  I  +  +RF +     +P
Sbjct: 236 REVVELVQEGYQDITLLGQNVNDYGVDLGTTNFARLLRQVNSIPGIGWIRFTTS----NP 291

Query: 190 QRINPELIQCLKEAGKPVYIAIH 212
                ELI  + E+ + V   IH
Sbjct: 292 WNFTDELIDAIAES-ENVVEHIH 313


>gi|167769534|ref|ZP_02441587.1| hypothetical protein ANACOL_00868 [Anaerotruncus colihominis DSM
           17241]
 gi|167668502|gb|EDS12632.1| hypothetical protein ANACOL_00868 [Anaerotruncus colihominis DSM
           17241]
          Length = 470

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 4/88 (4%)

Query: 91  HRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
             Y +RI+    L L + C   CR+C             LS +D    +  +Q+      
Sbjct: 78  RNYGNRIVMFAPLYLSNYCVNECRYCPYHHHNTHIARRQLSQEDIVREVVALQDMGHKRL 137

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH 174
            + TG DP+    + + + +KT+  IKH
Sbjct: 138 ALETGEDPVNCPIEYVLESIKTIYGIKH 165


>gi|170288910|ref|YP_001739148.1| radical SAM protein [Thermotoga sp. RQ2]
 gi|205829920|sp|B1LAW7|RLMN_THESQ RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|170176413|gb|ACB09465.1| radical SAM enzyme, Cfr family [Thermotoga sp. RQ2]
          Length = 343

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 81/214 (37%), Gaps = 45/214 (21%)

Query: 81  NNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFC-------FRREMVGSQKGTVLSSKDT 131
            + + ++ ++  +PDRI   +     CPV C FC        R    G     +LS +  
Sbjct: 85  EDGNTIESVMLFHPDRITACISTQVGCPVKCIFCATGMSGFVRNLTTGEIVAQILSMER- 143

Query: 132 EAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKV----LKTLRYIKHVQILRFHSRVPI 186
                  +EK +I  V++ G G+PL+     ++ +     K +  I  ++ +   +   +
Sbjct: 144 -------EEKKKIGNVVYMGMGEPLLNYENTIKSIRILNHKKMGNIG-IRRITIST---V 192

Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHP-----YEFSEEAIA-AISRL--------AN 232
             P RI       L E G  V +A+  + P      +        +I  +          
Sbjct: 193 GIPDRIIQ-----LAEEGLDVKLALSLHAPTNFKRDQLVPLNKKYSIEEILNAVKIYQRK 247

Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
            G  +  + VL++GIND+      L      ++I
Sbjct: 248 TGNRVTIEYVLIRGINDEISDAKKLAEILKNMKI 281


>gi|147919895|ref|YP_686354.1| putative molybdopterin biosynthesis protein A [uncultured
           methanogenic archaeon RC-I]
 gi|121685400|sp|Q0W3L5|MOAA_UNCMA RecName: Full=Probable molybdenum cofactor biosynthesis protein A
 gi|110621750|emb|CAJ37028.1| putative molybdopterin biosynthesis protein A [uncultured
           methanogenic archaeon RC-I]
          Length = 307

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 68/163 (41%), Gaps = 25/163 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + L + C + C +C      G +      + +  A +A I  +  + ++ F+GG+PL+  
Sbjct: 15  ISLTNRCNLKCIYC---HNEGEEDSGSEITVEEVAQIARICARYGVDKIKFSGGEPLLRR 71

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPY 217
                ++L+ L  ++ V +    +         +     + LKE+G   V +++ +    
Sbjct: 72  D--FDEILRALPPMRDVSVTTNGT---------LLAARAESLKESGLDRVNVSLDSMDRD 120

Query: 218 EFS---------EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
            F+         ++ +  I    + G+  +    V LKGIN+D
Sbjct: 121 RFTFITQCKGQFDKVLDGIDAALSVGLTPVKINMVYLKGINED 163


>gi|330810983|ref|YP_004355445.1| molybdenum cofactor biosynthesis protein A [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
 gi|327379091|gb|AEA70441.1| molybdenum cofactor biosynthesis protein A [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 322

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C +C    + +V +Q    LS++     +AY+ E + I  +  TGG+PL+
Sbjct: 15  ISLTSACNYACTYCVPDGKRLVAAQDE--LSAEAMARGVAYLIEAAGIERLRITGGEPLV 72

Query: 157 LSHKRLQKVLKTLRYI 172
               +L++ +  +  +
Sbjct: 73  SP--KLERFMTAVGQM 86


>gi|323188903|gb|EFZ74187.1| radical SAM superfamily protein [Escherichia coli RN587/1]
          Length = 419

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%)

Query: 94  PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
             R++   +  C  +C FC F +           +    ++ E  A + + + + I  V 
Sbjct: 30  RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVY 89

Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
           F GG P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 90  FGGGTPSALSAHDLARIINTLREKLPLAPDCEITIEGRVLNFDAERIDA 138


>gi|320014299|gb|ADV97870.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 326

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 60/162 (37%), Gaps = 19/162 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  VC   C +C           + LS  +               ++  TGG+P +  
Sbjct: 17  LSITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAFAL-LGTEKIRLTGGEPSMRR 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPY 217
                 ++ T+R    ++ L         +  R+  ++ Q  ++AG   + +++ +  P 
Sbjct: 76  D--FTDIIATIRQNPAIRTL-----AVTTNGYRLVRDVAQW-RDAGLTAINVSVDSMDPR 127

Query: 218 EFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
           +F          + +  I    +AG   +   +VL++ +ND 
Sbjct: 128 QFHAITGQDKFYQVMQGIDAAFDAGFDKVKVNAVLMRDVNDR 169


>gi|237747112|ref|ZP_04577592.1| ribonucleoside-triphosphate reductase [Oxalobacter formigenes
           HOxBLS]
 gi|229378463|gb|EEO28554.1| ribonucleoside-triphosphate reductase [Oxalobacter formigenes
           HOxBLS]
          Length = 227

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 7/67 (10%)

Query: 93  YPDRILLKLL-HVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIF 149
           +P R+   +    CP  CR+C  R  +   + G  L     +  LA+++ +  + E V+F
Sbjct: 22  FPGRLAAVVFCQGCPWRCRYCHNRHLLPTGEGGRYL----WQDVLAWLKTRQGLLEGVVF 77

Query: 150 TGGDPLI 156
           +GG+PL+
Sbjct: 78  SGGEPLL 84


>gi|187735295|ref|YP_001877407.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835]
 gi|187425347|gb|ACD04626.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835]
          Length = 353

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 6/65 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
           +  ++   C + CR C            +      E AL  I + +++    ++ TGGDP
Sbjct: 17  VFWEVTRACALACRHCRAVAQPRPHPDELTH----EEALRLIDQLAELRPPMLVLTGGDP 72

Query: 155 LILSH 159
           ++   
Sbjct: 73  VMRPD 77


>gi|73666881|ref|YP_302897.1| 2-methylthioadenine synthetase [Ehrlichia canis str. Jake]
 gi|123759460|sp|Q3YSK6|MIAB_EHRCJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|72394022|gb|AAZ68299.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ehrlichia canis str.
           Jake]
          Length = 441

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 31/142 (21%)

Query: 56  IARQFI----PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
           I +Q I    P   + + +P E      + +                + +   C  +C F
Sbjct: 118 IKKQVINIDFPVISKFDAIPVEEYTKNQETS--------------AFISVQEGCNKFCTF 163

Query: 112 CFRREMVGSQKGTVLSSKDTEAAL--AYIQEKSQIWEVIFTGGDP-LILSHKR-----LQ 163
           C     V         S+  EA    A +   S I E+   G +        +     L 
Sbjct: 164 C-----VVPYTRGEEYSRTVEAIFNEALVLADSGIKEITLIGQNVNAYHGTYKGCEWDLG 218

Query: 164 KVLKTLRYIKHVQILRFHSRVP 185
           K+++ +  I +++ +R+ +  P
Sbjct: 219 KLIQHIAKIPNIERIRYTTSHP 240


>gi|158522869|ref|YP_001530739.1| molybdenum cofactor biosynthesis protein A [Desulfococcus
           oleovorans Hxd3]
 gi|158511695|gb|ABW68662.1| molybdenum cofactor biosynthesis protein A [Desulfococcus
           oleovorans Hxd3]
          Length = 330

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 30/168 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQEKSQ--IWEVIFTGGD 153
           + +   C + C +C             L+  D    E  L+ I+  +   I +V  TGG+
Sbjct: 19  VSVTDRCNLNCIYCNPSRY-----AKKLAHSDILTYEELLSIIEAGAGLGITKVRITGGE 73

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+         + ++  I  +  L   +   +        +    L++AG    I I  
Sbjct: 74  PLVRKDA--CDFIGSVSAISGITDLSLTTNGVV------LADCAGRLRKAGVN-RINISL 124

Query: 214 NHPYE-----FSEEAI-----AAISRLANAGI-ILLSQSVLLKGINDD 250
           +          +           I     AG   +    V+++GINDD
Sbjct: 125 DTLDRRRFKTITGHDRFDRVWKGIQAALKAGFSPVKLNMVVMRGINDD 172


>gi|84687002|ref|ZP_01014885.1| radical SAM domain protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84664976|gb|EAQ11457.1| radical SAM domain protein [Rhodobacterales bacterium HTCC2654]
          Length = 315

 Score = 38.2 bits (88), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 1/86 (1%)

Query: 75  EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
           EDP    + SP   +   +P+ +      +C + C  C+      +     ++  +    
Sbjct: 14  EDPKVTADGSPRATVALTHPETLWFNTGTLCNITCEGCYIESSPTNDALAYMTRGEVAGY 73

Query: 135 LAYIQEKS-QIWEVIFTGGDPLILSH 159
           L  I+ +   + E+ FTGG+P +   
Sbjct: 74  LDQIKARGWPVTEIGFTGGEPFMNPD 99


>gi|158521211|ref|YP_001529081.1| radical SAM domain-containing protein [Desulfococcus oleovorans
           Hxd3]
 gi|158510037|gb|ABW67004.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3]
          Length = 306

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 25/179 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           +K  + C   C +C         K   ++  +    + +  +   + EV  +GG+P +  
Sbjct: 15  IKANYTCNSNCVYCCAGNR---GKQRAMTFDEIAENIQFFIDTYGVQEVCLSGGEPTVHR 71

Query: 159 H--KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA-N 214
                L  V    LR   H   +RFH R      Q         L      V  + H   
Sbjct: 72  DFLSTLDFVRSKGLRTYLHTNGIRFHDRT--FAKQ------CAALVNRTL-VGFSFHTPG 122

Query: 215 HPYEFSEEAI------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
              E +  A         I+ L    + L + +V++K        + +L+ +     ++
Sbjct: 123 LCAELTGSAKTFGQRIDGIANLLAESVPLRTNTVIIKQNYRHLPAIVDLISSL---GVR 178


>gi|94968118|ref|YP_590166.1| radical SAM family Fe-S protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550168|gb|ABF40092.1| Fe-S protein, radical SAM family [Candidatus Koribacter versatilis
           Ellin345]
          Length = 591

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 36/180 (20%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILS 158
             CP +C FC          G     ++ ++ +  I +  +         D    P+ L+
Sbjct: 234 RGCPKHCSFCSVWR----TDGQKPRQRNFQSVIEEIVDLRRRGFRFIALADDNFYPVTLT 289

Query: 159 HKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
             RL K     + LR ++ ++  RFH              L+  L    K +        
Sbjct: 290 DLRLAKAQNNTEKLRNLEQIREERFH--------------LMAQLARLPKDMVFFTQIT- 334

Query: 216 PYEFSEEAI--AAISRLANAGIILLSQSVL---LKGI----NDDPEILANLMRTFVELRI 266
             E +E+A    A+      G ++  ++V    LK +    N   + LA  ++ F    +
Sbjct: 335 -MEAAEDAAFLDAMRAANIKGALVGVEAVTPEGLKAVYKDFNYSGDRLAQQLQEFRRHGV 393


>gi|39997325|ref|NP_953276.1| radical SAM domain-containing protein [Geobacter sulfurreducens
           PCA]
 gi|39984216|gb|AAR35603.1| radical SAM domain protein [Geobacter sulfurreducens PCA]
 gi|307634986|gb|ADI84985.2| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter sulfurreducens KN400]
          Length = 342

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 69/189 (36%), Gaps = 29/189 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-L 157
                 CP  C FC +  + G   G + S+ +  +A+        +    + G      L
Sbjct: 10  FISHQGCPHRCVFCDQERIAGR-AGRLPSAAEIHSAVKTFGRGRPVEAAFYGGT--FTSL 66

Query: 158 SHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA 213
                +++L  L+ ++H   V+ +R  +R     P  ++ E    LK  G   V + + +
Sbjct: 67  PRNEQERLLAALQPLRHDGSVRSVRLSTR-----PDALDAETAGFLKSMGVASVELGVQS 121

Query: 214 NHPYEFS--------EEAIAAISRLANAGIILLSQ-SVLLKGINDDPE-ILANLMRTF-- 261
                           + + A   L + GI + +Q    L G  D  E  L +L R    
Sbjct: 122 MDDQVLDVSGRGHSAADTVRAFDVLRSEGIAVGAQLMPGLPG--DSRERSLDSLTRILDL 179

Query: 262 --VELRIKP 268
             V LRI P
Sbjct: 180 KPVSLRIYP 188


>gi|327398449|ref|YP_004339318.1| Radical SAM domain-containing protein [Hippea maritima DSM 10411]
 gi|327181078|gb|AEA33259.1| Radical SAM domain protein [Hippea maritima DSM 10411]
          Length = 351

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 33/210 (15%), Positives = 69/210 (32%), Gaps = 36/210 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
            ++   C + C  C     +  +    LS +D    +  I E+ +   V+ TGG+PL   
Sbjct: 10  FEITPRCNLNCIHCRTSASMNLED--RLSFEDITNIIEEISEQFKP-VVVLTGGEPL--- 63

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218
              L++ +  +    H + +R        +   I+  L   +K+    V +++  +   E
Sbjct: 64  ---LREDVFDIADFIHSKGMRVG---LATNGTLIDEGLALKIKKHIDIVSLSLDGSTA-E 116

Query: 219 FSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
             ++             A + L    +  +  S   K    D E    L +       K 
Sbjct: 117 VHDDFRKVKGAFDATVRAANILRETSVEFIINSSFTKRNQSDIENTYRLAKFL---GAKA 173

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298
           +Y+             +     ++I   L 
Sbjct: 174 WYMFM----------IVPTGRAEEIREELI 193


>gi|302342465|ref|YP_003806994.1| radical SAM domain protein [Desulfarculus baarsii DSM 2075]
 gi|301639078|gb|ADK84400.1| Radical SAM domain protein [Desulfarculus baarsii DSM 2075]
          Length = 414

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 10/84 (11%)

Query: 95  DRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEV 147
           + ++L +   C   C +C   +R    G   G  ++ +D    + Y++E        +  
Sbjct: 3   NHVVLDISGKCNARCTWCVTGYRNRQ-GVAYGRYMTPQDVAKVIDYLREQRIITPDAYFF 61

Query: 148 IFTGGDPLILSHKRLQKVLKTLRY 171
           ++  G+PLI  +    ++++ L  
Sbjct: 62  LYNWGEPLI--NPHFAEIVEELNR 83


>gi|260910078|ref|ZP_05916759.1| BchE/P-methylase [Prevotella sp. oral taxon 472 str. F0295]
 gi|260635790|gb|EEX53799.1| BchE/P-methylase [Prevotella sp. oral taxon 472 str. F0295]
          Length = 456

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 46/211 (21%), Positives = 79/211 (37%), Gaps = 37/211 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   CP +C FC++      + G    +   +AAL  I         ++   D L+ S
Sbjct: 168 LVVSRGCPHHCDFCYKDAFY--EGGKSFYTARVDAALKEIDALPGRH--LYFLDDHLLGS 223

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP-ELIQCLKEAG-KPVYIAIHA--- 213
            +   ++ + ++ +  V    F S   +   Q I   +LI+   EAG + V+I       
Sbjct: 224 KRFAAELFEGMKGMNRV----FQSAATV---QSILEGDLIEKAAEAGMRSVFIGFETFSP 276

Query: 214 ------NHPYEFSEEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRTFVELRI 266
                 N       +  AA+ RL + GI++    V  L    DD ++     R  V+  +
Sbjct: 277 ENLKASNKCQNLQRDYSAAVKRLHSLGIMINGSFVFGLDH--DDADV----FRRTVDWGV 330

Query: 267 KP------YYLHHPDLAAGTSHFRLTIEEGQ 291
                   Y  H      GT  F+    EG+
Sbjct: 331 DNAITTATY--HILTPYPGTRQFKRMEAEGR 359


>gi|148263280|ref|YP_001229986.1| radical SAM domain-containing protein [Geobacter uraniireducens
           Rf4]
 gi|146396780|gb|ABQ25413.1| Radical SAM domain protein [Geobacter uraniireducens Rf4]
          Length = 288

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 64/199 (32%), Gaps = 40/199 (20%)

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYI 138
           P  G  H    R+ L +   C + C +C RR         G     +   +        +
Sbjct: 15  PCFGGNHHKNGRMHLAVAPRCNIKCGYCSRRHDCANESRPGVTSRLLTPQEAIVKVREVV 74

Query: 139 QEK---SQIWEVIFTG-GDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI 192
                   I  +   G GDPL  + +  +     L      H+      +   +  P++I
Sbjct: 75  ASDILGPIIKVIGIAGPGDPL-ANEETFETF--RLIGAEFPHLIKC-MSTNGLL-LPEKI 129

Query: 193 NPELIQCLKEAGKPVYIAI-----------HAN-HPYEFS-EEAIA-----AISRLANA- 233
             +L+Q L      V I             H   H  + +  EA        +  L  A 
Sbjct: 130 --DLLQELDLHSLTVTINALDPRVGAKIYSHILYHGKKLTGTEAAEILIANQLEGLRRAA 187

Query: 234 --GIILLSQSVLLKGINDD 250
             G+ +   +V + G+N+D
Sbjct: 188 AYGMTIKVNTVYIPGVNED 206


>gi|320451516|ref|YP_004203612.1| radical SAM enzyme, Cfr family [Thermus scotoductus SA-01]
 gi|320151685|gb|ADW23063.1| radical SAM enzyme, Cfr family [Thermus scotoductus SA-01]
          Length = 349

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 43/202 (21%), Positives = 68/202 (33%), Gaps = 49/202 (24%)

Query: 93  YPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIW 145
           Y +R  + L  +  CP  C FC    +     G  L++ +  + L  I          I 
Sbjct: 89  YENRKTVCLSSMVGCPAGCTFCATGAL---GFGRNLTAAEILSQLLAIAHHQGISPRDIR 145

Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN----------- 193
            V+  G G+PL+     L  VLK +R +        H +   + P+RI            
Sbjct: 146 NVVLMGMGEPLL----NLGNVLKAIRTM-------LHPKGLAMSPRRITLSTVGIPKGIH 194

Query: 194 ----PELIQCLK--------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241
                +L   L         E  + +    H     E  E      +R         +  
Sbjct: 195 RLAEEDLGVRLALSLHAPDDETRRKIIPTAHRYSVGEILEAVRHYYARTKRRVTFEYT-- 252

Query: 242 VLLKGINDDPEILANLMRTFVE 263
            LLKG+ND P   A L+   ++
Sbjct: 253 -LLKGLNDHP-WQARLLAKLLK 272


>gi|310828575|ref|YP_003960932.1| Radical SAM domain protein [Eubacterium limosum KIST612]
 gi|308740309|gb|ADO37969.1| Radical SAM domain protein [Eubacterium limosum KIST612]
          Length = 294

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 75/231 (32%), Gaps = 69/231 (29%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK---SQIWEVIFTGG--D 153
           + +   C   C +C  R             K  + AL  I       +   V+ TG   D
Sbjct: 25  MNIYRGCCHGCIYCDSRSECYQNTDFDTVKKK-QDALRLIARDLKSKKKKGVVGTGAMSD 83

Query: 154 PLILSHKRLQKVL-KTLRYIKH-----------------VQIL-RFHSRVPIVDPQRIN- 193
           P     +R +++  + L+ I H                 + +L R  S  P++    I  
Sbjct: 84  PYN-PFERKERLTREALKLIDHYGFGVAIATKGSLVTRDIDLLSRIQSHSPVICKVTITA 142

Query: 194 -PELIQCLKEAGKPVYIAIHANHPYEFSEEAI--AAISRLANAGI---ILLSQSVLLKGI 247
             + +  + E G P                +    A+  L++AGI   ILL    +L  I
Sbjct: 143 ADDALSGIVEPGAP--------------PSSKRFEAVKALSDAGIYIGILL--MPILPFI 186

Query: 248 NDDPEILANLMRTFVELRIK---P------------YYLHHPDLAAGTSHF 283
            D+ + + +++    +   +   P            YY +  D      HF
Sbjct: 187 EDNTDNIQSIVEQGAKCGARFIYPGFGVTLRDVQRDYYFNQLD-----QHF 232


>gi|239625448|ref|ZP_04668479.1| radical SAM domain-containing protein [Clostridiales bacterium
           1_7_47_FAA]
 gi|239519678|gb|EEQ59544.1| radical SAM domain-containing protein [Clostridiales bacterium
           1_7_47FAA]
          Length = 385

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 11/80 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + + + C   C  C R            S  + E ++  I++  Q++    TGG+P I +
Sbjct: 5   VIVTYRCNARCSMCNRY--------KAPSKPEEEISIETIRKLPQMYFTNITGGEPFIRT 56

Query: 159 HKRLQKVLKTLRYIKHVQIL 178
              L+ +++ L  IK  +I+
Sbjct: 57  D--LKDIVRELY-IKSDRIV 73


>gi|317475092|ref|ZP_07934360.1| radical SAM superfamily protein [Bacteroides eggerthii 1_2_48FAA]
 gi|316908736|gb|EFV30422.1| radical SAM superfamily protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 234

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
            Y   + +++   C + C  C R    G  +   +  K     L +++    I     TG
Sbjct: 4   LYIKNLCIEITRRCNMRCTHCMR----GDAESVDIPLKHISNLLRHVRH---IHHFNITG 56

Query: 152 GDPLILSHKRLQKVLKTLRY 171
           G+P  L+ + ++ +L+ +R 
Sbjct: 57  GEP-SLNVRAIRHILERVRA 75


>gi|124006098|ref|ZP_01690934.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
 gi|123988275|gb|EAY27928.1| conserved hypothetical protein [Microscilla marina ATCC 23134]
          Length = 438

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 34/175 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C   C FC      G  K    S ++  A+   I +  ++ EV+ TG  
Sbjct: 140 RTRTFLKVQDGCNYNCSFCTIPLARG--KSRSDSIENIIASAHKIGQT-EVKEVVLTG-- 194

Query: 154 PLILSH---------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            + +           +R   ++K L  +  ++ +R  S    ++P  ++ ++I    ++ 
Sbjct: 195 -VNIGDFGIQEGRRKERFIDLVKALDEVDGLERIRISS----IEPNLLSNDVIAFTAQSK 249

Query: 205 KPVYIAIHANHP-YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
           +      H + P    S + + A+ R    G+ +           D    +  LM
Sbjct: 250 R---FVPHFHIPLQSGSNKILKAMRRRYERGLYV-----------DRVNKIKELM 290


>gi|52079259|ref|YP_078050.1| hypothetical protein BL03114 [Bacillus licheniformis ATCC 14580]
 gi|52784624|ref|YP_090453.1| hypothetical protein BLi00825 [Bacillus licheniformis ATCC 14580]
 gi|52002470|gb|AAU22412.1| conserved protein YfkA [Bacillus licheniformis ATCC 14580]
 gi|52347126|gb|AAU39760.1| putative protein [Bacillus licheniformis ATCC 14580]
          Length = 373

 Score = 38.2 bits (88), Expect = 2.1,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 16/123 (13%)

Query: 58  RQFIPQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
            Q  P   E +      + D  GD   + ++                +C + C  C    
Sbjct: 5   MQARPITPEYDPWEAYMDVDQFGDIQLTNVE-----------FTTTTLCNMRCEHCAVGY 53

Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
            + ++    L        L  I    ++  +  TGG+P +LS K +++ +  L    H +
Sbjct: 54  TLQTKDPDALPVSLLLKRLDEI---PRLRSLSITGGEP-MLSLKSVKEYVVPLLKYAHER 109

Query: 177 ILR 179
            +R
Sbjct: 110 GVR 112


>gi|332796946|ref|YP_004458446.1| radical SAM domain-containing protein [Acidianus hospitalis W1]
 gi|332694681|gb|AEE94148.1| radical SAM domain protein [Acidianus hospitalis W1]
          Length = 322

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P     K+   C ++C FC       + +    S++  +  +  ++  S I  + F GG+
Sbjct: 23  PGYATFKVTSRCNLHCTFC--NPEYYNGELGEGSTETIKKIIDNLR-DSSIVVLSFEGGE 79

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           P I         +  L    H         +   +  R+N +  + L +    +   +H 
Sbjct: 80  PTIRKD------ILELLEYAHDGSFYV---MLTTNGYRLNDD--EFLTKLADRIDF-LHY 127

Query: 214 N----HPYEFSEEAIAAISRL---ANAGIILLSQSVLLKG 246
           +    H        + A+  L      GI +  Q+V+ + 
Sbjct: 128 SIDEYHWN------VKALDTLCRFRQYGIKVNVQTVVTRY 161


>gi|294852307|ref|ZP_06792980.1| molybdenum cofactor biosynthesis protein A [Brucella sp. NVSL
           07-0026]
 gi|294820896|gb|EFG37895.1| molybdenum cofactor biosynthesis protein A [Brucella sp. NVSL
           07-0026]
          Length = 329

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 14  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 70

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            K +  ++  L        +  + +    S++      R   EL  C     + + +++ 
Sbjct: 71  RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 122

Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
             +P +F               I     AGI +   +V LK  ND
Sbjct: 123 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 167


>gi|228920856|ref|ZP_04084195.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228838787|gb|EEM84089.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 337

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 68/167 (40%), Gaps = 24/167 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++  C   C +C   E+ G       +  +L+  + E           + ++  TGG+
Sbjct: 18  ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211
           PL+     L +++  L  ++ ++ +   +    +  Q       + LK+AG K V I++ 
Sbjct: 77  PLLRKD--LPQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKALKDAGLKRVNISLD 128

Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
               H     N     ++  +  I+    AG+ +    V+ KG+ND 
Sbjct: 129 AIEDHVFKKINGRNVSTKPVLKGIAAAKAAGLEVKVNMVVKKGMNDS 175


>gi|149920929|ref|ZP_01909390.1| coproporphyrinogen III oxidase [Plesiocystis pacifica SIR-1]
 gi|149818201|gb|EDM77656.1| coproporphyrinogen III oxidase [Plesiocystis pacifica SIR-1]
          Length = 471

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 59/172 (34%), Gaps = 34/172 (19%)

Query: 94  PDRILLKLLHV--CPVYCRFC---FRREMVGSQKGTVLSS--KDTEAALAYI---QEKSQ 143
             R L   +HV  C V C FC    ++          LS+  +  +A    +   Q  + 
Sbjct: 68  DRRALFVYVHVPFCAVRCGFCNLFTQKHPPEELPARWLSTLFEQMDAVAEAVGVGQADTG 127

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELI 197
                  GG P  L    L+ +L  LR        RF   +P         P+    + +
Sbjct: 128 FARWALGGGTPTFLEAGALEALLVRLRE-------RFGVDLPTTPSSVETSPETCTDDRL 180

Query: 198 QCLKEAG-KPVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLS 239
             L+ AG + + I +             P   +  A+AA+ R+      +L+
Sbjct: 181 AVLEAAGTRRISIGVQSFAEASLRAVGRPQ-AAPLAVAALDRIRARSFPILN 231


>gi|53804481|ref|YP_113916.1| tRNA-i(6)A37 modification enzyme MiaB [Methylococcus capsulatus
           str. Bath]
 gi|81682096|sp|Q608N1|MIAB_METCA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|53758242|gb|AAU92533.1| tRNA-i(6)A37 modification enzyme MiaB [Methylococcus capsulatus
           str. Bath]
          Length = 458

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 25/129 (19%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG-- 151
           +  + ++  C  YC FC     V         S+  +  +A I   ++  + EV   G  
Sbjct: 148 KAFVSVMEGCGKYCTFC-----VVPYTRGEEISRPVDDVIAEIVALAEQGVREVNLLGQN 202

Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
                    D  +     L   +  +  I     +RF +  P+      +  LI+  ++ 
Sbjct: 203 VNAYRGVLADGGMADLALLMHYVAAVDGID---RIRFTTSHPV----EFSDALIEAFRDI 255

Query: 204 GKPVYIAIH 212
              +   +H
Sbjct: 256 P-QLVSHLH 263


>gi|319789539|ref|YP_004151172.1| MiaB-like tRNA modifying enzyme [Thermovibrio ammonificans HB-1]
 gi|317114041|gb|ADU96531.1| MiaB-like tRNA modifying enzyme [Thermovibrio ammonificans HB-1]
          Length = 441

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 16/126 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTG 151
             R  +K+   C ++C +C   +  G            + AL+ I+   +    E++ TG
Sbjct: 142 RTRAFVKVQQGCQLFCTYCIIPKARGPMVSLPP-----QEALSQIKRLVEAGYKEIVLTG 196

Query: 152 GDPLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                   +     L ++++    I  +  LR  S    V+P    P LI+ +  + K V
Sbjct: 197 THLGAYGREFEGWSLARLVEEAVKIPGLYRLRLSS----VEPVEFTPHLIEVITGSEK-V 251

Query: 208 YIAIHA 213
               H 
Sbjct: 252 APHYHV 257


>gi|229592098|ref|YP_002874217.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas
           fluorescens SBW25]
 gi|229363964|emb|CAY51493.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas
           fluorescens SBW25]
          Length = 322

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 20/160 (12%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C +C    + +V +Q    LS++     + Y+ E + I  +  TGG+PL+
Sbjct: 15  ISLTSACNYACTYCVPNGKRLVAAQDE--LSAEAMARGVEYLIEAAGIDRLRITGGEPLV 72

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
               +L+  +  +  +  +  +         + Q +  +L   ++   K + +++    P
Sbjct: 73  SP--KLEAFMGAVGQMG-LSDI-----SLTTNGQLLARKLPLLVEAGIKRINVSLDTLDP 124

Query: 217 YEFSEEAI--------AAISRLANAGIILLSQSVLLKGIN 248
             F   A           + +   AGI +    V L+G N
Sbjct: 125 DAFRSIARGGDLATVLDGMDQARAAGIKIKVNMVPLRGQN 164


>gi|188585891|ref|YP_001917436.1| molybdenum cofactor biosynthesis protein A [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179350578|gb|ACB84848.1| molybdenum cofactor biosynthesis protein A [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 336

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 4/85 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C     V       +L+ +D E  +        + ++ FTGG+PL+ 
Sbjct: 21  ISVTDRCNLRCFYCMPTSGVEKMSHPQILNFEDIERIVTA-AANLGVSKIRFTGGEPLVR 79

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182
                 K++ T+  I  ++ L   +
Sbjct: 80  KD--FSKLVNTISRIPGIEDLSLTT 102


>gi|50085046|ref|YP_046556.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ADP1]
 gi|49531022|emb|CAG68734.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ADP1]
          Length = 335

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 25/172 (14%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-----ALAYIQEKSQIWE 146
           RY  ++ + +   C   C +C        +    +  KD               ++ I +
Sbjct: 12  RYKRKLRISVTDRCNFKCMYCM------PEHPEWIKKKDLLDFEALYLFCEFMVQNGIQK 65

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205
           +  TGG+PL+   + +   ++ L+ ++ + + R      +        +    LK+AG  
Sbjct: 66  IRITGGEPLM--RQGVVHFVRDLQKLRSIGLKRIS----MTTNAHYLAKYAYDLKQAGLD 119

Query: 206 PVYIAIHANHPYEFSEEAIAA-------ISRLANAGIILLSQSVLLKGINDD 250
            + I++ +    +F +    +       I      G+     +VL+KG NDD
Sbjct: 120 DLNISLDSLDAQQFLKLTKKSIEPVLQGIQAAQLVGLPFKINTVLMKGKNDD 171


>gi|237720682|ref|ZP_04551163.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229449517|gb|EEO55308.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 436

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 69/227 (30%), Gaps = 71/227 (31%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G         ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--HHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G D      + L ++++ +  I  V+ +R H       P     +L + ++E        
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
                           +                L+ I+D+   +  LMR           
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLQLMRRQ--------- 267

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
                         ++ E+  +++   ++++ G+  +   ++  PG 
Sbjct: 268 --------------VSKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE 300


>gi|121997684|ref|YP_001002471.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halorhodospira halophila
           SL1]
 gi|229890553|sp|A1WVF7|MIAB_HALHL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|121589089|gb|ABM61669.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halorhodospira halophila
           SL1]
          Length = 474

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 16/118 (13%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
              + ++  C  YC FC      G +    ++  D  A +  + E+  + EV   G +  
Sbjct: 166 TAYVSVMEGCSKYCSFCVVPYTRGDEISRPVA--DVLAEVRSLAEQ-GVREVNLLGQNVN 222

Query: 154 --PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPI------VDPQRINPELIQCL 200
                L       L  +++ +  I  +  +RF +  P       +D  R  PEL   L
Sbjct: 223 AYAGALDDGERADLGLLIEAVARIPGIDRIRFTTSHPAEFHSGLIDAYRDVPELADFL 280


>gi|300867546|ref|ZP_07112196.1| Ribosomal protein S12 methylthiotransferase rimO [Oscillatoria sp.
           PCC 6506]
 gi|300334434|emb|CBN57366.1| Ribosomal protein S12 methylthiotransferase rimO [Oscillatoria sp.
           PCC 6506]
          Length = 439

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 35/170 (20%)

Query: 92  RYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           RY         L++   C   C FC    + G+Q+   +  +   A    +  +     +
Sbjct: 137 RYRTTPEAVAYLRIAEGCDYRCAFCIIPHLRGNQRSRTI--ESIVAEAEQLAAEGVKEII 194

Query: 148 IFT------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
           + +      G D  I    +L ++L  L  +  +  +R H   P        P+++  ++
Sbjct: 195 LISQITTNYGKD--IYGEPKLAELLHALGKVD-IPWIRMHYAYPTGL----TPKVMAAIQ 247

Query: 202 EAGKPV-YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           E    + Y+ +   H +    E + A++R                G+ND 
Sbjct: 248 ETPNILPYLDLPLQHSH---PEILRAMNR------------PFQAGVNDS 282


>gi|294794074|ref|ZP_06759211.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 3_1_44]
 gi|294455644|gb|EFG24016.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 3_1_44]
          Length = 325

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L L   C   C +C   E+    +  +LS  +    L        +  V  TGG+PL+
Sbjct: 16  VRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMNILGAF-HHIGVKAVRLTGGEPLL 74

Query: 157 LSHKRLQKVLKTLRY 171
                ++++L  ++ 
Sbjct: 75  YP--HIEELLGRIKE 87


>gi|284048541|ref|YP_003398880.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Acidaminococcus fermentans DSM 20731]
 gi|283952762|gb|ADB47565.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Acidaminococcus fermentans DSM 20731]
          Length = 236

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)

Query: 93  YPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150
           YP ++   L    C + C +C   E++  +    + S+D E  +AY+  +  I + V+ +
Sbjct: 14  YPGKVACTLFTGGCNLRCPYCHNSELLEGE----MPSQDMEEVMAYLDVRKGILDGVVIS 69

Query: 151 GGDPLILSHKRLQKVLKTLRY 171
           GG+P + S   L   L  L+ 
Sbjct: 70  GGEPCLQSD--LVPFLARLKE 88


>gi|15644025|ref|NP_229074.1| biotin synthase [Thermotoga maritima MSB8]
 gi|4981826|gb|AAD36344.1|AE001782_5 biotin synthetase, putative [Thermotoga maritima MSB8]
          Length = 348

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 35/89 (39%), Gaps = 6/89 (6%)

Query: 89  IVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           I  +Y       R +++  +VC   C +C  R    + K   ++ ++         +   
Sbjct: 42  IRRKYVGDEVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGA 101

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
              V+ +G DP  +    +  ++K ++ +
Sbjct: 102 KTIVLQSGEDPYYMPD-VISDIVKEIKKM 129


>gi|307721435|ref|YP_003892575.1| Radical SAM domain-containing protein [Sulfurimonas autotrophica
           DSM 16294]
 gi|306979528|gb|ADN09563.1| Radical SAM domain protein [Sulfurimonas autotrophica DSM 16294]
          Length = 347

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 10/87 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           +   +VC   C+FC       +     ++ +D    +A +         I +  +P    
Sbjct: 47  INPTNVCADVCKFCAYSATRKNPNQYTMTHEDIMKIVAEVDAHGAKEVHIVSAHNP---- 102

Query: 159 HKRLQKVLKTLRYIK------HVQILR 179
           +  L   L   + IK      HV+ L 
Sbjct: 103 NVTLDWYLGIFKKIKTAYPHLHVKALT 129


>gi|169335088|ref|ZP_02862281.1| hypothetical protein ANASTE_01495 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257826|gb|EDS71792.1| hypothetical protein ANASTE_01495 [Anaerofustis stercorihominis DSM
           17244]
          Length = 309

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 31/206 (15%), Positives = 63/206 (30%), Gaps = 47/206 (22%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY--------CRFCFRREMV 118
            N  P    D +    ++       +   ++ L     CP          C FC +    
Sbjct: 4   WNGKPYYSLDYMLKERYN-------KKIYKVALNGGMTCPNRDGKIDTRGCIFCSK---- 52

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD---PL------ILSHKRLQKVLKTL 169
           G       + K  +     I  +++I        +                 L+K+    
Sbjct: 53  GGSGD--FAGKGIDDITTQINNQAEILREKTNASNFIAYFQAYTNTYAPTDYLRKIYTEA 110

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEE----- 222
               ++  L   +R     P  ++ E +  L+E    KP++I +      E + E     
Sbjct: 111 LSHPNIVALSIATR-----PDCLDKEALDLLEELNNIKPIWIELGLQTINEKTAEYIRRG 165

Query: 223 -----AIAAISRLANAGIILLSQSVL 243
                  +A+  L   GI ++  ++L
Sbjct: 166 YPLSCFDSAVKELRKRGIEVIVHTIL 191


>gi|21230455|ref|NP_636372.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66769551|ref|YP_244313.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
           pv. campestris str. 8004]
 gi|24211977|sp|Q8PBX1|MOAA_XANCP RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|81304494|sp|Q4URN0|MOAA_XANC8 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|21112018|gb|AAM40296.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66574883|gb|AAY50293.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
           pv. campestris str. 8004]
          Length = 339

 Score = 38.2 bits (88), Expect = 2.2,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 15/113 (13%)

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125
           LP+    P+ D    PL+ +         L ++  C   C +C   + V    G      
Sbjct: 2   LPDLSAAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGLDADQR 53

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           LS    E  +        + ++  TGG+PL+   K L  +++ L  I+ ++ L
Sbjct: 54  LSFDQLETLVRAFVA-VGVTKLRLTGGEPLL--RKNLPVLIQRLAAIEGIEDL 103


>gi|326408980|gb|ADZ66045.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis
           M28]
 gi|326538693|gb|ADZ86908.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis
           M5-90]
          Length = 329

 Score = 38.2 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 14  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 70

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            K +  ++  L        +  + +    S++      R   EL  C     + + +++ 
Sbjct: 71  RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 122

Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
             +P +F               I     AGI +   +V LK  ND
Sbjct: 123 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 167


>gi|284161837|ref|YP_003400460.1| radical SAM protein [Archaeoglobus profundus DSM 5631]
 gi|284011834|gb|ADB57787.1| Radical SAM domain protein [Archaeoglobus profundus DSM 5631]
          Length = 375

 Score = 38.2 bits (88), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 7/76 (9%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTG 151
            P  +  ++   C + C+ C       +Q     +  + E     I +  +   ++  TG
Sbjct: 6   KPFIVFWEVTRACLLACKHC----RAKAQTKPHPNELNLEECYDLIDQLKKWNPLLIITG 61

Query: 152 GDPLILSHKRLQKVLK 167
           GDPL+     L  +L+
Sbjct: 62  GDPLMRKD--LFDILE 75


>gi|309389586|gb|ADO77466.1| Radical SAM domain protein [Halanaerobium praevalens DSM 2228]
          Length = 330

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
            + C + C  C+R    G   GT L++ + +  L  I+  +    +IF+GG+PL+     
Sbjct: 9   TNKCNLSCPHCYRNA--GEDLGTELNTNEAKKMLDQIKA-ANFHLMIFSGGEPLLRDD-- 63

Query: 162 LQKVLKTLRYI 172
           + +++     I
Sbjct: 64  IFELMAYASAI 74


>gi|295115538|emb|CBL36385.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium
           SM4/1]
          Length = 443

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 17/119 (14%)

Query: 94  PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAY-------IQEKS 142
             R  +K+      +C +C     R  +       V+   +  AA  Y       I   S
Sbjct: 142 HTRAFIKVQDGYNQFCSYCIIPYTRGRVRSRPMEDVVQEVEALAASGYKEIVLTGIHLSS 201

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
              +   T  +P   +   L  ++  L  I  ++ +R  S    ++P+ I  E  + L 
Sbjct: 202 YGADFKRTAENPEAAAD--LLSLIVRLDRIPGIERIRLGS----LEPRIITDEFAETLA 254


>gi|291549884|emb|CBL26146.1| GTP cyclohydrolase subunit MoaA [Ruminococcus torques L2-14]
          Length = 329

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 4/85 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E +       +L+  + E     I  +  I ++  TGG+PL+ 
Sbjct: 14  ISVTDRCNLRCVYCMPEEGIEQLPHEQILTFDEIERVCR-ISTELGISKIKLTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182
             K L  +L  ++ I  ++ +   +
Sbjct: 72  -RKGLPDLLGKIKRIPGIEQVTLTT 95


>gi|317051924|ref|YP_004113040.1| Radical SAM domain-containing protein [Desulfurispirillum indicum
           S5]
 gi|316947008|gb|ADU66484.1| Radical SAM domain protein [Desulfurispirillum indicum S5]
          Length = 291

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 13/89 (14%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVIFT 150
           ++ ++ H C    C FC      G         K  E  L  IQ         +  V   
Sbjct: 18  LIFQITHGCSHNACTFC------GMYTDKRFRMKPLETVLEEIQNIPAAYAATVRRVFLA 71

Query: 151 GGDPLILSHKRLQKVLKTL-RYIKHVQIL 178
            GD  I   ++L  +L  L  +   +Q +
Sbjct: 72  DGDATIYPTEKLTPILDALNAHFPALQRI 100


>gi|281412936|ref|YP_003347015.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
 gi|281374039|gb|ADA67601.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10]
          Length = 348

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R +++  +VC   C +C  R    + K   ++ ++         +      V+ +G DP 
Sbjct: 54  RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY 113

Query: 156 ILSHKRLQKVLKTLRYI 172
            +    +  +++ ++ +
Sbjct: 114 YMPD-VISDIVREIKKM 129


>gi|254293796|ref|YP_003059819.1| molybdenum cofactor biosynthesis protein A [Hirschia baltica ATCC
           49814]
 gi|254042327|gb|ACT59122.1| molybdenum cofactor biosynthesis protein A [Hirschia baltica ATCC
           49814]
          Length = 359

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C + C +C    M    K  VLS ++    +     +  I ++  TGG+PL+  
Sbjct: 46  LSITDRCDLRCTYCMPERMQFLPKSDVLSFEELTRLVDAFIAR-GITKLRVTGGEPLVRK 104

Query: 159 H--KRLQKVLKTL 169
              + L K  + L
Sbjct: 105 DAIRLLSKFAERL 117


>gi|300860220|ref|ZP_07106307.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           TUSoD Ef11]
 gi|295112913|emb|CBL31550.1| molybdenum cofactor biosynthesis protein A, bacterial [Enterococcus
           sp. 7L76]
 gi|300849259|gb|EFK77009.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           TUSoD Ef11]
          Length = 321

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 10  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEDIKKVKLTG 66

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 67  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 95


>gi|168215418|ref|ZP_02641043.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
           NCTC 8239]
 gi|182382388|gb|EDT79867.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
           NCTC 8239]
          Length = 331

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%)

Query: 99  LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C  +          +++  +    +        I +V  TGG+PL+ 
Sbjct: 22  ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 79

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
             + +  ++K +  I  ++ +   +         +  + ++ L E G K V I++     
Sbjct: 80  -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 132

Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           +   E +     ++ + +I +     + +   +V+L+  N   + + +L+    +  I  
Sbjct: 133 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLAYKNPID- 189

Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320
                          F+ +T  E  +I+   K+ +S      L  P   + + G  GK+
Sbjct: 190 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKPLRLNGPAKYISIEGFKGKI 247


>gi|188992759|ref|YP_001904769.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
           pv. campestris str. B100]
 gi|226707392|sp|B0RTE0|MOAA_XANCB RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|167734519|emb|CAP52729.1| Molybdenum cofactor biosynthesis protein A,probable [Xanthomonas
           campestris pv. campestris]
          Length = 339

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 15/113 (13%)

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125
           LP+    P+ D    PL+ +         L ++  C   C +C   + V    G      
Sbjct: 2   LPDLSAAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGLDADQR 53

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           LS    E  +        + ++  TGG+PL+   K L  +++ L  I+ ++ L
Sbjct: 54  LSFDQLETLVRAFVA-VGVTKLRLTGGEPLL--RKNLPVLIQRLAAIEGIEDL 103


>gi|110801520|ref|YP_699075.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
           SM101]
 gi|123341686|sp|Q0SS32|MOAA_CLOPS RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|110682021|gb|ABG85391.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
           SM101]
          Length = 323

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%)

Query: 99  LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C  +          +++  +    +        I +V  TGG+PL+ 
Sbjct: 14  ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
             + +  ++K +  I  ++ +   +         +  + ++ L E G K V I++     
Sbjct: 72  -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 124

Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           +   E +     ++ + +I +     + +   +V+L+  N   + + +L+    +  I  
Sbjct: 125 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLAYKNPID- 181

Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320
                          F+ +T  E  +I+   K+ +S      L  P   + + G  GK+
Sbjct: 182 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEGFKGKI 239


>gi|29375960|ref|NP_815114.1| molybdopterin cofactor biosynthesis protein A, putative
           [Enterococcus faecalis V583]
 gi|256965220|ref|ZP_05569391.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           HIP11704]
 gi|257419205|ref|ZP_05596199.1| predicted protein [Enterococcus faecalis T11]
 gi|29343422|gb|AAO81184.1| molybdopterin cofactor biosynthesis protein A, putative
           [Enterococcus faecalis V583]
 gi|256955716|gb|EEU72348.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           HIP11704]
 gi|257161033|gb|EEU90993.1| predicted protein [Enterococcus faecalis T11]
          Length = 324

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 13  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEDIKKVKLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 70  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98


>gi|4589922|dbj|BAA76928.1| molybdenum cofactor biosynthesis protein A [Clostridium
           perfringens]
          Length = 323

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%)

Query: 99  LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C  +          +++  +    +        I +V  TGG+PL+ 
Sbjct: 14  ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
             + +  ++K +  I  ++ +   +         +  + ++ L E G K V I++     
Sbjct: 72  -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 124

Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           +   E +     ++ + +I +     + +   +V+L+  N   + + +L+    +  I  
Sbjct: 125 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLAYKNPID- 181

Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320
                          F+ +T  E  +I+   K+ +S      L  P   + + G  GK+
Sbjct: 182 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKPLRLNGPAKYISIEGFKGKI 239


>gi|51595534|ref|YP_069725.1| molybdenum cofactor biosynthesis protein A [Yersinia
           pseudotuberculosis IP 32953]
 gi|149366845|ref|ZP_01888879.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
           CA88-4125]
 gi|153948299|ref|YP_001401799.1| molybdenum cofactor biosynthesis protein A [Yersinia
           pseudotuberculosis IP 31758]
 gi|162421199|ref|YP_001605953.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis Angola]
 gi|165938348|ref|ZP_02226906.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011582|ref|ZP_02232480.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|167400426|ref|ZP_02305939.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419585|ref|ZP_02311338.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|170025144|ref|YP_001721649.1| molybdenum cofactor biosynthesis protein A [Yersinia
           pseudotuberculosis YPIII]
 gi|186894590|ref|YP_001871702.1| molybdenum cofactor biosynthesis protein A [Yersinia
           pseudotuberculosis PB1/+]
 gi|218928323|ref|YP_002346198.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis CO92]
 gi|229841099|ref|ZP_04461258.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229843203|ref|ZP_04463349.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229894040|ref|ZP_04509226.1| molybdopterin biosynthesis protein A [Yersinia pestis Pestoides A]
 gi|229903439|ref|ZP_04518552.1| molybdopterin biosynthesis protein A [Yersinia pestis Nepal516]
 gi|24211993|sp|Q8ZGW5|MOAA_YERPE RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|51588816|emb|CAH20430.1| molybdenum cofactor biosynthesis protein A [Yersinia
           pseudotuberculosis IP 32953]
 gi|115346934|emb|CAL19823.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis CO92]
 gi|149291219|gb|EDM41294.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
           CA88-4125]
 gi|152959794|gb|ABS47255.1| molybdenum cofactor biosynthesis protein A [Yersinia
           pseudotuberculosis IP 31758]
 gi|162354014|gb|ABX87962.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis Angola]
 gi|165913726|gb|EDR32345.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165989530|gb|EDR41831.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166962326|gb|EDR58347.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167050375|gb|EDR61783.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|169751678|gb|ACA69196.1| molybdenum cofactor biosynthesis protein A [Yersinia
           pseudotuberculosis YPIII]
 gi|186697616|gb|ACC88245.1| molybdenum cofactor biosynthesis protein A [Yersinia
           pseudotuberculosis PB1/+]
 gi|229679209|gb|EEO75312.1| molybdopterin biosynthesis protein A [Yersinia pestis Nepal516]
 gi|229689550|gb|EEO81611.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229697465|gb|EEO87512.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229703925|gb|EEO90938.1| molybdopterin biosynthesis protein A [Yersinia pestis Pestoides A]
 gi|262361197|gb|ACY57918.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
           D106004]
 gi|262365246|gb|ACY61803.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis
           D182038]
          Length = 326

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 21/163 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  VC   C +C           + LS  +               ++  TGG+P +  
Sbjct: 17  LSITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAFAL-LGTEKIRLTGGEPSMRR 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
                 ++ T+R    ++ L         +  R+  ++ Q  ++AG    I +  +   P
Sbjct: 76  D--FTDIIATIRQNPAIRTL-----AVTTNGYRLVRDVAQW-RDAGLT-AINVSVDSLDP 126

Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
            +F          + +  I    +AG   +   +VL++ +ND 
Sbjct: 127 RQFHAITGQDKFYQVMQGIDAAFDAGFDKVKVNAVLMRDVNDR 169


>gi|228933203|ref|ZP_04096059.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228826364|gb|EEM72141.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 383

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 15  PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 71  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 121

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H        +  + AI  L    I +   +V+     D  E +A L+  
Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 181

Query: 261 F 261
            
Sbjct: 182 L 182


>gi|261343456|ref|ZP_05971101.1| molybdenum cofactor biosynthesis protein A [Providencia rustigianii
           DSM 4541]
 gi|282568603|gb|EFB74138.1| molybdenum cofactor biosynthesis protein A [Providencia rustigianii
           DSM 4541]
          Length = 326

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 21/162 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  VC   C +C       S +   L+  +               +V  TGG+P +  
Sbjct: 17  LSITDVCNFRCTYCLPDGYKPSGRHEFLTLDEIRRVSRAF-ADLGTEKVRITGGEPTMRK 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
                 ++  +R  + ++ +         +  R+  ++    ++AG    + +  +   P
Sbjct: 76  D--FSDIIAAIRENQSIKKI-----AVTTNGYRMARDIQTW-RDAGLN-AVNVSVDSLDP 126

Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGIND 249
            +F+         + +  I     AG   +   +VL+K +ND
Sbjct: 127 RQFAAITGQDKFFQVMQGIDAAFEAGFEKVKVNAVLMKNVND 168


>gi|212690677|ref|ZP_03298805.1| hypothetical protein BACDOR_00164 [Bacteroides dorei DSM 17855]
 gi|237725132|ref|ZP_04555613.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. D4]
 gi|265754350|ref|ZP_06089539.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 3_1_33FAA]
 gi|212666777|gb|EEB27349.1| hypothetical protein BACDOR_00164 [Bacteroides dorei DSM 17855]
 gi|229436398|gb|EEO46475.1| involved moaA/nifB/pqqE family protein [Bacteroides dorei
           5_1_36/D4]
 gi|263235059|gb|EEZ20614.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 3_1_33FAA]
          Length = 498

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 71/192 (36%), Gaps = 39/192 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIWEVIFTGGDPLI 156
             L + C  +C++C            + S   T+  +  I      Q+ +V   GG+  +
Sbjct: 146 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 200

Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212
               ++  +LK L  R I         +++P+        +L+Q ++E G    V I++ 
Sbjct: 201 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 249

Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261
           A H    +           E +  +  L ++G+     SVL    N    +LA L+    
Sbjct: 250 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQLNVLAELLHELS 308

Query: 262 -----VELRIKP 268
                 + RI P
Sbjct: 309 HLKHIRDWRIIP 320


>gi|49477412|ref|YP_036045.1| coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49328968|gb|AAT59614.1| coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
          Length = 377

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 9   PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 64

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 65  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 115

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H        +  + AI  L    I +   +V+     D  E +A L+  
Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 175

Query: 261 F 261
            
Sbjct: 176 L 176


>gi|291545179|emb|CBL18288.1| ribonucleoside-triphosphate reductase class III activase subunit
           [Ruminococcus sp. 18P13]
          Length = 168

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 31/93 (33%), Gaps = 9/93 (9%)

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
           G  N S + G     P       +  CP +C  C       +      +  D    LA I
Sbjct: 7   GTENDSIVDG-----PGIRFTIFVQGCPHHCPGC---HNPQTHDFAGGTDTDCAQLLARI 58

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
                +  V F+GG+P       L ++   LR 
Sbjct: 59  DANPLLDGVTFSGGEPFC-QASVLAELGAKLRQ 90


>gi|312116333|ref|YP_004013929.1| molybdenum cofactor biosynthesis protein A [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311221462|gb|ADP72830.1| molybdenum cofactor biosynthesis protein A [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 345

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 62/175 (35%), Gaps = 27/175 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   A       + ++  TGG+PL+  
Sbjct: 31  VSVTDRCDFRCVYCMPDRMQFLPKAELLTLEELDRLCAGFIA-KGVRKIRLTGGEPLM-- 87

Query: 159 HKRLQKVLKTLRY------IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211
            + L  +++ L        +  V +    SR+          E    LK+AG + V I++
Sbjct: 88  RRNLLLLVRALSRHLDAGTLDEVTLTSNGSRM---------AEFAASLKDAGVRRVNISL 138

Query: 212 HANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDDPEILANLM 258
                 +F             A I      G+ +    V LK IN+       L 
Sbjct: 139 DTRDADKFRAVTRRGDLAAVLAGIRAAKAVGLHVKINMVALKAINESEIEDMLLW 193


>gi|251790124|ref|YP_003004845.1| molybdenum cofactor biosynthesis protein A [Dickeya zeae Ech1591]
 gi|247538745|gb|ACT07366.1| molybdenum cofactor biosynthesis protein A [Dickeya zeae Ech1591]
          Length = 340

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 34/255 (13%), Positives = 76/255 (29%), Gaps = 47/255 (18%)

Query: 99  LKLLHVCPVYCRFCFRR-EMVGSQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           L +  VC   C +C                S  +               +V  TGG+P +
Sbjct: 29  LSITDVCNFRCTYCLPDGYQPNGATPHRFLSLSEIRRIGRAF-ADLGTEKVRLTGGEPSL 87

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215
                  +++  +R    ++ L         +  R+  ++    ++AG    + +  +  
Sbjct: 88  RRDFV--EIIAAIRENPAIRTL-----AVTTNGYRLARDVASW-RDAGLT-ALNVSVDSL 138

Query: 216 -PYEFSE-----EAIAAISRLANAGI----ILLSQSVLLKGINDDPEILANLMRTFVELR 265
            P +F       +    +  +  A       +   +VL++ +ND      +L      +R
Sbjct: 139 DPRQFHAITGQDKFRQVMDGIDAAFANGFRRVKVNTVLMRDVNDS-----SLHTFLEWIR 193

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY---------ILDLPGG 316
            +P                    EG+++    +  +SG               + +   G
Sbjct: 194 TRP---IQLRFIELME-----TGEGREMFR--RHHVSGQVIRERLLQQGWLQQVRERSDG 243

Query: 317 YGKVKIDTHNIKKVG 331
             +V        +VG
Sbjct: 244 PAQVFSHPDYQGEVG 258


>gi|229187971|ref|ZP_04315068.1| Coenzyme PQQ synthesis protein [Bacillus cereus BGSC 6E1]
 gi|228595507|gb|EEK53230.1| Coenzyme PQQ synthesis protein [Bacillus cereus BGSC 6E1]
          Length = 361

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 26/177 (14%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +L   C + C  C R E    +    L+ ++ +  +  I E +    ++FTGGDPL+ 
Sbjct: 2   IWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDNIYEMNNPM-LVFTGGDPLMR 59

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--------- 208
               +  +      IK  + +R  S  P   P  +  E IQ  KE G   +         
Sbjct: 60  PD--IYDIAD--YAIK--KGVRV-SMTPSATPN-VTKETIQKAKEVGIARWAFSLDGPTA 111

Query: 209 -IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
            I  H       +E +   I AI  L    I +   +V+     +  E +A L+   
Sbjct: 112 EIHDHFRGVEGSFELT---INAIRYLHELEIPIQINTVISNYNVNVLEDMAKLVEEL 165


>gi|23016109|ref|ZP_00055869.1| COG1964: Predicted Fe-S oxidoreductases [Magnetospirillum
           magnetotacticum MS-1]
          Length = 456

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 63/172 (36%), Gaps = 35/172 (20%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIWEVIFTGGDP 154
            L+++   C + C  CF +   G       S  + EA L  +   E      V  +GG+P
Sbjct: 99  ALVEVTDSCGLDCPTCFAQSRPGR---GHRSLAEVEAMLDAVVRSEGGSPDIVQISGGEP 155

Query: 155 LILSHKRLQKVLKT--LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
                 ++ ++L+    R I+HV +     R+      R +P+    L   G    + + 
Sbjct: 156 ADHP--QILEILRAAKARPIRHVMLNTNGVRL-----AR-DPDFATALAGLGPGFEVYLQ 207

Query: 213 ANHPYEFSEEA-------------IAAISRLANAGI--ILLSQSVLLKGIND 249
                    EA               A++ L   GI   L+   V+ KG+ND
Sbjct: 208 ---WDSLEPEALSVLRGADLREVRKGALAALDRHGISTTLVC--VMAKGVND 254


>gi|289432755|ref|YP_003462628.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. GT]
 gi|288946475|gb|ADC74172.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. GT]
          Length = 416

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 24/128 (18%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  +K+   C  +C +C     RR         ++S  +   A  Y        E++ 
Sbjct: 126 RTRSFIKIQDGCDNFCTYCIVPFVRRYKNCRGVDDIISEINLRQAEGY-------QEIVL 178

Query: 150 TGGDP--LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           TG +      S   L  +++ +     +  LR  S    + P  I   L+   K      
Sbjct: 179 TGTEIGEYTSSGFNLAGLIEAILERTRIPRLRLSS----LQPNEITLPLLALWKNRRL-- 232

Query: 208 YIAIHANH 215
                 NH
Sbjct: 233 -----CNH 235


>gi|297543929|ref|YP_003676231.1| Radical SAM domain-containing protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841704|gb|ADH60220.1| Radical SAM domain protein [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 453

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156
           + +   C + C +C++R+     K   +S K  ++ +  I    K +   ++  GG+PL+
Sbjct: 89  IYVTTECNLNCPYCYQRD--YKSKNITISKKHVDSVVTTIDLLSKKENKHLVIFGGEPLL 146

Query: 157 LSHKRLQKVL-KTLRYIK-HVQILR 179
             +K++ + +    + I   V+I+ 
Sbjct: 147 PQNKQIIEYMFDRFKTIDATVEIVT 171


>gi|289577626|ref|YP_003476253.1| radical SAM protein [Thermoanaerobacter italicus Ab9]
 gi|289527339|gb|ADD01691.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9]
          Length = 453

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 6/85 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156
           + +   C + C +C++R+     K   +S K  ++ +  I    K +   ++  GG+PL+
Sbjct: 89  IYVTTECNLNCPYCYQRD--YKSKNITISKKHVDSVVTTIDLLSKKENKHLVIFGGEPLL 146

Query: 157 LSHKRLQKVL-KTLRYIK-HVQILR 179
             +K++ + +    + I   V+I+ 
Sbjct: 147 PQNKQIIEYMFDRFKTIDATVEIVT 171


>gi|253575296|ref|ZP_04852634.1| radical SAM domain-containing protein [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251845293|gb|EES73303.1| radical SAM domain-containing protein [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 368

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 14/86 (16%)

Query: 99  LKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGD-- 153
           L   +VC  +C FC FR++  G +    LS ++    +AY+++     + E    GG   
Sbjct: 67  LYFTNVCESHCAFCSFRKDQ-GEEGAYTLSGEE---MVAYVKQHITPGVREFHIVGGHNN 122

Query: 154 --PLILSHKRLQKVLKTLRYIKHVQI 177
             P       L+ + +      HV I
Sbjct: 123 HVPFQYYVDSLKALKENF---PHVTI 145


>gi|163760609|ref|ZP_02167690.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
 gi|162282224|gb|EDQ32514.1| OmpA/MotB [Hoeflea phototrophica DFL-43]
          Length = 588

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 19/73 (26%)

Query: 13  DLYNANLIKKEQIDEIKEISNHYSIAL-----------TPVIANLINPHN--------PN 53
            L       + Q D I+ +   Y + +           +P   +L    N        PN
Sbjct: 59  TLQGLAPDPENQADAIETVRQTYGVRVVTDATGLLPVQSPYFLSLEKTENGLLLSGFAPN 118

Query: 54  DPIARQFIPQKEE 66
           D   RQ +    E
Sbjct: 119 DAARRQLVALLSE 131


>gi|15893169|ref|NP_360883.1| hypothetical protein RC1246 [Rickettsia conorii str. Malish 7]
 gi|81527850|sp|Q92G77|MIAB_RICCN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|15620380|gb|AAL03784.1| unknown [Rickettsia conorii str. Malish 7]
          Length = 445

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)

Query: 76  DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           D + +     L      YP      + +   C  +C FC     V         S++ E 
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185

Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
                    +  +V+ +G   ++L               +   L  +LK L  I +++ L
Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239

Query: 179 RFHSRVPI 186
           R+ +  PI
Sbjct: 240 RYTTSHPI 247


>gi|84688004|ref|ZP_01015867.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84663985|gb|EAQ10486.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
           HTCC2654]
          Length = 443

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 9/97 (9%)

Query: 96  RILLKLLHVCPVYCRFC----FRREMVGSQKGTVL--SSKDTEAALAYIQEKSQIWEVIF 149
              L +   C  +C FC     R   V      +L  + +  E  +  I    Q      
Sbjct: 154 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPPERILREARELVERGVREITLLGQNVNAYH 213

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             GD        L +++  L  I  ++ +RF +  P 
Sbjct: 214 GAGDG---GDWSLARLIWALNDIDGLERIRFTTSHPN 247


>gi|317470624|ref|ZP_07930010.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
 gi|316901915|gb|EFV23843.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA]
          Length = 453

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + CR+CF  E       +++S +  + AL ++ E S      EV F GG+PL
Sbjct: 96  LHIAHDCNLACRYCFAEEGEYHGDRSMMSFEVGKQALDFLVENSGSRRNLEVDFFGGEPL 155

Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRF 180
           +     K+L    ++L   KH +  RF
Sbjct: 156 MNFEVVKQLVAYGRSLEE-KHSKKFRF 181


>gi|313674192|ref|YP_004052188.1| miab-like tRNA modifying enzyme [Marivirga tractuosa DSM 4126]
 gi|312940890|gb|ADR20080.1| MiaB-like tRNA modifying enzyme [Marivirga tractuosa DSM 4126]
          Length = 439

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 54/124 (43%), Gaps = 12/124 (9%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C FC      G  +   +  ++   +   I     + E++ TG  
Sbjct: 140 RTRTFLKVQDGCNYHCAFCTIPLARGKSRSDTI--ENIVKSAKQIAS-EDVKEIVLTGVN 196

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
            GD  I   KR ++ +  ++ + +V+ + RF  R+  ++P  +  E+I+ + ++ +    
Sbjct: 197 TGDFGIQEGKRKERFVDLVKELDNVEGIDRF--RISSIEPNLLTNEIIEFVSQSKR---F 251

Query: 210 AIHA 213
             H 
Sbjct: 252 VPHF 255


>gi|221067914|ref|ZP_03544019.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
           KF-1]
 gi|220712937|gb|EED68305.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
           KF-1]
          Length = 380

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 39/244 (15%), Positives = 78/244 (31%), Gaps = 46/244 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+           ++LS ++             + ++  TGG+
Sbjct: 44  ISVTDRCNFRCNYCMPKEVFDKNYQYLPHSSLLSFEEITRLARLFVAH-GVRKLRLTGGE 102

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGK 205
           PL+   K ++ ++  L  +          R P   P  +             + LKEAG 
Sbjct: 103 PLL--RKNIEALIAQLAEL----------RTPDGLPLDLTLTTNASLLARKARALKEAGL 150

Query: 206 PVYIA-------IHANHPYEFSEEAIAAISRLANAGIILLSQ----SVLLKGINDDPEIL 254
                              +        ++ +  A    LS      V+ +G NDD   +
Sbjct: 151 NRVTVSLDGLDDAVFRRMNDVDFPVTDVLAGIEAAQATGLSHIKVNMVVKRGTNDD--QI 208

Query: 255 ANLMRTFVELRIKPYYLHHP-DLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILD 312
             + R F    I              T+ +R+  +    +++A L+ ++     P     
Sbjct: 209 LPMARYFRGTGIT--LRFIEYMDVGATNGWRMDEVLPSDEVIARLRAELP--LIP-LAPS 263

Query: 313 LPGG 316
            PG 
Sbjct: 264 APGE 267


>gi|167746208|ref|ZP_02418335.1| hypothetical protein ANACAC_00913 [Anaerostipes caccae DSM 14662]
 gi|167654201|gb|EDR98330.1| hypothetical protein ANACAC_00913 [Anaerostipes caccae DSM 14662]
          Length = 442

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + CR+CF  E       +++S +  + AL ++ E S      EV F GG+PL
Sbjct: 85  LHIAHDCNLACRYCFAEEGEYHGDRSMMSFEVGKQALDFLVENSGSRRNLEVDFFGGEPL 144

Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRF 180
           +     K+L    ++L   KH +  RF
Sbjct: 145 MNFEVVKQLVAYGRSLEE-KHSKKFRF 170


>gi|229587170|ref|YP_002845671.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rickettsia
           africae ESF-5]
 gi|228022220|gb|ACP53928.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia africae ESF-5]
          Length = 445

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)

Query: 76  DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           D + +     L      YP      + +   C  +C FC     V         S++ E 
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185

Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
                    +  +V+ +G   ++L               +   L  +LK L  I +++ L
Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239

Query: 179 RFHSRVPI 186
           R+ +  PI
Sbjct: 240 RYTTSHPI 247


>gi|162452546|ref|YP_001614913.1| hypothetical protein sce4270 [Sorangium cellulosum 'So ce 56']
 gi|238066605|sp|A9F1Y8|RIMO_SORC5 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|161163128|emb|CAN94433.1| hypothetical protein sce4270 [Sorangium cellulosum 'So ce 56']
          Length = 488

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 35/180 (19%), Positives = 67/180 (37%), Gaps = 26/180 (14%)

Query: 64  KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123
           +  L   P E     GD       G          +K+   C   C FC   ++ G+Q+ 
Sbjct: 120 ERMLVGNPAEWLIQAGDPRTLSTPG------GSAYVKIAEGCNRTCSFCVIPDLRGAQRS 173

Query: 124 TVLSS--KDTEA-ALAYIQEKSQI-WEVIFTGGDPLILSH----KRLQKVLKTLRYIKHV 175
             +    ++ E  A A ++E + I  + I  G D    S       L ++++ +  +  V
Sbjct: 174 RPIPDVVREVEQLAAAGVREINLISQDTIAYGRDAAGRSEGGARATLAQLVERVADVPGV 233

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISRLANAG 234
           + +R       + P+ +  +L++ L    + V Y+ +   H       A  A+ R    G
Sbjct: 234 RWVRL----FYLYPETMTDDLVELLAGHPRVVPYVDMPLQH-------AADAMLRRMRRG 282


>gi|15807908|ref|NP_285567.1| hypothetical protein DR_A0244 [Deinococcus radiodurans R1]
 gi|6460688|gb|AAF12393.1|AE001863_18 conserved hypothetical protein [Deinococcus radiodurans R1]
          Length = 355

 Score = 37.8 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 28/209 (13%), Positives = 63/209 (30%), Gaps = 38/209 (18%)

Query: 97  ILLKLLHVCP-VYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGGD 153
           ++++    C    C FC F R+   S +     +   +A    + E +++   +    G+
Sbjct: 111 VVVQATRGCSWNRCTFCTFYRDRPFSVQAPDAFAAHLQAVAELLGEGARLRRSIFLADGN 170

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
            L+LS+++L  ++   R                  P R     +     + K V      
Sbjct: 171 ALMLSNRKLLPLIAQARA---------------AFPGREVHGFLDVFTGSRKTVA----- 210

Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND---DPEILANLMRTFVELR--IKP 268
               E     +  +      G        LL  + D          L+         + P
Sbjct: 211 -DWRELRGAGVRRVYLGLETGHD-----PLLAWL-DKPGSAAQATELIHDLKAAGLNVAP 263

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
             +       G ++    + +  +++  L
Sbjct: 264 --IFMT-GVGGQTYAAAHLADTLRLLERL 289


>gi|315608055|ref|ZP_07883048.1| 2-methylthioadenine synthetase [Prevotella buccae ATCC 33574]
 gi|315250524|gb|EFU30520.1| 2-methylthioadenine synthetase [Prevotella buccae ATCC 33574]
          Length = 450

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 19/126 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQIWEVIFT 150
             R  LK+   C  +C +C      G  +   ++S   +  EAAL          E++ T
Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVEQAREAALE------GGREIVLT 206

Query: 151 G---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           G   GD    +H+    ++K L  ++ ++  R  S    ++P   + EL++    +    
Sbjct: 207 GVNIGDFGATTHESFLDLVKALDEVEGIERFRISS----LEPDLCSDELVEYCSISR--- 259

Query: 208 YIAIHA 213
               H 
Sbjct: 260 AFMPHF 265


>gi|308184088|ref|YP_003928221.1| hypothetical protein HPSJM_01540 [Helicobacter pylori SJM180]
 gi|308060008|gb|ADO01904.1| hypothetical protein HPSJM_01540 [Helicobacter pylori SJM180]
          Length = 418

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHS 182
            +           + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDKESNIARLIKKLSQITGLKRIRIGS 221


>gi|291550955|emb|CBL27217.1| Organic radical activating enzymes [Ruminococcus torques L2-14]
          Length = 216

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 5/75 (6%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +      C + C +C    M  ++       +  E  L Y+ E   I  V  TGG+PL+
Sbjct: 21  AVFIRFKGCNLRCSYC--DTMWANEPDCQYKEETPEEILNYVLET-GIRNVTLTGGEPLL 77

Query: 157 LSHKRLQKVLKTLRY 171
                +++++  L  
Sbjct: 78  QKD--IRELIHLLLQ 90


>gi|178847576|pdb|3CIX|A Chain A, X-Ray Structure Of The [fefe]-Hydrogenase Maturase Hyde
           From Thermotoga Maritima In Complex With Thiocyanate
          Length = 348

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R +++  +VC   C +C  R    + K   ++ ++         +      V+ +G DP 
Sbjct: 54  RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY 113

Query: 156 ILSHKRLQKVLKTLRYI 172
            +    +  ++K ++ +
Sbjct: 114 YMPD-VISDIVKEIKKM 129


>gi|167032510|ref|YP_001667741.1| molybdenum cofactor synthesis domain-containing protein
           [Pseudomonas putida GB-1]
 gi|166858998|gb|ABY97405.1| molybdenum cofactor synthesis domain protein [Pseudomonas putida
           GB-1]
          Length = 322

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C +C    + +V +Q    LS+      +AY+ E + +  +  TGG+PLI
Sbjct: 15  VSLTAACNYACTYCVPDGKRLVAAQDE--LSADSLARGVAYLIEAAGVERLRITGGEPLI 72

Query: 157 LSHKRLQKVLKTLRYIK 173
               RL   L  +  + 
Sbjct: 73  SP--RLDAFLAGVAKLD 87


>gi|104780794|ref|YP_607292.1| molybdenum cofactor biosynthesis protein A [Pseudomonas entomophila
           L48]
 gi|95109781|emb|CAK14486.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas
           entomophila L48]
          Length = 322

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C +C    + +V +Q    L++      +AY+ E + I  +  TGG+PLI
Sbjct: 15  VSLTAACNYACTYCVPDGKRLVAAQDE--LTADALARGVAYLVEAAGIERLRITGGEPLI 72

Query: 157 LSHKRLQKVLKTLRYI 172
               RL+  LK +  +
Sbjct: 73  SP--RLEAFLKAVAGL 86


>gi|327539767|gb|EGF26370.1| SSU ribosomal protein S12P methylthiotransferase [Rhodopirellula
           baltica WH47]
          Length = 476

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 16/118 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDP 154
             LK+   C   C FC     +   +G   S    E  +   +    S + EV+    D 
Sbjct: 178 AYLKISEGCDRLCTFC----AIPKMRGKHFSKP-IEQIIDEAKRLGDSGVREVVIVAQDT 232

Query: 155 LILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
                 R     L ++LK L  I+ +  +R         P  I+  LI  L  A + V
Sbjct: 233 TYYGMDRYGEPRLNQLLKELDKIESIDWIRL----MYFYPMYIDDALIDTLASAKRIV 286


>gi|323694864|ref|ZP_08109017.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14673]
 gi|323501090|gb|EGB16999.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14673]
          Length = 486

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 2/74 (2%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157
           +     CP +C +C   + +   K  + S ++      YI +   ++ EV+    D    
Sbjct: 213 IFTGRGCPAHCNYCVYPQTLHGHKYRLRSPENVVEEFEYIAKNFPEVHEVVIE-DDTFTA 271

Query: 158 SHKRLQKVLKTLRY 171
           + +R+ K+ + L  
Sbjct: 272 NKERVIKICELLEE 285


>gi|299769674|ref|YP_003731700.1| molybdenum cofactor biosynthesis protein A [Acinetobacter sp. DR1]
 gi|298699762|gb|ADI90327.1| molybdenum cofactor biosynthesis protein A [Acinetobacter sp. DR1]
          Length = 343

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 31/168 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQ--EKSQIWEVIFTGGD 153
           + +   C   C +C        +    L+ +D    EA   + +   +  I  +  TGG+
Sbjct: 26  ISVTDRCNFKCVYCM------PEHPEWLNKQDLLSFEALFQFCRFMVQQGIESIRITGGE 79

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYI- 209
           PL+   + +   ++ L+ +K + + R      +        +  + LK+AG     + + 
Sbjct: 80  PLM--RQGIVHFVRDLQALKALGLKRIS----MTTNGHYLAKYAKQLKDAGLDDLNISLD 133

Query: 210 ---AIHANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
              +I      E +    E  +  I    +AG+      VL+K  NDD
Sbjct: 134 SLDSIQF---KELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDD 178


>gi|260431178|ref|ZP_05785149.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260415006|gb|EEX08265.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 439

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 13/110 (11%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
              L +   C  +C FC      G++  +  + +    A   ++    + E+   G +  
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRILREAQDLVER--GVREITLLGQNVN 206

Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
                       L  ++  L  I  ++ +RF +  P      +  +LI+ 
Sbjct: 207 AYHGAGPNGDMTLAGLIWELNRIDGLERIRFTTSHPND----MTDDLIEA 252


>gi|238650870|ref|YP_002916725.1| tRNA 2-methylthioadenosine synthase [Rickettsia peacockii str.
           Rustic]
 gi|238624968|gb|ACR47674.1| tRNA 2-methylthioadenosine synthase [Rickettsia peacockii str.
           Rustic]
          Length = 445

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)

Query: 76  DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           D + +     L      YP      + +   C  +C FC     V         S++ E 
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185

Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
                    +  +V+ +G   ++L               +   L  +LK L  I +++ L
Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239

Query: 179 RFHSRVPI 186
           R+ +  PI
Sbjct: 240 RYTTSHPI 247


>gi|237711763|ref|ZP_04542244.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|229454458|gb|EEO60179.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
          Length = 234

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 8/80 (10%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
            Y   + +++   C + C  C R    G  +   +  K     L +++    I     TG
Sbjct: 4   LYIKNLCIEITRRCNMRCTHCMR----GDAESVDIPLKHISNLLRHVRH---IHHFNITG 56

Query: 152 GDPLILSHKRLQKVLKTLRY 171
           G+P  L+ + ++ +L+ +R 
Sbjct: 57  GEP-SLNVRAIRHILERVRA 75


>gi|256391490|ref|YP_003113054.1| molybdenum cofactor biosynthesis protein A [Catenulispora
           acidiphila DSM 44928]
 gi|256357716|gb|ACU71213.1| molybdenum cofactor biosynthesis protein A [Catenulispora
           acidiphila DSM 44928]
          Length = 329

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 21/164 (12%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDPLI 156
           + L   C + C +C   E +    K  +LS ++    +  I      + ++ FTGG+PL+
Sbjct: 15  VSLTDRCNLRCTYCMPAEGLPWLPKAELLSDEEILRLIG-IAVHLLGVDQIRFTGGEPLV 73

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANH 215
                L  ++  +  +     +   +             L   LK+AG   V +++    
Sbjct: 74  --RPGLATLVARVAQLDPRPRISLTTNALG------LARLAPTLKDAGLDRVNVSLDTLD 125

Query: 216 P---YEFSEEAIAA------ISRLANAGIILLSQSVLLKGINDD 250
           P    E +     A       +  A     +   SVL++G+ND 
Sbjct: 126 PAVFRELTRRDRFADVVAGLEAAAAAGLTPVKVNSVLMRGVNDT 169


>gi|83590083|ref|YP_430092.1| radical SAM family protein [Moorella thermoacetica ATCC 39073]
 gi|83572997|gb|ABC19549.1| Radical SAM [Moorella thermoacetica ATCC 39073]
          Length = 470

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 42/233 (18%), Positives = 74/233 (31%), Gaps = 55/233 (23%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG---TVLSSKDTEAALAYIQEKSQI-- 144
             RY    +L L   C + C FC  R+     +      L  ++ +  L Y+    +I  
Sbjct: 11  ASRYN---ILPLTSTCNLGCLFCSHRQNPPGVETWRLQPLKGEEIDNLLDYLDGDRKIVI 67

Query: 145 --WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQC 199
                    G+PL             L  I+ V+  RF  R       +   + P LI+ 
Sbjct: 68  GESATRLIEGEPLTHPDF--------LAIIRKVRR-RF-PRARLEITTNGTLLTPNLIRE 117

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           L +  +P+ I +  N     S E    +    N G  L  Q+ +                
Sbjct: 118 LADL-QPLEINLSLNSA---SPEGRRRLMGDRNPGAAL--QAPM---------------- 155

Query: 260 TFVELRIKPYYLHHPDLAA-----GTSHFR-LTIEEGQKIVASLKEKISGLCQ 306
              +  I    ++   L A     G   FR   +   +    +++  + G  +
Sbjct: 156 ALQQAGI----IYQGSLVACPWLVGWDDFRETILYLARAGARTIRVFLPGYTR 204


>gi|15613715|ref|NP_242018.1| coproporphyrinogen III oxidase [Bacillus halodurans C-125]
 gi|10173768|dbj|BAB04871.1| BH1152 [Bacillus halodurans C-125]
          Length = 498

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 63/164 (38%), Gaps = 21/164 (12%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDT 131
           I +   + L  +        +   +  CP  C +C F    +  + G+V +       + 
Sbjct: 152 IVERQLAVLPDLDELDRGVSVYIGIPFCPTKCAYCTFPAYAINGKNGSVEAFLAGLHYEI 211

Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLR----YIKHVQILRFHSRVPI 186
           EA   ++ +    +  V F GG P  ++ +++  + +TL      +  V+ L     V  
Sbjct: 212 EATGKWLTDHQIPVTTVYFGGGTPTSITAEQMDALYETLYDSFPAMNQVRELT----VEA 267

Query: 187 VDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR 229
             P  I PE I+ LK+     + I      P  F  E + AI R
Sbjct: 268 GRPDTITPEKIEVLKKWNVDRISIN-----PQSFENETLQAIGR 306


>gi|313891888|ref|ZP_07825490.1| six-Cys-in-45 modification radical SAM protein [Dialister
           microaerophilus UPII 345-E]
 gi|313119663|gb|EFR42853.1| six-Cys-in-45 modification radical SAM protein [Dialister
           microaerophilus UPII 345-E]
          Length = 477

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF  +    +   ++S      A+ ++   S      EV F GG+PL
Sbjct: 101 LNIAHDCNLRCKYCFAGQGGYGKWRMLMSFDVARRAIDFLIAHSGPRKHCEVDFFGGEPL 160

Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
            ++   +Q+ +  +R  +  H +I+R 
Sbjct: 161 -MNWHVIQQTVTYIRQKERKHNKIVRL 186


>gi|228945522|ref|ZP_04107872.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229121458|ref|ZP_04250685.1| Coenzyme PQQ synthesis protein [Bacillus cereus 95/8201]
 gi|228661922|gb|EEL17535.1| Coenzyme PQQ synthesis protein [Bacillus cereus 95/8201]
 gi|228814040|gb|EEM60311.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 383

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 15  PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 71  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 121

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H        +  + AI  L    I +   +V+     D  E +A L+  
Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 181

Query: 261 F 261
            
Sbjct: 182 L 182


>gi|167630431|ref|YP_001680930.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1]
 gi|238066299|sp|B0TIH8|RIMO_HELMI RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|167593171|gb|ABZ84919.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1]
          Length = 460

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 37/232 (15%), Positives = 76/232 (32%), Gaps = 81/232 (34%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVGSQKGTV------LSSKDTEAALAYIQEKSQIWE 146
             +K+   C   C +C     R       + ++      L  +  + AL  I + +  + 
Sbjct: 163 AYVKIADGCDNRCGYCAIPNLRGRFRSRSEESIVEETRSLVDRGIQEAL-LIAQDTTCYG 221

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           V   G         RL +++  L  I  ++ +R         P    PELI+ +    K 
Sbjct: 222 VDRYGE-------FRLAQLIGKLASIDGLRWIRL----MYCYPSHFTPELIEAMAAEPKV 270

Query: 207 V-YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
             Y+ +   H     +E + +++R  +AG+                              
Sbjct: 271 CRYVDLPLQHA---DDELLRSMNR--HAGV------------------------------ 295

Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGG 316
                                 +E ++++ +L+E++ GL     +I+ LPG 
Sbjct: 296 ----------------------DEIRRLIRTLRERLPGLAIRTSFIVGLPGE 325


>gi|118575230|ref|YP_874973.1| Fe-S oxidoreductase [Cenarchaeum symbiosum A]
 gi|118193751|gb|ABK76669.1| Fe-S oxidoreductase [Cenarchaeum symbiosum A]
          Length = 304

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 44/116 (37%), Gaps = 14/116 (12%)

Query: 98  LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155
           + ++   C    C FC   +M  S++ +    +   + +  + ++      V    GD L
Sbjct: 31  IFQVTLGCSFNQCSFC---DMYRSKEYSERPWEQVRSEIDLMARQMPDTKRVFLADGDAL 87

Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRI---NPELIQCLKEAGKPV 207
            L    + K+++ +      ++ +          P  I   + + +  L+EAG  +
Sbjct: 88  NLDTDYMVKIVRHVKESFPSLERI-----SCYAMPMNILKKSDDELNRLREAGLDM 138


>gi|114326910|ref|YP_744067.1| radical SAM superfamily protein [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315084|gb|ABI61144.1| radical SAM superfamily protein [Granulibacter bethesdensis
           CGDNIH1]
          Length = 331

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 27/168 (16%)

Query: 91  HRY-PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--EV 147
            RY P    + +   C + C +C       ++  T          LA I   +++    +
Sbjct: 26  SRYNPLLAQVVVTRRCNLACGYC-------NEYDTFSPPVPLPELLARIDHLAKLRTASI 78

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP- 206
            FTGG+PL+    +L + ++  R    +  +       I +  R+    I  L  AG   
Sbjct: 79  TFTGGEPLLHP--QLDEAIRAARRHGMIVTM-------ITNGFRLTKAWIDRLNAAGLQG 129

Query: 207 VYIAIHANHPYEFS----EEAIAAISRLAN-AGIILLSQSVLLKGIND 249
           + I+I    P E S          +  LA  A   +   SVL  GI+D
Sbjct: 130 MQISIDNLEPDEVSMKSLHSVEKKLGLLAEHAQFKVNVNSVL--GISD 175


>gi|53803496|ref|YP_114807.1| MoaA/NifB/PqqE family protein [Methylococcus capsulatus str. Bath]
 gi|53757257|gb|AAU91548.1| MoaA/NifB/PqqE family protein [Methylococcus capsulatus str. Bath]
          Length = 455

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 25/166 (15%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPLI 156
           +L++   C + C  C+     G    +  S  +    L  I E     +V+  +GG+P +
Sbjct: 102 VLEVTGHCNLRCPVCY--AGSGPDNPSYRSLDEIGRMLDTIVENEGEPDVVQISGGEPTL 159

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
               R   +LK  R    ++ L  ++   ++   R +P+  + L E G  + + +     
Sbjct: 160 HP--RFFDILKEARRRP-IRHLMVNTNGIVL--AR-DPDFARRLAEFGPGLEVYLQF--- 210

Query: 217 YEFSEEA-------------IAAISRLANAGIILLSQSVLLKGIND 249
               +                 A+  L  AGI     + L KG+ND
Sbjct: 211 DSLDDAVLRQLRGADLARIHEQALEHLNAAGISTSLVATLRKGLND 256


>gi|296447401|ref|ZP_06889327.1| molybdenum cofactor biosynthesis protein A [Methylosinus
           trichosporium OB3b]
 gi|296255104|gb|EFH02205.1| molybdenum cofactor biosynthesis protein A [Methylosinus
           trichosporium OB3b]
          Length = 360

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 33/168 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    +  +L+ ++ +       E+    ++  TGG+PL+  
Sbjct: 44  VSVTDRCDFRCVYCMSEHMEFLPRRDLLTLEELDRLCTAFIERGT-RKLRITGGEPLMRR 102

Query: 159 H-----KRLQK-----VLKTLRYIKHVQILRFHS--------RVPIVDPQRINPELIQCL 200
                 +RL +     +L  L    +   L  H+        +   V    ++PE  + L
Sbjct: 103 DISSLFRRLSRHLASGLLDELTLTTNGSQLERHAPALADCGVKRVNVSLDTLDPERFRAL 162

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
              G         +H        +A I     AG+ +   +V LKG+N
Sbjct: 163 TRTG---------DHAR-----VLAGIEAALAAGLQVKLNAVALKGVN 196


>gi|254292730|ref|YP_003058753.1| radical SAM protein [Hirschia baltica ATCC 49814]
 gi|254041261|gb|ACT58056.1| Radical SAM domain protein [Hirschia baltica ATCC 49814]
          Length = 314

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 16/124 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGGDPLIL 157
                +C + C  C+      + +   L+  D       ++ +++   E+ FTGG+P + 
Sbjct: 36  FNTGTLCNIECANCYIESSPTNDRLVYLTLADILPFFDELESENECGVEIGFTGGEPFMA 95

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVD---PQ---RINPELIQCLKEAGKPVYIAI 211
                 +++  L       ++R HS + + +   P    RI   LI   +  G  + + +
Sbjct: 96  P-----QIIDMLEE----SLVRGHSVLVLTNAMHPMMRPRIQAGLINLKERFGNQLTLRV 146

Query: 212 HANH 215
             +H
Sbjct: 147 SLDH 150


>gi|226954112|ref|ZP_03824576.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ATCC
           27244]
 gi|226835153|gb|EEH67536.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ATCC
           27244]
          Length = 343

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 78/229 (34%), Gaps = 26/229 (11%)

Query: 86  LKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           L  +  +Y     ++ + +   C   C +C        +K  +LS +       Y+  + 
Sbjct: 11  LPILQDQYARIKRKLRISVTDRCNFKCVYCMPEHPEWMKKQDLLSFEALFLFCQYMVSQ- 69

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            I  +  TGG+PL+   + +   +  L+ ++   + R      I        +  Q LK 
Sbjct: 70  GIENIRITGGEPLM--RQGVVHFIAELQALRAEGLKRIS----ITTNAHYLTKYAQQLKN 123

Query: 203 AGKP-VYIA------IHAN--HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253
           AG   + I+               E +   +A I     A +      VL+KG NDD  +
Sbjct: 124 AGLDDLNISLDSLDPTQFKSLTKKELAP-VLAGIEAAKQAQLPFKINCVLMKGQNDDQIV 182

Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT--IEEGQKIVASLKEK 300
                    ++   P          G  H+     + E  +I+  LK  
Sbjct: 183 PMVKWAKQQDI---PLRFIEFMPLDGDQHWSQQAVVSEA-EILEQLKAH 227


>gi|224536031|ref|ZP_03676570.1| hypothetical protein BACCELL_00895 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522356|gb|EEF91461.1| hypothetical protein BACCELL_00895 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 439

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 56/151 (37%), Gaps = 14/151 (9%)

Query: 83  HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142
           HS           R  LK+   C  +C +C      G  +   ++S   E A        
Sbjct: 137 HSFAPSCSRGDRTRYFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAE 193

Query: 143 QIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
              E++ TG   GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ 
Sbjct: 194 GGKEIVLTGVNIGDFGKTTGETFFNLVKALDEVEGIERYRISS----IEPNLLTDEIIEF 249

Query: 200 LKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229
           +  +        H + P    S+E +  + R
Sbjct: 250 VSHSR---SFMPHFHIPLQSGSDEVLKLMRR 277


>gi|146323515|ref|XP_754142.2| pentafunctional AROM polypeptide [Aspergillus fumigatus Af293]
 gi|129558252|gb|EAL92104.2| pentafunctional AROM polypeptide, putative [Aspergillus fumigatus
           Af293]
          Length = 748

 Score = 37.8 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 41/162 (25%)

Query: 113 FRREMVGSQKGTVLSSK--------DTEAALAYIQEKSQIWEVIFTGGDPLIL------- 157
           F R + G   G+  SS+          +  L ++       E++ +G D + L       
Sbjct: 194 FIRRIYGLSHGSPFSSEVSPEVHTFALQVPLDWLDSYKDP-EILDSGADAITLLIDADVD 252

Query: 158 -SHK-RLQKVLKTLRYIKHVQILRFHSRVPIV-----DPQRINP--ELIQCLKEAGKPVY 208
              + RL+  L       H+  LR HSRVP+V      P++I+    +++ L     P  
Sbjct: 253 GKDQNRLKSQLAR-----HMATLRLHSRVPVVVDLGFSPRKIDTYRSVLEMLLRL-VPDA 306

Query: 209 IAIHANHPYEF------SEEAIAAISRLANA---GIILLSQS 241
           +    + P E       ++ +I  I+    +   GI + SQ+
Sbjct: 307 VTCSLSCPDEIIQWLNTTKGSIKTIATWHQSTPLGIDV-SQT 347


>gi|331090885|ref|ZP_08339729.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 2_1_46FAA]
 gi|330405531|gb|EGG85062.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae
           bacterium 2_1_46FAA]
          Length = 440

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 14/115 (12%)

Query: 97  ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFT 150
             LK+   C  +C +C     R          +L   +   E  +  +   +Q  E    
Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFRSVPMERLLKEAEGLAEQGVKELILVAQ--ETTLY 203

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G D  I   K L K+LK L  +  +Q +R         P+ I  ELIQ +KE  K
Sbjct: 204 GKD--IYGEKSLHKLLKELCKVSGIQWIRI----LYCYPEEITDELIQVMKEEKK 252


>gi|329121946|ref|ZP_08250559.1| radical SAM domain protein [Dialister micraerophilus DSM 19965]
 gi|327467392|gb|EGF12891.1| radical SAM domain protein [Dialister micraerophilus DSM 19965]
          Length = 477

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF  +    +   ++S      A+ ++   S      EV F GG+PL
Sbjct: 101 LNIAHDCNLRCKYCFAGQGGYGKWRMLMSFDVARRAIDFLIAHSGPRKHCEVDFFGGEPL 160

Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
            ++   +Q+ +  +R  +  H +I+R 
Sbjct: 161 -MNWHVIQQTVTYIRQKERKHNKIVRL 186


>gi|320167238|gb|EFW44137.1| molybdenum cofactor synthesis 1 isoform 1 [Capsaspora owczarzaki
           ATCC 30864]
          Length = 517

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 21/120 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C     V  S  G +L++ +    LA +     + ++  TGG+P + 
Sbjct: 47  ISLTERCNLRCVYCMPEHGVELSPNGALLTTDEIIR-LAQLFVSQGVDKIRLTGGEPTVR 105

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQRINPELIQCLKEAGKPVYIAIHAN 214
               L  +++ L  I  ++ +   +   +     PQ         L++AG       H N
Sbjct: 106 KD--LVPLVERLGQIDGLKSIALTTNGIVLGRYLPQ---------LQKAGL-----THLN 149


>gi|317180090|dbj|BAJ57876.1| hypothetical protein HPF32_0294 [Helicobacter pylori F32]
          Length = 418

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       +   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|317177100|dbj|BAJ54889.1| hypothetical protein HPF16_0292 [Helicobacter pylori F16]
          Length = 418

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       +   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|298484173|ref|ZP_07002339.1| 2-methylthioadenine synthetase [Bacteroides sp. D22]
 gi|298269677|gb|EFI11272.1| 2-methylthioadenine synthetase [Bacteroides sp. D22]
          Length = 436

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 70/227 (30%), Gaps = 71/227 (31%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  +      ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G D      + L ++++ +  I  V+ +R H       P     +L + ++E        
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
                           +                L+ I+D+   +  LMR           
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLQLMRRQ--------- 267

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
                         ++ E+  +++   ++++ G+  +   ++  PG 
Sbjct: 268 --------------VSKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE 300


>gi|294792210|ref|ZP_06757358.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 6_1_27]
 gi|294457440|gb|EFG25802.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 6_1_27]
          Length = 321

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L L   C   C +C   E+    +  +LS  +    L        +  V  TGG+PL+
Sbjct: 12  VRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMTILGAF-HHIGVKAVRLTGGEPLL 70

Query: 157 LSHKRLQKVLKTLRY 171
                ++++L  ++ 
Sbjct: 71  YP--HIEELLGRIKE 83


>gi|317132913|ref|YP_004092227.1| MiaB-like tRNA modifying enzyme YliG [Ethanoligenens harbinense
           YUAN-3]
 gi|315470892|gb|ADU27496.1| MiaB-like tRNA modifying enzyme YliG [Ethanoligenens harbinense
           YUAN-3]
          Length = 451

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 13/136 (9%)

Query: 99  LKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           LK+   C  +C +C     R          ++   +  AA    +      +    G D 
Sbjct: 152 LKIAEGCDNHCTYCIIPKLRGRYRSRPLDDLVREAEQLAARGVRELTLVAQDTTRYGTD- 210

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHA 213
           L    + L ++L+    I  +  +R         P+ ++ ELI  +    K V Y+ +  
Sbjct: 211 LSGGKRMLPELLRRFCRIDGLHWVRL----LYCYPEALDDELIDTIASEEKVVPYLDMPI 266

Query: 214 NHPYEFSEEAIAAISR 229
            H    S   + A++R
Sbjct: 267 QH---VSPRVVRAMNR 279


>gi|282850584|ref|ZP_06259963.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula
           ATCC 17745]
 gi|282580077|gb|EFB85481.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula
           ATCC 17745]
          Length = 321

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L L   C   C +C   E+    +  +LS  +    L        +  V  TGG+PL+
Sbjct: 12  VRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMTILGAF-HHIGVKAVRLTGGEPLL 70

Query: 157 LSHKRLQKVLKTLRY 171
                ++++L  ++ 
Sbjct: 71  YP--HIEELLGRIKE 83


>gi|261839141|gb|ACX98906.1| hypothetical protein HPKB_0296 [Helicobacter pylori 52]
          Length = 418

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       +   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|261837731|gb|ACX97497.1| hypothetical protein KHP_0283 [Helicobacter pylori 51]
          Length = 418

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       +   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221


>gi|170289997|ref|YP_001736813.1| radical SAM domain-containing protein [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170174077|gb|ACB07130.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 329

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 6/75 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++  +   C + C +C+    +   +   L  ++    L      S I  + +TGG+
Sbjct: 7   PSWLIWMITASCNLNCPYCYSTHYL---RERPLGREEVMRLLRE-AASSGIKHIDYTGGE 62

Query: 154 PLILSHKRLQKVLKT 168
           PL      + ++L+ 
Sbjct: 63  PLTRRD--ISEILEE 75


>gi|91201841|emb|CAJ74901.1| similar to nirJ/moaA/ppqE family of cofactor synthesis proteins
           [Candidatus Kuenenia stuttgartiensis]
          Length = 359

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 9/88 (10%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
           E  +D +      P  G +      ++  + + C + C+ C+        KG  L S+DT
Sbjct: 3   EYVKDSLSKKGCRPFSGAI------VIWNITNNCNLTCKHCY--AYANQIKGKELGSEDT 54

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSH 159
            + +   ++ S +   I +GG+PL+   
Sbjct: 55  ISLIQQFKQ-SAVKLAILSGGEPLMRKD 81


>gi|298373887|ref|ZP_06983845.1| radical SAM domain-containing protein [Bacteroides sp. 3_1_19]
 gi|298268255|gb|EFI09910.1| radical SAM domain-containing protein [Bacteroides sp. 3_1_19]
          Length = 440

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 30/185 (16%)

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR--REMV 118
           +P KE   I P+  +D     N SPL  I    P RI   +   C + C+ CF       
Sbjct: 83  VPTKESFCI-PDFYKD---KKNLSPLTEIS---PGRIDFVITKHCNLACKHCFEGASPKF 135

Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           G ++  +       +    I     +  +  TGG+P  + +    ++L  L   +H + +
Sbjct: 136 GIREYGIDVFSRIFSEFDRI----NLKTLKITGGEPFTVPN--FDQILLELSK-RHFETI 188

Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-------IH-ANHPYEFSEEAIAAISRL 230
                  + +   I    I+ L+     + I+        H         +     + RL
Sbjct: 189 ------VLTNGMLIKDRDIEILRLGDIHLGISLDGLDSETHDFTRGKGAFDVISRQLLRL 242

Query: 231 ANAGI 235
            +AG+
Sbjct: 243 RDAGV 247


>gi|212696574|ref|ZP_03304702.1| hypothetical protein ANHYDRO_01112 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212676430|gb|EEB36037.1| hypothetical protein ANHYDRO_01112 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 474

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 6/121 (4%)

Query: 59  QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCF 113
           Q +  ++   +L  + ED + D   S  K +  + Y +RI+L       + C   C +C 
Sbjct: 48  QGLSHRDAFVLLSCQEED-LNDEIFSLAKKLKEKFYGNRIVLFAPLYLSNYCVNGCLYCP 106

Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
                 +     LS  +    +  +Q+       + TG DP+    + + + +KT+  IK
Sbjct: 107 YHAKNKTIPRRKLSQDEIRKEVIALQDLGHKRLALETGEDPVNNPIEYVLESIKTIYSIK 166

Query: 174 H 174
           H
Sbjct: 167 H 167


>gi|157829079|ref|YP_001495321.1| hypothetical protein A1G_06820 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165933804|ref|YP_001650593.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rickettsia
           rickettsii str. Iowa]
 gi|229890634|sp|B0BVC7|MIAB_RICRO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890635|sp|A8GTT8|MIAB_RICRS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157801560|gb|ABV76813.1| hypothetical protein A1G_06820 [Rickettsia rickettsii str. 'Sheila
           Smith']
 gi|165908891|gb|ABY73187.1| tRNA 2-methylthioadenosine synthase [Rickettsia rickettsii str.
           Iowa]
          Length = 445

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)

Query: 76  DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           D + +     L      YP      + +   C  +C FC     V         S++ E 
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185

Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
                    +  +V+ +G   ++L               +   L  +LK L  I +++ L
Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239

Query: 179 RFHSRVPI 186
           R+ +  PI
Sbjct: 240 RYTTSHPI 247


>gi|167039016|ref|YP_001662001.1| radical SAM domain-containing protein [Thermoanaerobacter sp. X514]
 gi|300913395|ref|ZP_07130712.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307723590|ref|YP_003903341.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513]
 gi|166853256|gb|ABY91665.1| Radical SAM domain protein [Thermoanaerobacter sp. X514]
 gi|300890080|gb|EFK85225.1| Radical SAM domain protein [Thermoanaerobacter sp. X561]
 gi|307580651|gb|ADN54050.1| Radical SAM domain protein [Thermoanaerobacter sp. X513]
          Length = 427

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 6/72 (8%)

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--I 144
           +GI    P      +   C + C  CF      S K   L+   TE     +++  +  I
Sbjct: 85  EGIQKIGPTIAYFHITQRCNLNCPTCF----TFSPKRNKLNDMPTEKVKEVLRKIKEFGI 140

Query: 145 WEVIFTGGDPLI 156
            EVIF+GG+P +
Sbjct: 141 NEVIFSGGEPFL 152


>gi|37526620|ref|NP_929964.1| hypothetical protein plu2730 [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36786052|emb|CAE15104.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 354

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIW 145
            G   +YP+   +   + C   C+ C             LS  + +  +A+ +     + 
Sbjct: 6   PGYWEQYPNTATVITTYTCNAACKECC--FECNPSVKARLSLDEIKQFIAHSKANFPGLK 63

Query: 146 EVIFTGGDPLILSHKRLQKV 165
            V+F+GG+  +L    ++ +
Sbjct: 64  LVVFSGGECFLLGKDLIEAI 83


>gi|1171709|sp|P24427|NIFB_RHILT RecName: Full=FeMo cofactor biosynthesis protein nifB
          Length = 490

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 12/118 (10%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143
            H Y  R+ L +   C + C +C R+         G     +   +    A+A   E  Q
Sbjct: 59  AHLYFARMHLAVASACNIQCNYCNRKYDCANESRPGVASHRLTPDQALRRAIAVANEVPQ 118

Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQC 199
           +  V   G GD      ++ +  L  + R I  V++    +      P+ +  +L+  
Sbjct: 119 LSVVGIAGPGDA-CYDWRKTKATLIPIAREIPDVKLC-ISTNGLA-LPEHV-DDLVDM 172


>gi|21698998|dbj|BAC02731.1| moaA / nifB / pqqE family [Bacillus licheniformis]
          Length = 385

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 20/180 (11%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           + P  ++ +L   C + C  C        +    L+ K+ +  +  I        ++ TG
Sbjct: 8   KSPFIVIWELTRACELKCLHCRASAQ-NKRDPRELTLKEGKDLIDQIHAMDNPL-LVLTG 65

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--- 208
           GDPL +       +++        + +R  S  P   P  +  E IQ  KE G   +   
Sbjct: 66  GDPL-MRDDVFA-IIEYAVQ----KGVRV-SMTPSATPN-VTREAIQSAKEIGLSRWAFS 117

Query: 209 -------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
                  I  H        +  + AI  +    + L   +V+     D  + +A L+   
Sbjct: 118 LDGPTREIHDHFRGTDGSFDLTMKAIRYIHECHLPLQINTVISAYNIDYLDEMAKLIEEL 177


>gi|119384986|ref|YP_916042.1| molybdenum cofactor biosynthesis protein A [Paracoccus
           denitrificans PD1222]
 gi|166217887|sp|A1B4A2|MOAA_PARDP RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|119374753|gb|ABL70346.1| GTP cyclohydrolase subunit MoaA [Paracoccus denitrificans PD1222]
          Length = 344

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 37/178 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +       + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMQFLPKRDLLTLEELDRLCSAFVG-LGVRKLRVTGGEPLVRR 87

Query: 159 H---------KRLQKVLKTLRYIKHVQIL-RFHS-------RVPIVDPQRINPELIQCLK 201
           +         + L   L  L    +   L RF +       R   V    ++ +    + 
Sbjct: 88  NIMEFFRAMSRHLGAGLDELTLTTNGSQLARFATELADCGVRRVNVSLDTLDEDRFARIT 147

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
             G+                + +  I     AG+ +   +V LKG N+D      L R
Sbjct: 148 RWGR--------------LPQVLQGIEAAKAAGMRVKINTVALKGFNED-----ELFR 186


>gi|332300071|ref|YP_004441992.1| Ribosomal RNA large subunit methyltransferase N [Porphyromonas
           asaccharolytica DSM 20707]
 gi|332177134|gb|AEE12824.1| Ribosomal RNA large subunit methyltransferase N [Porphyromonas
           asaccharolytica DSM 20707]
          Length = 341

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 77/193 (39%), Gaps = 38/193 (19%)

Query: 95  DRILLKLL--HVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           DR  L +     C + C FC    M G Q  G  LS+ +    +  + E +++  ++F G
Sbjct: 100 DRATLCVSSQRGCKMNCLFC----MTGKQGFGANLSASEILNQILSVPEVNELTNIVFMG 155

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEA 203
            G+P+      +  +L+ +R +          +   + P+RI        P L + L+E 
Sbjct: 156 MGEPM----DNIDTLLQVIRCLTD-------PKGLAMSPKRITVSTIGLRPGLERFLEEC 204

Query: 204 GKPVYIAIHANHPYE-FSEEAIAAISRLANAGIILLS-----QSVLLK------GINDDP 251
              + I++H   P E  +   +     LA+   +L       Q  L        G+ND P
Sbjct: 205 TCHLAISLHNPLPEERLAIMPVERAMPLADTVALLRHYDWSRQRRLTFEYIVFSGLNDTP 264

Query: 252 EILANLMRTFVEL 264
             LA L R   +L
Sbjct: 265 RHLAALKRLLSQL 277


>gi|293376256|ref|ZP_06622499.1| MiaB-like protein [Turicibacter sanguinis PC909]
 gi|325845151|ref|ZP_08168460.1| tRNA methylthiotransferase YqeV [Turicibacter sp. HGF1]
 gi|292645148|gb|EFF63215.1| MiaB-like protein [Turicibacter sanguinis PC909]
 gi|325488816|gb|EGC91216.1| tRNA methylthiotransferase YqeV [Turicibacter sp. HGF1]
          Length = 434

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 14/124 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQI----WEVI 148
             R  LK+   C  +C +C      G+ +         +     +     ++        
Sbjct: 142 RTRATLKIQDGCNNFCTYCIIPWARGTVRSQKP-EIVIDQVKQLVANGHCEVVLTGIHTA 200

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
             G D   L      K+L+ L  I  ++ +R  S    ++   +  ++I  +K + K + 
Sbjct: 201 AYGED---LEDYSFGKLLQDLIKIDGLKRIRISS----IEASEMTDDVITAMKMSDK-IV 252

Query: 209 IAIH 212
             +H
Sbjct: 253 NHLH 256


>gi|189485173|ref|YP_001956114.1| hypothetical protein TGRD_170 [uncultured Termite group 1 bacterium
           phylotype Rs-D17]
 gi|238055294|sp|B1GZH1|RIMO_UNCTG RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|170287132|dbj|BAG13653.1| conserved hypothetical protein [uncultured Termite group 1
           bacterium phylotype Rs-D17]
          Length = 439

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 36/149 (24%), Positives = 56/149 (37%), Gaps = 21/149 (14%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDP 154
             LK+   C   C FC    + G  +   +     E+ +  +   ++  I E+I    D 
Sbjct: 147 AYLKIAEGCGHVCSFCIIPALRGRYESRTM-----ESLVDEVAALAESGIKELILIAQDT 201

Query: 155 L-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-Y 208
                 I     L K+L  L  I  ++ +R         P  I   LI+  KE  K   Y
Sbjct: 202 TGYGKDIYGAFVLDKLLVKLSKINGLKWIRL----LYAYPSSITDGLIEVFKEHKKICSY 257

Query: 209 IAIHANHPYEFSEEAIAAISR-LANAGII 236
           + I   H    S+  ++A+ R L   GII
Sbjct: 258 MDIPIQHA---SKNVLSAMKRPLNTPGII 283


>gi|167757163|ref|ZP_02429290.1| hypothetical protein CLORAM_02713 [Clostridium ramosum DSM 1402]
 gi|167703338|gb|EDS17917.1| hypothetical protein CLORAM_02713 [Clostridium ramosum DSM 1402]
          Length = 220

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 97  ILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
                 H C + C +C  R     +    +LS+++    L Y++    +  V  TGG+PL
Sbjct: 24  AAFIRFHYCNLNCSYCDTRYANDSNSNYELLSAQNI---LDYLKANKVVN-VTLTGGEPL 79

Query: 156 ILSHKRLQKVLKTLRY 171
           +  +  +  ++  L  
Sbjct: 80  LQQN--IDYLIDLLLK 93


>gi|24375413|ref|NP_719456.1| biotin synthase [Shewanella oneidensis MR-1]
 gi|24350251|gb|AAN56900.1|AE015824_11 biotin synthase family protein [Shewanella oneidensis MR-1]
 gi|301344403|gb|ADK73962.1| HydE [Shewanella oneidensis]
          Length = 359

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 1/82 (1%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R +++  + C  +C +C  R          LS+++   A+  I E      V+ +G D  
Sbjct: 62  RGIVEFSNHCRNHCHYCGLRTENRQVTRYRLSNEEILNAVDSIAELGLGTVVLQSGDD-F 120

Query: 156 ILSHKRLQKVLKTLRYIKHVQI 177
             S  R+  ++  ++   ++ I
Sbjct: 121 NYSGNRISTLITEIKRHHNLAI 142


>gi|17987302|ref|NP_539936.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
           1 str. 16M]
 gi|225852463|ref|YP_002732696.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis
           ATCC 23457]
 gi|256044623|ref|ZP_05447527.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
           1 str. Rev.1]
 gi|256113501|ref|ZP_05454335.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
           3 str. Ether]
 gi|256264042|ref|ZP_05466574.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
           2 str. 63/9]
 gi|260563974|ref|ZP_05834460.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
           1 str. 16M]
 gi|265991048|ref|ZP_06103605.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
           1 str. Rev.1]
 gi|265994883|ref|ZP_06107440.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
           3 str. Ether]
 gi|24211991|sp|Q8YGY6|MOAA_BRUME RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|254811537|sp|C0RIT4|MOAA_BRUMB RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|17982982|gb|AAL52200.1| molybdenum cofactor biosynthesis protein a [Brucella melitensis bv.
           1 str. 16M]
 gi|225640828|gb|ACO00742.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis
           ATCC 23457]
 gi|260153990|gb|EEW89082.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
           1 str. 16M]
 gi|262765996|gb|EEZ11785.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
           3 str. Ether]
 gi|263001832|gb|EEZ14407.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
           1 str. Rev.1]
 gi|263094229|gb|EEZ18106.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv.
           2 str. 63/9]
          Length = 344

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            K +  ++  L        +  + +    S++      R   EL  C     + + +++ 
Sbjct: 86  RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137

Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
             +P +F               I     AGI +   +V LK  ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182


>gi|326329949|ref|ZP_08196263.1| molybdenum cofactor biosynthesis protein A [Nocardioidaceae
           bacterium Broad-1]
 gi|325952157|gb|EGD44183.1| molybdenum cofactor biosynthesis protein A [Nocardioidaceae
           bacterium Broad-1]
          Length = 339

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 71/194 (36%), Gaps = 42/194 (21%)

Query: 83  HSPLKGIVHRYPDR-------ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDT 131
            SP   +  R  DR       + + L   C + C +C        + G +   VL+  + 
Sbjct: 3   TSPTDQVQQRLVDRFGRVATDLRVSLTDRCNLRCTYCMPPEGLDWLPGDE---VLTDDEV 59

Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
              +     +  + EV FTGG+PL+   + L  ++   R +     L   +         
Sbjct: 60  VRLIGVATGQLGVREVRFTGGEPLV--RRGLVSIVARTREVAPDAELSITTNAL------ 111

Query: 192 INPELIQC---LKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI-----------I 236
               L +    L EAG   V +++ +  P  F+E       RL +               
Sbjct: 112 ---GLARMAGSLAEAGLDRVNVSLDSIRPDTFAEITRR--DRLHDVVAGLEAAAEAGLGP 166

Query: 237 LLSQSVLLKGINDD 250
           +   +VLL+G+NDD
Sbjct: 167 IKINAVLLRGVNDD 180


>gi|254693681|ref|ZP_05155509.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 3
           str. Tulya]
 gi|261213948|ref|ZP_05928229.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 3
           str. Tulya]
 gi|260915555|gb|EEX82416.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 3
           str. Tulya]
          Length = 344

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            K +  ++  L        +  + +    S++      R   EL  C     + + +++ 
Sbjct: 86  RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137

Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
             +P +F               I     AGI +   +V LK  ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182


>gi|288940181|ref|YP_003442421.1| MiaB-like tRNA modifying enzyme [Allochromatium vinosum DSM 180]
 gi|288895553|gb|ADC61389.1| MiaB-like tRNA modifying enzyme [Allochromatium vinosum DSM 180]
          Length = 469

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 18/123 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  +K+   C   C FC   +  G ++   L    ++ E       + S I EV+ TG
Sbjct: 161 RQRAFVKIQDGCRYQCTFCVTTQARGPERSRPLPEIVREVERF-----QDSGIREVVLTG 215

Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                   D   L    L  +++ L     +  LR  S  P   P+R             
Sbjct: 216 VHLGGYGAD---LGTD-LTHLIERLLNETAIPRLRLGSLEPWDLPERFWSLFADRRLMPH 271

Query: 205 KPV 207
             +
Sbjct: 272 LHL 274


>gi|228914502|ref|ZP_04078111.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228844821|gb|EEM89863.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
          Length = 383

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 15  PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 71  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 121

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H        +  + AI  L    I +   +V+     D  E +A L+  
Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 181

Query: 261 F 261
            
Sbjct: 182 L 182


>gi|225627438|ref|ZP_03785475.1| molybdenum cofactor biosynthesis protein A [Brucella ceti str.
           Cudo]
 gi|254706840|ref|ZP_05168668.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
           M163/99/10]
 gi|254710051|ref|ZP_05171862.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
           B2/94]
 gi|256031546|ref|ZP_05445160.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
           M292/94/1]
 gi|256159681|ref|ZP_05457434.1| molybdenum cofactor biosynthesis protein A [Brucella ceti
           M490/95/1]
 gi|256254949|ref|ZP_05460485.1| molybdenum cofactor biosynthesis protein A [Brucella ceti B1/94]
 gi|260168678|ref|ZP_05755489.1| molybdenum cofactor biosynthesis protein A [Brucella sp. F5/99]
 gi|261222132|ref|ZP_05936413.1| molybdenum cofactor biosynthesis protein A [Brucella ceti B1/94]
 gi|261314305|ref|ZP_05953502.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
           M163/99/10]
 gi|261317598|ref|ZP_05956795.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
           B2/94]
 gi|261758152|ref|ZP_06001861.1| molybdenum cofactor biosynthesis protein A [Brucella sp. F5/99]
 gi|265988632|ref|ZP_06101189.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
           M292/94/1]
 gi|265998097|ref|ZP_06110654.1| molybdenum cofactor biosynthesis protein A [Brucella ceti
           M490/95/1]
 gi|225617443|gb|EEH14488.1| molybdenum cofactor biosynthesis protein A [Brucella ceti str.
           Cudo]
 gi|260920716|gb|EEX87369.1| molybdenum cofactor biosynthesis protein A [Brucella ceti B1/94]
 gi|261296821|gb|EEY00318.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
           B2/94]
 gi|261303331|gb|EEY06828.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
           M163/99/10]
 gi|261738136|gb|EEY26132.1| molybdenum cofactor biosynthesis protein A [Brucella sp. F5/99]
 gi|262552565|gb|EEZ08555.1| molybdenum cofactor biosynthesis protein A [Brucella ceti
           M490/95/1]
 gi|264660829|gb|EEZ31090.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis
           M292/94/1]
          Length = 344

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            K +  ++  L        +  + +    S++      R   EL  C     + + +++ 
Sbjct: 86  RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137

Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
             +P +F               I     AGI +   +V LK  ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182


>gi|294673381|ref|YP_003573997.1| MiaB family RNA modification enzyme [Prevotella ruminicola 23]
 gi|294472539|gb|ADE81928.1| RNA modification enzyme, MiaB family [Prevotella ruminicola 23]
          Length = 462

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 7/120 (5%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C      G  +   ++S   +A  A  +   +I       GD
Sbjct: 170 RTRYFLKVQDGCDYFCTYCTIPYARGFSRNPTIASLVAQAQEAAAEGGKEIVLTGVNIGD 229

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
               + ++   ++K L  ++ +Q  R  S    ++P  I+ ELI+   ++        H 
Sbjct: 230 FGKTTGEKFIDLVKALDGVEGIQRYRISS----LEPDLISDELIEYCAKSR---AFMPHF 282


>gi|254714051|ref|ZP_05175862.1| molybdenum cofactor biosynthesis protein A [Brucella ceti
           M644/93/1]
 gi|254716892|ref|ZP_05178703.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M13/05/1]
 gi|261218696|ref|ZP_05932977.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M13/05/1]
 gi|261321806|ref|ZP_05961003.1| molybdenum cofactor biosynthesis protein A [Brucella ceti
           M644/93/1]
 gi|260923785|gb|EEX90353.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M13/05/1]
 gi|261294496|gb|EEX97992.1| molybdenum cofactor biosynthesis protein A [Brucella ceti
           M644/93/1]
          Length = 344

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            K +  ++  L        +  + +    S++      R   EL  C     + + +++ 
Sbjct: 86  RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137

Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
             +P +F               I     AGI +   +V LK  ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182


>gi|311233095|gb|ADP85949.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1]
          Length = 393

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 34/198 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
            ++   C + C+ C     +    G   +    + A A I     +    +IFTGGDP++
Sbjct: 51  WEVTRSCNLACKHCRAEAHMEPYPGEFST----DEAKALIDTFPDVGNPIIIFTGGDPMM 106

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKPVYIAIHAN 214
                    +  L      + LR      ++ P    I PE  Q +K +G     +I  +
Sbjct: 107 RGD------VYELIAYATDKGLRC-----VMSPNGTLITPEHAQRMKASGVQ-RCSISID 154

Query: 215 HPYEFSEEAI-----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
            P   S +A              I  L +AGI     + + +   D+     ++ +    
Sbjct: 155 GPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTR---DNLHSFKDIFKLCER 211

Query: 264 LRIKPYYLHHPDLAAGTS 281
           +    +++         +
Sbjct: 212 IGAVAWHIFLLVPTGRAA 229


>gi|148264555|ref|YP_001231261.1| TatD family hydrolase [Geobacter uraniireducens Rf4]
 gi|146398055|gb|ABQ26688.1| hydrolase, TatD family [Geobacter uraniireducens Rf4]
          Length = 462

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQEKSQIWE 146
           I +R  + + L + + C   C FC + E    +   +L   + +    +A I       E
Sbjct: 269 IAYRIRNSLYLNITNRCSNRCSFCAKFEDFTVKGHYLLLDHEPDFSEVMAAIAAHKGYDE 328

Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           V+F G G+PL L    +++V   L+       +R ++
Sbjct: 329 VVFCGYGEPL-LRLDLIKEVAAALKKQGM--RIRINT 362


>gi|120603171|ref|YP_967571.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|120563400|gb|ABM29144.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4]
          Length = 405

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 34/198 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
            ++   C + C+ C     +    G   +    + A A I     +    +IFTGGDP++
Sbjct: 63  WEVTRSCNLACKHCRAEAHMEPYPGEFST----DEAKALIDTFPDVGNPIIIFTGGDPMM 118

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKPVYIAIHAN 214
                    +  L      + LR      ++ P    I PE  Q +K +G     +I  +
Sbjct: 119 RGD------VYELIAYATDKGLRC-----VMSPNGTLITPEHAQRMKASGVQ-RCSISID 166

Query: 215 HPYEFSEEAI-----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
            P   S +A              I  L +AGI     + + +   D+     ++ +    
Sbjct: 167 GPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTR---DNLHSFKDIFKLCER 223

Query: 264 LRIKPYYLHHPDLAAGTS 281
           +    +++         +
Sbjct: 224 IGAVAWHIFLLVPTGRAA 241


>gi|46579268|ref|YP_010076.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448682|gb|AAS95335.1| radical SAM domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
          Length = 367

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 34/198 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
            ++   C + C+ C     +    G   +    + A A I     +    +IFTGGDP++
Sbjct: 25  WEVTRSCNLACKHCRAEAHMEPYPGEFST----DEAKALIDTFPDVGNPIIIFTGGDPMM 80

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKPVYIAIHAN 214
                    +  L      + LR      ++ P    I PE  Q +K +G     +I  +
Sbjct: 81  RGD------VYELIAYATDKGLRC-----VMSPNGTLITPEHAQRMKASGVQ-RCSISID 128

Query: 215 HPYEFSEEAI-----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263
            P   S +A              I  L +AGI     + + +   D+     ++ +    
Sbjct: 129 GPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTR---DNLHSFKDIFKLCER 185

Query: 264 LRIKPYYLHHPDLAAGTS 281
           +    +++         +
Sbjct: 186 IGAVAWHIFLLVPTGRAA 203


>gi|23501841|ref|NP_697968.1| molybdenum cofactor biosynthesis protein A [Brucella suis 1330]
 gi|161618912|ref|YP_001592799.1| molybdenum cofactor biosynthesis protein A [Brucella canis ATCC
           23365]
 gi|163843226|ref|YP_001627630.1| molybdenum cofactor biosynthesis protein A [Brucella suis ATCC
           23445]
 gi|254701716|ref|ZP_05163544.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 5
           str. 513]
 gi|254704258|ref|ZP_05166086.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 3
           str. 686]
 gi|256369383|ref|YP_003106891.1| molybdenum cofactor biosynthesis protein A [Brucella microti CCM
           4915]
 gi|261752267|ref|ZP_05995976.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 5
           str. 513]
 gi|261754926|ref|ZP_05998635.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 3
           str. 686]
 gi|38258159|sp|Q8G0X4|MOAA_BRUSU RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|189028683|sp|A9MAX5|MOAA_BRUC2 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|189028684|sp|B0CLT0|MOAA_BRUSI RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|23347777|gb|AAN29883.1| molybdenum cofactor biosynthesis protein A [Brucella suis 1330]
 gi|161335723|gb|ABX62028.1| Molybdenum cofactor biosynthesis protein A [Brucella canis ATCC
           23365]
 gi|163673949|gb|ABY38060.1| molybdenum cofactor biosynthesis protein A [Brucella suis ATCC
           23445]
 gi|255999543|gb|ACU47942.1| molybdenum cofactor biosynthesis protein A [Brucella microti CCM
           4915]
 gi|261742020|gb|EEY29946.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 5
           str. 513]
 gi|261744679|gb|EEY32605.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 3
           str. 686]
          Length = 344

 Score = 37.8 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            K +  ++  L        +  + +    S++      R   EL  C     + + +++ 
Sbjct: 86  RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137

Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
             +P +F               I     AGI +   +V LK  ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182


>gi|237709718|ref|ZP_04540199.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 9_1_42FAA]
 gi|229456354|gb|EEO62075.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 9_1_42FAA]
          Length = 498

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 39/192 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156
             L + C  +C++C            + S   T+  +  I+E    Q+ +V   GG+  +
Sbjct: 146 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 200

Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212
               ++  +LK L  R I         +++P+        +L+Q ++E G    V I++ 
Sbjct: 201 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 249

Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261
           A H    +           E +  +  L ++G+     SVL    N    +LA L+    
Sbjct: 250 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQLNVLAELLHELS 308

Query: 262 -----VELRIKP 268
                 + RI P
Sbjct: 309 HLKHIRDWRIIP 320


>gi|254518526|ref|ZP_05130582.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA]
 gi|226912275|gb|EEH97476.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA]
          Length = 451

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
             ED   D  H  +      Y   + L ++H C + C++CF  E   +    V+S +  +
Sbjct: 75  YSEDKYEDIAHGSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYNGHKGVMSLETAK 132

Query: 133 AALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIKHV--QILRF 180
            A+ Y+ ++S      E+   GG+P  +    +++++K  R  +    + +RF
Sbjct: 133 KAIDYVVKRSGPRRNIEIDLFGGEP-TMIMDTVKEIIKYARENEKEWKKNIRF 184


>gi|169831334|ref|YP_001717316.1| hypothetical protein Daud_1173 [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638178|gb|ACA59684.1| protein of unknown function DUF512 [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 451

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 15/92 (16%)

Query: 192 INPELIQCLKEAGK-PVYIAIHANHP---YEFSEEAIA-----AISRLANAGIILLSQSV 242
           ++   ++ +      P+Y+++H  +P           A      +  L  AGI + +Q V
Sbjct: 126 VDERDLRRIAGQRLSPLYVSVHTTNPALRRRLMGHPRAGGIMGQLRLLKAAGIEVHTQVV 185

Query: 243 LLKGIND------DPEILANLMRTFVELRIKP 268
           L  G+ND        + LA L  +   + + P
Sbjct: 186 LCPGLNDGDELSRTVKDLATLWPSVQSVGVVP 217


>gi|170754837|ref|YP_001782699.1| radical SAM domain-containing protein [Clostridium botulinum B1
           str. Okra]
 gi|169120049|gb|ACA43885.1| radical SAM domain protein [Clostridium botulinum B1 str. Okra]
          Length = 455

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF  E     K  ++S +  + A+ ++ EKS      EV   GG+PL
Sbjct: 99  LNIAHDCNLRCKYCFADEGEYKGKRELMSPEVGKKAIDFVIEKSGPRKNIEVDLFGGEPL 158

Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
           +     ++++++  +  +  H + +RF
Sbjct: 159 MA-FSTIKEIVEYAKEQEEKHNKTIRF 184


>gi|149174199|ref|ZP_01852827.1| molybdopterin cofactor synthesis protein A [Planctomyces maris DSM
           8797]
 gi|148847179|gb|EDL61514.1| molybdopterin cofactor synthesis protein A [Planctomyces maris DSM
           8797]
          Length = 333

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/95 (18%), Positives = 43/95 (45%), Gaps = 7/95 (7%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156
           + +   C + C +C   E V     + + S   E  + +I+      + ++  TGG+PL+
Sbjct: 20  ISVTDRCNIRCFYCMPSEDVQFVHRSKIMS--FEEIVRFIRLVVPLGVDKIRLTGGEPLV 77

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191
              K + +++K +  I  ++ +   +   +  PQ+
Sbjct: 78  --RKNIPELVKMIADIPGIKDIGITTNGIL-LPQQ 109


>gi|256545277|ref|ZP_05472642.1| thiazole biosynthesis protein ThiH [Anaerococcus vaginalis ATCC
           51170]
 gi|256399104|gb|EEU12716.1| thiazole biosynthesis protein ThiH [Anaerococcus vaginalis ATCC
           51170]
          Length = 474

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 5/102 (4%)

Query: 78  IGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132
           + +   S  K +  + Y +RI+L       + C   C +C       +     LS  +  
Sbjct: 66  LNEEIFSLAKKLKEKFYGNRIVLFAPLYLSNYCVNGCLYCPYHAKNKTIPRRKLSQDEIR 125

Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
             +  +Q+       + TG DP+      + + +KT+  IKH
Sbjct: 126 KEVIALQDLGHKRLALETGEDPVNNPIDYVLESIKTIYSIKH 167


>gi|255011267|ref|ZP_05283393.1| hypothetical protein Bfra3_19146 [Bacteroides fragilis 3_1_12]
 gi|313149079|ref|ZP_07811272.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313137846|gb|EFR55206.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 439

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C        +      +   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTVASLVEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKSTGETFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEYVSTSR---SFM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|239946801|ref|ZP_04698554.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsia endosymbiont
           of Ixodes scapularis]
 gi|239921077|gb|EER21101.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsia endosymbiont
           of Ixodes scapularis]
          Length = 464

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)

Query: 76  DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           D + +     L      YP      + +   C  +C FC     V         S++ E 
Sbjct: 151 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 203

Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
                    +  +V+ +G   ++L               +   L  +LK L  I +++ L
Sbjct: 204 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 257

Query: 179 RFHSRVPI 186
           R+ +  PI
Sbjct: 258 RYTTSHPI 265


>gi|189462612|ref|ZP_03011397.1| hypothetical protein BACCOP_03304 [Bacteroides coprocola DSM 17136]
 gi|189430773|gb|EDU99757.1| hypothetical protein BACCOP_03304 [Bacteroides coprocola DSM 17136]
          Length = 438

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C        +      +   E A           E++ TG  
Sbjct: 148 RTRYFLKVQDGCDYFCSYCTI-PFARGRSRNGKIADLVEQARQ--VAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  + +     
Sbjct: 205 IGDFGKTTGESFFDLVKALDAVEGIERYRISS----IEPNLLTDEIIEYVARSRR---FM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|196033604|ref|ZP_03101016.1| putative coenzyme PQQ synthesis protein [Bacillus cereus W]
 gi|218903027|ref|YP_002450861.1| putative coenzyme PQQ synthesis protein [Bacillus cereus AH820]
 gi|228926971|ref|ZP_04090037.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|195994038|gb|EDX57994.1| putative coenzyme PQQ synthesis protein [Bacillus cereus W]
 gi|218538427|gb|ACK90825.1| putative coenzyme PQQ synthesis protein [Bacillus cereus AH820]
 gi|228832706|gb|EEM78277.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
          Length = 377

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 9   PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 64

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 65  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 115

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H        +  + AI  L    I +   +V+     D  E +A L+  
Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 175

Query: 261 F 261
            
Sbjct: 176 L 176


>gi|153810776|ref|ZP_01963444.1| hypothetical protein RUMOBE_01160 [Ruminococcus obeum ATCC 29174]
 gi|149833172|gb|EDM88254.1| hypothetical protein RUMOBE_01160 [Ruminococcus obeum ATCC 29174]
          Length = 445

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 16/114 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------G 151
           LK+   C  +C +C    + G  K   +  +       Y+  +  + E+I         G
Sbjct: 148 LKIAEGCDKHCTYCIIPSLRG--KFRSVPEERLLKQAEYMASQ-GVRELILVAQETTVYG 204

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            D  +   K L  +LK L  IK ++ +R    V    P+ I  ELIQ +KE  K
Sbjct: 205 TD--LYGKKTLHILLKKLCQIKGIRWIR----VLYCYPEEIYDELIQVMKEEKK 252


>gi|269926079|ref|YP_003322702.1| RNA modification enzyme, MiaB family [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789739|gb|ACZ41880.1| RNA modification enzyme, MiaB family [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 432

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 22/143 (15%), Positives = 54/143 (37%), Gaps = 22/143 (15%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF------ 149
              + ++  C  +C FC      G ++   +   D    + ++     + EV        
Sbjct: 136 TAFVPVIMGCNKFCTFCVVPYRRGRERSIPIP--DVVEEVRFL-ADRGVKEVTLLGQTIN 192

Query: 150 -TGGDPLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
             G D   L ++  L  +L  +  +  ++ +RF        P+ +  +++  + +  K  
Sbjct: 193 HYGKD---LPNRPDLADLLYAVHEVPGIERIRF----LTSYPRTMTDKILHAVADLPK-- 243

Query: 208 YIAIHANHPYEF-SEEAIAAISR 229
            +  H N P++    + + A+ R
Sbjct: 244 -VCEHINIPFQAGDNDVLRAMRR 265


>gi|255693887|ref|ZP_05417562.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
 gi|260620292|gb|EEX43163.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565]
          Length = 434

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 14/113 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G      +   +    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISKPI--DEILDEVRYLVSQGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G D  +   + L ++++ +  I  V+ +R H       P     +L + ++E 
Sbjct: 196 GVD--LYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRER 242


>gi|163782835|ref|ZP_02177831.1| hypothetical protein HG1285_15906 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881956|gb|EDP75464.1| hypothetical protein HG1285_15906 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 454

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 6/76 (7%)

Query: 95  DRILLKLLHVCPVYCRFCFRRE----MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
           +++ + L + C ++C FC R      MV             E  + YI + +   E++F 
Sbjct: 266 NKLYVNLTNKCNLHCVFCQRERERNFMVKGYWVWTTRDPSVEEVIRYIGDPTGYEEIVFC 325

Query: 151 G-GDPLILSHKRLQKV 165
           G G+P  L    L+++
Sbjct: 326 GYGEP-TLRFSALKEI 340


>gi|219852013|ref|YP_002466445.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
 gi|219546272|gb|ACL16722.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
          Length = 377

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 4/68 (5%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           + P    + +  +C   CR+C       +   +   + + +  +  +     I  + F+G
Sbjct: 23  KRPTYAYISITSLCNSRCRYCDSW---KNNGESEPDTDEWKKIIDEL-VNLGIVTLTFSG 78

Query: 152 GDPLILSH 159
           G+P I   
Sbjct: 79  GEPFIRKD 86


>gi|148560684|ref|YP_001258926.1| molybdenum cofactor biosynthesis protein A [Brucella ovis ATCC
           25840]
 gi|166217239|sp|A5VQC9|MOAA_BRUO2 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|148371941|gb|ABQ61920.1| molybdenum cofactor biosynthesis protein A [Brucella ovis ATCC
           25840]
          Length = 344

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            K +  ++  L        +  + +    S++      R   EL  C     + + +++ 
Sbjct: 86  RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137

Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
             +P +F               I     AGI +   +V LK  ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182


>gi|332140865|ref|YP_004426603.1| molybdenum cofactor biosynthesis protein A [Alteromonas macleodii
           str. 'Deep ecotype']
 gi|327550887|gb|AEA97605.1| molybdenum cofactor biosynthesis protein A [Alteromonas macleodii
           str. 'Deep ecotype']
          Length = 322

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 27/181 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C   C++C      G      +S  + +  L    +     +V  TGG+P  L 
Sbjct: 15  LSVTEACNFRCQYCLPDGYEGPSSDQFMSLNEIDTLLKAFAK-LGTSKVRLTGGEP-TLR 72

Query: 159 HKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANH 215
              L    +      IK V +    +R+     ++   +     K+AG   V ++I +  
Sbjct: 73  RDFLDILHLTSNTPGIKRVAMTTHGARM-----EKFAHQW----KDAGLHQVNVSIDSLD 123

Query: 216 PYEFSE--------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           P +F+           +  +    +AG+ +   SVLL   +D       L R    L+  
Sbjct: 124 PRQFAAITGQDKLKAVLRGLDSAIDAGLDVKVNSVLLNDFSDS-----RLHRFLAWLKDM 178

Query: 268 P 268
           P
Sbjct: 179 P 179


>gi|187779452|ref|ZP_02995925.1| hypothetical protein CLOSPO_03048 [Clostridium sporogenes ATCC
           15579]
 gi|187773077|gb|EDU36879.1| hypothetical protein CLOSPO_03048 [Clostridium sporogenes ATCC
           15579]
          Length = 292

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 20/118 (16%)

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I ++ FTGG+PLIL    + K++     I  ++ +   +         +  + ++ LK+A
Sbjct: 32  IDKIRFTGGEPLILKD--IDKLIYNTSKISSIKDIAMTTNA------TLLEDRVEDLKKA 83

Query: 204 GKPVYIAIHANHPYE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
           G    + I  +   E      +      +   +I +  + GI  +   +V++KGINDD
Sbjct: 84  GLK-RVNISLDSLKEDRFKSITRGGDINKVFKSIEKSLSIGIRPIKINTVIMKGINDD 140


>gi|197116415|ref|YP_002136842.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197085775|gb|ACH37046.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
          Length = 358

 Score = 37.8 bits (87), Expect = 2.6,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 77/221 (34%), Gaps = 42/221 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           P  I  +    C + C  C    E+  S+     S+++ +  L  I + S+   V+ +GG
Sbjct: 7   PKWIAWETTQRCNLKCVHCRCSSELTSSEGD--FSTEEGKKLLKEISDFSKP-VVVLSGG 63

Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAG-KPVYI 209
           +PL+      L +   +L             R+    +   +  E+ + +K+A  K V +
Sbjct: 64  EPLMRPDIFELAEYGTSL-----------GLRMCMASNGSLVTDEVCEKMKKADIKMVSL 112

Query: 210 A-------IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           +       +H N    P  F     AA       G   L  S   K    +   +A+  +
Sbjct: 113 SLDGSTAEVHDNFRQCPGSFEGVLRAA-ELFRKHGQKFLINSSFTK---RNQHDIASTFK 168

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
               L    +Y+             +    G+ I++ L  K
Sbjct: 169 VAKSLGATAWYMFM----------IVPTGRGEDIMSELISK 199


>gi|298674451|ref|YP_003726201.1| radical SAM domain-containing protein [Methanohalobium evestigatum
           Z-7303]
 gi|298287439|gb|ADI73405.1| Radical SAM domain protein [Methanohalobium evestigatum Z-7303]
          Length = 405

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 36/162 (22%)

Query: 92  RY-PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVI 148
           +Y P+ +  ++   C   C  C      G +    +    +  + AL         + + 
Sbjct: 102 KYIPETVSFEITRECKCNCEHCVVS---GGEGDLDVDTIKRTIDEALD-----MGAFIIT 153

Query: 149 FTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           FT GDPL+   + + +++  +   R I  V I    + +         PE  + LKE+G 
Sbjct: 154 FTEGDPLL--REEIFELIDYVDKDRAI--VNIFTPGTEL--------TPETAKRLKESGL 201

Query: 206 PVYIAIHANHPYEFSEEAIA----------AISRLANAGIIL 237
              +    +   E  +              AI    +AG+++
Sbjct: 202 HNLLISIYSTDSEKHDSVRRLDGAHEMALNAIKNAVDAGLLV 243


>gi|171186368|ref|YP_001795287.1| radical SAM domain-containing protein [Thermoproteus neutrophilus
           V24Sta]
 gi|170935580|gb|ACB40841.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta]
          Length = 347

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 33/185 (17%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQI 144
           G+V R  + + ++   VC + C FC       S+        + EA LA ++E      +
Sbjct: 22  GVVDRGTNVLEVRPTSVCALSCVFCSVNAGPASRARWAEYEVEVEALLAALEEVVRYKGV 81

Query: 145 WEV---IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
            +V   +   GDP       L ++++  + IK V ++   +R+       ++   ++ L 
Sbjct: 82  DDVEVHVDGMGDPGNYP--HLAELIEGAKSIKGVALVSMQTRL-----YMLDERKLEELA 134

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
           +AG                    A   RLA A                D E +  L+   
Sbjct: 135 KAGLDRINV-------SIDALDRALAKRLAGAEWY-------------DVEKVLRLVEAA 174

Query: 262 VELRI 266
           +   I
Sbjct: 175 LGAGI 179


>gi|220929087|ref|YP_002505996.1| radical SAM protein [Clostridium cellulolyticum H10]
 gi|219999415|gb|ACL76016.1| Radical SAM domain protein [Clostridium cellulolyticum H10]
          Length = 438

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/114 (14%), Positives = 46/114 (40%), Gaps = 8/114 (7%)

Query: 57  ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116
            RQ I + ++ +      +D   +   + +  +    P  +  ++   C + C  C+   
Sbjct: 69  FRQMISKVKDWDTAESLWKDSSDNKEIASIPALSA--PLDLSWEVTKRCNLNCHHCYNDS 126

Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170
              + +  +   +   + +  +    ++  ++ TGG+PL+     L+ ++  LR
Sbjct: 127 HAINYEPNL---EQIHSVVNELSST-RLRNIVVTGGEPLMRED--LKTIIGWLR 174


>gi|308063147|gb|ADO05034.1| hypothetical protein HPSAT_01425 [Helicobacter pylori Sat464]
          Length = 418

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQITGLKRIRIGS 221


>gi|241068677|ref|XP_002408506.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215492494|gb|EEC02135.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 446

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)

Query: 76  DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           D + +     L      YP      + +   C  +C FC     V         S++ E 
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185

Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
                    +  +V+ +G   ++L               +   L  +LK L  I +++ L
Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239

Query: 179 RFHSRVPI 186
           R+ +  PI
Sbjct: 240 RYTTSHPI 247


>gi|206896314|ref|YP_002246510.1| radical SAM domain protein [Coprothermobacter proteolyticus DSM
           5265]
 gi|206738931|gb|ACI18009.1| radical SAM domain protein [Coprothermobacter proteolyticus DSM
           5265]
          Length = 348

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 29/77 (37%), Gaps = 1/77 (1%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R +++  + C   C +C  R          ++ ++       I  +     V+ +G DP 
Sbjct: 53  RGIIEFSNYCSSNCLYCGIRAQNKHVHRYRMTPQEIVDRAQIISAQGIKTVVLQSGEDPF 112

Query: 156 ILSHKRLQKVLKTLRYI 172
               + L  ++  ++ +
Sbjct: 113 YTK-ETLGDIISAIQSL 128


>gi|15678091|ref|NP_275205.1| molybdenum cofactor biosynthesis A (MoaA) related protein
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2621099|gb|AAB84569.1| molybdenum cofactor biosynthesis A (MoaA) related protein
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 250

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 6/87 (6%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           I+  L   C   CR+CF             S       +  I++++ +  V+  GG+P  
Sbjct: 37  IITVLTPTCNFRCRYCF----FKPSGCMNHSPDRIADLIQRIRDETGVERVLIAGGEP-T 91

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSR 183
           L  + L ++ + L    HV I    +R
Sbjct: 92  LQ-EDLPELTEILAGDFHVTISPNGTR 117


>gi|15611340|ref|NP_222991.1| hypothetical protein jhp0270 [Helicobacter pylori J99]
 gi|11387381|sp|Q9ZMF0|Y285_HELPJ RecName: Full=Putative methylthiotransferase jhp_0270
 gi|4154794|gb|AAD05851.1| putative [Helicobacter pylori J99]
          Length = 418

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQITGLKRIRIGS 221


>gi|284048720|ref|YP_003399059.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
 gi|283952941|gb|ADB47744.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731]
          Length = 332

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 10/110 (9%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      CP  C FC +R + G    ++  + +  E  L +++      E+ F GG    
Sbjct: 5   IFIPHAGCPHLCSFCNQRTISGEGDSSLAGARRQMENLLGWVRPDPA-NELAFYGGSFTA 63

Query: 157 LSHKRLQKVLKTLRYIKHVQI---LRFHSRVPIVDPQRINPELIQCLKEA 203
           L   R + +L      +   +   LR  +R     P  I PE++  L+  
Sbjct: 64  LDPDRQEALLDLAETWRGQGLCGPLRLSTR-----PDAITPEILDRLRAH 108


>gi|224543515|ref|ZP_03684054.1| hypothetical protein CATMIT_02724 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523642|gb|EEF92747.1| hypothetical protein CATMIT_02724 [Catenibacterium mitsuokai DSM
           15897]
          Length = 439

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 22/114 (19%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
              EL  L   R   +  N+ SP       Y    ++     C   C +CF       +K
Sbjct: 65  DVNELTFLESLRMRTLASNDDSP-----SYY----IICPTTGCNARCYYCF-------EK 108

Query: 123 GTVLSSKDTEAA---LAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRY 171
           G V    + + A     YI +      ++    GG+PL L  K +  +++ L  
Sbjct: 109 GAVQKRMNLDTARAVAEYIFQNHDPEHLVIQWFGGEPL-LEPKTISYIVEYLSS 161


>gi|303243581|ref|ZP_07329923.1| Radical SAM domain protein [Methanothermococcus okinawensis IH1]
 gi|302486142|gb|EFL49064.1| Radical SAM domain protein [Methanothermococcus okinawensis IH1]
          Length = 466

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 34/75 (45%), Gaps = 5/75 (6%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           ++  + + C + C+ C+     G      L++++    +  I   S +  + F+GG+PL+
Sbjct: 115 VVWDVTYACNLRCKHCY--ANAGKPLEDELNTEEALKTID-ILANSGVVAIAFSGGEPLM 171

Query: 157 LSHKRLQKVLKTLRY 171
                L +++   + 
Sbjct: 172 RKD--LFELIDRAKD 184


>gi|295084184|emb|CBK65707.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides
           xylanisolvens XB1A]
          Length = 436

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 70/227 (30%), Gaps = 71/227 (31%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  +      ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G D      + L ++++ +  I  V+ +R H       P     +L + ++E        
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
                           +                L+ I+D+   +  LMR           
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLQLMRRQ--------- 267

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
                         ++ E+  +++   ++++ G+  +   ++  PG 
Sbjct: 268 --------------VSKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE 300


>gi|300087902|ref|YP_003758424.1| molybdenum cofactor biosynthesis protein A [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527635|gb|ADJ26103.1| molybdenum cofactor biosynthesis protein A [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 329

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/84 (15%), Positives = 37/84 (44%), Gaps = 3/84 (3%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C    +   +   +LS ++    ++ +  +  +  +  TGG+PL+  
Sbjct: 23  ISVTDRCNLRCMYCSGASVDHLRHNDILSYEEIAQ-ISRVAAELGVNHIRLTGGEPLV-- 79

Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182
              L  +++ L  I  ++ +   +
Sbjct: 80  RPGLSNLIELLTAIPGIEDISLTT 103


>gi|269837050|ref|YP_003319278.1| RNA modification enzyme, MiaB family [Sphaerobacter thermophilus
           DSM 20745]
 gi|269786313|gb|ACZ38456.1| RNA modification enzyme, MiaB family [Sphaerobacter thermophilus
           DSM 20745]
          Length = 460

 Score = 37.8 bits (87), Expect = 2.7,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 18/141 (12%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIW----EVIF 149
              + +++ C   C +C      G ++   ++    + E      +   ++      V  
Sbjct: 159 TAFVPIIYGCNFVCSYCIVPYRRGRERSRPMAEVIAEVERLAE--RGVKEVTLLGQTVNA 216

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
            G D L  S   L  +L  +  I  ++ +RF +  P     RI   +    K        
Sbjct: 217 YGHD-LPGSPD-LADLLTAVNEIPGIERIRFLTSHPKYMSDRIVQAVATLPKACE----- 269

Query: 210 AIHANHPYEF-SEEAIAAISR 229
             H N P +   +E +  + R
Sbjct: 270 --HINLPVQAGDDEVLRRMRR 288


>gi|313885881|ref|ZP_07819621.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Porphyromonas asaccharolytica PR426713P-I]
 gi|312924636|gb|EFR35405.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Porphyromonas asaccharolytica PR426713P-I]
          Length = 157

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C  +C  C   +      GT L+    +  +  I     +  +  +GGDP+    + L 
Sbjct: 25  GCSHHCPGCHNPDSHNPLVGTPLTEAYLQQIIDDINNNPLLDGITLSGGDPMFCPEELLT 84

Query: 164 KVLKTLRY 171
            +LK L+ 
Sbjct: 85  -LLKRLKS 91


>gi|258648137|ref|ZP_05735606.1| translation initiation factor IF-1 [Prevotella tannerae ATCC 51259]
 gi|260852018|gb|EEX71887.1| translation initiation factor IF-1 [Prevotella tannerae ATCC 51259]
          Length = 72

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ +E G +I       ISG  +  YI  LPG   KV++  +++ K   G     
Sbjct: 22  FRVELENGHEIT----AHISGKMRMHYIKILPGDKVKVEMSPYDLSK---GRIVFR 70


>gi|150020569|ref|YP_001305923.1| MiaB-like tRNA modifying enzyme [Thermosipho melanesiensis BI429]
 gi|149793090|gb|ABR30538.1| MiaB-like tRNA modifying enzyme [Thermosipho melanesiensis BI429]
          Length = 429

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 20/128 (15%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  +K+   C   C +C  R      +G  + SK  E  ++ I         E++ TG
Sbjct: 136 RTRAFIKVQDGCTNVCSYCTIRY----ARGMRIRSKPIELVVSEILRMVNKDYKEIVITG 191

Query: 152 GDPLIL------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
              L L          L  +LK +  IK    +R  S    ++P+ IN ELI+ +    K
Sbjct: 192 ---LNLGKYGKDKETSLLNLLKNVVKIKGDFRIRLSS----INPEDINDELIKFIVNEEK 244

Query: 206 PVYIAIHA 213
            V   +H 
Sbjct: 245 -VCNHLHV 251


>gi|91204926|ref|YP_537281.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii
           RML369-C]
 gi|122426084|sp|Q1RKC2|MIAB_RICBR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|91068470|gb|ABE04192.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii
           RML369-C]
          Length = 446

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 34/141 (24%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRI--LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           D + +     L      YP      + +   C  +C FC     V         S++ E 
Sbjct: 133 DFVEEAKFDQLP--EQLYPQGASSFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185

Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
                    +  +++ +G   ++L            S  +   L  +++ L  I +++ L
Sbjct: 186 VYR------EALKIVSSGAKEIMLLGQNVNAYHGKTSDDKVFTLADLIRHLVKIPNLERL 239

Query: 179 RFHSRVPIVDPQRINPELIQC 199
           R+ +  PI     +  +LI  
Sbjct: 240 RYTTSHPID----MTDDLISL 256


>gi|265767377|ref|ZP_06095043.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
 gi|263252682|gb|EEZ24194.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
          Length = 415

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 97  ILLKLLHVCPVYCRFCFR--REMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++L   C + CR+C    +++V   ++   LS  +    L  ++    +  + F GG+
Sbjct: 130 VTMRLTGECSINCRYCQTVDKQIVWCRKQDNRLSYNEICRLLEQLKHTP-VTLINFVGGN 188

Query: 154 PLILSHKRLQKVLKTL 169
             +LS+  L ++L  L
Sbjct: 189 --VLSYPFLDELLNEL 202


>gi|239993006|ref|ZP_04713530.1| molybdenum cofactor biosynthesis protein A [Alteromonas macleodii
           ATCC 27126]
          Length = 322

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 26/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C   C++C      G      ++  + +  L    +     +V  TGG+P  L 
Sbjct: 15  LSVTEACNFRCQYCLPDGYEGPTSDQFMTLNEIDTLLKAFAK-LGTSKVRLTGGEP-TLR 72

Query: 159 HKRLQKVLKTLRY----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
              L   +  L      I+ V +    +R+     ++   +     KEAG   V ++I +
Sbjct: 73  RDFLD--ILRLTSNTPGIERVAMTTHGARM-----EKFAHQW----KEAGLHQVNVSIDS 121

Query: 214 NHPYEFSE--------EAIAAISRLANAGIILLSQSVLLKGINDD 250
             P +F+           +  +    +AG+ +   SVLL   +D 
Sbjct: 122 LDPRQFAAITGQDKLKAVLRGLDAAIDAGLDVKVNSVLLNDFSDS 166


>gi|95928217|ref|ZP_01310965.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
 gi|95135488|gb|EAT17139.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
          Length = 369

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 40/217 (18%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTG 151
           P  I  +    C + C  C       S          TE A   I +  ++ +  ++ +G
Sbjct: 10  PKWIAWETTRRCNLTCVHC----RCSSDMEAASGDFTTEEAFKMIDDICEVSKPVMVLSG 65

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210
           G+PL+         +  +      + LR        +   I  E+   + +A  K V ++
Sbjct: 66  GEPLMRPD------IFEIAEYGTSKGLRMC---MATNGTLITDEVCAKMNKADIKMVSLS 116

Query: 211 IHANHPYEFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
           +  +   E  ++             A   L   GI  L  S   K    +   +AN  + 
Sbjct: 117 LDGSTA-EIHDDFRQCPGAFEGVKRAAETLTRNGIKFLINSSFTK---RNQHDIANTFKL 172

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
              L    +Y+             +    G++I+  L
Sbjct: 173 AKSLGATAWYMFM----------IVPTGRGEEIMNEL 199


>gi|60683617|ref|YP_213761.1| hypothetical protein BF4196 [Bacteroides fragilis NCTC 9343]
 gi|60495051|emb|CAH09869.1| hypothetical protein BF4196 [Bacteroides fragilis NCTC 9343]
          Length = 416

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 6/76 (7%)

Query: 97  ILLKLLHVCPVYCRFCFR--REMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + ++L   C + CR+C    +++V   ++   LS  +    L  ++    +  + F GG+
Sbjct: 131 VTMRLTGECSINCRYCQTVDKQIVWCRKQDNRLSYNEICRLLEQLKHTP-VTLINFVGGN 189

Query: 154 PLILSHKRLQKVLKTL 169
             +LS+  L ++L  L
Sbjct: 190 --VLSYPFLDELLNEL 203


>gi|327399314|ref|YP_004340183.1| 30S ribosomal protein S12 methylthiotransferase rimO [Hippea
           maritima DSM 10411]
 gi|327181943|gb|AEA34124.1| Ribosomal protein S12 methylthiotransferase rimO [Hippea maritima
           DSM 10411]
          Length = 429

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTGGD--- 153
           LK+   C   C FC               S+  +  +    +     + E+  T  D   
Sbjct: 137 LKIADGCSNRCTFC-----AIPLIKGGFKSRGIDELVEEAEVLADKGVRELYITAQDTTA 191

Query: 154 PLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210
            +   +++  L ++LK L  I+ +  +R         P  +  ELI+ +  A + V YI 
Sbjct: 192 YMFEKNRKNALVELLKKLDEIEGLSWVRL----MYTYPSYVTDELIEFMSTARRIVRYID 247

Query: 211 IHANHP 216
           +   H 
Sbjct: 248 MPFQHA 253


>gi|256028544|ref|ZP_05442378.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Fusobacterium sp. D11]
 gi|289766463|ref|ZP_06525841.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Fusobacterium sp. D11]
 gi|289718018|gb|EFD82030.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Fusobacterium sp. D11]
          Length = 112

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 3/84 (3%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDP 154
           R+ L +   C   C+ CF  E      G   + K+    + Y ++    I  +   GGDP
Sbjct: 18  RVSLFVSG-CTHCCKNCFNEETWDENYGKKFTEKEENEIIEYFKKYGKTIKGLSLLGGDP 76

Query: 155 LILSH-KRLQKVLKTLRYIKHVQI 177
               + K L K +K L+ I  ++I
Sbjct: 77  TYPKNIKPLLKFIKNLKRIYQIEI 100


>gi|157377532|ref|YP_001476132.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis
           HAW-EB3]
 gi|157319906|gb|ABV39004.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis
           HAW-EB3]
          Length = 326

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 17/160 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +  VC   C +C         +   L+  + E  +A   E     ++  TGG+P +  
Sbjct: 17  MSVTDVCNFKCTYCLPDGYRPDGRSKFLALSEIENLVAAFSE-VGTQKIRITGGEPTLRK 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217
                 +++ +    + +I    +     +  R+     +      + + +++ +  P  
Sbjct: 76  D--FTDIIRAVA--DNDKIKTIAT---TTNGYRLEKHAKEWYDAGLRRINVSVDSLDPKM 128

Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249
             + +      E +  I     AG   +   +VLLKG ND
Sbjct: 129 FYQITGENKFDEVMRGIDAALEAGFERVKINAVLLKGFND 168


>gi|94267016|ref|ZP_01290661.1| Radical SAM [delta proteobacterium MLMS-1]
 gi|93452290|gb|EAT02931.1| Radical SAM [delta proteobacterium MLMS-1]
          Length = 909

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 29/157 (18%)

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--S 142
           P   IVH   DR+ L++   C   CRFC    ++         ++    ALA+I++    
Sbjct: 250 PATRIVH---DRLGLEIARGCTRGCRFCQ-AGIIYRPVREREPARLLAEALAHIEQTGFD 305

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQC 199
           ++  +  + GD   + ++ L +++  L   K    +  +R  +         +  E+++ 
Sbjct: 306 EVALLSLSSGDYACI-NELLGRLMDALAQRKVSVSLPSMRVGT---------LTAEMMEQ 355

Query: 200 LKEAGKPVYIAIHANHPYEFSEEA-IAAISRLANAGI 235
           ++   K  +           + EA    + R+ N GI
Sbjct: 356 IRRVRKTGFT---------LAPEAGSERLRRVLNKGI 383


>gi|294338108|emb|CBJ93946.1| hypothetical phage protein (Radical SAM family) [Campylobacter
           phage CP220]
          Length = 306

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 42/137 (30%), Gaps = 16/137 (11%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDP 154
           R  +   + C   C +C               S+        ++    ++   +  GG+P
Sbjct: 27  RAAIMTTNKCCFSCEYCCNSGFTDFNAAKNTKSEADLKCFNLVKAIFPRLKSAVLCGGEP 86

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L+     L   L   + +K V IL       +           + LKE    + +     
Sbjct: 87  LMC--DYLYNYLDLFKDLKDVTILT----NLLYIKDHY-----KRLKEYR-NLDLVTTY- 133

Query: 215 HPYEFSEEAIAAISRLA 231
           H  + +  +   I RL 
Sbjct: 134 HASQIN--SNQYIERLK 148


>gi|238018952|ref|ZP_04599378.1| hypothetical protein VEIDISOL_00812 [Veillonella dispar ATCC 17748]
 gi|237864436|gb|EEP65726.1| hypothetical protein VEIDISOL_00812 [Veillonella dispar ATCC 17748]
          Length = 472

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 93  YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y DRI+L       + C   C +C         K   L+       +  ++       VI
Sbjct: 80  YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQNQIREEVIALEAMGHKRIVI 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYI 172
            +G DPL      L+ +L++++ I
Sbjct: 140 ESGEDPLNNP---LEYILESIKTI 160


>gi|229007366|ref|ZP_04164964.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock1-4]
 gi|228753897|gb|EEM03337.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock1-4]
          Length = 364

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ ++   C + C  C R E    +    L+  + +  +  I E +Q   ++F+GGD
Sbjct: 7   PFIVIWEVTRACELKCLHC-RAEAQYRRDPRELTFLEGKRLIDEIYEMNQPM-LVFSGGD 64

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI---- 209
           PL+         +  L      + LR  S  P   P  +  E IQ  K  G   +     
Sbjct: 65  PLMRED------IYELANYAVQKGLRV-SMTPSATPN-VTKEAIQKAKGVGLARWAFSID 116

Query: 210 -AIHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
            A    H          + + +AI  ++ L    I +   + + K    + E +A L+  
Sbjct: 117 GATAETHDRFRGVAGSFQLTMDAIQYLNELQ---IPVQINTTISKYNVHEVEEMAALVEK 173

Query: 261 F 261
            
Sbjct: 174 L 174


>gi|212550430|ref|YP_002308747.1| translation initiation factor IF-1 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
 gi|212548668|dbj|BAG83336.1| translation initiation factor IF-1 [Candidatus Azobacteroides
           pseudotrichonymphae genomovar. CFP2]
          Length = 72

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ +E G +I       ISG  +  YI  LPG   KV++  +++ K   G     
Sbjct: 22  FRVELENGHEIE----AHISGKMRMHYIKILPGDKVKVEMSPYDLSK---GRISFR 70


>gi|146282217|ref|YP_001172370.1| molybdenum cofactor biosynthesis protein A [Pseudomonas stutzeri
           A1501]
 gi|145570422|gb|ABP79528.1| molybdopterin biosynthetic protein A2 [Pseudomonas stutzeri A1501]
          Length = 331

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 29/167 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C   C +C   +MV + +  +L+ ++  A          +  +  TGG+PL+  
Sbjct: 19  LSVTDRCDFRCTYCMSEDMVFAPRAQILTLEELYAVADAFIS-LGVKRIRVTGGEPLV-- 75

Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
            K L  +L  L     ++ L      S++P          L   L EAG    + I  + 
Sbjct: 76  RKGLTGLLARLGARNELEDLAITTNGSQLP---------SLAASLHEAGVR-RLNISLDS 125

Query: 216 PY-----EFS-----EEAIAAISRLANAGI--ILLSQSVLLKGINDD 250
                  E +     ++ +  I    +AG   I L+ SV+ KG NDD
Sbjct: 126 LKRERFAELTRRDRLDQVLEGIEAARSAGFKRIKLN-SVVQKGRNDD 171


>gi|74311197|ref|YP_309616.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
           sonnei Ss046]
 gi|82543105|ref|YP_407052.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
           boydii Sb227]
 gi|123742024|sp|Q324N4|MIAB_SHIBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|123746029|sp|Q3Z4D1|MIAB_SHISS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|73854674|gb|AAZ87381.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|81244516|gb|ABB65224.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|320174711|gb|EFW49843.1| tRNA-i(6)A37 methylthiotransferase [Shigella dysenteriae CDC
           74-1112]
 gi|323163924|gb|EFZ49733.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella sonnei 53G]
 gi|332097757|gb|EGJ02731.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii 3594-74]
          Length = 474

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 29/158 (18%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
              + ++  C  YC +C      G +      S D    +A +  +  + EV   G +  
Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAAQ-GVREVNLLGQNVN 204

Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLK- 201
                    S      +L+ +  I  +  +RF +  P      I++  R  PEL+  L  
Sbjct: 205 AWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 202 --EAGKPVYIA----IHANHPYEFSEEAIAAISRLANA 233
             ++G    +      H       + E  A I +L  A
Sbjct: 265 PVQSGSDRILNLMGRTHT------ALEYKAIIRKLRAA 296


>gi|327438744|dbj|BAK15109.1| coproporphyrinogen III oxidase [Solibacillus silvestris StLB046]
          Length = 500

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 17/163 (10%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALA 136
           I +   + +  +     +  +   +  CP  C +C F    + S +      K  +    
Sbjct: 156 IVERQLTVIPDLDELGKEISIYIGVPFCPTMCAYCTFPAYAIQSNRKAGRVEKFIDGLHI 215

Query: 137 YIQE--------KSQIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIV 187
            ++E          +I  + + GG P  +    +  + KT+     + + +R  + V   
Sbjct: 216 ELREMGKWLTEKNMRITSIYWGGGTPTSIEAHEMDALYKTMFDAFPNPESIREIT-VEAG 274

Query: 188 DPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
            P  I PE I+ LK+ G   + +      P  +++E + AI R
Sbjct: 275 RPDTITPEKIEVLKKWGIDRISVN-----PQSYTQETLKAIGR 312


>gi|323135945|ref|ZP_08071028.1| molybdenum cofactor biosynthesis protein A [Methylocystis sp. ATCC
           49242]
 gi|322399036|gb|EFY01555.1| molybdenum cofactor biosynthesis protein A [Methylocystis sp. ATCC
           49242]
          Length = 346

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 33/172 (19%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + + +   C   C +C    M    +  +L+ ++ +   +    +     +  TGG+PL+
Sbjct: 28  VRVSVTDRCDFRCVYCMSEHMTFLPRRDLLTLEELDRLCSAFVARGTKR-LRITGGEPLV 86

Query: 157 ----------LSHKRLQKVLKTLRYIKHVQIL-RFHSRV-------PIVDPQRINPELIQ 198
                     LS       L+ L    +   L RF S +         V    ++P   +
Sbjct: 87  RHDVMTLFRALSRHLASGALEELTLTTNGSQLARFASELVDCGVKRVNVSLDTLDPGRFR 146

Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
            L   G         +H        +A +     AG+ +   +V LKG+N+D
Sbjct: 147 ALTRTG---------DHAR-----VMAGVDAALAAGLRVKLNAVALKGVNED 184


>gi|291166122|gb|EFE28168.1| Fe-S oxidoreductase [Filifactor alocis ATCC 35896]
          Length = 424

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 15/115 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R  +K+   C  +C +C     +       + S+  E  +  +++   +   EV+ TG
Sbjct: 135 HTRAFVKIQDGCDRFCTYC-----IIPFTRGPVRSRSLENIVYEVKKLVNNGYKEVVLTG 189

Query: 152 GDPLIL----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
                       + L  V++ L  I  ++ +R  S    V+P  I  + ++ + +
Sbjct: 190 IHVASYGKDTKKETLIDVIERLSTIDGLERIRTSS----VEPIIITEDFLKRVSQ 240


>gi|260221009|emb|CBA29146.1| Molybdenum cofactor biosynthesis protein A [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 385

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F ++        +LS ++             + ++  TGG+
Sbjct: 51  ISVTDRCNFRCSYCMPKEVFHKDYPYLPHSALLSFEEITTLAKQFVA-LGVQKIRLTGGE 109

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K ++ +++ L  I
Sbjct: 110 PLL--RKNIETLIEQLAAI 126


>gi|269122177|ref|YP_003310354.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Sebaldella termitidis ATCC 33386]
 gi|268616055|gb|ACZ10423.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Sebaldella termitidis ATCC 33386]
          Length = 163

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 24/65 (36%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
             C   C  C   E      G V+ SK  +     I     +  +  +GGDP   S + L
Sbjct: 24  SGCSHACPGCHNEESWNPDNGEVMDSKYFKKITDEINGNKMLSGITISGGDPFYDSEEFL 83

Query: 163 QKVLK 167
             +++
Sbjct: 84  DFLVR 88


>gi|256393258|ref|YP_003114822.1| GAF sensor hybrid histidine kinase [Catenulispora acidiphila DSM
            44928]
 gi|256359484|gb|ACU72981.1| GAF sensor hybrid histidine kinase [Catenulispora acidiphila DSM
            44928]
          Length = 1588

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 19/168 (11%)

Query: 152  GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
             DP + S   L    +TLR     ++LR H+ +    P     EL+  L E  + + + +
Sbjct: 1385 ADPALHSIPILAHHNRTLRS-DQERLLRAHAEL---YP----LELLPSLDELRERIVLHL 1436

Query: 212  HANHPYEFSEEA---IAAISRLANAGIILLSQSVLLKGINDDPEILANL--MRTFVELRI 266
             A HP +            + L ++G +L  +SVL+  I+DD   L  L  M     +R+
Sbjct: 1437 GAEHPDDVVPLPQPGRERPAELPDSGGLLAGRSVLV--IDDDARNLFALTGMLEMHGMRV 1494

Query: 267  KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314
                +   D   G    +        ++  +  ++ G      I  +P
Sbjct: 1495 ----VDAEDGVKGIQALQNDPRIEVILMDVMMPEMDGYEATARIRTMP 1538


>gi|296125375|ref|YP_003632627.1| Radical SAM domain protein [Brachyspira murdochii DSM 12563]
 gi|296017191|gb|ADG70428.1| Radical SAM domain protein [Brachyspira murdochii DSM 12563]
          Length = 265

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 20/113 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD----TEAALAYIQEKSQ--IWEVIFTGG 152
           + +   C + C +C        ++G +  S +     E   + ++E S+  I +V  TGG
Sbjct: 14  VSVTDRCNLRCVYCM------PEEGIIKKSHNEILTFEQIYSIVKEASELGIKKVRITGG 67

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           +PL+   K +++++  +R I+ V+I+   +   ++        L + LK AG 
Sbjct: 68  EPLV--RKNIEELVSMIRSIEKVEIIAMTTNAVLLY------SLAEKLKNAGL 112


>gi|254432004|ref|ZP_05045707.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Cyanobium sp. PCC
           7001]
 gi|197626457|gb|EDY39016.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Cyanobium sp. PCC
           7001]
          Length = 467

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 23/156 (14%)

Query: 92  RYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           RY         LK+   C   C FC    + G Q+   +  +   A    +  +     V
Sbjct: 144 RYRTTSEAVAYLKVAEGCDYRCAFCIIPRLRGDQRSRPI--ESIVAEARQLAAQGVKELV 201

Query: 148 IFT------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
           + +      G D  +    RL ++L+ L  ++ +  +R H   P        PE++   +
Sbjct: 202 LISQITTNYGLD--LYGKPRLAELLRALAEVE-IPWIRVHYAYPTGL----TPEVLAAYR 254

Query: 202 EAGKPV-YIAIHANHPYEFSEEAIAAISRLANAGII 236
           E    V Y+ +   H +    + + A++R   A + 
Sbjct: 255 EVPNVVPYLDLPLQHSH---PDVLRAMNRPWQANVT 287


>gi|169824874|ref|YP_001692485.1| anaerobic ribonucleoside-triphosphate reductase activator
           [Finegoldia magna ATCC 29328]
 gi|302379664|ref|ZP_07268149.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Finegoldia magna ACS-171-V-Col3]
 gi|167831679|dbj|BAG08595.1| anaerobic ribonucleoside-triphosphate reductase activator
           [Finegoldia magna ATCC 29328]
 gi|302312571|gb|EFK94567.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Finegoldia magna ACS-171-V-Col3]
          Length = 166

 Score = 37.8 bits (87), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 3/76 (3%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R    +   C + C+ CF +E      G   +   T   + Y+  + +I  +   GG+P 
Sbjct: 18  RCTFFVTG-CSLNCKNCFNKEYQDPNFGDKWTDTQTNQIIDYL-NQEEIDGLTILGGEPF 75

Query: 156 ILSHKRLQKVLKTLRY 171
                 L +++  +R 
Sbjct: 76  ESCDD-LIEIVGKIRE 90


>gi|320183045|gb|EFW57910.1| tRNA-i(6)A37 methylthiotransferase [Shigella flexneri CDC 796-83]
          Length = 474

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 29/158 (18%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
              + ++  C  YC +C      G +      S D    +A +  +  + EV   G +  
Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAAQ-GVREVNLLGQNVN 204

Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLK- 201
                    S      +L+ +  I  +  +RF +  P      I++  R  PEL+  L  
Sbjct: 205 AWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 202 --EAGKPVYIA----IHANHPYEFSEEAIAAISRLANA 233
             ++G    +      H       + E  A I +L  A
Sbjct: 265 PVQSGSDRILNLMGRTHT------ALEYKAIIRKLRAA 296


>gi|322419474|ref|YP_004198697.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M18]
 gi|320125861|gb|ADW13421.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M18]
          Length = 326

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 48/256 (18%), Positives = 93/256 (36%), Gaps = 63/256 (24%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C   + V       +LS ++     A     + I ++  TGG+PL+ 
Sbjct: 16  LSVTDRCNLRCSYCMPEDGVEKLSHCEMLSYEELLRISAE-AVAAGIEKIRITGGEPLV- 73

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216
             K +   L  L  +  ++ L   +         +  E+ Q LK+AG   + I++     
Sbjct: 74  -RKGILDFLSRLAVLPGLKELVLTTNGL------LLKEMAQGLKDAGVQRLNISL----- 121

Query: 217 YEFSEEAIAAISR---LAN---------------AGIILLSQSVLLKGINDDPEILANLM 258
                E  A I+R   L                   I +    V+++G+NDD   + + +
Sbjct: 122 DSLKPETFAKITRGGDLQRVLDGIDEAERVGFPPHKINV----VVMRGVNDD--EMLDFV 175

Query: 259 RTFVELRIKPY------YLHHPDLAAGTSHFR---LTIEEGQK-------IVASLKEKIS 302
              ++   +PY      Y+       G + +    +   E ++       I  +   + S
Sbjct: 176 ELTLK---RPYAVRFIEYM----PTCGDADWHDLCVPGAEIRERIARKYTIEETANTERS 228

Query: 303 GLCQPFYILDLPGGYG 318
           G  + F +   PG  G
Sbjct: 229 GPSKNFRVQGAPGSLG 244


>gi|126178826|ref|YP_001046791.1| radical SAM domain-containing protein [Methanoculleus marisnigri
           JR1]
 gi|125861620|gb|ABN56809.1| Radical SAM domain protein [Methanoculleus marisnigri JR1]
          Length = 398

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +   + + C + C  C+ R   G  +   L++++  A +  + E  ++  ++F+GG+PL+
Sbjct: 41  VFWNITNRCNLLCSHCYIRAGPGRGREDELTTEEGLALIDDLAEM-RVPLLLFSGGEPLV 99


>gi|187733108|ref|YP_001879330.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella
           boydii CDC 3083-94]
 gi|229890659|sp|B2TU59|MIAB_SHIB3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|187430100|gb|ACD09374.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii CDC
           3083-94]
          Length = 474

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 29/158 (18%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
              + ++  C  YC +C      G +      S D    +A +  +  + EV   G +  
Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAAQ-GVREVNLLGQNVN 204

Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLK- 201
                    S      +L+ +  I  +  +RF +  P      I++  R  PEL+  L  
Sbjct: 205 AWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264

Query: 202 --EAGKPVYIA----IHANHPYEFSEEAIAAISRLANA 233
             ++G    +      H       + E  A I +L  A
Sbjct: 265 PVQSGSDRILNLMGRTHT------ALEYKAIIRKLRAA 296


>gi|317490251|ref|ZP_07948739.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|325833449|ref|ZP_08165898.1| radical SAM domain protein [Eggerthella sp. HGA1]
 gi|316910745|gb|EFV32366.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|325485373|gb|EGC87842.1| radical SAM domain protein [Eggerthella sp. HGA1]
          Length = 415

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 36/185 (19%)

Query: 96  RIL---LKLLHVCPVYCRFCF-----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147
           R+L   L +   C + C  C+     R  +            D + A+  +   + + ++
Sbjct: 75  RVLSAYLHVTQRCNLACAGCYSLDEHRNRL------ADAPLADMKRAVEGLAA-AGLSQL 127

Query: 148 IFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--- 203
           I +GG+PL+      + +  K    I  V +L   +        R+  E ++ L      
Sbjct: 128 IISGGEPLLREDLPDIVEHAKRACGIASVTVLSNGT--------RMTEEALERLAPNVDC 179

Query: 204 ------GKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL-LSQSVLLKGINDDPEILAN 256
                 G       +      F  E + A+  +  AGI   +  +V  K + DD      
Sbjct: 180 VSVSFDGCSAAAPAYIRSEQRFD-ELVEAVRMVQRAGIPAHIIPTVHAKNV-DDLASYVQ 237

Query: 257 LMRTF 261
           L R  
Sbjct: 238 LSRDL 242


>gi|291515240|emb|CBK64450.1| SSU ribosomal protein S12P methylthiotransferase [Alistipes shahii
           WAL 8301]
          Length = 432

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 71/200 (35%), Gaps = 39/200 (19%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVG------SQKGTVLSSKDTEAALAYIQEKSQIWE 146
             LK+   C   C +C     R   V        ++   L+ +     +  I + +  + 
Sbjct: 136 AYLKISEGCNWKCGYCAIPLIRGAHVSVPMEELEEEARKLAGQGVRELMV-IAQDTTYYG 194

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           +   G        + L ++L+ L  I  ++ +R H   P   P     E+I+ +    K 
Sbjct: 195 IDLYGR-------RMLAELLRRLCRIDGIEWIRLHYAYPAGFP----DEVIEAMASEPKI 243

Query: 207 V-YIAI---HAN-------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG----INDDP 251
             Y+ I   H +       H      EA+  I RL  A   L  ++ LL G       D 
Sbjct: 244 CKYLDIPFQHISDAQLASMHRRHTKAEAMELIGRLRGAIPDLALRTTLLVGYPGETEADF 303

Query: 252 EILANLMR--TFVELRIKPY 269
           E L   +R   F  L + PY
Sbjct: 304 EELLAFVREVRFERLGVFPY 323


>gi|289193018|ref|YP_003458959.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
 gi|288939468|gb|ADC70223.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22]
          Length = 467

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 46/109 (42%), Gaps = 14/109 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           ++  + + C + C+ C+     G      L++++ +  +  I   + +  + F+GG+PL+
Sbjct: 115 VVWDVTYRCNLRCKHCY--ANAGKPLEDELNTEEAKKVVD-ILGNAGVVALAFSGGEPLM 171

Query: 157 LSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                L +++  ++     V I    +         +  E ++ LKE  
Sbjct: 172 RKD--LFELIDRVKDYDMQVSIATNGT--------LLTKENVRKLKEHN 210


>gi|228999813|ref|ZP_04159385.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock3-17]
 gi|228759755|gb|EEM08729.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock3-17]
          Length = 364

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ ++   C + C  C R E    +    L+  + +  +  I E +Q   ++F+GGD
Sbjct: 7   PFIVIWEVTRACELKCLHC-RAEAQYRRDPRELTFLEGKRLIDEIYEMNQPM-LVFSGGD 64

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI---- 209
           PL+         +  L      + LR  S  P   P  +  E IQ  K  G   +     
Sbjct: 65  PLMRED------IYELANYAVQKGLRV-SMTPSATPN-VTKEAIQKAKGVGLARWAFSID 116

Query: 210 -AIHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
            A    H          + + +AI  ++ L    I +   + + K    + E +A L+  
Sbjct: 117 GATAETHDRFRGVAGSFQLTMDAIQYLNELQ---IPVQINTTISKYNVHEVEEMAALVEK 173

Query: 261 F 261
            
Sbjct: 174 L 174


>gi|76801423|ref|YP_326431.1| molybdopterin-based tungsten cofactor biosynthesis protein 1
           [Natronomonas pharaonis DSM 2160]
 gi|76557288|emb|CAI48864.1| molybdopterin-based tungsten cofactor biosynthesis protein 1
           [Natronomonas pharaonis DSM 2160]
          Length = 371

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 23/120 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ ++   C + C  C             L++ + +  L    E      V+ +GGD
Sbjct: 19  PFVLIWEVTQACELACDHCRADAKPSRHPDE-LTTAEGKRLLDSAAEFGDGQLVVLSGGD 77

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCLKEAGKP 206
           P  +    L            V+++R+ ++        P    + + P+ I  L +AG  
Sbjct: 78  P--MKRDDL------------VELVRYGTKQGLRMTLTPSGT-EALTPDNIAALVDAGLQ 122


>gi|300692273|ref|YP_003753268.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
           PSI07]
 gi|299079333|emb|CBM10239.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum
           PSI07]
          Length = 341

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C   +M    +  +LS +D +  A A+I+    + ++  TGG+PL+ 
Sbjct: 22  LSVTDRCNLRCVYCMSEDMTFHARPDLLSMEDFDRIARAFIRR--GVRKLRITGGEPLVR 79

Query: 158 SH 159
             
Sbjct: 80  KD 81


>gi|296269899|ref|YP_003652531.1| membrane protein [Thermobispora bispora DSM 43833]
 gi|296092686|gb|ADG88638.1| Membrane protein involved in the export of O- antigen and teichoic
           acid-like protein [Thermobispora bispora DSM 43833]
          Length = 1197

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 176 QILRFHSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230
           ++ R  +R+  V P   R+   L+  L   G  +Y+      P E +   +  ++ L
Sbjct: 474 RVTRLGTRMLAVMPHPDRVKRWLLPILSAQGLAIYLIALLAPPGELAGVDVERMNGL 530


>gi|281422230|ref|ZP_06253229.1| translation initiation factor IF-1 [Prevotella copri DSM 18205]
 gi|281403735|gb|EFB34415.1| translation initiation factor IF-1 [Prevotella copri DSM 18205]
          Length = 72

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ +E G  I       ISG  +  YI  LPG   KV++  +++ K   G     
Sbjct: 22  FRVELENGVDIT----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70


>gi|167465181|ref|ZP_02330270.1| hypothetical protein Plarl_21911 [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322384550|ref|ZP_08058230.1| hypothetical protein PL1_1179 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321150605|gb|EFX44082.1| hypothetical protein PL1_1179 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 367

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG 152
           L   +VC  +C FC  R  +G +     S    +  +++I E     + E   TGG
Sbjct: 66  LYFTNVCEAHCAFCHFRRNLGEEGAYTYSP---DEMISHIHEHFHPGMREFHITGG 118


>gi|160903010|ref|YP_001568591.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95]
 gi|160360654|gb|ABX32268.1| Radical SAM domain protein [Petrotoga mobilis SJ95]
          Length = 474

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 5/70 (7%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDTEAALAYIQEKSQIWEVIF 149
           P+ ++  +  +C + C  C+  +  G       G  L++++   A+  I   S +  +  
Sbjct: 6   PETLIWDVTQLCNLSCIHCYNNDRYGKNNIYHSGKDLTTEEARNAIEKI-ANSGVKHIHL 64

Query: 150 TGGDPLILSH 159
            GG+P     
Sbjct: 65  LGGEPFCRKD 74


>gi|197117742|ref|YP_002138169.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem]
 gi|197087102|gb|ACH38373.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem]
          Length = 326

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 30/168 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C   + V   +   +LS ++          +  I ++  TGG+PL+ 
Sbjct: 16  LSVTDRCNMRCSYCMPAQGVEKLEHKEMLSYEELYRVAGACIAQ-GIEKIRVTGGEPLV- 73

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
             K +   L+ L  +  ++ L   +            E+ Q LK AG   + I++     
Sbjct: 74  -RKGIVPFLERLARVPGLKELVLTTNGLQ------LEEMAQPLKRAGVARLNISL----- 121

Query: 217 YEFSEEAIAAISR---LAN----------AG-IILLSQSVLLKGINDD 250
                E  A I+R   L            AG   L    V+++G+NDD
Sbjct: 122 DSLRPEVFARITRGADLKRVLSGIEAAEKAGFANLKINMVVMRGVNDD 169


>gi|238794064|ref|ZP_04637681.1| Molybdenum cofactor biosynthesis protein A [Yersinia intermedia
           ATCC 29909]
 gi|238726569|gb|EEQ18106.1| Molybdenum cofactor biosynthesis protein A [Yersinia intermedia
           ATCC 29909]
          Length = 326

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 21/163 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  VC   C +C           + LS  +               ++  TGG+P +  
Sbjct: 17  LSITDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRVSRAFAL-LGTEKIRLTGGEPSMRR 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
                 ++ T+R    ++ L         +  R+  +  Q  +EAG    I +  +   P
Sbjct: 76  D--FSDIIATIRQNPAIRTL-----AVTTNGYRLARDAAQW-REAGLT-AINVSVDSLDP 126

Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
            +F          + +  I    +AG   +   +VL++ +ND 
Sbjct: 127 RQFHAITGQDKFHQVMQGIDAAFDAGFEKVKINAVLMRDVNDR 169


>gi|317485155|ref|ZP_07944037.1| thiazole biosynthesis protein ThiH [Bilophila wadsworthia 3_1_6]
 gi|316923690|gb|EFV44894.1| thiazole biosynthesis protein ThiH [Bilophila wadsworthia 3_1_6]
          Length = 472

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 9/122 (7%)

Query: 93  YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y +RI+    L L + C   C +C             L+ +D    +  +Q+       I
Sbjct: 80  YGNRIVMFAPLYLSNYCINSCSYCPYHAKNKHIARKKLTQEDIVREVTALQDMGHKRLAI 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS-RVPIVDPQRINPELIQCLKEAGKPV 207
            +G DPL    + + + ++T+  +KH    R  S R   V+      E  + LK+AG   
Sbjct: 140 ESGEDPLNNPIEYILESIRTIYSVKH----RNGSIRRVNVNIAATTVENYRKLKDAGIGT 195

Query: 208 YI 209
           YI
Sbjct: 196 YI 197


>gi|254561814|ref|YP_003068909.1| molybdenum biosynthetic protein A [Methylobacterium extorquens DM4]
 gi|254269092|emb|CAX25055.1| molybdenum biosynthetic protein A [Methylobacterium extorquens DM4]
          Length = 344

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 39/173 (22%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C   +M    K  +L+ ++ +           + ++  TGG+PL+  
Sbjct: 30  ISVTDRCDFRCAYCMSEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRR 88

Query: 159 HKRLQKVLKTLRYIKHVQILRF--------HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
              +  + + L    H++             S++      R  PEL + L      V + 
Sbjct: 89  D--IMHLFRRLSR--HLKSGTLDELTLTTNGSQL-----ARFAPELAE-LGVRRINVSLD 138

Query: 211 IHANHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKGINDD 250
                      +   AI+R                 GI +   +V LKG+N+D
Sbjct: 139 T-------LDPDKFRAITRRGDLSVVLAGIEAARAEGIKVKINAVALKGVNED 184


>gi|288942386|ref|YP_003444626.1| MiaB family RNA modification enzyme [Allochromatium vinosum DSM
           180]
 gi|288897758|gb|ADC63594.1| RNA modification enzyme, MiaB family [Allochromatium vinosum DSM
           180]
          Length = 441

 Score = 37.8 bits (87), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 45/116 (38%), Gaps = 18/116 (15%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD 153
              + ++  C  YC +C     V         S+  +  +A + + ++  + E+   G +
Sbjct: 148 TAFVSVMEGCSKYCTYC-----VVPYTRGEEISRPFDDVIAEVADLAEQGVREINLLGQN 202

Query: 154 -----PLIL--SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
                 L+   S   L  +++ +  ++ +  +RF +  P+        +LI+   E
Sbjct: 203 VNAYRGLMADGSTASLALLIRYVAAVEGIGRIRFTTSHPV----EFGDDLIETFAE 254


>gi|298479874|ref|ZP_06998074.1| 2-methylthioadenine synthetase [Bacteroides sp. D22]
 gi|298274264|gb|EFI15825.1| 2-methylthioadenine synthetase [Bacteroides sp. D22]
          Length = 439

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C      G  +   ++S   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|295084759|emb|CBK66282.1| MiaB-like tRNA modifying enzyme [Bacteroides xylanisolvens XB1A]
          Length = 439

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C      G  +   ++S   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|294809243|ref|ZP_06767959.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b]
 gi|294443637|gb|EFG12388.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 418

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C      G  +   ++S   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|293368846|ref|ZP_06615450.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f]
 gi|292636151|gb|EFF54639.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f]
          Length = 439

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C      G  +   ++S   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|291556614|emb|CBL33731.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Eubacterium siraeum
           V10Sc8a]
          Length = 457

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF +         ++  +  + A+ ++ + S      EV F GG+PL
Sbjct: 101 LHVSHDCNLRCKYCFAQTGDFGGDRMLMKPETGKKAMDFLIKHSANRENLEVDFFGGEPL 160

Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
           +     + + +K  R I+  H +  RF
Sbjct: 161 MA-WDTVVETVKYARSIEKQHGKNFRF 186


>gi|237720003|ref|ZP_04550484.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|229450555|gb|EEO56346.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
          Length = 439

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C      G  +   ++S   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|237714843|ref|ZP_04545324.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262406886|ref|ZP_06083435.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22]
 gi|294647146|ref|ZP_06724745.1| MiaB-like protein [Bacteroides ovatus SD CC 2a]
 gi|229445168|gb|EEO50959.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262355589|gb|EEZ04680.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22]
 gi|292637433|gb|EFF55852.1| MiaB-like protein [Bacteroides ovatus SD CC 2a]
          Length = 439

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C  +C +C      G  +   ++S   E A           E++ TG  
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204

Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    + +    ++K L  ++ ++  R  S    ++P  +  E+I+ +  +       
Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|225388623|ref|ZP_03758347.1| hypothetical protein CLOSTASPAR_02359 [Clostridium asparagiforme
           DSM 15981]
 gi|225045299|gb|EEG55545.1| hypothetical protein CLOSTASPAR_02359 [Clostridium asparagiforme
           DSM 15981]
          Length = 319

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 13/92 (14%)

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
                RL+ + +       V +L   +R P   P      L+  L    KPV++ +    
Sbjct: 105 YAPLPRLRSLFERAVSHPDVALLSVATR-PDCLPDE-TVSLLAGL-NRRKPVWVELGLQT 161

Query: 216 PYEFS----------EEAIAAISRLANAGIIL 237
            +E +               A  RL  AGI +
Sbjct: 162 VHEDTARFIRRGYGFPVFEDACRRLKAAGITV 193


>gi|159127161|gb|EDP52276.1| pentafunctional AROM polypeptide, putative [Aspergillus fumigatus
           A1163]
          Length = 828

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 41/162 (25%)

Query: 113 FRREMVGSQKGTVLSSK--------DTEAALAYIQEKSQIWEVIFTGGDPLIL------- 157
           F R + G   G+  SS+          +  L ++       E++ +G D + L       
Sbjct: 274 FIRRIYGLSHGSPFSSEVSPEVHTFALQVPLDWLDSYKDP-EILDSGADAITLLIDADVD 332

Query: 158 -SHK-RLQKVLKTLRYIKHVQILRFHSRVPIV-----DPQRINP--ELIQCLKEAGKPVY 208
              + RL+  L       H+  LR HSRVP+V      P++I+    +++ L     P  
Sbjct: 333 GKDQNRLKSQLAR-----HMATLRLHSRVPVVVDLGFSPRKIDTYRSVLEMLLRL-VPDA 386

Query: 209 IAIHANHPYEF------SEEAIAAISRLANA---GIILLSQS 241
           +    + P E       ++ +I  I+    +   GI + SQ+
Sbjct: 387 VTCSLSCPDEIIQWLNTTKGSIKTIATWHQSTPLGIDV-SQT 427


>gi|167749297|ref|ZP_02421424.1| hypothetical protein EUBSIR_00248 [Eubacterium siraeum DSM 15702]
 gi|167657742|gb|EDS01872.1| hypothetical protein EUBSIR_00248 [Eubacterium siraeum DSM 15702]
          Length = 457

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF +         ++  +  + A+ ++ + S      EV F GG+PL
Sbjct: 101 LHVSHDCNLRCKYCFAQTGDFGGDRMLMKPETGKKAMDFLIKHSANRENLEVDFFGGEPL 160

Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
           +     + + +K  R I+  H +  RF
Sbjct: 161 MA-WDTVVETVKYARSIEKQHGKNFRF 186


>gi|160902962|ref|YP_001568543.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95]
 gi|160360606|gb|ABX32220.1| Radical SAM domain protein [Petrotoga mobilis SJ95]
          Length = 422

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 5/64 (7%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY-IQEKSQIWEVIFTGGDPL 155
           +   + + C + C+ C             L+ +D      Y I    +I  V+ TGG+PL
Sbjct: 100 VTFAITNSCNLNCKHCTASA--NEVFRGTLNLRDIYKIFDYFIAMNLKI--VVITGGEPL 155

Query: 156 ILSH 159
           I   
Sbjct: 156 IRKD 159


>gi|114566851|ref|YP_754005.1| Fe-S oxidoreductase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337786|gb|ABI68634.1| Fe-S oxidoreductase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 451

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 18/90 (20%)

Query: 195 ELIQCLKEAGKPVYIAIH----------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244
           +  + L     P+Y++IH           N+P   +    + + RL  A I + +Q VL 
Sbjct: 148 DWDKILSMRLSPLYVSIHCMQPELRARLFNNPR--AANIKSELKRLQEAVIEVHTQIVLC 205

Query: 245 KGIND------DPEILANLMRTFVELRIKP 268
            GIND          LA    +   + + P
Sbjct: 206 PGINDAEVLQHSIYELAQFFPSVASVGVVP 235


>gi|330959524|gb|EGH59784.1| putative transcriptional regulator [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 380

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 8/81 (9%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFT 150
           + LK  + C V C FC+  E V S K   ++ +  E +L  I++        ++  +++ 
Sbjct: 4   VYLKPTNYCNVGCDFCYLPEEVRSDK-NRMTPQTLEHSLQLIRDLAAREGHDRV-SILYH 61

Query: 151 GGDPLILSHKRLQKVLKTLRY 171
           GG+PL L+ + L +    +R 
Sbjct: 62  GGEPLTLAPEVLFEFSDAVRQ 82


>gi|328951851|ref|YP_004369185.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
 gi|328452175|gb|AEB08004.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109]
          Length = 337

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 6/77 (7%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +   + + C + C  CF         G  ++  +    L  ++E   +++V+FTGG+P  
Sbjct: 8   VHFIITNQCNLNCLHCFAD---SGVAGYEMTMDEIRKVLRELRE-LGVFQVLFTGGEPFC 63

Query: 157 LSHKRLQKVLKTLRYIK 173
            +     +V++    + 
Sbjct: 64  RND--FFEVMEDAEAMD 78


>gi|312962557|ref|ZP_07777047.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens
           WH6]
 gi|311283137|gb|EFQ61728.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens
           WH6]
          Length = 322

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C +C    + +V +Q    LS++     +AY+ E + I  +  TGG+PL+
Sbjct: 15  ISLTSACNYACTYCVPNGKRLVAAQDE--LSAEAMARGVAYLIEAAGIDRLRITGGEPLV 72

Query: 157 LSHKRLQKVLKTLRYI 172
               +L+  +  +  +
Sbjct: 73  SP--KLEAFMGAVGQM 86


>gi|297526282|ref|YP_003668306.1| Radical SAM domain protein [Staphylothermus hellenicus DSM 12710]
 gi|297255198|gb|ADI31407.1| Radical SAM domain protein [Staphylothermus hellenicus DSM 12710]
          Length = 450

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 22/131 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPL- 155
           +++   CP  C++C     V    G  +  +  +  + Y     +  I ++ F   D L 
Sbjct: 175 IEISRGCPYGCKYC----QVSYMHGFFMRHRSIDNIVEYTGCMVEKNIRDIRFISPDSLA 230

Query: 156 -----ILSHKRL---QKVLKTLRYIKHVQIL--RF--HSRVPIVDPQRINPELIQCLKEA 203
                +    RL   +++L  L   K+V+    R    S    V P+ +  +  + L++ 
Sbjct: 231 YGLKTMSREPRLDLIEELLSRLYK-KYVERKGARIFYGSFPSEVRPEHLTRDAARILRKY 289

Query: 204 --GKPVYIAIH 212
              K + +   
Sbjct: 290 VANKNIILGAQ 300


>gi|317050296|ref|YP_004111412.1| molybdenum cofactor biosynthesis protein A [Desulfurispirillum
           indicum S5]
 gi|316945380|gb|ADU64856.1| molybdenum cofactor biosynthesis protein A [Desulfurispirillum
           indicum S5]
          Length = 325

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 71/165 (43%), Gaps = 21/165 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           + + +   C + C +C   + +  + K  +L+ ++    L  +     + +V  TGG+PL
Sbjct: 16  VRISVTDRCNLKCFYCVPEDGICHATKDQLLTPEEIIRVLN-LLHGLGVSKVRITGGEPL 74

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214
             + + + K+++ +  I     +   +   ++ P          L+E G K V I++ + 
Sbjct: 75  --ARRGIGKLIRQISAIG-FSDIAMTTNG-VLLP-----RFAGLLRECGLKRVNISLDSL 125

Query: 215 HPYEFS--------EEAIAAISRLANAG-IILLSQSVLLKGINDD 250
           HP  F+        E+    I      G + +   +V ++GINDD
Sbjct: 126 HPERFASITGVDSFEQVWKGIQAAQENGLVPIKINAVAIRGINDD 170


>gi|332983050|ref|YP_004464491.1| Radical SAM domain-containing protein [Mahella australiensis 50-1
           BON]
 gi|332700728|gb|AEE97669.1| Radical SAM domain protein [Mahella australiensis 50-1 BON]
          Length = 289

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 11/80 (13%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           +Y  RIL ++  +C   C FC       ++    ++ +D +  L  ++   QI ++I TG
Sbjct: 16  KY--RILWEITDMCNQRCPFC------HAKGTNNITIEDVKKILDNLKI-LQIKDIILTG 66

Query: 152 GDPLILSHKRLQKVLKTLRY 171
           G+P +     + +++  ++ 
Sbjct: 67  GEPFLRKD--IFEIMDMIQR 84


>gi|323702894|ref|ZP_08114552.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
 gi|323532152|gb|EGB22033.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574]
          Length = 358

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 43/134 (32%), Gaps = 30/134 (22%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160
            ++C   CRFC       +    V+S  +        I       E++  GG   +    
Sbjct: 65  TNICYCKCRFCAFWREPDAPDAYVISQDELFTKIDETIAVGG--TELLIQGG---LHPEL 119

Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220
            L   +  LR IK    +  HS  P        PE+    +++G  +             
Sbjct: 120 GLDYYVNLLRSIKKRYDIHIHSFSP--------PEIWHIARKSGVSI------------- 158

Query: 221 EEAIAAISRLANAG 234
                A+ +L  AG
Sbjct: 159 ---REALQQLHQAG 169


>gi|253581157|ref|ZP_04858416.1| radical SAM domain-containing protein [Ruminococcus sp.
           5_1_39B_FAA]
 gi|251847594|gb|EES75565.1| radical SAM domain-containing protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 244

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 59  QFIPQKEE--LNILPEEREDPIGDNNHSPLKGIVHRYPDRI-----LLKLLHVCPVYCRF 111
           Q +P K++  L       ED       + +     +Y         +  + + C + C +
Sbjct: 42  QIVPDKQKELLEKYFIYEEDEAVFAEKTVIPYRDSKYYTLQGTSLHIFVMTNACNMNCVY 101

Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI--FTGGDPLILSHKRLQKVLK 167
           C  ++     KG  +S +  E A+  I  ++ +  +   F GG+PL  +   ++ +++
Sbjct: 102 CQAQDSEQLDKG-KMSMETAERAVD-IALQTPVRRMTFEFQGGEPLT-NFDVIKHIVQ 156


>gi|253698670|ref|YP_003019859.1| radical SAM protein [Geobacter sp. M21]
 gi|251773520|gb|ACT16101.1| Radical SAM domain protein [Geobacter sp. M21]
          Length = 358

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 42/221 (19%), Positives = 77/221 (34%), Gaps = 42/221 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           P  I  +    C + C  C    E+  S+     S+++ +  L  I + S+   V+ +GG
Sbjct: 7   PKWIAWETTQRCNLKCVHCRCSSELTSSEGD--FSTEEGKKLLKEISDFSKP-VVVLSGG 63

Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAG-KPVYI 209
           +PL+      L +   +L             R+    +   +  E+ + +K+A  K V +
Sbjct: 64  EPLMRPDIFELAEYGTSL-----------GLRMCMASNGSLVTDEVCEKMKKADIKMVSL 112

Query: 210 A-------IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           +       +H N    P  F     AA       G   L  S   K    +   +AN  +
Sbjct: 113 SLDGSTAEVHDNFRQCPGSFEGVLRAA-ELFRKHGQKFLINSSFTK---RNQHDIANTFK 168

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
               L    +Y+             +    G+ I++ L  K
Sbjct: 169 VAKSLGATAWYMFM----------IVPTGRGEDIMSELISK 199


>gi|294666547|ref|ZP_06731788.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
 gi|292603691|gb|EFF47101.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
          Length = 343

 Score = 37.4 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 89  IVHRY--PDRIL-LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEK 141
           +  RY  P R L L ++  C   C +C   + V    G      LS    E  +      
Sbjct: 14  MQDRYGRPLRDLRLSVIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS- 72

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             + +V  TGG+PL+     L  ++  L  I+ ++ L
Sbjct: 73  VGVTKVRLTGGEPLLRRD--LPSLIARLTAIEGIEDL 107


>gi|319654152|ref|ZP_08008241.1| hypothetical protein HMPREF1013_04861 [Bacillus sp. 2_A_57_CT2]
 gi|317394086|gb|EFV74835.1| hypothetical protein HMPREF1013_04861 [Bacillus sp. 2_A_57_CT2]
          Length = 222

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 16/119 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                +C + C  C     +  +    L     +  L  + E S +  +  TGG+P +LS
Sbjct: 34  FTTTVLCNMRCEHCAVGYTLQPRDPDALP---IDLMLKRLDEVSHLSSLSITGGEP-MLS 89

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215
            K ++  +  L    H + +R           +IN  L   L    +  P    +H +H
Sbjct: 90  KKSVKNYVAPLLRYAHERGVR----------TQINSNLTLELARYEEIIPYLDVLHISH 138


>gi|308182459|ref|YP_003926586.1| hypothetical protein HPPC_01445 [Helicobacter pylori PeCan4]
 gi|308064644|gb|ADO06536.1| hypothetical protein HPPC_01445 [Helicobacter pylori PeCan4]
          Length = 418

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRGSNIAQLIKKLSQITGLKRIRIGS 221


>gi|307718379|ref|YP_003873911.1| hypothetical protein STHERM_c06800 [Spirochaeta thermophila DSM
           6192]
 gi|306532104|gb|ADN01638.1| hypothetical protein STHERM_c06800 [Spirochaeta thermophila DSM
           6192]
          Length = 240

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           +     C + C +C   E+V       L  ++  A L   + +  +  V+FTGG+PL+  
Sbjct: 24  VLFTGGCNLRCPYCHNPELVEGDPEDFLPWEEIRAFLT--RRRGILKGVVFTGGEPLL-- 79

Query: 159 HKRLQKVLKTLRYI 172
              L  +++ +R +
Sbjct: 80  KGFLPSLIEEVRGM 93


>gi|297682136|ref|XP_002818786.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 complex subunit G2-like
           [Pongo abelii]
          Length = 1159

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%)

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
           +  V       +  +     + Y+    +  E + +         K+L  +LK L     
Sbjct: 747 KRKVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 800

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
            ++ L   +  P   P+  +      L+  G    ++IH  H   F  E    +S L + 
Sbjct: 801 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSILEDT 853

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
           G  L S+  +L  I D  E    L R   + +I   YL           G   F++  ++
Sbjct: 854 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 910

Query: 289 EGQKIVASLKE 299
               I+ ++K 
Sbjct: 911 RSLGIMQTVKG 921


>gi|260592743|ref|ZP_05858201.1| translation initiation factor IF-1 [Prevotella veroralis F0319]
 gi|288803955|ref|ZP_06409378.1| translation initiation factor IF-1 [Prevotella melaninogenica D18]
 gi|302345096|ref|YP_003813449.1| translation initiation factor IF-1 [Prevotella melaninogenica ATCC
           25845]
 gi|303237492|ref|ZP_07324057.1| translation initiation factor IF-1 [Prevotella disiens FB035-09AN]
 gi|325269513|ref|ZP_08136129.1| translation initiation factor IF-1 [Prevotella multiformis DSM
           16608]
 gi|325856032|ref|ZP_08171921.1| translation initiation factor IF-1 [Prevotella denticola CRIS
           18C-A]
 gi|327313212|ref|YP_004328649.1| translation initiation factor IF-1 [Prevotella denticola F0289]
 gi|260535274|gb|EEX17891.1| translation initiation factor IF-1 [Prevotella veroralis F0319]
 gi|288333588|gb|EFC72040.1| translation initiation factor IF-1 [Prevotella melaninogenica D18]
 gi|302150166|gb|ADK96428.1| translation initiation factor IF-1 [Prevotella melaninogenica ATCC
           25845]
 gi|302482312|gb|EFL45342.1| translation initiation factor IF-1 [Prevotella disiens FB035-09AN]
 gi|324988132|gb|EGC20099.1| translation initiation factor IF-1 [Prevotella multiformis DSM
           16608]
 gi|325483704|gb|EGC86668.1| translation initiation factor IF-1 [Prevotella denticola CRIS
           18C-A]
 gi|326945625|gb|AEA21510.1| translation initiation factor IF-1 [Prevotella denticola F0289]
          Length = 72

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ +E G  I       ISG  +  YI  LPG   KV++  +++ K   G     
Sbjct: 22  FRVELENGVDIT----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70


>gi|188997347|ref|YP_001931598.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932414|gb|ACD67044.1| oxygen-independent coproporphyrinogen III oxidase
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 368

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 7/81 (8%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAA----LAYIQEKSQIWEVIFTGGDPLILSHK 160
           C + C +C     V  +    L  +  EA     L Y+     I  + F GG P  L  +
Sbjct: 12  CNIKCPYCDFTSFVWQED--KLKDRYVEALKKELLMYLDNDFDIQTIYFGGGTPSTLKPE 69

Query: 161 RLQKVLKTLR-YIKHVQILRF 180
           ++ ++++ ++  +KH + L  
Sbjct: 70  KIAEIIEFIKNNVKHQKNLEI 90


>gi|167763123|ref|ZP_02435250.1| hypothetical protein BACSTE_01492 [Bacteroides stercoris ATCC
           43183]
 gi|167699463|gb|EDS16042.1| hypothetical protein BACSTE_01492 [Bacteroides stercoris ATCC
           43183]
          Length = 432

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  +      ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G D  +   + L ++++ +  I  V+ +R H   P   P     +L + ++E   
Sbjct: 196 GVD--LYKRQMLPQLIEKISEIPGVEWIRLHYAYPAHFPM----DLFRVMRERPN 244


>gi|149927643|ref|ZP_01915896.1| pyrroloquinoline quinone biosynthesis protein PqqE [Limnobacter sp.
           MED105]
 gi|149823697|gb|EDM82925.1| pyrroloquinoline quinone biosynthesis protein PqqE [Limnobacter sp.
           MED105]
          Length = 398

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 66/175 (37%), Gaps = 22/175 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L +L + CP++C FC+   +        LS+ + +  +   +    + ++ F+GG+PL+
Sbjct: 17  LLAELTYRCPLHCVFCY-NPVDYKSNTNELSTAEWKETMKQARALGAV-QLGFSGGEPLL 74

Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIH-- 212
               + L      L Y  ++       +     P R     +  LK AG   + ++    
Sbjct: 75  RDDLEELVAYGHELGYYTNLITSGIGLK-----PTR-----LDALKAAGLDHIQVSFQDA 124

Query: 213 ---ANHPYEFSEEAIAAIS---RLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
              AN     ++     +     +  AG  ++   VL +   D  + +  L    
Sbjct: 125 TQAANDALSDTKTFAKKLEIATAVKAAGWPMVLNVVLHRLNLDHIDSIIELAVKL 179


>gi|189426412|ref|YP_001953589.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189422671|gb|ACD97069.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 1288

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 9/129 (6%)

Query: 77   PIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
            PIG+     L        DR++ +     CP  C FC+        +   +  ++ + AL
Sbjct: 1013 PIGEWYARHLPQAQWHIADRVINVHGGRGCPFSCNFCY-HHSKPRYRDIAVMMEEAQEAL 1071

Query: 136  AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195
                       +++   D ++ +  R +++++ +  +         +R  I+   R++  
Sbjct: 1072 QRFDAN-----MLYFSDDLVLATPNRARQLVEAIHRLDRPISFSVSTRFDIL--ARMDDS 1124

Query: 196  LIQCLKEAG 204
            L+Q LK+AG
Sbjct: 1125 LLQELKQAG 1133


>gi|77460368|ref|YP_349875.1| molybdenum cofactor synthesis-like [Pseudomonas fluorescens Pf0-1]
 gi|77384371|gb|ABA75884.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas
           fluorescens Pf0-1]
          Length = 322

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C +C    + +V +Q    LS++     +AY+ E + I  +  TGG+PL+
Sbjct: 15  ISLTSACNYACTYCVPNGKRLVAAQDE--LSAEAMARGVAYLIEAAGIERLRITGGEPLV 72

Query: 157 LSHKRLQKVLKTLRYI 172
               +L+  +  +  +
Sbjct: 73  SP--KLESFMSAVGKM 86


>gi|22711909|ref|NP_683835.1| translation initiation factor 1 [Chaetosphaeridium globosum]
 gi|25008606|sp|Q8M9V4|IF1C_CHAGL RecName: Full=Translation initiation factor IF-1, chloroplastic
 gi|22416913|gb|AAM96513.1| translational initiation factor 1 [Chaetosphaeridium globosum]
          Length = 78

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 5/56 (8%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR++++ G      +   ISG  +  YI  LPG   KV++  +++ K G  +Y + 
Sbjct: 22  FRVSLDNGC----QVLAHISGKIRRNYIRILPGDKVKVELSPYDLTK-GRITYRLR 72


>gi|268610302|ref|ZP_06144029.1| pyruvate formate-lyase activating enzyme [Ruminococcus flavefaciens
           FD-1]
          Length = 247

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 22/191 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P    +     CP+ CR+C   +     KGT  +++D        +E  +   +  TGG+
Sbjct: 17  PGVRFVVFFQGCPLRCRYCHNPDTWEFGKGTERTAEDLMKEYDSYKEFLKSGGITATGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL    + L ++   L   K V      +   +  P+  +  + + LK     +    H 
Sbjct: 77  PL-AQPEFLAELFS-LAKSKGVHTC-LDTSAGVYSPEH-HEAIDKALKYTDLVMLDIKHI 132

Query: 214 NHP---------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL------M 258
           +            E        I  L   GI +  + V++ GI D  + L  L      +
Sbjct: 133 DSAEHKKLTGMGNEHILAFAEHIRDL---GIPVWIRHVVVPGITDQHDELFALGEYLSTL 189

Query: 259 RTFVELRIKPY 269
                L + PY
Sbjct: 190 SNLKALDVLPY 200


>gi|126727641|ref|ZP_01743473.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
           HTCC2150]
 gi|126703057|gb|EBA02158.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
           HTCC2150]
          Length = 424

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 75  EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVL--SS 128
           ED   +    P      R P    L +   C  +C FC     R   V      +L  + 
Sbjct: 118 EDKFEELKDRPK---ARRAPS-AFLTVQEGCDKFCTFCVVPYTRGAEVSRPVDRILREAR 173

Query: 129 KDTEAALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           +  E  +A I    Q +      G D        L ++++ +  I+ ++ +RF +  P
Sbjct: 174 ELVERGVAEINLLGQNVNAYHGEGPDG----DWTLAQLIREMATIEGLERIRFTTSHP 227


>gi|326390905|ref|ZP_08212456.1| biotin and thiamin synthesis associated [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325993053|gb|EGD51494.1| biotin and thiamin synthesis associated [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 466

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 30/165 (18%)

Query: 12  QDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPNDPIARQFIPQKEELNIL 70
           QDL  A     +   EI E +      +TP  A  L+N  + +            E+  +
Sbjct: 16  QDLEKAKKATSKDALEIIEKAKKLK-GITPEEAAVLLNVEDED---------LLNEMFKV 65

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               ++ I              Y +RI+    L + + C   CR+C  R     Q+   L
Sbjct: 66  ARYIKEEI--------------YGNRIVIFAPLYVSNYCVNNCRYCGYRH-SNEQERKKL 110

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           + ++    +  ++E       +  G DP+      +  V+KT+  
Sbjct: 111 TMEEVRREVEILEEMGHKRLAVEAGEDPVNCPIDYIIDVIKTIYD 155


>gi|300725257|ref|YP_003714586.1| putative Radical SAM [Xenorhabdus nematophila ATCC 19061]
 gi|297631803|emb|CBJ92524.1| putative Radical SAM [Xenorhabdus nematophila ATCC 19061]
          Length = 392

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 22/134 (16%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKS-----QIWEVI 148
           I+LK+   C + C +C+   M  S       V+S  +  A   + +  +     ++ +V 
Sbjct: 14  IILKISERCNINCSYCYVFNMGNSLATDSPPVISLDNVLALRGFFERSAAENEIEVIQVD 73

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQCLKEAG 204
           F GG+PL++   R  ++   LR   +       SR+ +   Q     I+ E I   ++  
Sbjct: 74  FHGGEPLMMKKDRFDQMCDILRQGDYS-----GSRLELAL-QTNGILIDDEWISLFEKHK 127

Query: 205 KPVYIAI----HAN 214
               I+I    H N
Sbjct: 128 VHASISIDGPKHIN 141


>gi|297627043|ref|YP_003688806.1| Fe-S oxidoreductase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296922808|emb|CBL57386.1| Fe-S oxidoreductase [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 373

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 51/287 (17%), Positives = 94/287 (32%), Gaps = 47/287 (16%)

Query: 74  REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
              P G  +  P+     R P  I  +L   C + CR C          G + + +    
Sbjct: 1   MSHPAGIGSVKPVNWAYDRAPMIIYWELTTACGLACRHCRATAQPDPAPGELTTDEALGV 60

Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR-FH-SRVPIVDPQR 191
              +    S    VIFTGGDP+      L +++            R    S  P V P  
Sbjct: 61  LDEFAGFGSPAPHVIFTGGDPMRRGD--LDQLIAAANQ-------RGLGVSLAPAVTP-L 110

Query: 192 INPELIQCLKEAGKPVY-------IAIHANHPYEFSEEAIAAISRLAN---AGIILLSQS 241
           ++ + ++ LK               A H +   +      A +  LA+   AG+ +   +
Sbjct: 111 LSAQRLKDLKALDVQAISLSLDGSTAAHHDGIRQVPGTFDATMQALADANAAGVPVQINT 170

Query: 242 VLLKGIND-DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
           +    + D   + L ++        +  + L           F +++  G    + L+E 
Sbjct: 171 L----VTDETAKDLDDVYELLKNYDVMQWSLF----------FLISVGRG----SQLREL 212

Query: 301 ISGLCQPFYILDLPGGYGKV-KIDTHNIKKVGNGSYCITDHHNIVHD 346
             G  +   I      +GK+ +     IK      Y   +   ++H 
Sbjct: 213 TPGDAERTLIK-----WGKIGRTSPFRIKTTEAMQYRRINAQAMMHA 254


>gi|189346205|ref|YP_001942734.1| molybdenum cofactor biosynthesis protein A [Chlorobium limicola DSM
           245]
 gi|189340352|gb|ACD89755.1| molybdenum cofactor biosynthesis protein A [Chlorobium limicola DSM
           245]
          Length = 332

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 68/171 (39%), Gaps = 34/171 (19%)

Query: 99  LKLLHVCPVYCRFCFRREM-----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C + C +C   E      VG      L + D  A L  I     + ++ FTGG+
Sbjct: 20  IAVTSRCNLRCTYCMSEEHECHSSVGHPD--TLKTADV-ALLIRILAGLGVRKIRFTGGE 76

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           PL+ +   + ++++T +    ++ +   +         +  + +  L++AG    + +  
Sbjct: 77  PLLRND--IAELVRTAKDTVGIETVSLTTNGV------LLHKHLDGLRKAGLD-ALNLSI 127

Query: 214 NHPYEFSEEAIAAISR--------------LANAGIILLSQSVLLKGINDD 250
           +       E   AI+R              LA+  I +    V+++GIN D
Sbjct: 128 DT---LDRERYRAITRRDVFEQVKANLDTLLASKTIPVKLNVVMMRGINSD 175


>gi|162450597|ref|YP_001612964.1| hypothetical protein sce2325 [Sorangium cellulosum 'So ce 56']
 gi|161161179|emb|CAN92484.1| hypothetical protein sce2325 [Sorangium cellulosum 'So ce 56']
          Length = 283

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 30/107 (28%)

Query: 188 DPQRINPELIQCLKEAGKPVYI---------------AIHANHPYEFSEEAIAAISRLAN 232
            P  +  E+++ L  AG  V++                 H  H  +F+   +       +
Sbjct: 89  LPATVAEEVVKALANAGLDVWVYRGSDWFIRRRDAPHVTHEEHTVQFAPIVVD------D 142

Query: 233 AGIILLSQSVLLKGINDD----PEILANLMRTF----VELRIKPYYL 271
            G +L + +V + G++DD          L + F       R +PYYL
Sbjct: 143 LGGVLAN-AVKIVGVSDDLALVARCEGELRQRFGAQVSAARSQPYYL 188


>gi|330838436|ref|YP_004413016.1| RNA modification enzyme, MiaB family [Selenomonas sputigena ATCC
           35185]
 gi|329746200|gb|AEB99556.1| RNA modification enzyme, MiaB family [Selenomonas sputigena ATCC
           35185]
          Length = 432

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 17/120 (14%)

Query: 72  EEREDPIG--DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
           +   D +   +    PL G   R   R  LK+   C  +C FC      G  +  +L S 
Sbjct: 120 DGTGDIMHASEFEDIPLFGAPAR--TRAFLKIEEGCENFCSFCIIPYARGPVRSRLLKSV 177

Query: 130 DTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
             EAA   +       E++ T       G D   L    L   ++ +  +  ++ LR  S
Sbjct: 178 RREAA-KLLAM--GFKEIVLTGIHLGCYGRD---LGDVTLADAVRAVLSLPGLKRLRLGS 231


>gi|319940618|ref|ZP_08014961.1| hypothetical protein HMPREF9464_00180 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805984|gb|EFW02742.1| hypothetical protein HMPREF9464_00180 [Sutterella wadsworthensis
           3_1_45B]
          Length = 402

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 8/86 (9%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG--D 153
           R L++L ++C   CR+C  R+     K   ++ ++   A  +  +       +  G   D
Sbjct: 60  RGLIELSNICTANCRYCGIRKANHDVKRYTMTKEEIVEAAVWAADNGYGSVCLQAGERRD 119

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILR 179
                 K ++ + + LR I H++  R
Sbjct: 120 -----EKFIEFICECLREI-HLRTKR 139


>gi|312880406|ref|ZP_07740206.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
 gi|310783697|gb|EFQ24095.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260]
          Length = 603

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 12/62 (19%)

Query: 52  PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
           P  P+ RQ +   +E        +D +      P   IVH   DR+ +++   C   CRF
Sbjct: 212 PRTPVRRQVLADLDE-----GFLQDRM----LVPSTAIVH---DRVAVQVFRGCTRGCRF 259

Query: 112 CF 113
           C 
Sbjct: 260 CQ 261


>gi|307266298|ref|ZP_07547838.1| biotin and thiamin synthesis associated [Thermoanaerobacter
           wiegelii Rt8.B1]
 gi|306918676|gb|EFN48910.1| biotin and thiamin synthesis associated [Thermoanaerobacter
           wiegelii Rt8.B1]
          Length = 466

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 30/165 (18%)

Query: 12  QDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPNDPIARQFIPQKEELNIL 70
           QDL  A     +   EI E +      +TP  A  L+N  + +            E+  +
Sbjct: 16  QDLEKAKKATSKDALEIIEKAKKLK-GITPEEAAVLLNVEDED---------LLNEMFKV 65

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVL 126
               ++ I              Y +RI+    L + + C   CR+C  R     Q+   L
Sbjct: 66  ARYIKEEI--------------YGNRIVIFAPLYVSNYCVNNCRYCGYRH-SNEQERKKL 110

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
           + ++    +  ++E       +  G DP+      +  V+KT+  
Sbjct: 111 TMEEVRREVEILEEMGHKRLAVEAGEDPVNCPIDYIIDVIKTIYD 155


>gi|260566493|ref|ZP_05836963.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 4
           str. 40]
 gi|260156011|gb|EEW91091.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 4
           str. 40]
          Length = 344

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLYSVFIE-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            K +  ++  L        +  + +    S++      R   EL  C     + + +++ 
Sbjct: 86  RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137

Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
             +P +F               I     AGI +   +V LK  ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182


>gi|160940888|ref|ZP_02088228.1| hypothetical protein CLOBOL_05780 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436132|gb|EDP13899.1| hypothetical protein CLOBOL_05780 [Clostridium bolteae ATCC
           BAA-613]
          Length = 453

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 22/123 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  +K+   C  +C +C      G  +      +D EA +  +  +    EV+ TG  
Sbjct: 144 HTRAFIKVQDGCNQFCSYCIIPYARGRVRSR--KPEDVEAEVKGLVAR-GYREVVLTGIH 200

Query: 152 ----------GDPLILSH---KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
                     G P+         L  +++ +  ++ ++ +R  S    ++P+ I  E  +
Sbjct: 201 LSSYGTEHMEGSPVKGGDWDSGPLWDLIERIHRVEGLERIRLGS----LEPRIITREFAE 256

Query: 199 CLK 201
            L 
Sbjct: 257 KLA 259


>gi|145590531|ref|YP_001152533.1| radical SAM domain-containing protein [Pyrobaculum arsenaticum DSM
           13514]
 gi|145282299|gb|ABP49881.1| Radical SAM domain protein [Pyrobaculum arsenaticum DSM 13514]
          Length = 301

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 29/187 (15%), Positives = 61/187 (32%), Gaps = 28/187 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLIL 157
           L     C   C +C+    + +           +     +++  +   V  +   DP   
Sbjct: 27  LNPYTGCGHRCLYCYITSYIPNAFSPRPKEDLIDKVRRDLEKIPRGAVVSLSNSSDPYTP 86

Query: 158 SHKRLQKVLKTLRYIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
              +L  + + +  +   +   +   ++ P+V         +  L+     V + I    
Sbjct: 87  PEAQLG-LTRRVLQMLLERGYKVLIVTKSPLVL------RDLDVLQRHLGRVAVQITITT 139

Query: 216 PYE-----FSEEA------IAAISRLANAGIILLSQSVLLKGI----NDDPEILANLMRT 260
             E         A      + A+ RL+ AGI +   +V L  I    NDD E +  ++  
Sbjct: 140 LREDLAAVLEPGAPRPVGRLEAVRRLSEAGIPV---TVRLDPIIPLLNDDGENIEGVVSK 196

Query: 261 FVELRIK 267
             E   +
Sbjct: 197 AAEAGAR 203


>gi|83311853|ref|YP_422117.1| Acetyl-CoA acetyltransferase [Magnetospirillum magneticum AMB-1]
 gi|82946694|dbj|BAE51558.1| Acetyl-CoA acetyltransferase [Magnetospirillum magneticum AMB-1]
          Length = 400

 Score = 37.4 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 18/73 (24%)

Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG--IILLSQS 241
            P+  P R            G PV +  H  HP E + EA+A +     AG  I   + S
Sbjct: 206 SPVTLPAR-----------KGDPV-VVSHDEHPRETTVEALAKLKAPFRAGGSITAGNAS 253

Query: 242 VLLKGINDDPEIL 254
               G+ND    L
Sbjct: 254 ----GVNDGAAAL 262


>gi|332829284|gb|EGK01938.1| MiaB-like tRNA modifying enzyme [Dysgonomonas gadei ATCC BAA-286]
          Length = 436

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 21/145 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  LK+   C  +C FC     R         +++      AA           E++ 
Sbjct: 148 RTRYFLKVQDGCDYFCSFCTIPFARGRSRNGTIESMVKQAQEVAA-------KGGKEIVL 200

Query: 150 TG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           TG   GD    + +    ++K L  +  ++  R  S    ++P  +  E+I  + ++ + 
Sbjct: 201 TGVNIGDFGRTTGETFFDLIKALDEVDGIERYRISS----IEPNLLTDEIIDFVSKSKR- 255

Query: 207 VYIAIHANHPYEFSEEAIAAISRLA 231
              A H + P +   +A+  + R  
Sbjct: 256 --FAPHFHIPLQSGSDAVLKLMRRR 278


>gi|289577818|ref|YP_003476445.1| biotin and thiamin synthesis associated [Thermoanaerobacter
           italicus Ab9]
 gi|297544104|ref|YP_003676406.1| biotin and thiamin synthesis associated [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|289527531|gb|ADD01883.1| biotin and thiamin synthesis associated [Thermoanaerobacter
           italicus Ab9]
 gi|296841879|gb|ADH60395.1| biotin and thiamin synthesis associated [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 466

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 93  YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y +RI+    L + + C   CR+C  R     Q+   L+ ++    +  ++E       +
Sbjct: 74  YGNRIVIFAPLYVSNYCVNNCRYCGYRH-SNEQQRKKLTMEEVRREVEILEEMGHKRLAV 132

Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171
             G DP+      +  V+KT+  
Sbjct: 133 EAGEDPVNCPIDYIVDVIKTIYD 155


>gi|269792240|ref|YP_003317144.1| RNA modification enzyme, MiaB family [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269099875|gb|ACZ18862.1| RNA modification enzyme, MiaB family [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 439

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 15/110 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151
             R  +K+   C   C +C   ++ G            +  L+ ++   +    EV+ TG
Sbjct: 142 HTRAFVKVQDGCSRGCTYCIVPKLRGPSISRPF-----QEVLSEVRSLVESGALEVVLTG 196

Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
              + L   R     L  +++ L  ++ +  +RF S  P    QR+   L
Sbjct: 197 ---VHLGDYRWDGLDLADLVRALSSVEGLGRIRFGSIEPFGLSQRLLEAL 243


>gi|226361740|ref|YP_002779518.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4]
 gi|226240225|dbj|BAH50573.1| putative ABC transporter substrate-binding protein [Rhodococcus
           opacus B4]
          Length = 325

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 5/57 (8%)

Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342
             +    + A L     GL  P  ++D  G  G++ +    + ++      +T    
Sbjct: 216 PDDGAADLFADL-----GLALPQNLVDQAGAGGRIPLSPERVNELNVDLLVMTGQEG 267


>gi|157364072|ref|YP_001470839.1| radical SAM domain-containing protein [Thermotoga lettingae TMO]
 gi|157314676|gb|ABV33775.1| Radical SAM domain protein [Thermotoga lettingae TMO]
          Length = 432

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 4/73 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           +     C + C  CF       +   +L+ +     +  I   + I  V   GG+PL   
Sbjct: 71  ILPTFNCNLQCIHCFYESKP-DENYQMLNKEYIPLIIDLINRYN-IENVTIGGGEPLT-- 126

Query: 159 HKRLQKVLKTLRY 171
              L+ +L  +  
Sbjct: 127 WPHLRNLLTEILE 139


>gi|119513285|ref|ZP_01632326.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Nodularia spumigena
           CCY9414]
 gi|119462073|gb|EAW43069.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Nodularia spumigena
           CCY9414]
          Length = 316

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 17/131 (12%)

Query: 39  LTPVIANLINPHNPNDPIARQFIPQKEELNILPE-EREDPIGDNNHSPLKGIVHRYPDRI 97
           L+P IA L+  + P   +       ++E   +      D + +   S  +    R  + +
Sbjct: 30  LSPHIAELLQGNEPITEVR-----NEQEFVTMGFLHYGDEV-EQIISKFEN-ARRKKNIL 82

Query: 98  LL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ----EKSQIWEVIFTG 151
                    C   C +CF+ +    Q G  +S +   A + YIQ    E++++++  + G
Sbjct: 83  NFTILPTLACNFSCDYCFQGDH---QHGQFMSPETQSATIRYIQSLIVEENRVFDCKWFG 139

Query: 152 GDPLILSHKRL 162
           G+PL+     L
Sbjct: 140 GEPLLAKETVL 150


>gi|70726083|ref|YP_252997.1| hypothetical protein SH1082 [Staphylococcus haemolyticus JCSC1435]
 gi|68446807|dbj|BAE04391.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 381

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 16/135 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
                +C + C  C     + ++    L        L  I    Q+  +  TGG+P + S
Sbjct: 36  FTTTTLCNMRCSHCAVGYTLQTKDPDALPMDIIYRRLDEI---PQLRTISITGGEP-MFS 91

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215
            K ++ ++K L      + +       +  PQ    ++ + +          +H +H   
Sbjct: 92  KKSIKNIVKPLLKYAKDRGIYVQMNSNLTLPQDRYLDIAEYID--------VMHISHNWG 143

Query: 216 -PYEFSEEAIAAISR 229
              EF++    A+ +
Sbjct: 144 TIQEFTDVGFGAMKK 158


>gi|320010716|gb|ADW05566.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331]
          Length = 361

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 33/155 (21%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKSQIWEVIFTG 151
           +LL L   CP+ C  C           T     D +  + ++     + +  +  V+ TG
Sbjct: 17  LLLGLTRRCPLSCAHCS-----TGSSLTTREEPDADRLVRFVGSFTRENRPDV--VMLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILR-FHSRVPI---VDPQR---INPELIQCLKEAG 204
           G+PL+L       +++ L         R   SR  +   +   R   I P +++ ++   
Sbjct: 70  GEPLLLP-----ALVEELSA-----RARAAGSRTALLSGMFFARSREIPPPVLRAIRGVD 119

Query: 205 K-PVYIAIHANHPYEF-SEEAIAAISRLANAGIIL 237
                +  H  H  E    +   A+ R+   G+ +
Sbjct: 120 HFSASLDAH--HEREIPRADVFRAVHRIRETGVAV 152


>gi|168700072|ref|ZP_02732349.1| molybdenum cofactor biosynthesis protein A [Gemmata obscuriglobus
           UQM 2246]
          Length = 337

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C    +    +  +L+ ++  A +  +     + +V  TGG+PL+  
Sbjct: 26  ISVTDRCNLRCTYCMPENVTFQDRSELLTFEEIVAFVR-VAVPLGVNKVRLTGGEPLM-- 82

Query: 159 HKRLQKVLKTLRYIKHVQIL 178
            K L K+++ L  +  +  +
Sbjct: 83  RKELHKLVRLLTAVPGLTDI 102


>gi|168207240|ref|ZP_02633245.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
           E str. JGS1987]
 gi|170661412|gb|EDT14095.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
           E str. JGS1987]
          Length = 331

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%)

Query: 99  LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C  +          +++  +    +        I +V  TGG+PL+ 
Sbjct: 22  ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 79

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
             + +  ++K +  I  ++ +   +         +  + ++ L E G K V I++     
Sbjct: 80  -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 132

Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           +   E +     ++ + +I +     + +   +V+L+  N   + + +L+    E  I  
Sbjct: 133 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLACENPID- 189

Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320
                          F+ +T  E  +I+   K+ +S      L  P   + + G  GK+
Sbjct: 190 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEGFKGKI 247


>gi|18310772|ref|NP_562706.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
           str. 13]
 gi|20141618|sp|Q9WX96|MOAA_CLOPE RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|18145453|dbj|BAB81496.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
           str. 13]
          Length = 323

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%)

Query: 99  LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C  +          +++  +    +        I +V  TGG+PL+ 
Sbjct: 14  ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 71

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213
             + +  ++K +  I  ++ +   +         +  + ++ L E G K V I++     
Sbjct: 72  -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 124

Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
           +   E +     ++ + +I +     + +   +V+L+  N   + + +L+    E  I  
Sbjct: 125 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLACENPID- 181

Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320
                          F+ +T  E  +I+   K+ +S      L  P   + + G  GK+
Sbjct: 182 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEGFKGKI 239


>gi|312879755|ref|ZP_07739555.1| MiaB-like tRNA modifying enzyme [Aminomonas paucivorans DSM 12260]
 gi|310783046|gb|EFQ23444.1| MiaB-like tRNA modifying enzyme [Aminomonas paucivorans DSM 12260]
          Length = 454

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 10/113 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   CR+C     V  +  +       E     +       EV+ TG  
Sbjct: 152 HTRAFVKVQDGCSHGCRYCIVPR-VRGRSVSRPPEDVLEEVRGLVGS--GCREVVLTGVH 208

Query: 154 -PLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
             L    +   L +++K L  ++ +  LRF S    ++P  +   L+  L E 
Sbjct: 209 LGLYGRDRGTDLGELVKRLARVEGLVRLRFGS----LEPFGLGESLLDVLGET 257


>gi|254292479|ref|YP_003058502.1| MiaB-like tRNA modifying enzyme [Hirschia baltica ATCC 49814]
 gi|254041010|gb|ACT57805.1| MiaB-like tRNA modifying enzyme [Hirschia baltica ATCC 49814]
          Length = 435

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 64/178 (35%), Gaps = 34/178 (19%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
            + +     + G+  R   R  +++   C   C FC      G+ + +V + +  +    
Sbjct: 135 SVTETAGHLVDGLEGR--ARAFVQVQTGCDHRCTFCIIPYGRGNSR-SVPAGEVVDQVRQ 191

Query: 137 YIQEKSQIWEVIFTGGD----PLILSH-KRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQ 190
            + +    +EV+ TG D       L +   L  ++  +  +   ++ LR  S +  ++  
Sbjct: 192 LVAKGH--YEVVLTGVDLTSWGADLPNAPNLGNLVARILKLAPDLKQLRL-SSIDAIE-- 246

Query: 191 RINPELIQCLKEAGKPVYIAIHAN---------------HPYEFSEEAIAAISRLANA 233
            I+ +L   +    K +   +H +               H  E   +AI    RL  A
Sbjct: 247 -IDDQLFDLIA-HDKRIAPHLHLSFQSGDNMILKRMKRRHSRE---DAINLCQRLRAA 299


>gi|240143426|ref|ZP_04742027.1| radical SAM domain protein [Roseburia intestinalis L1-82]
 gi|257204617|gb|EEV02902.1| radical SAM domain protein [Roseburia intestinalis L1-82]
          Length = 326

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 36/194 (18%)

Query: 99  LKLLHVCPVYCRFCFRR-------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           + +   C   C +C  R             +    + +  E AL   ++      +I TG
Sbjct: 54  INIYRGCSHGCIYCDSRSRCYGFTHAFEDIEVKENAPELLEKALRSKRQ----KCMIGTG 109

Query: 152 G--DPLILSHKRLQKVLKT--LRYIKHVQI-LRFHSRVPIVDPQRI--NPELIQCLKEAG 204
              DP +   +RL  +L    L  I   +  +   ++       RI  + +L+  + E  
Sbjct: 110 AMCDPYLHVEERL--LLTRRCLELIDRYEFGVAVQTKS-----ARILRDFDLLTSINEKA 162

Query: 205 KPVYIAIHANHPYEF----------SEEAIAAISRLANAGII-LLSQSVLLKGINDDPEI 253
           K +       +  +           ++E I  + +   AGI  ++  + +L  IND  + 
Sbjct: 163 KAIVQITLTTYDEDLCKKIEPDVSTTKERIDVLMKCKEAGIPTVVWLTPILPFINDTADN 222

Query: 254 LANLMRTFVELRIK 267
           + NL+   V+  +K
Sbjct: 223 IKNLLDACVDAGVK 236


>gi|220905208|ref|YP_002480520.1| thiamine biosynthesis protein ThiH [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869507|gb|ACL49842.1| Radical SAM domain protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. ATCC 27774]
          Length = 463

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 14/120 (11%)

Query: 58  RQFIPQKEELNILPEEREDPI-GDNNHSPLKGIVHR-YPDRILL----KLLHVCPVYCRF 111
            Q +P   +  +     +DP+  +   +    +  R Y DR++L     L + C   C +
Sbjct: 38  MQMVPLDADEIVALMRVDDPVEHERILAVADEVKQRVYGDRMVLSAPLHLSNHCGSECLY 97

Query: 112 CFRREMVGS-QKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           C  R   G  ++  + S +  EAAL  I++   +I   + +G     L +  ++ + + +
Sbjct: 98  CANRRGNGQIERKYMTSPEMREAALRLIRQGHKRI--FLVSGQ----LPNADVEYLAEAI 151


>gi|126660238|ref|ZP_01731354.1| molybdenum cofactor biosynthesis protein A [Cyanothece sp. CCY0110]
 gi|126618477|gb|EAZ89230.1| molybdenum cofactor biosynthesis protein A [Cyanothece sp. CCY0110]
          Length = 247

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 44/180 (24%)

Query: 94  PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT 150
           P RI ++L + C  +C FC+     +G       +    +  + +I+   KS    V F 
Sbjct: 3   PQRISIELTNQCSKHCHFCYNHSHHLGE------TRWQADELVDFIKDCAKSGTKAVSFG 56

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIVDPQRINPELIQCLK-EAGKPVY 208
           GG+PL   +  L +VL  L+ +    + R   S         ++ +L++ L       V+
Sbjct: 57  GGEPLEYPN--LFEVLSELQGV----LFRSITSNGL-----HLHGDLLEKLVIANPDKVH 105

Query: 209 IAIHANHPYEFSEEAIAAISRLA-------NAGIILL------------SQSVLLKGIND 249
           ++IH     E  EE    I+++         +GI LL            SQ +L  GIN 
Sbjct: 106 LSIHY---PEQKEEVKRVINQVKLLDSLGIRSGINLLVPQSKLQVATQTSQMILEAGINR 162


>gi|94266077|ref|ZP_01289795.1| Radical SAM [delta proteobacterium MLMS-1]
 gi|93453360|gb|EAT03791.1| Radical SAM [delta proteobacterium MLMS-1]
          Length = 912

 Score = 37.4 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 29/157 (18%)

Query: 85  PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--S 142
           P   IVH   DR+ L++   C   CRFC    ++         ++    ALA+I++    
Sbjct: 250 PATRIVH---DRLGLEIARGCTRGCRFCQ-AGIIYRPVREREPARLLAEALAHIEQTGFD 305

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQC 199
           ++  +  + GD   + ++ L +++  L   K    +  +R  +         +  E+++ 
Sbjct: 306 EVALLSLSSGDYACI-NELLGRLMDALAQRKVSVSLPSMRVGT---------LTAEMMEQ 355

Query: 200 LKEAGKPVYIAIHANHPYEFSEEA-IAAISRLANAGI 235
           ++   K  +           + EA    + R+ N GI
Sbjct: 356 IRRVRKTGFT---------LAPEAGSERLRRVLNKGI 383


>gi|291531854|emb|CBK97439.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Eubacterium siraeum
           70/3]
          Length = 457

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF +         ++  +  + A+ ++ + S      EV F GG+PL
Sbjct: 101 LHVSHDCNLRCKYCFAQTGDFGGDRMLMKPETGKRAMDFLIKHSANRENLEVDFFGGEPL 160

Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180
           +     + + +K  R I+  H +  RF
Sbjct: 161 MA-WDTVVETVKYARSIEKQHGKNFRF 186


>gi|327535035|gb|AEA93869.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           OG1RF]
          Length = 321

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 10  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 66

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 67  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 95


>gi|294780074|ref|ZP_06745450.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           PC1.1]
 gi|294452826|gb|EFG21252.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           PC1.1]
 gi|323480628|gb|ADX80067.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           62]
          Length = 321

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 10  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 66

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 67  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 95


>gi|291544795|emb|CBL17904.1| DNA repair photolyase [Ruminococcus sp. 18P13]
          Length = 289

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 20/185 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGG--D 153
           + L   C   C +C  R             +  E A+  +++   + +   +I TG   D
Sbjct: 16  MNLYRGCTHGCIYCDARSTCYQMDHPFEDVEVKENAVELLEDALCRKRHRCMIGTGSMSD 75

Query: 154 PLILSHKRLQKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           P I   ++L  +   L  I+     + F ++ P     R + +L++ +    K V     
Sbjct: 76  PYIPLEQQLCHMRSCLELIQRYGFGVTFQTKSPDFL--R-DIDLMEQINHVTKCVVQMTI 132

Query: 213 ANHPYEF----------SEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTF 261
             +              +   +AA+      GI  ++  + LL  IND PE L +++R  
Sbjct: 133 TTYDDVLCRILEPCVAPTSARLAALHACRKRGIPTVVWLTPLLPYINDTPENLRSILRAC 192

Query: 262 VELRI 266
            +  +
Sbjct: 193 RDAGV 197


>gi|257416003|ref|ZP_05592997.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           AR01/DG]
 gi|257157831|gb|EEU87791.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           ARO1/DG]
          Length = 324

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 13  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 70  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98


>gi|257089787|ref|ZP_05584148.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis
           CH188]
 gi|256998599|gb|EEU85119.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis
           CH188]
          Length = 324

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 13  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 70  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98


>gi|257086842|ref|ZP_05581203.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           D6]
 gi|256994872|gb|EEU82174.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           D6]
          Length = 324

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 13  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 70  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98


>gi|257085347|ref|ZP_05579708.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           Fly1]
 gi|256993377|gb|EEU80679.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           Fly1]
          Length = 324

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 13  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 70  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98


>gi|257082638|ref|ZP_05576999.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           E1Sol]
 gi|256990668|gb|EEU77970.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           E1Sol]
          Length = 324

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 13  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 70  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98


>gi|256962021|ref|ZP_05566192.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           Merz96]
 gi|256952517|gb|EEU69149.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           Merz96]
          Length = 324

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 13  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 70  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98


>gi|256958884|ref|ZP_05563055.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           DS5]
 gi|257078915|ref|ZP_05573276.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           JH1]
 gi|256949380|gb|EEU66012.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           DS5]
 gi|256986945|gb|EEU74247.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           JH1]
          Length = 324

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 13  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 70  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98


>gi|256618973|ref|ZP_05475819.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           ATCC 4200]
 gi|256762400|ref|ZP_05502980.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           T3]
 gi|256598500|gb|EEU17676.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           ATCC 4200]
 gi|256683651|gb|EEU23346.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           T3]
          Length = 324

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 13  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 70  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98


>gi|255975948|ref|ZP_05426534.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           T2]
 gi|255968820|gb|EET99442.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis
           T2]
          Length = 324

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 13  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 70  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98


>gi|255972893|ref|ZP_05423479.1| predicted protein [Enterococcus faecalis T1]
 gi|257422717|ref|ZP_05599707.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|255963911|gb|EET96387.1| predicted protein [Enterococcus faecalis T1]
 gi|257164541|gb|EEU94501.1| conserved hypothetical protein [Enterococcus faecalis X98]
          Length = 324

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 13  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 70  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98


>gi|229545922|ref|ZP_04434647.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
           [Enterococcus faecalis TX1322]
 gi|256853030|ref|ZP_05558400.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|229308990|gb|EEN74977.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
           [Enterococcus faecalis TX1322]
 gi|256711489|gb|EEU26527.1| conserved hypothetical protein [Enterococcus faecalis T8]
          Length = 324

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 13  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 70  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98


>gi|229550115|ref|ZP_04438840.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
           [Enterococcus faecalis ATCC 29200]
 gi|229304819|gb|EEN70815.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme
           [Enterococcus faecalis ATCC 29200]
          Length = 321

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           D + L L   C + C +C      G    +K  +L+  +    L  I  K  I +V  TG
Sbjct: 10  DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 66

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           G+PL+  +  L  ++K ++ I  ++ +   +
Sbjct: 67  GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 95


>gi|163747528|ref|ZP_02154878.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanibulbus indolifex
           HEL-45]
 gi|161379206|gb|EDQ03625.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanibulbus indolifex
           HEL-45]
          Length = 434

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 4/91 (4%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP-L 155
             L +   C  +C FC      G++  +  + K  E A   ++    + EV   G +   
Sbjct: 151 AFLTVQEGCDKFCAFCVVPYTRGAEV-SRPAEKVLEEARDLVER--GVREVTLLGQNVNA 207

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                 L  +++ L  +  ++ +R+ +  P 
Sbjct: 208 YHGGMTLADLIRALAKVDGLERIRYTTSHPN 238


>gi|15894635|ref|NP_347984.1| thiamine biosynthesis protein ThiH [Clostridium acetobutylicum ATCC
           824]
 gi|15024290|gb|AAK79324.1|AE007647_4 Thiamine biosynthesis enzyme ThiH [Clostridium acetobutylicum ATCC
           824]
 gi|325508771|gb|ADZ20407.1| thiamine biosynthesis protein ThiH [Clostridium acetobutylicum EA
           2018]
          Length = 472

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 93  YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y +RI+    L L + C   C +C             LS +D +     +Q+       +
Sbjct: 80  YGNRIVMFAPLYLSNYCVNGCVYCPYHHKNKHIARKKLSQEDVKRETIALQDMGHKRLAL 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
             G DP+    + +   +KT+  IKH
Sbjct: 140 EAGEDPVNNPIEYILDCIKTIYSIKH 165


>gi|16331844|ref|NP_442572.1| hypothetical protein sll0098 [Synechocystis sp. PCC 6803]
 gi|3287936|sp|Q55880|RLMN_SYNY3 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|1208474|dbj|BAA10642.1| sll0098 [Synechocystis sp. PCC 6803]
          Length = 350

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 37/206 (17%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWE 146
           GI       + +     C + C FC   +  G     + S +  +  L   +E   ++  
Sbjct: 96  GIPSSKRLTVCVSSQVGCAMDCNFCATGK--GGFIRNLESHEIVDQVLTVQEEFHERVSN 153

Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP----IVDPQRINPELIQCLK 201
           V+F G G+PL+     L +V+K +  +  V  +    R      +  P +I     + L 
Sbjct: 154 VVFMGMGEPLL----NLPQVVKAVECLNQV--VGIGQRALTISTVGLPGKI-----RQLA 202

Query: 202 EAGKPVYIAIHANHPYE-----FSEEAIAA-ISRLAN--------AGIILLSQSVLLKGI 247
           +    V  A+  + P +         A    + +L           G  +  + VLL G+
Sbjct: 203 DRHLQVTFAVSLHAPNQTLRQSLIPSARHYPLEQLLADCRAYVETTGRRVTFEYVLLAGV 262

Query: 248 NDDPEILANLMRTFV----ELRIKPY 269
           ND P     L +        + + PY
Sbjct: 263 NDQPVHAEELAQKLRGFQTHVNLIPY 288


>gi|238759763|ref|ZP_04620921.1| Molybdenum cofactor biosynthesis protein A [Yersinia aldovae ATCC
           35236]
 gi|238701995|gb|EEP94554.1| Molybdenum cofactor biosynthesis protein A [Yersinia aldovae ATCC
           35236]
          Length = 326

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 57/163 (34%), Gaps = 21/163 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  VC   C +C           + LS  +               ++  TGG+P +  
Sbjct: 17  LSVTDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRVSRAFAL-LGTEKIRLTGGEPSMRR 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
                 ++ T+R    ++ L         +  R+  +  Q  ++AG    I +  +   P
Sbjct: 76  D--FTDIIATIRQNPAIRTL-----AVTTNGYRLARDAAQW-RDAGLT-AINVSVDSLDP 126

Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
            +F          + +  I    +AG   +   +VL++ +ND 
Sbjct: 127 RQFHAITGQDKFHQVMQGIDAAFDAGFDKVKINAVLMRDVNDR 169


>gi|224540006|ref|ZP_03680545.1| hypothetical protein BACCELL_04918 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224518373|gb|EEF87478.1| hypothetical protein BACCELL_04918 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 432

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  K      ++    + Y+  K          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--KHVSRPMEEILDEVRYLVSKGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G D  +   + L ++++ +  +  V+ +R H   P   P     +L + ++E   
Sbjct: 196 GVD--LYKKQMLPELIERISEVPGVEWIRLHYAYPAHFPM----DLFRVMRERPN 244


>gi|218131133|ref|ZP_03459937.1| hypothetical protein BACEGG_02738 [Bacteroides eggerthii DSM 20697]
 gi|217986653|gb|EEC52987.1| hypothetical protein BACEGG_02738 [Bacteroides eggerthii DSM 20697]
          Length = 432

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G      +  ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISRPI--EEILDEVRYLVARGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G D  +   + L ++++ +  +  V+ +R H   P   P     +L + ++E   
Sbjct: 196 GVD--LYKKQMLPELIERISDVPGVEWIRLHYAYPAHFPM----DLFRVMRERSN 244


>gi|160882776|ref|ZP_02063779.1| hypothetical protein BACOVA_00737 [Bacteroides ovatus ATCC 8483]
 gi|156111800|gb|EDO13545.1| hypothetical protein BACOVA_00737 [Bacteroides ovatus ATCC 8483]
          Length = 436

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 69/227 (30%), Gaps = 71/227 (31%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G      +  ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGHHISKPI--EEILDEVRYLVSQGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G D      + L ++++ +  I  V+ +R H       P     +L + ++E        
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
                           +                L+ I+D+   +  LMR           
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
                         ++ E+  +++   + ++ G+  +   ++  PG 
Sbjct: 268 --------------VSKEDTYQLIEQFRREVPGIHLRTTLMVGHPGE 300


>gi|310642492|ref|YP_003947250.1| iron-only hydrogenase maturation protein hydg [Paenibacillus
           polymyxa SC2]
 gi|309247442|gb|ADO57009.1| Iron-only hydrogenase maturation protein HydG [Paenibacillus
           polymyxa SC2]
          Length = 470

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 93  YPDRILLK----LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y +RI+L     + + C   C +C  +    S   + L+ ++    +  +QE      V+
Sbjct: 80  YGNRIVLFAPLYVSNHCVNNCEYCGYKHTNDSFTRSRLTPEELVEEVRVLQELGHKRLVL 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
             G DP+      +  ++  LR I  V++
Sbjct: 140 EAGEDPVHCP---IDYIVDCLRQIYEVKV 165


>gi|260170245|ref|ZP_05756657.1| putative Fe-S oxidoreductase [Bacteroides sp. D2]
 gi|315918608|ref|ZP_07914848.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313692483|gb|EFS29318.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 436

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 28/227 (12%), Positives = 70/227 (30%), Gaps = 71/227 (31%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G      +  ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGHHISKPI--EEILDEVRYLVSQGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           G D      + L ++++ +  I  V+ +R H       P     +L + ++E        
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270
                           +                L+ I+D+   +  LMR           
Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267

Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316
                         ++ E+  +++   ++++ G+  +   ++  PG 
Sbjct: 268 --------------VSKEDTYQLIEQFRKEVPGIHLRTTLMVGHPGE 300


>gi|256821212|ref|YP_003142411.1| Radical SAM domain-containing protein [Anaerococcus prevotii DSM
           20548]
 gi|256799192|gb|ACV29846.1| Radical SAM domain protein [Anaerococcus prevotii DSM 20548]
          Length = 518

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 14/112 (12%)

Query: 54  DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
           D I ++ I    + N L  +  + I +   + ++ +         L++   C + C++C 
Sbjct: 89  DAINKESILSATKFNCLTGKTYEQIDEIIDNKIQNVT--------LEVTEKCNLRCKYCI 140

Query: 114 RREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWE---VIFTGGDPLILSH 159
             E     +     + D E    A+ +++  SQ  +   + F GG+PLI   
Sbjct: 141 YNESHPEYRAFGHKNMDWEVAKKAVDFLKAHSQNSDERHIGFYGGEPLINYD 192


>gi|227500012|ref|ZP_03930091.1| radical SAM-family protein [Anaerococcus tetradius ATCC 35098]
 gi|227217909|gb|EEI83196.1| radical SAM-family protein [Anaerococcus tetradius ATCC 35098]
          Length = 518

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 14/112 (12%)

Query: 54  DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113
           D I ++ I    + N L  +  + I +   + ++ +         L++   C + C++C 
Sbjct: 89  DAINKESILSATKFNCLTGKTYEQIDEIIDNKIQNVT--------LEVTEKCNLRCKYCI 140

Query: 114 RREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWE---VIFTGGDPLILSH 159
             E     +     + D E    A+ +++  SQ  +   + F GG+PLI   
Sbjct: 141 YNESHPEYRAFGHKNMDWEVAKKAVDFLKAHSQNSDERHIGFYGGEPLINYD 192


>gi|193216143|ref|YP_001997342.1| radical SAM domain-containing protein [Chloroherpeton thalassium
           ATCC 35110]
 gi|193089620|gb|ACF14895.1| Radical SAM domain protein [Chloroherpeton thalassium ATCC 35110]
          Length = 353

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 1/90 (1%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
            P  ++L +   C + C +C+ R     +    +S +  E AL       + + V  TGG
Sbjct: 8   KPRNVMLMVTGDCNLTCAYCYERGDAKYKSRRPMSLEIAEKALRLAASSGKAFHVQLTGG 67

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           +P +     L+ ++K  R +     +   +
Sbjct: 68  EPTLEQDLVLE-IIKKTRAVSPESTISLQT 96


>gi|169795655|ref|YP_001713448.1| molybdopterin biosynthesis, protein A [Acinetobacter baumannii AYE]
 gi|169148582|emb|CAM86448.1| molybdopterin biosynthesis, protein A [Acinetobacter baumannii AYE]
          Length = 346

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 15/160 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C         K  +LS +      +++ ++  I  +  TGG+PL+  
Sbjct: 29  ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCSFMVQQ-GIESIRITGGEPLM-- 85

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
            + +   ++ L+ +K + + R      +        +  Q LK+AG   + I++ +  P 
Sbjct: 86  RQGIVHFVRDLQALKALGLKRIS----MTTNGHYLAKYAQQLKDAGLDDLNISLDSLDPI 141

Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
              E +    E  +  I    +AG+      VL+K  NDD
Sbjct: 142 QFKELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDD 181


>gi|70607233|ref|YP_256103.1| hypothetical protein Saci_1489 [Sulfolobus acidocaldarius DSM 639]
 gi|68567881|gb|AAY80810.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
          Length = 323

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 22/157 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P     K+   C ++C FC       + +    S++  +  +  ++  S I  + F GG+
Sbjct: 23  PAYATFKVTSRCNLHCSFC--NPSYYNGELGESSTEKVKKMIDNMR-DSSIVVLSFEGGE 79

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
           P       +++ +  L    H         +   +  R+N E    L +    +   +H 
Sbjct: 80  P------TIRQDILELLEYAHDGSFYV---MLTTNGYRLNDESF--LSKLADRIDF-LHY 127

Query: 214 N----HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246
           +    H      +AI  + R  + G+ +  Q+V+ + 
Sbjct: 128 SIDEYHWN---AKAIDNLQRFRDYGLKVNVQTVVTRY 161


>gi|57239481|ref|YP_180617.1| hypothetical protein Erum7550 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58579459|ref|YP_197671.1| hypothetical protein ERWE_CDS_07950 [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161560|emb|CAH58487.1| conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58418085|emb|CAI27289.1| Conserved hypothetical protein [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 413

 Score = 37.4 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 26/130 (20%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R L+++ + C   C FC   +  G+ +         E  +  +++   +   EV+FTG
Sbjct: 126 KSRALIEIQNGCNHECTFCVITKARGNNRSLH-----IEDIITQVKDCVNNGYNEVVFTG 180

Query: 152 GDPLILSHKRLQKVLKT---------LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            D   +S   +    +          L  I  ++ LR  S + + +   I  +LI  +  
Sbjct: 181 VD---ISDFGIDIYGQRMLGVMIKRVLGAIPQLRRLRL-SSIDVAE---IEDDLIDII-- 231

Query: 203 AGKPVYIAIH 212
            G       H
Sbjct: 232 -GNEPRFMPH 240


>gi|329765915|ref|ZP_08257480.1| radical SAM domain-containing protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329137621|gb|EGG41892.1| radical SAM domain-containing protein [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 293

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/85 (15%), Positives = 37/85 (43%), Gaps = 6/85 (7%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDP 154
           ++ ++   C    C FC   +M  S++ +     + +  +  + ++     ++    GD 
Sbjct: 19  LIFQVTLGCSFNECSFC---DMYRSKQYSERPWDEVKLEIDLMAKQLPDTRKIFLADGDA 75

Query: 155 LILSHKRLQKVLKTL-RYIKHVQIL 178
           L L  + + K++K L     +++ +
Sbjct: 76  LNLDSEYIVKIVKYLYEKFPNLERI 100


>gi|308069436|ref|YP_003871041.1| thiamine biosynthesis enzyme thiH [Paenibacillus polymyxa E681]
 gi|305858715|gb|ADM70503.1| Thiamine biosynthesis enzyme ThiH [Paenibacillus polymyxa E681]
          Length = 470

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 93  YPDRILLK----LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y +RI+L     + + C   C +C  +    S   + L+ ++    +  +QE      V+
Sbjct: 80  YGNRIVLFAPLYVSNHCVNNCEYCGYKHTNDSFTRSRLTPEELVEEVRVLQELGHKRLVL 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
             G DP+      +  ++  LR I  V++
Sbjct: 140 EAGEDPVHCP---IDYIVDCLRQIYEVKV 165


>gi|291458549|ref|ZP_06597939.1| tRNA modification enzyme, MiaB family [Oribacterium sp. oral taxon
           078 str. F0262]
 gi|291419082|gb|EFE92801.1| tRNA modification enzyme, MiaB family [Oribacterium sp. oral taxon
           078 str. F0262]
          Length = 460

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 47/125 (37%), Gaps = 26/125 (20%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---- 151
           R  LK+   C  +C +C    + G  +   L   D    +  + E     E++ TG    
Sbjct: 147 RAFLKVQDGCGQFCSYCIIPYLRGEIRSRALP--DILREVRALSE-GGYREIVLTGIHLS 203

Query: 152 -------GD------PLI--LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196
                  GD           L  + L  +++ +  +  ++ +R  S    ++P+ I+ + 
Sbjct: 204 SYGMESCGDRERRERAFNAALPSESLLSLIREVASVSGIERVRLGS----LEPRIISRDF 259

Query: 197 IQCLK 201
           ++ L 
Sbjct: 260 VRALS 264


>gi|213158400|ref|YP_002319698.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           AB0057]
 gi|215483142|ref|YP_002325349.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           AB307-0294]
 gi|301345476|ref|ZP_07226217.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           AB056]
 gi|301510810|ref|ZP_07236047.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           AB058]
 gi|301595060|ref|ZP_07240068.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           AB059]
 gi|332852472|ref|ZP_08434211.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           6013150]
 gi|332871325|ref|ZP_08439874.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           6013113]
 gi|213057560|gb|ACJ42462.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           AB0057]
 gi|213988902|gb|ACJ59201.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           AB307-0294]
 gi|332729174|gb|EGJ60517.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           6013150]
 gi|332731609|gb|EGJ62895.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           6013113]
          Length = 343

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 15/160 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C         K  +LS +      +++ ++  I  +  TGG+PL+  
Sbjct: 26  ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCSFMVQQ-GIESIRITGGEPLM-- 82

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
            + +   ++ L+ +K + + R      +        +  Q LK+AG   + I++ +  P 
Sbjct: 83  RQGIVHFVRDLQALKALGLKRIS----MTTNGHYLAKYAQQLKDAGLDDLNISLDSLDPI 138

Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
              E +    E  +  I    +AG+      VL+K  NDD
Sbjct: 139 QFKELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDD 178


>gi|206901313|ref|YP_002251416.1| heme biosynthesis protein, putative [Dictyoglomus thermophilum
           H-6-12]
 gi|206740416|gb|ACI19474.1| heme biosynthesis protein, putative [Dictyoglomus thermophilum
           H-6-12]
          Length = 326

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 5/105 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--EVIFTGGDPLI 156
             +   C + CR C++     S++            +A   +K       V  TGG+PLI
Sbjct: 9   WHITDFCNLRCRHCYQENFDRSRELPFEKLVHIIEDIATFLKKEGFDRLSVNLTGGEPLI 68

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
                L ++LKTL  +  V  +   +   +  P ++  E  + LK
Sbjct: 69  YP--HLNQILKTLNKVDIVHEINIITNGIL-SPNKVIEESYEKLK 110


>gi|77163772|ref|YP_342297.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrosococcus oceani ATCC
           19707]
 gi|254435338|ref|ZP_05048845.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus oceani
           AFC27]
 gi|123757951|sp|Q3JEH9|MIAB_NITOC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|76882086|gb|ABA56767.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus oceani ATCC
           19707]
 gi|207088449|gb|EDZ65721.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus oceani
           AFC27]
          Length = 447

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 34/157 (21%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151
              + ++  C  YC FC     V         S+  +  +A I    +  + E+   G  
Sbjct: 148 TAFVSVMEGCSKYCSFC-----VVPYTRGEEISRPFDDVIAEIVGLAEQGVREITLLGQN 202

Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
                     GD        L  ++  +  I+ ++ +RF +  P+      +  LIQ   
Sbjct: 203 VNAYRGSIGEGD-----TADLALLIHYVASIEGIERIRFTTSHPV----EFSDSLIQAFA 253

Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238
           E      +  H + P +        +  L   G  +L
Sbjct: 254 EVP---ALVSHLHLPVQ---SGSDRMLSLMKRGHTVL 284


>gi|89069602|ref|ZP_01156941.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola granulosus
           HTCC2516]
 gi|89044800|gb|EAR50900.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola granulosus
           HTCC2516]
          Length = 437

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 5/93 (5%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
              L +   C  +C FC      G++  +  + +  + A A ++    + E+   G +  
Sbjct: 152 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPAERVVDEARALVEA--GVREITLLGQNVN 208

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                   L  +++TL  I  ++ +R+ +  P 
Sbjct: 209 AYHGHEGGLAGLVRTLAAIDGLERIRYTTSHPN 241


>gi|125625194|ref|YP_001033677.1| hypothetical protein llmg_2436 [Lactococcus lactis subsp. cremoris
           MG1363]
 gi|124494002|emb|CAL99000.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
           MG1363]
          Length = 275

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 4/85 (4%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P ++ + L + C   C +CF +EM       + S +D E    Y+++   +  V   GGD
Sbjct: 10  PIKVYIYLTNHCHYECDYCFLKEMKMLNTKEI-SKEDLEKIAYYLEKYK-VPLVAICGGD 67

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           P++     L   ++ L   K+  I+
Sbjct: 68  PILHP--SLINFVQLLSEHKNYPII 90


>gi|20807443|ref|NP_622614.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515967|gb|AAM24218.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 437

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 7/116 (6%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C  YC +C      G  +      ++    +    E     E++ TG  
Sbjct: 142 RTRAYIKIEDGCNQYCTYCIIPYARGPVRSR--KPENIIKEVKKYAEH-GYKEIVLTGIH 198

Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                  L +  L  V+K +  ++ ++ +R  S  P    + +  EL    K    
Sbjct: 199 IASYGRDLKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTEDVVKELANLPKMCRH 254


>gi|254172863|ref|ZP_04879537.1| probable molybdenum cofactor biosynthesis protein A [Thermococcus
           sp. AM4]
 gi|214033019|gb|EEB73847.1| probable molybdenum cofactor biosynthesis protein A [Thermococcus
           sp. AM4]
          Length = 308

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 41/170 (24%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C FC R  +  +   +   +  ++ E  +  I  +  I +V  TGG+P +
Sbjct: 16  ISLTQECNFRCFFCHREGQRFLAKNE---MMPEEIERLVR-IASRLGIRKVKLTGGEPTV 71

Query: 157 LSHKRLQKVLKTLRYI-KHVQILRF---HSRVPIVDPQRINPELIQCLKEAGK-PVYIAI 211
                   +++ +R I  +V+ L      SR+          EL + L +AG   V +++
Sbjct: 72  RED-----IIEIVRRIKPYVKDLSMTTNGSRL---------KELAEPLAKAGLDRVNVSL 117

Query: 212 HANHP---YEFSEE---------AIAAISRLANAGIILLSQSVLLKGIND 249
           H+  P      +              A+  L+      L+ +V +KG+ND
Sbjct: 118 HSLKPDVYKRITGVDIFETVLEGIEEAVKYLSPVK---LNMTV-MKGLND 163


>gi|197103746|ref|YP_002129123.1| molybdenum cofactor biosynthesis protein A [Phenylobacterium
           zucineum HLK1]
 gi|196477166|gb|ACG76694.1| molybdenum cofactor biosynthesis protein A [Phenylobacterium
           zucineum HLK1]
          Length = 341

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 3/73 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C + C +C    M    K  VL+ ++ +   +       + ++  TGG+PL+  
Sbjct: 27  LSVTDRCDLRCVYCMAEHMTFLPKAQVLTLEELDRIASAFVA-LGVRKLRLTGGEPLV-- 83

Query: 159 HKRLQKVLKTLRY 171
            K + ++++ L  
Sbjct: 84  RKGVMELIEALSR 96


>gi|170782849|ref|YP_001711183.1| molybdenum cofactor biosynthesis protein A [Clavibacter
           michiganensis subsp. sepedonicus]
 gi|169157419|emb|CAQ02608.1| molybdenum cofactor biosynthesis protein A [Clavibacter
           michiganensis subsp. sepedonicus]
          Length = 361

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 19/163 (11%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C   E +  +     L   + E  +        + +V FTGG+PL+ 
Sbjct: 40  ISLTDRCNLRCTYCMPAEGLPFTPDRQALQLAEIERLVRIGTRDLGVRQVRFTGGEPLLR 99

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
               L +++     +     +   +               Q LK+AG   + +++ + H 
Sbjct: 100 RD--LIEIIAACAALPDRPEISLTTNAIG------LASRAQALKDAGLDRINVSLDSVHA 151

Query: 217 YEFSEEAIAAISRLANAGI---------ILLSQSVLLKGINDD 250
             F              GI          +   +VL++G+NDD
Sbjct: 152 ETFRLITRRPFLDRVLDGIDAAAAAGLTPIKINAVLVRGVNDD 194


>gi|159041911|ref|YP_001541163.1| radical SAM domain-containing protein [Caldivirga maquilingensis
           IC-167]
 gi|157920746|gb|ABW02173.1| Radical SAM domain protein [Caldivirga maquilingensis IC-167]
          Length = 384

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 12/108 (11%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +   +   C + C  C+     G      L++++    +    E   +  ++FTGG+PL+
Sbjct: 38  VSWNITRRCNLKCLHCYISA--GDADENELTTEEAMNLVEQFSELK-VPLILFTGGEPLM 94

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                    L  L +    + +R            I  E+   L EAG
Sbjct: 95  RGD------LIKLAHYARDKGIRIALSTNGTL---ITREMASKLAEAG 133


>gi|310828942|ref|YP_003961299.1| hypothetical protein ELI_3376 [Eubacterium limosum KIST612]
 gi|308740676|gb|ADO38336.1| hypothetical protein ELI_3376 [Eubacterium limosum KIST612]
          Length = 346

 Score = 37.4 bits (86), Expect = 3.4,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 46/151 (30%), Gaps = 12/151 (7%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
            R L++  + C   C +C  R   G  K   LS  +     A   +      V+  G DP
Sbjct: 52  TRGLIEFSNYCKNDCYYCGIRRGNGCVKRYRLSEDNIMDCCATGYKLGFRTFVLQGGEDP 111

Query: 155 LILSHKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
              +  R+ +++  +R       I     L    R      +       + L       +
Sbjct: 112 WF-NDDRMCRIVGRIRHTYPDCAI----TLSLGERSAESYKRLYAAGANRYLLRHETANF 166

Query: 209 IAIHANHPYEFSEEAIAAI-SRLANAGIILL 238
              H  HP   S E        L + G  + 
Sbjct: 167 SHYHTLHPKALSPERRQRCLYNLKSIGYQVG 197


>gi|332675311|gb|AEE72127.1| putative oxygen-independent coproporphyrinogen-III oxidase
           [Propionibacterium acnes 266]
          Length = 407

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 22/125 (17%)

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGS 120
           P    +       ++ + + +  P  G    Y        +  C   C +C F   ++ +
Sbjct: 6   PYPRIMRRTMTHADNSLPELH--PADGPWSIY------LHVPFCASRCGYCDFNTYVLSA 57

Query: 121 QKGTV------LSSKDTEAALAYIQ-EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
                       + ++ E A   +   +  +  + F GG P +LS  +L ++      I 
Sbjct: 58  MGDDAVAGYLDAAHQELELAADALGDAQPPVSTIFFGGGTPTMLSPVQLGEL------ID 111

Query: 174 HVQIL 178
           H++ L
Sbjct: 112 HIRTL 116


>gi|325661547|ref|ZP_08150171.1| hypothetical protein HMPREF0490_00905 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472074|gb|EGC75288.1| hypothetical protein HMPREF0490_00905 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 484

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 20/130 (15%)

Query: 80  DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALA 136
           ++         H     + L +   C ++C+ C+       V   K    + K  +A   
Sbjct: 88  EDEEIKAPN-THYIIRTVTLNITDKCNLFCKHCYIGASSRKVQFMK-LQDAKKVVDAIWP 145

Query: 137 YIQEKSQIWEVIFTGGDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           Y+         I +GG+ L+     + L+ +         + ++   +         I P
Sbjct: 146 YM--NPS-CSFIVSGGEALLNPDCIEILEYITSR--GKGKINLVTNGT--------TITP 192

Query: 195 ELIQCLKEAG 204
           EL   L +  
Sbjct: 193 ELADKLSKIR 202


>gi|325263702|ref|ZP_08130435.1| radical SAM protein, family [Clostridium sp. D5]
 gi|324030740|gb|EGB92022.1| radical SAM protein, family [Clostridium sp. D5]
          Length = 308

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 30/147 (20%)

Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169
           R C   E + + K  +   +   + +AY+Q  +  +  +            RL+++    
Sbjct: 62  RACSISEQIAAGKRELSGKRPVHSYIAYLQAYTNTYAPVC-----------RLEELYMEA 110

Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYI--AIHANHP--------- 216
                V+IL   +R     P  +  ++++ L      KPV+I   +   HP         
Sbjct: 111 IADPEVRILSIATR-----PDCLGTDVLELLGRINRIKPVWIELGLQTIHPATARYIRRG 165

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVL 243
           YE       A+  L + GI ++  ++L
Sbjct: 166 YEL-PVFEKAVRDLRSMGITVIVHTIL 191


>gi|312886291|ref|ZP_07745904.1| MiaB-like tRNA modifying enzyme [Mucilaginibacter paludis DSM
           18603]
 gi|311301236|gb|EFQ78292.1| MiaB-like tRNA modifying enzyme [Mucilaginibacter paludis DSM
           18603]
          Length = 440

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 14/126 (11%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151
             R  LK+   C   C FC      G+ +   +     E A A I   S + E++ TG  
Sbjct: 142 RTRTFLKVQDGCDYSCTFCTIPLARGASRSDTV-ESVLEQARA-IAA-SGVKEIVLTGVN 198

Query: 152 -GDPLI---LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
            GD  I       +   ++K L  +  +  +R  S    ++P  +  E+I+      K  
Sbjct: 199 IGDYGIRDGKREHKFFDLVKALDEVDGIDRIRISS----IEPNLLTDEIIE-FVAVSKRF 253

Query: 208 YIAIHA 213
               H 
Sbjct: 254 APHFHI 259


>gi|288932367|ref|YP_003436427.1| radical SAM protein [Ferroglobus placidus DSM 10642]
 gi|288894615|gb|ADC66152.1| Radical SAM domain protein [Ferroglobus placidus DSM 10642]
          Length = 506

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 23/153 (15%)

Query: 67  LNILPEEREDPIGDNNHSPLK-GI--VHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQK 122
                   E+P  D    P   G+   H+    +L + L + C + C +CF      ++K
Sbjct: 59  FGADGYGIENPQVDEVDCPFTCGLCRAHKSHTALLNIVLTNRCNIACWYCF----FYAKK 114

Query: 123 GTVLSSKDTEAALAYIQEKSQI-----WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHV 175
              +     E     ++    +       V  TGG+P  L    L +++K +    I HV
Sbjct: 115 AGYVYEPTIEQIRHMVRVAKNLKPVGCNAVQLTGGEP-TLRDD-LVEIVKAIKEEGIDHV 172

Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           Q+     R+        +PEL+  L+EAG    
Sbjct: 173 QLNTNGLRLAE------DPELVMSLREAGVNTI 199


>gi|261417376|ref|YP_003251059.1| hypothetical protein Fisuc_2997 [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373832|gb|ACX76577.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302328091|gb|ADL27292.1| radical SAM protein, TIGR01212 family [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 295

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 24/146 (16%)

Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI---LSHKRLQ 163
           C +C  R          +S +  E    YI           I     P        + L+
Sbjct: 45  CSYCNNRSFSPVFDEAKVSIQ--EQLKKYIPKLRDKYPNAGILAYLQPYTNTHAPLEHLR 102

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEFS- 220
           +++  +   K +  L   +R     P  +  E I+ L E    KP+ + I      + + 
Sbjct: 103 EIIDPIIKHKEIAGLAIGTR-----PDCLEDEKIEYLAELNHKKPIIVEIGLQTANDLTL 157

Query: 221 ---------EEAIAAISRLANAGIIL 237
                     E   A+ R   AG+ +
Sbjct: 158 AGINRRHTLAEFEDAVKRCQAAGLTV 183


>gi|238783774|ref|ZP_04627793.1| hypothetical protein yberc0001_24510 [Yersinia bercovieri ATCC
           43970]
 gi|238715325|gb|EEQ07318.1| hypothetical protein yberc0001_24510 [Yersinia bercovieri ATCC
           43970]
          Length = 394

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 26/170 (15%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQE 140
           S  K I H     I+LK+   C + C +C+   +   +       +S+K+ E  + ++Q 
Sbjct: 5   SSKKSIQHL---EIILKISERCNINCDYCYVFNKGNSIADNSPARISNKNIEQLVYFLQR 61

Query: 141 -----KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ-ILRFHSRVPIVDPQRINP 194
                     ++ F GG+PL++  +    +   L    + +  +    +        I+ 
Sbjct: 62  ACLEYDIATLQIDFHGGEPLLMKKENFASMCDQLTTADYGRSNISLALQTNGTL---IDD 118

Query: 195 ELIQCLKEAGKPVYIAI----HANHPYEFSEE-------AIAAISRLANA 233
           E I   ++    V I+I    H N  +    +        +  +  L NA
Sbjct: 119 EWISLFEQYLVYVSISIDGPKHINDRHRLDTKGRSTYEGTVRGLRMLQNA 168


>gi|153003729|ref|YP_001378054.1| molybdenum cofactor biosynthesis protein A [Anaeromyxobacter sp.
           Fw109-5]
 gi|152027302|gb|ABS25070.1| molybdenum cofactor biosynthesis protein A [Anaeromyxobacter sp.
           Fw109-5]
          Length = 351

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 32/209 (15%), Positives = 72/209 (34%), Gaps = 26/209 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + L   C   C +C            +LS  +             +  V  TGG+P +  
Sbjct: 45  VSLTDRCNFRCTYC--SPAAHEPPDALLSRAELARLFRLFAA-LGVRRVRLTGGEPTLRK 101

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPY 217
                +++        ++ +   +        R+  EL++  + AG   + +++    P 
Sbjct: 102 DVV--ELVADAAGTPGIEDVAITTNG-----HRL-DELVEPFRGAGLGALNVSLDTLAPE 153

Query: 218 EFSEEAIAAISRLA-NAGII--------LLSQSVLLKGINDDPEILANLMRTFVELRIKP 268
                +  A       +GI         L   +V++ G+N+D   +A+L+R   +    P
Sbjct: 154 RLRGVSGQAARLERILSGIDAAAGKFRSLKINTVVMPGVNED--EVADLVRYAWDRGALP 211

Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            ++     A G     + + E ++ +   
Sbjct: 212 RFIEQMPFAGGEV---VPLAEVRRRLEEA 237


>gi|78046661|ref|YP_362836.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
 gi|78035091|emb|CAJ22736.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris
           pv. vesicatoria str. 85-10]
          Length = 343

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 15/113 (13%)

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125
            P+    P+ D    PL+ +         L ++  C   C +C   + V    G      
Sbjct: 6   RPDLVTAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGFDSQQR 57

Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           LS    E  +        + +V  TGG+PL+     L  ++  L  I+ ++ L
Sbjct: 58  LSFDQLETLVRAFVS-VGVTKVRLTGGEPLLRRD--LPSLIARLTAIEGIEDL 107


>gi|315185591|gb|EFU19360.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Spirochaeta thermophila DSM 6578]
          Length = 240

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           +     C + C +C   E+V       L  ++  A L   + +  +  V+FTGG+PL+  
Sbjct: 24  VLFTGGCNLRCPYCHNPELVEGDSEDFLPWEEIRAFLT--RRRGILKGVVFTGGEPLL-- 79

Query: 159 HKRLQKVLKTLRYI 172
              L  +++ +R +
Sbjct: 80  KGFLPSLIEEVRGM 93


>gi|309777995|ref|ZP_07672937.1| putative ThiH protein [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914284|gb|EFP60082.1| putative ThiH protein [Erysipelotrichaceae bacterium 3_1_53]
          Length = 472

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 4/89 (4%)

Query: 90  VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
              Y +RI+    L L + C   C +C         +   LS ++    +  +Q+     
Sbjct: 77  QKLYGNRIVMFAPLYLSNYCVNGCVYCPYHYKNKHIRRKKLSQEEIRQEVIALQDMGHKR 136

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
             + TG DP+    + + + ++T+  IKH
Sbjct: 137 LALETGEDPVHSPIEYVLESIRTIYDIKH 165


>gi|300311209|ref|YP_003775301.1| molybdenum cofactor biosynthesis protein A [Herbaspirillum
           seropedicae SmR1]
 gi|300073994|gb|ADJ63393.1| molybdenum cofactor biosynthesis protein A [Herbaspirillum
           seropedicae SmR1]
          Length = 393

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 19/126 (15%)

Query: 55  PI--ARQFIPQKE--ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110
           PI   RQ  P  E   L  +  +    + D+   PL  +         + +   C   C 
Sbjct: 29  PIVDYRQAFPASEAGRLAPMAVQPTGWLSDSLGRPLHDLR--------ISVTDRCNFRCV 80

Query: 111 FCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH-KRLQK 164
           +C  +++   Q        +L+ ++     A       + ++  TGG+PL+  + + L  
Sbjct: 81  YCMPKDVFDKQYQFLPHSDLLTFEELTRVAAQFVAH-GVRKIRLTGGEPLLRKNIETLIG 139

Query: 165 VLKTLR 170
           +L  LR
Sbjct: 140 MLAALR 145


>gi|294338308|emb|CBJ94347.1| hypothetical phage protein (Radical SAM family) [Campylobacter
           phage CPt10]
          Length = 318

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 16/137 (11%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDP 154
           R  +     C   C +C               S+        ++    ++   +  GG+P
Sbjct: 42  RAAIMTTDKCCFSCEYCCNSGFTDFNAAKNTKSEADLKCFNLVKAIFPRLKSAVLCGGEP 101

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L+     L   L   + +K V IL       +           + LKE    + +     
Sbjct: 102 LMC--DYLYNYLDLFKDLKDVTILT----NLLYIKDHY-----KRLKEYR-NLDLVTTY- 148

Query: 215 HPYEFSEEAIAAISRLA 231
           H  + +  +   I RL 
Sbjct: 149 HASQIN--SNQYIERLK 163


>gi|294627927|ref|ZP_06706506.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
 gi|292597841|gb|EFF41999.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
          Length = 343

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 10/97 (10%)

Query: 89  IVHRY--PDRIL-LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEK 141
           +  RY  P R L L ++  C   C +C   + V    G      LS    E  +      
Sbjct: 14  MQDRYGRPLRDLRLSVIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS- 72

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             + +V  TGG+PL+     L  ++  L  I+ ++ L
Sbjct: 73  VGVTKVRLTGGEPLLRRD--LPSLIARLTAIEGIEDL 107


>gi|254479764|ref|ZP_05093042.1| MiaB-like tRNA modifying enzyme [Carboxydibrachium pacificum DSM
           12653]
 gi|214034296|gb|EEB75092.1| MiaB-like tRNA modifying enzyme [Carboxydibrachium pacificum DSM
           12653]
          Length = 429

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 7/116 (6%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C  YC +C      G  +      ++    +    E     E++ TG  
Sbjct: 134 RTRAYIKIEDGCNQYCTYCIIPYARGPVRSR--KPENIIKEVKKYAEH-GYKEIVLTGIH 190

Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                  L +  L  V+K +  ++ ++ +R  S  P    + +  EL    K    
Sbjct: 191 IASYGRDLKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTEDVVKELANLPKMCRH 246


>gi|253576867|ref|ZP_04854192.1| thiamine biosynthesis protein ThiH [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251843734|gb|EES71757.1| thiamine biosynthesis protein ThiH [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 478

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 47/120 (39%), Gaps = 8/120 (6%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLK----LLHVCPVYCRFCFRREM 117
             EE  +L    +D + +  +   + +  R Y +RI+L     + + C   C +C  ++ 
Sbjct: 49  SAEEAAVLLNVEDDVLLEEIYHAAREVKERIYGNRIVLFAPLYVSNYCVNNCEYCGYKQS 108

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
                   L+ ++    +  +Q+       +  G DP       +  +L+ +  I  V++
Sbjct: 109 NRGMVRRRLNREELIREVEVLQQLGHKRLALEAGEDPEHCP---IDYILECIETIYSVKV 165


>gi|298529802|ref|ZP_07017205.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511238|gb|EFI35141.1| Radical SAM domain protein [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 360

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 72/202 (35%), Gaps = 32/202 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154
           +  ++   C + C  C          G +    DT  A + I    Q+    VIFTGG+P
Sbjct: 20  VAWEVTRSCNLACSHCRAEAHPEPYPGEL----DTAQARSLIDTFPQVGNPVVIFTGGEP 75

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKP-VYIAI 211
           L+         +  L      Q LR      ++ P    I PE  + +K +G     I+I
Sbjct: 76  LLRPD------IFELISYADSQGLRC-----VMAPNGTLITPENAKEIKSSGIQRCSISI 124

Query: 212 HANHPYEFS---------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
                 E           E+++A I  L +AG+     + + K   D+ +   ++     
Sbjct: 125 DGPTAQEHDLLRGVPGAFEQSMAGIEYLKSAGVEFQINTTVTK---DNLDKFKDIFNLAR 181

Query: 263 ELRIKPYYLHHPDLAAGTSHFR 284
           +L    +++         +  R
Sbjct: 182 DLGAVAWHIFMLVPTGRGADLR 203


>gi|169825978|ref|YP_001696136.1| coproporphyrinogen III oxidase [Lysinibacillus sphaericus C3-41]
 gi|168990466|gb|ACA38006.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Lysinibacillus
           sphaericus C3-41]
          Length = 501

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 56/136 (41%), Gaps = 17/136 (12%)

Query: 105 CPVYCRFC-FRREMVGSQKGTVLSSK-------DTEAALAYIQEKS-QIWEVIFTGGDPL 155
           CP  C +C F    +GS +     +        +      +++  + +I  + + GG P 
Sbjct: 183 CPTKCAYCTFPAYAIGSNRKQGRVNTFLDGLHIELREMGKWLKNNNMKITSIYWGGGTPT 242

Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
            +    +  + +T+     + + +R  + V    P  I PE ++ LK+ G   + +    
Sbjct: 243 SIEADEMDALYQTMYESFPNPETIREIT-VEAGRPDTITPEKLEVLKKWGIDRISVN--- 298

Query: 214 NHPYEFSEEAIAAISR 229
             P  +++E + AI R
Sbjct: 299 --PQSYTDETLKAIGR 312


>gi|116619443|ref|YP_821599.1| radical SAM domain-containing protein [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116222605|gb|ABJ81314.1| Radical SAM domain protein [Candidatus Solibacter usitatus
           Ellin6076]
          Length = 224

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 10/93 (10%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           +      C + C +C         +GT L+    E  L  +        V+ TGG+P+I 
Sbjct: 22  VFIRTSGCNLRCSWCDTPYTSWRPEGTDLT---LEQILDEVGAHPA-RHVVVTGGEPMIA 77

Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDP 189
               +  + + LR    H+ I    +   + +P
Sbjct: 78  PD--IVALTQRLRARNLHITIETAGT---VFEP 105


>gi|11499262|ref|NP_070500.1| acetolactate synthase, small subunit, putative [Archaeoglobus
           fulgidus DSM 4304]
 gi|2648892|gb|AAB89585.1| acetolactate synthase, small subunit, putative [Archaeoglobus
           fulgidus DSM 4304]
          Length = 137

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 3/78 (3%)

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI-KPY-YLHHPDLAAGT 280
              A   L  AG  +   +VL   + D P  L  + +   +  +   Y Y    +     
Sbjct: 51  TDEAYQALKEAGFTVRLTNVLAVEVEDKPGALHRIAKALGDAGVNIDYVYAFTSEKHKAL 110

Query: 281 SHFRLTI-EEGQKIVASL 297
             FR+   E+ ++++  L
Sbjct: 111 IIFRVDDREKAKEVLEKL 128


>gi|61657478|emb|CAI44390.1| hypothetical protein [Thermotoga sp. KOL6]
          Length = 397

 Score = 37.4 bits (86), Expect = 3.5,   Method: Composition-based stats.
 Identities = 25/161 (15%), Positives = 60/161 (37%), Gaps = 31/161 (19%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY----------IQEKSQIWEVI 148
           +++   CP  C +C       +  G V+  +D +  L Y          +          
Sbjct: 143 IEISRGCPFSCAYC----QTPNIAGRVVRHRDVDVILHYANLGVKHGRKLARFIASNSFG 198

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--GKP 206
           +   + +  + ++++++L  LR +  ++ + F +    V P+ +  E++  +K+    + 
Sbjct: 199 YGSKNGVTPNVEKIEELLFGLRRVG-IEEIYFGTFPSEVRPESVTDEVLSVIKKYVNNRS 257

Query: 207 VYIAIHA-----------NHPYEFSEEAIAAISRLANAGII 236
           V I   +            H  E   +   AI ++A  G  
Sbjct: 258 VVIGAQSGSDRVLKIIKRGHTVE---QVEEAIEKIAAHGFT 295


>gi|192290582|ref|YP_001991187.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
           palustris TIE-1]
 gi|226707378|sp|B3QCQ7|MOAA_RHOPT RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|192284331|gb|ACF00712.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
           palustris TIE-1]
          Length = 344

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 29/168 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C   +M    +  +L+ ++ +   +       + ++  TGG+PL+  
Sbjct: 29  VSITDRCDFRCVYCMAEDMTFLPRADLLTLEELDRLCSAFIA-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLRYIKHVQI-----LRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            + +  ++++L    H++      L      S++      R   EL  C     + V ++
Sbjct: 86  RRNMMSLVRSLSR--HLKTGALDELTLTTNGSQL-----ARFAAELADC---GVRRVNVS 135

Query: 211 IHANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
           +    P EF             A I+    AG+ +   SV+LKG N+D
Sbjct: 136 LDTLDPDEFRRITRWGDLDRVLAGINAARAAGLAVKINSVVLKGSNED 183


>gi|239948170|ref|ZP_04699923.1| oxygen-independent coproporphyrinogen III oxidase [Rickettsia
           endosymbiont of Ixodes scapularis]
 gi|239922446|gb|EER22470.1| oxygen-independent coproporphyrinogen III oxidase [Rickettsia
           endosymbiont of Ixodes scapularis]
          Length = 400

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 11/106 (10%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFTGGDPLILSHKR 161
           C   C +C     V          K  E  + Y   I +   I  + F GG P +++   
Sbjct: 31  CLSXCPYCDFNSHVAGNIDHNQWLKSYETEIEYFKAIIQNKYIKSIFFGGGTPSLMNPVI 90

Query: 162 LQKVLKT---LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           ++ ++     L  I +   +   +     +P     E  +  K AG
Sbjct: 91  VEGIINKISNLAIIDNQTEITIET-----NPTSFETEKFKAFKSAG 131


>gi|115954674|ref|XP_001192785.1| PREDICTED: similar to MGC84142 protein, partial [Strongylocentrotus
           purpuratus]
          Length = 258

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            R+ + + + L   C + C++C   E V  S K  +LS+++             + ++  
Sbjct: 61  QRHHNYLRISLTERCNLRCQYCMPEEGVTLSPKERLLSTEEILHLAKLFVS-EGVDKIRL 119

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           TGG+PL+     + ++++ LR ++ ++ +
Sbjct: 120 TGGEPLVRKD--IVEIIEGLRELEGLKQI 146


>gi|115709894|ref|XP_783948.2| PREDICTED: similar to MGC84142 protein [Strongylocentrotus
           purpuratus]
 gi|115954658|ref|XP_001192455.1| PREDICTED: similar to MGC84142 protein [Strongylocentrotus
           purpuratus]
          Length = 669

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            R+ + + + L   C + C++C   E V  S K  +LS+++             + ++  
Sbjct: 91  QRHHNYLRISLTERCNLRCQYCMPEEGVTLSPKERLLSTEEILHLAKLFVS-EGVDKIRL 149

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           TGG+PL+     + ++++ LR ++ ++ +
Sbjct: 150 TGGEPLVRKD--IVEIIEGLRELEGLKQI 176


>gi|52143547|ref|YP_083282.1| coenzyme PQQ synthesis protein [Bacillus cereus E33L]
 gi|51977016|gb|AAU18566.1| coenzyme PQQ synthesis protein [Bacillus cereus E33L]
          Length = 342

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  E   +   +FTG
Sbjct: 9   PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 64

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 65  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 115

Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260
                   I  H        +  + AI  L    I +   +V+     D  E +A L+  
Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 175

Query: 261 F 261
            
Sbjct: 176 L 176


>gi|78221644|ref|YP_383391.1| radical SAM family protein [Geobacter metallireducens GS-15]
 gi|78192899|gb|ABB30666.1| Radical SAM [Geobacter metallireducens GS-15]
          Length = 293

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 21/122 (17%)

Query: 97  ILLKLLHVCPV-YCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIWEVIFT 150
           ++ ++   C   +C +C      G  K    + K  E   A I          +  V   
Sbjct: 18  LIFQITIGCSQNHCAYC------GMYKMKRFALKPVEEVFAEIDGIPGRYRLHVDRVFLA 71

Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINP---ELIQCLKEAGKP 206
            GD L+   + L  +L  L     ++   R  S      P  +     + ++ L+E    
Sbjct: 72  DGDALVYPFEGLCAILDRLAATFPNLT--RVGSYA---SPNSLTTKSVDELRMLREKRLR 126

Query: 207 VY 208
           + 
Sbjct: 127 IV 128


>gi|309791023|ref|ZP_07685560.1| Elongator protein 3/MiaB/NifB [Oscillochloris trichoides DG6]
 gi|308226938|gb|EFO80629.1| Elongator protein 3/MiaB/NifB [Oscillochloris trichoides DG6]
          Length = 461

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 7/67 (10%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WE 146
              Y +R+ L     CPV C FC    + G         ++++  +  I+         +
Sbjct: 184 ARNYSERLPLLATKGCPVGCNFCCTPRIYG----KTFRIRESDQMIDEIKAHQNFAGKRD 239

Query: 147 VIFTGGD 153
           V F+  D
Sbjct: 240 VRFSFMD 246


>gi|258591742|emb|CBE68043.1| Putative pqq coenzyme synthesis protein (pqqE) [NC10 bacterium
           'Dutch sediment']
          Length = 371

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 47/197 (23%), Positives = 74/197 (37%), Gaps = 33/197 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFTGG 152
           P  I  +L   C + C  C R E + ++    LS+ + +A LA ++   +   +++ TGG
Sbjct: 17  PKLIYWELTRACDLVCTHC-RAEAIAARDPFELSTAEAKALLADLRAFGEPPPQLVMTGG 75

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-----KPV 207
           DPL        ++L+  R I     +      P   P  +  E I  L E G       +
Sbjct: 76  DPLKRPD--FFELLRHGRSIGMPVSV-----APSGTP-LLTAEAIAALAENGVMSMSLSI 127

Query: 208 YIAIHANHPY-----EFSEEAIAAISRLANAGIILLSQSVLLKGIND--DPEILANL--- 257
             A   +H          E  + AI  +  A I L  Q      IN    PE +  L   
Sbjct: 128 DGATAESHDRFRGVAGCFETTMRAIEAVRAAAIPL--Q------INTLVTPETMPELPGV 179

Query: 258 MRTFVELRIKPYYLHHP 274
            R   +L I  + L + 
Sbjct: 180 FRLLRDLGIMRWSLFYL 196


>gi|283777943|ref|YP_003368698.1| coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068]
 gi|283436396|gb|ADB14838.1| Coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068]
          Length = 446

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 20/158 (12%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGG 152
           L   +  C + C FC            V +      +  E     I   +Q  ++   GG
Sbjct: 53  LYIHIPFCEMRCGFCNLFTYSQPADDWVANYLSALGRQMEVVAEQIPA-AQFAQLALGGG 111

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD--PQRINPELIQCLKEAGK-PVYI 209
            P  L    L ++L+ L+    V  +   +    V+  P   + E    L+  G   + +
Sbjct: 112 TPTFLQTAELAQLLEQLKR---VLDVPLGNLPISVEASPATTDDEKFALLRHYGVTRLSL 168

Query: 210 AIHANHPYEF--------SEEAIAAISRLANAGIILLS 239
            I +    +          ++   AI R+  AG  +L+
Sbjct: 169 GIQSFDADDLGAIGRPQKHDDVTRAIERIRRAGFPILN 206


>gi|253580177|ref|ZP_04857444.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251848696|gb|EES76659.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 308

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 17/142 (11%)

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
               + L+K+         +  L   +R   + P+ +   L+  L +  KPV+I +    
Sbjct: 97  YAPVEYLEKIFTEAISHPKIVALSIGTRPDCLSPEIVT--LLSRLNKH-KPVWIELGLQT 153

Query: 216 PYEFSE----------EAIAAISRLANAGIILLSQSVL-LKGIN--DDPEILANLMRTFV 262
            +E +               A+ RL    I ++  ++L L G N  D  E +  L    +
Sbjct: 154 IHESTARYIRRGYPLCVFDDAVKRLRKENIEVIVHTILGLPGENTADILETMEYLNHMDI 213

Query: 263 ELRIKPYYLHHPDLAAGTSHFR 284
           +  IK   LH        + + 
Sbjct: 214 Q-GIKLQLLHVLRGTDLAADYE 234


>gi|251779835|ref|ZP_04822755.1| Fe-S oxidoreductase [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243084150|gb|EES50040.1| Fe-S oxidoreductase [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 444

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 38/147 (25%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C   C FCF  ++    + T+    D ++ L+++Q       V  T      +  + + 
Sbjct: 86  RCSNKCIFCFIDQLPPGMRDTLYFKDD-DSRLSFLQGN----FVTLT-----NMKEEDID 135

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEE 222
                       +I+++H     V     NPEL ++ LK                 F+  
Sbjct: 136 ------------RIIKYHISPINVSVHTTNPELRVKMLK---------------NRFAGN 168

Query: 223 AIAAISRLANAGIILLSQSVLLKGIND 249
            +  + +L +AGI + +Q V +  IN+
Sbjct: 169 ILERLKKLTDAGITINAQVVCIPSINN 195


>gi|268317762|ref|YP_003291481.1| molybdenum cofactor biosynthesis protein A [Rhodothermus marinus
           DSM 4252]
 gi|262335296|gb|ACY49093.1| molybdenum cofactor biosynthesis protein A [Rhodothermus marinus
           DSM 4252]
          Length = 363

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 21/186 (11%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAA 134
           DP          G   R    + + L+  C + CR+C   E +  +    +L+ ++    
Sbjct: 31  DPARSEADVLTDGFGRR-HTYLRISLIEHCNLRCRYCMPEEGLDWTPPEHLLTDEEIIR- 88

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194
           LA +     + ++  TGG+PL+   K +++++  L  +  ++ L   +         + P
Sbjct: 89  LARLFVSQGVTKIRLTGGEPLL--RKGIERIVAELARLPGLRALAMTTNGL------LLP 140

Query: 195 ELIQCLKEAGK-PVYIAIHANHPYEFS--------EEAIAAISRLANAGI-ILLSQSVLL 244
           + +  L+ AG   + I++    P  F         E+ + AI      G   L    V+L
Sbjct: 141 KKLDRLQAAGLTQLNISLDTLRPERFEILTRRKGFEQVLRAIDLAIARGYRPLKVNCVVL 200

Query: 245 KGINDD 250
           +G N+D
Sbjct: 201 RGFNED 206


>gi|212633899|ref|YP_002310424.1| arylsulfatase regulator [Shewanella piezotolerans WP3]
 gi|212555383|gb|ACJ27837.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Shewanella
           piezotolerans WP3]
          Length = 405

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 39/175 (22%)

Query: 84  SPLKGIVHRYPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYI-Q 139
           SP KGI       I+LK+   C + C +C   F+      +   V+  K  +  + +I +
Sbjct: 3   SPTKGID------IVLKISERCNLACTYCYFFFQEMDTFKENTAVIKMKTIDQLVEFINK 56

Query: 140 EKSQIW----EVIFTGGDPLILSHKRLQKVLKTLRY-IK---HVQIL--RFHSRVPIVDP 189
              ++      +   GG+PL++  +    +   LR  I    HV ++     +       
Sbjct: 57  GYDELGIQSINIGLHGGEPLLIKKEHFSSICNRLRENITPEVHVNLMCQTNGT------- 109

Query: 190 QRINPELIQCLKEAGKPVYIAI----HANHPYEFS-------EEAIAAISRLANA 233
             ++ E I   ++    V ++I    H N  Y          ++ +  I  L  A
Sbjct: 110 -LVDSEWISIFEQHKVNVGVSIDGPKHINDKYRIDHNGKGSYDQTVRGIKLLQQA 163


>gi|188590250|ref|YP_001920547.1| Fe-S oxidoreductase [Clostridium botulinum E3 str. Alaska E43]
 gi|188500531|gb|ACD53667.1| Fe-S oxidoreductase [Clostridium botulinum E3 str. Alaska E43]
          Length = 444

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 38/147 (25%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C   C FCF  ++    + T+    D ++ L+++Q       V  T      +  + + 
Sbjct: 86  RCSNKCIFCFIDQLPPGMRDTLYFKDD-DSRLSFLQGN----FVTLT-----NMKEEDID 135

Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEE 222
                       +I+++H     V     NPEL ++ LK                 F+  
Sbjct: 136 ------------RIIKYHISPINVSVHTTNPELRVKMLK---------------NRFAGN 168

Query: 223 AIAAISRLANAGIILLSQSVLLKGIND 249
            +  + +L +AGI + +Q V +  IN+
Sbjct: 169 ILERLKKLTDAGITINAQVVCIPSINN 195


>gi|251799231|ref|YP_003013962.1| radical SAM protein [Paenibacillus sp. JDR-2]
 gi|247546857|gb|ACT03876.1| Radical SAM domain protein [Paenibacillus sp. JDR-2]
          Length = 278

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 30/163 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAY-------IQEKSQIWEV 147
           L     C   C++C+ REM   +   +   +  +    AA  Y        ++   I   
Sbjct: 29  LNPYSGCSFACKYCYVREMPIQKFKQIPWGEWVDIKTNAADIYRNEVNKLRRKNKPINIF 88

Query: 148 IFTGGDPLILSHKRL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           + +  DP     +     +++L+ +       +++  +R P++   R + +LI  LK+  
Sbjct: 89  MSSATDPYQPIEREAGITRRILREMLEAPP-DLIQIQTRSPLI---RKDLDLIVLLKDKC 144

Query: 205 KPVYIAIHANHPYE-----FSEEA------IAAISRLANAGII 236
           + +          E     F+  A      + A+  L +AGI 
Sbjct: 145 EVLVSMT-VETDREDMKRLFAPYAPGIKLRLKALKELHDAGIT 186


>gi|114707677|ref|ZP_01440572.1| molybdenum cofactor biosynthesis protein A [Fulvimarina pelagi
           HTCC2506]
 gi|114536921|gb|EAU40050.1| molybdenum cofactor biosynthesis protein A [Fulvimarina pelagi
           HTCC2506]
          Length = 372

 Score = 37.4 bits (86), Expect = 3.6,   Method: Composition-based stats.
 Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 41/174 (23%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C   +M    K  +L+ ++ +           + ++  TGG+PL+  
Sbjct: 57  VSVTDRCDFRCVYCMAEDMEFLPKRDLLTLEELDRLSTTFIA-KGVKKLRLTGGEPLV-- 113

Query: 159 HKRLQKVLKTLRYIKHVQI---------------LRF-------HSRVPIVDPQRINPEL 196
            K +  ++++L    H++                 RF         R   V    ++ + 
Sbjct: 114 RKNIMYLIRSLSR--HLETGALEELTLTTNGSQLKRFAKDLADAGVRRLNVSVDTLDADK 171

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
            + +   G             E  ++ +  I     AG+ +   +V LKG ND 
Sbjct: 172 FRRITRWG-------------EL-KKVMEGIDAAQEAGLHVKLNAVALKGFNDS 211


>gi|148642712|ref|YP_001273225.1| pyruvate formate-lyase activating enzyme, PflA [Methanobrevibacter
           smithii ATCC 35061]
 gi|148551729|gb|ABQ86857.1| pyruvate formate-lyase activating enzyme, PflA [Methanobrevibacter
           smithii ATCC 35061]
          Length = 234

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 8/68 (11%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           L+  +  CP+ CR+C   E++            K+   A  +I        V+ +GG+PL
Sbjct: 19  LVIFMSKCPLACRYCHNAELLDDNTQLSFEEIKKEINDAADFIDA------VVISGGEPL 72

Query: 156 ILSHKRLQ 163
           + S   ++
Sbjct: 73  VQSDAVIE 80


>gi|222056745|ref|YP_002539107.1| hopanoid biosynthesis associated radical SAM protein HpnH
           [Geobacter sp. FRC-32]
 gi|221566034|gb|ACM22006.1| hopanoid biosynthesis associated radical SAM protein HpnH
           [Geobacter sp. FRC-32]
          Length = 332

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 35/189 (18%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           +YP  ++L+  H+C + C  C R          ++S    E  L  + E      V  TG
Sbjct: 25  KYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMS---LEECLNSVDECPAP-VVTVTG 80

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI---QCLKEAGKPVY 208
           G+P  L       +   L+  KH+                    L+      K    P +
Sbjct: 81  GEPF-LYPHIFDLIDGVLKRGKHI--------------YLCTNALLLEKALDKMRPHPNF 125

Query: 209 -IAIHA-----NHPY--EFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEILANL 257
            + +H       H    E       AI  +  A   G  + + + + K    D   +  L
Sbjct: 126 TLNVHMDGMEETHDRILERKGTFKTAIEAIKKAKKLGFRVCTNTTIFK--ETDLVEIEML 183

Query: 258 MRTFVELRI 266
                E+ +
Sbjct: 184 FSKLEEIGV 192


>gi|62734457|gb|AAX96566.1| hypothetical protein LOC_Os11g47250 [Oryza sativa Japonica Group]
 gi|77552671|gb|ABA95468.1| hypothetical protein LOC_Os11g47250 [Oryza sativa Japonica Group]
          Length = 1004

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 20/102 (19%)

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
              RL            V  LR H R     P  +  +    L+  G P+++  H     
Sbjct: 131 PPTRLAYYAAA------VGRLRLHRR-----PASVAADWC--LRLHGWPIWLVGHTTVVG 177

Query: 218 EF----SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255
                    ++AA   L   G  +     LL G+ D      
Sbjct: 178 RLRLHHRPASVAADWCLRLHGWPI---MPLLLGVYDFAADWC 216


>gi|323699272|ref|ZP_08111184.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio sp. ND132]
 gi|323459204|gb|EGB15069.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio desulfuricans
           ND132]
          Length = 442

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 41/122 (33%), Gaps = 21/122 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           P    LK+   C   CRFC     R          +L+     A         Q+ E+I 
Sbjct: 144 PSYAYLKVSEGCSHNCRFCTIPSIRGPHRSWPVDFLLNEARLLAG--------QVPEIIV 195

Query: 150 TGGDP-LILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            G D     S       L  +L+ L  I  +  LR       + P  +   L+  L++ G
Sbjct: 196 VGQDSTAYGSDLGPGNDLPTLLRGLAAIPDLHWLRI----MYLYPAGLTESLLGLLRDTG 251

Query: 205 KP 206
            P
Sbjct: 252 AP 253


>gi|309785707|ref|ZP_07680338.1| radical SAM superfamily protein [Shigella dysenteriae 1617]
 gi|308926827|gb|EFP72303.1| radical SAM superfamily protein [Shigella dysenteriae 1617]
          Length = 201

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%)

Query: 94  PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148
             R++   +  C  +C FC F +           +    ++ E  A + + + + I  V 
Sbjct: 30  RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVY 89

Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194
           F GG P  LS   L +++ TLR    +     +    RV   D +RI+ 
Sbjct: 90  FGGGMPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138


>gi|316934848|ref|YP_004109830.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
           palustris DX-1]
 gi|315602562|gb|ADU45097.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
           palustris DX-1]
          Length = 344

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 21/164 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL--- 155
           + +   C   C +C   +M    +  +L+ ++ +   +       + ++  TGG+PL   
Sbjct: 29  VSITDRCDFRCVYCMAEDMTFLPRSDLLTLEELDRLCSAFIA-KGVRKLRLTGGEPLVRR 87

Query: 156 -ILS-HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
            ++S  + L + L +   +  + +    S++      R   EL  C       V +    
Sbjct: 88  NMMSLVRSLSRHLDS-GALDELTLTTNGSQL-----ARFAAELADC-GVRRVNVSLDTLD 140

Query: 212 -----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
                      E     +A I     AG+ +   +V+LKG N+D
Sbjct: 141 PVEFRRITRWGELDR-VLAGIDAARAAGLAVKINTVVLKGCNED 183


>gi|167748881|ref|ZP_02421008.1| hypothetical protein ANACAC_03655 [Anaerostipes caccae DSM 14662]
 gi|317470277|ref|ZP_07929671.1| MiaB tRNA modifying enzyme YliG [Anaerostipes sp. 3_2_56FAA]
 gi|167651851|gb|EDR95980.1| hypothetical protein ANACAC_03655 [Anaerostipes caccae DSM 14662]
 gi|316902250|gb|EFV24170.1| MiaB tRNA modifying enzyme YliG [Anaerostipes sp. 3_2_56FAA]
          Length = 445

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 18/119 (15%)

Query: 97  ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
             LK+   C   C +C     R           +  K+   +   +        V+    
Sbjct: 146 AYLKIAEGCDKRCSYCIIPKIRGRF------RSVPMKELLKSARELAASGVTELVLVAQE 199

Query: 153 DPLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
             L        K L  +LK L  ++ ++ +R         P+ I  ELI+ +KE  K V
Sbjct: 200 TTLYGKDLTGKKELPTLLKELCGVEGIEWIRL----LYCYPEEITDELIRTIKEEEKVV 254


>gi|166032752|ref|ZP_02235581.1| hypothetical protein DORFOR_02467 [Dorea formicigenerans ATCC
           27755]
 gi|166027109|gb|EDR45866.1| hypothetical protein DORFOR_02467 [Dorea formicigenerans ATCC
           27755]
          Length = 307

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 21/145 (14%)

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAIHA 213
                 L+K+         ++IL   +R     P  +  +++  L E    KPV+I +  
Sbjct: 98  YAPVDYLRKIFTEAIMHPDIRILSVATR-----PDCLGEDILNLLHELNQIKPVWIELGL 152

Query: 214 NHPYEFS----------EEAIAAISRLANAGIILLSQSVL-LKG--INDDPEILANLMRT 260
              +E +               A+ RL   GI ++  ++L L G  I  + E +  L   
Sbjct: 153 QTIHEDTASYIRRGYDLPVFEHALKRLRQMGIPVIVHTILGLPGEDIKRNLETMHYLNEH 212

Query: 261 FVELRIKPYYLHHPDLAAGTSHFRL 285
            ++  IK   LH          +  
Sbjct: 213 HIQ-GIKLQLLHVLKYTDLADDYLT 236


>gi|70729189|ref|YP_258925.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens
           Pf-5]
 gi|68343488|gb|AAY91094.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens
           Pf-5]
          Length = 322

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 6/76 (7%)

Query: 99  LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L   C   C +C    + +V +Q    LS++     +AY+ E + I  +  TGG+PL+
Sbjct: 15  ISLTSACNYACTYCVPNGKRLVAAQDE--LSAEAMARGVAYLMEAAGIERLRITGGEPLV 72

Query: 157 LSHKRLQKVLKTLRYI 172
               +L+  +  +  +
Sbjct: 73  SP--KLEAFMGAVGRM 86


>gi|320007246|gb|ADW02096.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331]
          Length = 475

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 55/172 (31%), Gaps = 29/172 (16%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQI 144
             R     L   +  C V C FC     +G+             +   A    + + + +
Sbjct: 43  TERKDALSLYLHIPFCEVRCGFCNLFTRIGAPDELTTRYLDALDRQATAVRDALGDDAPV 102

Query: 145 W--EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPI---VDPQRINPEL 196
                 F GG P  L+   L+++             R     S VP+     P     + 
Sbjct: 103 RFTSAAFGGGTPTFLTAGELERLCDIAEK-------RMGADLSAVPLSVETSPSTATADR 155

Query: 197 IQCLKEAGK-PVYIAIHANHPYEFSE--------EAIAAISRLANAGIILLS 239
           +  L + G   V I + +    E           E  AA+ R+  AGI +L+
Sbjct: 156 LAVLADRGTTRVSIGVQSFVDAEARAAVRPQHRSEVEAALGRIREAGIPVLN 207


>gi|171059452|ref|YP_001791801.1| coproporphyrinogen III oxidase [Leptothrix cholodnii SP-6]
 gi|170776897|gb|ACB35036.1| oxygen-independent coproporphyrinogen III oxidase [Leptothrix
           cholodnii SP-6]
          Length = 487

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 23/136 (16%)

Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159
           C   C +C   ++V    G   +     +++ E     +    ++ ++ F GG P  LS 
Sbjct: 91  CESVCYYCACNKIVTRDHGRSTAYIDALARELELVTQTLGRGQRVSQLHFGGGTPTFLSD 150

Query: 160 KRLQKVLKTLRYIKHVQ-----ILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
             L +++  LR   H++      +         DP+ ++ E +  LKE G   V   +  
Sbjct: 151 AELDRLMGELRRHFHIEPHGEYSIEI-------DPRTVSRERLAHLKELGFNRVSFGV-- 201

Query: 214 NHPYEFSEEAIAAISR 229
               +F  +   A+ R
Sbjct: 202 ---QDFDADVQKAVHR 214


>gi|109069068|ref|XP_001083150.1| PREDICTED: condensin-2 complex subunit G2 isoform 3 [Macaca
           mulatta]
 gi|109069070|ref|XP_001083395.1| PREDICTED: condensin-2 complex subunit G2 isoform 5 [Macaca
           mulatta]
 gi|297289763|ref|XP_002803587.1| PREDICTED: condensin-2 complex subunit G2 [Macaca mulatta]
          Length = 1143

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 22/191 (11%)

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
           +  V       +  +     + Y+    +  E + +         K+L  +LK L     
Sbjct: 744 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 797

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
            ++ L   +  P   P+         L+  G    ++IH  H   F  E    +S L + 
Sbjct: 798 DLESL-LQT--PGGKPRGFGEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSILEDT 850

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
           G  L S+  +L  I D  E    L R   + +I   YL           G   F++  ++
Sbjct: 851 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 907

Query: 289 EGQKIVASLKE 299
               I+ ++K 
Sbjct: 908 RSLGIMQTVKG 918


>gi|17533767|ref|NP_494067.1| hypothetical protein F36H5.8 [Caenorhabditis elegans]
 gi|13592422|gb|AAK31519.1| Hypothetical protein F36H5.8 [Caenorhabditis elegans]
          Length = 648

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 5/51 (9%)

Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYY-----LHHPDLAAGTSHF 283
            +QSV+LKGI   P +  +    F E+   P Y     + + D    T +F
Sbjct: 577 YNQSVILKGIETRPAVRRSEHHKFDEIFTLPQYSRTLDITNCDGVEATVYF 627


>gi|333029245|ref|ZP_08457306.1| MiaB-like tRNA modifying enzyme [Bacteroides coprosuis DSM 18011]
 gi|332739842|gb|EGJ70324.1| MiaB-like tRNA modifying enzyme [Bacteroides coprosuis DSM 18011]
          Length = 438

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150
             R  LK+   C  +C +C   F R    +     + ++  +AA        +I      
Sbjct: 148 RTRFFLKVQDGCDYFCTYCTIPFARGFSRNGSIESIVNQAKQAARD---GGKEIVITGVN 204

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            GD    +++    ++K L  ++ ++  R  S    ++P  +  E+I+ + ++ +     
Sbjct: 205 TGDFGKTTNETFIDLVKLLDEVEGIERFRISS----IEPNLLTDEIIEFVAQSKR---FM 257

Query: 211 IHA 213
            H 
Sbjct: 258 PHF 260


>gi|253996369|ref|YP_003048433.1| pyrroloquinoline quinone biosynthesis protein PqqE [Methylotenera
           mobilis JLW8]
 gi|253983048|gb|ACT47906.1| coenzyme PQQ biosynthesis protein E [Methylotenera mobilis JLW8]
          Length = 411

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/94 (18%), Positives = 42/94 (44%), Gaps = 3/94 (3%)

Query: 79  GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138
              N+     +    P  +L ++ + CP++C FC+            L+++    AL   
Sbjct: 19  HAQNNGVAASVTQTQPLWLLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDA 78

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
           ++   I ++  +GG+PL+     +++++   R +
Sbjct: 79  RKLGAI-QLGISGGEPLLRDD--IEEIVVEARKL 109


>gi|155241762|gb|ABT18044.1| heme d1 biosynthesis protein [Heliobacillus mobilis]
          Length = 391

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/121 (14%), Positives = 41/121 (33%), Gaps = 29/121 (23%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQ--EKSQIWEVI 148
           Y   +   +   C ++C  C       S    +    +   + A+ +I       +  ++
Sbjct: 35  YGPVVAWNVSRTCNLHCIHC------YSDSDEIDYPGELTTQEAIKFIDELADFNVPVLL 88

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRF-----HSRVPIVDPQRINPELIQCLKEA 203
            +GG+PL+         +  L      + +R       +         I P++ + +K+ 
Sbjct: 89  LSGGEPLMRPD------IFELVAHASKRNVRVTFSTNGT--------LITPDVAKEIKKY 134

Query: 204 G 204
           G
Sbjct: 135 G 135


>gi|34497708|ref|NP_901923.1| ribosomal RNA large subunit methyltransferase N [Chromobacterium
           violaceum ATCC 12472]
 gi|81655644|sp|Q7NVT9|Y2253_CHRVO RecName: Full=Probable RNA methyltransferase CV_2253
 gi|34103564|gb|AAQ59925.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 352

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 73/217 (33%), Gaps = 42/217 (19%)

Query: 104 VCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161
            C V C FC    M G       L S +  A +A  +    + +V+F G G+P       
Sbjct: 107 GCAVGCTFC----MTGKSGLLRQLGSAEIAAQVALARRIRPVKKVVFMGMGEPA----HN 158

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIAIHANHPY- 217
           ++ VL+ ++++          +  +       R+   L Q   E    + +++H      
Sbjct: 159 MENVLEAIQWLGTDGN--IGHKNLVFSTVGDARVFERLPQL--EVKPALALSLHTTRADL 214

Query: 218 ---------EFSE----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE- 263
                      +     E   A +R    G  +  Q  LL G+ND  E +    R     
Sbjct: 215 REQLLPRAPRIAPAELVELGEAYAR--RVGYPIQYQWTLLAGVNDSQEEMDAAARLLKGK 272

Query: 264 ---LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
              L I PY     +   G    R + E  Q I   L
Sbjct: 273 YGVLNIIPY-----NSVEGDRFQRPSSERVQAIKRYL 304


>gi|32475869|ref|NP_868863.1| MiaB protein- tRNA-thiotransferase [Rhodopirellula baltica SH 1]
 gi|81659862|sp|Q7ULM9|MIAB_RHOBA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|32446412|emb|CAD76240.1| probable MiaB protein-putative tRNA-thiotransferase [Rhodopirellula
           baltica SH 1]
          Length = 479

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 22/141 (15%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLS 127
            E  DP+ D    P          +  L++   C  +C +C     R    G     ++S
Sbjct: 146 HETFDPLRDPTMRPTPF-------QAYLRIQIGCDKFCTYCVVPNTRGPEQGRSPEEIVS 198

Query: 128 SKDTEAALAYIQEK---SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
                A    ++       +      G D        +  +L+ L  I  ++ +    + 
Sbjct: 199 EARVLAEQGALEITLLGQTVNSYRHRGPDG----ETDMAGLLERLHDIDGLKRI----KF 250

Query: 185 PIVDPQRINPELIQCLKEAGK 205
               P+ +   L++ +++  K
Sbjct: 251 VTNYPKDMTARLLETIRDLPK 271


>gi|83854736|ref|ZP_00948266.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp.
           NAS-14.1]
 gi|83842579|gb|EAP81746.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp.
           NAS-14.1]
          Length = 439

 Score = 37.4 bits (86), Expect = 3.7,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 21/125 (16%)

Query: 75  EDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFC----FRREMVGSQKGTVLS 127
            D   ++    LKG       R     L +   C  +C FC     R   V      VL+
Sbjct: 127 TDFPEEDKFEKLKG--RGKATRAPSAFLTVQEGCDKFCAFCVVPYTRGAEVSRPATRVLT 184

Query: 128 SKD--TEAALAYI----QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                 E  +  +    Q  +    V   G D        L +++K L  I  ++ +R+ 
Sbjct: 185 EARELVERGVREVTLLGQNVNAYHGVGEEGADY------TLARLIKELAKIDGLERIRYT 238

Query: 182 SRVPI 186
           +  P 
Sbjct: 239 TSHPN 243


>gi|330835444|ref|YP_004410172.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4]
 gi|329567583|gb|AEB95688.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4]
          Length = 369

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 3/70 (4%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           YP  ++  +   C + C  C+     G+Q+   L       A+        +  ++ +GG
Sbjct: 27  YPSVLVFNVTRNCNLRCLHCYSS--SGTQQFYDLPLSVWIEAVKQ-ASDMGVKHILLSGG 83

Query: 153 DPLILSHKRL 162
           +PL      L
Sbjct: 84  EPLARRDLSL 93


>gi|325297732|ref|YP_004257649.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides
           salanitronis DSM 18170]
 gi|324317285|gb|ADY35176.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides
           salanitronis DSM 18170]
          Length = 433

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 20/115 (17%)

Query: 97  ILLKLLHVCPVYCRFCFR----REMVGSQKGTVLSSKDTE-----AALAYIQEKSQIWEV 147
             LK+   C   C +C         V      +L                I +     E+
Sbjct: 138 AYLKISEGCDRKCAYCAIPIITGRHVSRPMDEILDEVRLLVSQGVKEFQVIAQ-----EL 192

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            + G D  +   + L ++++ +  I  V+ +R H       P R   +L + ++E
Sbjct: 193 TYYGVD--LYKKQMLPELIEKMAAIPGVKWIRLH----YAYPARFPKDLFRVMRE 241


>gi|294011401|ref|YP_003544861.1| molybdenum cofactor biosynthesis protein A [Sphingobium japonicum
           UT26S]
 gi|292674731|dbj|BAI96249.1| molybdenum cofactor biosynthesis protein A [Sphingobium japonicum
           UT26S]
          Length = 334

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 7/78 (8%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + CR+C    M    +  +L+ ++          +  +  +  TGG+PL+  
Sbjct: 22  ISVTDRCDLRCRYCMAERMTFLPRDQILTLEEIALLADLFIAR-GVRRIRLTGGEPLVRR 80

Query: 159 HKRLQKVLKTLRYI-KHV 175
                 ++  +R I +HV
Sbjct: 81  D-----IIDLVRRIGRHV 93


>gi|241764970|ref|ZP_04762968.1| molybdenum cofactor biosynthesis protein A [Acidovorax delafieldii
           2AN]
 gi|241365443|gb|EER60224.1| molybdenum cofactor biosynthesis protein A [Acidovorax delafieldii
           2AN]
          Length = 378

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 7/81 (8%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F ++        +LS ++             + ++  TGG+
Sbjct: 44  ISVTDRCNFRCNYCMPKEVFDKDYAYLPHNALLSFEEITRLARLFMAH-GVRKIRLTGGE 102

Query: 154 PLILSH-KRLQKVLKTLRYIK 173
           PL+  + + L   L  LR I 
Sbjct: 103 PLLRKNVEELVAQLAQLRTID 123


>gi|88705524|ref|ZP_01103234.1| Molybdenum cofactor biosynthesis protein A [Congregibacter
           litoralis KT71]
 gi|88700037|gb|EAQ97146.1| Molybdenum cofactor biosynthesis protein A [Congregibacter
           litoralis KT71]
          Length = 336

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 27/166 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C   C +C   +M    K  VL+ ++  + A A+++    + ++  TGG+PL+ 
Sbjct: 22  LSVTDRCDFRCVYCMAEDMQFVPKSEVLTLEELAQVAQAFVRL--GVRKIRLTGGEPLV- 78

Query: 158 SHKRLQKVLKTLRYIKHVQIL---RFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
               + ++++ L  ++ ++ L      S++     QR    L Q LK+AG K + I++ +
Sbjct: 79  -RHNIMELVEQLGAMEGLEELVMTTNGSQL-----QR----LAQPLKDAGVKRLNISLDS 128

Query: 214 NHPYEFS--------EEAIAAISRLANAGII-LLSQSVLLKGINDD 250
             P  F         E+ IA I     AG   +   +V+++G NDD
Sbjct: 129 LQPRRFRQITRVGHLEQVIAGIDAACTAGFEGIRINAVIMRGDNDD 174


>gi|85707986|ref|ZP_01039052.1| hypothetical protein NAP1_02085 [Erythrobacter sp. NAP1]
 gi|85689520|gb|EAQ29523.1| hypothetical protein NAP1_02085 [Erythrobacter sp. NAP1]
          Length = 336

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 34/168 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C    M    K  VL+ ++  + A  +I     + ++  TGG+PL+ 
Sbjct: 22  LSVTDRCDLRCTYCMPERMTFLPKREVLTLEELYDLASGFI--DRGVTKIRITGGEPLVR 79

Query: 158 SH---------KRLQKVLKTL-------RYIKHVQ-ILRFHSRVPIVDPQRINPELIQCL 200
                      ++L + L+ L       +   H   ++R   R   V    ++ EL   L
Sbjct: 80  RDIVDLIRALGRKLGEGLEELTLTTNATQLADHADALVRAGLRRVNVSLDTLDRELFAKL 139

Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248
                            +     +  I+    +G+ +   +V LKG N
Sbjct: 140 TR--------------RDALPRVLDGIAAAKASGLKVKLNAVALKGAN 173


>gi|327480682|gb|AEA83992.1| pyrroloquinoline quinone biosynthesis protein PqqE [Pseudomonas
           stutzeri DSM 4166]
          Length = 381

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +LL+L + CP+ C FC         +   LS+ +    +A  +    + ++ F+GG+P +
Sbjct: 19  LLLELTYQCPLQCVFCSNPRNFADYRREELSTDEWIDVMAQARAMGAV-QIGFSGGEPTL 77

Query: 157 LSHKRLQKVLKTLRYI 172
                L+ ++     +
Sbjct: 78  RKD--LETLVAEADRM 91


>gi|325969734|ref|YP_004245926.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
 gi|323708937|gb|ADY02424.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
          Length = 296

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 18/148 (12%)

Query: 98  LLKLLHVCPVYCRFC--FRREM---VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           +L +  +CP+ C +C   R      V       +S    +  +  +        +  TGG
Sbjct: 19  VLFITGICPLNCFYCPVSRDRFGKDVMFINDRPVSKF-PDDIIDELDRAGS-NGLAITGG 76

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           DP+++  + ++  L  L    + +    H  + V       IN + I+ L  +G    + 
Sbjct: 77  DPIMVVDRVVE--LVRLLKDTYGRDFHIHMYTHVLN-----INEDAIKKLAGSGID-EVR 128

Query: 211 IHANHPYEFSEEAIAAISRLANAGIILL 238
           IHA +P + S +    +  L +AGI L 
Sbjct: 129 IHAVNPAQLSGKLGL-LKMLKDAGIELG 155


>gi|266621755|ref|ZP_06114690.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium hathewayi DSM
           13479]
 gi|288866581|gb|EFC98879.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium hathewayi DSM
           13479]
          Length = 320

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 23/130 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C  +C +C      G  +   +  +D  A +  +       E++ TG  
Sbjct: 25  HTRAFIKVTDGCNQFCSYCIIPYTRGRVRSRRM--EDVRAEVERLVA-GGYKEIVLTGI- 80

Query: 154 PLILS----------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
              LS           + L  ++  L  +  +  +R  S    ++P+ I  E  + L   
Sbjct: 81  --HLSSYGVDFREEERRTLLDLIVYLHEVDGLLRIRLGS----LEPRIITKEFAEALAAL 134

Query: 204 GKPVYIAIHA 213
            K   +  H 
Sbjct: 135 PK---VCPHF 141


>gi|167945021|ref|ZP_02532095.1| Radical SAM domain protein [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 275

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 7/72 (9%)

Query: 99  LKLLHVCPVYCRFCFRR---EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           + L   C + C  C+        GS+    L++ + +A L  I+E+     V+ TGG+PL
Sbjct: 9   INLTRRCNLACAHCYMDAATREAGSEAE--LTTDEVKALLDQIRERGDDTMVVLTGGEPL 66

Query: 156 ILSHKRLQKVLK 167
           +     L+ ++ 
Sbjct: 67  LRRD--LEALVA 76


>gi|218961411|ref|YP_001741186.1| translation initiation factor IF-1 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167730068|emb|CAO80980.1| translation initiation factor IF-1 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 80

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
           FR+T+E G +I+       SG  +  YI  LPG   KV++  +++ +
Sbjct: 30  FRVTLENGHEIL----AHSSGKMRMNYIRILPGDKVKVELSPYDLTR 72


>gi|302343497|ref|YP_003808026.1| radical SAM domain protein [Desulfarculus baarsii DSM 2075]
 gi|301640110|gb|ADK85432.1| Radical SAM domain protein [Desulfarculus baarsii DSM 2075]
          Length = 297

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 52/131 (39%), Gaps = 17/131 (12%)

Query: 95  DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGG 152
           + IL++    C    C FC        ++  +   +  E  L + Q+  +  + V    G
Sbjct: 23  NSILIQATLGCSHNKCAFCGT---YYDKRFGIKDRQTLEQDLRFAQKHCRRQDRVFVMDG 79

Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILRFH----SRVPIVDPQRINPELIQCLKEAGKPV 207
           D LI+     + +L  +R  +  V+  R      S+   +     + + ++ L+E G  +
Sbjct: 80  DALIMPMAHWEWLLGQIREKLPWVR--RVGSYANSKSIAMK----SDDDLRRLRELGLGI 133

Query: 208 -YIAIHANHPY 217
            Y  + + HP 
Sbjct: 134 LYYGVESGHPD 144


>gi|282165058|ref|YP_003357443.1| hypothetical protein MCP_2388 [Methanocella paludicola SANAE]
 gi|282157372|dbj|BAI62460.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 398

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P ++  ++ H C + C  C      GS+    L S++  A +  +    +++ +I TGG+
Sbjct: 58  PRQVFWEVTHACNLRCLHCVTS--SGSKDNDELDSQEAFALIDRL-ADMKVFYLIITGGE 114

Query: 154 PLILSHKRLQKVLKTLRYI 172
           P +        +L+ LR+I
Sbjct: 115 PFLRPD-----ILELLRHI 128


>gi|257126723|ref|YP_003164837.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Leptotrichia buccalis C-1013-b]
 gi|257050662|gb|ACV39846.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Leptotrichia buccalis C-1013-b]
          Length = 175

 Score = 37.4 bits (86), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 5/78 (6%)

Query: 86  LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
           + GI  RY           C   C  C        + G +L+ +  E     I E + + 
Sbjct: 31  VDGIGLRYS-----LYFAGCSHACPGCHNEYSWNPKHGNILTYEKLEEIAKEINENTLLD 85

Query: 146 EVIFTGGDPLILSHKRLQ 163
            +  +GGDPL    + L+
Sbjct: 86  GITISGGDPLFNPVEMLK 103


>gi|327540187|gb|EGF26778.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodopirellula baltica
           WH47]
          Length = 479

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 22/141 (15%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLS 127
            E  DP+ D    P          +  L++   C  +C +C     R    G     ++S
Sbjct: 146 HETFDPLRDPTMRPTPF-------QAYLRIQIGCDKFCTYCVVPNTRGPEQGRSPEEIVS 198

Query: 128 SKDTEAALAYIQEK---SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184
                A    ++       +      G D        +  +L+ L  I  ++ +    + 
Sbjct: 199 EARVLAEQGALEITLLGQTVNSYRHRGPDG----ETDMAGLLERLHDIDGLKRI----KF 250

Query: 185 PIVDPQRINPELIQCLKEAGK 205
               P+ +   L++ +++  K
Sbjct: 251 VTNYPKDMTARLLETIRDLPK 271


>gi|317013730|gb|ADU81166.1| hypothetical protein HPGAM_01600 [Helicobacter pylori Gambia94/24]
          Length = 418

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       +   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQITGLKRIRIGS 221


>gi|297379507|gb|ADI34394.1| RNA modification enzyme, MiaB family [Helicobacter pylori v225d]
          Length = 418

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       +   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQITGLKRIRIGS 221


>gi|291541239|emb|CBL14350.1| DNA repair photolyase [Roseburia intestinalis XB6B4]
          Length = 326

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 36/194 (18%)

Query: 99  LKLLHVCPVYCRFCFRR-------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           + +   C   C +C  R             +    + +  E AL   ++      +I TG
Sbjct: 54  INIYRGCSHGCIYCDSRSRCYGFTHAFEDIEVKENAPELLEKALRSKRQ----KCMIGTG 109

Query: 152 G--DPLILSHKRLQKVLKT--LRYIKHVQI-LRFHSRVPIVDPQRI--NPELIQCLKEAG 204
              DP +   +RL  +L    L  I   +  +   ++       RI  + +L+  + E  
Sbjct: 110 AMCDPYLHVEERL--LLTRRCLELIDRYEFGVAVQTKS-----ARILRDFDLLTSINEKA 162

Query: 205 KPVYIAIHANHPYEF----------SEEAIAAISRLANAGII-LLSQSVLLKGINDDPEI 253
           K +       +  +           ++E I  + +   AGI  ++  + +L  IND  + 
Sbjct: 163 KAIVQITLTTYDEDLCKKIEPDVSTTKERIDVLMKCKEAGIPTVVWLTPILPFINDTADN 222

Query: 254 LANLMRTFVELRIK 267
           + NL+   V+  +K
Sbjct: 223 IKNLLDACVDAGVK 236


>gi|238927738|ref|ZP_04659498.1| 2-methylthioadenine synthetase [Selenomonas flueggei ATCC 43531]
 gi|238884454|gb|EEQ48092.1| 2-methylthioadenine synthetase [Selenomonas flueggei ATCC 43531]
          Length = 519

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 18/110 (16%)

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQ 139
              PL G+ HR   R  LK+   C  +C FC      G  K   L+  +++ E   A   
Sbjct: 221 EDIPLHGVPHR--TRAFLKIEDGCQNFCSFCIIPYARGPVKSRPLAAVAREMEKLAA--- 275

Query: 140 EKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
             +   EV+ T       G D  +     L    +T    K V+ LR  S
Sbjct: 276 --AGFREVVLTGIHLGAYGID--LPQRPTLADACRTALRTKEVRRLRLGS 321


>gi|237738316|ref|ZP_04568797.1| biotin synthase [Fusobacterium mortiferum ATCC 9817]
 gi|229420196|gb|EEO35243.1| biotin synthase [Fusobacterium mortiferum ATCC 9817]
          Length = 345

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R L+++ + C   C++C  R          +S  +   A+ +I E +     + +G
Sbjct: 31  RGLIEISNKCIKNCKYCGIRRDNHKVDRFSMSKSEIMEAVKWIYENNYASIALQSG 86


>gi|297559674|ref|YP_003678648.1| oxygen-independent coproporphyrinogen III oxidase [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
 gi|296844122|gb|ADH66142.1| oxygen-independent coproporphyrinogen III oxidase [Nocardiopsis
           dassonvillei subsp. dassonvillei DSM 43111]
          Length = 410

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 35/153 (22%)

Query: 76  DPIGDNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFC-----FRREMVGSQKGTVLSS 128
           DP+      P   +      R L   +HV  C   C +C        E+V        S 
Sbjct: 9   DPVPSTGELPGPSLAEL-GGRPLGFYVHVPFCVTRCGYCDFNTYTAEELVSRDGTATASR 67

Query: 129 KDT-EAALAYIQ--------EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
           +   + A+A +         E+  +  +   GG P +LS + L +V+  +R        R
Sbjct: 68  ETYADQAIAEVALADRVLTGERPPVSTLFVGGGTPTLLSAEDLGRVVTAVRE-------R 120

Query: 180 FH--------SRVPIVDPQRINPELIQCLKEAG 204
           F         +     +P+ + P+ +  L+EAG
Sbjct: 121 FGFTPDAELTTEA---NPETVTPDYLARLREAG 150


>gi|261368422|ref|ZP_05981305.1| radical SAM domain protein [Subdoligranulum variabile DSM 15176]
 gi|282569543|gb|EFB75078.1| radical SAM domain protein [Subdoligranulum variabile DSM 15176]
          Length = 484

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C +CF  +     +  ++S +  + AL ++   S      EV F GG+PL
Sbjct: 104 LHVAHTCNLNCSYCFAAQGKFHGEAGLMSFETGKQALDFLVAHSGTRRNLEVDFFGGEPL 163

Query: 156 ILSHKRLQKVLKTLRYIK 173
            ++ +  ++++   R I+
Sbjct: 164 -MNFEVCKQLVAYARSIE 180


>gi|188527091|ref|YP_001909778.1| hypothetical protein HPSH_01480 [Helicobacter pylori Shi470]
 gi|188143331|gb|ACD47748.1| hypothetical protein HPSH_01480 [Helicobacter pylori Shi470]
          Length = 418

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       +   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQITGLKRIRIGS 221


>gi|157691712|ref|YP_001486174.1| coproporphyrinogen III oxidase [Bacillus pumilus SAFR-032]
 gi|157680470|gb|ABV61614.1| coproporphyrinogen oxidase [Bacillus pumilus SAFR-032]
          Length = 499

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 65/170 (38%), Gaps = 18/170 (10%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYP---DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
           +E+ D + +     L+ I   Y    +  +   +  CP  C +C         +   + +
Sbjct: 145 DEKIDLMQEIVDRQLQAIPDLYDLQQEVSIYIGIPFCPTKCAYCTFPAYAIKGQAGRVGT 204

Query: 129 K------DTEAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRF 180
                  + +    +++E   ++  V F GG P  ++ + +  + + + R    V+ +R 
Sbjct: 205 FLFGLHYEMQKIGDWLKEHRIKVTTVYFGGGTPTSITAEEMDLLYEEMYRSFPDVKHIRE 264

Query: 181 HSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
            + V    P  I+P+ ++ L       + I      P  +  E + AI R
Sbjct: 265 VT-VEAGRPDTISPDKLEVLNRYHIDRISIN-----PQSYENETLKAIGR 308


>gi|126736946|ref|ZP_01752681.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp.
           SK209-2-6]
 gi|126721531|gb|EBA18234.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp.
           SK209-2-6]
          Length = 440

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 17/101 (16%)

Query: 96  RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
              L +   C  +C FC     R   V      +L  ++ +  +        + E+   G
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRIL--REAQELVE-----RGVREITLLG 202

Query: 152 GD------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
            +              L +++  L  I  ++ +RF +  P 
Sbjct: 203 QNVNAYHGAGANGDLTLAQLIWELDKIDGLERIRFTTSHPN 243


>gi|89896750|ref|YP_520237.1| hypothetical protein DSY4004 [Desulfitobacterium hafniense Y51]
 gi|89336198|dbj|BAE85793.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 306

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 7/107 (6%)

Query: 56  IARQFIPQKEELNILP-EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114
           + RQ I Q E+L     E +      ++H    G  H    R+ L +   C + CRFC R
Sbjct: 1   MRRQIINQIEQLIETQMEHQLRTPNISDHPCFNGAAHGKKGRLHLPISPACNIQCRFCRR 60

Query: 115 -----REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPL 155
                    G  KG +   +  +     ++   +I  V   G GD L
Sbjct: 61  ACNSKELRPGVAKGILPIEEAVDIVGKALELCPEITVVGIAGPGDAL 107


>gi|260062897|ref|YP_003195977.1| molybdenum cofactor biosynthesis protein MoaA [Robiginitalea
           biformata HTCC2501]
 gi|88784465|gb|EAR15635.1| molybdenum cofactor biosynthesis protein (MoaA) [Robiginitalea
           biformata HTCC2501]
          Length = 327

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 35/225 (15%)

Query: 94  PDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            +R++    L +   C + C +C     +   + + L + +    L  I     + ++  
Sbjct: 6   HNRVINYVRLAVTDRCNLRCNYCMPEHGIDFARKSDLMTVEEMKRLCSILAGLGVDKIRI 65

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VY 208
           TGG+P +   K +  +   L  +  V+ +   S   ++ P       I  +KE G   V 
Sbjct: 66  TGGEPFV--RKGVMDLFAHLGGLPEVREISVTSNATLIGPH------IDRMKELGIQSVN 117

Query: 209 IAIHANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGIN-DDPEILANLMR 259
           I++ A     F+              I +L ++G+ +    V+LKG N  D   +    +
Sbjct: 118 ISLDAIQAETFARITRRDEFDKVYGNIMKLVDSGMEVRINFVVLKGQNESDIYPMME-FQ 176

Query: 260 TFVELRIKPYYLHHPDLA--AGTSHFRLTIEEGQK-IVASLKEKI 301
               +R++       ++    G+  F     +G +     +   I
Sbjct: 177 REFPVRVR----FLEEMPFNGGSRDF-----KGLEWNHRKILGHI 212


>gi|194334839|ref|YP_002016699.1| translation initiation factor IF-1 [Prosthecochloris aestuarii DSM
           271]
 gi|194312657|gb|ACF47052.1| translation initiation factor IF-1 [Prosthecochloris aestuarii DSM
           271]
          Length = 72

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 4/51 (7%)

Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
             + F++ +E G +I+      +SG  +  YI  LPG   KV+I  +++ K
Sbjct: 18  PNAQFKVELENGLEIL----AHVSGKIRMHYIRILPGDKVKVQISPYDLTK 64


>gi|315497313|ref|YP_004086117.1| miab-like tRNA modifying enzyme [Asticcacaulis excentricus CB 48]
 gi|315415325|gb|ADU11966.1| MiaB-like tRNA modifying enzyme [Asticcacaulis excentricus CB 48]
          Length = 443

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 25/148 (16%), Positives = 57/148 (38%), Gaps = 20/148 (13%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
            + +     + G+  +   R  +++ + C   C FC      G       ++ D    ++
Sbjct: 139 SVRETAGHLIDGL--KDRARAYVEVQNGCDHRCTFCIIP--YGRGNSRSAAAGDVVGQIS 194

Query: 137 YIQEKSQIWEVIFTGGDPLILSH-------KRLQKVLKT-LRYIKHVQILRFHSRVPIVD 188
            +       EV+ TG D  + S         +L  ++   L+++ +++ LR  S    +D
Sbjct: 195 RLVA-EGYNEVVLTGVD--LTSWGNDLPGQPQLGHLVARILKHVPNLKRLRLSS----ID 247

Query: 189 PQRINPELIQCL-KEAGKPVYIAIHANH 215
              I+  L++   +E     Y+ +   H
Sbjct: 248 AAEIDDTLLRLFAEEERLAPYLHLSLQH 275


>gi|188586093|ref|YP_001917638.1| MiaB-like tRNA modifying enzyme YliG [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|238066413|sp|B2A3C0|RIMO_NATTJ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|179350780|gb|ACB85050.1| MiaB-like tRNA modifying enzyme YliG [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 444

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 10/113 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW----EVIFTGG 152
             +K+   C  YC +C    + G  +   +     EA     +   ++     +    G 
Sbjct: 146 AYIKIAEGCHNYCSYCAIPLIRGGYRSRTIEDIKIEANHFIEKGSKELTLIAQDTTNYGS 205

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           D  I     L  +L  L  I     +R    V    P RI   LI+ +    K
Sbjct: 206 D--IYGKFSLDTLLDELATIPGDFWIR----VLYAYPTRITDSLIEVINRHEK 252


>gi|197118992|ref|YP_002139419.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197088352|gb|ACH39623.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
          Length = 471

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 8/81 (9%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQIWEVIFTG 151
           P  +LL++   C + C FCF        +   L       E A+A          +  +G
Sbjct: 91  PCSVLLEVTDRCNLQCAFCFADAGPKGTEDPSLERISWLLERAMAAAGAC----SLQLSG 146

Query: 152 GDPLILSHKRLQKVLKTLRYI 172
           G+P  L    L ++++  R I
Sbjct: 147 GEP-TLRDD-LPEIVEAARRI 165


>gi|56963064|ref|YP_174791.1| hypothetical protein ABC1292 [Bacillus clausii KSM-K16]
 gi|56909303|dbj|BAD63830.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 369

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 44/119 (36%), Gaps = 16/119 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           +    +C + C  C     +  +    L     +  +  + E  ++     TGG+P +++
Sbjct: 33  VTTTTLCNMRCEHCAVGYTLSPKDPNPLP---LDLLIRRLDEIPRLRAFSITGGEP-MMN 88

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANH 215
            K +++ +  L    H +     ++       +IN  L   L+      P    +H +H
Sbjct: 89  MKSVREYVVPLLKYAHER----GAKT------QINSNLTMPLERYDLILPYLDVLHISH 137


>gi|238788764|ref|ZP_04632555.1| Molybdenum cofactor biosynthesis protein A [Yersinia frederiksenii
           ATCC 33641]
 gi|238723069|gb|EEQ14718.1| Molybdenum cofactor biosynthesis protein A [Yersinia frederiksenii
           ATCC 33641]
          Length = 326

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 26/181 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  VC   C +C           + LS  +               ++  TGG+P +  
Sbjct: 17  LSITDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRISRAFALLGT-EKIRLTGGEPSMRR 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
                 ++ T+R    ++ L         +  R+  +  Q  +EAG    I +  +   P
Sbjct: 76  D--FTDIIATIRQNPAIRTL-----AVTTNGYRLARDAAQW-REAGLT-AINVSVDSLDP 126

Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRIK 267
            +F          + +  I    +AG   +   +VL++ +ND      NL      ++ +
Sbjct: 127 RQFHTITGQDKFHQVMQGIDAAFDAGFEKVKINAVLMRDVNDR-----NLSAFLHWIKSR 181

Query: 268 P 268
           P
Sbjct: 182 P 182


>gi|167038098|ref|YP_001665676.1| thiamine biosynthesis protein ThiH [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167039189|ref|YP_001662174.1| thiamine biosynthesis protein ThiH [Thermoanaerobacter sp. X514]
 gi|256750838|ref|ZP_05491722.1| biotin and thiamin synthesis associated [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300913216|ref|ZP_07130533.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
           X561]
 gi|307723770|ref|YP_003903521.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
           X513]
 gi|320116504|ref|YP_004186663.1| biotin and thiamin synthesis associated [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166853429|gb|ABY91838.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
           X514]
 gi|166856932|gb|ABY95340.1| biotin and thiamin synthesis associated [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256750173|gb|EEU63193.1| biotin and thiamin synthesis associated [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300889901|gb|EFK85046.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
           X561]
 gi|307580831|gb|ADN54230.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp.
           X513]
 gi|319929595|gb|ADV80280.1| biotin and thiamin synthesis associated [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 466

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 93  YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y +RI+    L + + C   CR+C  R     Q+   L+ ++    +  ++E       +
Sbjct: 74  YGNRIVIFAPLYVSNYCVNNCRYCGYRH-SNEQERKKLTMEEVRREVEILEEMGHKRLAV 132

Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171
             G DP+      +  V+KT+  
Sbjct: 133 EAGEDPVNCPIDYIIDVIKTIYD 155


>gi|229890666|sp|Q5LLM0|MIAB_SILPO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
          Length = 439

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 10/119 (8%)

Query: 75  EDPIGDNNHSPLKGIVHRYPD-RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSK 129
            D   ++    LKG           L +   C  +C FC     R   V      +L   
Sbjct: 128 TDFPEEDKFEKLKGRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRILREA 187

Query: 130 D--TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +   E  +  I    Q     + G  P       L  ++  L  I  ++ +RF +  P 
Sbjct: 188 NELVERGVREITLLGQ-NVNAYHGAGP--NGDMTLAGLIWELDKIDGLERIRFTTSHPN 243


>gi|126649445|ref|ZP_01721686.1| coproporphyrinogen III oxidase [Bacillus sp. B14905]
 gi|126593770|gb|EAZ87693.1| coproporphyrinogen III oxidase [Bacillus sp. B14905]
          Length = 501

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 57/136 (41%), Gaps = 17/136 (12%)

Query: 105 CPVYCRFC-FRREMVGSQKGTVLSSK-------DTEAALAYIQEKS-QIWEVIFTGGDPL 155
           CP  C +C F    +GS +     +        +      ++++ + +I  + + GG P 
Sbjct: 183 CPTKCAYCTFPAYAIGSNRKQGRVNTFLDGLHIELREMGKWLKDNNMKITSIYWGGGTPT 242

Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213
            +    +  + +T+     + + +R  + V    P  I PE ++ LK+ G   + +    
Sbjct: 243 SIEADEMDALYQTMYESFPNPETIREVT-VEAGRPDTITPEKLEVLKKWGIDRISVN--- 298

Query: 214 NHPYEFSEEAIAAISR 229
             P  +++E + AI R
Sbjct: 299 --PQSYTDETLKAIGR 312


>gi|95930672|ref|ZP_01313406.1| TatD-related deoxyribonuclease [Desulfuromonas acetoxidans DSM 684]
 gi|95133324|gb|EAT14989.1| TatD-related deoxyribonuclease [Desulfuromonas acetoxidans DSM 684]
          Length = 460

 Score = 37.0 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           I +R  D + L + + C   C FC  FR   V   +  +    D +  +A I + S   E
Sbjct: 267 IAYRIRDSLYLNITNRCSNRCSFCAKFRDFHVKGHQLKLDHEPDFDEVIAAIGDPSGYEE 326

Query: 147 VIFTG-GDPLI 156
           V+F G G+PL+
Sbjct: 327 VVFCGYGEPLL 337


>gi|327400377|ref|YP_004341216.1| Radical SAM domain-containing protein [Archaeoglobus veneficus
           SNP6]
 gi|327315885|gb|AEA46501.1| Radical SAM domain protein [Archaeoglobus veneficus SNP6]
          Length = 392

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--- 146
           +   P  I  +L   C + C+ C R     +QK    +   TE A   I++ ++  +   
Sbjct: 6   IREKPFIIFWELTRACMLACKHC-RAR---AQKERHPNELTTEEAFNVIEQITEFGKPYP 61

Query: 147 -VIFTGGDPLI 156
            V+ TGGDPL+
Sbjct: 62  LVVITGGDPLM 72


>gi|319955886|ref|YP_004167149.1| type II restriction-modification enzyme, r and m protein
           [Nitratifractor salsuginis DSM 16511]
 gi|319418290|gb|ADV45400.1| type II restriction-modification enzyme, R and M protein
           [Nitratifractor salsuginis DSM 16511]
          Length = 1250

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 16/78 (20%)

Query: 271 LHHPDLAAGTSHFRLTI-EEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
           L   D A G+ HF +++     +I + L+           + D  G   K         +
Sbjct: 522 LTICDPAVGSGHFLVSVLNTILEIKSRLR----------ILFDAEGRRIK-----DYTLE 566

Query: 330 VGNGSYCITDHHNIVHDY 347
           V N    I D    +  Y
Sbjct: 567 VKNDELIIRDDEGELFGY 584


>gi|239826166|ref|YP_002948790.1| coproporphyrinogen III oxidase [Geobacillus sp. WCH70]
 gi|239806459|gb|ACS23524.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. WCH70]
          Length = 501

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 21/164 (12%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALA 136
           I D   + +  +     +  +   +  CP  C +C F    +G ++G+V       A L 
Sbjct: 159 IVDRQLTVVPDLYDLAHEVSIYIGIPFCPTKCAYCTFPAYAIGGRQGSV---DAFLAGLH 215

Query: 137 Y--------IQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPI 186
           Y        ++E+   I  + + GG P  ++ + + ++   +     +V+ +R  + V  
Sbjct: 216 YEMREVGRFLKERGINITTIYYGGGTPTSITAEEMDRLYAEMYQSFPNVERVREIT-VEA 274

Query: 187 VDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
             P  I PE +  LK+     + I      P  + +E + AI R
Sbjct: 275 GRPDTITPEKLNVLKKWNIDRISIN-----PQSYIQETLKAIGR 313


>gi|48926954|gb|AAT47516.1| putative radical SAM superfamily protein [Propionibacterium
           freudenreichii]
          Length = 349

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 2/67 (2%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + + + CP  C  C         +    ++ + E      +E  +I  V+ TGG+P  L 
Sbjct: 15  ISVTNKCPARCAHCL--AESSPSERNHFTASEIEQIYLSARELEEIGLVVMTGGEPTELG 72

Query: 159 HKRLQKV 165
               + +
Sbjct: 73  DDLFEAI 79


>gi|84515221|ref|ZP_01002583.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Loktanella vestfoldensis
           SKA53]
 gi|84510504|gb|EAQ06959.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Loktanella vestfoldensis
           SKA53]
          Length = 436

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 9/95 (9%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153
              L +   C  +C FC     V         S+  +  L   +E   + + E+   G +
Sbjct: 150 TAFLTVQEGCDKFCAFC-----VVPYTRGAEVSRPADRILREARELVDAGVRELTLLGQN 204

Query: 154 --PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                   + L  ++  L  I  ++ +RF +  P 
Sbjct: 205 VNAYHGHERGLAGLIWALTEIDGLERIRFTTSHPN 239


>gi|83941259|ref|ZP_00953721.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp. EE-36]
 gi|83847079|gb|EAP84954.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp. EE-36]
          Length = 439

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 21/125 (16%)

Query: 75  EDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFC----FRREMVGSQKGTVLS 127
            D   ++    LKG       R     L +   C  +C FC     R   V      VL+
Sbjct: 127 TDFPEEDKFEKLKG--RGKATRAPSAFLTVQEGCDKFCAFCVVPYTRGAEVSRPATRVLT 184

Query: 128 SKD--TEAALAYI----QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181
                 E  +  +    Q  +    V   G D        L +++K L  I  ++ +R+ 
Sbjct: 185 EARELVERGVREVTLLGQNVNAYHGVGEEGADY------TLARLIKELAKIDGLERIRYT 238

Query: 182 SRVPI 186
           +  P 
Sbjct: 239 TSHPN 243


>gi|269929146|ref|YP_003321467.1| ATPase, P-type (transporting), HAD superfamily, subfamily IC
           [Sphaerobacter thermophilus DSM 20745]
 gi|269788503|gb|ACZ40645.1| ATPase, P-type (transporting), HAD superfamily, subfamily IC
           [Sphaerobacter thermophilus DSM 20745]
          Length = 816

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 55/184 (29%), Gaps = 39/184 (21%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-------YIQEKSQIWEV 147
           +R +  +   CP       R   V  +     S K +  A         Y+    ++ + 
Sbjct: 348 NRTIAAIAAACPG------RERKVVGEIPFSSSRKWSALAFDDAEGRGFYVLGAPEMIQP 401

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-LIQCLKEAGKP 206
                D L     R+    +               RV +    R NP  L     E   P
Sbjct: 402 ALRSADGLQ---PRVDAWTER------------GLRVLLFA-YRPNPAPLPDGQSEPSLP 445

Query: 207 VYI--AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL-MRTFVE 263
             +          E   EA   I R   AGI L     ++ G  D+P+ +A L  +    
Sbjct: 446 AGLIPMGLIALRDELRPEARETIERFREAGITLK----IISG--DNPDTVAALARQAGFP 499

Query: 264 LRIK 267
             I+
Sbjct: 500 AGIR 503


>gi|254473488|ref|ZP_05086885.1| molybdenum cofactor biosynthesis protein A [Pseudovibrio sp. JE062]
 gi|211957604|gb|EEA92807.1| molybdenum cofactor biosynthesis protein A [Pseudovibrio sp. JE062]
          Length = 344

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + +   C + C +C    M    K  VLS ++ +       E   + ++  TGG+PL+
Sbjct: 29  VSVTDRCDLRCVYCMSEHMTFLPKKDVLSLEELDRLCTVFIE-KGVRKIRLTGGEPLV 85


>gi|330813325|ref|YP_004357564.1| tRNA-i(6)A37 methylthiotransferase [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486420|gb|AEA80825.1| tRNA-i(6)A37 methylthiotransferase [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 437

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 13/107 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD--P 154
           + +   C  +C+FC     V         S+  +     +Q    +   E+I  G +   
Sbjct: 153 ITIQEGCDKFCKFC-----VVPYTRGPEFSRCPDQIYNEVQGLVDAGTREIILLGQNVSG 207

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
                  L +++  +  IK ++ +RF +  P       + +LI   K
Sbjct: 208 YKNKDINLSRLIDKVASIKKLERIRFTTSHPND----FDEDLINAFK 250


>gi|315224540|ref|ZP_07866367.1| carbamoyl-phosphate synthase, small subunit [Capnocytophaga
           ochracea F0287]
 gi|314945561|gb|EFS97583.1| carbamoyl-phosphate synthase, small subunit [Capnocytophaga
           ochracea F0287]
          Length = 366

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 7/61 (11%)

Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
           DT A ++YI++   +  VI T  D        L  +   L  I +++ L   S+V + +P
Sbjct: 118 DTRALVSYIRDNGSMNAVISTETD-------DLALLKTRLNEIPNMKGLELASKVSVTEP 170

Query: 190 Q 190
            
Sbjct: 171 Y 171


>gi|291534395|emb|CBL07507.1| DNA repair photolyase [Roseburia intestinalis M50/1]
          Length = 288

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 36/194 (18%)

Query: 99  LKLLHVCPVYCRFCFRR-------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           + +   C   C +C  R             +    + +  E AL   ++      +I TG
Sbjct: 16  INIYRGCSHGCIYCDSRSRCYGFTHAFEDIEVKENAPELLEKALRSKRQ----KCMIGTG 71

Query: 152 G--DPLILSHKRLQKVLKT--LRYIKHVQI-LRFHSRVPIVDPQRI--NPELIQCLKEAG 204
              DP +   +RL  +L    L  I   +  +   ++       RI  + +L+  + E  
Sbjct: 72  AMCDPYLHVEERL--LLTRRCLELIDRYEFGVAVQTKS-----ARILRDFDLLTSINEKA 124

Query: 205 KPVYIAIHANHPYEF----------SEEAIAAISRLANAGII-LLSQSVLLKGINDDPEI 253
           K +       +  +           ++E I  + +   AGI  ++  + +L  IND  + 
Sbjct: 125 KAIVQITLTTYDEDLCKKIEPDVSTTKERIDVLMKCKEAGIPTVVWLTPILPFINDTADN 184

Query: 254 LANLMRTFVELRIK 267
           + NL+   V+  +K
Sbjct: 185 IKNLLDACVDAGVK 198


>gi|317131836|ref|YP_004091150.1| molybdenum cofactor biosynthesis protein A [Ethanoligenens
           harbinense YUAN-3]
 gi|315469815|gb|ADU26419.1| molybdenum cofactor biosynthesis protein A [Ethanoligenens
           harbinense YUAN-3]
          Length = 324

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 28/186 (15%)

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIW 145
           + +  R  D + + +   C + CR+C   + +        L  ++    +A    ++ I 
Sbjct: 2   ENMEKRVVDYLRVSITDRCNLRCRYCMPDKGISLVPHSETLRYEELLRVVA-CAARAGIQ 60

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           ++  TGG+PL+     L   L+ LR IK ++ +   +   +  PQ   P+L Q   EA  
Sbjct: 61  KIKVTGGEPLV-RRGVLG-FLEKLRGIKGIRQVTMTTNGIL-LPQ-FLPQLAQIGVEA-V 115

Query: 206 PVYIAIHANHPYEFSEEAIAAISR---LANA----------GIILLSQSVLLKGIN-DDP 251
            V +          + E   AI+R   LA+           G+ +   +V + G+N D+ 
Sbjct: 116 NVSLDT-------LNPETFRAITRRDGLADVLRGIDAALTLGLRIKINAVPIAGLNEDEL 168

Query: 252 EILANL 257
             LA L
Sbjct: 169 PALAEL 174


>gi|260888225|ref|ZP_05899488.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Selenomonas sputigena
           ATCC 35185]
 gi|260862059|gb|EEX76559.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Selenomonas sputigena
           ATCC 35185]
          Length = 412

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 17/120 (14%)

Query: 72  EEREDPIG--DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129
           +   D +   +    PL G   R   R  LK+   C  +C FC      G  +  +L S 
Sbjct: 100 DGTGDIMHASEFEDIPLFGAPAR--TRAFLKIEEGCENFCSFCIIPYARGPVRSRLLKSV 157

Query: 130 DTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
             EAA   +       E++ T       G D   L    L   ++ +  +  ++ LR  S
Sbjct: 158 RREAA-KLLAM--GFKEIVLTGIHLGCYGRD---LGDVTLADAVRAVLSLPGLKRLRLGS 211


>gi|256819120|ref|YP_003140399.1| carbamoyl phosphate synthase small subunit [Capnocytophaga ochracea
           DSM 7271]
 gi|256580703|gb|ACU91838.1| carbamoyl-phosphate synthase, small subunit [Capnocytophaga
           ochracea DSM 7271]
          Length = 366

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 7/61 (11%)

Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189
           DT A ++YI++   +  VI T  D        L  +   L  I +++ L   S+V + +P
Sbjct: 118 DTRALVSYIRDNGSMNAVISTETD-------DLALLKARLNEIPNMKGLELASKVSVTEP 170

Query: 190 Q 190
            
Sbjct: 171 Y 171


>gi|114321504|ref|YP_743187.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola
           ehrlichii MLHE-1]
 gi|114227898|gb|ABI57697.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola
           ehrlichii MLHE-1]
          Length = 466

 Score = 37.0 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 16/152 (10%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS-KDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           L   +  C   C FC   + VG ++  +       +  L +I E + + +    GG P  
Sbjct: 65  LYAHVPFCNYACSFCCYAKKVGVEREQMARYVATLKRELEWIPEGTPVNQFFIGGGTPTA 124

Query: 157 LSHKRLQKVLKTLR-YIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
           L    L ++L  +   +  H   +  H+      P+ I+   +  L+  G         +
Sbjct: 125 LPADLLDELLGAIAGRMPYHGDPV--HT--VEASPESISDAHLAVLQRHGVRRVSMGVQS 180

Query: 215 HPYEFSEEAIAA---------ISRLANAGIIL 237
              E  +    +           R+ +AG+IL
Sbjct: 181 LDDEVLDSVRRSHGPDLALETCRRIIDAGLIL 212


>gi|302337649|ref|YP_003802855.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293]
 gi|301634834|gb|ADK80261.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293]
          Length = 424

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----VIFT 150
           R +   +  C   C FC               +K     + +      I +     + F 
Sbjct: 49  RCIYIHIPYCDTICEFCNLNRTARGHTDLDAYTKYLIKEIEWYARYPYIRDGQFDAIYFG 108

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHV 175
           GG P IL  ++L  VL+ LR   H+
Sbjct: 109 GGTPTILQTEQLSLVLRALRDSFHL 133


>gi|198282884|ref|YP_002219205.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Acidithiobacillus ferrooxidans ATCC 53993]
 gi|218665819|ref|YP_002425085.1| tRNA-i(6)A37 modification enzyme MiaB [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|229890414|sp|B7J5B2|MIAB_ACIF2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|229890415|sp|B5ENG4|MIAB_ACIF5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|198247405|gb|ACH82998.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218518032|gb|ACK78618.1| tRNA-i(6)A37 modification enzyme MiaB [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 451

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 14/111 (12%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154
              + +   C  +C FC      G +     S  D    +  + E+  + E+   G +  
Sbjct: 148 TAFVTIQEGCDKFCTFCVVPHTRGRE--YSRSMPDILREVRALVEQ-GVREITLLGQNVN 204

Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
                  ++    L  +L+ L  I  +  LR+ +  P       + ELI  
Sbjct: 205 AYRGATGLVGEGGLADLLERLARIPGLLRLRYTTSHPANL----DDELIAA 251


>gi|197287367|ref|YP_002153239.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
 gi|194684854|emb|CAR46981.1| radical SAM superfamily protein [Proteus mirabilis HI4320]
          Length = 369

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 15/105 (14%)

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           ++S ++ I+ R  +   L +   C   C+FC               S   + AL  I   
Sbjct: 77  SNSRIRVILSRKANHNTLLVTERCNNLCQFC------SQPPKNRDDSWLLDDALLAIAAF 130

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +    +  +GG+PL+  +K +  + +         I R   R  +
Sbjct: 131 NFDGVIGISGGEPLLYGNKFIDFIRE---------IKRLAPRTVL 166


>gi|127514323|ref|YP_001095520.1| radical SAM domain-containing protein [Shewanella loihica PV-4]
 gi|126639618|gb|ABO25261.1| Radical SAM domain protein [Shewanella loihica PV-4]
          Length = 292

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 33/166 (19%)

Query: 97  ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIFTG 151
           ++L++ + C    C FC   +M  + +    + K  +     IQ        I  V    
Sbjct: 18  LILQVTNGCSWNRCHFC---DMYTAPQKQFRAQK-IDKIAEDIQRVAQRNLSISRVFLAD 73

Query: 152 GDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKP 206
           GD + L   RL+ +   +R  +  V      +R+     P+ +       +  L+E G  
Sbjct: 74  GDAMSLPFNRLEAICLLIREHLPQV------TRISSYCLPRNLNNKTDAQLARLRELGLS 127

Query: 207 VYIAIHANHPYEFSEEAIA---------AISRLANAG----IILLS 239
           +      +   E                A+ R+  AG    +++L+
Sbjct: 128 LLYVGCESGDDEVLARIEKGETFDSSLLALQRIRAAGMKSSVMILN 173


>gi|294673365|ref|YP_003573981.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella
           ruminicola 23]
 gi|294473953|gb|ADE83342.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella ruminicola 23]
          Length = 375

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/161 (16%), Positives = 53/161 (32%), Gaps = 31/161 (19%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----------QIWEV 147
           L   +  C   C +C       S  G  L  +  +A    I+ +S           +  +
Sbjct: 4   LYVHIPFCSSRCVYCG----FYSTTGLALRERYVDALCQEIKMRSLPTNPPQKEGSLGTI 59

Query: 148 IFTGGDPLILSHKRLQKVLKTLR---YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
              GG P  L+  +L+++   +     +++   +        V+P  + PEL   L++  
Sbjct: 60  YLGGGTPSQLTIPQLRRIFDAIYIYNKVENDAEVTIE-----VNPDDVTPELAAALQQLP 114

Query: 205 KPVYIA---------IHANHPYEFSEEAIAAISRLANAGII 236
                          +H       S +   A++ L  AG  
Sbjct: 115 INRVSMGAQTFNDERLHFLRRRHSSAQVHQAVATLRQAGFQ 155


>gi|282165127|ref|YP_003357512.1| FO synthase subunit 2 [Methanocella paludicola SANAE]
 gi|282157441|dbj|BAI62529.1| FO synthase subunit 2 [Methanocella paludicola SANAE]
          Length = 355

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 10/81 (12%)

Query: 102 LHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
             +C   CRFC FR           L  K    A AY        EV   GG   +LS  
Sbjct: 57  TDICIGTCRFCAFRNRENYRLTDEQLLKK-VGEAKAY-----GATEVCIQGG---LLSDM 107

Query: 161 RLQKVLKTLRYIKHVQILRFH 181
            L+  +  L+ IK    +  H
Sbjct: 108 YLKDYVAMLKSIKGKYDIDIH 128


>gi|259090313|pdb|3IIZ|A Chain A, X-Ray Structure Of The Fefe-Hydrogenase Maturase Hyde From
           T. Maritima In Complex With S-Adenosyl-L-Methionine
          Length = 348

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/89 (15%), Positives = 35/89 (39%), Gaps = 6/89 (6%)

Query: 89  IVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           I  +Y       R +++  +VC   C +C  R    + K   ++ ++         +   
Sbjct: 42  IRRKYVGDEVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGA 101

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
              V+ +G DP  +    +  ++K ++ +
Sbjct: 102 KTIVLQSGEDPYXMPD-VISDIVKEIKKM 129


>gi|238753337|ref|ZP_04614700.1| Molybdenum cofactor biosynthesis protein A [Yersinia ruckeri ATCC
           29473]
 gi|238708290|gb|EEQ00645.1| Molybdenum cofactor biosynthesis protein A [Yersinia ruckeri ATCC
           29473]
          Length = 327

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 27/163 (16%), Positives = 59/163 (36%), Gaps = 21/163 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +  VC   C +C       +   + L+  +               ++  TGG+P +  
Sbjct: 18  LSITDVCNFRCTYCLPDGYQPNGVKSFLTLDEIRRVGRAFAALGT-EKIRLTGGEPSMRR 76

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216
                 ++  LR    ++ L         +  R++ +++Q  ++AG    + I  +   P
Sbjct: 77  D--FPDIIAALRENPAIRTL-----AVTTNGYRLSRDVVQW-RDAGLT-ALNISVDSLDP 127

Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250
            +F          + +  I     AG   +   +VL++ +ND 
Sbjct: 128 RQFHAITGQDKFHQVMQGIDAAFEAGFEKIKINAVLMREVNDR 170


>gi|115372357|ref|ZP_01459666.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
 gi|115370570|gb|EAU69496.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1]
          Length = 469

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 29/150 (19%)

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ IP  + ++     RE+ +              Y     LK+   C   C FC    +
Sbjct: 124 RQVIPDPDYIHNAETPRENSMPS------------Y--TAYLKVSEGCDNACAFCIIPTL 169

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL------SHKRLQKVLKTLRY 171
            G Q+   ++  D  A    +     + E+     D L           +L  +LK L  
Sbjct: 170 RGGQRSRPIA--DIIAEATRL-ADQGVQELNLVAQD-LTAYGHDLPGKPKLHDLLKELVK 225

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLK 201
           +  V+ +R H   P + P     ELI+ + 
Sbjct: 226 VD-VRWIRLHYAYPRIFP----DELIEVMA 250


>gi|189500325|ref|YP_001959795.1| Radical SAM domain-containing protein [Chlorobium phaeobacteroides
           BS1]
 gi|189495766|gb|ACE04314.1| Radical SAM domain protein [Chlorobium phaeobacteroides BS1]
          Length = 417

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 3/64 (4%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           D  +L L   C + C  C      G +  T L        +  +    ++  V FTGG+P
Sbjct: 60  DTAILCLTEQCNLNCIHCSVNASPGGK--THLDPGVLRRCIEELCS-LEVRVVKFTGGEP 116

Query: 155 LILS 158
           L   
Sbjct: 117 LTYP 120


>gi|310819551|ref|YP_003951909.1| MiaB-like tRNA modifying enzyme YliG [Stigmatella aurantiaca
           DW4/3-1]
 gi|309392623|gb|ADO70082.1| MiaB-like tRNA modifying enzyme YliG [Stigmatella aurantiaca
           DW4/3-1]
          Length = 459

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 29/150 (19%)

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           RQ IP  + ++     RE+ +              Y     LK+   C   C FC    +
Sbjct: 114 RQVIPDPDYIHNAETPRENSMPS------------Y--TAYLKVSEGCDNACAFCIIPTL 159

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL------SHKRLQKVLKTLRY 171
            G Q+   ++  D  A    +     + E+     D L           +L  +LK L  
Sbjct: 160 RGGQRSRPIA--DIIAEATRL-ADQGVQELNLVAQD-LTAYGHDLPGKPKLHDLLKELVK 215

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLK 201
           +  V+ +R H   P + P     ELI+ + 
Sbjct: 216 VD-VRWIRLHYAYPRIFP----DELIEVMA 240


>gi|218264310|ref|ZP_03478167.1| hypothetical protein PRABACTJOHN_03858 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222111|gb|EEC94761.1| hypothetical protein PRABACTJOHN_03858 [Parabacteroides johnsonii
           DSM 18315]
          Length = 440

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 11/123 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  +C +C      G  +   ++S  K  E   A     S   E++ TG
Sbjct: 149 RTRHFLKVQDGCDYFCSYCTIPFARGRSRNGTIASMVKQAEEVAA-----SGGKEIVLTG 203

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            +         +  +  +R +  V+ I+R+  R+  ++P  I  E I       K     
Sbjct: 204 VNIGDFGKSTGETFIDLIRALDEVEGIVRY--RISSIEPNLITDEAID-FVAHSKHFAPH 260

Query: 211 IHA 213
            H 
Sbjct: 261 FHI 263


>gi|220917205|ref|YP_002492509.1| lipoic acid synthetase [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219955059|gb|ACL65443.1| lipoic acid synthetase [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 326

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 63/185 (34%), Gaps = 30/185 (16%)

Query: 98  LLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           ++ +  VC   CRFC  +       +   +   L+    E AL YI   S   + +  GG
Sbjct: 86  VMLMGDVCTRGCRFCNVKTAAHPPALDPDEPRHLAEAIAELALDYIVVTSVDRDDLPDGG 145

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAI 211
                        ++ L+ I           V ++ P  R +PE ++ +  A   V+   
Sbjct: 146 ------AAHFADAIRRLKEIP-------GLLVEVLTPDFRGDPEAVRTVGRAAPDVFANN 192

Query: 212 HANHPYEFSEEAIAA----------ISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
                   +     A          +++L      ++++S ++ G+ +    +   MR  
Sbjct: 193 -LETVRRLTPAVRDAKATYDQTLGVLAQLKREFPQVVTKSSIMVGLGEQEAEVVEAMRDL 251

Query: 262 VELRI 266
               +
Sbjct: 252 RAHGV 256


>gi|148270626|ref|YP_001245086.1| biotin synthase [Thermotoga petrophila RKU-1]
 gi|147736170|gb|ABQ47510.1| biotin synthase [Thermotoga petrophila RKU-1]
          Length = 348

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 11/77 (14%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R +++  +VC   C +C  R    + K   ++ ++         +      V+ +G DP 
Sbjct: 54  RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY 113

Query: 156 ILSHKRLQKVLKTLRYI 172
            + +  +  +++ ++ +
Sbjct: 114 YMPN-VISDIVREIKKM 129


>gi|110834795|ref|YP_693654.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alcanivorax
           borkumensis SK2]
 gi|123345402|sp|Q0VN66|MIAB_ALCBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|110647906|emb|CAL17382.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
          Length = 445

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 23/126 (18%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF----- 149
             + ++  C  YC FC     V         S+  +  L  IQ      + EV       
Sbjct: 149 AFVSIMEGCSKYCTFC-----VVPYTRGEEVSRPVQPVLKEIQHLADMGVREVNLLGQNV 203

Query: 150 -----TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLK 201
                 G D   L    L  +++ +R I  +  +R+ +  P+   +   ++  ++ + + 
Sbjct: 204 NAYQGVGADGDTLD---LADLIRLIRDIDGIDRIRYTTSHPVEFSEALIQVYEDVPELVS 260

Query: 202 EAGKPV 207
               PV
Sbjct: 261 HLHLPV 266


>gi|86742173|ref|YP_482573.1| molybdenum cofactor biosynthesis protein A [Frankia sp. CcI3]
 gi|86569035|gb|ABD12844.1| GTP cyclohydrolase subunit MoaA [Frankia sp. CcI3]
          Length = 328

 Score = 37.0 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 49/245 (20%), Positives = 90/245 (36%), Gaps = 39/245 (15%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C   E +       +L+  +    +     +  + EV  TGG+P++ 
Sbjct: 16  VSLTDRCNLRCTYCMPAEGLAWLPGERMLTDDEVVRLVGVAVGRLGVTEVRLTGGEPML- 74

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216
               L +++  L        LR    + +     I   L   L+ AG   + +++     
Sbjct: 75  -RPGLVELVARLAA------LRPRPELSVTTNGLILARLAGPLRAAGLDRINVSLDTLDA 127

Query: 217 YEFSEEAIAAISRLANA-----------GIILLSQSVLLKGINDD--PEILANLMRTFVE 263
             F         RL +               +   SVL++G+NDD  P +L   +R   E
Sbjct: 128 DRFVRITRR--ERLGDVLAGLSAAAASGFTPVKVNSVLVRGVNDDEAPRLLRWCLREGYE 185

Query: 264 LRIKPYYLHHPDLAAGTSH--FRLTIEEGQKIVASLKEK-----ISGL-CQPFYILDLPG 315
           LR          +     H   R T+    +I+A L+ +     + G    P  + ++ G
Sbjct: 186 LR------FIEQMPLDAQHAWRRDTMVTAGEILACLRAEFTLTPLPGRGSAPAELFEVNG 239

Query: 316 GYGKV 320
           G G+V
Sbjct: 240 GPGRV 244


>gi|327309983|ref|YP_004336880.1| Radical SAM domain-containing protein [Thermoproteus uzoniensis
           768-20]
 gi|326946462|gb|AEA11568.1| Radical SAM domain protein [Thermoproteus uzoniensis 768-20]
          Length = 291

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 24/172 (13%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLIL 157
           L     C   C +C+    +             E     +++      +  +   DP   
Sbjct: 23  LNPYTGCGHSCAYCYISGYIPRAFQPRPKEDLLERVRRDVKKLPPGSVISLSNSSDPYTP 82

Query: 158 SHKRLQ---KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
               L+   + L  +    H ++L   ++ P+V         +  L +      + I   
Sbjct: 83  PEAELRLTRRALSLILEAGH-KVL-IVTKSPLVL------RDLDILSKYPGRAVVQITVT 134

Query: 215 HPYE-----FSEEA------IAAISRLANAGIILLSQS-VLLKGINDDPEIL 254
              E         A      + A  R+A AGI +  +   ++  +ND PE L
Sbjct: 135 TLDERIAERLEPRAPRPSARLEAARRIAEAGIPVGVRLDPIVPYVNDSPESL 186


>gi|325967847|ref|YP_004244039.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
 gi|323707050|gb|ADY00537.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
          Length = 385

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 3/92 (3%)

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
            +++ L  +   + + + + L H C + CR C+   + G      LS  D    L  ++ 
Sbjct: 28  EDNNELPYLSMNFINDVTIYLTHACNLECRHCYL--LAGKPLSNELSIDDWLLILDKLR- 84

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
                 V   GG+P++L  + L K++   + +
Sbjct: 85  DLGAKYVYLLGGEPMLLIRRGLLKIISHAKDL 116


>gi|164687526|ref|ZP_02211554.1| hypothetical protein CLOBAR_01167 [Clostridium bartlettii DSM
           16795]
 gi|164603300|gb|EDQ96765.1| hypothetical protein CLOBAR_01167 [Clostridium bartlettii DSM
           16795]
          Length = 449

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF  +        +++ +  +AA+ Y+   S      E+ F GG+PL
Sbjct: 90  LHVSHDCNLRCKYCFASQGDFGGAKEIMNFEVGKAAIDYLIANSGNRRNLEIDFFGGEPL 149

Query: 156 I 156
           +
Sbjct: 150 M 150


>gi|15451307|dbj|BAB64457.1| hypothetical protein [Macaca fascicularis]
          Length = 877

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 22/191 (11%)

Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173
           +  V       +  +     + Y+    +  E + +         K+L  +LK L     
Sbjct: 478 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 531

Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233
            ++ L    + P   P+         L+  G    ++IH  H   F  E    +S L + 
Sbjct: 532 DLESL---LQAPGGKPRGFGEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSILEDT 584

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288
           G  L S+  +L  I D  E    L R   + +I   YL           G   F++  ++
Sbjct: 585 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 641

Query: 289 EGQKIVASLKE 299
               I+ ++K 
Sbjct: 642 RSLGIMQTVKG 652


>gi|16082543|ref|NP_394103.1| coenzyme PQQ synthesis protein E [Thermoplasma acidophilum DSM
           1728]
          Length = 368

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 28/187 (14%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----VI 148
            P  I  +    C + C  C    ++      +      + ++ ++    +  +    VI
Sbjct: 8   KPLLIFWETTKACGLKCEHCRASAIL----DALPGEMTFDQSINFLSHIKEFGKPYPIVI 63

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            TGGD  +L   R+  ++  LR     Q + F S  P V    +  E I   KE G    
Sbjct: 64  LTGGD--MLRKHRIWDIMDYLRS----QEIPF-SVSPAVT-DLLTHEAILKFKEFGVS-S 114

Query: 209 IAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLK-GINDDPEILANL 257
           ++I  +   E  E+             AI  L + GI +   +V+++  ++D P +L  +
Sbjct: 115 VSISLDGMREVHEKVRGVAGVYDDTVKAIEDLISTGISMQINTVVMRSTVHDLPHVLKLI 174

Query: 258 MRTFVEL 264
           +   V++
Sbjct: 175 IDKGVKV 181


>gi|62184869|ref|YP_219654.1| hypothetical protein CAB227 [Chlamydophila abortus S26/3]
 gi|62147936|emb|CAH63683.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
          Length = 370

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 19/93 (20%), Positives = 25/93 (26%), Gaps = 11/93 (11%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y     L   + C   C FC      G  KG   +       +  +     I E    GG
Sbjct: 66  YSSTFYLYPTNFCEFNCTFCAFYAKPGDPKGWFHTPDQLIEKIQEL--DVPITETHIVGG 123

Query: 153 DPLILSHKRLQKVLKTLRYIK------HVQILR 179
                    L    +    IK      HV+ L 
Sbjct: 124 ---CFPDCDLDYYTELFSKIKAHFPHLHVKALT 153


>gi|228912462|ref|ZP_04076141.1| Radical SAM domain protein [Bacillus thuringiensis IBL 200]
 gi|228847177|gb|EEM92152.1| Radical SAM domain protein [Bacillus thuringiensis IBL 200]
          Length = 468

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 7/114 (6%)

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH-RYPDRILLKLLHVCPVYCRFCFRRE 116
           R+ I   EEL    +   D   D     +  I    Y   + L + H C + C +CF  +
Sbjct: 63  RETIADIEELKRDGKLFTD--DDYKDLSIDLINRPTYVKALCLNVAHTCNLSCEYCFASQ 120

Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLK 167
              +    ++S +  + A+ ++ E S      +V F GG+PL+   K +++++ 
Sbjct: 121 GKYNGNRAIMSYEVGKRAIDFLLENSGNHRNLDVDFFGGEPLMA-WKTVKQIVA 173


>gi|167630037|ref|YP_001680536.1| elongator protein 3/miab/nifb, putative [Heliobacterium
           modesticaldum Ice1]
 gi|167592777|gb|ABZ84525.1| elongator protein 3/miab/nifb, putative [Heliobacterium
           modesticaldum Ice1]
          Length = 393

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/117 (12%), Positives = 38/117 (32%), Gaps = 21/117 (17%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y   +   +   C ++C  C+         G + + +              +  ++ +GG
Sbjct: 35  YGPVVAWNVSRTCNLHCIHCYSDSDEIEYPGELTTKEAIRFIDD--LADFNVPVLLLSGG 92

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRF-----HSRVPIVDPQRINPELIQCLKEAG 204
           +PL+         +  L      + +R       +         I P++ + +K+ G
Sbjct: 93  EPLMRPD------IFDLVAHATKRNIRVTFSTNGT--------LITPDVAKEIKKYG 135


>gi|148241697|ref|YP_001226854.1| oxygen independent coproporphyrinogen III oxidase [Synechococcus
           sp. RCC307]
 gi|147850007|emb|CAK27501.1| Oxygen independent coproporphyrinogen III oxidase [Synechococcus
           sp. RCC307]
          Length = 410

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 13/90 (14%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ----------EK 141
           R P R L   +  C   C +C   +      G       +++   Y+             
Sbjct: 7   RRPPRSLYLHIPFCHRRCFYC---DFPVVPLGDQADGSRSQSIADYLHWLLRDLAAAPAG 63

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
             +  V   GG P +LS  +L ++L  +R 
Sbjct: 64  PPLSTVYIGGGTPSMLSPDQLAQLLAAVRS 93


>gi|146282425|ref|YP_001172578.1| pyrroloquinoline quinone biosynthesis protein PqqE [Pseudomonas
           stutzeri A1501]
 gi|145570630|gb|ABP79736.1| coenzyme PQQ synthesis protein E [Pseudomonas stutzeri A1501]
          Length = 381

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 3/76 (3%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +LL+L + CP+ C FC         +   LS+ +    +A  +    + ++ F+GG+P +
Sbjct: 19  LLLELTYQCPLQCVFCSNPRNFADYRPDELSTAEWIDVMAQARAMGAV-QIGFSGGEPTL 77

Query: 157 LSHKRLQKVLKTLRYI 172
                L+ ++     +
Sbjct: 78  RKD--LETLVAEADRM 91


>gi|325264391|ref|ZP_08131122.1| putative pyruvate formate-lyase activating enzyme [Clostridium sp.
           D5]
 gi|324030462|gb|EGB91746.1| putative pyruvate formate-lyase activating enzyme [Clostridium sp.
           D5]
          Length = 304

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 8/36 (22%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269
           GI +   + L+ G+ND  + + +++    +  I+ Y
Sbjct: 216 GIFVR--TPLVPGVNDSEQDILDMIEALQKNGIRNY 249


>gi|178847575|pdb|3CIW|A Chain A, X-Ray Structure Of The [fefe]-Hydrogenase Maturase Hyde
           From Thermotoga Maritima
 gi|259090312|pdb|3IIX|A Chain A, X-Ray Structure Of The Fefe-Hydrogenase Maturase Hyde From
           T. Maritima In Complex With Methionine And
           5'deoxyadenosine
          Length = 348

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R +++  +VC   C +C  R    + K   ++ ++         +      V+ +G DP 
Sbjct: 54  RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY 113

Query: 156 ILSHKRLQKVLKTLRYI 172
            +    +  ++K ++ +
Sbjct: 114 XMPD-VISDIVKEIKKM 129


>gi|138894071|ref|YP_001124524.1| thioredoxin-like oxidoreductase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196250260|ref|ZP_03148953.1| YfkB-like domain protein [Geobacillus sp. G11MC16]
 gi|134265584|gb|ABO65779.1| Thioredoxin-like oxidoreductase [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210149|gb|EDY04915.1| YfkB-like domain protein [Geobacillus sp. G11MC16]
          Length = 374

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L    +C + C  C     + ++    L     +  +  ++E   +  +  TGG+P +LS
Sbjct: 35  LTTTTLCNMRCEHCAVGYTLATKDPDALP---LDLLIRRLEEIPHLRSLSITGGEP-MLS 90

Query: 159 HKRLQKVLKTLRYIKHVQILR 179
              +++ +  L    H + +R
Sbjct: 91  LTSVERYVVPLLRYAHERGVR 111


>gi|124485405|ref|YP_001030021.1| hypothetical protein Mlab_0580 [Methanocorpusculum labreanum Z]
 gi|124362946|gb|ABN06754.1| MiaB-like tRNA modifying enzyme [Methanocorpusculum labreanum Z]
          Length = 416

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 17/125 (13%)

Query: 97  ILLKLLHVCPVYCRFC-FRREM-----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-F 149
            +L++   C  +C +C  R          ++     +    EA    IQ  +Q       
Sbjct: 127 AVLQIARGCNGHCTYCITRLARGKLVSFSAEDIVRQAKSIVEAGATEIQLTAQDTSSWGL 186

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP-IVDPQRINPELIQCLKEAGKPVY 208
              D L L       +L+ L  I    ++R     P  + P  I  + +  LK+    ++
Sbjct: 187 DRNDGLRLPD-----LLRQLCAIPGNFMIRIGMANPDTLLP--ILDDFLDALKDP--KIF 237

Query: 209 IAIHA 213
           + +H 
Sbjct: 238 LFLHI 242


>gi|121607765|ref|YP_995572.1| molybdenum cofactor biosynthesis protein A [Verminephrobacter
           eiseniae EF01-2]
 gi|121552405|gb|ABM56554.1| GTP cyclohydrolase subunit MoaA [Verminephrobacter eiseniae EF01-2]
          Length = 384

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C     F +       G +L  ++             + ++  TGG+
Sbjct: 44  ISVTDRCNFRCNYCMPKEVFDKNYPYLPHGALLRFEEIARLARLFLAH-GVRKIRLTGGE 102

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K L  ++  L  +
Sbjct: 103 PLL--RKNLPALVAQLAAL 119


>gi|78043460|ref|YP_359414.1| radical SAM domain-containing protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77995575|gb|ABB14474.1| radical SAM domain protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 452

 Score = 37.0 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK----SQIWEVIF 149
           P +I     + C + C +CF++ +    K  + + +  +A   Y+ +      +   +  
Sbjct: 88  PTQIFFVPTYNCNLACSYCFQQGI--KDKKDLPTKEVLDAFFNYVNQNFKNEPEKPFLTL 145

Query: 150 TGGDPLILS 158
            GG+PLI S
Sbjct: 146 FGGEPLIAS 154


>gi|303247563|ref|ZP_07333834.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
 gi|302491043|gb|EFL50937.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ]
          Length = 364

 Score = 37.0 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 4/84 (4%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           Y   + +   +VC   CRFC   ++ G+     LS  D  A LA  +E + I E+   GG
Sbjct: 61  YVHNVHINFTNVCVNACRFCAFFKVKGAAGARTLSVDDIVAELAA-RENAPIREIHVVGG 119

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQ 176
              +     L   +  LR I  V+
Sbjct: 120 ---LNPDLPLSYYVDMLRAISRVR 140


>gi|262377253|ref|ZP_06070477.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter lwoffii
           SH145]
 gi|262307706|gb|EEY88845.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter lwoffii
           SH145]
          Length = 485

 Score = 37.0 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 55/144 (38%), Gaps = 22/144 (15%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151
           +  + ++  C  YC FC     V         S+  +  LA I    +  + E+   G  
Sbjct: 185 KAFVSIMEGCSKYCSFC-----VVPYTRGEEVSRPLDDVLAEIAGLAEKGVREISLLGQN 239

Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                G+    +      +L+ +  I  +  +R+ +  P+      N +LIQC ++  + 
Sbjct: 240 VNGYRGETFEGNICTFADLLRLVADIPGIGRIRYTTSHPL----EFNDDLIQCYRDLPQ- 294

Query: 207 VYIAIHANHP-YEFSEEAIAAISR 229
             +  H + P    S + + A+ R
Sbjct: 295 --MVSHLHLPVQSGSNDVLQAMKR 316


>gi|229815230|ref|ZP_04445566.1| hypothetical protein COLINT_02276 [Collinsella intestinalis DSM
           13280]
 gi|229809240|gb|EEP45006.1| hypothetical protein COLINT_02276 [Collinsella intestinalis DSM
           13280]
          Length = 427

 Score = 37.0 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 18/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R+ +K+   C   C +C   +  G ++   ++S  +    A     E++ I EV+ TG
Sbjct: 133 RSRLGVKVQDGCNNRCSYCIVWKARGPERSVPVASVLEQVRRA-----ERAGIPEVVLTG 187

Query: 152 G-----DPLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
                 D +  S     + ++L  +    ++  +R  S    ++P  ++  LI  +   G
Sbjct: 188 VNLGAYDGVDASDSHVEIDELLDIILEQTNIPQVRLSS----LEPMDVHDRLIDAMVAGG 243

Query: 205 KPVYIAIH 212
           + V   +H
Sbjct: 244 ERVAPFLH 251


>gi|237716499|ref|ZP_04546980.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262408097|ref|ZP_06084645.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22]
 gi|294645091|ref|ZP_06722817.1| MiaB-like protein [Bacteroides ovatus SD CC 2a]
 gi|294809491|ref|ZP_06768194.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b]
 gi|229444146|gb|EEO49937.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262354905|gb|EEZ03997.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22]
 gi|292639597|gb|EFF57889.1| MiaB-like protein [Bacteroides ovatus SD CC 2a]
 gi|294443309|gb|EFG12073.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b]
          Length = 436

 Score = 37.0 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 14/113 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  +      ++    + Y+  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G D      + L ++++ +  I  V+ +R H       P     +L + ++E 
Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRER 242


>gi|206969427|ref|ZP_03230381.1| RNA modification enzyme, MiaB family [Bacillus cereus AH1134]
 gi|229180587|ref|ZP_04307929.1| hypothetical protein bcere0005_39320 [Bacillus cereus 172560W]
 gi|229192521|ref|ZP_04319483.1| hypothetical protein bcere0002_41730 [Bacillus cereus ATCC 10876]
 gi|206735115|gb|EDZ52283.1| RNA modification enzyme, MiaB family [Bacillus cereus AH1134]
 gi|228590945|gb|EEK48802.1| hypothetical protein bcere0002_41730 [Bacillus cereus ATCC 10876]
 gi|228603011|gb|EEK60490.1| hypothetical protein bcere0005_39320 [Bacillus cereus 172560W]
          Length = 450

 Score = 37.0 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 19/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C FC      G  + +    +  + A   +       E++ T   
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDGKEVIKQAQQLVDA--GYKEIVLTGIH 198

Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D   +    L  +L+ +   +  ++ LR  S    ++  +I+ E+I+ L ++  
Sbjct: 199 TGGYGED---IKDYNLAGLLRDMEAEVDGLKRLRISS----IEASQISDEVIEVLDKSEV 251

Query: 206 PVYIAIHA 213
            V   +H 
Sbjct: 252 -VVRHLHI 258


>gi|54027758|ref|YP_121999.1| hypothetical protein pnf11100 [Nocardia farcinica IFM 10152]
 gi|54019266|dbj|BAD60635.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 377

 Score = 37.0 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 10/98 (10%)

Query: 99  LKLLHVCPVYCRFCFRREM---VGSQKGTVLSSKDTEAAL-AYIQEKSQIWEVIFTGGDP 154
           L++   C   C  C R            T ++     A L  ++  + +I ++    GDP
Sbjct: 15  LEVSTRCNAECPMCARNLFGATAPGLTETSMTLDQFRACLPEHVLAQLEIVDICGAYGDP 74

Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF----HSRVPIVD 188
            I     L  +   +  I     +R       R P   
Sbjct: 75  AIAP--ELLDICHHIHTINPSTTIRIYSNGGLRTPTWW 110


>gi|328951573|ref|YP_004368908.1| Ribosomal RNA large subunit methyltransferase N [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451897|gb|AEB12798.1| Ribosomal RNA large subunit methyltransferase N [Marinithermus
           hydrothermalis DSM 14884]
          Length = 353

 Score = 37.0 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 45/197 (22%), Positives = 74/197 (37%), Gaps = 39/197 (19%)

Query: 93  YPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVI 148
           Y DR  + +  +  CP  C FC   +M   +  T     D   A AY Q     +I  V+
Sbjct: 107 YKDRRTICISSMVGCPAGCTFCATGQMRFGRNLTAPEILDQLLAAAYHQGISPREIRNVV 166

Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK------ 201
             G G+PL+     L  VLK +R +        H +   + P+RI    +   +      
Sbjct: 167 LMGMGEPLL----NLTNVLKAVRRM-------IHKQALAMSPRRITLSTVGIPRGIYRLA 215

Query: 202 --EAGKPVYIAIHA---NHPYEFSEEA-IAAISRLANAGIILLSQS--------VLLKGI 247
             + G  + +++HA            A   AI  + +A      ++         LL+G+
Sbjct: 216 EEDVGVKLALSLHAPDDETRRRIIPTAHRYAIEEIMDAVRHYYRRTKRRVTLEYTLLRGV 275

Query: 248 NDD---PEILANLMRTF 261
           ND     ++LA   R  
Sbjct: 276 NDHLWQAKMLAKHTRGL 292


>gi|297617252|ref|YP_003702411.1| radical SAM protein [Syntrophothermus lipocalidus DSM 12680]
 gi|297145089|gb|ADI01846.1| Radical SAM domain protein [Syntrophothermus lipocalidus DSM 12680]
          Length = 293

 Score = 37.0 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 62/168 (36%), Gaps = 36/168 (21%)

Query: 98  LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----QIWEVIFTGG 152
           +L+    C    C FC      G  K      +  E   A I+        + +V    G
Sbjct: 19  ILQCTVGCSHNGCTFC------GMYKDKKYRVRSLEEIKADIRMAKLYYGDLQKVFLADG 72

Query: 153 DPLILSHKRLQKVLKTLR----YIKHVQILRFHSRVPIVDPQRI---NPELIQCLKEAGK 205
           D L +    L ++L  L      + HV I           PQ I     E +Q LK+AG 
Sbjct: 73  DALAMQTDELLEILNYLYRLFPSLYHVGIY--------AGPQSILQKTEEELQMLKQAGL 124

Query: 206 PV-YIAIHANHPY---EFS-----EEAIAAISRLANAGIILLSQSVLL 244
            + Y+ I         E +     EE + A  ++  +GI L S +VLL
Sbjct: 125 TIAYLGIETGDERLLKEINKGVTYEEMVEAGQKIVRSGIKL-SATVLL 171


>gi|300024986|ref|YP_003757597.1| RNA modification enzyme, MiaB family [Hyphomicrobium denitrificans
           ATCC 51888]
 gi|299526807|gb|ADJ25276.1| RNA modification enzyme, MiaB family [Hyphomicrobium denitrificans
           ATCC 51888]
          Length = 449

 Score = 37.0 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 10/96 (10%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-------ALAYIQEKSQIWEVIF 149
             L +   C  +C FC      GS+    ++  + EA       A   +     +     
Sbjct: 157 AFLTIQEGCDKFCTFCVVPYTRGSEYSRSVAKIEAEAHELARAGAKELVLLGQNVNAYHG 216

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
            G D    S   L  +++TL  I+ V+ +R+ +  P
Sbjct: 217 EGADGRTAS---LADLIRTLAAIEGVERIRYMTSHP 249


>gi|206601630|gb|EDZ38113.1| Putative radical SAM family protein [Leptospirillum sp. Group II
           '5-way CG']
          Length = 379

 Score = 37.0 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 50/291 (17%), Positives = 92/291 (31%), Gaps = 60/291 (20%)

Query: 94  PDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIF 149
            DR  L +     C + CRFC R   +G  +   +S        A   + E         
Sbjct: 101 DDRATLCVSSQVGCGIGCRFC-RTAEMGLIRNLSVSEILGQVRVANRLLAESPVRDMSKE 159

Query: 150 TGGDPLILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQ-------RIN------P 194
           T   PL+     L    + + L    H+      S   +  P+       RI        
Sbjct: 160 TEPAPLLSRVNHLVFMGMGEPLANFDHLVR----SLAVLTSPEGFGLSSRRITVSTSGLA 215

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-----------ILLSQS-- 241
             I+ L  +G  V +A+  + P   +EE    +  ++                L ++   
Sbjct: 216 GRIRDLGTSGIAVNLAVSLSAP---TEELRENLMPISRHHPIRSILSACRAYPLRNRQRI 272

Query: 242 ----VLLKGINDDPEILANLMRTF--VELRI-----KPYYLHHPDLAAGTSHFRLTIEEG 290
               VLL G+ND       L R       ++      PY         G+ + R   +  
Sbjct: 273 TFEYVLLGGVNDGEGQARELARLLAPFRSKVNLIPFNPY--------PGSPYHRPDKDRV 324

Query: 291 QKIVASLKEK-ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340
           ++    L  K ++   +     D+ G  G++ +       + + ++   D 
Sbjct: 325 RRFQEILLAKGVTATLRTTRGEDILGACGQLALSPSPALTMESSTWKTIDF 375


>gi|42783437|ref|NP_980684.1| hypothetical protein BCE_4391 [Bacillus cereus ATCC 10987]
 gi|206978420|ref|ZP_03239289.1| RNA modification enzyme, MiaB family [Bacillus cereus H3081.97]
 gi|217961800|ref|YP_002340370.1| RNA modification enzyme, MiaB family [Bacillus cereus AH187]
 gi|222097755|ref|YP_002531812.1| fe-s oxidoreductase [Bacillus cereus Q1]
 gi|229141048|ref|ZP_04269590.1| hypothetical protein bcere0013_41420 [Bacillus cereus BDRD-ST26]
 gi|229198438|ref|ZP_04325142.1| hypothetical protein bcere0001_39660 [Bacillus cereus m1293]
 gi|42739366|gb|AAS43292.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
 gi|206743376|gb|EDZ54814.1| RNA modification enzyme, MiaB family [Bacillus cereus H3081.97]
 gi|217065337|gb|ACJ79587.1| RNA modification enzyme, MiaB family [Bacillus cereus AH187]
 gi|221241813|gb|ACM14523.1| Fe-S oxidoreductase [Bacillus cereus Q1]
 gi|228584941|gb|EEK43055.1| hypothetical protein bcere0001_39660 [Bacillus cereus m1293]
 gi|228642326|gb|EEK98615.1| hypothetical protein bcere0013_41420 [Bacillus cereus BDRD-ST26]
 gi|324328214|gb|ADY23474.1| Fe-S oxidoreductase [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 450

 Score = 37.0 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 19/128 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C FC      G  + +    +  + A   +       E++ T   
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDGKEVIKQAQQLVDA--GYKEIVLTGIH 198

Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
               G D   +    L  +L+ +   +  ++ LR  S    ++  +I+ E+I+ L ++  
Sbjct: 199 TGGYGED---IKDYNLAGLLRDMEAEVDGLKRLRISS----IEASQISDEVIEVLDKSEV 251

Query: 206 PVYIAIHA 213
            V   +H 
Sbjct: 252 -VVRHLHI 258


>gi|18312049|ref|NP_558716.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str.
           IM2]
 gi|18159475|gb|AAL62898.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str.
           IM2]
          Length = 346

 Score = 37.0 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 19/127 (14%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCF---------RREMVGSQKGTVLSSKDTEAALAYI 138
           GIV R  + I ++   +C + C FC          R      +   +LS    E  + Y 
Sbjct: 22  GIVDRGTNVIEVRPTSICALNCIFCSVNAGPLSRVRWAEYVVEPEPLLS--ALEEVVRY- 78

Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           ++   +   I   GDP       L ++++  + IK V ++   +R+       ++ E +Q
Sbjct: 79  KKTDDVEVHIDGMGDPGHYP--HLAQLVRGAKSIKGVALVSMQTRL-----YMLDKEAVQ 131

Query: 199 CLKEAGK 205
            L  AG 
Sbjct: 132 QLANAGL 138


>gi|188588298|ref|YP_001920864.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum E3 str. Alaska
           E43]
 gi|188498579|gb|ACD51715.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S
           oxidoreductase [Clostridium botulinum E3 str. Alaska
           E43]
          Length = 288

 Score = 37.0 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 8/83 (9%)

Query: 95  DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGG 152
           + ++++    C    C FC    M  S+  T+ S ++ +  + Y +     + ++    G
Sbjct: 14  NSLIIQATLGCSHNKCSFC---NMYKSKIFTIKSLEEIKKEIDYFRTIYKYVEKIFLADG 70

Query: 153 DPLILSHKRLQKVLKTLRYIKHV 175
           D LI+    L+ +L+   YIK+V
Sbjct: 71  DALIIPIGDLKSILE---YIKNV 90


>gi|150400543|ref|YP_001324309.1| radical SAM domain-containing protein [Methanococcus aeolicus
           Nankai-3]
 gi|150013246|gb|ABR55697.1| Radical SAM domain protein [Methanococcus aeolicus Nankai-3]
          Length = 290

 Score = 37.0 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 40/78 (51%), Gaps = 10/78 (12%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIF 149
           +Y   ++LK+ + C + C +C+     +        +      ++ YI    +++ ++ F
Sbjct: 4   KY---LILKITNRCNLDCIYCYNMGHKINKNMDFTTAK----NSIDYILNDGTELLKIQF 56

Query: 150 TGGDPLILSHKRLQKVLK 167
           TGG+PL L+ + ++KV+ 
Sbjct: 57  TGGEPL-LNFELIEKVIS 73


>gi|124515329|gb|EAY56839.1| putative radical SAM family protein [Leptospirillum rubarum]
          Length = 379

 Score = 37.0 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 49/291 (16%), Positives = 91/291 (31%), Gaps = 60/291 (20%)

Query: 94  PDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIF 149
            DR  L +     C + CRFC R   +G  +   +S        A   + E         
Sbjct: 101 DDRATLCVSSQVGCGIGCRFC-RTAEMGLVRNLSVSEILGQVRVANRLLAEAPVRDMSKE 159

Query: 150 TGGDPLILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQ-------RIN------P 194
           T   P +     L    + + L    H+      S   +  P+       RI        
Sbjct: 160 TDPTPFLSRVNHLVFMGMGEPLANFDHLVR----SLAVLTSPEGFGLSSRRITVSTSGLA 215

Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-----------ILLSQS-- 241
             I+ L  +G  V +A+  + P   +EE    +  ++                L ++   
Sbjct: 216 GRIRDLGTSGIAVNLAVSLSAP---TEELRENLMPISRHHPIRSILSACRAYPLRNRQRI 272

Query: 242 ----VLLKGINDDPEILANLMRTF--VELRI-----KPYYLHHPDLAAGTSHFRLTIEEG 290
               VLL G+ND       L R       ++      PY         G+ + R   +  
Sbjct: 273 TFEYVLLGGVNDGEGQARELARLLAPFRSKVNLIPFNPY--------PGSPYHRPDKDRV 324

Query: 291 QKIVASLKEK-ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340
           ++    L  K ++   +     D+ G  G++ +       + + ++   D 
Sbjct: 325 RRFQEILLAKGVTATLRTTRGEDILGACGQLALSPSPALTMESSTWKTIDF 375


>gi|219667931|ref|YP_002458366.1| radical SAM protein [Desulfitobacterium hafniense DCB-2]
 gi|219538191|gb|ACL19930.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2]
          Length = 441

 Score = 37.0 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 28/212 (13%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFT 150
           R P  + +++   C + C  CF       +     S +       YI   +     +  T
Sbjct: 94  RQPTLVEIEVTEGCNLRCPVCF-MAANDFRPDPNPSLEALGEKYRYILRHTNPDTSIQLT 152

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG+P   + + L  +++  R I   Q +  ++   ++   R NP+ +Q L EAG    I 
Sbjct: 153 GGEP--TTREDLADIIRLGREIG-FQAIEVNTNGVVI--GR-NPDYLQKLAEAGVS-GIY 205

Query: 211 IHAN----HPYE------FSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILA-NL 257
           +  +      YE           + AI+    AG+ ++    +++GIN+    E+L   L
Sbjct: 206 LQFDGLTGEVYEQIRGENLLPAKLKAIANCREAGVQVVLAMTVIEGINEKQLGEVLKFAL 265

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289
               V + I     +    A G+  F + + +
Sbjct: 266 ANKDVIVGIA----YQ--PAFGSGRFDVPLSK 291


>gi|90426035|ref|YP_534405.1| molybdenum cofactor synthesis-like [Rhodopseudomonas palustris
           BisB18]
 gi|90108049|gb|ABD90086.1| molybdenum cofactor synthesis-like [Rhodopseudomonas palustris
           BisB18]
          Length = 340

 Score = 37.0 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R+ DR+ + +   C   C +C     V + +  +L+  + +   +       +  V  TG
Sbjct: 19  RHIDRLRVSVTDRCNFRCSYCLGAHPVFAPRAELLTLDELDRLCSAFVGC-GVRRVRLTG 77

Query: 152 GDPLILSHKRLQKVLKTLRY 171
           G+PL+   + L   ++ L  
Sbjct: 78  GEPLV--RRNLMSFVRALSR 95


>gi|95929999|ref|ZP_01312739.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
 gi|95133968|gb|EAT15627.1| Radical SAM [Desulfuromonas acetoxidans DSM 684]
          Length = 614

 Score = 37.0 bits (85), Expect = 4.4,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 30/187 (16%)

Query: 48  NPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
           + HN  +P+ R   P      + P          + S + G      + +L ++   CP 
Sbjct: 132 DRHNALEPLYRNSGPIDLLHQVSPW--------LDGSLVPG------EGVLWEVSRGCPF 177

Query: 108 YCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167
            C FCF     G      ++    E  LA   +       +           +R +K+L+
Sbjct: 178 RCSFCFDAR--GDHGVRTMAFSRLEQELALFVKHRVSQVWVLDST--FNYPAERGKKLLR 233

Query: 168 TLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226
            ++ +  H+    FH    I     I+ EL Q L E    V I +        + + +  
Sbjct: 234 LIKRVAPHLH---FHLEAKIEF---IDEELAQLLSEIHCSVQIGL-----QSANPDVVRH 282

Query: 227 ISRLANA 233
           + R  +A
Sbjct: 283 VHRHFDA 289


>gi|257062773|ref|YP_003142445.1| pyruvate formate-lyase activating-like enzyme [Slackia
           heliotrinireducens DSM 20476]
 gi|256790426|gb|ACV21096.1| pyruvate formate-lyase activating-like enzyme [Slackia
           heliotrinireducens DSM 20476]
          Length = 464

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 2/63 (3%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPLIL 157
                 CP  C FCF      +  G +   +D  + LA I +    +  +  TGG+PL+ 
Sbjct: 126 FFYSLRCPKNCFFCF-NHNQNNYAGYLDDDRDWRSELAAIMEAGRPMTHLALTGGEPLMR 184

Query: 158 SHK 160
             +
Sbjct: 185 PDE 187


>gi|317488970|ref|ZP_07947500.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
 gi|316912044|gb|EFV33623.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA]
          Length = 529

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 19/119 (15%)

Query: 91  HRYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQI 144
            RY +R        +   C   CR C       S     L   D +  +   +      I
Sbjct: 141 RRYQNRFVRTAHWSITGKCNYRCRHC-----YMSAPDAKLGEIDHDTMMDLARQIADCGI 195

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
            EV  TGG+PL+       +++  L        +R        + + ++ +L+  L+E 
Sbjct: 196 LEVSLTGGEPLVRRDFM--ELVDALLSY----RIRIA--QIYTNGKLVDEKLLDQLEER 246


>gi|310658009|ref|YP_003935730.1| radical sam domain-containing protein [Clostridium sticklandii DSM
           519]
 gi|308824787|emb|CBH20825.1| Radical SAM domain protein [Clostridium sticklandii]
          Length = 453

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            L+K  + CP  C FCF +E+          ++D E  +A I +  +  E+     D  +
Sbjct: 184 ALIKTSYGCPYNCSFCFCKEITSG----KYYARDIEDVVAEISQIPE-KEIYIVDDD-FL 237

Query: 157 LSHKRLQKVLKTLRY 171
            +  RL+K +  L+ 
Sbjct: 238 YNEDRLKKFIALLKE 252


>gi|297545376|ref|YP_003677678.1| Radical SAM domain-containing protein [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296843151|gb|ADH61667.1| Radical SAM domain protein [Thermoanaerobacter mathranii subsp.
           mathranii str. A3]
          Length = 453

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 5/64 (7%)

Query: 99  LKLLHVCPVYCRFCFR----REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           L L + C + C +C+     R          L  +  +    +I E+  I  +IF GG+P
Sbjct: 72  LHLTYGCNMNCPYCYIPESYRRNYQKMSYNQL-EEIIDKLSKWINERGGIKRIIFHGGEP 130

Query: 155 LILS 158
           L+  
Sbjct: 131 LLAK 134


>gi|289207329|ref|YP_003459395.1| molybdenum cofactor biosynthesis protein A [Thioalkalivibrio sp.
           K90mix]
 gi|288942960|gb|ADC70659.1| molybdenum cofactor biosynthesis protein A [Thioalkalivibrio sp.
           K90mix]
          Length = 334

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 3/90 (3%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           + L +   C + C +C  +     ++    LS ++ E  +           V  TGG+PL
Sbjct: 22  VRLSVTDRCDLRCFYCMPKGFRDFEEPEHWLSFEEIERVMGAFGRLGT-RRVRLTGGEPL 80

Query: 156 ILSH-KRLQKVLKTLRYIKHVQILRFHSRV 184
           +  +   L   L  L  I  + +    +R+
Sbjct: 81  VRKNLPDLAARLNALPGIDDISLSTNATRM 110


>gi|325958807|ref|YP_004290273.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21]
 gi|325330239|gb|ADZ09301.1| Radical SAM domain protein [Methanobacterium sp. AL-21]
          Length = 506

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P +++  +   C + C  C+  E  G +    L+S+  +  L  +  +S +  + F+GG+
Sbjct: 126 PFQVVWNITKSCNMNCAHCY--ENAGKKADDELNSEQIKQCLETL-SRSGVTSIAFSGGE 182

Query: 154 P 154
           P
Sbjct: 183 P 183


>gi|299140666|ref|ZP_07033804.1| 2-methylthioadenine synthetase [Prevotella oris C735]
 gi|298577632|gb|EFI49500.1| 2-methylthioadenine synthetase [Prevotella oris C735]
          Length = 446

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 58/141 (41%), Gaps = 14/141 (9%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C      G  +   ++S   +A  A  +   +I   + TG +
Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVAQAEEAAAEGGKEI---VLTGVN 209

Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                  +H++   ++K L  ++ ++  R  S    ++P  I+ +LI    E+       
Sbjct: 210 IGHFGETTHEKFIDLVKALDKVEGIKRFRISS----LEPDLIDDDLIAFCAESR---AFM 262

Query: 211 IHANHPYEFSEEAI-AAISRL 230
            H + P +   +A+   + RL
Sbjct: 263 PHFHIPLQSGSDAVLKLMHRL 283


>gi|296242351|ref|YP_003649838.1| radical SAM domain-containing protein [Thermosphaera aggregans DSM
           11486]
 gi|296094935|gb|ADG90886.1| Radical SAM domain protein [Thermosphaera aggregans DSM 11486]
          Length = 306

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C FC R  + G  +  VL+  D    LAY+  K  I     TGG+PL+  
Sbjct: 15  IVVTMRCNYNCIFCHREGLTGLDRAEVLTPDDY-RYLAYVSRKLGIVYFKITGGEPLLRR 73

Query: 159 H 159
            
Sbjct: 74  D 74


>gi|257793769|ref|ZP_05642748.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|258420985|ref|ZP_05683916.1| conserved hypothetical protein [Staphylococcus aureus A9719]
 gi|257787741|gb|EEV26081.1| conserved hypothetical protein [Staphylococcus aureus A9781]
 gi|257842933|gb|EEV67351.1| conserved hypothetical protein [Staphylococcus aureus A9719]
          Length = 381

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++  P E  + + ++    L  I             ++C + C  C             +
Sbjct: 10  IHNDPWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56

Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +  +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 57  DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 109


>gi|302541842|ref|ZP_07294184.1| basic proline-rich protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302459460|gb|EFL22553.1| basic proline-rich protein [Streptomyces himastatinicus ATCC 53653]
          Length = 569

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 14/81 (17%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-----LAYIQEKSQIWEVIFTG 151
           +LL +   CP+ C  C           + + S+  +AA     +       +   V+ TG
Sbjct: 17  VLLTVTRRCPLACAHC--------STASSMGSEQIDAAVLKRFVGTFTPADRPEYVLLTG 68

Query: 152 GDPLILSHKRLQKVLKTLRYI 172
           G+PL L  + + ++ + +R +
Sbjct: 69  GEPL-LRPRLVAEIAERVRDV 88


>gi|297566420|ref|YP_003685392.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
           silvanus DSM 9946]
 gi|296850869|gb|ADH63884.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
           silvanus DSM 9946]
          Length = 371

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 8/114 (7%)

Query: 96  RILLKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           R L   +  CP  C +C        G      L     EAA  Y +    +  +   GG 
Sbjct: 2   RSLYVHVPFCPTLCPYCDFHVVRRYGGVVEAYLERLAEEAAALYERFPGPLETLYLGGGT 61

Query: 154 PLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           P  L ++ L+++ + L + +  +  +         +P  +NPE ++ LK+ G  
Sbjct: 62  PSFLRNRELEQLFRALPWNVPSIHEVTME-----ANPGTLNPERLELLKDLGVN 110


>gi|258405933|ref|YP_003198675.1| Radical SAM domain-containing protein [Desulfohalobium retbaense
           DSM 5692]
 gi|257798160|gb|ACV69097.1| Radical SAM domain protein [Desulfohalobium retbaense DSM 5692]
          Length = 442

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 50/239 (20%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
             LL++   C + C  CF R +     GT          +A+I+E +    +  +GG+P 
Sbjct: 91  TTLLEVTQRCNLGCPICFARSL---DSGTDPDLDTLARNMAHIRETAGPCTLQLSGGEP- 146

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYI---- 209
            +    L +++  L   ++ ++++ ++        R    PE  + L+EAG         
Sbjct: 147 TVRDD-LPEIV-RLAAAQNFRLVQLNTNGL-----RFAREPEYARALREAGLEAVFFQFD 199

Query: 210 AIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264
           ++H             EE   A++ +  AG+ ++    L+ G+N         +   +  
Sbjct: 200 SVHDADYTTIRGRALWEEKQQALTAMGRAGLGVVLVPTLVPGVNTRA------IGAILRF 253

Query: 265 RIKPYYLHHPDLAAGTSHFRLTIE---------------EGQKIVASLKEKISGLCQPF 308
            ++    HHP +  G  HF+  I                   +I+ +L+E+ +GL +  
Sbjct: 254 GVQ----HHP-VVRGV-HFQ-PISYFGRYPAPPADTDRLTLPEIMRALEEQTAGLVRTQ 305


>gi|219853185|ref|YP_002467617.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
 gi|219547444|gb|ACL17894.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c]
          Length = 381

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 53/231 (22%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  I   +   CP+ C  C+       +   VLS+++  + +  I+   +   V+ +GG+
Sbjct: 31  PRIISWNITLRCPLKCAHCYVDAG-EKEADRVLSTQEALSVIDQIRAIGKP-VVVLSGGE 88

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS----RVPI-VDPQRINPELIQCLKEAG-KPV 207
           PL         + + +  I      R+ +    R+ +      I+ E    LKEAG + V
Sbjct: 89  PL---------LREDMYDIA-----RYGTEQGLRMVMGTSGYLIDQETAAKLKEAGIRAV 134

Query: 208 YI-------AIH--ANHPYEFSEEAIAAISRLANAGIIL-LSQSVLLKGINDDPEILANL 257
            I       A H          E+A  AI    +AGI + ++ SV+   I+     + +L
Sbjct: 135 AISLDSKDPATHDAFRGLDGVWEKATKAIGHCHDAGIAVQINMSVMRSAIS----EVEDL 190

Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI-------VASLKEKI 301
           +     L +  Y L           F +     ++I          +  +I
Sbjct: 191 IGLGTSLGVHDYQLF----------FPIPTGRARQIEPRSPEEYEEMIRRI 231


>gi|115622853|ref|XP_791955.2| PREDICTED: similar to MGC84142 protein, partial [Strongylocentrotus
           purpuratus]
          Length = 267

 Score = 37.0 bits (85), Expect = 4.5,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 4/89 (4%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
            R+ + + + L   C + C++C   E V  S K  +LS+++             + ++  
Sbjct: 81  QRHHNYLRISLTERCNLRCQYCMPEEGVTLSPKERLLSTEEILHLAKLFVS-EGVDKIRL 139

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           TGG+PL+     + ++++ LR ++ ++ +
Sbjct: 140 TGGEPLVRKD--IVEIIEGLRELEGLKQI 166


>gi|304314983|ref|YP_003850130.1| Fe-S oxidoreductase [Methanothermobacter marburgensis str. Marburg]
 gi|302588442|gb|ADL58817.1| predicted Fe-S oxidoreductase [Methanothermobacter marburgensis
           str. Marburg]
          Length = 491

 Score = 37.0 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 30/170 (17%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPL 155
           L+ + + C + C  CF    V        + ++    L  ++    +    + + GG+P 
Sbjct: 93  LIDVTNRCNLKCPICFANAAVSKY-LYEPTYEEIREMLRNLRRNRPVPTPAIQYAGGEPT 151

Query: 156 ILSH-KRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           +      L K+ +      HVQI    +R   +          PEL   L+EAG    + 
Sbjct: 152 VRKDIVELVKLARE-EGFTHVQIATNGVRLARK----------PELAAELREAGLNT-VY 199

Query: 211 IHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           +  +   E               + AI     AG+ ++    L++G+ND 
Sbjct: 200 LQFDGVTEEPYLVSRGKNLLPLKLQAIENCRKAGLGIVLVPTLVRGLNDS 249


>gi|302385311|ref|YP_003821133.1| MiaB-like tRNA modifying enzyme [Clostridium saccharolyticum WM1]
 gi|302195939|gb|ADL03510.1| MiaB-like tRNA modifying enzyme [Clostridium saccharolyticum WM1]
          Length = 454

 Score = 37.0 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 46/131 (35%), Gaps = 25/131 (19%)

Query: 94  PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  +K+   C  +C +C     R  +   +   V+       A  Y        E++F
Sbjct: 159 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRKPDEVVEEVKRLTASGY-------QEIVF 211

Query: 150 TGGD----PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
           TG       +    K    L  ++K +  ++ ++ +R  S    ++P+ +  +    L  
Sbjct: 212 TGIHLSSYGMDFPEKERLTLLDLVKRVHEVEGLKRIRLGS----LEPRIVTEKFAAELAR 267

Query: 203 AGKPVYIAIHA 213
             K   I  H 
Sbjct: 268 LSK---ICPHF 275


>gi|268607898|ref|ZP_06141629.1| thiamine biosynthesis protein ThiH [Ruminococcus flavefaciens FD-1]
          Length = 483

 Score = 37.0 bits (85), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 93  YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y DRI+    L L + C   C +C   +         L+  +    +  +Q+       I
Sbjct: 88  YGDRIVMFAPLYLSNYCVNQCVYCPYHQQNKEIPRKKLTQDEVRDEVIALQDMGHKRLAI 147

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
             G DP+    + + + + T+  IKH
Sbjct: 148 EAGEDPVNNPIEYILECINTIYSIKH 173


>gi|262201214|ref|YP_003272422.1| molybdenum cofactor biosynthesis protein A [Gordonia bronchialis
           DSM 43247]
 gi|262084561|gb|ACY20529.1| molybdenum cofactor biosynthesis protein A [Gordonia bronchialis
           DSM 43247]
          Length = 365

 Score = 37.0 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + +   C + C +C   E +       +LS+ +    L        +  + FTGG+PL+ 
Sbjct: 44  VSVTDRCNLRCTYCMPAEGLDWMDSAELLSTDELVRVLTVAVRDLGVHRIRFTGGEPLLR 103

Query: 158 SHKRLQKVLKTLRYIKH 174
               L++++  +  +  
Sbjct: 104 RD--LEEIIARMAALPQ 118


>gi|297583859|ref|YP_003699639.1| radical SAM domain-containing protein [Bacillus selenitireducens
           MLS10]
 gi|297142316|gb|ADH99073.1| Radical SAM domain protein [Bacillus selenitireducens MLS10]
          Length = 372

 Score = 37.0 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 25/196 (12%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  ++ ++   C + C  C             L+ K+    +  I E      ++FTGGD
Sbjct: 9   PFIVIWEVTRACELRCLHCRADAQTEPHPDE-LNHKEGLRLIDAIHEMDNPM-LVFTGGD 66

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208
            ++         L  L      + +R  S  P      +  E ++  KE G   +     
Sbjct: 67  CMMRED------LFELADYAIQKGMRV-SMTPSAT-DNVTKEKMEKAKEVGLSRWAFSLD 118

Query: 209 -----IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262
                I  H       F    +  I+ L    + L   +V+ K      E +A L+    
Sbjct: 119 GPTPEIHDHFRGTSGSFD-LTLDKINYLKELDMPLQINTVISKYNYHALEEMAALVEELD 177

Query: 263 ELRIKPYYLHHPDLAA 278
              +  +Y+       
Sbjct: 178 ---VIMWYIFLLVPTG 190


>gi|86609143|ref|YP_477905.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus
           sp. JA-2-3B'a(2-13)]
 gi|123502140|sp|Q2JKY0|MIAB_SYNJB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|86557685|gb|ABD02642.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 444

 Score = 37.0 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 20/142 (14%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGG- 152
              + +++ C   C +C    + G ++     S+  +A  A I+   ++   EV   G  
Sbjct: 146 TAWINVIYGCNERCTYCIVPRVRGQEQ-----SRQPQAIRAEIEDVARAGYREVTLLGQN 200

Query: 153 -DPL---ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            D     +     L  +L+ +  ++ ++ +RF +  P         ELI    E  K   
Sbjct: 201 IDAYGRDLDPKTNLASLLRFVHSVEGIERIRFATSHPRY----FTEELITTCAELPK--- 253

Query: 209 IAIHANHPYEF-SEEAIAAISR 229
           +  H + P++  S E +  + R
Sbjct: 254 VCEHFHIPFQAGSNEVLKRMRR 275


>gi|78223499|ref|YP_385246.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacter
           metallireducens GS-15]
 gi|123756395|sp|Q39TA3|MIAB_GEOMG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|78194754|gb|ABB32521.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacter metallireducens
           GS-15]
          Length = 441

 Score = 37.0 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 17/121 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGD--- 153
           + ++  C  +C +C     V   +G  +S +  E  +  I+      + EV   G +   
Sbjct: 152 VTVMQGCDNFCSYCI----VPYVRGREISRRSVE-IIGEIRSAVAGGVREVTLLGQNVNS 206

Query: 154 PLILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
             + +   L    +L+ +  I  ++ +RF +      P+ I+PELI C  E  K +   I
Sbjct: 207 YGLKTPGELSFAGLLREISAIDGLERIRFTTSH----PKDISPELIACFAELPK-LCGHI 261

Query: 212 H 212
           H
Sbjct: 262 H 262


>gi|325831056|ref|ZP_08164380.1| radical SAM domain protein [Eggerthella sp. HGA1]
 gi|325486977|gb|EGC89423.1| radical SAM domain protein [Eggerthella sp. HGA1]
          Length = 475

 Score = 37.0 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 19/119 (15%)

Query: 91  HRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQI 144
            RY +R +      +   C   CR C       S     L   D +  +   +      I
Sbjct: 87  RRYQNRFVRTAHWSITGKCNYRCRHC-----YMSAPDAKLGEIDHDTMMDLARQIADCGI 141

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
            EV  TGG+PL+       +++  L        +R        + + ++ +L+  L+E 
Sbjct: 142 LEVSLTGGEPLVRRDFM--ELVDALLSY----RIRIA--QIYTNGKLVDEKLLDQLEER 192


>gi|302341873|ref|YP_003806402.1| nitrogenase cofactor biosynthesis protein NifB [Desulfarculus
           baarsii DSM 2075]
 gi|301638486|gb|ADK83808.1| nitrogenase cofactor biosynthesis protein NifB [Desulfarculus
           baarsii DSM 2075]
          Length = 428

 Score = 37.0 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 7/80 (8%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAY----IQEKSQIWEVI 148
            R  L +  +C + C +C RR    ++    +SS   +   A AY    +Q + ++    
Sbjct: 22  GRAHLPVAPLCNIKCNYCDRRYDCVNESRPGVSSAVLQPHQAQAYMERALQAEPRLSVAG 81

Query: 149 FTG-GDPLILSHKRLQKVLK 167
             G GDPL  +   L+ +L+
Sbjct: 82  IAGPGDPLANAEATLETILR 101


>gi|217969807|ref|YP_002355041.1| ribosomal RNA large subunit methyltransferase N [Thauera sp. MZ1T]
 gi|217507134|gb|ACK54145.1| Radical SAM domain protein [Thauera sp. MZ1T]
          Length = 347

 Score = 37.0 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 38/215 (17%)

Query: 104 VCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161
            C V C FC    M G       L S +  A +A  +   ++ +V+F G G+P       
Sbjct: 104 GCAVGCVFC----MTGKDGLLRQLDSGEIVAQVALARRLRRVHKVVFMGMGEPA----HN 155

Query: 162 LQKVLKTLR------YIKH-------VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           L  V++ +        + H       V  LR   R+P     R+ P L   L      + 
Sbjct: 156 LDAVIEAIELLGTEGALPHKNLVLSTVGDLRVFERLPQ---MRVKPALALSLHSTRAALR 212

Query: 209 IAIHANHPYEFSE-EAIAAISRLANA-GIILLSQSVLLKGINDDPEILANLMRTFVE--- 263
            A+    P      E +      A A G  +  Q  L++G+ND  + L  ++R       
Sbjct: 213 AALLPRAPR-IDPAELVELGEAWARASGYPIQYQWTLIEGVNDGEDELEGIVRLLAGKYA 271

Query: 264 -LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297
            + + P      +   G  + R   E   +I   L
Sbjct: 272 VMNMIP-----FNRVDGLDYRRPAAESAAEIARRL 301


>gi|150396791|ref|YP_001327258.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium medicae
           WSM419]
 gi|166217890|sp|A6U9U3|MOAA_SINMW RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|150028306|gb|ABR60423.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium medicae
           WSM419]
          Length = 349

 Score = 37.0 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 21/172 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++     +       + ++  TGG+PL+  
Sbjct: 34  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELHRLCSAFIA-KGVRKLRLTGGEPLVRK 92

Query: 159 HKR--LQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
           +    ++++ K +    +  + +    S++      +   EL+ C       V +     
Sbjct: 93  NIMFLIRELGKEIEAGRLDELTLTTNGSQL-----SKFAAELVDC-GVRRINVSLDTLDP 146

Query: 212 ----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
                     E ++  +  I     AG+ +   +V LK  ND    +  LMR
Sbjct: 147 DKFRQITRWGELTK-VLEGIDAALAAGLKVKINAVALKDFND--AEIPELMR 195


>gi|309789580|ref|ZP_07684161.1| RNA modification enzyme, MiaB family [Oscillochloris trichoides
           DG6]
 gi|308228316|gb|EFO81963.1| RNA modification enzyme, MiaB family [Oscillochloris trichoides
           DG6]
          Length = 450

 Score = 37.0 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 27/149 (18%)

Query: 67  LNILPEERED----PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122
           L   P    D    P+ D  H P+          + + + + C + C +C   +  G ++
Sbjct: 133 LAPNPIYTLDEPALPVRDAAHPPVA---------VHVPIQYGCNMRCSYCVIPQRRGRER 183

Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFT------GGDPLILSHKRLQKVLKTLRYIKHVQ 176
              L   +  A +  I +      V+        G D  +    +L  +++ +  I  + 
Sbjct: 184 SRSL--DEIVAEVTRIVDHGAREIVLLGQIVDSWGHD--LPGRPQLADLIRAVHAIPGLL 239

Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            LRF +      P  +   LI+ +    +
Sbjct: 240 RLRFLTSH----PAWMTDHLIETVASLPR 264


>gi|229096386|ref|ZP_04227358.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-29]
 gi|228686948|gb|EEL40854.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-29]
          Length = 383

 Score = 37.0 bits (85), Expect = 4.7,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 32/184 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++    +   Y  E   +   +FTG
Sbjct: 15  PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGRKLIDDIYEMENPML---VFTG 70

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 71  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 121

Query: 209 --------IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
                   I  H       ++ +  +I  +  L    I +   +V+ K   D  + +A L
Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNSIRYLHELK---IPIQINTVVSKYNVDVLKEMAML 178

Query: 258 MRTF 261
           +   
Sbjct: 179 IEEL 182


>gi|260893438|ref|YP_003239535.1| molybdenum cofactor biosynthesis protein A [Ammonifex degensii KC4]
 gi|260865579|gb|ACX52685.1| molybdenum cofactor biosynthesis protein A [Ammonifex degensii KC4]
          Length = 316

 Score = 37.0 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 12/85 (14%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQEKSQI--WEVIFTGGD 153
           + +   C + CR+C        +    ++  +    E  +  ++  ++I   +V  TGG+
Sbjct: 8   VSVTDRCNLRCRYCL-----PPEGVKTVAHAEILRFEEIVRIVKAATRIGVRKVRLTGGE 62

Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178
           PL+   + L  ++  L  I+ +  L
Sbjct: 63  PLV--RRNLSSLVAQLAAIEEIDDL 85


>gi|157146881|ref|YP_001454200.1| coproporphyrinogen III oxidase [Citrobacter koseri ATCC BAA-895]
 gi|157084086|gb|ABV13764.1| hypothetical protein CKO_02656 [Citrobacter koseri ATCC BAA-895]
          Length = 445

 Score = 37.0 bits (85), Expect = 4.8,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 56/145 (38%), Gaps = 12/145 (8%)

Query: 62  PQKEELNILPEEREDPIGDNNHSP-LKGIVHRY---PDRILLKLLHVCPVYCRFC-FRRE 116
           P K+    +P     P+     S   + ++ +      R++   +  C  +C FC F + 
Sbjct: 20  PFKDRRATMPWRGAIPVAKEQLSQTWQNVISQTVPPRKRLVYLHIPFCATHCTFCGFYQN 79

Query: 117 MVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY- 171
                     +    ++ E  A + + + + I  V F GG P  LS + L K++ TLR  
Sbjct: 80  RFEEDHCARYTDALLREIEMEADSTLHQSAPIHAVYFGGGTPSALSARDLAKIITTLREK 139

Query: 172 --IKHVQILRFHSRVPIVDPQRINP 194
             +     +    RV   D  R++ 
Sbjct: 140 LPLAPDCEITIEGRVLNFDDARVDA 164


>gi|323345505|ref|ZP_08085728.1| MiaB tRNA modifying enzyme-like protein [Prevotella oralis ATCC
           33269]
 gi|323093619|gb|EFZ36197.1| MiaB tRNA modifying enzyme-like protein [Prevotella oralis ATCC
           33269]
          Length = 432

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 14/115 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----QI--WEVIFT 150
             LK+   C  +C +C    + G  K       +    +  +        QI   E+ + 
Sbjct: 138 AYLKIAEGCDRHCAYCAIPLITG--KHVSRPKAEILQEVEELVANGVKEFQIIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G D  I   + +  ++  +  IK V+ +R H   P   P     EL+  +KE   
Sbjct: 196 GVD--IDGKRHIADLISAIADIKGVKWIRLHYAYPNQFPM----ELLDVMKEKSN 244


>gi|293332751|ref|NP_001168389.1| hypothetical protein LOC100382158 [Zea mays]
 gi|223947957|gb|ACN28062.1| unknown [Zea mays]
          Length = 774

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 20/105 (19%)

Query: 55  PIARQFIPQKEELNILPEEREDP-------IGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107
           PI R  +  +EEL++ P E+ D          ++ +SP   +               C  
Sbjct: 288 PITRLVVSLREELHVHPYEKIDWKAARNSCAKEDVYSPHTWLQ-------------ECLS 334

Query: 108 YCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           +C + F    +     + +  K  +    +++ + +  + I  G 
Sbjct: 335 HCLYSFGEPFLTRWPISYMRKKALQQVAEFLKYEDENSQYICIGA 379


>gi|169335672|ref|ZP_02862865.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258410|gb|EDS72376.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM
           17244]
          Length = 454

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 12/129 (9%)

Query: 63  QKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRIL-----LKLLHVCPVYCRFCFRRE 116
            +EE+  +  E ++   +N  ++P K +  +  ++ +     L + H C + CR+CF   
Sbjct: 53  DEEEIKEVIGELKELEAENRLYTPEKKVNRKLYEKGIVKAMCLHVSHDCNLACRYCFASG 112

Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTL--RY 171
              + K  V++ +  + A+ +I   S      EV F GG+PL L+   ++K ++      
Sbjct: 113 GNFNMKKEVMNIETAKKAIDFIISNSGNKVHLEVDFFGGEPL-LNFDVVKKTVEYAKEEA 171

Query: 172 IKHVQILRF 180
            KH +I RF
Sbjct: 172 KKHNKIFRF 180


>gi|85860714|ref|YP_462916.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
 gi|85723805|gb|ABC78748.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB]
          Length = 396

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 35/135 (25%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-------QEKSQIWEVIFTG 151
             +   C + C +C+   ++G  K   +S      A+ YI        E S IW+ I  G
Sbjct: 26  FIVTEDCQLRCGYCY---IIGKNKFNRMSFTIARTAVDYILHNRALFWEDSVIWDFI--G 80

Query: 152 GDPLI---LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI----------NPELIQ 198
           G+PL+   L  +    + + +  + H          P  +  R             ++ +
Sbjct: 81  GEPLLEIELIDRICDYIKRRMYELDH----------PWFNSYRFSFSTNGLLYGTEKVQR 130

Query: 199 CLKEAGKPVYIAIHA 213
            +++    + I+I  
Sbjct: 131 FIRKNAHHLSISISI 145


>gi|332981504|ref|YP_004462945.1| Radical SAM domain-containing protein [Mahella australiensis 50-1
           BON]
 gi|332699182|gb|AEE96123.1| Radical SAM domain protein [Mahella australiensis 50-1 BON]
          Length = 454

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 7/85 (8%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L L H C + C +CF        + T++++    AAL ++   S      EV F GG+PL
Sbjct: 99  LHLSHDCNMRCSYCFASTGDFGGQRTLMTADTGRAALDFLVRHSGSRRHLEVDFFGGEPL 158

Query: 156 ILSH--KRLQKVLKTLRYI--KHVQ 176
           +     K + +  + L     KH++
Sbjct: 159 MNFDAMKDIVEYGRRLEQSSGKHIR 183


>gi|322833884|ref|YP_004213911.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rahnella sp. Y9602]
 gi|321169085|gb|ADW74784.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rahnella sp. Y9602]
          Length = 474

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 8/118 (6%)

Query: 96  RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
              + ++  C  YC FC     R E V      VL      AA    +       V    
Sbjct: 148 TAFVSIMEGCNKYCSFCVVPYTRGEEVSRPCDDVLFEVAQLAAQGVREVNLLGQNVNAYR 207

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           GD          ++L+ +  I  +  +RF +  P+        ++I+  K+  + V  
Sbjct: 208 GDAFEGGVCTFAELLRLVAAIDGIDRIRFTTSHPV----EFTDDIIEVYKDTPEVVSF 261


>gi|229115397|ref|ZP_04244804.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock1-3]
 gi|228668011|gb|EEL23446.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock1-3]
          Length = 383

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 32/184 (17%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++    +   Y  E   +   +FTG
Sbjct: 15  PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGRKLIDDIYEMENPML---VFTG 70

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208
           GDPL+      + +           + +R  S  P   P  +  E IQ  KE G   +  
Sbjct: 71  GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 121

Query: 209 --------IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257
                   I  H       ++ +  +I  +  L    I +   +V+ K   D  + +A L
Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNSIRYLHELK---IPIQINTVVSKYNVDVLKEMAML 178

Query: 258 MRTF 261
           +   
Sbjct: 179 IEEL 182


>gi|218506865|ref|ZP_03504743.1| coproporphyrinogen III oxidase [Rhizobium etli Brasil 5]
          Length = 135

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 4/75 (5%)

Query: 105 CPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160
           C   C +C      R     Q+    +  +  AA+  +     +  +   GG P ++  +
Sbjct: 6   CAAKCPYCDFNSHVRHQPVDQERFAAAFLNETAAVRAMSGPKTVTSIFLGGGTPSLMKPE 65

Query: 161 RLQKVLKTLRYIKHV 175
            +  +L ++    HV
Sbjct: 66  TVAAILDSIARHWHV 80


>gi|164686956|ref|ZP_02210984.1| hypothetical protein CLOBAR_00582 [Clostridium bartlettii DSM
           16795]
 gi|164603841|gb|EDQ97306.1| hypothetical protein CLOBAR_00582 [Clostridium bartlettii DSM
           16795]
          Length = 166

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 23/54 (42%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
              CP +C+ CF  E      G     ++ +  L  I + S   ++   GG+PL
Sbjct: 23  TQGCPHHCKGCFNGETWDFNSGKEFKKENLDYILENINKNSVQRDLSILGGEPL 76


>gi|299531597|ref|ZP_07045002.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
           S44]
 gi|298720313|gb|EFI61265.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
           S44]
          Length = 380

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 40/244 (16%), Positives = 80/244 (32%), Gaps = 46/244 (18%)

Query: 99  LKLLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+           ++LS ++             + ++  TGG+
Sbjct: 44  ISVTDRCNFRCNYCMPKEVFDKNYQYLPHSSLLSFEEITRLARLFVAH-GVRKLRLTGGE 102

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGK 205
           PL+   K ++ ++  L  +          R P   P  +             + LKEAG 
Sbjct: 103 PLL--RKNIEALIAQLAEL----------RTPDGQPLDLTLTTNASLLARKARALKEAGL 150

Query: 206 PVYIA-------IHANHPYEFS---EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEIL 254
                              +      + +A I     AG+  +    V+ +G NDD   +
Sbjct: 151 NRVTVSLDGLDDTVFRRMNDVDFPVTDVLAGIEAAQTAGLSHIKVNMVVKRGTNDD--QI 208

Query: 255 ANLMRTFVELRIKPYYLHHP-DLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILD 312
             + R F    I              T+ +R+  +    +++A L+ ++     P     
Sbjct: 209 LPMARYFRGTGIT--LRFIEYMDVGATNGWRMDEVLPSDEVIARLRAELP--LIP-LAPS 263

Query: 313 LPGG 316
            PG 
Sbjct: 264 APGE 267


>gi|228924516|ref|ZP_04087716.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228835141|gb|EEM80582.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 378

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151
           P  ++ +L   C + C  C R E    +    L+ ++ +  +   Y  +   +   +FTG
Sbjct: 15  PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDVYEMDNPML---VFTG 70

Query: 152 GDPLILSH 159
           GDPL+   
Sbjct: 71  GDPLMHPD 78


>gi|169343771|ref|ZP_02864770.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
           C str. JGS1495]
 gi|169298331|gb|EDS80421.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens
           C str. JGS1495]
          Length = 331

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 33/81 (40%), Gaps = 4/81 (4%)

Query: 99  LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C  +          +++  +    +        I +V  TGG+PL+ 
Sbjct: 22  ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 79

Query: 158 SHKRLQKVLKTLRYIKHVQIL 178
             + +  ++K +  I  ++ +
Sbjct: 80  -REGIVDLIKNINKIPEIEEI 99


>gi|167768199|ref|ZP_02440252.1| hypothetical protein CLOSS21_02755 [Clostridium sp. SS2/1]
 gi|317499083|ref|ZP_07957362.1| thiazole biosynthesis protein ThiH [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|167709723|gb|EDS20302.1| hypothetical protein CLOSS21_02755 [Clostridium sp. SS2/1]
 gi|291560220|emb|CBL39020.1| iron-only hydrogenase maturation protein HydG [butyrate-producing
           bacterium SSC/2]
 gi|316893603|gb|EFV15806.1| thiazole biosynthesis protein ThiH [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 472

 Score = 37.0 bits (85), Expect = 4.9,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 93  YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y +RI+    L L + C   C +C         +   L+ ++ +  +  +Q+       +
Sbjct: 80  YGNRIVMFAPLYLANYCVNGCTYCPYHYKNKHIRRKKLTQEEIKKEVIALQDMGHKRLAL 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
            TG DP+ +  + + + +KT+  IKH
Sbjct: 140 ETGEDPVNIPIEYVLESIKTIYSIKH 165


>gi|323704599|ref|ZP_08116177.1| biotin and thiamin synthesis associated [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323536061|gb|EGB25834.1| biotin and thiamin synthesis associated [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 466

 Score = 37.0 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 6/114 (5%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREM 117
             EE  +L    +D I +  +   + I  + Y +RI+    L + + C   CR+C  +  
Sbjct: 43  TPEEAAVLLNLEDDEILEEMYKVARYIKEQIYGNRIVIFAPLYISNYCVNNCRYCGYKH- 101

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
              Q+   L+  +    +  ++E       +  G DP+      +  V+KT+  
Sbjct: 102 SNEQERKRLTMDEVRREIEILEEMGHKRLAVEAGEDPVNCPIDYVLDVIKTIYD 155


>gi|254489978|ref|ZP_05103173.1| molybdenum cofactor biosynthesis protein A [Methylophaga
           thiooxidans DMS010]
 gi|224465063|gb|EEF81317.1| molybdenum cofactor biosynthesis protein A [Methylophaga
           thiooxydans DMS010]
          Length = 335

 Score = 37.0 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 3/78 (3%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + + +   C   C +C   EM    +  +L+ ++    +    E   + +V  TGG+PLI
Sbjct: 19  VRMSITDRCDFRCVYCMDEEMTFMPREQLLTLEEIVFLMRAFCE-LGVEKVRITGGEPLI 77

Query: 157 LSHKRLQKVLKTLRYIKH 174
              + +  + + +  +KH
Sbjct: 78  --RRNVDWLFEQIGQLKH 93


>gi|110681057|ref|YP_684064.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter
           denitrificans OCh 114]
 gi|123361551|sp|Q161G5|MIAB_ROSDO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|109457173|gb|ABG33378.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter
           denitrificans OCh 114]
          Length = 441

 Score = 37.0 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 39/120 (32%), Gaps = 14/120 (11%)

Query: 74  REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSK 129
            ED   +    P      R P    L +   C  +C FC     R   V      VL   
Sbjct: 132 PEDKFEELKARPK---ARRAPS-AFLTVQEGCDKFCAFCVVPYTRGAEVSRPVTRVLDEA 187

Query: 130 D--TEAALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
               E  +  I    Q +      G D    + K L +++  L  I  ++ +RF +  P 
Sbjct: 188 RDLVERGVREITLLGQNVNAYHGAGADG---NEKTLAQLIWALNDIDGLERIRFTTSHPN 244


>gi|91774915|ref|YP_544671.1| GTP cyclohydrolase subunit MoaA [Methylobacillus flagellatus KT]
 gi|91708902|gb|ABE48830.1| GTP cyclohydrolase subunit MoaA [Methylobacillus flagellatus KT]
          Length = 329

 Score = 37.0 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 4/85 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C              L+ ++ E  +    +   +  V  TGG+PL+ 
Sbjct: 21  LSVTDRCDLRCHYCMPVGFSDYEIPDNWLTFEEIERVVNAFAK-LGVNAVRVTGGEPLLR 79

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182
               L  ++  L  I  +  +   +
Sbjct: 80  KD--LATLISNLSRINGLSDISLST 102


>gi|10639798|emb|CAC11770.1| coenzyme PQQ synthesis protein related protein [Thermoplasma
           acidophilum]
          Length = 401

 Score = 37.0 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 32/189 (16%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----VI 148
            P  I  +    C + C  C    ++      +      + ++ ++    +  +    VI
Sbjct: 41  KPLLIFWETTKACGLKCEHCRASAIL----DALPGEMTFDQSINFLSHIKEFGKPYPIVI 96

Query: 149 FTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
            TGGD  +L   R+  ++  LR   I         S  P V    +  E I   KE G  
Sbjct: 97  LTGGD--MLRKHRIWDIMDYLRSQEIPF-------SVSPAVT-DLLTHEAILKFKEFGVS 146

Query: 207 VYIAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLK-GINDDPEILA 255
             ++I  +   E  E+             AI  L + GI +   +V+++  ++D P +L 
Sbjct: 147 -SVSISLDGMREVHEKVRGVAGVYDDTVKAIEDLISTGISMQINTVVMRSTVHDLPHVLK 205

Query: 256 NLMRTFVEL 264
            ++   V++
Sbjct: 206 LIIDKGVKV 214


>gi|56708793|ref|YP_164834.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ruegeria
           pomeroyi DSS-3]
 gi|56680478|gb|AAV97143.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria pomeroyi DSS-3]
          Length = 462

 Score = 37.0 bits (85), Expect = 5.0,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 10/119 (8%)

Query: 75  EDPIGDNNHSPLKGIVHRYPD-RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSK 129
            D   ++    LKG           L +   C  +C FC     R   V      +L   
Sbjct: 151 TDFPEEDKFEKLKGRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRILREA 210

Query: 130 D--TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
           +   E  +  I    Q     + G  P       L  ++  L  I  ++ +RF +  P 
Sbjct: 211 NELVERGVREITLLGQ-NVNAYHGAGP--NGDMTLAGLIWELDKIDGLERIRFTTSHPN 266


>gi|331003287|ref|ZP_08326791.1| hypothetical protein HMPREF0491_01653 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412636|gb|EGG92020.1| hypothetical protein HMPREF0491_01653 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 714

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 4/79 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-- 156
             +   C + C++C+ ++   S+    ++    + AL Y  + +      F GG+PL+  
Sbjct: 23  FTVTQNCNLACKYCYEKKNNDSRMSIKVAKDAVDFALRY-GQHTNRARFDFMGGEPLLEI 81

Query: 157 -LSHKRLQKVLKTLRYIKH 174
            +  + +  +   L    H
Sbjct: 82  NMIDELMDYIKFKLYEENH 100


>gi|317484667|ref|ZP_07943568.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
 gi|316924023|gb|EFV45208.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6]
          Length = 397

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 23/114 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156
            ++   C + C+ C          G  LS+++ +A +        +    +IFTGGDP+I
Sbjct: 55  WEVTRSCNLACKHCRAEAHPEPYPGE-LSTEEAKALIDTF---PSVGNPIIIFTGGDPMI 110

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVP--IVDPQ--RINPELIQCLKEAGKP 206
                  +++               S+    ++ P    I PE  + +KEAG  
Sbjct: 111 RPDVY--ELIAYA-----------GSKGLRCVMSPNGTLITPENARKIKEAGVQ 151


>gi|285808444|gb|ADC35970.1| conserved hypothetical protein [uncultured bacterium 98]
          Length = 358

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 43/191 (22%)

Query: 104 VCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
            C + C FC   +  +V +     ++ +    A A          V+   G+PL      
Sbjct: 112 GCAMACGFCLTGKMGLVRNLTAGEIAGQVRVLAAATGLADQAFNIVLMGMGEPLHNYDNT 171

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL------IQCLKEAGK--PVYIAIHA 213
           ++ +   + + +H            + P+R+          ++ L        + +++HA
Sbjct: 172 MKAL--RMLHSEH---------GLSISPRRVTLSTVGIVPGLERLAREPLMPNLAVSLHA 220

Query: 214 NHPYEFSEEAIAAI----SRLANAGIILLSQS-------------VLLKGINDDPEILAN 256
                 ++E  +A+     +   A II   Q              VLL G+ND PE    
Sbjct: 221 T-----TDEQRSALVPPNRKYPLADIIAACQRFPLKQRSRITFEYVLLDGVNDSPEDARR 275

Query: 257 LMRTFVELRIK 267
           L+R    +R K
Sbjct: 276 LVRLLAGIRAK 286


>gi|298706473|emb|CBJ29460.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 369

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 6/103 (5%)

Query: 77  PIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135
           P  +++  S   G  H Y   + + L   C + C +C   + V  Q  + + ++     L
Sbjct: 34  PGHEHSMLSDTHGRHHNY---LRISLTERCNLRCVYCMPEDGVDLQPQSKMINQQEILRL 90

Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           A +   + + ++  TGG+PL+     L  +++ L  ++ V+ +
Sbjct: 91  ASMFVDAGVDKIRLTGGEPLVRKD--LPDIVRALSSLEGVRNV 131


>gi|297538387|ref|YP_003674156.1| coenzyme PQQ biosynthesis protein E [Methylotenera sp. 301]
 gi|297257734|gb|ADI29579.1| coenzyme PQQ biosynthesis protein E [Methylotenera sp. 301]
          Length = 409

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 3/92 (3%)

Query: 81  NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140
            N+     I    P  +L ++ + CP++C FC+            L+++    AL   ++
Sbjct: 20  QNNGVAANITQTQPLWLLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARK 79

Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
              I ++  +GG+PL+     ++ ++   R +
Sbjct: 80  MGAI-QLGISGGEPLLRDD--IEDIVIEARKL 108


>gi|281425800|ref|ZP_06256713.1| 2-methylthioadenine synthetase [Prevotella oris F0302]
 gi|281400061|gb|EFB30892.1| 2-methylthioadenine synthetase [Prevotella oris F0302]
          Length = 446

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 13/123 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  LK+   C  +C +C      G  +   ++S   +A  A  +   +I   + TG +
Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVAQAEEAAAEGGKEI---VLTGVN 209

Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
                  +H++   ++K L  ++ ++  R  S    ++P  I+ +LI    E+       
Sbjct: 210 IGHFGETTHEKFIDLVKALDKVEGIKRFRISS----LEPDLIDDDLIAFCAESR---AFM 262

Query: 211 IHA 213
            H 
Sbjct: 263 PHF 265


>gi|258406367|ref|YP_003199109.1| Radical SAM domain-containing protein [Desulfohalobium retbaense
           DSM 5692]
 gi|257798594|gb|ACV69531.1| Radical SAM domain protein [Desulfohalobium retbaense DSM 5692]
          Length = 465

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 10/117 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P+   +     CP  C +C  R +          S   E    Y   ++ + +  F   D
Sbjct: 225 PEYAPILGSRGCPYGCEYCASRHLYSGFVQRSFESVWQEFRAQY---QAGVRDFAFY-DD 280

Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVY 208
            L+L     L   L  +  +   + +R H+  P     Q + PE+ + L  AG    
Sbjct: 281 ALLLRPTTWLLPFLHQICELP--EPIRLHT--PNAMHVQALTPEVCRALFRAGLTTI 333


>gi|327440950|dbj|BAK17315.1| 2-methylthioadenine synthetase [Solibacillus silvestris StLB046]
          Length = 449

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 13/125 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149
             R  LK+   C  +C FC      G  +        +  +  +   Y++          
Sbjct: 147 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEEVIRQAQQLVDAGYLEIVLTGIHTGG 206

Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
            G D        L ++L+ L   +K ++ LR  S    ++  ++  E+I  L+ +   V 
Sbjct: 207 YGQD---FKDYNLAQLLRDLEAQVKGLKRLRISS----IEASQLTDEVIDVLQNSEI-VV 258

Query: 209 IAIHA 213
             +H 
Sbjct: 259 NHLHI 263


>gi|307822344|ref|ZP_07652576.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylobacter
           tundripaludum SV96]
 gi|307736910|gb|EFO07755.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylobacter
           tundripaludum SV96]
          Length = 438

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 19/126 (15%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153
           +  + ++  C  YC FC     V         S+  +  +A I    K  + E+   G +
Sbjct: 135 KAFVSVMEGCSKYCTFC-----VVPYTRGEEISRPLDDVIAEITSLAKQGVREINLLGQN 189

Query: 154 P----LILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                  +    +     +L  +  ++ +  +RF +      P     ELI+   E    
Sbjct: 190 VNAYRGEMDDGDIADFALLLHYVAAVEGIDRIRFTTSH----PMEFTDELIEAFAEIP-Q 244

Query: 207 VYIAIH 212
           +   +H
Sbjct: 245 LVDHLH 250


>gi|222102888|ref|YP_002539927.1| molybdenum cofactor biosynthesis protein A [Agrobacterium vitis S4]
 gi|221739489|gb|ACM40222.1| molybdenum cofactor biosynthesis protein A [Agrobacterium vitis S4]
          Length = 342

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%)

Query: 88  GIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQ 143
           G++ R+  R+    L +   C + C +C    M    K  VLS  + E  A+A+I+    
Sbjct: 13  GLIDRFGRRVTYLRLSVTDRCDLRCMYCMPENMTFMPKRDVLSIDELERLAVAFIRS--G 70

Query: 144 IWEVIFTGGDPLI 156
           +  +  TGG+PL+
Sbjct: 71  VTRIRLTGGEPLV 83


>gi|134278002|ref|ZP_01764717.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei 305]
 gi|226199930|ref|ZP_03795480.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
           pseudomallei Pakistan 9]
 gi|254177591|ref|ZP_04884246.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei ATCC 10399]
 gi|254191326|ref|ZP_04897830.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|254195707|ref|ZP_04902133.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei S13]
 gi|254199311|ref|ZP_04905677.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei FMH]
 gi|254205625|ref|ZP_04911977.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei JHU]
 gi|254296954|ref|ZP_04964407.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei 406e]
 gi|134251652|gb|EBA51731.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei 305]
 gi|147748907|gb|EDK55981.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei FMH]
 gi|147753068|gb|EDK60133.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei JHU]
 gi|157808020|gb|EDO85190.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei 406e]
 gi|157938998|gb|EDO94668.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei Pasteur 52237]
 gi|160698630|gb|EDP88600.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei ATCC 10399]
 gi|169652452|gb|EDS85145.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei S13]
 gi|225927986|gb|EEH24023.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
           pseudomallei Pakistan 9]
          Length = 227

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%)

Query: 93  YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
           YP +   +  +  CP  C +C        Q  +  +  + +A LA++  +   I  V+F+
Sbjct: 12  YPGQFAAVVFVQGCPWRCGYC---HNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFS 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           GG+P I     L         I  V+ L
Sbjct: 69  GGEPSI--DPALA------ASIDDVRRL 88


>gi|228476318|ref|ZP_04061019.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|314936068|ref|ZP_07843417.1| radical SAM superfamily domain protein [Staphylococcus hominis
           subsp. hominis C80]
 gi|228269601|gb|EEK11107.1| conserved hypothetical protein [Staphylococcus hominis SK119]
 gi|313655885|gb|EFS19628.1| radical SAM superfamily domain protein [Staphylococcus hominis
           subsp. hominis C80]
          Length = 381

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 16/137 (11%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     ++C + C  C     + ++    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTNLCNMRCSHCAVGYTLQTKDPDPLPMNLIYQRLDEI---PNLRTMSITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215
            S K +  V+K L    H + +       +  PQ    E+ + +          +H +H 
Sbjct: 90  FSKKSINNVVKPLLKYAHQRGIYVQMNSNLTLPQDRYLEIAEYID--------VMHISHN 141

Query: 216 ---PYEFSEEAIAAISR 229
                EF+E    A+ +
Sbjct: 142 WGTIQEFAEVGFGAMKK 158


>gi|255659775|ref|ZP_05405184.1| RNA modification enzyme, MiaB family [Mitsuokella multacida DSM
           20544]
 gi|260847845|gb|EEX67852.1| RNA modification enzyme, MiaB family [Mitsuokella multacida DSM
           20544]
          Length = 455

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 29/164 (17%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD 153
              +K+   C   C FC    + G  +     S+  E     ++  ++  + EV+    D
Sbjct: 145 TAYVKIAEGCNNRCAFCAIPYIRGDYR-----SRRIEDICDEVRHLTENGVREVVLIAQD 199

Query: 154 PL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207
                  +    +L ++L+ +  +  +Q +R         P+  + ELI+ +    K   
Sbjct: 200 STEYGRDLYGAPKLSELLREIVKVPKLQWVR----TLYSYPKYFSDELIETIASEPKICK 255

Query: 208 YIAIHANHP-----YEF-----SEEAIAAISRLANA--GIILLS 239
           Y+ +   H               EE  A I +L     G+ + S
Sbjct: 256 YVDLPLQHAHDAVLRSMRRPDTQEEMRALIKKLRERIPGVTIRS 299


>gi|217420779|ref|ZP_03452284.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
           pseudomallei 576]
 gi|217396191|gb|EEC36208.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
           pseudomallei 576]
          Length = 227

 Score = 36.6 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%)

Query: 93  YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
           YP +   +  +  CP  C +C        Q  +  +  + +A LA++  +   I  V+F+
Sbjct: 12  YPGQFAAVVFVQGCPWRCGYC---HNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFS 68

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           GG+P I     L         I  V+ L
Sbjct: 69  GGEPSI--DPALA------ASIDDVRRL 88


>gi|291549607|emb|CBL25869.1| Fe-S oxidoreductase [Ruminococcus torques L2-14]
          Length = 342

 Score = 36.6 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 19/95 (20%)

Query: 95  DRILLKLLHVCPVY-CRFC-------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           + ++L++   C    C FC       F R      +  +  + D+E A  Y         
Sbjct: 16  ESLMLRVTRGCHWNKCYFCDLYKKYKFSRRRYEEIEEDLKKAADSEYAQNY-------TT 68

Query: 147 VIFTGGDPLILSHKRLQKVLKT----LRYIKHVQI 177
                GD  +L  + L ++L+     L  IKHV  
Sbjct: 69  CFLQDGDAFVLRTEFLMQILEGIHKYLPNIKHVTT 103


>gi|242398860|ref|YP_002994284.1| molybdenum cofactor biosynthesis protein [Thermococcus sibiricus MM
           739]
 gi|242265253|gb|ACS89935.1| molybdenum cofactor biosynthesis protein [Thermococcus sibiricus MM
           739]
          Length = 586

 Score = 36.6 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 33/177 (18%)

Query: 91  HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEV 147
           HR    +L + L + C + C +CF     G Q     + +     L   + +  I    V
Sbjct: 133 HRSHTNLLNIVLTNRCNLSCWYCFFYHKEG-QPVYEPTLEQIRMMLRNAKSEEPIGANAV 191

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEA 203
            FTGG+P +         +       H+Q     +RF             PEL++ ++EA
Sbjct: 192 QFTGGEPSLRDDIIEIIKIAKEEGYDHIQFNTDGIRFA----------FEPELVKRVREA 241

Query: 204 GKPVYIAIHA----------NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
           G   +  +            NH  E        + +    GI+L+    L++ +ND 
Sbjct: 242 GVNTFY-LSFDGVTPKTNWKNHW-EI-PLIFENVRKAGGPGIVLV--PTLIRNVNDH 293


>gi|320165712|gb|EFW42611.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 429

 Score = 36.6 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 197 IQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243
           +  L +    P+ +A+H++   E   E I A SRL +    L +QS L
Sbjct: 277 VNLLDQYNMSPLLVAVHSSASNEILAELIRAGSRLHDIHYTLDNQSPL 324


>gi|315586279|gb|ADU40660.1| possible 2-methylthioadenine synthase [Helicobacter pylori 35A]
          Length = 418

 Score = 36.6 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C     V  +  +    K  E     +     + EV+ TG +
Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCSKGVQEVVLTGTN 189

Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
                  +   + +++K L  I  ++ +R  S
Sbjct: 190 VGSYGKDKGSNIVRLIKKLSQIAGLKRIRIGS 221


>gi|283852881|ref|ZP_06370142.1| radical SAM enzyme, Cfr family [Desulfovibrio sp. FW1012B]
 gi|283571710|gb|EFC19709.1| radical SAM enzyme, Cfr family [Desulfovibrio sp. FW1012B]
          Length = 350

 Score = 36.6 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 69/199 (34%), Gaps = 41/199 (20%)

Query: 96  RILLKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWE 146
              L     C + C FC      FRR M   +            A  Y+ EK     +  
Sbjct: 101 TACLSTQVGCAMGCAFCATGMMGFRRNMTPGEMLG-----QVLVARQYLLEKGVALALRN 155

Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           ++F G G+PL+        ++KTL  + H Q      R   V    +   L+   +    
Sbjct: 156 LVFMGMGEPLLNYDN----LVKTLEALHHPQGFDISGRRITVSTAGVARHLLDLGRTGLC 211

Query: 206 PVYIAIHANHPYEFSEEAIAAI----SRL-ANAGIILLSQSV------------LLKGIN 248
            + +++HA      ++     I    ++L     I +L Q              +L G+N
Sbjct: 212 SLAVSLHAP-----TQALREKIMPGAAKLPLGELIEILRQYPMKPRERLTFEYLMLDGVN 266

Query: 249 DDPEILANLMRTFVELRIK 267
           D  E    L+R    ++ K
Sbjct: 267 DSLEDARELVRLLSRVKAK 285


>gi|300087524|ref|YP_003758046.1| MiaB-like tRNA modifying enzyme [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
 gi|299527257|gb|ADJ25725.1| MiaB-like tRNA modifying enzyme [Dehalogenimonas
           lykanthroporepellens BL-DC-9]
          Length = 400

 Score = 36.6 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 13/122 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +K+   C   C +C     V  +K  V   K  +   A  + +    EV+ TG +
Sbjct: 127 RTRSFIKIQDGCDYRCAYCI-VPTVRPRKSAVPVEKVIDEIRA--RRREGCREVVLTGTE 183

Query: 154 P--LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
                  +  L  ++  +     ++ LR  S    + P+ I PEL+ C +       +  
Sbjct: 184 IGEYRTGNTALAGLIDAVLKETDIERLRISS----LQPREITPELMACWRNPR----MCR 235

Query: 212 HA 213
           H 
Sbjct: 236 HF 237


>gi|317151835|ref|YP_004119883.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316942086|gb|ADU61137.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 289

 Score = 36.6 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 14/94 (14%)

Query: 95  DRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI----QEKSQIWEVIF 149
           D ILL++   C    C FC      G+ +G     KD E  +  I    +   +   V  
Sbjct: 15  DSILLQVTLGCSHGKCAFC------GAYQGKRFGIKDRETVVRDIAFAARHCRRQRRVFL 68

Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHS 182
             GD +IL   RL ++L  +R  +  V   R  +
Sbjct: 69  CDGDAMILPQPRLLEILADIRRELPWVT--RVGT 100


>gi|254429447|ref|ZP_05043154.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alcanivorax sp. DG881]
 gi|196195616|gb|EDX90575.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alcanivorax sp. DG881]
          Length = 445

 Score = 36.6 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 23/126 (18%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF----- 149
             + ++  C  YC FC     V         S+  +  L+ IQ      + EV       
Sbjct: 149 AFVSIMEGCSKYCTFC-----VVPYTRGEEVSRPVQPVLSEIQHLADMGVREVNLLGQNV 203

Query: 150 -----TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLK 201
                 G D   L    L  +++ +R I  +  +R+ +  P+       ++  ++ + + 
Sbjct: 204 NAYQGVGADGDTLD---LADLIRLIRDIDGIDRIRYTTSHPVEFSDALIQVYEDVPELVS 260

Query: 202 EAGKPV 207
               PV
Sbjct: 261 HLHLPV 266


>gi|94264953|ref|ZP_01288725.1| Radical SAM [delta proteobacterium MLMS-1]
 gi|93454609|gb|EAT04884.1| Radical SAM [delta proteobacterium MLMS-1]
          Length = 358

 Score = 36.6 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 5/89 (5%)

Query: 77  PIGDNNHSPLKGIVHRYPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134
           P+ +++       +   P    +   LL  C + CR C+            ++  + +  
Sbjct: 4   PMNEHHPQQSPRTLFFKPGERNVFFHLLTACNLSCRHCYIN--PDQHGRATVTRAEIDHW 61

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
           LA +    Q   V+F GG+P  L  + L 
Sbjct: 62  LARLAAPEQQSNVVFLGGEP-SLHPELLH 89


>gi|78187582|ref|YP_375625.1| MiaB-like tRNA modifying enzyme [Chlorobium luteolum DSM 273]
 gi|78167484|gb|ABB24582.1| MiaB-like tRNA modifying enzyme [Chlorobium luteolum DSM 273]
          Length = 438

 Score = 36.6 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 24/144 (16%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  LK+   C   C +C     R      +   VL      A   Y        E++ 
Sbjct: 147 RTRAFLKIQDGCDYLCAYCTIPLARGRSRSIEPEDVLRQAHRLAGSGY-------REIVL 199

Query: 150 TG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
           +G   GD           +L+ L  +  V  +R  S    ++P  ++P  +Q +  + + 
Sbjct: 200 SGVNTGDYRSGGVDF-PALLRMLEEVP-VSRIRISS----LEPDMLSPAFLQVVGSSAR- 252

Query: 207 VYIAIHANHP-YEFSEEAIAAISR 229
             I  H + P    S+  + A+ R
Sbjct: 253 --IVPHFHLPLQSGSDPVLRAMRR 274


>gi|15678994|ref|NP_276111.1| pyruvate formate-lyase activating enzyme related protein
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622075|gb|AAB85472.1| pyruvate formate-lyase activating enzyme related protein
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 304

 Score = 36.6 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 7/73 (9%)

Query: 105 CPVYCRFC--FRREMVGS----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           CP  C +C  +R           +G V + +  + A+  I+   +I  + FTGG+P  + 
Sbjct: 52  CPFRCAYCNAYRISQYPHSGWIYRGHVEAEELADEAITAIKSHERISNISFTGGEP-SIH 110

Query: 159 HKRLQKVLKTLRY 171
              ++++++ +R 
Sbjct: 111 TPYIEELVRRVRE 123


>gi|317476990|ref|ZP_07936232.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides eggerthii
           1_2_48FAA]
 gi|316906783|gb|EFV28495.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides eggerthii
           1_2_48FAA]
          Length = 432

 Score = 36.6 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 18/115 (15%), Positives = 44/115 (38%), Gaps = 14/115 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIW----EVIFT 150
             LK+   C   C +C    + G      +  ++    + Y+  +   +      E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISRPI--EEILDEVRYLVTRGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
           G D  +   + L ++++ +  +  V+ +R H   P   P     +L + ++E   
Sbjct: 196 GVD--LYKKQMLPELIERISDVPGVEWIRLHYAYPAHFPM----DLFRVMRERSN 244


>gi|288926974|ref|ZP_06420870.1| 2-methylthioadenine synthetase [Prevotella buccae D17]
 gi|288336257|gb|EFC74642.1| 2-methylthioadenine synthetase [Prevotella buccae D17]
          Length = 275

 Score = 36.6 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 20/118 (16%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---------IWEV 147
             LK+   C  +C +C    M G      +     +  L  ++E              E+
Sbjct: 138 AYLKIAEGCDRHCAYCAIPLMTGRHVSRPM-----DEILDEVRELVAGGVKEFQVIAQEL 192

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
            + G D  +  H  + +++  +  I  V+ +R H   P   P     +L+  ++E   
Sbjct: 193 TYYGID--LDGHHHIAELISRMADIPGVKWIRLHYAYPNQFPM----DLLDVMRERPN 244


>gi|167581236|ref|ZP_02374110.1| radical SAM domain protein [Burkholderia thailandensis TXDOH]
          Length = 239

 Score = 36.6 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 93  YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
           YP +   +  +  CP  C +C        Q  +  +  + +A LA++  +   I  V+F+
Sbjct: 24  YPGQLAAVVFVQGCPWRCGYC---HNPHLQPRSRPAEIEWDALLAFLARRVGLIDAVVFS 80

Query: 151 GGDPLILSHKRLQKVLKTLRYI 172
           GG+P I     L   +  +R +
Sbjct: 81  GGEPSI--DPALAAAIDDVRRL 100


>gi|320538377|ref|ZP_08038252.1| MiaB-like tRNA modifying enzyme [Treponema phagedenis F0421]
 gi|320144762|gb|EFW36503.1| MiaB-like tRNA modifying enzyme [Treponema phagedenis F0421]
          Length = 454

 Score = 36.6 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 19/127 (14%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
            +  R  LK+   C   C +C R      +  ++  ++    A A   E     E++ +G
Sbjct: 167 LFHSRATLKIQDGCNSACAYC-RIRFARGKSVSLPVTEVIRRAQA--IEDEGFAELVLSG 223

Query: 152 GDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
              + LS      K    VL+ L      +  + H R+  + P+ I P  ++  +     
Sbjct: 224 ---VNLSQYKSEGKNFADVLQQLLD----ETKKIHIRISSLYPESITPTFLKVAENPR-- 274

Query: 207 VYIAIHA 213
             IA H 
Sbjct: 275 --IAPHF 279


>gi|209525671|ref|ZP_03274208.1| RNA modification enzyme, MiaB family [Arthrospira maxima CS-328]
 gi|209493840|gb|EDZ94158.1| RNA modification enzyme, MiaB family [Arthrospira maxima CS-328]
          Length = 436

 Score = 36.6 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 21/146 (14%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW----EVIF 149
              + +++ C   C +C    + G+++      +   A +  +      ++      +  
Sbjct: 132 TAWVNVIYGCNERCTYCVVPNVRGTEQSRTP--EAIRAEMEELARAGYKEVTLLGQNIDA 189

Query: 150 TGGD-PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            G D P      R    L  +L  +  I  ++ +RF +  P          LI+   E  
Sbjct: 190 YGRDLPGSTPDGRHQHTLTDLLYYVHDIPGIERIRFATSHPRY----FTERLIRACAELP 245

Query: 205 KPVYIAIHANHP-YEFSEEAIAAISR 229
           K   +  H + P      + + A++R
Sbjct: 246 K---VCEHFHIPFQSGDNDVLKAMAR 268


>gi|195473019|ref|XP_002088794.1| GE18764 [Drosophila yakuba]
 gi|194174895|gb|EDW88506.1| GE18764 [Drosophila yakuba]
          Length = 255

 Score = 36.6 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 14/63 (22%)

Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMRTFVELRIKPYYLHHPD 275
            E +  A+ A+ RL ++G       VL+K + N   +  A L      +          D
Sbjct: 18  DEPTPNAVEALKRLRDSG-------VLVKFVTNTTKDSKATLHERLCRIG------FQLD 64

Query: 276 LAA 278
            + 
Sbjct: 65  PSE 67


>gi|157964955|ref|YP_001499779.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia massiliae
           MTU5]
 gi|229890633|sp|A8F2U6|MIAB_RICM5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157844731|gb|ABV85232.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia massiliae
           MTU5]
          Length = 450

 Score = 36.6 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%)

Query: 76  DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133
           D + +     L      YP      + +   C  +C FC     V         S++ E 
Sbjct: 134 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 186

Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178
                    +  +V+ +G   ++L               +   L  +LK L  I +++ L
Sbjct: 187 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 240

Query: 179 RFHSRVPI 186
           R+ +  PI
Sbjct: 241 RYITSHPI 248


>gi|119897481|ref|YP_932694.1| pyrroloquinoline quinone biosynthesis protein PqqE [Azoarcus sp.
           BH72]
 gi|119669894|emb|CAL93807.1| pyrroloquinoline quinone synthesis protein E [Azoarcus sp. BH72]
          Length = 384

 Score = 36.6 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L ++ + CP++C FC+   +  ++  T LS++D    L   +    + +  F+GG+PL+
Sbjct: 19  LLAEVTYRCPLHCAFCY-NPVDFARDDTELSTEDWLRVLREARAAGSV-QCGFSGGEPLM 76

Query: 157 LSHKRLQKVLKTLRYI 172
                L+ ++     +
Sbjct: 77  RDD--LEVLVAEAHRL 90


>gi|83720018|ref|YP_442340.1| radical SAM domain-containing protein [Burkholderia thailandensis
           E264]
 gi|167619323|ref|ZP_02387954.1| radical SAM domain protein [Burkholderia thailandensis Bt4]
 gi|257138539|ref|ZP_05586801.1| radical SAM domain-containing protein [Burkholderia thailandensis
           E264]
 gi|83653843|gb|ABC37906.1| radical SAM domain protein [Burkholderia thailandensis E264]
          Length = 239

 Score = 36.6 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 7/82 (8%)

Query: 93  YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
           YP +   +  +  CP  C +C        Q  +  +  + +A LA++  +   I  V+F+
Sbjct: 24  YPGQLAAVVFVQGCPWRCGYC---HNPHLQPRSRPAEIEWDALLAFLARRVGLIDAVVFS 80

Query: 151 GGDPLILSHKRLQKVLKTLRYI 172
           GG+P I     L   +  +R +
Sbjct: 81  GGEPSI--DPALAAAIDDVRRL 100


>gi|99080026|ref|YP_612180.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria sp. TM1040]
 gi|123077818|sp|Q1GK98|MIAB_SILST RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|99036306|gb|ABF62918.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria sp. TM1040]
          Length = 440

 Score = 36.6 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 13/110 (11%)

Query: 96  RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIF 149
              L +   C  +C FC     R   V      VL   +   E  +  I    Q     +
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPVDRVLREAEDLVERGVREITLLGQ-NVNAY 208

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
            G  P       L +++  L  I  ++ +RF +  P      +  +LI+ 
Sbjct: 209 HGAGP--NGDMTLAQLIWELDKIDGLERIRFTTSHPND----MMDDLIEA 252


>gi|308371235|ref|ZP_07424286.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu003]
 gi|308329484|gb|EFP18335.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu003]
          Length = 334

 Score = 36.6 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L ++  C + CR+C          +  +LS K+  A +        + +V  TGG+PLI 
Sbjct: 6   LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 64

Query: 158 SHKRLQKVLKTLRY 171
               L ++++TL  
Sbjct: 65  PD--LPEIVRTLSA 76


>gi|304437669|ref|ZP_07397621.1| MiaB family tRNA modification enzyme [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304369302|gb|EFM22975.1| MiaB family tRNA modification enzyme [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 429

 Score = 36.6 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 18/110 (16%)

Query: 82  NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQ 139
              PL G+ HR   R  LK+   C  +C FC      G  K   L+  +++ E   A   
Sbjct: 131 EDIPLHGVPHR--TRAFLKIEDGCQNFCSFCIIPYARGPVKSRPLAAVAREMEKLAA--- 185

Query: 140 EKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182
             +   EV+ T       G D  +     L    +T    K V+ LR  S
Sbjct: 186 --AGFREVVLTGIHLGAYGID--LPQRPTLADACRTALRTKEVRRLRLGS 231


>gi|284050979|ref|ZP_06381189.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Arthrospira
           platensis str. Paraca]
          Length = 452

 Score = 36.6 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 21/146 (14%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW----EVIF 149
              + +++ C   C +C    + G+++      +   A +  +      ++      +  
Sbjct: 148 TAWVNVIYGCNERCTYCVVPNVRGTEQSRTP--EAIRAEMEELARAGYKEVTLLGQNIDA 205

Query: 150 TGGD-PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            G D P      R    L  +L  +  I  ++ +RF +  P          LI+   E  
Sbjct: 206 YGRDLPGSTPDGRHQHTLTDLLYYVHDIPGIERIRFATSHPRY----FTERLIRACAELP 261

Query: 205 KPVYIAIHANHP-YEFSEEAIAAISR 229
           K   +  H + P      + + A++R
Sbjct: 262 K---VCEHFHIPFQSGDNDVLKAMAR 284


>gi|237737580|ref|ZP_04568061.1| thiamine biosynthesis protein ThiH [Fusobacterium mortiferum ATCC
           9817]
 gi|229419460|gb|EEO34507.1| thiamine biosynthesis protein ThiH [Fusobacterium mortiferum ATCC
           9817]
          Length = 471

 Score = 36.6 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L + + C   C +C  +          L+ ++    +  +++      V+  G DP+  S
Sbjct: 92  LYVSNYCVNNCVYCGYQHCNEDLNRKKLTREELVNEVKALEKLGHKRIVLEAGEDPINCS 151

Query: 159 HKRLQKVLKTLRYIK----HVQILRF 180
              + + +K +  IK    +++ +  
Sbjct: 152 LDYILQCIKDIYSIKFENGNIRRINI 177


>gi|218264182|ref|ZP_03478066.1| hypothetical protein PRABACTJOHN_03756 [Parabacteroides johnsonii
           DSM 18315]
 gi|218222228|gb|EEC94878.1| hypothetical protein PRABACTJOHN_03756 [Parabacteroides johnsonii
           DSM 18315]
          Length = 293

 Score = 36.6 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 17/133 (12%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQEKSQIWEVIFTGG 152
           +++ + + + C   C FC      G +KG   S    +    L       QI E+ F+GG
Sbjct: 7   NKLRILVTNKCNYQCPFC---HNEGQEKGVKFSMMSFDSFKMLIDFLNDQQISEINFSGG 63

Query: 153 DPLILSHKRLQKVLKTLRYIK-HVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           +P +      ++++K + Y   H++  +   + +       I  E I  LK       I 
Sbjct: 64  EPFLH-----KEIVKMICYADQHMKCDISCATNL-----SLITDEQIDILKGTRVKFNIQ 113

Query: 211 IHANHPYEFSEEA 223
                  EFS+  
Sbjct: 114 FPFISEKEFSKST 126


>gi|182439559|ref|YP_001827278.1| hypothetical protein SGR_5766 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178468075|dbj|BAG22595.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 779

 Score = 36.6 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 24/129 (18%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAY----IQEKSQIW----- 145
           +LK+   C + C  C+    V        S++     + A+++    + E +        
Sbjct: 12  VLKVHSRCDLACDHCY----VYEHADQSWSTRPRTISDEAISWTARRLAEHATTHALPSV 67

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKE 202
            VI  GG+PL+    RL++V + L    +      LR H+        +++P  +    E
Sbjct: 68  TVILHGGEPLLAGPARLRRVCEELGSALNGIAELDLRIHTNGV-----QLSPRYLDLFDE 122

Query: 203 AGKPVYIAI 211
               V I++
Sbjct: 123 FHVRVGISL 131


>gi|167969718|ref|ZP_02551995.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis H37Ra]
 gi|215405104|ref|ZP_03417285.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis 02_1987]
 gi|215432065|ref|ZP_03429984.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis EAS054]
 gi|218754879|ref|ZP_03533675.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis GM 1503]
 gi|219559151|ref|ZP_03538227.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis T17]
 gi|254552189|ref|ZP_05142636.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis '98-R604 INH-RIF-EM']
 gi|308374774|ref|ZP_07437356.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu006]
 gi|308340798|gb|EFP29649.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu006]
          Length = 335

 Score = 36.6 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L ++  C + CR+C          +  +LS K+  A +        + +V  TGG+PLI 
Sbjct: 7   LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 65

Query: 158 SHKRLQKVLKTLRY 171
               L ++++TL  
Sbjct: 66  PD--LPEIVRTLSA 77


>gi|332975771|gb|EGK12652.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Desmospora sp. 8437]
          Length = 448

 Score = 36.6 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 10/123 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150
             R  LK+   C  +C FC      G  +     S  +     +       +I    I T
Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLLRSRKPESVLRQARQLVD--AGYKEIVLTGIHT 199

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
           GG        +L  +L  L  ++ ++ +R  S    ++  +I+  +I  L ++ K +   
Sbjct: 200 GGYGEDFEDYKLADLLWDLDKVEGLKRIRISS----IEASQIDDRVIDVLNKSDK-MCRH 254

Query: 211 IHA 213
           +H 
Sbjct: 255 LHI 257


>gi|227824689|ref|ZP_03989521.1| RNA modification enzyme [Acidaminococcus sp. D21]
 gi|226905188|gb|EEH91106.1| RNA modification enzyme [Acidaminococcus sp. D21]
          Length = 435

 Score = 36.6 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 63/196 (32%), Gaps = 45/196 (22%)

Query: 61  IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120
           +P   E   L    +D                  DR  LK+   C  YC +C      G 
Sbjct: 128 LPVGSEFEDLAASVDDS----------------RDRAFLKIQEGCDQYCSYCIIPYARGH 171

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GGDPLILSHKRLQKVLKTLRYIKH 174
            +   LSS      + ++ E+     V+        G +    + +RL   +     +  
Sbjct: 172 LRSRPLSS--IRREVEHLTEEGYKEVVLLGIHLGCYGKE--TANGERLSDAVSAALSVPA 227

Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA-------------NHPYEFSE 221
           +  LR  S   +     + PEL++ ++E  +     +H              N PY+ + 
Sbjct: 228 LCRLRLGSLESV----EVQPELLRLMQEDPR-FCCHLHLPLQSGCDKILKAMNRPYD-TA 281

Query: 222 EAIAAISRLANAGIIL 237
                I R+  A   +
Sbjct: 282 RFKELIDRIRAAVPDV 297


>gi|206895115|ref|YP_002246513.1| tungsten-containing aldehyde ferredoxin oxidoreductase
           cofactor-modifying protein [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206737732|gb|ACI16810.1| tungsten-containing aldehyde ferredoxin oxidoreductase
           cofactor-modifying protein [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 356

 Score = 36.6 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 67/186 (36%), Gaps = 32/186 (17%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           RI ++L   C + C  CFR          ++  K  +  L  +        +I   G+PL
Sbjct: 21  RIYVELSRACNLACAMCFR-HTYEDHTRALMDEKTVQKMLQEVVNSPAEEVIIGGIGEPL 79

Query: 156 ILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAI-- 211
           +      + V+K L+   K V I    +         IN E+ + L +     VYI++  
Sbjct: 80  MHP--LWKNVVKELKNAYKRVTITTNGT--------LINREVAEFLVDQRVDEVYISVES 129

Query: 212 ----HANHPYEFSEEAIAAISRLANAG----IILLSQSVLLKG--INDDPEILANLMRTF 261
               H N   E +      I+ L         IL ++ VL K   + D       LM+  
Sbjct: 130 SPLGHNN--VENTFAVGDLITELKQRKNKMRPILSAEVVLTKSSLVED-----LELMKKL 182

Query: 262 VELRIK 267
               I+
Sbjct: 183 SRHGIR 188


>gi|218295831|ref|ZP_03496611.1| radical SAM enzyme, Cfr family [Thermus aquaticus Y51MC23]
 gi|218243569|gb|EED10097.1| radical SAM enzyme, Cfr family [Thermus aquaticus Y51MC23]
          Length = 349

 Score = 36.6 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 51/201 (25%)

Query: 93  YPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIW 145
           Y +R  + L  +  CP  C FC    +     G  L++ +  + L  I         +I 
Sbjct: 89  YKNRKTVCLSSMVGCPAGCTFCATGAL---GFGRNLTAAEILSQLLAIAHHQGLSPREIR 145

Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--- 201
            V+  G G+PL+     L+ +            +  H +   + P+RI    +   +   
Sbjct: 146 NVVLMGMGEPLLNLTNVLKAI-----------RVMLHPKALAMSPRRITLSTVGIPRGIL 194

Query: 202 -----EAGKPVYIAIHA------------NHPY---EFSEEAIAAISRLANAGIILLSQS 241
                + G  + +++HA             H Y   E          R         +  
Sbjct: 195 RLAEEDVGVRLALSLHAPDDETRRKIIPTAHRYPIAEIMAAVRRYYERTKRRVTFEYT-- 252

Query: 242 VLLKGINDD---PEILANLMR 259
            LLKG+ND      +LA L++
Sbjct: 253 -LLKGLNDHLWQARLLAKLLK 272


>gi|315923957|ref|ZP_07920185.1| radical SAM domain protein [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315622797|gb|EFV02750.1| radical SAM domain protein [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 354

 Score = 36.6 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 4/79 (5%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R L++  ++C   CR+C  R   G  +   L++++  A             V+ +G D  
Sbjct: 61  RGLIEFSNICRNDCRYCGIRRSNGRIERYRLTAEEILACCDQGYALGFRTFVLQSGEDTY 120

Query: 156 ILSHKRLQKVLKTLRYIKH 174
             +   L  ++     IKH
Sbjct: 121 Y-TDDALCALVAR---IKH 135


>gi|255011120|ref|ZP_05283246.1| putative anaerobic ribonucleoside-triphosphate reductase activating
           protein [Bacteroides fragilis 3_1_12]
 gi|313148931|ref|ZP_07811124.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides fragilis 3_1_12]
 gi|313137698|gb|EFR55058.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Bacteroides fragilis 3_1_12]
          Length = 154

 Score = 36.6 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 22/59 (37%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162
            C   C  C   E    Q G  L+ K  +  +  I     +  V F+GGDPL      L
Sbjct: 25  GCRHGCPGCHNPESWNPQAGDELTEKRLDCIIREINSNPLLDGVTFSGGDPLYNPEAFL 83


>gi|257792682|ref|YP_003183288.1| Radical SAM domain-containing protein [Eggerthella lenta DSM 2243]
 gi|257476579|gb|ACV56899.1| Radical SAM domain protein [Eggerthella lenta DSM 2243]
          Length = 475

 Score = 36.6 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 15/117 (12%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEV 147
            +R+       +   C   CR C       S     L   D +  +   +      I EV
Sbjct: 90  QNRFVRTAHWSITGKCNYRCRHC-----YMSAPDAKLGEIDHDTMMDLARQIADCGILEV 144

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
             TGG+PL+       +++  L        +R        + + ++ +L+  L+E G
Sbjct: 145 SLTGGEPLVRRDFM--ELVDALLSY----RIRIA--QIYTNGKLVDEKLLDQLEERG 193


>gi|189423541|ref|YP_001950718.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189419800|gb|ACD94198.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 828

 Score = 36.6 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 66/184 (35%), Gaps = 34/184 (18%)

Query: 56  IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115
           + R+F+P  E              D   SP+   +    DR+ +++   C   CRFC   
Sbjct: 224 VRRRFLPDIE------------AADFPDSPIIPFLKTIHDRVAIEVARGCTRGCRFCQAG 271

Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEK---SQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172
            +    +    S +     +    +     +I  +  + GD        +  +L+ L   
Sbjct: 272 YIYRPLRER--SPQRINELIETSLKNTGYEEISLLSLSTGDY-----SCIAPLLQELMA- 323

Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA-IAAISRLA 231
           +H Q  R    +P +    + PELI  +++  K  +           + EA    + R+ 
Sbjct: 324 RHAQG-RVAVSLPSLRVGTLTPELIDEIRKVRKTGFT---------LAPEAGSERMRRVI 373

Query: 232 NAGI 235
           N GI
Sbjct: 374 NKGI 377


>gi|253989291|ref|YP_003040647.1| hypothetical protein PAU_01811 [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253780741|emb|CAQ83903.1| conserved hypothetical protein [Photorhabdus asymbiotica]
          Length = 353

 Score = 36.6 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 9/78 (11%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI----QEKSQIWEV 147
           +YP+   +   + C   C+ C           +V +    +    +I         +  V
Sbjct: 11  KYPNTATVITTYTCNAACKECC-----FECNPSVKARLSLDEIKQFIVHSKANFPGLKLV 65

Query: 148 IFTGGDPLILSHKRLQKV 165
           +F+GG+  +L    ++ +
Sbjct: 66  VFSGGECFLLGKDLIEAI 83


>gi|325968827|ref|YP_004245019.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28]
 gi|323708030|gb|ADY01517.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28]
          Length = 380

 Score = 36.6 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 11/124 (8%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI- 148
           +   P  +  +    CP+ CR C R   +     T LS+++++  +  +    + + V+ 
Sbjct: 14  LEEKPLLVFYETTKACPLACRHC-RANALLKPLPTELSTEESKRFIEDLTGFGKPYPVLI 72

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPV 207
            TGGDPL      L+        I H + L     + P V  + +N +L++ L+E    +
Sbjct: 73  LTGGDPLT-RDDILE-------LIDHAKSLGIPVALSPAVSTKLLNDDLLKELRERVNSI 124

Query: 208 YIAI 211
            I++
Sbjct: 125 SISL 128


>gi|319795394|ref|YP_004157034.1| radical SAM protein [Variovorax paradoxus EPS]
 gi|315597857|gb|ADU38923.1| Radical SAM domain protein [Variovorax paradoxus EPS]
          Length = 212

 Score = 36.6 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 15/95 (15%)

Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEVIFTGGDPLILSHK 160
              CRFC   + VG+        K  +     I        ++   V+ TGG+PL+    
Sbjct: 43  SAVCRFCD-TDFVGTDGTLGGKFKTADQLADTIAAQWPANDAEHRLVVLTGGEPLLQVD- 100

Query: 161 RLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRIN 193
               ++  L    H +  R    S   +  P+ I+
Sbjct: 101 --AALVDAL----HARRFRIAVESNGTVAAPEGID 129


>gi|310643698|ref|YP_003948456.1| astb/chur/nirj-like protein [Paenibacillus polymyxa SC2]
 gi|309248648|gb|ADO58215.1| AstB/chuR/nirj-like protein [Paenibacillus polymyxa SC2]
          Length = 397

 Score = 36.6 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 7/83 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIF 149
           P  I +KL + C + C  CF     G         ++ + A   +++      ++   ++
Sbjct: 42  PQTIGIKLTNRCNLRCTHCFEWNEEGYHHQMDKEEQNMDLAPDMLRQILSETKEVKSRLY 101

Query: 150 T-GGDPLILSHKRLQKVLKTLRY 171
             GG+P+    +R  ++L  L  
Sbjct: 102 MWGGEPMFH--RRFDEILDVLAE 122


>gi|302533615|ref|ZP_07285957.1| radical SAM domain-containing protein [Streptomyces sp. C]
 gi|302442510|gb|EFL14326.1| radical SAM domain-containing protein [Streptomyces sp. C]
          Length = 751

 Score = 36.6 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 67/188 (35%), Gaps = 35/188 (18%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEK------SQIWEV 147
           I+LK+   C + C  C+  E        +  V+S +      + + E         +  V
Sbjct: 10  IVLKVHSRCDLACDHCYVYEHADQSWRARPKVISPEVISQTASRLAEHARDHALPSVT-V 68

Query: 148 IFTGGDPLILSHKRL----QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           I  GG+PL+    RL    ++  + L     +  LR H+        +++   +    E 
Sbjct: 69  ILHGGEPLLAGPDRLRLVCEEFTRALAGTAGLD-LRIHTNGL-----QLSRRYLDLFAEY 122

Query: 204 GKPVYIAI---------H--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI---ND 249
           G  V +++         H             +AA+  L +A    L Q  LL  +   ND
Sbjct: 123 GVRVGVSLDGDRAANDRHRRFADGRSSHPLVLAALELLRSAPYRHLYQG-LLCTVDVAND 181

Query: 250 DPEILANL 257
              +L  L
Sbjct: 182 PVAVLDAL 189


>gi|225387767|ref|ZP_03757531.1| hypothetical protein CLOSTASPAR_01537 [Clostridium asparagiforme
           DSM 15981]
 gi|225046128|gb|EEG56374.1| hypothetical protein CLOSTASPAR_01537 [Clostridium asparagiforme
           DSM 15981]
          Length = 491

 Score = 36.6 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 55/176 (31%), Gaps = 45/176 (25%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  +K+   C  +C +C     R  +   +   VL    T AA  Y +       +  
Sbjct: 143 RTRAFIKVQDGCNQFCSYCIIPYARGRVRSRRPEEVLEEVRTLAAQGYKEMVLTGIHLSS 202

Query: 150 TGGD------PLILSHKR----------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193
            G D       LI    +          L ++++ +  ++ +  +R  S    ++P+ I 
Sbjct: 203 YGLDFENPESALIAGDYKAEENALYRPWLLRLIQEVSGVEGIGRIRLGS----LEPRIIT 258

Query: 194 PELIQCLKEAGK-----PVY-----------IAIHANHPYEFSEEAIAAISRLANA 233
            E    L +  K      +            +  H N     +EE       L  A
Sbjct: 259 REFAAELAKIPKLCPHFHLSLQSGCDATLKRMNRHYN-----TEEYRERCGILREA 309


>gi|296274304|ref|YP_003656935.1| coenzyme PQQ biosynthesis protein E [Arcobacter nitrofigilis DSM
           7299]
 gi|296098478|gb|ADG94428.1| coenzyme PQQ biosynthesis protein E [Arcobacter nitrofigilis DSM
           7299]
          Length = 368

 Score = 36.6 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 40/76 (52%), Gaps = 4/76 (5%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           LL+L H CP+ C +C+ +    + K + ++ +D    +   +    + ++ F+GG+PL+ 
Sbjct: 12  LLELTHKCPLECTYCYNQLDFANTKDS-MTKEDWFRVMEEARAMGAV-QLGFSGGEPLLN 69

Query: 158 SHKRLQKVLKTLRYIK 173
               + +++K    +K
Sbjct: 70  KD--ILEIVKKAAELK 83


>gi|162447121|ref|YP_001620253.1| radical SAM superfamily Fe-S oxidoreductase [Acholeplasma laidlawii
           PG-8A]
 gi|205829657|sp|A9NEU7|RLMN_ACHLI RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|161985228|gb|ABX80877.1| Fe-S-cluster redox enzyme, radical SAM superfamily [Acholeplasma
           laidlawii PG-8A]
          Length = 338

 Score = 36.6 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 39/246 (15%), Positives = 81/246 (32%), Gaps = 60/246 (24%)

Query: 89  IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA---LAYIQEKSQ-- 143
           + H Y     +     C + C FC          G +   +D  A       I+ + +  
Sbjct: 93  MSHNYGMSACVTTQVGCNIGCSFC--------ASGVLKKKRDLTAGEIVAQIIRAEKESG 144

Query: 144 --IWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
             +  ++  G G+P        +  +K +  + H + L   +R   V        L+  +
Sbjct: 145 VRVSSIVIMGIGEPF----DNYKNFVKFISIVNHPKGLAIGARHITVS----TSGLVPKI 196

Query: 201 KEAGK-----PVYIAIHANHPYEFSEEAIAAISRLANAG------------IILLSQSVL 243
           KE         + +++HA  P     E  + + ++ +              I + ++ V 
Sbjct: 197 KEFAHLGIQVNLAVSLHA--PN---NEIRSKLMKINDRFKVEEVVDAIKYYIHVTNRRVT 251

Query: 244 LKGI-----NDDPEILANLMRTFVELRI----KPYYLHHPDLAAGTSHFRLTIEEGQKIV 294
           ++ I     ND  E    L +    + +     PY     +      + R ++E      
Sbjct: 252 IEYIMIQDLNDSVETAVELAKLLKGMNVYVNLIPY-----NTVKEADYQRSSLENRLAFH 306

Query: 295 ASLKEK 300
            +LKE 
Sbjct: 307 KTLKEH 312


>gi|39935047|ref|NP_947323.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
           palustris CGA009]
 gi|123773347|sp|Q3V7S1|MOAA_RHOPA RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|39648898|emb|CAE27419.1| molybdenum biosynthetic protein A [Rhodopseudomonas palustris
           CGA009]
          Length = 344

 Score = 36.6 bits (84), Expect = 5.7,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 67/168 (39%), Gaps = 29/168 (17%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C   +M    +  +L+ ++ +   +       + ++  TGG+PL+  
Sbjct: 29  VSITDRCDFRCVYCMAEDMTFLPRADLLTLEELDRLCSAFIA-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLRYIKHVQI-----LRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
            + +  ++++L    H++      L      S++      R   EL  C     + V ++
Sbjct: 86  RRNMMSLVRSLSR--HLKTGALDELTLTTNGSQL-----ARFAAELADC---GVRRVNVS 135

Query: 211 IHANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250
           +    P EF             A I     AG+ +   SV+LKG N+D
Sbjct: 136 LDTLDPDEFRRITRWGDLERVLAGIDAARTAGLAVKINSVVLKGSNED 183


>gi|313203239|ref|YP_004041896.1| hypothetical protein Palpr_0757 [Paludibacter propionicigenes WB4]
 gi|312442555|gb|ADQ78911.1| conserved hypothetical protein [Paludibacter propionicigenes WB4]
          Length = 318

 Score = 36.6 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 16/110 (14%)

Query: 109 CRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIF------TGGDPLILSHKR 161
           C +C  +       K     S+  E  + + + K +    +          D L     +
Sbjct: 53  CTYCNNQSFSPEYCKPIKTVSQQVEEGINFFKHKYENQFYLAYFQSYTNTYDSL----DK 108

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
           L+ + +       V+ +   +R     P  +N EL+   +E  K VY+ I
Sbjct: 109 LKAIYEEALSHPQVKGIVVGTR-----PDCVNDELLDYFEELSKSVYVMI 153


>gi|61845111|emb|CAI70376.1| beta 1,4 N-acetylglucosaminyltransferase [Populus tremula x Populus
           alba]
          Length = 388

 Score = 36.6 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 11/95 (11%)

Query: 90  VHRYPD--------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141
           VHRY          R    +L     +C FCFRR      K    S  D      Y+   
Sbjct: 264 VHRYQTGKTRYAHYRQADDILADAGWHCSFCFRRISEFIFKDEAYSHVDKSRVQRYL-NP 322

Query: 142 SQIWEVIFTGGDPL-ILSHK-RLQKVLKTLRYIKH 174
            +I  VI  G D   +L  +   ++++  +  I H
Sbjct: 323 KRIQRVICKGADLFDMLPEEYTFKEIIGKMGPIPH 357


>gi|58617513|ref|YP_196712.1| hypothetical protein ERGA_CDS_07860 [Ehrlichia ruminantium str.
           Gardel]
 gi|58417125|emb|CAI28238.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel]
          Length = 405

 Score = 36.6 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 26/130 (20%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151
             R L+++ + C   C FC   +  G+ +         E  +  +++   +   EV+FTG
Sbjct: 126 KSRALIEIQNGCNHECTFCVITKARGNNRSLH-----IEDIITQVKDCVNNGYNEVVFTG 180

Query: 152 GDPLILSHKRLQKVLKT---------LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202
            D   +S   +    +          L  I  ++ LR  S + + +   I  +LI  +  
Sbjct: 181 VD---ISDFGIDIYGQRMLGVMIKRVLGAIPQLRRLRL-SSIDVAE---IEDDLIDII-- 231

Query: 203 AGKPVYIAIH 212
            G       H
Sbjct: 232 -GNEPRFMPH 240


>gi|262038001|ref|ZP_06011413.1| radical SAM family Fe-S protein [Leptotrichia goodfellowii F0264]
 gi|261747954|gb|EEY35381.1| radical SAM family Fe-S protein [Leptotrichia goodfellowii F0264]
          Length = 454

 Score = 36.6 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 46/251 (18%), Positives = 88/251 (35%), Gaps = 45/251 (17%)

Query: 58  RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117
           + +I     L  +P  R D I    +     IV          +   CP +C FC++   
Sbjct: 133 KMYISVHRSLENIPVVRRDLIKRERYLVPNSIV----------VTRGCPHHCDFCYKDAF 182

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177
              Q G    ++  + AL  I+        ++   D L+ + K  +++ + ++ +  V  
Sbjct: 183 Y--QNGKSFYTRLVDDALKEIESLPGRH--LYFLDDHLLGNPKFAKELFEGMKGMNRVFQ 238

Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI----------HANHPYEFSEEAIAAI 227
                         +  + I+   EAG                  +N       + I  +
Sbjct: 239 ------GAATIDSILTGDTIEKAAEAGLRSIFVGFETFSPENLKQSNKSQNLQRDYIKVV 292

Query: 228 SRLANAGIILLSQSVLLKGI-NDDPEILANLMRTFVELRIKP------YYLHHPDLAAGT 280
           +RL + GI++    V   G+ NDD ++     +  V+  +K       Y  H      GT
Sbjct: 293 NRLHSLGIMINGSFVF--GLDNDDKDV----FKRTVDWGVKNAITTSTY--HILTPYPGT 344

Query: 281 SHFRLTIEEGQ 291
             F+   E+G+
Sbjct: 345 RLFKRMEEDGR 355


>gi|253572329|ref|ZP_04849732.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|251838104|gb|EES66192.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
          Length = 393

 Score = 36.6 bits (84), Expect = 5.8,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 17/114 (14%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEV 147
           R  + I L +   C   C  CF            ++ K+ +     I++      +I ++
Sbjct: 5   RKLESIFLFVTGKCNAKCAMCF--------YANDMAKKERDLTFEEIRKISETAGEINKL 56

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
             +GG+P  L  + L ++L+      H++ +   +      P R+  E ++  +
Sbjct: 57  WVSGGEP-TLR-EDLPEILEMFYQNNHIKDVNMPTNGL--KPDRV-IEWVERFR 105


>gi|295696097|ref|YP_003589335.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
 gi|295411699|gb|ADG06191.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
          Length = 358

 Score = 36.6 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG 152
           +   +VC  +C FC+ R     +    +S    +  L Y++E     I E    GG
Sbjct: 58  INPTNVCEAHCGFCYYRRDPDQEGAYTMSP---DEVLEYVKERWTPGIREFHIVGG 110


>gi|289596878|ref|YP_003483574.1| molybdenum cofactor biosynthesis protein A [Aciduliprofundum boonei
           T469]
 gi|289534665|gb|ADD09012.1| molybdenum cofactor biosynthesis protein A [Aciduliprofundum boonei
           T469]
          Length = 308

 Score = 36.6 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 8/64 (12%)

Query: 99  LKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           + +   C + C +C R            + ++  + E  L  I  +  I +V FTGG+PL
Sbjct: 14  VSVTERCNLNCFYCHREGEWHR----HHSEMTPDEIERILK-IARELDIRKVKFTGGEPL 68

Query: 156 ILSH 159
             + 
Sbjct: 69  CRND 72


>gi|229828421|ref|ZP_04454490.1| hypothetical protein GCWU000342_00482 [Shuttleworthia satelles DSM
           14600]
 gi|229793015|gb|EEP29129.1| hypothetical protein GCWU000342_00482 [Shuttleworthia satelles DSM
           14600]
          Length = 450

 Score = 36.6 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 49/135 (36%), Gaps = 25/135 (18%)

Query: 94  PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R  +K+   C  +C +C     R  +       VL      AA  Y  ++  +  +  
Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPLARGRIRSRSPKDVLKEVRGLAASGY--QEVVLNGIHL 199

Query: 150 TGGDPLILSHKR-----------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198
           +    +   +++           L ++++ +  ++ ++ +R  S    ++P+ ++    +
Sbjct: 200 SSY-GMTSYNRQVASEEMAGGGHLMELVEAVAGVEGIRRIRLGS----MEPRLVDRAFAE 254

Query: 199 CLKEAGKPVYIAIHA 213
            L    K   I  H 
Sbjct: 255 RLARVEK---ICPHF 266


>gi|183982863|ref|YP_001851154.1| oxidoreductase [Mycobacterium marinum M]
 gi|183176189|gb|ACC41299.1| conserved hypothetical oxidoreductase [Mycobacterium marinum M]
          Length = 389

 Score = 36.6 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 23/167 (13%), Positives = 60/167 (35%), Gaps = 39/167 (23%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW----------EV 147
           ++K   +C + C++C+  E +     T +S      AL  I++ + +           ++
Sbjct: 4   VIKTSKLCNLRCKYCYEWEHLSD--PTRMSESVWRDALVAIRDYADLTTRRCGYDIPVDI 61

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHV---------QILR--FHSRVPIVDPQRINPEL 196
           I+ GG+P +L     ++  + +  ++           + +R    + +       +  E 
Sbjct: 62  IWHGGEPTLLP----REYFERVFALQREVFPSDWLQSRRVRNVLQTNL-----YSVRDEH 112

Query: 197 IQCLKEAGKPVYIAIHANHPYEFS-------EEAIAAISRLANAGII 236
           +    E    + I++        +           + I RL + G+ 
Sbjct: 113 LDVFAEHDVELGISVDFAEGVRLTAGGKRTEAAVRSNIRRLQDRGLP 159


>gi|166710944|ref|ZP_02242151.1| molybdenum cofactor biosynthesis protein A [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 343

 Score = 36.6 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 15/114 (13%)

Query: 69  ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGT 124
            LP     P+ D +  PL+ +         L ++  C   C +C   + V    G     
Sbjct: 5   PLPNLATAPMQDRDGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGFDSRQ 56

Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            LS    E  +        + +V  TGG+PL+     L  ++  L  I+ ++ L
Sbjct: 57  RLSFDQLETLVRAFVS-VGVAKVRLTGGEPLLRRD--LPSLIARLTAIEGIEDL 107


>gi|160885195|ref|ZP_02066198.1| hypothetical protein BACOVA_03193 [Bacteroides ovatus ATCC 8483]
 gi|156109545|gb|EDO11290.1| hypothetical protein BACOVA_03193 [Bacteroides ovatus ATCC 8483]
          Length = 439

 Score = 36.6 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 17/125 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151
             R  LK+   C  +C +C      G  +   ++S  + T  A A         E++ TG
Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASMVEQTRQAAA-----EGGKEIVLTG 202

Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
              GD    + +    ++K L  +  ++  R  S    ++P  +  E+I+ +  +     
Sbjct: 203 VNIGDFGKTTGESFFDLVKALDQVDGIERYRISS----IEPNLLTDEIIEFVSHSR---S 255

Query: 209 IAIHA 213
              H 
Sbjct: 256 FMPHF 260


>gi|241663687|ref|YP_002982047.1| pyrroloquinoline quinone biosynthesis protein PqqE [Ralstonia
           pickettii 12D]
 gi|240865714|gb|ACS63375.1| coenzyme PQQ biosynthesis protein E [Ralstonia pickettii 12D]
          Length = 400

 Score = 36.6 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 12/108 (11%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           LN       D +     +P+ G     P  +L +L + CP++C FC    +  ++    L
Sbjct: 3   LNAAGSFEADSLLAPAATPMPGP----PLWLLAELTYRCPLHCAFCS-NPVDYTRHDQEL 57

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
           +++         +    + ++  +GG+PL+         L+TL    H
Sbjct: 58  TTEQWCDVFTQARALGAV-QLGLSGGEPLLRKD------LETLVAHAH 98


>gi|108756838|ref|YP_631100.1| radical SAM domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108460718|gb|ABF85903.1| radical SAM domain protein [Myxococcus xanthus DK 1622]
          Length = 294

 Score = 36.6 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 54/140 (38%), Gaps = 18/140 (12%)

Query: 101 LLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF--TGGDPLIL 157
            L  C   C +C F +    + +       D E  +A+++ ++Q    +F    G+ LI 
Sbjct: 10  PLSSCNYGCEYCPFGKWK-HTDEELAKDRADLERFVAWVEARTQDTVSVFFTPWGEALIW 68

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217
              +  + L  L ++ HV+ L   + +          + +  ++     ++   H     
Sbjct: 69  PWYQ--EALARLSHLPHVERLAIQTNLSCKL------DWVAGVRADKLGIWATYH----P 116

Query: 218 EFS--EEAIAAISRLANAGI 235
           E++     +A  ++L   G+
Sbjct: 117 EWTKRHRFVAQCAKLTELGV 136


>gi|86750500|ref|YP_486996.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
           palustris HaA2]
 gi|86573528|gb|ABD08085.1| GTP cyclohydrolase subunit MoaA [Rhodopseudomonas palustris HaA2]
          Length = 345

 Score = 36.6 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 67/174 (38%), Gaps = 41/174 (23%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C   +M    +  +L+ ++ +   +    +  + ++  TGG+PL+  
Sbjct: 30  VSITDRCDFRCAYCMSEDMTFLPRADLLTLEELDRLCSAFIVR-GVRKLRLTGGEPLV-- 86

Query: 159 HKRLQKVLKTLRYIKHV---------------QILRF-------HSRVPIVDPQRINPEL 196
            + +  ++++L    H+               Q+ RF         R   V    ++P  
Sbjct: 87  RRNMMSLVRSLSR--HLDTGALRELTLTTNGSQLARFAAELRDCGVRRINVSLDTLDPAK 144

Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
            + +   G             EF    IA I     AG+ +   +V+LKG+N+D
Sbjct: 145 FRAITRWG-------------EFDR-VIAGIEAARAAGLAVKINAVVLKGVNED 184


>gi|313201322|ref|YP_004039980.1| coenzyme pqq biosynthesis protein e [Methylovorus sp. MP688]
 gi|312440638|gb|ADQ84744.1| coenzyme PQQ biosynthesis protein E [Methylovorus sp. MP688]
          Length = 394

 Score = 36.6 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 38/76 (50%), Gaps = 3/76 (3%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L ++ + CP++C FC+            L+++    AL   ++   + ++  +GG+PL+
Sbjct: 20  LLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARKMGAL-QLGISGGEPLL 78

Query: 157 LSHKRLQKVLKTLRYI 172
                ++ +++  R +
Sbjct: 79  RDD--IEDIVREARQL 92


>gi|253999234|ref|YP_003051297.1| pyrroloquinoline quinone biosynthesis protein PqqE [Methylovorus
           sp. SIP3-4]
 gi|253985913|gb|ACT50770.1| coenzyme PQQ biosynthesis protein E [Methylovorus sp. SIP3-4]
          Length = 395

 Score = 36.6 bits (84), Expect = 5.9,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 38/76 (50%), Gaps = 3/76 (3%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L ++ + CP++C FC+            L+++    AL   ++   + ++  +GG+PL+
Sbjct: 21  LLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARKMGAL-QLGISGGEPLL 79

Query: 157 LSHKRLQKVLKTLRYI 172
                ++ +++  R +
Sbjct: 80  RDD--IEDIVREARQL 93


>gi|254168775|ref|ZP_04875616.1| probable molybdenum cofactor biosynthesis protein A
           [Aciduliprofundum boonei T469]
 gi|197622212|gb|EDY34786.1| probable molybdenum cofactor biosynthesis protein A
           [Aciduliprofundum boonei T469]
          Length = 300

 Score = 36.6 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 8/64 (12%)

Query: 99  LKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           + +   C + C +C R            + ++  + E  L  I  +  I +V FTGG+PL
Sbjct: 6   VSVTERCNLNCFYCHREGEWHR----HHSEMTPDEIERILK-IARELDIRKVKFTGGEPL 60

Query: 156 ILSH 159
             + 
Sbjct: 61  CRND 64


>gi|170077243|ref|YP_001733881.1| tRNA modifying enzyme MiaB-like protein [Synechococcus sp. PCC
           7002]
 gi|238066620|sp|B1XPZ7|RIMO_SYNP2 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|169884912|gb|ACA98625.1| tRNA modifying enzyme MiaB-like protein [Synechococcus sp. PCC
           7002]
          Length = 439

 Score = 36.6 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 23/149 (15%)

Query: 92  RYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVL------SSKDTEAALAYIQEK 141
           RY         L++   C   C FC    + G Q+   +      + +  E  +  I   
Sbjct: 137 RYRTTNEAVAYLRVAEGCDYRCAFCIIPHLRGDQRSRPIESIVAEAKQLAEQGVQEIILI 196

Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201
           SQI      G D  I    +L ++L+ L  +  V  +R H   P        PE+I  ++
Sbjct: 197 SQITTNY--GKD--IYGKPKLAELLRALGGVD-VPWIRIHYAYPTGL----TPEVIAAMR 247

Query: 202 EAGKPV-YIAIHANHPYEFSEEAIAAISR 229
           +    + Y+ +   H +    + + A++R
Sbjct: 248 DTPNVIPYLDLPLQHSH---PDILRAMNR 273


>gi|145590325|ref|YP_001152327.1| putative molybdenum cofactor biosynthesis protein A [Pyrobaculum
           arsenaticum DSM 13514]
 gi|145282093|gb|ABP49675.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum arsenaticum DSM 13514]
          Length = 310

 Score = 36.6 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 82/216 (37%), Gaps = 30/216 (13%)

Query: 101 LLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           +   C   C FC      G   ++G+ L+++D     ++ +    + +   TGG+PL+  
Sbjct: 17  VNDECNYNCVFC---HFEGQLRRQGSYLTAEDYGFVSSFFRS-LGVADFKITGGEPLLRR 72

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPY 217
              +  ++  +            + V +     +    +  L++AG   + +++H   P 
Sbjct: 73  D--IDLIVANVAKT--------GAYVTVTTNGYLLRGWVDKLRKAGVARLNVSVHTTDPE 122

Query: 218 E----------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           +             E +  ++   + G+ L    V+L+ IN D + +  L++    L   
Sbjct: 123 KYAKITSTSPAVFREVMRGLAEARDRGLSLKLNVVVLRDINTDRQSVKELVKLAARLGAS 182

Query: 268 PYYLHHPDLAAGTSHFR---LTIEEGQKIVASLKEK 300
             ++      +GT  F      IE   +IV  L  +
Sbjct: 183 LQFIELMPTGSGTKIFDNLFEPIESIVEIVTQLGGR 218


>gi|148555801|ref|YP_001263383.1| beta-ketothiolase [Sphingomonas wittichii RW1]
 gi|148500991|gb|ABQ69245.1| acetyl-CoA acetyltransferase [Sphingomonas wittichii RW1]
          Length = 393

 Score = 36.6 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 9/89 (10%)

Query: 146 EVIFTGGDPLIL--SHKRLQKVLKTLRYIKHV-QILRFHSRVPIVDPQRINPELIQCLKE 202
           E I TG   ++L  S   L    + +  + HV +  R+ +++  V+   +   LI+ L +
Sbjct: 94  EAIVTGAKAMVLGESDIVLAGGAEVMSRVPHVVKGARWGTKMGNVE---MTDGLIEALSD 150

Query: 203 AGKPVYIAIHANHPYE---FSEEAIAAIS 228
               V++ I A +  E    + EA  A++
Sbjct: 151 PFDKVHMGITAENVAERYQITREAQDALA 179


>gi|148259214|ref|YP_001233341.1| radical SAM domain-containing protein [Acidiphilium cryptum JF-5]
 gi|146400895|gb|ABQ29422.1| Radical SAM domain protein [Acidiphilium cryptum JF-5]
          Length = 579

 Score = 36.6 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 17/136 (12%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGD 153
           + +      +C + C  C+      + +   L        L    +   ++ E+  TGG+
Sbjct: 299 ETLWFNTGTLCNLACEGCYIESSPRNDRLAWLRLDGFRRVLDEAADRHPELREIGLTGGE 358

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI----VDPQRINPELIQCLKEAGKPVYI 209
           P +         ++ L  +   +      RV +    + P R    +       G+ +++
Sbjct: 359 PFMNPD------IEALIGMALDR----GYRVLVLTNAMTPMR--HHMAAIAGWRGRDLHL 406

Query: 210 AIHANHPYEFSEEAIA 225
            +  +H  E    A+ 
Sbjct: 407 RVSLDHHTEAGHAALR 422


>gi|308232336|ref|ZP_07415756.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu001]
 gi|308372426|ref|ZP_07428640.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu004]
 gi|308373630|ref|ZP_07433114.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu005]
 gi|308378192|ref|ZP_07481852.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu009]
 gi|308379413|ref|ZP_07486196.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu010]
 gi|308380573|ref|ZP_07490415.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu011]
 gi|308214306|gb|EFO73705.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu001]
 gi|308333330|gb|EFP22181.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu004]
 gi|308336984|gb|EFP25835.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu005]
 gi|308353341|gb|EFP42192.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu009]
 gi|308357175|gb|EFP46026.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu010]
 gi|308361126|gb|EFP49977.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu011]
          Length = 344

 Score = 36.6 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L ++  C + CR+C          +  +LS K+  A +        + +V  TGG+PLI 
Sbjct: 16  LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 74

Query: 158 SHKRLQKVLKTLRY 171
               L ++++TL  
Sbjct: 75  PD--LPEIVRTLSA 86


>gi|164687312|ref|ZP_02211340.1| hypothetical protein CLOBAR_00953 [Clostridium bartlettii DSM
           16795]
 gi|164603736|gb|EDQ97201.1| hypothetical protein CLOBAR_00953 [Clostridium bartlettii DSM
           16795]
          Length = 476

 Score = 36.6 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 4/88 (4%)

Query: 91  HRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
             Y +RI+    L L + C   C +C       +     L+  +    +  +Q+      
Sbjct: 79  RFYGNRIVMFAPLYLSNYCVNGCVYCPYHAKNKTIARKKLTQDEIRREVIALQDMGHKRL 138

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH 174
            +  G DP+    + + + + T+  IKH
Sbjct: 139 ALEAGEDPVNNPIEYILECINTIYSIKH 166


>gi|52080450|ref|YP_079241.1| coenzyme PQQ synthesis protein, putative [Bacillus licheniformis
           ATCC 14580]
 gi|52785831|ref|YP_091660.1| moaA/nifB/pqqE family protein [Bacillus licheniformis ATCC 14580]
 gi|319645590|ref|ZP_07999822.1| MoaA/nifB/pqqE family protein [Bacillus sp. BT1B_CT2]
 gi|52003661|gb|AAU23603.1| Coenzyme PQQ synthesis protein, putative [Bacillus licheniformis
           ATCC 14580]
 gi|52348333|gb|AAU40967.1| moaA / nifB / pqqE family [Bacillus licheniformis ATCC 14580]
 gi|317392476|gb|EFV73271.1| MoaA/nifB/pqqE family protein [Bacillus sp. BT1B_CT2]
          Length = 367

 Score = 36.6 bits (84), Expect = 6.0,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 20/180 (11%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           + P  ++ +L   C + C  C        +    LS K+ +  +  I        ++ TG
Sbjct: 8   KSPFIVIWELTRACELKCLHCRASAQ-NKRDPRELSLKEGKDLIDQIHAMDNPL-LVLTG 65

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--- 208
           GDPL +       +++        + +R  S  P   P  +  E IQ  KE G   +   
Sbjct: 66  GDPL-MRDDVFA-IIEYAVQ----KGVRV-SMTPSATPN-VTREAIQSAKEIGLSRWAFS 117

Query: 209 -------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
                  I  H        +  + AI  +    + L   +V+     D  + +A L++  
Sbjct: 118 LDGPTREIHDHFRGTDGSFDLTMKAIRYIHECQLPLQINTVISSYNIDYLDEMAKLIKEL 177


>gi|237709650|ref|ZP_04540131.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 9_1_42FAA]
 gi|229456286|gb|EEO62007.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 9_1_42FAA]
          Length = 472

 Score = 36.6 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 89  IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           I H+ Y +RI+    L L + C   C +C       +     L+ ++    +  +Q+   
Sbjct: 75  IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
               +  G DPL    + + + ++T+  IKH
Sbjct: 135 KRLALEAGEDPLRNPIEYILESIRTIYSIKH 165


>gi|254168706|ref|ZP_04875548.1| probable molybdenum cofactor biosynthesis protein A
           [Aciduliprofundum boonei T469]
 gi|197622332|gb|EDY34905.1| probable molybdenum cofactor biosynthesis protein A
           [Aciduliprofundum boonei T469]
          Length = 300

 Score = 36.6 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 8/64 (12%)

Query: 99  LKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           + +   C + C +C R            + ++  + E  L  I  +  I +V FTGG+PL
Sbjct: 6   VSVTERCNLNCFYCHREGEWHR----HHSEMTPDEIERILK-IARELDIRKVKFTGGEPL 60

Query: 156 ILSH 159
             + 
Sbjct: 61  CRND 64


>gi|144899591|emb|CAM76455.1| Fe-S oxidoreductase [Magnetospirillum gryphiswaldense MSR-1]
          Length = 291

 Score = 36.6 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 12/91 (13%)

Query: 95  DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK----SQIWEVIF 149
           D ++++    C    C FC     V   +      +D +A    I            V  
Sbjct: 16  DNLIIQATLGCRFNGCTFCS-MYKVKEYRA-----RDLDAVYDDIAAAALAWPDAHRVFL 69

Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILR 179
             GD   L    L  +   L     ++Q + 
Sbjct: 70  ADGDAYNLPTDHLAAICDRLAATFPNLQRVT 100


>gi|297617643|ref|YP_003702802.1| hypothetical protein Slip_1474 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145480|gb|ADI02237.1| protein of unknown function DUF512 [Syntrophothermus lipocalidus
           DSM 12680]
          Length = 454

 Score = 36.6 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 58/186 (31%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +   L  C   C FCF  ++    + ++ +  D                          
Sbjct: 86  AVFDRLRTCRNRCLFCFMDQLPSGVRKSLRTKDD-------------------------- 119

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
               RL  +      + ++               R + E I  L+ +  P+Y+++HA   
Sbjct: 120 --DYRLSFLYGNFITLTNL--------------DREDWEAIAALRLS--PLYVSVHATDS 161

Query: 217 Y--------EFSEEAIAAISRLANAGIILLSQSVLLKGIND------DPEILANLMRTFV 262
                    E   + I+ ++RL + G+ + +Q VL  GIND          LA+   T +
Sbjct: 162 RVRACMLGNEKGGQIISDLNRLRDLGLQVHTQVVLCPGINDGEVLAETVSTLASFWPTVL 221

Query: 263 ELRIKP 268
            + I P
Sbjct: 222 SIGIVP 227


>gi|289549019|ref|YP_003474007.1| RNA modification enzyme, MiaB family [Thermocrinis albus DSM 14484]
 gi|289182636|gb|ADC89880.1| RNA modification enzyme, MiaB family [Thermocrinis albus DSM 14484]
          Length = 437

 Score = 36.6 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 8/100 (8%)

Query: 97  ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
             + ++  C  +C +C     R         ++L       A    +       V   G 
Sbjct: 148 AYVTVMKGCDKHCTYCVVPKTRGRQRSRSLESILEEVRWLVADGVKEIHLLGQNVTAWGQ 207

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192
           D     +    ++L  +  I  V+ +RF +  P    +RI
Sbjct: 208 DI----NIHFSELLYRVAEIPGVERIRFTTGHPSDMDERI 243


>gi|189425324|ref|YP_001952501.1| radical SAM protein [Geobacter lovleyi SZ]
 gi|189421583|gb|ACD95981.1| Radical SAM domain protein [Geobacter lovleyi SZ]
          Length = 293

 Score = 36.6 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 15/93 (16%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVIFT 150
           ++ ++   C    CRFC      G  KG     +  E  LA I E        +  V   
Sbjct: 18  LIFQITVGCSQNQCRFC------GMYKGKQFHLRPVEEILAEITELPSTYRTRVERVFLA 71

Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHS 182
            GD L+   + L  +L  L      +   R  S
Sbjct: 72  DGDALVYPFEGLVTILDALASTFPGLT--RIGS 102


>gi|238894848|ref|YP_002919582.1| pyrroloquinoline quinone biosynthesis protein PqqE [Klebsiella
           pneumoniae NTUH-K2044]
 gi|130802|sp|P27507|PQQE_KLEPN RecName: Full=Coenzyme PQQ synthesis protein E; AltName:
           Full=Pyrroloquinoline quinone biosynthesis protein E
 gi|809708|emb|CAA41583.1| pqqE [Klebsiella pneumoniae]
 gi|238547164|dbj|BAH63515.1| pyrroloquinoline quinone synthesis protein E [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
          Length = 380

 Score = 36.6 bits (84), Expect = 6.1,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 31/180 (17%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L +L + CP+ C +C    +  +++   L+++         +    + ++ F+GG+PL 
Sbjct: 14  LLAELTYRCPLQCPYCS-NPLDFARQDKELTTEQWIEVFRQARAMGSV-QLGFSGGEPLT 71

Query: 157 LSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
                L ++++  R +    ++                +    +    EAG   +I I  
Sbjct: 72  RKD--LPELIRAARDLGFYTNLITSGIG----------LTESKLDAFSEAGLD-HIQISF 118

Query: 214 NHPYEFSEEAIA----------AISRLANAG--IILLSQSVLLKGINDDPEILANLMRTF 261
               E    A+A          A+++   A    ++L+  VL +   D  + +  L    
Sbjct: 119 QASDEVLNAALAGNKKAFQQKLAMAKAVKARDYPMVLN-FVLHRHNIDQLDKIIELCIEL 177


>gi|265754282|ref|ZP_06089471.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_33FAA]
 gi|263234991|gb|EEZ20546.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_33FAA]
          Length = 472

 Score = 36.6 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 89  IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           I H+ Y +RI+    L L + C   C +C       +     L+ ++    +  +Q+   
Sbjct: 75  IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
               +  G DPL    + + + ++T+  IKH
Sbjct: 135 KRLALEAGEDPLRNPIEYILESIRTIYSIKH 165


>gi|262044465|ref|ZP_06017524.1| coenzyme PQQ synthesis protein E [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038195|gb|EEW39407.1| coenzyme PQQ synthesis protein E [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 380

 Score = 36.6 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 31/180 (17%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +L +L + CP+ C +C    +  +++   L+++         +    + ++ F+GG+PL 
Sbjct: 14  LLAELTYRCPLQCPYCS-NPLDFARQDKELTTEQWIEVFRQARAMGSV-QLGFSGGEPLT 71

Query: 157 LSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213
                L ++++  R +    ++                +    +    EAG   +I I  
Sbjct: 72  RKD--LPELIRAARDLGFYTNLITSGIG----------LTESKLDAFSEAGLD-HIQISF 118

Query: 214 NHPYEFSEEAIA----------AISRLANAG--IILLSQSVLLKGINDDPEILANLMRTF 261
               E    A+A          A+++   A    ++L+  VL +   D  + +  L    
Sbjct: 119 QASDEVLNAALAGNKKAFQQKLAMAKAVKARDYPMVLN-FVLHRHNIDQLDKIIELCIEL 177


>gi|212639043|ref|YP_002315563.1| Radical SAM superfamily enzyme [Anoxybacillus flavithermus WK1]
 gi|212560523|gb|ACJ33578.1| Radical SAM superfamily enzyme [Anoxybacillus flavithermus WK1]
          Length = 380

 Score = 36.6 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 32/197 (16%), Positives = 59/197 (29%), Gaps = 27/197 (13%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGG 152
           P  ++ ++   C + C  C            +   +        Y      +   +FTGG
Sbjct: 14  PFIVIWEVTRACQLKCVHCRADAQPFPDPRELTYEEGLRLIDDIYDMNNPML---VFTGG 70

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208
           D ++     L  + +    IK    +      P   P  +  E ++  KE G   +    
Sbjct: 71  DCMMRED--LFDLAE--YAIKKGMRVSI---TPSATPN-VTKEKMKKAKEIGLSRWAFSL 122

Query: 209 ------IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
                 I       P  F    I  I  L    + L   +V+ +   D  E +A L+   
Sbjct: 123 DGPTADIHDRFRGTPSSFD-LTIENIRYLNELHMPLQINTVISRYNYDHLEQMAKLVAEL 181

Query: 262 VELRIKPYYLHHPDLAA 278
             +    +Y+       
Sbjct: 182 KAVM---WYIFLLVPTG 195


>gi|124514476|gb|EAY55989.1| conserved protein of unknown function [Leptospirillum rubarum]
          Length = 462

 Score = 36.6 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)

Query: 198 QCLKEAGKPVYIAIHANHP--------YEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249
           + L +   P+YI++HA  P         E + + +  I  L   GI L +Q V+  GIND
Sbjct: 136 RILDQRLSPLYISVHATDPAVRKRLLRNERAPDILDRIDHLIAGGIRLHTQIVITPGIND 195


>gi|331086912|ref|ZP_08335989.1| hypothetical protein HMPREF0987_02292 [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|330410078|gb|EGG89513.1| hypothetical protein HMPREF0987_02292 [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 484

 Score = 36.6 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 19/114 (16%)

Query: 96  RILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
            + L +   C ++C+ C+       V   K    + K  +A   Y+         I +GG
Sbjct: 103 TVTLNITDKCNLFCKHCYIGASSRKVQFMK-LQDAKKVVDAIWPYM--NPS-CSFIVSGG 158

Query: 153 DPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
           + L+     + L+ +         + ++   +         I PEL   L +  
Sbjct: 159 EALLNPDCIEILEYITSR--GKGKINLVTNGT--------TITPELADKLSKIR 202


>gi|264677776|ref|YP_003277682.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
           CNB-2]
 gi|262208288|gb|ACY32386.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni
           CNB-2]
          Length = 342

 Score = 36.6 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 32/79 (40%), Gaps = 8/79 (10%)

Query: 99  LKLLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           + +   C   C +C  +E+           ++LS ++             + ++  TGG+
Sbjct: 6   ISVTDRCNFRCNYCMPKEVFDKNYQYLPHSSLLSFEEITRLARLFVAH-GVRKLRLTGGE 64

Query: 154 PLILSHKRLQKVLKTLRYI 172
           PL+   K ++ ++  L  +
Sbjct: 65  PLL--RKNIEALIAQLAEL 81


>gi|209549618|ref|YP_002281535.1| molybdenum cofactor biosynthesis protein A [Rhizobium leguminosarum
           bv. trifolii WSM2304]
 gi|226707377|sp|B5ZRM8|MOAA_RHILW RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|209535374|gb|ACI55309.1| molybdenum cofactor biosynthesis protein A [Rhizobium leguminosarum
           bv. trifolii WSM2304]
          Length = 348

 Score = 36.6 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 38/178 (21%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +       + ++  TGG+PL+  
Sbjct: 34  VSVTDRCDFRCTYCMAENMTFLPKKDLLTLEELDRLCSAFVA-KGVKKIRLTGGEPLV-- 90

Query: 159 HKRLQKVLKTL-----RYIKHVQILRFHS--------------RVPIVDPQRINPELIQC 199
            K +  +++ L       +  V +    S              R   V    ++P+  + 
Sbjct: 91  RKNIMYLVRRLGEKIGAGLDEVTLTTNGSQLSRHAEELYDCGVRRINVSLDTLDPDKFRK 150

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILA 255
           +   G    +                 I     AGI +   +V LK  ND   PEI+ 
Sbjct: 151 ITRWGDFAKVM--------------EGIDAAQKAGIKIKLNAVALKDFNDAEMPEIMR 194


>gi|297583665|ref|YP_003699445.1| radical SAM domain-containing protein [Bacillus selenitireducens
           MLS10]
 gi|297142122|gb|ADH98879.1| Radical SAM domain protein [Bacillus selenitireducens MLS10]
          Length = 368

 Score = 36.6 bits (84), Expect = 6.2,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 8/87 (9%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
            ++C  YCRFC       ++ G VL  +D       IQE   +   E++  GG      +
Sbjct: 61  TNLCDTYCRFCAFYRPPNAKDGYVLDDEDIYQK---IQETKDVGGTEILMQGG---TNPN 114

Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPI 186
              +     LR IK    +  HS  P 
Sbjct: 115 LPFEYYTDLLRNIKKRFDITMHSFSPA 141


>gi|329731486|gb|EGG67849.1| YfkB-like domain protein [Staphylococcus aureus subsp. aureus
           21193]
          Length = 383

 Score = 36.6 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 16/110 (14%)

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
           P E  + + ++    L  I             ++C + C  C             +  + 
Sbjct: 16  PWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTVDPEP 62

Query: 131 TEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 63  LDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 111


>gi|206889368|ref|YP_002249102.1| heme biosynthesis (NirJ-2) family protein, putative
           [Thermodesulfovibrio yellowstonii DSM 11347]
 gi|206741306|gb|ACI20363.1| heme biosynthesis (NirJ-2) family protein, putative
           [Thermodesulfovibrio yellowstonii DSM 11347]
          Length = 472

 Score = 36.6 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 70/165 (42%), Gaps = 13/165 (7%)

Query: 14  LYNANLIKKEQIDEIKEISNHYSIALTP-VI---ANLINPHNPNDPIARQFIPQKEELNI 69
           L + +L        + ++  +   +++P       +L++ +   + ++ ++I  + EL  
Sbjct: 7   LNDIHLFSIRDEHFLLDVEGNKIFSISPEAYEIALSLMSGNKSTNKLSLRYIRAERELRK 66

Query: 70  LPEEREDPIGDNNHSPLKGIVHRYP---DRILLKLLHVCPVYCRFCFRR-EMVGSQKGTV 125
           +  +  +P+          ++   P   + + L L H C + C +CF             
Sbjct: 67  I-FDSFEPLNSEEIEHRSKLLEEKPYKLNGLWLGLAHACNLGCSYCFANTPNYLQNHRPF 125

Query: 126 LSSKDTEAALAY-IQEKSQIW--EVIFTGGDPLILSHKRLQKVLK 167
           +S +  + A+ + I +   I   ++IF GG+PL L    LQKV+ 
Sbjct: 126 MSEETAKRAIDFLINQSPDIEEYDIIFFGGEPL-LKFDLLQKVVD 169


>gi|295696361|ref|YP_003589599.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
 gi|295411963|gb|ADG06455.1| Radical SAM domain protein [Bacillus tusciae DSM 2912]
          Length = 359

 Score = 36.6 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159
            +VC  YC FC      G  +  VL     E     I+E  ++   E++  GG       
Sbjct: 66  SNVCDTYCTFCAFYRRPGHPEAYVLPD---EVIFEKIEETVRLGGTEILMQGG---THPD 119

Query: 160 KRLQKVLKTLRYIK 173
             L+   + LR IK
Sbjct: 120 LPLEWYTELLRKIK 133


>gi|15920846|ref|NP_376515.1| hypothetical protein ST0626 [Sulfolobus tokodaii str. 7]
 gi|15621630|dbj|BAB65624.1| 350aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 350

 Score = 36.6 bits (84), Expect = 6.3,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 33/151 (21%)

Query: 98  LLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           L+     C + C +C   F   +V           D +     I++      VIF GG+P
Sbjct: 4   LVLTTGKCNLTCDYCGGSFPSHIVPWGVKY-----DIQKLKNAIEKDQNAT-VIFYGGEP 57

Query: 155 LILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIV--DPQRINPELIQCL---------- 200
           L+       K +  +  + +++  R    +    V   P+R   ++   L          
Sbjct: 58  LMNP-----KFIMQV--MDNIKAKRWGIQTNGVAVKLLPERYWKKMNVALLSIDGREEIT 110

Query: 201 -KEAGKPVY--IAIHANHPYEFSEEAIAAIS 228
            K  GK VY  +  HA +  E   E IA ++
Sbjct: 111 DKHRGKGVYKVVVKHAKYLKELGVETIARMA 141


>gi|328884350|emb|CCA57589.1| 2-oxoglutarate oxidoreductase, beta subunit [Streptomyces
           venezuelae ATCC 10712]
          Length = 353

 Score = 36.6 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 15/119 (12%)

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHS---RVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           +L  K L K  + +  ++H Q +RF +   +  + DP     +L            I IH
Sbjct: 226 VLKDKDLAK--EAVIRLEHGQPIRFGTENDKGVVRDPA--TGDLHVVTVTPENESRILIH 281

Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE--ILANLMRTFVELRIKPY 269
             H    +     A+SRLA+     L Q+ +  G+    E  +   LM   +E  ++ Y
Sbjct: 282 DAHAT--TPTTAFALSRLAD--PDTLHQTPI--GVFRSVERPVYDTLMADQLEAAVERY 334


>gi|258543190|ref|YP_003188623.1| pyrroloquinoline quinone biosynthesis protein PqqE [Acetobacter
           pasteurianus IFO 3283-01]
 gi|256634268|dbj|BAI00244.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
           [Acetobacter pasteurianus IFO 3283-01]
 gi|256637328|dbj|BAI03297.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
           [Acetobacter pasteurianus IFO 3283-03]
 gi|256640380|dbj|BAI06342.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
           [Acetobacter pasteurianus IFO 3283-07]
 gi|256643437|dbj|BAI09392.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
           [Acetobacter pasteurianus IFO 3283-22]
 gi|256646492|dbj|BAI12440.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
           [Acetobacter pasteurianus IFO 3283-26]
 gi|256649545|dbj|BAI15486.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
           [Acetobacter pasteurianus IFO 3283-32]
 gi|256652531|dbj|BAI18465.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
           [Acetobacter pasteurianus IFO 3283-01-42C]
 gi|256655589|dbj|BAI21516.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE
           [Acetobacter pasteurianus IFO 3283-12]
          Length = 364

 Score = 36.6 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 45/265 (16%), Positives = 87/265 (32%), Gaps = 80/265 (30%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P  +L +L H CP+ C +C    +    +   L ++D +  L+    +  + +V F+GG+
Sbjct: 7   PMSLLAELTHRCPLQCPYCS-NPLQLEPRTQELGTEDWKRVLSE-AAEMGVLQVHFSGGE 64

Query: 154 PL--------------------------ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187
           P+                          +L+ K LQ++      + H+Q+          
Sbjct: 65  PMARPDLPELVAHAAKAGLYSNLITSGVLLNAKNLQELADA--GLDHIQL---------- 112

Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247
                         E+   +     A H  +       A   +   G+ L    V+ +  
Sbjct: 113 -------SFQDAEAESADHIAHMTGA-HAKKL-----EAAQLIKTEGLPLTLNFVIHRQN 159

Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF-------------RLTIEEGQKIV 294
            +    +  L       R++          A T ++             R  +EE +K+V
Sbjct: 160 CERVPAMLALAEQLGARRVE---------IAHTQYYGWGLLNRNALLPSRTQVEETEKVV 210

Query: 295 ASLKEKISG-----LCQPFYILDLP 314
           A  + ++SG        P Y  D P
Sbjct: 211 AEARVRLSGRMSIDFVTPDYYADRP 235


>gi|297208902|ref|ZP_06925307.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300913040|ref|ZP_07130478.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus TCH70]
 gi|296886463|gb|EFH25391.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus ATCC 51811]
 gi|300885818|gb|EFK81025.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus TCH70]
          Length = 394

 Score = 36.6 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 16/110 (14%)

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
           P E  + + ++    L  I             ++C + C  C             +  + 
Sbjct: 27  PWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTVDPEP 73

Query: 131 TEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 74  LDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 122


>gi|78355756|ref|YP_387205.1| GTP cyclohydrolase subunit MoaA [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218161|gb|ABB37510.1| GTP cyclohydrolase subunit MoaA [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 353

 Score = 36.6 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 39/254 (15%), Positives = 85/254 (33%), Gaps = 43/254 (16%)

Query: 99  LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L +   C + C +C+  + +      ++L  ++    +        + +V  TGG+P + 
Sbjct: 37  LSVTDRCNLRCMYCWTCDGLSFIPHDSILKYEEMLQLVDA-AVGMGVEKVRLTGGEPFVR 95

Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH-- 215
                  ++++L        +R  +         +    +  L++ G   Y+ I  +   
Sbjct: 96  KDFLF--LVESLVRRHPSLDVRITTNA------TLLAGKVAALRDLGVR-YVNISLDTFE 146

Query: 216 --------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILANLMRTFVELR 265
                     +       A+  +   GI L   +V L+G NDD  P  L    R  V++R
Sbjct: 147 RERFRRVAGRDMLRHVRRALDEVLEHGIGLKLNAVALRGFNDDELPVFLNFARRNAVDVR 206

Query: 266 IKPYYLHHP-DLAAGTSHF-RLTIEEGQKIVASLKEK-----ISGLCQ---PFYILDLPG 315
                         G + + +        I+ + +       + G  +   P  +  + G
Sbjct: 207 ------FIEFMPMGGCTRWSQENFWPASDILETARRHADLTPVEGRSRRSGPARLYSIEG 260

Query: 316 GYGK----VKIDTH 325
           G G+      +  H
Sbjct: 261 GKGRFGLITPLSDH 274


>gi|152986331|ref|YP_001349180.1| molybdenum cofactor biosynthesis protein A [Pseudomonas aeruginosa
           PA7]
 gi|150961489|gb|ABR83514.1| molybdenum cofactor biosynthesis protein A [Pseudomonas aeruginosa
           PA7]
          Length = 331

 Score = 36.6 bits (84), Expect = 6.4,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 3/84 (3%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L +   C   C +C   +M    +  VLS ++  A          +  +  TGG+PL+  
Sbjct: 19  LSVTDRCDFRCTYCMSEDMQFLPRDQVLSLEELYAVADAFIG-LGVRRIRITGGEPLV-- 75

Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182
            K +  +L  L     ++ L   +
Sbjct: 76  RKGIAGLLARLGQRPELEDLAITT 99


>gi|310641170|ref|YP_003945928.1| radical sam domain protein [Paenibacillus polymyxa SC2]
 gi|309246120|gb|ADO55687.1| Radical SAM domain protein [Paenibacillus polymyxa SC2]
          Length = 376

 Score = 36.6 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 18/122 (14%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + + + H+C + C  C   +M+  ++   L     +  L  + E   +  +  TGG+P +
Sbjct: 36  VEMTVTHLCNMRCEHCAVGDMLVMKEAPFLP---LDLMLKRLDEVEHLETISITGGEPAL 92

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----YIAIH 212
           L  K +  V+  L      + +R           +IN  L   ++   K +     + I 
Sbjct: 93  L-DKTVDDVIVPLLKYAKERGIR----------SQINSNLTLDIRRYEKMLPYLDVMHIS 141

Query: 213 AN 214
            N
Sbjct: 142 FN 143


>gi|304410843|ref|ZP_07392460.1| Radical SAM domain protein [Shewanella baltica OS183]
 gi|307304986|ref|ZP_07584736.1| Radical SAM domain protein [Shewanella baltica BA175]
 gi|304350740|gb|EFM15141.1| Radical SAM domain protein [Shewanella baltica OS183]
 gi|306912388|gb|EFN42812.1| Radical SAM domain protein [Shewanella baltica BA175]
          Length = 295

 Score = 36.6 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 2/84 (2%)

Query: 97  ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           ++L++ + C    C FC                K  +  LA  +  + +  V    GD +
Sbjct: 19  LILQVTNGCSWNQCSFCDMYTQPQKAFRAQKLDKVEQDILAVARSGAPVSRVFLADGDAM 78

Query: 156 ILSHKRLQKVLKTL-RYIKHVQIL 178
            L   RL+ + + + R++  V  +
Sbjct: 79  SLPFARLEAICELINRHLPQVTRI 102


>gi|261417330|ref|YP_003251013.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|261373786|gb|ACX76531.1| Radical SAM domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
 gi|302325710|gb|ADL24911.1| radical SAM domain protein [Fibrobacter succinogenes subsp.
           succinogenes S85]
          Length = 224

 Score = 36.6 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +   LH C + C +C     V       +S  +  AA+   + +S +  V  TGG+PLI
Sbjct: 21  AVFVRLHGCNLRCSYCDSMYAVEGPDFKQMSVGEVLAAVEMYRNESGVKCVTLTGGEPLI 80


>gi|169835697|ref|ZP_02868885.1| putative anaerobic ribonucleoside-triphosphate reductase activating
           protein [candidate division TM7 single-cell isolate
           TM7a]
          Length = 157

 Score = 36.6 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 21/60 (35%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C   C  C          G  L+ +  E     I E + +  +  +GGDPL      L+
Sbjct: 25  GCSHACPGCHNEYSWNPNHGNTLTYEILEKIAKEINENTLLDGITISGGDPLFNPIDMLK 84


>gi|149917134|ref|ZP_01905634.1| Radical SAM [Plesiocystis pacifica SIR-1]
 gi|149822050|gb|EDM81443.1| Radical SAM [Plesiocystis pacifica SIR-1]
          Length = 381

 Score = 36.6 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
           P+R++L +   C + C  C   E     + +V    D       +++  ++  +  TGG+
Sbjct: 39  PNRLVLDVTRRCNLRCSMCRTWEDPRRDELSVPEIADI------MRQLPRLTWLDVTGGE 92

Query: 154 PLILSHKR 161
           P +    +
Sbjct: 93  PFLRKDAK 100


>gi|197117748|ref|YP_002138175.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
 gi|197087108|gb|ACH38379.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase
           [Geobacter bemidjiensis Bem]
          Length = 445

 Score = 36.6 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 38/84 (45%), Gaps = 7/84 (8%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151
           YP ++ ++    C + C  C ++   GS +   LS +  +A    +     +  ++  G 
Sbjct: 22  YPSKLFVEATSRCNLNCVMCMKQNSGGSVRDGDLSPEIFQALEPALAN---LDALVLNGV 78

Query: 152 GDPLILSHKRLQKVLKTL-RYIKH 174
           G+PLI  + RL++ +      + +
Sbjct: 79  GEPLI--NTRLEQYISHAKSRMPN 100


>gi|21283546|ref|NP_646634.1| hypothetical protein MW1817 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486695|ref|YP_043916.1| hypothetical protein SAS1799 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|21204987|dbj|BAB95682.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49245138|emb|CAG43604.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MSSA476]
          Length = 383

 Score = 36.6 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 16/110 (14%)

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
           P E  + + ++    L  I             ++C + C  C             +  + 
Sbjct: 16  PWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTVDPEP 62

Query: 131 TEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 63  LDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 111


>gi|15924867|ref|NP_372401.1| hypothetical protein SAV1877 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927451|ref|NP_374984.1| hypothetical protein SA1693 [Staphylococcus aureus subsp. aureus
           N315]
 gi|148268349|ref|YP_001247292.1| YfkB-like domain-containing protein [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394411|ref|YP_001317086.1| YfkB-like domain-containing protein [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156980193|ref|YP_001442452.1| hypothetical protein SAHV_1862 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253314938|ref|ZP_04838151.1| hypothetical protein SauraC_01935 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255006665|ref|ZP_05145266.2| hypothetical protein SauraM_09355 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|258408911|ref|ZP_05681193.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|258430043|ref|ZP_05688413.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|258443439|ref|ZP_05691781.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|258445297|ref|ZP_05693488.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|258447861|ref|ZP_05695995.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|258453294|ref|ZP_05701279.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|269203514|ref|YP_003282783.1| hypothetical protein SAAV_1927 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282894542|ref|ZP_06302770.1| hypothetical protein SGAG_01890 [Staphylococcus aureus A8117]
 gi|282928049|ref|ZP_06335656.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|295407255|ref|ZP_06817054.1| hypothetical protein SMAG_02428 [Staphylococcus aureus A8819]
 gi|296275890|ref|ZP_06858397.1| hypothetical protein SauraMR_06062 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297246218|ref|ZP_06930069.1| hypothetical protein SLAG_02300 [Staphylococcus aureus A8796]
 gi|13701670|dbj|BAB42963.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247649|dbj|BAB58039.1| similar to thioredoxin-like oxidoreductases [Staphylococcus aureus
           subsp. aureus Mu50]
 gi|147741418|gb|ABQ49716.1| YfkB-like domain [Staphylococcus aureus subsp. aureus JH9]
 gi|149946863|gb|ABR52799.1| YfkB-like domain protein [Staphylococcus aureus subsp. aureus JH1]
 gi|156722328|dbj|BAF78745.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|257840358|gb|EEV64820.1| conserved hypothetical protein [Staphylococcus aureus A9763]
 gi|257849637|gb|EEV73605.1| conserved hypothetical protein [Staphylococcus aureus A9299]
 gi|257851324|gb|EEV75264.1| conserved hypothetical protein [Staphylococcus aureus A8115]
 gi|257855815|gb|EEV78739.1| conserved hypothetical protein [Staphylococcus aureus A6300]
 gi|257858793|gb|EEV81662.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|257864502|gb|EEV87245.1| conserved hypothetical protein [Staphylococcus aureus A5937]
 gi|262075804|gb|ACY11777.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282590113|gb|EFB95194.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|282763029|gb|EFC03161.1| hypothetical protein SGAG_01890 [Staphylococcus aureus A8117]
 gi|285817557|gb|ADC38044.1| Hypothetical protein SA2981_1833 [Staphylococcus aureus 04-02981]
 gi|294967830|gb|EFG43860.1| hypothetical protein SMAG_02428 [Staphylococcus aureus A8819]
 gi|297176925|gb|EFH36182.1| hypothetical protein SLAG_02300 [Staphylococcus aureus A8796]
 gi|312830249|emb|CBX35091.1| radical SAM superfamily protein [Staphylococcus aureus subsp.
           aureus ECT-R 2]
 gi|315129317|gb|EFT85311.1| hypothetical protein CGSSa03_08645 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329724779|gb|EGG61283.1| YfkB-like domain protein [Staphylococcus aureus subsp. aureus
           21172]
          Length = 383

 Score = 36.6 bits (84), Expect = 6.5,   Method: Composition-based stats.
 Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 16/110 (14%)

Query: 71  PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
           P E  + + ++    L  I             ++C + C  C             +  + 
Sbjct: 16  PWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTVDPEP 62

Query: 131 TEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 63  LDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 111


>gi|282600001|ref|ZP_05972682.2| putative pyruvate formate-lyase activating enzyme [Providencia
           rustigianii DSM 4541]
 gi|282566719|gb|EFB72254.1| putative pyruvate formate-lyase activating enzyme [Providencia
           rustigianii DSM 4541]
          Length = 317

 Score = 36.6 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 11/61 (18%)

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILA-------NLMRT--FVELRIKPYYLHH 273
                 RL   G  ++ +  L++G ND  + +         L +      + I PY  H 
Sbjct: 215 VRRNFERLMELGANVVMRMPLVRGCNDSFDAITGAIEYAMELSKRGNLNRIDILPY--HQ 272

Query: 274 P 274
            
Sbjct: 273 L 273


>gi|212690607|ref|ZP_03298735.1| hypothetical protein BACDOR_00093 [Bacteroides dorei DSM 17855]
 gi|212666853|gb|EEB27425.1| hypothetical protein BACDOR_00093 [Bacteroides dorei DSM 17855]
          Length = 472

 Score = 36.6 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 89  IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           I H+ Y +RI+    L L + C   C +C       +     L+ ++    +  +Q+   
Sbjct: 75  IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
               +  G DPL    + + + ++T+  IKH
Sbjct: 135 KRLALEAGEDPLRNPIEYILESIRTIYSIKH 165


>gi|73662225|ref|YP_301006.1| hypothetical protein SSP0916 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494740|dbj|BAE18061.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 379

 Score = 36.6 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 12/112 (10%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++  P E  + + +++   L  I             ++C + C  C     + +     L
Sbjct: 15  IHNDPWEAYNDMQEHDRLTLSNIE--------FTTTNLCNMRCSHCAVGYTLQTTDPDPL 66

Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
                   L  I     +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 67  PMDLIYRRLDEI---PDLKTMSITGGEP-MFSKKSIRNVVKPLLKYAHSRGI 114


>gi|49484118|ref|YP_041342.1| hypothetical protein SAR1967 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257426009|ref|ZP_05602431.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257428682|ref|ZP_05605077.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431292|ref|ZP_05607668.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257434010|ref|ZP_05610361.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257436914|ref|ZP_05612956.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282906280|ref|ZP_06314132.1| radical SAM superfamily domain-containing protein [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|282909196|ref|ZP_06317012.1| radical SAM superfamily domain-containing protein [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282911502|ref|ZP_06319302.1| radical SAM superfamily domain-containing protein [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282914674|ref|ZP_06322459.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus M899]
 gi|282925115|ref|ZP_06332775.1| hypothetical protein SARG_02404 [Staphylococcus aureus subsp.
           aureus C101]
 gi|283958638|ref|ZP_06376084.1| radical SAM superfamily domain-containing protein [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|293507751|ref|ZP_06667593.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293510769|ref|ZP_06669471.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M809]
 gi|293539308|ref|ZP_06671987.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus M1015]
 gi|295428458|ref|ZP_06821085.1| hypothetical protein SIAG_02227 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|49242247|emb|CAG40954.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257271152|gb|EEV03309.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257274326|gb|EEV05838.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257277941|gb|EEV08597.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257280936|gb|EEV11080.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257283703|gb|EEV13828.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282313073|gb|EFB43471.1| hypothetical protein SARG_02404 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282321388|gb|EFB51714.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus M899]
 gi|282324511|gb|EFB54823.1| radical SAM superfamily domain-containing protein [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282326764|gb|EFB57061.1| radical SAM superfamily domain-containing protein [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282330477|gb|EFB59994.1| radical SAM superfamily domain-containing protein [Staphylococcus
           aureus subsp. aureus Btn1260]
 gi|283789678|gb|EFC28500.1| radical SAM superfamily domain-containing protein [Staphylococcus
           aureus subsp. aureus A017934/97]
 gi|290919843|gb|EFD96912.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291094814|gb|EFE25082.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291466400|gb|EFF08924.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M809]
 gi|295127440|gb|EFG57079.1| hypothetical protein SIAG_02227 [Staphylococcus aureus subsp.
           aureus EMRSA16]
          Length = 383

 Score = 36.6 bits (84), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++  P E  + + ++    L  I             ++C + C  C             +
Sbjct: 12  IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 58

Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +  +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 59  DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 111


>gi|237725196|ref|ZP_04555677.1| thiamine biosynthesis protein ThiH [Bacteroides sp. D4]
 gi|229436462|gb|EEO46539.1| thiamine biosynthesis protein ThiH [Bacteroides dorei 5_1_36/D4]
          Length = 472

 Score = 36.2 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 89  IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           I H+ Y +RI+    L L + C   C +C       +     L+ ++    +  +Q+   
Sbjct: 75  IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
               +  G DPL    + + + ++T+  IKH
Sbjct: 135 KRLALEAGEDPLRNPIEYILESIRTIYSIKH 165


>gi|312437658|gb|ADQ76729.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus TCH60]
          Length = 394

 Score = 36.2 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++  P E  + + ++    L  I             ++C + C  C             +
Sbjct: 23  IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 69

Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +  +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 70  DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 122


>gi|150002946|ref|YP_001297690.1| thiamine biosynthesis protein ThiH [Bacteroides vulgatus ATCC 8482]
 gi|254884684|ref|ZP_05257394.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 4_3_47FAA]
 gi|294776606|ref|ZP_06742075.1| thiazole biosynthesis protein ThiH [Bacteroides vulgatus PC510]
 gi|319642353|ref|ZP_07997008.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_40A]
 gi|149931370|gb|ABR38068.1| thiamine biosynthesis protein ThiH [Bacteroides vulgatus ATCC 8482]
 gi|254837477|gb|EET17786.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 4_3_47FAA]
 gi|294449521|gb|EFG18052.1| thiazole biosynthesis protein ThiH [Bacteroides vulgatus PC510]
 gi|317386013|gb|EFV66937.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_40A]
          Length = 472

 Score = 36.2 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%)

Query: 89  IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143
           I H+ Y +RI+    L L + C   C +C       +     L+ ++    +  +Q+   
Sbjct: 75  IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
               +  G DPL    + + + ++T+  IKH
Sbjct: 135 KRLALEAGEDPLRNPIEYILESIQTIYSIKH 165


>gi|21674976|ref|NP_663041.1| translation initiation factor IF-1 [Chlorobium tepidum TLS]
 gi|193211873|ref|YP_001997826.1| translation initiation factor IF-1 [Chlorobaculum parvum NCIB 8327]
 gi|25008603|sp|Q8KAJ3|IF1_CHLTE RecName: Full=Translation initiation factor IF-1
 gi|21648209|gb|AAM73383.1| translation initiation factor IF-1 [Chlorobium tepidum TLS]
 gi|193085350|gb|ACF10626.1| translation initiation factor IF-1 [Chlorobaculum parvum NCIB 8327]
          Length = 72

 Score = 36.2 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329
             + FR+ +E G +    +   +SG  +  YI  LPG   KV+I  +++ K
Sbjct: 18  PNAQFRVKLENGLE----VLAHVSGKIRMHYIRILPGDKVKVQISPYDLSK 64


>gi|308369956|ref|ZP_07419659.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu002]
 gi|308325958|gb|EFP14809.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu002]
          Length = 351

 Score = 36.2 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L ++  C + CR+C          +  +LS K+  A +        + +V  TGG+PLI 
Sbjct: 23  LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 81

Query: 158 SHKRLQKVLKTLRY 171
               L ++++TL  
Sbjct: 82  PD--LPEIVRTLSA 93


>gi|304310967|ref|YP_003810565.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium
           HdN1]
 gi|301796700|emb|CBL44912.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium
           HdN1]
          Length = 332

 Score = 36.2 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 33/207 (15%)

Query: 92  RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R    + L +   C   C +C   +M    +  VLS ++ +   A       + ++  TG
Sbjct: 13  RKVTYLRLSVTDRCDFRCVYCMSEQMQFLPRSQVLSLEEMQTIAAVFVG-LGVTKIRLTG 71

Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIA 210
           G+PL+        +++ L  ++ ++ +   +        ++  +L + LKEAG   + I+
Sbjct: 72  GEPLVRKDCV--SLVRGLSELEGLKEITLTTNG-----NQL-AQLAKPLKEAGLGRINIS 123

Query: 211 IHANHPYEFSEEAIAAISR---LAN--AGI----------ILLSQSVLLKGINDDPEILA 255
           +        + E   AI+R   L+   AGI            L+ +V++KG NDD   + 
Sbjct: 124 L-----DSLNPEKFHAITRTGQLSQVLAGIDAAVDAGFDGTKLN-AVIMKGRNDD--EII 175

Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSH 282
            L    V   +   Y+    L  G +H
Sbjct: 176 ALAEYAVSKGVDITYIEEMPLGEGINH 202


>gi|332827435|gb|EGK00187.1| hypothetical protein HMPREF9455_03519 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 342

 Score = 36.2 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 3/68 (4%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
            +L   C + CR+C+   ++ G+Q  +  S       L  +  +  I  +  TGG+P + 
Sbjct: 14  FELTDKCNLACRYCYNIWKIPGAQHQSFNSYNKAIKTLKQVFSQVDIRNITLTGGEPFVA 73

Query: 158 SHKRLQKV 165
             +R++++
Sbjct: 74  --QRIKEI 79


>gi|170732703|ref|YP_001764650.1| alpha/beta hydrolase fold [Burkholderia cenocepacia MC0-3]
 gi|169815945|gb|ACA90528.1| alpha/beta hydrolase fold [Burkholderia cenocepacia MC0-3]
          Length = 589

 Score = 36.2 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 4/54 (7%)

Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG----SYCITDH 340
           Q+++ +   ++ G   P  I+D+  G+G+  +D   +    +G       + D+
Sbjct: 390 QELIGAAIGRLRGHGTPVRIVDIAAGHGRYVLDAIALAAERDGAAPDDITLRDY 443


>gi|329847364|ref|ZP_08262392.1| tRNA-i6A37 thiotransferase enzyme MiaB [Asticcacaulis biprosthecum
           C19]
 gi|328842427|gb|EGF91996.1| tRNA-i6A37 thiotransferase enzyme MiaB [Asticcacaulis biprosthecum
           C19]
          Length = 448

 Score = 36.2 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 18/118 (15%)

Query: 96  RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAA-----LAYIQEKSQIWE 146
              L +   C  +C FC     R          +L      AA     L  + +   +  
Sbjct: 152 TAFLTVQEGCDKFCTFCVVPYTRGAEWSRPVAAILDEAQALAAKGVRELTLLGQN--VNA 209

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
               G D        L K++  L  I  +  LR+ +  P      +  +LI   ++ G
Sbjct: 210 FNGVGSDG---QPSTLAKLMYALADIPGIDRLRYTTSHPND----MGDDLIAAHRDLG 260


>gi|260891523|ref|ZP_05902786.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Leptotrichia hofstadii F0254]
 gi|260858906|gb|EEX73406.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Leptotrichia hofstadii F0254]
          Length = 126

 Score = 36.2 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 23/60 (38%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163
            C   C  C        + G +L+ +  E     I E + +  +  +GGDPL      L+
Sbjct: 43  GCSHSCPGCHNEYSWNPKHGNLLTYEKLEEIAKEINENTLLDGITISGGDPLFNPVDMLK 102


>gi|162148088|ref|YP_001602549.1| hypothetical protein GDI_2305 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209542702|ref|YP_002274931.1| MiaB-like tRNA modifying enzyme [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786665|emb|CAP56248.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209530379|gb|ACI50316.1| MiaB-like tRNA modifying enzyme [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 420

 Score = 36.2 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 17/120 (14%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  +++   C   C FC           +V      E   A +       E++ TG D
Sbjct: 130 RTRAFVEVQQGCDHRCTFCII-PFGRGPSRSVPVGAVVEQVRALVAS--GYREIVLTGVD 186

Query: 154 PLILSH-------KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
             I S          L ++ +  L  +  ++ LR  S    VDP  I+ +L + L + G+
Sbjct: 187 --ITSWGGDLPGRPALGQLCRRVLALVPELERLRLSS----VDPVEIDDDLWRLLAQEGR 240


>gi|57117055|ref|YP_177925.1| molybdenum cofactor biosynthesis protein A [Mycobacterium
           tuberculosis H37Rv]
 gi|121638994|ref|YP_979218.1| putative molybdenum cofactor biosynthesis protein A moaA1
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|148662963|ref|YP_001284486.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
           tuberculosis H37Ra]
 gi|148824301|ref|YP_001289055.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis F11]
 gi|224991486|ref|YP_002646175.1| putative molybdenum cofactor biosynthesis protein A [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253797790|ref|YP_003030791.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis KZN 1435]
 gi|254365737|ref|ZP_04981782.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis str. Haarlem]
 gi|260202251|ref|ZP_05769742.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis T46]
 gi|260206444|ref|ZP_05773935.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis K85]
 gi|289444673|ref|ZP_06434417.1| molybdenum cofactor biosynthesis protein A [Mycobacterium
           tuberculosis T46]
 gi|289553099|ref|ZP_06442309.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis KZN 605]
 gi|289571317|ref|ZP_06451544.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis T17]
 gi|289575821|ref|ZP_06456048.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis K85]
 gi|289746919|ref|ZP_06506297.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
           tuberculosis 02_1987]
 gi|289751785|ref|ZP_06511163.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis T92]
 gi|289755228|ref|ZP_06514606.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
           tuberculosis EAS054]
 gi|289759236|ref|ZP_06518614.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis T85]
 gi|289763289|ref|ZP_06522667.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis GM 1503]
 gi|297635744|ref|ZP_06953524.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis KZN 4207]
 gi|297732742|ref|ZP_06961860.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis KZN R506]
 gi|306804898|ref|ZP_07441566.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu008]
 gi|306809089|ref|ZP_07445757.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu007]
 gi|313660075|ref|ZP_07816955.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis KZN V2475]
 gi|3024133|sp|O05786|MOAA1_MYCTU RecName: Full=Molybdenum cofactor biosynthesis protein A 1
 gi|38490320|emb|CAE55548.1| PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A MOAA1
           [Mycobacterium tuberculosis H37Rv]
 gi|121494642|emb|CAL73123.1| Probable molybdenum cofactor biosynthesis protein A moaA1
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|134151250|gb|EBA43295.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148507115|gb|ABQ74924.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
           tuberculosis H37Ra]
 gi|148722828|gb|ABR07453.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis F11]
 gi|224774601|dbj|BAH27407.1| putative molybdenum cofactor biosynthesis protein A [Mycobacterium
           bovis BCG str. Tokyo 172]
 gi|253319293|gb|ACT23896.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis KZN 1435]
 gi|289417592|gb|EFD14832.1| molybdenum cofactor biosynthesis protein A [Mycobacterium
           tuberculosis T46]
 gi|289437731|gb|EFD20224.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis KZN 605]
 gi|289540252|gb|EFD44830.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis K85]
 gi|289545071|gb|EFD48719.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis T17]
 gi|289687447|gb|EFD54935.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
           tuberculosis 02_1987]
 gi|289692372|gb|EFD59801.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis T92]
 gi|289695815|gb|EFD63244.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium
           tuberculosis EAS054]
 gi|289710795|gb|EFD74811.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis GM 1503]
 gi|289714800|gb|EFD78812.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis T85]
 gi|308344666|gb|EFP33517.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu007]
 gi|308348616|gb|EFP37467.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis SUMu008]
 gi|323718340|gb|EGB27518.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis CDC1551A]
 gi|326902668|gb|EGE49601.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis W-148]
 gi|328457569|gb|AEB02992.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis KZN 4207]
          Length = 359

 Score = 36.2 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L ++  C + CR+C          +  +LS K+  A +        + +V  TGG+PLI 
Sbjct: 31  LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 89

Query: 158 SHKRLQKVLKTLRY 171
               L ++++TL  
Sbjct: 90  PD--LPEIVRTLSA 101


>gi|319892917|ref|YP_004149792.1| hypothetical protein SPSINT_1628 [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162613|gb|ADV06156.1| Hypothetical protein SPSINT_1628 [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 379

 Score = 36.2 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     ++C + C  C     + ++   +L        L  I     +  +  TGG+P +
Sbjct: 33  VEFTTTNLCNMRCSHCAVGYTLQTKDPDILPMSLILQRLDEI---PTLRTISITGGEP-M 88

Query: 157 LSHKRLQKVLKTLRY 171
            S K +++V+K L  
Sbjct: 89  FSKKSIREVVKPLLK 103


>gi|260188145|ref|ZP_05765619.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis CPHL_A]
 gi|289448788|ref|ZP_06438532.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis CPHL_A]
 gi|289421746|gb|EFD18947.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis CPHL_A]
          Length = 359

 Score = 36.2 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L ++  C + CR+C          +  +LS K+  A +        + +V  TGG+PLI 
Sbjct: 31  LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 89

Query: 158 SHKRLQKVLKTLRY 171
               L ++++TL  
Sbjct: 90  PD--LPEIVRTLSA 101


>gi|31794288|ref|NP_856781.1| molybdenum cofactor biosynthesis protein A [Mycobacterium bovis
           AF2122/97]
 gi|59798458|sp|Q7TX84|MOAA1_MYCBO RecName: Full=Molybdenum cofactor biosynthesis protein A 1
 gi|31619883|emb|CAD96823.1| PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A MOAA1
           [Mycobacterium bovis AF2122/97]
          Length = 359

 Score = 36.2 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L ++  C + CR+C          +  +LS K+  A +        + +V  TGG+PLI 
Sbjct: 31  LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 89

Query: 158 SHKRLQKVLKTLRY 171
               L ++++TL  
Sbjct: 90  PD--LPEIVRTLSA 101


>gi|222053130|ref|YP_002535492.1| radical SAM protein [Geobacter sp. FRC-32]
 gi|221562419|gb|ACM18391.1| Radical SAM domain protein [Geobacter sp. FRC-32]
          Length = 359

 Score = 36.2 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 41/221 (18%), Positives = 73/221 (33%), Gaps = 42/221 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152
           P  I  +    C + C  C    ++  S+     ++ + +  L  I + S+   V+ +GG
Sbjct: 7   PKWIAWETTQKCNLKCVHCRCSSDLTSSEGD--FTTDEGKKLLKEIADFSKP-VVVLSGG 63

Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVY-- 208
           +PL+      L     +L             R+    +   +  E+ Q +KEA   +   
Sbjct: 64  EPLMRQDIFELAGYGTSL-----------GLRMCMATNGALVTDEVCQKMKEADIKMVSL 112

Query: 209 ------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
                  A+H N    P  F     AA       G   L  S   K    +   +AN  +
Sbjct: 113 SLDGSTAAVHDNFRQCPGAFDGVVRAA-ELFRKHGQKFLINSSFTK---RNQNDIANTFK 168

Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300
               L    +Y+             +    G++I+  L  K
Sbjct: 169 VAKSLGATAWYMFM----------IVPTGRGEEIMNELISK 199


>gi|134301127|ref|YP_001114623.1| radical SAM domain-containing protein [Desulfotomaculum reducens
           MI-1]
 gi|134053827|gb|ABO51798.1| Radical SAM domain protein [Desulfotomaculum reducens MI-1]
          Length = 450

 Score = 36.2 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 10/98 (10%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
              DP  +       G+V     + L L   H C + C++CF  E        +LS++  
Sbjct: 73  FTTDPHQEGYRPKRDGVV-----KALCLHAAHDCNLRCKYCFAGEGKFGGPSGLLSAETG 127

Query: 132 EAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVL 166
            AA+ ++ + S      E+ F GG+PL L+ K +++++
Sbjct: 128 RAAIDFLIQHSGNRKHVEIDFFGGEPL-LNFKVIKELV 164


>gi|255261246|ref|ZP_05340588.1| phosphate butyryltransferase [Thalassiobium sp. R2A62]
 gi|255103581|gb|EET46255.1| phosphate butyryltransferase [Thalassiobium sp. R2A62]
          Length = 76

 Score = 36.2 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 14/67 (20%)

Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH--ANHPYEFSEEAIAAISR 229
           I  ++ +   S          + +L + LK+  + + +  H  ANHP   +++ +   + 
Sbjct: 3   IPTLKRICIAS----------DADLTRTLKKLDQKIMLVTHGDANHPKHINKDTVK--TA 50

Query: 230 LANAGII 236
           LA  G  
Sbjct: 51  LAAHGWT 57


>gi|224024935|ref|ZP_03643301.1| hypothetical protein BACCOPRO_01666 [Bacteroides coprophilus DSM
           18228]
 gi|224018171|gb|EEF76169.1| hypothetical protein BACCOPRO_01666 [Bacteroides coprophilus DSM
           18228]
          Length = 432

 Score = 36.2 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 20/116 (17%)

Query: 97  ILLKLLHVCPVYCRFCFR----REMVGSQKGTVLSSKDTE-----AALAYIQEKSQIWEV 147
             LK+   C   C +C         V      +L                I +     E+
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPMEEILDEVRLLVSQGVKEFQVIAQ-----EL 192

Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
            + G D  +   + L ++++ +  I  V+ +R H   P   P+    +L + ++E 
Sbjct: 193 TYYGVD--LYKKQMLPELIEKMAEIPGVEWIRLHYAYPAAFPE----DLFRVMREH 242


>gi|149069513|gb|EDM18954.1| molybdenum cofactor synthesis 1 (predicted), isoform CRA_c [Rattus
           norvegicus]
          Length = 636

 Score = 36.2 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G  H Y   + + L   C + CR+C   E V  + K  +L++++    LA +  K  + +
Sbjct: 66  GRQHSY---LRISLTEKCNLRCRYCMPEEGVSLTPKADLLTTEEILT-LARLFVKEGVDK 121

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           +  TGG+PLI        ++  L  ++ ++ +
Sbjct: 122 IRLTGGEPLIRPDVV--DIVARLHQLEGLRTI 151


>gi|313902209|ref|ZP_07835617.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter
           subterraneus DSM 13965]
 gi|313467544|gb|EFR63050.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter
           subterraneus DSM 13965]
          Length = 482

 Score = 36.2 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 4/79 (5%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT----GG 152
            L   +  C   C +C     +   +G        E  L  +     +   + +    GG
Sbjct: 103 ALYIHVPYCRQRCYYCDFNTYLLDPEGKRRYLAALERELDLLAADPGLTRPLVSVFVGGG 162

Query: 153 DPLILSHKRLQKVLKTLRY 171
            P +L    L+++L+ +  
Sbjct: 163 TPSLLEPAELERLLEAVHR 181


>gi|260424643|ref|ZP_05778954.1| RNA modification enzyme, MiaB family [Dialister invisus DSM 15470]
 gi|260402668|gb|EEW96215.1| RNA modification enzyme, MiaB family [Dialister invisus DSM 15470]
          Length = 433

 Score = 36.2 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 68/182 (37%), Gaps = 36/182 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAY-IQEKSQI-WEVIF 149
           P    +K+   C   C FC+   + G+ +   + S   + +   +  ++E + I  +  F
Sbjct: 127 PYSAYIKIAEGCSNGCTFCYIPYVRGAMRSRSIPSVVHEVKRLSSEGVREFNLIAQDSSF 186

Query: 150 TGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207
            G D   L+    L ++LK L  I +V+ +R       + P   + EL++ + +  K   
Sbjct: 187 YGRD---LNDGTTLARLLKELVKIDNVKWIRL----FYLYPTYFDDELLEIITKEEKICK 239

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267
           Y+ I   H    S+  +  + R                   D  + +  L++        
Sbjct: 240 YVDIPLQH---ISDSVLRRMHRR------------------DSSQSIKKLLKKLRNT--T 276

Query: 268 PY 269
           PY
Sbjct: 277 PY 278


>gi|227500638|ref|ZP_03930687.1| thiamine biosynthesis protein ThiH [Anaerococcus tetradius ATCC
           35098]
 gi|227217225|gb|EEI82569.1| thiamine biosynthesis protein ThiH [Anaerococcus tetradius ATCC
           35098]
          Length = 472

 Score = 36.2 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117
              E  +L   +E+ + +   +  + + H+ Y +RI+L       + C   C +C     
Sbjct: 51  SHREAFVLLSCKEEDLNEEIFNLARELKHKFYANRIVLFAPLYLSNYCVNGCSYCPYHGQ 110

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
             +     L+  +    +  +Q+       +  G DP+    + + + + T+  IKH
Sbjct: 111 NKTIPRRKLTQDEIREQVIALQDLGHKRLALEAGEDPIHNPLEYILESIHTIYNIKH 167


>gi|53719965|ref|YP_108951.1| putative pyruvate radical-activating enzyme [Burkholderia
           pseudomallei K96243]
 gi|53725684|ref|YP_102410.1| radical SAM domain-containing protein [Burkholderia mallei ATCC
           23344]
 gi|76811377|ref|YP_334194.1| radical SAM domain-containing protein [Burkholderia pseudomallei
           1710b]
 gi|121598521|ref|YP_993691.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei SAVP1]
 gi|124384170|ref|YP_001028848.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei NCTC 10229]
 gi|126440040|ref|YP_001059711.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei 668]
 gi|126450188|ref|YP_001081241.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei NCTC 10247]
 gi|167001134|ref|ZP_02266935.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei PRL-20]
 gi|167720455|ref|ZP_02403691.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei DM98]
 gi|167739449|ref|ZP_02412223.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei 14]
 gi|167825055|ref|ZP_02456526.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei 9]
 gi|167895144|ref|ZP_02482546.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei 7894]
 gi|167903530|ref|ZP_02490735.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei NCTC 13177]
 gi|167911777|ref|ZP_02498868.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei 112]
 gi|167919782|ref|ZP_02506873.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei BCC215]
 gi|238562381|ref|ZP_00440588.2| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei GB8 horse 4]
 gi|254184291|ref|ZP_04890881.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
           pseudomallei 1655]
 gi|254261769|ref|ZP_04952823.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
           pseudomallei 1710a]
 gi|52210379|emb|CAH36360.1| putative pyruvate radical-activating enzyme [Burkholderia
           pseudomallei K96243]
 gi|52429107|gb|AAU49700.1| radical SAM domain protein [Burkholderia mallei ATCC 23344]
 gi|76580830|gb|ABA50305.1| radical SAM domain protein [Burkholderia pseudomallei 1710b]
 gi|121227331|gb|ABM49849.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei SAVP1]
 gi|124292190|gb|ABN01459.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei NCTC 10229]
 gi|126219533|gb|ABN83039.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei 668]
 gi|126243058|gb|ABO06151.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei NCTC 10247]
 gi|184214822|gb|EDU11865.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
           pseudomallei 1655]
 gi|238522812|gb|EEP86254.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei GB8 horse 4]
 gi|243063082|gb|EES45268.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia mallei PRL-20]
 gi|254220458|gb|EET09842.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
           pseudomallei 1710a]
          Length = 239

 Score = 36.2 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%)

Query: 93  YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
           YP +   +  +  CP  C +C        Q  +  +  + +A LA++  +   I  V+F+
Sbjct: 24  YPGQFAAVVFVQGCPWRCGYC---HNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFS 80

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           GG+P I     L         I  V+ L
Sbjct: 81  GGEPSI--DPALA------ASIDDVRRL 100


>gi|328552419|gb|AEB22911.1| YfkA [Bacillus amyloliquefaciens TA208]
 gi|328910769|gb|AEB62365.1| hypothetical protein LL3_00820 [Bacillus amyloliquefaciens LL3]
          Length = 373

 Score = 36.2 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 16/121 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +      +C + C  C     +  +    L        L  I     +  +  TGG+P +
Sbjct: 34  VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPLDLLLKRLEEI---PLLRSISITGGEP-M 89

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214
           LS K +++ +  L    H + +R           +IN  L   +    +  P    +H +
Sbjct: 90  LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIGRYERIIPYLDVLHIS 139

Query: 215 H 215
           H
Sbjct: 140 H 140


>gi|298526582|ref|ZP_07013991.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis 94_M4241A]
 gi|298496376|gb|EFI31670.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis 94_M4241A]
          Length = 359

 Score = 36.2 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L ++  C + CR+C          +  +LS K+  A +        + +V  TGG+PLI 
Sbjct: 31  LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 89

Query: 158 SHKRLQKVLKTLRY 171
               L ++++TL  
Sbjct: 90  PD--LPEIVRTLSA 101


>gi|289549352|ref|YP_003474340.1| MiaB-like tRNA modifying enzyme [Thermocrinis albus DSM 14484]
 gi|289182969|gb|ADC90213.1| MiaB-like tRNA modifying enzyme [Thermocrinis albus DSM 14484]
          Length = 407

 Score = 36.2 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 65/179 (36%), Gaps = 38/179 (21%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152
             R  +K+   C  +C FC      G  + +V   K  E    ++  +    EV+ TG  
Sbjct: 138 RSRPFVKIQEGCNKFCSFCVIPYARGKVR-SVPPQKVLEEI--HLLAQKGFEEVVITGTQ 194

Query: 153 ------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
                 D        L K+LK +  I+ ++++R  S    + P  +  EL+  + E  K 
Sbjct: 195 LSQYGWDMGT----TLGKLLKEMVKIEGIKLIRLSS----LHPAELEEELLTIITEEEK- 245

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265
             IA H + P + S      I +L   G                P+    L+   VE R
Sbjct: 246 --IAPHFHLPLQ-SGSLR--ILQLMERGYT--------------PDEYRRLVEKLVEKR 285


>gi|256061056|ref|ZP_05451212.1| molybdenum cofactor biosynthesis protein A [Brucella neotomae 5K33]
 gi|261325058|ref|ZP_05964255.1| molybdenum cofactor biosynthesis protein A [Brucella neotomae 5K33]
 gi|261301038|gb|EEY04535.1| molybdenum cofactor biosynthesis protein A [Brucella neotomae 5K33]
          Length = 344

 Score = 36.2 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            K +  ++  L        +  + +    S++      R   EL  C     + + +++ 
Sbjct: 86  RKNIMHLVGNLSRHLKSGALDELALTTNGSQL-----ARFAGELADC---GVRRINVSLD 137

Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249
             +P +F               I     AGI +   +V LK  ND
Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182


>gi|237669370|ref|ZP_04529352.1| ThiH/BioB family protein [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 468

 Score = 36.2 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 93  YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y +RI+    L L + C   C +C         +   L+ ++ +  +  +Q+       +
Sbjct: 76  YGNRIVMFAPLYLSNYCVNGCVYCPYHHKNKHIRRKKLTQEEIKNEVIALQDMGHKRLAL 135

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
            TG DP+    + + + +KT+  IKH
Sbjct: 136 ETGEDPVNNPIEYVLESIKTIYGIKH 161


>gi|182419049|ref|ZP_02950303.1| thiamine biosynthesis protein ThiH [Clostridium butyricum 5521]
 gi|182377004|gb|EDT74574.1| thiamine biosynthesis protein ThiH [Clostridium butyricum 5521]
 gi|256258836|gb|EEP52815.2| putative thiazole biosynthesis protein [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 472

 Score = 36.2 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%)

Query: 93  YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y +RI+    L L + C   C +C         +   L+ ++ +  +  +Q+       +
Sbjct: 80  YGNRIVMFAPLYLSNYCVNGCVYCPYHHKNKHIRRKKLTQEEIKNEVIALQDMGHKRLAL 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
            TG DP+    + + + +KT+  IKH
Sbjct: 140 ETGEDPVNNPIEYVLESIKTIYGIKH 165


>gi|15965617|ref|NP_385970.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti
           1021]
 gi|307302736|ref|ZP_07582492.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti
           BL225C]
 gi|307318584|ref|ZP_07598018.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti
           AK83]
 gi|24211996|sp|Q92PB4|MOAA_RHIME RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|15074798|emb|CAC46443.1| Probable molybdenum cofactor biosynthesis protein [Sinorhizobium
           meliloti 1021]
 gi|306895924|gb|EFN26676.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti
           AK83]
 gi|306903100|gb|EFN33691.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti
           BL225C]
          Length = 349

 Score = 36.2 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 21/172 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +       + ++  TGG+PL+  
Sbjct: 34  VSVTDRCDFRCTYCMAEHMAFLPKKDLLTLEELQRLCSAFIA-KGVRKLRLTGGEPLVRK 92

Query: 159 HKR--LQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211
           +    ++++ K +    +  + +    S++      +   EL+ C       V +     
Sbjct: 93  NIMFLIRELGKEIEAGRLDELTLTTNGSQL-----SKFAAELVDC-GVRRINVSLDTLDP 146

Query: 212 ----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
                     E +   +  I     AG+ +   +V LK  ND    +  LMR
Sbjct: 147 DKFRQITRWGELAR-VLEGIDAALAAGLKVKINAVALKDFND--AEIPELMR 195


>gi|325122551|gb|ADY82074.1| molybdopterin biosynthesis, protein A [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 346

 Score = 36.2 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 66/160 (41%), Gaps = 15/160 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C         K  +LS +      +++ ++  I  +  TGG+PL+  
Sbjct: 29  ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCSFMVQQ-GIESIRITGGEPLM-- 85

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
            + +   ++ L+ +K + + R      +        +  + LK+AG   + I++ +  P 
Sbjct: 86  RQGIVYFVRDLQALKVLGLKRIS----MTTNGHYLAKYAKQLKDAGLDDLNISLDSLDPV 141

Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
              E +    E  +  I    +AG+      VL+K  NDD
Sbjct: 142 QFKELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKNKNDD 181


>gi|323464035|gb|ADX76188.1| radical SAM domain protein [Staphylococcus pseudintermedius ED99]
          Length = 379

 Score = 36.2 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +     ++C + C  C     + ++   +L        L  I     +  +  TGG+P +
Sbjct: 33  VEFTTTNLCNMRCSHCAVGYTLQTKDPDILPMSLILQRLDEI---PTLRTISITGGEP-M 88

Query: 157 LSHKRLQKVLKTLRY 171
            S K +++V+K L  
Sbjct: 89  FSKKSIREVVKPLLK 103


>gi|291566663|dbj|BAI88935.1| tRNA-i(6)A37 modification enzyme MiaB [Arthrospira platensis
           NIES-39]
          Length = 452

 Score = 36.2 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 21/146 (14%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW----EVIF 149
              + +++ C   C +C    + G+++      +   A +  +      ++      +  
Sbjct: 148 TAWVNVIYGCNERCTYCVVPNVRGTEQSRTP--EAIRAEMEELARAGYKEVTLLGQNIDA 205

Query: 150 TGGD-PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204
            G D P      R    L  +L  +  I  ++ +RF +  P          LI+   E  
Sbjct: 206 YGRDLPGSTPDGRHQHTLTDLLYYVHDIPGIERIRFATSHPRY----FTERLIRACAELP 261

Query: 205 KPVYIAIHANHP-YEFSEEAIAAISR 229
           K   +  H + P      + + A++R
Sbjct: 262 K---VCEHFHIPFQSGDNDVLRAMAR 284


>gi|305663275|ref|YP_003859563.1| Radical SAM domain protein [Ignisphaera aggregans DSM 17230]
 gi|304377844|gb|ADM27683.1| Radical SAM domain protein [Ignisphaera aggregans DSM 17230]
          Length = 295

 Score = 36.2 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 66/183 (36%), Gaps = 23/183 (12%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           L     C  +C +C+    +G +      +  ++ E  L  I + + +   + +  DP  
Sbjct: 23  LHPYTGCSHFCLYCYATSYIGRKPSVPKKNFIENLEKDLRQIVKGAVVE--LSSSSDPYP 80

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216
               +L+   KTL  +      R   R+ I     I    I  L     P  + I     
Sbjct: 81  PIEMQLELTRKTLEVLG-----RNGFRILITTKSDIVARDIDILLRY--PSAVMITITTL 133

Query: 217 YE-----FSEEA------IAAISRLANAGIILLSQS-VLLKGINDDPEILANLMRTFVEL 264
            +         A      + A+ +L+ AGI +  +   ++  INDDPE L  L+    ++
Sbjct: 134 DQGVAKVLEPGAPPPDRRMEAVRKLSRAGIPVGIRIDPVIPMINDDPEKLRELVNIARDV 193

Query: 265 RIK 267
              
Sbjct: 194 GAL 196


>gi|258422954|ref|ZP_05685853.1| conserved hypothetical protein [Staphylococcus aureus A9635]
 gi|257846741|gb|EEV70756.1| conserved hypothetical protein [Staphylococcus aureus A9635]
          Length = 383

 Score = 36.2 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++  P E  + + ++    L  I             ++C + C  C             +
Sbjct: 12  IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 58

Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +  +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 59  DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 111


>gi|183221187|ref|YP_001839183.1| hypothetical protein LEPBI_I1801 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911278|ref|YP_001962833.1| thiamine biosynthesis enzyme [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167775954|gb|ABZ94255.1| Thiamine biosynthesis enzyme [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167779609|gb|ABZ97907.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 367

 Score = 36.2 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 17/114 (14%)

Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161
            + C V C FC   + +G+ KG VLS +D    + Y   +    ++   GG   +     
Sbjct: 72  TNYCNVECSFCSFMDEIGNGKGYVLSKEDILQKMDY-AMEEGADQMFLQGG---VYPELP 127

Query: 162 LQKVLKTLRYIK------HVQILR----FHSRVPIVDPQRINPELIQCLKEAGK 205
               L  +R +K      H++        +       P R   E+++ LKEAG 
Sbjct: 128 FDYYLDVIRTVKAKYPKMHIRAFSPVEVINLETITGKPLR---EVLEILKEAGL 178


>gi|146329545|ref|YP_001210081.1| translation initiation factor IF-1 [Dichelobacter nodosus VCS1703A]
 gi|190359636|sp|A5EXE7|IF1_DICNV RecName: Full=Translation initiation factor IF-1
 gi|146233015|gb|ABQ13993.1| translation initiation factor IF-1 [Dichelobacter nodosus VCS1703A]
          Length = 72

 Score = 36.2 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ +E G +I       ISG  +  YI  L G   KV++  +++ K   G     
Sbjct: 22  FRVELENGHQI----NAHISGRMRKHYIRILTGDKVKVEMTPYDLSK---GRIVFR 70


>gi|126451746|ref|YP_001066995.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei 1106a]
 gi|167816652|ref|ZP_02448332.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei 91]
 gi|167846563|ref|ZP_02472071.1| anaerobic ribonucleoside-triphosphate reductase activating protein
           [Burkholderia pseudomallei B7210]
 gi|242317715|ref|ZP_04816731.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
           pseudomallei 1106b]
 gi|126225388|gb|ABN88928.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
           pseudomallei 1106a]
 gi|242140954|gb|EES27356.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia
           pseudomallei 1106b]
          Length = 239

 Score = 36.2 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%)

Query: 93  YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150
           YP +   +  +  CP  C +C        Q  +  +  + +A LA++  +   I  V+F+
Sbjct: 24  YPGQFAAVVFVQGCPWRCGYC---HNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFS 80

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           GG+P I     L         I  V+ L
Sbjct: 81  GGEPSI--DPALA------ASIDDVRRL 100


>gi|308802520|ref|XP_003078573.1| putative cullin (ISS) [Ostreococcus tauri]
 gi|116057026|emb|CAL51453.1| putative cullin (ISS) [Ostreococcus tauri]
          Length = 747

 Score = 36.2 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDD--PEILANLMRTFVELRI 266
           E   A+  LA A + +L++    + INDD   E+   L      +++
Sbjct: 611 ELKRALQSLACAKVRILNKEPKSREINDDDSFEVNTALNERLFRIKV 657


>gi|15842680|ref|NP_337717.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis CDC1551]
 gi|254233733|ref|ZP_04927058.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis C]
 gi|13882999|gb|AAK47531.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium
           tuberculosis CDC1551]
 gi|124599262|gb|EAY58366.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium
           tuberculosis C]
          Length = 368

 Score = 36.2 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%)

Query: 99  LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           L ++  C + CR+C          +  +LS K+  A +        + +V  TGG+PLI 
Sbjct: 40  LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 98

Query: 158 SHKRLQKVLKTLRY 171
               L ++++TL  
Sbjct: 99  PD--LPEIVRTLSA 110


>gi|258543608|ref|YP_003189041.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256634686|dbj|BAI00662.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01]
 gi|256637742|dbj|BAI03711.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-03]
 gi|256640796|dbj|BAI06758.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-07]
 gi|256643851|dbj|BAI09806.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-22]
 gi|256646906|dbj|BAI12854.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-26]
 gi|256649959|dbj|BAI15900.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-32]
 gi|256652949|dbj|BAI18883.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-01-42C]
 gi|256656003|dbj|BAI21930.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO
           3283-12]
          Length = 461

 Score = 36.2 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 5/78 (6%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGG 152
           L   +  C   CRFC     V   +   L+      ++    +A + E+  +  V F GG
Sbjct: 53  LYFHVPFCDELCRFCGCNTSVMRHEDGRLAYGDLLREEMRRIVALVGEQRTVRHVQFGGG 112

Query: 153 DPLILSHKRLQKVLKTLR 170
            P  L    L+++++++R
Sbjct: 113 TPTTLPPHSLRQIMRSIR 130


>gi|224371859|ref|YP_002606025.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfobacterium autotrophicum HRM2]
 gi|223694578|gb|ACN17861.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Desulfobacterium autotrophicum HRM2]
          Length = 289

 Score = 36.2 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 54/125 (43%), Gaps = 20/125 (16%)

Query: 95  DRILLKLLHVCPVY-CRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           + ILL++   C    C FC  ++ E    +K  V+  +D E A  + + +     +    
Sbjct: 15  NSILLQVTVGCSHNKCTFCGAYKGERFKIKKDPVI-MEDIEFAARHCRRQ---NRLFICD 70

Query: 152 GDPLILSHKRLQKVLKTL-RYIKHVQILRFH----SRVPIVDPQRI-NPELIQCLKEAGK 205
           GD LI+  +RL  +L+ + + +  ++  R      ++       R+ + + ++ L+  G 
Sbjct: 71  GDALIIPQRRLVPILEQINQRLPWIE--RIGLYANTKSI-----RMKSDQELEQLRSLGV 123

Query: 206 PVYIA 210
            +   
Sbjct: 124 KIAYM 128


>gi|170750295|ref|YP_001756555.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
           radiotolerans JCM 2831]
 gi|170656817|gb|ACB25872.1| molybdenum cofactor biosynthesis protein A [Methylobacterium
           radiotolerans JCM 2831]
          Length = 350

 Score = 36.2 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 62/166 (37%), Gaps = 25/166 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C    M    K  +L+ ++ +        +  + ++  TGG+PL+  
Sbjct: 36  ISVTDRCDLRCAYCMSEHMEFLPKRDLLTLEELDRLCGVFIAR-GVRKLRITGGEPLVRR 94

Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211
                 +RL + L +   ++ + +    +++      R   EL   L      V +    
Sbjct: 95  DIMHLFRRLSRHLDS-GALEELTLTTNGTQL-----TRYADELAS-LGVRRINVSLDTLD 147

Query: 212 --HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
                   E +     +  +  I+    AG+ +   +V L+ +N D
Sbjct: 148 PDKF---REITRRGDLKVVLDGIAAARAAGMKVKINAVALRDVNAD 190


>gi|15639091|ref|NP_218537.1| translation initiation factor IF-1 [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189025331|ref|YP_001933103.1| translation initiation factor IF-1 [Treponema pallidum subsp.
           pallidum SS14]
 gi|6016311|sp|O83135|IF1_TREPA RecName: Full=Translation initiation factor IF-1
 gi|3322358|gb|AAC65092.1| translation initiation factor 1 (infA) [Treponema pallidum subsp.
           pallidum str. Nichols]
 gi|189017906|gb|ACD70524.1| translation initiation factor 1 [Treponema pallidum subsp. pallidum
           SS14]
 gi|291059516|gb|ADD72251.1| translation initiation factor IF-1 [Treponema pallidum subsp.
           pallidum str. Chicago]
          Length = 72

 Score = 36.2 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 7/56 (12%)

Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338
           FR+ ++ G +I+      +SG  +  YI  +PG   KV +  +++ +   G     
Sbjct: 22  FRVQLQNGHEIL----AYLSGRMRKHYIRIVPGDSVKVALSPYDLSR---GRIMFR 70


>gi|254511318|ref|ZP_05123385.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacteraceae
           bacterium KLH11]
 gi|221535029|gb|EEE38017.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacteraceae
           bacterium KLH11]
          Length = 439

 Score = 36.2 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 11/98 (11%)

Query: 96  RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKD--TEAALAYIQEKSQ-IWEVI 148
              L +   C  +C FC     R   V      ++       E  +  I    Q +    
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRIIREAQDLVERGVREITLLGQNVNAYH 209

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             G D        L  ++  L  +  ++ +RF +  P 
Sbjct: 210 GAGPDG----DMTLAALIWELNKVDGLERIRFTTSHPN 243


>gi|109947136|ref|YP_664364.1| hypothetical protein Hac_0545 [Helicobacter acinonychis str.
           Sheeba]
 gi|109714357|emb|CAJ99365.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 418

 Score = 36.2 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151
             R  +K+   C   C +C     + S +G   S ++    L    +     + EV+ TG
Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCAKGVQEVVLTG 187

Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182
            +       R   + +++K L  I  ++ +R  S
Sbjct: 188 TNVGSYGKDRESNIARLIKKLSQIVGLKRIRIGS 221


>gi|307353972|ref|YP_003895023.1| Radical SAM domain-containing protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307157205|gb|ADN36585.1| Radical SAM domain protein [Methanoplanus petrolearius DSM 11571]
          Length = 362

 Score = 36.2 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 51/119 (42%), Gaps = 15/119 (12%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           + L+++  +C   C  CF        +G  ++ +D +  +    ++ ++  V  TGG+P 
Sbjct: 28  KALIRITDICNARCVHCFTSA---DNQGETMTLEDFQDFVVPRLKQCRVSRVTLTGGEPF 84

Query: 156 ILSHKRLQKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIH 212
           +  +     ++  ++ + +  I +   +   +     I  + IQ L  E    + +++H
Sbjct: 85  LHPN-----IIDFVKLLSNADISVGICTNATV-----ITTDQIQALSHERNVHINVSLH 133


>gi|157822765|ref|NP_001100351.1| molybdenum cofactor biosynthesis protein 1 [Rattus norvegicus]
 gi|149069512|gb|EDM18953.1| molybdenum cofactor synthesis 1 (predicted), isoform CRA_b [Rattus
           norvegicus]
          Length = 480

 Score = 36.2 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 7/92 (7%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G  H Y   + + L   C + CR+C   E V  + K  +L++++    LA +  K  + +
Sbjct: 66  GRQHSY---LRISLTEKCNLRCRYCMPEEGVSLTPKADLLTTEEILT-LARLFVKEGVDK 121

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           +  TGG+PLI        ++  L  ++ ++ +
Sbjct: 122 IRLTGGEPLIRPDVV--DIVARLHQLEGLRTI 151


>gi|189461431|ref|ZP_03010216.1| hypothetical protein BACCOP_02086 [Bacteroides coprocola DSM 17136]
 gi|189431960|gb|EDV00945.1| hypothetical protein BACCOP_02086 [Bacteroides coprocola DSM 17136]
          Length = 472

 Score = 36.2 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 5/117 (4%)

Query: 63  QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREM 117
              E  +L E  ++ + +  ++  + I  R Y +RI+    L L + C   C +C     
Sbjct: 49  SHREAAVLLECDDNDLLEEIYALARKIKQRFYGNRIVMFAPLYLSNYCVNSCVYCPYHIK 108

Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
             S     L+  +    +  +Q+       I  G DPL    + + + +KT+  I+H
Sbjct: 109 NKSIARKKLTQDEIRQEVIALQDMGHKRLAIEAGEDPLHNPIEYILESIKTIYSIQH 165


>gi|84502860|ref|ZP_01000973.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola batsensis
           HTCC2597]
 gi|84388843|gb|EAQ01713.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola batsensis
           HTCC2597]
          Length = 440

 Score = 36.2 bits (83), Expect = 7.4,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 14/117 (11%)

Query: 96  RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKD--TEAALAYIQEKSQ-IWEVI 148
              L +   C  +C FC     R   V      VL+      E  +  I    Q +    
Sbjct: 149 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPVARVLTEARDLVERGVREITLLGQNVNAYH 208

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
             G D        L  +++ L  I+ ++ +RF +  P      ++ +LI    E GK
Sbjct: 209 GEGPDG---RDWSLAGLIRELAEIEGLERIRFTTSHPND----MSDDLIAAHGEVGK 258


>gi|238752394|ref|ZP_04613872.1| Coproporphyrinogen III oxidase [Yersinia rohdei ATCC 43380]
 gi|238709435|gb|EEQ01675.1| Coproporphyrinogen III oxidase [Yersinia rohdei ATCC 43380]
          Length = 414

 Score = 36.2 bits (83), Expect = 7.5,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%)

Query: 96  RILLKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           R+L   +  C  +C FC       + E        +L   + EAA   +Q    I  + F
Sbjct: 31  RLLYLHIPFCATHCTFCGFYQNPLQPESTARYTDYLLQELNMEAASPLLQGGP-IHAIYF 89

Query: 150 TGGDPLILSHKRLQKVLKTLRY 171
            GG P  LS ++L +++  LR 
Sbjct: 90  GGGTPSALSAEQLHRIISQLRQ 111


>gi|254689196|ref|ZP_05152450.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 6
           str. 870]
 gi|260754697|ref|ZP_05867045.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 6
           str. 870]
 gi|260674805|gb|EEX61626.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 6
           str. 870]
          Length = 344

 Score = 36.2 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 5/78 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLRYIKHVQ 176
            K +  ++  L    H++
Sbjct: 86  RKNIMHLIGNLSR--HLK 101


>gi|268318084|ref|YP_003291803.1| Radical SAM domain-containing protein [Rhodothermus marinus DSM
           4252]
 gi|262335618|gb|ACY49415.1| Radical SAM domain protein [Rhodothermus marinus DSM 4252]
          Length = 360

 Score = 36.2 bits (83), Expect = 7.6,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 12/109 (11%)

Query: 72  EEREDPIGDNNHSPLKGIVHRYPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKD 130
               DPI        K + H  P   +L      C + CRFC   ++  S++   L+ + 
Sbjct: 57  GFCIDPIEK------KPLNHFLPGTAVLSFGTAGCNLGCRFCQNWDISKSREMDTLADEA 110

Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179
               +A + E      V FT  DP+I     L      +    H + +R
Sbjct: 111 APETIARVAEALGCRSVAFTYNDPVIFHEYALD-----VARACHERGIR 154


>gi|313900907|ref|ZP_07834397.1| iron-only hydrogenase maturation rSAM protein HydG [Clostridium sp.
           HGF2]
 gi|312954327|gb|EFR36005.1| iron-only hydrogenase maturation rSAM protein HydG [Clostridium sp.
           HGF2]
          Length = 472

 Score = 36.2 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 27/166 (16%)

Query: 90  VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145
              Y +RI+    L L + C   C +C         +   L+ ++    +  +Q+     
Sbjct: 77  QKLYGNRIVMFAPLYLSNYCVNGCVYCPYHYKNKHIRRKKLTQEEIRQEVIALQDMGHKR 136

Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPELIQCLK 201
             + TG DP+    + + + +KT+  IKH    ++ +        V+      +  + LK
Sbjct: 137 LALETGEDPVHSPIEYVLESIKTIYGIKHKNGAIRRV-------NVNIAATTVDNYRKLK 189

Query: 202 EAG------------KPVYIAIHANHPYEFSEEAIAAISRLANAGI 235
           EAG            K  Y  +H N P         A+ R    GI
Sbjct: 190 EAGIGTYILFQETYNKQSYEQLHPNGPKSNYAYHTEAMDRAMEGGI 235


>gi|282904508|ref|ZP_06312393.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus C160]
 gi|282919711|ref|ZP_06327443.1| hypothetical protein SASG_02328 [Staphylococcus aureus subsp.
           aureus C427]
 gi|297590071|ref|ZP_06948711.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus MN8]
 gi|282316349|gb|EFB46726.1| hypothetical protein SASG_02328 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282595064|gb|EFC00031.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus C160]
 gi|297577199|gb|EFH95913.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus MN8]
 gi|315193403|gb|EFU23800.1| hypothetical protein CGSSa00_04716 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 381

 Score = 36.2 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++  P E  + + ++    L  I             ++C + C  C             +
Sbjct: 10  IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56

Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +  +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 57  DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 109


>gi|90423576|ref|YP_531946.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas
           palustris BisB18]
 gi|90105590|gb|ABD87627.1| GTP cyclohydrolase subunit MoaA [Rhodopseudomonas palustris BisB18]
          Length = 344

 Score = 36.2 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 29/171 (16%), Positives = 64/171 (37%), Gaps = 35/171 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + C +C   +M    +  +L+ ++ +   +       + ++  TGG+PL+  
Sbjct: 29  VSITDRCDLRCVYCMSEDMTFLPRADLLTLEELDRLCSAFIA-KGVKKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLRYIKH---VQILRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
            + +  ++++L    H   +  L      S++      R   EL  C       V +   
Sbjct: 86  RRNMMSLVRSLSRHLHTGALDELTLTTNGSQL-----ARYAAELADC-GVRRINVSLDT- 138

Query: 213 ANHPYEFSEEAIAAISRL-------------ANAGIILLSQSVLLKGINDD 250
                    +   AI+R               +AG+ +   +V LK +N+D
Sbjct: 139 ------LDPDKFRAITRWGDLGKVLAGIDAARDAGLAVKINAVALKDVNED 183


>gi|258515371|ref|YP_003191593.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257779076|gb|ACV62970.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771]
          Length = 291

 Score = 36.2 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 36/85 (42%), Gaps = 6/85 (7%)

Query: 97  ILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQIWEVIFTGGDP 154
           +++++   C    C FC    M   ++  + S ++ +A + Y +     +  V    GD 
Sbjct: 17  LIIQVTIGCKHNACSFCG---MYREKRFRIKSWEEIKADIDYCKINYLHVRRVFLADGDA 73

Query: 155 LILSHKRLQKVLKTLRYI-KHVQIL 178
           L +    + K+L  L  +   ++ +
Sbjct: 74  LAMESAEIIKILDYLYEVFPGLERI 98


>gi|240104125|ref|YP_002960434.1| molybdenum cofactor biosynthesis protein A [Thermococcus
           gammatolerans EJ3]
 gi|239911679|gb|ACS34570.1| Molybdenum cofactor biosynthesis protein A (moaA) [Thermococcus
           gammatolerans EJ3]
          Length = 308

 Score = 36.2 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 43/170 (25%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAA 134
           P+ D    P+  +         + L   C   C FC R  +  +   +   ++ ++ E  
Sbjct: 2   PLYDRFGRPVTNLR--------ISLTQECNFRCFFCHREGQRFLAKNE---MTPEEIERI 50

Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRF---HSRVPIVDPQ 190
           +  I  +  I +V  TGG+P +        +L+ +R I  +V  L      SR+      
Sbjct: 51  VR-IASRLGIRKVKLTGGEPTVRED-----ILEIVRRIKPYVIDLSMTTNGSRL------ 98

Query: 191 RINPELIQCLKEAGKP-VYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239
               EL + L +AG   V +++H         E    I      G+  L+
Sbjct: 99  ---KELAKPLAKAGLNRVNVSLH-----SLKPEVYKKI-----TGVDALN 135


>gi|167950322|ref|ZP_02537396.1| hypothetical protein Epers_29333 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 344

 Score = 36.2 bits (83), Expect = 7.7,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 35/113 (30%), Gaps = 24/113 (21%)

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKG 123
            E   L +   DP G+   + L            L     CP  CR C F          
Sbjct: 181 RERLALLDGLPDPGGETRFAKLG-----------LIPAMGCPQTCRHCMFIWR------- 222

Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176
                +  E    Y         V+FTGGD      + L      +R ++H++
Sbjct: 223 -PPVKQQLEPQSLYQLVDGLTESVLFTGGDL----TRHLDHFYAAIRSMRHIR 270


>gi|228949221|ref|ZP_04111488.1| Radical SAM domain protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228810447|gb|EEM56801.1| Radical SAM domain protein [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
          Length = 468

 Score = 36.2 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 15/119 (12%)

Query: 57  ARQFIPQKEELN-----ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111
            R+ I   EEL         ++ +D   D  + P       Y   + L + H C + C +
Sbjct: 62  LRETIADIEELKRDGKLFTEDDYKDLSIDLINRPT------YVKALCLNVAHTCNLSCEY 115

Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLK 167
           CF  +   +    ++S +  + A+ ++ E S      +V F GG+PL+   K +++++ 
Sbjct: 116 CFASQGKYNGNRAIMSYEVGKRAIDFLLENSGNHRNLDVDFFGGEPLMA-WKTVKQIVA 173


>gi|218884694|ref|YP_002429076.1| Predicted Fe-S oxidoreductase [Desulfurococcus kamchatkensis 1221n]
 gi|218766310|gb|ACL11709.1| Predicted Fe-S oxidoreductase [Desulfurococcus kamchatkensis 1221n]
          Length = 572

 Score = 36.2 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 44/224 (19%), Positives = 82/224 (36%), Gaps = 37/224 (16%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIWEVIFTGGDP 154
           + + + + C + C +CF         G V   +       +  I+++     +  TGG+P
Sbjct: 125 VNMVVTNRCNLSCWYCF---FYSEASGYVYEPRLDQIREMVRSIKKQGVTVAIQLTGGEP 181

Query: 155 LILSHKRLQKVLKTL--RYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208
           L+     L  ++K L    ++H+Q+    +RF   + I DP +   E  + L+ +G    
Sbjct: 182 LLRED--LVDIVKLLKEEGVRHIQLNTNGIRFA-ELYIEDPVKAV-EYARELRSSGVNTV 237

Query: 209 I-----AIHA----NHPYEFSEEAIAAISRLANAGI--ILLSQSVLLKGINDD-----PE 252
                         NH      E    +     AG+   +L  +V+ KG+N         
Sbjct: 238 YLSFDGVTPVTNWKNHW-----EVPYILETFRKAGMTSTVLVPTVI-KGVNTHELGAIVR 291

Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296
             A  M     +  +P  L           +R+TI E  K++  
Sbjct: 292 FAAKHMDVIRAVNFQPVSLTGYMKKHEREKYRITIPEVVKLIEE 335


>gi|83590961|ref|YP_430970.1| GTP cyclohydrolase subunit MoaA [Moorella thermoacetica ATCC 39073]
 gi|123725642|sp|Q2RGL2|MOAA_MOOTA RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|83573875|gb|ABC20427.1| GTP cyclohydrolase subunit MoaA [Moorella thermoacetica ATCC 39073]
          Length = 323

 Score = 36.2 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 18/162 (11%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + CR+C     V  +    +   +  A LA +   + I  +  TGG+PL+  
Sbjct: 14  IAITDRCNLRCRYCMPATGVPLKGHEDILRLEEIATLARVAAGTGISRIRLTGGEPLV-- 71

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA---N 214
            K +  +++ L  I  ++ +   +             L   LKEAG K V I++     +
Sbjct: 72  RKNVVTLVRELAAIPGLEEISLTTNGI------FLGALAFSLKEAGLKRVNISLDTLKKD 125

Query: 215 HPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250
                +           I     AG+  +    V+ +G NDD
Sbjct: 126 RYRYITRRGNITSVWQGIRAALAAGLTPVKLNVVITRGFNDD 167


>gi|62289889|ref|YP_221682.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 1
           str. 9-941]
 gi|82699819|ref|YP_414393.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis
           biovar Abortus 2308]
 gi|189024134|ref|YP_001934902.1| molybdenum cofactor biosynthesis protein A [Brucella abortus S19]
 gi|237815389|ref|ZP_04594387.1| molybdenum cofactor biosynthesis protein A [Brucella abortus str.
           2308 A]
 gi|254697332|ref|ZP_05159160.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 2
           str. 86/8/59]
 gi|254730230|ref|ZP_05188808.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 4
           str. 292]
 gi|256257446|ref|ZP_05462982.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 9
           str. C68]
 gi|260545361|ref|ZP_05821102.1| molybdenum cofactor biosynthesis protein A [Brucella abortus NCTC
           8038]
 gi|260757921|ref|ZP_05870269.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 4
           str. 292]
 gi|260761743|ref|ZP_05874086.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260883723|ref|ZP_05895337.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 9
           str. C68]
 gi|297248294|ref|ZP_06932012.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 5
           str. B3196]
 gi|75496872|sp|Q57DG3|MOAA_BRUAB RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|123740914|sp|Q2YNT7|MOAA_BRUA2 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|226704812|sp|B2S5I1|MOAA_BRUA1 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|62196021|gb|AAX74321.1| MoaA, molybdenum cofactor biosynthesis protein A [Brucella abortus
           bv. 1 str. 9-941]
 gi|82615920|emb|CAJ10929.1| MoaA/nifB/pqqE family:Elongator protein 3/MiaB/NifB:Radical SAM
           [Brucella melitensis biovar Abortus 2308]
 gi|189019706|gb|ACD72428.1| MoaA/nifB/pqqE family protein [Brucella abortus S19]
 gi|237790226|gb|EEP64436.1| molybdenum cofactor biosynthesis protein A [Brucella abortus str.
           2308 A]
 gi|260096768|gb|EEW80643.1| molybdenum cofactor biosynthesis protein A [Brucella abortus NCTC
           8038]
 gi|260668239|gb|EEX55179.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 4
           str. 292]
 gi|260672175|gb|EEX58996.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 2
           str. 86/8/59]
 gi|260873251|gb|EEX80320.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 9
           str. C68]
 gi|297175463|gb|EFH34810.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 5
           str. B3196]
          Length = 344

 Score = 36.2 bits (83), Expect = 7.8,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 5/78 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +   E   + ++  TGG+PL+  
Sbjct: 29  VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85

Query: 159 HKRLQKVLKTLRYIKHVQ 176
            K +  ++  L    H++
Sbjct: 86  RKNIMHLIGNLSR--HLK 101


>gi|300871623|ref|YP_003786496.1| thiamine biosynthesis protein [Brachyspira pilosicoli 95/1000]
 gi|300689324|gb|ADK31995.1| thiamine biosynthesis protein [Brachyspira pilosicoli 95/1000]
          Length = 474

 Score = 36.2 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 31/76 (40%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L L + C   C +C             L+  +  A +  +Q+       + TG DP   S
Sbjct: 94  LYLSNYCINGCVYCPYHAKNKHIARKQLTQDEIRAEVIALQDMGHKRLALETGEDPDYAS 153

Query: 159 HKRLQKVLKTLRYIKH 174
            + L + +KT+  IKH
Sbjct: 154 MEYLLESIKTIYSIKH 169


>gi|291296099|ref|YP_003507497.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
           ruber DSM 1279]
 gi|290471058|gb|ADD28477.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus
           ruber DSM 1279]
          Length = 384

 Score = 36.2 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 15/123 (12%)

Query: 87  KGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-I 144
             + H Y        +  CP  C +C F               +  + A    ++    +
Sbjct: 4   PALQHLY------LHVPFCPTICPYCDFHVVRRYGDVVEAYLKRLAQEARGLFEQHPGPL 57

Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
             +   GG P  L    L+ + + L + I+  ++          +P  +NPE ++ L+E 
Sbjct: 58  TTLYLGGGTPSFLRSHELEALFRALPWNIEAAEV------TLEANPGTLNPERLRLLREL 111

Query: 204 GKP 206
           G  
Sbjct: 112 GVN 114


>gi|225619004|ref|YP_002720230.1| thiamine biosynthesis protein ThiH [Brachyspira hyodysenteriae WA1]
 gi|225213823|gb|ACN82557.1| thiamine biosynthesis protein [Brachyspira hyodysenteriae WA1]
          Length = 474

 Score = 36.2 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 31/76 (40%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L L + C   C +C             L+  +  A +  +Q+       + TG DP   S
Sbjct: 94  LYLSNYCINGCVYCPYHAKNKHIARKQLTQDEIRAEVIALQDMGHKRLALETGEDPDYAS 153

Query: 159 HKRLQKVLKTLRYIKH 174
            + L + +KT+  IKH
Sbjct: 154 MEYLLESIKTIYSIKH 169


>gi|85705226|ref|ZP_01036325.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. 217]
 gi|85670099|gb|EAQ24961.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. 217]
          Length = 446

 Score = 36.2 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 39/110 (35%), Gaps = 13/110 (11%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
              L +   C  +C FC      GS+    ++    E A   ++    + E+   G +  
Sbjct: 156 TAFLTVQEGCDKFCAFCVVPYTRGSEVSRPVARV-LEEARDLVER--GVREITLLGQNVN 212

Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
                       L +++  L  I  ++ +RF +  P      ++ +LI  
Sbjct: 213 AYHGAGEGGDWGLARLIWALNDIDGLERIRFTTSHPND----MDDDLIAA 258


>gi|121534167|ref|ZP_01665992.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
 gi|121307270|gb|EAX48187.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1]
          Length = 413

 Score = 36.2 bits (83), Expect = 7.9,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 27/178 (15%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + L+L   C   C  C+      +    V   +           ++    + F GG+PL+
Sbjct: 98  VWLELTASCNNRCLHCYATSGPCAGYDAVPHDRWLSLITE--ARQAGATAIQFIGGEPLL 155

Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214
               R Q++ +  R    + ++I    +         I+ + I+ +K+    + IA    
Sbjct: 156 YP--RWQELAQRARQDGYEFIEIFTNAT--------LIDDDCIKFVKD--NQINIATTIY 203

Query: 215 HPY-----EFS------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261
                     +       + +AA+ +L  AG+ L   S+++K   ++ E +  L    
Sbjct: 204 AANAAVHDRVTLNPGSFNQTMAAVRKLLAAGVPLRIASIIMKANEEEAENIMKLCEEL 261


>gi|329904141|ref|ZP_08273687.1| Transcriptional regulator [Oxalobacteraceae bacterium IMCC9480]
 gi|327548124|gb|EGF32841.1| Transcriptional regulator [Oxalobacteraceae bacterium IMCC9480]
          Length = 404

 Score = 36.2 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 11/93 (11%)

Query: 95  DRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----- 146
           ++++LK++  C + C +C+   R +     +  V+S +        I E  +  +     
Sbjct: 18  NQVILKIVQRCNLDCTYCYVYNRGDDSWKSRPPVISERVLLRLAERINEHCRRHQLSSFT 77

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY-IK--HVQ 176
           +   GG+PL++  +++Q +L  LR  I   HV+
Sbjct: 78  IELHGGEPLLIGKRKMQALLTLLRSRIDAAHVR 110


>gi|189461331|ref|ZP_03010116.1| hypothetical protein BACCOP_01981 [Bacteroides coprocola DSM 17136]
 gi|189431860|gb|EDV00845.1| hypothetical protein BACCOP_01981 [Bacteroides coprocola DSM 17136]
          Length = 432

 Score = 36.2 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150
             LK+   C   C +C    + G  K      ++    +  +  +          E+ + 
Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--KHVSRPMEEILDEVRLLVSEGVKEFQVIAQELTYY 195

Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
           G D  +   + L ++++ +  I  V+ +R H       P     EL + ++E 
Sbjct: 196 GVD--LYKKQMLPELIERMAEIPGVKWIRLH----YAYPAHFPKELFRVMREH 242


>gi|159043568|ref|YP_001532362.1| (dimethylallyl)adenosine tRNA methylthiotransferase
           [Dinoroseobacter shibae DFL 12]
 gi|229890517|sp|A8LSE7|MIAB_DINSH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|157911328|gb|ABV92761.1| RNA modification enzyme [Dinoroseobacter shibae DFL 12]
          Length = 437

 Score = 36.2 bits (83), Expect = 8.0,   Method: Composition-based stats.
 Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 5/93 (5%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
              L +   C  +C FC      G++  +  +++    A   ++    + E+   G +  
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPAARVLTEARDLVER--GVREITLLGQNVN 206

Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                 + L  ++  L  I  ++ +RF +  P 
Sbjct: 207 AYHGHARGLAGLIWDLAEIDGLERIRFTTSHPN 239


>gi|168187980|ref|ZP_02622615.1| heme biosynthesis [Clostridium botulinum C str. Eklund]
 gi|169294199|gb|EDS76332.1| heme biosynthesis [Clostridium botulinum C str. Eklund]
          Length = 456

 Score = 36.2 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF  E        V+S +  + A+ ++   S      EV   GG+PL
Sbjct: 99  LNVTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVVAHSGPRKNIEVDLFGGEPL 158


>gi|298695215|gb|ADI98437.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 381

 Score = 36.2 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 16/114 (14%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +   P E  + + ++    L  I             ++C + C  C             +
Sbjct: 10  IQNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56

Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +  +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 57  DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 109


>gi|237732895|ref|ZP_04563376.1| predicted protein [Mollicutes bacterium D7]
 gi|229384048|gb|EEO34139.1| predicted protein [Coprobacillus sp. D7]
          Length = 277

 Score = 36.2 bits (83), Expect = 8.1,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 3/62 (4%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           L     CP  C FC  R+     +G     K  E+    + E      +  TGG+P + +
Sbjct: 52  LITTQECPYNCPFCLERQNP--MEGNQDFKKQIESLKGVLSEHPNAR-LTITGGEPGLYT 108

Query: 159 HK 160
             
Sbjct: 109 DH 110


>gi|282880323|ref|ZP_06289037.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella timonensis CRIS 5C-B1]
 gi|281305825|gb|EFA97871.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Prevotella timonensis CRIS 5C-B1]
          Length = 386

 Score = 36.2 bits (83), Expect = 8.2,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 32/166 (19%)

Query: 98  LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-------AYI--------QEKS 142
           L   +  C   C +C       S     L  K  +A          Y+        ++  
Sbjct: 4   LYLHIPFCASRCIYCG----FYSTTNLSLRQKYVDALCQELRLRRDYLSDIETNLSEDTH 59

Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYI---KHVQILRFHSRV-PIVDPQRINPELIQ 198
            I  +   GG P  L+  +LQ++ + +  I    ++  +R    V    +P  I+P  ++
Sbjct: 60  LIRTIYIGGGTPSQLTPAQLQQIFEVIGSIYFNGNLSTMRSQCEVTLECNPDDISPSFVE 119

Query: 199 CLKEA-------GKPVYIAIHAN--HPYEFSEEAIAAISRLANAGI 235
            ++++       G   +     N  H    +E+   A++RL   G+
Sbjct: 120 FIEQSPINRISMGVQTFSNAQLNFLHRRHQAEDVATAVNRLREIGV 165


>gi|327312397|ref|YP_004327834.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola
           F0289]
 gi|326946389|gb|AEA22274.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola
           F0289]
          Length = 434

 Score = 36.2 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 39/186 (20%)

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKD--TEAALAYIQ-----------EKSQ 143
           L   +  C   C +C F   +    +G   S ++   +A    ++           E ++
Sbjct: 4   LYIHVPFCASRCIYCGFYSTVPSGGEGKGKSVEERYVDAMCHEMELRTDEEAASGGETAE 63

Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR-FHS-------RVPI-----VDPQ 190
           +  +   GG P  LS + L ++  T+  + H+   R   +         PI      +P 
Sbjct: 64  LTSIYLGGGTPSQLSFQSLHRLFHTIETVYHLPFRRDMGTDRRQGCAAAPIEVTMECNPD 123

Query: 191 RINPELIQCLKEAGKPVYIA---------IHANHPYEFSEEAIAAISRLANAGIILLSQS 241
            +  E  + L+                  +   H    + EA++A+ RL  AGI   + S
Sbjct: 124 DVTAEFARRLRSLPVNRISMGMQTFSDERLRFLHRRHTAAEAVSAVGRLREAGI--GNIS 181

Query: 242 V-LLKG 246
           V L+ G
Sbjct: 182 VDLMFG 187


>gi|212710494|ref|ZP_03318622.1| hypothetical protein PROVALCAL_01556 [Providencia alcalifaciens DSM
           30120]
 gi|212686914|gb|EEB46442.1| hypothetical protein PROVALCAL_01556 [Providencia alcalifaciens DSM
           30120]
          Length = 317

 Score = 36.2 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 11/61 (18%)

Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILA-------NLMRT--FVELRIKPYYLHH 273
               + RL   G  ++ +  L++G ND  + +         L +      + I PY  H 
Sbjct: 215 VRRNLERLMELGANVVMRMPLVRGYNDSFDAITGAIEYAMELSKRGNLNRIDILPY--HQ 272

Query: 274 P 274
            
Sbjct: 273 L 273


>gi|167745954|ref|ZP_02418081.1| hypothetical protein ANACAC_00649 [Anaerostipes caccae DSM 14662]
 gi|167654469|gb|EDR98598.1| hypothetical protein ANACAC_00649 [Anaerostipes caccae DSM 14662]
          Length = 472

 Score = 36.2 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 4/86 (4%)

Query: 93  YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y +RI+    L L + C   C +C         +   LS ++ +  +  +Q+       +
Sbjct: 80  YGNRIVMFAPLYLANYCVNGCVYCPYHYKNKHIRRKKLSQEEIKKEVIALQDMGHKRLAL 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
            TG DP+ +  + + + +KT+  IKH
Sbjct: 140 ETGEDPVNIPIEYVLESIKTIYGIKH 165


>gi|16124274|ref|NP_418838.1| molybdenum cofactor biosynthesis protein A [Caulobacter crescentus
           CB15]
 gi|221232957|ref|YP_002515393.1| molybdenum cofactor biosynthesis protein A [Caulobacter crescentus
           NA1000]
 gi|24212006|sp|Q9AC48|MOAA_CAUCR RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|13421106|gb|AAK22006.1| molybdenum cofactor biosynthesis protein A [Caulobacter crescentus
           CB15]
 gi|220962129|gb|ACL93485.1| molybdenum cofactor biosynthesis protein A [Caulobacter crescentus
           NA1000]
          Length = 349

 Score = 36.2 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 59/180 (32%), Gaps = 37/180 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-- 156
           + +   C + C +C    M    K  VL+ ++ +   +       + ++  TGG+PL+  
Sbjct: 36  VSVTDRCDLRCVYCMAEHMTFLPKAEVLTLEELDRLASTFVG-LGVRKLRLTGGEPLVRK 94

Query: 157 ------------LSHKRLQKVL-----KTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199
                       LS   L ++        L       + R   R   V    + P L + 
Sbjct: 95  GFIGLVARLSRHLSSGALDELTLTTNGSQLERYAS-DLARHGVRRINVSLDTLKPALFRA 153

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259
           L   G                   IA I     AG+ +   +V LK   D+   +  L++
Sbjct: 154 LTRGGD--------------VTRVIAGIDAAQAAGMTVKINAVALKH--DNAGEIPALIQ 197


>gi|75759721|ref|ZP_00739802.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228904932|ref|ZP_04068985.1| Radical SAM domain protein [Bacillus thuringiensis IBL 4222]
 gi|74492798|gb|EAO55933.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|228854707|gb|EEM99312.1| Radical SAM domain protein [Bacillus thuringiensis IBL 4222]
          Length = 468

 Score = 36.2 bits (83), Expect = 8.3,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 4/78 (5%)

Query: 93  YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIF 149
           Y   + L + H C + C +CF  +   +    ++S +  + A+ ++ E S      +V F
Sbjct: 97  YVKALCLNVAHTCNLSCEYCFASQGKYNGNRAIMSFEVGKRAIDFLLENSGNHRNLDVDF 156

Query: 150 TGGDPLILSHKRLQKVLK 167
            GG+PL+   K +++++ 
Sbjct: 157 FGGEPLMA-WKTVKQIVA 173


>gi|321313919|ref|YP_004206206.1| galactarate dehydratase [Bacillus subtilis BSn5]
 gi|320020193|gb|ADV95179.1| galactarate dehydratase [Bacillus subtilis BSn5]
          Length = 510

 Score = 36.2 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 10/89 (11%)

Query: 151 GGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209
           G D L L   R    +++++  +   +++R +SR  +  P     +L+  L+  G   + 
Sbjct: 226 GDDILSLQDHRGFAAMIQSILEMAEERLIRLNSRTRVSCP---VSDLVIGLQCGGSDAFS 282

Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILL 238
            + AN           A   L  AG  +L
Sbjct: 283 GVTAN------PAVGYAADLLVRAGATVL 305


>gi|282917222|ref|ZP_06324977.1| hypothetical protein SATG_01796 [Staphylococcus aureus subsp.
           aureus D139]
 gi|283771026|ref|ZP_06343917.1| radical SAM superfamily domain-containing protein [Staphylococcus
           aureus subsp. aureus H19]
 gi|282318849|gb|EFB49204.1| hypothetical protein SATG_01796 [Staphylococcus aureus subsp.
           aureus D139]
 gi|283459620|gb|EFC06711.1| radical SAM superfamily domain-containing protein [Staphylococcus
           aureus subsp. aureus H19]
          Length = 381

 Score = 36.2 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++  P E  + + ++    L  I             ++C + C  C             +
Sbjct: 10  IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56

Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +  +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 57  DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 109


>gi|221632343|ref|YP_002521564.1| radical SAM enzyme, Cfr family [Thermomicrobium roseum DSM 5159]
 gi|221156232|gb|ACM05359.1| radical SAM enzyme, Cfr family [Thermomicrobium roseum DSM 5159]
          Length = 379

 Score = 36.2 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 13/95 (13%)

Query: 222 EAIAAISR-LANAGIILLSQSVLLKGINDDPEILANLMRTFVEL----RIKPYYLHHPDL 276
           E +AA  R +A  G  +  + VL++ +NDD    A L R    L     + PY     + 
Sbjct: 264 ELLAACRRYVARTGRRVTFEYVLIEDVNDDERTAAELARRLRGLLCHVNLIPY-----NP 318

Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311
                 FR    E  +   ++ E+      P  + 
Sbjct: 319 TPAAPLFRRPGPERIERFRAVLER---YGIPATVR 350


>gi|188582088|ref|YP_001925533.1| MiaB-like tRNA modifying enzyme [Methylobacterium populi BJ001]
 gi|179345586|gb|ACB80998.1| MiaB-like tRNA modifying enzyme [Methylobacterium populi BJ001]
          Length = 410

 Score = 36.2 bits (83), Expect = 8.4,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 68/193 (35%), Gaps = 37/193 (19%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153
             R  + + + C   C FC      G      +   +  A +  I E     EV+ TG D
Sbjct: 128 HTRAFVPVQNGCDHRCTFCVIP--FGRGHSRSVPVAEAVAQVRRIVEHGG-REVVLTGVD 184

Query: 154 PLI------LSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
            L        S   L ++++T L  +  +  LR  S    +D    +PELI    E  + 
Sbjct: 185 -LTAYGRDLASDLSLGRLVRTILSEVPDLARLRLSS----IDSVEADPELIAAFAEESR- 238

Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266
             +  H +   +  ++ I  + R+                     + +  L RT  +LR 
Sbjct: 239 --LMPHVHLSLQAGDDLI--LKRMKRRHA--------------RADAIR-LCRTLRDLR- 278

Query: 267 KPYYLHHPDLAAG 279
            P  +   DL AG
Sbjct: 279 -PGLVFGADLIAG 290


>gi|313813065|gb|EFS50779.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL025PA1]
 gi|327330771|gb|EGE72517.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL097PA1]
          Length = 407

 Score = 36.2 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 22/125 (17%)

Query: 62  PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGS 120
           P            ++ + + +  P  G    Y        +  C   C +C F   ++ +
Sbjct: 6   PYPRITRRTMTHADNSLPELH--PADGPWSIY------LHVPFCASRCGYCDFNTYVLSA 57

Query: 121 QKGTV------LSSKDTEAALAYIQ-EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173
                       + ++ E A   +   +  +  + F GG P +LS  +L ++      I 
Sbjct: 58  MGDDAVAGYLDAAHQELELAADALGDAQPPVSTIFFGGGTPTMLSPVQLGEL------ID 111

Query: 174 HVQIL 178
           HV+ L
Sbjct: 112 HVRTL 116


>gi|289642406|ref|ZP_06474552.1| molybdenum cofactor biosynthesis protein A [Frankia symbiont of
           Datisca glomerata]
 gi|289507751|gb|EFD28704.1| molybdenum cofactor biosynthesis protein A [Frankia symbiont of
           Datisca glomerata]
          Length = 328

 Score = 36.2 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 41/222 (18%)

Query: 99  LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157
           + L   C + C +C   E +    +  +L+ ++    +     +  + EV  TGG+P  L
Sbjct: 16  VSLTDRCNLRCSYCMPAEGLAWLPRAGILTDEEIVRLVRIAVTRLGVDEVRLTGGEP-TL 74

Query: 158 SHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHAN 214
                 L   L  LR    + +      +  + P          L+ AG   V +++   
Sbjct: 75  RPGLVGLVARLARLRPRPQLSMTTNGIALVGMAPA---------LRAAGLDRVNVSLDTL 125

Query: 215 HPYEFSEEAIAAISRLANA-----------GIILLSQSVLLKGINDDPEILANLMRTFVE 263
            P  +         RLA+A            + +   +VLL+G+NDD     +L+R  + 
Sbjct: 126 RPGRYQALTRR--DRLADAQAGLAAVAAAGLVPVKVNAVLLRGVNDDEA--PDLLRWCLR 181

Query: 264 LRIKPYYLHHPDLAA-----GTSHF-RLTIEEGQKIVASLKE 299
                   +               + R  +  G +I+A L+ 
Sbjct: 182 RG------YQLRFIEQMPLDPQHSWDRAAMVTGAEILAGLRG 217


>gi|163741718|ref|ZP_02149108.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Phaeobacter gallaeciensis
           2.10]
 gi|161384891|gb|EDQ09270.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Phaeobacter gallaeciensis
           2.10]
          Length = 440

 Score = 36.2 bits (83), Expect = 8.5,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 9/97 (9%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
              L +   C  +C FC      G++  +  + +    A   ++    + E+   G +  
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRILREAQDLVER--GVREITLLGQNVN 206

Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                     K L +++  L  +  ++ +RF +  P 
Sbjct: 207 AYHGAGPNGDKTLAQLIWELDKVDGLERIRFTTSHPN 243


>gi|298708530|emb|CBJ49163.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 425

 Score = 36.2 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 20/95 (21%)

Query: 194 PELIQCLKEAGKPVYIAIHANHP---YEFSEEAIAAISRLANAGIILLSQS--------- 241
           P  I+ +K     +  ++HA             + +++ L +A   +L QS         
Sbjct: 257 PAAIRRMKGMPSRLAWSVHAATDDVRRLLVPTTVHSMAELRDAFAEVL-QSRRREHLFVE 315

Query: 242 -VLLKGINDDPE---ILANLMRTF-VELRI--KPY 269
            VL++G+ND PE    LA+L+R   +   I   PY
Sbjct: 316 VVLIEGMNDSPELARALASLLRPLPIRAGINLLPY 350


>gi|218288632|ref|ZP_03492909.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius
           LAA1]
 gi|218241289|gb|EED08464.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius
           LAA1]
          Length = 475

 Score = 36.2 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 50/158 (31%), Gaps = 30/158 (18%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C FC      G  +     +   +A       ++   E++ T   
Sbjct: 142 RSRANLKIQDGCNNFCTFCIIPRARGLIRSRKPENVVLQATK---LARAGYREIVLTGIH 198

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
               G D     + RL  +L  L  I     +R  S    ++   I+  L+  L  + K 
Sbjct: 199 TGGYGED---FENYRLADLLLDLERIDLPFRIRISS----IEASEIDDRLMDVLAAS-KK 250

Query: 207 VYIAIHA------------NHPYEFSEEAIAAISRLAN 232
           V   +H              H +  + E    +  L  
Sbjct: 251 VVPHLHIPLQAGSDPVLRRMHRHYTTAEYAEKLQELRR 288


>gi|163734559|ref|ZP_02141998.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter
           litoralis Och 149]
 gi|161392052|gb|EDQ16382.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter
           litoralis Och 149]
          Length = 426

 Score = 36.2 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 39/120 (32%), Gaps = 14/120 (11%)

Query: 74  REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSK 129
            ED   +    P      R P    L +   C  +C FC     R   V      VL   
Sbjct: 117 PEDKFEELKARPK---ARRAPS-AFLTVQEGCDKFCAFCVVPYTRGAEVSRPVTRVLDEA 172

Query: 130 D--TEAALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
               E  +  I    Q +      G D    + + L +++  L  I  ++ +RF +  P 
Sbjct: 173 RDLVERGVREITLLGQNVNAYHGAGADG---NEQTLAQLIWALNDIDGLERIRFTTSHPN 229


>gi|187929569|ref|YP_001900056.1| pyrroloquinoline quinone biosynthesis protein PqqE [Ralstonia
           pickettii 12J]
 gi|309781652|ref|ZP_07676386.1| coenzyme PQQ biosynthesis protein E [Ralstonia sp. 5_7_47FAA]
 gi|187726459|gb|ACD27624.1| coenzyme PQQ biosynthesis protein E [Ralstonia pickettii 12J]
 gi|308919627|gb|EFP65290.1| coenzyme PQQ biosynthesis protein E [Ralstonia sp. 5_7_47FAA]
          Length = 400

 Score = 36.2 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 12/107 (11%)

Query: 68  NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127
           N       D +     +P+ G     P  +L +L + CP++C FC    +  ++    LS
Sbjct: 4   NAAGSFEADSLLAPAATPMPGP----PLWLLAELTYRCPLHCAFCS-NPVDYTRHDQELS 58

Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174
           ++         +    + ++  +GG+PL+         L+TL    H
Sbjct: 59  TEQWCDVFTQARALGAV-QLGLSGGEPLLRKD------LETLVAHAH 98


>gi|189426248|ref|YP_001953425.1| MiaB-like tRNA modifying enzyme YliG [Geobacter lovleyi SZ]
 gi|238066235|sp|B3EAM2|RIMO_GEOLS RecName: Full=Ribosomal protein S12 methylthiotransferase RimO;
           Short=S12 MTTase; Short=S12 methylthiotransferase;
           AltName: Full=Ribosome maturation factor RimO
 gi|189422507|gb|ACD96905.1| MiaB-like tRNA modifying enzyme YliG [Geobacter lovleyi SZ]
          Length = 449

 Score = 36.2 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 41/116 (35%), Gaps = 16/116 (13%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDP 154
             LK+   C   C +C    + G  +   + +   + E  +        + E+I    D 
Sbjct: 153 AYLKIGEGCSNCCTYCVIPSLRGPYRSRPVEALVAEAERLVK-----GGVRELILVSQDI 207

Query: 155 L-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205
                 +     L  +++ L  I+ ++ +R         P  I+ ELI+  K   K
Sbjct: 208 TRYGSDMDDTSSLAGLIRRLAAIEDLKWIRL----LYAYPDGISDELIELFKTEPK 259


>gi|50842395|ref|YP_055622.1| coproporphyrinogen III oxidase [Propionibacterium acnes KPA171202]
 gi|282854145|ref|ZP_06263482.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes J139]
 gi|50839997|gb|AAT82664.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes KPA171202]
 gi|282583598|gb|EFB88978.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes J139]
          Length = 393

 Score = 36.2 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 14/89 (15%)

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTV------LSSKDTEAALAYIQ-EKSQIWEVIF 149
           +   +  C   C +C F   ++ +            + ++ E A   +   +  +  + F
Sbjct: 20  IYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHRELELAADALGDAQPPVSTIFF 79

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            GG P +LS  +L ++      I H++ L
Sbjct: 80  GGGTPTMLSPVQLGEL------IDHIRTL 102


>gi|46199876|ref|YP_005543.1| florfenicol resistance protein [Thermus thermophilus HB27]
 gi|81567593|sp|Q72HC1|RLMN_THET2 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|46197503|gb|AAS81916.1| florfenicol resistance protein [Thermus thermophilus HB27]
          Length = 355

 Score = 36.2 bits (83), Expect = 8.6,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 74/203 (36%), Gaps = 51/203 (25%)

Query: 93  YPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIW 145
           Y +R  + L  +  CP  C FC    +     G  L++ +    L  I         +I 
Sbjct: 95  YENRKTVCLSTMVGCPAGCTFCATGAL---GFGRNLTAAEILDQLLTIAYHQGLSPREIR 151

Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--- 201
            V+  G G+PL+     L+ VLK +R +        H +   + P+R+    +   K   
Sbjct: 152 NVVLMGMGEPLL----NLRNVLKAVRIM-------LHKKALALSPRRVTLSTVGIPKGIY 200

Query: 202 -----EAGKPVYIAIHA------------NHPY---EFSEEAIAAISRLANAGIILLSQS 241
                + G  + +++HA             H Y   E  E      ++         +  
Sbjct: 201 RLAEEDLGVRLALSLHAPDDETRRKIIPTAHRYPIAEIMEAVRHYHAKTKRRVTFEYT-- 258

Query: 242 VLLKGINDD---PEILANLMRTF 261
            LLKG+ND      +LA L++  
Sbjct: 259 -LLKGVNDHLWQARLLAKLLKGL 280


>gi|260888390|ref|ZP_05899653.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185]
 gi|330838294|ref|YP_004412874.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
 gi|260861926|gb|EEX76426.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185]
 gi|329746058|gb|AEB99414.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185]
          Length = 346

 Score = 35.9 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R L++  ++C   C +C  R      +   L S++        +       V+  G D  
Sbjct: 52  RGLIEFTNICRRSCFYCGLRRENERAERYRLRSQEIVRLAQNARGYGYRTVVLQGGEDGY 111

Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215
               +RL  +L+ +R +  V  L    R           E  + LKEAG   ++      
Sbjct: 112 WH-VERLAPILREIRALGLVITLSIGER---------TEEEYRALKEAGASRFLLRIETT 161

Query: 216 PYEF--------SEEAIAAI-SRLANAGIILLS--------QSV 242
             E         S EA  A  + L   G  + +        QSV
Sbjct: 162 DRELYERLDPGMSWEARRACLASLRALGYEVGTGSLVGLPGQSV 205


>gi|149202109|ref|ZP_01879082.1| tRNA-i(6)A37 modification enzyme MiaB [Roseovarius sp. TM1035]
 gi|149144207|gb|EDM32238.1| tRNA-i(6)A37 modification enzyme MiaB [Roseovarius sp. TM1035]
          Length = 440

 Score = 35.9 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 21/137 (15%)

Query: 73  EREDPIGDNNHSPLKGIVHRYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128
           + E PI D   +    + HR   R      L +   C  +C FC      G++  +  +S
Sbjct: 127 DTEFPIEDKFDT----LRHRPKARRGPTAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPAS 181

Query: 129 KDTEAALAYIQEKSQIWEVIFTGGD------PLILSHKRLQKVLKTLRYIKHVQILRFHS 182
           +  E A   ++    + E+   G +              L +++  L  I  ++ +RF +
Sbjct: 182 RVLEEARDLVER--GVREITLLGQNVNAYHGAGEGGDWGLARLVWALSEIDGLERIRFTT 239

Query: 183 RVPIVDPQRINPELIQC 199
             P      ++ +LI  
Sbjct: 240 SHPND----MDDDLIAA 252


>gi|88195773|ref|YP_500582.1| hypothetical protein SAOUHSC_02090 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|221141450|ref|ZP_03565943.1| hypothetical protein SauraJ_07398 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|87203331|gb|ABD31141.1| conserved hypothetical phage protein [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|302751749|gb|ADL65926.1| putative Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus
           str. JKD6008]
 gi|329728682|gb|EGG65112.1| YfkB-like domain protein [Staphylococcus aureus subsp. aureus
           21189]
          Length = 381

 Score = 35.9 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 16/114 (14%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           +   P E  + + ++    L  I             ++C + C  C             +
Sbjct: 10  IQNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56

Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +  +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 57  DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 109


>gi|304379061|ref|ZP_07361808.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|304342296|gb|EFM08188.1| radical SAM superfamily domain protein [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
          Length = 381

 Score = 35.9 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 16/115 (13%)

Query: 66  ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125
            ++  P E  + + ++    L  I             ++C + C  C             
Sbjct: 9   IIHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQT 55

Query: 126 LSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
           +  +  +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 56  VDPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 109


>gi|254521416|ref|ZP_05133471.1| lysophospholipase [Stenotrophomonas sp. SKA14]
 gi|219719007|gb|EED37532.1| lysophospholipase [Stenotrophomonas sp. SKA14]
          Length = 583

 Score = 35.9 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 27/60 (45%)

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
           R+  +  Q+++    +++ G   P  +LD+  G+G+  ++     +       + D  ++
Sbjct: 383 RVRGQHLQELLRDAAQRLRGQGTPVRVLDVAAGHGRYVLEALGQGEQRADRIVLRDFSDL 442


>gi|254467232|ref|ZP_05080643.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
           Y4I]
 gi|206688140|gb|EDZ48622.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium
           Y4I]
          Length = 440

 Score = 35.9 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 15/97 (15%), Positives = 34/97 (35%), Gaps = 9/97 (9%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153
              L +   C  +C FC      G++  +  + +    A   ++    + E+   G +  
Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRILREAQDLVER--GVREITLLGQNVN 206

Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
                       L +++  L  I  ++ +RF +  P 
Sbjct: 207 AYHGAGPNGDLTLAQLIWELDKIDGLERIRFTTSHPN 243


>gi|190576078|ref|YP_001973923.1| putative hydrolase [Stenotrophomonas maltophilia K279a]
 gi|190014000|emb|CAQ47640.1| putative hydrolase [Stenotrophomonas maltophilia K279a]
          Length = 583

 Score = 35.9 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 27/60 (45%)

Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343
           R+  +  Q+++    +++ G   P  +LD+  G+G+  ++     +       + D  ++
Sbjct: 383 RVRGQHLQELLRDAAQRLRGQGTPVRVLDVAAGHGRYVLEALGQGEQRADRIVLRDFSDL 442


>gi|332982414|ref|YP_004463855.1| hypothetical protein Mahau_1856 [Mahella australiensis 50-1 BON]
 gi|332700092|gb|AEE97033.1| protein of unknown function DUF512 [Mahella australiensis 50-1 BON]
          Length = 436

 Score = 35.9 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 14/88 (15%)

Query: 195 ELIQCLKEAGKPVYIAIHANHP--YEF------SEEAIAAISRLANAGIILLSQSVLLKG 246
           ++ +  K    P+Y++IHA  P    F      ++  +  + R     I++  Q VL  G
Sbjct: 134 DIDRITKMHISPLYVSIHAVDPKVRSFMLGIPETDNIMNILQRFKEHNIMVHGQMVLCPG 193

Query: 247 IN------DDPEILANLMRTFVELRIKP 268
           IN      D  + L  L  +   L + P
Sbjct: 194 INDGDVLDDSIKRLMELWPSLQSLAVVP 221


>gi|311899066|dbj|BAJ31474.1| putative molybdenum cofactor biosynthesis protein A [Kitasatospora
           setae KM-6054]
          Length = 346

 Score = 35.9 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 36/182 (19%)

Query: 93  YPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y  R +   + L   C + C +C   E +    K  +L+ ++    +A       + EV 
Sbjct: 23  YGRRAVDLRVSLTDRCNLRCTYCMPEEGLSWLGKPELLTDEEIVRLVALAVGTLGVREVR 82

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH----------VQILRFHSRV-------PIVDPQR 191
           FTGG+PL+     L  ++     ++           + + R    +         V    
Sbjct: 83  FTGGEPLL--RPGLVGIIAACAALEPRPEVSLTTNGIGLARIAPALRDAGVDRVNVSLDT 140

Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251
           ++P+    L    +         H       A A  + L      +   +VL++G+ND  
Sbjct: 141 LDPDTFATLTRRRR---------HQDVLDGLAAAEAAGLR----PVKLNAVLMRGVNDHE 187

Query: 252 EI 253
             
Sbjct: 188 AA 189


>gi|224368537|ref|YP_002602700.1| MoaA1 [Desulfobacterium autotrophicum HRM2]
 gi|223691253|gb|ACN14536.1| MoaA1 [Desulfobacterium autotrophicum HRM2]
          Length = 329

 Score = 35.9 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 65/180 (36%), Gaps = 23/180 (12%)

Query: 91  HRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
           HR+ + + + +   C + C +C             +L+ ++    +     K  I +V  
Sbjct: 10  HRHLNYLRVSITDRCNLRCLYCIPDGIFPMLSHEEILTYEEILRIVKT-GSKMGISKVRI 68

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPELIQC 199
           TGG+PL+   K     L  L  IK +  +   +   +++            RIN  L   
Sbjct: 69  TGGEPLV--RKGACDFLSRLSKIKGLLDISLTTNGVLLEKNIEQIKAAGIHRINVSLDTL 126

Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDP-EILANL 257
             +  K +             +     I     AG   +    V++KGINDD  E LA L
Sbjct: 127 QPKKYKQITRMNMF-------KRVWDGIMAAHAAGFSPIKLNVVVMKGINDDEIEDLARL 179


>gi|55981906|ref|YP_145203.1| ribosomal RNA large subunit methyltransferase N [Thermus
           thermophilus HB8]
 gi|81363686|sp|Q5SGZ3|RLMN_THET8 RecName: Full=Ribosomal RNA large subunit methyltransferase N;
           AltName: Full=23S rRNA m2A2503 methyltransferase
 gi|55773319|dbj|BAD71760.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 355

 Score = 35.9 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 74/203 (36%), Gaps = 51/203 (25%)

Query: 93  YPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIW 145
           Y +R  + L  +  CP  C FC    +     G  L++ +    L  I         +I 
Sbjct: 95  YENRKTVCLSTMVGCPAGCTFCATGAL---GFGRNLTAAEILDQLLTIAYHQGLSPREIR 151

Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--- 201
            V+  G G+PL+     L+ VLK +R +        H +   + P+R+    +   K   
Sbjct: 152 NVVLMGMGEPLL----NLRNVLKAVRIM-------LHKKALALSPRRVTLSTVGIPKGIY 200

Query: 202 -----EAGKPVYIAIHA------------NHPY---EFSEEAIAAISRLANAGIILLSQS 241
                + G  + +++HA             H Y   E  E      ++         +  
Sbjct: 201 RLAEEDLGVRLALSLHAPDDETRRKIIPTAHRYPIAEIMEAVRHYHAKTKRRVTFEYT-- 258

Query: 242 VLLKGINDD---PEILANLMRTF 261
            LLKG+ND      +LA L++  
Sbjct: 259 -LLKGVNDHLWQARLLAKLLKGL 280


>gi|151222027|ref|YP_001332849.1| hypothetical protein NWMN_1815 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|150374827|dbj|BAF68087.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
          Length = 381

 Score = 35.9 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%)

Query: 67  LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126
           ++  P E  + + ++    L  I             ++C + C  C             +
Sbjct: 10  IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56

Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
             +  +  L Y  + E   +  +  TGG+P + S K ++ V+K L    H + +
Sbjct: 57  DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 109


>gi|89053188|ref|YP_508639.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Jannaschia sp.
           CCS1]
 gi|122999629|sp|Q28UJ8|MIAB_JANSC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase
           miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase
 gi|88862737|gb|ABD53614.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Jannaschia sp. CCS1]
          Length = 462

 Score = 35.9 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 9/97 (9%)

Query: 96  RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIF 149
              L +   C  +C FC     R   V      +++      +  +  I    Q      
Sbjct: 172 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRSAERLMAEARDLVDRGVREITLLGQNVNAYH 231

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186
             GD        L ++++ +  I  +  +RF +  P 
Sbjct: 232 GAGDGGTWG---LARLIREMAKIDGLDRIRFTTSHPN 265


>gi|290956407|ref|YP_003487589.1| hypothetical protein SCAB_19011 [Streptomyces scabiei 87.22]
 gi|260645933|emb|CBG69024.1| putative hypothetical protein [Streptomyces scabiei 87.22]
          Length = 801

 Score = 35.9 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 42/116 (36%), Gaps = 16/116 (13%)

Query: 98  LLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----VIF 149
           ++K+   C + C  C+     +     +   +S +        I E +         V+ 
Sbjct: 12  VIKVHSRCDLACDHCYVYQHADQSWRGRPGTMSEETFRRTAERIAEHAAAHRLPRVHVVL 71

Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHV--QILRFHSRVPIVDPQRINPELIQCLKE 202
            GG+PL+   +RL+   + LR  +  V    LR  +        R++      L E
Sbjct: 72  HGGEPLLAGRERLRGYARALRSALDGVAALDLRMQTNGL-----RLDDAFCAMLVE 122


>gi|149919125|ref|ZP_01907609.1| hypothetical protein PPSIR1_35157 [Plesiocystis pacifica SIR-1]
 gi|149820055|gb|EDM79476.1| hypothetical protein PPSIR1_35157 [Plesiocystis pacifica SIR-1]
          Length = 261

 Score = 35.9 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 5/83 (6%)

Query: 96  RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155
           R     +  C + C +C       + +G   S    +A + +     Q   V+ TGG+PL
Sbjct: 37  RSSFVRVSGCNLRCVWCDTPRTSWAPEGERAS---LDALVDWCGAPGQPRHVVLTGGEPL 93

Query: 156 ILSHKRLQKVLKTLRYIKHVQIL 178
           +       ++   LR   H   +
Sbjct: 94  LFPAC--AELSARLRAAGHHLTI 114


>gi|326797578|ref|YP_004315397.1| molybdenum cofactor biosynthesis protein A [Sphingobacterium sp.
           21]
 gi|326548342|gb|ADZ76727.1| molybdenum cofactor biosynthesis protein A [Sphingobacterium sp.
           21]
          Length = 329

 Score = 35.9 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 24/173 (13%)

Query: 88  GIVHRYPDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146
           G +H Y   + + L   C + C +C        +    ++   + +       +   + +
Sbjct: 10  GRLHNY---LRISLTDNCNLRCFYCMPEEHYAFTPHAKLMQVHEIDQLAKIFVDH-GVTK 65

Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQI------LRFH---SRVPIVDPQRINPELI 197
           +  TGG+PL+        +++ L  +  V++      +R +    ++   +   IN  L 
Sbjct: 66  IRLTGGEPLVRKDAP--AIIEILSKLP-VELTMTTNGIRINDMLPQIVKANFSSINVSLD 122

Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250
              +E    +    + N            I  L    I      V++KG+NDD
Sbjct: 123 TLQREKFNRITRRDYFNR-------VRHNIDLLIKEQIHTKINVVVMKGLNDD 168


>gi|239987825|ref|ZP_04708489.1| hypothetical protein SrosN1_11005 [Streptomyces roseosporus NRRL
           11379]
          Length = 339

 Score = 35.9 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +LL L   CP+ C  C      G            E  +    E+++   V+ TGG+PL+
Sbjct: 17  LLLGLTRRCPLSCAHCSTG--SGPLTRQQPDPAQLERFVGSFTEENRPDVVMLTGGEPLL 74

Query: 157 LSHKRLQKVLKTLRY 171
           L    L + L TL  
Sbjct: 75  LPA--LAERLSTLAR 87


>gi|94265921|ref|ZP_01289648.1| Radical SAM [delta proteobacterium MLMS-1]
 gi|93453545|gb|EAT03950.1| Radical SAM [delta proteobacterium MLMS-1]
          Length = 343

 Score = 35.9 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 36/184 (19%)

Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH--KR 161
            C + C +C+    +  ++   LS  + +  +           V+  GG+PL+       
Sbjct: 36  ACNIRCIYCYAESGLPLEQELTLS--EIKQVVDQAAGLGARKVVVLGGGEPLLYPDIFTV 93

Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221
           L  +L          I    +         I P + + LKE  + V + +  N      +
Sbjct: 94  LDYILNKGMKAD---IFTNGT--------LITPAVARHLKE--REVAVVVKMNSRDAAVQ 140

Query: 222 EAIAAIS-----------RLANAGII-----LLSQSVLLKGINDDPEILANLMRTFVELR 265
           + +A               L   G       L  Q+++ +    +   L +L R      
Sbjct: 141 DLLAGCRGTFAAIEKGLAALREVGYPGDNLLLGVQTIVCRH---NYRELPDLWRWARRRN 197

Query: 266 IKPY 269
           I PY
Sbjct: 198 IIPY 201


>gi|299138990|ref|ZP_07032167.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
 gi|298599144|gb|EFI55305.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8]
          Length = 534

 Score = 35.9 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 29/176 (16%), Positives = 62/176 (35%), Gaps = 28/176 (15%)

Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILS 158
             CP +C FC          G     +  ++ +  I +  ++        D    P+ L+
Sbjct: 167 RGCPKHCSFCSVWR----TDGQQPRQRRFQSVIDEIVDLRRLGFRFIALADDNFYPVTLT 222

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-HPY 217
             RL +       +  +  +R          +R   +L++ L +  K +           
Sbjct: 223 DLRLAREQNNTAKVDELMAIRT---------ERF--QLMEELAKLPKDMVFFTQITMEAG 271

Query: 218 EFSEEAIAAISRLANAGIILLSQSVL---LKGI----NDDPEILANLMRTFVELRI 266
           E   E + A+ +    G ++  ++V    LK +    N   + LA  ++TF +  +
Sbjct: 272 E-DGEYLDAMRKANIKGALVGVEAVTPEGLKAVFKDFNYSGDALAKQLQTFKKHGV 326


>gi|239941362|ref|ZP_04693299.1| hypothetical protein SrosN15_10231 [Streptomyces roseosporus NRRL
           15998]
 gi|291444804|ref|ZP_06584194.1| predicted protein [Streptomyces roseosporus NRRL 15998]
 gi|291347751|gb|EFE74655.1| predicted protein [Streptomyces roseosporus NRRL 15998]
          Length = 351

 Score = 35.9 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           +LL L   CP+ C  C      G            E  +    E+++   V+ TGG+PL+
Sbjct: 17  LLLGLTRRCPLSCAHCSTG--SGPLTRQQPDPAQLERFVGSFTEENRPDVVMLTGGEPLL 74

Query: 157 LSHKRLQKVLKTLRY 171
           L    L + L TL  
Sbjct: 75  LPA--LAERLSTLAR 87


>gi|72161103|ref|YP_288760.1| hypothetical protein Tfu_0699 [Thermobifida fusca YX]
 gi|71914835|gb|AAZ54737.1| hypothetical protein Tfu_0699 [Thermobifida fusca YX]
          Length = 306

 Score = 35.9 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 15/91 (16%), Positives = 34/91 (37%), Gaps = 17/91 (18%)

Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180
               +   +DT+   A + E +++                   + ++ L     V+  R 
Sbjct: 168 DFDVLPGREDTQRIAALLVEHARMTP-----------------RFIEYLLRHPQVRDARG 210

Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211
            S V +  P+ +  ++   L+  G+PV +A 
Sbjct: 211 RSTVVVCSPEHLAADVFARLRAYGRPVVVAT 241


>gi|323140819|ref|ZP_08075734.1| iron-only hydrogenase maturation rSAM protein HydG
           [Phascolarctobacterium sp. YIT 12067]
 gi|322414701|gb|EFY05505.1| iron-only hydrogenase maturation rSAM protein HydG
           [Phascolarctobacterium sp. YIT 12067]
          Length = 471

 Score = 35.9 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 93  YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y +RI+L       + C  +C +C             L+  +  A +  +Q+       +
Sbjct: 80  YGNRIVLFAPLYLSNYCINHCVYCPYHATNKHIGRKKLTQDEVRAEVIALQDMGHKRLAL 139

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
             G DP+    + +   +KT+  IKH
Sbjct: 140 EAGEDPVNNPIEYILDCIKTIYSIKH 165


>gi|332186015|ref|ZP_08387761.1| molybdenum cofactor biosynthesis protein A [Sphingomonas sp. S17]
 gi|332013830|gb|EGI55889.1| molybdenum cofactor biosynthesis protein A [Sphingomonas sp. S17]
          Length = 339

 Score = 35.9 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 26/166 (15%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C + CR+C   +M    +  +LS  +          +  +  +  +GG+PL+  
Sbjct: 27  ISVTDRCDLRCRYCMAEQMTFLPRAKLLSLDEIAIIAERFIAR-GVTRIRLSGGEPLVRR 85

Query: 159 HKRLQKVLKTL-----RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212
              +  +++ L       +  + +    +R+          E    L  AG + + +++ 
Sbjct: 86  D--VADLVRRLGTHVGHGLDELTMTTNGTRL---------AEHADTLASAGIRRINVSLD 134

Query: 213 ANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDD 250
           +  P  F          + I  I    +AG+++    V LKG+N+D
Sbjct: 135 SRDPERFRYITRHGDVGQVIHGILSARDAGLMIKINMVALKGLNED 180


>gi|322508770|gb|ADX04224.1| Molybdopterin biosynthesis, protein A [Acinetobacter baumannii
           1656-2]
 gi|323518373|gb|ADX92754.1| molybdenum cofactor biosynthesis protein [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 346

 Score = 35.9 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 15/160 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C         K  +LS +       ++ ++  I  +  TGG+PL+  
Sbjct: 29  ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCHFMVQQ-GIQSIRITGGEPLM-- 85

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
            + +   ++ L+ +K + + R      +        +  + LK+AG   + I++ +  P 
Sbjct: 86  RQGIVHFIRDLQSLKSLGLKRIS----MTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPV 141

Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
              E +    E  +  I      G+      VL+K  NDD
Sbjct: 142 QFKELTKKKLEPVLEGIQAAKEVGLPFKINCVLMKDRNDD 181


>gi|292656271|ref|YP_003536168.1| coenzyme PQQ synthesis protein E-like protein [Haloferax volcanii
           DS2]
 gi|291370056|gb|ADE02283.1| coenzyme PQQ synthesis protein E homolog [Haloferax volcanii DS2]
          Length = 396

 Score = 35.9 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 90  VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149
             R P  ++ ++   C + C  C R +   ++    L++ + +  L   +E      V+ 
Sbjct: 40  TSRRPFVLIWEVTQACDLACDHC-RADATPARHPDELTTAEGKRLLDQAREFGPGQLVVL 98

Query: 150 TGGDPLILSH 159
           +GGDPL  S 
Sbjct: 99  SGGDPLARSD 108


>gi|260554717|ref|ZP_05826938.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           ATCC 19606]
 gi|260411259|gb|EEX04556.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           ATCC 19606]
          Length = 346

 Score = 35.9 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 15/160 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C         K  +LS +       ++ ++  I  +  TGG+PL+  
Sbjct: 29  ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCHFMVQQ-GIESIRITGGEPLM-- 85

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
            + +   ++ L+ +K + + R      +        +  + LK+AG   + I++ +  P 
Sbjct: 86  RQGIVHFIRDLQSLKSLGLKRIS----MTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPV 141

Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
              E +    E  +  I      G+      VL+K  NDD
Sbjct: 142 QFKELTKKKLEPVLEGIQAAKEVGLPFKINCVLMKDRNDD 181


>gi|304317387|ref|YP_003852532.1| biotin and thiamin synthesis associated [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778889|gb|ADL69448.1| biotin and thiamin synthesis associated [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 466

 Score = 35.9 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 6/112 (5%)

Query: 65  EELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVG 119
           EE  +L    +D I +  +   + I  + Y +RI+    L + + C   CR+C  +    
Sbjct: 45  EEAAVLLNLDDDEILEEMYKVARYIKEQIYGNRIVIFAPLYISNYCVNNCRYCGYKH-SN 103

Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171
            Q+   L+  +    +  ++E       +  G DP+      +  V+KT+  
Sbjct: 104 EQERKKLTMDEVRREIEILEEMGHKRLAVEAGEDPVNCPIDYVLDVIKTIYD 155


>gi|225874701|ref|YP_002756160.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225792341|gb|ACO32431.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 398

 Score = 35.9 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 40/189 (21%)

Query: 99  LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDT----EAA------LAYIQEKSQIWE 146
           +     C   CR+C+ R        +      ++     +AA      L  ++   +I  
Sbjct: 76  VNPYRGCEFACRYCYARYTHEFLEMRDPAQFEREIYVKQQAAWLLRRDLHQVKAGEEI-- 133

Query: 147 VIFTGGDPLILSHKRL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203
            I T  DP     +R+   + +L+ L   +  +I        +     I  + I  LKE 
Sbjct: 134 AIGTATDPYQPMERRMGVTRSLLEVLAEHRGYEI------GIVTKSALITRD-IDVLKEV 186

Query: 204 GKPVYIAIHAN------HPYEF------SEEAI-AAISRLANAGII--LLSQSVLLKGIN 248
            +   + +H        H            +     + RL  AG++  +L+ S LL G+ 
Sbjct: 187 ARHNRLVLHVTITTPEVHLARILEPRAPRPDIRFETVRRLREAGLMAGILN-SPLLPGLT 245

Query: 249 DDPEILANL 257
           D+   L  +
Sbjct: 246 DNAAALHRM 254


>gi|31544373|ref|NP_852951.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str.
           R(low)]
 gi|31541217|gb|AAP56519.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str.
           R(low)]
 gi|284930415|gb|ADC30354.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str.
           R(high)]
          Length = 348

 Score = 35.9 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 44/167 (26%)

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQ----EKSQIWEVIFTGG 152
           L   L +C   C FC F+RE++          K  +  +  I+       Q   +   GG
Sbjct: 5   LYIHLPLCQKICTFCDFKRELI----DRHNPKKVVQDLIDEIERKQFSDEQFSSIYLGGG 60

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSR----VPIVDPQRINPELIQCLKE-----A 203
            P +   + L   L  ++         + ++        +P  +     Q LK+     A
Sbjct: 61  TPNVFDDELLDYFLSKIKK--------YAAKKCEFTIECNPDLVTKSQAQILKKNLVNRA 112

Query: 204 GKPVYIA----------IH-ANHPYEFSEEAIAAISRLANAGIILLS 239
              + I            H  NH YE       A+  L +AGI  ++
Sbjct: 113 SVGIQIVNNKILKYLNRTHDINHCYE-------AMQNLYDAGITNIN 152


>gi|119387052|ref|YP_918107.1| radical SAM domain-containing protein [Paracoccus denitrificans
           PD1222]
 gi|119377647|gb|ABL72411.1| Radical SAM domain protein [Paracoccus denitrificans PD1222]
          Length = 413

 Score = 35.9 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 12/72 (16%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--------KDTEAALAYIQEKSQIWEVI 148
           +++K+   C + C +C+     G  +               + EA L  I     +  ++
Sbjct: 11  LIVKVAERCNIACTYCY--FFFGGDESHKFHPPYVNEETAAEIEAFLDRITADGAVENLM 68

Query: 149 --FTGGDPLILS 158
             F GG+P++  
Sbjct: 69  IYFHGGEPMMAP 80


>gi|258511464|ref|YP_003184898.1| RNA modification enzyme, MiaB family [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257478190|gb|ACV58509.1| RNA modification enzyme, MiaB family [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 497

 Score = 35.9 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 20/147 (13%)

Query: 73  EREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131
           E  D   +     P    + +   R  + + + C  +C +C     +      V  S+  
Sbjct: 180 EVWDNAPETVEDWPK---LRKDRVRAWVNVQYGCNKFCTYC-----IVPYTRGVERSRLP 231

Query: 132 EAALAYIQE--KSQIWEVIFTG---GDPLI-LSHKRLQKVLKTLRYIKHVQILRFHSRVP 185
           E  L  + E  +    ++   G    D  + L      ++L+ +  +  V  +RF +   
Sbjct: 232 EDVLREVAELVQEGYQDITLLGQNVNDYGVDLGTTNFARLLRQVNAVPGVGWIRFTTS-- 289

Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIH 212
             +P     ELI  + E+ + V   IH
Sbjct: 290 --NPWNFTDELIDAIAES-ENVVEHIH 313


>gi|118575403|ref|YP_875146.1| thiamine biosynthesis enzyme [Cenarchaeum symbiosum A]
 gi|118193924|gb|ABK76842.1| thiamine biosynthesis enzyme [Cenarchaeum symbiosum A]
          Length = 368

 Score = 35.9 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%)

Query: 95  DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154
           + I+L   +VC   C+FC      G ++   L+  + EA +   +E  +I +V+  GG  
Sbjct: 62  NNIILNYTNVCITDCKFCAFYRSPGHEEAYTLTLDEIEARVKTAREMFKITQVLIQGG-- 119

Query: 155 LILSHKRLQKVLKTLRYI 172
                 +L+      R I
Sbjct: 120 -HNPKLKLEYYEDAFRMI 136


>gi|114800325|ref|YP_762198.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Hyphomonas neptunium ATCC
           15444]
 gi|114740499|gb|ABI78624.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Hyphomonas neptunium ATCC
           15444]
          Length = 425

 Score = 35.9 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 24/145 (16%), Positives = 55/145 (37%), Gaps = 15/145 (10%)

Query: 77  PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136
            + +     + G+  R   R  +++ + C   C FC      G      + + +  A + 
Sbjct: 125 SVRETAAHLIDGMEGR--ARAYVQVQNGCDHRCTFCIIP--YGRGNSRSVPAGEVVAQVR 180

Query: 137 YIQEKSQIWEVIFTGGD----PLILS-HKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQ 190
            +      +EV+ TG D       L     L  +++ +   +  ++ LR  S +  ++  
Sbjct: 181 ALAASGH-YEVVLTGVDLTSWGADLPGTPELGNLVQRILKLVPELRALRI-SSIDAIE-- 236

Query: 191 RINPELIQCLKEAGKPVYIAIHANH 215
            ++  LI+ L +     Y+ +   H
Sbjct: 237 -MDDALIEALADPRVAPYLHLSLQH 260


>gi|15889001|ref|NP_354682.1| molybdenum cofactor biosynthesis protein A [Agrobacterium
           tumefaciens str. C58]
 gi|24211986|sp|Q8UER0|MOAA_AGRT5 RecName: Full=Molybdenum cofactor biosynthesis protein A
 gi|15156789|gb|AAK87467.1| molybdenum cofactor biosynthesis protein A [Agrobacterium
           tumefaciens str. C58]
          Length = 349

 Score = 35.9 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 5/78 (6%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C    M    K  +L+ ++ +   +       + ++  TGG+PL+  
Sbjct: 34  VSVTDRCDFRCTYCMSEHMTFLPKKDLLTLEELDRLCSVFI-TRGVRKLRLTGGEPLV-- 90

Query: 159 HKRLQKVLKTLRYIKHVQ 176
            K +  +++ L    HVQ
Sbjct: 91  RKNIMSLVRNLGR--HVQ 106


>gi|332873937|ref|ZP_08441877.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           6014059]
 gi|332737923|gb|EGJ68810.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           6014059]
          Length = 344

 Score = 35.9 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 15/160 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C         K  +LS +       ++ ++  I  +  TGG+PL+  
Sbjct: 27  ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCHFMVQQ-GIQSIRITGGEPLM-- 83

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
            + +   ++ L+ +K + + R      +        +  + LK+AG   + I++ +  P 
Sbjct: 84  RQGIVHFIRDLQSLKSLGLKRIS----MTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPV 139

Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
              E +    E  +  I      G+      VL+K  NDD
Sbjct: 140 QFKELTKKKLEPVLEGIQAAKEVGLPFKINCVLMKDRNDD 179


>gi|314923123|gb|EFS86954.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL001PA1]
 gi|314966890|gb|EFT10989.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL082PA2]
 gi|314981234|gb|EFT25328.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL110PA3]
 gi|315091802|gb|EFT63778.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL110PA4]
 gi|315093189|gb|EFT65165.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL060PA1]
 gi|315103305|gb|EFT75281.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL050PA2]
 gi|315105512|gb|EFT77488.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL030PA1]
 gi|327327714|gb|EGE69490.1| putative oxygen-independent coproporphyrinogen III oxidase
           [Propionibacterium acnes HL103PA1]
          Length = 397

 Score = 35.9 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 14/89 (15%)

Query: 98  LLKLLHVCPVYCRFC-FRREMVGSQKGTV------LSSKDTEAALAYIQ-EKSQIWEVIF 149
           +   +  C   C +C F   ++ +            + ++ E A   +   +  +  + F
Sbjct: 24  IYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHRELELAADALGDAQPPVSTIFF 83

Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178
            GG P +LS  +L ++      I H++ L
Sbjct: 84  GGGTPTMLSPVQLGEL------IDHIRTL 106


>gi|331269245|ref|YP_004395737.1| Radical SAM domain-containing protein [Clostridium botulinum
           BKT015925]
 gi|329125795|gb|AEB75740.1| Radical SAM domain protein [Clostridium botulinum BKT015925]
          Length = 456

 Score = 35.9 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF  E        V+S +  + A+ ++   S      EV   GG+PL
Sbjct: 99  LNVTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVIAHSGPRKNIEVDLFGGEPL 158


>gi|253682419|ref|ZP_04863216.1| heme biosynthesis [Clostridium botulinum D str. 1873]
 gi|253562131|gb|EES91583.1| heme biosynthesis [Clostridium botulinum D str. 1873]
          Length = 456

 Score = 35.9 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF  E        V+S +  + A+ ++   S      EV   GG+PL
Sbjct: 99  LNVTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVIAHSGPRKNIEVDLFGGEPL 158


>gi|118444426|ref|YP_877912.1| Heme biosynthesis [Clostridium novyi NT]
 gi|118134882|gb|ABK61926.1| Heme biosynthesis [Clostridium novyi NT]
          Length = 431

 Score = 35.9 bits (82), Expect = 9.6,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155
           L + H C + C++CF  E        V+S +  + A+ ++   S      EV   GG+PL
Sbjct: 74  LNVTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVIAHSGPRKNIEVDLFGGEPL 133


>gi|297531162|ref|YP_003672437.1| coproporphyrinogen dehydrogenase [Geobacillus sp. C56-T3]
 gi|297254414|gb|ADI27860.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. C56-T3]
          Length = 519

 Score = 35.9 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 21/164 (12%)

Query: 78  IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALA 136
           I D   + +  +     +  +   +  CP  C +C        +  G   S     A L 
Sbjct: 177 IVDRQLTVVPDLYDLAHEVSIYIGIPFCPTKCAYCT---FPAYAINGRQGSVDAFLAGLH 233

Query: 137 Y--------IQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPI 186
           Y        ++E+  +I  + + GG P  ++   + ++   +  +   V  +R  + V  
Sbjct: 234 YEMEAVGRFLRERGIRITTIYYGGGTPTSITADEMDRLYAHMYDVFPDVDRVREIT-VEA 292

Query: 187 VDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229
             P  I PE ++ LK+     + I      P  + +E + AI R
Sbjct: 293 GRPDTITPEKLEVLKKWRIDRISIN-----PQSYIQETLKAIGR 331


>gi|239501595|ref|ZP_04660905.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii
           AB900]
          Length = 343

 Score = 35.9 bits (82), Expect = 9.7,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 15/160 (9%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158
           + +   C   C +C         K  +LS +       ++ ++  I  +  TGG+PL+  
Sbjct: 26  ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCHFMVQQ-GIESIRITGGEPLM-- 82

Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216
            + +   ++ L+ +K + + R      +        +  + LK+AG   + I++ +  P 
Sbjct: 83  RQGIVHFIRDLQSLKSLGLKRIS----MTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPV 138

Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250
              E +    E  +  I      G+      VL+K  NDD
Sbjct: 139 QFKELTKKKLEPVLEGIQAAKEVGLPFKINCVLMKDRNDD 178


>gi|307130560|ref|YP_003882576.1| molybdopterin biosynthesis protein A [Dickeya dadantii 3937]
 gi|306528089|gb|ADM98019.1| molybdopterin biosynthesis protein A [Dickeya dadantii 3937]
          Length = 329

 Score = 35.9 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 33/222 (14%), Positives = 73/222 (32%), Gaps = 46/222 (20%)

Query: 99  LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVIFTGG 152
           L +  VC   C +C    +    +    +      +L  I+            +V  TGG
Sbjct: 18  LSITDVCNFRCTYC----LPDGYQPNGATPHRFL-SLDEIRRVGRAFADLGTEKVRLTGG 72

Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212
           +P  L    +  ++  +R    ++ L         +  R+  ++    +EAG    + + 
Sbjct: 73  EP-SLRRDFVD-IIAAIRENPAIRTL-----AVTTNGYRLARDVASW-REAGLT-ALNVS 123

Query: 213 ANH--PYEFSE-----EAIAAISRLANAGI----ILLSQSVLLKGINDDPEILANLMRTF 261
            +   P +F       +    +  +  A       +   +VL++ IND      +L    
Sbjct: 124 VDSLDPRQFHAITGQDKFRQVMDGIDAAFANGFRRVKVNTVLMRDINDS-----SLHTFL 178

Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303
             +R +P                    +G+++    +  +SG
Sbjct: 179 DWIRTRP---IQLRFIELME-----TGDGREMFR--RHHVSG 210


>gi|258511959|ref|YP_003185393.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|257478685|gb|ACV59004.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 471

 Score = 35.9 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 50/158 (31%), Gaps = 30/158 (18%)

Query: 94  PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150
             R  LK+   C  +C FC      G  +     +   +A       ++   E++ T   
Sbjct: 142 RSRANLKIQDGCNNFCTFCIIPRARGLIRSRKPENVVLQATK---LARAGYREIVLTGIH 198

Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206
               G D     + RL  +L  L  I     +R  S    ++   I+  L+  L  + K 
Sbjct: 199 TGGYGED---FENYRLADLLLDLERIDLPFRIRISS----IEASEIDDRLMDVLAAS-KK 250

Query: 207 VYIAIHA------------NHPYEFSEEAIAAISRLAN 232
           V   +H              H +  + E    +  L  
Sbjct: 251 VVPHLHIPLQAGSDPVLRRMHRHYTTAEYAEKLRELRR 288


>gi|218261905|ref|ZP_03476578.1| hypothetical protein PRABACTJOHN_02249 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223699|gb|EEC96349.1| hypothetical protein PRABACTJOHN_02249 [Parabacteroides johnsonii
           DSM 18315]
          Length = 431

 Score = 35.9 bits (82), Expect = 9.8,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 22/123 (17%)

Query: 95  DRIL--------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--- 143
           DR+L        LK+   C   C +C      G  +   +  ++ E  +  + ++     
Sbjct: 128 DRVLTTPRHYAYLKIAEGCDRTCSYCAIPISTGRYQ--SIPMEEIEKEVRLLVKQGVKEF 185

Query: 144 ---IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200
                ++ + G D  +     L ++++ +  I  V+ +R H   P   P     +L++ +
Sbjct: 186 QVIAQDLTYYGLD--LYKRHALPELVERISDIPGVEWIRLHYGYPSHFPY----DLLRVM 239

Query: 201 KEA 203
           +E 
Sbjct: 240 RER 242


>gi|308068323|ref|YP_003869928.1| Fe-S oxidoreductase [Paenibacillus polymyxa E681]
 gi|305857602|gb|ADM69390.1| Predicted Fe-S oxidoreductase [Paenibacillus polymyxa E681]
          Length = 376

 Score = 35.9 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 18/122 (14%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
           + + + H+C + C  C   +M+  ++   L     +  L  + E   +  +  TGG+P +
Sbjct: 36  VEMTVTHLCNMRCEHCAVGDMLVMKEAPFLP---LDLMLKRLDEVEHLETISITGGEPAL 92

Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----YIAIH 212
           L  K + +V+  L      + +R           +IN  L   ++   K +     + I 
Sbjct: 93  L-DKTVDEVIVPLLKYAKERGVR----------SQINSNLTLDIRRYEKMLPYLDVMHIS 141

Query: 213 AN 214
            N
Sbjct: 142 FN 143


>gi|269837718|ref|YP_003319946.1| hypothetical protein Sthe_1690 [Sphaerobacter thermophilus DSM
           20745]
 gi|269786981|gb|ACZ39124.1| protein of unknown function DUF512 [Sphaerobacter thermophilus DSM
           20745]
          Length = 470

 Score = 35.9 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 24/139 (17%)

Query: 194 PELIQCLKEAGKPVYIAIHANHPYEF------SEEAIAAI---SRLANAGIILLSQSVLL 244
            +  +  ++   P+ +++HA +P E       +  A   +   +RL   GI   +Q VL 
Sbjct: 144 EDWQRIEEQRISPINVSVHATNP-ELRVALVGNPRAAQIMEDLARLERIGIDYNAQLVLC 202

Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF-------RLTIEEGQKIVASL 297
            GIND PE +   +R  + L   P+ L    +  G S F       R+ +      + SL
Sbjct: 203 PGINDGPE-MDRTIRDLISLG--PHLLSIAAVPVGLSKFGQERQSRRVRLSRTC--MRSL 257

Query: 298 KEKISGLCQPFYILDLPGG 316
              +  L    Y  +   G
Sbjct: 258 PGAL--LDIRRYTPEEAEG 274


>gi|227873762|ref|ZP_03991991.1| thiamine biosynthesis protein ThiH [Oribacterium sinus F0268]
 gi|227840378|gb|EEJ50779.1| thiamine biosynthesis protein ThiH [Oribacterium sinus F0268]
          Length = 512

 Score = 35.9 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 4/86 (4%)

Query: 93  YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148
           Y +RI+L       + C   C +C             LS ++    +  +Q+       +
Sbjct: 120 YGNRIVLFAPLYLSNYCVNGCVYCPYHAKNKDIARRKLSQEEIRKEVIALQDMGHKRLAL 179

Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174
             G DP+    + + + +KT+  I H
Sbjct: 180 EAGEDPVHNPIEYILESIKTIYSIHH 205


>gi|226940122|ref|YP_002795195.1| ChuW [Laribacter hongkongensis HLHK9]
 gi|226715048|gb|ACO74186.1| ChuW [Laribacter hongkongensis HLHK9]
          Length = 452

 Score = 35.9 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 94  PDRILLKL-LHVCPVYCRFC--FRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVI 148
           P+R L+ + +  C  +C FC  +R           +     D EA  A       I  V 
Sbjct: 53  PERALVYVHIPFCANHCVFCGFYRNGWNAGLAEQYVDRLVADIEAEAARRPAGGSIAAVY 112

Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171
             GG P +L   +L ++L+TLR 
Sbjct: 113 LGGGTPTLLPAGQLTRLLQTLRR 135


>gi|225874258|ref|YP_002755717.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
 gi|225791949|gb|ACO32039.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196]
          Length = 226

 Score = 35.9 bits (82), Expect = 9.9,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 58/160 (36%), Gaps = 23/160 (14%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156
            +   L  C + C +C          G   S  +    LA I+  + +  V FTGG+PL 
Sbjct: 21  CIFVRLAGCNLRCSWCDSEYTFTG--GEAFSDDEI---LARIEALAPVRLVEFTGGEPL- 74

Query: 157 LSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIVDPQ---RINPELIQCLKEAGKPVYIAIH 212
           L  K+L   ++ L    +  ++     R     P    +I         EAGK +   + 
Sbjct: 75  LQAKQLIPFMERLLAAGYELMIETSGERPLREVPAAVHKIVDVKCPGSGEAGKFLMENLE 134

Query: 213 ANHPY-------------EFSEEAIAAISRLANAGIILLS 239
              P              EF+ E + A +    AG ILLS
Sbjct: 135 FLTPRDEVKFVIADRADYEFAREFLRAHALDRKAGQILLS 174


>gi|258516358|ref|YP_003192580.1| RNA modification enzyme, MiaB family [Desulfotomaculum acetoxidans
           DSM 771]
 gi|257780063|gb|ACV63957.1| RNA modification enzyme, MiaB family [Desulfotomaculum acetoxidans
           DSM 771]
          Length = 435

 Score = 35.9 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 13/123 (10%)

Query: 96  RILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151
           R  LK+   C  +C +C     R  +   Q   VL+  ++  A  +   K  +   I TG
Sbjct: 145 RAYLKIQEGCRNFCSYCIIPYARGPLRSRQPEAVLNEAESLLAAGF---KEIVLTGIQTG 201

Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210
              + L  K  L  +++ L  I  +  LR  S    ++P  ++PELI+ +    K     
Sbjct: 202 AYGVDLPAKTSLAAIVEKLLRISGLSRLRLSS----IEPNDLSPELIELIL-HSKIFCPH 256

Query: 211 IHA 213
           +H 
Sbjct: 257 LHI 259


>gi|167644273|ref|YP_001681936.1| radical SAM domain-containing protein [Caulobacter sp. K31]
 gi|167346703|gb|ABZ69438.1| Radical SAM domain protein [Caulobacter sp. K31]
          Length = 481

 Score = 35.9 bits (82), Expect = 10.0,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 57/179 (31%), Gaps = 47/179 (26%)

Query: 97  ILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYI-QEKSQIWEVIFTGGD 153
            +L++   C + C  CF     GS           + E  L  I   + +   V  +GG+
Sbjct: 113 AILEINEACNLTCPVCF----AGSSTSLDAHRPLAEVERMLDVIVASEGEPDLVQLSGGE 168

Query: 154 PLILSHKRLQKVLKTLRY--IKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPV 207
           P +    +  ++L   R   I+H+ I    LR                  + L       
Sbjct: 169 PTLHP--QFFEILSAARARPIRHLMINTNGLRIAREA----------GFAERLATYMPRF 216

Query: 208 YIAIHANHPYEFSEEAIAAISRLANAG-IILLSQS---------------VLLKGINDD 250
            + +              A+ +L  A  + + +Q+                L KG+NDD
Sbjct: 217 EVYLQF------DSLKRDALMQLRGADLVKVRTQALEALERNNIPTTLVVTLKKGVNDD 269


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.313    0.170    0.550 

Lambda     K      H
   0.267   0.0520    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,062,558,564
Number of Sequences: 14124377
Number of extensions: 416722348
Number of successful extensions: 1107036
Number of sequences better than 10.0: 4450
Number of HSP's better than 10.0 without gapping: 2161
Number of HSP's successfully gapped in prelim test: 3541
Number of HSP's that attempted gapping in prelim test: 1097318
Number of HSP's gapped (non-prelim): 6662
length of query: 352
length of database: 4,842,793,630
effective HSP length: 140
effective length of query: 212
effective length of database: 2,865,380,850
effective search space: 607460740200
effective search space used: 607460740200
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.0 bits)
S2: 82 (35.9 bits)