BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254781065|ref|YP_003065478.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus str. psy62] (352 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254781065|ref|YP_003065478.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040742|gb|ACT57538.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 352 Score = 721 bits (1861), Expect = 0.0, Method: Compositional matrix adjust. Identities = 352/352 (100%), Positives = 352/352 (100%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF Sbjct: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS Sbjct: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF Sbjct: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ Sbjct: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK Sbjct: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS Sbjct: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 >gi|315122590|ref|YP_004063079.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495992|gb|ADR52591.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 351 Score = 598 bits (1543), Expect = e-169, Method: Compositional matrix adjust. Identities = 285/351 (81%), Positives = 320/351 (91%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 M + LTSAQ LY A LI++EQI+ IKEISNHYSIALTP +ANLI+PHNPNDPIARQF Sbjct: 1 MNSHDQKLTSAQQLYKAKLIEQEQINTIKEISNHYSIALTPFMANLIDPHNPNDPIARQF 60 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IPQKEE+NILPEEREDPIGD+NHSPLKGIVHRYPDR+LLKLLH+CPVYCRFCFRREMVGS Sbjct: 61 IPQKEEMNILPEEREDPIGDSNHSPLKGIVHRYPDRVLLKLLHICPVYCRFCFRREMVGS 120 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 QKGT+LS +D +AAL+YIQ +IWEVIFTGGDPLILS RL+ VLK L IKHV+ILRF Sbjct: 121 QKGTILSPQDIDAALSYIQNHPKIWEVIFTGGDPLILSLNRLKTVLKMLMEIKHVKILRF 180 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 HSRVPIVDPQRI+PE IQCLKE+GKP+YIAIHANHP EFS+E+++AIS+LA+AGIILLSQ Sbjct: 181 HSRVPIVDPQRISPEFIQCLKESGKPIYIAIHANHPREFSQESLSAISKLADAGIILLSQ 240 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKGINDDP+ILA+LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQKIVASLKE Sbjct: 241 SVLLKGINDDPKILADLMRIFVESRIKPYYLHHPDLAPGTSHFRLTIEEGQKIVASLKEN 300 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 ISG+CQPFYILD+PGGYGKVKID+HNIKK+ + SY ITDH+NIVH YPP+S Sbjct: 301 ISGICQPFYILDIPGGYGKVKIDSHNIKKIDDESYLITDHNNIVHHYPPRS 351 >gi|227824114|ref|YP_002828087.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii NGR234] gi|227343116|gb|ACP27334.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii NGR234] Length = 350 Score = 452 bits (1163), Expect = e-125, Method: Compositional matrix adjust. Identities = 210/347 (60%), Positives = 266/347 (76%) Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 H+ L +A DL A LI + I +++ Y+IA++PV+ANLI+ +P DPI+RQF+P Sbjct: 4 HRPLRTAGDLVEAGLIDASAEEAIARVASRYAIAISPVVANLIDRTDPQDPISRQFVPDA 63 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 EL + PEER DPIGD HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 64 AELTLTPEERADPIGDGAHSPVSGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLG 123 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 L+ + +AA+AYI E +IWEVI TGGDPL+LS +RLQ++L+ L I HV+++RFH+RV Sbjct: 124 TLTPSELDAAIAYISEHPEIWEVILTGGDPLVLSPRRLQEILERLDAIAHVKVVRFHTRV 183 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V+P RI+ +LI LK +GK Y+A+HANHP E + EA AA +RL +AGI+++SQSVLL Sbjct: 184 PVVEPHRIDADLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLL 243 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 KG+NDDPE+LA LMR FVE RIKPYYLHHPDLA GTSHFRLTIE+GQ +VASL+ ++SGL Sbjct: 244 KGVNDDPEVLAELMRAFVETRIKPYYLHHPDLAPGTSHFRLTIEKGQALVASLRGRVSGL 303 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 CQP YILD+PGG+GK I I+ G G Y +TD H H YPPKS Sbjct: 304 CQPTYILDIPGGHGKAVISASAIEAEGGGCYTVTDFHGNEHAYPPKS 350 >gi|116254324|ref|YP_770162.1| L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv. viciae 3841] gi|115258972|emb|CAK10081.1| putative L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv. viciae 3841] Length = 350 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 201/344 (58%), Positives = 260/344 (75%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K + S DL A L+ ++E++ Y++ALTP I+ LI+ +P+DPIARQF+P Sbjct: 5 KPIKSVDDLMKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 65 ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + +AA YI +IWEVI TGGDPL+LS +RL ++++ L I HV+I+RFH+RVP Sbjct: 125 LDAAAMQAAFDYIHSDEEIWEVILTGGDPLVLSSRRLGEIMEALAGITHVKIIRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP++I+ LI LK +GK VYIA+HANH E + EA AA +RL +AGI ++SQSVLLK Sbjct: 185 VVDPEKIDAALIAALKASGKTVYIALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IVA+L+ +ISGLC Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVAALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349 QP YILD+PGG+GK I ++ G+G Y +TD+ H YPP Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYTVTDYRGGEHSYPP 348 >gi|86359621|ref|YP_471513.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42] gi|86283723|gb|ABC92786.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42] Length = 349 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 201/344 (58%), Positives = 257/344 (74%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K + S DL A L ++ ++ Y+I LTP I LI+ +PNDPIARQF+P Sbjct: 5 KPIKSVDDLVEAGLATPADRAALEAVTARYAITLTPEITRLIDRADPNDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q Sbjct: 65 ELVVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + EAA YI +IWEVI TGGDPL+LS +RL++++K L I HV+I+RFH+RVP Sbjct: 125 LDAAAMEAAFDYIGSHQEIWEVILTGGDPLVLSPRRLREIMKALANISHVKIVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI+++SQSVLLK Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTMEARAACARLVDAGIVMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GINDDP ILA+LM+ FVE R+KPYYLHHPDLA GT HFRLTIEEGQ+IVA+L+ +ISGLC Sbjct: 245 GINDDPAILADLMKAFVENRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVAALRGQISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349 QP YILD+PGG+GK + ++ G+G Y ++D+ H YPP Sbjct: 305 QPTYILDIPGGHGKAVVSGSTVQATGDGCYSVSDYRGGEHSYPP 348 >gi|15964028|ref|NP_384381.1| hypothetical protein SMc00355 [Sinorhizobium meliloti 1021] gi|307301174|ref|ZP_07580936.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti BL225C] gi|307321075|ref|ZP_07600480.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti AK83] gi|15073204|emb|CAC41712.1| Lysine 2,3-aminomutase [Sinorhizobium meliloti 1021] gi|306893247|gb|EFN24028.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti AK83] gi|306903630|gb|EFN34217.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti BL225C] Length = 350 Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust. Identities = 199/346 (57%), Positives = 264/346 (76%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + + +A++L +A L+ +EQ + I +++ Y++A++P IA L++ +PNDPIARQF+P Sbjct: 5 RAIRTARELADAGLVGREQEEAISRVASRYAVAISPTIARLVDRDDPNDPIARQFVPDMA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL ++PEER DPIGD HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG + Sbjct: 65 ELTLMPEERADPIGDGAHSPVAGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ + +AALAYI + +IWEVI TGGDPL+LS +RL ++ L I HV+++RFH+RVP Sbjct: 125 LTPAELDAALAYIAGRPEIWEVILTGGDPLVLSPRRLGDIMVRLAEIDHVKVVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V+P R++ LI LK +GK Y+A+HANHP E + EA AA +RL +AGI+++SQSVLLK Sbjct: 185 VVEPDRVDAGLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LMR FVE RIKPYYLHHPDLA GT HFRL+IEEGQ +VASL+ ++SGLC Sbjct: 245 GVNDDPDVLAALMRAFVETRIKPYYLHHPDLAPGTGHFRLSIEEGQALVASLRGRVSGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGG+GK + I+ G G Y +TD HDYPPK Sbjct: 305 QPAYILDIPGGHGKAVVSAGAIEAEGGGCYTVTDFRGNRHDYPPKG 350 >gi|209551368|ref|YP_002283285.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537124|gb|ACI57059.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 350 Score = 442 bits (1137), Expect = e-122, Method: Compositional matrix adjust. Identities = 199/344 (57%), Positives = 259/344 (75%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K L SA DL A L+ ++E++ Y+IALTP + LI+ +P+DPIARQF+P Sbjct: 5 KPLKSADDLVMAGLVAPADRRALEEVAARYAIALTPDMTRLIDRADPDDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL ILPEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 65 ELTILPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + +AA YI+ +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+RVP Sbjct: 125 LDAAAMQAAFDYIRGHEEIWEVILTGGDPLVLSPRRLRDIMEALADIAHVKIVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP +++ L+ LK +GK VY+A+HANH E + EA AA +RL +AGI ++SQSVLLK Sbjct: 185 VVDPDKVDAALVDALKASGKTVYVALHANHVRELTAEARAACARLIDAGIAMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTIEEGQ+IV+ L+ +ISGLC Sbjct: 245 GVNDDPDVLAALMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVSQLRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349 QP YILD+PGGYGK + ++ G+G Y ++D+ H YPP Sbjct: 305 QPTYILDIPGGYGKTVVSGSTVQARGDGCYSVSDYRGDEHSYPP 348 >gi|15889814|ref|NP_355495.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58] gi|15157746|gb|AAK88280.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58] Length = 363 Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust. Identities = 200/349 (57%), Positives = 267/349 (76%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R +T+ + + L A LI+ E ++ ++ ++ Y++A+TP + L++ H+P DPIARQF+P Sbjct: 12 RFETIKTPEALLEAGLIEAEALEGLRAVTQRYALAITPAVTGLMDSHDPQDPIARQFVPD 71 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 EL LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 72 LAELVHLPEERDDPIGDDAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGN 131 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 ++S ++ +AA AYI+E IWEVI TGGDPL+LS +RL ++K LR I HV+I+RFH+R Sbjct: 132 GMMSPEELDAAFAYIKENPAIWEVILTGGDPLVLSPRRLSDLMKRLRDIPHVKIVRFHTR 191 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+VDP RI+ LI+ LK +GK Y+A+HANH E + A A +RL +AGI ++SQ+VL Sbjct: 192 VPVVDPDRIDAPLIEALKASGKTTYVALHANHARELGDAARNACARLIDAGIAMVSQTVL 251 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 LKGINDDP +LA+LMR+FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+ +SG Sbjct: 252 LKGINDDPAVLADLMRSFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRGHVSG 311 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 LCQP Y+LD+PGG+GK I + +K +G Y ++D + H YPP +S Sbjct: 312 LCQPTYVLDIPGGHGKAMIGRNAAEKTRDGCYSVSDFNGNDHIYPPATS 360 >gi|241206810|ref|YP_002977906.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860700|gb|ACS58367.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 350 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 199/344 (57%), Positives = 259/344 (75%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K + S DL A L+ ++E++ Y++ALTP I+ LI+ +P+DPIARQF+P Sbjct: 5 KPIKSVDDLVKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 65 ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + AA YI+ +IWEVI TGGDPL+LS +RL ++++ L I HV+I+RFH+RVP Sbjct: 125 LDAAAMRAAFDYIRGHEEIWEVILTGGDPLVLSPRRLGEIMEALAGIAHVKIIRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP++I+ LI LK +GK VY+A+HANH E + EA AA +RL +AGI ++SQSVLLK Sbjct: 185 VVDPEKIDAALIGALKASGKTVYVALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IV +L+ +ISGLC Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVEALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349 QP YILD+PGG+GK I ++ G+G Y +TD+ H YPP Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYSVTDYRGGEHSYPP 348 >gi|190893895|ref|YP_001980437.1| L-lysine 2,3-aminomutase [Rhizobium etli CIAT 652] gi|190699174|gb|ACE93259.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CIAT 652] Length = 350 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 197/346 (56%), Positives = 259/346 (74%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K + + DL A L + ++E++ Y+IALTPV+A LI+ +P+DPIARQF+P Sbjct: 5 KPIKTVDDLLQARLATPDDRAMLEEVAARYAIALTPVMARLIDRADPDDPIARQFVPDPA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + ER DPIGD HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q Sbjct: 65 ELTVATGERADPIGDYAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + +AA YI + +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+R+P Sbjct: 125 LDAAAMQAAFDYIADHQEIWEVILTGGDPLVLSPRRLRDIMEALAAIAHVKIVRFHTRIP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTGEARAACARLVDAGIAMISQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LMR FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC Sbjct: 245 GVNDDPDVLAELMRAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGG+GK I I+ G+G Y ++D+ H YPP Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYTVSDYRGGEHSYPPAG 350 >gi|218674354|ref|ZP_03524023.1| L-lysine 2,3-aminomutase protein [Rhizobium etli GR56] Length = 350 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 197/346 (56%), Positives = 256/346 (73%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K L S DL A L + E++ Y+IALTP + LI+ +P+DPIARQF+P Sbjct: 5 KPLKSVDDLLQAGLATLGDRAMLDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q Sbjct: 65 ELTVAPEERADPIGDHTHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + + A YI +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+R+P Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRIP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK Sbjct: 185 VVDPEKIDAALIDALKASGKTVYVALHANHPSELTSEARAACARLVDAGIAMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGG+GK I I+ G+G Y ++D+ H YPP Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYSVSDYRGGEHFYPPAG 350 >gi|222087704|ref|YP_002546241.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84] gi|221725152|gb|ACM28308.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84] Length = 350 Score = 440 bits (1131), Expect = e-121, Method: Compositional matrix adjust. Identities = 200/346 (57%), Positives = 263/346 (76%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + + + DL A LI + ++ ++ Y+IALTP +A LI+ +P DPIARQF+P Sbjct: 5 RPIRTVDDLEQAGLIDSAEALSLEVVAERYAIALTPTVARLIDKADPADPIARQFVPDMA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + PEER DPI D+ +SP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 65 ELVVTPEERADPISDHAYSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L +AA AYI++ +IWEVI TGGDPL+LS +RL+++L+ L I+HV+I+RFH+RVP Sbjct: 125 LDGAALDAAFAYIRDHEEIWEVILTGGDPLVLSPRRLEEMLRQLADIEHVKIVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP +I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI+L+SQSVLLK Sbjct: 185 VVDPLKIDGALIAALKASGKTVYVALHANHPRELTAEARAACARLVDAGIVLVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA+LM+ FVE RIKPYYLHHPDLA GTSHFRLTI EGQ IVA+L+ +ISGLC Sbjct: 245 GVNDDPDVLASLMKAFVETRIKPYYLHHPDLAPGTSHFRLTIAEGQAIVAALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGG+GK I ++++G G Y ++D+ H YPP+ Sbjct: 305 QPTYILDIPGGHGKADIGKSAVRELGEGCYSVSDYRGGEHLYPPEG 350 >gi|218461424|ref|ZP_03501515.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Kim 5] Length = 350 Score = 435 bits (1119), Expect = e-120, Method: Compositional matrix adjust. Identities = 195/343 (56%), Positives = 256/343 (74%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K L + DL A L+ + E++ Y+IALTP + LI+ +P+DPIARQF+P Sbjct: 5 KPLKNVDDLLQAGLVLPGHRAILDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q Sbjct: 65 ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + + A YI +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+RVP Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK Sbjct: 185 VVDPEKIDLALIAALKASGKTVYVALHANHPRELTSEARAACARLVDAGIAMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 QP YILD+PGG+GK I ++ G+G Y ++D+ H YP Sbjct: 305 QPAYILDIPGGHGKAVISESVVRATGDGCYSVSDYRGGEHSYP 347 >gi|218682609|ref|ZP_03530210.1| lysine 2,3-aminomutase YodO family protein [Rhizobium etli CIAT 894] Length = 350 Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust. Identities = 194/346 (56%), Positives = 257/346 (74%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K + S DL A L ++E++ Y+IALTP + LI+ +P+DPIARQF+P Sbjct: 5 KPIKSVDDLVTAGLAAPADRAALEEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q Sbjct: 65 ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + +AA YI+ +IWEVI TGGDPL+LS +RL+++++ L I HV+I+RFH+RVP Sbjct: 125 LDAAAMQAAFDYIRGHQEIWEVILTGGDPLVLSPRRLREIMEALAEIAHVKIVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP +I+ I LK +GK VY+A+HANH E + EA AA +RL +AGI+++SQSVLLK Sbjct: 185 VVDPGKIDDASIAALKASGKTVYVALHANHVGELTAEARAACARLVDAGIVMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LM+ VE+R+KPYYLHHPDLA GT+HFRLT+EEGQ IVA+L+ +ISGLC Sbjct: 245 GVNDDPDVLAELMKAGVEIRVKPYYLHHPDLAPGTAHFRLTLEEGQSIVAALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGGYGK + ++ G G Y ++D+ H YPP + Sbjct: 305 QPTYILDIPGGYGKAVVSASAVRARGEGCYSVSDYRGDEHCYPPAN 350 >gi|150398662|ref|YP_001329129.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae WSM419] gi|150030177|gb|ABR62294.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae WSM419] Length = 350 Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust. Identities = 195/346 (56%), Positives = 264/346 (76%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +T+ + +DL A LI +E+ + I ++ Y++A++P I+ L++ +P+DPIARQF+P Sbjct: 5 RTIRTPRDLVEAGLIGREREEAISRVTASYAVAISPAISRLVDRDDPDDPIARQFVPDMA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL ++PEER DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG + Sbjct: 65 ELAVMPEERADPIGDSTHSPVTGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ + + A+AYI +IWEVI TGGDPL+LS +RL ++++ L I+HV+++RFH+RVP Sbjct: 125 LTPAELDRAIAYISGHQEIWEVILTGGDPLVLSPRRLGEIMERLAKIEHVKVVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V+P R++ LI LK +GK Y+A+HANHP E + A AA +RL +AGI+++SQSVLLK Sbjct: 185 VVEPDRVDAPLIAALKGSGKATYVALHANHPRELTVAARAAAARLIDAGIVMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP+ILA LMR FVE R+KPYYLHHPDLA GTSHFRL+IEEGQ +VASL+ ++SGLC Sbjct: 245 GVNDDPDILAELMRAFVETRVKPYYLHHPDLAPGTSHFRLSIEEGQALVASLRGRVSGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGG+GK + +I+ G G Y +TD H YPPK Sbjct: 305 QPAYILDIPGGHGKSVVSASSIEAEGGGCYTVTDFRGNRHAYPPKG 350 >gi|325293926|ref|YP_004279790.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3] gi|325061779|gb|ADY65470.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3] Length = 354 Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust. Identities = 196/349 (56%), Positives = 264/349 (75%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R +T+ + + L A LIK E +++++ ++ Y++A+T +A+L++ +P DPIARQF+P Sbjct: 3 RLETIKTPEALVEAGLIKTEALEDVRAVTQRYALAITSTMADLMDSRDPQDPIARQFVPD 62 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 EL LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 63 LVELVHLPEERDDPIGDSAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGN 122 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 ++S ++ +AA YI+ IWEVI TGGDPL+LS +RL ++ L+ + HV+I+RFH+R Sbjct: 123 GMMSPEELDAAFDYIKANPAIWEVILTGGDPLVLSARRLSDLMTRLKDVPHVKIVRFHTR 182 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+VDP+RI+ LI+ LK +GK Y+A+HANH E + A +A +RL +AGI ++SQ+VL Sbjct: 183 VPVVDPERIDGPLIESLKASGKTTYVALHANHARELGQAARSACARLIDAGIAMVSQTVL 242 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 LKGINDD ILA LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+ +SG Sbjct: 243 LKGINDDSAILAELMRAFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRGHVSG 302 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 LCQP Y+LD+PGG+GK I + +K +G Y I+D + H YPP +S Sbjct: 303 LCQPTYVLDIPGGHGKATIGPNAAEKTRDGCYSISDFNGNDHIYPPPAS 351 >gi|222106966|ref|YP_002547757.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4] gi|221738145|gb|ACM39041.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4] Length = 349 Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust. Identities = 193/342 (56%), Positives = 252/342 (73%), Gaps = 1/342 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 KT+ + ++L L+ E E+ ++ Y+IA+TP + LI+P++P DPIA QF+PQ Sbjct: 6 KTVKTVRELVETGLVAAETGPELDAVAARYAIAITPAMLALIDPNDPTDPIAAQFVPQAG 65 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P ER DPIGD+ HSP++GIVHRYPDR+LLK++H CPVYCRFCFRREMVG + Sbjct: 66 ELVHQPVERADPIGDHAHSPVEGIVHRYPDRVLLKVVHSCPVYCRFCFRREMVGPDGDGL 125 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS +AA+ YI++ IWEVIFTGGDPL+LS +RL+ +L+ L I HV+I+RFHSRVP Sbjct: 126 LSGPALDAAITYIRDHKDIWEVIFTGGDPLVLSPRRLRSILQQLGTIDHVRIIRFHSRVP 185 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP RI+ +LI L+ +GK YIAIHANHP E + +A AA ++L AG LLSQ+VLLK Sbjct: 186 VADPARIDKDLIDALQASGKTTYIAIHANHPRELTPQARAASAKLLQAGFALLSQTVLLK 245 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDD +LA+LMR+FV++RI+PYYLHHPDLA GT HFRL+I EGQ IV++L +SGLC Sbjct: 246 GVNDDAGVLADLMRSFVDMRIRPYYLHHPDLAPGTGHFRLSIAEGQAIVSALHGHLSGLC 305 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 QP Y+LD+PGG+GK ID I K G+ Y +TD H H Y Sbjct: 306 QPTYVLDIPGGHGKAPIDASQISKEGD-HYLVTDFHGHHHIY 346 >gi|182680126|ref|YP_001834272.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182636009|gb|ACB96783.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 356 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 188/344 (54%), Positives = 243/344 (70%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L S DL A LI EQ + E+ ++I LT ++A+LIN ++P DPIARQF+P E Sbjct: 12 ALRSTTDLVAAGLIPPEQERALAELEKTHAIGLTTIMADLINRNDPLDPIARQFLPDPRE 71 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + PEE +DPIGD SP++GIVHRYPDR+LLKLLH+CPVYCRFCFRRE VG L Sbjct: 72 ADRRPEELDDPIGDAAFSPVEGIVHRYPDRVLLKLLHICPVYCRFCFRRETVGPGSPMHL 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + +AA AYI IWEVI TGGDPLILS +RL ++L+ L I HV+ILR H+RVP Sbjct: 132 SPEALDAAFAYIASTPSIWEVILTGGDPLILSPRRLAELLERLDAIDHVKILRLHTRVPC 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 VDP+RI P+L+ L+ + K VY+A+HANHP E + +A A + +AGI +LSQSVLL+G Sbjct: 192 VDPERITPDLVALLRGSRKTVYLALHANHPRELTPQARQACAAFIDAGIPMLSQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD +LA+LMR FVE RIKPYYLHHPDLA GT HFRL+I EGQ ++ L+ +SGLCQ Sbjct: 252 VNDDASVLADLMRAFVETRIKPYYLHHPDLAPGTGHFRLSIAEGQALMRRLRGHLSGLCQ 311 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 P Y+LDLPGG+GK + + + + + D+ ++H YPPK Sbjct: 312 PTYMLDLPGGFGKSPVGPNYLGAENDQGLRVEDYRGMMHAYPPK 355 >gi|170738726|ref|YP_001767381.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp. 4-46] gi|168193000|gb|ACA14947.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp. 4-46] Length = 356 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 178/349 (51%), Positives = 244/349 (69%), Gaps = 3/349 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 + +TL L A L+ + + ++ +++ Y++A+TP +A+LI P D I RQF+P Sbjct: 1 MSRRTLRDPASLVEAGLVPRAALPALERVASRYAVAVTPAMADLIE--TPEDGIGRQFLP 58 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 + EEL+ P ER DPIGD H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG Sbjct: 59 RAEELDAAPGERADPIGDAAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPDG 118 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 LS +AALAY+ + +IWEV+ TGGDP +LS +RL+++ L HV++LR H+ Sbjct: 119 MGALSEAQLDAALAYVAARPEIWEVVVTGGDPFLLSPRRLERIGAALAATDHVRVLRLHT 178 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 RVP V+P+R++ L+ LK G+ V++A+HANHP EF+ A AAI+RL +AGI L+SQSV Sbjct: 179 RVPAVEPERVDAALVAALKRFGRAVFVALHANHPGEFTPAARAAIARLVDAGIPLVSQSV 238 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LL+G+NDDPE LA LMR FVE R+KPYYLHH DLA GT HFR ++ GQ ++ L+ ++S Sbjct: 239 LLRGVNDDPETLAALMRAFVENRVKPYYLHHGDLAPGTGHFRTSLPVGQALMRGLRGRVS 298 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 GLCQP Y+LD+PGG+GKV + ++ G + +TD H YPP+ Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPAYLEPR-PGGFTVTDPEGRAHAYPPEG 346 >gi|86750071|ref|YP_486567.1| hypothetical protein RPB_2954 [Rhodopseudomonas palustris HaA2] gi|86573099|gb|ABD07656.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris HaA2] Length = 363 Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust. Identities = 187/349 (53%), Positives = 250/349 (71%), Gaps = 4/349 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L L E D++++++ Y+IA+TP +A LI+P++P+DPIARQ+IP+ +E Sbjct: 14 TLRQPSELIAQGLAPAESRDDLEQVAARYAIAVTPDVAALIDPNDPHDPIARQYIPRADE 73 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L LP ER+DPIGD H+P++GIVHR+ DR+LLKL+HVC VYCRFCFRRE +G K L Sbjct: 74 LVTLPIERDDPIGDGAHAPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRRETIGPGKDNAL 133 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + T AAL YI+ +IWEVIFTGGDPL+LS +R+ +++ L I HV+I+RFH+RVP+ Sbjct: 134 SREATAAALDYIRAHPEIWEVIFTGGDPLMLSPRRMAEIMAELATIAHVKIIRFHTRVPV 193 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP RI PEL++ L+ GK ++A+HANHP E + A AA + L +AGI ++SQSVLL+G Sbjct: 194 ADPARITPELVRALQTPGKTTWVALHANHPRELTAAARAACAMLIDAGIPMVSQSVLLRG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD E L LMR FVE RIKPYYLHH DLA GT+H R TI EGQ ++ +L+ ++SGLCQ Sbjct: 254 VNDDSETLEALMRGFVECRIKPYYLHHGDLAPGTAHLRTTIAEGQALMRALRGRVSGLCQ 313 Query: 307 PFYILDLPGGYGKVKID----THNIKKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGGYGK I T V + Y + D+ VH YPP S Sbjct: 314 PEYVLDIPGGYGKAPIGPNYLTGEDGTVADSRYRVRDYCGDVHLYPPGS 362 >gi|220921877|ref|YP_002497178.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium nodulans ORS 2060] gi|219946483|gb|ACL56875.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium nodulans ORS 2060] Length = 356 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 178/348 (51%), Positives = 244/348 (70%), Gaps = 3/348 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 + +TL L A L+ ++ E++ ++ Y++A+TP +A LI P D I RQF+P Sbjct: 1 MSRRTLRDPAALAAAGLVPAARLPELERVAARYAVAVTPDMAELIE--APEDGIGRQFLP 58 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 EEL+ P ER DPIGDN H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG + Sbjct: 59 SAEELDTAPGERADPIGDNAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPKG 118 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 L + +AALAYI + +IWEV+ TGGDP +L+ +RL+++ L ++HV++LR H+ Sbjct: 119 VGSLGEAELDAALAYIAARPEIWEVVVTGGDPFLLAPRRLERIAAALGGMEHVRVLRLHT 178 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 RVP+VDP R++ L+ LK G+ V++A+HANHP EF+ + AA++RL +AGI L+SQSV Sbjct: 179 RVPVVDPARVDAALVAALKAFGRAVFVALHANHPREFTPASRAALARLVDAGIPLVSQSV 238 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LL+G+NDD E L LMR FVE R+KPYYLHH DLA GT HFR + EGQ ++ L+ ++S Sbjct: 239 LLRGVNDDAETLGLLMRAFVENRVKPYYLHHGDLAPGTGHFRTGLAEGQALMRILRGRVS 298 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 GLCQP Y+LD+PGG+GKV + + G G + +TD H YPP+ Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPGYLAPRGAG-WTVTDPDGREHAYPPE 345 >gi|217976642|ref|YP_002360789.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris BL2] gi|217502018|gb|ACK49427.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris BL2] Length = 363 Score = 391 bits (1004), Expect = e-107, Method: Compositional matrix adjust. Identities = 192/350 (54%), Positives = 250/350 (71%), Gaps = 1/350 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 LR KTL SA DL A L + EI+ + Y IA+TP IA LI+ PNDPIARQF+ Sbjct: 12 SLRAKTLRSADDLVEAGLASARRRAEIESVGETYPIAVTPAIAALIDRDAPNDPIARQFV 71 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EL+ PE+ DPIGD +SP++G+VHRYPDR+LLKLL VCPVYCRFCFRR+MVG Sbjct: 72 PDIAELSPRPEDLADPIGDEAYSPVEGVVHRYPDRVLLKLLLVCPVYCRFCFRRDMVGPG 131 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 K LS + +AALAYI +IWEVI TGGDP LS +RL ++++ L I+HV+I+R H Sbjct: 132 KSAHLSPEALDAALAYIAADPRIWEVILTGGDPFALSPRRLAEIMERLAAIEHVRIVRVH 191 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +RVP VDP I+ LI LK++GK +Y+A+HANHP E + EA AA +RL +AGI ++SQS Sbjct: 192 TRVPCVDPDAIDAALIAALKKSGKTIYVALHANHPRELTSEARAACARLIDAGIPMVSQS 251 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL G+NDD E L+ LMR FVE R+KPYYLHH DLA G +HFR+ IE+G++++ L+ ++ Sbjct: 252 VLLAGVNDDVETLSALMRGFVEARVKPYYLHHLDLAPGVAHFRVDIEKGRELMQQLRGRL 311 Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVG-NGSYCITDHHNIVHDYPPK 350 SGLCQP Y+LD+PGG+GK I I+ G NG + + D+ H YPP+ Sbjct: 312 SGLCQPAYMLDVPGGHGKSPIGPDFIEPAGANGVFRVRDYQGATHLYPPQ 361 >gi|39935581|ref|NP_947857.1| hypothetical protein RPA2515 [Rhodopseudomonas palustris CGA009] gi|39649434|emb|CAE27956.1| putative L-lysine 2,3-aminomutase [Rhodopseudomonas palustris CGA009] Length = 363 Score = 388 bits (996), Expect = e-106, Method: Compositional matrix adjust. Identities = 181/349 (51%), Positives = 245/349 (70%), Gaps = 4/349 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP EE Sbjct: 14 TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPSAEE 73 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+ Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLAEIMAELAAIEHVKIVRFHTRLPV 193 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP RI P+L++ L+ GK ++A+HANHP E + +A AA +R+ +AGI ++SQSVLL+G Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTGDARAACARIVDAGIPMVSQSVLLRG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313 Query: 307 PFYILDLPGGYGKVKIDTHNIKKV-GNG---SYCITDHHNIVHDYPPKS 351 P Y+LD+PGGYGK + + + G G Y + D+ VH YPP S Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGRDSRYRVADYCGEVHLYPPLS 362 >gi|299133809|ref|ZP_07027003.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2] gi|298591645|gb|EFI51846.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2] Length = 357 Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust. Identities = 179/347 (51%), Positives = 243/347 (70%), Gaps = 4/347 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L + L+ +E + ++ ++ Y+IA+TP +A LI+P++PNDPIARQ++P +E Sbjct: 10 TLRRPAELADQKLVSREALPALEAVAARYAIAITPAVAALIDPNDPNDPIARQYVPSTQE 69 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L I P ER DPIGDN SP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K + L Sbjct: 70 LQIEPVERVDPIGDNARSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKDSAL 129 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S A+ YI+ +IWEVI TGGDPL+LS +RL++++ L I HV+I+RFH+RVP+ Sbjct: 130 SDHAYAKAIDYIRTHPEIWEVILTGGDPLMLSTRRLKEIVNDLAAIPHVKIIRFHTRVPV 189 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP R+ E+ + L ++A+HANHP E + EA AA +RL + GI ++SQSVLL+G Sbjct: 190 ADPARMTDEVAEALHHPDVTTWVALHANHPRELTAEARAACARLIDRGIPMVSQSVLLRG 249 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND E L LMR FVE RIKPYYLHH DLA GTSH R T+EEG+ ++ L+ +SGLCQ Sbjct: 250 VNDTAETLTALMRAFVECRIKPYYLHHGDLAPGTSHLRTTLEEGEALMRQLRGHVSGLCQ 309 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYC----ITDHHNIVHDYPP 349 P Y+LD+PGGYGK+ + + + +G + D+ VH YPP Sbjct: 310 PDYVLDIPGGYGKIPVGPAYLSQQRDGERMQPRRLVDYCGGVHSYPP 356 >gi|192291173|ref|YP_001991778.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas palustris TIE-1] gi|192284922|gb|ACF01303.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas palustris TIE-1] Length = 363 Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust. Identities = 182/349 (52%), Positives = 248/349 (71%), Gaps = 4/349 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP+ EE Sbjct: 14 TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPRAEE 73 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+ Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP RI P+L++ L+ GK ++A+HANHP E +E A AA +R+ +AGI ++SQSVLL+G Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTEAARAACARIIDAGIPMVSQSVLLRG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313 Query: 307 PFYILDLPGGYGKVKIDTHNIKKV-GNGS---YCITDHHNIVHDYPPKS 351 P Y+LD+PGGYGK + + + G G+ Y + D+ VH YPP+S Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGADSRYRVADYCGEVHLYPPQS 362 >gi|163852420|ref|YP_001640463.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium extorquens PA1] gi|163664025|gb|ABY31392.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium extorquens PA1] Length = 353 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 175/345 (50%), Positives = 234/345 (67%), Gaps = 1/345 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L SA L A L+ + ++ ++ Y++++T +A LI+ +P+DPIARQFIP+ EE Sbjct: 4 ALKSATALARAGLVDAAALPTLERVAARYAVSVTADMAELIDASDPDDPIARQFIPRAEE 63 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + PEER DPIGD+ H + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG L Sbjct: 64 IETRPEERADPIGDDAHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + A YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+ Sbjct: 124 SEAELAVAYRYIAAHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V+P R++ L+ LK V++A+HANHP EF+ A AI+RL +AGI ++SQSVLL+G Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARGAIARLVDAGIPMVSQSVLLRG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGG+GKV + + G S+ +TD VH YPP+S Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAAGE-SWRVTDPSGAVHAYPPES 347 >gi|300022957|ref|YP_003755568.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299524778|gb|ADJ23247.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 356 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 172/325 (52%), Positives = 230/325 (70%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 M + LTS DL A L D + + Y+I++TP +A+LI+P++P DPIARQF Sbjct: 1 MTRTPRKLTSVDDLIAAELAPASARDALNNVGARYAISVTPAVADLIDPNDPADPIARQF 60 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL ER DPIGD SP G+VHRYPDR+LLK+ VCPVYCRFCFRREMVG Sbjct: 61 VPDARELETHAAERADPIGDRIKSPAPGVVHRYPDRVLLKIASVCPVYCRFCFRREMVGP 120 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 G LS+ D AA+AYI+ +WEVI TGGDPL+LS +R+++V + L I HV+ILR+ Sbjct: 121 ANGETLSADDLAAAVAYIRATPAVWEVILTGGDPLVLSPRRIREVTEMLSAIPHVKILRW 180 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 H+RVP+VDP R+ ELI LK K V++ +H NH E + A A+++L +AGI L+SQ Sbjct: 181 HTRVPVVDPDRVTDELIAALKATHKTVFVGLHTNHARELTGSARTAVAKLVDAGIPLVSQ 240 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+NDD + L +LMRT VELR+KPYYLHH DLA GT+HFR TI +GQ ++ L+++ Sbjct: 241 TVLLKGVNDDADTLEDLMRTLVELRVKPYYLHHGDLAPGTAHFRTTIAKGQAVMRELRKR 300 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325 +SGL P Y+LDLPG +GKV ++++ Sbjct: 301 LSGLALPTYVLDLPGAHGKVPLESY 325 >gi|240139757|ref|YP_002964234.1| putative aminomutase, putative kamA and yjeK-like protein [Methylobacterium extorquens AM1] gi|240009731|gb|ACS40957.1| putative aminomutase, putative kamA and yjeK-like protein [Methylobacterium extorquens AM1] Length = 353 Score = 379 bits (974), Expect = e-103, Method: Compositional matrix adjust. Identities = 176/345 (51%), Positives = 236/345 (68%), Gaps = 1/345 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L SA L A L+ + ++ ++ Y++++T +A LI+ ++P+DPIARQFIP+ EE Sbjct: 4 ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + PEER DPIGD+ H + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG L Sbjct: 64 IETRPEERADPIGDDTHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + AA YI +IWEV+ TGGDP LS +RL + L I HV++LRFH+RVP+ Sbjct: 124 SEVELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITDALGAIPHVRVLRFHTRVPV 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V+P R++ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGG+GKV + + + S+ +TD VH YPP+S Sbjct: 304 PLYVLDIPGGHGKVPVGPGYL-DAADESWRVTDPSGAVHAYPPES 347 >gi|170749147|ref|YP_001755407.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium radiotolerans JCM 2831] gi|170655669|gb|ACB24724.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium radiotolerans JCM 2831] Length = 347 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 177/347 (51%), Positives = 241/347 (69%), Gaps = 1/347 (0%) Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 ++ L SA DL +A LI + D + + Y++++TP +A LI+P +P+DPI RQF+P+ Sbjct: 2 NRALRSADDLLSAGLISGAEADALGAVLARYAVSVTPDMAELIDPQDPDDPIGRQFVPRV 61 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E PEER DPIGD H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRREMVG Sbjct: 62 AEAVATPEERADPIGDAAHAPVTGIVHRYPDRVLLKPLHVCPVYCRFCFRREMVGPDGLG 121 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 L+ + +AALAYI + +IWEV+ TGGDP LS +RL + + L I HV+++R H+RV Sbjct: 122 TLTDAELDAALAYIAQDPRIWEVVLTGGDPFALSPRRLGVIAERLAAIAHVRVMRVHTRV 181 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V P ++ L++ LK G+ V++A+HANHP EF+ A AA +RL +AGI L+ QSVLL Sbjct: 182 PVVKPDLVSDALVRALKRFGRAVFVAVHANHPREFTAAASAACARLVDAGIPLVGQSVLL 241 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +G+ND+ L LMRT VE RIKPYYLHH DLA GT+H R + EGQ ++ +L+ ++SGL Sbjct: 242 RGVNDEAATLEALMRTLVENRIKPYYLHHGDLAPGTAHLRTDVAEGQALMRALRGRLSGL 301 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP Y+LD+PGG+GKV I ++ +G +TD H YPPK+ Sbjct: 302 AQPTYVLDIPGGHGKVPIGPGYLRDTPDGVR-VTDPGGQDHAYPPKA 347 >gi|218531178|ref|YP_002421994.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium chloromethanicum CM4] gi|218523481|gb|ACK84066.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium chloromethanicum CM4] Length = 353 Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust. Identities = 174/345 (50%), Positives = 236/345 (68%), Gaps = 1/345 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L SA L A L+ + ++ ++ Y++++T +A LI+ ++P+DPIARQFIP+ EE Sbjct: 4 ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + PEER DPIGD+ H + GIVHRY DR+LLK LH+CPVYCRFCFRRE VG L Sbjct: 64 IETRPEERADPIGDDAHEAVPGIVHRYADRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + AA YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+ Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V+P R++ L+ LK V++A+HANHP EF+ A AAI++L +AGI ++SQSVLL+G Sbjct: 184 VEPARVDAALVDALKGFSGAVFVALHANHPREFTPAARAAIAQLVDAGIPMVSQSVLLRG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD E L LMR FVE RIKPYYLHH DLA GT H R + +GQ ++ +L+ ++SGL Q Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPQGQALMRTLRGRLSGLAQ 303 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGG+GKV + + G S+ +TD VH YPP+S Sbjct: 304 PLYVLDIPGGHGKVPVGPSYLDAAGE-SWRVTDPSGAVHAYPPES 347 >gi|188582434|ref|YP_001925879.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi BJ001] gi|179345932|gb|ACB81344.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi BJ001] Length = 353 Score = 377 bits (967), Expect = e-102, Method: Compositional matrix adjust. Identities = 173/345 (50%), Positives = 241/345 (69%), Gaps = 1/345 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L S L A L+ E + ++ ++ Y++++T +A LI+ +P+DPIARQF+P+ EE Sbjct: 4 ALKSTTALARAGLLPAEALPALERVAARYAVSVTADMAELIDRDDPHDPIARQFVPRAEE 63 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + EER DPIGD+ H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG L Sbjct: 64 IETRVEERADPIGDDAHAPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPAGHGSL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + AA YI + +IWEV+ TGGDP LS +RL ++ TL I HV++LRFH+RVP+ Sbjct: 124 SEAELAAAFRYIADHPEIWEVVVTGGDPFALSPRRLGEIATTLGAIPHVRVLRFHTRVPV 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V+P R++ +++ LK+ V++A+HANHP EF+ A AAI+RL +AG+ ++SQSVLL+G Sbjct: 184 VEPARVDADVVAALKKFPGAVFVALHANHPREFTPAARAAIARLVDAGLPMVSQSVLLRG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ L+ ++SGL Q Sbjct: 244 VNDDAATLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRHLRGRLSGLAQ 303 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGG+GKV + +++ +G++ +TD VH YPP + Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLEE-SDGAWQVTDPSGAVHPYPPGT 347 >gi|254562169|ref|YP_003069264.1| aminomutase [Methylobacterium extorquens DM4] gi|254269447|emb|CAX25413.1| putative aminomutase, putative homologue kamA and yjeK [Methylobacterium extorquens DM4] Length = 353 Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust. Identities = 174/345 (50%), Positives = 235/345 (68%), Gaps = 1/345 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L SA L A L+ + + ++ ++ Y++++T +A LI+ +P DPIARQFIP+ EE Sbjct: 4 ALKSATALARAGLVDAQALPALERVAARYAVSVTADMAELIDASDPADPIARQFIPRAEE 63 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + PEER DPIGD+ H + G+VHRYPDR+LLK LH+CPVYCRFCFRRE VG L Sbjct: 64 IETRPEERADPIGDDAHEAVSGVVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + AA YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+ Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V+P R++ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q Sbjct: 244 VNDVAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGG+GKV + + + S+ +TD VH YPP+S Sbjct: 304 PLYVLDIPGGHGKVPVGPGYL-DAADESWRVTDPSGAVHAYPPES 347 >gi|209885154|ref|YP_002289011.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans OM5] gi|209873350|gb|ACI93146.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans OM5] Length = 357 Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust. Identities = 177/347 (51%), Positives = 240/347 (69%), Gaps = 3/347 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L NL+ ++ + ++ ++ Y+IA+TP +A LI+P++PNDPIARQ++P +E Sbjct: 11 TLRQPAELAAHNLVSQDALQGLEAVAKRYAIAITPAVAELIDPNDPNDPIARQYVPSPQE 70 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L ER DPIGD HSP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L Sbjct: 71 LQSETIERVDPIGDRAHSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKETAL 130 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S A+ YI+ +IWEVI TGGDPL+LS +RL+++ L I HV+I+RFH+RVPI Sbjct: 131 SDAAYTKAIDYIRTHPEIWEVILTGGDPLMLSARRLKEITADLAAIPHVRIVRFHTRVPI 190 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP+R+ E+ L+ ++A+HANHP E + A AA +RL + GI L+SQSVLL+G Sbjct: 191 ADPERVTDEVADALRHPDVTTWVAVHANHPRELTPTARAACARLIDRGIPLVSQSVLLRG 250 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND E L LMR FVE RIKPYYLHH DLA GT+H R ++EEG+ ++ L+ +SGLCQ Sbjct: 251 VNDTVETLTALMRAFVECRIKPYYLHHGDLAPGTAHLRTSLEEGEALMRKLRGYVSGLCQ 310 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYC---ITDHHNIVHDYPPK 350 P Y+LD+PGG+GK+ + + G G + D+ VH YPP+ Sbjct: 311 PDYVLDIPGGFGKIPVGPVYLSPEGAGPTQRRRLLDYCGEVHVYPPE 357 >gi|316934333|ref|YP_004109315.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas palustris DX-1] gi|315602047|gb|ADU44582.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas palustris DX-1] Length = 363 Score = 374 bits (961), Expect = e-102, Method: Compositional matrix adjust. Identities = 180/350 (51%), Positives = 246/350 (70%), Gaps = 4/350 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL ++L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP+ EE Sbjct: 14 TLRHPEELIAEGFAAADGRATLTEVAARYAIAVTPAVAALIDRDDPDDPIARQYIPRAEE 73 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+ Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP RI P+L+Q L+ K ++A+HANHP EF+ A A +R+ +AGI ++SQSVLL+G Sbjct: 194 ADPTRITPDLVQALRTPSKTTWLALHANHPREFTAAARVACARIIDAGIPMVSQSVLLRG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDDP+ L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ Sbjct: 254 VNDDPDTLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKSS 352 P Y+LD+PGGYGK + + + N Y + D+ VH YPP+S Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLLDADGTDPNSRYRVADYCGEVHLYPPRSG 363 >gi|209965785|ref|YP_002298700.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW] gi|209959251|gb|ACI99887.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW] Length = 353 Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust. Identities = 175/343 (51%), Positives = 236/343 (68%), Gaps = 2/343 (0%) Query: 6 KTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 +TL S L +A L+ + ++ ++ ++ +++A+TP +A L++P +P DP+ARQF+P Sbjct: 10 RTLRSPGALADAGLLPDDGRLPALEAVARRFAVAVTPAVAELVDPTDPADPVARQFLPDP 69 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 EL PEE DPIGD SP+KGIVHRY DR+LLK +H CPVYCRFCFRREMVG T Sbjct: 70 AELETRPEELADPIGDAPFSPVKGIVHRYRDRVLLKPVHTCPVYCRFCFRREMVGPGAET 129 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 L D +AAL YI + +IWEVI TGGDPLILS +RL +++ L I HV I+R HSRV Sbjct: 130 -LDGADLDAALDYIAARPEIWEVILTGGDPLILSPRRLAEIVARLDAIPHVGIVRLHSRV 188 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+VDP+R+ EL+ L+ ++ +HANH E +EEA AAI+RL +AGI +LSQSVLL Sbjct: 189 PVVDPERVTAELVAALRGRRLTTWVMLHANHWKELTEEARAAIARLVDAGIPMLSQSVLL 248 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 KG+NDD E LA R V R+KP+YLH DLA GT+HFR T+ EGQ ++ +L+ +SGL Sbjct: 249 KGVNDDVETLARTFRALVAARVKPHYLHQGDLAKGTAHFRTTVAEGQALMRALRGDVSGL 308 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 CQP Y+LD+PGG+GKV + + + G G + +TD H Y Sbjct: 309 CQPTYVLDIPGGHGKVPLTPTHAEPDGAGGWTVTDPRGGRHPY 351 >gi|167644729|ref|YP_001682392.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31] gi|167347159|gb|ABZ69894.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31] Length = 347 Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust. Identities = 180/347 (51%), Positives = 244/347 (70%), Gaps = 4/347 (1%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L + L SAQ L A L+ E++ I+ ++ Y++A+TP +A LI+P N +DPIARQFIP Sbjct: 2 LPARPLRSAQALAEAGLVAAERLPAIEAVAARYAVAITPDMAALIDPANESDPIARQFIP 61 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 + EL+ P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + Sbjct: 62 SEAELSENPGEIPDPIGDEAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEG 121 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 L+ + +AA AYI S+IWEVI TGGDPL+LS +RL+ + + L I+HV+++RFH+ Sbjct: 122 LANLTPEKLDAAFAYIAAHSEIWEVIITGGDPLVLSPRRLRDIGERLAGIEHVKVVRFHT 181 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+VDP I E++ LK +GK VY+A+HANH E +E A AA +R+ +AG+ +LSQ+V Sbjct: 182 RIPVVDPGAITGEMVDALKASGKTVYVALHANHARELTEAARAACARIIDAGVPMLSQTV 241 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKGINDDPE L LMR FVE RI+PYYLHH D A GT H R ++E+G+ ++ +++ + S Sbjct: 242 LLKGINDDPETLGTLMRAFVESRIRPYYLHHGDHAPGTGHLRTSVEDGRALMRAIRGRFS 301 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349 GLCQP Y+LD+P G+GKV I + G + D + H YPP Sbjct: 302 GLCQPTYVLDIPDGHGKVPIGPDYLAVEGE----VEDPNGGAHAYPP 344 >gi|296448496|ref|ZP_06890376.1| lysine 2,3-aminomutase YodO family protein [Methylosinus trichosporium OB3b] gi|296253995|gb|EFH01142.1| lysine 2,3-aminomutase YodO family protein [Methylosinus trichosporium OB3b] Length = 376 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 172/346 (49%), Positives = 229/346 (66%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL S DL A L+ E ++ + YS+A+T A L++ +P DPIARQF+P E Sbjct: 22 TLKSVADLVAAGLVAPEAAPALRAVEARYSVAVTAETAALLDRADPRDPIARQFLPDARE 81 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ LPEE DPIGD+ SP++G+VHRY DR+LLKLL VCP+YCRFCFRRE VG KG L Sbjct: 82 LDTLPEELADPIGDDAFSPVEGLVHRYSDRVLLKLLSVCPIYCRFCFRRESVGLGKGGSL 141 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S AL YI E+ +I+EVI TGGDPL LS +RL + + LR I HV +LR H+R P Sbjct: 142 SETALTRALDYIAERPRIFEVILTGGDPLALSARRLGLLAERLREIAHVAVLRIHTRAPT 201 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P + PE + L +GK VY+A+H NH E + A AI+R+ AG+ L+Q+VLL+G Sbjct: 202 VSPDLVTPERLAALTASGKAVYMALHVNHARELTPRAREAIARIQAAGVATLAQTVLLRG 261 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD + L LMR LR+KPYYLHHPDLA GT+HFRL+IEEG+ + L +ISG+ Sbjct: 262 VNDDADTLETLMRALTALRVKPYYLHHPDLAPGTAHFRLSIEEGRALHGELARRISGIAL 321 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P Y+LD+PGGYGKV + + +I++ G + + D H YP + + Sbjct: 322 PAYVLDIPGGYGKVPLQSPHIERNPAGDWLVRDRAGRAHAYPGEGA 367 >gi|295691014|ref|YP_003594707.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC 21756] gi|295432917|gb|ADG12089.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC 21756] Length = 346 Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust. Identities = 178/346 (51%), Positives = 238/346 (68%), Gaps = 5/346 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 KTL + L A LI E++ ++ ++ Y++A+TP +A LI+ +PNDPIARQF+P E Sbjct: 5 KTLRDVRSLAEAGLIPSERLAALEAVAARYAVAVTPAMAELIDTADPNDPIARQFVPAPE 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P E DPIGD+ HSP+ GI+HRYPDR+LLK H C VYCRFCFRREMVG + + Sbjct: 65 ELVASPGEDGDPIGDSIHSPVDGIIHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ +AA AYI + QIWEVI TGGDP +LS +RL ++ L I+HV+++RFH+RVP Sbjct: 125 LTPAQLDAAFAYIAARPQIWEVIVTGGDPFVLSSRRLAALIDRLEAIEHVKVVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 VDP + +L+ LK + K VY+A+HANH E + A AA + L +AGI ++SQ+VLLK Sbjct: 185 AVDPALVTDDLVAALKRSTKAVYVALHANHARELTPAARAACAHLVDAGIAMVSQTVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDPE L+ LMR FVE RIKPYYLHH DLA GT+H R TIE+GQ I+ +L+ +SGL Sbjct: 245 GVNDDPETLSALMRAFVETRIKPYYLHHGDLAPGTAHLRTTIEDGQAIMRALRGTLSGLA 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP Y+LD+PGG+GK + + G + D + H YPP + Sbjct: 305 QPTYVLDIPGGHGKAPVGPSYLSAGG-----VEDPNGRRHAYPPAA 345 >gi|154247831|ref|YP_001418789.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter autotrophicus Py2] gi|154161916|gb|ABS69132.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter autotrophicus Py2] Length = 362 Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust. Identities = 172/344 (50%), Positives = 233/344 (67%), Gaps = 1/344 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL S DL A L D + ++ Y++A+TP + + I+ +P DPIARQF+P E Sbjct: 19 TLRSGDDLVAAGLADARDRDALARVAERYAVAVTPTLVDAIDRTDPADPIARQFVPHPAE 78 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + PEE DPIGD HSP+ GIVHRY DR LLK++ VC VYCRFCFRREMVG L Sbjct: 79 LEVRPEELADPIGDEAHSPVPGIVHRYRDRALLKIVGVCAVYCRFCFRREMVGPGAAATL 138 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + E A AY+ +IWEVI TGGDP +LS +R+ +V+ L I HV+I+RFH+RVPI Sbjct: 139 SPEALERAFAYLSAHPEIWEVILTGGDPFMLSPRRMGEVMARLAAIAHVKIVRFHTRVPI 198 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 P+R++ LI LK G Y+A+H NH E + +A +A++R+A+AGI LLSQSVLL+G Sbjct: 199 AAPERVSDALIAALKAPGLTSYVAVHVNHARELTPDARSALARMADAGIPLLSQSVLLRG 258 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LA L R+ VE R+KPYYLHHPDLA GT+HFRL I GQ+++ +L+ ++SG+ Sbjct: 259 VNDEADTLAALFRSLVECRVKPYYLHHPDLAPGTAHFRLDIARGQELMRALRGRLSGIAL 318 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 P Y+LD+PGG GKV + +I G ++D+ VH YPP+ Sbjct: 319 PTYVLDIPGGAGKVPLTPGHIAPAGT-RLAVSDNCGGVHLYPPE 361 >gi|85717361|ref|ZP_01048313.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A] gi|85695836|gb|EAQ33742.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A] Length = 365 Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/356 (51%), Positives = 245/356 (68%), Gaps = 10/356 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 T+ +DL L + ++++++ Y+IA+TP +A LI+P +P+DPIARQ++P Sbjct: 10 STVRHPEDLIAHGLAPAAALADLEKVAARYAIAITPEVAGLIDPTDPDDPIARQYLPSAN 69 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P ER DPIGD+ HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T Sbjct: 70 ELAAQPGERADPIGDHAHSPVDGIVHRYPDRVLLKLIHVCAVYCRFCFRREMVGPAKETA 129 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS T AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R H+RVP Sbjct: 130 LSKSATTAALDYIRAHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVP 189 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + D R+ E++ L+ G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+ Sbjct: 190 VADSARVTDEMVAGLRTEGAATWLALHANHPRELTAAARAACARIVDAGIPMVSQSVLLR 249 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+EEGQ ++ +L+ ++SGLC Sbjct: 250 GVNDDAATLETLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEEGQLLMRALRGRVSGLC 309 Query: 306 QPFYILDLPGGYGKVKI--DTHNIKKVGNGS--------YCITDHHNIVHDYPPKS 351 QP Y+LD+PGGYGKV + D ++ + Y ITD+ VH YPP S Sbjct: 310 QPDYVLDIPGGYGKVPVGPDYMSLSDLTYRGGEHRPELRYHITDYCGGVHLYPPVS 365 >gi|75675833|ref|YP_318254.1| hypothetical protein Nwi_1641 [Nitrobacter winogradskyi Nb-255] gi|74420703|gb|ABA04902.1| L-lysine 2,3-aminomutase [Nitrobacter winogradskyi Nb-255] Length = 366 Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust. Identities = 181/355 (50%), Positives = 242/355 (68%), Gaps = 10/355 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 TL +DL L + ++++++ Y+IA+TP +ANLI+P +P+DPIARQ++P + Sbjct: 11 STLRRPEDLIAHGLAPAAALADLEKVAARYAIAITPEVANLIDPADPDDPIARQYLPSAD 70 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL ER DPIGD+ SP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T Sbjct: 71 ELAAQAYERADPIGDHARSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETA 130 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS T AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R H+RVP Sbjct: 131 LSKSATAAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVP 190 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP R+ E+ L+ G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+ Sbjct: 191 VADPARVTDEMAAALRTDGATTWLALHANHPRELTAAARAACARIIDAGIPMVSQSVLLR 250 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDD L LMR FV+ RIKPYYLHH DLA GT+H R T+E+GQ ++ L+ ++SGLC Sbjct: 251 GVNDDAATLEALMRAFVQCRIKPYYLHHGDLAPGTAHLRTTLEQGQALMRELRGRVSGLC 310 Query: 306 QPFYILDLPGGYGKVKIDTHNIKK----VGNGS------YCITDHHNIVHDYPPK 350 QP Y+LD+PGGYGK + + G G Y ITD+ VH YPPK Sbjct: 311 QPDYVLDIPGGYGKSPVGPGYMSPSDLISGAGEHRPELHYLITDYCGGVHLYPPK 365 >gi|92117823|ref|YP_577552.1| hypothetical protein Nham_2300 [Nitrobacter hamburgensis X14] gi|91800717|gb|ABE63092.1| L-lysine 2,3-aminomutase [Nitrobacter hamburgensis X14] Length = 366 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 182/355 (51%), Positives = 244/355 (68%), Gaps = 10/355 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 TL +DL L + ++ ++ Y+IA+TP +A+LI+P +P+DPIARQ++P + Sbjct: 11 STLRQPEDLIAHGLAPAAALPDLARVAARYAIAVTPEVASLIDPDDPDDPIARQYLPSVD 70 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P ER DPIGD HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T Sbjct: 71 ELAAQPGERADPIGDRAHSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETA 130 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R HSRVP Sbjct: 131 LSKSAATAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAGIGHVKIVRIHSRVP 190 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP R++ E++ LK AG ++A+HANHP E + A +A +R+ +AGI ++SQSVLL+ Sbjct: 191 VADPTRVSDEMVAALKAAGATTWLALHANHPRELTAAARSACARIVDAGIPMVSQSVLLR 250 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+E+G+ ++ +L+ ++SGLC Sbjct: 251 GVNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEQGRALMRALRGRVSGLC 310 Query: 306 QPFYILDLPGGYGKVKIDTHNIKK----VGNGS------YCITDHHNIVHDYPPK 350 QP Y+LD+PGGYGK + + + G G Y I D+ VH YPPK Sbjct: 311 QPDYVLDIPGGYGKSPVGPDYLSQSDLTFGEGEHRPESRYRIVDYCGGVHLYPPK 365 >gi|91976978|ref|YP_569637.1| hypothetical protein RPD_2506 [Rhodopseudomonas palustris BisB5] gi|91683434|gb|ABE39736.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB5] Length = 363 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 183/350 (52%), Positives = 249/350 (71%), Gaps = 4/350 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L L + D++++++ Y+IA+TP IA LI+P +P+DPIARQ+IP+ EE Sbjct: 14 TLRQPAELIAQGLAPADAQDDLEQVAQRYAIAVTPDIAALIDPDDPDDPIARQYIPRAEE 73 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L LP ER+DPIGD HSP++GIVHR+ DR+LLKL+HVC VYCRFCFRREMVG K L Sbjct: 74 LATLPIERDDPIGDGAHSPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRREMVGPGKDNSL 133 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S T AAL YI+ +IWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+R+P+ Sbjct: 134 SGDATAAALGYIRAHPEIWEVILTGGDPLMLSPRRLADIMAELATIDHVRIIRFHTRLPV 193 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 +P RI+ EL++ L+ GK V++A+HANHP E + A AA +R+ +AGI ++SQSVLL G Sbjct: 194 AEPARISAELVRALRVEGKTVWMALHANHPRELTTAARAACARIIDAGIPMVSQSVLLAG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMR FVE RIKPYYLHH DLA GT+H R ++ EGQ ++ +L+ ++SGLCQ Sbjct: 254 VNDDAATLEALMRVFVECRIKPYYLHHGDLAPGTAHLRTSLAEGQALMRALRGRVSGLCQ 313 Query: 307 PFYILDLPGGYGKVKIDTHNIKK----VGNGSYCITDHHNIVHDYPPKSS 352 P Y+LD+PGGYGK + + + + Y ++D+ VH YPPK + Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLAADDGTAADSRYRVSDYCGDVHLYPPKPA 363 >gi|27379499|ref|NP_771028.1| hypothetical protein blr4388 [Bradyrhizobium japonicum USDA 110] gi|27352651|dbj|BAC49653.1| blr4388 [Bradyrhizobium japonicum USDA 110] Length = 364 Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust. Identities = 172/357 (48%), Positives = 241/357 (67%), Gaps = 11/357 (3%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL +L +L + ++ ++ Y++A+TP + LI+ +P+DPIARQF+P Sbjct: 8 RTLREPAELVAEHLAPAAALPALERVAARYAVAITPALVELIDTSDPDDPIARQFVPTAA 67 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + P E DPIGD+ HSP+ GIVHRYPDR+L KL+HVC VYCRFCFRREMVG K Sbjct: 68 ELEMQPGESADPIGDHPHSPVPGIVHRYPDRVLFKLVHVCAVYCRFCFRREMVGPGKDNA 127 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS AA+ YI+ +IWEVI TGGDPL+LS +R+ +++ L I HV+I+R H+RVP Sbjct: 128 LSDSAYRAAVDYIRAHDEIWEVILTGGDPLMLSPRRMSEIMADLAGIDHVKIIRLHTRVP 187 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP R++ E++ LK AG ++A+HANH E +E A AA +RL +AGI ++SQSVLL+ Sbjct: 188 VADPARVSDEMVAALKVAGATTWVALHANHARELTEGARAACARLVDAGIPMVSQSVLLR 247 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ L++LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ+++ L+ ++SGLC Sbjct: 248 GVNDNVTALSDLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQELMRQLRGRVSGLC 307 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGS-----------YCITDHHNIVHDYPPKS 351 QP Y++D+PGG GK + + + N + Y I D+ VH YPP++ Sbjct: 308 QPDYVIDIPGGAGKSPVGPNYVLAAQNTAPDAREAATETRYRIVDYCGDVHLYPPET 364 >gi|288959461|ref|YP_003449802.1| lysine 2,3-aminomutase [Azospirillum sp. B510] gi|288911769|dbj|BAI73258.1| lysine 2,3-aminomutase [Azospirillum sp. B510] Length = 345 Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust. Identities = 174/343 (50%), Positives = 231/343 (67%), Gaps = 2/343 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPNDPIARQFIPQK 64 K L S DL A L+ E D ++ +++ Y++ALTP + L +P DP+ Q++P Sbjct: 2 KALHSVSDLVAAGLMTAEAGDAVRTVADRYAVALTPYLREALAGRTDPQDPLYAQYVPSP 61 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E + PEEREDPIGD SP+KGIVHRYPDR+LLK LH C VYCRFCFRREMVG G Sbjct: 62 AEAHSTPEEREDPIGDVARSPVKGIVHRYPDRVLLKPLHACAVYCRFCFRREMVGP-GGE 120 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 L++++ +AALAYI++ Q+WEV+ TGGDPL+LS +RL+ +++ L + HV ++R HSR+ Sbjct: 121 ALTAEELDAALAYIRDHEQVWEVVITGGDPLLLSPRRLRGIVQALSAMPHVGVVRLHSRI 180 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P DP R+ PEL++ L +IA+H NH E + AA++RL AGI L+ Q+VLL Sbjct: 181 PAADPDRLTPELVEALTAPDLATWIAVHINHADELTAPVRAALARLVGAGIPLVGQTVLL 240 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 KGIND L L R V R+KPYYLHHPDLAAGTSHFR T+ EG+ +V L+ K+SGL Sbjct: 241 KGINDSHAALEALFRGMVRNRVKPYYLHHPDLAAGTSHFRPTLAEGRALVTGLRGKLSGL 300 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 CQP Y+LD+PGG+GK I++ G Y +TD VHDY Sbjct: 301 CQPTYVLDIPGGHGKAPAAPAWIEEEGEERYRVTDFTGRVHDY 343 >gi|16124969|ref|NP_419533.1| L-lysine 2,3-aminomutase [Caulobacter crescentus CB15] gi|13421941|gb|AAK22701.1| L-lysine 2,3-aminomutase, putative [Caulobacter crescentus CB15] Length = 345 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 176/346 (50%), Positives = 242/346 (69%), Gaps = 5/346 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL A+ L A L+ E++ ++ ++ Y++A+TP +A LI+P +DPIARQF+P E Sbjct: 5 QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + + Sbjct: 65 ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ +AA AYI ++ QIWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+RVP Sbjct: 125 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 VDP + PEL+ LK + K VY+A+HANH E + A AA +++ +AG+ ++SQ+VLL+ Sbjct: 185 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+PE L LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+ +SGL Sbjct: 245 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP Y+LD+PGG+GKV + + + +G+ + D V YPP + Sbjct: 305 QPTYVLDIPGGHGKVPVGPNYLS---DGA--VEDPDGAVRPYPPTA 345 >gi|221233690|ref|YP_002516126.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000] gi|220962862|gb|ACL94218.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000] Length = 358 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 176/346 (50%), Positives = 242/346 (69%), Gaps = 5/346 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL A+ L A L+ E++ ++ ++ Y++A+TP +A LI+P +DPIARQF+P E Sbjct: 18 QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 77 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + + Sbjct: 78 ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 137 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ +AA AYI ++ QIWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+RVP Sbjct: 138 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 197 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 VDP + PEL+ LK + K VY+A+HANH E + A AA +++ +AG+ ++SQ+VLL+ Sbjct: 198 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 257 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+PE L LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+ +SGL Sbjct: 258 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 317 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP Y+LD+PGG+GKV + + + +G+ + D V YPP + Sbjct: 318 QPTYVLDIPGGHGKVPVGPNYLS---DGA--VEDPDGAVRPYPPTA 358 >gi|115524934|ref|YP_781845.1| hypothetical protein RPE_2928 [Rhodopseudomonas palustris BisA53] gi|115518881|gb|ABJ06865.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisA53] Length = 361 Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust. Identities = 177/348 (50%), Positives = 245/348 (70%), Gaps = 4/348 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL S +L L EQ+ + E+++ Y++A+T +A+LI+P +PNDPIARQ+IP + Sbjct: 12 RTLRSPAELVARGLAPAEQLAALDEVASRYAVAVTAAVADLIDPADPNDPIARQYIPSAQ 71 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL I ER DPIGD HSP+ GIVHR+ DR+L KL+ VC VYCRFCFRREMVG K + Sbjct: 72 ELVISAAERADPIGDAAHSPVAGIVHRHADRVLFKLVSVCAVYCRFCFRREMVGPGKDSA 131 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS + AA+ YI+ +IWEVI TGGDPL+LS +RL++V+ L I+HV+I+RFH+RVP Sbjct: 132 LSPQAYRAAIDYIRAHGEIWEVILTGGDPLMLSPRRLEEVMADLAAIEHVKIVRFHTRVP 191 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + +P RI+ +L+ LK G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+ Sbjct: 192 VAEPSRISRDLVAALKADGVTTWVALHANHPRELTAAARAACARMVDAGIAMVSQSVLLR 251 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDD + LA LMR FVE RIKPYYLHH DLA GT+H R T+ EG++++ L+ ++SGLC Sbjct: 252 GVNDDADTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGRELMRQLRGRVSGLC 311 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGS----YCITDHHNIVHDYPP 349 QP Y+LD+PGG+GK + + V + Y + D+ H YPP Sbjct: 312 QPDYVLDIPGGFGKAPVGPEYLSPVASSVETQHYRVMDYCGDTHLYPP 359 >gi|83310383|ref|YP_420647.1| lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1] gi|82945224|dbj|BAE50088.1| Lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1] Length = 344 Score = 363 bits (933), Expect = 1e-98, Method: Compositional matrix adjust. Identities = 170/342 (49%), Positives = 231/342 (67%), Gaps = 6/342 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL +AQDL++A LI ++ + ++ Y++ALTP + +LI+P +P DPIARQ++P E Sbjct: 5 RTLRTAQDLHDAGLIPS--VEAVAGVAEAYAVALTPAVVDLIDPADPADPIARQYVPSAE 62 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL PEE DPIGD +SP+KG+VHRYPDR+LL L VCPVYCRFCFRR VG T Sbjct: 63 ELVTTPEELADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVGDGDAT- 121 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 ++ + + ALAY+ + +I EVI TGGDPL+L RL +L + I HV+++R HSRVP Sbjct: 122 MTEAEIDTALAYVAGRPEIREVILTGGDPLMLPPPRLAALLGRIGAIAHVELIRIHSRVP 181 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP+R+ P+L + L KPV++A+H NHP+E S A + RLA G+ LLSQ+VLLK Sbjct: 182 VSDPERVTPDLARVLGGGDKPVWLAVHVNHPHELSPLARGGLERLARTGVPLLSQTVLLK 241 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND +L L R V R++PYYLHHPDLA GTSHFR TIEEGQ ++ SL+ ++SG+ Sbjct: 242 GVNDSVSVLDELFRALVRNRVRPYYLHHPDLAPGTSHFRPTIEEGQALMRSLRGRLSGIA 301 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 QP Y+LD+PGG GKV + + D +HDY Sbjct: 302 QPTYVLDIPGGAGKVPVGPQYWDGEAG---TVADPGGRLHDY 340 >gi|323138167|ref|ZP_08073240.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC 49242] gi|322396629|gb|EFX99157.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC 49242] Length = 363 Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 170/320 (53%), Positives = 222/320 (69%), Gaps = 2/320 (0%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 ++ + + YS+A+TP +A LI+ +P DPIARQF+P EL LP+E DPIGD+ HSP Sbjct: 42 LRGVESQYSVAVTPDMAALIDAADPADPIARQFLPDARELVTLPQELADPIGDDAHSPAP 101 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 G+VHRYPDR+LLKLL VCPVYCRFCFRRE VG KG VLS + T+AAL YI QI+EV Sbjct: 102 GLVHRYPDRVLLKLLTVCPVYCRFCFRRETVGRGKGDVLSPEATDAALDYIAGHRQIFEV 161 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 I TGGDPL+LS +RL V + L I HV +LR H+R P P + E + L+E+GK + Sbjct: 162 ILTGGDPLLLSGRRLSAVARRLAKIPHVAVLRVHTRAPTAAPDLVTQERLDALRESGKAL 221 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 Y+A+H NH E + A AAI+RL AG LLSQ+VLLKG+NDD + L LMR V LR+K Sbjct: 222 YVALHVNHSRELTPAARAAIARLHEAGATLLSQTVLLKGVNDDADTLERLMRDLVALRVK 281 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327 PYYLHHPDLA GTSHFRL+++ G ++ + L +++G+ P Y+LD+PGG+GK + + Sbjct: 282 PYYLHHPDLAPGTSHFRLSLDAGLRVHSELTRRVTGVAVPRYVLDIPGGFGKAPVS--DA 339 Query: 328 KKVGNGSYCITDHHNIVHDY 347 + G G + I D VH Y Sbjct: 340 ETDGEGGWRIADRSGRVHLY 359 >gi|146340545|ref|YP_001205593.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278] gi|146193351|emb|CAL77367.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278] Length = 364 Score = 363 bits (931), Expect = 2e-98, Method: Compositional matrix adjust. Identities = 180/358 (50%), Positives = 238/358 (66%), Gaps = 10/358 (2%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R TL SA DL L + ++ ++ Y++A+T +A+LI+ +P+DPIARQF+P Sbjct: 6 RPTTLRSAADLVAQGLADPGEQATLERVAQRYAVAVTTHLADLIDSDDPDDPIARQFVPS 65 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 +EL P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K Sbjct: 66 ADELVGAPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 LS AL YI+ +IWEVI TGGDPL+LS +RL +++ L I+HV+I+R H+R Sbjct: 126 NALSEDAYCGALDYIRAHGEIWEVILTGGDPLMLSPRRLAEIMADLAAIEHVRIIRIHTR 185 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 +P+ DP RI P L++ LK G +++A+HANHP E S + AA +RL +AGI L+SQSVL Sbjct: 186 LPVADPARITPGLVEALKVKGAAIWVALHANHPRELSPDVRAACARLVDAGIPLVSQSVL 245 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ ++SG Sbjct: 246 LRGVNDDAATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLAEGQALIRALRGRVSG 305 Query: 304 LCQPFYILDLPGGYGKVKIDTHNI----------KKVGNGSYCITDHHNIVHDYPPKS 351 LCQP Y+LD+PGGYGK + I Y + D+ H YPP Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYITAEESVAQDHAAAAQTRYRVVDYCGEAHLYPPAG 363 >gi|298292101|ref|YP_003694040.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM 506] gi|296928612|gb|ADH89421.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM 506] Length = 385 Score = 362 bits (928), Expect = 6e-98, Method: Compositional matrix adjust. Identities = 178/342 (52%), Positives = 241/342 (70%), Gaps = 3/342 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL +L A+L+ + + ++ Y++A+TP +A LI+P +P DPIARQF+P Sbjct: 16 RTLRRLDELVEASLVAPDP--RLDAVAARYAVAVTPTLAGLIDPADPADPIARQFVPDAR 73 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E+ LPEE EDPIGD HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG T Sbjct: 74 EIETLPEELEDPIGDEAHSPVAGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETS 133 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS + EAALAY+ ++WEV+ TGGDPL+ + +RL +++ L I HV+I+RFH+RVP Sbjct: 134 LSEEALEAALAYVAAHPEVWEVVVTGGDPLVAAPRRLADLMRRLAAIDHVKIVRFHTRVP 193 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 I P+R+ P L+ L+ AG Y A+HANH E EA AA++RLA+AGI L+ QSVLL Sbjct: 194 IASPERVTPALVDSLRAAGLTTYAAVHANHARELGPEARAALARLADAGIALVGQSVLLA 253 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDD + L+ L R VE R+KPYYLHHPDLA GT+HFRLTIE GQ+++ +L+ ++SGL Sbjct: 254 GVNDDADTLSALFRALVENRVKPYYLHHPDLAPGTAHFRLTIERGQELMRALRGRVSGLA 313 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LD+PGG+GKV + ++ G + +TD+ VH Y Sbjct: 314 IPTYVLDIPGGFGKVPVGPGYLEPTPEG-WRVTDYCGGVHAY 354 >gi|23014062|ref|ZP_00053900.1| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum MS-1] Length = 343 Score = 361 bits (926), Expect = 1e-97, Method: Compositional matrix adjust. Identities = 174/351 (49%), Positives = 236/351 (67%), Gaps = 16/351 (4%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 +R TL +AQDL +A LI+ +++++ Y++ LTP + +LI+P +P DPIARQ++P Sbjct: 4 VRRHTLRTAQDLLDAGLIRDAA--AVEQVARTYAVGLTPAVVDLIDPADPADPIARQYVP 61 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 EEL EER DPIGD +SP+KG+VHRYPDR+LL L VCPVYCRFCFRR VG + Sbjct: 62 SPEELTTTAEERADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVGDGE 121 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 T ++ + EAALAY+ + I EVI TGGDPL+L RL +L + I HV+++R HS Sbjct: 122 AT-MTEAEIEAALAYVACRPDIREVILTGGDPLMLPAPRLGALLDRIGAIGHVELIRIHS 180 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 RVP+ DP RI P+L L KPV++A+H NHP E S A A +S LA AG+ LLSQ+V Sbjct: 181 RVPVSDPGRITPDLATVLGGGDKPVWLAVHVNHPREVSPLASAGLSMLARAGVPLLSQTV 240 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKG+ND ++L +L R + R++PYYLHHPDLA GTSHFR +I+EGQ ++ L+ ++S Sbjct: 241 LLKGVNDRADVLDDLFRALIRNRVRPYYLHHPDLAPGTSHFRPSIKEGQALMRVLRGRLS 300 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY-----CITDHHNIVHDYP 348 G+ QP Y+LD+PGG GKV VG G + + D ++ H YP Sbjct: 301 GIAQPTYVLDIPGGAGKV--------PVGPGYWDGEEGVVIDPNDAEHSYP 343 >gi|158424552|ref|YP_001525844.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571] gi|158331441|dbj|BAF88926.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571] Length = 375 Score = 360 bits (924), Expect = 2e-97, Method: Compositional matrix adjust. Identities = 167/342 (48%), Positives = 228/342 (66%), Gaps = 1/342 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 TL +A DL A L + + + Y++A+TP + ++ + +DPIARQF+P Sbjct: 29 STLRTADDLIAAGLAPAAERAVLDAVGARYAVAVTPELVAAMDRTDASDPIARQFVPDVA 88 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P+E DPIGD+ HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG T Sbjct: 89 ELRTDPQELVDPIGDDAHSPVPGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETA 148 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ E AL Y+ ++WEVI TGGDP ++S +R+ V+ L I HV+++RFH+RVP Sbjct: 149 LTPDMLERALGYVAAHPEVWEVILTGGDPFMVSPRRMADVVGRLAAIPHVKVVRFHTRVP 208 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 I P+R++ E+++ LK G Y+A+H NH E + A AA+ RLA+AGI LLSQ+VLLK Sbjct: 209 IAAPERVSEEMVRALKAPGVAAYVAVHVNHARELGDAATAALGRLADAGIPLLSQTVLLK 268 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND E L L R VE R+KPYYLHHPDLA GT HFRL++ EGQ +V +L+ ++SG+ Sbjct: 269 GVNDRVETLDALFRALVERRVKPYYLHHPDLAPGTGHFRLSVPEGQALVRALRGRLSGIA 328 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 QP Y+LD+PGG GKV + + G G + + D+ +H Y Sbjct: 329 QPTYVLDIPGGAGKVPLTPGYLTPQGAG-WHVADNCGGIHAY 369 >gi|254292405|ref|YP_003058428.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC 49814] gi|254040936|gb|ACT57731.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC 49814] Length = 348 Score = 358 bits (919), Expect = 7e-97, Method: Compositional matrix adjust. Identities = 165/344 (47%), Positives = 236/344 (68%), Gaps = 1/344 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 KTL SAQD N + E I +S Y++A+T +A+ + + +DP+ RQF+P + Sbjct: 3 KTLKSAQDFKNLGITSPEITQNIDTVSTKYAVAMTTELADCVKNPSSDDPVLRQFLPLID 62 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL LPEEREDPIGD ++P++GIVHR+ DR+LLK++ +CPVYCRFCFRREMVG K + Sbjct: 63 ELTTLPEEREDPIGDWPNTPVEGIVHRHKDRVLLKIVSICPVYCRFCFRREMVGPDKDNM 122 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + +AA+ YI +IWEVI TGGDP++LS +R +++ + L I HV+I+R+H+R+P Sbjct: 123 LRPEQLDAAIDYIANHPEIWEVILTGGDPMMLSPRRARELTQRLEAIPHVKIIRWHTRMP 182 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + P + E Q +K + K V++A+HANH EFS A A + L +AGI ++SQSVLLK Sbjct: 183 VAKPDIVTAEYAQAIKSSTKSVFVALHANHANEFSNAAKQACANLIDAGIPMVSQSVLLK 242 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ + L++LMRTFVE RI+PYYLHHPD A GTSHFR+++EEGQK+V L+ +SGLC Sbjct: 243 GVNDNLDALSDLMRTFVENRIRPYYLHHPDFAPGTSHFRVSVEEGQKLVQGLRNTLSGLC 302 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349 P Y++D+PGG K + +++ +G + YPP Sbjct: 303 TPTYVVDIPGGVSKAIATPSDAREI-DGQLSLRGQDGQWRAYPP 345 >gi|83591564|ref|YP_425316.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170] gi|83574478|gb|ABC21029.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170] Length = 324 Score = 357 bits (917), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 170/317 (53%), Positives = 219/317 (69%), Gaps = 2/317 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +L S DL A LI E++ E+ + Y++A+ +A I P+ +ARQF+P E Sbjct: 6 SLRSLTDLAEAGLIAPERLAELAPVVARYALAIPAGLAQAIAEAGPDSALARQFVPSAAE 65 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L LPEE DPIGD+ HSP+KG+VHRYPDR+LLK +H CPVYCRFCFRRE VG G L Sbjct: 66 LTTLPEEITDPIGDHAHSPVKGLVHRYPDRVLLKPVHACPVYCRFCFRREHVG-PGGESL 124 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + LAYI + +IWEV+ +GGDP+ILS +RL +L L I H+ LR HSRVP+ Sbjct: 125 SEAEMARVLAYIGDHREIWEVVLSGGDPMILSARRLDALLGALEAIPHIGSLRIHSRVPV 184 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 +DP RI P +I L+ + KPV++ IHANHP EF+ A A ++ LA+AG+ LLSQSVLLKG Sbjct: 185 LDPARITPAVIAALRRS-KPVWLVIHANHPDEFTAAARACVASLADAGVPLLSQSVLLKG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMRTFV RIKPYYLH D+A GT+HFR +++EG+ +VA+L+ SGLCQ Sbjct: 244 VNDDLATLTRLMRTFVANRIKPYYLHQTDMAPGTAHFRTSLDEGRALVAALRATASGLCQ 303 Query: 307 PFYILDLPGGYGKVKID 323 P Y+LD P G GK ID Sbjct: 304 PTYVLDAPDGPGKRPID 320 >gi|114797088|ref|YP_761814.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444] gi|114737262|gb|ABI75387.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444] Length = 349 Score = 356 bits (913), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 163/323 (50%), Positives = 227/323 (70%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T A +L A +I +Q+ + ++ +Y IAL +A LI+ +P DPI Q++P EE Sbjct: 5 TYRHAGELLTAGIISADQLPVVSRVAENYVIALPARLATLIDRDDPLDPIGLQYVPSGEE 64 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 LN P E +DPIGD HSP+ GIVHRYPDR+LLK+ CPVYCRFCFRRE VG +KG L Sbjct: 65 LNAQPGEMDDPIGDAAHSPIPGIVHRYPDRVLLKITSTCPVYCRFCFRRERVGPEKGDAL 124 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + +AA AYI ++ +I+EVI TGGDP+ILS R + + L I HV+++R+HSRVP+ Sbjct: 125 SKAEIDAACAYIADRPEIFEVILTGGDPMILSPARAGALTRRLEAIDHVKVIRWHSRVPV 184 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 P+R+ PE + ++ + K V++A+HANH EF+ EA+AAI RL+ AGI L+SQSVLL+G Sbjct: 185 AAPERVTPEFTEAIRSSEKAVFVAVHANHAREFTPEAVAAIRRLSQAGISLVSQSVLLRG 244 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND E LA+LMR F+ + IKPYYLH D A GTSHFR+ +EEGQ +V L++++SGL Sbjct: 245 VNDTFEALADLMRAFLSVGIKPYYLHQLDAAPGTSHFRVPVEEGQALVRRLRDELSGLAT 304 Query: 307 PFYILDLPGGYGKVKIDTHNIKK 329 P Y+ D+PGG K ++ +I++ Sbjct: 305 PTYVADIPGGVSKAVMNLPDIER 327 >gi|148255402|ref|YP_001239987.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1] gi|146407575|gb|ABQ36081.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1] Length = 364 Score = 355 bits (912), Expect = 4e-96, Method: Compositional matrix adjust. Identities = 180/358 (50%), Positives = 240/358 (67%), Gaps = 10/358 (2%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R TL SA DL L ++ ++ Y++A+T +A+LI+ +P+DPIARQF+P Sbjct: 6 RPTTLRSAADLVAQGLAAPSDEATLERVAQRYAVAVTTHLADLIDADDPDDPIARQFVPS 65 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 +EL P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K Sbjct: 66 ADELKAHPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 LS + AALAYI+ +IWEVI TGGDPL+LS +RL++++ L I HV+I+R H+R Sbjct: 126 NALSEEAYRAALAYIRSHGEIWEVILTGGDPLMLSPRRLKEIMADLAAIDHVRIIRIHTR 185 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 +P+ DPQRI L+ LK G ++A+HANHP E + +A +RL +AGI L+SQSVL Sbjct: 186 LPVADPQRITAALVDALKVQGAATWVALHANHPRELNAAVRSACARLIDAGIPLVSQSVL 245 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+E GQ ++ +L+ ++SG Sbjct: 246 LRGVNDDVATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLEHGQSLLRALRGRVSG 305 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIK---------KVGNGS-YCITDHHNIVHDYPPKS 351 LCQP Y+LD+PGGYGK + + G + Y + D+ H YPP + Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYLTAEDFVEQDHAAGTQTRYRVIDYCGEAHLYPPAA 363 >gi|197106130|ref|YP_002131507.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1] gi|196479550|gb|ACG79078.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1] Length = 341 Score = 355 bits (911), Expect = 6e-96, Method: Compositional matrix adjust. Identities = 171/346 (49%), Positives = 235/346 (67%), Gaps = 8/346 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + L + +DL A L ++ + ++ Y++A+TP +A L + +ARQF+P Sbjct: 3 RPLRTPEDLIAAGLAPAAALEGLARVAERYAVAITPDMAGL---SETCEGVARQFVPTAA 59 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL PEER DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + Sbjct: 60 ELVQTPEERADPIGDEAHSPVEGIVHRYPDRVLLKANHACAVYCRFCFRREMVGPEGVRP 119 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS +AA+AY+ + +IWEVI TGGDPLILS +RL + L I HV+++RFH+RVP Sbjct: 120 LSPAALDAAMAYVAARPEIWEVIVTGGDPLILSPRRLADIGARLAGIPHVKVVRFHTRVP 179 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 VDP ++ +++ LK +GK V++A+HANHP E + A+AA +R+ +AGI ++SQ+VLLK Sbjct: 180 AVDPGKVTAGVVEALKASGKTVWVALHANHPDELTPAALAACARIVDAGIPMVSQTVLLK 239 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GINDDP++L LMR FVE RIKPYYLHH DLA GT HFR T+ EGQ ++ +L+ ++SGL Sbjct: 240 GINDDPDVLDALMRRFVETRIKPYYLHHGDLAPGTGHFRATLAEGQDLMRALRGRLSGLA 299 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP Y+LD+PGG+GK + + G + D H YPP++ Sbjct: 300 QPTYVLDIPGGHGKAPVGPAYVH---GGE--VEDPQGRRHAYPPEA 340 >gi|90424304|ref|YP_532674.1| hypothetical protein RPC_2807 [Rhodopseudomonas palustris BisB18] gi|90106318|gb|ABD88355.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18] Length = 368 Score = 355 bits (910), Expect = 8e-96, Method: Compositional matrix adjust. Identities = 178/349 (51%), Positives = 237/349 (67%), Gaps = 4/349 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L L+ +Q+ + ++ Y++A+T +A LI+P +P+DPIARQ+IP E Sbjct: 20 TLRQPAELAARGLVAADQLPTLDAVAQRYAVAVTEAVAALIDPTDPDDPIARQYIPSAAE 79 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L P ER DPIGD H+PL GIVHR+ DR+L KL++VC VYCRFCFRRE VG K L Sbjct: 80 LVRDPVERADPIGDAAHAPLDGIVHRHTDRVLFKLVNVCAVYCRFCFRRETVGPGKAATL 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + AAL YI+ +IWEVI TGGDPL+LS +RL + + L I HV+I+R HSRVP+ Sbjct: 140 SGEAYRAALDYIRAHPEIWEVILTGGDPLMLSPRRLGEAMSDLAAIDHVKIIRIHSRVPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 +P RI+ EL+ L+ +G V++A+HANHP E S A AA +R+ +AGI ++SQSVLL+G Sbjct: 200 AEPSRISRELVGALQVSGATVWMALHANHPRELSAAARAACARIIDAGIPMVSQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD LA LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ L+ ++SGLCQ Sbjct: 260 VNDDGPTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRQLRGRVSGLCQ 319 Query: 307 PFYILDLPGGYGKVKID----THNIKKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGGYGK + T + + Y +TD+ H YPP S Sbjct: 320 PDYVLDIPGGYGKAPVGPNYLTPADEPAADLRYRVTDYCGDAHLYPPTS 368 >gi|46203355|ref|ZP_00051632.2| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum MS-1] Length = 312 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 163/309 (52%), Positives = 213/309 (68%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L S L A LI + ++ ++ Y++++T +A LI P P+DPIARQF+P+ EE Sbjct: 4 ALKSTAALARAGLIDAAVLPVLERVAARYAVSVTADMAELIEPGRPDDPIARQFVPRAEE 63 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L P ER DPIGD+ H P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG + L Sbjct: 64 LETNPRERADPIGDDVHEPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPEGQGSL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + A YI + +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+ Sbjct: 124 SEAELAVAYRYIADHPEIWEVVVTGGDPFALSPRRLAGIAEALAAIPHVRVLRFHTRVPM 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V+P RI+ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G Sbjct: 184 VEPARIDERLVAALKRFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD + L LMR FVE RIKPYYLH DLA GT H R T+ EGQ ++ L+ ++SGL Q Sbjct: 244 VNDDADTLEALMRGFVENRIKPYYLHQGDLAPGTGHLRTTLPEGQALMRRLRGRLSGLAQ 303 Query: 307 PFYILDLPG 315 P Y+LD+P Sbjct: 304 PLYVLDIPA 312 >gi|144898375|emb|CAM75239.1| Protein of unknown function DUF160 [Magnetospirillum gryphiswaldense MSR-1] Length = 353 Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 162/346 (46%), Positives = 233/346 (67%), Gaps = 9/346 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 ++L DL A L+ + Q + ++ IA+TP +A+LI+ + DPIARQ++P Sbjct: 13 RSLRRVDDLIGAGLVDESQRAALDAVARSSVIAITPAVADLIDAGDAADPIARQYVPNAA 72 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL++ EER DPIGD+ SP+KG+VHRYPDR LLK + VCPVYCRFCFRRE VG GT Sbjct: 73 ELHVAAEERADPIGDDAFSPVKGVVHRYPDRALLKPILVCPVYCRFCFRREAVGDADGT- 131 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS+ + + ALAY+ ++ + E+I TGGDPL+L+ RL ++ + + H+++LRFHSRVP Sbjct: 132 LSAAELDEALAYLAGQTDLREIIVTGGDPLMLNAARLADLVARIAQLPHIEVLRFHSRVP 191 Query: 186 IVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 + DP+R++ + LK V++++H NHP E S A A+ RLA+AG+ L+SQSVLL Sbjct: 192 VADPERVSSAMASALKSTETLAVWVSVHVNHPRELSAIAGKALRRLADAGVPLVSQSVLL 251 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 KG+NDDP +L L R + R++PYYLHHPDL GTSHFR ++ EGQ I+ +L+ ++SG+ Sbjct: 252 KGVNDDPAVLEELFRALIRNRVRPYYLHHPDLTRGTSHFRPSLAEGQAIMRALRGRLSGI 311 Query: 305 CQPFYILDLPGGYGKVKI--DTHNIKKVGNGSYCITDHHNIVHDYP 348 QP Y+LD+PGG GKV + D + +++ +TD H YP Sbjct: 312 AQPTYVLDIPGGAGKVPVGPDWWDGERL-----QVTDWRGRRHPYP 352 >gi|329114964|ref|ZP_08243719.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001] gi|326695407|gb|EGE47093.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001] Length = 349 Score = 323 bits (828), Expect = 2e-86, Method: Compositional matrix adjust. Identities = 156/325 (48%), Positives = 214/325 (65%), Gaps = 4/325 (1%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R KTL + DL A L+ +Q + + +++ HY+ A+ P +LI +P+DPI Q +P Sbjct: 11 RRKTLRTPDDLIAAGLVPPQQHEMLDDVAQHYATAIPPAFLDLIT--SPDDPIGVQVVPS 68 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 +EL I PEER DPIGDN SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G Sbjct: 69 AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 VL E AL +++ QI EVI TGGDPL+LS +RL ++ L + HV +R HSR Sbjct: 129 -VLDDAALEQALEWLRTHKQIREVILTGGDPLMLSPRRLGHIVAELSRMPHVTTIRVHSR 187 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+ DP+R+ L+ L E K +++A+H NH E SE A A + R+ GI LL QSVL Sbjct: 188 VPVADPERVTDALLDAL-ETNKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+ND + L +L R VE R++PYYLH D A GT+HF + +EEGQ+++A L+ +++G Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIK 328 L P Y+LD+PGGYGKV + ++ Sbjct: 307 LAWPLYVLDIPGGYGKVPLGPEYVQ 331 >gi|258541375|ref|YP_003186808.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01] gi|256632453|dbj|BAH98428.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01] gi|256635510|dbj|BAI01479.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-03] gi|256638565|dbj|BAI04527.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-07] gi|256641619|dbj|BAI07574.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-22] gi|256644674|dbj|BAI10622.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-26] gi|256647729|dbj|BAI13670.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-32] gi|256650782|dbj|BAI16716.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653773|dbj|BAI19700.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-12] Length = 349 Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust. Identities = 156/319 (48%), Positives = 211/319 (66%), Gaps = 4/319 (1%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R KTL + DL A L+ +Q + + +++ HY+ A+ P +LI P+DPI Q +P Sbjct: 11 RRKTLRTPDDLIAAGLVPPKQHEMLDDVAQHYATAIPPAFLDLIT--APDDPIGVQVVPS 68 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 +EL I PEER DPIGDN SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G Sbjct: 69 AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 VL E AL +++ QI EVI TGGDPL+LS +RL ++ L + HV +R HSR Sbjct: 129 -VLDDAALEQALEWLRTHEQIREVILTGGDPLMLSPRRLGHIVAALSAMPHVTTIRVHSR 187 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+ DP+R+ L+ L E K +++A+H NH E SE A A + R+ GI LL QSVL Sbjct: 188 VPVADPERVTDALLDAL-ETDKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+ND + L +L R VE R++PYYLH D A GT+HF + +EEGQ+++A L+ +++G Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306 Query: 304 LCQPFYILDLPGGYGKVKI 322 L P Y+LD+PGGYGKV + Sbjct: 307 LAWPLYVLDIPGGYGKVPL 325 >gi|294675951|ref|YP_003576566.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003] gi|294474771|gb|ADE84159.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003] Length = 350 Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 158/341 (46%), Positives = 208/341 (60%), Gaps = 5/341 (1%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 LT +DL L+ Q+ ++ +++ + I +TP + I P DP+A QF+P EL Sbjct: 9 LTRPEDLLAEGLVTPGQMPDLTQVAQDFRIRVTPAMRAAIT--APADPVAAQFVPSAAEL 66 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 PEER DPIGD HSP G+ HRYPDR +L + C VYCRFCFRRE VG L Sbjct: 67 ITRPEERADPIGDAVHSPAPGLTHRYPDRAILHITKTCDVYCRFCFRRETVGETGP--LP 124 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 D AL YI + E+I TGGDPL LS +RL+ VL L I H+ LRFHSRVP+V Sbjct: 125 EPDLAQALEYIAATPALREIILTGGDPLTLSPRRLEDVLTRLSAIPHITTLRFHSRVPVV 184 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P+RI P L+ L+ V++ +H NH E + A AA++RL +AG+ LLSQSVLLKG+ Sbjct: 185 APERITPALVALLRAQRPAVWVVVHTNHAQELTAPARAALARLVDAGVPLLSQSVLLKGV 244 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND + L +L R + R+KPYYLHH DLA GT HFR TI G+ ++A L+ +SG P Sbjct: 245 NDSHDALRDLFRALQDCRVKPYYLHHCDLAPGTGHFRTTIAAGRALMAGLRGPLSGAAIP 304 Query: 308 FYILDLPGGYGKVKIDTHNIKKVGN-GSYCITDHHNIVHDY 347 Y+LD+PGG+GKV I ++ G + +TD VHDY Sbjct: 305 TYVLDIPGGFGKVPITADHVAPGARPGLWRVTDWRGGVHDY 345 >gi|332560846|ref|ZP_08415164.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N] gi|332274644|gb|EGJ19960.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N] Length = 340 Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust. Identities = 158/343 (46%), Positives = 219/343 (63%), Gaps = 10/343 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64 + L S +DL +A L + + ++E++ + I LTP + +DP +ARQF+P Sbjct: 3 RALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 +EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+ Sbjct: 57 DELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 +L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL Sbjct: 175 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +G+ND E L +L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+ Sbjct: 234 RGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRITGI 293 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LDLPGG+GKV + ++ G G + + D +H Y Sbjct: 294 GLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPY 336 >gi|119384403|ref|YP_915459.1| lysine 2,3-aminomutase YodO family protein [Paracoccus denitrificans PD1222] gi|119374170|gb|ABL69763.1| L-lysine 2,3-aminomutase [Paracoccus denitrificans PD1222] Length = 366 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 161/345 (46%), Positives = 219/345 (63%), Gaps = 4/345 (1%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L + +T+ L A L + + + +++ + I ++P + + P D IA QF+P Sbjct: 21 LSQRPITTVPALVEAGLADPARAEVLDKVAAEFRIRISPAMREAMG--APGDGIAAQFVP 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 EL I PEE DPI D SP G+ HRYPDR++L + C VYCRFCFRRE+VG ++ Sbjct: 79 DARELQIRPEELADPISDAAFSPTPGLTHRYPDRVILHVTRTCEVYCRFCFRREVVG-EE 137 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 GT L D AAL Y+ I EVI TGGDP++LS +R+ ++ L I HV I+RFH+ Sbjct: 138 GT-LPEPDLAAALDYVARTPAIHEVILTGGDPMVLSPRRIAALMARLEAIPHVDIVRFHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 RVP+V P RI+ ++ L V++ IH NH E + A AA++RLA+AGI LLSQ+V Sbjct: 197 RVPVVAPSRIDAAMLAALHPRRLAVWVVIHTNHAQELTAGARAALARLADAGIPLLSQTV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKG+N DPE+LA+L R + R+KPYYLHH DLA GT HFR TI EGQ I+A L+ ++S Sbjct: 257 LLKGVNADPEVLADLFRALIRNRVKPYYLHHCDLARGTGHFRTTIAEGQAIMAGLRGRLS 316 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 G C P Y+LDLPGG+GKV + ++K+ G G Y I D H+Y Sbjct: 317 GTCLPTYVLDLPGGHGKVPLGPDHVKETGPGRYLIRDWRGKDHEY 361 >gi|221369244|ref|YP_002520340.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131] gi|221162296|gb|ACM03267.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131] Length = 345 Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust. Identities = 159/346 (45%), Positives = 220/346 (63%), Gaps = 10/346 (2%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFI 61 L + L S +DL +A L + + ++E++ + I LTP + +DP +ARQF+ Sbjct: 5 LMDRALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFV 58 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P +EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+ Sbjct: 59 PTLDELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSE 118 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 +L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R H Sbjct: 119 G--ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIH 176 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SRVP+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQS Sbjct: 177 SRVPVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQS 235 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+ND E L +L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I Sbjct: 236 VLLRGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRI 295 Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +G+ P Y+LDLPGG+GKV + ++ G G + + D +H Y Sbjct: 296 TGIGLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPY 341 >gi|310816895|ref|YP_003964859.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium vulgare Y25] gi|308755630|gb|ADO43559.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium vulgare Y25] Length = 343 Score = 308 bits (788), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 152/340 (44%), Positives = 205/340 (60%), Gaps = 14/340 (4%) Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77 LI ++ ++ + + +TP + I +D + QF+P + ELN+LP E DP Sbjct: 4 GLISPADAAALRPVTETFRMRITPQMRTAIT--RADDGVGLQFVPDRRELNVLPSELTDP 61 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 IGD HSP KGI HRYPDR++ + VC VYCRFCFRRE+VG VL + D AAL Y Sbjct: 62 IGDGAHSPTKGITHRYPDRVIFHVTQVCEVYCRFCFRREVVGENG--VLPAGDVAAALDY 119 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197 I+ I EVI TGGDPL LS +RL ++ L I HV ++R H+RVP+V P RI PE+I Sbjct: 120 IRRTPAINEVILTGGDPLSLSPRRLHEITTALAAIPHVGLMRIHTRVPVVAPNRITPEMI 179 Query: 198 QCLKEAGKPVYIAIHANHP----------YEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 L G ++ +H NHP EF EA+AA+ L AG+ LLSQSVLL+G+ Sbjct: 180 AALTAPGLQTWLVLHTNHPQEFIPEAGGALEFIPEAVAALDLLRTAGVPLLSQSVLLRGV 239 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND +L +L T + L +KPYYLHH DLA GTSH+R TI G+ ++ +L+ +ISG P Sbjct: 240 NDSVAVLKSLFTTLLRLGVKPYYLHHCDLARGTSHYRTTIAAGRALMRALRGQISGSALP 299 Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 Y+LD+PGG+GKV I +G + +TD + H Y Sbjct: 300 TYVLDIPGGFGKVPITADYFDGGADGRWQVTDPNGGTHIY 339 >gi|296535943|ref|ZP_06898093.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957] gi|296263737|gb|EFH10212.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957] Length = 683 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 151/330 (45%), Positives = 205/330 (62%), Gaps = 1/330 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 +L+ +TL A L A L ++ + Y+IALTP + LI+ +P DPIARQ++ Sbjct: 337 RLKPRTLRDAAALVEAGLAPASAQPALEALQQVYAIALTPAVQALIDRADPADPIARQYV 396 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EL LP ER DP D +P+KG+VHRYPDR LLK L CPVYCRFCFRRE+VG Sbjct: 397 PDPAELVTLPRERSDPTSDAPFTPVKGVVHRYPDRALLKPLLACPVYCRFCFRREVVGP- 455 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 G +LS + EAAL + Q+ E I TGGDPL+LS +RL +L L I H+ I+R H Sbjct: 456 DGGLLSEPELEAALDWFARTPQVREAILTGGDPLMLSPRRLAHILARLSSIPHLDIIRLH 515 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +RVP+ P+R+ L L K +++ +HANH EFS A A++RL AG+ LL QS Sbjct: 516 TRVPVAAPERVTAALADTLAATDKALFLCVHANHAREFSAGARTALTRLRRAGVALLGQS 575 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+ND + LA L R + ++KPYYLH D A GT+ F + IE+G+ I+ +L+ + Sbjct: 576 VLLRGVNDSADALAALFRAMLAAQVKPYYLHQLDRAPGTARFEVPIEQGRAILRALRGTL 635 Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331 +GL P Y+LDLPGG GK + + G Sbjct: 636 TGLAWPAYVLDLPGGAGKAPLGPDFARAEG 665 >gi|126464702|ref|YP_001045815.1| lysine 2,3-aminomutase YodO family protein [Rhodobacter sphaeroides ATCC 17029] gi|126106513|gb|ABN79043.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17029] Length = 345 Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 156/346 (45%), Positives = 219/346 (63%), Gaps = 10/346 (2%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFI 61 L + + S +DL +A L + + ++E++ + I LTP + +DP +ARQF+ Sbjct: 5 LMDRAVESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFV 58 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P +EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VG++ Sbjct: 59 PTLDELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGNE 118 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 +L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R H Sbjct: 119 G--ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIH 176 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SRVP+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQS Sbjct: 177 SRVPVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQS 235 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+ND + L L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I Sbjct: 236 VLLRGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMADLRRRI 295 Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +G+ P Y+LDLPGG+GKV + ++ G G + + D +H Y Sbjct: 296 TGIGLPSYVLDLPGGFGKVPLTHDHLIADGPGRWQVRDPQGGLHPY 341 >gi|77465239|ref|YP_354742.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1] gi|77389657|gb|ABA80841.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1] Length = 340 Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust. Identities = 156/343 (45%), Positives = 218/343 (63%), Gaps = 10/343 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64 + L + +DL +A L + + ++E++ + I LTP + +DP +ARQF+P Sbjct: 3 RALENLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 +EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+ Sbjct: 57 DELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 +L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL Sbjct: 175 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +G+ND + L L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+ Sbjct: 234 RGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRPTIDEGRALMAELRRRITGI 293 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LDLPGG+GKV + ++ G G + + D +H Y Sbjct: 294 GLPSYVLDLPGGFGKVPLTYDHLIADGPGRWQVRDPQGGLHPY 336 >gi|330991009|ref|ZP_08314963.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1] gi|329761830|gb|EGG78320.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1] Length = 359 Score = 306 bits (783), Expect = 4e-81, Method: Compositional matrix adjust. Identities = 148/340 (43%), Positives = 217/340 (63%), Gaps = 4/340 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL S DL A L+ Q+ +++++ HY+ A+ P A+LI P+DPI RQ IP Sbjct: 17 RTLRSVTDLLAAGLVTPAQVPALEDVARHYATAIPPAFADLIE--TPDDPIGRQVIPDGA 74 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E++ E DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G+V Sbjct: 75 EIHTDTTEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGP-GGSV 133 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L E AL +++ + I EV+ TGGDPL+LS +R++ +++ L + H+ +R HSRVP Sbjct: 134 LDDAALEHALDWLRTHTGIHEVVMTGGDPLMLSARRMRAIMQALEGMDHIHTIRIHSRVP 193 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP R++ E+ L E + +++ +H NH E + +A AAI R+ I +L QSVLL+ Sbjct: 194 VADPGRLDDEMADAL-ETTRSMWLVVHVNHARELTPQARAAIRRVQARAIPVLGQSVLLR 252 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND P+ L L+R V RI+PYYLH D A GT+ F + I EGQ+++ASL+ +++G+ Sbjct: 253 GVNDTPQALEALLRAQVAARIRPYYLHQLDPAPGTARFHVPIREGQRLLASLRGRVTGIA 312 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345 P Y+LD+PGG+GKV I + + +G+ T +H Sbjct: 313 WPTYVLDIPGGHGKVPIAPGYLHEGPDGTLHATAPDGTIH 352 >gi|149196362|ref|ZP_01873417.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155] gi|149140623|gb|EDM29021.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155] Length = 341 Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust. Identities = 156/341 (45%), Positives = 222/341 (65%), Gaps = 8/341 (2%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHNPNDPIARQFIPQKEE 66 + + + L LI + D + ++ + I+L+P VI N+ P I +Q++P KEE Sbjct: 4 IRNTKALQEQGLISADDTDLLNRVAEKFQISLSPEVIKNIAEPE-----IRQQYLPTKEE 58 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L I EE DPIGD +P+KGI HRYPDR+LLK LH C VYCRFCFRRE VG Q +L Sbjct: 59 LEIQEEELNDPIGDEKFTPVKGITHRYPDRVLLKPLHTCNVYCRFCFRREKVG-QADEIL 117 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + E AL YI+E+ ++WEVI TGGDPL LS +L +L L I HV+++R H+R+P+ Sbjct: 118 KQDELENALNYIRERQEVWEVILTGGDPLSLSADKLASILDQLEAIDHVKVIRIHTRIPL 177 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P++I+ EL++ L + K +Y+ +H N E S+ I +L+ AGI LLSQSVLLK Sbjct: 178 VAPEKISDELLKVL-DREKALYMILHCNSHKELSDNVCFGIKKLSRAGIPLLSQSVLLKN 236 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND E L L R+ V +R++PYYLHHPDLA GTSHFR+++E+G+++ + L++ +SG+ Q Sbjct: 237 INDSVEKLEKLFRSLVAIRVRPYYLHHPDLAQGTSHFRVSLEKGRQVTSELRKSLSGIAQ 296 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LD+PGG GKV I+ + ++ I H+ DY Sbjct: 297 PLYVLDVPGGLGKVPAGKEFIQAKDDKTWKIQTIHDTFVDY 337 >gi|296114565|ref|ZP_06833218.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter hansenii ATCC 23769] gi|295978921|gb|EFG85646.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter hansenii ATCC 23769] Length = 351 Score = 300 bits (768), Expect = 2e-79, Method: Compositional matrix adjust. Identities = 145/340 (42%), Positives = 213/340 (62%), Gaps = 4/340 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL + +DL A L+ + ++ +++ Y+ A+ P A LI +P+DPI Q IP Sbjct: 11 RTLRTVRDLVEAGLVSQAAQPALEAVAHDYATAIPPAFAALIE--HPDDPIGLQVIPDPA 68 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL+ EER DPIGD+ SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G V Sbjct: 69 ELHTTTEERSDPIGDDALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG-V 127 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L E AL +++ I EVI +GGDP++LS +R+ +++ L + HV +R H+RVP Sbjct: 128 LDDAALERALDWLRAHPAIGEVILSGGDPMMLSPRRMGHIIRALEAMPHVHTIRIHTRVP 187 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP+R+ +++ L +++ IHANH E + +A AI R+ I +++QSVLL+ Sbjct: 188 VADPERVTADMMAALDTTCS-LWMVIHANHARELTPQARKAIRRMQAQAIPVIAQSVLLR 246 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND P+ L +L+R V R+KPYYLH D A GTS FR+ I EGQ+++A+L+ +++GL Sbjct: 247 GVNDTPQALEDLLRALVAARVKPYYLHQLDPAPGTSRFRVPIAEGQRLLAALRGRVTGLA 306 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345 P Y+LD+PGG+GKV I + V + D H Sbjct: 307 WPTYVLDIPGGHGKVPIGPGYLDTVEGMGMQVRDPQGRPH 346 >gi|58038709|ref|YP_190673.1| lysine 2,3-aminomutase [Gluconobacter oxydans 621H] gi|58001123|gb|AAW60017.1| Lysine 2,3-aminomutase [Gluconobacter oxydans 621H] Length = 356 Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust. Identities = 148/336 (44%), Positives = 213/336 (63%), Gaps = 5/336 (1%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 RH TL + DL +A L + ++ + +++A+ P +LI +P+DPIARQ IP Sbjct: 19 RH-TLRTPSDLIDAGLATEADRATLEAVGERFTMAIPPAFRDLIT--HPDDPIARQVIPD 75 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 EL LP E DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G Sbjct: 76 ARELVTLPHEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGPGGG 135 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 +LS+ E AL ++++ I E+I TGGDPL+L+ +RL+ ++++L I H++ +R HSR Sbjct: 136 -LLSNAQLETALDWVRQHPDIREIILTGGDPLMLAPRRLKHIVQSLSGIPHIETIRIHSR 194 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+ DP R+ EL+ + E + +++ IHANH E + A AI + + I +LSQSVL Sbjct: 195 VPVADPARMTEELLDAM-ETDRAMWLVIHANHASELTPHATKAIRAVLSRAIPVLSQSVL 253 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+ND E L L+R ++ R+KPYYLHH D AAGT HF + + +GQ ++ L+ +++G Sbjct: 254 LRGVNDTVESLEALLRALIKARVKPYYLHHLDAAAGTGHFHVPVAQGQALLRQLRGRVTG 313 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339 L P Y+LD+P G GKV I + G+ D Sbjct: 314 LAWPTYVLDIPSGRGKVPIGPEYLDPASPGTVSTPD 349 >gi|162146333|ref|YP_001600792.1| L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus PAl 5] gi|209543664|ref|YP_002275893.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161784908|emb|CAP54451.1| putative L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus PAl 5] gi|209531341|gb|ACI51278.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 382 Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust. Identities = 147/326 (45%), Positives = 200/326 (61%), Gaps = 4/326 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +T+ L A L+ + ++E++ Y+ A+ P A LI P+DPI Q +P Sbjct: 26 RTVRDVAGLVAAGLVSPGAVPALEEVARQYATAIPPAFAGLIT--RPDDPIGLQVVPDAS 83 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL I P ER DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G V Sbjct: 84 ELTIAPHERMDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGPDGG-V 142 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L E AL +++ I EVI TGGDPL+LS +RL +++ L + HV +R HSRVP Sbjct: 143 LDDAALERALDWLRTHPAIREVILTGGDPLMLSPRRLGAIVRALGDMPHVTTIRIHSRVP 202 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP RI L + E + +++ +HANH EF+ A AA+ R+ I +L QSVLL+ Sbjct: 203 VADPGRITDALADAM-ETDRAMWVVVHANHAREFTPAARAALRRIQARAIPVLGQSVLLR 261 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND L L R VE R+KPYYLH D A GT+ F + I EG++++A L+ +++GL Sbjct: 262 GVNDSVAALEALFRAMVEARMKPYYLHQLDAAPGTARFHVPIAEGRRLLAGLRGRVTGLA 321 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVG 331 P Y LD+PGGYGKV + ++ G Sbjct: 322 WPTYTLDIPGGYGKVPLGPDYLEPEG 347 >gi|146279243|ref|YP_001169401.1| hypothetical protein Rsph17025_3212 [Rhodobacter sphaeroides ATCC 17025] gi|145557484|gb|ABP72096.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17025] Length = 340 Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust. Identities = 150/342 (43%), Positives = 215/342 (62%), Gaps = 8/342 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + L S DL L+ + + + E++ + I +T + + + +ARQF+P + Sbjct: 3 RALDSLDDLATLGLVDPAE-ERLAEVARAFRIRVT----SQMAAAAADPAVARQFVPTVD 57 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL I PEE DPIGD SP+ G+ HRY DR++L + C VYCRFCFRRE+VGS+ + Sbjct: 58 ELEIRPEELADPIGDEARSPVPGLTHRYTDRVILHVTRTCDVYCRFCFRREVVGSEG--L 115 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS D AAL YI+ + EVI TGGDPL LS +RL+ +++ L I H+ +R HSRVP Sbjct: 116 LSDADLTAALDYIEATPAVREVILTGGDPLTLSPRRLRGIIERLGQIAHLDQVRIHSRVP 175 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V PQR++ ++I+ L PV+I +H NH E +A AA+ RLA+ G+ LLSQSVLL+ Sbjct: 176 VVAPQRVDEDMIRALL-GPVPVWIVVHVNHAAELRLDARAALGRLADRGVPLLSQSVLLR 234 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND + L L R + LR+KPYYLHH DLA G HFR +I +G+ I+A L+ +I+G+ Sbjct: 235 GVNDSADTLEALFRALLRLRVKPYYLHHCDLARGAGHFRTSIAQGRAIMAELRRRITGIG 294 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LD+PGG+GKV + ++ G G + + D VH Y Sbjct: 295 LPTYVLDIPGGFGKVPVTPDHVIPDGPGRWQVRDPQGGVHRY 336 >gi|326404849|ref|YP_004284931.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301] gi|325051711|dbj|BAJ82049.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301] Length = 325 Score = 290 bits (743), Expect = 2e-76, Method: Compositional matrix adjust. Identities = 149/310 (48%), Positives = 190/310 (61%), Gaps = 4/310 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +A L A L ++ ++ Y+ A+ +A LI +P DPI QFIP E Sbjct: 5 TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALIG--DPADPIGLQFIPDPAE 62 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L P ER DPIGD+ SP+ GIVHRYPDR LLK CPVYCRFCFRRE VG + G VL Sbjct: 63 LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + EAA ++ + + EVI TGGDPLILS +RL + LR I H+ LR H+RVP+ Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP RI P L+ L + P+++ +HANH EF EA A + L AGI LL QSVLL+G Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + L L T +E +KPYYLH D A GT+ F + I EG+ ++A+L+ ISG Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPITEGRALIAALRGTISGHAL 300 Query: 307 PFYILDLPGG 316 P YILD P G Sbjct: 301 PTYILDSPAG 310 >gi|148261362|ref|YP_001235489.1| lysine 2,3-aminomutase YodO family protein [Acidiphilium cryptum JF-5] gi|146403043|gb|ABQ31570.1| L-lysine 2,3-aminomutase [Acidiphilium cryptum JF-5] Length = 325 Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust. Identities = 149/310 (48%), Positives = 190/310 (61%), Gaps = 4/310 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +A L A L ++ ++ Y+ A+ +A LI +P DPI QFIP E Sbjct: 5 TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALIG--DPADPIGLQFIPDPAE 62 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L P ER DPIGD+ SP+ GIVHRYPDR LLK CPVYCRFCFRRE VG + G VL Sbjct: 63 LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + EAA ++ + + EVI TGGDPLILS +RL + LR I H+ LR H+RVP+ Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP RI P L+ L + P+++ +HANH EF EA A + L AGI LL QSVLL+G Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + L L T +E +KPYYLH D A GT+ F + I EG+ ++A+L+ ISG Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPIVEGRALIAALRGTISGHAL 300 Query: 307 PFYILDLPGG 316 P YILD P G Sbjct: 301 PTYILDSPAG 310 >gi|114327751|ref|YP_744908.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1] gi|114315925|gb|ABI61985.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1] Length = 362 Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 148/327 (45%), Positives = 205/327 (62%), Gaps = 6/327 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 ++L S DL A LI E ++ ++ Y+IA+ P + LI + +DPI Q IP Sbjct: 25 RSLRSLADLRRAGLIDDEA--PLQAVAAQYAIAIPPAMQALIT--DRHDPIGLQVIPDPA 80 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E+ P E DPIGD+ SP+ GIVHRYPDR LLK L +CPVYCRFCFRRE VG G V Sbjct: 81 EMITAPYENVDPIGDDALSPVPGIVHRYPDRALLKPLLICPVYCRFCFRREHVGPDGG-V 139 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS + AL ++ QI EVI TGGDPL+LS +RL ++ L I H+ I+R HSRVP Sbjct: 140 LSEEQLRIALDWLAGHPQIREVILTGGDPLMLSPRRLSFIINELNNIPHIDIIRIHSRVP 199 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP + ++ L E K +++ +H N+ E ++ A +I GI +LSQ+VLL+ Sbjct: 200 VADPALVTQAMLDAL-ETDKAMFLVLHTNNVKELTDLAALSIQSFQRRGIPVLSQTVLLR 258 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND E L L R + LR+KPYYLH D A GT+ FR+ +EEG+ I+ +L+ +ISGL Sbjct: 259 GVNDSAEALEALYRRILRLRVKPYYLHQLDAAPGTARFRVPVEEGRAILHALRGRISGLA 318 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGN 332 P Y++D+PGGYGKV +D ++ G+ Sbjct: 319 WPTYVIDIPGGYGKVPVDPDYLESDGS 345 >gi|258545639|ref|ZP_05705873.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826] gi|258519106|gb|EEV87965.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826] Length = 326 Score = 282 bits (721), Expect = 6e-74, Method: Compositional matrix adjust. Identities = 130/271 (47%), Positives = 185/271 (68%), Gaps = 1/271 (0%) Query: 52 PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111 P+DPIA QFIP EL I E DPIGD HSPL +VHRYP+R+L K+ +C VYCRF Sbjct: 40 PDDPIAAQFIPDARELTIAASELADPIGDAPHSPLPSLVHRYPNRVLWKISPICAVYCRF 99 Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 CFR+E +G ++G L + A AY+ QI E+I +GGDPL LS+K+L++ L +R Sbjct: 100 CFRKEHIG-RRGQALRQSEIAAVSAYLAANPQIEEIILSGGDPLTLSNKKLRQNLAIIRD 158 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231 + H++ LR HSR+P+V P RI+ L+ L E + ++ +H NH E + A AA+ RL Sbjct: 159 LPHIRRLRIHSRIPVVQPARIDHALLDLLGEQPQSTHLVVHTNHSAELTPNARAALHRLR 218 Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291 +G++L SQ+VLLKG+N D LANLM ++ +KPYYLHH DLA GT H+R+++ EG+ Sbjct: 219 TSGVMLYSQTVLLKGVNADAATLANLMNDLLDCGVKPYYLHHLDLARGTGHYRVSLNEGR 278 Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 IVA+L+ ++SG+ P YI+++PGG GK+ + Sbjct: 279 AIVAALRRRLSGIAMPTYIVEIPGGDGKIPV 309 >gi|146328795|ref|YP_001209500.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A] gi|146232265|gb|ABQ13243.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A] Length = 304 Score = 272 bits (695), Expect = 6e-71, Method: Compositional matrix adjust. Identities = 132/294 (44%), Positives = 199/294 (67%), Gaps = 5/294 (1%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 ++ Y + ++ + +LIN + IARQF+P ++EL + PEE DPIGD HSP+ +V Sbjct: 1 MTRDYPVRISKTMNDLINH---SAAIARQFLPSEDELTVAPEELRDPIGDEAHSPVDFLV 57 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 HRY +R+L K+ VC V+CRFCFRRE++G QKG+ + A Y+++ +I EVI + Sbjct: 58 HRYRNRVLWKVTQVCAVHCRFCFRRELIG-QKGSRPDEAAIQQAHDYMRQHHEIEEVILS 116 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDP+ LS +RL+ + L I+H++ +R H+R+PIV P++I E + L++ GK + Sbjct: 117 GGDPMTLSAERLRLYVAPLLEIEHIRRIRVHTRMPIVAPEQIKEEWLTTLQKTGKQIVYV 176 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H NH EF+ + + ++RLA + LLSQ+VLL+G+NDD +LA LM F+ RIKPYY Sbjct: 177 LHVNHADEFNPASDSLLARLATDHL-LLSQTVLLRGVNDDAAVLAQLMEAFLARRIKPYY 235 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 LHH DLA GT HFR+TI+EG+ I L++ +SG+ P YI+++PGG GK+ + T Sbjct: 236 LHHLDLARGTGHFRVTIDEGRAIYQQLRQYVSGIALPTYIVEIPGGDGKIAVMT 289 >gi|149922522|ref|ZP_01910953.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1] gi|149816630|gb|EDM76124.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1] Length = 316 Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust. Identities = 137/303 (45%), Positives = 188/303 (62%), Gaps = 3/303 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I+ +P+DPI RQ +P EL LP ER DPIGD HSP+ + HRYP R LL +VC Sbjct: 9 IDWQDPDDPIRRQAVPSPLELESLPGERPDPIGDAAHSPVPRLTHRYPTRALLYPTYVCS 68 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 +YCR CFR+E + + S E ALAY+ E +++ EVI TGGDPL LS +L+ + Sbjct: 69 MYCRHCFRKESINDEAAG-FSMAALEPALAYLAEHTELREVILTGGDPLTLSDVQLEALR 127 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIA 225 L I+H+ +LR H+RVP+ P R+ P L+ L+ G + V + H NHP E ++A+ Sbjct: 128 SRLDAIEHLSLLRVHTRVPVTLPTRVTPGLVAALRGDGSRMVCVVTHFNHPRELDDDALT 187 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFR 284 A RL AG +LL+QSVLL+G+ND+ E+LA L V KPYYLHH DL G SHFR Sbjct: 188 ACRRLREAGFMLLNQSVLLRGVNDEVEVLAELFEKLVYRAGAKPYYLHHCDLTRGVSHFR 247 Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 +I+ G++++A+L+ +ISGLC P Y+LDLPGG GKV I + +C + + Sbjct: 248 TSIDRGRELMAALRGRISGLCLPEYVLDLPGGDGKVPIGPSFVHARDGQRWCFSTWAGGL 307 Query: 345 HDY 347 H Y Sbjct: 308 HHY 310 >gi|160879786|ref|YP_001558754.1| lysine 2,3-aminomutase YodO family protein [Clostridium phytofermentans ISDg] gi|160428452|gb|ABX42015.1| lysine 2,3-aminomutase YodO family protein [Clostridium phytofermentans ISDg] Length = 393 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 137/347 (39%), Positives = 221/347 (63%), Gaps = 3/347 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q R++ T A+ + +L ++E+ EI + + +A+TP A+L++P + N PI Q + Sbjct: 22 QFRNRITTVAELTESIDLTEQEK-QEITQCLGKFRMAITPYYASLMDPTDRNCPIRMQAV 80 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E ILP E DP+ + SP+ GIVHRYPDR+L + H C +YCR C RR +VG + Sbjct: 81 PSNLENRILPCEMADPLNEEGESPVPGIVHRYPDRVLFLVTHQCSMYCRHCTRRRLVG-E 139 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + V+S K+ + A+ YI+ K +I +V+ +GGDPL +S ++L+ +LK LR I+HV+I+R Sbjct: 140 EDMVISDKEIDTAVEYIRSKEEIRDVLISGGDPLTMSDEKLEHILKKLRSIEHVEIIRIG 199 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +RVP+V P RI EL L+ +P++I H NHP E +++++ A +RL +AGI L +QS Sbjct: 200 TRVPVVLPMRITLELTNMLRNY-EPIWINTHFNHPKEITKDSMDACARLVDAGIPLGNQS 258 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+GIND +I+ +L+ V+ RI+PYYL+ DL+ G HFR +E G +++ L+ I Sbjct: 259 VLLRGINDSTDIMKDLLLKLVKNRIRPYYLYQCDLSQGLGHFRTRVETGIEMIHHLQGYI 318 Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P +++D PGG GK+ ++ I + + + ++ ++ YP Sbjct: 319 SGYAIPKFVIDAPGGGGKIPVNPEYIISIDDNEVVMRNYKGDLYTYP 365 >gi|322419288|ref|YP_004198511.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18] gi|320125675|gb|ADW13235.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18] Length = 343 Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust. Identities = 138/329 (41%), Positives = 208/329 (63%), Gaps = 12/329 (3%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + +TS ++L + L + + D + + Y + +TP LI P DPI RQ +P E Sbjct: 10 RCITSPEEL--SGLFRSQGAD-LTCVVRRYPMRITPYYLGLIR--EPGDPIWRQCVPDPE 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 ELN + + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG Q Sbjct: 65 ELNDVTQS-PDPLDEERLSPVPGLIHRYPDRVVFLVSTACAVYCRFCMRKRGVGCQG--- 120 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 +S + ++AYI K QI +VI +GGDPL+LS RL +L LR I HV+I+R +RVP Sbjct: 121 MSPAPVDQSVAYIASKPQIRDVILSGGDPLLLSDDRLDGILTALRRIPHVEIIRIGTRVP 180 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + P+RI +L + LK +P+Y+ H NHP E +E++ A +RLA+AGI L +QSVLLK Sbjct: 181 VTLPERITVKLARLLKRH-QPLYLNTHFNHPREITEQSARACARLADAGIQLGNQSVLLK 239 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP+++ LM+ + +R++PYY+H DL GT+HFR + +G ++A+L+ SGL Sbjct: 240 GVNDDPQVMRELMQRLLAIRVRPYYIHQMDLVQGTAHFRTRVADGVAVMAALRGHTSGLA 299 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGS 334 P Y++DLPGG GKV++ + G+GS Sbjct: 300 VPHYVIDLPGGKGKVEVTSARFS--GDGS 326 >gi|225163783|ref|ZP_03726082.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2] gi|224801613|gb|EEG19910.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2] Length = 391 Score = 268 bits (686), Expect = 7e-70, Method: Compositional matrix adjust. Identities = 134/352 (38%), Positives = 214/352 (60%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLR++ LT +DL + ++ + N S+A+TP NLI+ NP DP+ Q Sbjct: 30 WQLRNR-LTRLEDLERYMTLTPDERAGVLFAGNKLSLAITPYFFNLIDRDNPADPLRLQV 88 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+ E + EE D +G++ HSP+ G+VHRYPDR+L + C YCR+C R +V + Sbjct: 89 IPRAGESQLHAEEMLDSLGEDEHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + E L YI+ S++ +V+ +GGDPL+LS ++L +L LR I HV+ +R Sbjct: 149 AQDYNFHP-EYEQGLRYIESHSEVRDVLLSGGDPLLLSDRKLDHLLGRLRAIPHVEFIRI 207 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P+ PQRI PEL + K+ G P++++IH NHP+E +EE AA RL+ AG+ L +Q Sbjct: 208 GSRIPVFMPQRITPELCEVFKKHG-PIWMSIHVNHPHECTEELRAACERLSYAGVPLGNQ 266 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+NDDP+ + L+ + +R++PYYL+ DL G SHF++ + G +I+ +L+ Sbjct: 267 SVLLRGVNDDPDTMRALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRRGLEIIKNLRGH 326 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +G P Y++D PGG GKV ++ ++K+ + ++ + YP S+ Sbjct: 327 TTGYAIPQYVIDAPGGGGKVPMNPDYVEKITDDEVIFRNYEGHTYRYPLTST 378 >gi|218508047|ref|ZP_03505925.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Brasil 5] Length = 198 Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 117/198 (59%), Positives = 157/198 (79%) Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+LS +RL+++++ L I HV+I+RFH+RVP+VDP++I+ LI LK +GK VY+A+HA Sbjct: 1 PLVLSPRRLREIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHA 60 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHH Sbjct: 61 NHPRELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHH 120 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 PDLA GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK I I+ G+G Sbjct: 121 PDLAPGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVISESVIRATGDG 180 Query: 334 SYCITDHHNIVHDYPPKS 351 Y ++D+ H YPP Sbjct: 181 CYSVSDYRGGEHSYPPAG 198 >gi|239617353|ref|YP_002940675.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF 19.5.1] gi|239506184|gb|ACR79671.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF 19.5.1] Length = 426 Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust. Identities = 132/347 (38%), Positives = 211/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ +T+ + L I KE+ + IK +A+TP A L++P NP PI RQ Sbjct: 23 WQVRNR-ITTVEQLKQVINITKEEEEGIKNCLKTLRMAITPYYATLMDPDNPKCPIRRQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P ++EL + + DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G Sbjct: 82 VPTEKELIVDRWDMLDPLHEDEDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + ++ + A+ YI+E Q+ +V+ +GGD L++ L+ +LK LR I HV+I+R Sbjct: 141 QLDKPRTKREIDKAIEYIRETPQVRDVLLSGGDALLVDDSVLEYILKELRKIPHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL++ LK+ P+++ H NHP E + E+ A LANAGI L +Q Sbjct: 201 GSRTPVVLPQRITPELVKMLKKY-HPIWLNTHFNHPKEITPESAKACETLANAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND P I+ L+ V++R++PYY++ DL+ G HFR +I +G I+ SL Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIAIMESLIGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK+++ + + + + ++ ++ Y Sbjct: 320 TSGFCVPTFVVDAPGGGGKIRVMPQYVVSQSDRTVVLRNYEGVITTY 366 >gi|313886286|ref|ZP_07820012.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I] gi|332299776|ref|YP_004441697.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707] gi|312924231|gb|EFR35014.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I] gi|332176839|gb|AEE12529.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707] Length = 421 Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 123/300 (41%), Positives = 197/300 (65%), Gaps = 2/300 (0%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 E+ + ++E +A+TP +LI+P++PNDP+ +Q IP EL++ PE++ DP+ ++ Sbjct: 44 EEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQSIPTINELHVSPEDQLDPLSEDE 103 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 SP+ G+ HRYPDR+L + +C +YCR C RR G QK + E + YI++ Sbjct: 104 DSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-QKDAASPKERIEKCIEYIEQTP 162 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 ++ +V+ +GGD L++S K L+ +++ LR I HV+I+R SR P+V PQRI PEL+Q L + Sbjct: 163 EVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRIGSRTPVVCPQRITPELVQMLSK 222 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 P+++ H NHP E + E+ A R+ANAGI L +QSVLL+GIND P I+ +L+ V Sbjct: 223 Y-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQSVLLRGINDCPSIMMHLVHELV 281 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 ++R++PYY++ DL+ G SHFR + +G +I+ +L+ SG P +++D PGG GK+ + Sbjct: 282 KMRVRPYYIYVCDLSQGISHFRTPVSKGIEIIEALRGHTSGYAVPTFVVDAPGGGGKIPV 341 >gi|294055535|ref|YP_003549193.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita akajimensis DSM 45221] gi|293614868|gb|ADE55023.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita akajimensis DSM 45221] Length = 397 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 126/317 (39%), Positives = 197/317 (62%), Gaps = 2/317 (0%) Query: 36 SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95 ++A+TP NLINP +PNDPI RQ IP+ E I P+E DP+G+ P+ GIVHRYPD Sbjct: 64 ALAITPYFFNLINPKDPNDPIRRQVIPRAAESQIAPDEMLDPVGEEGTKPVDGIVHRYPD 123 Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R+L + C YCR+C R +V + + + E+ L YI++ S+I +V+ +GGDPL Sbjct: 124 RVLFLVTDRCAAYCRYCTRSRLVSNAQDYNFHP-EFESGLEYIRQHSEIRDVLLSGGDPL 182 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 +LS K+L +L LR I HV+ +R SR+P+ PQRI P+L ++ G P++++IH NH Sbjct: 183 LLSDKKLDYLLGELRKIPHVEFIRIGSRIPVFLPQRITPQLCDIFRKHG-PIWLSIHVNH 241 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275 P E S E AA RL+ AG+ + +QSVLLKG+N+D ++ +L+ + +R++PYYL+ D Sbjct: 242 PSECSLELKAACERLSYAGVPIGNQSVLLKGVNNDAGVMKSLIHRLLMMRVRPYYLYQCD 301 Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335 L G++H R EG +I+ L+ SG P +++D PGG GK+ ++ ++ + + Sbjct: 302 LITGSAHLRTDPREGIEIIRQLRGHTSGYSIPQFVIDAPGGGGKIPLNPDYVEDISETTL 361 Query: 336 CITDHHNIVHDYPPKSS 352 + + ++YP K Sbjct: 362 ILRNFQGERYEYPLKCG 378 >gi|182413733|ref|YP_001818799.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1] gi|177840947|gb|ACB75199.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1] Length = 403 Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 132/352 (37%), Positives = 214/352 (60%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ LTS +L + E+ ++ S+A+TP NLI+ +PN PI +Q Sbjct: 30 WQLKNR-LTSVAELERYMTLTPEEKAGCLFANHKLSLAITPYFFNLIDREDPNCPIRKQV 88 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+ E+ + EE+ D +G++ HSP+ G+VHRYPDR+L + C YCR+C R +V + Sbjct: 89 IPRAGEMQVSAEEQLDSLGEDAHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + E L YI+ ++ +V+ +GGDPL+LS ++L+ ++ LR I HV+ +R Sbjct: 149 AQDYNFHP-EYEQGLRYIEAHPEVRDVLLSGGDPLLLSDRKLEHLISRLRAIPHVEFIRI 207 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P+ PQRI PEL + K+ G P++++IH NHP E + E A RL+ AG+ L +Q Sbjct: 208 GSRIPVFLPQRITPELCEVFKKHG-PIWMSIHVNHPKEATAELKQACDRLSFAGVPLGNQ 266 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKG+NDD E++ L+ + +R++PYYL+ DL G SHF++ + +G +I+ +L+ Sbjct: 267 SVLLKGVNDDAEVMKALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRKGIEIIQALRGH 326 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +G P Y++D PGG GKV I+ ++K+ + + YP KS+ Sbjct: 327 TTGYAIPQYVIDAPGGGGKVPINPDYLEKITDEEVVFRNFEGRRFTYPLKST 378 >gi|77920113|ref|YP_357928.1| hypothetical protein Pcar_2520 [Pelobacter carbinolicus DSM 2380] gi|77546196|gb|ABA89758.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380] Length = 347 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 136/321 (42%), Positives = 196/321 (61%), Gaps = 7/321 (2%) Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILP-EEREDPIGDNNH 83 + E+ + Y + +TP +LI P D I RQ +P + EL LP +E DP+ + Sbjct: 26 MSELDAVVQRYPMRITPYYLDLIE--KPGDAIWRQCVPDRREL--LPCQEDADPLAEERL 81 Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 SP+ +VHRYPDR+LL C VYCRFC R+ VG V S + + A+ Y+ Q Sbjct: 82 SPVPLLVHRYPDRVLLLASGQCAVYCRFCTRKRKVGCAAMGV-SDRHLDEAIDYVARTEQ 140 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 + +VI +GGDPL+L RL+ +L LR I HV+I+R SRVP+ PQRI EL L+ Sbjct: 141 VRDVILSGGDPLLLEDDRLEHLLMRLRAIPHVEIIRIGSRVPVTLPQRITEELCAMLRRY 200 Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 P+Y+ H NHP E + +A A RLA+AG+ L +Q+VLL+G+ND P ++ L++ ++ Sbjct: 201 -HPLYLNTHFNHPRELTPQAFEACRRLADAGLPLGNQTVLLRGVNDTPAVMRQLVKGLLK 259 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +R++PYYLHH DLAAGT HFR IE G IVA+L+ ISGL P Y++D PGG GK+ + Sbjct: 260 MRVRPYYLHHMDLAAGTGHFRTRIETGLDIVAALRGPISGLAVPHYVIDSPGGKGKIPLL 319 Query: 324 THNIKKVGNGSYCITDHHNIV 344 + K+G+ + T ++ Sbjct: 320 PEYLVKLGDTALLRTPSGEMI 340 >gi|228469409|ref|ZP_04054423.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3] gi|228309093|gb|EEK17723.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3] Length = 421 Score = 259 bits (663), Expect = 3e-67, Method: Compositional matrix adjust. Identities = 123/300 (41%), Positives = 196/300 (65%), Gaps = 2/300 (0%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 E+ + ++E +A+TP +LI+P++PNDP+ +Q IP EL++ PE++ DP+ ++ Sbjct: 44 EEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQSIPTINELHVSPEDQLDPLSEDE 103 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 SP+ G+ HRYPDR+L + +C +YCR C RR G QK + E + YI++ Sbjct: 104 DSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-QKDAASPKERIEKCIEYIEQTP 162 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 ++ +V+ +GGD L++S K L+ +++ LR I HV+I+R SR P+V PQRI PEL+Q L + Sbjct: 163 EVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRIGSRTPVVCPQRITPELVQMLSK 222 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 P+++ H NHP E + E+ A R+ANAGI L +QSVLL+GIND P I+ +L+ V Sbjct: 223 Y-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQSVLLRGINDCPSIMKHLVHELV 281 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 ++R++PYY++ DL+ G SHFR + +G +I+ +L+ SG P +++D PGG GK + Sbjct: 282 KMRVRPYYIYVCDLSRGISHFRTPVSKGIEIIEALRGHTSGYAVPTFVVDAPGGGGKTPV 341 >gi|189218034|ref|YP_001938676.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4] gi|189184892|gb|ACD82077.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4] Length = 397 Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 138/351 (39%), Positives = 207/351 (58%), Gaps = 8/351 (2%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + Q LI E+ + + +LTP NLI+P NP+ P+ RQ Sbjct: 29 WQLKNRLNSLEQIEQRLFLIPDERRGLMFAAKEKLAFSLTPYFFNLIDPFNPDCPLRRQV 88 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-- 118 IP+ EEL +P E DP G++ G+VHRYPDR+L + C YCR+C R +V Sbjct: 89 IPRAEELVSMPYEMMDPCGEDKDMVAPGLVHRYPDRVLFLVTDRCATYCRYCTRSRIVSG 148 Query: 119 -GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 GSQK + D + Y+++ ++I +V+ +GGDPL+LS RL+K+L+ LR I H++I Sbjct: 149 VGSQKLEI----DDKLTFDYLKKHTEIRDVLISGGDPLLLSDGRLEKILRQLREIAHIEI 204 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +RVPI PQRI L + LK A P++I IH+NHP E + EA A+ +LA+ GI L Sbjct: 205 IRIGTRVPIFLPQRITESLCKVLK-AYHPLWINIHSNHPKELTLEAKTALEKLADTGIPL 263 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLLKGINDDP+ + L+ V R++PYYL+ DL GT HFR+ I G +I+ L Sbjct: 264 GNQSVLLKGINDDPQTMLELVNKLVRCRVRPYYLYQCDLIQGTHHFRVPIRRGLEIMQKL 323 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 + +G P Y++D PGG GK+ ++ + + ++ ++ YP Sbjct: 324 RGFTTGFAVPQYVVDGPGGGGKIPLNPDYVMGYYEDKVLLRNYEGKIYSYP 374 >gi|218516316|ref|ZP_03513156.1| L-lysine 2,3-aminomutase protein [Rhizobium etli 8C-3] Length = 195 Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust. Identities = 115/195 (58%), Positives = 153/195 (78%) Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 LS +RL+ +++ L I HV+I+RFH+RVP+VDP++I+ LI LK +GK VY+A+HANHP Sbjct: 1 LSPRRLRDIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHANHP 60 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHHPDL Sbjct: 61 RELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHHPDL 120 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336 A GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK I I+ G+G Y Sbjct: 121 APGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVIGESVIRATGDGCYS 180 Query: 337 ITDHHNIVHDYPPKS 351 ++D+ H YPP Sbjct: 181 VSDYRGGEHSYPPAG 195 >gi|157363352|ref|YP_001470119.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae TMO] gi|157313956|gb|ABV33055.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae TMO] Length = 419 Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 134/347 (38%), Positives = 213/347 (61%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLR++ + NL +E+ + ++ +A+TP A L++P NP PI Q Sbjct: 23 WQLRNRIMNLDVLQEVVNLTDQER-EGVRHSLKFLRMAITPYYATLMDPENPRCPIRMQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +ELNI EE DP+ ++ SP+KG+ HRYPDR+LL + C +YCR C RR G Sbjct: 82 IPTAKELNISQEEMIDPLHEDVDSPVKGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + LS + +A+ YI++ +I +V+ +GGDPL LS ++L+ ++ +R I+HV+I+R Sbjct: 141 ETDSPLSDELLNSAIDYIKQNKRIRDVLLSGGDPLTLSTEKLENIISRIREIEHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+V P RI EL LK+ P+++ H NHP E + ++ A+S LA+AGI L +Q Sbjct: 201 GTRVPVVLPMRITEELTSMLKKY-HPIWLNTHFNHPKEITPQSRRALSMLADAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND P+I+ L+ V+ R++PYY++ DL+ G SHFR T+ +G +I+ L+ Sbjct: 260 SVLLRGINDCPQIMKKLVHELVKNRVRPYYIYQCDLSRGLSHFRTTVAKGIEIIEYLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ ++ + +G G + ++ + Y Sbjct: 320 TSGFAVPTYVIDAPGGGGKIPVEPQYLISMGEGKVVLRNYEGGIFVY 366 >gi|171912149|ref|ZP_02927619.1| Lysine 2,3-aminomutase [Verrucomicrobium spinosum DSM 4136] Length = 406 Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust. Identities = 128/317 (40%), Positives = 196/317 (61%), Gaps = 2/317 (0%) Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91 N ++A+TP NLI+P +P+ PI RQ IP+ EE P+E DP G+++H P+ G+VH Sbjct: 64 GNKLAMAITPHFFNLIHPTDPDCPIRRQVIPRIEETWDDPDEMSDPCGEDSHMPVPGLVH 123 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 RYPDR+L + C YCR+C R +V L + + EA Y++ +++ +V+ +G Sbjct: 124 RYPDRVLFLVTDRCASYCRYCTRSRVVSGVGDQELHT-EFEAVFKYLEAHTEVRDVLLSG 182 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 GD L+ S +L+ +LK LR I H++ LR SRVPI PQRI PEL L + P+++++ Sbjct: 183 GDALLFSDAKLEGILKRLRAIPHIEFLRIGSRVPIFLPQRITPELCTMLAKY-HPLWMSV 241 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271 H NHP E + E A+ RLAN GI L +QSVLL+G+NDDPE++ L+ + R++PYYL Sbjct: 242 HTNHPREITIEVKEALERLANHGIPLGNQSVLLRGVNDDPEVMKALVHKLLMSRVRPYYL 301 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331 + DL G+SH R ++ +G +I+ SL+ +G P +++D PGG GKV ++ + Sbjct: 302 YQCDLIQGSSHLRTSVSKGLEIIESLRGHTTGYGVPQFVIDAPGGGGKVPVNPEYVLAKD 361 Query: 332 NGSYCITDHHNIVHDYP 348 + I ++ V DYP Sbjct: 362 SHHTLIRNYEGKVFDYP 378 >gi|284097493|ref|ZP_06385581.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3] gi|283830995|gb|EFC35017.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3] Length = 340 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 129/299 (43%), Positives = 186/299 (62%), Gaps = 7/299 (2%) Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83 ++E++ I + I + P +LI P DPI +Q +P EL + EDP+ + + Sbjct: 25 DLEEMQRIHKEFPIRINPYYLSLIK--EPGDPIWKQVVPDPREL--MSTGVEDPLHEEDD 80 Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 S + + HRYPDR L + ++CP+YCRFC R+ VG +S + E LAYIQ + Sbjct: 81 SEVPNVTHRYPDRALFYVNYMCPIYCRFCTRKRKVGDPHS--ISEDNIETGLAYIQAHPE 138 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I +VI +GGDPL+L+ K++ ++ LR IKH++I+R SRVP+ PQRI PEL LK Sbjct: 139 IRDVIISGGDPLMLTDKKIDMIVGGLRAIKHLEIIRIGSRVPVTLPQRITPELCAILKRH 198 Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 P YI H NHP E + E A LA+AGI L +Q+VLLKG+NDDP+++ LM+ + Sbjct: 199 -HPFYINTHFNHPREITPETEKACGMLADAGIPLGNQAVLLKGVNDDPDVMVELMKGLLR 257 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 +R+KPYY++ DL GT HFR ++ G IVA+L+ ISGL P Y++D PGG GK+ + Sbjct: 258 IRVKPYYIYQADLVVGTDHFRTAVQTGLDIVAALRGHISGLGVPHYVVDAPGGGGKIAL 316 >gi|301058169|ref|ZP_07199221.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2] gi|300447801|gb|EFK11514.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2] Length = 354 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 132/323 (40%), Positives = 197/323 (60%), Gaps = 6/323 (1%) Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85 +++K + + Y + + P LI NDPI RQ +P EL+ DP+ + HSP Sbjct: 33 EKLKRVISRYPMRINPYYLGLIR--EKNDPIYRQSMPDIRELDD-KGAAPDPLNEEGHSP 89 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 ++G+ HRYPDR+LL + C VYCRFC R+ VG + +++ + E + YI+ ++ Sbjct: 90 VRGLTHRYPDRVLLLVSSECAVYCRFCNRKRKVG--RPGMVTDRSIEEGIDYIRAHREVR 147 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +V+ +GGDPL+L RL ++L L I HV+I+R +RVP PQRI PEL L++ Sbjct: 148 DVLLSGGDPLLLEDARLGEILSALHAISHVEIIRIGTRVPCTLPQRITPELAGLLQKF-H 206 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 P+Y+ +H NHP E + EA A +RLA+AGI L Q+VLLKG+NDDP ++ LMR + +R Sbjct: 207 PLYMNVHFNHPLEITAEATLACNRLADAGIPLGCQTVLLKGVNDDPSVMQELMRKLLIIR 266 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 +KPYYL H D A GTSHFR ++ G I+ L+ SGLC P + +DL GG GKV + Sbjct: 267 VKPYYLFHGDPARGTSHFRTSVSRGLNIIRELQGHTSGLCVPHFAIDLLGGGGKVPLLPD 326 Query: 326 NIKKVGNGSYCITDHHNIVHDYP 348 ++ +GS +T++ + +P Sbjct: 327 YLQGREDGSLLVTNYRGNAYRHP 349 >gi|254445491|ref|ZP_05058967.1| KamA family protein [Verrucomicrobiae bacterium DG1235] gi|198259799|gb|EDY84107.1| KamA family protein [Verrucomicrobiae bacterium DG1235] Length = 398 Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 130/351 (37%), Positives = 213/351 (60%), Gaps = 3/351 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ T Q + L +E+ + ++A+TP NLI+ +PN PI +Q Sbjct: 30 WQLKNRITTLEQLEQHMELTPEERAG-CAHANTKLAMAITPYFFNLIDREDPNCPIRKQV 88 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+++E+ + EE DP+G++ HSP+ G+VHRYPDR+L + C YCR+C R +V + Sbjct: 89 IPREDEMTVGQEEMLDPVGEDGHSPVPGLVHRYPDRVLFLVTDRCAAYCRYCTRSRLVSN 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + E L YI+E ++ +V+ +GGDPL+LS K+L +L LR I+HV+ +R Sbjct: 149 AQDYNFHP-EFEQGLKYIEEHPEVRDVLLSGGDPLLLSDKKLDYLLGRLRAIEHVEFIRI 207 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P+ PQRI PEL + K+ G P++++IH NHP E ++ A RL+ AG+ L +Q Sbjct: 208 GSRIPVFLPQRITPELCEIFKKHG-PIWMSIHTNHPKECTQTLKDACERLSFAGVPLGNQ 266 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLK +NDD E++ L+ V +R++PYY++ DL G++H R + +G +I+ L+ Sbjct: 267 SVLLKDVNDDLEVMKALVHRLVRMRVRPYYIYQCDLITGSAHLRANVCKGIEIMKGLRGH 326 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 +G P +++D PGG GKV I+ I K+ + + + ++ YP K+ Sbjct: 327 TTGYSVPQFVIDAPGGGGKVPINPQYITKIDDEAIHFKNFEGKLYRYPLKT 377 >gi|150020100|ref|YP_001305454.1| lysine 2,3-aminomutase YodO family protein [Thermosipho melanesiensis BI429] gi|149792621|gb|ABR30069.1| lysine 2,3-aminomutase YodO family protein [Thermosipho melanesiensis BI429] Length = 423 Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust. Identities = 132/347 (38%), Positives = 209/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ +T+ L + KE+ + I++ +A+TP A+L++P NP PI RQ Sbjct: 23 WQIRNR-ITNVDTLKKVINLTKEEEEGIRQSLKTLRMAITPYYASLMDPDNPKCPIRRQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EL + P + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G Sbjct: 82 VPTVKELEVKPWDMIDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAGQ 141 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T S + +AA+ YI+E Q+ +V+ +GGD L+ L+ +LK LR IKHV+I+R Sbjct: 142 HDRTRTKS-EIDAAIDYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQ + EL LK+ P++I + NHP E + E+ A LA+AGI L +Q Sbjct: 201 GTRAPVVIPQIVTKELTNMLKKY-HPIWINMQFNHPKEITSESSKACEMLADAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND P I+ L+ V++R++PYY++ DL+ G SHFR +I G KI+ SL Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGISHFRTSIGTGLKIMESLIGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P Y++D P G GK+++ + N + + ++ ++ Y Sbjct: 320 TSGFCVPTYVVDAPAGGGKIRLMPQYLISYSNNTAILRNYEGVIVAY 366 >gi|310658686|ref|YP_003936407.1| l-lysine 2,3-aminomutase [Clostridium sticklandii DSM 519] gi|308825464|emb|CBH21502.1| l-lysine 2,3-aminomutase [Clostridium sticklandii] Length = 414 Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 130/344 (37%), Positives = 211/344 (61%), Gaps = 12/344 (3%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + ++L + E+ + +K + +A+TP +LI+ NPNDP+ +Q Sbjct: 21 WQVRNR-IETVEELKKYIPLTPEEEEGVKRCLDTLRMAITPYYLSLIDVENPNDPVRKQA 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL+ ++EDP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G Sbjct: 80 VPLSLELHRAASDQEDPLHEDGDSPVPGLTHRYPDRVLLLMTDQCSMYCRHCTRRRFAG- 138 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + + +K +AA+ YI+ Q+ +V+ +GGD L++S ++L+ +K LR I HV+++R Sbjct: 139 QTDSAVDTKQIDAAIEYIKNTPQVRDVLLSGGDALLISDEKLEYTIKRLREIPHVEVIRI 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SRVP+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AGI L +Q Sbjct: 199 GSRVPVVMPQRITPELVSMLKKY-HPVWLNTHFNHPNEITEESKRACELLADAGIPLGNQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL G+ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 258 SVLLAGVNDCMHVMKKLVNDLVKIRVRPYYIYQCDLSVGIEHFRTPVAKGIEIIEGLRGH 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 SG C P +++D PGG GK + +Y I+ +HN V Sbjct: 318 TSGYCVPTFVVDAPGGGGKTPV---------MPNYVISQNHNKV 352 >gi|251773208|gb|EES53760.1| Lysine 2,3-aminomutase [Leptospirillum ferrodiazotrophum] Length = 411 Score = 255 bits (651), Expect = 8e-66, Method: Compositional matrix adjust. Identities = 134/352 (38%), Positives = 216/352 (61%), Gaps = 14/352 (3%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 +RH + + AN + E+++ + Y I + +LI+ +P DPI Q IP Sbjct: 12 IRHGADLPPEWVIEANGVGPEKVEGL------YPIRINDYYRSLIS--DPQDPIGLQVIP 63 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E + + EDP+G++ SP+ IVHRYPDR+L + + CP+YCR+C R+ +VG + Sbjct: 64 DPAEW-MDADSPEDPLGEDADSPVPAIVHRYPDRVLFLVTNQCPIYCRYCTRKRLVGKPE 122 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G V+S ++ + YI+E ++ +VI +GGDPL+L + L+++L LR I+H++I+R + Sbjct: 123 G-VVSREEIRQGIDYIREHPEVRDVILSGGDPLMLKDEVLEEILTGLRSIEHLEIIRIGT 181 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 RVP PQR+ PEL + L P+Y+ +H NHP E + E+ A LA+AGI L Q+V Sbjct: 182 RVPSALPQRVTPELCRMLSRF-HPLYMNLHFNHPREITPESSEACRLLADAGIPLGCQTV 240 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 L+KGINDD E+L L + +++R+KPYYL+ DL G +HFR +E+G I+ +L+ IS Sbjct: 241 LMKGINDDAEVLGTLFKGLLKIRVKPYYLYQADLTRGANHFRTPVEKGISIMKALQGNIS 300 Query: 303 GLCQPFYILDLPGGYGKVKI--DTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 G+ P +++D PGG GK+ + D + + + NG + ++ N ++ YP SS Sbjct: 301 GMAIPHFVIDAPGGGGKIPVLADDYLLGRE-NGQVLLKNYENKIYSYPDVSS 351 >gi|326391509|ref|ZP_08213042.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter ethanolicus JW 200] gi|325992438|gb|EGD50897.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter ethanolicus JW 200] Length = 423 Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust. Identities = 127/347 (36%), Positives = 212/347 (61%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + ++L + +E+ + I + +A+TP +LI+P++PNDPI ++ Sbjct: 29 WQIRNR-IETVEELKKYLPLTQEEEEAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRA 87 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E+ DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G Sbjct: 88 VPTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 146 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q L E A+ YI + QI +V+ +GGDPL LS RL++++K LR I HV+I+R Sbjct: 147 QTDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRI 206 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 S P+V PQRI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q Sbjct: 207 GSSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQ 265 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+ Sbjct: 266 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGH 325 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK+ + + + + + ++ ++ Y Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTY 372 >gi|34540806|ref|NP_905285.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83] gi|188995030|ref|YP_001929282.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277] gi|34397120|gb|AAQ66184.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83] gi|188594710|dbj|BAG33685.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277] Length = 416 Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust. Identities = 125/303 (41%), Positives = 192/303 (63%), Gaps = 2/303 (0%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + E+ + +KE +A+TP +LI+P NPN PI +Q IP +EL PE++ DP+ Sbjct: 41 LTAEEEEGVKESLKVLRMAITPYYLSLIDPENPNCPIRKQAIPTHQELVRAPEDQVDPLS 100 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 ++ SP+ G+ HRYPDR+L + C +YCR C RR G QK S+ + + YI Sbjct: 101 EDEDSPVPGLTHRYPDRVLFLITDKCSMYCRHCTRRRFAG-QKDASSPSERIDRCIDYIA 159 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + +V+ +GGD L++S +RL+ +LK LR I HV+I+R SR P+V PQRI P+L+ Sbjct: 160 NTPTVRDVLLSGGDALLVSDERLEYILKRLREIPHVEIVRIGSRTPVVLPQRITPQLVDM 219 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 LK+ PV++ H NHP E +EEA+ A R+ANAGI L +Q+VLL+GIND ++ L+ Sbjct: 220 LKKY-HPVWLNTHFNHPNEVTEEAVEACERMANAGIPLGNQTVLLRGINDCTHVMKRLVH 278 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 V++R++PYY++ DL+ G HFR + +G +I+ +L+ SG P +++D PGG GK Sbjct: 279 LLVKMRVRPYYIYVCDLSLGIGHFRTPVSKGIEIIENLRGHTSGYAVPTFVVDAPGGGGK 338 Query: 320 VKI 322 + + Sbjct: 339 IPV 341 >gi|307265361|ref|ZP_07546918.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306919645|gb|EFN49862.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 423 Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 127/347 (36%), Positives = 211/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + ++L + +E+ I + +A+TP +LI+P++PNDPI ++ Sbjct: 29 WQIRNR-IETVEELKKYLPLTQEEEQAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRA 87 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E+ DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G Sbjct: 88 VPTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFSG- 146 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q L E A+ YI + QI +V+ +GGDPL LS RL++++K LR I HV+I+R Sbjct: 147 QTDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRI 206 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 S P+V PQRI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q Sbjct: 207 GSSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQ 265 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+ Sbjct: 266 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGH 325 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK+ + + + + + ++ ++ Y Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTY 372 >gi|302341654|ref|YP_003806183.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii DSM 2075] gi|301638267|gb|ADK83589.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii DSM 2075] Length = 430 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 129/348 (37%), Positives = 204/348 (58%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ LT+ Q L + +E+ + ++ +A+TP +LI+ NP DP+ R Sbjct: 75 WQVRNR-LTNPQALERFFPLAQEERRAFEAVAGRLPMAITPYYLSLIDRQNPADPLRRAV 133 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E + P E DP+ ++ G+VHRYPDR+LL C YCR+C R +VG Sbjct: 134 VPTWMEAVVSPGESHDPLAEDADMAAPGLVHRYPDRVLLLATGFCSTYCRYCTRSRLVGG 193 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 G + E ALAYI+ + +V+ +GGDPL ++ RL+ +L LR ++HV+I+R Sbjct: 194 -GGMHTGKRALERALAYIEATPAVRDVLISGGDPLTMADDRLEWLLSRLRAMRHVEIIRI 252 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 S+VP V PQR+ P L + LK+ P++I++H HP E + EA A +RLA+AG+ L SQ Sbjct: 253 GSKVPAVLPQRVTPALTRMLKKY-HPLFISLHFMHPAELTVEAAKACARLADAGVPLGSQ 311 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL GINDD + LM+ + LR++PYYL+ D G++HFR + +G +IVA L+ Sbjct: 312 TVLLAGINDDVATMRALMQGLLRLRVRPYYLYQCDPICGSAHFRTPVAKGLEIVAGLRGH 371 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 +G P Y++D PGG GKV + ++ + + + ++ + YP Sbjct: 372 TTGYAVPTYVIDAPGGGGKVALYPESVIGRQDEALLLRNYEGGQYAYP 419 >gi|217076542|ref|YP_002334258.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B] gi|217036395|gb|ACJ74917.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B] Length = 423 Score = 253 bits (646), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 129/322 (40%), Positives = 198/322 (61%), Gaps = 3/322 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ +T L + E+ + I+ +A+TP A+L++P NP PI RQ Sbjct: 23 WQIRNR-ITDVDTLKQVINLTPEEENGIRNSLKTLRMAITPYYASLMDPDNPKCPIRRQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EL + P + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G Sbjct: 82 VPTIKELEVKPWDMVDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + ++ +AA+ YI+E Q+ +V+ +GGD L+ L+ +LK LR IKHV+I+R Sbjct: 141 QHDRARTKQEIDAAIEYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQ + EL LK+ P+++ H NHP E + E+ A LA+AGI L +Q Sbjct: 201 GSRAPVVIPQIVTKELTDMLKKY-HPIWLNTHFNHPKEITPESSRACEMLADAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND P I+ L+ V++R++PYYL+ DL+ G SHFR +I G +I+ SL Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYLYQCDLSQGISHFRTSIGTGLRIIESLIGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKI 322 SG C P Y++D P G GK+++ Sbjct: 320 TSGFCVPTYVVDAPAGGGKIRL 341 >gi|224368437|ref|YP_002602600.1| KamA2 [Desulfobacterium autotrophicum HRM2] gi|223691153|gb|ACN14436.1| KamA2 [Desulfobacterium autotrophicum HRM2] Length = 435 Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust. Identities = 128/317 (40%), Positives = 200/317 (63%), Gaps = 3/317 (0%) Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 +++TP +LI+P++P+ P+ + +P E + E +DP+G+++ SP+ G+VHRYPDR Sbjct: 118 LSITPYYLSLISPNDPDQPLRKSVVPTVHEWVKMGCESDDPLGEDHQSPVPGLVHRYPDR 177 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L LL C YCR+C R +VG G + E A+ YI + I +V+ +GGDPL Sbjct: 178 VLFLLLDFCSTYCRYCTRSRVVG-HGGILAGRARWEKAIEYIAKTPTIRDVLLSGGDPLT 236 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 LS RL+ VL LR I HV+I+R ++V V PQRI P+L++ LK P+++++H HP Sbjct: 237 LSDDRLEWVLSRLRKIPHVEIIRIGTKVTTVLPQRITPKLVKMLKRY-HPLWMSLHFTHP 295 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + EA A + LA+AGI L SQ+VLLKGIND+ E +A+LM +++R++PYYL+ D Sbjct: 296 DECTPEAYKACTMLADAGIPLGSQTVLLKGINDNVETMADLMHQLMKMRVRPYYLYQCDP 355 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336 G+ HFR +I++G +I+ L+ SG P Y++D PGG GK+ + +K+ + Sbjct: 356 ITGSGHFRTSIDKGLEIIHGLRGFTSGYAVPTYVVDAPGGGGKIPLMPDYVKEHTRETLV 415 Query: 337 ITDHHNIVHDYP-PKSS 352 +T++ + YP P SS Sbjct: 416 LTNYEDKTFCYPDPVSS 432 >gi|75423266|sp|Q9XBQ8|KAMA_CLOSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName: Full=KAM gi|5410603|gb|AAD43134.1|AF159146_1 L-lysine 2,3-aminomutase [Clostridium subterminale] Length = 416 Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 123/322 (38%), Positives = 201/322 (62%), Gaps = 3/322 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + ++L + KE+ + + + +A+TP +LI+P++PNDP+ +Q Sbjct: 22 WQVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRMAITPYYLSLIDPNDPNDPVRKQA 80 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP ELN + EDP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G Sbjct: 81 IPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAG- 139 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + + + A+ YI+ Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R Sbjct: 140 QSDDSMPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI 199 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AG+ L +Q Sbjct: 200 GSRTPVVLPQRITPELVNMLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQ 258 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 259 SVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGH 318 Query: 301 ISGLCQPFYILDLPGGYGKVKI 322 SG C P +++D PGG GK + Sbjct: 319 TSGYCVPTFVVDAPGGGGKTPV 340 >gi|260463114|ref|ZP_05811317.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium opportunistum WSM2075] gi|259031235|gb|EEW32508.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium opportunistum WSM2075] Length = 366 Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust. Identities = 136/305 (44%), Positives = 188/305 (61%), Gaps = 5/305 (1%) Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 +LI+ ++P DPI Q IP +EL E DPI D++ SP+ + HR+ DR+LL + Sbjct: 59 DLIDWNDPADPIRAQVIPSPDELVEAEGELGDPIADHDFSPVPRLTHRHGDRVLLFPTYQ 118 Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C VYCRFCFR+E + S G + + E ALAYI + S+I EVI TGGDPL LS K L + Sbjct: 119 CAVYCRFCFRKESLTS-IGRGYTREALEPALAYIADHSEIREVILTGGDPLSLSDKALAE 177 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEA 223 + + I HV++LR H+RVP+ P RI P L++ L+ G+ V + H NH E ++ A Sbjct: 178 IFMRIEAIPHVRLLRIHTRVPVALPSRITPGLVEALQ--GRLMVTVVTHFNHAREITDAA 235 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSH 282 AA + AG +LL+QSVLLKG+ND E+L L R + L +KPYYLHH DLA G +H Sbjct: 236 EAACRTMRQAGFVLLNQSVLLKGVNDSVEVLEELCRELMYRLGVKPYYLHHGDLARGMAH 295 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342 R TI +GQ +V +L+ ++SG+C P Y+LDLP G GKV + +I+ S+ I Sbjct: 296 RRTTIAQGQALVEALRARLSGICNPVYVLDLPEGGGKVPLGPCSIEGRDGESWRIRGQDG 355 Query: 343 IVHDY 347 V Y Sbjct: 356 AVRGY 360 >gi|78358081|ref|YP_389530.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220486|gb|ABB39835.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 527 Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust. Identities = 117/286 (40%), Positives = 179/286 (62%), Gaps = 1/286 (0%) Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 +A+TP A +PHNP P+ R +P EE ++ P E DP+G+++HSP+ G+VHRYPDR Sbjct: 190 LAVTPYYAAQFDPHNPAHPLRRTMVPTVEEWSLNPGESADPLGEDSHSPVPGLVHRYPDR 249 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L C YCR+C R VG S + AA+ YI+ ++ +V+ +GGDPL Sbjct: 250 VLFLATDSCSAYCRYCTRSRRVGKPCAGSASRRRWPAAIEYIENHPEVRDVLISGGDPLT 309 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 ++ L +L LR I HV+ +R ++ PIV PQRI P L++ L+ P++++IH HP Sbjct: 310 MTDSALNHLLSQLRRIPHVEFIRIGTKAPIVMPQRITPALVRMLRRY-HPLFMSIHCTHP 368 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + EA A++RLA+ GI L SQ+VLLKGIND+ + LM+ ++ R++PYYL+H D Sbjct: 369 DELTPEASQALNRLADGGIPLGSQTVLLKGINDNVPTMTALMQGLLKNRVRPYYLYHCDP 428 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 G++HFR I +G +I+ ++ +G P Y++D PGG GK+ + Sbjct: 429 VQGSAHFRTPIYKGVEIIRGMRGFTTGYAVPTYVVDAPGGGGKIPL 474 >gi|229496618|ref|ZP_04390332.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406] gi|229316515|gb|EEN82434.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406] Length = 418 Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust. Identities = 120/315 (38%), Positives = 197/315 (62%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + + DL + E+ + ++E +A+TP +LI+P++PNDP+ +Q +P EL Sbjct: 29 IETLDDLKKYVTLTPEEEEGVRESLKSLRMAITPYYLSLIDPNDPNDPVRKQSVPTANEL 88 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 I E++ DP+ ++ SP G+ HRYPDR+L + +C +YCR C RR G QK Sbjct: 89 IISEEDQLDPLSEDEDSPTPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-QKDAASP 147 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + + A+ YI+ ++ +V+ +GGD L++S ++ +L+ LR I HV+I+RF SR P+V Sbjct: 148 RERIDKAIEYIERTPEVRDVLLSGGDALMVSDSMIEYILQRLRAIDHVEIIRFGSRTPVV 207 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI PEL++ LK+ P+++ H NHP E + E+ A RLANAG+ L +Q+VLL+GI Sbjct: 208 LPQRITPELVEILKKY-HPIWLNTHFNHPNEITAESKEACERLANAGVPLGNQTVLLRGI 266 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+ SG P Sbjct: 267 NDCTYVMKKLVHELVKIRVRPYYIYVCDLSRGIGHFRTPVSKGIEIIENLRGHTSGYAVP 326 Query: 308 FYILDLPGGYGKVKI 322 +++D PGG GK+ + Sbjct: 327 TFVVDAPGGGGKIPV 341 >gi|51891173|ref|YP_073864.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863] gi|51854862|dbj|BAD39020.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863] Length = 448 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 126/323 (39%), Positives = 206/323 (63%), Gaps = 5/323 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ H+ +T+ + L + +E+ I++ + + + +TP A LI+P +P+ P+ Q Sbjct: 29 WQVSHR-ITNLEQLKQVVNLTEEEEAAIRDSQHLFRLGITPHYATLIDPDDPHCPMRLQA 87 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P+ EL E DP+ ++ SP+ GI HRYPDR+L + H C +YCR C RR +VG Sbjct: 88 VPKYAELAWADYEMGDPLHEDVDSPVPGITHRYPDRVLFLITHECSLYCRHCTRRRIVGD 147 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q+ +S+ + A+AYI+ +I +V+ +GGDPL + +RL+ V+K LR I HV+I+R Sbjct: 148 QEA--MSTAMLDQAIAYIRAHPEIRDVLISGGDPLAVPDRRLEYVIKKLRAIPHVEIIRI 205 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLS 239 +R+P+V PQRI PEL+ L++ P+++ H NHP+E +A A+ RLA+AGI + Sbjct: 206 GTRMPVVLPQRITPELVNMLRQY-HPIWLNTHFNHPFEVQHPKAREAMERLADAGIPTGN 264 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLKG+ND ++ L+ V++R +PYY+++ DL+ G SHFR ++ +G I+ +L+ Sbjct: 265 QSVLLKGVNDCAVVMRRLVHELVKVRCRPYYIYNCDLSEGLSHFRTSVAKGVAIIEALRG 324 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 SG C P +++D PGG GK+ + Sbjct: 325 HTSGFCVPTFVVDAPGGGGKIPV 347 >gi|148264204|ref|YP_001230910.1| lysine 2,3-aminomutase YodO family protein [Geobacter uraniireducens Rf4] gi|146397704|gb|ABQ26337.1| L-lysine 2,3-aminomutase [Geobacter uraniireducens Rf4] Length = 347 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 136/348 (39%), Positives = 208/348 (59%), Gaps = 13/348 (3%) Query: 8 LTSAQDLYNANLIKKEQI--------DEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 + Q++ A++ EQ+ + + + Y + +TP NLIN P DP+ RQ Sbjct: 1 MGKWQNILAASITSPEQLARRFGIDAEPLLRVVQRYPMRITPYYLNLIN--EPGDPLWRQ 58 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P EL ++EDP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG Sbjct: 59 CVPDARELED-DLQQEDPLREEILSPVPGLIHRYPDRVVWLVSSTCAVYCRFCMRKRQVG 117 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 G V AAL YI + +I +VI +GGDPL+L L+++L LR I H++I+R Sbjct: 118 C-VGAVTGKVQISAALDYIASRPEIRDVILSGGDPLLLDDDALEEILARLRQIPHLEIIR 176 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 SRVP+ P+RI L + LK P+YI H NHP E + E+ A +RLA+AGI L + Sbjct: 177 IGSRVPVTLPERITTRLCRMLKRY-HPLYINTHFNHPLEITAESATACARLADAGIPLGN 235 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLKG+ND+P ++ LM+ +++R+KPYY+H DL GT HFR +E+G +I+ SL+ Sbjct: 236 QTVLLKGVNDNPGVMKRLMQLLLKIRVKPYYIHQMDLVKGTGHFRTRVEQGLEIMESLRG 295 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG+ P+Y++DL GG GKV + +K+VG + ++ + +Y Sbjct: 296 HTSGMASPYYVIDLEGGKGKVPLLPDYVKRVGGNVLLVRNYRGEMVEY 343 >gi|197118777|ref|YP_002139204.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem] gi|197088137|gb|ACH39408.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem] Length = 344 Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust. Identities = 125/315 (39%), Positives = 190/315 (60%), Gaps = 10/315 (3%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TS ++L + + Q + Y + +TP LI P DPI RQ +P EL Sbjct: 12 ITSPEELSG---LFRLQGGAFSPVVERYPMRITPYYLGLIE--EPGDPIWRQCVPDPAEL 66 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + L + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG ++ Sbjct: 67 DDL-TQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGCAS---MA 122 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + A+AYI +I +V+ +GGDPL+L RL +L L I HV+I+R +R P+ Sbjct: 123 PAKVDDAIAYIAGDPRIRDVVLSGGDPLLLPDDRLAAILSALSRIPHVEIVRIGTRAPVT 182 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P+RI P L + LK + PVY+ H NHP E + ++ A +RLA+AG+ L +Q+VLLKG+ Sbjct: 183 LPERITPGLTRLLKRS-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTVLLKGV 241 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 NDDP+ + +LMR + +R++PYY+H DL GT+HFR + +G ++ +L+ SGL P Sbjct: 242 NDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVGQGISVMQALRGHTSGLAVP 301 Query: 308 FYILDLPGGYGKVKI 322 Y++DLPGG GKV + Sbjct: 302 HYVIDLPGGKGKVDV 316 >gi|154248906|ref|YP_001409731.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium nodosum Rt17-B1] gi|154152842|gb|ABS60074.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium nodosum Rt17-B1] Length = 422 Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust. Identities = 122/311 (39%), Positives = 197/311 (63%), Gaps = 9/311 (2%) Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 +A+TP A+L++P NP PI RQ +P +EL + DP+ ++ SP+ G+ HRYPDR Sbjct: 59 MAITPYYASLMDPDNPKCPIRRQAVPTAKELFTSQWDMTDPLHEDEDSPVPGLTHRYPDR 118 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L+ + +C +YCR C RR G Q + ++ +A + Y++E Q+ +V+ +GGD L+ Sbjct: 119 VLMLVTDMCSMYCRHCTRRRFAG-QHDRARTKQEIDAMIEYVRETPQVRDVLISGGDGLL 177 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + + L+ +LK LR IKHV+I+R +R P+V PQ I PEL LK+ P++I H NHP Sbjct: 178 VGIEMLEYILKELRKIKHVEIIRIGTRTPVVLPQMITPELTNMLKKY-HPIWINTHFNHP 236 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + E+ A LA+AGI L +QSVLL+GIND P I+ L+ V++R++PYY++ DL Sbjct: 237 KEITPESSRACEMLADAGIPLGNQSVLLRGINDSPYIMMELVHQLVKIRVRPYYIYQCDL 296 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336 + G +HFR ++++G +I+ +L SG C P++++D P G GK+++ + N Sbjct: 297 SQGLTHFRTSVKKGLEIMEALIGHTSGFCVPWFVVDAPAGGGKIRV-------MPNYVIS 349 Query: 337 ITDHHNIVHDY 347 ++DH I+ +Y Sbjct: 350 MSDHTVILRNY 360 >gi|20807210|ref|NP_622381.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4] gi|254478895|ref|ZP_05092258.1| KamA family protein [Carboxydibrachium pacificum DSM 12653] gi|20515713|gb|AAM23985.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4] gi|214035161|gb|EEB75872.1| KamA family protein [Carboxydibrachium pacificum DSM 12653] Length = 417 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 123/340 (36%), Positives = 206/340 (60%), Gaps = 2/340 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + + ++L + +E+ + I + +A+TP +LI+P++PNDPI ++ +P EL Sbjct: 29 IETVEELKKYLPLSEEEEEAISKALQKLRMAITPYYLSLIDPNDPNDPIRKRAVPTIHEL 88 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 PE+ DP+ ++ SP+ G+ HRYPDR+L+ + C +YCR C RR G + Sbjct: 89 YQAPEDLVDPLYEDVDSPVPGLTHRYPDRVLMLVTDQCSMYCRHCTRRRFAGETDAPMPM 148 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 K E + YI+ QI +V+ +GGDPL LS RL++++K LR I HV+I+R S VP+V Sbjct: 149 DK-IEKQIEYIRNTPQIRDVLISGGDPLTLSDSRLEEIIKRLREIPHVEIIRIGSSVPVV 207 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P RI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q+VLL+G+ Sbjct: 208 LPMRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSKRACEMLADAGIPLGNQTVLLRGV 266 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ L+ SG C P Sbjct: 267 NDCVHVMKKLVHELVKIRVRPYYIYQCDLSFGLSHFRTPVSKGIEIIEGLRGHTSGYCVP 326 Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +++D PGG GK+ + + + + + ++ ++ Y Sbjct: 327 TFVVDAPGGGGKIPVGPNYVISQSHDKIVLRNYEGVIVTY 366 >gi|158521904|ref|YP_001529774.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus oleovorans Hxd3] gi|158510730|gb|ABW67697.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus oleovorans Hxd3] Length = 454 Score = 248 bits (634), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 123/327 (37%), Positives = 193/327 (59%), Gaps = 4/327 (1%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 E++ E+ + +TP +L++ P P+ R +P E LP E DP+G+ Sbjct: 111 EEMGVFAELKTKLPLGVTPYYMSLLHGSAPGHPLRRTVVPTVHEFFKLPGEENDPLGEEG 170 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEK 141 H+ + G+VHRYPDR+LL + C YCR+C R +VG +G + S+ E A+ YI+ Sbjct: 171 HTQMPGLVHRYPDRVLLLVSGFCSTYCRYCTRSRLVG--RGKIYPSRSRLEKAIDYIRNT 228 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 I +V+ +GGDPL LS +L +L +R I HV+I+R ++VP V PQR+ PEL++ L+ Sbjct: 229 PTIRDVLLSGGDPLTLSDAKLDWILGRIREIPHVEIIRIGTKVPAVLPQRVTPELVRVLR 288 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 + P+++++H HP E + EA A + LA+AGI L SQ+VLLKGINDD + LM Sbjct: 289 KY-HPLWMSLHFTHPEECTPEAYDACAMLADAGIPLGSQTVLLKGINDDVATMKALMHQM 347 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 + +R+KPYYL+ D AG+ HFR ++ G +I+ L+ SG P Y++D PGG GK+ Sbjct: 348 MRMRVKPYYLYQCDPVAGSGHFRTSVARGLEIIRGLRGHTSGYAVPTYVIDAPGGGGKIP 407 Query: 322 IDTHNIKKVGNGSYCITDHHNIVHDYP 348 + + + + + ++ N + YP Sbjct: 408 LLPNYVVSSSDAGVVLENYENRLFTYP 434 >gi|312621465|ref|YP_004023078.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor kronotskyensis 2002] gi|312201932|gb|ADQ45259.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor kronotskyensis 2002] Length = 407 Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust. Identities = 129/324 (39%), Positives = 204/324 (62%), Gaps = 9/324 (2%) Query: 1 MQLRHKTLTSA--QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 QL+++ +S ++L N + + EQI+E+ + Y A++P +LI+P NPN PI + Sbjct: 63 WQLKNRVASSKILKELLNLDEKEAEQIEEV---AKSYRFAISPYYLSLIDPDNPNCPIKK 119 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q +P EL + + DP+ + + SP K I RYPDR+++K+ ++C ++CRFC RR ++ Sbjct: 120 QSVPSSFEL--IEKGELDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLI 177 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G + T S D A+ Y+ + I +V+ TGGD L+LS + L +L++LR I HV+I+ Sbjct: 178 G-ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLDWILRSLRQIPHVEII 236 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R +R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A L++AG+ L Sbjct: 237 RIGTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLSDAGVPLG 295 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ Sbjct: 296 NQMVLLNGVNNDKYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLR 355 Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322 + SG+ P YI++ P G GK I Sbjct: 356 GRTSGMAVPTYIINAPKGKGKTPI 379 >gi|15807697|ref|NP_285351.1| hypothetical protein DR_A0027 [Deinococcus radiodurans R1] gi|6460574|gb|AAF12280.1|AE001862_106 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 492 Score = 248 bits (633), Expect = 9e-64, Method: Compositional matrix adjust. Identities = 118/288 (40%), Positives = 180/288 (62%), Gaps = 2/288 (0%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 + + +TP A+L++P +P P+ RQ IP +EEL ED + ++ HSP+ G+VHRYP Sbjct: 81 FRLDITPYFASLMDPEDPTCPVRRQVIPTEEELQPFTSMMEDSLAEDKHSPVPGLVHRYP 140 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 DR+L+ + C YCR+C R +VG T + + EA L Y++ Q+ +V+ +GGDP Sbjct: 141 DRVLMLVTTQCASYCRYCTRSRIVGDPTET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDP 199 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L L+ K L ++L LR I+H++I+R +RVP+ P R+ EL L E P+++ IH N Sbjct: 200 LTLAPKVLGRLLSELRKIEHIEIIRIGTRVPVFMPMRVTQELCDTLAEH-HPLWMNIHVN 258 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 HP E + E A RL AG+ L +QSVLL+G+ND P I+ L+R V++R++PYY++ Sbjct: 259 HPKEITPEVAEACDRLTRAGVPLGNQSVLLRGVNDHPVIMQKLLRELVKIRVRPYYIYQC 318 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 DL G H R T+ +G +I+ SL+ SG P Y++D PGG GK+ + Sbjct: 319 DLVHGAGHLRTTVSKGLEIMESLRGHTSGYSVPTYVVDAPGGGGKIPV 366 >gi|331004173|ref|ZP_08327653.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str. F0167] gi|330411583|gb|EGG90993.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str. F0167] Length = 418 Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 122/347 (35%), Positives = 212/347 (61%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLR++ +T+ + L + +++ + +K + +A+TP +LI+ + +DP+ +Q Sbjct: 23 WQLRNR-ITNVESLKKYIKLTEKEEEGVKRCLENLRMAITPYYLSLIDLEDEDDPVRKQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL+I + DP+ ++ SP+ G+ HRYPDR+L + C +YCR C RR G Sbjct: 82 IPTVSELHIADADLADPLHEDTDSPVHGLTHRYPDRVLFLVTDQCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q T + + +A + YI+ ++ +V+ +GGD L++S+++L+ ++ LR I+HV+I+R Sbjct: 141 QNDTSVPTSQVDACIDYIRRHPEVRDVLLSGGDALLISNEKLEYIISELRKIEHVEIVRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL+ LK+ PV++ H NHP E ++E+ A +RLA+AGI L +Q Sbjct: 201 GSRTPVVMPQRITPELVNMLKKY-HPVWLNTHFNHPSEITKESAEACARLADAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL G+ND I+ +L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 260 TVLLAGVNDCVHIMTDLVHELVKIRVRPYYIYQCDLSQGLEHFRTPVSKGIEIIEGLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK + + + G + ++ ++ Y Sbjct: 320 TSGYCVPTFVVDAPGGGGKTPVMPNYVISQSPGKVILRNYEGVITTY 366 >gi|226355793|ref|YP_002785533.1| L-lysine 2,3-aminomutase [Deinococcus deserti VCD115] gi|226317783|gb|ACO45779.1| putative L-lysine 2,3-aminomutase [Deinococcus deserti VCD115] Length = 493 Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 119/288 (41%), Positives = 178/288 (61%), Gaps = 2/288 (0%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 + + +TP A+L++P +P P+ RQ IP EL ED + ++ HSP+ G+VHRYP Sbjct: 73 FRLDITPYFASLMDPEDPTCPVRRQVIPTHHELTPFTSMMEDSLAEDKHSPVPGLVHRYP 132 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 DR+L+ + C YCR+C R +VG T + + EA L Y++ Q+ +V+ +GGDP Sbjct: 133 DRVLMLVTTQCASYCRYCTRSRIVGDPSET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDP 191 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L L+ K L ++L LR I+H++I+R +RVP+ P R+ EL L E PV++ IH N Sbjct: 192 LTLAPKVLGRLLAELRKIEHIEIVRIGTRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVN 250 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 HP E + E A RL AG+ L +QSVLL+GIND P I+ L+R V++R++PYY++ Sbjct: 251 HPREITPEVAEACDRLTRAGVPLGNQSVLLRGINDHPVIMQKLVRELVKIRVRPYYIYQC 310 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 DL G H R T+ +G +I+ SL+ SG P Y++D PGG GK+ + Sbjct: 311 DLVHGAGHLRTTVSKGLEIMESLRGHTSGYSVPTYVVDAPGGGGKIPV 358 >gi|312877848|ref|ZP_07737796.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795395|gb|EFR11776.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor lactoaceticus 6A] Length = 407 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 130/335 (38%), Positives = 209/335 (62%), Gaps = 9/335 (2%) Query: 1 MQLRHKTLTSA--QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 QL+++ L++ ++L N N + +QI+E+ ++ Y A++P LI+P +PN PI + Sbjct: 63 WQLKNRVLSAKTLKELLNLNEKETQQIEEVAKV---YRFAISPYYLLLIDPDDPNCPIKK 119 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q +P EL + + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++ Sbjct: 120 QSVPSSFEL--IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLI 177 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+ Sbjct: 178 G-ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEII 236 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R +R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A LA++GI L Sbjct: 237 RIGTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLADSGIPLG 295 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ Sbjct: 296 NQMVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLR 355 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 + SG+ P YI++ P G GK I + G G Sbjct: 356 GRTSGMAVPTYIINAPKGKGKTPIMPSYLLYFGKG 390 >gi|282897351|ref|ZP_06305353.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii D9] gi|281198003|gb|EFA72897.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii D9] Length = 375 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 126/347 (36%), Positives = 203/347 (58%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+RH+ LT + + E+ + +++A+TP A+L++P + N P+ Q Sbjct: 28 WQMRHR-LTKLEQFQKLLCLTPEEEQGFIMAVDKFAVAVTPYFASLLDPEDANCPLRLQV 86 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+KEEL + + DP G++N SP+ GIVHRYPDR+LL L C YCR+C R +V Sbjct: 87 IPRKEELIVSSGDMIDPCGEDNQSPVPGIVHRYPDRVLLLALDSCAAYCRYCTRSRLVSQ 146 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T + + +A + Y+++ +++ +V+ +GGDPL++S++ L +L LR I H++ +R Sbjct: 147 GEMTPIKHR-LDAMINYLEDHTEVRDVLISGGDPLLMSNQVLDSLLGRLRGISHIEFVRI 205 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SRVP PQRI PEL++ L++ V++++H H E + E A LA+ GI L Q Sbjct: 206 GSRVPCFLPQRITPELVKVLRK--HRVWLSVHFCHLRELTLEVAQACDLLADGGIPLGCQ 263 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+ND + L NL ++LR++PYYL+ D GTSH R +I+ G +++ L+ Sbjct: 264 TVLLKGVNDSEQALKNLFHGLLKLRVRPYYLYQCDPVVGTSHLRTSIQSGLDLISKLRSH 323 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +G P Y++D PGG GKV I + NG + + + Y Sbjct: 324 TTGYAIPTYVIDAPGGGGKVPIQPETLIGYENGKAIVKNWQDRSFTY 370 >gi|312794434|ref|YP_004027357.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181574|gb|ADQ41744.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 407 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 128/333 (38%), Positives = 208/333 (62%), Gaps = 5/333 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ L SA+ L + +++ +I+E++ Y A++P +LI+P +PN PI +Q Sbjct: 63 WQLKNRVL-SAKTLKELLNLDEKETQQIEEVAKAYRFAISPYYLSLIDPDDPNCPIKKQS 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL + + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G Sbjct: 122 VPSSLEL--IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-PPIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ +L+ + Sbjct: 298 MVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIENLRGR 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 SG+ P YI++ P G GK I + G G Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPSYLLYFGKG 390 >gi|197121711|ref|YP_002133662.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K] gi|196171560|gb|ACG72533.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K] Length = 415 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 122/304 (40%), Positives = 182/304 (59%), Gaps = 2/304 (0%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + E+ + + + + +TP A L++P +P PI Q +P ELNIL + EDP+ Sbjct: 87 VTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQSVPTMGELNILASDLEDPLA 146 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + P+ GI HRYPDR+L H CPVYCR C R+ V S + + + E +LAYI Sbjct: 147 EERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKV-SDPTSAAAKRQIEESLAYIA 205 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + ++I +V+ +GGDPL LS RL +L LR I HV+I R +R + PQR+ + + Sbjct: 206 QHTEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRLGTRNLVTLPQRVTDDFVYM 265 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 L+ PVY+ H NHP E + EA A RLA+AG ++ +Q VLLKG+NDDP ++ L Sbjct: 266 LRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQMVLLKGVNDDPAVVKELNH 324 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + +RI+PYY++ DLA G SHFR +E G +I+ +L+ SGL P +++D P G GK Sbjct: 325 KLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGHTSGLAVPQFVVDAPNGGGK 384 Query: 320 VKID 323 + ++ Sbjct: 385 IPVN 388 >gi|220916508|ref|YP_002491812.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954362|gb|ACL64746.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 415 Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 122/304 (40%), Positives = 182/304 (59%), Gaps = 2/304 (0%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + E+ + + + + +TP A L++P +P PI Q +P ELNIL + EDP+ Sbjct: 87 VTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQSVPTMGELNILASDLEDPLA 146 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + P+ GI HRYPDR+L H CPVYCR C R+ V S + + + E +LAYI Sbjct: 147 EERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKV-SDPTSAAAKRQIEESLAYIA 205 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + ++I +V+ +GGDPL LS RL +L LR I HV+I R +R + PQR+ + + Sbjct: 206 QHTEIRDVVISGGDPLSLSDDRLDHILGRLRAIPHVEIFRLGTRNLVTLPQRVTDDFVYM 265 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 L+ PVY+ H NHP E + EA A RLA+AG ++ +Q VLLKG+NDDP ++ L Sbjct: 266 LRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQMVLLKGVNDDPAVVKELNH 324 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + +RI+PYY++ DLA G SHFR +E G +I+ +L+ SGL P +++D P G GK Sbjct: 325 KLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGHTSGLAVPQFVVDAPNGGGK 384 Query: 320 VKID 323 + ++ Sbjct: 385 IPVN 388 >gi|188587476|ref|YP_001919021.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352163|gb|ACB86433.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 416 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 124/305 (40%), Positives = 192/305 (62%), Gaps = 3/305 (0%) Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77 NL KE+ + I++ +A+TP A+L++ +P+ PI RQ +P ELN + EDP Sbjct: 38 NLTDKEE-EGIQQALKTLRMAITPYYASLMDKDDPSCPIRRQAVPSSLELNFGDSDLEDP 96 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 + ++ SP++GI HRYPDR+L + C +YCR C RR + G+ + + A+ Y Sbjct: 97 LSEDTDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRIAGTTDKAA-PKEVVDNAIEY 155 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197 I+ ++ +V+ +GGD LI+S +RL+ +L L I+HV+I+R +R P+V PQRI +L+ Sbjct: 156 IKNTPRVRDVLISGGDGLIISDERLEYILDQLYKIEHVEIIRIGTRAPVVLPQRITDDLV 215 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 LK+ PV++ H NHP E + EA A+++LA+AGI L +QSVLLKGIND P + NL Sbjct: 216 SILKKY-HPVWLNTHYNHPKELTSEAQKALAKLADAGIPLGNQSVLLKGINDCPGTMKNL 274 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 + V+ R++PYY++ DL+ G HFR ++ G +IV L+ SG P Y++D PGG Sbjct: 275 VHELVKHRVRPYYIYQCDLSQGIEHFRTSVSAGLEIVEHLRGHTSGFAVPTYVVDAPGGG 334 Query: 318 GKVKI 322 GK+ + Sbjct: 335 GKIPV 339 >gi|308272545|emb|CBX29149.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.] Length = 425 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 125/332 (37%), Positives = 197/332 (59%), Gaps = 1/332 (0%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + E+ D IK ++ +++TP A+L++ NP P+ R +P + EL E EDP+G Sbjct: 85 LSAEETDAIKTNGDNLPLSITPYYASLLDKTNPMHPLRRAVVPVRAELCRSFGEAEDPLG 144 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 ++ SP+ GIVHRYPDR+L + C YCR+C R MVG + + E AL YI+ Sbjct: 145 EDADSPVPGIVHRYPDRVLFLVTDFCSTYCRYCTRSRMVGRSSACHGGTSNWEKALNYIE 204 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + I +V+ +GGDPL L+ L+ +L L I+H++I+R ++VP+V PQRI L + Sbjct: 205 ANTGIRDVLLSGGDPLTLNDDALEWLLLRLCRIQHLEIVRIGTKVPVVLPQRITSRLARM 264 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 LK P++I IH HP E + E A +RLA+AGI L SQ+VLLKGINDD + + L Sbjct: 265 LKRY-HPLWINIHFMHPEEVTPETSTACTRLADAGIPLGSQTVLLKGINDDVDTMKELYH 323 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 +++R++PYYL+ D G+ HFR ++++G +I+ L+ SGL P +++D PGG GK Sbjct: 324 RLLKIRVRPYYLYQCDPIIGSGHFRTSVKKGLEIIKGLRGHTSGLAVPNFVIDAPGGGGK 383 Query: 320 VKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 + + + + ++ +++ YP S Sbjct: 384 IPLLPEYVLGRYGDEILLKNYEDLIFRYPDSS 415 >gi|332703220|ref|ZP_08423308.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus str. Walvis Bay] gi|332553369|gb|EGJ50413.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus str. Walvis Bay] Length = 430 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 125/327 (38%), Positives = 192/327 (58%), Gaps = 3/327 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+ + +TS QDL + L E +A+TP +L + P++ + R Sbjct: 73 WQLKSR-ITSYQDL-GSMLALSEAEQAAANCGAPLPLAITPYYLSLFHDQGPDNGVRRSI 130 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E + P E EDP+G+++HSP+ G+VHRYPDR+L C YCR+C R VG Sbjct: 131 VPTGFERLVNPGEAEDPLGEDHHSPVPGLVHRYPDRVLFLTTDYCAAYCRYCTRSRRVGK 190 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + K +AA+ YI + +V+ +GGDPL +S L +L +R I HV+++R Sbjct: 191 KACSSGNRKHWDAAIDYIARTPSVRDVLLSGGDPLTMSDAALDYLLGRIRAIPHVEVMRI 250 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 ++ P+V PQRI P+L + L+ P+ I++H HP E S E+ A RLA+AGI L SQ Sbjct: 251 GTKAPMVLPQRITPQLTRVLRRY-HPLMISVHCTHPGELSPESAEAFKRLADAGIPLGSQ 309 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGINDD L +LM ++ R++PYYL+H D GT HFR ++ +G +++ L+ Sbjct: 310 TVLLKGINDDVPTLKSLMHGLLKNRVRPYYLYHCDPVQGTGHFRTSVAKGVEMIEGLRGH 369 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNI 327 SG P +++D PGG GK+ ++ I Sbjct: 370 TSGYAIPTFVVDAPGGGGKIPVNPDYI 396 >gi|225734347|pdb|2A5H|A Chain A, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3- Aminomutase From Clostridium Subterminale Sb4, With Michaelis Analog (L-Alpha-Lysine External Aldimine Form Of Pyridoxal-5'-Phosphate). gi|225734348|pdb|2A5H|B Chain B, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3- Aminomutase From Clostridium Subterminale Sb4, With Michaelis Analog (L-Alpha-Lysine External Aldimine Form Of Pyridoxal-5'-Phosphate). gi|225734349|pdb|2A5H|C Chain C, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3- Aminomutase From Clostridium Subterminale Sb4, With Michaelis Analog (L-Alpha-Lysine External Aldimine Form Of Pyridoxal-5'-Phosphate). gi|225734350|pdb|2A5H|D Chain D, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3- Aminomutase From Clostridium Subterminale Sb4, With Michaelis Analog (L-Alpha-Lysine External Aldimine Form Of Pyridoxal-5'-Phosphate) Length = 416 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 123/322 (38%), Positives = 196/322 (60%), Gaps = 3/322 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + ++L + KE+ + + + A+TP +LI+P++PNDP+ +Q Sbjct: 22 WQVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRXAITPYYLSLIDPNDPNDPVRKQA 80 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP ELN + EDP+ ++ SP+ G+ HRYPDR+LL + C YCR C RR G Sbjct: 81 IPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDXCSXYCRHCTRRRFAG- 139 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + + A+ YI+ Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R Sbjct: 140 QSDDSXPXERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI 199 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AG+ L +Q Sbjct: 200 GSRTPVVLPQRITPELVNXLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQ 258 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND + L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 259 SVLLRGVNDCVHVXKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGH 318 Query: 301 ISGLCQPFYILDLPGGYGKVKI 322 SG C P +++D PGG GK + Sbjct: 319 TSGYCVPTFVVDAPGGGGKTPV 340 >gi|193213047|ref|YP_001999000.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum NCIB 8327] gi|193086524|gb|ACF11800.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum NCIB 8327] Length = 440 Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 129/350 (36%), Positives = 204/350 (58%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+RH + L + + L + L EQ E + ++ TP +LIN + NDP+ Sbjct: 28 WQMRHSIRDLDTFERLLDITL-SDEQRKAFGETVQKFPMSTTPYYLSLINTDDMENDPVF 86 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q +P EL I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+ Sbjct: 87 LQSVPSPLELKIMKGDMADPLHEDEDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + T+ + +A + YI+ Q+ +V+ +GGDP +LS + L +L LR I+HV+I Sbjct: 147 VGDED-TIPNRAAIQAGIDYIRNTPQVRDVLLSGGDPFLLSDEMLDWILTELRAIEHVEI 205 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V PQRI PEL+ L + +PV++ H NHP E ++ A A++RLA+ G+ L Sbjct: 206 IRVGTRTPVVLPQRITPELVAILGKH-QPVWVNTHFNHPREMTQSARNALARLADVGVPL 264 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P Y++D PGG GK+ + + + + ++ ++ Y Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTY 374 >gi|312135958|ref|YP_004003296.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor owensensis OL] gi|311776009|gb|ADQ05496.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor owensensis OL] Length = 407 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 129/333 (38%), Positives = 210/333 (63%), Gaps = 5/333 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +PN PI +Q Sbjct: 63 WQLKNR-ITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPNCPIKKQS 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL + + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G Sbjct: 122 VPSSFEL--IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R Sbjct: 179 ETDTHASLDDITDAIEYVAKNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQ+I EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q Sbjct: 239 GTRAPVTLPQKITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL G+N+D I+ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ + Sbjct: 298 MVLLNGVNNDKYIVRKLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 SG+ P YI++ P G GK I + + G G Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKG 390 >gi|297569348|ref|YP_003690692.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio alkaliphilus AHT2] gi|296925263|gb|ADH86073.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio alkaliphilus AHT2] Length = 360 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 131/324 (40%), Positives = 195/324 (60%), Gaps = 10/324 (3%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL--NILPEEREDPIGDNNHSP 85 +K ++ Y + + P +LIN P DPI RQ +P EL + P DP+G+ ++SP Sbjct: 41 LKAVTARYPLRINPYYLSLIN--QPGDPIWRQAVPDVRELEDTVCPA---DPLGEEDYSP 95 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQI 144 + G+VH+Y DR LL + C +YCRFC R+ VG+++ S+ +AALAY+++ I Sbjct: 96 VPGLVHKYRDRALLLVTGQCAMYCRFCTRKRKVGTREMAAAGSAAQLDAALAYLEQTPAI 155 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 +V+ +GGDPL+L RL +L LR I+H++I+R SRVP PQR+ +L LK+ Sbjct: 156 HDVLISGGDPLLLPDGRLIPLLTRLRRIRHLEIIRLGSRVPCTLPQRVTLKLAAALKKF- 214 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 P++I H NHP E + EA A RLA+AGI L +Q+VLLKG+NDD + LMR +++ Sbjct: 215 HPLFINTHFNHPREITPEAARACQRLADAGIPLGNQTVLLKGVNDDAATIRELMRGLLKI 274 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 R+KPYYL DL+ GT HFR +E+G I+ L SGL P + LD P G GK+ + Sbjct: 275 RVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLATPTFALDAPEGRGKIPLTP 334 Query: 325 HNIKKVGNGSYCITDHHNIVHDYP 348 ++ +G+ T++ + YP Sbjct: 335 DYLQSLGD-KLIFTNYQGLPCQYP 357 >gi|218961635|ref|YP_001741410.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas acidaminovorans] gi|167730292|emb|CAO81204.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas acidaminovorans] Length = 415 Score = 246 bits (628), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 126/321 (39%), Positives = 200/321 (62%), Gaps = 3/321 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q++++ T AQ L ++ E+ K+ + + +A+TP +LI+ NP DPI Q I Sbjct: 22 QIKNRITTHAQ-LSKYIELQPEEEAVFKDKAFSFRMAITPHYLSLIDHSNPYDPIRLQAI 80 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P+ E +I P + DP+ ++ +P+ G+ HRYPDR+LL L C +YCR C RR G Sbjct: 81 PRIAESHISPSDMADPLSEDADAPVPGMTHRYPDRVLLLLTDQCAMYCRHCTRRRKAGEH 140 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + ++ E AL YI+E ++ +VI +GGDPL LS +RL +L L I+H++I+R Sbjct: 141 DAP-MPKENVEKALEYIKEHKEVRDVILSGGDPLTLSDERLDDILNRLSKIEHIEIVRLG 199 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +R P+V PQR L+ L++ K V++ H NHP E E++ A++++A GI + +QS Sbjct: 200 TRTPVVLPQRFTDSLLNILQKY-KFVWLNTHYNHPNELCEDSCKALAKIAETGIPMGNQS 258 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND+ +++ L+ V+ R++PYY++ DL+ G SHFR I +G +I+ SL+ Sbjct: 259 VLLKGVNDNVDVMKALVHKLVKNRVRPYYIYQCDLSEGISHFRTPIAKGIEIMESLRGHT 318 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 SGLC P Y++D PGG GK+ + Sbjct: 319 SGLCVPTYVVDAPGGGGKIPV 339 >gi|145220171|ref|YP_001130880.1| L-lysine 2,3-aminomutase [Prosthecochloris vibrioformis DSM 265] gi|145206335|gb|ABP37378.1| L-lysine 2,3-aminomutase [Chlorobium phaeovibrioides DSM 265] Length = 441 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 123/329 (37%), Positives = 197/329 (59%), Gaps = 3/329 (0%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPI 78 + EQ + + + + +++TP +LIN + NDP+ Q +P EL+ILP + DP+ Sbjct: 48 LSHEQREAFTQTAAKFPMSITPYYLSLINTADMENDPVFLQSVPSPRELHILPGDMADPL 107 Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 ++ SP + HRYPDR+LL + + CP+YCR C R+ VG Q T+ S A + YI Sbjct: 108 HEDRDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRKVGDQD-TIPSRAAISAGIEYI 166 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 ++ ++ +V+ +GGDP +LS + L +L LR I HV+I+R +R P+V PQRI PEL+ Sbjct: 167 RQTPRVRDVLLSGGDPFLLSDEYLDWILTELRAIPHVEIIRIGTRTPVVLPQRITPELVA 226 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 LK+ +PV++ H NHP E ++ + A++ LA+ G+ L +Q+VLL GIND P I+ L+ Sbjct: 227 MLKKH-QPVWVNTHFNHPRELTQSSKNALAMLADGGLPLGNQTVLLSGINDCPRIMKALV 285 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318 V R++PYYL+ DL+ G SHFR + +G +I+ SL SG P Y++D PGG G Sbjct: 286 HKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFSVPTYVIDAPGGGG 345 Query: 319 KVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 K+ + + + + ++ ++ Y Sbjct: 346 KIPVMPNYLISWSTNKVVLRNYEGVITTY 374 >gi|167752794|ref|ZP_02424921.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216] gi|167659863|gb|EDS03993.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216] Length = 413 Score = 246 bits (627), Expect = 4e-63, Method: Compositional matrix adjust. Identities = 121/303 (39%), Positives = 189/303 (62%), Gaps = 2/303 (0%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + E+ + I+E +A+TP LI+P NP+ PI +Q IP EEL P + EDP+ Sbjct: 39 LTAEEEEGIRESLKTLRMAITPYYLTLIDPENPHCPIRKQAIPTVEELKRSPADLEDPLH 98 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 +++ SP+ G+ HRYPDR+L + +C +YCR C RR G Q K + + YI Sbjct: 99 EDSDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG-QHDCATPEKQIDDCIDYIA 157 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 Q+ +V+ +GGD L++S ++L+ ++ LR I HV+I+R SR P+V PQRI PEL+ Sbjct: 158 RTPQVRDVLLSGGDALLVSDEKLEYIISRLRAIPHVEIIRIGSRTPVVLPQRITPELVNM 217 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 LK+ P+++ H NHP E + E+ A +RLA+AGI L +QSVLL+G+ND I+ L+ Sbjct: 218 LKKY-HPIWLNTHFNHPNEVTPESKQACARLADAGIPLGNQSVLLRGVNDCTHIMKKLVH 276 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 V++R++PYY++ DL+ G HFR + +G +I+ +L+ SG P +++D PGG GK Sbjct: 277 ELVKMRVRPYYIYICDLSLGIGHFRTPVSKGIEIIENLRGHTSGYAVPTFVVDAPGGGGK 336 Query: 320 VKI 322 + + Sbjct: 337 IPV 339 >gi|189425162|ref|YP_001952339.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ] gi|189421421|gb|ACD95819.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ] Length = 341 Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 128/326 (39%), Positives = 195/326 (59%), Gaps = 10/326 (3%) Query: 12 QDLYNANLIKKEQIDE--IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69 Q + A L + + DE +K +++ Y ++ A LI P+DPI +Q +P EL + Sbjct: 4 QTVSLAELAHRFKFDETPLKPVADLYPYRISSYYAGLIT--APHDPIWQQCVPSLLEL-V 60 Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 E+ DP+ + SP+ G++HRYPDR +L + + C YCRFC R+ VG G S Sbjct: 61 DTEQHPDPLDEERLSPVPGLIHRYPDRAVLLVSNRCATYCRFCMRKRRVGCAGGQPALS- 119 Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 AAL YI Q+ ++I +GGDPL+LS L ++L LR I HV+++R SR+P+ P Sbjct: 120 ---AALEYIAATPQLRDIILSGGDPLMLSDDELHEILLALRRIPHVEVIRIGSRMPVTAP 176 Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 RI P + L E P+Y+ H NHP E + EA A LA+ G+ L +Q+VLLKG+ND Sbjct: 177 ARITPAFCRMLAEH-HPLYLNTHFNHPQELTSEAAQACRLLASVGVPLGNQTVLLKGVND 235 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309 D + L+ + L+++PYYLH DL GT+HFR +E G++++ +L+ KISG+ P + Sbjct: 236 DSPTMQALLTGLLRLQVRPYYLHQMDLVRGTAHFRTPLEHGRQLIGALRGKISGMAIPHF 295 Query: 310 ILDLPGGYGKVKIDTHNIKKVGNGSY 335 ++DLPGG GKV + ++ +VG + Sbjct: 296 VIDLPGGKGKVPVLPDSLTRVGEAVW 321 >gi|77919002|ref|YP_356817.1| hypothetical protein Pcar_1401 [Pelobacter carbinolicus DSM 2380] gi|77545085|gb|ABA88647.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380] Length = 457 Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 122/314 (38%), Positives = 193/314 (61%), Gaps = 3/314 (0%) Query: 35 YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93 + +++TP A+LI+P + NDP+ Q P EL + P E DP+ ++ SP+ GI HRY Sbjct: 84 FPLSITPYYASLIDPEDYQNDPVFIQSFPSPHELEVDPREMADPLAEDKDSPVPGITHRY 143 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 PDR+L + ++C +YCR C R+ VG Q ++ ++ + L YI E QI +V+ +GGD Sbjct: 144 PDRVLFHVSNLCAMYCRHCTRKRKVGDQD-SIPGREEIKQGLEYIAENPQIRDVLLSGGD 202 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+LS + L +L LR I HVQ++R +R+P+V P RI +L+ L++ PV++ H Sbjct: 203 PLMLSDEYLDWILTALRNIPHVQVIRIGTRMPVVLPYRITDDLVDMLRKH-HPVWVNTHF 261 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E + A AA+ +LA+AGI L +Q+VLL G+ND P I+ LM V+ R++PYYL+ Sbjct: 262 NHPRELTSSARAALRKLADAGIPLGNQTVLLAGVNDCPRIIKELMHRLVDNRVRPYYLYQ 321 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 DL+ G HFR + +G +I+ SL SG P Y++D PGG GK+ ++ + + + Sbjct: 322 CDLSEGLMHFRTPVGKGIEIMESLIGHTSGFAIPTYVVDAPGGGGKIPLNPNYLVSLSTN 381 Query: 334 SYCITDHHNIVHDY 347 + ++ ++ Y Sbjct: 382 KVILRNYEGVITTY 395 >gi|86158970|ref|YP_465755.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775481|gb|ABC82318.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C] Length = 375 Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust. Identities = 122/304 (40%), Positives = 181/304 (59%), Gaps = 2/304 (0%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + E+ + + + + +TP A L++P +P PI Q +P ELNIL + EDP+ Sbjct: 47 VTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQSVPTMGELNILASDLEDPLA 106 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + P+ GI HRYPDR+L H CPVYCR C R+ V S + + + E +LAYI Sbjct: 107 EERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKV-SDPTSAAAKRQIEESLAYIA 165 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + +I +V+ +GGDPL LS RL +L LR I HV+I R +R + PQR+ + + Sbjct: 166 QHPEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRLGTRNLVTLPQRVTDDFVYM 225 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 L+ PVY+ H NHP E + EA A RLA+AG ++ +Q VLLKG+NDDP ++ L Sbjct: 226 LRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQMVLLKGVNDDPAVVKELNH 284 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + +RI+PYY++ DLA G SHFR +E G +I+ +L+ SGL P +++D P G GK Sbjct: 285 KLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGHTSGLAVPQFVVDAPNGGGK 344 Query: 320 VKID 323 + ++ Sbjct: 345 IPVN 348 >gi|225181511|ref|ZP_03734953.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter alkaliphilus AHT 1] gi|225167759|gb|EEG76568.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter alkaliphilus AHT 1] Length = 423 Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust. Identities = 131/346 (37%), Positives = 202/346 (58%), Gaps = 3/346 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL+++ LT+ ++L + + + + + +A+TP A L+NP + N PI Q I Sbjct: 24 QLKNR-LTTVEELRQVVALTEAEERGVASCLDTLRMAITPYYAMLMNPEDSNCPIRLQAI 82 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EL E EDP+ ++ SP G+ HRYPDR+LL + C +YCR C RR M G+ Sbjct: 83 PTATELESGECEAEDPLFEDVDSPAPGLTHRYPDRVLLLITDQCSMYCRHCTRRRMAGTN 142 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 L D + AL YI+ I +V+ +GGD L++S L +L LR I+HV+I+R Sbjct: 143 D-QALPRSDVDKALDYIRNTPGIRDVLISGGDALLISDDYLDDILGKLRAIEHVEIIRIG 201 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +R P+V PQR+ PEL LK+ P++I H NHP E ++EA A+S LA+AGI L +QS Sbjct: 202 TRTPVVLPQRVTPELCNVLKKH-HPLFINTHFNHPTELTDEAKKAVSMLADAGIPLGNQS 260 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+GIND P + L + + RI+PYYL+ DL+ G HFR ++ +G +I+ L+ Sbjct: 261 VLLRGINDCPYLYKVLAQRLLMNRIRPYYLYQCDLSPGLEHFRTSVAKGIEIIEHLRGHT 320 Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P +++D PGG GK+ + + + + + ++ ++ Y Sbjct: 321 SGLAVPTFVVDAPGGGGKIPVSPQYMISMSDEKVILRNYEGVIAAY 366 >gi|158522524|ref|YP_001530394.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus oleovorans Hxd3] gi|158511350|gb|ABW68317.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus oleovorans Hxd3] Length = 358 Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 129/320 (40%), Positives = 191/320 (59%), Gaps = 5/320 (1%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 + Y +++ P +LI P DP+ RQ +P EL+ + +DP+ + SP+ G++ Sbjct: 44 VCRAYPMSVNPYYLSLI--QAPGDPLWRQVVPDARELSGTLTD-DDPLTETAQSPVPGLI 100 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 HRYPDR+++ + CPV CRFCFR+ + G + L+ +AA AY++ + EVIF+ Sbjct: 101 HRYPDRVVVLVSGRCPVVCRFCFRKRLAGRAAAS-LTDDQVDAAAAYVRAAPAVREVIFS 159 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+L +L L+ I HV+ LR H+R P+ PQRI +L+ LK+ P+Y+ Sbjct: 160 GGDPLMLEDDKLCAALEKFAAIGHVETLRIHTRTPVALPQRITGDLVVLLKKF-LPLYVN 218 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H NHP E + A AA +RLA+AGI L SQ+VLL GINDD + LMR + +R++PYY Sbjct: 219 VHVNHPREITAPAEAACARLADAGIPLGSQTVLLAGINDDAITMEALMRALLRIRVRPYY 278 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330 LHHPD+ GT HFR I G ++ SL ++ G+ P Y++DLPGG GKV + + Sbjct: 279 LHHPDVVKGTGHFRPPINRGLSVMRSLVGRVPGMAVPRYVIDLPGGGGKVPLLPDYVVSS 338 Query: 331 GNGSYCITDHHNIVHDYPPK 350 G + ++ V YP K Sbjct: 339 ETGHLVVKNYQGKVFVYPEK 358 >gi|253700443|ref|YP_003021632.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21] gi|251775293|gb|ACT17874.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21] Length = 344 Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 125/315 (39%), Positives = 188/315 (59%), Gaps = 10/315 (3%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TS ++L + + Q + + Y + +TP LI DPI RQ +P EL Sbjct: 12 ITSPEELSG---LFRLQGRDFSPVVERYPMRITPYYLGLIEEQG--DPIWRQCVPDPAEL 66 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 P + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG ++ Sbjct: 67 -CDPSQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGCAS---MA 122 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + A+AYI +I +V+ +GGDPL+L L +L L I HV+I+R SRVP+ Sbjct: 123 PARVDDAIAYIAGDQRIRDVVLSGGDPLLLPDDCLAGILSALSRIPHVEIVRIGSRVPVT 182 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P+RI P L + LK PVY+ H NHP E + ++ A +RLA+AG+ L +Q+VLLKG+ Sbjct: 183 LPERITPGLARLLKRH-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTVLLKGV 241 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 NDDP+ + +LMR + +R++PYY+H DL GT+HFR + +G ++ +L+ SGL P Sbjct: 242 NDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVAQGISVMQALRGHTSGLAVP 301 Query: 308 FYILDLPGGYGKVKI 322 Y++DLPGG GKV + Sbjct: 302 HYVIDLPGGKGKVDV 316 >gi|312126722|ref|YP_003991596.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor hydrothermalis 108] gi|311776741|gb|ADQ06227.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor hydrothermalis 108] Length = 409 Score = 245 bits (625), Expect = 7e-63, Method: Compositional matrix adjust. Identities = 130/325 (40%), Positives = 208/325 (64%), Gaps = 11/325 (3%) Query: 1 MQLRHKTLTSAQ---DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIA 57 QL+++ +TSA+ DL N + + +QI+++ +I Y A++P +LI+P++PN PI Sbjct: 63 WQLKNR-ITSAKILKDLLNLDEKEAQQIEQVGKI---YRFAISPYYLSLIDPNDPNCPIK 118 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ +P EL + + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR Sbjct: 119 RQSVPSSLEL--VEKGDLDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRF 176 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 +G + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I Sbjct: 177 IG-ETDTHASLDDITDAIEYVAQNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEI 235 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+ PQRI +L+ LK+ P+YI H NHP E ++E+ A LA++GI L Sbjct: 236 IRIGTRAPVTLPQRITKDLVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPL 294 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL Sbjct: 295 GNQMVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESL 354 Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322 + + SG+ P YI++ P G GK I Sbjct: 355 RGRTSGMAVPTYIINAPKGKGKTPI 379 >gi|325972392|ref|YP_004248583.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy] gi|324027630|gb|ADY14389.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy] Length = 421 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 121/322 (37%), Positives = 196/322 (60%), Gaps = 4/322 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H+ +T+ DL + + + +K + ++TP +LI+P++P + R Sbjct: 70 WQLFHR-ITTYADLCRFLTPTESEREALKSADTLFPFSVTPYYLSLIDPNDPTSALRRTV 128 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EE + E DP+ + + + ++G+VHRYPDR+L C YCR+C R MVG Sbjct: 129 IPSIEESYVGKGESADPLAEEHTTAVQGLVHRYPDRVLFLTTSFCSTYCRYCTRSRMVGG 188 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T K E A+ YI+E +++ +V+ +GGDPL LS + + +L + I HV+++R Sbjct: 189 H--TEALQKHWEGAINYIKEHTEVRDVVISGGDPLTLSDEMIDYLLDQVTSIDHVEMVRI 246 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 ++VP+V PQRIN L+ L++ KP+Y++IHA HP E ++E++ A + LA++G++L SQ Sbjct: 247 GTKVPMVMPQRINESLLAILRKY-KPIYMSIHATHPDELTKESVRACNALADSGVVLGSQ 305 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+ND +L +L + R+KPYYL D +G+ HFR T+++G+ ++ L+ Sbjct: 306 TVLLKGVNDSVSVLTDLFHKLLRARVKPYYLFQCDPISGSEHFRTTVDKGKALMQGLRGF 365 Query: 301 ISGLCQPFYILDLPGGYGKVKI 322 SG P Y++D PGG GKV I Sbjct: 366 TSGYAIPQYVIDTPGGGGKVPI 387 >gi|118579512|ref|YP_900762.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus DSM 2379] gi|118502222|gb|ABK98704.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379] Length = 440 Score = 245 bits (625), Expect = 8e-63, Method: Compositional matrix adjust. Identities = 130/350 (37%), Positives = 204/350 (58%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 QLRH + + + + L E+ E++E + + +++TP +LI+ N DP+ Sbjct: 29 WQLRHAIRDIATFERLLGIKF-DAERKRELEETIDKFPLSITPYYLSLIDRTNYAVDPVF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ P +EL + E EDP+ ++ SP+ GI HRYPDR+L ++ ++C +YCR C R+ Sbjct: 88 RQAFPSPDELQVTSCEHEDPLHEDADSPVPGITHRYPDRVLFQVSNICSMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG ++ + L YI+ + +V+ +GGDPL+L L +L+ LR I HVQ+ Sbjct: 148 VGDVD-SIPGKDEIMLGLEYIRRTPVVRDVLLSGGDPLMLPDSHLDWILRELRAIPHVQV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR+P+V P RI P LI+ L P+++ H NHP E + A A+SRLANAGI L Sbjct: 207 IRIGSRMPVVLPYRITPGLIRVLSRY-HPLWLNTHFNHPREITTSAREALSRLANAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND P I+ LM+ VE R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 266 GNQTVLLAGVNDCPMIIKTLMQRLVENRVRPYYLYQCDLSEGLSHFRTPVGKGMEIMESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + + + ++ ++ Y Sbjct: 326 VGHTSGFAVPTYVIDAPGGGGKIPVMPNYLITLATNKVVLRNYEGVITTY 375 >gi|307298172|ref|ZP_07577976.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306916258|gb|EFN46641.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 422 Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust. Identities = 118/303 (38%), Positives = 188/303 (62%), Gaps = 2/303 (0%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 I +E+ + E +++TP A L++P+N PI RQ +P +EL I + DP+ Sbjct: 41 ITEEEAHGVAECLRTLRMSITPYYATLMDPNNQRCPIRRQAVPTDKELKIDKWDMIDPLH 100 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 ++ SP+ G+ HRYPDR+L + C +YCR C RR G Q + K+ + A+ YI+ Sbjct: 101 EDEDSPVPGLTHRYPDRVLFLITDQCSMYCRHCTRRRFAG-QLDRARTRKEIDDAIEYIR 159 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 E ++ +V+ +GGD L++ L+ +L LR I HV+I+R +R P+V PQR+ PEL++ Sbjct: 160 ETPEVRDVLLSGGDALLVGDDYLEYILNELREIPHVEIIRIGTRTPVVLPQRVTPELVKM 219 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 +++ PV+I H NHP E + ++ A LA+ GI L +QSVLL+G+ND P I+ L+ Sbjct: 220 IRKY-HPVWINTHFNHPLEITPDSTRACEMLADGGIPLGNQSVLLRGVNDSPYIMMELVH 278 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 V++R++PYY++ DL+ G HFR +I +G I+ SL SGLC P +++D PGG GK Sbjct: 279 QLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIGIMESLIGNTSGLCVPTFVVDAPGGGGK 338 Query: 320 VKI 322 +++ Sbjct: 339 IRV 341 >gi|223940704|ref|ZP_03632543.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514] gi|223890631|gb|EEF57153.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514] Length = 412 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 123/313 (39%), Positives = 189/313 (60%), Gaps = 2/313 (0%) Query: 36 SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95 ++A+TP NLI+P + N PI Q IP+ +E + E +DP G+++HSP+ G+VHRYPD Sbjct: 81 ALAITPYFFNLIDPADENCPIRTQVIPKVQETHTASWEMDDPCGEDSHSPVPGLVHRYPD 140 Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R+L + C YCR+C R +V + G + E + YI++ + +V+ +GGDPL Sbjct: 141 RVLFLVTDRCASYCRYCTRSRLVSNAAGYDFHP-EFEKQIEYIRKTPTVRDVLLSGGDPL 199 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 +LS +L+ +L LR I HV+ LR +R+PI PQRI P L LK+ P++I+IH NH Sbjct: 200 LLSDDKLEYLLSQLRAIPHVEFLRIGTRIPIFLPQRITPALCAMLKKY-HPLFISIHTNH 258 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275 P E + E A+ RLA AGI L +QSVLL+ +NDD + L++ + R+KPYYL+ D Sbjct: 259 PRELTTEVREALGRLAEAGIPLGNQSVLLRHVNDDLTTMRALVQKLLMCRVKPYYLYQCD 318 Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335 L AG++H R ++ +G +I+ L+ +G P Y++D PGG GKV ++ + Sbjct: 319 LIAGSAHLRSSVRKGLEIMEGLRGHTTGYAIPQYVIDAPGGGGKVPVNPEYVLSRNADRV 378 Query: 336 CITDHHNIVHDYP 348 I + + +YP Sbjct: 379 VIRNFEGKIFEYP 391 >gi|326203071|ref|ZP_08192937.1| lysine 2,3-aminomutase YodO family protein [Clostridium papyrosolvens DSM 2782] gi|325986717|gb|EGD47547.1| lysine 2,3-aminomutase YodO family protein [Clostridium papyrosolvens DSM 2782] Length = 425 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 130/344 (37%), Positives = 198/344 (57%), Gaps = 5/344 (1%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R T+T + + N + E+I I++ +A+TP L+NP +P PI +Q +P Sbjct: 29 RITTITQLEQVVNLTV---EEIRGIEKCLKKLRMAITPYYVTLMNPEDPACPIRKQAVPT 85 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 E I + DP+ + SP+ G+ HRYPDR LL + C +YCR C RR G+ Sbjct: 86 INETYISTCDSSDPLHEGIDSPVNGLTHRYPDRALLLVTDQCSMYCRHCTRRRFAGNDDK 145 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 LS + A+ YI+ QI +VI +GGD L +S++RL+ +LK+L+ I HV+++R +R Sbjct: 146 E-LSITNVNKAIEYIKNTKQIRDVILSGGDALCISNERLEYILKSLKAINHVEVIRIGTR 204 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+V PQRI PEL LK+ P++I NHP E + EAI A L++AGI L +QSVL Sbjct: 205 VPVVMPQRITPELCNMLKKY-HPLWINTQFNHPNELTPEAIKACEMLSDAGIPLGNQSVL 263 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L IND P I+ NL++ V+ R++PYYL+ DL+ G HFR + G +I+ L+ SG Sbjct: 264 LSNINDCPYIMKNLVQGLVKSRVRPYYLYQCDLSEGIEHFRTPVTVGVEIIEMLRGHTSG 323 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P +++D PGG GK+ ++ + N + + ++ Y Sbjct: 324 FAVPTFVIDAPGGGGKIPVNPQYLLSQSNDKVILRNFEGVICSY 367 >gi|95930512|ref|ZP_01313247.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] gi|95133347|gb|EAT15011.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] Length = 437 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 121/322 (37%), Positives = 196/322 (60%), Gaps = 3/322 (0%) Query: 27 EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85 +I++ + + +++TP +LIN + NDP+ RQ P EEL +L + DP+ ++ SP Sbjct: 57 KIEQTVDTFPLSITPYYLSLINTDDYANDPVFRQAFPVPEELQVLDHDMADPLAEDQDSP 116 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 GI HRYPDR+L + ++C +YCR C R+ VG Q TV ++ EA L YI+ + Sbjct: 117 APGITHRYPDRVLFHISNICSMYCRHCTRKRKVGDQD-TVPGREEIEAGLEYIRNNPVVR 175 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +V+ +GGDPL+LS L +L L I+HVQ++R +R+P+V P RI +L+ LK+ Sbjct: 176 DVLLSGGDPLMLSDDHLDWILTELDQIEHVQVVRLGTRMPVVLPYRITDDLVAVLKKH-H 234 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 P+++ H NHP E + + A+ +LA+AGI L +QSVLL G+ND P I+ L+ V R Sbjct: 235 PIWVNTHFNHPREMTTSSKEAVRKLADAGIPLGNQSVLLAGVNDCPRIMKALVHKLVANR 294 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++PYYL+ DL+ G +HFR + +G +I+ SL+ SG P Y++D PGG GK+ ++ + Sbjct: 295 VRPYYLYQCDLSEGLNHFRTPVGKGIEIMESLRGHTSGFSVPTYVVDAPGGGGKIPLNPN 354 Query: 326 NIKKVGNGSYCITDHHNIVHDY 347 + + + ++ ++ Y Sbjct: 355 YLVSLSTNKVVLRNYEGVITTY 376 >gi|146295299|ref|YP_001179070.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145408875|gb|ABP65879.1| glutamate 2,3-aminomutase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 407 Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 129/346 (37%), Positives = 212/346 (61%), Gaps = 5/346 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +P+ PI +Q Sbjct: 63 WQLKNR-ITSAKILKELLNLDEKEAQQIEEVAKIYRFAISPYYLSLIDPSDPHCPIKKQS 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL + + DP+ + + SP K I RYPDR+++K+ ++C ++CRFC RR ++G Sbjct: 122 VPSSFEL--IEKGELDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQRI EL+ LK+ P+Y+ H NHP E ++E+ A LA+ GI L +Q Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYVNTHFNHPREITKESKRACEMLADGGIPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ + Sbjct: 298 MVLLNGVNNDKYVVRRLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 SG+ P YI++ P G GK I + + G G + V + Sbjct: 358 TSGMAIPTYIINAPKGKGKTPIMPNYLLYFGKGKVVFRNWEGEVFE 403 >gi|222055869|ref|YP_002538231.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32] gi|221565158|gb|ACM21130.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32] Length = 347 Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 130/321 (40%), Positives = 193/321 (60%), Gaps = 16/321 (4%) Query: 6 KTLTSAQD----LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 KT +A D L+N + ++I +++ Y + +T LI P D I RQ I Sbjct: 9 KTCVTAPDELSPLFNLD------TEDIAQVAKRYPMRITRYYLGLIE--RPGDAIWRQCI 60 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E + EDP+ + SP+ G++HRYPDR++ + VC VYCRFC R+ VG Sbjct: 61 PDPLEFED-QAQMEDPLDEELLSPVPGLIHRYPDRVVWLVSSVCAVYCRFCMRKRRVGCT 119 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + T ++ +A LAYI +I +VI +GGDP +L L+++L LR I HV+I+R Sbjct: 120 EATETGTR--QAVLAYIANHPEIRDVILSGGDPFLLEDDVLEEILSGLRQIHHVEIIRIG 177 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +R + P+RI L + LK+ P+Y+ H NHP E + + A +RLA+AGI L +Q+ Sbjct: 178 TRTTVTLPERITTGLCRMLKKF-HPIYVNTHFNHPKEITAASARACARLADAGIPLGNQT 236 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKGINDDP+++ LM+ +++R+KPYYLH DL GT+HFR +I+ G +I+ L+ Sbjct: 237 VLLKGINDDPQVMKRLMQLLLKIRVKPYYLHQMDLVRGTAHFRTSIDRGLQIMEGLRGHT 296 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 SGL P+Y +DL GG GKV + Sbjct: 297 SGLASPYYAIDLEGGKGKVPL 317 >gi|222530236|ref|YP_002574118.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor bescii DSM 6725] gi|222457083|gb|ACM61345.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor bescii DSM 6725] Length = 407 Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 125/324 (38%), Positives = 207/324 (63%), Gaps = 9/324 (2%) Query: 1 MQLRHKTLTSA--QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 QL+++ ++ +DL N + + +QI+++ +I Y A++P +LI+P++PN PI + Sbjct: 63 WQLKNRIASAKILKDLLNLDEKEAQQIEQVGKI---YRFAISPYYLSLIDPNDPNCPIKK 119 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q +P EL + + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++ Sbjct: 120 QSVPSSLEL--IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLI 177 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+ Sbjct: 178 G-ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLEWILRSLRQIPHVEII 236 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R +R P+ PQRI EL+ LK+ P+YI H NHP E ++++ A L++AG+ L Sbjct: 237 RIGTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKDSKRACEMLSDAGVPLG 295 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ Sbjct: 296 NQMVLLNGVNNDMYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLR 355 Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322 + SG+ P YI++ P G GK I Sbjct: 356 GRTSGMAVPTYIINAPKGKGKTPI 379 >gi|153004182|ref|YP_001378507.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. Fw109-5] gi|152027755|gb|ABS25523.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. Fw109-5] Length = 413 Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 121/294 (41%), Positives = 177/294 (60%), Gaps = 2/294 (0%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 E + + +TP A L++P +P+ PI Q +P EL I P + EDP+ + P+ GI Sbjct: 95 ESDAEFHMGITPYYAALMDPDDPSCPIRLQSVPTMGELTIAPADLEDPLAEERDMPVPGI 154 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 HRYPDR+L H CPVYCR C R+ V S + + + E +LAYI +I +V+ Sbjct: 155 THRYPDRVLFYTTHNCPVYCRHCTRKRKV-SDPTSAAAKRQIEESLAYISAHPEIRDVVI 213 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL LS +RL +L LR I HV+I R +R + PQR+ + + L+ PVY+ Sbjct: 214 SGGDPLSLSDERLDYILGRLRAIPHVEIFRLGTRNLVTLPQRVTDDFVHMLRRH-HPVYV 272 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 H NHP E + EA A RLA+AG ++ +Q VLLKG+ND+PE++ L + +RI+PY Sbjct: 273 NTHFNHPKECTAEAFEAARRLADAGCVIGNQMVLLKGVNDEPELVKELNHKLLLMRIRPY 332 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 Y++ DLA G SHFR +E G +I+ L+ SGL P +++D P G GK+ ++ Sbjct: 333 YIYQCDLAKGISHFRTPVETGIRIIEHLRGHTSGLAVPHFVVDAPQGGGKIPVN 386 >gi|194333635|ref|YP_002015495.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris aestuarii DSM 271] gi|194311453|gb|ACF45848.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris aestuarii DSM 271] Length = 437 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 127/325 (39%), Positives = 196/325 (60%), Gaps = 6/325 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+R+ + L + + L N L +Q + E + +++TP +LIN + NDP+ Sbjct: 28 WQMRNSIRDLDTFETLLNITL-SPDQRNVFNETVKKFPMSITPYYLSLINTSDMENDPVF 86 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ +P EL+I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+ Sbjct: 87 RQSVPSHHELDIMKGDMADPLHEDQDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG Q T+ + + YI+ I +V+ +GGDP +L L +L+ LR I+HV+I Sbjct: 147 VGDQD-TIPTKTSISKGIDYIRSNPAIRDVLLSGGDPFLLPDDYLDWILEELRKIEHVEI 205 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V P RI PEL+Q L++ +PV++ H NH E ++ A A+S LA+ GI L Sbjct: 206 IRIGTRTPVVLPYRITPELVQILRKH-QPVWVNTHFNHSREMTQSARNALSMLADGGIPL 264 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL GIND P I+ L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 265 GNQTVLLSGINDCPRIMKALVHQLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324 Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322 SG C P Y++D PGG GK+ + Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPV 349 >gi|169830385|ref|YP_001716367.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis audaxviator MP104C] gi|169637229|gb|ACA58735.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis audaxviator MP104C] Length = 420 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 129/315 (40%), Positives = 195/315 (61%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +T+ +L N + E+ ++ +A+TP A+L++P NP DPI +Q +P EL Sbjct: 30 VTTVDELRNLINLTPEEEQGVRRCLETLRMAITPYYASLMDPDNPEDPIRKQAVPLAAEL 89 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 E DP+ + SP+ GI HRYPDR+LL L C +YCR C RR + G + L Sbjct: 90 QFGLAESRDPLAEEVDSPVPGITHRYPDRVLLLLTDQCAMYCRHCTRRRLAG-KTDRALP 148 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 +AAL YI++ + I +V+ +GGD L+L+ RL +L++LR I HV+I+R +R P+V Sbjct: 149 PARIKAALEYIRKTTAIRDVLLSGGDSLLLAEDRLGGILESLRAIDHVEIIRIGTRTPVV 208 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI PEL L+ PVY+ +H NHP E + EA A LA+AG+ L +Q+VLL+G+ Sbjct: 209 LPQRITPELCALLRRF-HPVYVNMHFNHPKEVTPEAAEACRMLADAGLPLANQTVLLRGV 267 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND P ++ +LM + + +R++PYYL+ DL+ G HFR T+ +G +I+ L+ SGL P Sbjct: 268 NDCPYVIKDLMHSLLRIRVRPYYLYQCDLSPGLEHFRTTVAQGIEIIELLRGHTSGLAVP 327 Query: 308 FYILDLPGGYGKVKI 322 Y++D PGG GK+ + Sbjct: 328 TYVVDAPGGGGKIPV 342 >gi|308273444|emb|CBX30046.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.] Length = 359 Score = 243 bits (621), Expect = 2e-62, Method: Compositional matrix adjust. Identities = 135/348 (38%), Positives = 206/348 (59%), Gaps = 15/348 (4%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L ++T ++L + K +ID I E +Y + + P +LI + N PI +Q +P Sbjct: 22 LLQNSITKPEELIRILPVDKSKIDRIIE---YYPMRINPYYFSLIK--HKNCPIGKQAVP 76 Query: 63 ---QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + E++NIL + DP+ + SP+ ++HRYP R+L + C +YCRFC R+ VG Sbjct: 77 DMQEIEDINILSDP--DPLCEEIQSPVPNLIHRYPGRVLFMVSAECAMYCRFCMRKRKVG 134 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 ++ K L YI+ I EV+ +GGDPL+L +++ ++LK LR I H++ILR Sbjct: 135 YNS---ITDKTITMGLEYIKNNKSICEVVISGGDPLLLEDEKIDRILKDLRAIDHIEILR 191 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+P PQRI +L+ L++ P++I IH NHP E +EEA A S LA+AGI L Sbjct: 192 IHSRIPCTLPQRITKDLVDILRQY-HPLFINIHFNHPDEITEEAALACSALADAGIPLGC 250 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL GIN++ EI+ LM+ + +R+KPYY+H D+ G HF+ T++EG I+ SL Sbjct: 251 QTVLLNGINNNAEIMKTLMKKLLMIRVKPYYIHQLDVVRGNHHFKATVKEGLNIMQSLY- 309 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGLC P Y++DLPGG GKV + K + S ++ + + +Y Sbjct: 310 GYSGLCVPQYMIDLPGGGGKVPLLPQYFKTFSDDSISFINYEDKLFEY 357 >gi|262197122|ref|YP_003268331.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum DSM 14365] gi|262080469|gb|ACY16438.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum DSM 14365] Length = 419 Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 120/313 (38%), Positives = 186/313 (59%), Gaps = 3/313 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 LT+A++ + E+ + + + + TP A+L++P + PI +Q IP + EL Sbjct: 44 LTTAEEFARVVELSDEERAALVDTAPMFRTGATPYYASLMDPARADCPIRKQAIPSRREL 103 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + PEE DP+G+++ SP +VH+YPDR+LL +L C +YCR C RR +VG + Sbjct: 104 DFAPEELRDPLGEDSQSPAPCVVHKYPDRVLLLVLDRCAIYCRHCNRRRLVGGDAPP--A 161 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 D +A + YI QI +V+ +GGDPL+LS+ RL +L LR I+HV+I+R +R+P+V Sbjct: 162 RDDIDAGIDYIARTPQIRDVLLSGGDPLLLSNARLAHILGRLRAIEHVEIIRIGTRLPVV 221 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P RI+ EL L+ P+YI H NHP E + EA AA RL ++GI + +Q+VLL+G+ Sbjct: 222 LPMRIDDELCATLRRF-HPLYINTHFNHPKEITSEARAACERLVDSGIPVGNQAVLLRGV 280 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 N + LMR + +R++PYYL D GT H R ++ ++ L+ SG+ P Sbjct: 281 NSSVRCIRALMRALLRMRVRPYYLFQGDTVLGTDHMRTPVDAAIALMEGLRGWTSGMAIP 340 Query: 308 FYILDLPGGYGKV 320 ++D PGG GK+ Sbjct: 341 HMVIDAPGGGGKL 353 >gi|158319469|ref|YP_001511976.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii OhILAs] gi|158139668|gb|ABW17980.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii OhILAs] Length = 416 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 119/315 (37%), Positives = 197/315 (62%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +T+ +DL + E+ IKE + +TP A+L++ +PN P+ +Q +P EL Sbjct: 29 ITNVEDLKKVINLTDEEEKGIKECLKTLRMGITPYYASLMDKDDPNCPVRKQAVPIMTEL 88 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + + +DP+ ++ SP+ G+ HRYP+R+LL + +C +YCR C RR G Q T + Sbjct: 89 HKSDADMDDPLHEDADSPVPGLTHRYPNRVLLLITDMCSMYCRHCTRRRFAG-QNDTAMP 147 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 +AA+ YI+ ++ +V+ +GGD L++S ++L+ ++ LR I+HV+I+R SR P+V Sbjct: 148 MDRIDAAIEYIRRTPEVRDVLLSGGDCLLVSDEKLEYIISKLREIEHVEIIRLGSRTPVV 207 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI PEL+ LK+ P+++ H NHP E +EE A++ LA+AGI L +QSVLL+G+ Sbjct: 208 MPQRITPELVGMLKKY-HPIWLNTHFNHPKELTEETKRALTLLADAGIPLGNQSVLLRGV 266 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND I+ +L+ V+ R++PYY++ DL+ G HFR + +G +I+ L+ SG P Sbjct: 267 NDCVHIMRDLVHGLVKNRVRPYYIYQCDLSMGIEHFRTPVSKGIEIIEGLRGHTSGYAVP 326 Query: 308 FYILDLPGGYGKVKI 322 +++D PGG GK+ + Sbjct: 327 TFVVDAPGGGGKIPV 341 >gi|320334582|ref|YP_004171293.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211] gi|319755871|gb|ADV67628.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211] Length = 473 Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 119/313 (38%), Positives = 182/313 (58%), Gaps = 2/313 (0%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 + + +TP A+L++P +P P+ RQ IP EL ED + ++ HSP+ G+VHRYP Sbjct: 69 FRLDITPYFASLMDPEDPTCPVRRQVIPTHHELENFTSMMEDSLAEDKHSPVPGLVHRYP 128 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 DR+L+ + C YCR+C R +VG T + + L Y++ Q+ +V+ +GGDP Sbjct: 129 DRVLMLVTTQCASYCRYCTRSRIVGDPTET-FKPDEYKLQLEYLRNTPQVRDVLLSGGDP 187 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L L+ K L +L LR I H++I+R +RVP+ P R+ EL L E PV++ IH N Sbjct: 188 LTLAPKVLGGLLAELRKIPHIEIIRIGTRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVN 246 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 HP E + E A RL AG+ L +Q+VLL+G+ND P I+ LMR V++R++PYY++ Sbjct: 247 HPKEITPEVAEACDRLTRAGVPLGNQAVLLRGVNDHPVIMQKLMRELVKIRVRPYYIYQC 306 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334 DL G H R T+ +G +I+ SL+ SG P Y++D PGG GK+ + + + G G Sbjct: 307 DLVHGAGHLRTTVAKGLEIMESLRGHTSGYSIPTYVVDAPGGGGKIPVMPNYVLAQGGGK 366 Query: 335 YCITDHHNIVHDY 347 + + + Y Sbjct: 367 VILRNFEGYIAAY 379 >gi|51246011|ref|YP_065895.1| L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54] gi|50877048|emb|CAG36888.1| probable L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54] Length = 439 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 124/322 (38%), Positives = 194/322 (60%), Gaps = 3/322 (0%) Query: 27 EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85 +IKE + +++TP +LIN + NDPI Q P +EL+I P + EDP+ ++ SP Sbjct: 57 KIKETLRKFPLSITPYYLSLINSEDYSNDPIFIQSFPSPKELDISPHDMEDPLAEDKDSP 116 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 + I HRYPDR+LL++ + C +YCR C R+ VG L ++ + YI++ I Sbjct: 117 VPNITHRYPDRVLLQVSNTCAMYCRHCTRKRKVGDVDSIPLK-QEILNGIEYIRQTPVIR 175 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +V+ +GGDPL+LS L +L LR I HVQ++R SR+P+V P R+ L+ LK+ Sbjct: 176 DVLLSGGDPLMLSDDYLDWILSELRTIPHVQVIRIGSRMPVVLPYRVTDSLVAMLKKH-H 234 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 P+++ H NHP E + A+++LANAGI L +QSVLL G+ND P I+ +L+ VE R Sbjct: 235 PLWVNTHFNHPREVTASTREALAKLANAGIPLGNQSVLLAGVNDCPRIMKSLVHKLVENR 294 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++PYYL+ DLA G +HFR + +G +I+ SL+ SG P Y++D PGG GK+ ++ + Sbjct: 295 VRPYYLYQCDLAEGLNHFRTPVGKGIEILESLRGHTSGFAVPTYVVDAPGGGGKIPLNPN 354 Query: 326 NIKKVGNGSYCITDHHNIVHDY 347 + + ++ ++ Y Sbjct: 355 YLVSFSTNKVILRNYEGVITTY 376 >gi|150392234|ref|YP_001322283.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus metalliredigens QYMF] gi|149952096|gb|ABR50624.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus metalliredigens QYMF] Length = 414 Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust. Identities = 124/341 (36%), Positives = 204/341 (59%), Gaps = 4/341 (1%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + + +DL + ++ + I+E + +TP A+L++ + N P+ Q +P EL Sbjct: 29 IATVEDLKKVIDLTSQEEEAIEECLQTLRMGITPYYASLMDKEDSNCPVRMQAVPIMSEL 88 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-KGTVL 126 ++ + +DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G Q G L Sbjct: 89 SMGSADMDDPLHEDVDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQQDSGMPL 148 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 D AA+ YI + QI +V+ +GGD L+ S +RL+ ++ LR I+HV+I+R SRVP+ Sbjct: 149 DRID--AAIDYIAKTPQIRDVLLSGGDCLLASDERLEYIISKLRAIEHVEIIRLGSRVPV 206 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI P L+ LK+ P+++ H NH E ++E+ AI LANAGI L +QSVLLKG Sbjct: 207 VMPQRITPSLVNMLKKY-HPIWLNTHFNHSKEITKESKEAIELLANAGIPLGNQSVLLKG 265 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND I+ +L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 266 VNDCVHIMRDLVHDMVKMRVRPYYIYQCDLSRGIEHFRTPVAKGIEIIEGLRGHTSGYAV 325 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P +++D PGG GK+ + + + N + ++ ++ Y Sbjct: 326 PTFVVDAPGGGGKIPVMPNYVLSQSNNKVVLRNYEGVITTY 366 >gi|294101198|ref|YP_003553056.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium colombiense DSM 12261] gi|293616178|gb|ADE56332.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium colombiense DSM 12261] Length = 433 Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust. Identities = 128/315 (40%), Positives = 194/315 (61%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +T A+ L + K ++ IK N +A+TP A+LIN ++P+ PI +Q IP +E Sbjct: 34 ITEAKHLEQVVDLTKSELAMIKRSLNVLRMAITPYFASLINRNDPSCPIRKQCIPTLQET 93 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 I+ ++ DP+ + SP+ G+ HRYPDR LL + C +YCR C RR G Q S Sbjct: 94 LIVQSDQLDPLHEEVDSPVPGLTHRYPDRCLLLVTDQCSMYCRHCTRRRFAG-QTDLPRS 152 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 K+ EA + YI++ I +V+ +GGDPL LS R++ +L+ +R I HV+I+R +RVP+V Sbjct: 153 EKEIEACIDYIRKTPVIRDVLISGGDPLTLSDDRIEGILREIRAIPHVEIIRIGTRVPVV 212 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P RI L LK+ P+++ + NHP E + E+ A +LANAGI L +QSVLLKGI Sbjct: 213 MPMRITDNLCSMLKKY-HPLWMNLQFNHPREITPESADACQKLANAGIPLGNQSVLLKGI 271 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND P I L + +++R++PYY++ DL+ G HFR +I +G +I+ L+ SGL P Sbjct: 272 NDCPYIFRELNQQLLKIRVRPYYIYQCDLSQGIEHFRTSIGKGVEIMEFLRGHTSGLAVP 331 Query: 308 FYILDLPGGYGKVKI 322 +++D PGG GK+ + Sbjct: 332 TFVVDAPGGGGKIPV 346 >gi|309389800|gb|ADO77680.1| L-lysine 2,3-aminomutase [Halanaerobium praevalens DSM 2228] Length = 419 Score = 241 bits (616), Expect = 9e-62, Method: Compositional matrix adjust. Identities = 111/288 (38%), Positives = 182/288 (63%), Gaps = 2/288 (0%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 + + +TP A L++ + N P+ Q +P E ++ + EDP+ ++ SP+ GI HRYP Sbjct: 61 FRMGITPYYATLMDADDHNCPVRMQAVPDIMETHLSGSDMEDPLHEDGDSPVDGITHRYP 120 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 DR+L + C +YCR C RR G Q + + + + L Y++ Q+ +V+ +GGD Sbjct: 121 DRVLFLITDQCSMYCRHCTRRRFAG-QNDSGVPMERIDKCLEYVRNTPQVRDVLLSGGDC 179 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L++S +L+ ++K L I HV+++R SR P+V PQRI +L+ LK+ P+++ H N Sbjct: 180 LLISDDKLEYIIKELSEIDHVEVIRLGSRTPVVMPQRITDDLVNMLKKY-HPIWLNTHFN 238 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 HP E ++EA A ++LANAGI L +QSVL++GIND E++ +L++ V++R++PYY++ Sbjct: 239 HPKEITKEAAEACAKLANAGIPLGNQSVLMRGINDSSEVMMDLVQKLVQIRVRPYYIYQC 298 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 DL+ G HFR + +G +I+ SL+ SG C P Y++D PGG GK + Sbjct: 299 DLSMGIEHFRTKVSKGLEIMESLRGHTSGYCVPTYVIDAPGGGGKTPV 346 >gi|258513921|ref|YP_003190143.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum acetoxidans DSM 771] gi|257777626|gb|ACV61520.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum acetoxidans DSM 771] Length = 427 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 127/322 (39%), Positives = 198/322 (61%), Gaps = 3/322 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLR++ ++S + ANL E+ I++ + + +A+TP A+LIN + PI Q Sbjct: 21 WQLRNRIMSSDELDQYANLSVYEKA-SIQKAIDVFPMAITPYYASLINKDDSTCPIRMQC 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +EL + +DP+ ++ SP G+ HRYPDR+LL + + C +YCR C R+ VG Sbjct: 80 IPNPKELIKGSGDMDDPLHEDGDSPCPGLTHRYPDRVLLLVTNECSMYCRHCTRKRKVGD 139 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + V D A+ YI+ I +V+ +GGDP +LS RL+++++ +R I HVQ++R Sbjct: 140 NE-KVSKDSDIIKAIEYIKAHPDIRDVLLSGGDPFVLSTNRLEQIIRRVREIPHVQVIRI 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L++ LK+ P++I H NHP EF+EE+ A+++LA+AGI L +Q Sbjct: 199 GTRTPVVMPQRITDHLVKMLKKY-HPIWINTHFNHPREFTEESARALAKLADAGIPLGNQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGIND I+ L V R++PYYL+ DL+ G HFR + +G +I+ +L Sbjct: 258 TVLLKGINDCAFIIKKLAHLLVSNRVRPYYLYQCDLSRGIEHFRTPVSKGVEIMEALIGH 317 Query: 301 ISGLCQPFYILDLPGGYGKVKI 322 SG P +++D PGG GK+ + Sbjct: 318 TSGFAVPTFVVDAPGGGGKIPV 339 >gi|189500579|ref|YP_001960049.1| lysine 2,3-aminomutase YodO family protein [Chlorobium phaeobacteroides BS1] gi|189496020|gb|ACE04568.1| lysine 2,3-aminomutase YodO family protein [Chlorobium phaeobacteroides BS1] Length = 437 Score = 241 bits (614), Expect = 1e-61, Method: Compositional matrix adjust. Identities = 128/350 (36%), Positives = 205/350 (58%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+RH K L + + L + L +K++ + + + I++TP +LIN + NDP+ Sbjct: 28 WQMRHSIKDLETFEALLDVKLSEKQR-KAFGKAAEKFPISITPYYLSLINTEDMENDPVF 86 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q +P ELNI+ + DP+ +++ SP + HRYPDR+LL + +VCP+YCR C R+ Sbjct: 87 LQSVPSPLELNIVKGDMSDPLHEDSDSPAPCVTHRYPDRVLLLVSNVCPMYCRHCTRKRK 146 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + T+ E + YI+ QI +V+ +GGDP +LS L +L LR I+HV+I Sbjct: 147 VGDED-TIPKRSAIEQGIRYIRNNPQIRDVLLSGGDPFLLSDDYLDWILSELRKIEHVEI 205 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V P RI +L+ LK+ +PV++ H NH E ++ A A+ LA+ G+ L Sbjct: 206 IRIGTRTPVVLPCRITSDLVAILKKH-QPVWVNTHFNHSREITQSARNALGMLADGGVPL 264 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL GIND P I+ L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P Y++D PGG GK+ + + + + ++ ++ Y Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTY 374 >gi|159906176|ref|YP_001549838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C6] gi|159887669|gb|ABX02606.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C6] Length = 433 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 128/343 (37%), Positives = 209/343 (60%), Gaps = 4/343 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIARQFIPQK 64 K + + + NL + E+ EI++ + +++TP A+LI+ N + DPI +Q + Sbjct: 37 KDVDTLEKFLGINLDEGEK-REIQKAIEVFPMSITPYYASLIDTENLDKDPIYKQSVASS 95 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 +EL + E EDP+ +++ SP+ GI HRYPDR+L + C +YCR C R+ V S+K + Sbjct: 96 KELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPSCAMYCRHCTRKRKV-SEKSS 154 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV+++R SRV Sbjct: 155 NPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVELIRIGSRV 214 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+NAGI L +Q+VLL Sbjct: 215 PVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVELTKESKVALDKLSNAGIPLGNQTVLL 273 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 G+ND P ++ L + V R++PYYL+ DL+ G SHFR + +G +I+ SL +G Sbjct: 274 AGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESLIGHTTGF 333 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y++D PGG GK+ + + I G+ + ++ I+ Y Sbjct: 334 AVPRYVVDAPGGGGKIPVMPNYIVSWGSDRVILRNYEGIITTY 376 >gi|116329760|ref|YP_799479.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116122653|gb|ABJ80546.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 370 Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 133/347 (38%), Positives = 195/347 (56%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ T Q + L +KE + + S + ++TP NL + +PN PI Q Sbjct: 24 WQIQNRIKTQTQLSEHIELTEKETLS-FEACSEFFEFSVTPYYLNLADTKDPNCPIRLQI 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P + EL ER+DP+ + H P+KG+ HRYPDR L L HVC VYCRFC R+ V Sbjct: 83 VPHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSK 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T ++ + AL Y + +I EVI +GGDPL LS ++L +L L+ I H+ +R Sbjct: 143 SVHTP-GKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239 HSR P+ P RI+ L K+ P+Y+ H NHP E + IS L G +I+L+ Sbjct: 202 HSRYPVTLPMRIDSSLCSVFKKHF-PIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLN 260 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLKGIND E L L + IKPYYLH D G+ FR+ IE G +I+ ++ Sbjct: 261 QSVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRG 320 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 +ISGL P Y++DL GG GKV + T + + SY + ++ + +++ Sbjct: 321 RISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYILRNYQDELYE 367 >gi|319782550|ref|YP_004142026.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168438|gb|ADV11976.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 370 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 129/280 (46%), Positives = 174/280 (62%), Gaps = 5/280 (1%) Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 +LI+ ++P DPI Q IP +EL E +DPI D++ SP+ + HR+ DR+LL + Sbjct: 63 DLIDWNDPADPIRAQVIPSPQELEEAEGELDDPIADHDFSPVPRLTHRHADRVLLFPTYQ 122 Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C VYCRFCFR+E + S G + + E ALAYI + +I EVI TGGDPL L K L + Sbjct: 123 CAVYCRFCFRKESLTS-IGRGYTREALEPALAYIADHPEIREVILTGGDPLSLPEKALAE 181 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEA 223 + + I HV++LR H+RVP+ P RI P L+ L+ G+ V I H NH E ++ Sbjct: 182 IRARIEAIAHVRLLRIHTRVPVALPSRITPGLVAALQ--GRLMVTIVTHFNHAREITQAT 239 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSH 282 A L AG +LL+QSVLLKG+ND E L L R + L +KPYYLHH DLA G +H Sbjct: 240 ETACRTLRQAGFVLLNQSVLLKGVNDSVEALEELCRELMYRLGVKPYYLHHGDLARGMAH 299 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 R TI +GQ + +L+ ++SG+C P Y+LDLP G GKV I Sbjct: 300 RRTTIAQGQALAEALRARLSGICNPVYVLDLPEGGGKVPI 339 >gi|310780280|ref|YP_003968612.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter polytropus DSM 2926] gi|309749603|gb|ADO84264.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter polytropus DSM 2926] Length = 716 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 131/326 (40%), Positives = 200/326 (61%), Gaps = 8/326 (2%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 QL+H K + + + +++ L K++ K I + A TP +LI+ + NDP+ Sbjct: 28 WQLKHSIKDIETLESVFDVELDAKDKKSMQKTIE-QFPFAATPYYLSLIDIGDYKNDPVY 86 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q +P EELN+ + DP+ +++ SP+ GI HRYPDR+LL + +VC +YCR C R+ Sbjct: 87 KQAVPDIEELNLTNCDMSDPLHEDHDSPVPGITHRYPDRVLLLVSNVCSMYCRHCTRKRK 146 Query: 118 VGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 VG + K+T + YI+ ++I +V+ +GGDP +LS L +L ++ I HV+ Sbjct: 147 VGDMDN--IPDKETIMNGIEYIKSHTEIRDVLLSGGDPFLLSDDYLDWILSEVKKIPHVE 204 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 ++R +R P+V PQRI LI LK+ P++I H NHP EF+EE+ +ISRLA+AGI Sbjct: 205 VIRIGTRTPVVLPQRITDNLINVLKKH-HPIWINTHFNHPKEFTEESKKSISRLADAGIP 263 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 L +QSVLL +ND P+I+ L+ V RI+PYYL+ DL+ G SHFR + +G +I+ S Sbjct: 264 LGNQSVLLSRVNDCPKIMKKLVHNLVANRIRPYYLYQCDLSEGLSHFRTPVGKGIEIIES 323 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322 L SG P Y++D PGG GK+ + Sbjct: 324 LIGHTSGFAIPRYVIDAPGGGGKIPV 349 >gi|283781148|ref|YP_003371903.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM 6068] gi|283439601|gb|ADB18043.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM 6068] Length = 436 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 117/313 (37%), Positives = 191/313 (61%), Gaps = 4/313 (1%) Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 + +TP +L++ + N P+ R +P E P E +DP+G++ HSP G+VHRYPDR Sbjct: 123 VGITPYYMSLLDREDANQPLRRTVVPVTGEFLRTPGEADDPLGEDGHSPTPGLVHRYPDR 182 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPL 155 +LL L C YCR+C R +VG G ++ S+ E A YI++ I +V+ +GGDPL Sbjct: 183 VLLLALDFCSTYCRYCTRSRVVG--HGEIMPSEQRLEKAFEYIRQTPTIRDVLISGGDPL 240 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 LS +L +L LR I H++ +R +++P V PQRI P+LI+ K+ P++++IH H Sbjct: 241 ALSEDKLDWILGRLRSIPHLEFVRIGTKMPAVLPQRITPQLIRVFKKY-SPLWMSIHFLH 299 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275 P E + EA A +RLA+AGI L SQ+VLLKG+ND + + +L+ + +R++PYY++ D Sbjct: 300 PDECTPEANQACARLADAGIPLGSQTVLLKGVNDRVDTMKDLVHRLLMMRVRPYYIYQCD 359 Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335 +G++HFR ++ +G +I+ L+ +G P Y++D PGG GK+ + + + Sbjct: 360 PISGSAHFRTSVSKGLEIIEGLRGHTTGYAVPTYVIDAPGGGGKIPLQPNYVVGRDGNDL 419 Query: 336 CITDHHNIVHDYP 348 + ++ V+ YP Sbjct: 420 LLRNYEGQVYRYP 432 >gi|154686384|ref|YP_001421545.1| hypothetical protein RBAM_019520 [Bacillus amyloliquefaciens FZB42] gi|154352235|gb|ABS74314.1| KamA [Bacillus amyloliquefaciens FZB42] Length = 473 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 122/348 (35%), Positives = 205/348 (58%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q Sbjct: 31 WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L + LK+ PV++ H N E +EE++AA +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIELTEESVAACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 +G P +++D PGG GK+ + + + I + ++ YP Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYP 375 >gi|116332642|ref|YP_802359.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116127509|gb|ABJ77601.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 370 Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 133/347 (38%), Positives = 194/347 (55%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ T Q + L +KE + + S + ++TP NL + +PN PI Q Sbjct: 24 WQIQNRIKTQTQLSEHIELTEKETLS-FEACSEFFEFSVTPYYLNLADTKDPNCPIRLQI 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P + EL ER+DP+ + H P+KG+ HRYPDR L L HVC VYCRFC R+ V Sbjct: 83 VPHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSK 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T ++ + AL Y + +I EVI +GGDPL LS ++L +L L+ I H+ +R Sbjct: 143 SVHTP-GKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239 HSR P+ P RI+ L K+ P+Y+ H NHP E + IS L G +I+L+ Sbjct: 202 HSRYPVTLPMRIDSSLCSVFKKHF-PIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLN 260 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLKGIND E L L + IKPYYLH D G+ FR+ IE G +I+ ++ Sbjct: 261 QSVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRG 320 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 +ISGL P Y++DL GG GKV + T + + SY ++ + +++ Sbjct: 321 RISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYIFRNYQDELYE 367 >gi|270307638|ref|YP_003329696.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family [Dehalococcoides sp. VS] gi|270153530|gb|ACZ61368.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family [Dehalococcoides sp. VS] Length = 730 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 132/353 (37%), Positives = 203/353 (57%), Gaps = 11/353 (3%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64 K L + + L E+ +++ ++ +++TP +LI+P N NDP+ Q +P Sbjct: 48 KDLATVEKLLGVKF-SAEKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVFIQSVPSA 106 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG T Sbjct: 107 AELNFSCHDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDVDKT 166 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 LS D L YI+ Q+ +V+ +GGDPL+LS L+ +L L+ I HVQ++R +RV Sbjct: 167 -LSRDDLVKGLEYIKNTPQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQVIRIGTRV 225 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V PQRI P L++ +K+ PV+I H NHP E + +I A+ LA+AGI L +Q+VLL Sbjct: 226 PVVLPQRITPHLVKIIKKY-HPVWINTHFNHPREITATSIRALRLLADAGIPLGNQTVLL 284 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L SG Sbjct: 285 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 344 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350 P Y++D P G GK+ I + + + + ++ I+ Y PPK Sbjct: 345 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397 >gi|194016677|ref|ZP_03055290.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061] gi|194011283|gb|EDW20852.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061] Length = 466 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 124/348 (35%), Positives = 205/348 (58%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + +DL + +E+ + +K + + +TP A+L+NP +P P+ Q Sbjct: 31 WQLTH-TVKTLEDLEKVVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+ YI+E ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI EL + LK+ PV++ H N E ++EA A RL NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P +++D PGG GK+ + + + + + ++ YP Sbjct: 328 TSGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYP 375 >gi|268315713|ref|YP_003289432.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus DSM 4252] gi|262333247|gb|ACY47044.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus DSM 4252] Length = 396 Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 130/339 (38%), Positives = 197/339 (58%), Gaps = 6/339 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+RH+ + +A++L + E+ I+ + +TP A+L++P +PN PI RQ Sbjct: 18 WQMRHR-IHTAEELSRWIRLTDEERRAIEATRGVFRWNITPYYASLMDPEDPNCPIRRQV 76 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P+ EEL DP+ + HSP+K ++H Y DR+ + C +YCR+C R+ MVG Sbjct: 77 VPRLEELAPDLIGVMDPLEEVAHSPVKNLIHNYRDRVAFCVTSECAIYCRYCLRKRMVGD 136 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 ++ + +AA+ YI +I +V+ TGGDPL LS L +L LR I HV+I+R Sbjct: 137 -AAFMMRKAELQAAIDYIAAHPEIRDVLLTGGDPLTLSETHLAWILDQLRAIPHVEIIRI 195 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R+P+ P RI PEL + L E P++I H NHP E + +A AI RL AGI + +Q Sbjct: 196 GTRMPVKLPYRITPELCRLL-ERYHPLWINTHFNHPKELTPDAAEAIDRLLRAGIPVGNQ 254 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GINDD + L V +R++PYYL+ L GT+HFR IE+G I+ +L+ + Sbjct: 255 TVLLRGINDDVATMKALCEGLVRMRVRPYYLYQAQLIGGTAHFRTPIEKGMAIMRALQGR 314 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339 +G P Y+LD P YGKV +D ++ G Y I + Sbjct: 315 TTGFAIPKYVLDTP--YGKVPLDGSYVRGRA-GDYVIVE 350 >gi|308173939|ref|YP_003920644.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7] gi|307606803|emb|CBI43174.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7] Length = 473 Score = 239 bits (611), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 123/348 (35%), Positives = 204/348 (58%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q Sbjct: 31 WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R PIV PQRI L Q LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPIVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 +G P +++D PGG GK+ + + + I + ++ YP Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYP 375 >gi|300088094|ref|YP_003758616.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527827|gb|ADJ26295.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 431 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 126/322 (39%), Positives = 192/322 (59%), Gaps = 4/322 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH+ +T+ ++L + + IK ++ + +A+TP +LINP + DPI RQ Sbjct: 51 WQFRHR-ITTVEELSRYLPLSVRERTRIKLVTAEFPMAITPYYLSLINPADAKDPIRRQA 109 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL REDP+ +++HS + G+VHRYPDR L+ L +CP+ CR C R+ Sbjct: 110 VPSVHELT-GEAGREDPLEEHSHSVVPGLVHRYPDRALMVLTDICPMLCRHCTRKRE-WR 167 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + G V +S +A + YI Q+ ++I +GGDPL LS +RL++VL LR I HV+I+R Sbjct: 168 KGGWVQNSTRVKAMVDYIGRTPQVRDIIISGGDPLTLSTRRLEEVLAALRAIPHVEIIRI 227 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R+P+V PQRI+ EL + L + P+++ H NHP E + EA AA RL AG+ + +Q Sbjct: 228 GTRLPVVLPQRIDVELCRMLSKY-SPIWVNTHFNHPGEITPEAAAACDRLLRAGVQVNNQ 286 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND NL + + ++PYYL D GT H +E G +I+ ++ Sbjct: 287 SVLLRGVNDTVATQLNLCHSLLRAMVRPYYLFQCDQVRGTEHLWTPVETGLRIIEGMRGH 346 Query: 301 ISGLCQPFYILDLPGGYGKVKI 322 SGL P Y++DLP G GK+ + Sbjct: 347 TSGLAIPNYVIDLPDGRGKIPL 368 >gi|124514855|gb|EAY56366.1| Lysine 2,3-aminomutase [Leptospirillum rubarum] Length = 383 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 124/328 (37%), Positives = 200/328 (60%), Gaps = 7/328 (2%) Query: 22 KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81 KE + + +E+ + I + +LI +P PI RQ IP EE+ + DP+G++ Sbjct: 26 KEGVGQ-REVEKTFPIRINAYYRSLIT--DPEGPIGRQVIPDPEEVLDF-DSPVDPLGED 81 Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 + SP+ IVHRYPDR+L + + CP+YCR+C R+ M+G+ +G V++ + E + YI+ Sbjct: 82 SDSPVPAIVHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEG-VVTRGEVEEGIEYIRTH 140 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 ++ +VI +GGDPL+L L+ +L LR I H++++R SRVP PQR+ PEL LK Sbjct: 141 PEVRDVILSGGDPLMLKDDYLEFILSGLRKIPHLEVIRIGSRVPSSLPQRVTPELCAMLK 200 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 + P+++ +H NHP E + E+ A + LA+AGI L Q+VL+KG+ND+ IL L + Sbjct: 201 KY-HPLFMNLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKL 259 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 + +R+KPYYL+ DL G +HFR + G +I+ L+ SG+ P +++D PGG GKV Sbjct: 260 LTIRVKPYYLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVP 319 Query: 322 IDTHN-IKKVGNGSYCITDHHNIVHDYP 348 I + + + +G + ++ V+ YP Sbjct: 320 ILPPDYLVSMEDGDVVLRNYEGNVYTYP 347 >gi|188586500|ref|YP_001918045.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351187|gb|ACB85457.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 420 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 127/348 (36%), Positives = 206/348 (59%), Gaps = 5/348 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL ++ +T + L + +E+ + IK+ +A+TP A+L++ +P+ PI R Sbjct: 25 WQLNNR-ITDVESLKEIINLTEEEEEGIKQTLKTIRMAITPYYASLMDKDDPSCPIRRHA 83 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P ELN + EDP+ +++ SP++GI HRYPDR+L + C +YCR C RR + GS Sbjct: 84 VPSSLELNFSEFDLEDPLSEDSDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRLAGS 143 Query: 121 -QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 K + D A+ YI+ Q+ +V+ +GGD L++S +RL+ +L L I+HV+I+R Sbjct: 144 TDKAAPIEVID--KAIDYIKNTPQVRDVLISGGDGLLISDERLEYILNELYKIEHVEIVR 201 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +R P+V PQRI LI LK+ P+++ H NHP E + EA A+++LA+AGI L + Sbjct: 202 IGTRAPVVLPQRITDNLISILKKY-HPIWLNTHFNHPKEITSEAKEALAKLADAGIPLGN 260 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+GIND P + L+ V+ R++PYY++ DL+ G HFR ++ G +I+ SL+ Sbjct: 261 QSVLLRGINDCPVTMKELVHELVKNRVRPYYIYQCDLSQGIEHFRTSVSAGLEIIESLRG 320 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + S + ++ ++ Y Sbjct: 321 HTSGYAVPTFVVDAPGGGGKTPVMPQYLISQSPDSVVLRNYEGVISKY 368 >gi|157692660|ref|YP_001487122.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032] gi|157681418|gb|ABV62562.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032] Length = 466 Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 124/348 (35%), Positives = 205/348 (58%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + +DL + +E+ + +K + + +TP A+L+NP +P P+ Q Sbjct: 31 WQLTH-TVKTLEDLEKIVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+ YI+E ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI EL + LK+ PV++ H N E ++EA A RL NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P +++D PGG GK+ + + + + + ++ YP Sbjct: 328 TSGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYP 375 >gi|328553134|gb|AEB23626.1| L-lysine 2,3-aminomutase [Bacillus amyloliquefaciens TA208] gi|328912092|gb|AEB63688.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens LL3] Length = 473 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 122/348 (35%), Positives = 204/348 (58%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q Sbjct: 31 WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L Q LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 +G P +++D PGG GK+ + + + I + ++ YP Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYP 375 >gi|224170200|ref|XP_002339353.1| predicted protein [Populus trichocarpa] gi|222874958|gb|EEF12089.1| predicted protein [Populus trichocarpa] Length = 361 Score = 239 bits (610), Expect = 4e-61, Method: Compositional matrix adjust. Identities = 119/314 (37%), Positives = 195/314 (62%), Gaps = 3/314 (0%) Query: 35 YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93 + +++TP +LIN + NDP+ +Q P EL I + DP+ ++ SP+ G+ HRY Sbjct: 47 FPLSITPYYLSLINTDDHENDPVFKQAFPCSRELEIEKHDMADPLSEDKDSPVPGVTHRY 106 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 PDR+LL++ +VC +YCR C R+ VG + ++ +D + Y+++ +I +V+ +GGD Sbjct: 107 PDRVLLQVSNVCSMYCRHCTRKRKVGD-RDSIPGREDILKGIDYVRQHPEIRDVLLSGGD 165 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+LS L +L +R I HVQ++R +R+P+V P RI PEL++ LK+ +P+++ H Sbjct: 166 PLMLSDDYLDWILTEVRRIPHVQVIRIGTRMPVVLPYRITPELVERLKKH-QPLWLNTHF 224 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E + A A+ LA+AGI L +QSVLL G+ND I+ +L+ VE R++PYYL+ Sbjct: 225 NHPREINASAKEALRLLADAGIPLGNQSVLLAGVNDCQRIMKSLVHKLVENRVRPYYLYQ 284 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 DLA G SHFR + +G +I+ SL+ SG P Y++D PGG GK+ ++ + + + Sbjct: 285 CDLAEGLSHFRTPVGKGIEIMESLRGHTSGFAVPTYVIDAPGGGGKIPMNPNYLISLSTN 344 Query: 334 SYCITDHHNIVHDY 347 + ++ ++ Y Sbjct: 345 KVVLRNYEGVITTY 358 >gi|57234982|ref|YP_180969.1| GNAT family L-lysine 2,3-aminomutase/acetyltransferase [Dehalococcoides ethenogenes 195] gi|57225430|gb|AAW40487.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family [Dehalococcoides ethenogenes 195] Length = 708 Score = 239 bits (610), Expect = 5e-61, Method: Compositional matrix adjust. Identities = 128/336 (38%), Positives = 198/336 (58%), Gaps = 10/336 (2%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDN 81 E+ +++ ++ +++TP +LI+P N NDP+ Q +P ELN ++EDP+ ++ Sbjct: 42 EKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVFIQSVPSAAELNFSCHDKEDPLAED 101 Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 SP GI HRYPDR+L + + C +YCR C R+ VG T LS D L YI+ Sbjct: 102 VDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDVDKT-LSRDDLVKGLEYIKNT 160 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 Q+ +V+ +GGDPL+LS L+ +L L+ I HVQ++R +RVP+V PQRI P L++ +K Sbjct: 161 PQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQVIRIGTRVPVVLPQRITPHLVKIIK 220 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 + PV++ H NHP E + +I A+ LA+AGI L +Q+VLL +ND P ++ L+ Sbjct: 221 KY-HPVWVNTHFNHPREITATSIRALRLLADAGIPLGNQTVLLAKVNDCPRVMKALVHKL 279 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 VE R++PYYL+ D A G SHFR +I +G +I+ +L SG P Y++D P G GK+ Sbjct: 280 VENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGFAVPTYVIDAPNGGGKIP 339 Query: 322 IDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350 I + + + + ++ I+ Y PPK Sbjct: 340 IMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 375 >gi|206603974|gb|EDZ40454.1| Lysine 2,3-aminomutase [Leptospirillum sp. Group II '5-way CG'] Length = 383 Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust. Identities = 123/320 (38%), Positives = 194/320 (60%), Gaps = 6/320 (1%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 E+ + + + +LI +P PI RQ IP EE+ + DP+G+++ SP+ I Sbjct: 33 EVEKTFPVRINAYYRSLIT--DPEGPIGRQVIPDPEEVLDF-DSPVDPLGEDSDSPVPAI 89 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 VHRYPDR+L + + CP+YCR+C R+ M+G+ +G V S + E + YI+ ++ +VI Sbjct: 90 VHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEGVVTRS-EVEEGIEYIRTHPEVRDVIL 148 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL+L L+ +L LR I H++I+R SRVP PQR+ PEL LK+ P+++ Sbjct: 149 SGGDPLMLKDDYLEFILSGLRKIPHLEIIRIGSRVPSSLPQRVTPELCAMLKKY-HPLFM 207 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 +H NHP E + E+ A + LA+AGI L Q+VL+KG+ND+ IL L + + +R+KPY Sbjct: 208 NLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKLLTIRVKPY 267 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN-IK 328 YL+ DL G +HFR + G +I+ L+ SG+ P +++D PGG GKV I + + Sbjct: 268 YLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVPILPPDYLV 327 Query: 329 KVGNGSYCITDHHNIVHDYP 348 + +G + ++ V+ YP Sbjct: 328 SMEDGDVVLRNYEGNVYTYP 347 >gi|45655809|ref|YP_003618.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602780|gb|AAS72255.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 365 Score = 239 bits (609), Expect = 7e-61, Method: Compositional matrix adjust. Identities = 134/347 (38%), Positives = 193/347 (55%), Gaps = 6/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 +Q R KT T + + +++I + S + ++TP L P +PN PI Q Sbjct: 21 IQNRIKTRTHLSEFLE---LSEKEILSFEACSQFFEFSVTPYYLGLAAPKDPNCPIRLQI 77 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EEL E++DP+ + P+KG+ HRYPDR+L L HVC VYCRFC R+ V S Sbjct: 78 VPHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRVLWYLSHVCAVYCRFCTRKRKV-S 136 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + +D + AL Y +I EVI +GGDPL LS +L +LK L+ I H+ +R Sbjct: 137 KSSHTPGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRI 196 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239 HSR P+ P RI+ L LK P+YI H NHP E + IS L G ++L+ Sbjct: 197 HSRYPVTLPMRIDSSLCAVLKRHF-PIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLN 255 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q VLLKGIND E L L + IKPYYLH D G+ FR+ IE+G +I+ ++ Sbjct: 256 QGVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRG 315 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 +ISGL P Y++DL GG GKV + T + + + SY ++ + +++ Sbjct: 316 RISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYQDELYE 362 >gi|163782523|ref|ZP_02177520.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1] gi|159882096|gb|EDP75603.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1] Length = 378 Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 121/332 (36%), Positives = 207/332 (62%), Gaps = 3/332 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q+R++ + S ++L + +E+++ I+ Y +A+TP +L++P + DPI Q I Sbjct: 29 QIRNR-IKSLEELQRYVRLTEEEVEGIRLTQGLYPLAITPYYLSLMDPDDTEDPIRLQAI 87 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P++ E++ + +P + G+ HRYPDR+L+ + C VYCR C R+ + ++ Sbjct: 88 PRRIEVDEEAQSAGEPDALREEGDIPGLTHRYPDRVLMSVTTFCAVYCRHCMRKRIF-AE 146 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + ++ + L+YI+E ++ +V+ +GG+PL LS+++++ +LK LR IKHV+I+RF Sbjct: 147 GERARTKEEIDRMLSYIREHEEVRDVLISGGEPLSLSNEKIEYILKGLREIKHVEIVRFG 206 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +R+P++ PQR E + + E P++I H NHP E +E A A+ RL GI + +Q+ Sbjct: 207 TRLPVLAPQRFFDEELLSILEKYSPIWINTHFNHPKEVTELAEEAVDRLLRHGIPVNNQT 266 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND+PEI+ +L R + +++KP YL H D G HFR T+++G +I+ L+ KI Sbjct: 267 VLLKGVNDNPEIMLSLFRKLLRIKVKPQYLFHCDPIRGAVHFRTTVDKGLEIMRFLRGKI 326 Query: 302 SGLCQPFYILDLPGGYGKVKID-THNIKKVGN 332 SG+ P Y +DLPGG GKV + + + + GN Sbjct: 327 SGMGIPTYAVDLPGGKGKVPLQPNYVVGREGN 358 >gi|116748157|ref|YP_844844.1| lysine 2,3-aminomutase YodO family protein [Syntrophobacter fumaroxidans MPOB] gi|116697221|gb|ABK16409.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB] Length = 460 Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 126/351 (35%), Positives = 201/351 (57%), Gaps = 8/351 (2%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYS---IALTPVIANLINPHNPNDPIA 57 QLR++ QD I + DE+K +++ +A+TP A+L++ ++P+ P+ Sbjct: 92 WQLRNRI----QDREALARIIRLSDDELKAVTSGRGPLPVAITPYYASLLDCNDPSQPVR 147 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 R +P E P E EDP+G+ S L +VHRYPDR+L + C YCR+C R M Sbjct: 148 RCVVPVDREYFHHPCETEDPLGEEKDSQLPNLVHRYPDRVLFLVTGYCSTYCRYCTRSRM 207 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG++ ++ + A+ YI+ I +V+ +GGDPL L + L+ +L LR I HV+ Sbjct: 208 VGNRGTYRFGHREWDRAIEYIERTPTIRDVLLSGGDPLTLPNDHLKWLLSRLRRIPHVEF 267 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 LR ++VP+V PQR+ L++ LK+ P++++IH HP E + E A +RLA+AGI L Sbjct: 268 LRIGTKVPVVLPQRVTMGLVRMLKQY-HPLWMSIHFTHPDELTPETAHACTRLADAGIPL 326 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 SQ+VLL G+ND+ E + L +++R+KPYYL+ D G+SHFR + +G +I+ L Sbjct: 327 GSQTVLLSGVNDNVETMTRLFHGLLKIRVKPYYLYQCDPIPGSSHFRTPVSKGLEIIRGL 386 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 + SG P Y++D PGG GKV + + + ++ ++ YP Sbjct: 387 RGFTSGYAVPTYVIDAPGGGGKVPLLPEYVAGRDGDDLLLRNYAGDLYRYP 437 >gi|94985093|ref|YP_604457.1| hypothetical protein Dgeo_0988 [Deinococcus geothermalis DSM 11300] gi|94555374|gb|ABF45288.1| Lysine 2,3-aminomutase [Deinococcus geothermalis DSM 11300] Length = 483 Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust. Identities = 116/288 (40%), Positives = 174/288 (60%), Gaps = 2/288 (0%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 + + +TP A+L++P +P P+ RQ IP EL ED + ++ HSP+ G+VHRYP Sbjct: 73 FRLDITPYFASLMDPEDPTCPVRRQVIPTHHELEPFTAMMEDSLAEDKHSPVPGLVHRYP 132 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 DR+L+ + C YCR+C R +VG T + L Y++ Q+ +V+ +GGDP Sbjct: 133 DRVLMLVTTQCASYCRYCTRSRIVGDPTET-FKPDEYRLQLEYLRNTPQVRDVLLSGGDP 191 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L L+ K L +L LR I+H++I+R +RVP+ P RI EL L E P+++ IH N Sbjct: 192 LTLAPKVLAGLLSELRKIEHIEIIRIGTRVPVFLPMRITQELCDVLAEH-HPLWMNIHVN 250 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 HP E + E A RL AG+ L +QSVLL+G+ND P I+ L+R V++R++PYY++ Sbjct: 251 HPKEITPEVAEACDRLTRAGVPLGNQSVLLRGVNDHPVIMQKLVRELVKIRVRPYYIYQC 310 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 DL G H R T+ +G +I+ SL+ SG P Y++D PGG GK+ + Sbjct: 311 DLVHGAGHLRTTVAKGLEIMESLRGHTSGYSVPTYVVDAPGGGGKIPV 358 >gi|300863800|ref|ZP_07108726.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506] gi|300338201|emb|CBN53872.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506] Length = 384 Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 117/313 (37%), Positives = 190/313 (60%), Gaps = 3/313 (0%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++A+TP A+L++P +P P+ Q +P++EEL I + DP ++ SP+ G+VHRYP Sbjct: 71 FAVAVTPHFASLLDPEDPLCPLRLQVVPKEEELTIDRADMVDPCSEDEDSPVPGLVHRYP 130 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 DR+LL L C YCR+C R +V SQ ++ +A +AY++E +++ +V+ +GGDP Sbjct: 131 DRVLLLALDTCAAYCRYCTRSRLV-SQGEMYPVTRRIDAIIAYLEEHTEVRDVLISGGDP 189 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L++S + L +L+ LR I H++ +R SRVP PQRI PEL+ L++ V++++H Sbjct: 190 LLMSDEPLDNLLRRLRAIPHIEFVRIGSRVPSFLPQRITPELVAVLRK--HRVWLSLHFC 247 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 H E + E A LA+ GI L SQ+VLLKG+ND + L +L ++LR++PYYL+ Sbjct: 248 HLRELTPEVAQACDLLADGGIPLGSQTVLLKGVNDSEQALKDLFHGLLKLRVRPYYLYQC 307 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334 D GT+H R +++ G +++ L+ +G P Y++D PGG GKV I + NG Sbjct: 308 DPVIGTAHLRTSVQTGIDLISKLRGHTTGYAVPTYVIDAPGGGGKVPIQADTLIAYENGK 367 Query: 335 YCITDHHNIVHDY 347 + + + Y Sbjct: 368 TTVRNWEGKTYTY 380 >gi|325111083|ref|YP_004272151.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305] gi|324971351|gb|ADY62129.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305] Length = 457 Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 114/323 (35%), Positives = 190/323 (58%), Gaps = 2/323 (0%) Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85 + +++ + +TP +L++P +P P+ + +P E P E +DP+G++ HSP Sbjct: 132 EALQQGGTMLPVGVTPYYMSLLDPTDPYQPLRKTVLPSTAEFVRTPGEADDPLGEDGHSP 191 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 + G+VHRYPDR+LL L C YCR+C R +VG + S E Y+Q Q+ Sbjct: 192 VPGLVHRYPDRVLLLALDFCSTYCRYCTRSRVVGHGE-IAPSDARLEKIFQYLQNSPQVR 250 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +V+ +GGDPL L ++L +L+ LR I H++ +R +++P V PQRI PEL+ ++ Sbjct: 251 DVLISGGDPLALKDEKLAYILRRLREIPHIEFVRIGTKMPAVLPQRITPELVNAIRPY-H 309 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 PV++++H HP E + E+ A RLA+AGI L SQ+VLLKG+ND+ E + L + R Sbjct: 310 PVWMSLHFLHPDECTPESKQACERLADAGIPLGSQTVLLKGVNDNVETMKQLTHKLLMNR 369 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++PYYL+ D +G++HFR ++ +G +I++ L+ +G P Y++D PGG GK+ + Sbjct: 370 VRPYYLYQCDPISGSAHFRTSVAKGLEIISGLRGHTTGYAVPTYVIDAPGGGGKIPLQPD 429 Query: 326 NIKKVGNGSYCITDHHNIVHDYP 348 + +G + + + YP Sbjct: 430 AVVGREDGHLVLRNFEGKLFRYP 452 >gi|325970648|ref|YP_004246839.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy] gi|324025886|gb|ADY12645.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy] Length = 363 Score = 238 bits (607), Expect = 9e-61, Method: Compositional matrix adjust. Identities = 124/321 (38%), Positives = 189/321 (58%), Gaps = 3/321 (0%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 +++N + + NLI+P++P+DPI RQ +P+ +E IL EE+ DP+ + N+S + + Sbjct: 32 DLTNTLPLKIPMYFLNLIDPNDPDDPIRRQVVPRWQEQRILDEEQLDPLCEVNYSVTERL 91 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +HRY R+ VCP+YCR CFRR G+ +G S + E A Y+ + E++F Sbjct: 92 IHRYQSRVAFLTTDVCPLYCRHCFRRRFTGTFQGPA-SKEQIEKAAEYVAVHPAVKEILF 150 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVY 208 TGGD LS K L+ +++T R + ++R SR+P P RI+ +LI LK+ P Y Sbjct: 151 TGGDVFTLSTKALEAMIQTFRDKRPDLVIRLCSRMPASYPMRIDADLIAMLKQFNTAPFY 210 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + NH E +E+AI A+ +AGI ++Q+VLLKG+NDD +L L T V RIKP Sbjct: 211 LMTQFNHRRELTEQAIQAVRMFVDAGIPAMNQTVLLKGVNDDVCVLEELCNTLVFNRIKP 270 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHNI 327 YYL DL +GT+HFR+ ++EG I A L++++SGL P Y +DLP G GKV + + Sbjct: 271 YYLFQGDLVSGTAHFRVPLKEGLAIEAELRKRLSGLAMPLYAIDLPQGGGKVPLMQGYLS 330 Query: 328 KKVGNGSYCITDHHNIVHDYP 348 ++ G G + + YP Sbjct: 331 EQSGCGLWSFRTVEGEIRTYP 351 >gi|311068654|ref|YP_003973577.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942] gi|310869171|gb|ADP32646.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942] Length = 472 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 121/348 (34%), Positives = 205/348 (58%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + +L + +E+ + ++ + + +TP A+L+NP NP PI Q Sbjct: 31 WQLTH-TVRTLDELKKVIHLTEEEEEGVRISTKTIPLNITPYYASLMNPDNPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P +++D PGG GK+ + + + + + ++ YP Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYP 375 >gi|24217359|ref|NP_714842.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str. 56601] gi|24202437|gb|AAN51857.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar Lai str. 56601] Length = 365 Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 134/347 (38%), Positives = 193/347 (55%), Gaps = 6/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 +Q R KT T + + +++I + S + ++TP L +P +PN PI Q Sbjct: 21 IQNRIKTRTHLSEFLE---LSEKEILSFEACSQFFEFSVTPYYLGLADPKDPNCPIRLQI 77 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EEL E++DP+ + P+KG+ HRYPDR L L HVC VYCRFC R+ V S Sbjct: 78 VPHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKV-S 136 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + +D + AL Y +I EVI +GGDPL LS +L +LK L+ I H+ +R Sbjct: 137 KSSHTPGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRI 196 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239 HSR P+ P RI+ L LK P+YI H NHP E + IS L G ++L+ Sbjct: 197 HSRYPVTLPMRIDSSLCAVLKRHF-PIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLN 255 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q VLLKGIND E L L + IKPYYLH D G+ FR+ IE+G +I+ ++ Sbjct: 256 QGVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRG 315 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 +ISGL P Y++DL GG GKV + T + + + SY ++ + +++ Sbjct: 316 RISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYRDELYE 362 >gi|312881010|ref|ZP_07740810.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260] gi|310784301|gb|EFQ24699.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260] Length = 422 Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust. Identities = 124/340 (36%), Positives = 194/340 (57%), Gaps = 2/340 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +T+ + L + + EI+E +A+TP A+LI+P +P DP+ RQ +P E Sbjct: 29 ITTVEVLRRVIPLSDPEAREIQESLGALRMAITPYYASLIDPKDPEDPVRRQAVPSILET 88 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 ++ + DP+ ++ SP+ G+ HRYPDR +L L C +YCR C RR G + S Sbjct: 89 HVAETDLRDPLHEDVDSPVPGLTHRYPDRGILLLTDQCSMYCRHCTRRRKAG-ETDHAYS 147 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 AAL YI+ +V+FTGGDP ++ L VL + I HV+I+RF +R P+V Sbjct: 148 RDRIAAALDYIRRTPTFRDVLFTGGDPFLVDDGTLDWVLTEVGSIPHVEIVRFGTRTPVV 207 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI +L LK PV++ H NHP E + ++ AA ++LANAGI L +QSVLLKG+ Sbjct: 208 MPQRITDDLCALLKRH-HPVWVNTHFNHPREITPQSRAACAKLANAGIPLGNQSVLLKGV 266 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND P + L + + LR++PYY++ DL+ G HFR + +G +I+ L+ SG+ P Sbjct: 267 NDCPYVFRELNQQLLTLRVRPYYIYQCDLSQGIEHFRTPVAKGLEIMEYLRGHTSGMAVP 326 Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +I+D PGG GK+ + + + + + + ++ + Y Sbjct: 327 TFIVDAPGGGGKIPLLPNYLVSMSDKRVVLRNYEGVFSTY 366 >gi|330837285|ref|YP_004411926.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides DSM 17374] gi|329749188|gb|AEC02544.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides DSM 17374] Length = 358 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 119/319 (37%), Positives = 188/319 (58%), Gaps = 5/319 (1%) Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78 L +KEQ E S + + + A+LI P + +DPI RQ +P E+ P E EDP+ Sbjct: 26 LTEKEQAWEKDGTSPPFGV--STYYASLITPSDSDDPIRRQILPTSCEMMYSPGESEDPL 83 Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 + HS ++HRY +R+ + C VYCR CFRR G+Q+G +++D AA Y+ Sbjct: 84 AEEEHSVTSRLIHRYAERVAFLVTDACAVYCRHCFRRRFTGTQRGPA-TTEDIIAAARYV 142 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 ++ E++FTGGD LS++++ ++ R ++ I+R SRVP+V P RI L+ Sbjct: 143 GAHQEVKEILFTGGDMFTLSNEKIDALIGEFRAVRPDLIIRLCSRVPVVLPSRITDGLMA 202 Query: 199 CLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 +K+ + P ++ + NHP E + ++ A +R +AGI + +QSVLL+G+NDD IL L Sbjct: 203 VMKKHSSAPFFLMVQFNHPRELTAQSREATARFIDAGIPVFNQSVLLRGVNDDAGILEEL 262 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 + RIKPYYL DL GT+H R+ +E+G +V L+ ++SGL P Y +DLP G Sbjct: 263 CNGLLAARIKPYYLFQGDLVEGTAHLRVPLEKGLALVKELRRRLSGLAMPVYAVDLPEGG 322 Query: 318 GKVKIDTHNIK-KVGNGSY 335 GKV +D+ +K + +G++ Sbjct: 323 GKVPVDSMYLKGRDSDGAW 341 >gi|270307988|ref|YP_003330046.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS] gi|270153880|gb|ACZ61718.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS] Length = 439 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 126/315 (40%), Positives = 184/315 (58%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TS ++ + E+ ++ +S + ++ TP +LI+ N NDP+ Q +P EL Sbjct: 65 VTSVAEIARFFHLSAEEYRDMDSVSAVFPLSATPYYLSLIDFDNVNDPVKLQLMPDTAEL 124 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 DP+G+ + S + G+VHRYPDR+++ L +CPV CR C R+ G V + Sbjct: 125 CFDAYCCSDPLGEEHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R +R P+V Sbjct: 184 QAEIDAMLAYIRQNPVIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRIGTRYPVV 243 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI+ EL L + G +++ H NHP E +EE+ A RL AG+ + +QSVLLKGI Sbjct: 244 LPQRIDDELCNMLSKYGT-IWLNTHYNHPNEITEESRRACDRLVRAGVPVNNQSVLLKGI 302 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND I +L + +++PYYL D GT HF TIE G I+ L+ SGL P Sbjct: 303 NDSVAIQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTTIETGVGIIEGLRGYTSGLAVP 362 Query: 308 FYILDLPGGYGKVKI 322 Y++DLPGG GK+ + Sbjct: 363 NYVIDLPGGGGKITV 377 >gi|39996853|ref|NP_952804.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA] gi|39983741|gb|AAR35131.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA] gi|298505867|gb|ADI84590.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens KN400] Length = 353 Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 121/310 (39%), Positives = 183/310 (59%), Gaps = 14/310 (4%) Query: 27 EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPL 86 ++ + Y + +TP L+ P DPI RQ IP EL +++ DP+ + SP+ Sbjct: 28 QLAPVIRRYPMRITPGYLRLVE--APGDPIWRQCIPDPAEL--CDDQQSDPLHEERLSPV 83 Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKS 142 G++HRYPDR++ + C VYCRFC R+ VG ++S+ E L YI E Sbjct: 84 PGLIHRYPDRVVWVVSGECAVYCRFCMRKRQVGC-----MTSRHCEDPFGEPLRYIAETP 138 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 I +VI +GGDPL+L +RL+++L L I HV+++R +R P+ P+RI L + LK Sbjct: 139 AIRDVILSGGDPLLLDDERLEEILARLAAIPHVEMVRIGTRTPVTLPERITARLCRMLKR 198 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 P+Y+ H NHP E + EA A +RLA+AGI L +QSVLL +NDDP ++ LM+ + Sbjct: 199 Y-HPLYVNTHFNHPREITAEAAKACARLADAGIPLGNQSVLLADVNDDPAVMTRLMQLLL 257 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 +R++PYY+H DL GT HFR + G +I+ +L+ SG+ P Y++D PGG GK+ + Sbjct: 258 SIRVRPYYIHQMDLVRGTGHFRTPVATGLEILTALRGNTSGMATPHYVIDAPGGKGKIPL 317 Query: 323 DTHNIKKVGN 332 I + G+ Sbjct: 318 LPDCISRRGD 327 >gi|134045706|ref|YP_001097192.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5] gi|132663331|gb|ABO34977.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5] Length = 433 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 125/343 (36%), Positives = 209/343 (60%), Gaps = 4/343 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIARQFIPQK 64 K + + + NL K E+ EI++ + +++TP A+LI+ N + DPI +Q + Sbjct: 37 KDVDTLEKFLGINLDKHEK-KEIQKAIEVFPMSITPYYASLIDTKNLDKDPIYKQSVASS 95 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 +EL + E EDP+ +++ SP+ GI HRYPDR+L + C +YCR C R+ V S+K + Sbjct: 96 KELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPNCAMYCRHCTRKRKV-SEKSS 154 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV+++R SRV Sbjct: 155 NPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVELIRIGSRV 214 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V PQRI L+ LK+ P++I H NHP E ++ + A+ +L+++GI L +Q+VLL Sbjct: 215 PVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVEITKASKVALDKLSDSGIPLGNQTVLL 273 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 G+ND P ++ L + V R++PYYL+ DL+ G SHFR ++ +G +I+ SL +G Sbjct: 274 AGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESLIGHTTGF 333 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y++D PGG GK+ + + + G+ + ++ I+ Y Sbjct: 334 AVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITTY 376 >gi|332702266|ref|ZP_08422354.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay] gi|332552415|gb|EGJ49459.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay] Length = 447 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 116/314 (36%), Positives = 191/314 (60%), Gaps = 3/314 (0%) Query: 35 YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93 + +++TP +LI+ + NDP+ RQ P EL+I P + DP+ ++ SP GI HRY Sbjct: 64 FPLSITPYYLSLIDTADYANDPVFRQAFPSVRELDIGPHDMADPLHEDEDSPAPGITHRY 123 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 PDR+L + ++C +YCR C R+ VG + G + E LAYI+ ++ +V+ +GGD Sbjct: 124 PDRVLFHVSNLCAMYCRHCTRKRKVGDE-GHIPRRAQMEQGLAYIRSAPRVRDVLLSGGD 182 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+L + L +L LR I+HV+++R SR+P+V P R+ +L+ +++ PV++ H Sbjct: 183 PLMLPDETLDWLLWNLRKIEHVEVVRIGSRMPVVLPYRVTDDLMSIIRKH-HPVWLNTHF 241 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E + A A+++LA+AGI L +QSVLL G+ND P I+ +L+ V R++PYYL+ Sbjct: 242 NHPREVTRSAREALAKLADAGIPLGNQSVLLAGVNDCPRIMRSLLHKLVRNRVRPYYLYQ 301 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 DL+ G +HFR + +G +I+ SL SG +P Y++D PGG GK+ + + + Sbjct: 302 CDLSEGLTHFRTPVGKGIEIIESLVGHTSGFARPTYVIDAPGGGGKIPVTPNYVISWATN 361 Query: 334 SYCITDHHNIVHDY 347 + ++ ++ Y Sbjct: 362 KVVLRNYEGVITTY 375 >gi|45358424|ref|NP_987981.1| lysine 2,3-aminomutase [Methanococcus maripaludis S2] gi|44921182|emb|CAF30417.1| Lysine 2,3-aminomutase [Methanococcus maripaludis S2] Length = 433 Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust. Identities = 124/343 (36%), Positives = 210/343 (61%), Gaps = 4/343 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64 K + + ++ +KE+ EI++ + + +++TP A+LI+ N DPI +Q + Sbjct: 37 KDVDTLENFLGITFDEKEKT-EIQKAIDVFPMSITPYYASLIDIKNLGKDPIYKQSVASS 95 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 +EL + E EDP+ ++ SP+ GI HRYPDR+L + C +YCR C R+ V S+K + Sbjct: 96 KELILENFEMEDPLSEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRKV-SEKSS 154 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 S ++ + A+ YI+ ++I +V+ +GGDPL+LS + L +L + IKHV+++R SRV Sbjct: 155 NPSKEEIQKAIDYIKNNNKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVELIRIGSRV 214 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+++GI L +Q+VLL Sbjct: 215 PVVLPQRITDNLVNVLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPLGNQTVLL 273 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 G+ND P ++ L + V R++PYYL+ DL+ G SHFR ++ +G +I+ SL +G Sbjct: 274 AGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESLIGHTTGF 333 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y++D PGG GK+ + + + G+ + ++ I+ Y Sbjct: 334 AVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITSY 376 >gi|153004183|ref|YP_001378508.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. Fw109-5] gi|152027756|gb|ABS25524.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. Fw109-5] Length = 385 Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 121/343 (35%), Positives = 192/343 (55%), Gaps = 4/343 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L +A++L + +E+ + + +A+TP A+L++P +P+ PI Q IP E Sbjct: 25 ALRTAEELGRVVWLGEEERRGLAQALGRTRVAVTPYYASLMDPRHPSCPIRLQAIPSARE 84 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P + DPIG+ H P + IVH+Y DR+L + C VYCR C RR + G Sbjct: 85 AEEAPGDLRDPIGEEAHRPARAIVHKYRDRVLFLAVDRCSVYCRHCTRRRITFGADGG-F 143 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 E +AY++ ++ +VI +GGDPL+LS +RL +L LR I HVQ+LR +R P+ Sbjct: 144 DRDAIEEGIAYVRAHREVRDVIVSGGDPLVLSDERLDALLGGLRAIPHVQLLRVATRAPV 203 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 P R+ P L L+ P+++ H NHP E + +A AA L + G+ + +QSVLL+G Sbjct: 204 TCPMRVTPALAALLRRHA-PLFVVTHFNHPAECTPDARAACEALVDHGVPVENQSVLLRG 262 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +N +L +L + R++PYYLH DLA GT+H R +E G I+ +++ + SGL Sbjct: 263 VNSSARLLTDLNERLLTFRVRPYYLHQGDLAEGTAHLRTPLEAGVAILEAMRGRTSGLAI 322 Query: 307 PFYILDLPGGYGKVKID-THNIKKVGNGSYCITDHHNIVHDYP 348 P +DLP G GK+ + ++ + + G G++ + H + YP Sbjct: 323 PHLAVDLPDGGGKITLQPSYQLGREG-GAHALRSHRGGRYLYP 364 >gi|152975473|ref|YP_001374990.1| lysine 2,3-aminomutase YodO family protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024225|gb|ABS21995.1| lysine 2,3-aminomutase YodO family protein [Bacillus cytotoxicus NVH 391-98] Length = 472 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 123/342 (35%), Positives = 198/342 (57%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDEAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIMKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D PGG GK+ + + + + + ++ YP Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 375 >gi|298372919|ref|ZP_06982909.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058] gi|298275823|gb|EFI17374.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058] Length = 411 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 119/303 (39%), Positives = 185/303 (61%), Gaps = 2/303 (0%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + E+ + +KE +A+TP +LI+ NPN P+ +Q IP E + + DP+ Sbjct: 40 LTTEEENGVKESLKTLRMAITPYYLSLIDQSNPNCPVRKQAIPTHAETHHSAADLLDPLH 99 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 ++ SP G+ HRYPDR+LL + +C +YCR C RR G Q + S D A+ YI Sbjct: 100 EDGDSPAPGLTHRYPDRVLLLVTDMCSMYCRHCTRRRFAG-QTDSSSSKDDISKAIDYIA 158 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 Q+ +V+ +GGD L++S RL+ ++ LR I HV+I+R +R P+V PQRI +L+ Sbjct: 159 RTPQVRDVLLSGGDALMISDTRLESIISRLREIPHVEIIRIGTRTPVVCPQRITDDLVNM 218 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 LK+ P+++ H NHP E +EE+IAA R+ANAGI L +QSVLL+G+ND + L+ Sbjct: 219 LKKY-HPIWLNTHFNHPQEVTEESIAACERMANAGIPLGNQSVLLRGVNDCVPTMKKLVH 277 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 V++R++PYY++ DL+ G HFR + +G +I+ +L+ SG P +++D PGG GK Sbjct: 278 QLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIENLRGHTSGYAVPTFVVDAPGGGGK 337 Query: 320 VKI 322 + Sbjct: 338 TPV 340 >gi|296329460|ref|ZP_06871947.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674784|ref|YP_003866456.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str. W23] gi|296153342|gb|EFG94204.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413028|gb|ADM38147.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str. W23] Length = 471 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 118/348 (33%), Positives = 206/348 (59%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI +L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDQLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P +++D PGG GK+ + + + + + ++ YP Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKIILRNFEGVITSYP 375 >gi|228991284|ref|ZP_04151242.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442] gi|228997381|ref|ZP_04157001.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17] gi|229005016|ref|ZP_04162741.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4] gi|228756220|gb|EEM05540.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4] gi|228762340|gb|EEM11266.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17] gi|228768508|gb|EEM17113.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442] Length = 482 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 123/342 (35%), Positives = 198/342 (57%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q +P EE Sbjct: 46 TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISEE 105 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 106 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 164 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 165 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 224 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 225 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 283 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 284 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 343 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D PGG GK+ + + + + + ++ YP Sbjct: 344 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 385 >gi|150402033|ref|YP_001329327.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C7] gi|150033063|gb|ABR65176.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C7] Length = 433 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 123/329 (37%), Positives = 203/329 (61%), Gaps = 3/329 (0%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIARQFIPQKEELNILPEEREDPI 78 ++ E+ EI++ + +++TP A+LI+ N + DPI +Q + +EL + E EDP+ Sbjct: 50 LENEEKKEIQKAIEVFPMSITPYYASLIDIKNLDKDPIYKQSVASSKELILENFEMEDPL 109 Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 ++ SP+ GI HRYPDR+L + C +YCR C R+ V S+K + S ++ + A+ YI Sbjct: 110 SEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRKV-SEKSSNPSKEEIQKAIDYI 168 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 + +I +V+ +GGDPL+LS + L +L + IKHV+++R SRVP+V PQRI L+ Sbjct: 169 RNNDKIRDVLLSGGDPLLLSDEYLDWILSEISSIKHVELIRIGSRVPVVLPQRITDNLVN 228 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 LK+ P++I H NHP E ++E+ A+ +L+++GI L +Q+VLL G+ND P ++ L Sbjct: 229 TLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPLGNQTVLLAGVNDCPYVMRKLN 287 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318 + V R++PYYL+ DL+ G SHFR + +G +I+ SL +G P Y++D PGG G Sbjct: 288 QKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESLIGHTTGFAVPRYVVDAPGGGG 347 Query: 319 KVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 K+ + + I G+ + ++ I+ Y Sbjct: 348 KIPVMPNYIVSWGSDRVILRNYEGIITTY 376 >gi|254463955|ref|ZP_05077366.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales bacterium Y4I] gi|206684863|gb|EDZ45345.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales bacterium Y4I] Length = 360 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 116/313 (37%), Positives = 185/313 (59%), Gaps = 2/313 (0%) Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 + +TP A+L+ +P++P+ R IP +E LP E DP+G+++ +P+ G+VHRYPDR Sbjct: 34 VGITPYYASLMGLDDPDEPLRRTHIPVGQEYLQLPGEAGDPLGEDHDTPVPGLVHRYPDR 93 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 +L C YCR+C R MVG G S + AL YI ++ +V+ +GGDPL Sbjct: 94 VLFLATGTCSTYCRYCTRSRMVGQAGGEYQFSVSQWDRALDYIAAHPEVRDVLLSGGDPL 153 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 ++ +L +L LR I HV+ +R +++PIV P R+ +L++ LK P++++IH H Sbjct: 154 TIADDKLDYLLGRLRAIPHVEFIRLGAKMPIVLPMRVTRDLVRMLKRH-HPLWMSIHVTH 212 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275 P E + EA A RLA+AGI L SQ+VLLKGIND +IL + + + R++PYYL+ D Sbjct: 213 PAELTPEATEACKRLADAGIPLGSQTVLLKGINDSVDILKPMYQALLMRRVRPYYLYQCD 272 Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335 G++HFR + +G +I+ L+ +G P +++D PGG GK+ + + Sbjct: 273 PITGSAHFRTPVAKGLEIIEGLRGHTTGYAVPQFVIDAPGGGGKIPLLPDYVAGRDGSDL 332 Query: 336 CITDHHNIVHDYP 348 + + NI++ YP Sbjct: 333 ILRNFENILYRYP 345 >gi|78187430|ref|YP_375473.1| hypothetical protein Plut_1576 [Chlorobium luteolum DSM 273] gi|78167332|gb|ABB24430.1| L-lysine 2,3-aminomutase [Chlorobium luteolum DSM 273] Length = 438 Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 123/350 (35%), Positives = 200/350 (57%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+RH +TL++ + L L EQ + + +++TP +LIN + NDP+ Sbjct: 28 WQMRHSVRTLSAFESLLGITL-SDEQRKAFGQTVAKFPMSITPYYLSLINTRDMANDPVF 86 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q +P EL I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+ Sbjct: 87 LQSVPSPRELEIMTGDMADPLHEDADSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + T+ + YI+ Q+ +V+ +GGDP +LS L +L L+ I+HV++ Sbjct: 147 VG-DRDTIPGRSAISEGIDYIRRTPQVRDVLLSGGDPFLLSDDYLDWILGELQAIEHVEV 205 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V PQRI P L+ LK+ +PV++ H NHP E ++ + A++ LA+ G+ L Sbjct: 206 IRIGTRTPVVLPQRITPALVAVLKKH-QPVWVNTHFNHPREITQSSRNALALLADGGLPL 264 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + + ++ ++ Y Sbjct: 325 IGHTSGFSVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTY 374 >gi|57234545|ref|YP_181370.1| radical SAM domain-containing protein [Dehalococcoides ethenogenes 195] gi|57224993|gb|AAW40050.1| radical SAM domain protein [Dehalococcoides ethenogenes 195] Length = 439 Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust. Identities = 125/315 (39%), Positives = 185/315 (58%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TS ++ + E+ +++ +S + ++ TP +L++ N NDP+ Q +P EL Sbjct: 65 VTSVTEIARFFHLSAEEYRDMEAVSAVFPLSATPYYLSLVDFDNVNDPVKCQLMPDTAEL 124 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 N DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+ G V + Sbjct: 125 NFDTRCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R +R P+V Sbjct: 184 QAEIDAMLAYIRQHQVIRDVIISGGDPLTLSTPRLESVLSALRSIPHVEIIRIGTRYPVV 243 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI+ EL L + G P+++ H NHP E +EE+ A RL AG+ + +QSVLLKGI Sbjct: 244 LPQRIDDELCNMLSKYG-PIWLNTHYNHPNEITEESRQACDRLVRAGVPVNNQSVLLKGI 302 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND + +L + +++PYYL D GT HF IE G I+ L+ SGL P Sbjct: 303 NDSVSVQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYTSGLAVP 362 Query: 308 FYILDLPGGYGKVKI 322 Y++DLPGG GK+ I Sbjct: 363 NYVIDLPGGGGKITI 377 >gi|297568546|ref|YP_003689890.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio alkaliphilus AHT2] gi|296924461|gb|ADH85271.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio alkaliphilus AHT2] Length = 443 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 124/325 (38%), Positives = 192/325 (59%), Gaps = 6/325 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 LRH K++ + + L N E+ E++E + +A+TP +LI+ N DP+ Sbjct: 33 WHLRHTIKSIDTVERLLNTTF-SPEKRRELEETIARFPMAITPHYFSLIDRENYEEDPVF 91 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ +P EL I E DP+ ++ SP+ GI HRYPDR+L + ++C +YCR C R+ Sbjct: 92 RQSVPSLSELKIGASEHSDPLAEDQDSPVTGITHRYPDRVLFHVSNLCAMYCRHCTRKRK 151 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG +V K A L YI++ I +V+ +GGDP +L + +L LR I+HV++ Sbjct: 152 VGDVD-SVPGKKTLAAGLDYIRQTPAIRDVLLSGGDPFLLGDDLIDWLLTELRAIEHVEV 210 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V PQRI P L++ LK+ P+++ H NHP E + + A++ LA+AGI L Sbjct: 211 IRIGTRTPVVLPQRITPRLVEILKKH-HPLWVNTHFNHPREITSRSRRALAMLADAGIPL 269 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P ++ L+ V R++PYYL+ DL+ G + FR + +G +I+ SL Sbjct: 270 GNQSVLLAGVNDCPRVIKRLVHKLVANRVRPYYLYQCDLSEGLASFRTPVGKGIEIIESL 329 Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322 SG P Y++D PGG GK+ + Sbjct: 330 IGHTSGFAVPTYVIDAPGGGGKIPV 354 >gi|291484572|dbj|BAI85647.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. natto BEST195] Length = 471 Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust. Identities = 118/348 (33%), Positives = 205/348 (58%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P +++D PGG GK+ + + + + + ++ YP Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVTLRNFEGVITSYP 375 >gi|321311619|ref|YP_004203906.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5] gi|320017893|gb|ADV92879.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5] Length = 471 Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 118/348 (33%), Positives = 205/348 (58%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P +++D PGG GK+ + + + + + ++ YP Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYP 375 >gi|30020383|ref|NP_832014.1| lysine 2,3-aminomutase [Bacillus cereus ATCC 14579] gi|206971483|ref|ZP_03232433.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134] gi|218232653|ref|YP_002366998.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264] gi|228958567|ref|ZP_04120287.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229044042|ref|ZP_04191731.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676] gi|229069827|ref|ZP_04203109.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185] gi|229079468|ref|ZP_04212008.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2] gi|229109738|ref|ZP_04239324.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15] gi|229127695|ref|ZP_04256684.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4] gi|229144892|ref|ZP_04273289.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24] gi|229150521|ref|ZP_04278737.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550] gi|229178666|ref|ZP_04306030.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W] gi|229190380|ref|ZP_04317381.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876] gi|296502862|ref|YP_003664562.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171] gi|29895934|gb|AAP09215.1| Lysine 2,3-aminomutase [Bacillus cereus ATCC 14579] gi|206733468|gb|EDZ50640.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134] gi|218160610|gb|ACK60602.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264] gi|228593164|gb|EEK50982.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876] gi|228604824|gb|EEK62281.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W] gi|228633014|gb|EEK89627.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550] gi|228638614|gb|EEK95047.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24] gi|228655772|gb|EEL11621.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4] gi|228673779|gb|EEL29037.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15] gi|228703838|gb|EEL56284.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2] gi|228713230|gb|EEL65123.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185] gi|228725323|gb|EEL76591.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676] gi|228801194|gb|EEM48091.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296323914|gb|ADH06842.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171] Length = 473 Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 124/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + + + ++ YP S Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|15605944|ref|NP_213321.1| hypothetical protein aq_454 [Aquifex aeolicus VF5] gi|4033489|sp|O66761|Y454_AQUAE RecName: Full=Uncharacterized KamA family protein aq_454 gi|2983117|gb|AAC06722.1| hypothetical protein aq_454 [Aquifex aeolicus VF5] Length = 370 Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust. Identities = 124/316 (39%), Positives = 189/316 (59%), Gaps = 3/316 (0%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 E+ + IK Y A+TP +LINP +P DPI Q IP+ E++ + +P Sbjct: 39 EEEEGIKRTQGLYPFAITPYYLSLINPEDPKDPIRLQAIPRVVEVDEKVQSAGEPDALKE 98 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 + G+ HRYPDR+LL + C VYCR C R+ + SQ + ++ + + YI+ Sbjct: 99 EGDIPGLTHRYPDRVLLNVTTFCAVYCRHCMRKRIF-SQGERARTKEEIDTMIDYIKRHE 157 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLK 201 +I +V+ +GG+PL LS ++L+ +L LR IKHV+I+RF +R+P++ PQR N +L+ L Sbjct: 158 EIRDVLISGGEPLSLSLEKLEYLLSRLREIKHVEIIRFGTRLPVLAPQRFFNDKLLDIL- 216 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 E P++I H NHP E +E A A+ RL GI + +Q+VLLKG+NDDPE++ L R Sbjct: 217 EKYSPIWINTHFNHPNEITEYAEEAVDRLLRRGIPVNNQTVLLKGVNDDPEVMLKLFRKL 276 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 + +++KP YL H D G HFR TI++G +I+ L+ ++SG P Y +DLPGG GKV Sbjct: 277 LRIKVKPQYLFHCDPIKGAVHFRTTIDKGLEIMRYLRGRLSGFGIPTYAVDLPGGKGKVP 336 Query: 322 IDTHNIKKVGNGSYCI 337 + + +KK + Sbjct: 337 LLPNYVKKRKGNKFWF 352 >gi|16079027|ref|NP_389850.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168] gi|221309872|ref|ZP_03591719.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168] gi|221314195|ref|ZP_03596000.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319118|ref|ZP_03600412.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323391|ref|ZP_03604685.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. SMY] gi|4033499|sp|O34676|KAMA_BACSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName: Full=KAM gi|2415401|gb|AAB72069.1| YodO [Bacillus subtilis] gi|2634361|emb|CAB13860.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168] Length = 471 Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 118/348 (33%), Positives = 205/348 (58%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P +++D PGG GK+ + + + + + ++ YP Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYP 375 >gi|28210601|ref|NP_781545.1| L-lysine 2,3-aminomutase [Clostridium tetani E88] gi|28203039|gb|AAO35482.1| L-lysine 2,3-aminomutase [Clostridium tetani E88] Length = 424 Score = 235 bits (599), Expect = 8e-60, Method: Compositional matrix adjust. Identities = 117/322 (36%), Positives = 195/322 (60%), Gaps = 3/322 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ T Q NL+ +E+ + I + + ++P A LI+P +PNDP+ +Q Sbjct: 23 WQVKNRITTIDQLKKIINLLPEEE-EAIDKCLKTLRMGISPYYATLIHPDDPNDPVRKQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL+ + DP+ ++ SP+ G+ H YPDR+LL + +C +YCR C RR G Sbjct: 82 VPTLHELSFSEADMFDPLHEDASSPVPGLTHAYPDRVLLLVTDMCSMYCRHCTRRRFAGH 141 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 ++ ++ + AL YI+ + +V+ +GGD ++S + + +LK LR I HV+I+RF Sbjct: 142 TDNSMPQNR-IDMALDYIRNTPTVRDVLLSGGDGFMISDENIDYILKNLREIPHVEIIRF 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V+P RI L+ LK+ P+++ H NHP E +E +I A +LANAGI + +Q Sbjct: 201 GTRTPVVNPMRITDNLVNILKKY-HPIWVNTHFNHPNEITEYSIKACEKLANAGIPIGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GIND I +L+ V++R++PYYL+ DL+ G HFR + +G +I+ L+ Sbjct: 260 TVLLRGINDCVYIQKDLVHKLVKMRVRPYYLYQCDLSQGIEHFRTKVSKGIEIIEGLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKI 322 SG P +++D PGG GK+ + Sbjct: 320 TSGFAVPTFVVDAPGGGGKIPV 341 >gi|229074953|ref|ZP_04207960.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18] gi|229096796|ref|ZP_04227766.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29] gi|229102897|ref|ZP_04233591.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28] gi|229115778|ref|ZP_04245180.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3] gi|228667661|gb|EEL23101.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3] gi|228680570|gb|EEL34753.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28] gi|228686638|gb|EEL40546.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29] gi|228708181|gb|EEL60347.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18] Length = 473 Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust. Identities = 124/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + + + ++ YP S Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|256829555|ref|YP_003158283.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium baculatum DSM 4028] gi|256578731|gb|ACU89867.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium baculatum DSM 4028] Length = 411 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 114/296 (38%), Positives = 175/296 (59%), Gaps = 2/296 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 ++ + R +P E +LP E DP+G+ HSP+ GIVHRYPDR+L + C YCR+C Sbjct: 105 SEALRRCILPDVRETQVLPFETSDPLGEEGHSPVPGIVHRYPDRVLFLVTEFCSTYCRYC 164 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 R +VG + G + + AL YI++ ++ +V+ +GGDPL L +++ +L LR I Sbjct: 165 TRSRLVG-KAGHRSDMRSWQVALDYIRQHDEVRDVLLSGGDPLTLPAMKIEWLLSQLRAI 223 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 HV+I+R S+VP V PQRI P L++ L+ P++I++H HP E + + A +RLA+ Sbjct: 224 PHVEIVRIGSKVPAVLPQRITPNLVRMLRRY-HPLFISLHFTHPDEITPDTALACNRLAD 282 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 GI L SQ+VLL G+NDD E + LM V R++PYY++ D G+SHFR ++ G Sbjct: 283 GGIPLGSQTVLLSGVNDDVETMKRLMHGLVRNRVRPYYMYQCDPIPGSSHFRTPVDTGLS 342 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 I+ L+ SG C P Y++D PGG GKV + + + ++ + + YP Sbjct: 343 IIQGLRGHTSGYCIPTYVIDAPGGGGKVPLQPGYFQGRDEQGVVLRNYEDRIFHYP 398 >gi|134298608|ref|YP_001112104.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum reducens MI-1] gi|134051308|gb|ABO49279.1| L-lysine 2,3-aminomutase [Desulfotomaculum reducens MI-1] Length = 406 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 122/294 (41%), Positives = 180/294 (61%), Gaps = 3/294 (1%) Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78 L KE+ D I + +A+TP A+LI + PI Q +P +EL + DP+ Sbjct: 41 LTPKEK-DGIAACLKKFRMAITPYYASLIKSEDRQCPIRMQAVPNPKELVCTRGDMRDPL 99 Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 ++ SP+ G+ HRYPDR+LL + C +YCR C RR + G Q L + A +YI Sbjct: 100 HEDVDSPVPGLTHRYPDRVLLLVTDCCSMYCRHCTRRRIAG-QNDRSLPKAQLDRAFSYI 158 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 + I +V+ +GGDP L+ ++L+ +LK LR IKHV+++RF +R P+V PQRI PEL Sbjct: 159 RSNPTIRDVVISGGDPFTLADEQLEYILKKLRAIKHVEVIRFGTRTPVVLPQRITPELCN 218 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 L E PV+I H NHP E + + AA++RLA AGI + +QSVLLKGIND I+ L+ Sbjct: 219 ML-EKYHPVWINTHFNHPREITPASSAAVARLAKAGIPVNNQSVLLKGINDRAHIMKKLV 277 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 + +++RI+PYYL+ DL+ G HFR ++ G +I+ +L+ SGL P Y++D Sbjct: 278 QGLLKIRIRPYYLYQCDLSEGIGHFRTSVSTGIEIMENLRGHTSGLAVPTYVID 331 >gi|218897268|ref|YP_002445679.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842] gi|228900889|ref|ZP_04065104.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222] gi|228908066|ref|ZP_04071914.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200] gi|228939455|ref|ZP_04102043.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972309|ref|ZP_04132920.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978923|ref|ZP_04139289.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407] gi|218545608|gb|ACK98002.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842] gi|228780797|gb|EEM29009.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407] gi|228787326|gb|EEM35294.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820155|gb|EEM66192.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228851484|gb|EEM96290.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200] gi|228858815|gb|EEN03260.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222] gi|326940003|gb|AEA15899.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar chinensis CT-43] Length = 473 Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 124/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + + + ++ YP S Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|228965278|ref|ZP_04126372.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794512|gb|EEM42024.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str. T04001] Length = 451 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 124/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + + + ++ YP S Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|258404824|ref|YP_003197566.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium retbaense DSM 5692] gi|257797051|gb|ACV67988.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium retbaense DSM 5692] Length = 440 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 125/352 (35%), Positives = 206/352 (58%), Gaps = 10/352 (2%) Query: 1 MQLRHK--TLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDP 55 QLRH L + + L + K++Q + EI + +++TP +LI+ + NDP Sbjct: 29 WQLRHSISDLATVEKLLDIEFDPEKRKQYAKTMEI---FPMSVTPYYLSLIDTEDYENDP 85 Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 + +Q IP +EL+I + +DP+ ++ SP GI HRYPDR+L + + C +YCR C R+ Sbjct: 86 VFKQAIPLPDELDIAVHDMKDPLSEDEDSPAPGITHRYPDRVLFHVSNTCSMYCRHCTRK 145 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 VG V D +A L YI+ Q+ +V+ +GGDP +L ++ +L LR I+HV Sbjct: 146 RKVGDSD-FVPCRDDLQAGLDYIRNTPQVRDVLLSGGDPFMLPDHQIDWLLGQLRSIEHV 204 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235 +++R SR+P+V P RI L+ LK+ P+++ H NHP E ++ + A+++LA+AGI Sbjct: 205 EVIRIGSRMPVVLPYRITDNLVSILKKH-HPLWLNTHFNHPRELTQSSRKALAKLADAGI 263 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 L +Q+VLL G+ND P ++ L+ V+ R++PYYL+ DL+ G +HFR + +G +I+ Sbjct: 264 PLGNQTVLLAGVNDCPRLMKTLIHKLVQNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIE 323 Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SL SG P Y++D PGG GK+ + + I G + ++ ++ Y Sbjct: 324 SLIGHTSGFAVPTYVIDAPGGGGKIPVMPNYIVSWGTNKVILRNYEGVITTY 375 >gi|228952639|ref|ZP_04114715.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807105|gb|EEM53648.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 473 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR + HV+I+R +R P+ Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREVPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + + + ++ YP S Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|15614818|ref|NP_243121.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125] gi|10174874|dbj|BAB05974.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125] Length = 468 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 122/348 (35%), Positives = 201/348 (57%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +E+ + ++ + + +TP A+L+NP +P PI Q Sbjct: 30 WQLTH-TIRTIDDLKQVINLTEEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 88 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 89 VPISKEIEKTKYDMEDPLAEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 147 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+ YI + + +V+ +GGD L+++ + L+ +LK LR I HV+I+R Sbjct: 148 QIGMGVPKKQMDAAIDYIAQTPAVRDVLLSGGDGLLINDQILEYILKNLRAIPHVEIIRI 207 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L LK+ PV++ H N E ++EA A +L +AG+ + +Q Sbjct: 208 GTRAPVVFPQRITDHLCSILKKY-HPVWLNTHFNTSLEITKEAKEACEKLVDAGVPVGNQ 266 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V +R++PYY++ DL+ G SHFR I +G +I+ +L+ Sbjct: 267 AVILAGINDSTHIMKKLMHDLVAIRVRPYYVYQCDLSEGISHFRAPISKGIEIMEALRGH 326 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P +++D PGG GKV + + I + + ++ YP Sbjct: 327 TSGYAVPTFVVDAPGGGGKVTLQPNYILSQSPSKTVLRNFEGVISTYP 374 >gi|229085246|ref|ZP_04217488.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44] gi|228697965|gb|EEL50708.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44] Length = 482 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 122/342 (35%), Positives = 197/342 (57%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q +P EE Sbjct: 46 TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISEE 105 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 106 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 164 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI + Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 165 PKKQLDDAIAYISQTPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 224 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 225 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 283 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 284 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 343 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D PGG GK+ + + + + + ++ YP Sbjct: 344 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 385 >gi|302038861|ref|YP_003799183.1| l-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii] gi|300606925|emb|CBK43258.1| L-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii] Length = 377 Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 128/327 (39%), Positives = 200/327 (61%), Gaps = 7/327 (2%) Query: 27 EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPL 86 EI++I Y + +TP + I D I +Q +P + E+ E +DP+ ++ SP+ Sbjct: 28 EIEDIVGDYPMRITPTVLATIK--EKGDAIWKQVVPDRAEMADADAE-DDPLEEDLMSPV 84 Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 +VHRYPDR+LL + + CP+YCRFC R+ +VG K L + + A+AY++E ++ + Sbjct: 85 PHLVHRYPDRVLLMVTNQCPIYCRFCTRKRLVG--KPGFLKKGELDRAIAYLREHQEVRD 142 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 VI +GGDPL+L L+++LK+LR I H++++R +RVP P+RI P+L +K+ P Sbjct: 143 VILSGGDPLLLPDHLLERILKSLRTIPHLELIRIGTRVPGSLPERITPKLCDIIKKY-HP 201 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 Y+ +H NHP E + E A LA+AG+ L +Q+VLLKG+NDDPEI+ LM + R+ Sbjct: 202 FYMNLHFNHPDELTPEVKRACGMLADAGVPLGAQTVLLKGVNDDPEIMKRLMHQLLLARV 261 Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK-IDTH 325 KPYYL+ DL GT+HFR ++E G KI+ SL+ SG+ P +++D PGG GK+ + Sbjct: 262 KPYYLYQADLTKGTNHFRTSVETGLKIIKSLQGHTSGMGVPHFVIDAPGGGGKIPLLPAD 321 Query: 326 NIKKVGNGSYCITDHHNIVHDYPPKSS 352 + + S + ++ N YP S Sbjct: 322 YLVNLDEDSAVLRNYENRTFHYPQPGS 348 >gi|320354450|ref|YP_004195789.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032] gi|320122952|gb|ADW18498.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032] Length = 373 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 133/350 (38%), Positives = 193/350 (55%), Gaps = 14/350 (4%) Query: 7 TLTSAQDLYNANLIKKEQI--------DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 T+ S Q L + + + EQ+ + ++ + HY + ++ LI H P+ + Sbjct: 25 TMPSRQPLSSTFITRPEQLAHALAIPLEPLQAVHAHYPLRISAYYLQLIKQHG--LPLWK 82 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q +P +ELN DP+ + N SP+ +VH+YPDR L + C +YCRFC R+ V Sbjct: 83 QAVPDLKELND-SSGLVDPLDEENLSPVPCLVHKYPDRALFLVCSECAMYCRFCTRKRKV 141 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G + V++ + A L Y+ I +V+ +GGDP +L RL+++LK LR I V + Sbjct: 142 G-KPDMVINDQTIAAGLEYLARTPAITDVLVSGGDPFMLPLSRLEQILKALRAIPSVVTI 200 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R +RVP P R+ L LK+ P+YI H NHP E + EA A RLA+AGI L Sbjct: 201 RIGTRVPCTLPSRVTLRLAAMLKKY-HPLYINTHFNHPAEITPEAALACGRLADAGIPLG 259 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 Q+VLL+G+ND PE + LMR + +R+KPYYL DL GTSHFR TIE G I+ L Sbjct: 260 CQTVLLRGVNDSPETIKMLMRQLLRIRVKPYYLFQADLTRGTSHFRTTIETGVDIMRQLI 319 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 +SG+ P Y LD PGG GK+ + H I +G + T + ++ YP Sbjct: 320 GHVSGMAVPTYALDAPGGGGKIPLTPHYINSLGK-TLEFTTYRHLPCSYP 368 >gi|256828026|ref|YP_003156754.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium baculatum DSM 4028] gi|256577202|gb|ACU88338.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium baculatum DSM 4028] Length = 437 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 119/318 (37%), Positives = 192/318 (60%), Gaps = 4/318 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64 K++ + L +KE+ ++ + + +A+TP +LI+P + NDP+ Q P Sbjct: 36 KSIEGVERLLGIEFTEKER-KALRNTTEKFPMAITPYYLSLIDPSDYRNDPVFMQAFPST 94 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 +EL I + DP+ ++ SP+ G+ HRYPDR+LL + + C +YCR C R+ VG + + Sbjct: 95 DELRIESHDMSDPLHEDEDSPVPGLTHRYPDRVLLHVSNTCAMYCRHCTRKRKVG-DRDS 153 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 + S +D + YI+ Q+ +V+ +GGDP +LS L +L + I+HV+++R +R Sbjct: 154 IPSREDLRQGIEYIRNTPQVRDVLLSGGDPFLLSDDMLDWLLTEIGGIEHVEVVRIGTRT 213 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V P RI EL++ LK+ P++I H NHP E + + A+++LANAGI L +QSVLL Sbjct: 214 PVVLPYRITDELVEMLKKH-HPLWINTHFNHPAEITASSKQALAKLANAGIPLGNQSVLL 272 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 G+ND P ++ L V R++PYYL+ DL+ G +HFR I +G +I+ SL+ SG Sbjct: 273 AGVNDCPRLIKVLNHKLVRNRVRPYYLYQCDLSEGLTHFRTPIGKGIEILESLRGHTSGF 332 Query: 305 CQPFYILDLPGGYGKVKI 322 P Y++D PGG GK+ + Sbjct: 333 SIPTYVVDAPGGGGKIPL 350 >gi|52080665|ref|YP_079456.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580] gi|52786038|ref|YP_091867.1| hypothetical protein BLi02294 [Bacillus licheniformis ATCC 14580] gi|319645375|ref|ZP_07999608.1| KamA protein [Bacillus sp. BT1B_CT2] gi|52003876|gb|AAU23818.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580] gi|52348540|gb|AAU41174.1| KamA [Bacillus licheniformis ATCC 14580] gi|317393184|gb|EFV73978.1| KamA protein [Bacillus sp. BT1B_CT2] Length = 469 Score = 234 bits (597), Expect = 1e-59, Method: Compositional matrix adjust. Identities = 118/342 (34%), Positives = 200/342 (58%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + +DL + KE+ + ++ + + +TP A+L+NP +P PI Q +P EE Sbjct: 36 TVRTLEDLKKVVNLTKEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPLAEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 MHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+ YI++ + +V+ +GGD L+++ + L+ +LK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDQAIGYIRDTPDVRDVLISGGDGLLINDQILEYILKNLRAIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI +L LK+ PV++ H N E ++EA A +L NAG+ + +Q+V+L G Sbjct: 215 VFPQRITDKLCSILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D PGG GK+ I + + + + ++ YP Sbjct: 334 PTFVVDAPGGGGKIAIQPNYLISQSPDKVVLRNFEGVITSYP 375 >gi|242280776|ref|YP_002992905.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio salexigens DSM 2638] gi|242123670|gb|ACS81366.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio salexigens DSM 2638] Length = 437 Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 117/314 (37%), Positives = 192/314 (61%), Gaps = 3/314 (0%) Query: 35 YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93 + +A+TP +LI+ + NDP+ Q P EEL I + DP+ ++ SP+ GI HRY Sbjct: 64 FPLAITPYYLSLIDEEDYENDPVFLQSFPSPEELKIERCDMTDPLHEDEDSPVPGITHRY 123 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 PDR+L + ++C +YCR C R+ VG Q ++ S+ E + YI+ Q+ +V+ +GGD Sbjct: 124 PDRVLFHISNLCSMYCRHCTRKRKVGDQD-SIPSTSQLEKGIEYIRNTPQVRDVLLSGGD 182 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 P +LS ++L +L + I+HV+++R +R+P+V P RI +L+ LK+ P++I H Sbjct: 183 PFMLSDEKLDWILTKIGEIEHVEVVRIGTRMPVVLPYRITDDLVNMLKKH-HPLWINTHF 241 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E ++ + AI++LA+AGI L +QSVLL G+ND P ++ L + V+ R++PYYL+ Sbjct: 242 NHPREVTDSSRRAIAKLADAGIPLGNQSVLLAGVNDCPRLIKTLNQKLVKNRVRPYYLYQ 301 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 DL+ G SHFR + +G +I+ SL+ SG P Y++D PGG GK+ + + I Sbjct: 302 CDLSEGLSHFRTPVGKGIEILESLRGHTSGFAVPTYVVDAPGGGGKIPVMPNYIVSWATN 361 Query: 334 SYCITDHHNIVHDY 347 + ++ ++ Y Sbjct: 362 KVVLRNYEGVITTY 375 >gi|257470355|ref|ZP_05634446.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185] gi|317064564|ref|ZP_07929049.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185] gi|313690240|gb|EFS27075.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185] Length = 415 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 116/315 (36%), Positives = 193/315 (61%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + S +DL + E+ + +K+ +A+TP +L++ ++PN P+ +Q IP +E+ Sbjct: 30 IESLEDLKKYITLSAEEEEGVKKTLETLRMAVTPYYFSLMDNNDPNCPVRKQAIPSIKEI 89 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G+ + Sbjct: 90 HQAEADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGASDDAMPM 149 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + + A+ YI + Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R SR P+V Sbjct: 150 DR-IDKAIEYIAKTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRIGSRTPVV 208 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI PEL++ LK+ P+++ H NHP E + E+ A LANAGI L +QSVLL+GI Sbjct: 209 LPQRITPELVEMLKKY-HPIWLNTHFNHPKEVTPESKKACELLANAGIPLGNQSVLLRGI 267 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ SG P Sbjct: 268 NDCVHVMKKLVHELVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVP 327 Query: 308 FYILDLPGGYGKVKI 322 +++D PGG GK + Sbjct: 328 TFVVDAPGGGGKTPV 342 >gi|30262308|ref|NP_844685.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames] gi|47527599|ref|YP_018948.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor'] gi|49185154|ref|YP_028406.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne] gi|49479498|ref|YP_036410.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52143159|ref|YP_083670.1| lysine 2,3-aminomutase [Bacillus cereus E33L] gi|65319605|ref|ZP_00392564.1| COG1509: Lysine 2,3-aminomutase [Bacillus anthracis str. A2012] gi|118477725|ref|YP_894876.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam] gi|165870485|ref|ZP_02215139.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488] gi|167632881|ref|ZP_02391207.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442] gi|167639704|ref|ZP_02397974.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193] gi|170686947|ref|ZP_02878166.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465] gi|170706603|ref|ZP_02897062.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389] gi|177649254|ref|ZP_02932256.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174] gi|190565714|ref|ZP_03018634.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I] gi|196033856|ref|ZP_03101267.1| L-lysine 2,3-aminomutase [Bacillus cereus W] gi|196040024|ref|ZP_03107327.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99] gi|196043261|ref|ZP_03110499.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108] gi|206974107|ref|ZP_03235025.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97] gi|217959809|ref|YP_002338361.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187] gi|218903441|ref|YP_002451275.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820] gi|222095894|ref|YP_002529951.1| lysine 2,3-aminomutase [Bacillus cereus Q1] gi|225864277|ref|YP_002749655.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102] gi|227814883|ref|YP_002814892.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684] gi|228914904|ref|ZP_04078509.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228927370|ref|ZP_04090427.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228933607|ref|ZP_04096457.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228945921|ref|ZP_04108264.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228985395|ref|ZP_04145554.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229091290|ref|ZP_04222508.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42] gi|229121855|ref|ZP_04251075.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201] gi|229139003|ref|ZP_04267580.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26] gi|229155888|ref|ZP_04283989.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342] gi|229184527|ref|ZP_04311730.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1] gi|229196526|ref|ZP_04323270.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293] gi|229601618|ref|YP_002866645.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248] gi|254684881|ref|ZP_05148741.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CNEVA-9066] gi|254722289|ref|ZP_05184077.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A1055] gi|254737328|ref|ZP_05195032.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Western North America USA6153] gi|254743487|ref|ZP_05201172.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Kruger B] gi|254751644|ref|ZP_05203681.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Vollum] gi|254760163|ref|ZP_05212187.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Australia 94] gi|301053835|ref|YP_003792046.1| lysine 2,3-aminomutase [Bacillus anthracis CI] gi|30256939|gb|AAP26171.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames] gi|47502747|gb|AAT31423.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor'] gi|49179081|gb|AAT54457.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne] gi|49331054|gb|AAT61700.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51976628|gb|AAU18178.1| lysine 2,3-aminomutase [Bacillus cereus E33L] gi|118416950|gb|ABK85369.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam] gi|164713640|gb|EDR19163.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488] gi|167512413|gb|EDR87789.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193] gi|167531693|gb|EDR94358.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442] gi|170128334|gb|EDS97202.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389] gi|170668998|gb|EDT19742.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465] gi|172084328|gb|EDT69386.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174] gi|190563741|gb|EDV17706.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I] gi|195993536|gb|EDX57493.1| L-lysine 2,3-aminomutase [Bacillus cereus W] gi|196025570|gb|EDX64239.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108] gi|196029283|gb|EDX67887.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99] gi|206748263|gb|EDZ59652.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97] gi|217065467|gb|ACJ79717.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187] gi|218537953|gb|ACK90351.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820] gi|221239952|gb|ACM12662.1| lysine 2,3-aminomutase [Bacillus cereus Q1] gi|225789207|gb|ACO29424.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102] gi|227005066|gb|ACP14809.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684] gi|228586882|gb|EEK44956.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293] gi|228598938|gb|EEK56555.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1] gi|228627495|gb|EEK84221.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342] gi|228644358|gb|EEL00613.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26] gi|228661644|gb|EEL17264.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201] gi|228692056|gb|EEL45797.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42] gi|228774348|gb|EEM22755.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228813795|gb|EEM60073.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228826067|gb|EEM71850.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228832266|gb|EEM77846.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228844700|gb|EEM89746.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266026|gb|ACQ47663.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248] gi|300376004|gb|ADK04908.1| lysine 2,3-aminomutase [Bacillus cereus biovar anthracis str. CI] gi|324326330|gb|ADY21590.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 473 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + + + ++ YP S Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|42781397|ref|NP_978644.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987] gi|42737319|gb|AAS41252.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987] Length = 473 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + + + ++ YP S Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|47565659|ref|ZP_00236699.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241] gi|47557295|gb|EAL15623.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241] Length = 473 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + + + ++ YP S Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|85860656|ref|YP_462858.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB] gi|85723747|gb|ABC78690.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB] Length = 486 Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 125/350 (35%), Positives = 205/350 (58%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 QLRH K L + + L + L + + + K I + +++TP +LI+ + NDP+ Sbjct: 80 WQLRHCIKDLDTFETLLDIRLPETLR-RQFKLIVEKFPMSITPYYLSLIDTEDLENDPVF 138 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q P EL++ + DP+ ++ SP+ G+ HRYPDR+LL + + C +YCR C R+ Sbjct: 139 KQSFPAINELDVQSTDMSDPLHEDRDSPVPGLTHRYPDRVLLLISNTCAMYCRHCTRKRR 198 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + T+ S + + YI++ Q+ +V+ +GGDP +LS L +L L+ I+HV++ Sbjct: 199 VGD-RDTIPSREQIMKGIEYIRDTPQVRDVLLSGGDPFLLSTDYLDWILIELKKIEHVEV 257 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P V P RI EL++ LK+ P++I H NHP E + + AA+ +LA+AGI L Sbjct: 258 IRIGTRTPAVLPYRITDELVEMLKKH-HPLWINTHFNHPRELTASSRAALRKLADAGIPL 316 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P I+ +L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 317 GNQSVLLSGVNDCPRIMRSLVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 376 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P Y++D P G GK+ + + + + ++ ++ Y Sbjct: 377 IGHTSGFCVPTYVIDAPAGGGKIPVMPNYLISWSTNKVVLRNYEGVITTY 426 >gi|228921012|ref|ZP_04084347.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838558|gb|EEM83864.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 473 Score = 233 bits (595), Expect = 2e-59, Method: Compositional matrix adjust. Identities = 123/346 (35%), Positives = 197/346 (56%), Gaps = 2/346 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+ YI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDDAITYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + + + ++ YP S Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|229017613|ref|ZP_04174507.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273] gi|229023830|ref|ZP_04180315.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272] gi|228737515|gb|EEL88025.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272] gi|228743682|gb|EEL93788.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273] Length = 472 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 122/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D PGG GK+ + + + + + ++ YP Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 375 >gi|163940087|ref|YP_001644971.1| lysine 2,3-aminomutase YodO family protein [Bacillus weihenstephanensis KBAB4] gi|229011567|ref|ZP_04168753.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048] gi|229133129|ref|ZP_04261965.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196] gi|229167131|ref|ZP_04294874.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621] gi|163862284|gb|ABY43343.1| lysine 2,3-aminomutase YodO family protein [Bacillus weihenstephanensis KBAB4] gi|228616365|gb|EEK73447.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621] gi|228650338|gb|EEL06337.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196] gi|228749722|gb|EEL99561.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048] Length = 472 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 122/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D PGG GK+ + + + + + ++ YP Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 375 >gi|162455543|ref|YP_001617910.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56'] gi|161166125|emb|CAN97430.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56'] Length = 411 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 130/354 (36%), Positives = 194/354 (54%), Gaps = 6/354 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNPNDPIARQF 60 QLRH L+SA +L+ A + E++ + I +TP +L + +P PI RQ Sbjct: 59 QLRH-ALSSADELHGALSLTPEELAGARRAEKAGLPIRVTPYYLSLCDNADPACPIRRQC 117 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E +P + DP+G+ H +V RYPDR LL C VYCRFC R MVG Sbjct: 118 VPLADESAEVPGDLVDPLGEVAHEVAPHLVQRYPDRALLLATDRCAVYCRFCTRSRMVGD 177 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 G V + A+AY++ ++ +VI +GGDPL +S R+ +++ LR I+ V+ +R Sbjct: 178 GGGAVALER-LAPAMAYLEAHPEVRDVIVSGGDPLAVSTDRVVRLIARLRQIQSVETIRL 236 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ PQRI EL++ LK P+++ H NHP E + A A RLA+ G +++Q Sbjct: 237 ATRVPVTLPQRITAELVRALKPY-HPLWVMTHFNHPKELTPAAERACKRLADHGFPVMNQ 295 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GINDD LA L R V R++PYYL D GT+H R + G ++ L+ + Sbjct: 296 TVLLRGINDDATTLATLFRGLVRWRVRPYYLLQMDPVRGTAHLRTPLATGVSLMEQLQGR 355 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY--PPKSS 352 ++G+ P I+D PGG GKV I + G + H + +Y PP S Sbjct: 356 LTGIALPKLIVDTPGGMGKVPIGPEYVVDRRPGRTVLRTHRGVEVEYVDPPAGS 409 >gi|73668214|ref|YP_304229.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro] gi|72395376|gb|AAZ69649.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro] Length = 414 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 127/350 (36%), Positives = 205/350 (58%), Gaps = 5/350 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH+ + + ++L + + + ++IK+ + +A++P A+LI+P +PN PI Q Sbjct: 16 WQYRHR-IETVEELEKLIKLSEPEKEDIKKALEVFPMAISPYYASLIDPKDPNCPIRMQA 74 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 +P EL E EDP+ ++ SP + I HRYPDR+L + + C +YCR C R+ V Sbjct: 75 VPSSAELKKSSWELEDPLCEDRDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 134 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G+++ S K + YI+E S+I +V+ +GGD L++S +RL +L L I HV+I+ Sbjct: 135 GNREYD-YSEKAIREGIEYIREHSEIRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIV 193 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R SRVP+ PQRI PEL + L E V++ H NHP E + EA A+ LA AG+ L Sbjct: 194 RLGSRVPVTLPQRITPELCEIL-EKYPSVWLNTHFNHPKEITPEAKKAMRMLAKAGVPLG 252 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +QSVLL+G+ND P I+ L ++++ +PYYL+ DL+ G HFR + G +I+ L+ Sbjct: 253 NQSVLLRGVNDCPMIIKKLCHELLKIKTRPYYLYQCDLSFGLEHFRTPVSRGIEIIEMLR 312 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SGL P +++D PGG GK+ + + + + + ++ ++ YP Sbjct: 313 GHTSGLAVPTFVIDAPGGGGKIPVGPNYLISSSDTGVVLRNYEGVICMYP 362 >gi|73748466|ref|YP_307705.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1] gi|73660182|emb|CAI82789.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1] Length = 439 Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q IP EL Sbjct: 65 VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQLIPDTAEL 124 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+ G V + Sbjct: 125 CFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R +R P+V Sbjct: 184 QAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSISHVEIIRIGTRYPVV 243 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +QSVLLKGI Sbjct: 244 LPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQSVLLKGI 302 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND + L + +++PYYL D GT HF IE G I+ L+ SGL P Sbjct: 303 NDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYTSGLAVP 362 Query: 308 FYILDLPGGYGKVKI 322 Y++DLPGG GK+ I Sbjct: 363 NYVIDLPGGGGKITI 377 >gi|229161268|ref|ZP_04289255.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803] gi|228622364|gb|EEK79203.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803] Length = 473 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 122/346 (35%), Positives = 198/346 (57%), Gaps = 2/346 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK+LR I HV+I+R +R P+ Sbjct: 155 PKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKSLREIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + + + ++ YP S Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|124485172|ref|YP_001029788.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z] gi|124362713|gb|ABN06521.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z] Length = 453 Score = 233 bits (594), Expect = 3e-59, Method: Compositional matrix adjust. Identities = 130/350 (37%), Positives = 202/350 (57%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+RH +++ Q + KE+ +E++ + I++TP +LI+ + NDPI Sbjct: 43 WQVRHAVRSIDMVQQVLGITFDPKER-EELQRTVEKFPISITPYYLSLIDTEDYRNDPIF 101 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ P EL + E DP+ ++ SP + I HRYPDR+L + + C +YCR C R+ Sbjct: 102 RQAFPSPAELIVENYELSDPLAEDKDSPCECITHRYPDRVLFLVSNTCAMYCRHCTRKRK 161 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG K ++ + +AYI+E +QI +V+ +GGDP +LS + L +L L I HV++ Sbjct: 162 VGD-KDSIPDREKILEGIAYIRENTQIRDVLLSGGDPFMLSDESLDWILTELTAIPHVEV 220 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +RVP+V P RI +L+ LK+ KP++I NHP E + A AA+++L +AGI L Sbjct: 221 IRIGTRVPVVLPFRITNQLVDILKKH-KPIWINTQFNHPKEMTPSAQAAVAKLVDAGIPL 279 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL IND P I+ L+ V+ RI+PYYL+ DL+ G SHFR I +G +I+ SL Sbjct: 280 GNQSVLLARINDCPVIMKELVHQLVKNRIRPYYLYQCDLSEGISHFRTPIAKGIEIMESL 339 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + + ++ I+ Y Sbjct: 340 IGHTSGFAVPRYVVDAPGGGGKIPVSPNYLLTWSVNKVVLRNYEGIICTY 389 >gi|229059963|ref|ZP_04197337.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603] gi|228719376|gb|EEL70980.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603] Length = 472 Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 121/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + ++ + +K + + +TP A L+NP +P PI Q +P EE Sbjct: 36 TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I H++I+R +R P+ Sbjct: 155 PKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHIEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D PGG GK+ + + + + + ++ YP Sbjct: 334 PTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYP 375 >gi|229030019|ref|ZP_04186084.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271] gi|228731280|gb|EEL82197.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271] Length = 478 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 125/347 (36%), Positives = 200/347 (57%), Gaps = 4/347 (1%) Query: 7 TLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 T+ + DL NLI +E+ + +K + + +TP A L+NP +P PI Q +P E Sbjct: 36 TIKTLDDLKKVINLIPEEE-EGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISE 94 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G Sbjct: 95 ELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMG 153 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P Sbjct: 154 VPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAP 213 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L Sbjct: 214 VVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQAVILA 272 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 273 GINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYA 332 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + + + ++ YP S Sbjct: 333 VPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|301166000|emb|CBW25574.1| conserved hypothetical protein [Bacteriovorax marinus SJ] Length = 340 Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust. Identities = 122/271 (45%), Positives = 171/271 (63%), Gaps = 7/271 (2%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 + P+A QF+PQ E ++ E DPIGD+N SPL IVHRY +RIL VCPV CR+C Sbjct: 49 DSPLANQFLPQVSENDLGGES--DPIGDHNQSPLAQIVHRYENRILFFPTQVCPVICRYC 106 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FR+ +G+ L + E L Y+++ S+I E+IF+GGDPLILS +R++ L + I Sbjct: 107 FRKNELGTNDE--LFKANFEKVLEYLKQHSEINEIIFSGGDPLILSDERIEFYLNEFKKI 164 Query: 173 KHVQILRFHSRVPIVDPQRINP---ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 H++ +RFH+R PI+ P RI ++I+ K+ + IH NH EF+EE A+S Sbjct: 165 PHIKFIRFHTRTPIILPSRITENFCKIIENFKKDFLQINFIIHVNHSQEFNEENKVALSL 224 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L LLSQSVLLKG+N+ + L L+ ++L I+PYYLHHPD G HF LT+EE Sbjct: 225 LHAHCSNLLSQSVLLKGVNNSKQALLKLIDELIKLNIRPYYLHHPDKVKGGLHFMLTLEE 284 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 G+ + A+L+ + G P YI+D+PGG GKV Sbjct: 285 GRNLYATLRNHLPGWALPQYIIDIPGGEGKV 315 >gi|289432513|ref|YP_003462386.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT] gi|288946233|gb|ADC73930.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT] Length = 439 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q IP EL Sbjct: 65 VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQLIPDTAEL 124 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+ G V + Sbjct: 125 CFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R +R P+V Sbjct: 184 QAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRIGTRYPVV 243 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +QSVLLKGI Sbjct: 244 LPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQSVLLKGI 302 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND + L + +++PYYL D GT HF IE G I+ L+ SGL P Sbjct: 303 NDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYTSGLAVP 362 Query: 308 FYILDLPGGYGKVKI 322 Y++DLPGG GK+ I Sbjct: 363 NYVIDLPGGGGKITI 377 >gi|147669246|ref|YP_001214064.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1] gi|146270194|gb|ABQ17186.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1] Length = 439 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 124/315 (39%), Positives = 182/315 (57%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q IP EL Sbjct: 65 VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQLIPDTAEL 124 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+ G V + Sbjct: 125 CFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKRE-WKNGGWVHT 183 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R +R P+V Sbjct: 184 QAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRIGTRYPVV 243 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +QSVLLKGI Sbjct: 244 LPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQSVLLKGI 302 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND + L + +++PYYL D GT HF IE G I+ L+ SGL P Sbjct: 303 NDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGYTSGLAVP 362 Query: 308 FYILDLPGGYGKVKI 322 Y++DLPGG GK+ I Sbjct: 363 NYVIDLPGGGGKITI 377 >gi|256846428|ref|ZP_05551885.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2] gi|256718197|gb|EEU31753.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2] Length = 425 Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 119/340 (35%), Positives = 196/340 (57%), Gaps = 2/340 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q IP +E+ Sbjct: 30 LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQAIPTIQEI 89 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS + Sbjct: 90 HQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPM 149 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R SR P+V Sbjct: 150 DR-IDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRIGSRTPVV 208 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q+VLL+G+ Sbjct: 209 LPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQTVLLRGV 267 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ SG P Sbjct: 268 NDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVP 327 Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +++D PGG GK + + G + + ++ Y Sbjct: 328 TFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367 >gi|229172992|ref|ZP_04300544.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3] gi|228610512|gb|EEK67782.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3] Length = 473 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 125/347 (36%), Positives = 200/347 (57%), Gaps = 4/347 (1%) Query: 7 TLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 T+ + DL NLI +E+ + +K + + +TP A L+NP +P PI Q +P E Sbjct: 36 TIKTLDDLKKVINLIPEEE-EGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQSVPISE 94 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G Sbjct: 95 ELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMG 153 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P Sbjct: 154 VPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRIGTRAP 213 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q+V+L Sbjct: 214 VVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQAVILA 272 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 273 GINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYA 332 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + + + ++ YP S Sbjct: 333 VPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|34763498|ref|ZP_00144440.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741285|ref|ZP_04571766.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13] gi|294784507|ref|ZP_06749796.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27] gi|27886827|gb|EAA23958.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229430817|gb|EEO41029.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13] gi|294487723|gb|EFG35082.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27] Length = 425 Score = 232 bits (592), Expect = 5e-59, Method: Compositional matrix adjust. Identities = 119/340 (35%), Positives = 196/340 (57%), Gaps = 2/340 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q IP +E+ Sbjct: 30 LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQAIPTIQEI 89 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS + Sbjct: 90 HQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPM 149 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R SR P+V Sbjct: 150 DR-IDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRIGSRTPVV 208 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q+VLL+G+ Sbjct: 209 LPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQTVLLRGV 267 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ SG P Sbjct: 268 NDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVP 327 Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +++D PGG GK + + G + + ++ Y Sbjct: 328 TFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367 >gi|289524159|ref|ZP_06441013.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502815|gb|EFD23979.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 442 Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 115/286 (40%), Positives = 180/286 (62%), Gaps = 2/286 (0%) Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 +A+TP A L++P++ N PI Q +P E N E+ DP+ ++ ++P+ G VHRYPDR Sbjct: 58 MAITPYYATLMDPNDINCPIRMQAVPTSAERNTAEEDFHDPLAEDRYAPVPGFVHRYPDR 117 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L + C +YCRFC RR G + S ++ +AA+ YI+ + +++ TGGDPL Sbjct: 118 GILLVTDQCSMYCRFCTRRRFAG-EIDRPKSREEIQAAIDYIERTPVLRDILVTGGDPLT 176 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + + L+ +L +LR I HV+I+R +RVP V PQRI L+ LK+ P++I +H NHP Sbjct: 177 MEDENLEWLLTSLRRIPHVEIIRIGTRVPAVMPQRITNSLVTMLKKF-HPLWINVHFNHP 235 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + + A++ LANAGI L +QSVLL+GIND P I L + R++PYY++ DL Sbjct: 236 KEITPHSARALNMLANAGIPLGNQSVLLRGINDCPYIFKELFHKLLVNRVRPYYIYQCDL 295 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + G SHFR ++ +G +I+ L+ +G+ P +++D PGG GK+ + Sbjct: 296 SRGISHFRTSVGKGIEIIEFLRGHTTGMAVPTFVIDAPGGGGKIPV 341 >gi|95931361|ref|ZP_01314073.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] gi|95132577|gb|EAT14264.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] Length = 345 Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust. Identities = 128/321 (39%), Positives = 184/321 (57%), Gaps = 6/321 (1%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 + ++ Y + +TP LI +DP+ Q IP EL + DP+ + SP+ Sbjct: 29 LAQVVERYPMRITPHQFELIR--QADDPLGCQVIPDPREL-LDDSLLVDPLNEEQLSPVP 85 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 +VHRYP R+LL + C YCRFC R+ VG +V S D + YI E ++ EV Sbjct: 86 HLVHRYPYRVLLLVAGSCFSYCRFCTRKRKVGCSSMSV-SLGDILKGIDYIAEHPEVNEV 144 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 I +GGDPL +S + L VL L I H+Q++R SR P+V P+RI L L+ +PV Sbjct: 145 ILSGGDPLTMSDRLLDDVLARLSRIPHLQVVRIGSRAPVVMPERITDALCALLRRY-QPV 203 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 Y H NHP E +E + A RL +G+I+ +Q+VLL+G+ND+ E L L T L+I+ Sbjct: 204 YFLTHFNHPREITEATVEACQRLVRSGVIVANQTVLLRGVNDNSETLFKLFHTLYRLQIR 263 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327 PYYLH DL GTSHFR +E+G I+ L+ +SGL P YI+DLPGG+GKV + + Sbjct: 264 PYYLHQMDLTCGTSHFRTRLEDGIAIMDDLRGPLSGLAVPSYIVDLPGGHGKVPVTPDYV 323 Query: 328 KKVGNGSYCITDHHNIVHDYP 348 +++G+ + +V DYP Sbjct: 324 QRLGDHARLRAADGTLV-DYP 343 >gi|226315087|ref|YP_002774983.1| lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599] gi|226098037|dbj|BAH46479.1| probable lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599] Length = 454 Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 117/348 (33%), Positives = 202/348 (58%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + E+ + ++ + + +TP A+L++P +P+DP+ Q Sbjct: 30 WQLTH-TIKTVDDLKQVINLTPEEEEGVRISTQTIPLNITPYYAHLMDPDDPSDPVRMQS 88 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 89 VPLSSEMVRTKYDMEDPLHEDTDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 147 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +A + YI+ + ++ +V+ +GGD L+++ + L+ ++ +LR I HV+I+R Sbjct: 148 QIGMGVPKKQLDACIDYIRSRPEVRDVLLSGGDGLLINDRVLEYIISSLRDIPHVEIIRI 207 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L LK+ PV++ H NHP E + EA A LANAG+ L +Q Sbjct: 208 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNHPKEITPEAKLACEMLANAGVPLGNQ 266 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND + L++ V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 267 AVILAGINDCANTMKKLVQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGIEIIEHLRGH 326 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P +++D P G GK+ + + I + + + ++ YP Sbjct: 327 TSGYAVPTFVVDAPHGGGKIPVSPNYIISQASDKVVLRNFEGVITSYP 374 >gi|325281770|ref|YP_004254312.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712] gi|324313579|gb|ADY34132.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712] Length = 416 Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 126/321 (39%), Positives = 195/321 (60%), Gaps = 4/321 (1%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 I+E +A+TP +LI+P NP PI +Q +P EEL+ P + EDP+ ++ SP+ Sbjct: 48 IRESLKTLRMAITPYYLSLIDPDNPYCPIRKQSVPTIEELHRSPADLEDPLHEDGDSPVP 107 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWE 146 G+ HRYPDR+L + +C +YCR C RR G T L D + YI Q+ + Sbjct: 108 GLTHRYPDRVLFLITDMCSMYCRHCTRRRFAGHHDCATPLERID--KCIEYIANTPQVRD 165 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 V+ +GGD L++S +RL+ ++K LR I HV+I+R SR P+V PQRI PEL+ L++ P Sbjct: 166 VLLSGGDALLVSDERLEYIIKRLRGIPHVEIIRIGSRTPVVLPQRITPELVNMLRKY-HP 224 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 +++ H NHP E +EE+ AA +RLA+AGI L +QSVLL+GIND ++ L+ V++R+ Sbjct: 225 IWLNTHFNHPNEITEESAAACARLADAGIPLGNQSVLLRGINDCTHVMKKLVHELVKIRV 284 Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 +PYY++ DL+ G HFR + +G +I+ +L+ SG P +++D PGG GK+ + Sbjct: 285 RPYYIYICDLSVGIGHFRTPVSKGIEIIENLRGHTSGYAVPTFVVDAPGGGGKIPVMPTY 344 Query: 327 IKKVGNGSYCITDHHNIVHDY 347 + G + + +V Y Sbjct: 345 LISQGPNRVVLRNFEGVVTTY 365 >gi|288817647|ref|YP_003431994.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6] gi|288787046|dbj|BAI68793.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6] gi|308751245|gb|ADO44728.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobacter thermophilus TK-6] Length = 367 Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 119/313 (38%), Positives = 191/313 (61%), Gaps = 1/313 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 L + +D+ + E+++ I+ Y +A+TP +LI P +PNDPI Q IP++EE+ Sbjct: 24 LKTREDIQKYIKLLPEEVEGIERTKGIYPLAITPHYFSLIEPEDPNDPIRLQCIPRREEV 83 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + + +P + G+ HRY DR+LL + C VYCR C R+ + +Q S Sbjct: 84 DENAQRLGEPDPFREEGQVPGLTHRYRDRVLLSVTTFCAVYCRHCMRKRIF-AQGERSRS 142 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 +++ + YI+E +I +V+ +GG+PL LS+++L+ +L LR IKHV+I+RF +R+ ++ Sbjct: 143 TEELRKMIEYIKEHEEIRDVLISGGEPLSLSYEKLEYLLSQLRKIKHVEIIRFGTRLLVL 202 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQR + + E P++I H NHP E +EEA A+ RL GI + +Q+VLLKG+ Sbjct: 203 APQRFFDNKLLDILEKYSPIWINTHFNHPKEITEEAEEAVERLLRRGIPINNQTVLLKGV 262 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND+P+ + L R + +++KP YL H D G HFR +I++G +I+ L+ +ISG+ P Sbjct: 263 NDNPQTMLELFRGLLRIKVKPQYLFHCDPVKGAVHFRTSIDKGLEIMEYLRGRISGMGIP 322 Query: 308 FYILDLPGGYGKV 320 Y +DLPGG GKV Sbjct: 323 TYAVDLPGGKGKV 335 >gi|2529467|gb|AAB81159.1| YokS [Bacillus subtilis subsp. subtilis str. 168] Length = 471 Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust. Identities = 117/348 (33%), Positives = 204/348 (58%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ S + G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSRVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P +++D PGG GK+ + + + + + ++ YP Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYP 375 >gi|13471862|ref|NP_103429.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099] gi|14022606|dbj|BAB49215.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099] Length = 367 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 129/315 (40%), Positives = 182/315 (57%), Gaps = 3/315 (0%) Query: 34 HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93 H+ + +LI+ ++P DPI Q IP +EL E DPI D++ SP+ + HR+ Sbjct: 49 HHKVRAPKAYLDLIDWNDPADPIRAQVIPSPDELEEAEGELGDPIADHDFSPVPRLTHRH 108 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 DR+LL + C VYCRFCFR+E + S G + + E ALAYI + +I EVI TGGD Sbjct: 109 TDRVLLFPTYQCAVYCRFCFRKESLTS-IGRGYTREALEPALAYIADHPEIREVILTGGD 167 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL L K L +++ + I HV++LR H+RVP+ P RI L+ L + V + H Sbjct: 168 PLSLPDKALAEIVARIEAIPHVRLLRIHTRVPVALPSRITSGLVAAL-QGRLMVTVVTHF 226 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272 NH E + A + AG +LL+QSVLLKG+ND E+L L R + L +KPYYLH Sbjct: 227 NHAREITPATEVACRTMRQAGFVLLNQSVLLKGVNDTVEVLEELCRELMYRLGVKPYYLH 286 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332 H DLA G +H R TI +GQ +V +L+ ++SG+C P Y+LDLP G GKV + I+ Sbjct: 287 HGDLARGMAHRRTTIAQGQALVEALRARLSGICNPVYVLDLPEGGGKVPLGPCPIEGREG 346 Query: 333 GSYCITDHHNIVHDY 347 ++ I + Y Sbjct: 347 DTWRIRGQDGAMRTY 361 >gi|150399966|ref|YP_001323733.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii SB] gi|150012669|gb|ABR55121.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii SB] Length = 433 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 118/322 (36%), Positives = 198/322 (61%), Gaps = 3/322 (0%) Query: 27 EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85 EI++ + +++TP A+LI+ N DPI +Q + K+EL + E EDP+ ++ SP Sbjct: 57 EIQKAIEVFPMSITPYYASLIDISNLKKDPIYKQSVASKKELIMEDFEMEDPLAEDKDSP 116 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 + GI HRYPDR+L + C +YCR C R+ V S+ + S ++ + A+ YI+E ++ Sbjct: 117 VIGITHRYPDRVLFYVNPNCAMYCRHCTRKRKV-SESESNPSKEEIQKAIDYIKEHPEVR 175 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +V+ +GGDPL+LS L +L + I+HV+++R SRVP+V PQRI L+ LK+ Sbjct: 176 DVLLSGGDPLLLSDDYLDWILSEISSIEHVELIRIGSRVPVVLPQRITDNLVNILKKY-H 234 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 P+++ H NH E ++ ++ A+ +L+NAGI + +Q+VLL G+ND P ++ L + V R Sbjct: 235 PIWVNTHFNHVVEITDTSVEALDKLSNAGIPIGNQTVLLSGVNDCPYVMRKLNQKLVSSR 294 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++PYYL+ DL+ G SHFR +I +G +I+ SL +G P Y++D PGG GK+ + + Sbjct: 295 VRPYYLYQCDLSKGISHFRTSISKGLEIIESLIGHTTGFAVPRYVVDAPGGGGKIPVMPN 354 Query: 326 NIKKVGNGSYCITDHHNIVHDY 347 + G+ + ++ ++ Y Sbjct: 355 YVVSWGSDRVILRNYEGVITTY 376 >gi|160902541|ref|YP_001568122.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95] gi|160360185|gb|ABX31799.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95] Length = 436 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 122/347 (35%), Positives = 201/347 (57%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLR++ +T + L + E+ IK +A+TP A L++P NP PI RQ Sbjct: 26 WQLRNR-ITDVEKLRQIINLTPEEEQGIKNTLKTLRMAITPYFATLMDPDNPKCPIRRQA 84 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EL P ++ DP+ ++ SP G+ HRYPDR+L + +C +YCR C RR G Sbjct: 85 VPSSKELIKGPWDQIDPLHEDADSPAPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 143 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + + +A+L YI++ Q+ +V+ +GGD L+ L+ +L L+ I HV+++R Sbjct: 144 QTDSNRKRNEIDASLQYIRDTPQVRDVLLSGGDALMAGIPILEYILSELKKIPHVEVVRI 203 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+V PQ I L+ LK+ P+++ NHP E + E+ A +LA+AGI L +Q Sbjct: 204 GTRVPVVFPQLITDNLVNVLKKY-HPLWLNTQFNHPKEITPESAEACRKLADAGIPLGNQ 262 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND I+ L+ V++R++PYYL+ DL+ G HFR ++ +G +I+ SL Sbjct: 263 SVLLRGVNDSKYIIMELVHELVKIRVRPYYLYQCDLSQGIEHFRTSVSKGIEIMESLIGH 322 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK++I + + + + ++ ++ Y Sbjct: 323 TSGFAIPEFVVDAPGGGGKIRIMPNYLISQNKDTVILRNYEGVISTY 369 >gi|311030470|ref|ZP_07708560.1| L-lysine 2,3-aminomutase [Bacillus sp. m3-13] Length = 473 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 120/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + +DL + E+ + +K + + +TP A+L+NP +P PI Q +P +E Sbjct: 36 TIRTLEDLKQVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISKE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 IYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K +AA+AYI QI + + +GGD L+++ + L+ +LK LR I H++I+R +R P+ Sbjct: 155 PKKQLDAAIAYIASNDQIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L LK+ PV++ H N E +EE+ A L NAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKLACEMLVNAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D PGG GK+ + + I + + ++ YP Sbjct: 334 PTFVVDAPGGGGKIAVQPNYIISQSANKVVLRNFEGVITTYP 375 >gi|307353610|ref|YP_003894661.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus petrolearius DSM 11571] gi|307156843|gb|ADN36223.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus petrolearius DSM 11571] Length = 437 Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust. Identities = 118/300 (39%), Positives = 181/300 (60%), Gaps = 5/300 (1%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDN 81 E+ +E+KE + +A+TP +LI + NDPI Q P EL+I+ E+ DP+ ++ Sbjct: 52 EKYEELKETLEKFPLAITPYYLSLIETEDYENDPIFMQSFPSVHELDIIEEDLADPLDED 111 Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQE 140 SP++GI HRYPDR+L + + C +YCR C R+ VG + + KD + YI Sbjct: 112 RDSPVEGITHRYPDRVLFLVSNKCAMYCRHCTRKRKVGDVE--YIPDKDQISKGIDYINN 169 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 Q+ +V+ +GGDPL+L L+ +L L I HV+I+R SR+P+V P RI+ L++ L Sbjct: 170 NPQVRDVLLSGGDPLLLDDSYLEWILSELTEIPHVEIVRIGSRLPVVLPYRIDSNLVEML 229 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 ++ P++ NHP E + + A+ +LA+ GI L +QSVLL G+ND P I+ LM Sbjct: 230 RQY-HPIWFNTQFNHPREITSSSTEALRKLADGGIPLGNQSVLLSGVNDCPRIMKTLMHK 288 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 V R++PYY++ DL+ G SHFR + +G +I+ SL+ SG P Y++D PGG GK+ Sbjct: 289 LVMNRVRPYYMYQCDLSEGLSHFRTPVGKGIEIIESLRGHTSGFAVPTYVIDAPGGGGKI 348 >gi|237743425|ref|ZP_04573906.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1] gi|260494967|ref|ZP_05815096.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33] gi|229433204|gb|EEO43416.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1] gi|260197410|gb|EEW94928.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33] Length = 425 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 117/310 (37%), Positives = 187/310 (60%), Gaps = 2/310 (0%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72 DL + E+ + +KE +A+TP +LI+ + PI +Q IP +E++ Sbjct: 35 DLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQAIPTIQEIHQSDA 94 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS + + + Sbjct: 95 DLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-ID 153 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 A+ YI + Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R SR P+V PQRI Sbjct: 154 KAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRIGSRTPVVLPQRI 213 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q+VLL+G+ND Sbjct: 214 TPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQTVLLRGVNDSVP 272 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D Sbjct: 273 VMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVD 332 Query: 313 LPGGYGKVKI 322 PGG GK + Sbjct: 333 APGGGGKTPV 342 >gi|291286787|ref|YP_003503603.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio acetiphilus DSM 12809] gi|290883947|gb|ADD67647.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio acetiphilus DSM 12809] Length = 438 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 120/351 (34%), Positives = 208/351 (59%), Gaps = 8/351 (2%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q RH KT+ +D+ N + +E+ E+K + +A+TP A+LI+ N +DP+ Sbjct: 29 WQFRHTIKTVEDFEDVLNISFSPEEK-KEMKITLRKFPMAITPYYASLIDIENYKDDPVF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q EEL++ E DP+ +++ SP++ + HRYPDR+L + ++C +YCR C R+ Sbjct: 88 KQSCCSTEELHVESYEMGDPLAEDSDSPVENLTHRYPDRVLFHVSNMCAMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTE-AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 VG Q + +KD+ L YI+E ++ +V+ +GGDP +LS ++ +L + I+HV+ Sbjct: 148 VGDQDH--IPAKDSLIKGLEYIREHEEVRDVLLSGGDPFMLSDSAIEWLLDEISSIEHVE 205 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 ++R +R+P+V P RI +LI L + ++I H NHP E ++ + A+ +L AGI Sbjct: 206 VIRIGTRMPVVLPYRITEDLIDILSKYDN-LWINTHFNHPRELTDSSRQALKKLVKAGIP 264 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 + +Q+VLL G+ND P I+ +LM V+ R++PYY++ DL+ G SHFR + +G +I+ S Sbjct: 265 MGNQTVLLAGVNDCPYIMKSLMHKLVKNRVRPYYIYQCDLSEGLSHFRTPVSKGIEIIES 324 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 L+ SG P Y++D PGG GK+ + + + + ++ ++ Y Sbjct: 325 LRGHTSGFAVPTYVIDAPGGGGKIPVTPNYVVSYATNKVILRNYEGVICTY 375 >gi|118580185|ref|YP_901435.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus DSM 2379] gi|118502895|gb|ABK99377.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379] Length = 346 Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 123/316 (38%), Positives = 187/316 (59%), Gaps = 6/316 (1%) Query: 18 NLIKKEQID-EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED 76 N+ KK I E ++ Y ++P A LI D I +Q IP EL+ + D Sbjct: 13 NITKKSTIAAEFTSVAASYPFRVSPSYAKLIR--REGDAIWKQCIPDLRELDD-AGQCPD 69 Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 P+ ++ SP+ G++HRYPDR++L + + CPVYCRFC R+ VG + + ++ + A+ Sbjct: 70 PLAEHLLSPVPGLIHRYPDRVVLLVSNRCPVYCRFCMRKRHVG-EGDAPMDAQTLKQAMD 128 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196 YI I ++I +GGDPL+L L +L+ LR I HV I+R +RVP+ P+R+ PEL Sbjct: 129 YIAANPAIRDIILSGGDPLMLDDDSLHHILQQLRAIPHVTIIRIGTRVPVTLPERVTPEL 188 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 LK P+YI H NHP E + + A LA+AGI L +Q+VLL+G+ND + + + Sbjct: 189 CTLLKRF-HPLYINTHFNHPDEITPLSARACDLLADAGIPLGNQTVLLRGVNDSLDTMRS 247 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L + LR++PYY+H DL GT+HFR I G +I+ L+ +SG+ P Y++DLP G Sbjct: 248 LQTGLLSLRVRPYYIHQMDLVRGTAHFRTPIATGLEIIRGLRGHVSGMAVPQYVIDLPDG 307 Query: 317 YGKVKIDTHNIKKVGN 332 GKV I ++++ G+ Sbjct: 308 KGKVPILPDDVERQGD 323 >gi|253582165|ref|ZP_04859388.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium ATCC 27725] gi|251835704|gb|EES64242.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium ATCC 27725] Length = 382 Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust. Identities = 112/303 (36%), Positives = 188/303 (62%), Gaps = 2/303 (0%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + E+ + +K+ +A+TP +L++ ++PN P+ +Q IP +E++ + DP+ Sbjct: 9 LSAEEEEGVKKTLETLRMAITPYYFSLMDINDPNCPVRKQAIPSIKEIHKAEADLLDPLH 68 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G+ + + + A+ YI Sbjct: 69 EDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGANDDAMPMDR-IDKAIEYIA 127 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R SR P+V PQRI PEL++ Sbjct: 128 KTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRIGSRTPVVLPQRITPELVEM 187 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 LK+ P+++ H NHP E + E+ A +ANAGI L +QSVLL+GIND ++ L+ Sbjct: 188 LKKY-HPIWLNTHFNHPKEVTPESKKACELMANAGIPLGNQSVLLRGINDCVHVMKRLVH 246 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 V++R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D PGG GK Sbjct: 247 DLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGK 306 Query: 320 VKI 322 + Sbjct: 307 TPV 309 >gi|19705171|ref|NP_602666.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328274|ref|ZP_06870803.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19713110|gb|AAL93965.1| Lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154578|gb|EFG95366.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 425 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 116/315 (36%), Positives = 189/315 (60%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q IP +E+ Sbjct: 30 LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQAIPTIQEI 89 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS + Sbjct: 90 HQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPM 149 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + + A+ YI + Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R SR P+V Sbjct: 150 DR-IDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRIGSRTPVV 208 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q+VLL+GI Sbjct: 209 LPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQTVLLRGI 267 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ SG P Sbjct: 268 NDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVP 327 Query: 308 FYILDLPGGYGKVKI 322 +++D PGG GK + Sbjct: 328 TFVVDAPGGGGKTPV 342 >gi|256026982|ref|ZP_05440816.1| lysine 2,3-aminomutase [Fusobacterium sp. D11] gi|289764966|ref|ZP_06524344.1| lysine 2,3-aminomutase [Fusobacterium sp. D11] gi|289716521|gb|EFD80533.1| lysine 2,3-aminomutase [Fusobacterium sp. D11] Length = 425 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 117/310 (37%), Positives = 186/310 (60%), Gaps = 2/310 (0%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72 DL + E+ + +KE +A+TP +LI+ + PI +Q IP +E+ Sbjct: 35 DLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQAIPTIQEIYQSDA 94 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS + + + Sbjct: 95 DLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-ID 153 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 A+ YI + Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R SR P+V PQRI Sbjct: 154 KAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRIGSRTPVVLPQRI 213 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q+VLL+G+ND Sbjct: 214 TPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQTVLLRGVNDSVP 272 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D Sbjct: 273 VMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVD 332 Query: 313 LPGGYGKVKI 322 PGG GK + Sbjct: 333 APGGGGKTPV 342 >gi|126652300|ref|ZP_01724476.1| KamA [Bacillus sp. B14905] gi|126590875|gb|EAZ84988.1| KamA [Bacillus sp. B14905] Length = 462 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 121/342 (35%), Positives = 197/342 (57%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + +E+ + +K + +TP A+L+NP + PI Q +P E Sbjct: 37 TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQSVPLSAE 96 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + + EDP+ ++ SP+ GI HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 97 IMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QVGMAV 155 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+ YI+ +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R +R P+ Sbjct: 156 PKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRIGTRAPV 215 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI EL LK+ PV++ H N E ++EA A +L NAG+ + +QSV+L G Sbjct: 216 VFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQSVILTG 274 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ L+ V++R++PYY++ DL+ G SHFR I +G +I+ SL+ SG Sbjct: 275 INDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGHTSGYAV 334 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D P G GK+ + + I + ++ ++ YP Sbjct: 335 PTFVVDAPNGGGKIALQPNYILSQSPEKVVLRNYEGVISSYP 376 >gi|169828773|ref|YP_001698931.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41] gi|168993261|gb|ACA40801.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41] Length = 462 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 121/342 (35%), Positives = 197/342 (57%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + +E+ + +K + +TP A+L+NP + PI Q +P E Sbjct: 37 TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQSVPLSAE 96 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + + EDP+ ++ SP+ GI HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 97 IMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QVGMAV 155 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+ YI+ +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R +R P+ Sbjct: 156 PKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRIGTRAPV 215 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI EL LK+ PV++ H N E ++EA A +L NAG+ + +QSV+L G Sbjct: 216 VFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQSVILTG 274 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ L+ V++R++PYY++ DL+ G SHFR I +G +I+ SL+ SG Sbjct: 275 INDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGHTSGYAV 334 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D P G GK+ + + I + ++ ++ YP Sbjct: 335 PTFVVDAPNGGGKIALQPNYIISQSPEKVVLRNYEGVISSYP 376 >gi|205373143|ref|ZP_03225947.1| lysine 2,3-aminomutase [Bacillus coahuilensis m4-4] Length = 468 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 116/342 (33%), Positives = 201/342 (58%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + +K + + +TP A L+N ++P PI Q +P +E Sbjct: 36 TIRTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNKNDPRCPIRMQSVPLGQE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 IHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+ YI++ I +V+ +GGD L+++ + L+ ++K+LR I H++I+R +R P+ Sbjct: 155 PKKQIDRAIQYIKDNDGIRDVLLSGGDALLINDQVLEYIIKSLREIPHIEIIRLGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI +L+ LK+ PV++ H N E ++EA A +L NAG+ + +Q+V+L G Sbjct: 215 VFPQRITDKLVGILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+ SG Sbjct: 274 INDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D PGG GK+ + + + G+ + + ++ YP Sbjct: 334 PAFVVDAPGGGGKITLQPNYLLAQGSKHVVLRNFEGVITTYP 375 >gi|89097814|ref|ZP_01170701.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911] gi|89087316|gb|EAR66430.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911] Length = 495 Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 117/342 (34%), Positives = 199/342 (58%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + +DL + E+ + +K + + +TP A+L+NP +P P+ Q +P +E Sbjct: 60 TIRNLEDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQSVPISQE 119 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 120 IHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 178 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+AYI+ ++ +V+ +GGD L+++ K L+ +LK LR I HV+I+R +R P+ Sbjct: 179 PKKQLDDAIAYIRNTPEVRDVLISGGDGLLINDKILEYILKNLREIDHVEIIRIGTRAPV 238 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L LK+ P+++ H N E +EEA A LA+AG+ + +Q+V+L G Sbjct: 239 VFPQRITENLCNILKKY-HPIWLNTHFNTSIEITEEAKKACEMLADAGVPVGNQAVILAG 297 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 298 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 357 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D PGG GK+ + + + + + ++ YP Sbjct: 358 PTFVVDAPGGGGKIALQPNYLISQSAEKTVLRNFEGVITTYP 399 >gi|319651187|ref|ZP_08005318.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2] gi|317397116|gb|EFV77823.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2] Length = 476 Score = 229 bits (585), Expect = 3e-58, Method: Compositional matrix adjust. Identities = 117/342 (34%), Positives = 197/342 (57%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + ++ + ++ + + +TP A+L+NP +P PI Q +P +E Sbjct: 36 TIRTVDDLKKVINLTPDEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPISKE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 IYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K +AA++YI+ Q+ +V+ +GGD L+++ L+ +LK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDAAISYIRSAPQVRDVLISGGDGLLINDNILEYILKNLREIDHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L LK+ PV++ H N E +E++ A LANAG+ + +QSV+L G Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEDSKRACEMLANAGVPVGNQSVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D PGG GK+ + + + + + ++ YP Sbjct: 334 PTFVVDAPGGGGKISLQPNYLISQSADKVVLRNFEGVITTYP 375 >gi|220916509|ref|YP_002491813.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954363|gb|ACL64747.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 402 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 119/332 (35%), Positives = 178/332 (53%), Gaps = 2/332 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH LT+A D + + + H +A TP A+L++ +P PI Q Sbjct: 20 WQQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQV 78 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S Sbjct: 79 MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ +P R+ + + P+++ H NHP E + EA A RL + G+ + +Q Sbjct: 199 ATRAPVTNPMRVT-DALAAALRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++ + Sbjct: 258 SVLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGR 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332 SGL P +DLPGG GKV + + G Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGE 349 >gi|295706131|ref|YP_003599206.1| KamA family protein [Bacillus megaterium DSM 319] gi|294803790|gb|ADF40856.1| KamA family protein [Bacillus megaterium DSM 319] Length = 470 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 117/346 (33%), Positives = 197/346 (56%), Gaps = 2/346 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + ++ + + +TP A+L+NP +P P+ Q +P +E Sbjct: 36 TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQSVPVGKE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K +AA+AYI + ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L L++ PV++ H N E +EE A L +AG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + I + + ++ YP S Sbjct: 334 PTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379 >gi|294500786|ref|YP_003564486.1| KamA family protein [Bacillus megaterium QM B1551] gi|294350723|gb|ADE71052.1| KamA family protein [Bacillus megaterium QM B1551] Length = 470 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 117/346 (33%), Positives = 197/346 (56%), Gaps = 2/346 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + ++ + + +TP A+L+NP +P P+ Q +P +E Sbjct: 36 TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQSVPVGKE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K +AA+AYI + ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L L++ PV++ H N E +EE A L +AG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + I + + ++ YP S Sbjct: 334 PTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379 >gi|289548297|ref|YP_003473285.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM 14484] gi|289181914|gb|ADC89158.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM 14484] Length = 367 Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust. Identities = 120/313 (38%), Positives = 192/313 (61%), Gaps = 6/313 (1%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN--ILPEEREDPIGD 80 E+ + I+ Y +A+TP +LI+PH+P DPI Q IP+ E + + ED + + Sbjct: 39 EEEEGIRRTQGLYPMAITPYYLSLIDPHDPQDPIRLQAIPRAIETDPYVQSYGEEDALRE 98 Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 P + HRYPDR+L+++ C VYCR C R+ + SQ ++ ++ + + YI+ Sbjct: 99 EGQIP--HMTHRYPDRVLVRVTTFCAVYCRHCMRKRIF-SQGERSITKEEIDTIIQYIEA 155 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 + +V+ +GGDPL LS+++L+ +L LR I HV+I+R +R+P++ PQR E + L Sbjct: 156 HPSVRDVLLSGGDPLSLSYEKLEYILSRLRRIPHVEIIRIGTRLPVLAPQRFFDEKLLKL 215 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 E P++I H NHP E + A A+ L GI + +Q+VLLKG+NDDP+++ LMR+ Sbjct: 216 LERYSPIWINTHFNHPKEITPYAAEAVENLLRHGIPVNNQTVLLKGVNDDPQVMLELMRS 275 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 + +++KP YL H D G HFR ++E+G +I+ L+ KISG+ P Y +DLPGG GKV Sbjct: 276 LLRIKVKPQYLFHCDPIKGAIHFRTSLEKGLEIMDFLRGKISGMGIPTYAVDLPGGKGKV 335 Query: 321 K-IDTHNIKKVGN 332 + ++ ++K GN Sbjct: 336 PLLPSYLVRKEGN 348 >gi|257451624|ref|ZP_05616923.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R] gi|257466940|ref|ZP_05631251.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563] gi|315918082|ref|ZP_07914322.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563] gi|317058188|ref|ZP_07922673.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R] gi|313683864|gb|EFS20699.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R] gi|313691957|gb|EFS28792.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563] Length = 419 Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust. Identities = 119/321 (37%), Positives = 190/321 (59%), Gaps = 3/321 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q+R++ T ANL +E +K + +A+TP +LI+ +PN P+ +Q I Sbjct: 25 QVRNRIETLDDLKQFANLSDEESEGVVKTLET-LRMAITPYYFSLIDLDDPNCPVRKQAI 83 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P +E++ + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G Q Sbjct: 84 PTIQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAG-Q 142 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + + + YI + ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R Sbjct: 143 SDDSMPMERIDRCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRIG 202 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LANAG+ L +QS Sbjct: 203 SRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKKACEMLANAGVPLGNQS 261 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+ND ++ LM V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 262 VLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHT 321 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 SG P +++D PGG GK + Sbjct: 322 SGYAVPTFVVDAPGGGGKTPV 342 >gi|257463416|ref|ZP_05627811.1| lysine 2,3-aminomutase [Fusobacterium sp. D12] gi|317060981|ref|ZP_07925466.1| lysine 2,3-aminomutase [Fusobacterium sp. D12] gi|313686657|gb|EFS23492.1| lysine 2,3-aminomutase [Fusobacterium sp. D12] Length = 419 Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 119/322 (36%), Positives = 195/322 (60%), Gaps = 5/322 (1%) Query: 2 QLRHKTLTSAQDLYN-ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + +DL ANL ++E +K + +A+TP +LI+ +PN P+ +Q Sbjct: 25 QVRNR-IETLEDLKQFANLSEEESEGVVKTLET-LRMAITPYYFSLIDLEDPNCPVRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E++ + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G Sbjct: 83 IPTVQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAG- 141 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + + + + YI + ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R Sbjct: 142 QSDDSMPMERIDKCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKRACEMLADAGVPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND ++ LM V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 SVLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKI 322 SG P +++D PGG GK + Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPV 342 >gi|294783510|ref|ZP_06748834.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA] gi|294480388|gb|EFG28165.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA] Length = 425 Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 112/286 (39%), Positives = 178/286 (62%), Gaps = 2/286 (0%) Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 +A+TP +LI+ ++ P+ +Q IP +E++ + DP+ ++ SP+ G+ HRYPDR Sbjct: 59 MAITPYYFSLIDMNSDRCPVRKQAIPTIQEIHQADADLLDPLHEDEDSPVPGLTHRYPDR 118 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +LL + +C +YCR C RR GS + + + A+ YI + Q+ +V+ +GGD L+ Sbjct: 119 VLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-IDKAIEYIAKTPQVRDVLLSGGDALL 177 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 +S K+L+ ++K LR I HV+I+R SR P+V PQRI PEL LK+ P+++ H NHP Sbjct: 178 VSDKKLESIIKKLREIPHVEIIRIGSRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHP 236 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + EA A LANAG+ L +Q+VLL+GIND ++ L+ V +R++PYY++ DL Sbjct: 237 QEVTPEAKKACEMLANAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDL 296 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + G HFR + +G +I+ L+ SG P +++D PGG GK + Sbjct: 297 SMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPV 342 >gi|78223047|ref|YP_384794.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15] gi|78194302|gb|ABB32069.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15] Length = 344 Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust. Identities = 114/317 (35%), Positives = 186/317 (58%), Gaps = 7/317 (2%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 + Y + +T LI P D I RQ +P EL+ ++ DP+ + SP+ G++ Sbjct: 32 LVRRYPLRITRRYLGLIG--KPGDAIWRQCVPDPCELD--DDQLSDPLDEERLSPVPGVI 87 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 HRYPDR++ + + C VYCRFC R+ VG + + + A+ YI I +VI + Sbjct: 88 HRYPDRVVWLVSNECAVYCRFCMRKRRVGCPLAGS-NGRSGDDAVRYIAATPAIRDVILS 146 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+L +RL+ +L LR I HV+++R +R P+ P+RI L + LK P+Y+ Sbjct: 147 GGDPLLLDDERLEAILARLRAIPHVEMIRIGTRTPVTLPERITARLCRMLKRY-HPLYVN 205 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 H NHP E + EA A +RLA+ GI L +Q+VLL G+ND+P I+ LM+ + +R++PYY Sbjct: 206 THFNHPREITPEATKACARLADTGIPLGNQTVLLAGVNDEPAIMTLLMQRLLAIRVRPYY 265 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330 +H DL GT HFR + G I+ +L+ SG+ P++++D GG GK+ + +++ Sbjct: 266 IHQMDLVRGTGHFRTKVTTGLDIIGALRGHTSGMATPYFVIDAAGGKGKIPLLPDAVERR 325 Query: 331 GNGSYCITDHHNIVHDY 347 G+ ++ + ++ + +Y Sbjct: 326 GD-TWLLRNYRGEIVEY 341 >gi|282164589|ref|YP_003356974.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE] gi|282156903|dbj|BAI61991.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE] Length = 435 Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 122/330 (36%), Positives = 196/330 (59%), Gaps = 16/330 (4%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+RH + + S ++L + +E+ E+++ H+ + +TP +LI+ + NDP+ Sbjct: 29 WQMRHAVRDIPSFEELTGVHF-NREERRELEKTIEHFPLNITPYYLSLIDTADMKNDPVY 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q P EELN+ + DP+ + SP+ GI HRYPDR+L + +VC +YCR C R+ Sbjct: 88 KQCFPSPEELNVEKCDMVDPLAEEEDSPVPGITHRYPDRVLFLVSNVCAMYCRHCTRKRK 147 Query: 118 VGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 VG+ + T+L D YI++ I +V+ +GGDPL+L L +L L I Sbjct: 148 VGNVDYIPDRETILKGID------YIRDNPSIRDVLLSGGDPLMLPDDYLDWILSELDNI 201 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 HV+++R +RVP+V P RI +L++ LK P++I H NHP E + + A+ +LA+ Sbjct: 202 PHVEVVRIGTRVPVVLPCRITDDLVEMLK-GHHPLWINTHFNHPKEVTPASREALRKLAD 260 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AGI L +Q VLL G+ND P+I+ L + V+ R++PYY+ DL+ G SHFR ++ +G + Sbjct: 261 AGIPLGNQCVLLAGVNDCPQIMKKLFQKLVQNRVRPYYMFQCDLSEGLSHFRTSVSKGIE 320 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKI 322 I+ +L SG P Y++D PGG GK+ + Sbjct: 321 IIENLVGHTSGFAVPTYVVDAPGGGGKIPV 350 >gi|197121712|ref|YP_002133663.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K] gi|196171561|gb|ACG72534.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K] Length = 402 Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 119/332 (35%), Positives = 177/332 (53%), Gaps = 2/332 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH LT+A D + + + H +A TP A+L++ +P PI Q Sbjct: 20 WQQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQV 78 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S Sbjct: 79 MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ +P R+ + + P+++ H NHP E + EA A RL + G+ + +Q Sbjct: 199 ATRAPVTNPMRVT-DALAAALRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++ Sbjct: 258 SVLLRGVNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGH 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332 SGL P +DLPGG GKV + + G Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGE 349 >gi|86158969|ref|YP_465754.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775480|gb|ABC82317.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C] Length = 402 Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust. Identities = 119/332 (35%), Positives = 177/332 (53%), Gaps = 2/332 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH L +A D + + + H +A TP A+LI+ +P P+ Q Sbjct: 20 WQQRH-ALATAADFERLFPLTPAERRGFALAAGHTRVAATPYYASLIDRDHPGCPVRLQV 78 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S Sbjct: 79 MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ +P R+ E + P+++ H NHP E + EA A RL + G+ + +Q Sbjct: 199 ATRAPVTNPMRVT-EALAAALRRHAPLFVITHFNHPKECTPEAREACERLVDHGVPVENQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++ + Sbjct: 258 SVLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGR 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332 SGL P +DLPGG GKV + + G Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGE 349 >gi|150400676|ref|YP_001324442.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus Nankai-3] gi|150013379|gb|ABR55830.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus Nankai-3] Length = 437 Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust. Identities = 121/322 (37%), Positives = 188/322 (58%), Gaps = 3/322 (0%) Query: 27 EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85 E++E ++ + +++TP A+LI+ N DPI +Q EEL E DP+ ++ SP Sbjct: 57 ELQEAADVFPLSITPYYASLIDVKNFREDPIFKQSFVGVEELITENFEMADPLAEDKDSP 116 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 + G+ HRYPDRIL + H C VYCR C R+ VG ++ S K E L YI+ QI Sbjct: 117 VPGLTHRYPDRILFYISHACAVYCRHCTRKRKVGDTD-SIPSKKQIEKGLDYIRNNPQIR 175 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +V+ +GGDPL+L L +L L I H++++R +RVP+V P RI EL+ LK+ Sbjct: 176 DVLLSGGDPLLLPDDYLDWILTELWSIPHIEVIRIGTRVPVVLPYRITDELVNMLKKH-H 234 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 P++I H NH E ++ + A+ +LA+ GI L +QSVLL+G+ND P ++ L + R Sbjct: 235 PLWINTHFNHIKEITKSSKNALRKLADVGIPLGNQSVLLRGVNDCPNVIKKLNQKLAANR 294 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++PYYL DL+ G SHFR ++ +G +I+ SL SG P Y++D PGG GK+ + + Sbjct: 295 VRPYYLFQCDLSEGLSHFRTSVRKGVEIIESLIGHTSGFAVPRYVVDAPGGGGKIPVMPN 354 Query: 326 NIKKVGNGSYCITDHHNIVHDY 347 + G + ++ ++ Y Sbjct: 355 YVISWGTDRVILRNYEGVITTY 376 >gi|262066228|ref|ZP_06025840.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693] gi|291380084|gb|EFE87602.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693] Length = 425 Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 113/311 (36%), Positives = 185/311 (59%), Gaps = 2/311 (0%) Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 +A+TP +LI+ ++ P+ +Q IP +E++ + DP+ ++ SP+ G+ HRYPDR Sbjct: 59 MAITPYYFSLIDMNSDRCPVRKQAIPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDR 118 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +LL + +C +YCR C RR GS + + + A+ YI + Q+ +V+ +GGD L+ Sbjct: 119 VLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-IDRAIEYIAKTPQVRDVLLSGGDALL 177 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 +S K+L+ ++K LR I HV+I+R +R P+V PQRI PEL LK+ P+++ H NHP Sbjct: 178 VSDKKLESIIKKLREIPHVEIIRIGTRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHP 236 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + EA A LANAG+ L +Q+VLL+GIND ++ L+ V +R++PYY++ DL Sbjct: 237 QEVTPEAKKACEMLANAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDL 296 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336 + G HFR + +G +I+ L+ SG P +++D PGG GK + + G Sbjct: 297 SMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVV 356 Query: 337 ITDHHNIVHDY 347 + + ++ Y Sbjct: 357 LRNFEGVITTY 367 >gi|302872649|ref|YP_003841285.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor obsidiansis OB47] gi|302575508|gb|ADL43299.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor obsidiansis OB47] Length = 406 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 123/315 (39%), Positives = 200/315 (63%), Gaps = 4/315 (1%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TSA+ L + +++ +I+E++ Y A++P +LI+P +P+ PI +Q +P EL Sbjct: 69 ITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPSCPIKKQSVPSSLEL 128 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G + T S Sbjct: 129 --IEKGELDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG-ETDTHAS 185 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R +R P+ Sbjct: 186 LDDITDAIEYVAKNPHIRDVLITGGDALLLSDEILEWILRSLRQIPHVEIIRIGTRAPVT 245 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI EL+ LK+ P+YI H NHP E ++E+ A L++AG+ L +Q VLL G+ Sbjct: 246 LPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLSDAGVPLGNQMVLLNGV 304 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 N+D I+ L + +++R+KPYY+ HP GTSHF + IEEG +I+ SL+ + SG+ P Sbjct: 305 NNDKYIVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVAIEEGIEIIESLRGRTSGMAVP 364 Query: 308 FYILDLPGGYGKVKI 322 YI++ P G GK I Sbjct: 365 TYIVNAPKGKGKTPI 379 >gi|89896773|ref|YP_520260.1| hypothetical protein DSY4027 [Desulfitobacterium hafniense Y51] gi|219667394|ref|YP_002457829.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium hafniense DCB-2] gi|89336221|dbj|BAE85816.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537654|gb|ACL19393.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium hafniense DCB-2] Length = 413 Score = 228 bits (581), Expect = 9e-58, Method: Compositional matrix adjust. Identities = 136/349 (38%), Positives = 199/349 (57%), Gaps = 6/349 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + A++L + +Q EI E+ Y A++P +LI+ +P DPI Q Sbjct: 68 WQLKNR-IQDAENLSTLLPLTPKQRHEINEVGKAYRWAVSPYYLSLIDKDDPQDPIRLQS 126 Query: 61 IPQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P EE IL + E DP+G+ SP I RYPDR+++ + ++C +YCR C RR +G Sbjct: 127 LPSVEE--ILDDSGEADPMGEEYTSPAPCITRRYPDRLIINVTNLCAMYCRHCQRRRNIG 184 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + + EAAL YI+ +I +V+ TGGD L+LS + L +L L IKHV+I R Sbjct: 185 -EIDLHETRANLEAALDYIRSNPEIRDVLVTGGDALLLSDQMLDWLLGELHEIKHVEIKR 243 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +RVP+ P RI EL L E P+YI NHP E +EE A RL AG+IL + Sbjct: 244 IGTRVPVTLPMRITDELCAIL-EKYPPLYINTQFNHPQEVTEETKKAADRLIKAGVILGN 302 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLKGIND PEI+ L + +++R++PYY+ H GTSHF I++G +I+ +L+ Sbjct: 303 QAVLLKGINDQPEIMKRLNQELLKIRVRPYYIFHAKNVKGTSHFIPRIQDGLRIMENLRG 362 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SGL P YI++ PGG GK I + + + I V YP Sbjct: 363 YTSGLAIPTYIINAPGGGGKTPILPQYLISLNDEEAVIRTWEGKVVHYP 411 >gi|317152560|ref|YP_004120608.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio aespoeensis Aspo-2] gi|316942811|gb|ADU61862.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio aespoeensis Aspo-2] Length = 437 Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 118/314 (37%), Positives = 186/314 (59%), Gaps = 3/314 (0%) Query: 35 YSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93 + +A+TP +LI+ + NDP+ Q P EEL I + DP+ ++ SP+ GI HRY Sbjct: 64 FPMAVTPYYLSLIDVDDYANDPVFLQSFPSPEELKIGRYDMTDPLHEDEDSPVPGITHRY 123 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 PDR+L + + C +YCR C R+ VG ++ S + E L YI+ Q+ +V+ +GGD Sbjct: 124 PDRVLFHVSNTCAMYCRHCTRKRKVGDVD-SIPSRDNLERGLEYIRNTPQVRDVLLSGGD 182 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+LS ++L +L +R I HV+++R +R P+V P RI EL+ L + P+++ H Sbjct: 183 PLMLSDEKLDWLLTEIRAIDHVEVVRIGTRTPVVLPYRITDELVSMLAKH-HPLWLNTHF 241 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E + + AI RLA+AGI L +QSVLL G+ND ++ L ++ RI+PYYL+ Sbjct: 242 NHPRELTASSRRAIQRLADAGIPLGNQSVLLAGVNDCQRLIRTLNLKLIKNRIRPYYLYQ 301 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 DL+ G +HFR I +G +I+ SL+ SG P Y++D PGG GK+ + + + G Sbjct: 302 CDLSEGLTHFRTPIGKGIEIIESLRGHTSGFSVPTYVVDAPGGGGKIPVMPNYVVSWGPN 361 Query: 334 SYCITDHHNIVHDY 347 + ++ ++ Y Sbjct: 362 KVVLRNYEGVITTY 375 >gi|294499134|ref|YP_003562834.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551] gi|294349071|gb|ADE69400.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551] Length = 469 Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust. Identities = 121/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + +DL + ++ + +K + + +TP A L++ ++P PI Q +P EE Sbjct: 36 TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDENDPKCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+ YI QI +V+ +GGD L+++ L+ +LK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L LK+ PV++ H N E +EE+ A LANAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLANAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+ SG Sbjct: 274 INDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +I+D PGG GK+ + + I + + + ++ YP Sbjct: 334 PTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYP 375 >gi|20092773|ref|NP_618848.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A] gi|19918069|gb|AAM07328.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A] Length = 419 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 126/352 (35%), Positives = 203/352 (57%), Gaps = 9/352 (2%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q R++ +T+ ++L + + +IK+ +S+A++P A+LI+P +P PI Q Sbjct: 21 WQYRNR-ITTVEELEKLIPLSDPEKADIKKALEVFSMAISPYYASLIDPEDPKCPIRMQA 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 +P EL E EDP+ ++ SP K I HRYPDR+L + + C +YCR C R+ V Sbjct: 80 VPLSAELQKSSWELEDPLCEDLDSPSKESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 139 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G+++ S K + YI+E ++ +V+ +GGD L++S +RL +L L I HV+I+ Sbjct: 140 GNREYD-YSEKTIREGIEYIREHPEVRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIV 198 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGII 236 R +R P+ PQRI PEL + L GK V++ H NHP E + EA A+ LA AGI Sbjct: 199 RIGTRAPVTLPQRITPELCEIL---GKYPSVWLNTHFNHPKEITSEAKKAMGMLARAGIP 255 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 L +QSVLL+G+ND P I+ L + ++ +PYYL+ DL+ G HFR ++ G +I+ Sbjct: 256 LGNQSVLLRGVNDCPMIIKKLCHELLRIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEM 315 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 L+ SGL P +++D PGG GK+ + + + + + ++ ++ YP Sbjct: 316 LRGHTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICMYP 367 >gi|254303334|ref|ZP_04970692.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323526|gb|EDK88776.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 425 Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust. Identities = 111/286 (38%), Positives = 178/286 (62%), Gaps = 2/286 (0%) Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 +A+TP +LI+ ++ PI +Q IP +E++ + DP+ ++ SP+ G+ HRYPDR Sbjct: 59 MAITPYYFSLIDMNSDRCPIRKQAIPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDR 118 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +LL + +C +YCR C RR GS + + + A+ YI + Q+ +V+ +GGD L+ Sbjct: 119 VLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-IDKAIEYIAKTPQVRDVLLSGGDALL 177 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 +S K+L+ +++ LR I HV+I+R SR P+V PQRI PEL LK+ P+++ H NHP Sbjct: 178 VSDKKLESIIQKLRAIPHVEIIRIGSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHP 236 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + EA A LA+AG+ L +Q+VLL+GIND ++ L+ V +R++PYY++ DL Sbjct: 237 QEVTPEAKKACEMLADAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDL 296 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + G HFR + +G +I+ L+ SG P +++D PGG GK + Sbjct: 297 SMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPV 342 >gi|302340456|ref|YP_003805662.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae DSM 11293] gi|301637641|gb|ADK83068.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae DSM 11293] Length = 436 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 119/325 (36%), Positives = 194/325 (59%), Gaps = 6/325 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 QL+H ++++S + L K++ E++ + +++TP +LI + NDPI Sbjct: 29 WQLKHSIRSISSFETLTGIQF-DKDKRQELEATVAQFPLSITPYYLSLIEKDDYQNDPIF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q EL + EREDP+ ++ SP++G+ HRYPDR+L + ++C +YCR C R+ Sbjct: 88 LQSFADPRELVVQKWEREDPLHEDKDSPVEGLTHRYPDRVLFHVSNICSMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG ++ + + YI+ + +V+ +GGDPL+L L +L LR I+HV+I Sbjct: 148 VGDVD-SIPNKNQIRKGIDYIRNTPSVRDVLLSGGDPLMLDDDYLDWILTELRRIEHVEI 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR+P+V P R+ +L+ LK+ PV++ H NHP E + + A+++LA+AGI L Sbjct: 207 VRIGSRMPVVLPYRVTDDLVLMLKKH-HPVWLNTHFNHPRELTHASRTALAKLADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P ++ L++ V R++PYYL+ DL+ G +HFR + +G +I+ SL Sbjct: 266 GNQSVLLAGVNDCPRLMKTLVQKLVYSRVRPYYLYQCDLSEGLTHFRTPVGKGIEILESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322 SG P Y++D PGG GK+ I Sbjct: 326 IGHTSGFSVPTYVIDAPGGGGKIPI 350 >gi|237739441|ref|ZP_04569922.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31] gi|229423049|gb|EEO38096.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31] Length = 425 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 111/286 (38%), Positives = 178/286 (62%), Gaps = 2/286 (0%) Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 +A+TP +LI+ ++ PI +Q IP +E++ + DP+ ++ SP+ G+ HRYPDR Sbjct: 59 MAITPYYFSLIDMNSDRCPIRKQAIPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDR 118 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +LL + +C +YCR C RR GS + + + A+ YI + Q+ +V+ +GGD L+ Sbjct: 119 VLLLITDMCSMYCRHCTRRRFAGSSDDAMPMDR-IDRAIEYIAKTPQVRDVLLSGGDALL 177 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 +S K+L+ +++ LR I HV+I+R SR P+V PQRI PEL LK+ P+++ H NHP Sbjct: 178 VSDKKLESIIQKLRAIPHVEIIRIGSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHP 236 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + EA A LA+AG+ L +Q+VLL+GIND ++ L+ V +R++PYY++ DL Sbjct: 237 QEVTPEAKKACEMLADAGVPLGNQTVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDL 296 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + G HFR + +G +I+ L+ SG P +++D PGG GK + Sbjct: 297 SMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGGGKTPV 342 >gi|310822787|ref|YP_003955145.1| l-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1] gi|309395859|gb|ADO73318.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1] Length = 411 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 120/348 (34%), Positives = 189/348 (54%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH + AQ L +E+ ++E + + + ++P +LI+P +P P+ Q Sbjct: 47 WQQRHAVRSLAQLERYVPLTPQERAG-VQETAALFRVGISPYYLSLIDPEHPFCPVRMQS 105 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +EE I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR + Sbjct: 106 IPVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRRITKG 165 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + LS +AYI+ ++ +V+ +GGDP ILS RL+++L L I HV+++R Sbjct: 166 GEAE-LSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRI 224 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ P R+ L L+ PVY+ H NHP E + EA A RL + G+ + +Q Sbjct: 225 GTRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQ 283 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VL++ +N D I+ L + +R++PYYLH D+A G H R I +G +I+ ++ Sbjct: 284 AVLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGH 343 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 +GL P +DLPGG GKV + + + G ++ + YP Sbjct: 344 TTGLAVPHLAVDLPGGGGKVTLQPDYVVERGEHETVFRNYKGERYVYP 391 >gi|83814229|ref|YP_445259.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM 13855] gi|83755623|gb|ABC43736.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM 13855] Length = 401 Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust. Identities = 112/301 (37%), Positives = 177/301 (58%), Gaps = 4/301 (1%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 IK + + +TP A+L+ P +P+ P+ RQ +P +E + DP+ + H P+K Sbjct: 47 IKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQAVPTMDEFGPDIVDELDPLDETGHEPVK 106 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 ++H Y DR+ + C +YCR+C R+ MVG + + + + +AA+ YI +I +V Sbjct: 107 NLIHNYEDRVAFCVTAECAIYCRYCLRKRMVGDAE-YFMRTDEHQAAIDYIAAHDEIRDV 165 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + TGGDPL + L+ +L LR I HV+++RF SR+P+ P RI +L L + P+ Sbjct: 166 LLTGGDPLTFNEANLEWLLSRLRAIDHVELIRFGSRMPVKLPYRITDDLCDLLAQY-HPL 224 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 +I H NHP E + +A AAI RL +AGI + +Q+VLL+G+NDDP+ + L V +R++ Sbjct: 225 WINTHFNHPKECTGDAAAAIGRLKDAGIPVGNQTVLLRGVNDDPDTMKALNEGLVRMRVR 284 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327 PYYL+ + GT H R IE G I+ L+ + SG P Y+LD P +GKV ++ + Sbjct: 285 PYYLYQAQIIGGTGHLRTPIEVGMHIMRQLRGRTSGFAIPDYVLDTP--HGKVPLNRSYV 342 Query: 328 K 328 K Sbjct: 343 K 343 >gi|295704462|ref|YP_003597537.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319] gi|294802121|gb|ADF39187.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319] Length = 469 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 120/342 (35%), Positives = 196/342 (57%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + +DL + ++ + +K + + +TP A L++ ++P PI Q +P EE Sbjct: 36 TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDVNDPKCPIRMQSVPISEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 LHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+ YI QI +V+ +GGD L+++ L+ +LK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L LK+ PV++ H N E +EE+ A L+NAG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLSNAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+ SG Sbjct: 274 INDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +I+D PGG GK+ + + I + + + ++ YP Sbjct: 334 PTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYP 375 >gi|332971462|gb|EGK10416.1| L-lysine 2,3-aminomutase [Desmospora sp. 8437] Length = 435 Score = 226 bits (575), Expect = 5e-57, Method: Compositional matrix adjust. Identities = 119/348 (34%), Positives = 197/348 (56%), Gaps = 3/348 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ DL +K+ ++ + + +TP A ++ +P+ PI Q Sbjct: 24 WQLTH-TIRKLDDLKQVINLKENEVGGVGISHQTIPLNITPYYALQMDTEDPSCPIRMQS 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 83 VPLSTELEQTKYDMEDPLLEDTDSPVPGLTHRYPDRVLFLITNQCSMYCRYCTRRRFSG- 141 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +A + YI+ Q+ +V+ +GGD L+++ + ++ +LK LR I HV+I+R Sbjct: 142 QIGMGVPKKQMDACIDYIRSNPQVRDVLLSGGDGLLVNDRIIEYLLKNLREIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI +L LK+ PV++ H NHP E + EA A LA+AG+ L +Q Sbjct: 202 GTRAPVVFPQRITEDLCNILKKY-HPVWLNTHFNHPKEITPEAKRACEMLADAGVPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND P I+ L V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 AVILAGINDCPHIMKKLNHELVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEYLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P +++D PGG GK+ + + + + + + ++ YP Sbjct: 321 TSGYAVPTFVVDAPGGGGKIPVAPNYVISQSSQKTVLRNFEGVITSYP 368 >gi|294507125|ref|YP_003571183.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8] gi|294343453|emb|CBH24231.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8] Length = 401 Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust. Identities = 111/301 (36%), Positives = 177/301 (58%), Gaps = 4/301 (1%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 IK + + +TP A+L+ P +P+ P+ RQ +P +E + DP+ + H P+K Sbjct: 47 IKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQAVPTMDEFGPDIVDELDPLDETGHEPVK 106 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 ++H Y DR+ + C +YCR+C R+ MVG + + + + +AA+ YI +I +V Sbjct: 107 NLIHNYEDRVAFCVTAECAIYCRYCLRKRMVGDAE-YFMRTDEHQAAIDYIAAHDEIRDV 165 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + TGGDPL + L+ +L LR I HV+++RF SR+P+ P RI +L L + P+ Sbjct: 166 LLTGGDPLTFNEANLEWLLSRLRAIDHVELIRFGSRMPVKLPYRITDDLCDLLAQY-HPL 224 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 +I H NHP E +++A AAI RL +AGI + +Q+VLL+G+NDDP+ + L V +R++ Sbjct: 225 WINTHFNHPKECTDDAAAAIGRLKDAGIPVGNQTVLLRGVNDDPDTMKALNEGLVRMRVR 284 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327 PYYL+ + GT H R IE G + L+ + SG P Y+LD P +GKV ++ + Sbjct: 285 PYYLYQAQIIGGTGHLRTPIEVGMHTMRQLRGRTSGFAIPDYVLDTP--HGKVPLNRSYV 342 Query: 328 K 328 K Sbjct: 343 K 343 >gi|73748139|ref|YP_307378.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1] gi|73659855|emb|CAI82462.1| L-lysine 2,3-aminomutase homologe, probable frameshift [Dehalococcoides sp. CBDB1] Length = 708 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 125/353 (35%), Positives = 200/353 (56%), Gaps = 11/353 (3%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64 + LT+ + L E+ +++ + +++TP +LI+ N NDP+ Q +P Sbjct: 26 RDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVFIQSVPSA 84 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG Sbjct: 85 AELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDIDKN 144 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ++R +RV Sbjct: 145 -LSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQVIRIGTRV 203 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L +Q+VLL Sbjct: 204 PVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPLGNQTVLL 262 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L SG Sbjct: 263 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 322 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350 P Y++D P G GK+ I + + + + ++ I+ Y PPK Sbjct: 323 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 375 >gi|289432216|ref|YP_003462089.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT] gi|288945936|gb|ADC73633.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT] Length = 730 Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust. Identities = 125/353 (35%), Positives = 200/353 (56%), Gaps = 11/353 (3%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64 + LT+ + L E+ +++ + +++TP +LI+ N NDP+ Q +P Sbjct: 48 RDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNYENDPVFIQSVPSA 106 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG Sbjct: 107 AELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDIDKN 166 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ++R +RV Sbjct: 167 -LSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQVIRIGTRV 225 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L +Q+VLL Sbjct: 226 PVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPLGNQTVLL 284 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L SG Sbjct: 285 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 344 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350 P Y++D P G GK+ I + + + + ++ I+ Y PPK Sbjct: 345 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397 >gi|224367500|ref|YP_002601663.1| KamA1 [Desulfobacterium autotrophicum HRM2] gi|223690216|gb|ACN13499.1| KamA1 [Desulfobacterium autotrophicum HRM2] Length = 436 Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 116/301 (38%), Positives = 183/301 (60%), Gaps = 3/301 (0%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDN 81 EQ +K+ + + +++TP +LIN + +DPI RQ + EL ++ +DP+ ++ Sbjct: 51 EQRVLLKKTMDKFPMSITPYYLSLINTDDLEHDPIFRQSVASVRELEFSNDDMKDPLHED 110 Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 SP+ GI HRYPDR+L + + C +YCR C R+ VG ++ ++ A + YI+ Sbjct: 111 KDSPVPGITHRYPDRVLFLVSNRCAMYCRHCTRKRKVGDVD-SIPGKQEILAGIDYIRNN 169 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 +I +V+ +GGDPL+LS L +L L I+HV+++R +R P+V P RI + LK Sbjct: 170 PEIRDVLLSGGDPLLLSTSYLDWILTELEKIEHVEVIRIGTRTPVVLPYRITDAMTNMLK 229 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 P++I H NHP E + A A+++LANAGI L +Q+VLL G+ND P I+ +L+ Sbjct: 230 RH-HPIWINTHFNHPREVTASARDALTKLANAGIPLGNQTVLLAGVNDCPRIMRSLVHKL 288 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 V R++PYYL+ DL+ G +HFR + +G +I+ SL SG C P Y++D PGG GK+ Sbjct: 289 VLNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESLIGHTSGFCVPTYVIDAPGGGGKIP 348 Query: 322 I 322 + Sbjct: 349 V 349 >gi|20807659|ref|NP_622830.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4] gi|20516205|gb|AAM24434.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4] Length = 419 Score = 225 bits (573), Expect = 8e-57, Method: Compositional matrix adjust. Identities = 128/351 (36%), Positives = 199/351 (56%), Gaps = 10/351 (2%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ ++ + L + +E+I+ IK +S Y A++P A+L++P NP PI + Sbjct: 70 WQIRNR-ISDVETLKKIVNLSEEEIENIKRVSTRYRWAISPYYASLMDPDNPFCPIRMRA 128 Query: 61 IPQKEELNI---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 IP +EL +P DP+ + SP I RYPDR+++ + + C ++CR C RR Sbjct: 129 IPSIKELTDKYGVP----DPMAEEYTSPAPLITRRYPDRLIINVTNQCGMFCRHCQRRRN 184 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 +G + +D EAAL YI+ +I +V+ TGGDPL L +++ +L L I HV+I Sbjct: 185 IG-EVDYPAKHEDIEAALEYIRNNPEIRDVLITGGDPLTLEDEKIDWILSELDKIPHVEI 243 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 R + P+ PQRI EL + L + P+YI NHP E +EEA A +LA AG+ L Sbjct: 244 KRIGTAAPVTFPQRITDELCKILTKH-LPLYINTQFNHPKEVTEEAKEACFKLARAGVAL 302 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLLKGIN+DP ++ L + + +KPYY+ H GT+HF T+++G +I+ L Sbjct: 303 GNQAVLLKGINNDPHVMKKLNHELLRIMVKPYYIFHAKSVQGTTHFVTTVQDGLEIMEQL 362 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 + SGL P+YI++ P G+GK I + VG I + V +YP Sbjct: 363 RGYTSGLAIPWYIINAPEGHGKTPIVPQYLLMVGKEYVLIRNWEGKVFEYP 413 >gi|91772337|ref|YP_565029.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242] gi|91711352|gb|ABE51279.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242] Length = 435 Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 127/350 (36%), Positives = 201/350 (57%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 QL+H + + + + L N E+ +++KE + +++TP +LI+ + NDPI Sbjct: 29 WQLKHSIRDIETFERLLGINFEPPEK-EKLKETLEKFPLSITPYYLSLIDSDDFRNDPIF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q P EEL I +E EDP+ ++ SP++GI HRYPDR+L + +VC +YCR C R+ Sbjct: 88 LQSFPSPEELIISADELEDPLSEDTDSPVEGITHRYPDRVLFHISNVCSMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG K E + YI+ QI +V+ +GGDPL+LS L +L + I HV++ Sbjct: 148 VGDIDYIPEKEKILEG-IEYIRNTPQIRDVLLSGGDPLMLSDDFLDWILTEINSIPHVEV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR+P+V P RI EL+ LK+ P+++ H NHP E + + A+ +LA+AGI L Sbjct: 207 IRIGSRMPVVLPYRITDELVDVLKKH-HPIWLNTHFNHPREMTFSSRQALKKLADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND I+ L+ V+ R++PYYL+ DL+ G SHFR I +G +I+ +L Sbjct: 266 GNQTVLLAGVNDCQRIIKKLVHKLVQNRVRPYYLYQCDLSEGLSHFRTPIGKGIEIMENL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D P G GK+ + + I + ++ ++ Y Sbjct: 326 IGHTSGFSVPTYVIDAPHGGGKIPVMPNYIISWSTNRVILRNYEGVITSY 375 >gi|147668784|ref|YP_001213602.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1] gi|146269732|gb|ABQ16724.1| beta-lysine acetyltransferase / L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1] Length = 730 Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 125/353 (35%), Positives = 200/353 (56%), Gaps = 11/353 (3%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQK 64 + LT+ + L E+ +++ + +++TP +LI+ N NDP+ Q +P Sbjct: 48 RDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVFIQSVPSA 106 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ VG Sbjct: 107 AELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRKVGDIDKN 166 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ++R +RV Sbjct: 167 -LSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQVIRIGTRV 225 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L +Q+VLL Sbjct: 226 PVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITATSSRALGMLADAGIPLGNQTVLL 284 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L SG Sbjct: 285 AKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENLIGHTSGF 344 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350 P Y++D P G GK+ I + + + + ++ I+ Y PPK Sbjct: 345 AVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397 >gi|115380257|ref|ZP_01467275.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1] gi|115362736|gb|EAU61953.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1] Length = 378 Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust. Identities = 118/331 (35%), Positives = 184/331 (55%), Gaps = 3/331 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q RH + AQ L +E+ ++E + + + ++P +LI+P +P P+ Q I Sbjct: 48 QQRHAVRSLAQLERYVPLTPQERAG-VQETAALFRVGISPYYLSLIDPEHPFCPVRMQSI 106 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P +EE I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR + Sbjct: 107 PVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRRITKGG 166 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + LS +AYI+ ++ +V+ +GGDP ILS RL+++L L I HV+++R Sbjct: 167 EAE-LSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRIG 225 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +RVP+ P R+ L L+ PVY+ H NHP E + EA A RL + G+ + +Q+ Sbjct: 226 TRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQA 284 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VL++ +N D I+ L + +R++PYYLH D+A G H R I +G +I+ ++ Sbjct: 285 VLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGHT 344 Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332 +GL P +DLPGG GKV + + + G Sbjct: 345 TGLAVPHLAVDLPGGGGKVTLQPDYVVERGE 375 >gi|116751432|ref|YP_848119.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700496|gb|ABK19684.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB] Length = 360 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 117/296 (39%), Positives = 175/296 (59%), Gaps = 4/296 (1%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 DP+ RQ +P EL+ +DP+ + SP+ +VHRYP+R+L + H C ++CRFC Sbjct: 51 GDPLWRQVMPDAMELSD-DAGLQDPLAEEALSPVPNLVHRYPNRVLWLVSHECALHCRFC 109 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 R+ S ++ + L YI+E Q+ +V+ +GGDPL+L RL+ +L LR+I Sbjct: 110 TRKRRWSSP--LPMTGELLRDGLRYIRENPQVNDVLLSGGDPLLLDPSRLETILGELRHI 167 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 HV +LR +RVP P+R+ EL L P+++ IH NHP E +EE+ A + LA+ Sbjct: 168 PHVAVLRIGTRVPCALPERVTGELATMLARH-HPLFLNIHFNHPREITEESRRACALLAD 226 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AGI L SQ+VLL+ +NDD +L L +T + LR++PYYL DL GT+HFR + G + Sbjct: 227 AGIPLGSQTVLLRDVNDDAHVLGELFQTLLGLRVRPYYLMQMDLTRGTAHFRTPLSRGLE 286 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 IVA L+ +ISG+ P ++DLPGG GKV + + I+ +G + YP Sbjct: 287 IVARLRNRISGMAVPQLVVDLPGGLGKVPLVPNRIEHIGEDHVVFRSYQGAPCRYP 342 >gi|78355236|ref|YP_386685.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217641|gb|ABB36990.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 454 Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 113/295 (38%), Positives = 180/295 (61%), Gaps = 3/295 (1%) Query: 29 KEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 K + + +++TP +LI+ + +DP+ Q P ELN+ P + DP+ ++ SP Sbjct: 58 KRTLDKFPMSITPYYFSLIDQEDYESDPVFMQAFPDIRELNVSPHDMADPLHEDEDSPAP 117 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 GI HRYPDR+L + ++C +YCR C R+ VG + +V + + YI+ I +V Sbjct: 118 GITHRYPDRVLFHVSNLCSMYCRHCTRKRKVG-DRDSVPDRGQLKQGIEYIRRTPAIRDV 176 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + +GGDPL+LS +RL +L +R I HV+I+R SR+P+V P RI L+ LK+ P+ Sbjct: 177 LLSGGDPLMLSDERLDWLLGEIRSIPHVEIIRIGSRMPVVLPYRITDGLLAVLKKH-HPL 235 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 ++ H NHP E + + A++R+A+AGI L +QSVLL +ND P + L + V+ R++ Sbjct: 236 WLNTHFNHPRELTRTSRRALARMADAGIPLGNQSVLLADVNDCPRLFRTLNQKLVQNRVR 295 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 PYY++ DL+ G SHFR + +G +I+ SL SG+ P Y++D PGG GK+ + Sbjct: 296 PYYMYQCDLSEGLSHFRTPVGKGIEIIESLVGHTSGMAVPTYVIDAPGGGGKIPM 350 >gi|21227036|ref|NP_632958.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1] gi|20905357|gb|AAM30630.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1] Length = 419 Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust. Identities = 124/352 (35%), Positives = 205/352 (58%), Gaps = 9/352 (2%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q R++ +T+ ++L L+ + +IK+ + +A++P A+LI+P +P P+ Q Sbjct: 21 WQYRNR-ITTVEELEKLILLSDTEKRDIKKALEVFPMAISPYYASLIDPDDPECPVRLQA 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 +PQ EL E EDP+ ++ SP + I HRYPDR+L + + C +YCR C R+ V Sbjct: 80 VPQSAELQKSSWELEDPLCEDQDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 139 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G+++ S K + YI+ ++ +V+ +GGD L++S +RL +L L I HV+I+ Sbjct: 140 GNREHD-YSEKAIREGIEYIRMHHEVRDVLLSGGDALLVSDERLDWLLGELFSIPHVEIV 198 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGII 236 R +R P+ PQRI PEL + L GK V++ H NHP E + EA A++ LA AGI Sbjct: 199 RLGTRAPVTLPQRITPELCEIL---GKYPSVWLNTHFNHPKEITPEAKKAMNMLACAGIP 255 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 L +QSVLL+ +ND P I+ NL ++++ +PYYL+ DL+ G HFR ++ G +I+ Sbjct: 256 LGNQSVLLRRVNDCPVIIKNLCHELLKIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEM 315 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 L+ SGL P +++D PGG GK+ + + + + + ++ ++ YP Sbjct: 316 LRGHTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICVYP 367 >gi|317154407|ref|YP_004122455.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio aespoeensis Aspo-2] gi|316944658|gb|ADU63709.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio aespoeensis Aspo-2] Length = 416 Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 112/267 (41%), Positives = 164/267 (61%), Gaps = 2/267 (0%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 + R P E + E EDP+G+ H + GIVHRYPDR+L C YCR+C R Sbjct: 111 LRRCIEPTIHEFVMDQSEAEDPLGEEGHMVVPGIVHRYPDRVLFLATDYCSTYCRYCTRS 170 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 +VG + G +K ++A+AYI+ I +V+ +GGDPL L RL +L LR I HV Sbjct: 171 RLVG-RNGRKHDTKKWKSAIAYIRNTPAIRDVLLSGGDPLTLPDDRLDWLLTELRAIPHV 229 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235 +I+R ++VP V PQRI PEL L++ P++I++H HP E + E + A + LA+AGI Sbjct: 230 EIIRIGTKVPAVLPQRITPELTAMLRKH-HPLFISLHFAHPDELTAETVRACTMLADAGI 288 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 L SQ+VLLKG+NDD + LM+ ++ R++PYYL+ D G++HFR +E+G +I+ Sbjct: 289 PLGSQTVLLKGVNDDTNTMKRLMQGLLKARVRPYYLYQCDPIPGSAHFRTRVEKGLEIIQ 348 Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKI 322 L+ SG P Y++D PGG GK+ + Sbjct: 349 GLRGHTSGYAVPSYVIDAPGGGGKIPL 375 >gi|291286722|ref|YP_003503538.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio acetiphilus DSM 12809] gi|290883882|gb|ADD67582.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio acetiphilus DSM 12809] Length = 393 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 111/320 (34%), Positives = 186/320 (58%), Gaps = 4/320 (1%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 E + A+TP A+L+ + D + R IP E+ E +DP+G+++ SP+ G+ Sbjct: 73 ETCSGLPFAVTPYYASLLTGTSSCDAVRRTVIPTHMEMIKGRGEADDPLGEDSCSPVDGL 132 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVI 148 VHRYPDR+L + C YCR+C R +G G + + + A+ YI+ Q+ +V+ Sbjct: 133 VHRYPDRVLFLVTEHCSTYCRYCTRSRKMGEIHSGNI--KERWQKAIDYIKATPQVRDVL 190 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 +GGDPL+L ++ +L++L I+HV+++R ++ P+V PQRI LI+ LK +P++ Sbjct: 191 ISGGDPLVLPDASIKWLLESLSAIEHVEMIRIGTKAPVVLPQRITKSLIKILKSV-RPLF 249 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 ++IH HP E + E + A + LA+AGI L SQ+VLLKG+ND + L L +++R++P Sbjct: 250 MSIHFTHPDELTAETVQACNMLADAGIPLGSQTVLLKGVNDSVDTLKGLYHGLLKVRVRP 309 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIK 328 YYL+ D +G+ HFR +E G ++ L+ +G P Y++D PGG GK+ + + Sbjct: 310 YYLYQCDPISGSGHFRTKVETGLNMIKGLRGHTTGYAIPNYVIDAPGGGGKIPLIPDYFQ 369 Query: 329 KVGNGSYCITDHHNIVHDYP 348 G + ++ + YP Sbjct: 370 GKSEGQIMLKNYQGNTYLYP 389 >gi|302392039|ref|YP_003827859.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501] gi|302204116|gb|ADL12794.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501] Length = 401 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 131/323 (40%), Positives = 200/323 (61%), Gaps = 5/323 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL++ ++T+A +L I +Q +EIKE + + +++TP A+LI+ + PI Q Sbjct: 22 WQLKN-SITTADELQQYFDIDDQQAEEIKEAAKIFPMSITPYYASLIDFDDELCPIKLQA 80 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +PQKEEL E EDP+ + SP+ G+ HRYPDR+LL + + C ++CR C R+ VG Sbjct: 81 VPQKEELEEYEYEMEDPLHEEEDSPVPGLTHRYPDRVLLMVTNYCSMFCRHCTRKRKVGD 140 Query: 121 QKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 G D +A + YI+ Q+ +V+ +GGDPL+L +L+K++ L+ I HV+I+R Sbjct: 141 --GNTQDDFDQIQAGIEYIKNNPQVRDVLLSGGDPLLLDLDKLEKIIARLKEIPHVEIVR 198 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 SRVP+V PQRI+ ELI LK+ P++I H NH E + + A+++LA+ G L + Sbjct: 199 LGSRVPVVLPQRIDDELIARLKKYS-PLWINTHFNHKKEITSRSKKALAKLADNGFPLGN 257 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+ IND P ++ +LM V R++PYYL+ DL+ G HFR +I G +I+ SL Sbjct: 258 QTVLLRNINDSPAVMEDLMHKLVANRVRPYYLYQCDLSRGIEHFRTSISTGIEIIESLIG 317 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 SG P Y++D PGG GK+ I Sbjct: 318 HTSGFAVPRYVVDAPGGGGKIPI 340 >gi|195952479|ref|YP_002120769.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp. Y04AAS1] gi|195932091|gb|ACG56791.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp. Y04AAS1] Length = 365 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 124/338 (36%), Positives = 199/338 (58%), Gaps = 7/338 (2%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLI-NPHNPNDPIARQ 59 QL+++ +T+ ++L + E+I ++ Y A+TP +L+ NP + DPI Q Sbjct: 15 WQLQNR-ITTLEELSKYIELTNEEIKFFDAVAEEYPFAVTPYYLSLVKNPKDKKDPIRLQ 73 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E++ ++ P N + +KG+ HRY DR L+ + C VYCR C R+ + Sbjct: 74 IVPSPLEIDENAQQNSHPNALNEETFIKGLTHRYEDRALISVTSYCGVYCRHCMRKRIF- 132 Query: 120 SQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 ++GT + K+ + YI+ I +V+ +GGDPL L ++RL+ +L L I+H++++ Sbjct: 133 -KEGTHAAPKELLDVYFDYIKNHKTIKDVLISGGDPLTLDNERLKYILNNLSSIEHLEVI 191 Query: 179 RFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 R SRVP+ PQR+ + EL+ L K ++I H NHP E +E+A AI L AG+ + Sbjct: 192 RIGSRVPVTLPQRLYDEELLDILSRYDK-LWINTHFNHPNEITEDAKVAIRNLLKAGVPV 250 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLLKG+NDD E + LMR + +++KP YL H D GT HFR +IE+G +I+ + Sbjct: 251 NNQAVLLKGVNDDKETMLELMRKLLSIKVKPQYLFHCDPITGTIHFRTSIEKGLEIMDYM 310 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335 + ++SG P Y +DLPGG GKV + KK+ +G Y Sbjct: 311 RGRLSGFGIPTYAIDLPGGKGKVPLIPSYFKKLEDGLY 348 >gi|126178166|ref|YP_001046131.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus marisnigri JR1] gi|125860960|gb|ABN56149.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1] Length = 437 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 114/302 (37%), Positives = 180/302 (59%), Gaps = 3/302 (0%) Query: 22 KEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGD 80 K++ E++E ++ + + +TP +LI+ + NDPI Q P EL + P++ EDP+ + Sbjct: 51 KDERRELEETASRFPLRITPYYLSLIDAKDLWNDPIFMQCFPSPAELQVEPDDMEDPLAE 110 Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 + P I HRYPDR+L + +VC +YCR C R+ VG ++ S + +L YI+E Sbjct: 111 DADHPAPCITHRYPDRVLFLVSNVCAMYCRHCTRKRKVGDVD-SIPSEAEVIESLDYIRE 169 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 I +V+ +GGDP +L RL +L L I+HV+++R +R P+V P RI EL L Sbjct: 170 NPGIRDVLLSGGDPFMLPDDRLDWILTELDDIEHVEVVRIGTRTPVVLPYRITEELCAML 229 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 P+++ H NHP E + + A++RLA+AGI L +Q+VLL G+ND I+ L+ Sbjct: 230 ARH-HPLWVNTHFNHPAEITASSQKALARLADAGIPLGNQTVLLAGVNDCSRIMKTLVHK 288 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 V R++PYYL+ DL+ G +HFR + +G +I+ +L SG P Y++D PGG GK+ Sbjct: 289 LVRNRVRPYYLYQCDLSEGLAHFRTPVSKGIEIIENLIGHTSGFAVPTYVIDAPGGGGKI 348 Query: 321 KI 322 + Sbjct: 349 PV 350 >gi|168699149|ref|ZP_02731426.1| lysine 2,3-aminomutase YodO family protein [Gemmata obscuriglobus UQM 2246] Length = 481 Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust. Identities = 114/290 (39%), Positives = 174/290 (60%), Gaps = 3/290 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQK-EELNILPEEREDPIGDNNHSPLKGIVHRY 93 Y +A+ P +LI+P +PNDPI Q +P E + E +DP+ + SP+ G+ HRY Sbjct: 83 YKLAIPPYFFSLIDPEDPNDPIRLQSVPSPLEAESASGHELDDPLEEEKDSPVPGLTHRY 142 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 DR LL C +YCR+C R+ ++ G S D E + Y++E +I +VI +GGD Sbjct: 143 SDRALLVTTPNCTMYCRYCTRKRATLTRGGWEGVSADDERMIQYVREHREIKDVIVSGGD 202 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIH 212 PL L +L+ L++L+ +KHV ++R +RVP+ PQR+ +PELI L A K VY+ H Sbjct: 203 PLTLPMGKLRYYLESLKAMKHVDVIRVGTRVPVTLPQRLYDPELIDLLGSAEK-VYVQTH 261 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 NHP E + EA+ A L AG+ + + +VLLKG+NDD + +L R + +++PYYL Sbjct: 262 FNHPREVTPEAVRACKSLLRAGVPINNHTVLLKGVNDDVGTMRSLFRALLRAKVRPYYLF 321 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 H D G HFR ++ +G +I+ L+ +SG+ P Y++D P G GK+ I Sbjct: 322 HCDPVTGAGHFRTSVWKGLEIMEGLRGHMSGIGIPTYVVDGPQGSGKIPI 371 >gi|78045085|ref|YP_361273.1| putative L-lysine 2,3-aminomutase [Carboxydothermus hydrogenoformans Z-2901] gi|77997200|gb|ABB16099.1| putative L-lysine 2,3-aminomutase [Carboxydothermus hydrogenoformans Z-2901] Length = 411 Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust. Identities = 117/295 (39%), Positives = 181/295 (61%), Gaps = 5/295 (1%) Query: 27 EIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE-DPIGDNNHSP 85 E++E+S Y A++P +LI+P +P+ I +Q IP L +L + E DP+ + SP Sbjct: 91 ELEEVSKVYRFAISPYYLSLIDPDDPDCGIKKQSIPSI--LEVLDDTGELDPMNEAGTSP 148 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 + + RYPDR+++ + ++C +YCR C RR +G + EA L YI+E +I Sbjct: 149 VAAVTRRYPDRLIINVTNMCGMYCRHCQRRRNIGEVDRKTPREQIKEALL-YIREHKEIR 207 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +V+ TGGD L+LS L +LK L I HV+I R +RVP+ PQR+ L++ LK+ Sbjct: 208 DVLITGGDALLLSDLELDWILKELSEIPHVEIKRIGTRVPVTLPQRVTDNLVKILKKY-P 266 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 P+YI NHP E + EA A+ +L AG++L +Q+VLLKG+ND+P I+ L +++R Sbjct: 267 PIYINTQFNHPREVTPEAKKAVDKLIEAGVVLGNQAVLLKGVNDNPVIMEKLNHELLKIR 326 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 ++PYY+ GT HF IE+G +I+ SL+ SGL P+YI++ PGG+GK+ Sbjct: 327 VRPYYIFQAKRVRGTMHFVPKIEDGLRIMESLRGYTSGLAVPYYIVNAPGGFGKI 381 >gi|258513920|ref|YP_003190142.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum acetoxidans DSM 771] gi|257777625|gb|ACV61519.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum acetoxidans DSM 771] Length = 432 Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust. Identities = 120/328 (36%), Positives = 193/328 (58%), Gaps = 4/328 (1%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + +E+ +I+++ + +++P A+LI P + NDP+ Q +P +EL++ DP+ Sbjct: 92 LSEERCAQIRKVGLKFRWSVSPYYASLIVPDSLNDPVMLQSVPSIKELDV--SGYADPMA 149 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + SP I RYPDR+++ + + C +YCR C RR +G + +D AAL YI+ Sbjct: 150 EELTSPAPCITRRYPDRLIINVTNKCAMYCRHCQRRRGIGDVDRHQ-THQDLLAALDYIR 208 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + +I +V+ TGGD L+LS K++ +L L IKHV+I R +R + PQRI PEL + Sbjct: 209 KNKEIRDVLITGGDALLLSDKKIDWLLSELDSIKHVEIKRLGTRTIVTLPQRITPELCEV 268 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 LK+ PVYI NHP E + E+ A L +AG++L +Q+VLLKGIN++P ++ L + Sbjct: 269 LKQH-PPVYINTQFNHPQEITPESKLACDMLVSAGVVLGNQAVLLKGINNNPHVMKKLNQ 327 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 +++R++PYY+ H GT HF ++ EG +I+ L+ SGL P YI++ P GYGK Sbjct: 328 ELLKIRVRPYYIFHAKQVIGTRHFITSVNEGIEIMEKLRGYTSGLAVPTYIINAPNGYGK 387 Query: 320 VKIDTHNIKKVGNGSYCITDHHNIVHDY 347 + I + + N S + + N DY Sbjct: 388 IPILPKYLLGIDNSSVRLRNWENRQIDY 415 >gi|228994304|ref|ZP_04154195.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442] gi|228765454|gb|EEM14117.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442] Length = 367 Score = 222 bits (565), Expect = 7e-56, Method: Compositional matrix adjust. Identities = 119/327 (36%), Positives = 185/327 (56%), Gaps = 5/327 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 +Q R++ + ++L + E+ IK Y A+TP A+L++ +P+ PI +Q Sbjct: 12 LQFRNR-IQKIEELKQYINVTPEEEQAIKRCEGIYRWAVTPYYASLMDKDDPSCPIRKQA 70 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP E I DP+GD + IVH+YPDRI++ + CPVYCR C R+ Sbjct: 71 IPSSGEFMINEYSDVDPVGDTKYRVTNRIVHKYPDRIIMLITDQCPVYCRHCTRKYHTTD 130 Query: 121 QKGTVLSSKDTEA---ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 GT + E YI+ +I +V+ TGGDPL S +RL+ +LK LR I HV+I Sbjct: 131 LDGTYFERSEAEGYEIDFEYIENHPEIRDVLLTGGDPLTYSDRRLESILKRLRSIPHVEI 190 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +RF SR P++ PQRI E + L E P+++ H NHP E ++E+ A++ L G+ + Sbjct: 191 IRFGSRYPVLLPQRITKEFCEML-EKYHPIWLNTHFNHPKEVTKESAHAVNLLLKHGVPV 249 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLLKGINDD + + L++ +++R++PYYL+H D G SHF ++E+G +I+ L Sbjct: 250 QNQSVLLKGINDDLDTMKQLVQALLKIRVRPYYLYHCDNVTGVSHFMTSLEKGVEIMRGL 309 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDT 324 +G P YI+ G + ++T Sbjct: 310 VGHTTGFATPNYIITTINGKIPIPLET 336 >gi|300723094|ref|YP_003712392.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061] gi|297629609|emb|CBJ90212.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061] Length = 392 Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust. Identities = 121/319 (37%), Positives = 181/319 (56%), Gaps = 5/319 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLR+ TS +DL + + I+ + Y TP A+L++ ++ N PI Q Sbjct: 18 FQLRNLIKTS-EDLEKWIALTDNEKKAIEAVKGKYLWQSTPYYASLMDKYDANCPIRLQT 76 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP E+ I DP+GD ++ ++H+YP+RI+L + CPVYCR C R+ Sbjct: 77 IPHLREMKIETNSDNDPVGDTSNLKTARVIHKYPNRIVLLVSDTCPVYCRHCTRKFHTTD 136 Query: 121 QKGTVLSSK---DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 +GT S E AYI+ +I +V+ TGGDPLI K L+ ++K LR IKH+ I Sbjct: 137 VEGTYFGSDLAASYEEDFAYIESHPEIDDVLLTGGDPLIHYDKFLEVIIKRLRSIKHINI 196 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR P+ PQRI + Q L E P+++ H NHP E +EEA A RL GI + Sbjct: 197 IRIGSRYPVFAPQRITEKFCQML-EKYHPIWVNTHFNHPKEVTEEAATACDRLLRHGIPV 255 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLLKGINDD E + +L++ + +R++PYYL+H D +G SHF T+E+G++I+ ++ Sbjct: 256 QNQSVLLKGINDDVETMRSLLKALLRIRVRPYYLYHCDNVSGVSHFMTTLEKGKEIMDAM 315 Query: 298 KEKISGLCQPFYILDLPGG 316 +G P Y++ G Sbjct: 316 VGFETGFSVPQYVVTTTLG 334 >gi|149179692|ref|ZP_01858197.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1] gi|148851884|gb|EDL66029.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1] Length = 468 Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 116/342 (33%), Positives = 194/342 (56%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + ++ + + +TP A L+N + PI Q +P +E Sbjct: 36 TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYAWLMNEEDDRCPIRMQSVPIGKE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 IHKTKYDMEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+ YI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDEAINYIRETPQVRDVLLSGGDGLLINDKILEYVLKNLRDIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L LK+ PV++ H N E +EE+ A L +AG+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKKACEMLVDAGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D PGG GK+ + + + + + ++ YP Sbjct: 334 PTFVVDAPGGGGKIALQPNYMISQSADKVVLRNFEGVITTYP 375 >gi|225849905|ref|YP_002730139.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1] gi|225646470|gb|ACO04656.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1] Length = 378 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 126/344 (36%), Positives = 196/344 (56%), Gaps = 7/344 (2%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + S Q+L I K++ + +++S + TP +L+ + DP+ RQ Sbjct: 28 WQLKNR-IKSIQELEKVFSIDKKKKEIFQKVSPVFHFGTTPYYISLVKKPDYTDPVFRQI 86 Query: 61 IPQKEELN--ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR-REM 117 P EE++ I DP + SP++GI HRYPDR+L ++ C VYCR C R R Sbjct: 87 FPSFEEIDPDIQNNGSNDPFNEE-RSPVEGITHRYPDRVLFRVTTFCSVYCRHCMRKRNF 145 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 + ++ S KD + + YI++ I EV+ +GGDPL L +K+L +L L+ IKHV I Sbjct: 146 IYGERAK--SKKDIDIMIEYIRKNRSIREVLISGGDPLTLPNKKLDYILGRLQGIKHVDI 203 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR P+V+P R E + L E ++I H NHP E ++E A+ + + G + Sbjct: 204 IRIGSREPVVNPFRFYDENLLELFERYDKLWIVTHFNHPNEITQETKKAVKNILSTGTPV 263 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 L+Q+VLLKGINDD I+ LMR+ + ++IKPYYL D G HFR I++G +I+ L Sbjct: 264 LNQTVLLKGINDDKYIIEELMRSLLRVKIKPYYLFFCDPTKGVLHFRTDIKKGIEIMEYL 323 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 + ++SGL P Y +DLP G GKV + I ++ + S ++ Sbjct: 324 RGRLSGLGIPTYAVDLPEGKGKVPLLPEYIVEINDKSTVFRNYE 367 >gi|51246056|ref|YP_065940.1| hypothetical protein DP2204 [Desulfotalea psychrophila LSv54] gi|50877093|emb|CAG36933.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 353 Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust. Identities = 116/280 (41%), Positives = 172/280 (61%), Gaps = 5/280 (1%) Query: 53 NDPIARQFIPQ-KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111 DPI +Q IP +EE + + EDP+G+ SP+ +VH+YPDR LL + + C VYCRF Sbjct: 56 GDPIWKQCIPDPREEEDFIC--MEDPLGEEALSPVPNLVHKYPDRALLLVTNQCAVYCRF 113 Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 C R+ MVG+++ + + ++ +A Y++ I EV+ +GGDPL+L+ ++ +L L+ Sbjct: 114 CTRKRMVGTERMHI-TEENLQACYDYLRRTPAIREVLISGGDPLLLADDKIDHILSELQS 172 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231 I + ++R SRVP P RI PEL+ L++ P+YI H NHP E + EA A + LA Sbjct: 173 IPSIDVIRIGSRVPCTLPMRITPELVAILRKY-HPLYINTHFNHPRELTPEAKKACALLA 231 Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291 + GI L Q+VLLKG+ND+ + L L +++R+KPYYL DL GT+HFR T + G Sbjct: 232 DGGIPLGCQTVLLKGVNDNAQTLKELFLGLLKMRVKPYYLFQADLTRGTNHFRTTTKTGI 291 Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331 I+ L ISG+ P LD PGG GK+ + + IK+ G Sbjct: 292 DIMRQLYGHISGMAIPRLALDAPGGKGKIPLSPNYIKESG 331 >gi|307719756|ref|YP_003875288.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192] gi|306533481|gb|ADN03015.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192] Length = 324 Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust. Identities = 118/310 (38%), Positives = 172/310 (55%), Gaps = 5/310 (1%) Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98 +TP L + H +ARQ P E LP E DP+ D HSPL +VHRYPDR L Sbjct: 7 VTPYYRRLADAHPA---LARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYPDRAL 63 Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C YCRFCFRR S + L+ +A LAY++E ++ EV+ +GGDPL+L Sbjct: 64 ILVTDRCAAYCRFCFRRHFTASGASS-LTPGQEQAILAYLREHPEVEEVLLSGGDPLMLP 122 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 RL +L LR ++ ++R +R+P+V P RI + + A +P+++ H NHP E Sbjct: 123 DTRLAALLSGLRALRPGLVIRLGTRIPVVLPARIT-ARLARILAAARPLWVVTHFNHPAE 181 Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278 + EA AA+ L G+ +++Q+VLL+G+ND E LA L R + +KPYYL DLAA Sbjct: 182 LTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQGDLAA 241 Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 GTSHFR + + L +SGL P +DLP G GKV++ ++ + Y + Sbjct: 242 GTSHFRTPLSRTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETWYYLQ 301 Query: 339 DHHNIVHDYP 348 ++ YP Sbjct: 302 GPDGGLYRYP 311 >gi|315185344|gb|EFU19118.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta thermophila DSM 6578] Length = 324 Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 118/310 (38%), Positives = 173/310 (55%), Gaps = 5/310 (1%) Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98 +TP L + H +ARQ P E LP E DP+ D HSPL +VHRYPDR L Sbjct: 7 VTPYYRRLADTHPA---LARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYPDRAL 63 Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C YCRFCFRR S + + L+ +A LAY++E ++ EV+ +GGDPL+L Sbjct: 64 ILVTDRCAAYCRFCFRRHFTASGESS-LTPGQEQAILAYLREHPEVEEVLLSGGDPLMLP 122 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 RL +L LR ++ ++R +R+P+V P RI + + A +P+++ H NHP E Sbjct: 123 DTRLAALLSGLRALRPGLVIRLGTRIPVVLPTRIT-ARLARILAAARPLWVVTHFNHPAE 181 Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278 + EA AA+ L G+ +++Q+VLL+G+ND E LA L R + +KPYYL DLAA Sbjct: 182 LTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQGDLAA 241 Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 GTSHFR + + L +SGL P +DLP G GKV++ ++ + Y + Sbjct: 242 GTSHFRTPLSHTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETWYYLQ 301 Query: 339 DHHNIVHDYP 348 ++ YP Sbjct: 302 GPDGGLYRYP 311 >gi|94270918|ref|ZP_01291853.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] gi|93450620|gb|EAT01735.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] Length = 365 Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust. Identities = 125/312 (40%), Positives = 173/312 (55%), Gaps = 7/312 (2%) Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85 + ++ + Y + + P +LI P DP+ RQ IP EL ED + + SP Sbjct: 38 EPLRAVCRRYPLRINPYYLSLIK--QPGDPLWRQAIPDPRELTD-SHCPEDSLHEEALSP 94 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 + +VH+YPDR LL C +YCRFC R+ VG + + +AAL Y+ I Sbjct: 95 VPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGGRHR-LQAALDYLAATPAIH 153 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +V+ +GGDPL+L+ L +L LR I H++I+R SRVP PQR+ L LK Sbjct: 154 DVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMGSRVPCTLPQRVTTRLAGILKRF-H 212 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 P+Y+ H NHP E + EA A RLA AGI L +Q+VLLKG+NDD + LMR + +R Sbjct: 213 PLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQTVLLKGVNDDAATIKGLMRGLLRIR 272 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI--D 323 +KPYYL DL+ GT HFR +E+G I+ L SGL P LD PGG GK+ + D Sbjct: 273 VKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLATPTLALDAPGGMGKIPLTPD 332 Query: 324 THNIKKVGNGSY 335 H + K G ++ Sbjct: 333 YHQVLKAGKLTF 344 >gi|288556721|ref|YP_003428656.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4] gi|288547881|gb|ADC51764.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4] Length = 478 Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 113/342 (33%), Positives = 193/342 (56%), Gaps = 2/342 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ + DL + E+ + ++ + + +TP A+L+NP +P PI Q +P EE Sbjct: 36 TIRTLDDLKQVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQSVPIGEE 95 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Q G + Sbjct: 96 IYKTKYDMEDPLEEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG-QIGMGV 154 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K + A+ YI+ ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R +R P+ Sbjct: 155 PKKQLDGAIDYIKNTPEVRDVLISGGDGLLINDTILEYILKNLRAIPHVEIIRIGTRAPV 214 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L LK+ PV++ H N E +EE+ A L N+G+ + +Q+V+L G Sbjct: 215 VFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKNACEMLVNSGVPVGNQAVILAG 273 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND I+ L + V++R++PYY++ DL+ G HFR + +G +I+ L+ SG Sbjct: 274 INDSVPIMKKLCQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYSV 333 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 P +++D P G GK+ + + + + + ++ YP Sbjct: 334 PTFVVDAPHGGGKITLQPNYMISQSPDKVVLRNFEGVITTYP 375 >gi|237755590|ref|ZP_04584206.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5] gi|237692253|gb|EEP61245.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5] Length = 374 Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust. Identities = 119/317 (37%), Positives = 184/317 (58%), Gaps = 5/317 (1%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TS +L IK E+ + +IS + TP +LINP++ NDPI +Q +P +E+ Sbjct: 34 ITSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQILPDIKEI 91 Query: 68 NILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 + +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M + Sbjct: 92 DEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMFLEDE-RA 150 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + ++ +A YI+ I EV+ +GGDPL L +K+++ +LK L I H+ ++R SR Sbjct: 151 RTKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVIRIGSREL 210 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V+P R E + L E V++ H NHP E + E A+ + + G +L+Q+VLLK Sbjct: 211 VVNPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVLNQTVLLK 270 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GIND E + NLMR ++++IKPYYL D G HFR +E G +I+ L+ ++SGL Sbjct: 271 GINDSKETIENLMRDLLKVKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLRGRLSGLG 330 Query: 306 QPFYILDLPGGYGKVKI 322 P + +DL GG GKV + Sbjct: 331 IPTFAVDLLGGLGKVPV 347 >gi|256378515|ref|YP_003102175.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM 43827] gi|255922818|gb|ACU38329.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM 43827] Length = 381 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 113/314 (35%), Positives = 180/314 (57%), Gaps = 5/314 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 +RH+ +T+ L + ++ I + Y ++TP A+L++P +P PI +Q Sbjct: 25 WHMRHR-VTTLDKLREWVRVSPQEEAAISGTAGKYRWSVTPYYASLMDPDDPLCPIRQQA 83 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P + EL P+ DP+GD + +VH+YPDR++L + CPVYCR C R+ Sbjct: 84 VPAQGELLEFPDAEVDPVGDMFYRKTNRVVHKYPDRVVLLVTETCPVYCRHCTRKFHTTD 143 Query: 121 QKGTVLSSKDT---EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 +GT + E L YI+E +I +V+ TGGDPL ++L++++ LR I V+I Sbjct: 144 VEGTYFRDNEGGGYEEDLRYIREHPEIRDVLLTGGDPLSYRDEKLEEIISGLRAIPSVEI 203 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR P++ PQR+ E + L PV++ H NHP E + EA AA+ RL G+ + Sbjct: 204 IRIGSRFPVLLPQRVTDEFCEMLARH-HPVWLNTHFNHPREITPEAAAAVDRLLRHGVPV 262 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLLKGINDD + LM + +R++PYYL+H D G SHF ++E+G +I+ L Sbjct: 263 GNQTVLLKGINDDVPTMRKLMTELLRIRVRPYYLYHCDNVTGVSHFMTSVEKGLEIMEGL 322 Query: 298 KEKISGLCQPFYIL 311 + ++G P Y+L Sbjct: 323 QGHMTGFGVPQYVL 336 >gi|320161902|ref|YP_004175127.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1] gi|319995756|dbj|BAJ64527.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1] Length = 446 Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust. Identities = 129/347 (37%), Positives = 199/347 (57%), Gaps = 11/347 (3%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H+ L S +D + L E + + + +TP +LINP +P+DPI +Q Sbjct: 28 WQLSHR-LNSVED-FEQVLRLTESERKALTTQGLFRVDITPYFVSLINPDDPDDPIRKQV 85 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+ EE+ ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG Sbjct: 86 IPRAEEIVPFTGMMEDSLAEDRHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 145 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T S + E + Y++ Q+ +V+ +GGDPL L+ K L+++L LR I+H++I+R Sbjct: 146 PSAT-FSRAEFEMQIEYLKRTPQVRDVLLSGGDPLTLAPKLLEELLSRLREIEHIEIIRI 204 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SRVP+ PQRI E + + PV++ IH NHP E ++E A RL AG+ L +Q Sbjct: 205 GSRVPVFLPQRITQEFCDMVSKY-HPVWMNIHVNHPNEITQELADACDRLTRAGVPLGNQ 263 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL G+ND + L++ V +R++PYYL+ DL G HFR + +G +I+ L+ Sbjct: 264 SVLLAGVNDCVHVQRKLVQDLVRIRVRPYYLYQCDLVEGAGHFRTPVAKGIEIIEGLRGH 323 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + N ++DH I+ +Y Sbjct: 324 TSGYAVPTYVVDAPGGGGKIPV-------MPNYLISMSDHKIILRNY 363 >gi|255994192|ref|ZP_05427327.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989] gi|255993860|gb|EEU03949.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989] Length = 426 Score = 219 bits (557), Expect = 6e-55, Method: Compositional matrix adjust. Identities = 116/305 (38%), Positives = 190/305 (62%), Gaps = 3/305 (0%) Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77 NL ++E+ D I +I + + + +TP A+L++ ++P P+ Q +P E + + DP Sbjct: 50 NLTEQEKAD-ITKILDGFRVGITPYYASLMDENDPMCPVRMQAVPTILEAHRSEADLLDP 108 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 + ++ SP G+ HRYPDR+L + C +YCR C RR + G G S +D +A +AY Sbjct: 109 LHEDEDSPAPGLTHRYPDRVLFLVTDQCSMYCRHCTRRRLAGETDG-ARSIEDIDACIAY 167 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197 I++ Q+ +V+ +GGD L++ L+ V+K LR I HV+++R SR P+V PQRI PEL+ Sbjct: 168 IKKTPQVRDVLLSGGDALLIDDDVLEYVIKNLRDIPHVEVVRIGSRTPVVCPQRITPELV 227 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 + L++ PV++ H NH E ++ + AA++ LA+AGI L +QSVLL+G+ND P + L Sbjct: 228 KMLRKY-HPVWLNTHFNHKREVTDTSRAALALLADAGIPLGNQSVLLRGLNDCPHKMREL 286 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 + V+ R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D PGG Sbjct: 287 VHEMVKNRVRPYYIYQCDLSLGIEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDAPGGG 346 Query: 318 GKVKI 322 GK + Sbjct: 347 GKTPV 351 >gi|94263390|ref|ZP_01287204.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] gi|93456226|gb|EAT06360.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] Length = 365 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 124/312 (39%), Positives = 172/312 (55%), Gaps = 7/312 (2%) Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85 + ++ + Y + + P +LI P DP+ RQ IP EL ED + + SP Sbjct: 38 EPLRAVCRRYPLRINPYYLSLIK--QPGDPLWRQAIPDPRELTD-SHCPEDSLHEEALSP 94 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 + +VH+YPDR LL C +YCRFC R+ VG + + +AAL Y+ I Sbjct: 95 VPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGGRHR-LQAALDYLAATPAIH 153 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +V+ +GGDPL+L+ L +L LR I H++I+R SRVP PQR+ L LK Sbjct: 154 DVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMGSRVPCTLPQRVTTRLAGILKRF-H 212 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 P+Y+ H NHP E + EA A RLA GI L +Q+VLLKG+NDD + LMR + +R Sbjct: 213 PLYLNTHFNHPRELTAEAATACGRLAAGGIPLGNQTVLLKGVNDDAATIKELMRGLLRIR 272 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI--D 323 +KPYYL DL+ GT HFR +E+G I+ L SGL P LD PGG GK+ + D Sbjct: 273 VKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLATPTLALDAPGGMGKIPLTPD 332 Query: 324 THNIKKVGNGSY 335 H + K G ++ Sbjct: 333 YHQVLKAGKLTF 344 >gi|225181359|ref|ZP_03734803.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter alkaliphilus AHT 1] gi|225167940|gb|EEG76747.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter alkaliphilus AHT 1] Length = 416 Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust. Identities = 115/320 (35%), Positives = 180/320 (56%), Gaps = 3/320 (0%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 ++++ A TP +L+NP +PN P+ RQ IP EEL + P ++DP+G+ SP Sbjct: 96 VRKVGEKNRWATTPYYLSLMNPDDPNCPVRRQAIPATEEL-LNPVGKDDPMGEQYTSPAP 154 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 I RYPDR+++ + + C +YCR C RR +G + + + +D +AAL Y++ +I +V Sbjct: 155 AITRRYPDRLIINVTNQCGMYCRHCQRRRNIG-EVDRMTAREDLQAALDYVRNHPEIRDV 213 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + TGGD L+L+ + + +L L I HV+I R SR + P R+ EL L E PV Sbjct: 214 LLTGGDALMLNEEIIDWLLTELDNIPHVEIKRLGSRTLVTMPMRVTDELCAVL-EKHSPV 272 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 YI H N+P E + A +L AG+ L +Q+VLL G+NDDP ++ L +++ I+ Sbjct: 273 YINTHFNNPAEVTPAVAEATRKLTRAGVSLGNQAVLLAGVNDDPHVMKKLNHMLLQVMIR 332 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327 PYY+ H GT+HFR +E G +I+ L+ + SG+ P +I++ P GYGK + + Sbjct: 333 PYYIFHAKAVTGTAHFRTRVEVGIEIMEHLRGQTSGMAIPTFIVNAPEGYGKTPMLPEYL 392 Query: 328 KKVGNGSYCITDHHNIVHDY 347 G I N V +Y Sbjct: 393 ISSGRDKIFIRTWENRVFEY 412 >gi|189913041|ref|YP_001964930.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|189913370|ref|YP_001964599.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167777717|gb|ABZ96017.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781438|gb|ABZ99735.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 354 Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 122/341 (35%), Positives = 189/341 (55%), Gaps = 4/341 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ +T DL + E+ D + + + A+TP I+ +P+ PI +Q Sbjct: 8 WQLQNR-ITQLADLETKITLTTEERDSFAKAYDQFQFAVTPYYLGRIDNKDPHCPIRKQI 66 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P+ EL E +DP+ + H P+KG+ HRYPDR + + HVC VYCRFC R+ V + Sbjct: 67 LPRAGELVRKQNETDDPLAEEIHMPVKGVTHRYPDRAIWYISHVCAVYCRFCTRKRKVST 126 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S + E AL Y + ++++ EVI +GGDPL LS L +L L+ I H+ +R Sbjct: 127 PEETPNRS-EWEKALDYFRGETKLKEVILSGGDPLTLSDSSLDYLLGELKKIPHLNQIRI 185 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239 H+R P+ P R+ L + P+Y+ H NHP E S+E + R+ G + + + Sbjct: 186 HTRHPVTMPMRLTESLNSVFSKYF-PLYMVTHFNHPNEISDETKFYVMRMIKEGHVSIFN 244 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL GINDD IL++L + + IKPYYLH D G+S F + +E+G +I L+ Sbjct: 245 QSVLLSGINDDANILSDLNYKLISIGIKPYYLHQCDEVFGSSDFVVPLEKGIEIYRKLRG 304 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340 SG+ P Y+ DL GG GKV + ++K + Y ++ Sbjct: 305 FHSGITIPSYVKDLTGGGGKVLLSPDYLQKKTDKGYLFQNY 345 >gi|108761049|ref|YP_632864.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622] gi|108464929|gb|ABF90114.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622] Length = 410 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 113/322 (35%), Positives = 178/322 (55%), Gaps = 4/322 (1%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 ++E S + I ++P +LI+P +P P+ Q IP + E I P E DP+G++ P + Sbjct: 65 VQETSALFRIGISPYYLSLIDPEHPFCPVRMQSIPVRAEARIRPGELADPLGEDKTRPEE 124 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWE 146 IVH+YPDR+L L C VYCR C RR + +Q G LS + + Y++ ++ + Sbjct: 125 CIVHKYPDRVLFLALDTCSVYCRHCTRRRI--TQGGVAELSKEQLRRGVDYVRSHPEVRD 182 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 V+ +GGDP +LS RL+++L L I HV+++R +RVP+ P R+ L + L+ P Sbjct: 183 VLISGGDPFMLSDSRLEELLAPLSEIPHVEMIRIGTRVPVCLPMRVTDALAKTLRRYA-P 241 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 V++ H NHP E + EA A RL + G+ + +Q+VL++ +N D I+ L + R+ Sbjct: 242 VFVVTHFNHPKEVTPEAREACERLVDHGVPVENQAVLMRQLNSDARIIKELSHLLLRSRV 301 Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 +PYYLH D+A G H R I +G +I+ L+ +GL P +DLPGG GKV + Sbjct: 302 RPYYLHQMDVAEGCEHLRTPIAKGLEIIQQLRGYTTGLAVPHLAVDLPGGGGKVTLQPDY 361 Query: 327 IKKVGNGSYCITDHHNIVHDYP 348 + G ++ YP Sbjct: 362 AVEYGAQETVFRNYKGERFTYP 383 >gi|258516088|ref|YP_003192310.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum acetoxidans DSM 771] gi|257779793|gb|ACV63687.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum acetoxidans DSM 771] Length = 408 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 120/303 (39%), Positives = 179/303 (59%), Gaps = 11/303 (3%) Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ----KEELNILPEEREDPIG 79 Q+++IK++ Y A++P +L N N PI +QFIP ++EL + DP+ Sbjct: 84 QLEDIKKVERVYRWAVSPYYLSLSAVDNVNCPIRKQFIPSILELQDELGL-----SDPVD 138 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + N SP K +V RYPDR+++K+ + C +CR C R+ +G Q SS + E A+ YI+ Sbjct: 139 EKNTSPTKAVVRRYPDRLIIKVTNQCASFCRHCQRKRTIGKQDLHT-SSGNIEKAVDYIK 197 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + +I +V+ TGGD L+LS K+L +L L I HV+I R +RVP+ P RI +L Sbjct: 198 KNPEIRDVLITGGDALLLSDKKLDWLLTELDNINHVEIKRIGTRVPVTLPMRITEKLCGI 257 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 L P+YI NHP E + EA A ++L AG++L +QSVLLK IND+P I+ L + Sbjct: 258 LGNH-PPLYINTQFNHPLEVTPEAATACNKLIQAGVVLSNQSVLLKEINDNPHIIKKLNQ 316 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 +++R++PYYL H GT HF + G +I+ L+ SGL P YI+++ GG GK Sbjct: 317 ELLKIRVRPYYLFHAMPVKGTRHFSTKLSVGLEIMEKLRGYTSGLAIPSYIVNVNGGLGK 376 Query: 320 VKI 322 V I Sbjct: 377 VPI 379 >gi|94266932|ref|ZP_01290585.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] gi|93452384|gb|EAT03003.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] Length = 365 Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust. Identities = 130/336 (38%), Positives = 182/336 (54%), Gaps = 10/336 (2%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 +L +LTS +L + E ++ + + Y + + P +LI P DP+ RQ I Sbjct: 17 RLLAASLTSPDELAACFDLDPE---PLRAVCHRYPLRINPYYLSLIE--QPGDPLWRQAI 71 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EL ED + + SP+ +VH+YPDR LL C +YCRFC R+ VG Sbjct: 72 PDPRELTD-SHCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGG 130 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + +AAL Y+ I +V+ +GGDPL+L+ L +L LR I ++I+R Sbjct: 131 RIVGGRHR-LQAALDYLAATPAIHDVLLSGGDPLLLTDDELLWLLAELRKIPQLEIIRMG 189 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SRVP PQR+ L LK P+Y+ H NHP E + EA A RLA AGI L +Q+ Sbjct: 190 SRVPCTLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQT 248 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+NDD + LMR + +R+KPYYL DL+ GT HFR +E+G I+ L Sbjct: 249 VLLKGVNDDAATIKELMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHT 308 Query: 302 SGLCQPFYILDLPGGYGKVKI--DTHNIKKVGNGSY 335 SGL P LD PGG GK+ + D H + K G ++ Sbjct: 309 SGLATPTLALDAPGGMGKIPLTPDYHQVLKAGKLTF 344 >gi|188996732|ref|YP_001930983.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931799|gb|ACD66429.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 374 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 120/324 (37%), Positives = 186/324 (57%), Gaps = 6/324 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++T TS +L IK E+ + +IS + TP +LINP++ NDPI +Q Sbjct: 28 WQIANRT-TSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQI 84 Query: 61 IPQKEELNILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 +P +E++ +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M Sbjct: 85 LPDIKEIDEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMF 144 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + ++ +A YI+ I EV+ +GGDPL L +K+++ +LK L I H+ ++ Sbjct: 145 LEDE-RARTKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVI 203 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R SR + +P R E + L E V++ H NHP E + E A+ + + G +L Sbjct: 204 RIGSRELVANPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVL 263 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKGIND E + NLMR ++ +IKPYYL D G HFR +E G +I+ L+ Sbjct: 264 NQTVLLKGINDSKETIENLMRDLLKAKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLR 323 Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322 ++SGL P + +DL GG GKV + Sbjct: 324 GRLSGLGIPTFAVDLLGGLGKVPV 347 >gi|307322539|ref|ZP_07601885.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti AK83] gi|306891821|gb|EFN22661.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti AK83] Length = 377 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 119/340 (35%), Positives = 188/340 (55%), Gaps = 18/340 (5%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++T+ ++L + E+ + ++S Y +TP +LIN + NDP+ Q +P E Sbjct: 22 SVTTIEELKLYVNVSPEEEEAFHQVSERYGFRVTPYYLSLINKEDRNDPVRLQAVPDIRE 81 Query: 67 LNIL------------PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 L L + E+P+ + + IVHRYPDR+L L + C YCR C R Sbjct: 82 LQDLFHVEQLPSFHRSAVDSENPLWKEGRTDVGCIVHRYPDRVLFHLTNFCATYCRHCSR 141 Query: 115 REMVGSQKGTVLSSK-DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173 + G +G++ + + + +AYI E+ +I +V+ +GGDPL L +L+ VL LR + Sbjct: 142 KVHAG--QGSIATDRTQIDEGIAYIAERPEIRDVLLSGGDPLTLPDSKLEYVLSRLRQLP 199 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 HVQI+R +R P+ PQRI E + +K+ P++I H NHP E + EA AI RL A Sbjct: 200 HVQIIRIGTRTPVTMPQRITSEFCRMVKKY-HPIWINTHFNHPNEITPEAKTAIERLLEA 258 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 G+ + +QSVLLKGIND E++ L+ + R++PYYL+H DL G HFR +I+ G I Sbjct: 259 GVPVGNQSVLLKGINDTVEVMKELVHQLLIARVRPYYLYHADLVRGAEHFRTSIDVGMHI 318 Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 + +L+ +G P Y++ P GK ++ + + G G Sbjct: 319 IENLRGHTTGFAVPQYVICTP--LGKTPLNPNYVIATGPG 356 >gi|169831230|ref|YP_001717212.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis audaxviator MP104C] gi|169638074|gb|ACA59580.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis audaxviator MP104C] Length = 419 Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust. Identities = 128/352 (36%), Positives = 186/352 (52%), Gaps = 12/352 (3%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R K +T+ + L + ++ I +I ++S Y A++P A ++ PI Q Sbjct: 73 WQMR-KRITTVEVLARFMELNRDDIHDIDKVSRQYRWAVSPYYAAVMAVGGVKGPIWAQA 131 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E+ DP+ + SP+ GI RYPDR+++ + + C +YCR C RR +G Sbjct: 132 VPSTAEITD-ARGTTDPMAERLTSPVPGITRRYPDRLIINVTNQCAMYCRHCQRRRNIGE 190 Query: 121 ----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 Q VL EAAL YI+E +I +V+ TGGD L+LS L +L L I HV+ Sbjct: 191 VDRHQPRRVL-----EAALQYIRENPEIRDVLITGGDALLLSDTVLDWLLGELHSIPHVE 245 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 I R +R + PQRI L L E P+YI NHP E + EA+ A RL AG++ Sbjct: 246 IKRLGTRALVTLPQRITAGLCAVL-ERYPPIYINSQFNHPLEVTPEAVQACDRLVRAGVV 304 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 L +Q+VLLKGIN+DP ++ L + R++PYY+ H GTSHF +EEG I+ Sbjct: 305 LGNQAVLLKGINNDPHVMKKLNHELLRARVRPYYIFHAKPVRGTSHFITPVEEGLAIMEQ 364 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 L+ SGL P YI++ PGGYGK + + + + N V YP Sbjct: 365 LRGYTSGLAVPTYIINAPGGYGKTPVTPSYVVDHNDQRLVLRTWENRVLPYP 416 >gi|302340146|ref|YP_003805352.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae DSM 11293] gi|301637331|gb|ADK82758.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae DSM 11293] Length = 374 Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust. Identities = 122/310 (39%), Positives = 175/310 (56%), Gaps = 15/310 (4%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P P+ RQ IP+KEE + L E DP+ + +SPL ++HRY DR L C +YCR Sbjct: 65 DPASPLRRQAIPRKEEFHFLSYESADPLCEQEYSPLPRLIHRYEDRALFLASDRCALYCR 124 Query: 111 FCFRREMVGSQ---KGTVLSSKDTEA-------ALAYIQEKSQIWEVIFTGGDPLILSHK 160 CFRR G V + KD + A Y++++ +I E++ +GGDPL+L Sbjct: 125 HCFRRHFTGGAGQGDREVKNRKDRRSLFEAAQDAACYLEKRPEIRELLLSGGDPLMLPDG 184 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANHPYE 218 L +++ R + ILR +R+P V P RI P L +E G+ P+++ NHP E Sbjct: 185 TLFRLIDLFRKHRPDLILRIGTRMPAVLPSRITPVLA---RELGRRAPLFVVCQFNHPDE 241 Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278 S A+ A++RLA++GI +L+QSVLL+G+NDD E L L + R+ PYYL DLAA Sbjct: 242 VSPPAVEALARLADSGIPILNQSVLLRGVNDDRETLKVLSGALLAARVIPYYLFQGDLAA 301 Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 GTSH R I +G I+ SL++ +SGL P Y +DLPGG GKV I + +V + Sbjct: 302 GTSHLRAPILKGVSIMRSLRQCMSGLATPVYAVDLPGGGGKVSIPLDPVPRVEEREALLP 361 Query: 339 DHHNIVHDYP 348 N + YP Sbjct: 362 GPDNRLWPYP 371 >gi|42524711|ref|NP_970091.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100] gi|39576921|emb|CAE78150.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100] Length = 428 Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust. Identities = 116/320 (36%), Positives = 185/320 (57%), Gaps = 4/320 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLRH +L + D + ++ +++ TP A+L + I + Sbjct: 53 WQLRH-SLKTQDDFAQHFELSADEKAAFVGGKELFNVRTTPYYASLAKG-DAGQSIRQIL 110 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P + E+ ++ DP+G+ + ++HRY DR+L + +C VYCRFC R+ G Sbjct: 111 MPHRFEIEEGDQQMLDPLGERQNKAAPRLIHRYSDRVLFLITDICSVYCRFCTRKHFTG- 169 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q+ + +++ E AL+YI+ + I EVI +GGDPL +S K+L +VL LR I+HV+I+R Sbjct: 170 QEQAFIRNEEYEQALSYIRSHTGIREVILSGGDPLTVSDKQLDRVLGDLRAIEHVEIIRI 229 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P+V P R+ +L+Q LK+ KPV++ H NHP E + EA+ A+ RL + G+ +++Q Sbjct: 230 GSRMPVVCPMRVTEDLVQILKKH-KPVFLMSHFNHPDELTAEAVEALERLVDNGVPVMNQ 288 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL GIN+ P ++ L R + LR+KPYY+ D + GT H R ++E+ +I L Sbjct: 289 MVLLNGINNHPALVQALNRRLLFLRVKPYYMFQCDPSLGTDHLRTSVEDSLEIQKELWGH 348 Query: 301 ISGLCQPFYILDLPGGYGKV 320 +SGL P LD+P G GK Sbjct: 349 LSGLAMPNLSLDIPNGGGKT 368 >gi|268323533|emb|CBH37121.1| putative L-lysine 2,3-aminomutase [uncultured archaeon] Length = 515 Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust. Identities = 118/296 (39%), Positives = 176/296 (59%), Gaps = 12/296 (4%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE---DPIGDNNHSPL 86 +++ Y + + P +LI D I +Q +P EL E+ E DP+ + SP+ Sbjct: 34 KVTRKYPMRINPYYLSLIKERE--DAIWKQSMPDIMEL----EDEEGVPDPLHEEKDSPV 87 Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G+VHRYPDR+LL + + C +YCRFC R+ VG + + + YI+E+ +I + Sbjct: 88 SGLVHRYPDRVLLLVSNRCAMYCRFCTRKRRVGDPFKRI-KKEQVLQGIEYIREREEIRD 146 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 V+ +GGDPL+L+ L L+ L+ IKHV++LR +RVP PQRI L+ L+ P Sbjct: 147 VLISGGDPLLLNDDELAFFLERLKKIKHVEVLRIGTRVPCALPQRITDALLSLLRRY-HP 205 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 +YI H NHP EF+EE+ A S +A+AGI L Q+VLLKG+ND +++ L+R +R+ Sbjct: 206 LYINTHFNHPGEFTEESRKACSMIADAGIPLGDQTVLLKGVNDSVDVMNALIRGLWSMRV 265 Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 PYY++ DL GT HFR ++EG +I LK S L P +++D PGG GK+ I Sbjct: 266 TPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPHFVIDAPGGGGKIPI 320 Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 11/106 (10%) Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 P+YI +H HP E +E+ +S ++AG+ L + L++G+NDDP ++ L+ ++LR Sbjct: 387 PIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPRVIKELVHGLLKLR 446 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 +KPYYLH + EEG I+ SL+ SG+ P I+ Sbjct: 447 VKPYYLHAD-----------SEEEGLTIINSLRGFTSGMAVPHLIV 481 >gi|323701829|ref|ZP_08113499.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum nigrificans DSM 574] gi|323533133|gb|EGB23002.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum nigrificans DSM 574] Length = 422 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 117/306 (38%), Positives = 175/306 (57%), Gaps = 9/306 (2%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER---ED 76 + E ++ I ++ HY A++P L+ PI +Q IP +E+ E+ ED Sbjct: 92 LSAEDMNLIDQVGQHYRWAVSPYYLALVIISGLTGPIGKQAIPSIKEI----EDHSGVED 147 Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 P+G+ SP I RYPDR+++ + + C +YCR C RR +G + K +AAL Sbjct: 148 PMGEEFTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRRNIG-EVDVHKPRKVLQAALD 206 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196 YI+E +I +V+ TGGD L+L K++ +L L I HV+I R +R P+ PQRI P L Sbjct: 207 YIRENEEIRDVLITGGDALLLPDKQIDWLLTELDRIPHVEIKRIGTRTPVTMPQRITPTL 266 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 L E P+YI NHP E + EA A RL AG++L +Q+VLLK IN+ P+++ Sbjct: 267 CAIL-EKHPPIYINTQFNHPLEVTPEAKTACDRLVKAGVVLGNQAVLLKDINNHPDVMKR 325 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L ++ +++R++PYY+ H GT HF ++EEG I+ L+ SGL P YI++ P G Sbjct: 326 LNQSLLQIRVRPYYIFHAKNVKGTGHFITSVEEGIAIMDQLRGYTSGLAVPTYIINAPNG 385 Query: 317 YGKVKI 322 YGK I Sbjct: 386 YGKTPI 391 >gi|298571349|gb|ADI87692.1| L-lysine 2,3-aminomutase [uncultured Nitrospirae bacterium MY2-3C] Length = 419 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 116/317 (36%), Positives = 179/317 (56%), Gaps = 4/317 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +L S Q L ++ ++ +E++ Y +TP +LI+ NPNDPI RQ IP E Sbjct: 40 SLRSVQALGELLNLQPHEVARYQELTRRYHYRITPYYLSLIDFTNPNDPIRRQGIPDLSE 99 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ DP+ + S + G+VHRYPDR L + C +YCR C R+ M +G Sbjct: 100 LDFQRVGYSDPLEEEEDSQVPGLVHRYPDRALAIVTSKCAMYCRHCTRKRMW--HEGESF 157 Query: 127 SSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 S+D A + YI+ + I EVI +GGDPL ++ + L L LR I +++LR +R+P Sbjct: 158 RSRDELTAMIDYIRGEVGIREVIVSGGDPLTMNLQLLDWFLGELRAIPRLEVLRIGTRLP 217 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P I EL+Q L +P+++ NHP E + +I A R+ AGI + +QSVLL+ Sbjct: 218 VVLPMAITDELVQMLARH-RPLWLNTQFNHPNELTPASIEACDRILRAGIPVSNQSVLLR 276 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND E++ +L + ++PYYL D +G HFR +I +G +I+ ++ GLC Sbjct: 277 GVNDSVEVMKDLCHALQRVMVRPYYLFQCDPVSGAEHFRTSIWKGIEIIEMMRGHTGGLC 336 Query: 306 QPFYILDLPGGYGKVKI 322 P +++D PGG GKV + Sbjct: 337 IPTFVVDAPGGGGKVPL 353 >gi|297617606|ref|YP_003702765.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus lipocalidus DSM 12680] gi|297145443|gb|ADI02200.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus lipocalidus DSM 12680] Length = 417 Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 111/295 (37%), Positives = 172/295 (58%), Gaps = 4/295 (1%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 I ++ Y A++P +L+ N+P+ Q +P EL LP+ DP+ + SP Sbjct: 97 ITKVGRTYRWAVSPYYLSLVGDDYLNNPVYLQAVPDPREL--LPKGELDPMDEAGTSPAP 154 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 I RYPDR+++ + + C ++CR C RR +G S +D AAL YI +I +V Sbjct: 155 RITRRYPDRLIINVTNQCAMFCRHCQRRRNIGEIDQHA-SREDVRAALHYISGNPEIRDV 213 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + TGGD L+LS + L +L L I HV+I R +R+P+ PQR+ PEL + + + P+ Sbjct: 214 LITGGDALLLSDRTLDWILTELDRIPHVEIKRIGTRIPVTLPQRVTPELCEVISKH-PPI 272 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 Y+ NHP E + EA A L AG +L +Q+VLL+GIND P ++ L + +R++ Sbjct: 273 YVNTQFNHPLEVTPEAKQACDMLVQAGAVLGNQAVLLRGINDCPVVMKKLNHELLRIRVR 332 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 PYY+ HP GTSH ++IE+G +I+ +L+ SGL P YI++ PGG+GK+ + Sbjct: 333 PYYIFHPKAVRGTSHRWVSIEKGLEIMEALRGHTSGLAVPTYIINAPGGFGKIPL 387 >gi|218780437|ref|YP_002431755.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum alkenivorans AK-01] gi|218761821|gb|ACL04287.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum alkenivorans AK-01] Length = 353 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 118/291 (40%), Positives = 174/291 (59%), Gaps = 6/291 (2%) Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91 + Y + +T +LI N DPIARQ IP EEL+ DP+ + + SP+ G++H Sbjct: 42 AETYPMRITKYFLSLIREQN--DPIARQVIPSAEELSDA-SLSPDPLCEEDQSPVPGLIH 98 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 RYP +L ++ + C VYCR C R+ VG K ++++ + YI+ +I EV+ +G Sbjct: 99 RYPHHVLFQVENRCAVYCRHCLRKRKVGGVKP--VTAEALAQGVDYIRSNQEIREVVLSG 156 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 GDPL++ +L +L+ LR I HV+ LR HSR+P V PQRI PEL + L + P+Y+ I Sbjct: 157 GDPLVMEDDKLLDLLRRLRAINHVRTLRVHSRIPGVLPQRITPELAKGLADF-HPLYMNI 215 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271 NHP E + E+ A LA+ G+ L Q+VLLKG+NDD +L LM + +R++PYYL Sbjct: 216 QFNHPREITPESEEACRILADQGVPLGCQTVLLKGVNDDEAVLRELMEELLRIRVRPYYL 275 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 H D G +HF + I G K++ +L+ I G P Y++DLPGG GK + Sbjct: 276 HQLDRVKGAAHFHVPISRGVKLMQALRGSIPGTAIPHYVVDLPGGGGKAPL 326 >gi|134299994|ref|YP_001113490.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum reducens MI-1] gi|134052694|gb|ABO50665.1| glutamate 2,3-aminomutase [Desulfotomaculum reducens MI-1] Length = 422 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 113/300 (37%), Positives = 175/300 (58%), Gaps = 9/300 (3%) Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER---EDPIGDNN 82 + I+++ Y A++P L P+ Q IP EE+ ++R EDP+G+ Sbjct: 98 EAIEKVGRQYRWAVSPYYMALAMVSGSGGPVWLQAIPCIEEV----KDRYGVEDPMGEEY 153 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 SP++G+ RYPDR+++ + + C +YCR C RR +G + S K E AL YI+E Sbjct: 154 TSPVEGVTRRYPDRLIINVTNQCAMYCRHCQRRRNIG-EIDVHKSRKVLEGALQYIRENK 212 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 +I +V+ TGGD L+LS ++++ +L L I HV+I R +R P+ PQRI PEL + L E Sbjct: 213 EIRDVLITGGDALLLSDRQIEWLLTELDNIPHVEIKRLGTRTPVTMPQRITPELCKIL-E 271 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 P+YI NHP E + EA A L AG++L +Q+VLLK IN+ P+++ L ++ + Sbjct: 272 NHPPIYINTQFNHPLEVTPEAKKACDMLVKAGVVLGNQAVLLKNINNQPDVMKRLNQSLL 331 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 +R++PYY+ H GT HF +++G I+ L+ SGL P YI++ P GYGK + Sbjct: 332 TIRVRPYYIFHAKAVKGTRHFITGVDDGIAIMEQLRGYTSGLAVPTYIINAPNGYGKTPV 391 >gi|310778246|ref|YP_003966579.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926] gi|309747569|gb|ADO82231.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926] Length = 418 Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust. Identities = 123/331 (37%), Positives = 182/331 (54%), Gaps = 4/331 (1%) Query: 17 ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED 76 NL +KE+ +EIK + Y A++P A LI+P N D I +P E PE D Sbjct: 80 VNLTEKEK-EEIKNVGATYRWAISPYYAALIDPENKYDSIRLLSVPTGSEA-AHPEGEVD 137 Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 P+G+ +P I RYPDR+++ + C +YCR C RR +G + T S ++ Sbjct: 138 PMGEEFTNPAGSITRRYPDRLIINTTNECAMYCRHCQRRRNIG-ETDTHKSDAVIMESID 196 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196 YI+ +I +V+ TGGD L LS KRL+ +LK L+ I HV +R +R + PQRI EL Sbjct: 197 YIRNNPEIRDVLLTGGDVLCLSDKRLEWILKELKSIPHVDYIRLGTRTLVTMPQRITDEL 256 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 + LK+ +P+YI H NHP E + E A +LAN GI L +Q+VLL GIN+D ++ Sbjct: 257 VDMLKKY-QPIYINTHFNHPKEITPEVKEACDKLANGGISLGNQAVLLNGINNDKYVMRL 315 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L +++R++PYY+ H GT HF ++++G +I+ L+ SG+ P YI++ P G Sbjct: 316 LNHEMLKIRVRPYYIFHAKHVKGTLHFNTSVDDGIEIMEYLRGYTSGMAIPTYIINAPKG 375 Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 GK I + S I +V DY Sbjct: 376 QGKTPIMPQYLLSRSKNSVKIRTWEGVVIDY 406 >gi|260893262|ref|YP_003239359.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4] gi|260865403|gb|ACX52509.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4] Length = 427 Score = 213 bits (542), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 124/345 (35%), Positives = 193/345 (55%), Gaps = 12/345 (3%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TS + L + +E+ + I+++ Y A++P +L+ +P+ PI RQ +P EL Sbjct: 80 ITSVEVLEKLIPLTQEEKEAIRQVERVYRWAVSPYYLSLMG-EDPSCPIRRQALPSAAEL 138 Query: 68 NILPEERE----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 E E DP+ + SP GI RYPDR+++ + + C +YCR C RR +G + Sbjct: 139 -----EDEVGSLDPMAEEWTSPAPGITRRYPDRLIINVTNRCAMYCRHCQRRRNIG-EVD 192 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 + + E AL YI++ +I +V+ TGGD L+LS L +L L I HV+I R +R Sbjct: 193 RDRTRWELEEALEYIRQNKEIRDVLLTGGDALLLSDSVLDWLLTELDRIPHVEIKRIGTR 252 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+ PQRI L + L + P+Y+ NHP E ++EA AA RLA AG++L +Q+VL Sbjct: 253 VPVTLPQRITDNLCRILAKH-PPIYLNTQFNHPREITKEAKAACDRLAEAGVVLGNQAVL 311 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+N+ P I+ L + +++R++PYYL L GT+HF IEEG +I+ L+ SG Sbjct: 312 LRGVNNHPFIMRKLNQELLKIRVRPYYLFQAKLVKGTTHFVTPIEEGIEIMEYLRGYTSG 371 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 L P YI++ P G GK+ I + + + N + YP Sbjct: 372 LAVPTYIINAPQGLGKIPILPQYLLAIDEDHVVLRTWENKIVRYP 416 >gi|326792528|ref|YP_004310349.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427] gi|326543292|gb|ADZ85151.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427] Length = 437 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 114/297 (38%), Positives = 174/297 (58%), Gaps = 3/297 (1%) Query: 27 EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85 +I+ + +A++P +L++ HN NDPI +Q P ELNI P + DP+ + SP Sbjct: 57 DIERTLAQFPMAISPYYLSLVDIHNYDNDPIFKQCFPSVLELNISPCDMSDPLHEEVDSP 116 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 I HRYPDR+L + +VC +YCR C R+ VG ++ S + + YI+ I Sbjct: 117 APCITHRYPDRVLFHVSNVCGMYCRHCTRKRKVGDLD-SIPSKESLLQGIEYIKNTPVIR 175 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +V+ +GGDP +LS + +LK + I HV+++R +R P+V P RI EL+ LK+ Sbjct: 176 DVLLSGGDPFLLSDTMIDWLLKEITAIDHVEVVRIGTRTPVVLPFRITDELVSILKKYDN 235 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 +++ H NH E + EA AA+ +L AGI L +QSVLLKGIND I+ +L+ + Sbjct: 236 -IWLNTHFNHSREMTTEAGAALKKLKLAGIPLGNQSVLLKGINDCTYIMKDLLHKLILNG 294 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 ++PYYL+ DL+ G HFR I G +I+ +L+ SG P Y++D PGG GK+ + Sbjct: 295 VRPYYLYQCDLSEGLEHFRTNIGTGIEIMENLRGHTSGFAIPTYVIDAPGGGGKIPV 351 >gi|114566648|ref|YP_753802.1| lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337583|gb|ABI68431.1| L-lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 422 Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 118/330 (35%), Positives = 180/330 (54%), Gaps = 4/330 (1%) Query: 24 QIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNN 82 ++ IK +S A++P +LI+ N PI +Q +P E+ I + +DP+G+ Sbjct: 96 EVQTIKRVSKKVRWAISPYYLSLIDFENYAASPIYKQSVPSLHEI-IECKGEDDPMGEEM 154 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 SP I RYPDR+++ + + C +YCR C RR G + KD EAAL YI+ S Sbjct: 155 SSPAPRITRRYPDRLIINVTNQCAMYCRHCQRRRNFGETDNHA-AHKDLEAALQYIKNNS 213 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 +I +V+ TGGD L+LS + L +L L I HV+I R +R P+ PQRI L LK Sbjct: 214 EIRDVLITGGDALMLSDRTLDWLLGELDAISHVEIKRIGTRTPVTLPQRITANLCAVLKR 273 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 P+YI N P E + EA A RL AG++L +Q+VLLKGIND+ ++ L + + Sbjct: 274 H-TPIYINTQFNSPLEVTPEAKQACDRLIEAGVVLGNQAVLLKGINDNVHVMKKLNQELL 332 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 ++R++PYYL GT+HF + G I+ L+ SGL P Y+++ PGGYGK + Sbjct: 333 KIRVRPYYLFQAKEVKGTTHFISPVNTGLDIMKHLRGYTSGLAIPTYVINAPGGYGKTPV 392 Query: 323 DTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 + + + I+ +YP +++ Sbjct: 393 NPEYVLDINENEVIISTWQGKTFNYPHRNN 422 >gi|29899154|gb|AAP03121.1| arginine aminomutase [Streptomyces griseochromogenes] Length = 410 Score = 213 bits (541), Expect = 4e-53, Method: Compositional matrix adjust. Identities = 108/287 (37%), Positives = 165/287 (57%), Gaps = 4/287 (1%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 I E + Y ++TP A+L++P +P P+ +Q +P EL DP+GD + Sbjct: 57 IAETAGKYRWSVTPYYASLMDPDDPGCPVRQQAVPALGELMEFSGAEVDPVGDMYYRRTN 116 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS---SKDTEAALAYIQEKSQI 144 +VH+YPDR+++ + CPVYCR C R+ GT +D L YI + +I Sbjct: 117 RVVHKYPDRVIMLITEACPVYCRHCTRKFHTTDVDGTYFERNEGEDFSEDLRYIADHPEI 176 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 +V+ TGGDPL +L++++ LR I V+I+R SR P++ PQR+ PEL + L Sbjct: 177 RDVLLTGGDPLSYRDGKLEEIIAGLRAIPSVEIIRIGSRFPVLLPQRVTPELCEMLARY- 235 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 PV++ H NHP E + E+ AI RL GI + +Q+VLL+GINDD + LM + + Sbjct: 236 HPVWLNTHFNHPKEITPESERAIDRLLRHGIPVGNQTVLLRGINDDLGTMRRLMTELLRI 295 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 R++PYYL+H D G SHF ++E+G +I+ L+ I+G P Y+L Sbjct: 296 RVRPYYLYHCDNVTGVSHFMTSVEKGWEIMEGLQGHITGFGVPQYVL 342 >gi|325290800|ref|YP_004266981.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271] gi|324966201|gb|ADY56980.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271] Length = 416 Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 121/320 (37%), Positives = 186/320 (58%), Gaps = 4/320 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+H+ +T + L + Q EI ++ Y A++P +L + NP DP+ Q Sbjct: 71 WQLKHR-ITDVETLDGIVGLSAVQKKEISKVGRVYRWAISPYYLSLADFSNPLDPVLMQG 129 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E EDP+ + SP I RYPDR+++ + ++C +YCR C RR +G Sbjct: 130 LPTGMELEDDKGE-EDPMAEALTSPAPCITRRYPDRLIINVTNMCGMYCRHCQRRRNIG- 187 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + +D AALAY++E +I +V+ TGGD L+LS + L +L L I HV+I R Sbjct: 188 EIDSHKNRQDLSAALAYVRENPEIRDVLITGGDALLLSDETLDWLLNELHQIPHVEIKRL 247 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ P RI L+ L + P+Y+ NHP E + EA A+ RL +AG+IL +Q Sbjct: 248 GTRVPVTLPARITDHLVNILAKY-PPLYLNTQFNHPIEVTLEAKQAVDRLISAGVILGNQ 306 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGIN+ P I+ L + +++R++PYY+ H GT HF +I+EG ++ L+ Sbjct: 307 AVLLKGINNHPNIMKKLNQELLKIRVRPYYIFHAKNIKGTKHFIPSIQEGLAVMEHLRGY 366 Query: 301 ISGLCQPFYILDLPGGYGKV 320 SGL P YI++ P G GK+ Sbjct: 367 TSGLAVPTYIINAPKGGGKI 386 >gi|225847898|ref|YP_002728061.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense Az-Fu1] gi|225643772|gb|ACN98822.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense Az-Fu1] Length = 374 Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 113/318 (35%), Positives = 178/318 (55%), Gaps = 3/318 (0%) Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGDNNH 83 D K++S Y TP L + N DPI +Q +P ++E++ +E DP ++ Sbjct: 50 DVFKKVSQIYHFGTTPYYIFLADRTNLEDPILKQILPDEKEIDEKYQEGAFLDPFLEDEK 109 Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 SP+ G+ HRYPDR+L + + C VYCR C R+ M + + ++ + YI+ Sbjct: 110 SPVLGLTHRYPDRVLFRATNFCSVYCRHCMRKRMFLEDE-RARTKQEYDVMFEYIKSNKA 168 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I EV+ +GGDPL L +++++ ++K L I HV I+R SR + +P R E + + E Sbjct: 169 IKEVLVSGGDPLTLPNQKIEYIIKNLYEIDHVDIIRIGSRELVSNPFRFYDEELLEIFEK 228 Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 V+I H NHP E + E A+ + + G +L+Q+VLLKGINDD + NLMR+ ++ Sbjct: 229 YDKVWIVTHFNHPNEITSETKKAVKNILSTGTPVLNQTVLLKGINDDKYTMENLMRSLLK 288 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++IKPYYL H D G HF+ IE+G +I+ L+ ++SGL P + +DL G GKV + Sbjct: 289 VKIKPYYLFHCDPTKGVYHFKTGIEKGLEIMEHLRGRVSGLGNPTFAVDLVNGLGKVPLL 348 Query: 324 THNIKKVGNGSYCITDHH 341 + NG Y ++ Sbjct: 349 PEYLISKKNGFYEFKNYQ 366 >gi|52549348|gb|AAU83197.1| lysine 23-aminomutase [uncultured archaeon GZfos27A8] Length = 437 Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust. Identities = 111/295 (37%), Positives = 179/295 (60%), Gaps = 3/295 (1%) Query: 29 KEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 +++ + +++TP +LI+ + NDPI Q P EL I + +D + ++ SP+ Sbjct: 58 EKVLEKFPLSITPYYLSLIDYDDYKNDPIFIQAFPDPRELVISKYDIKDSLAEDKDSPVP 117 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 GI HRYPDR+L + ++C +YCR C R+ VG ++ + + + YI+ +I +V Sbjct: 118 GITHRYPDRVLFLISNICSMYCRHCTRKRRVGDVD-SIPNRSEILKGIEYIKNTPEIRDV 176 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + +GGDPL+LS L +L L+ I HV+++R +RVP V P RI +L+ LK+ P+ Sbjct: 177 LLSGGDPLMLSDSYLDWILTELQTIPHVEVIRIGTRVPAVLPYRITDDLVNMLKKH-HPL 235 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 +I NHP E + + A+ LA+AGI L +QSVLL G+ND P ++ L++ V+ R++ Sbjct: 236 WINTQFNHPREVTTSSREALRMLADAGIPLGNQSVLLAGVNDCPILMKRLVQRLVQNRVR 295 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 PYYL+ DL+ G +HFR + +G +I+ SL SG P Y++D PGG GK++I Sbjct: 296 PYYLYQCDLSEGLTHFRTPVGKGIEIIESLIGHTSGFAVPSYVIDAPGGGGKIRI 350 >gi|268323654|emb|CBH37242.1| hypothetical protein, radical SAM family [uncultured archaeon] Length = 515 Score = 212 bits (539), Expect = 7e-53, Method: Compositional matrix adjust. Identities = 118/296 (39%), Positives = 175/296 (59%), Gaps = 12/296 (4%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE---DPIGDNNHSPL 86 +++ Y + + P +LI D I +Q +P EL E+ E DP+ ++ SP+ Sbjct: 34 KVTRKYPMRINPYYLSLIKERE--DAIWKQSMPDIMEL----EDEEGVPDPLHEDKDSPV 87 Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G+VHRYPDR+LL + + C +YCRFC R+ VG + + + YI+E I + Sbjct: 88 SGLVHRYPDRVLLLVSNRCAMYCRFCTRKRKVGDPFKRI-KKEQVLQGIEYIREHEAIRD 146 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 V+ +GGDPL+L+ + L L+ L+ IKHV +LR +RVP PQRI L+ L+ P Sbjct: 147 VLISGGDPLLLNDEELAFFLERLKEIKHVDVLRIGTRVPCALPQRITDGLLSLLRRY-HP 205 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 +YI H NHP EF+EE+ A S +A+AGI L Q+VLLKG+ND +++ L+R +R+ Sbjct: 206 LYINTHFNHPGEFTEESRRACSMIADAGIPLGDQTVLLKGVNDSVDVMNALIRGLWSMRV 265 Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 PYY++ DL GT HFR ++EG +I LK S L P +++D PGG GK+ I Sbjct: 266 TPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPHFVIDAPGGGGKIPI 320 Score = 72.8 bits (177), Expect = 7e-11, Method: Compositional matrix adjust. Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 11/106 (10%) Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 P+YI +H HP E +E+ +S ++AG+ L + L++G+NDDP+++ L+ ++LR Sbjct: 387 PIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPKVIKELVHGLLKLR 446 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 +KPYYLH + EEG I+ SL+ SG+ P I+ Sbjct: 447 VKPYYLHAD-----------SEEEGLTIINSLRGFTSGMAVPHLIV 481 >gi|327538979|gb|EGF25616.1| KamA family protein [Rhodopirellula baltica WH47] Length = 381 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 102/280 (36%), Positives = 165/280 (58%), Gaps = 2/280 (0%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A + P +PNDP+ RQ +P EE N DP+GD + + G++H+Y R L Sbjct: 104 FAARMKPGDPNDPLLRQVLPLPEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITT 163 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C ++CR+CFRRE S+ + E AL Y++E I EV+ +GGDPL L+ + Sbjct: 164 GACGIHCRYCFRREFPYSENSS--RGDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSV 221 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 K+++ + I HV+ LR+H+R+PIV P R+ I+ ++ + ++ +H NHP E E Sbjct: 222 AKLMQQIESIPHVRRLRWHTRMPIVIPSRVTDAWIERMQASRLTSWVVVHCNHPAELDSE 281 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 AA+ RL +AGI +L+Q+VLL+G+NDD ++L +L R ++LR+ PYYLH D G +H Sbjct: 282 TGAALMRLVDAGIPVLNQAVLLRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAH 341 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 F + E G+ +V+ L+ ++ G P ++ + G K ++ Sbjct: 342 FEVDQECGRALVSQLESRLPGFAVPRFVCEQAGQASKTRL 381 >gi|327398266|ref|YP_004339135.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411] gi|327180895|gb|AEA33076.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411] Length = 304 Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust. Identities = 113/278 (40%), Positives = 168/278 (60%), Gaps = 9/278 (3%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 I QF K EL +DP+G+ HS KG++HRY DR++L + + C YCRFCFR+ Sbjct: 18 IKSQFCFSKGEL--FLNGNKDPLGEKKHSKAKGLIHRYTDRVVLTVTNKCFAYCRFCFRK 75 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 S +G L E ++ Y+++ + EV+ +GGDP LS+K+L ++L +R IKH+ Sbjct: 76 NNWQSFEGFSL-----EESVNYLKKTKNVREVLISGGDPFFLSNKKLAEILTAIRSIKHI 130 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235 +R SRV P RI+ + + LK KP++IA H NHP E ++E + L ++GI Sbjct: 131 STIRIGSRVLSSLPIRIDNQTAEMLK-LFKPIWIAAHINHPDEITDEFKKSARLLLDSGI 189 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 ++SQ+VLLK IND+ L L + V++ IKPYYL D A G FR++I++ ++ Sbjct: 190 PIVSQTVLLKNINDNETTLKKLFCSLVDIGIKPYYLFGCDQAVGNGIFRVSIDKALSLME 249 Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHN-IKKVGN 332 L+ KISGLC P + DLP GYGKV ++ + IK+ GN Sbjct: 250 KLRGKISGLCMPTFSFDLPSGYGKVTLEPNRIIKRNGN 287 >gi|183221183|ref|YP_001839179.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911274|ref|YP_001962829.1| lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775950|gb|ABZ94251.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779605|gb|ABZ97903.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 402 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 111/292 (38%), Positives = 170/292 (58%), Gaps = 4/292 (1%) Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 ++ TP +L +P +PN PI R +P KEE EE DP+ + SP++G+ H YP+R Sbjct: 61 VSTTPYYLSLSDPSDPNCPIRRMIVPTKEEAIFSLEESADPLEEERLSPVRGLTHMYPNR 120 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +LL H C VYCR C R V S + + S D E+A YI+ +I +V+ +GGDPL Sbjct: 121 VLLFSNHSCSVYCRHCMRGRKVSSNEERMEKS-DLESAFDYIRNHPEIEDVVVSGGDPLN 179 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIHA 213 L+ R++ +LK L I HV+I R +R P+ P RI + Q +++ ++ Sbjct: 180 LADLRIEWILKELNQIPHVKICRLGTRNPVTLPFRITDAICQIIEKYNDDNLSIFCNTQF 239 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E ++E AI +L G+ + +Q+VLLKGINDD E + L + +E+R++ YYL+ Sbjct: 240 NHPKECTKETKEAILKLLKVGVSVGNQAVLLKGINDDEETMLTLHKKLLEMRVRAYYLYD 299 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 P+L G+ FR + G +IV ++ KI G+ P ++ DLPGG GK+ I + Sbjct: 300 PELIPGSRGFRTPLARGIEIVEYMRGKIGGMGIPQFVNDLPGGGGKITIGAN 351 >gi|85858714|ref|YP_460916.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB] gi|85721805|gb|ABC76748.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB] Length = 339 Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 114/328 (34%), Positives = 180/328 (54%), Gaps = 9/328 (2%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQI--DEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q+R++ + Q A L+K+ I ++ + Y ++TP +LI +P+DPI Q Sbjct: 12 QVRNRIRSGRQ---LAELLKEAPIAAGSLRAVIRTYPFSITPYYFSLIREGDPDDPIRFQ 68 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E++ +DP+ ++ P+ G++HRY DR L+ C +YCR C R+ Sbjct: 69 CVPDPREVSFSLGGVDDPLEESRDMPVPGLIHRYADRCLIMATSKCMMYCRHCNRKR--- 125 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 K A + Y+ I EVI +GGDPL L K L + L LR I HV++LR Sbjct: 126 RWKAGAADRAPLRAMIDYVAATPGIREVIVSGGDPLTLPEKVLDEFLGALRAIPHVEVLR 185 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 SR+P+V P RI L++ L++ +P++ N P E + E+ A RL +AGI + + Sbjct: 186 IGSRIPVVLPMRITVPLVRILRKH-RPLWFNTQFNSPREITPESAEACERLVDAGIPVSN 244 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLKGINDD E + L+ + ++PYYL D G HFR+ +G +++ + Sbjct: 245 QSVLLKGINDDYETMRRLLYGLQRISVRPYYLFQCDPVRGADHFRVDFWKGMEMMERISR 304 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNI 327 + SGLC P Y++D+PGG GK+ + T ++ Sbjct: 305 QTSGLCLPRYVIDVPGGKGKMSLQTFSL 332 >gi|332297913|ref|YP_004439835.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense DSM 12168] gi|332181016|gb|AEE16704.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense DSM 12168] Length = 357 Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust. Identities = 117/309 (37%), Positives = 178/309 (57%), Gaps = 14/309 (4%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P + RQ++P EE N+LP E DP+G + + +VH+Y +R+LL C YCR Sbjct: 47 SPFYALRRQYVPSIEEKNVLPCELSDPLGAHRYQITPRLVHQYKNRVLLLTTARCFAYCR 106 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 CFRR ++G + ++ EA AY+ ++ E++F+GGDPL S+ L+++++ +R Sbjct: 107 HCFRRTYTSRKQGFITDAECGEAC-AYLSSHPEVQEILFSGGDPLTASNDALRQLIRRVR 165 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE----FSEEAIAA 226 + ++R +R PI +P+R + ELI KE P+++ H NHP E FS E+ A Sbjct: 166 RARPGILIRICTRAPIAEPERFDSELIALFKE-NAPLWVIPHVNHPAEISNRFSPESYRA 224 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 +S L +AGI + SQ+VLL+G+ND +LA L + IKP YL DLA GTSH R+ Sbjct: 225 LSGLVSAGIPVQSQTVLLRGVNDSVPVLAQLFHELTCMGIKPGYLFQGDLAPGTSHLRVP 284 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV---KIDTH----NIKKVGNGSYCITD 339 I EG K+ L+ ++SGL P Y +DLPGG GK+ ++D + + GN Y TD Sbjct: 285 IREGVKLYERLRGELSGLSTPVYAVDLPGGGGKINLLQLDPELLRTGVSQNGN-DYLFTD 343 Query: 340 HHNIVHDYP 348 + YP Sbjct: 344 ANGNGWTYP 352 >gi|83589322|ref|YP_429331.1| L-lysine 2,3-aminomutase [Moorella thermoacetica ATCC 39073] gi|83572236|gb|ABC18788.1| glutamate 2,3-aminomutase [Moorella thermoacetica ATCC 39073] Length = 415 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 120/326 (36%), Positives = 185/326 (56%), Gaps = 13/326 (3%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H+ +TS L + + + + I ++ Y A++P +L+ P P+ PI RQ Sbjct: 64 WQLTHR-ITSVATLAELIPLTEAEKEAILKVERTYRWAVSPYYLSLMGPE-PDCPIRRQA 121 Query: 61 IPQKEEL----NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116 +P EL +L DP+ + SP I RYPDR+++ + + C +YCR C RR Sbjct: 122 LPSAAELEDNHGVL-----DPMDEELTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRR 176 Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 +G + S ++ E AL YI++ +I +V+ TGGD L+LS + +L L I HV+ Sbjct: 177 NIGEVDRS-RSRRELEQALQYIRQNEEIRDVLITGGDALMLSDAMIDWLLTELDNIPHVE 235 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 I R +RVP+ PQRI PEL + L + P+Y+ NHP E + A A RL AG++ Sbjct: 236 IKRLGTRVPVTMPQRITPELCRVLAK-HPPIYLNTQFNHPREVTAAAKEACDRLVQAGVV 294 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 L +Q+VLLKG+N+ P ++ L + +++R++PYY+ H GT+HF +IEEG +I+ Sbjct: 295 LGNQAVLLKGVNNHPFVMRKLNQELLKIRVRPYYIFHAKPVKGTTHFITSIEEGVEIMDK 354 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322 L+ SGL P YI++ P G GK I Sbjct: 355 LRGYTSGLAVPTYIINAPHGLGKTPI 380 >gi|296133315|ref|YP_003640562.1| lysine 2,3-aminomutase YodO family protein [Thermincola sp. JR] gi|296031893|gb|ADG82661.1| lysine 2,3-aminomutase YodO family protein [Thermincola potens JR] Length = 448 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 118/328 (35%), Positives = 182/328 (55%), Gaps = 3/328 (0%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 ++I++IK++ + A++P A+L++ +P+ P+ Q IP EL + ++DP+G+ Sbjct: 111 KEIEDIKKVGQKFRWAISPYYASLMSERDPSCPVRLQAIPSILEL-LDQSGKDDPMGEEF 169 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 SP I RYPDR+++ + + C +YCR C RR +G S + +AA+ YI+ Sbjct: 170 TSPAPCITRRYPDRLIINVTNQCAMYCRHCQRRRNIGEVDRNKPRS-EIKAAIEYIRANP 228 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 +I +V+ TGGD L+LS+ L +L L I HV+I R +R + PQRI P+L + L E Sbjct: 229 EIRDVLITGGDALLLSNSELDWILTQLDSIPHVEIKRIGTRTLVSMPQRITPQLCEIL-E 287 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 P+YI NHP E + A +L AG +L +Q+VLL GIN++ ++ L + Sbjct: 288 KHPPLYINTQFNHPKEITPAVAEACDKLIKAGAVLGNQAVLLNGINNNVHVMKKLNHELL 347 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 ++RI+PYY+ H GTSHF +EEG KI+ L+ SGL P YI++ P GYGK + Sbjct: 348 KVRIRPYYIFHAKTVTGTSHFITKVEEGIKIMEKLRGYTSGLAVPTYIINAPKGYGKTPM 407 Query: 323 DTHNIKKVGNGSYCITDHHNIVHDYPPK 350 + G I V YP K Sbjct: 408 LPEYLISSGEDEIVIRTWEKKVISYPNK 435 >gi|32471298|ref|NP_864291.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1] gi|32443139|emb|CAD71970.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1] Length = 381 Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust. Identities = 101/280 (36%), Positives = 164/280 (58%), Gaps = 2/280 (0%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A + P +PNDP+ RQ +P EE N DP+GD + + G++H+Y R L Sbjct: 104 FAARMKPGDPNDPLLRQVLPLPEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITT 163 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C ++CR+CFRRE S+ + E AL Y++E I EV+ +GGDPL L+ + Sbjct: 164 GACGIHCRYCFRREFPYSENSS--RGDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSV 221 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 K+++ + I HV+ LR+H+R+PIV P R+ I ++ + ++ +H NHP E E Sbjct: 222 AKLMQQIESIPHVRRLRWHTRMPIVIPSRVTDAWIVRMQASRLTSWVVVHCNHPAELDSE 281 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 AA+ RL +AG+ +L+Q+VLL+G+NDD ++L +L R ++LR+ PYYLH D G +H Sbjct: 282 TGAALMRLVDAGVPVLNQAVLLRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAH 341 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 F + E G+ +V+ L+ ++ G P ++ + G K ++ Sbjct: 342 FEVDQECGRALVSQLESRLPGFAVPRFVCEQAGQASKTRL 381 >gi|294496089|ref|YP_003542582.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219] gi|292667088|gb|ADE36937.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219] Length = 437 Score = 209 bits (531), Expect = 6e-52, Method: Compositional matrix adjust. Identities = 113/304 (37%), Positives = 184/304 (60%), Gaps = 3/304 (0%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPI 78 K E+ D++K+ + +++TP +LI+ + NDPI Q P +EL+I ++ EDP+ Sbjct: 49 FKAEEKDKLKQTLEKFPLSVTPYYLSLIDTDDFRNDPIFLQAFPSPKELDIDEDDLEDPL 108 Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 ++ SP++GI HRYPDR+L + + C +YCR C R+ VG ++ + L YI Sbjct: 109 SEDEDSPVEGITHRYPDRVLFHISNTCSMYCRHCTRKRKVGDVD-SIPTRDAVSEGLEYI 167 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 + + +V+ +GGDP +L L +L LR I HV+I+R +R+P+V P R+ +L++ Sbjct: 168 RNTPHVRDVLLSGGDPFMLPDAYLDWILTKLREIPHVEIIRIGTRMPVVLPYRVTDDLVE 227 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 LK+ P++I H NHP E + + A+ +LA+AGI L +Q+VLL G+ND I+ +L+ Sbjct: 228 ILKKH-HPLWINTHFNHPREVTASSREALRKLADAGIPLGNQTVLLSGVNDCHRIMKSLV 286 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318 V+ R++PYYL+ DL+ G SHFR + +G +I+ L SG P Y++D P G G Sbjct: 287 HKLVQNRVRPYYLYQCDLSEGLSHFRTPVGKGIEIMEHLIGHTSGFAVPTYVIDAPHGGG 346 Query: 319 KVKI 322 K+ + Sbjct: 347 KIPV 350 >gi|281355041|ref|ZP_06241535.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis ATCC BAA-548] gi|281317921|gb|EFB01941.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis ATCC BAA-548] Length = 341 Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust. Identities = 108/298 (36%), Positives = 169/298 (56%), Gaps = 4/298 (1%) Query: 27 EIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85 E++ + Y + L LI+P + NDPIARQ +P +EL L DP+ + P Sbjct: 21 EMERVEPTYPVYLNDYYLGLIDPADWRNDPIARQSLPDPQELADL-SSSYDPLAEEEQMP 79 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 ++HR+ DR++L C + CRFCFR R + LS + A+ Y+ + Sbjct: 80 TPHLIHRFVDRVVLLATGRCAMRCRFCFRKRAWTSGMELADLSDEQLAGAVGYLTAHPAV 139 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 EV+ +GGDPL+L RL+ ++ + + +Q++R SR+P+V P+R+ E+ + Sbjct: 140 KEVLISGGDPLMLPFGRLKAIVDAVAAVPSIQVIRIGSRMPVVWPERVTAEIAEYFGSIP 199 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 ++ A H NHP E + EA AA RL AG+ +++QSVLLKG+NDD E+L L R V + Sbjct: 200 G-LWFATHFNHPREVTPEAAAACGRLVRAGVPVVNQSVLLKGVNDDAELLEELFRKLVAI 258 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 R+KP+YL H D G HF +E+G +I+ + + ++S L P + +DLP G GKV + Sbjct: 259 RVKPHYLFHVDPVRGVRHFATGVEKGLQILRAFRPRLSSLAVPTFAIDLPEGGGKVAL 316 >gi|116327784|ref|YP_797504.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331557|ref|YP_801275.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120528|gb|ABJ78571.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125246|gb|ABJ76517.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 420 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 110/290 (37%), Positives = 173/290 (59%), Gaps = 4/290 (1%) Query: 36 SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95 +++ TP +L +P +P+DPI + IP++ E PEE DP+ + SP+KG+ H YPD Sbjct: 67 NVSATPYYISLTDPEDPDDPIRKMIIPREAETVFSPEESPDPLHEERLSPVKGLTHMYPD 126 Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R+LL H C VYCR C R V K +++ +D EA YI+ +I +V+ +GGDPL Sbjct: 127 RVLLFTNHECSVYCRHCMRGRKVSDSKERMIT-EDLEACFEYIEACPEITDVVLSGGDPL 185 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIH 212 LS ++ ++L+ L I+HV+I R +R P+ P RI +L ++ ++ Sbjct: 186 NLSDSKIDRILERLEKIEHVKICRLGTRNPVTLPFRITSDLCNIIESHNTHRLSIFCNTQ 245 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 NH E + EA AI +L AG+ + +Q VLLKGIND EI+ L + +ELR++ YY++ Sbjct: 246 FNHAKECTSEAKEAILKLLKAGVNVGNQCVLLKGINDSGEIMLELHKKLLELRVRAYYMY 305 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 P+L G+ FR + +G +I++ ++ KI G+ P ++ DLPGG GKV + Sbjct: 306 DPELIPGSRGFRTPLAKGIEIISYMRGKIGGMGIPQFVNDLPGGGGKVTL 355 >gi|147676951|ref|YP_001211166.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI] gi|146273048|dbj|BAF58797.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI] Length = 423 Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 117/324 (36%), Positives = 181/324 (55%), Gaps = 9/324 (2%) Query: 1 MQLRHKTLTSAQ--DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q+ H+ S +L+ N + Q +IK + Y A++P A+L+ +DPI Sbjct: 75 WQMSHRISDSGALAELFGFNEM---QCAQIKRVGMRYRWAISPYYASLMEGDIEHDPIRL 131 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q +P EELN DP+ + SP + RYPDR+++ + + C +YCR C RR + Sbjct: 132 QSVPSIEELN--ETGHPDPMAEELTSPAPCVTRRYPDRLIINVTNKCAMYCRHCQRRRNI 189 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G + + AAL YI++ +I +V+ TGGD L+LS ++ +L L IKHV+I Sbjct: 190 G-EVDRHSPHESLVAALEYIRKNREIRDVLITGGDALLLSDSKIDWLLSELDKIKHVEIK 248 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R +R + PQRI PEL LK+ P+Y+ NHP E + E+ A LA AG++L Sbjct: 249 RLGTRAIVTLPQRITPELCDVLKKH-PPIYVNTQFNHPREVTPESKQACDMLAEAGVVLG 307 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKG+N+DP ++ L + +++ ++PYY+ H GT HF ++EG I+ L+ Sbjct: 308 NQAVLLKGVNNDPHVMKKLNQELLKIMVRPYYIFHAKPVKGTLHFITAVDEGISIMEKLR 367 Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322 SGL P YI++ P GYGK + Sbjct: 368 GYTSGLAVPTYIINAPNGYGKTPV 391 >gi|188586383|ref|YP_001917928.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351070|gb|ACB85340.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 412 Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust. Identities = 112/332 (33%), Positives = 183/332 (55%), Gaps = 6/332 (1%) Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77 NL + E+ EI+++ Y A++P A+L++P +P P+ +Q IP +E+ DP Sbjct: 80 NLTESER-QEIEQVGKDYRWAVSPYYASLMDPDDPECPVRKQSIPSAQEVKD-KAGVTDP 137 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALA 136 + + +P + RYPDR+++ + + C +YCR C R+ +G + KD E ++ Sbjct: 138 MAEEFTNPAGNVTRRYPDRLIINVTNQCAMYCRHCQRKRNIGEVDKP--TPKDVLEESIE 195 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196 Y++ ++I +V+ TGGD +LS + L +L LR I HV+I+R SR P+ PQRI L Sbjct: 196 YVKNHAEIRDVLLTGGDAFMLSDETLDWLLTELRKIPHVEIIRLGSRTPVTMPQRITQNL 255 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 L + P+Y+ NHP E + EA A +LA AG+ L +Q+VLL IN+DP ++ Sbjct: 256 CDILTKH-LPLYVNTQYNHPKELTAEAKKATFKLARAGVGLGNQAVLLNTINNDPHVMKT 314 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L ++ ++PYY+ H GT+HF +E+G +I+ ++ SG+ P YI++ P G Sbjct: 315 LCHELLKGMVRPYYIFHAKKVKGTTHFNTRVEDGLEILEKMRGYTSGMAIPSYIINAPDG 374 Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 +GK I + G I N V +YP Sbjct: 375 HGKTPIVPEYMISQGRDKVYIRTWENRVFEYP 406 >gi|302875509|ref|YP_003844142.1| lysine 2,3-aminomutase YodO family protein [Clostridium cellulovorans 743B] gi|307687963|ref|ZP_07630409.1| lysine 2,3-aminomutase YodO family protein [Clostridium cellulovorans 743B] gi|302578366|gb|ADL52378.1| lysine 2,3-aminomutase YodO family protein [Clostridium cellulovorans 743B] Length = 424 Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 120/330 (36%), Positives = 183/330 (55%), Gaps = 7/330 (2%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + +E+ + IK++ Y ++P A+LI+ N N P+ Q +P ELN E DP+G Sbjct: 85 LSEEEAEHIKKVEQKYRWGISPYYASLIDESNSN-PVKLQCVPTLFELN--DEGTLDPMG 141 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYI 138 + SP I RYPDR+++ + ++C +CR C RR +G K +S D E ++ YI Sbjct: 142 EEYTSPAGTITRRYPDRLIINVTNMCASFCRHCQRRRNIGIVDKHQSIS--DLEESIEYI 199 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 + +I +V+ TGG+PL+LS + +L L IK ++ +R +RV PQRI L+ Sbjct: 200 RNNREIRDVLITGGEPLLLSDGMIDWLLGELFKIKTLEYVRIGTRVLATLPQRITANLLS 259 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 LK+ P+YI NHP E + EA A +LAN GI L +Q+VLL GIN+D ++ L Sbjct: 260 ILKKYS-PLYINTQFNHPLEITREAKEACDKLANIGIPLGNQTVLLNGINNDKYVMRLLN 318 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318 + ++ RIKPYY+ H GT+HF +I++G +I+ L+ SG+ P YI++ P G G Sbjct: 319 QELLKCRIKPYYIFHGKKIMGTTHFNTSIDDGIEIMEYLRGYTSGMAIPTYIINAPNGNG 378 Query: 319 KVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 K I I G + I + DYP Sbjct: 379 KTPILPQYIISRGKNNVKIRTWEGKIFDYP 408 >gi|307824010|ref|ZP_07654237.1| lysine 2,3-aminomutase YodO family protein [Methylobacter tundripaludum SV96] gi|307734794|gb|EFO05644.1| lysine 2,3-aminomutase YodO family protein [Methylobacter tundripaludum SV96] Length = 336 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 108/272 (39%), Positives = 154/272 (56%), Gaps = 2/272 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ +P KEEL P DP+GD + G++H+Y R+L C + CR Sbjct: 66 NPHDPLLRQVLPIKEELFAYPGFSNDPVGDLAAATQVGVLHKYHGRVLFINTGSCAINCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR LS + +AA+ IQ+ I EVI +GGDPL+LS RL ++++ L Sbjct: 126 YCFRRNF--PYADLQLSKQKEDAAIQAIQDDPSISEVILSGGDPLLLSDSRLTRLIRQLD 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKH++ +R HSR+PIV P RI E I L ++ K + I +H NH E S+ IAA + L Sbjct: 184 GIKHLKRIRIHSRLPIVLPARITDEFINTLTQSPKQIIIIVHCNHANEISDRVIAACASL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 N+GI L +QSVLL+G+ND+ E+L L I PYYLH D A GT HF ++ E Sbjct: 244 KNSGITLFNQSVLLRGVNDNAEVLGELSEQLFSHGITPYYLHLLDKATGTGHFEVSEAEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 ++ ++ + G P + + G K I Sbjct: 304 LALMHQVQAALPGYLVPKLVKEQAGATSKQTI 335 >gi|126699870|ref|YP_001088767.1| L-lysine 2,3-aminomutase [Clostridium difficile 630] gi|254975845|ref|ZP_05272317.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-66c26] gi|255093232|ref|ZP_05322710.1| L-lysine 2,3-aminomutase [Clostridium difficile CIP 107932] gi|255307270|ref|ZP_05351441.1| L-lysine 2,3-aminomutase [Clostridium difficile ATCC 43255] gi|255314974|ref|ZP_05356557.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-76w55] gi|255517649|ref|ZP_05385325.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-97b34] gi|255650759|ref|ZP_05397661.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-37x79] gi|260683845|ref|YP_003215130.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196] gi|260687505|ref|YP_003218639.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291] gi|306520670|ref|ZP_07407017.1| lysine 2,3-aminomutase YodO family protein [Clostridium difficile QCD-32g58] gi|115251307|emb|CAJ69138.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Clostridium difficile] gi|260210008|emb|CBA64044.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196] gi|260213522|emb|CBE05249.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291] Length = 422 Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust. Identities = 113/302 (37%), Positives = 175/302 (57%), Gaps = 4/302 (1%) Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78 L KKE+ + IKE+ + A++P +LI+P + DPI IP EL +E DP+ Sbjct: 80 LTKKEK-EYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSIPTHIELED-EQEDLDPM 137 Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 G+ +P I RYPDR+++ + + C +YCR C RR +G Q+ + S + ++ YI Sbjct: 138 GEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG-QQDSHKSKAIIQESIDYI 196 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 +E +I +V+ TGGD L L L+ +L L+ I HV +R +R + PQRI E Sbjct: 197 RENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRLGTRTLVTMPQRITDEFCN 256 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 LK+ PVYI H NHP E ++E+ A +LANAG+ L +Q+VLL GIN+D ++ L Sbjct: 257 MLKKY-HPVYINTHFNHPMEITKESKEACEKLANAGVPLGNQAVLLNGINNDKFVMRCLN 315 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318 + +++R+KPYY+ GT HF ++++G +I+ L+ SG+ P YI++ P G G Sbjct: 316 QELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGYTSGMAIPTYIVNAPKGGG 375 Query: 319 KV 320 K Sbjct: 376 KT 377 >gi|255656236|ref|ZP_05401645.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-23m63] gi|296450329|ref|ZP_06892088.1| lysine 2,3-aminomutase [Clostridium difficile NAP08] gi|296878741|ref|ZP_06902744.1| lysine 2,3-aminomutase [Clostridium difficile NAP07] gi|296260822|gb|EFH07658.1| lysine 2,3-aminomutase [Clostridium difficile NAP08] gi|296430248|gb|EFH16092.1| lysine 2,3-aminomutase [Clostridium difficile NAP07] Length = 422 Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust. Identities = 112/302 (37%), Positives = 175/302 (57%), Gaps = 4/302 (1%) Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78 L KKE+ + IKE+ + A++P +LI+P + DPI IP EL +E DP+ Sbjct: 80 LTKKEK-EHIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSIPTYIELED-EQEDLDPM 137 Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 G+ +P I RYPDR+++ + + C +YCR C RR +G Q+ + S + ++ YI Sbjct: 138 GEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG-QQDSHKSKAIIQESIDYI 196 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 +E +I +V+ TGGD L L L+ +L L+ I HV +R +R + PQRI E Sbjct: 197 RENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRLGTRTLVTMPQRITDEFCN 256 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 LK+ P+YI H NHP E ++E+ A +LANAG+ L +Q+VLL GIN+D ++ L Sbjct: 257 MLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQAVLLNGINNDKFVMRCLN 315 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318 + +++R+KPYY+ GT HF ++++G +I+ L+ SG+ P YI++ P G G Sbjct: 316 QELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGYTSGMAIPTYIVNAPKGGG 375 Query: 319 KV 320 K Sbjct: 376 KT 377 >gi|255101396|ref|ZP_05330373.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-63q42] Length = 422 Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust. Identities = 112/302 (37%), Positives = 175/302 (57%), Gaps = 4/302 (1%) Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78 L KKE+ + IKE+ + A++P +LI+P + DPI IP EL +E DP+ Sbjct: 80 LTKKEK-EYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLSIPTHIELED-EQEDLDPM 137 Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 G+ +P I RYPDR+++ + + C +YCR C RR +G Q+ + S + ++ YI Sbjct: 138 GEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG-QQDSHKSKAIIQESIDYI 196 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 +E +I +V+ TGGD L L L+ +L L+ I HV +R +R + PQRI E Sbjct: 197 RENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRLGTRTLVTMPQRITDEFCN 256 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 LK+ P+YI H NHP E ++E+ A +LANAG+ L +Q+VLL GIN+D ++ L Sbjct: 257 MLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQAVLLNGINNDKFVMRCLN 315 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318 + +++R+KPYY+ GT HF ++++G +I+ L+ SG+ P YI++ P G G Sbjct: 316 QELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGYTSGMAIPTYIVNAPKGGG 375 Query: 319 KV 320 K Sbjct: 376 KT 377 >gi|150390499|ref|YP_001320548.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus metalliredigens QYMF] gi|149950361|gb|ABR48889.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus metalliredigens QYMF] Length = 422 Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 114/330 (34%), Positives = 186/330 (56%), Gaps = 5/330 (1%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + ++I++IK++ + +++P LI+ +N PI IP E+ + DP+ Sbjct: 85 LDDKEIEDIKKVGQEFRWSVSPYYTTLIDDNNKYCPIKLMAIPHGYEIANTKGD-TDPMA 143 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYI 138 + +P I RYPDR+++ + + C +YCR C RR +G+ + +S++ + ++ YI Sbjct: 144 EEFTNPAGSITRRYPDRLIINVTNECAMYCRHCQRRRNIGTND--LHTSREVLQESIDYI 201 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 ++ +I +V+ TGGD L LS+ L +L L I V +R SR + PQRI +LI Sbjct: 202 RDNPEIRDVLITGGDALTLSNSMLDWLLGELHAIPSVDYIRLGSRTLVTMPQRITDKLIN 261 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 LK+ P++I H NHP E +EE+ AA RL+NAGI L +Q+VLL GIN++ ++ L Sbjct: 262 ILKKY-PPIFINTHFNHPMEITEESKAACDRLSNAGIPLGNQAVLLNGINNNKFVMRLLN 320 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318 ++ R++PYY+ H GTSHF ++++G +I+ L+ SG+ P YI++ PGG G Sbjct: 321 HELLKCRVRPYYIFHAKHVIGTSHFNTSVDDGIEIMEYLRGYTSGMAIPTYIINAPGGKG 380 Query: 319 KVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 K I + G+ S I V DYP Sbjct: 381 KTPILPQYLISRGSHSIKIRTWDGEVIDYP 410 >gi|239827150|ref|YP_002949774.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70] gi|239807443|gb|ACS24508.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70] Length = 379 Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust. Identities = 115/308 (37%), Positives = 173/308 (56%), Gaps = 10/308 (3%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 I KE+ +++KEI+N + + NLIN +PNDPI + IP + ELN Sbjct: 17 IPKEEREKLKEITNKFVFRVNDYYLNLINWDDPNDPIRKLVIPNEGELNEYGSWDASDEA 76 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 N P G H+Y LL + VC YCRFCFR+ + + +S D + YI Sbjct: 77 ANYVVP--GCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRNDVKEAMS--DVTPGIEYIA 132 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197 + +I V+ TGGD LIL+ K+++ +++ LR I HV+I+RF S++P+ +P RI + EL+ Sbjct: 133 QTPEINNVLLTGGDSLILATKKIRYIVERLRAIDHVKIIRFGSKLPVFNPMRIYEDQELL 192 Query: 198 QCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 ++ P +Y+ H NHP E +EEA A L +AG+I+++Q+ +LKGINDDPE+L Sbjct: 193 DLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVVNQTPILKGINDDPEVL 252 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 A L+ + PYY AG S F LT+EE KIV K + SGL + ++ + Sbjct: 253 AELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEEVYKIVEQAKARTSGLGKRVRLV-MS 311 Query: 315 GGYGKVKI 322 GK++I Sbjct: 312 HSSGKIEI 319 >gi|302386645|ref|YP_003822467.1| lysine 2,3-aminomutase YodO family protein [Clostridium saccharolyticum WM1] gi|302197273|gb|ADL04844.1| lysine 2,3-aminomutase YodO family protein [Clostridium saccharolyticum WM1] Length = 419 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 110/306 (35%), Positives = 178/306 (58%), Gaps = 3/306 (0%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 IK++ Y A++P +L +PH+ DPI IP +EL P DP+G+ +P Sbjct: 90 IKKVEKKYRWAVSPYYLSLADPHDNYDPIRLLSIPTHKELED-PCLDLDPMGEEYTNPAG 148 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 I RYPDR+++ + + C +YCR C RR +G ++ S + ++ YI+E +I +V Sbjct: 149 CITRRYPDRLIINVTNECAMYCRHCQRRRNIG-EEDVHRSREMILESIEYIRENEEIRDV 207 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + TGGD L LS + L+ ++K L+ I H+ +R +R + PQRI +L L++ P+ Sbjct: 208 LITGGDALCLSDEDLEWMIKQLKEISHIDYIRLGTRSLVTMPQRITDQLCSMLRKY-HPI 266 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 YI H NHP E ++ + AA +LA++GI+L +Q+VLL GIN++ I+ L ++ R++ Sbjct: 267 YINTHFNHPIEITKASKAACEKLADSGIVLGNQAVLLNGINNNKYIMRVLNHELLKCRVR 326 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327 PYY+ H GT+HF +IE+G +I+ L+ SG+ P +I++ P G GK I + I Sbjct: 327 PYYIFHAKHVQGTAHFNTSIEDGIEIMEYLRGYTSGMAIPTFIVNAPKGQGKTPIFPNYI 386 Query: 328 KKVGNG 333 G G Sbjct: 387 VSRGPG 392 >gi|312110886|ref|YP_003989202.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. Y4.1MC1] gi|311215987|gb|ADP74591.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. Y4.1MC1] Length = 378 Score = 198 bits (504), Expect = 8e-49, Method: Compositional matrix adjust. Identities = 113/308 (36%), Positives = 176/308 (57%), Gaps = 10/308 (3%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 I KE+ +++K+I+N Y + NLIN +PNDPI + IP + ELN D Sbjct: 16 IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPNEGELNEYGSW--DASD 73 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + + + G H+Y LL + VC YCRFCFR+ + S +S D + YI Sbjct: 74 EEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVKEAMS--DVTPGIEYIA 131 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197 + +I V+ TGGD LIL+ K+++++++ LR I HV+I+RF S++P+ +P RI + EL+ Sbjct: 132 QTPEINNVLLTGGDSLILATKKIRQIVERLRAIDHVKIIRFGSKLPVFNPMRIYEDQELL 191 Query: 198 QCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 ++ P +Y+ H NHP E +EEA A L +AG+I+++Q+ +LKGINDDPE+L Sbjct: 192 DLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVVNQTPILKGINDDPEVL 251 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 A L+ + PYY AG S F LT+E+ +IV K + SGL + ++ + Sbjct: 252 AELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEKVYQIVEQAKARTSGLGKRVRLV-MS 310 Query: 315 GGYGKVKI 322 GK++I Sbjct: 311 HSSGKIEI 318 >gi|325294734|ref|YP_004281248.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065182|gb|ADY73189.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 351 Score = 197 bits (502), Expect = 1e-48, Method: Compositional matrix adjust. Identities = 112/312 (35%), Positives = 174/312 (55%), Gaps = 6/312 (1%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN--ILPEEREDPIGD 80 E+ + K++++ Y TP +L + I R P E++ I + EDP+ + Sbjct: 27 EEKESFKKVTSIYPFLSTPYYLSL---AVKSCAIKRMIFPNIMEISEAIQSKGEEDPLSE 83 Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 + HRYPDR+L+ + CP CRFC R+ +K +S + E AL YI++ Sbjct: 84 ERDKKTLHLTHRYPDRVLVVTTNFCPTLCRFCMRKRN-WKKKTFFISDTEIENALNYIRK 142 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 I +V+ +GGDPL L +RL+K+L L+ I HV+++R +R P+ P R+ + + + Sbjct: 143 NENIRDVLISGGDPLFLPIERLKKLLFGLKAIDHVEVVRVGTRAPVTLPHRLLDDDLLEV 202 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 E + V++ H NHP E +E + A+ L AGI + +Q+VLLKGIND +IL L R Sbjct: 203 LEKAEKVWVNTHFNHPDEITELSKEAVKNLLKAGIPVNNQTVLLKGINDSADILEKLFRN 262 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 +++++PYYL H D G HF +I +G KI+ L ++IS P+Y +D PGG GKV Sbjct: 263 LQKIKVRPYYLFHCDPVKGVMHFSTSITKGIKILEKLFKRISPFAIPYYAVDGPGGKGKV 322 Query: 321 KIDTHNIKKVGN 332 +I KK GN Sbjct: 323 QILPDRYKKEGN 334 >gi|117924254|ref|YP_864871.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1] gi|117608010|gb|ABK43465.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1] Length = 305 Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust. Identities = 105/291 (36%), Positives = 156/291 (53%), Gaps = 9/291 (3%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 + + LTP +A+ + DPI RQF P EEL P DP+ + SP+ G+VH+Y Sbjct: 18 FPMLLTPTMADCMRQPQEQDPIYRQFWPSAEELQNPPHYTTDPLQEAASSPMPGLVHKYQ 77 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTG 151 R LL L CPV+CR+CFRR G + S D +A + +Q + E+I +G Sbjct: 78 GRALLHLTDACPVHCRYCFRRH------GAITSPMDPQAEQQLVDHLAQDHTLQEIILSG 131 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 GDPL+L+ + + L + H+Q +R HSRVP+ DP R+ +++ L+ K V + I Sbjct: 132 GDPLMLNAPKWHWWMTQLAQLPHLQRIRIHSRVPVADPSRLTIPMLETLQNTAKSVVLVI 191 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271 H NH E + + A+ AG ++L+QSVLL G+ND EILA L V L + PYYL Sbjct: 192 HCNHAQELTPASEVALQACRQAGFLVLNQSVLLAGVNDSAEILAKLNLALVGLGVLPYYL 251 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 H D G +HF ++ + +I+ L + + G P + + P GK I Sbjct: 252 HLLDTVQGAAHFEVSPQRAMEIMRQLHQCLPGYALPKLVRERPELPGKEPI 302 >gi|220934405|ref|YP_002513304.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7] gi|219995715|gb|ACL72317.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7] Length = 348 Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 103/269 (38%), Positives = 152/269 (56%), Gaps = 2/269 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P +PNDP+ RQ +P E +P EDP+GD G++H+Y R+LL C Sbjct: 73 MRPGDPNDPLLRQVLPLDAEYRDVPGFVEDPVGDGAAMVAPGLLHKYRGRVLLVTTGACA 132 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V+CR+CFRR + + + +AAL YI I EVI +GGDPL LS +RL + Sbjct: 133 VHCRYCFRRHFPYGEANP--ARGEWQAALDYIAGDDSIHEVILSGGDPLSLSDERLSGLA 190 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 L I HV+ LR HSR P++ P+R++ +L+ L+ + IHANH E A Sbjct: 191 GALGEIPHVRRLRVHSRQPVILPERVDEDLLAWLRPGRFQTVLVIHANHAREIHWPVREA 250 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 ++RLA AG+ LL+QSVLL+G+NDD + LA+L T + PYYLH D G SHF++ Sbjct: 251 LARLARAGVSLLNQSVLLRGVNDDVDTLADLSETLSATGVMPYYLHQLDPVRGASHFQVD 310 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315 + ++ L+ ++ G P + ++PG Sbjct: 311 DDRALRLHHGLRARLPGYLVPRLVREIPG 339 >gi|124431233|gb|ABN11266.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis] Length = 223 Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust. Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 HRYPDR+LL + + CP+YCR C R+ VG T+ + + YI+ Q+ +V+ Sbjct: 1 THRYPDRVLLLVSNTCPMYCRHCTRKRRVGDND-TIPNKSAILQGIDYIRNTPQVRDVLL 59 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDP +LS L +L LR I HV+I+R +R P+V P RI PEL LK+ KPV++ Sbjct: 60 SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 H NHP E ++ A A+ LA+AGI L +Q+VLL GIND P I+ L+ R++PY Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 YL+ DL+ G SHFR + +G +I+ SL SG C P Y++D P Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223 >gi|124431231|gb|ABN11265.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis] Length = 223 Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust. Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 HRYPDR+LL + + CP+YCR C + VG K T+ + + YI+ Q+ +V+ Sbjct: 1 THRYPDRVLLLVSNTCPMYCRHCTSKRCVG-DKDTIPNKSAILQGIDYIRNTPQVRDVLL 59 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDP +LS L +L LR I HV+I+R +R P+V P RI PEL LK+ KPV++ Sbjct: 60 SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 H NHP E ++ A A+ LA+AGI L +Q+VLL GIND P I+ L+ R++PY Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 YL+ DL+ G SHFR + +G +I+ SL SG C P Y++D P Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223 >gi|298528659|ref|ZP_07016063.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512311|gb|EFI36213.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 357 Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 105/283 (37%), Positives = 163/283 (57%), Gaps = 14/283 (4%) Query: 38 ALTPVIANLINPHNPNDPIARQFIPQKEE-------LNILPEEREDPIGDNNHSPLKGIV 90 TP A+L++P +P PI RQ +P +E + L + +G+ I Sbjct: 40 GTTPYFASLMDPQDPACPIRRQVVPSLKEKENKYGIQDYLIHKENRAVGEKRPD---CIA 96 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 +Y DRI + VC YCR CFR+E+V Q G L D + L +I+E ++ +V+ T Sbjct: 97 RQYQDRIAFTVTDVCANYCRHCFRKELVVDQ-GLSLRF-DVDEGLGWIREHPEVRDVLIT 154 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYI 209 GGDP ILS ++L +++ LR I HVQ++RF +R PIV P RIN EL + L + + PV+I Sbjct: 155 GGDPFILSDEKLGRIITELRRIPHVQMIRFGTRTPIVLPSRINKELCEILGDFHRVPVWI 214 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 NH E +EE + L G+ + +Q+VLLKGINDDP+ L + + +RI+PY Sbjct: 215 NTQCNHAREITEETARGVYDLMRCGVNVGNQAVLLKGINDDPQSFRELHQKLLTVRIRPY 274 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKISGLCQPFYIL 311 Y+ + + A G HFR +E+G +++ +++ +GLCQP Y++ Sbjct: 275 YVFYCEPAPGIDHFRTPVEKGAELIRDAIRGHTTGLCQPMYVI 317 >gi|189500360|ref|YP_001959830.1| lysine 2,3-aminomutase YodO family protein [Chlorobium phaeobacteroides BS1] gi|189495801|gb|ACE04349.1| lysine 2,3-aminomutase YodO family protein [Chlorobium phaeobacteroides BS1] Length = 358 Score = 193 bits (490), Expect = 3e-47, Method: Compositional matrix adjust. Identities = 113/317 (35%), Positives = 175/317 (55%), Gaps = 24/317 (7%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + S Q L + E+ I+ + + + TP A+L++ +PN PI RQ IP +E Sbjct: 13 VDSVQKLEQYINVTDEERRTIESLDTKWGV--TPYFASLMDKDDPNCPIRRQVIPSMQE- 69 Query: 68 NILPEEREDPIGDNNHSPLK-----------GIVHRYPDRILLKLLHVCPVYCRFCFRRE 116 + + G +N+ K I +Y DRI ++ C +YCR CFR+E Sbjct: 70 ------KVNEFGMDNYLLWKENRSTEEVRPDSIARQYHDRIAFTVIETCAIYCRHCFRKE 123 Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 +V Q + D + LA+I E +I +V+ TGGDPL+LS +L +++ LR I HV+ Sbjct: 124 LVVDQDLKL--RMDVDEGLAWIAEHPEIRDVLITGGDPLLLSDDKLARLIGRLREIPHVE 181 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI 235 ++R SR+PIV PQRI L + + K PV+I NHP E +EE A+ L + GI Sbjct: 182 MIRIGSRLPIVLPQRITEGLKKAIGGFHKVPVWINTQCNHPKEITEETAKAVYELMSCGI 241 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 + +Q+VLLKGINDD E L + + +RI+PYY+ + + A G HFR +E+G +++ Sbjct: 242 NVGNQAVLLKGINDDVETFRELHQMLLRIRIRPYYVFYCEPAPGIDHFRTPVEKGAELIR 301 Query: 296 -SLKEKISGLCQPFYIL 311 +L+ +GL QP Y+L Sbjct: 302 DALRGHTTGLAQPMYVL 318 >gi|45657183|ref|YP_001269.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600421|gb|AAS69906.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 429 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 168/290 (57%), Gaps = 4/290 (1%) Query: 36 SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95 +++ TP +L +P +PN PI + +P+++E PEE DP+ + SP+KG+ H YPD Sbjct: 78 NVSATPYYISLADPEDPNCPIRKMILPREDECIFSPEESPDPLHEERLSPVKGLTHMYPD 137 Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R+LL H C VYCR C R V K +L ++D E YI+ +I +V+ +GGDPL Sbjct: 138 RVLLFTNHECSVYCRHCMRGRKVSDSKERML-TEDLEICFDYIKSHPEITDVVLSGGDPL 196 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIH 212 LS ++ +L+ L I+HV+I R +R P+ P R+ +L ++ ++ Sbjct: 197 NLSDSKIDWILERLEKIEHVKICRLGTRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQ 256 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 NH E + EA AI +L AG+ + +Q VLLK +ND + + L + +ELR++ YY++ Sbjct: 257 FNHSKECTPEAKEAILKLLKAGVNVGNQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMY 316 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 P+L G+ FR + +G +I+ ++ KI G+ P ++ DLPGG GK+ + Sbjct: 317 DPELIPGSRGFRTPLAKGIEIIEFMRGKIGGMGIPQFVNDLPGGGGKITL 366 >gi|24215400|ref|NP_712881.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str. 56601] gi|24196517|gb|AAN49899.1|AE011436_14 L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str. 56601] Length = 416 Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust. Identities = 103/290 (35%), Positives = 168/290 (57%), Gaps = 4/290 (1%) Query: 36 SIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD 95 +++ TP +L +P +PN PI + +P+++E PEE DP+ + SP+KG+ H YPD Sbjct: 65 NVSATPYYISLADPEDPNCPIRKMILPREDECIFSPEESPDPLHEERLSPVKGLTHMYPD 124 Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R+LL H C VYCR C R V K +L ++D E YI+ +I +V+ +GGDPL Sbjct: 125 RVLLFTNHECSVYCRHCMRGRKVSDSKERML-TEDLEICFDYIKSHPEITDVVLSGGDPL 183 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIH 212 LS ++ +L+ L I+HV+I R +R P+ P R+ +L ++ ++ Sbjct: 184 NLSDSKIDWILERLEKIEHVKICRLGTRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQ 243 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 NH E + EA AI +L AG+ + +Q VLLK +ND + + L + +ELR++ YY++ Sbjct: 244 FNHSKECTPEAKEAILKLLKAGVNVGNQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMY 303 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 P+L G+ FR + +G +I+ ++ KI G+ P ++ DLPGG GK+ + Sbjct: 304 DPELIPGSRGFRTPLAKGIEIIEFMRGKIGGMGIPQFVNDLPGGGGKITL 353 >gi|326560914|gb|EGE11279.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 7169] gi|326563850|gb|EGE14101.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 46P47B1] gi|326566861|gb|EGE17000.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 103P14B1] gi|326571276|gb|EGE21298.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC1] gi|326571582|gb|EGE21597.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC7] gi|326576776|gb|EGE26683.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 101P30B1] Length = 356 Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 98/271 (36%), Positives = 154/271 (56%), Gaps = 2/271 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E + DP+ +NNH+P+KG++H+Y R+LL + C V+CR+C Sbjct: 69 HDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHKYQSRVLLTVTGACAVHCRYC 128 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FR+ S+ + + + YI + +++ EVI +GGDPL L++KRL+ L + I Sbjct: 129 FRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGGDPLSLNNKRLKLWLDKITAI 186 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ +R H+R+P+V P R++ ELI ++ K + I +H NHP E ++ IA +L + Sbjct: 187 GHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLHINHPNEIDDQLIAKTKQLKD 246 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AG LL+QSVLL INDD + L+ L + I PYYLH D G +HF + I + Sbjct: 247 AGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLHILDKVQGAAHFDIDIHDAVG 306 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + L E + G P + + P K ID Sbjct: 307 LYWQLLEALPGYLVPKLVQERPNHPFKTPID 337 >gi|317129675|ref|YP_004095957.1| lysine 2,3-aminomutase YodO family protein [Bacillus cellulosilyticus DSM 2522] gi|315474623|gb|ADU31226.1| lysine 2,3-aminomutase YodO family protein [Bacillus cellulosilyticus DSM 2522] Length = 388 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 115/306 (37%), Positives = 169/306 (55%), Gaps = 18/306 (5%) Query: 11 AQDLYNANLIKKEQIDE-----IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 AQ Y N+ K QI E +K+I+ + + NLI+ +NPNDPI + IP + Sbjct: 2 AQPKYIMNIDKITQIPEEERAKLKKITEKFVFRVNDYYLNLIDWNNPNDPIKKLIIPNEG 61 Query: 66 ELNILPEE--REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 EL EE R D ++ + G H+Y LL + VC YCR+CFR+ + + Sbjct: 62 EL----EEYGRWDASDEDTNYAAPGCQHKYGTTALLIVSEVCGAYCRYCFRKRLFRNDIK 117 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 ++ D + + YI+ QI V+ TGGD LIL+ K+L+ +++ LR I HV+I+R S+ Sbjct: 118 EAMA--DVQPGIEYIKNNPQINNVLLTGGDSLILATKKLRLIIEQLREIPHVKIIRLGSK 175 Query: 184 VPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 +P+ +P RI + EL+ +KE P +Y+ H NHP E +EEA L NAG I++ Sbjct: 176 MPVFNPMRIYEDQELLDLIKEYSTPEQRIYVMAHINHPVEITEEAKKGFDALHNAGAIVV 235 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+ +LKGINDDPE+LA L+ + PYY AG + F LT+EE V + K Sbjct: 236 NQTPVLKGINDDPEVLAELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEAYNAVEAAK 295 Query: 299 EKISGL 304 K SGL Sbjct: 296 AKTSGL 301 >gi|326566522|gb|EGE16668.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 12P80B1] gi|326569812|gb|EGE19862.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC8] Length = 345 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 98/271 (36%), Positives = 154/271 (56%), Gaps = 2/271 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E + DP+ +NNH+P+KG++H+Y R+LL + C V+CR+C Sbjct: 69 HDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHKYQSRVLLTVTGACAVHCRYC 128 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FR+ S+ + + + YI + +++ EVI +GGDPL L++KRL+ L + I Sbjct: 129 FRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGGDPLSLNNKRLKLWLDKITAI 186 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ +R H+R+P+V P R++ ELI ++ K + I +H NHP E ++ IA +L + Sbjct: 187 GHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLHINHPNEIDDQLIAKTKQLKD 246 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AG LL+QSVLL INDD + L+ L + I PYYLH D G +HF + I + Sbjct: 247 AGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLHILDKVQGAAHFDIDIHDAVG 306 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + L E + G P + + P K ID Sbjct: 307 LYWQLLEALPGYLVPKLVQERPNHPFKTPID 337 >gi|284008180|emb|CBA74439.1| radical SAM superfamily protein [Arsenophonus nasoniae] Length = 340 Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 108/274 (39%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + NDP+ RQ I K E N+ P DP+ ++ HSP+ G++H+Y DR+LL + C V CR Sbjct: 67 DANDPLLRQVITLKSEFNLTPTFSADPLNEH-HSPIPGLLHKYQDRVLLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + ++ + AL YIQ +++ EVIF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYEENKG---NKQNWQTALNYIQRHTELNEVIFSGGDPLMAKDHELDWLMSRL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI L Q + V + H NH E E A+ + Sbjct: 183 ETIPHIKRLRIHSRLPVVIPARITTTLCQRFNISRLQVIMVTHINHANEIDNEFSHAMEQ 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+QSVLL+GIND+ + LA L E I PYYLH D G +HF +T EE Sbjct: 243 LKQVNVTLLNQSVLLRGINDNADSLAKLSNKLFENGILPYYLHLLDKVQGAAHFMVTDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + I+ L +ISG P ++ G K ID Sbjct: 303 ARIIMKELLTRISGYLVPRLTREIGGKLSKTPID 336 >gi|15615505|ref|NP_243809.1| hypothetical protein BH2943 [Bacillus halodurans C-125] gi|10175565|dbj|BAB06662.1| BH2943 [Bacillus halodurans C-125] Length = 393 Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 107/290 (36%), Positives = 168/290 (57%), Gaps = 9/290 (3%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 I KE+ +++K+I++ + + +LI+ ++PNDPI + IP + EL+ R D Sbjct: 16 IPKEEREKLKQITDKFVFRVNDYYLSLIDWNDPNDPIRKLVIPNEGELS--EYGRWDASD 73 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 ++ + + G H+Y LL VC YCR+CFR+ + + +S D + L YI Sbjct: 74 EDTNYVVPGCQHKYETTALLICSEVCGAYCRYCFRKRLFRNDVKEAMS--DVDPGLDYIA 131 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197 + QI V+ TGGDPLIL+ K+L+ +++ LR I HV+I+R S++P+ +P RI + +L+ Sbjct: 132 QTPQINNVLLTGGDPLILATKKLRYIIERLRAIDHVKIIRIGSKLPVFNPMRITEDEQLL 191 Query: 198 QCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 + ++E P +YI H NHP E + EA A L +AG I+++Q+ +LKGINDDP++L Sbjct: 192 ELIREYSTPDHRIYIMAHINHPVEITNEARQAFQALHDAGAIVVNQTPVLKGINDDPDVL 251 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 A L+ + PYY AG + F LT+EE IV K K SGL Sbjct: 252 AELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEVYNIVEKAKAKTSGL 301 >gi|326575138|gb|EGE25066.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis CO72] gi|326577548|gb|EGE27425.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis O35E] Length = 356 Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust. Identities = 97/271 (35%), Positives = 154/271 (56%), Gaps = 2/271 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E + DP+ +NNH+P+KG++H+Y R+LL + C V+CR+C Sbjct: 69 HDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHKYQSRVLLTVTGACAVHCRYC 128 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FR+ S+ + + + YI + +++ EVI +GGDPL L++KRL+ L + I Sbjct: 129 FRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGGDPLSLNNKRLKLWLDKITAI 186 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ +R H+R+P+V P R++ ELI ++ K + I +H NHP E ++ IA +L + Sbjct: 187 GHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLHINHPNEIDDQLIAKTKQLKD 246 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AG LL+QSVLL INDD + L+ L + I PYYLH D G +HF + I + Sbjct: 247 AGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLHILDKVQGAAHFDIDIHDAVG 306 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + L E + G P + + P K +D Sbjct: 307 LYWQLLEALPGYLVPKLVQERPNHPFKTPLD 337 >gi|296112655|ref|YP_003626593.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4] gi|295920350|gb|ADG60701.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4] Length = 356 Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust. Identities = 97/271 (35%), Positives = 154/271 (56%), Gaps = 2/271 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E + DP+ +NNH+P+KG++H+Y R+LL + C V+CR+C Sbjct: 69 HDPLLRQVLPDGRERMAVDGYSTDPLDENNHNPIKGLLHKYQSRVLLTVTGACAVHCRYC 128 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FR+ S+ + + + YI + +++ EVI +GGDPL L++KRL+ L + I Sbjct: 129 FRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGGDPLSLNNKRLKLWLDKITAI 186 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ +R H+R+P+V P R++ ELI ++ K + I +H NHP E ++ IA +L + Sbjct: 187 GHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLHINHPNEIDDQLIAKTKQLKD 246 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AG LL+QSVLL INDD + L+ L + I PYYLH D G +HF + I + Sbjct: 247 AGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLHILDKVQGAAHFDIDIHDAVG 306 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + L E + G P + + P K +D Sbjct: 307 LYWQLLEALPGYLVPKLVQERPNHPFKTPLD 337 >gi|92114650|ref|YP_574578.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043] gi|91797740|gb|ABE59879.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043] Length = 356 Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 98/276 (35%), Positives = 150/276 (54%), Gaps = 2/276 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I P +P+DP+ RQ +P E + DP+ + H P G++H+Y +R+LL C Sbjct: 82 IRPGDPDDPLLRQVLPLDRESEPVAGFVGDPLEEAEHRPRPGLIHKYRNRVLLIASPACA 141 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 + CR+CFRR ++ S E L Y+++ + I E IF+GGDPL +RL + Sbjct: 142 INCRYCFRRHFPYAENSP--SRGQWETTLDYLRQDTSINEAIFSGGDPLASPDRRLAWLA 199 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + L I H++ LR H+R+P+V P R++ L+ L + +H NHP E A Sbjct: 200 ERLADIPHLKRLRLHTRLPVVIPDRVDSPLLDWLAATRLQTVMVVHINHPNEIDAGVADA 259 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + RL AG+ LL+QSVLL+G+NDD E LA L E+ I PYYLH D G +HF + Sbjct: 260 MQRLRGAGVTLLNQSVLLRGVNDDVETLARLSERLFEVGILPYYLHVLDPVEGAAHFDVP 319 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 E +V +L+ +++G P + ++PG K + Sbjct: 320 DAEAVSLVETLRTQLAGFLMPRLVREVPGEASKTPL 355 >gi|289207649|ref|YP_003459715.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp. K90mix] gi|288943280|gb|ADC70979.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp. K90mix] Length = 348 Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust. Identities = 97/245 (39%), Positives = 145/245 (59%), Gaps = 2/245 (0%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 DP+GD++ G+VH+Y R+LL C V+CR+CFRRE ++ S D A+ Sbjct: 100 DPVGDHDALAAPGLVHKYHGRVLLLTTGACAVHCRYCFRREFPYAEHNA--SQDDWAPAI 157 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195 AYI + I EVI +GGDPL LS +RL +++ L I H++ LR H+R+P+V P+R++ + Sbjct: 158 AYIHADTSIREVILSGGDPLSLSDRRLADLVRRLEAIPHLERLRIHTRLPVVLPERVDEQ 217 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 L+ L + + +HANHP EF++ A A++RL GI LL+Q+VLL GINDDP+ L Sbjct: 218 LLSWLGKGRLHHVLVLHANHPREFADPAAPALARLQARGITLLNQAVLLAGINDDPDTLC 277 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 L + PYYLH D GT+HF +T ++ +L ++ G P + ++PG Sbjct: 278 ELQEAGFRHGVLPYYLHLLDRTRGTAHFEVTEHRALELHQALHARLPGYLVPRLVREIPG 337 Query: 316 GYGKV 320 GK Sbjct: 338 EPGKT 342 >gi|149179351|ref|ZP_01857910.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797] gi|148841823|gb|EDL56227.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797] Length = 335 Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust. Identities = 106/288 (36%), Positives = 159/288 (55%), Gaps = 6/288 (2%) Query: 32 SNHYSIALTPV-IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 S H + PV N I P + +DP+ +Q +P + E +P D +GD N GI+ Sbjct: 41 SAHLFPLMVPVSYLNRIEPGSLDDPLLKQILPVELENADIPGFETDAVGDLNVRATPGIL 100 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 +Y R LL + C ++CR+CFRR + L+ D E +Q S + E+I + Sbjct: 101 QKYHGRALLMVSGACAIHCRYCFRRHYPYGDEPRTLA--DWEPVWQSLQADSTVQEIILS 158 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP---ELIQCLKEAGKPV 207 GGDPL+L+ RL + + + I HV+ LR HSR+P+V P RI+ E++ L E G Sbjct: 159 GGDPLLLTDLRLNDLCERIAAIPHVKRLRIHSRLPVVLPDRIHAGLLEMLHGLTEQGTMP 218 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 ++ IH NHP E + + AI ++ AGI +L+QSVLLKGIND E L L V L + Sbjct: 219 WMVIHINHPNEIAPDVELAIKQMLQAGIPVLNQSVLLKGINDTAETLIELSEKLVNLGVI 278 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 PYYLH D G +HF + +G+K++ L+ ++ G P Y+ ++PG Sbjct: 279 PYYLHQLDRVTGAAHFEVPQAQGRKLIEELRTRLPGYAVPQYVREIPG 326 >gi|284162142|ref|YP_003400765.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus DSM 5631] gi|284012139|gb|ADB58092.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus DSM 5631] Length = 368 Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust. Identities = 106/292 (36%), Positives = 172/292 (58%), Gaps = 10/292 (3%) Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85 ++++++ + + +T +LI+ ++ NDPI R IP +EL+ L E D G++ ++ Sbjct: 29 EKLRKVVEIHPMNVTRYYLSLIDWNDSNDPIKRMAIPSPDELSCL-EGDYDTSGEHENTK 87 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 ++G+ H+Y + L+ + C VYCR+CFR+ MVG + V+ D A+ YI+E ++ Sbjct: 88 MRGLQHKYSETALVLATNRCAVYCRYCFRKRMVGLTRDEVIRRLDR--AVKYIEEHEEVT 145 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN----PELIQCLK 201 V+ +GGDP +L +K +++ L L I H+ +RF SRVP+ P R+N PE++ Sbjct: 146 NVLISGGDPFVLDNKIIKRFLNKLVEIPHLDFIRFGSRVPVTFPMRLNDDDLPEILGEFA 205 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 E K +Y+ H NHP EF+EE+ AI RL + GI++ +Q+VLLKG+NDDP LA L R Sbjct: 206 EL-KRIYVVTHYNHPKEFTEESTGAIKRLLDNGIVVSNQAVLLKGVNDDPYTLAELHRLL 264 Query: 262 VELRIKPYYLHHPD-LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YIL 311 V I PYY+ + F++ ++EG KIV K + G + F YI+ Sbjct: 265 VRYGIVPYYVFQCRPVKRVKGIFQVPLKEGYKIVERAKAMLDGHSKRFRYIM 316 >gi|126666938|ref|ZP_01737914.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17] gi|126628654|gb|EAZ99275.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17] Length = 350 Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 148/273 (54%), Gaps = 2/273 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ +P +E L DP+ + + G++ +Y R LL + C + CR Sbjct: 78 NPNDPLLRQVLPLVDETRTLAGFVADPLAEADAMATTGLIRKYKSRALLMVTGQCAINCR 137 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ L +D + L + +I EVIF+GGDPL + K L + K L Sbjct: 138 YCFRRHFPYDEQR--LKPQDRQTVLDTLANSPEINEVIFSGGDPLAANDKLLAQWAKALE 195 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR H+R+P+V PQR+ L+Q ++ V + +H NHP E + + A+ RL Sbjct: 196 QIPHLRRLRIHTRLPVVIPQRVCDALLQWIRATRLRVVVVLHINHPAEIDQATVQALQRL 255 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+QSV+L+G+ND ++L L + + PYYLH D AG HF + E Sbjct: 256 TEAGVTLLNQSVILRGVNDSVDVLEQLSEQLFDAGVLPYYLHAFDPVAGAHHFAVPDSEA 315 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + + L E++ G P + +LPG K +D Sbjct: 316 KALTRELLERLPGFLVPRLVRELPGAGSKTPLD 348 >gi|332140129|ref|YP_004425867.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550151|gb|AEA96869.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 341 Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust. Identities = 111/314 (35%), Positives = 165/314 (52%), Gaps = 8/314 (2%) Query: 17 ANLIKKEQIDEIKEISNHYSIALTPV-----IANLINPHNPNDPIARQFIPQKEELNILP 71 A L++ +DE K + + L P+ A+L+ NPNDP+ Q +P +E P Sbjct: 28 AKLLQHLGLDEEKYAQHIKARRLFPMRVPRHFADLMEKGNPNDPLFLQVMPLSDEFLTSP 87 Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 EDP+ +++ + KGI+H+Y R+LL + C V CR+CFRR +S Sbjct: 88 GYSEDPLEEHD-TAGKGILHKYDSRVLLMVRTGCAVNCRYCFRRHF--PYADNAVSKHQW 144 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 E L YIQ I EVIF+GGDPL+ L + + I HV+ LR H+R+P+V P+R Sbjct: 145 EEVLQYIQAHDNINEVIFSGGDPLMAKDDHLAWLANEIASINHVKRLRIHTRLPVVLPER 204 Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 IN + + +HANH E SE + + L G+ LL+QSVLLKG+ND Sbjct: 205 INNAFVNWFTALPIQKVLVLHANHANEMSEALKSRLITLREKGVTLLNQSVLLKGVNDSG 264 Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 E +++L E + PYYLH D G SHF ++ +EG+ I+ +++ G P + Sbjct: 265 EAISDLSEALFEASVLPYYLHVLDKVQGASHFYVSDDEGRHIMEEAIKRLPGFLVPKLVR 324 Query: 312 DLPGGYGKVKIDTH 325 ++ G GK ID H Sbjct: 325 EIGGQPGKTPIDLH 338 >gi|116207106|ref|XP_001229362.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51] gi|88183443|gb|EAQ90911.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51] Length = 498 Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 109/305 (35%), Positives = 165/305 (54%), Gaps = 23/305 (7%) Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91 ++ +TP I + IN HNP +DPIARQF+P K + +P+ + D + + SP+KG+VH Sbjct: 148 AVRMTPYILSRINWHNPRHDPIARQFLPLKSRM--IPDHPKLTLDSLHEEADSPVKGLVH 205 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIW 145 RYPD+ L VCP YC FC R VG+ TV + + + ALAYI + Q+ Sbjct: 206 RYPDKALFLPTSVCPTYCTFCTRSYAVGADTATVSKASLKPGRRRWDEALAYIASQPQLQ 265 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELI 197 +++ +GGD L ++L+++ + L I H++ RF S+ V P R+ L+ Sbjct: 266 DIVVSGGDAYYLQAEQLEQLGERLIAIPHIRRFRFASKGLAVAPGRVLDRSGDGWTDALV 325 Query: 198 QC---LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 + + AGK V H NHP E S AA RL G+++ +QSVLL+G+NDD E + Sbjct: 326 RVSDRARRAGKAVAWHTHFNHPSEISWVTEAAAQRLFEEGVMVRNQSVLLRGVNDDVETM 385 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 L+R I PYY++ D+ H R + + A L+ I+G P +++DLP Sbjct: 386 GALIRGLANNNIFPYYVYQCDMVKSVEHLRTPLRTILDLEAKLRGSIAGFMMPSFVVDLP 445 Query: 315 GGYGK 319 GG GK Sbjct: 446 GGGGK 450 >gi|15642896|ref|NP_227937.1| hypothetical protein TM0121 [Thermotoga maritima MSB8] gi|4980613|gb|AAD35215.1|AE001698_4 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 368 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 168/291 (57%), Gaps = 13/291 (4%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGD 80 E+ + +K + Y +LI+ +P+DPI + +P+++EL EE D + Sbjct: 21 EERERLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKIIVPEEDEL----EEWGTLDASNE 76 Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 +++ KG+ H+YPD L + VC +CRFCFR+ + + V+ +D L YI+ Sbjct: 77 KSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRT 134 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQ 198 +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R S++P +P RI +P+L++ Sbjct: 135 HKEITNVLLTGGDPLLLSTEKLEKIVSSLREIDHVQIIRIGSKIPAFNPYRIIDDPDLLK 194 Query: 199 CLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 +++ K +Y+ NHP E + EAI A++ L +AG +L +Q+ LL+GINDDPE+L Sbjct: 195 MIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGAVLCNQTPLLRGINDDPEVLG 254 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 L+ + + PYY+ +G F + IEEG +I ISG+ + Sbjct: 255 ELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTKAISNISGVAK 305 >gi|307544317|ref|YP_003896796.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581] gi|307216341|emb|CBV41611.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581] Length = 572 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 2/276 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I P +P+DP+ RQ +P EE + P DP+ + H+P +G++H+Y R+LL C Sbjct: 299 IRPGDPHDPLLRQVLPLDEESHSTPGFVTDPLEEREHTPRRGLIHKYAGRVLLIASPACA 358 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 + CR+CFRR + S L Y++ + I E I +GGDPL + ++L ++ Sbjct: 359 INCRYCFRRHFPYDENAP--SRAQWADTLDYLRGDASIREAILSGGDPLAANDRQLGWLV 416 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + L I H++ LR H+R+P+V P RI+ L+ L + +H NHP E E I A Sbjct: 417 EQLEAIPHLKRLRIHTRLPVVIPDRIDGALLDWLGRTRLQKVVVLHINHPNEIDEAVIDA 476 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 RL +AG+ LL+QSVLL GINDD + L L E + PYYLH D G +HF + Sbjct: 477 CRRLRDAGVTLLNQSVLLAGINDDVDTLTALSERLFEADVLPYYLHVLDPVDGAAHFEID 536 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + + +V +++ ++ G P + ++PG K I Sbjct: 537 DDTARTLVDAMRRELPGFLMPTLVREIPGEASKTPI 572 >gi|89092066|ref|ZP_01165021.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92] gi|89083801|gb|EAR63018.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92] Length = 337 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 106/298 (35%), Positives = 162/298 (54%), Gaps = 6/298 (2%) Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG--DNN 82 +D ++ S+ +S+ + + I P NP DP+ RQ +P +EL + DP+ D N Sbjct: 41 LDGAQKGSDLFSMKVPEPYLSRIEPGNPKDPLLRQVLPLNDELADVSGFVADPLAEMDAN 100 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 HS G++H+Y R+LL L C + CR+CFRR + L S+ + L Y++ Sbjct: 101 HS--DGLIHKYKGRVLLILSGACAINCRYCFRRHF--PYQENRLGSEQWQQVLNYLKSDP 156 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 I EVIF+GGDPL S RL+++++ L I H+ LR HSR+PIV PQR+ L+Q L++ Sbjct: 157 TISEVIFSGGDPLATSDNRLERMIRDLEEIPHLSRLRIHSRLPIVIPQRVTDRLLQILRD 216 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 + + +HANHP E + R+ ++ I +L+Q+VLLKGIND ++L L Sbjct: 217 SRFSTVMVLHANHPNELDGSTAESAKRMKDSHITVLNQAVLLKGINDQVDVLQQLSEKLF 276 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 E I PYYL D G +HF + EE K+ ++ + G P ++PG K Sbjct: 277 EQGILPYYLFTLDPVKGAAHFDIPDEEAVKLHQQMQAVLPGYLVPKLAREIPGKTEKT 334 >gi|254447007|ref|ZP_05060474.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium HTCC5015] gi|198263146|gb|EDY87424.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium HTCC5015] Length = 343 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 104/270 (38%), Positives = 143/270 (52%), Gaps = 2/270 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ Q +PQ E + DP+GD N G++H+Y R+LL C ++CR+C Sbjct: 76 DDPLLLQALPQAVEHAEVAGFSADPVGDLNAQKTTGLLHKYHGRVLLVATGACAIHCRYC 135 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRRE Q S + +L YI S I EVI +GGDPL LS KRL K++ + I Sbjct: 136 FRREYPYEQASATQS--QWQESLDYIAADSSIHEVILSGGDPLTLSDKRLHKLIDRIETI 193 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 HVQ LR HSR+PIV P R+ L Q L ++ + +HANH E A+ L Sbjct: 194 SHVQRLRIHSRLPIVLPSRVTETLCQRLAQSRLRCIMVVHANHAQELDHTTAKALQDLRR 253 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AG+ L+Q+VLL GIND E LA L E PYYLH D G +HF + + Sbjct: 254 AGVDCLNQAVLLAGINDSVEALAQLSERLFEQGALPYYLHSLDRVHGAAHFEVDEARAKH 313 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKI 322 +VA L+E++SG P + ++ G K + Sbjct: 314 LVAQLRERLSGYLVPTLVREIEGESSKTPL 343 >gi|148269938|ref|YP_001244398.1| lysine 2,3-aminomutase YodO family protein [Thermotoga petrophila RKU-1] gi|147735482|gb|ABQ46822.1| L-lysine 2,3-aminomutase [Thermotoga petrophila RKU-1] Length = 365 Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 103/291 (35%), Positives = 167/291 (57%), Gaps = 13/291 (4%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGD 80 E+ + +K I Y +LI+ +P+DPI + +P+++EL EE D + Sbjct: 18 EERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKIVVPEEDEL----EEWGTLDASNE 73 Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 +++ KG+ H+YPD L + VC +CRFCFR+ + + V+ +D L YI+ Sbjct: 74 KSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRS 131 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQ 198 +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R S++P +P RI +PEL++ Sbjct: 132 HKEITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVQIIRIGSKIPAFNPYRIIDDPELLR 191 Query: 199 CLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 +++ K +Y+ NHP E +EEAI A++ L +AG +L +Q+ LL+GIND PE L Sbjct: 192 MIRKYSTKEKKIYVMTQFNHPKELTEEAIEAVNLLKDAGAVLCNQTPLLRGINDSPETLG 251 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 L+ + + PYY+ +G F + IEEG +I ISG+ + Sbjct: 252 ELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTKAISNISGVAK 302 >gi|170288623|ref|YP_001738861.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2] gi|170176126|gb|ACB09178.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2] Length = 365 Score = 187 bits (476), Expect = 1e-45, Method: Compositional matrix adjust. Identities = 102/291 (35%), Positives = 167/291 (57%), Gaps = 13/291 (4%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGD 80 E+ + +K I Y +LI+ +P+DPI + +P+++EL EE D + Sbjct: 18 EERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKIVVPEEDEL----EEWGTLDASNE 73 Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 +++ KG+ H+YPD L + VC +CRFCFR+ + + V+ +D L YI+ Sbjct: 74 KSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRT 131 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQ 198 +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R S++P +P RI +P+L+ Sbjct: 132 HKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIRIGSKIPAFNPYRIIDDPDLLM 191 Query: 199 CLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 +++ K +Y+ NHP E + EAI A++ L +AG +L +Q+ LL+GINDDPE+L Sbjct: 192 MIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGAMLCNQTPLLRGINDDPEVLG 251 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 L+ + + PYY+ +G F + IEEG +I ISG+ + Sbjct: 252 ELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTKAISNISGVAK 302 >gi|329894763|ref|ZP_08270564.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088] gi|328922752|gb|EGG30085.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088] Length = 335 Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 107/313 (34%), Positives = 170/313 (54%), Gaps = 4/313 (1%) Query: 11 AQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69 + +L A + + +D I E + +A P +A + NP DP+ Q + +EE+ Sbjct: 25 SAELLQAVGVPQSSLDTITGETAGFAVLAPRPFVARM-EYGNPKDPLLLQVLALQEEIAP 83 Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 DP+ + +P+ GI+H+Y R+LL C V CR+CFRR +Q +L+ Sbjct: 84 NAVGTTDPLEEQRFTPVPGIIHKYFGRVLLMTAGTCAVNCRYCFRRHNDYAQN--ILTPA 141 Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 AL Y++ + I EVI +GGDPL+ S ++L +++ L I H+Q LR H+R+PIV P Sbjct: 142 RLNEALTYLRSQRDITEVILSGGDPLLTSDRKLSELVAELEAIPHIQRLRIHTRLPIVIP 201 Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 QRI EL Q L ++ V + +H NHP E E A+++L GI LL+Q+VLLK IN+ Sbjct: 202 QRITTELCQRLGQSRFQVTLVVHCNHPKELDVEVGLAMAQLKAQGITLLNQTVLLKNINN 261 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309 L L ++ + PYYLH D G +HF + + +++ +L+ ++ G P Sbjct: 262 CAATLETLSVELFKIGVLPYYLHTLDPVQGAAHFAQPMGDSKQLHQTLQARLPGYLVPKL 321 Query: 310 ILDLPGGYGKVKI 322 + ++PGG K I Sbjct: 322 VSEIPGGASKTLI 334 >gi|297620566|ref|YP_003708703.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044] gi|297375867|gb|ADI37697.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044] Length = 327 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 105/323 (32%), Positives = 172/323 (53%), Gaps = 8/323 (2%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPV-IANLINPHNPNDPIARQF 60 Q++ + T+ + L A+ ++ ++ + + N + P+ +A I N NDPI RQF Sbjct: 12 QIQRQNFTNWEKL--ADFLELDEFHRQEIMKNPRFVLNLPIRLAKKIEKGNLNDPILRQF 69 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E+ DP+GD+ ++H+Y R+LL C ++CR+CFR+ Sbjct: 70 LPMVAEMVETAGFVSDPVGDHACRKASKLLHKYNGRVLLVSTSACAMHCRYCFRQNF--- 126 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + K + L I + I EVI +GGDPL LS++ L +L+ + I H+ LRF Sbjct: 127 --DYEVEDKTFDEELEVISKDETIKEVILSGGDPLSLSNRHLGALLEKISAIPHINRLRF 184 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 HSR PI P+RI+ E ++ + V+ IH NHP E ++ ++ L G+ +L+Q Sbjct: 185 HSRFPIGIPERIDDEFLEAVDRLPHQVWFVIHCNHPRELDKDIFDRLNTLRKLGVNILNQ 244 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+NDD + LA L T + I PYYLH D G SHF ++ EEG +++ L + Sbjct: 245 AVLLRGVNDDADTLAELCETLSDHGIFPYYLHQLDRVQGASHFEVSKEEGLQLIDQLTRR 304 Query: 301 ISGLCQPFYILDLPGGYGKVKID 323 + G P Y+ ++ G K ++ Sbjct: 305 LPGYAVPKYVQEIAGEPSKTPLN 327 >gi|150020902|ref|YP_001306256.1| lysine 2,3-aminomutase YodO family protein [Thermosipho melanesiensis BI429] gi|149793423|gb|ABR30871.1| lysine 2,3-aminomutase YodO family protein [Thermosipho melanesiensis BI429] Length = 370 Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 120/357 (33%), Positives = 190/357 (53%), Gaps = 36/357 (10%) Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE--RED 76 L +KE+ E+K+++ Y +LIN +PNDPI + IPQ EEL EE + D Sbjct: 15 LTEKEK-QELKKVTEKYKFRANDYYLSLINWEDPNDPIRKLIIPQLEEL----EEWGKLD 69 Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 + +++ KG+ H+Y D LL + VC +CRFCFR+ + + V ++D L Sbjct: 70 ASNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINIGEEV--ARDVTEDLE 127 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NP 194 YI++ +I V+ TGGDPL+LS K+L+K++ +R I+HVQI+R S++ +P RI +P Sbjct: 128 YIKKHKEITNVLLTGGDPLLLSTKKLEKIISQIREIEHVQIIRIGSKMVAFNPYRIIEDP 187 Query: 195 ELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 ELI+ +K+ K +YI NHP E +E+AI A++ L AG IL +Q+ L+KG+NDD Sbjct: 188 ELIELIKKYSTNEKKIYIMTQFNHPRELTEQAIIAVNMLQKAGAILANQTPLIKGVNDDW 247 Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 + L L + + + PYY+ AG F + +EEG +I +SGL + Sbjct: 248 KTLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEGYQIFLKAIMNVSGLAKRAR-F 306 Query: 312 DLPGGYGKVKID-------------THNIKKVGN--------GSYCITDHHNIVHDY 347 + GK+++ HN K G +Y D++ +V +Y Sbjct: 307 AMSHETGKIEVSALTKEHIIFRYQRAHNPKNAGKIMVFKRNPNAYWFDDYNELVEEY 363 >gi|257457951|ref|ZP_05623110.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580] gi|257444664|gb|EEV19748.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580] Length = 345 Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust. Identities = 99/317 (31%), Positives = 164/317 (51%), Gaps = 9/317 (2%) Query: 39 LTPVIANLINPHNPNDPIA--RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 ++P LI P A RQ + E + EER DP+G+ + +VH+YP+R Sbjct: 30 VSPAFQALITSAEPAASAALRRQVLSSDSEQLVSEEERGDPLGEARYCVTPYLVHQYPNR 89 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +LL C YCR+CFRRE G LS +Y++ ++ E++ +GGDP+ Sbjct: 90 VLLLSTGRCISYCRYCFRREFTARSSG-FLSEAQIGTVTSYLKTHPEVQEILVSGGDPMS 148 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 ++ +L+ LR + ++R +R P+ P+ I L+ +P+++ H NHP Sbjct: 149 GGFGEIKHLLECLRSVCSDLLIRLCTRAPVFAPELFTEAFIMLLRSV-RPLWVIAHINHP 207 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + A++R ++GI + +Q+VLL+G+ND+P +LA L V + +KP YL DL Sbjct: 208 AELGKAQRQALTRCIDSGIPVQTQTVLLRGVNDEPAVLAELFHALVCMGVKPGYLFQTDL 267 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HNIKKVG 331 A GT+HFR+ +E+ I L+ ++SGL P + +DLP G GK + I + Sbjct: 268 ARGTAHFRVPLEKAASIWKELRTRLSGLSLPQFAVDLPNGGGKFPLSALLRYEDIISPLQ 327 Query: 332 NGSYCITDHHNIVHDYP 348 +G + ++ YP Sbjct: 328 DGRFSARGIDGKIYTYP 344 >gi|110835306|ref|YP_694165.1| hypothetical protein ABO_2445 [Alcanivorax borkumensis SK2] gi|110648417|emb|CAL17893.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 363 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 101/275 (36%), Positives = 151/275 (54%), Gaps = 3/275 (1%) Query: 46 LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVC 105 L+ NP+DP+ RQ + +E+ P DP+ + H+ + G++H+Y R LL + C Sbjct: 88 LMERGNPHDPLLRQVLSVADEMVAQPGFSADPLDEAEHTAVPGLLHKYHGRALLVVTGAC 147 Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V+CR+CFRR T LS K + AL ++ + I EVI +GGDPL LS++RL+++ Sbjct: 148 AVHCRYCFRRHF---PYQTHLSGKRWKQALEWLAARPDINEVILSGGDPLTLSNQRLEQL 204 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L L I H++ LR HSR P+V P+R+ L L + +H NHP E S + Sbjct: 205 LDALESIPHLRRLRIHSRTPVVIPERLEVGLKALLTWRRWQTVLVLHGNHPREISPALVE 264 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 L +AGI LL+QSVLL G+ND + LA L + + PYYLH D G +HF + Sbjct: 265 RCRDLRSAGITLLNQSVLLAGVNDRADTLAELSDRLFDAGVMPYYLHQLDAVQGAAHFAV 324 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 + E ++I A+L+ ++ G P + PG K Sbjct: 325 SDEAAREIHAALRARLPGFLVPRLTREEPGEPAKT 359 >gi|325475292|gb|EGC78477.1| hypothetical protein HMPREF9353_00492 [Treponema denticola F0402] Length = 338 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 108/318 (33%), Positives = 166/318 (52%), Gaps = 9/318 (2%) Query: 37 IALTPVIANLINPHNPNDPIAR--QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 + ++ LI P D A Q P E + E DP+G+ + +VH+Y Sbjct: 21 VLISSAFQKLIEEAEPEDSKALRLQVEPSACEKTVCSYETADPLGEQKYCITPYLVHQYE 80 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 +R+LL C YCR+CFRR + S+ + + + + YI++ Q+ E++ +GGDP Sbjct: 81 NRVLLITTGKCLSYCRYCFRRGLT-SRSQSYIGDGELKEVTDYIKKMPQVTEILVSGGDP 139 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L K+L+KVL LR IK ++R +R PI P+ EL+ LK+ KP+++ H N Sbjct: 140 LSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELFTEELLHLLKKT-KPLWLIPHIN 198 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 HP E E A++ AGI + SQ+VLLKG+ND+ + L L + IKP YL Sbjct: 199 HPAELGAEQTNALNACIEAGIPIQSQTVLLKGVNDNEKTLIKLFHKLTCMGIKPGYLFQL 258 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HNIKK 329 D AAGTSHFR+ ++E + + K+SGL +P + DLPGG GK + I++ Sbjct: 259 DPAAGTSHFRVPLKEALDLWERAEPKLSGLSRPQFAADLPGGGGKFSLSALIYSKKIIEQ 318 Query: 330 VGNGSYCITDHHNIVHDY 347 + S+ ++H Y Sbjct: 319 KEDSSFSALGADGVIHKY 336 >gi|254784867|ref|YP_003072295.1| KamA family protein [Teredinibacter turnerae T7901] gi|237684557|gb|ACR11821.1| KamA family protein [Teredinibacter turnerae T7901] Length = 335 Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 101/315 (32%), Positives = 164/315 (52%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +T DL + + + + + + + + ++ + + P +PNDP+ Q +P EE Sbjct: 22 ITKPADLLSRLSLDNQWLPAAERAAALFPLRVSEAFVSRMRPGDPNDPLLLQVLPLGEEF 81 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + P EDP+ + +P G++H+Y R+LL C + CR+CFRR Q S Sbjct: 82 AVTPGYSEDPLEEEKSNPAPGLIHKYHGRVLLIAAPHCAINCRYCFRRHFDYRQNTP--S 139 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + +AALAYI+ + +I EVI +GGDPL+L K+L+ +L + I H+ +R HSR+P+V Sbjct: 140 RTEWQAALAYIKTRPEIDEVILSGGDPLMLGDKQLRWLLTEIDAIPHITRIRIHSRLPVV 199 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P R L++ L + + H NH E + A L AGI LL+Q+VLLK I Sbjct: 200 LPDRFTSTLLELLSATRAQMVVVAHCNHSQEIDQSVEAVFEALKQAGITLLNQTVLLKNI 259 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND IL L + + + PYYLH D +GT+H+ + + +++ L ++ G P Sbjct: 260 NDSANILIELSKRLFQSGVLPYYLHLLDRVSGTAHYEVDELDARRLREELLAQLPGYLVP 319 Query: 308 FYILDLPGGYGKVKI 322 + + PG K I Sbjct: 320 TLVKEEPGAPSKTPI 334 >gi|281412181|ref|YP_003346260.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila RKU-10] gi|281373284|gb|ADA66846.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila RKU-10] Length = 365 Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 166/291 (57%), Gaps = 13/291 (4%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE--DPIGD 80 E+ +K + Y +LI+ +P+DPI + +P+++EL EE D + Sbjct: 18 EERGRLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKIIVPEEDEL----EEWGTLDASNE 73 Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 +++ KG+ H+YPD L + VC +CRFCFR+ + + V+ +D L YI+ Sbjct: 74 KSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRS 131 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQ 198 +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R S++P +P RI +P+L+ Sbjct: 132 HKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIRIGSKIPAFNPYRIIDDPDLLM 191 Query: 199 CLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 +++ K +Y+ NHP E + EAI A++ L +AG +L +Q+ LL+GINDDPE+L Sbjct: 192 MIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGAMLCNQTPLLRGINDDPEVLG 251 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 L+ + + PYY+ +G F + IEEG +I ISG+ + Sbjct: 252 ELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTKAISNISGVAK 302 >gi|42525588|ref|NP_970686.1| hypothetical protein TDE0069 [Treponema denticola ATCC 35405] gi|41815599|gb|AAS10567.1| conserved hypothetical protein TIGR00238 [Treponema denticola ATCC 35405] Length = 338 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 107/318 (33%), Positives = 168/318 (52%), Gaps = 9/318 (2%) Query: 37 IALTPVIANLINPHNPNDPIAR--QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 + ++ LI P D A Q P E + E DP+G+ + +VH+Y Sbjct: 21 VLISSAFQKLIEESEPEDSNALLLQVEPSACEKTVCSYETADPLGEQKYCITPYLVHQYE 80 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 +R+LL C YCR+CFRR + + + + + +A YI++ Q+ E++ +GGDP Sbjct: 81 NRVLLITTGKCLSYCRYCFRRGLTARSQ-SYIGDGELKAVTDYIKKMPQVTEILVSGGDP 139 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L K+L+KVL LR IK ++R +R PI P+ EL+ LK+ KP+++ H N Sbjct: 140 LSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELFTEELLHLLKKT-KPLWLIPHIN 198 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 HP E +E A++ AGI + SQ+VLLKG+ND+ + L L + IKP YL Sbjct: 199 HPAELGKEQTNALNACIEAGIPIQSQTVLLKGVNDNEKTLIKLFHKLTCMGIKPGYLFQL 258 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HNIKK 329 D AAGTSHFR+ ++E + ++ K+SGL +P + +DLP G GK + I++ Sbjct: 259 DPAAGTSHFRVPLKEALDLWERVEPKLSGLSRPQFAVDLPEGGGKFSLSALIYSKKIIEQ 318 Query: 330 VGNGSYCITDHHNIVHDY 347 + S+ ++H Y Sbjct: 319 KEDSSFSALGADGVIHKY 336 >gi|94500575|ref|ZP_01307106.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65] gi|94427365|gb|EAT12344.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65] Length = 345 Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 113/321 (35%), Positives = 168/321 (52%), Gaps = 3/321 (0%) Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69 SAQDL + E ++ + + + I + + I P NP DP+ Q P E Sbjct: 27 SAQDLLEQLSMPLELLEGAELGAAQFPIRVPQSFIDRIEPGNPQDPLFLQIWPFSAEGET 86 Query: 70 LPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128 P DP+ +N +P+ GIVH+Y R+LL + C ++CR+CFRR + LS Sbjct: 87 PPLGFVTDPLEENAANPVPGIVHKYQGRVLLIVNGSCAIHCRYCFRRHF--PYEDNNLSL 144 Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188 + E AL YI+ I EVI +GGDPL + KRL K++ + I HV LR HSR+PI Sbjct: 145 SEWEQALTYIENNPSINEVIMSGGDPLSSNDKRLFKLIDAIEAIPHVTRLRIHSRLPITL 204 Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 P RI P+L Q L + + + +HANH E S++ +A++RL + I LL+Q+VLLKGIN Sbjct: 205 PNRITPDLCQRLGSSRLNIVMVVHANHGNEISQDVHSAMTRLRSENIHLLNQTVLLKGIN 264 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 D + L +L + PYYLH D G H+ + + ++ L+ ++ G P Sbjct: 265 DTTQALIDLSEQLFAAGVMPYYLHLLDPVIGAHHYHVATDVALSLMDQLQAQLPGFLVPK 324 Query: 309 YILDLPGGYGKVKIDTHNIKK 329 + ++PG K I T K Sbjct: 325 LVREVPGEASKTLIYTQKPPK 345 >gi|189346964|ref|YP_001943493.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM 245] gi|189341111|gb|ACD90514.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM 245] Length = 323 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 107/308 (34%), Positives = 166/308 (53%), Gaps = 7/308 (2%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 +L+H +T+ + L + + + I + +T A L++ NP+DP+ + I Sbjct: 5 RLKHDLITTQEQLAEYVTLTDAEKEGICRCRPIMPMKITRHYAELLDRDNPDDPLRKLAI 64 Query: 62 PQKEELNILPEEREDPI--GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 P EEL P++ I + + P++GI+HRYP ++LL C +CRFCFR E V Sbjct: 65 PSVEELVRYPDDEAVDIHRDEAKYQPVEGIIHRYPGKVLLMYTTACFSHCRFCFRSEKVA 124 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 S L + + A+ Y+++ I +VIFTGGDP+ + +RL+ L +R I HV+I+R Sbjct: 125 S----TLDGRRLDKAIEYLRKNESIRDVIFTGGDPMHGNPERLEHALYEVRSIPHVEIIR 180 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +R PI P+ ELI+ L KP+ + HP E S+E + + RL++AGI+LL Sbjct: 181 ITTRAPIFAPEIFTDELIRMLS-WFKPLIMITSFIHPRELSDEVCSVLDRLSDAGIMLLQ 239 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q +LKGINDD + L L V+ R PYY ++ G HF L E +K++ L+ Sbjct: 240 QGPILKGINDDVDTLRTLYEKLVQHRTMPYYATWGIVSPGNRHFTLDGESARKLIRQLEN 299 Query: 300 KISGLCQP 307 SG C P Sbjct: 300 TTSGFCIP 307 >gi|325107258|ref|YP_004268326.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305] gi|324967526|gb|ADY58304.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305] Length = 346 Score = 186 bits (472), Expect = 4e-45, Method: Compositional matrix adjust. Identities = 95/294 (32%), Positives = 161/294 (54%), Gaps = 2/294 (0%) Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88 + SN + + + N + P P+DP+ RQ +P ++EL D +GD+ G Sbjct: 55 RSASNDFPLLVPESFLNRMQPGEPDDPLLRQILPVEQELQPKQGFTTDAVGDDAARIAPG 114 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 ++ +Y R L+ L C V+CR+CFRR + S + + L I ++ + E++ Sbjct: 115 LLQKYHGRALMITLGTCAVHCRYCFRRHYPYHDEPR--SREQWQETLNVIADRPDLEEIL 172 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 +GGDPL+L+ +RL +++ L I H+Q LR H+R+PIV P R+ + + L++ Sbjct: 173 LSGGDPLVLNDRRLGELIDDLAKIPHLQRLRIHTRLPIVLPDRVTEQFLSLLQDTRLQPV 232 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + +HANHP E + A++ RL+ AG +L+Q+VLL+G+ND + A L R + + P Sbjct: 233 VVVHANHPAEVVADCAASLKRLSRAGFPVLNQAVLLRGVNDTVDTQAELCRRLINAGVLP 292 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 YYLH D G +HF G+ IV +LKE++ G P ++ ++ G K ++ Sbjct: 293 YYLHQLDRIQGAAHFETDAALGKAIVQALKERLPGYAVPRFVREIAGEPSKTEM 346 >gi|300113201|ref|YP_003759776.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii C-113] gi|299539138|gb|ADJ27455.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii C-113] Length = 335 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 96/270 (35%), Positives = 149/270 (55%), Gaps = 2/270 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +PNDP+ RQ P E I P DP+GD P G++ +Y R+LL C ++CR Sbjct: 65 DPNDPLFRQVFPLHAEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCR 124 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + AL YI + I EVI +GGDPL L+ RL ++ +TL Sbjct: 125 YCFRRHFPYGDHNP--AQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLA 182 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I HV+ LR H+R+P+V P+R++ L+Q L+E + IHANH E + AA++ L Sbjct: 183 TISHVKRLRIHTRLPVVLPERVDNHLLQWLEETSLQKVVVIHANHVNELDDRVAAALNDL 242 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 ++ G L +Q+VLL+GIND L++L + + PYYLH D G +HF + + Sbjct: 243 SHVGCRLFNQTVLLRGINDKVGALSDLSEGLFDAGVLPYYLHLLDKVQGAAHFEVDLMSA 302 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320 Q++ +L+ ++ G P + + G K+ Sbjct: 303 QRLHRTLRARLPGYLVPLLVQEQAGAPSKL 332 >gi|53804590|ref|YP_113783.1| hypothetical protein MCA1321 [Methylococcus capsulatus str. Bath] gi|53758351|gb|AAU92642.1| conserved hypothetical protein TIGR00238 [Methylococcus capsulatus str. Bath] Length = 323 Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust. Identities = 100/286 (34%), Positives = 155/286 (54%), Gaps = 2/286 (0%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 E + + + A + P +P DP+ RQ +P +EL DP+GD + G+ Sbjct: 32 EAAGKFPFRVPRAYARKMRPGDPYDPLLRQVLPLAQELASPEGFVGDPVGDRPALKVPGL 91 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +H+Y R LL C V+CR+CFRRE + + + + +AAL YI ++ E+I Sbjct: 92 LHKYQGRALLITTGACAVHCRYCFRREFPYGE--SQFTRQREKAALDYIVRDPELTEIIL 149 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL+LS RL ++ K L I H++ LR HSRVP+V P RI+ L++ L + Sbjct: 150 SGGDPLLLSDDRLVRLTKQLTAIPHLRRLRVHSRVPLVLPSRIDERLLEILAGHRLKTVV 209 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 IHANHP E E ++ ++ + AG+ LL+QSVLL+ +ND L L E + PY Sbjct: 210 VIHANHPRELDAETVSVLAAMRRAGLTLLNQSVLLRQVNDSVSALCELSERLFECGVLPY 269 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 YLH D GT+HF + E + + +L+ ++ G P + ++ G Sbjct: 270 YLHLLDRVRGTAHFEVPEAEARALHEALRRRLPGFLVPRLVREVEG 315 >gi|95930510|ref|ZP_01313245.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] gi|95133345|gb|EAT15009.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] Length = 365 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 111/324 (34%), Positives = 174/324 (53%), Gaps = 26/324 (8%) Query: 7 TLTSAQDLYN-ANLIKK-EQ----IDEIKEI--SNHYSIALTPVIANLINPHNPNDPIAR 58 T T Q L N N I++ EQ D+ ++I N + TP A+L++ +P PI + Sbjct: 9 TQTWQQQLANFVNTIERLEQYVNLTDDERQILEQNKTTWGTTPYFASLMDADDPQCPIRK 68 Query: 59 QFIPQKEELN---------ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 Q IP E + E R D I +Y DR+ + C +YC Sbjct: 69 QVIPSSLEQQNTYGMDDYLMWKENR-----DTEEQRPDSIARQYKDRVAFTVTQTCGIYC 123 Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 R CFR+E+V G + + + L +I + ++ +V+ TGGDPL+L +++ +++ L Sbjct: 124 RHCFRKELVVD--GDLTFDFNVDDGLEWISQHPEVRDVLITGGDPLLLPDEKIAYLIERL 181 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAIS 228 R I H+Q++RF SRVPIV PQRI PEL L K P+++ NHP E +E A+ Sbjct: 182 RAIPHIQMIRFGSRVPIVLPQRITPELKNILGGNHKVPIWLNTQCNHPKELTEHTAQAVY 241 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288 L G+ + +Q+VLLKGINDD E L + + +RI+PYY+ + + A G HFR +E Sbjct: 242 DLMTCGVNVGNQAVLLKGINDDVETFRELHQKLLRVRIRPYYVFYCEAAPGIDHFRTPVE 301 Query: 289 EGQKIVA-SLKEKISGLCQPFYIL 311 +G +++ +L+ +GL QP Y++ Sbjct: 302 KGAELIRDALRGHTTGLAQPMYVV 325 >gi|167758002|ref|ZP_02430129.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704] gi|167664434|gb|EDS08564.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704] Length = 363 Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust. Identities = 107/303 (35%), Positives = 175/303 (57%), Gaps = 14/303 (4%) Query: 24 QIDEIKEIS----NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 QI+E +I+ N Y +++ +L+NP + NDPI + IP E+++ D G Sbjct: 23 QINEYGDIASKVLNKYPMSIPRYYLSLVNPDDANDPIRKMCIPSFLEMDL--AGTFDTSG 80 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 +++++ L+G+ H+YP +L+ + C +YCR+CFR+ MVGS GT D + A++YI Sbjct: 81 ESSNTKLQGLQHKYPQTVLMLSTNRCAMYCRYCFRKRMVGS--GTQEVVADIKEAISYIL 138 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197 + +I V+ +GGD +L +++ L +L I H+ +RF ++ P+V PQRI + L Sbjct: 139 KHEEITNVLISGGDSFLLDTDIIREYLDSLSAIGHLDYIRFGTKTPVVFPQRILEDSRLQ 198 Query: 198 QCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 L+E G K +YI NHP E +E++I+A+ L G+I+ +Q+VLLKG+ND PE LA Sbjct: 199 DILREYGHKKQIYIVTQFNHPRELTEDSISAVRCLQGLGLIVKNQTVLLKGVNDCPETLA 258 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKISGLCQPF-YILDL 313 L R F EL I PYY+ G + F++ ++ G I+ K +G + F ++L Sbjct: 259 RLFRRFTELGIIPYYIFQCRPVTGVMNQFQVPLQAGYDIIEQAKAMQNGNGKCFRFVLSN 318 Query: 314 PGG 316 P G Sbjct: 319 PDG 321 >gi|77166085|ref|YP_344610.1| hypothetical protein Noc_2627 [Nitrosococcus oceani ATCC 19707] gi|254435948|ref|ZP_05049455.1| KamA family protein [Nitrosococcus oceani AFC27] gi|76884399|gb|ABA59080.1| L-lysine 2,3-aminomutase [Nitrosococcus oceani ATCC 19707] gi|207089059|gb|EDZ66331.1| KamA family protein [Nitrosococcus oceani AFC27] Length = 335 Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 97/270 (35%), Positives = 148/270 (54%), Gaps = 2/270 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +PNDP+ RQ P E I P DP+GD P G++ +Y R+LL C ++CR Sbjct: 65 DPNDPLFRQVFPLHAEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCR 124 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + AL YI + I EVI +GGDPL L+ RL ++ +TL Sbjct: 125 YCFRRHFPYGDHNP--AQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLA 182 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I HV+ LR H+R+P+V P+R++ L+Q L+ + IHANH E + AA++ L Sbjct: 183 TISHVKRLRIHTRLPVVLPERVDHHLLQWLEGTSLQKVVVIHANHVNELDDRVAAALNDL 242 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + AG L +Q+VLL+GIND L++L + + PYYLH D G +HF + I Sbjct: 243 SRAGCRLFNQTVLLRGINDKVSALSDLSEGLFDTGVLPYYLHLLDKVQGAAHFEVDIITA 302 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320 Q++ +L+ ++ G P + + G K+ Sbjct: 303 QRLHRTLRARLPGYLVPLLVQEQAGAPSKL 332 >gi|239994935|ref|ZP_04715459.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii ATCC 27126] Length = 341 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 100/283 (35%), Positives = 157/283 (55%), Gaps = 3/283 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 +L+ NPNDP+ Q +P +E P EDP+ D + + KGI+H+Y R+LL + Sbjct: 59 FVDLMEKENPNDPLFLQVMPLSDEFLTSPGYSEDPL-DEHDTAGKGILHKYDSRVLLMVR 117 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C V CR+CFRR + +S L Y++ ++I EVIF+GGDPL+ + L Sbjct: 118 TGCAVNCRYCFRRHFPYADNA--VSKHQWLDVLEYLRSNNKINEVIFSGGDPLMAKDEHL 175 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 + + I H++ LR HSR+P+V P+RI+ + ++ + +HANH E SE Sbjct: 176 SWLANEITTIPHIKRLRIHSRLPVVLPERISHDFVEWFTALPLQKVLVLHANHANEMSET 235 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 + + L G+ LL+QSVLLKG+ND + +++L T E + PYYLH D G SH Sbjct: 236 LKSRLKTLRERGVTLLNQSVLLKGVNDSGDAISDLSETLFEAGVLPYYLHVLDKVQGASH 295 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 F ++ +EG++I+ +++ G P + ++ G GK ID H Sbjct: 296 FYVSDDEGREIMEEAIKRLPGFLVPKLVREIGGQPGKTPIDLH 338 >gi|269469270|gb|EEZ80789.1| lysine 2,3-aminomutase [uncultured SUP05 cluster bacterium] Length = 314 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 99/284 (34%), Positives = 163/284 (57%), Gaps = 6/284 (2%) Query: 34 HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93 H+ I + ANLI+ +NP DP+ +Q I + E P+ D +++P++G++H+Y Sbjct: 32 HFPIKIPLEFANLIDKNNPEDPLLKQVINSQARFGS-SEFFLSPLDDESNAPVEGLIHKY 90 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P+R+LL VC ++C++CFR+ ++ + + A YI+ +QI EVI +GGD Sbjct: 91 PNRVLLIASRVCAIHCQYCFRQNFNYAEHDAL---SNWLAIEDYIRAHTQINEVILSGGD 147 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL LS ++LQ +++ + I H++ LR HSR +V P RI +L Q L + V + +H+ Sbjct: 148 PLSLSDEKLQALIQKIERIPHIRTLRIHSRSAVVTPSRITDQLAQILNQTSLNVVVVLHS 207 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NH E S E + I +L+ I LL+QSVLLKG+ND + L++L + + PYYLH Sbjct: 208 NHANELSSEFVKNIGKLSQ--ITLLNQSVLLKGVNDSAQALSDLSLQLFDAGVLPYYLHL 265 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 D +G HF + + +++ LK+ +SG P + D G + Sbjct: 266 LDKVSGAEHFLVGDQCAKELHQQLKKNLSGYLVPRLVRDENGEF 309 >gi|288937552|ref|YP_003441611.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola At-22] gi|288892261|gb|ADC60579.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola At-22] Length = 342 Score = 185 bits (470), Expect = 7e-45, Method: Compositional matrix adjust. Identities = 102/274 (37%), Positives = 153/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ + +EE + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPNDPLLRQVLTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +GT ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYAENQGT---RRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I HV+ LR HSR+PIV P RI L + + V + H NH E +E AA++ Sbjct: 183 EAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAM 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E Sbjct: 243 LRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L ISG P ++ G K +D Sbjct: 303 AREIMRELLTLISGYMVPKLAREIGGEPSKTPLD 336 >gi|157374957|ref|YP_001473557.1| lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3] gi|157317331|gb|ABV36429.1| Lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3] Length = 397 Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust. Identities = 99/293 (33%), Positives = 174/293 (59%), Gaps = 4/293 (1%) Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP-LKGIVHRYPDRI 97 +TP IA L++ + PI Q++P++ E+++ P+E D + +++ P IVHRYP+R+ Sbjct: 80 ITPYIAQLMDKDDQACPIRIQYVPEQNEMDVAPQEMGDQLAEDDMMPDGTSIVHRYPNRV 139 Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + ++C YCR C R+ MV S V+S + ++ Y++E ++ +V+ +GGDPL+L Sbjct: 140 LFLVHNICGAYCRHCTRKRMV-SDPLNVISMERIRKSVEYLREHPEVQDVLLSGGDPLLL 198 Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + +L +VL +R + ++ILR SR+P P RI PEL Q L + + + NHP Sbjct: 199 TDDKLDQVLSMIREARPDLKILRIGSRLPTQLPTRITPELCQILVK-NRVTLLNTQVNHP 257 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + + ++ L +GI+L +QSVL+KG+ND E++ +L+ V I+PYY++ D Sbjct: 258 KEITPLFVKHMAMLRTSGIMLGNQSVLIKGVNDSVEVMRDLVMDLVSNGIRPYYVYSMDP 317 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 A G S F+++ + +I ++ +SG P +I+D GG GK+ + ++K Sbjct: 318 APGNSKFQVSYDRMLEIYHGIRGWVSGPAIPTFIVDGIGGLGKMPVQPEYVRK 370 >gi|206577764|ref|YP_002240896.1| KamA family protein [Klebsiella pneumoniae 342] gi|290512290|ref|ZP_06551657.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55] gi|206566822|gb|ACI08598.1| KamA family protein [Klebsiella pneumoniae 342] gi|289775285|gb|EFD83286.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55] Length = 342 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 102/274 (37%), Positives = 153/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ + +EE + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPNDPLLRQVLTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +GT ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYAENQGT---RRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I HV+ LR HSR+PIV P RI L + + V + H NH E +E AA++ Sbjct: 183 EAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAM 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E Sbjct: 243 LRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L ISG P ++ G K +D Sbjct: 303 AREIMRELLTLISGYMVPKLAREIGGEPSKTPLD 336 >gi|225175029|ref|ZP_03729026.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter alkaliphilus AHT 1] gi|225169669|gb|EEG78466.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter alkaliphilus AHT 1] Length = 371 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 108/333 (32%), Positives = 182/333 (54%), Gaps = 23/333 (6%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK-EELN--------IL 70 + +E+ D I+ + TP +L++ NP PI RQ IP K E +N + Sbjct: 24 VTEEEADAIRNCETRW--GTTPYFVSLMDKENPECPIRRQVIPSKHENVNEFGIENYLVY 81 Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 E R DN+ I +Y DRI + + + C +YCR CFR+E+V + ++ D Sbjct: 82 KENR-----DNHEQRPDTIARQYKDRIAMTITNHCGIYCRHCFRKELVVDK--SMQLRFD 134 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + L ++++ ++ EV+ TGGDP +L +++ +++ LR + H++++RF SR+PIV PQ Sbjct: 135 VDEGLEWVRQHPELREVLITGGDPFLLPDDQIEYIIRKLREVPHIEMIRFGSRLPIVLPQ 194 Query: 191 RINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 RI P L + L + K P+++ NH E +E AI L G+ + +Q+VL+KGIND Sbjct: 195 RITPGLKKVLGQYHKVPIWVNTQCNHAKEITERTAQAIWDLLTCGVNVGNQAVLMKGIND 254 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKISGLCQPF 308 D L + + +RI+PYY+ + + A G HFR +E+G +++ +L+ SGL QP Sbjct: 255 DEHSFQQLHQKLLSIRIRPYYVFYLEPAPGIDHFRTPVEKGAELIRDTLRGHTSGLAQPM 314 Query: 309 YILDLPGGYGKVKI-DTHNIKKVGNGSYCITDH 340 Y+ + GKV + + IK+ Y + +H Sbjct: 315 YV--IATNIGKVPLMPDYYIKEKNEKEYILQNH 345 >gi|168231369|ref|ZP_02656427.1| KamA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472138|ref|ZP_03078122.1| KamA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458502|gb|EDX47341.1| KamA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205334318|gb|EDZ21082.1| KamA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 342 Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 100/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 +AG+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHAGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|254427978|ref|ZP_05041685.1| KamA family protein [Alcanivorax sp. DG881] gi|196194147|gb|EDX89106.1| KamA family protein [Alcanivorax sp. DG881] Length = 335 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 99/276 (35%), Positives = 152/276 (55%), Gaps = 3/276 (1%) Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 +L+ NP+DP+ RQ + EE + DP+ + +H+ + G++H+Y R LL + Sbjct: 59 DLMERGNPDDPLLRQVLSAPEERQVHQGYSADPLDEADHTAVPGLLHKYHGRALLVVTGA 118 Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C V+CR+CFRR T LS K E AL ++ + I EVI +GGDPL L+++RL++ Sbjct: 119 CAVHCRYCFRRHF---PYQTHLSGKRWEQALEWLAARPDIHEVILSGGDPLTLTNRRLEQ 175 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224 +L L I H++ LR HSR P+V P+R++ L L + +HANHP E S + Sbjct: 176 LLDALAAIPHLRRLRIHSRTPVVIPERLDAGLKALLTRDRWQTVLVLHANHPREISPALV 235 Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284 A +AG+ LL+QSVLL G+ND + LA+L + + PYYLH D G +HF Sbjct: 236 ARCRDWRSAGMTLLNQSVLLAGVNDRVDTLADLSDALFDAGVLPYYLHQLDAVQGAAHFA 295 Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 + +++ A L+ ++ G P + PG K Sbjct: 296 VPDVIARELHADLRARLPGFLVPRLTREEPGEPAKT 331 >gi|288941476|ref|YP_003443716.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum DSM 180] gi|288896848|gb|ADC62684.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum DSM 180] Length = 335 Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust. Identities = 101/316 (31%), Positives = 157/316 (49%), Gaps = 2/316 (0%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R T +L + + +I ++ + + + + +P+DP+ RQ +P Sbjct: 18 RVTAFTQVDELLAFLELDRTRIPDLDAEPESWGLRVPRTFVERMRRGDPDDPLLRQVLPL 77 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 E + DP+GD G++ +Y R LL + C ++CR+CFRR G Sbjct: 78 TAERQQVAGYVTDPVGDACAERAPGLLVKYAGRALLMVTGACAIHCRYCFRRHFPYQDLG 137 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 S E AL I + EV+ +GGDPL+L RL +++ L I H+Q LR HSR Sbjct: 138 P--SQARLERALDEIARDPSLTEVVLSGGDPLMLDDDRLDALIRDLECITHLQRLRLHSR 195 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+V P R+ L L + IHANHP E E +A+ AG+ LL+QSVL Sbjct: 196 VPVVSPSRLTARLAASLTRGRFASTLVIHANHPRELDEVVRSALLDWRAAGVTLLNQSVL 255 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+ND EILA L + PYYLH D AG++HF + E ++++ ++ ++ G Sbjct: 256 LRGVNDRIEILAELSERLFACGVLPYYLHGLDPVAGSAHFEVDDAEARRLLDGVRARLPG 315 Query: 304 LCQPFYILDLPGGYGK 319 P + ++PG + K Sbjct: 316 YLVPRLVREIPGDHSK 331 >gi|326794182|ref|YP_004312002.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea MMB-1] gi|326544946|gb|ADZ90166.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea MMB-1] Length = 336 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 95/275 (34%), Positives = 155/275 (56%), Gaps = 4/275 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I N NDP+ Q +PQ +EL + +DP+ + NH+P K +VH+Y R+L+ +C Sbjct: 60 IEKGNLNDPLLLQVLPQHQELADVEGYLKDPLQEANHTPQKALVHKYESRVLVITTGICA 119 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR G + L+ + ++ + Y+ I EVI +GGDPL+L K L + Sbjct: 120 VNCRYCFRRHFPYGDNQ---LAQSEWQSVIDYVTNDKNINEVILSGGDPLMLKDKVLAER 176 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 +++L I H++ LR H+R+P+V P RI+ ELI + ++ + + H NH E + + Sbjct: 177 VRSLESIAHLKRLRIHTRLPVVIPSRIDDELIYWMSQSRLSIVLVTHINHANEIDQAVES 236 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 A+ RL G+ LL+Q VLLK +ND E +L ++ + PYY+ D AG +HF + Sbjct: 237 AMLRLKQIGVTLLNQGVLLKNVNDSVEAQVDLSNRLFQVGLLPYYMFTFDPVAGAAHFDI 296 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 IE+ Q+++ + +K+ G P ++PG K Sbjct: 297 PIEDAQRLMGEVTKKLPGYLVPKLAKEIPGRASKT 331 >gi|62182782|ref|YP_219199.1| hypothetical protein SC4212 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62130415|gb|AAX68118.1| putative aminomutase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322717283|gb|EFZ08854.1| Elongator protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 342 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWRVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G++LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHVGVMLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|296100915|ref|YP_003611061.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055374|gb|ADF60112.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 342 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 103/274 (37%), Positives = 155/274 (56%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ +Q + +EE P DP+ + N S + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLKQTLTAQEEFITAPGYSTDPLEEQN-SVVPGLLHKYLNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL YI S++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQVALDYIAAHSELDEIIFSGGDPLMAKDYELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L+ L+++ V + H NH E + AA+ R Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDGLVSRLEQSRLQVLLVNHINHANEIDDAFRAAMVR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+G+ND+ +LA+L + + PYYLH D G +HF +T EE Sbjct: 243 LRKAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVTDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++IV L +SG P ++ G K +D Sbjct: 303 ARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLD 336 >gi|152973019|ref|YP_001338165.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150957868|gb|ABR79898.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 342 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 102/274 (37%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ + +EE + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPNDPLLRQVLTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +GT ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYAENQGT---RRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I HV+ LR HSR+PIV P RI L + + V + H NH E E AA++ Sbjct: 183 EAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAM 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E Sbjct: 243 LRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L ISG P ++ G K +D Sbjct: 303 AREIMRELLTLISGYMVPKLAREIGGEPSKTPLD 336 >gi|308048933|ref|YP_003912499.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica DSM 9799] gi|307631123|gb|ADN75425.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica DSM 9799] Length = 400 Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 97/293 (33%), Positives = 173/293 (59%), Gaps = 4/293 (1%) Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPL-KGIVHRYPDRI 97 +TP +A L++ ++PN PI Q++P+++E++I P E D + +++ P +VHRYP+R+ Sbjct: 85 ITPYVAQLMDKNDPNCPIRIQYVPEQDEMHIAPHEMGDQLAEDDMMPEGTSLVHRYPNRV 144 Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + ++C YCR C R+ MV S V+ ++ Y+++ ++ +V+ +GGDPL+L Sbjct: 145 LFLVHNICGAYCRHCTRKRMV-SDPLNVIDMARIRRSVEYLRDHPEVQDVLLSGGDPLLL 203 Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + +L ++L +R + ++ILR SR+ P R+ PEL+ L + + I NHP Sbjct: 204 TDSKLDEILSMIREARPDLKILRIGSRLLAQLPTRVTPELVDVLVK-NRVTLINTQVNHP 262 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + I + L AG++L +QSV++KG+NDD E++ +L+ V I+PYY++ D Sbjct: 263 REITPLFIKHTTMLRRAGVMLGNQSVMIKGVNDDVEVMRDLVMDLVSNGIRPYYVYSMDP 322 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 A G S F ++ + +I ++ +SG P +I+D GG GK+ + +KK Sbjct: 323 APGNSKFMVSYDRMLEIYHGIRGWVSGPAIPTFIVDGIGGLGKMPVQPEYVKK 375 >gi|224586177|ref|YP_002639976.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224470705|gb|ACN48535.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 342 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G++LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHVGVMLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|289809541|ref|ZP_06540170.1| hypothetical protein Salmonellaentericaenterica_35962 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 337 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 62 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 120 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 121 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 178 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 179 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKL 238 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF +T +E Sbjct: 239 RHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 298 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 299 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 331 >gi|161505162|ref|YP_001572274.1| hypothetical protein SARI_03299 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866509|gb|ABX23132.1| hypothetical protein SARI_03299 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 342 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 98/273 (35%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+P+V P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPVVIPARITNELVARFDQSRLQILLVNHTNHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF +T +E Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAKTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMITDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|204926922|ref|ZP_03218124.1| KamA family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323587|gb|EDZ08782.1| KamA family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322615499|gb|EFY12419.1| hypothetical protein SEEM315_10044 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618559|gb|EFY15448.1| hypothetical protein SEEM971_10303 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622028|gb|EFY18878.1| hypothetical protein SEEM973_17977 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627100|gb|EFY23892.1| hypothetical protein SEEM974_00362 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631059|gb|EFY27823.1| hypothetical protein SEEM201_05188 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637722|gb|EFY34423.1| hypothetical protein SEEM202_03729 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642386|gb|EFY38990.1| hypothetical protein SEEM954_03902 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645647|gb|EFY42172.1| hypothetical protein SEEM054_18690 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650513|gb|EFY46921.1| hypothetical protein SEEM675_15304 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653465|gb|EFY49795.1| hypothetical protein SEEM965_03844 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659708|gb|EFY55951.1| hypothetical protein SEEM19N_08219 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662081|gb|EFY58297.1| hypothetical protein SEEM801_16251 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666170|gb|EFY62348.1| hypothetical protein SEEM507_03054 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672590|gb|EFY68701.1| hypothetical protein SEEM877_15409 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676020|gb|EFY72091.1| hypothetical protein SEEM867_14623 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680504|gb|EFY76542.1| hypothetical protein SEEM180_12388 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684602|gb|EFY80606.1| hypothetical protein SEEM600_17732 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192917|gb|EFZ78143.1| hypothetical protein SEEM581_21258 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197207|gb|EFZ82347.1| hypothetical protein SEEM501_11096 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201676|gb|EFZ86740.1| hypothetical protein SEEM460_21711 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206190|gb|EFZ91152.1| hypothetical protein SEEM020_11145 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213200|gb|EFZ98002.1| hypothetical protein SEEM6152_12673 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215572|gb|EGA00316.1| hypothetical protein SEEM0077_07868 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219558|gb|EGA04043.1| hypothetical protein SEEM0047_21028 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227861|gb|EGA12015.1| hypothetical protein SEEM0055_19496 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229030|gb|EGA13159.1| hypothetical protein SEEM0052_05250 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236358|gb|EGA20434.1| hypothetical protein SEEM3312_18736 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237522|gb|EGA21583.1| hypothetical protein SEEM5258_19717 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241812|gb|EGA25841.1| hypothetical protein SEEM1156_12637 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248039|gb|EGA31976.1| putative lysine aminomutase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254629|gb|EGA38440.1| putative lysine aminomutase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258311|gb|EGA41988.1| putative lysine aminomutase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259588|gb|EGA43222.1| hypothetical protein SEEM8284_10232 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265861|gb|EGA49357.1| putative lysine aminomutase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270305|gb|EGA53753.1| putative lysine aminomutase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 342 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|16763155|ref|NP_458772.1| hypothetical protein STY4693 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144634|ref|NP_807976.1| hypothetical protein t4385 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213621858|ref|ZP_03374641.1| hypothetical protein SentesTyp_31779 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648405|ref|ZP_03378458.1| hypothetical protein SentesTy_14649 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865531|ref|ZP_03387650.1| hypothetical protein SentesT_37675 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25305130|pir||AH1045 conserved hypothetical protein yjeK [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505463|emb|CAD06813.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140273|gb|AAO71836.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 342 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|213052305|ref|ZP_03345183.1| hypothetical protein Salmoneentericaenterica_04842 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428698|ref|ZP_03361448.1| hypothetical protein SentesTyphi_26121 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 342 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|253991228|ref|YP_003042584.1| hypothetical protein PAU_03754 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782678|emb|CAQ85842.1| conserved hypothetical Protein [Photorhabdus asymbiotica] Length = 342 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 103/274 (37%), Positives = 153/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +PNDP+ Q I EE NI+P DP+ D S + G++H+Y +R LL + C V CR Sbjct: 67 DPNDPLLLQVITAPEEFNIVPGFSADPL-DEQRSVVPGLLHKYRNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + + AL YIQ+ ++ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYEDNKG---NKHNWQQALNYIQQHPELDEIIFSGGDPLMAKDHELDWLISNL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR H+R+P+V P RI L L ++ V + H NH E + ++ Sbjct: 183 EQISHIKRLRIHTRLPVVIPARITTTLCNRLAQSRLQVIMVTHINHENEIDQSLRNSMML 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L +AGI LL+QSVLL+G+N+ P+ILANL + I PYY+H D G +HF ++ EE Sbjct: 243 LKHAGITLLNQSVLLRGVNNHPDILANLSNALFDAGILPYYIHVLDKVQGAAHFMVSDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + I+ L K+SG P ++ G K +D Sbjct: 303 ARGIIRELLTKVSGYLVPRLAREIGGESSKTPLD 336 >gi|168263313|ref|ZP_02685286.1| KamA family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205348035|gb|EDZ34666.1| KamA family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 342 Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|87118912|ref|ZP_01074811.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121] gi|86166546|gb|EAQ67812.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121] Length = 351 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 96/270 (35%), Positives = 149/270 (55%), Gaps = 2/270 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 N NDP+ RQ +P EE+ + DP+ + +H+P K +VH+Y RIL+ C + CR Sbjct: 74 NLNDPLLRQILPIDEEMKQVKGYVTDPLAELDHNPKKALVHKYSSRILVITSGSCAINCR 133 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + L+ + ++ L+YIQ QI EVI +GGDPL++ K+L +++ L Sbjct: 134 YCFRRHFPYANNH--LAPAEWDSLLSYIQTHPQINEVILSGGDPLMMKDKQLSQLISRLE 191 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 + ++ LR H+R+PIV P RIN EL+ + V + +H NH E + I A S+L Sbjct: 192 ALPQLKRLRIHTRLPIVIPSRINNELLNWASQTRLKVIMVLHINHANEIDGKVIEACSKL 251 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 A G+ LL+Q V+LK +ND E L + I PYY+ D G SHF +TI++ Sbjct: 252 AKIGVRLLNQGVILKNVNDTAEAQIALSEALFDADILPYYMFTLDPVEGASHFDITIDQA 311 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320 Q+++ + + G P ++PG K Sbjct: 312 QQLMGQVAANLPGYLVPKLAKEIPGKTAKT 341 >gi|165919300|ref|ZP_02219386.1| KamA family protein [Coxiella burnetii RSA 334] gi|165917023|gb|EDR35627.1| KamA family protein [Coxiella burnetii RSA 334] Length = 342 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 95/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + +++ +L+N + + + +++++++ + + NPNDP+ Q +PQ Sbjct: 12 RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQILPQAH 71 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Q Sbjct: 72 ELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQNTP- 130 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 Y++ S I EVI +GGDPL++ + L + ++ I ++ LR H+R+P Sbjct: 131 -GRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIHTRLP 189 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 IV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+QSVLLK Sbjct: 190 IVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQSVLLK 249 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + + G Sbjct: 250 NVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMKHLPGYL 309 Query: 306 QPFYILDLPGGYGKVKI 322 P +I ++PG K + Sbjct: 310 VPKFIREIPGALSKTPL 326 >gi|227326240|ref|ZP_03830264.1| hypothetical protein PcarcW_02548 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 335 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 102/290 (35%), Positives = 158/290 (54%), Gaps = 5/290 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A + NP+DP+ Q + +EE P DP+ D HS + G++H+Y Sbjct: 36 FALRVPRAFAARMQKGNPDDPLLLQVLTAREEFIATPGFTHDPL-DEQHSVVPGLLHKYH 94 Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 +R LL + C V CR+CFRR +G + + AL YI++ S++ E+IF+GGD Sbjct: 95 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHSELDEIIFSGGD 151 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+ L ++ L +I H++ LR HSR+P+V P RI L L + V + H Sbjct: 152 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 211 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E + +++RL AG+ LL+QSVLL+G+ND+ E LA L + I PYYLH Sbjct: 212 NHPQEIDPDLTQSMARLRRAGVTLLNQSVLLRGVNDNAETLARLSNALFDAGILPYYLHV 271 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D G +HF + E + +V +L +K+SG P ++ G K +D Sbjct: 272 LDKVQGAAHFLVDDNEARVLVKALLKKVSGYLVPRLAREIGGEASKTPLD 321 >gi|168237064|ref|ZP_02662122.1| KamA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737300|ref|YP_002117279.1| KamA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712802|gb|ACF92023.1| KamA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290014|gb|EDY29373.1| KamA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 342 Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSHLQILLVNHINHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|161617604|ref|YP_001591569.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553577|ref|ZP_02347326.1| KamA family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168822537|ref|ZP_02834537.1| KamA family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444516|ref|YP_002043593.1| KamA family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|200386594|ref|ZP_03213206.1| KamA family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205355095|ref|YP_002228896.1| hypothetical protein SG4176 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859482|ref|YP_002246133.1| hypothetical protein SEN4103 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161366968|gb|ABX70736.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403179|gb|ACF63401.1| KamA family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|199603692|gb|EDZ02237.1| KamA family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205274876|emb|CAR39942.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322004|gb|EDZ09843.1| KamA family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205341061|gb|EDZ27825.1| KamA family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206711285|emb|CAR35663.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320088762|emb|CBY98520.1| L-lysine 2,3-aminomutase LAM; KAM [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326630252|gb|EGE36595.1| hypothetical protein SG9_4262 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 342 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|328675885|gb|AEB28560.1| Lysine 2,3-aminomutase [Francisella cf. novicida 3523] Length = 328 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 98/296 (33%), Positives = 158/296 (53%), Gaps = 4/296 (1%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 +++ + + + AN I N NDP+ +Q +P +E I DP+ + N++ + G+ Sbjct: 36 DVTKSFKMIVPKSFANRIQKGNINDPLLKQVLPIVDEEVIDQAYSSDPLDEKNYNKVPGL 95 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI Sbjct: 96 LHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKDNIPGRKDWLQAFEYIANDQSIEEVIL 153 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+RI +L++ L E + Sbjct: 154 SGGDPLLNNDEVLEFFIENIQQIAHIKRLRIHSRIPVVLPERITTKLLRVLSEHRLDTIL 213 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 IH NHP E + + + GII+L+QS LLK INDD +L L + ++ PY Sbjct: 214 VIHVNHPNELDDNISEVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPY 273 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 Y+H D +GT H+ ++ + I+ L E SG P ++PG K + H Sbjct: 274 YIHSLDTVSGTKHY--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFH 327 >gi|153206246|ref|ZP_01945509.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177'] gi|154706630|ref|YP_001423526.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111] gi|212217836|ref|YP_002304623.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154] gi|120577376|gb|EAX34000.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177'] gi|154355916|gb|ABS77378.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111] gi|212012098|gb|ACJ19478.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154] Length = 342 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + +++ +L+N + + + +++++++ + + NPNDP+ Q +PQ Sbjct: 12 RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQILPQAH 71 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Q Sbjct: 72 ELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQNTP- 130 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 Y++ S I EVI +GGDPL++ + L + ++ I ++ LR H+R+P Sbjct: 131 -GRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIHTRLP 189 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 IV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+QSVLLK Sbjct: 190 IVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQSVLLK 249 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + + G Sbjct: 250 NVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMKHLPGYL 309 Query: 306 QPFYILDLPGGYGKVKI 322 P ++ ++PG K + Sbjct: 310 VPKFVREIPGALSKTPL 326 >gi|56416128|ref|YP_153203.1| hypothetical protein SPA4150 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197365054|ref|YP_002144691.1| hypothetical protein SSPA3854 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56130385|gb|AAV79891.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096531|emb|CAR62140.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 342 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAVHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF +T +E Sbjct: 244 HHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|198243525|ref|YP_002218222.1| KamA family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197938041|gb|ACH75374.1| KamA family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326626024|gb|EGE32369.1| KamA family protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 342 Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|261342808|ref|ZP_05970666.1| KamA family protein [Enterobacter cancerogenus ATCC 35316] gi|288314849|gb|EFC53787.1| KamA family protein [Enterobacter cancerogenus ATCC 35316] Length = 342 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 102/274 (37%), Positives = 154/274 (56%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ +Q + ++E P DP+ + N S + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLKQTLTSQDEFVTAPGYSTDPLEEQN-SVVPGLLHKYLNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYADNQG---NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L+ L ++ V + H NH E +E AA+ R Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDGLVSRLAQSRLQVLLVNHINHANEIDDEFRAAMIR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+G+ND+ +LA+L + + PYYLH D G +HF +T EE Sbjct: 243 LRQAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVTDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++IV L +SG P ++ G K +D Sbjct: 303 ARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLD 336 >gi|257455683|ref|ZP_05620912.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60] gi|257446966|gb|EEV21980.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60] Length = 333 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 2/274 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 NDP+ +Q +P +E + DP+ + + +P+KGI+H+Y R+L+ + C V CR+C Sbjct: 61 NDPLLKQVLPTFQETVQVTGFVTDPLDEQHANPVKGIIHKYASRVLIPVTGACVVNCRYC 120 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FR+ + + D +A AYI + EVI +GGDPL LS++RL ++ TL + Sbjct: 121 FRQHF--DYHENLPTHNDWQAISAYITAHPAVNEVILSGGDPLSLSNRRLLEIFTTLEAL 178 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 V +R H+RVP++ P+R++ L+ + + + IHANHP E +E + + Sbjct: 179 PQVHTIRIHTRVPVMIPERLDEPLLARFANSRCHIVMVIHANHPNEIDQETQIFLGKAKK 238 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AG+ LL+Q+VLLK INDD LA+L + + PYYLH D AG SHF ++ E+ Sbjct: 239 AGVTLLNQTVLLKSINDDANTLASLNEKLWQAGVLPYYLHVLDKVAGASHFYISDEQAVA 298 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 + L K +G P + +LP K +D +N Sbjct: 299 LYWELLAKCAGYLVPKLVRELPNKPFKTPVDLYN 332 >gi|212211887|ref|YP_002302823.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212] gi|212010297|gb|ACJ17678.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212] Length = 342 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + +++ +L+N + + + +++++++ + + NPNDP+ Q +PQ Sbjct: 12 RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQILPQAH 71 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Q Sbjct: 72 ELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQNTP- 130 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 Y++ S I EVI +GGDPL++ + L + ++ I ++ LR H+R+P Sbjct: 131 -GRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIHTRLP 189 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 IV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+QSVLLK Sbjct: 190 IVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQSVLLK 249 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + + G Sbjct: 250 NVNDDSKALIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMKHLPGYL 309 Query: 306 QPFYILDLPGGYGKVKI 322 P ++ ++PG K + Sbjct: 310 VPKFVREIPGALSKTPL 326 >gi|320539691|ref|ZP_08039355.1| putative lysine aminomutase [Serratia symbiotica str. Tucson] gi|320030303|gb|EFW12318.1| putative lysine aminomutase [Serratia symbiotica str. Tucson] Length = 342 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 167/306 (54%), Gaps = 5/306 (1%) Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83 ++ + ++ +++ + A + P + NDP+ RQ + KEE P DP+ D Sbjct: 40 ELSQGRDARRLFALRVPRAFAARMRPGDANDPLLRQVLTAKEEFINAPGFTTDPL-DEQR 98 Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKS 142 S + G++H+Y +R LL + C + CR+CFRR +G + + AL YI++ Sbjct: 99 SVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHP 155 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+V P RI PEL + L Sbjct: 156 ELDEIIFSGGDPLMAKDHELGWLIGELAAIPHLKRLRIHTRLPVVIPARITPELCRWLSA 215 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 + V + H NH E E AA+++L AG+ LL+QSVL++ INDD + LA L Sbjct: 216 SRLQVLMITHINHANEIDRELQAAMAQLRLAGVTLLNQSVLMRRINDDADTLAALSNALF 275 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + I PYY+H D G +HF ++ +E + I+ +L K+SG P ++ G K + Sbjct: 276 DAGILPYYIHMLDKVQGATHFMVSDDEARTIMQALLSKVSGYLVPRLTREVGGKPSKTPL 335 Query: 323 DTHNIK 328 D H I+ Sbjct: 336 DLHLIQ 341 >gi|146309997|ref|YP_001175071.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638] gi|145316873|gb|ABP59020.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638] Length = 342 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 103/306 (33%), Positives = 163/306 (53%), Gaps = 3/306 (0%) Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77 N+ E + +E +++ + + NPNDP+ +Q + K+E P DP Sbjct: 34 NIDSDENMLAGREAKRLFALRVPRAFVARMEKGNPNDPLLKQVLTSKDEFVTAPGFSTDP 93 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 + + N S + G++H+Y +R LL + C V CR+CFRR ++ + ++ + AL Y Sbjct: 94 LEEQN-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENPG--NKRNWQVALDY 150 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197 I ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PIV P RI L+ Sbjct: 151 IAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDGLV 210 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 + + + H NH E E +A+ RL NAG+ LL+QSVLL+G+ND+ + LA+L Sbjct: 211 SRFAASPLQILLVNHINHANEIDETFRSAMMRLRNAGVTLLNQSVLLRGVNDNAQTLADL 270 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 + + PYYLH D G +HF ++ EE ++IV L +SG P ++ G Sbjct: 271 SNALFDASVMPYYLHVLDRVQGAAHFMVSDEEARQIVRELLTLVSGYMVPKLAREIGGEP 330 Query: 318 GKVKID 323 K +D Sbjct: 331 SKTPLD 336 >gi|168467049|ref|ZP_02700897.1| KamA family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630645|gb|EDX49257.1| KamA family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 342 Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHVGVTLLNQSVLLRGVNDNALTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|253690127|ref|YP_003019317.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756705|gb|ACT14781.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 351 Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 156/290 (53%), Gaps = 5/290 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A + NP+DP+ Q + +EE P DP+ D HS + G++H+Y Sbjct: 51 FALRVPRAFAARMQKGNPDDPLLLQVLTAREEFTATPGFTHDPL-DEQHSVVPGLLHKYH 109 Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 +R LL + C V CR+CFRR +G + + AL YI++ ++ E+IF+GGD Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEIIFSGGD 166 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+ L ++ L +I H++ LR HSR+P+V P RI L L + V + H Sbjct: 167 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 226 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E + A++RL AG+ LL+QSVLL+G+ND + LA L + I PYYLH Sbjct: 227 NHPQEIDTDLTQAMARLRRAGVTLLNQSVLLRGVNDSADTLAQLSNALFDAGILPYYLHV 286 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D G +HF + E + +V +L +K+SG P ++ G K +D Sbjct: 287 LDKVQGAAHFLVDDNEARILVKALLKKVSGYLVPRLAREIGGEASKTPLD 336 >gi|15606739|ref|NP_214119.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5] gi|4033496|sp|O67554|Y1632_AQUAE RecName: Full=Uncharacterized KamA family protein aq_1632 gi|2983974|gb|AAC07521.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5] Length = 374 Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 100/282 (35%), Positives = 159/282 (56%), Gaps = 10/282 (3%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 +++ ++ +LIN NPNDPI R IP EEL + + D ++ + + G+ Sbjct: 27 KVTEKFAFRTNTYYNSLINWDNPNDPIRRIVIPTTEELEVWG--KLDASNESKYMKVHGL 84 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 H+YPD LL + VC +YCRFCFR+ + + V ++D L YI+ +I V+ Sbjct: 85 EHKYPDTALLLVTDVCGIYCRFCFRKRLFMNDNDEV--ARDVSEGLEYIRNHPEINNVLL 142 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK----EA 203 TGGDPLIL+ +L+K+LK L I HV+I+R S++ V+P R+ +P+L++ + E Sbjct: 143 TGGDPLILATFKLEKILKALAEIPHVRIVRIGSKMLAVNPFRVLDDPKLLELFEWFNTET 202 Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 GK +Y+ H NHP E ++EA A+ + G L +Q+ +LKGINDD E L L+ Sbjct: 203 GKKLYLMNHFNHPRELTKEARKAVELVQKTGTTLTNQTPILKGINDDFETLKTLLEELSF 262 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 + + PYY+ AG + IEE +V +++ ++SGL Sbjct: 263 IGVPPYYVFQCRPTAGNKAYSTPIEETIDLVEAVRAEVSGLA 304 >gi|238912798|ref|ZP_04656635.1| KamA family protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 342 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|157368658|ref|YP_001476647.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans 568] gi|157320422|gb|ABV39519.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans 568] Length = 342 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 103/280 (36%), Positives = 156/280 (55%), Gaps = 5/280 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P + NDP+ RQ + EE P DP+ D S + G++H+Y +R LL + C Sbjct: 63 MQPGDANDPLLRQVLTASEEFINAPGFTTDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 121 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L + Sbjct: 122 VNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWL 178 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 + L I+H++ LR H+R+P+V P RI PEL + L + V + H NH E E A Sbjct: 179 IGELEAIEHLKRLRIHTRLPVVIPARITPELCRRLSASRLQVLMVTHINHANEIDRELQA 238 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 ++++L AG+ LL+QSVLL+GINDD + LA L + I PYY+H D G +HF + Sbjct: 239 SMAQLRLAGVTLLNQSVLLRGINDDADTLAALSNALFDAGILPYYIHVLDKVQGAAHFMV 298 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + +E + I+ +L KISG P ++ G K +D H Sbjct: 299 SDDEARTIMQALLGKISGYMVPRLTREVGGKPSKTPLDLH 338 >gi|16767582|ref|NP_463197.1| aminomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994785|ref|ZP_02575876.1| KamA family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168244887|ref|ZP_02669819.1| KamA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194447368|ref|YP_002048381.1| KamA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197248033|ref|YP_002149252.1| KamA family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263424|ref|ZP_03163498.1| KamA family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16422895|gb|AAL23156.1| putative aminomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194405672|gb|ACF65891.1| KamA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197211736|gb|ACH49133.1| KamA family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241679|gb|EDY24299.1| KamA family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205327405|gb|EDZ14169.1| KamA family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205336322|gb|EDZ23086.1| KamA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261249429|emb|CBG27293.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996666|gb|ACY91551.1| putative aminomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160825|emb|CBW20356.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915434|dbj|BAJ39408.1| KamA family protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223208|gb|EFX48278.1| Lysine 2,3-aminomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132674|gb|ADX20104.1| putative aminomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332991147|gb|AEF10130.1| putative aminomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 342 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 IKHV+ LR HSR+PIV P RI EL+ ++ + + H NH E E A+ +L Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + G+ LL+QSVLL+G+ND+ LANL + + PYYLH D G +HF +T +E Sbjct: 244 RHVGVTLLNQSVLLRGVNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 336 >gi|2754809|gb|AAC04238.1| 37.5 kDa protein [Buchnera aphidicola (Myzus persicae)] Length = 337 Score = 182 bits (462), Expect = 6e-44, Method: Compositional matrix adjust. Identities = 99/263 (37%), Positives = 149/263 (56%), Gaps = 2/263 (0%) Query: 50 HNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 ++P DP+ Q I E P+ +DPI + H L G++H+Y DR+LL + C ++C Sbjct: 66 NDPQDPLLLQVIINNREFLNSPKYVKDPIKEKKHIILPGLLHKYKDRVLLFVKTNCAIHC 125 Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 R+CFR+ + S + +L YIQ+ + EVIF+GGDPLI L ++ +L Sbjct: 126 RYCFRKYFPYEKNQG--SKINWIKSLEYIQKNKNLNEVIFSGGDPLIAKDHELLWLITSL 183 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR H+R+PIV P RI L + ++ + I H NHP E ++ ++ + Sbjct: 184 SKINHIKRLRIHTRLPIVIPNRITSNLCEIFIQSSLKIIIVTHINHPQEINKNLSNSLLK 243 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L +G+I+L+QSVLLK INDDP ILA L + I PYYLH D GT HF ++ ++ Sbjct: 244 LKESGVIMLNQSVLLKNINDDPIILAELSNLLCDNNILPYYLHILDTVKGTMHFSVSSKK 303 Query: 290 GQKIVASLKEKISGLCQPFYILD 312 + I+ SL + ISG P + D Sbjct: 304 AKSIMKSLIKMISGYLIPRLVQD 326 >gi|270264978|ref|ZP_06193241.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13] gi|270040912|gb|EFA14013.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13] Length = 342 Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 103/298 (34%), Positives = 162/298 (54%), Gaps = 5/298 (1%) Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88 +E +++ + A + P + NDP+ RQ + EE P DP+ D S + G Sbjct: 45 REARRLFALRVPRAFAARMRPGDANDPLLRQVLTASEEFINAPGFTTDPL-DEQRSVVPG 103 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 ++H+Y +R LL + C V CR+CFRR +G + + AL YI++ ++ E+ Sbjct: 104 LLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEI 160 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 IF+GGDPL+ L ++ L I H++ LR H+R+P+V P RI PEL + L + V Sbjct: 161 IFSGGDPLMAKDHELDWLIGELEAIAHLKRLRIHTRLPVVIPARITPELCRRLSASRLQV 220 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 + H NH E E A++++L AG+ LL+QSVLL+GIND+ + LA L + I Sbjct: 221 LMVTHINHANEIDRELQASMAQLRLAGVTLLNQSVLLRGINDNADTLAALSNALFDAGIL 280 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 PYY+H D G +HF ++ +E + I+ +L K+SG P ++ G K +D H Sbjct: 281 PYYIHVLDKVQGAAHFMVSDDEARAIMQALLSKVSGYMVPRLTREVGGKPSKTPLDLH 338 >gi|312882797|ref|ZP_07742531.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122] gi|309369581|gb|EFP97099.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122] Length = 340 Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust. Identities = 98/276 (35%), Positives = 156/276 (56%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ +P +E NI PE DP+ + ++ + G++H+Y +R+L+ + C + CR Sbjct: 67 NPNDPLLRQVLPLIDEFNIHPEYSSDPLEEQSNE-IPGLLHKYHNRVLMIVKGGCAINCR 125 Query: 111 FCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR S+ KGT + +L YI +I EVI +GGDPL+ L+ + + Sbjct: 126 YCFRRHFPYSENKGT---KSVWQQSLRYISLHKEIDEVILSGGDPLMAKDDELRWLFSEI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I HV+ LR HSR+P+V P RI ELI+ ++ + H NH E + E A+ + Sbjct: 183 AKISHVKRLRIHSRLPVVIPARITSELIELIENNRLTTILVTHVNHANEINIELKQALQK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L A + LL+Q V+LKG+ND+ + L +T + + PYY+H D G +HF ++ + Sbjct: 243 LKAANVTLLNQGVMLKGVNDNADAQVQLSQTLFDAGVMPYYMHVLDKVQGATHFFISDQR 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 AREIMAELIERVSGYLVPKLTREVGGRKSKTPLDLH 338 >gi|29655147|ref|NP_820839.1| radical SAM domain-containing protein [Coxiella burnetii RSA 493] gi|161831507|ref|YP_001597682.1| KamA family protein [Coxiella burnetii RSA 331] gi|29542416|gb|AAO91353.1| lysine 2,3-aminomutase [Coxiella burnetii RSA 493] gi|161763374|gb|ABX79016.1| KamA family protein [Coxiella burnetii RSA 331] Length = 342 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 94/317 (29%), Positives = 166/317 (52%), Gaps = 2/317 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + +++ +L+N + + + +++++++ + + NPNDP+ Q +PQ Sbjct: 12 RAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQILPQAH 71 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Q Sbjct: 72 ELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPYEQNTP- 130 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 Y++ S I EVI +GGDPL++ + L + ++ I ++ LR H+R+P Sbjct: 131 -GRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLRIHTRLP 189 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 IV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+QSVLLK Sbjct: 190 IVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLNQSVLLK 249 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + + G Sbjct: 250 NVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMIKHLPGYL 309 Query: 306 QPFYILDLPGGYGKVKI 322 P ++ ++PG K + Sbjct: 310 VPKFVREIPGALSKTPL 326 >gi|320537569|ref|ZP_08037507.1| KamA family protein [Treponema phagedenis F0421] gi|320145571|gb|EFW37249.1| KamA family protein [Treponema phagedenis F0421] Length = 342 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 104/298 (34%), Positives = 158/298 (53%), Gaps = 7/298 (2%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 + RQ + E LP E DP+G++ + +VH+Y +R+L+ C YCR+CFRR Sbjct: 46 LRRQVFAAETEKISLPYESADPLGESRYCVTPFLVHQYTNRVLMLTSGRCLSYCRYCFRR 105 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 ++G + + E Y+++ I E++ +GGDP+ + +L+ +LK LR Sbjct: 106 GFTARRQGWI-PDTEIEKITDYLKQNPDIKEILVSGGDPMSGTLGQLEALLKRLRQTSPE 164 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235 ++R +R PI P+ EL+Q LK KP++I H NHP E E AI NAG+ Sbjct: 165 LLIRLCTRAPIFAPELFTEELLQLLKSM-KPLWIIPHINHPAELGFEQKKAIDSCINAGL 223 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 + SQSVLL+G+N+ E L L T V + +KP YL DLA GT+ FR+ + + I Sbjct: 224 PMQSQSVLLRGVNNSVETLCALFHTLVCMGVKPGYLFQMDLAPGTAEFRVPLSQALGIWR 283 Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHN-----IKKVGNGSYCITDHHNIVHDYP 348 L++K+SGL P + +DLPGG GK + +KK S+ V+ YP Sbjct: 284 ELRKKLSGLSLPQFAVDLPGGGGKFPLSILALYDTIVKKDDADSFSALGLDGKVYTYP 341 >gi|21231711|ref|NP_637628.1| hypothetical protein XCC2273 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768163|ref|YP_242925.1| hypothetical protein XC_1842 [Xanthomonas campestris pv. campestris str. 8004] gi|188991300|ref|YP_001903310.1| Putative radical SAM superfamily protein [Xanthomonas campestris pv. campestris str. B100] gi|21113412|gb|AAM41552.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573495|gb|AAY48905.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733060|emb|CAP51258.1| Putative radical SAM superfamily protein [Xanthomonas campestris pv. campestris] Length = 342 Score = 182 bits (461), Expect = 8e-44, Method: Compositional matrix adjust. Identities = 97/291 (33%), Positives = 153/291 (52%), Gaps = 2/291 (0%) Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88 ++ + +++ + + P + DP+ RQ +P E+ ++P D +GD G Sbjct: 51 EDAAAQFAVRVPRSFVARMRPGDLTDPLLRQVLPLDAEMRVVPGFALDAVGDGAARTTTG 110 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 ++ +Y R LL C V+CR+CFRR +++ + A+A I I EV+ Sbjct: 111 VIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEETA--ARDGWREAVAAIAADPDIDEVL 168 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 +GGDPL L+ +L ++ L I H++ LR HSR+P+V P+R++ L+ L+ PV Sbjct: 169 LSGGDPLSLTTPKLAELTDALAAIPHLKRLRIHSRLPVVLPERVDAPLLAWLRSLPWPVA 228 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 IHANH EF E AA+ L AG LL+Q+VLL+G+ND + LA L + P Sbjct: 229 FVIHANHANEFDAEVDAALHALRGAGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLP 288 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 YYLH D AG +HF + + + A L ++SG P + ++PG GK Sbjct: 289 YYLHQLDRVAGVAHFEVDDARARALHAELATRLSGYLVPRLVREIPGDTGK 339 >gi|88812696|ref|ZP_01127943.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231] gi|88790112|gb|EAR21232.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231] Length = 339 Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust. Identities = 92/269 (34%), Positives = 150/269 (55%), Gaps = 2/269 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 N DP+ RQ +P EL+ P DP+GD S G++H+Y R+LL C + CR Sbjct: 68 NLEDPLLRQVLPLTAELDPAPGFVTDPVGDLGASKGAGVLHKYHGRVLLITTGACAINCR 127 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR +Q ++ +AL YI +++++ EVI +GGDPL L+ +RL +++ L Sbjct: 128 YCFRRHFPYAQANA--AAGQWHSALRYIAQRTEVEEVILSGGDPLTLADRRLAQLVTQLV 185 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR H+R+P+V P R+ EL++ + + +H NH E +A+ RL Sbjct: 186 DIPHIRRLRIHTRLPVVLPARVTDELVEWFAGSRLQPIMVLHTNHANELDATVTSAVKRL 245 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ +L+Q+VLL+G+ND+ L L + + I PYYLH D AG HF +T + Sbjct: 246 REAGVTMLNQTVLLRGVNDEAMALTALHQRLFDSGILPYYLHLLDRVAGARHFAITQDRA 305 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319 +++ + ++ G P + ++ G GK Sbjct: 306 RELHRQMARRLPGYLVPRLVQEIEGAPGK 334 >gi|77919981|ref|YP_357796.1| hypothetical protein Pcar_2387 [Pelobacter carbinolicus DSM 2380] gi|77546064|gb|ABA89626.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380] Length = 376 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 98/306 (32%), Positives = 169/306 (55%), Gaps = 9/306 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K +T+ + N +++ ++K + Y+ +LI+ ++P DPI R IP + Sbjct: 5 KYITNIDQIPELNRLEEHHRQKLKAVQKRYAFRSNGYYQSLIDWNDPKDPIRRIVIPSAD 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P D G++ +S G+ H+YPD +L + VC CRFCFR+ + V Sbjct: 65 ELQ--PWGELDASGESLYSKAPGLEHKYPDTAVLLVSDVCGALCRFCFRKRLFMDDNQEV 122 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 ++D A LAYI++ ++I V+ TGGDPL+LS ++L ++++ LR I+HV+I+R S++P Sbjct: 123 --ARDVSAGLAYIRKHTEINNVLVTGGDPLLLSTRKLTEIIEQLRAIEHVRIIRIGSKMP 180 Query: 186 IVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +P RI +PEL++ K +P +Y+ NHP E + EA A+ + +G+ ++ Q Sbjct: 181 AFNPFRILDDPELLEMFKAHSQPNRRIYLMAQFNHPRELTSEARRALDLVLQSGVTVMHQ 240 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 + +++G+ND E+L L + + PYY+ G + + + IEEG I A + Sbjct: 241 TPMIRGVNDSAEVLTELFNELSYMGVAPYYVFQCRPTEGNAAYTVPIEEGYAIFAKAHQN 300 Query: 301 ISGLCQ 306 SGL + Sbjct: 301 CSGLAR 306 >gi|268323521|emb|CBH37109.1| conserved hypothetical protein [uncultured archaeon] Length = 366 Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/301 (33%), Positives = 174/301 (57%), Gaps = 11/301 (3%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 E +++EI + + +T +LI+ ++PNDPI R +P +EELN+L D G+ Sbjct: 26 EMEQQLQEIVAIHPMRITQYYMSLIDKNDPNDPIRRMTVPSEEELNLLGSY--DTSGERE 83 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 ++ + G+ H+Y L+ + C YCR+CFR+ +VG +L + A+ YI+ Sbjct: 84 NTMMPGLQHKYAQTALILATNRCATYCRYCFRKRLVGLPTEEILQRFND--AVKYIENHE 141 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL 200 +I V+ +GGDP +LS +++ L+ L I H+ +RF +RVP+ P RI + EL+ L Sbjct: 142 EINNVLISGGDPFVLSTGVVKEFLEKLSTISHLDFIRFGTRVPVTFPDRIIEDDELLTLL 201 Query: 201 K---EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 + + + +Y+ NHP E +++A A+SRL +G+IL +Q+VLLKG+NDDPE LA L Sbjct: 202 EKNSQENRRIYVVTQFNHPREITQKATDAVSRLIRSGVILDNQTVLLKGVNDDPETLAEL 261 Query: 258 MRTFVELRIKPYYLHHPD-LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPG 315 V + + PYY+ + ++F++ + +G +IV K+K++G + F YI+ Sbjct: 262 QNKLVSIGVNPYYVFQCRPVKRVKNNFQVPLYKGYEIVDRAKKKLNGHSKRFKYIMSHQT 321 Query: 316 G 316 G Sbjct: 322 G 322 >gi|260549729|ref|ZP_05823946.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624] gi|260407246|gb|EEX00722.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624] Length = 338 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 102/276 (36%), Positives = 148/276 (53%), Gaps = 2/276 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 +N NP DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C Sbjct: 59 MNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V+CR+CFRR + + + D YI+ I EVI +GGDPL LS+++L L Sbjct: 119 VHCRYCFRRHF--PYQENLPKNDDWLNIKNYIEANPDINEVILSGGDPLTLSNRKLALWL 176 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + + Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + L++ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L Sbjct: 237 LMELSSHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLM 296 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 E I + + G P + ++ G K + Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|120555694|ref|YP_960045.1| lysine 2,3-aminomutase YodO family protein [Marinobacter aquaeolei VT8] gi|120325543|gb|ABM19858.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8] Length = 355 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 98/278 (35%), Positives = 148/278 (53%), Gaps = 4/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I NP+DP+ RQ +P +E I P+ DP+ + + G++ +Y R LL + C Sbjct: 78 IEQGNPDDPLLRQVLPVAQEAEIHPDFVSDPLEEASAIQTTGLIRKYTSRALLMITGQCA 137 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 + CR+CFRR G + L +D + + +I EVIF+GGDPL ++ + L + Sbjct: 138 INCRYCFRRHFPYGDHR---LGPEDRRQVIDSLSASPEINEVIFSGGDPLAVNDRLLSQW 194 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 + L I H++ LR HSR+P+V PQR+ LI L + +H NHP E + Sbjct: 195 AELLGDIPHLRRLRIHSRLPVVIPQRVCDSLIDWLSRTRLQKVLVVHVNHPAEIDQATRQ 254 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 A RL+ AG+ LL+QSV+LKG+ND L+ L T E + PYYLH D +G HF + Sbjct: 255 AFRRLSEAGVTLLNQSVILKGVNDSSATLSALSETLFEAGVMPYYLHAFDPVSGARHFSV 314 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + + +IV + E + G P + +LPG K +D Sbjct: 315 SDTDAIRIVNEMLENLPGFLVPKLVRELPGRASKTPLD 352 >gi|190575198|ref|YP_001973043.1| putative methylase protein [Stenotrophomonas maltophilia K279a] gi|190013120|emb|CAQ46752.1| putative methylase protein [Stenotrophomonas maltophilia K279a] Length = 346 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 96/266 (36%), Positives = 144/266 (54%), Gaps = 4/266 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P DP+ RQ +P EE+ P D +GD G++ +Y R LL C + CR Sbjct: 77 DPADPLLRQVLPIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCR 136 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR G++ + + A+A I I EVI +GGDPL L+ +L ++ L Sbjct: 137 YCFRRHFDYGAENA---AKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDAL 193 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 R I H++ LR H+R+PIV P+R++ EL+ L P+ I +HANH EF AA++R Sbjct: 194 RAIPHIRRLRIHTRLPIVLPERVDDELVSWLGSLPWPLAIVVHANHANEFDASVDAAMAR 253 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G LL+Q+VLL+G+ND + L +L + PYYLH D G +HF + Sbjct: 254 LRGIGAQLLNQAVLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTR 313 Query: 290 GQKIVASLKEKISGLCQPFYILDLPG 315 + ++A L ++SG P + +LPG Sbjct: 314 AKALIAGLTARLSGYLVPKLVRELPG 339 >gi|292490713|ref|YP_003526152.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus halophilus Nc4] gi|291579308|gb|ADE13765.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus halophilus Nc4] Length = 336 Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 146/273 (53%), Gaps = 2/273 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +PNDP+ RQ P E I P DP+GD P G++ +Y R+LL C ++CR Sbjct: 65 DPNDPLFRQVFPLIAEDQISPGFSADPVGDLAAMPAPGVLQKYAGRVLLVTTGACAIHCR 124 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + S + AL YI + EVI +GGDPL L+ RL ++++ L Sbjct: 125 YCFRRHFPYADHNPAPSQ--WQQALQYIAQNPSTQEVILSGGDPLTLTDNRLTELVQALA 182 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I HV+ LR H+R+P+V P+R++ L+Q L+ + IHANH E + A+ L Sbjct: 183 AISHVKRLRIHTRLPVVLPERVDSHLLQWLEHTSLQKVVVIHANHANELDDRVGEALEGL 242 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + AG L +Q+VLL+GIND L +L + + + PYYLH D G +HF + Sbjct: 243 SRAGCRLFNQTVLLRGINDRVSALCDLSESLFDAGVIPYYLHLLDRVQGAAHFEVDTPTA 302 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 Q + +L+ ++ G P + +L G K+ ++ Sbjct: 303 QCLHRTLRARLPGYLVPLLVQELAGAPSKLPLE 335 >gi|157147882|ref|YP_001455201.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895] gi|157085087|gb|ABV14765.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895] Length = 342 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 98/274 (35%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ + ++E P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPNDPLLRQVLTSQDEFVTAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYADNQG---NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L + + + H NH E + A++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDGLAARFARSSLQILLVNHINHANEIDDTFRQAMTT 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L NAG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRNAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L ++SG P ++ G K +D Sbjct: 303 ARRIMRELLTRVSGYMVPRLAREIGGEPSKTPLD 336 >gi|295098305|emb|CBK87395.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 342 Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust. Identities = 100/274 (36%), Positives = 153/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ +Q + ++E P DP+ + N S + G++H+Y +R LL + C V CR Sbjct: 67 NPGDPLLKQTLTSQDEFITAPGYSTDPLEEQN-SVVPGLLHKYRNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L+ L+++ V + H NH E + AA++R Sbjct: 183 ETIPHIKRLRIHSRLPIVIPARITDALVTRLEQSRLQVLLVNHINHANEIDADFRAAMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 + AG+ LL+QSVLL+G+ND +LA+L + + PYYLH D G +HF +T EE Sbjct: 243 MRKAGVTLLNQSVLLRGVNDSARVLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVTDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +KI+ L +SG P ++ G K +D Sbjct: 303 ARKIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336 >gi|222099542|ref|YP_002534110.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359] gi|221571932|gb|ACM22744.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359] Length = 365 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 163/289 (56%), Gaps = 9/289 (3%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 E+ +++K + + LIN +P+DPI + IP+++EL D + + Sbjct: 18 EEKEKLKRVEERFRFRANSYYLGLINWSDPDDPIRKIIIPEEDELEEWGSL--DASSERS 75 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 ++ KG+ H+YPD L + VC +CRFCFR+ + + V+ +D L YI+ Sbjct: 76 YTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVGAEVI--RDITPQLDYIRSHK 133 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL 200 +I V+ TGGDPL+LS ++L+K++ +LR I HV I+R S++P +P RI +PEL++ + Sbjct: 134 EITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVHIIRIGSKIPAFNPYRIIDDPELLRMI 193 Query: 201 KEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 ++ K +Y+ NH E +EEAI A++ L +AG +L +Q+ LL+GIND PE L L Sbjct: 194 RKYSTKEKKIYVMTQFNHSKELTEEAIEAVNLLKDAGAVLCNQTPLLRGINDSPETLGEL 253 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 + + + PYY+ +G F + IE+G +I +SG+ + Sbjct: 254 LDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEKGYEIFTKAISNLSGVAK 302 >gi|293417652|ref|ZP_06660274.1| kamA family protein yjeK [Escherichia coli B185] gi|291430370|gb|EFF03368.1| kamA family protein yjeK [Escherichia coli B185] Length = 342 Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 98/274 (35%), Positives = 153/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ I ++E I P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVITSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|227113817|ref|ZP_03827473.1| hypothetical protein PcarbP_12668 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 335 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/290 (34%), Positives = 157/290 (54%), Gaps = 5/290 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A + NP+DP+ Q + +EE P DP+ D HS + G++H+Y Sbjct: 36 FALRVPRAFAARMQKGNPDDPLLLQVLTAREEFIATPGFTHDPL-DEQHSVVPGLLHKYH 94 Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 +R LL + C V CR+CFRR +G + + AL YI++ ++ E+IF+GGD Sbjct: 95 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEIIFSGGD 151 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+ L ++ L +I H++ LR HSR+P+V P RI L L + V + H Sbjct: 152 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 211 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E + +++RL AG+ LL+QSVLL+G+ND+ E LA L + I PYYLH Sbjct: 212 NHPQEIDPDLTQSMARLRRAGVTLLNQSVLLRGVNDNAETLARLSNALFDAGILPYYLHV 271 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D G +HF + E + +V +L +K+SG P ++ G K +D Sbjct: 272 LDKVQGAAHFLVDDNEARILVKALLKKVSGYLVPRLAREIGGEASKTPLD 321 >gi|260599504|ref|YP_003212075.1| kamA family protein YjeK [Cronobacter turicensis z3032] gi|260218681|emb|CBA34029.1| Uncharacterized kamA family protein yjeK [Cronobacter turicensis z3032] Length = 342 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 101/307 (32%), Positives = 165/307 (53%), Gaps = 5/307 (1%) Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77 N+ E++ ++ +++ + A + NP DP+ RQ + +EE P DP Sbjct: 34 NIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTSREEFVAAPGFTTDP 93 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALA 136 + + N S + G++H+Y +R LL + C V CR+CFRR +G + ++ +AAL Sbjct: 94 LEEQN-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG---NKRNWQAALD 149 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196 YI +++ E+IF+GGDPL+ L+ ++ + I H++ LR HSR+PIV P RI L Sbjct: 150 YIAAHAELDEIIFSGGDPLMAKDHELEWLVANIEAIPHIKRLRIHSRLPIVIPARITDAL 209 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 ++ L E V + H NH E + A +++L AG+ LL+QSVLLKG+ND+ L Sbjct: 210 VRLLGETRLQVLLVNHINHAQEIDDAFRAGMTKLRAAGVTLLNQSVLLKGVNDNAATLTA 269 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L + + PYYLH D G +HF ++ +E + I+ L ++SG P ++ G Sbjct: 270 LSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSQVSGYLVPKLAREIGGE 329 Query: 317 YGKVKID 323 K +D Sbjct: 330 PSKTPLD 336 >gi|242280374|ref|YP_002992503.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio salexigens DSM 2638] gi|242123268|gb|ACS80964.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio salexigens DSM 2638] Length = 353 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 106/283 (37%), Positives = 154/283 (54%), Gaps = 20/283 (7%) Query: 38 ALTPVIANLINPHNPNDPIARQFIPQKEELN---------ILPEEREDPIGDNNHSPLKG 88 TP +A+L++ +PN PI Q IP +E + E R D Sbjct: 40 GTTPHMASLMDKDDPNCPIRMQAIPSLKETKNEFGLDNYLVWKENR-----DTEEKRPDC 94 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 I +Y DRI + +C YCR CFR+E+V + + D E + +I+E +I +V+ Sbjct: 95 IARQYVDRIAFTVTDICANYCRHCFRKELVVDKNLEL--RFDLEEGIDWIREHEEIRDVL 152 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL-KEAGKPV 207 TGGDPL+LS R+ +LK+LR I HV+++RF SRVPI PQRI PEL++ L + PV Sbjct: 153 VTGGDPLLLSDDRIDHLLKSLRSIDHVEMIRFGSRVPIAMPQRITPELLEVLGGDHEVPV 212 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 ++ NHP E + A+ L AG+ + +Q VLLKGINDD E +L + ++ RI+ Sbjct: 213 WLNTQCNHPKELTPRTRKAVYDLLTAGVNVGNQMVLLKGINDDVETFRHLHQKLLQYRIR 272 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 PYY+ + + A G HFR E I L+ +GL QP Y+ Sbjct: 273 PYYVFYCEPAPGIDHFRTRAE---LIRDGLRGHTTGLAQPMYV 312 >gi|119475089|ref|ZP_01615442.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143] gi|119451292|gb|EAW32525.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143] Length = 343 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 97/313 (30%), Positives = 169/313 (53%), Gaps = 2/313 (0%) Query: 12 QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILP 71 ++L+N + K ++ + + + + + + + + +DP+ +Q +P +EL++ P Sbjct: 33 EELFNLLELDKSKLPDALRGCDDFPLQVPRAFVDRMVKGDWSDPLLQQILPLGQELDLHP 92 Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 DP+ + + +P+ G++H+Y R+LL + C + CR+CFRR + S ++ Sbjct: 93 GFSNDPLLELSDNPIPGLIHKYHGRVLLIVSGGCAINCRYCFRRHFPYQENNP--SQREW 150 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 + AL YI++ + I EVI +GGDPL + L+ + + I HV+ILR HSR+P+V PQR Sbjct: 151 QQALDYIRQDNSIKEVILSGGDPLAANDNMLRDLTTRIADIPHVEILRVHSRMPVVIPQR 210 Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 I + L + IH+NHP E I A+ L G+ LL+Q+VLL GIND+P Sbjct: 211 ITSPSMNWLTNTRLTPVMVIHSNHPNEIDHHVIEALQTLKREGVTLLNQTVLLAGINDNP 270 Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 E L L + + PYYLH D +G +HF +T ++++ L+ ++ G P + Sbjct: 271 EALLALSKRLFAAGVLPYYLHMLDKVSGAAHFEVTERRAKELITILRNQLPGYLIPKLVR 330 Query: 312 DLPGGYGKVKIDT 324 + G K+ I+ Sbjct: 331 EQSGELSKMPINN 343 >gi|88798858|ref|ZP_01114440.1| radical SAM domain protein [Reinekea sp. MED297] gi|88778338|gb|EAR09531.1| radical SAM domain protein [Reinekea sp. MED297] Length = 346 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 95/288 (32%), Positives = 155/288 (53%), Gaps = 2/288 (0%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 + + +T +A+L+ NP DP+ Q IP+ +E P + DP+ + ++ + G++H+Y Sbjct: 59 FRMRITRHLASLMEKGNPFDPLLLQLIPRLDETTEQPGYQTDPLMEEDYQVIPGLIHKYQ 118 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 +R+L+ C ++CR+CFRR S+ LS +A YIQ S I EVIF+GGDP Sbjct: 119 NRVLIIAHQACAIHCRYCFRRHFPYSEAR--LSESSLDAIEQYIQSHSDIDEVIFSGGDP 176 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L L+ + L +++ + +Q +R H+R P+ P+RI L+ L V + +H N Sbjct: 177 LSLADEALSNLIQRFDRLPQIQTVRLHTRTPVAAPERITETLLNTLNNLSCQVVMVVHIN 236 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 HP E + +A RL + + LL+QSVLL+GIND + L + + PYYLH Sbjct: 237 HPNELHPDLLAKFLRLRDINVTLLNQSVLLRGINDCSKTQIRLCKQLFAHGVLPYYLHSL 296 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 D GTSHF + + +I ++ +SG P + ++P + K I Sbjct: 297 DPVQGTSHFDVNQQTAGQIWLEMQAGLSGYLLPRLVREIPQRHSKTWI 344 >gi|311281298|ref|YP_003943529.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae SCF1] gi|308750493|gb|ADO50245.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae SCF1] Length = 342 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 98/273 (35%), Positives = 151/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ +Q I ++E P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPNDPLLKQVITSQDEFVAAPGFSTDPL-EEQHSVVPGLLHKYLNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + ALAYI ++ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYAENQG--NKRNWQVALAYIAAHPELDEIIFSGGDPLMAKDHELDWLISELE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+P+V P RI L + + + + H NH E ++ AA+ L Sbjct: 184 AIPHIKRLRIHSRLPVVIPARITGALAERFARSSLQILLVNHINHAQEIDDDFRAAMKTL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 244 RQAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + IV L ISG P ++ G K +D Sbjct: 304 RTIVRELLTLISGYMVPKLAREIGGEPSKTPLD 336 >gi|169632907|ref|YP_001706643.1| hypothetical protein ABSDF1142 [Acinetobacter baumannii SDF] gi|169151699|emb|CAP00492.1| conserved hypothetical protein [Acinetobacter baumannii] Length = 338 Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 102/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 +N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C Sbjct: 59 MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 176 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + + Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L+ I +L+Q+VLLKG+ND + L +L E RI PYYLH D G HF L Sbjct: 237 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARIMPYYLHVLDKVKGAQHFDLI 296 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 E I + + G P + ++ G K + Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|300920832|ref|ZP_07137231.1| KamA family protein [Escherichia coli MS 115-1] gi|300412197|gb|EFJ95507.1| KamA family protein [Escherichia coli MS 115-1] Length = 342 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 97/274 (35%), Positives = 153/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E I P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|262372891|ref|ZP_06066170.1| lysine 2,3-aminomutase [Acinetobacter junii SH205] gi|262312916|gb|EEY94001.1| lysine 2,3-aminomutase [Acinetobacter junii SH205] Length = 338 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 99/270 (36%), Positives = 147/270 (54%), Gaps = 2/270 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P DP+ Q +P EL PE DP+G+ + + G++H+Y R LL L C ++CR Sbjct: 63 DPFDPLLLQVLPHHLELEDHPEFVTDPLGEEAANQMAGVLHKYQSRFLLTLTGACAIHCR 122 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + D YI++ QI EVI +GGDPL LS+++L L+ L Sbjct: 123 YCFRRHF--PYQENLPKNDDWINIKQYIEQNPQINEVILSGGDPLTLSNRKLSLWLERLA 180 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 + ++ILR HSRVP+V P RI+ ELI LK + + + IH+NH E + + + +L Sbjct: 181 SLPQIKILRIHSRVPVVIPNRIDEELISILKNSRLRIVVVIHSNHAAELDDFTCSKLLQL 240 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + I +L+Q+VLLKG+ND EIL NL + R+ PYYLH D G HF L E Sbjct: 241 SEHHITVLNQAVLLKGVNDSAEILNNLSLRLFDARVMPYYLHVLDKVKGAQHFDLRSSEI 300 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320 I + + G P + ++ G K Sbjct: 301 DHIYTDVLASLPGYLVPKLVREIAGEKNKT 330 >gi|90416321|ref|ZP_01224253.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium HTCC2207] gi|90332046|gb|EAS47260.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium HTCC2207] Length = 341 Score = 180 bits (457), Expect = 2e-43, Method: Compositional matrix adjust. Identities = 98/317 (30%), Positives = 163/317 (51%), Gaps = 2/317 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + +TS L + + EQ+ ++ + +++ + + P NP DP+ Q +P Sbjct: 26 QAVTSIDQLLSCLDLTIEQLSTSQQAAAEFALKVPRPFIQRMQPGNPKDPLLLQVLPVAA 85 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E+ P+ +DP+ ++ H+P+ GIVH+Y +R+LL + C + CR+CFRR + Sbjct: 86 EMVPSPDYNQDPLEESKHNPIAGIVHKYANRLLLVISPACAINCRYCFRRHFPYDENRQ- 144 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 S + + AL YI+ I EVI++GGDPL + L + + I H++ LR H+R+P Sbjct: 145 -SKQQWQTALDYIRNDKSINEVIYSGGDPLAANDTFLSWLTSEIADIAHIKRLRIHTRLP 203 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P RI+ + + +H NH E ++ AI +L AG+ +L+QSVLL+ Sbjct: 204 VVIPARIDQGFLNWATATRLKPIVVLHINHANEIDDDVAEAIRKLTGAGMQVLNQSVLLR 263 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GIND LA+L + + PYYLH D AG HF L +++ L+ + G Sbjct: 264 GINDSAVTLADLSERLFDCGVTPYYLHLCDPVAGAQHFDLDETTAKQLYGQLQTLLPGFL 323 Query: 306 QPFYILDLPGGYGKVKI 322 P + ++P K I Sbjct: 324 VPKLVREIPDRESKTLI 340 >gi|194434729|ref|ZP_03066981.1| KamA family protein [Shigella dysenteriae 1012] gi|194417010|gb|EDX33127.1| KamA family protein [Shigella dysenteriae 1012] gi|320180662|gb|EFW55589.1| Lysine 2,3-aminomutase [Shigella boydii ATCC 9905] gi|332083146|gb|EGI88377.1| kamA family protein [Shigella boydii 5216-82] Length = 342 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E I P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITEALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 244 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|239501163|ref|ZP_04660473.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB900] Length = 338 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 +N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C Sbjct: 59 MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 176 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + + Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L Sbjct: 237 LLQLSGHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 296 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 E I + + G P + ++ G K + Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|82779418|ref|YP_405767.1| hypothetical protein SDY_4389 [Shigella dysenteriae Sd197] gi|81243566|gb|ABB64276.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 342 Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 97/274 (35%), Positives = 153/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E I P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|332083734|gb|EGI88952.1| kamA family protein [Shigella dysenteriae 155-74] Length = 301 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E I P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 26 NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 84 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 85 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 142 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L Sbjct: 143 AIPHIKRLRIHSRLPIVIPARITEALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 202 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 203 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 262 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 263 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 295 >gi|169795200|ref|YP_001712993.1| hypothetical protein ABAYE1057 [Acinetobacter baumannii AYE] gi|184158947|ref|YP_001847286.1| lysine 2,3-aminomutase [Acinetobacter baumannii ACICU] gi|213158137|ref|YP_002320188.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057] gi|215482748|ref|YP_002324946.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB307-0294] gi|301346998|ref|ZP_07227739.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB056] gi|301511118|ref|ZP_07236355.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB058] gi|301596429|ref|ZP_07241437.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB059] gi|332857081|ref|ZP_08436387.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150] gi|332870019|ref|ZP_08438995.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113] gi|332874730|ref|ZP_08442600.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059] gi|169148127|emb|CAM85990.1| conserved hypothetical protein [Acinetobacter baumannii AYE] gi|183210541|gb|ACC57939.1| Lysine 2,3-aminomutase [Acinetobacter baumannii ACICU] gi|193077935|gb|ABO12838.2| putative aminomutase [Acinetobacter baumannii ATCC 17978] gi|213057297|gb|ACJ42199.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057] gi|213987501|gb|ACJ57800.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB307-0294] gi|322508931|gb|ADX04385.1| lysine 2,3-aminomutase [Acinetobacter baumannii 1656-2] gi|323518917|gb|ADX93298.1| lysine 2,3-aminomutase [Acinetobacter baumannii TCDC-AB0715] gi|332726896|gb|EGJ58410.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150] gi|332732519|gb|EGJ63770.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113] gi|332736991|gb|EGJ67948.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059] Length = 338 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 +N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C Sbjct: 59 MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 176 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + + Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L Sbjct: 237 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 296 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 E I + + G P + ++ G K + Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|309787707|ref|ZP_07682318.1| kamA family protein [Shigella dysenteriae 1617] gi|308924457|gb|EFP69953.1| kamA family protein [Shigella dysenteriae 1617] Length = 320 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E I P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 45 NPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 103 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 104 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 161 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L Sbjct: 162 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 221 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 222 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 281 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 282 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 314 >gi|126642456|ref|YP_001085440.1| putative aminomutase [Acinetobacter baumannii ATCC 17978] Length = 280 Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust. Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 +N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C Sbjct: 1 MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 60 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L Sbjct: 61 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 118 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + + Sbjct: 119 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 178 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L Sbjct: 179 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 238 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 E I + + G P + ++ G K + Sbjct: 239 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 274 >gi|89256661|ref|YP_514023.1| hypothetical protein FTL_1362 [Francisella tularensis subsp. holarctica LVS] gi|115315075|ref|YP_763798.1| hypothetical protein FTH_1327 [Francisella tularensis subsp. holarctica OSU18] gi|156502809|ref|YP_001428874.1| hypothetical protein FTA_1443 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010527|ref|ZP_02275458.1| radical SAM domain protein [Francisella tularensis subsp. holarctica FSC200] gi|290953399|ref|ZP_06558020.1| hypothetical protein FtulhU_03333 [Francisella tularensis subsp. holarctica URFT1] gi|295313360|ref|ZP_06803969.1| hypothetical protein FtulhU_03323 [Francisella tularensis subsp. holarctica URFT1] gi|89144492|emb|CAJ79801.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica LVS] gi|115129974|gb|ABI83161.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|156253412|gb|ABU61918.1| lysine 2,3-aminomutase, YodO family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 328 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 158/296 (53%), Gaps = 4/296 (1%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++ Sbjct: 37 IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 96 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R+LL +C V+CR+CFR+E K + KD A YI I EVI + Sbjct: 97 HKYHGRVLLIAQTICAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E + Sbjct: 155 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 IH NHP E + + GII+L+QS LLK INDD +L L + ++ PYY Sbjct: 215 IHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 +H D +GT H+ ++ + I+ L E SG P ++PG K + H+ Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328 >gi|301023473|ref|ZP_07187251.1| KamA family protein [Escherichia coli MS 69-1] gi|300396989|gb|EFJ80527.1| KamA family protein [Escherichia coli MS 69-1] Length = 342 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 152/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|28899620|ref|NP_799225.1| hypothetical protein VP2846 [Vibrio parahaemolyticus RIMD 2210633] gi|260364033|ref|ZP_05776761.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030] gi|260876639|ref|ZP_05888994.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034] gi|260898079|ref|ZP_05906575.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466] gi|260902332|ref|ZP_05910727.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037] gi|28807872|dbj|BAC61109.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308085822|gb|EFO35517.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466] gi|308093973|gb|EFO43668.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034] gi|308110956|gb|EFO48496.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037] gi|308114570|gb|EFO52110.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030] Length = 340 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 95/275 (34%), Positives = 150/275 (54%), Gaps = 3/275 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P +E + DP+ D + + G++H+Y +R+L+ + C V CR Sbjct: 67 NPKDPLLRQVLPLSDEFEVHAGYSNDPL-DEQDNAIPGLLHKYKNRVLMIVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + + Y+ EK ++ EVIF+GGDPL+ + +L+ + Sbjct: 126 YCFRRHFPYQENKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+P+V P RI EL Q LK + + + H NH E ++E A+ +L Sbjct: 184 KIPHIKRLRIHSRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 A + LL+Q VLLKG+ND + L+ L + I PYYLH D G +HF + E Sbjct: 244 KEANVTLLNQGVLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++++A L E +SG P ++ G K +D H Sbjct: 304 RQLMAGLLENVSGYLIPTLTREIGGRKSKTPLDLH 338 >gi|300940634|ref|ZP_07155196.1| KamA family protein [Escherichia coli MS 21-1] gi|306815636|ref|ZP_07449785.1| putative lysine aminomutase [Escherichia coli NC101] gi|331650273|ref|ZP_08351345.1| putative radical SAM domain protein [Escherichia coli M605] gi|331671299|ref|ZP_08372097.1| putative radical SAM domain protein [Escherichia coli TA280] gi|281181244|dbj|BAI57574.1| conserved hypothetical protein [Escherichia coli SE15] gi|300454586|gb|EFK18079.1| KamA family protein [Escherichia coli MS 21-1] gi|305851298|gb|EFM51753.1| putative lysine aminomutase [Escherichia coli NC101] gi|330908490|gb|EGH37009.1| lysine 2,3-aminomutase [Escherichia coli AA86] gi|331040667|gb|EGI12825.1| putative radical SAM domain protein [Escherichia coli M605] gi|331071144|gb|EGI42501.1| putative radical SAM domain protein [Escherichia coli TA280] Length = 342 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 97/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|254525082|ref|ZP_05137137.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp. SKA14] gi|219722673|gb|EED41198.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp. SKA14] Length = 313 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 96/266 (36%), Positives = 144/266 (54%), Gaps = 4/266 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + DP+ RQ +P EE+ P D +GD G++ +Y R LL C + CR Sbjct: 44 DAADPLLRQVLPIDEEMRPAPGFSFDAVGDGAARKATGVIQKYRGRALLVATGSCAINCR 103 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR G++ + + A+A I I EVI +GGDPL L+ +L ++ L Sbjct: 104 YCFRRHFDYGAENA---AKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLVELTDAL 160 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 R I H++ LR HSR+PIV P+R++ EL+ L P+ I +HANH EF AA++R Sbjct: 161 RAIPHIRRLRIHSRLPIVLPERVDEELLAWLGSLPWPLAIVVHANHANEFDASVDAAMAR 220 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G LL+Q+VLL+G+ND + L +L + + PYYLH D G +HF + Sbjct: 221 LRGTGAQLLNQAVLLRGVNDSVQALQDLSERSFAVGVLPYYLHQLDRVEGVAHFEVDDAR 280 Query: 290 GQKIVASLKEKISGLCQPFYILDLPG 315 + ++A L ++SG P + +LPG Sbjct: 281 AKALIAGLTARLSGYLIPKLVRELPG 306 >gi|116753457|ref|YP_842575.1| lysine 2,3-aminomutase YodO family protein [Methanosaeta thermophila PT] gi|116664908|gb|ABK13935.1| L-lysine 2,3-aminomutase [Methanosaeta thermophila PT] Length = 392 Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 172/300 (57%), Gaps = 11/300 (3%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72 D+ + +K+++ ++ ++ +++ + +LI+ ++P DP+ + IP E+ Sbjct: 6 DIMDVMQLKEDERKDLSSVTENFAFRASSYYLSLIDWNDPQDPLRKIVIPDANEMYNWGT 65 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDT 131 + DP + +++ L G+ H+Y L+ + + C CRFCFR+ + + S T + D Sbjct: 66 K--DPSRERSYTVLPGLQHKYRQTALMLVSNACGSLCRFCFRKRIFIDSHHETAI---DL 120 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 AL YI+E +I V+ +GGDPL+LS +RL+++++ LR I HVQI+R +++P+ +P R Sbjct: 121 PRALDYIREHREITNVLLSGGDPLMLSTERLEEIVRRLRDIDHVQIIRIGTKLPVYNPFR 180 Query: 192 I--NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 I +P L++ +K + +Y I NHP E S E + A+S+L AG I +SQ+ LL+G Sbjct: 181 ITEDPSLLEIVKRYSHENRRIYFVIQFNHPKEISSETLKAVSQLQEAGAITVSQTPLLRG 240 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+PE LA L + + + PYY+ + G HF++ +E IV K SGL + Sbjct: 241 VNDNPETLAQLFKKLSFIGVSPYYVFQCRPSIGNYHFQVPVETSYAIVEKAKSMCSGLAK 300 >gi|218707761|ref|YP_002415280.1| putative lysine aminomutase [Escherichia coli UMN026] gi|293402777|ref|ZP_06646874.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412] gi|293407873|ref|ZP_06651713.1| kamA family protein yjeK [Escherichia coli B354] gi|298378306|ref|ZP_06988190.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302] gi|300899683|ref|ZP_07117911.1| KamA family protein [Escherichia coli MS 198-1] gi|331665813|ref|ZP_08366707.1| putative radical SAM domain protein [Escherichia coli TA143] gi|218434858|emb|CAR15796.1| putative lysine aminomutase [Escherichia coli UMN026] gi|284924332|emb|CBG37448.1| radical SAM superfamily protein [Escherichia coli 042] gi|291429692|gb|EFF02706.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412] gi|291472124|gb|EFF14606.1| kamA family protein yjeK [Escherichia coli B354] gi|298280640|gb|EFI22141.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302] gi|300356752|gb|EFJ72622.1| KamA family protein [Escherichia coli MS 198-1] gi|331056864|gb|EGI28858.1| putative radical SAM domain protein [Escherichia coli TA143] Length = 342 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 97/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVEHFSHSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|299769252|ref|YP_003731278.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1] gi|298699340|gb|ADI89905.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1] Length = 338 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 101/291 (34%), Positives = 152/291 (52%), Gaps = 2/291 (0%) Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91 S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++H Sbjct: 44 SEQFKLRVPRAFVGKMNAKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLH 103 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 +Y R LL L C V+CR+CFRR + + + D YI+ I E+I +G Sbjct: 104 KYKSRFLLTLTGACAVHCRYCFRRHF--PYQENLPKNDDWLNIKNYIEANPHINEIILSG 161 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 GDPL LS+++L L+ L +K ++ILR HSRVPIV P RI+ ELI LK + + + + Sbjct: 162 GDPLTLSNRKLALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIVLVV 221 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271 H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYL Sbjct: 222 HSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYL 281 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 H D G HF L E I + + G P + ++ G K + Sbjct: 282 HVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332 >gi|261823176|ref|YP_003261282.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae WPP163] gi|261607189|gb|ACX89675.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae WPP163] Length = 348 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 100/290 (34%), Positives = 156/290 (53%), Gaps = 5/290 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A + +P+DP+ Q + +EE P DP+ D HS + G++H+Y Sbjct: 51 FALRVPRAFAARMQKGDPDDPLLLQVLTAREEFIATPGFTHDPL-DEQHSVVPGLLHKYH 109 Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 +R LL + C V CR+CFRR +G + + AL YI++ ++ E+IF+GGD Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELNEIIFSGGD 166 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+ L ++ L +I H++ LR HSR+P+V P RI L L + V + H Sbjct: 167 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 226 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E + +++RL AG+ LL+QSVLL+G+ND E LA L + I PYYLH Sbjct: 227 NHPQEIDPDLTQSMARLRRAGVTLLNQSVLLRGVNDSAETLAQLSNALFDAGILPYYLHV 286 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D G +HF + E + +V +L +K+SG P ++ G K +D Sbjct: 287 LDKVQGAAHFLVDDNEARVLVKALMKKVSGYLVPRLAREIGGEASKTPLD 336 >gi|332160002|ref|YP_004296579.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664232|gb|ADZ40876.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 281 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P NP+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 1 MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 59 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 + CR+CFRR +G + + AL Y+ + ++ E+IF+GGDPL+ L + Sbjct: 60 INCRYCFRRHFPYQDNQG---NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWL 116 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L + I H++ LR H+R+P+V P RI EL Q L ++ V + H NH E Sbjct: 117 LDEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRD 176 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 ++++L AG+ LL+QSVLL+G+NDD E+LA L T + I PYY+H D G +HF + Sbjct: 177 SMAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMV 236 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E ++++ L ++SG P ++ G K +D Sbjct: 237 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 274 >gi|149911234|ref|ZP_01899857.1| hypothetical 38.7 kDa protein [Moritella sp. PE36] gi|149805688|gb|EDM65687.1| hypothetical 38.7 kDa protein [Moritella sp. PE36] Length = 310 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 151/276 (54%), Gaps = 7/276 (2%) Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 N+ + +PNDPI Q IP+ EEL+ + DP+ D+ H + G++H+Y DR+LL Sbjct: 32 NIADFDDPNDPILLQIIPKLEELDTVKGFNLDPVNDSQHEKITGLIHKYHDRVLLLFSKH 91 Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 CP++CR+CFR+ S + + EA L+YI+ I EVI +GGDPL ++ L Sbjct: 92 CPIHCRYCFRKGYNYSDN----NKQQIEAWLSYIESNHDIEEVILSGGDPLFVNSATLLD 147 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP---VYIAIHANHPYEFSE 221 + + IKH+ R HSR+P+V P ++ L ++ A K + + IH+NH E ++ Sbjct: 148 FVTRVSAIKHITRFRIHSRMPVVSPSLLDKNLANRIRRAAKKDIDMILVIHSNHEKELTD 207 Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281 E + ++S G I+L+ SVLLKGIND+ L +L R + + + PYYL+ D G++ Sbjct: 208 EVVKSVSSFQAEGFIILNHSVLLKGINDNALTLKSLSRKLIRMGVIPYYLNLLDKIEGSA 267 Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 HF + I L++ SG P + D Y Sbjct: 268 HFFVEKNISLSIYQELQKISSGYLVPKLVQDNGKDY 303 >gi|16131971|ref|NP_418570.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia coli str. K-12 substr. MG1655] gi|89110867|ref|AP_004647.1| predicted lysine aminomutase [Escherichia coli str. K-12 substr. W3110] gi|238903254|ref|YP_002929050.1| putative lysine aminomutase [Escherichia coli BW2952] gi|256025082|ref|ZP_05438947.1| putative lysine aminomutase [Escherichia sp. 4_1_40B] gi|301027965|ref|ZP_07191250.1| KamA family protein [Escherichia coli MS 196-1] gi|732002|sp|P39280|YJEK_ECOLI RecName: Full=Uncharacterized KamA family protein YjeK gi|536990|gb|AAA97045.1| ORF_f342 [Escherichia coli str. K-12 substr. MG1655] gi|1790589|gb|AAC77106.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia coli str. K-12 substr. MG1655] gi|85676898|dbj|BAE78148.1| predicted lysine aminomutase [Escherichia coli str. K12 substr. W3110] gi|238862637|gb|ACR64635.1| predicted lysine aminomutase [Escherichia coli BW2952] gi|260451026|gb|ACX41448.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli DH1] gi|299878944|gb|EFI87155.1| KamA family protein [Escherichia coli MS 196-1] gi|315138701|dbj|BAJ45860.1| putative lysine aminomutase [Escherichia coli DH1] gi|323380464|gb|ADX52732.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli KO11] gi|323940066|gb|EGB36260.1| KamA family protein [Escherichia coli E482] Length = 342 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E I P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++C + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVECFARSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+ +ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|218692484|ref|YP_002400696.1| putative lysine aminomutase [Escherichia coli ED1a] gi|218430048|emb|CAR11037.2| putative lysine aminomutase [Escherichia coli ED1a] Length = 342 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 96/273 (35%), Positives = 152/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|238750049|ref|ZP_04611552.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC 43380] gi|238711593|gb|EEQ03808.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC 43380] Length = 335 Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust. Identities = 98/278 (35%), Positives = 154/278 (55%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P NP+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 55 MQPGNPSDPLLLQVLTAREEFITAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L + Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDNELSWL 170 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L L I H++ LR H+R+P+V P RI L Q L E+ V + H NH E ++ Sbjct: 171 LDELESIPHIKRLRIHTRLPVVIPARITAALCQRLSESRLQVLMVTHINHANEIDQDLRD 230 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 ++++L AG+ LL+QSVLL+G+NDD E+LA L + I PYY+H D G +HF + Sbjct: 231 SMAQLKRAGVTLLNQSVLLRGVNDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E ++++ L ++SG P ++ G K +D Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 328 >gi|225569398|ref|ZP_03778423.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM 15053] gi|225161606|gb|EEG74225.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM 15053] Length = 393 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 110/312 (35%), Positives = 177/312 (56%), Gaps = 17/312 (5%) Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88 + I Y +++ +LIN + D I + IP E++I D G+++++ L+G Sbjct: 61 RNILEKYPMSVPRYYLSLINTDDEGDCIRKMSIPSFSEMDITGTF--DTSGESSNTKLRG 118 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + H+YP +LL + C +YCR+CFR+ MVGS ++ +D + A++YI E ++I V+ Sbjct: 119 LQHKYPQTVLLLSTNRCAMYCRYCFRKRMVGSHTEEIV--EDIDKAVSYIAEHTEISNVL 176 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKE--AG 204 +GGD +L + ++ L L I H+ +RF ++VP+V PQRI + EL LK+ Sbjct: 177 ISGGDSFLLDNAAIEHYLSALCSIGHIDYIRFGTKVPVVFPQRITDDRELQDILKKYCTK 236 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 K +Y+ NHP E +E A+ A++ L + G+I+ +Q+VLLKGINDDP +LA LM+ F ++ Sbjct: 237 KQLYVMTQFNHPSELTEHAVNAVNCLKSLGLIVKNQTVLLKGINDDPAVLAGLMKQFTKI 296 Query: 265 RIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGGYGKVKI 322 I PYY+ G + F++ + G IV K +G + F Y L P GKV+I Sbjct: 297 GILPYYVFQCRPVTGVKNQFQVPLRTGYDIVEQAKRLQNGNGKCFRYALSNPD--GKVEI 354 Query: 323 -----DTHNIKK 329 D+H I K Sbjct: 355 IGKMDDSHMIFK 366 >gi|56707865|ref|YP_169761.1| hypothetical protein FTT_0750 [Francisella tularensis subsp. tularensis SCHU S4] gi|110670336|ref|YP_666893.1| hypothetical protein FTF0750 [Francisella tularensis subsp. tularensis FSC198] gi|134301708|ref|YP_001121676.1| hypothetical protein FTW_0659 [Francisella tularensis subsp. tularensis WY96-3418] gi|224456943|ref|ZP_03665416.1| hypothetical protein FtultM_04156 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370360|ref|ZP_04986365.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874680|ref|ZP_05247390.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604357|emb|CAG45383.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320669|emb|CAL08766.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC198] gi|134049485|gb|ABO46556.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151568603|gb|EDN34257.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254840679|gb|EET19115.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159045|gb|ADA78436.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella tularensis subsp. tularensis NE061598] Length = 328 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++ Sbjct: 37 IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 96 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI + Sbjct: 97 HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+RI +L++ L E + Sbjct: 155 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERITTKLLKILSEHRLDTVLV 214 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 IH NHP E + + GII+L+QS LLK INDD +L L + ++ PYY Sbjct: 215 IHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 +H D +GT H+ ++ + I+ L E SG P ++PG K + H+ Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328 >gi|260556680|ref|ZP_05828898.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606] gi|260409939|gb|EEX03239.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606] Length = 338 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 +N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C Sbjct: 59 MNVKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 176 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + + Sbjct: 177 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 236 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L Sbjct: 237 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 296 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 E I + + G P + ++ G K + Sbjct: 297 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|57340042|gb|AAW50008.1| hypothetical protein FTT0750 [synthetic construct] Length = 363 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 97/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++ Sbjct: 63 IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 122 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI + Sbjct: 123 HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 180 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+RI +L++ L E + Sbjct: 181 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERITTKLLKILSEHRLDTVLV 240 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 IH NHP E + + GII+L+QS LLK INDD +L L + ++ PYY Sbjct: 241 IHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 300 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 +H D +GT H+ ++ + I+ L E SG P ++PG K + H+ Sbjct: 301 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 354 >gi|328472254|gb|EGF43124.1| lysine 2,3-aminomutase [Vibrio parahaemolyticus 10329] Length = 340 Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 95/275 (34%), Positives = 149/275 (54%), Gaps = 3/275 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P +E + DP+ D + + G++H+Y +R+L+ + C V CR Sbjct: 67 NPKDPLLRQVLPLSDEFEVHAGYSNDPL-DEQDNAIPGLLHKYKNRVLMIVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + + Y+ EK ++ EVIF+GGDPL+ + +L+ + Sbjct: 126 YCFRRHFPYQENKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+P+V P RI EL Q LK + + + H NH E ++E A+ +L Sbjct: 184 QIPHIKRLRIHSRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 A + LL+Q VLLKG+ND + L L + I PYYLH D G +HF + E Sbjct: 244 KEANVTLLNQGVLLKGVNDSVDALIQLSEALFDAGIMPYYLHVLDKVQGAAHFMVDDERA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++++A L E +SG P ++ G K +D H Sbjct: 304 RQLMAGLLENVSGYLIPTLTREIGGRKSKTPLDLH 338 >gi|308048213|ref|YP_003911779.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799] gi|307630403|gb|ADN74705.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799] Length = 340 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 94/294 (31%), Positives = 157/294 (53%), Gaps = 3/294 (1%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 E + + + A + P + DP+ RQ +P +E + DPIG+ + P+ G+ Sbjct: 46 EARRLFPMLVPKAFAAAMRPGDAQDPLLRQVLPVGDEFLVADGFGPDPIGEQD-GPMPGL 104 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +H+Y R+LL L C V CR+CFRR + + + + A YI ++I E++ Sbjct: 105 LHKYQSRVLLMLRTGCAVNCRYCFRRHFPYADHK--VGAAELAQAHEYIASDTRINELLL 162 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL+ L +++ + H++ LR H+R+P+V P RI +L+ L +A V + Sbjct: 163 SGGDPLMARDDHLAELVARFSDLPHLKRLRIHTRLPVVLPSRITDQLVSLLADAPWRVVM 222 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 +H NHP E E +A ++RL AG+ LL+Q+VLLKG+ND + L L + + PY Sbjct: 223 VLHINHPNELQPELVAGLARLKAAGVTLLNQAVLLKGVNDHADTLVALAEGLFDAGVLPY 282 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 YLH D AG +HF + + + ++A +++ G P + ++ G K ID Sbjct: 283 YLHLLDRVAGAAHFEVDEDRARALMAEQLQRLPGFLVPRLVREIAGEASKTPID 336 >gi|307132783|ref|YP_003884799.1| lysine 2,3-aminomutase [Dickeya dadantii 3937] gi|306530312|gb|ADN00243.1| lysine 2,3-aminomutase [Dickeya dadantii 3937] Length = 347 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 100/301 (33%), Positives = 161/301 (53%), Gaps = 5/301 (1%) Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83 Q+ ++ + + + A + P + DP+ Q + ++E + P DP+ D H Sbjct: 40 QLSAGRDARKLFPLRVPRAFAARMRPGDARDPLLLQVLTAQDEFIVTPGFSHDPL-DEQH 98 Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKS 142 S + G++H+Y +R LL + C V CR+CFRR +G + + AL YI+++ Sbjct: 99 SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQQP 155 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 Q+ E+IF+GGDPL+ L +L L I H++ LR H+R+P+V P RI EL Q L + Sbjct: 156 QLDEIIFSGGDPLMAKDHELDWLLNELEQIPHLKRLRIHTRLPVVIPARITAELCQRLAQ 215 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 + V + H NH E E +++RL AG+ LL+QSVLL+G+ND+ + LA L Sbjct: 216 SSLRVVLVTHINHANEIDAEFTDSMARLRRAGVTLLNQSVLLRGVNDNADTLAALSNALF 275 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + I PYYLH D G +HF + +E + ++ L ++SG P ++ G K + Sbjct: 276 DAGILPYYLHVLDKVQGAAHFLVPDDEARALIRELMTQVSGYLVPSLTREIGGEASKTLL 335 Query: 323 D 323 D Sbjct: 336 D 336 >gi|283786829|ref|YP_003366694.1| radical SAM superfamily protein [Citrobacter rodentium ICC168] gi|282950283|emb|CBG89930.1| radical SAM superfamily protein [Citrobacter rodentium ICC168] Length = 342 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 99/273 (36%), Positives = 152/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQQEFIAAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ +AAL YI ++ E+IF+GGDPL+ L+ +L L Sbjct: 126 YCFRRHFPYTENQG--NKRNWQAALDYINAHPELDEIIFSGGDPLMAKDHELEWLLTRLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I HV+ LR HSR+P+V P RI EL + + + H NH E + A+++L Sbjct: 184 DIGHVKRLRIHSRLPVVIPARITGELAARFARSSLQILLVNHINHANEIDGDFREAMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+QSVLL+G+ND+ LA+L + + PYYLH D G +HF +T +E Sbjct: 244 RAAGVTLLNQSVLLRGVNDNARTLADLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L ISG P ++ G K ID Sbjct: 304 RQIMRELLTLISGYMVPKLAREIGGEPSKTPID 336 >gi|156932380|ref|YP_001436296.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894] gi|156530634|gb|ABU75460.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894] Length = 342 Score = 179 bits (454), Expect = 5e-43, Method: Compositional matrix adjust. Identities = 102/307 (33%), Positives = 164/307 (53%), Gaps = 5/307 (1%) Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77 N+ E++ ++ +++ + A + NP DP+ RQ + +EE P DP Sbjct: 34 NIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTAREEFVAAPGFTTDP 93 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALA 136 + + N S + G++H+Y +R LL + C V CR+CFRR +G + ++ +AAL Sbjct: 94 LEEQN-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG---NKRNWQAALD 149 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196 YI ++ E+IF+GGDPL+ L+ ++ L I H++ LR HSR+PIV P RI L Sbjct: 150 YIAAHPELDEIIFSGGDPLMAKDHELEWLVAHLEAIPHIRRLRIHSRLPIVIPARITDAL 209 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 ++ L E V + H NH E + +++L AG+ LL+QSVLLKG+ND+ LA Sbjct: 210 VRLLGETRLQVLLVNHINHAQEIDDAFREGMAKLRAAGVTLLNQSVLLKGVNDNAATLAA 269 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L + + PYYLH D G +HF ++ +E + I+ L ++SG P ++ G Sbjct: 270 LSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSRVSGYLVPKLAREIGGE 329 Query: 317 YGKVKID 323 K +D Sbjct: 330 PSKTPLD 336 >gi|285018690|ref|YP_003376401.1| lysine aminomutase [Xanthomonas albilineans GPE PC73] gi|283473908|emb|CBA16409.1| probable lysine aminomutase protein [Xanthomonas albilineans] Length = 315 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 96/269 (35%), Positives = 147/269 (54%), Gaps = 2/269 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P+DP+ RQ +P EL+ +P D +GD G++H+Y R LL C V+CR Sbjct: 44 DPHDPLLRQVLPLDAELHRVPGFALDAVGDGAAKKADGVIHKYRGRALLVATGSCAVHCR 103 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR +++ + A+A I I EVI +GGDPL L+ +L ++ + L Sbjct: 104 YCFRRHFPYAEESA--ARDGWRDAVAAIAADPSIEEVILSGGDPLSLATPKLVELTEALT 161 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 + ++ LR HSR+P+V P+RI+ L+ L+ P+ + IHANH EF AA++RL Sbjct: 162 ALPQIKRLRLHSRLPVVLPERIDAPLLAWLRALPWPLAVVIHANHANEFDAAVDAALARL 221 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 +AG LL+Q+VLL+G+ND E LA L + PYYLH D G +HF + Sbjct: 222 RDAGAQLLNQAVLLRGVNDTVEALAKLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDATA 281 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319 + +L ++SG P + ++PG K Sbjct: 282 LDLHRALASRLSGYLVPKLVREIPGDSSK 310 >gi|238787518|ref|ZP_04631316.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii ATCC 33641] gi|238724305|gb|EEQ15947.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii ATCC 33641] Length = 335 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 155/278 (55%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P NP+DP+ Q + +EE P +DP+ D S + G++H+Y +R LL + C Sbjct: 55 MQPGNPSDPLLLQVLTAREEFIAAPGFTDDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + + AL YI++ ++ E+IF+GGDPL+ L + Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWQQALDYIRQHPELDEIIFSGGDPLMAKDSELSWL 170 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 + L I H++ LR HSR+P+V P RI P L Q L ++ V + H NH E Sbjct: 171 VGELESITHIKRLRIHSRLPVVIPARITPALCQLLGDSRLQVLMVTHINHANEIDSSFRD 230 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 ++++L AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF + Sbjct: 231 SMAQLKRAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E ++++ L ++SG P ++ G K +D Sbjct: 291 NDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 328 >gi|331655977|ref|ZP_08356965.1| putative radical SAM domain protein [Escherichia coli M718] gi|331046331|gb|EGI18421.1| putative radical SAM domain protein [Escherichia coli M718] Length = 342 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 244 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|27904534|ref|NP_777660.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46397205|sp|Q89B32|Y022_BUCBP RecName: Full=Uncharacterized KamA family protein bbp_022 gi|27903931|gb|AAO26765.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 340 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 99/289 (34%), Positives = 158/289 (54%), Gaps = 2/289 (0%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +S+ + + + ++P DP+ Q +P +EL +DP+ + + + G++ +Y Sbjct: 50 FSLRVPKTFVSRMKKNDPFDPLLLQILPHTKELKNNHNFVQDPLEETKNVIIPGLIRKYN 109 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 +RILL L C + CR+CFRR SQ + ++ A+ YI+ ++ + EVI +GGDP Sbjct: 110 NRILLLLKTNCAINCRYCFRRYFPYSQHPG--NKENLNLAIQYIKNQTDLNEVILSGGDP 167 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+ +Q ++ TL I H++ LR H+R+PIV P RI L + L + I H N Sbjct: 168 LMAKDHEIQWIVNTLSNIYHIKRLRIHTRLPIVIPSRITNNLCKILSTTRLKILIVTHIN 227 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 H E + E I++L GI LL+QSVLL+GIND+ +IL+ L ++ I PYYLH Sbjct: 228 HAQEINHELQYNINKLHKLGITLLNQSVLLRGINDNAKILSQLSNKLFDINILPYYLHIL 287 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D T+HF ++ ++ IV L ISG P + + PG K+ I+ Sbjct: 288 DKVKSTTHFYVSEKQASIIVVELLSMISGFLVPKLVCEHPGKNSKIYIN 336 >gi|330862365|emb|CBX72524.1| uncharacterized kamA family protein yjeK [Yersinia enterocolitica W22703] Length = 328 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P NP+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 48 MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 106 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 + CR+CFRR +G + + AL Y+ + ++ E+IF+GGDPL+ L + Sbjct: 107 INCRYCFRRHFPYQDNQG---NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWL 163 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L + I H++ LR H+R+P+V P RI EL Q L ++ V + H NH E Sbjct: 164 LDEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRD 223 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 ++++L AG+ LL+QSVLL+G+NDD E+LA L T + I PYY+H D G +HF + Sbjct: 224 SMAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMV 283 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E ++++ L ++SG P ++ G K +D Sbjct: 284 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 321 >gi|15834381|ref|NP_313154.1| hypothetical protein ECs5127 [Escherichia coli O157:H7 str. Sakai] gi|168747993|ref|ZP_02773015.1| KamA family protein [Escherichia coli O157:H7 str. EC4113] gi|168755334|ref|ZP_02780341.1| KamA family protein [Escherichia coli O157:H7 str. EC4401] gi|168761014|ref|ZP_02786021.1| KamA family protein [Escherichia coli O157:H7 str. EC4501] gi|168766424|ref|ZP_02791431.1| KamA family protein [Escherichia coli O157:H7 str. EC4486] gi|168774523|ref|ZP_02799530.1| KamA family protein [Escherichia coli O157:H7 str. EC4196] gi|168780577|ref|ZP_02805584.1| KamA family protein [Escherichia coli O157:H7 str. EC4076] gi|168784782|ref|ZP_02809789.1| KamA family protein [Escherichia coli O157:H7 str. EC869] gi|168802345|ref|ZP_02827352.1| KamA family protein [Escherichia coli O157:H7 str. EC508] gi|195935938|ref|ZP_03081320.1| hypothetical protein EscherichcoliO157_05645 [Escherichia coli O157:H7 str. EC4024] gi|208808559|ref|ZP_03250896.1| KamA family protein [Escherichia coli O157:H7 str. EC4206] gi|208813031|ref|ZP_03254360.1| KamA family protein [Escherichia coli O157:H7 str. EC4045] gi|208818769|ref|ZP_03259089.1| KamA family protein [Escherichia coli O157:H7 str. EC4042] gi|209396148|ref|YP_002273691.1| KamA family protein [Escherichia coli O157:H7 str. EC4115] gi|217325173|ref|ZP_03441257.1| KamA family protein [Escherichia coli O157:H7 str. TW14588] gi|254796168|ref|YP_003081005.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359] gi|261225269|ref|ZP_05939550.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK2000] gi|261255480|ref|ZP_05948013.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK966] gi|291285561|ref|YP_003502379.1| KamA family protein [Escherichia coli O55:H7 str. CB9615] gi|13364604|dbj|BAB38550.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|187769928|gb|EDU33772.1| KamA family protein [Escherichia coli O157:H7 str. EC4196] gi|188017568|gb|EDU55690.1| KamA family protein [Escherichia coli O157:H7 str. EC4113] gi|189001809|gb|EDU70795.1| KamA family protein [Escherichia coli O157:H7 str. EC4076] gi|189357403|gb|EDU75822.1| KamA family protein [Escherichia coli O157:H7 str. EC4401] gi|189363903|gb|EDU82322.1| KamA family protein [Escherichia coli O157:H7 str. EC4486] gi|189368518|gb|EDU86934.1| KamA family protein [Escherichia coli O157:H7 str. EC4501] gi|189374875|gb|EDU93291.1| KamA family protein [Escherichia coli O157:H7 str. EC869] gi|189375646|gb|EDU94062.1| KamA family protein [Escherichia coli O157:H7 str. EC508] gi|208728360|gb|EDZ77961.1| KamA family protein [Escherichia coli O157:H7 str. EC4206] gi|208734308|gb|EDZ82995.1| KamA family protein [Escherichia coli O157:H7 str. EC4045] gi|208738892|gb|EDZ86574.1| KamA family protein [Escherichia coli O157:H7 str. EC4042] gi|209157548|gb|ACI34981.1| KamA family protein [Escherichia coli O157:H7 str. EC4115] gi|209750478|gb|ACI73546.1| hypothetical protein ECs5127 [Escherichia coli] gi|209750480|gb|ACI73547.1| hypothetical protein ECs5127 [Escherichia coli] gi|209750482|gb|ACI73548.1| hypothetical protein ECs5127 [Escherichia coli] gi|209750484|gb|ACI73549.1| hypothetical protein ECs5127 [Escherichia coli] gi|209750486|gb|ACI73550.1| hypothetical protein ECs5127 [Escherichia coli] gi|217321394|gb|EEC29818.1| KamA family protein [Escherichia coli O157:H7 str. TW14588] gi|254595568|gb|ACT74929.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359] gi|290765434|gb|ADD59395.1| KamA family protein [Escherichia coli O55:H7 str. CB9615] gi|320190719|gb|EFW65369.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. EC1212] gi|320638907|gb|EFX08553.1| putative lysine aminomutase [Escherichia coli O157:H7 str. G5101] gi|320644276|gb|EFX13341.1| putative lysine aminomutase [Escherichia coli O157:H- str. 493-89] gi|320649594|gb|EFX18118.1| putative lysine aminomutase [Escherichia coli O157:H- str. H 2687] gi|320654990|gb|EFX22951.1| putative lysine aminomutase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660497|gb|EFX27958.1| putative lysine aminomutase [Escherichia coli O55:H7 str. USDA 5905] gi|320665766|gb|EFX32803.1| putative lysine aminomutase [Escherichia coli O157:H7 str. LSU-61] gi|326341801|gb|EGD65584.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1125] gi|326346624|gb|EGD70358.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1044] Length = 342 Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 153/273 (56%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 244 RRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|237729080|ref|ZP_04559561.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908809|gb|EEH94727.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 342 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 151/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + +EE P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTAQEEFVAAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + A+ YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWQVAIDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+S L Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITEGLVERFAHSSLQILLVNHINHANEIDETFRQAMSSL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 244 RAAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RRIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336 >gi|91213696|ref|YP_543682.1| hypothetical protein UTI89_C4744 [Escherichia coli UTI89] gi|110644505|ref|YP_672235.1| hypothetical protein ECP_4390 [Escherichia coli 536] gi|117626495|ref|YP_859818.1| putative lysine aminomutase [Escherichia coli APEC O1] gi|191173357|ref|ZP_03034886.1| KamA family protein [Escherichia coli F11] gi|218561306|ref|YP_002394219.1| lysine aminomutase [Escherichia coli S88] gi|237703813|ref|ZP_04534294.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|300975204|ref|ZP_07172897.1| KamA family protein [Escherichia coli MS 200-1] gi|331660724|ref|ZP_08361656.1| putative radical SAM domain protein [Escherichia coli TA206] gi|91075270|gb|ABE10151.1| Hypothetical protein YjeK [Escherichia coli UTI89] gi|110346097|gb|ABG72334.1| hypothetical protein YjeK (radical SAM superfamily) [Escherichia coli 536] gi|115515619|gb|ABJ03694.1| putative lysine aminomutase [Escherichia coli APEC O1] gi|190906333|gb|EDV65943.1| KamA family protein [Escherichia coli F11] gi|218368075|emb|CAR05882.1| putative lysine aminomutase [Escherichia coli S88] gi|222035919|emb|CAP78664.1| Uncharacterized kamA family protein yjeK [Escherichia coli LF82] gi|226901725|gb|EEH87984.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294490194|gb|ADE88950.1| KamA family protein [Escherichia coli IHE3034] gi|300308759|gb|EFJ63279.1| KamA family protein [Escherichia coli MS 200-1] gi|307629218|gb|ADN73522.1| putative lysine aminomutase [Escherichia coli UM146] gi|312948798|gb|ADR29625.1| putative lysine aminomutase [Escherichia coli O83:H1 str. NRG 857C] gi|315288493|gb|EFU47891.1| KamA family protein [Escherichia coli MS 110-3] gi|315297615|gb|EFU56892.1| KamA family protein [Escherichia coli MS 16-3] gi|323950784|gb|EGB46662.1| KamA family protein [Escherichia coli H252] gi|323955577|gb|EGB51340.1| KamA family protein [Escherichia coli H263] gi|324015063|gb|EGB84282.1| KamA family protein [Escherichia coli MS 60-1] gi|331051766|gb|EGI23805.1| putative radical SAM domain protein [Escherichia coli TA206] Length = 342 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPNDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|318607441|emb|CBY28939.1| lysine 2,3-aminomutase [Yersinia enterocolitica subsp. palearctica Y11] Length = 343 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P NP+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 63 MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 121 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 + CR+CFRR +G + + AL Y+ + ++ E+IF+GGDPL+ L + Sbjct: 122 INCRYCFRRHFPYQDNQG---NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWL 178 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L + I H++ LR H+R+P+V P RI EL Q L ++ V + H NH E Sbjct: 179 LDEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRD 238 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 ++++L AG+ LL+QSVLL+G+NDD E+LA L T + I PYY+H D G +HF + Sbjct: 239 SMAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMV 298 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E ++++ L ++SG P ++ G K +D Sbjct: 299 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 336 >gi|323498137|ref|ZP_08103141.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326] gi|323316848|gb|EGA69855.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326] Length = 340 Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 154/276 (55%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P EE ++ DP+ + +++ + G++H+Y +R L+ + C + CR Sbjct: 67 NPFDPLLRQVLPLSEEFDVKQGYSNDPLLEQDNA-IPGLLHKYRNRALMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L Y+Q++ +I EVI +GGDPL+ L+ +++ + Sbjct: 126 YCFRRHFPYQENKG---SKAVWQQSLDYVQQQPEINEVILSGGDPLMAKDDELRWLVERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 IKH++ +R HSR+P+V P RI EL++ V + H NH E + E A +R Sbjct: 183 ADIKHIKRIRIHSRLPVVIPARITDELLEIFSTTRLQVVMVTHVNHAQEINHELRLATAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AGI LL+Q V+LKG+ND E L + I PYY+H D G +HF ++ E Sbjct: 243 LKLAGITLLNQGVMLKGVNDSIEAQVALSEALFDANILPYYIHVLDKVQGAAHFYISDHE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 AKRIMAGLLERVSGYLVPTLTREIGGRSSKTPLDLH 338 >gi|71276242|ref|ZP_00652521.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon] gi|71900995|ref|ZP_00683107.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1] gi|170730740|ref|YP_001776173.1| hypothetical protein Xfasm12_1634 [Xylella fastidiosa M12] gi|71163003|gb|EAO12726.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon] gi|71729246|gb|EAO31365.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1] gi|167965533|gb|ACA12543.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 357 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 100/267 (37%), Positives = 147/267 (55%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E + + D +GD GI+ +Y RILL C V+CR+C Sbjct: 90 HDPLLRQVLPMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYC 149 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR ++ T + EAA A+++ I EVI +GGDPL LS +L ++ LR I Sbjct: 150 FRRHFPYAED-TASHDRWREAA-AFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRSI 207 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+P+V P+RI+ L++ L PV IHANH EF AA++ L Sbjct: 208 AHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRG 267 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 G LL+Q+VLL+G+ND+ LA L + PYYLH D AGT+H+ + + Sbjct: 268 VGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARART 327 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + A L ++SG P ++ ++PG K Sbjct: 328 LHAELVARLSGYLVPRFVREVPGDSSK 354 >gi|87310204|ref|ZP_01092336.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645] gi|87287194|gb|EAQ79096.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645] Length = 346 Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust. Identities = 100/273 (36%), Positives = 152/273 (55%), Gaps = 4/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P+DP+ Q +P EL+ DP+GD+ G++ +Y R LL C V+CR Sbjct: 76 DPHDPLLVQVLPVLRELDSPQGFTVDPVGDDQAVLTPGLLQKYAGRALLVTTGACAVHCR 135 Query: 111 FCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR ++ V + D AALA I EV+ +GGDPL L+ L ++ + L Sbjct: 136 YCFRRHFPYAEVPSGVAAWSDAIAALA---ADPSIQEVLLSGGDPLTLADATLAQLAQQL 192 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ +R H+R+PI+ PQRIN +L+ L + IHANHP E +AAI R Sbjct: 193 AAIPHLRRIRVHTRLPIMIPQRINDQLLSWLVGTRLTPIVVIHANHPRELDLPVVAAIDR 252 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+++L+Q+VLL G+NDD ++LA L ++ R+ PYYLH D G +HF + E Sbjct: 253 LNQAGVMVLNQAVLLAGVNDDVDVLAELSERLIDQRVTPYYLHQLDRVKGAAHFEVPRER 312 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 G ++ L+ ++ G P Y+ ++ G K I Sbjct: 313 GVDLIRQLRARLPGYAVPRYVEEIAGQPNKTII 345 >gi|194366516|ref|YP_002029126.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas maltophilia R551-3] gi|194349320|gb|ACF52443.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas maltophilia R551-3] Length = 346 Score = 178 bits (452), Expect = 9e-43, Method: Compositional matrix adjust. Identities = 95/266 (35%), Positives = 144/266 (54%), Gaps = 4/266 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + DP+ RQ +P EE+ P D +GD G++ +Y R LL C + CR Sbjct: 77 DAADPLLRQVLPIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCR 136 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR G++ + + A+A I I EVI +GGDPL L+ +L ++ L Sbjct: 137 YCFRRHFDYGAENA---AKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDAL 193 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 R I H++ LR H+R+PIV P+R++ EL+ L P+ I +HANH EF AA++R Sbjct: 194 RQIPHIRRLRIHTRLPIVLPERVDEELLAWLGGLPWPLAIVVHANHANEFDASVDAAMAR 253 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G LL+Q+VLL+G+ND + L +L + PYYLH D G +HF + + Sbjct: 254 LRGTGAQLLNQAVLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTQ 313 Query: 290 GQKIVASLKEKISGLCQPFYILDLPG 315 + ++A L ++SG P + +LPG Sbjct: 314 AKALIAGLTARLSGYLIPKLVRELPG 339 >gi|187931527|ref|YP_001891511.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712436|gb|ACD30733.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147] Length = 328 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++ Sbjct: 37 IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 96 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI + Sbjct: 97 HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E + Sbjct: 155 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 IH NHP E + + GII+L+QS LLK INDD +L L + ++ PYY Sbjct: 215 IHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 +H D +GT H+ ++ + I+ L E SG P ++PG K + H+ Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328 >gi|293609733|ref|ZP_06692035.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828185|gb|EFF86548.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 338 Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/274 (35%), Positives = 149/274 (54%), Gaps = 2/274 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 +N NP DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C Sbjct: 59 MNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 118 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V+CR+CFRR + + ++D YI+ I E+I +GGDPL LS+++L L Sbjct: 119 VHCRYCFRRHF--PYQENLPKNEDWLNIKNYIEANPNINEIILSGGDPLTLSNRKLALWL 176 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + L +K ++ILR HSRVPIV P RI+ +LI LK + + + +H+NH E + + Sbjct: 177 ERLSSLKQIEILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLVVHSNHASELDDFTCSK 236 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L++ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L Sbjct: 237 LLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYLHVLDKVKGAQHFDLE 296 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 + I + + G P + ++ G K Sbjct: 297 SSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKT 330 >gi|215489493|ref|YP_002331924.1| predicted lysine aminomutase [Escherichia coli O127:H6 str. E2348/69] gi|312965822|ref|ZP_07780048.1| kamA family protein [Escherichia coli 2362-75] gi|215267565|emb|CAS12020.1| predicted lysine aminomutase [Escherichia coli O127:H6 str. E2348/69] gi|312289065|gb|EFR16959.1| kamA family protein [Escherichia coli 2362-75] Length = 342 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|208779105|ref|ZP_03246451.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida FTG] gi|208744905|gb|EDZ91203.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida FTG] Length = 328 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 95/284 (33%), Positives = 152/284 (53%), Gaps = 4/284 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A+ + N NDP+ +Q +P +E I DP+ + N++ + G++H+Y R+LL Sbjct: 49 FADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQ 108 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C V+CR+CFR+E K + KD A YI I EVI +GGDPL+ + + L Sbjct: 109 TSCAVHCRYCFRKEF--DYKENIPGRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEIL 166 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 + ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E + IH NHP E + Sbjct: 167 EFFIENIQQIPHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDDN 226 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 + + GII L+QS LLK INDD +L L + ++ PYY+H D +GT H Sbjct: 227 VSKVLKEIHKHGIITLNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKH 286 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 + ++ + I+ L E SG P ++PG K + H+ Sbjct: 287 Y--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328 >gi|320193527|gb|EFW68164.1| Lysine 2,3-aminomutase [Escherichia coli WV_060327] Length = 342 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|262278291|ref|ZP_06056076.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202] gi|262258642|gb|EEY77375.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202] Length = 338 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 100/291 (34%), Positives = 152/291 (52%), Gaps = 2/291 (0%) Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91 S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++H Sbjct: 44 SEQFKLRVPRAFVGKMNVKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLH 103 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 +Y R LL L C V+CR+CFRR + + + D YI+ I E+I +G Sbjct: 104 KYQSRFLLTLTGACAVHCRYCFRRHF--PYQENLPKNDDWPNIKNYIEANPHINEIILSG 161 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 GDPL LS++++ L+ L +K ++ILR HSRVPIV P RI+ ELI LK + + + + Sbjct: 162 GDPLTLSNRKIALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVV 221 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271 H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYL Sbjct: 222 HSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYL 281 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 H D G HF L E I + + G P + ++ G K + Sbjct: 282 HVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332 >gi|50122897|ref|YP_052064.1| hypothetical protein ECA3977 [Pectobacterium atrosepticum SCRI1043] gi|49613423|emb|CAG76874.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 347 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 99/290 (34%), Positives = 156/290 (53%), Gaps = 5/290 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A + NP+DP+ Q + + E + P DP+ D HS + G++H+Y Sbjct: 51 FALRVPRAFAARMQKGNPDDPLLLQVLTARAEFIVTPGFTHDPL-DEQHSVVPGLLHKYH 109 Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 +R LL + C V CR+CFRR +G + + AL YI++ ++ E+IF+GGD Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWLQALDYIRQHPELDEIIFSGGD 166 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+ L ++ L +I H++ LR HSR+P+V P RI L L + V + H Sbjct: 167 PLMAKDHELDWLITELEHIPHLKRLRIHSRLPVVIPARITDALCDRLSRSSLQVLLVTHI 226 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E + +++RL +G+ LL+QSVLL+G+ND E LA L + I PYYLH Sbjct: 227 NHPQEIDPDLTQSMARLRRSGVTLLNQSVLLRGVNDSAETLARLSNALFDAGILPYYLHV 286 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D G +HF + E + +V +L +K+SG P ++ G K +D Sbjct: 287 LDKVQGAAHFLVDDNEARVLVKALMKKVSGYLVPRLAREIGGEASKTPLD 336 >gi|153838020|ref|ZP_01990687.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810] gi|149748628|gb|EDM59487.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810] Length = 340 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 94/275 (34%), Positives = 149/275 (54%), Gaps = 3/275 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P +E + DP+ D + + G++H+Y +R+L+ + C V CR Sbjct: 67 NPKDPLLRQVLPLSDEFEVHAGYSNDPL-DEQDNAIPGLLHKYKNRVLMIVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + + Y+ EK ++ EVIF+GGDPL+ + +L+ + Sbjct: 126 YCFRRHFPYQENKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+P+V P RI EL Q LK + + + H NH E ++E A+ +L Sbjct: 184 KIPHIKRLRIHSRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 A + LL+Q VLLKG+ND + L+ L + I PYYLH D G +HF + E Sbjct: 244 KEANVTLLNQGVLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++++ L E +SG P ++ G K +D H Sbjct: 304 RQLMVGLLENVSGYLIPTLTREIGGRKSKTPLDLH 338 >gi|37681287|ref|NP_935896.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016] gi|37200038|dbj|BAC95867.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016] Length = 340 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 100/276 (36%), Positives = 153/276 (55%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ +P EE I P DP+ + +++ + G++H+Y +R L+ + C + CR Sbjct: 67 NPNDPLLRQVLPVSEEHEIHPGYSVDPLEEQDNA-IPGLLHKYHNRALMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + S + EVIF+GGDPL+ LQ +++ + Sbjct: 126 YCFRRHFPYQDNKG---SKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL Q L++ V + H NH E + E + + R Sbjct: 183 ADIPHIKRLRIHSRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+Q VLLKG+ND E +L + I PYYLH D G +HF ++ +E Sbjct: 243 LKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + I+ L ++SG P ++ G K +D + Sbjct: 303 AKAIMRGLITQVSGYLVPTLTREIGGRPSKTPLDLY 338 >gi|294634433|ref|ZP_06712969.1| KamA family protein [Edwardsiella tarda ATCC 23685] gi|291092143|gb|EFE24704.1| KamA family protein [Edwardsiella tarda ATCC 23685] Length = 342 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 98/280 (35%), Positives = 152/280 (54%), Gaps = 5/280 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P +P DP+ RQ + E P DP+ + HS + G++H+Y +R LL + C Sbjct: 63 MRPGDPQDPLLRQVMSDAAEFIETPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCA 121 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +GT + + AL Y++E ++ E+IF+GGDPL+ L + Sbjct: 122 VNCRYCFRRHFPYQENQGT---RANWQRALEYLREHPELDEIIFSGGDPLMAKDHELDWL 178 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L + H++ LR HSR+P+V P R+ L Q + E+ + + H NH E E A Sbjct: 179 FSQLESLPHLKRLRIHSRLPVVIPARVTETLCQRMAESRLQMLLVTHINHANEIDEALSA 238 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 A+ RL AG+ LL+QSVLL+G+ND+ + LA L + I PYYLH D G +HF + Sbjct: 239 AMQRLKQAGVTLLNQSVLLRGVNDNADTLAALSNALFDAGILPYYLHVLDRVQGGAHFMV 298 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 +E + ++ L ++SG P ++ G K ++D H Sbjct: 299 PDDEARVLMHGLLARVSGYLVPRLTREIGGEPSKTQLDLH 338 >gi|254369527|ref|ZP_04985538.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|157122481|gb|EDO66616.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] Length = 328 Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++ Sbjct: 37 IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADEEVIDQAYSSDPLDEKNYNKVPGLL 96 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI + Sbjct: 97 HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E + Sbjct: 155 GGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H NHP E + + GII+L+QS LLK INDD +L L + ++ PYY Sbjct: 215 VHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 +H D +GT H+ ++ + I+ L E SG P ++PG K + H+ Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328 >gi|254283526|ref|ZP_04958494.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium NOR51-B] gi|219679729|gb|EED36078.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium NOR51-B] Length = 356 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/268 (35%), Positives = 138/268 (51%), Gaps = 2/268 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P +PNDP+ RQ + E +P EDP+ + + +P GIVH+Y R+LL C Sbjct: 76 MRPGDPNDPLLRQVLAVSAEQQHVPGYVEDPLQERDANPTPGIVHKYQGRLLLMPTAACA 135 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V+CR+CFRR L + A+ Y+ + ++ EVI +GGDPLIL L +++ Sbjct: 136 VHCRYCFRRHF--PYADNRLDEGALDRAMDYLASQPEVTEVILSGGDPLILDDAALGRLI 193 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 L + H+ LR HSR+P+V P R+ L + L + + +H NHP E Sbjct: 194 DRLESLGHLSRLRIHSRLPVVLPDRLTEALAERLDASRLSTSLVLHGNHPAEIDAGLTER 253 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + R A + LL+QSVLL G+NDDP +L L E + PYYLH D AG HF + Sbjct: 254 LQRWRPASLTLLNQSVLLAGVNDDPAVLIALSERLFEAGVLPYYLHLLDPVAGVGHFAVA 313 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLP 314 E+ I + K+ G P +LP Sbjct: 314 DEQALAIYRQMAAKLPGYLLPKLARELP 341 >gi|254498454|ref|ZP_05111183.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12] gi|254352309|gb|EET11115.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12] Length = 328 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 104/279 (37%), Positives = 145/279 (51%), Gaps = 3/279 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A + NP DP+ Q + EL I DP+ + + +PLKG++H+Y R+LL L Sbjct: 49 FAQRMQKGNPQDPLLLQVLAVATELEIQDGYEFDPLRERDSNPLKGLIHKYHGRVLLTLT 108 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 VC V CRFCFRR + AYI + S I EVI +GGDPL+ S Sbjct: 109 GVCAVNCRFCFRRHFPYQDNNP--GRHGFKDICAYIAKDSSITEVILSGGDPLLASDLVF 166 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 ++L+ L I HV +RFH+R+PIV P+RI+ L+ L I +H NHP E +++ Sbjct: 167 SELLQQLEQIPHVHTVRFHTRIPIVFPERIDHGLLCVLATTKLKKVIVLHCNHPQELNDD 226 Query: 223 AIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281 + A+ L AG LL+Q+VLL GIND+ ILA L + + PYYLH D G + Sbjct: 227 EVRHALRALRQAGCHLLNQTVLLSGINDNAPILAALSQALFAQDVIPYYLHILDKVKGAA 286 Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 HF L + Q I L++ + G P + PG K Sbjct: 287 HFDLPLATVQTIYQQLQQLVPGYLLPRLACEEPGKLSKT 325 >gi|21672314|ref|NP_660381.1| hypothetical protein BUsg020 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|22654299|sp|Q44634|Y020_BUCAP RecName: Full=Uncharacterized KamA family protein BUsg_020 gi|21622913|gb|AAM67592.1| hypothetical 38.7 kDa protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 337 Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 99/271 (36%), Positives = 151/271 (55%), Gaps = 4/271 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A+ + ++P DP+ Q I + +E + EDP+ + L G++H+Y DR+L L Sbjct: 59 FASRMKKNDPKDPLLLQVITKNQEFLNNLQFNEDPVKEKKDIVLPGLLHKYKDRVLWILK 118 Query: 103 HVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C + CR+CFR+ KG + K+ L YI + ++ EVI +GGDPL+ Sbjct: 119 TNCAINCRYCFRKHFPYEKNKG---NKKNWIQILHYISQNIELNEVILSGGDPLMAKDHE 175 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221 L ++ +L IKH++ LR H+R+PIV P RI +L Q + + I H NHP E +E Sbjct: 176 LLWLITSLSKIKHIKRLRIHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINE 235 Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281 + ++ +L + +ILL+QSVLLK IND+ ILA L E I PYYLH D GTS Sbjct: 236 QLSDSLLKLKKSNVILLNQSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTS 295 Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 HF ++ ++ + I++ L + ISG P + D Sbjct: 296 HFLVSNKKAKSIISDLMKMISGFLVPRLVFD 326 >gi|241668391|ref|ZP_04755969.1| lysine 2,3-aminomutase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876924|ref|ZP_05249634.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842945|gb|EET21359.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 328 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 158/296 (53%), Gaps = 4/296 (1%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 I+ + + + AN + N NDP+ +Q +P +E I DP+ + N++ + G++ Sbjct: 37 ITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLDEKNYNKVPGLL 96 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R+LL C ++CR+CFR+E K + KD A YI I EVI + Sbjct: 97 HKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRKDWLKAFEYIANDQTIEEVILS 154 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E + Sbjct: 155 GGDPLLNNDEVLEFFIENIQQISHIKRLRIHSRIPVVLPERMTNKLLKILSEHRLDTVLV 214 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 IH NHP E + + + GII+L+QS LLK INDD +L L + ++ PYY Sbjct: 215 IHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 +H D +GT H+ ++ + I+ L E SG P ++PG K + H+ Sbjct: 275 IHSLDTVSGTKHY--NVDCAKDIMKKLSEISSGFMVPILTKEIPGYPSKKWLSFHS 328 >gi|123440740|ref|YP_001004732.1| hypothetical protein YE0356 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087701|emb|CAL10486.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 345 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P NP+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 63 MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 121 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + AL Y+++ ++ E+IF+GGDPL+ L + Sbjct: 122 VNCRYCFRRHFPYQDNQG---NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWL 178 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L + I H++ LR H+R+P+V P RI EL Q L ++ V + H NH E Sbjct: 179 LDEIENISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHANEIDASFRD 238 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 ++++L AG+ LL+QSVLL+G+NDD E+LA L + I PYY+H D G +HF + Sbjct: 239 SMAQLKRAGVTLLNQSVLLRGVNDDDEVLAALSNALFDAGILPYYIHVLDKVQGAAHFMV 298 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E ++++ L ++SG P ++ G K +D Sbjct: 299 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 336 >gi|160872273|ref|ZP_02062405.1| radical SAM domain protein [Rickettsiella grylli] gi|159121072|gb|EDP46410.1| radical SAM domain protein [Rickettsiella grylli] Length = 328 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 98/271 (36%), Positives = 147/271 (54%), Gaps = 4/271 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ +Q +P E I + +DP+ +N +PL G++H+Y RILL + C + CR Sbjct: 56 NPADPLLQQVLPIAAEARIQADFSDDPLQENAANPLPGLLHKYYGRILLTMTGACAINCR 115 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR G K + K A +AYIQ + I EVI +GGDPL+ L+ + L Sbjct: 116 YCFRRHFPYGKNK---VGGKAWHAIVAYIQADTSIREVILSGGDPLLAQDDYLKHRINDL 172 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I HV+I+R HSR+PIV P+R+ L+ L + H NH E ++ AI + Sbjct: 173 AAIPHVKIVRIHSRLPIVIPERMTTPLLNALTGTRLQPVLVTHCNHANELNDSVQQAIEK 232 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 I +L+Q+VLLKG+ND E L +L E I PYYLH D G +HF + E+ Sbjct: 233 CRQRKIHVLNQAVLLKGVNDSVEALVHLSERLFECGILPYYLHRLDKVQGATHFTVNEEK 292 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 + ++ +L+E++ G P + + G K+ Sbjct: 293 MKPLLKALRERLPGYLVPKCVYEQAGALSKM 323 >gi|320155059|ref|YP_004187438.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O] gi|319930371|gb|ADV85235.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O] Length = 340 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 99/276 (35%), Positives = 153/276 (55%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ +P EE I P DP+ + +++ + G++H+Y +R L+ + C + CR Sbjct: 67 NPNDPLLRQVLPVSEEHEIHPGYSVDPLEEQDNA-IPGLLHKYHNRALMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + S + EVIF+GGDPL+ LQ +++ + Sbjct: 126 YCFRRHFPYQDNKG---SKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL Q L++ V + H NH E + E + + R Sbjct: 183 ADIPHIKRLRIHSRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+Q VLLKG+ND E +L + + PYYLH D G +HF ++ +E Sbjct: 243 LKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGVLPYYLHVLDKVQGAAHFYVSDQE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + I+ L ++SG P ++ G K +D + Sbjct: 303 AKAIMRGLITQVSGYLVPTLTREIGGRPSKTPLDLY 338 >gi|328676803|gb|AEB27673.1| Lysine 2,3-aminomutase [Francisella cf. novicida Fx1] Length = 328 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++ Sbjct: 37 ITKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLDEKNYNKVPGLL 96 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI + Sbjct: 97 HKYHGRVLLIAQISCAVHCRYCFRKEF--DYKENIPGRKDWSKAFEYIANDQSIEEVILS 154 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E + Sbjct: 155 GGDPLLNNDEILEFFIENIQQIVHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 IH NHP E + + GII+L+QS LLK INDD +L L + ++ PYY Sbjct: 215 IHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 +H D +GT H+ ++ + I+ L E SG P ++PG K + H+ Sbjct: 275 IHSLDTVSGTKHY--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328 >gi|323965534|gb|EGB60988.1| KamA family protein [Escherichia coli M863] gi|327250088|gb|EGE61807.1| kamA family protein [Escherichia coli STEC_7v] Length = 342 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 152/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336 >gi|283780175|ref|YP_003370930.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM 6068] gi|283438628|gb|ADB17070.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM 6068] Length = 370 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 96/269 (35%), Positives = 150/269 (55%), Gaps = 2/269 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ Q +P E++ + DP+GD L G++ +Y R L+ L C V+CR Sbjct: 101 NPADPLLLQVLPVAGEMSSPADFLTDPVGDRESERLPGLLQKYDGRALMILSGSCAVHCR 160 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + L+ + A+ I + EVI +GGDPL + L ++ Sbjct: 161 YCFRRHYPYDETPRGLAG--WQPAIDEIAADESVQEVILSGGDPLTIVDSTLAELAHRFA 218 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSRVP+V P+R+N ELI ++ Y+ +H NHP E AA++RL Sbjct: 219 EIPHLKRLRVHSRVPVVIPERVNDELIGWMRGTRLAPYMVVHINHPREIDSAVAAALARL 278 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 +AGI++++Q+VLL+G+ND+ E L L T V +R+ PYYL D AG +HF + G Sbjct: 279 VDAGIVVMNQAVLLRGVNDNFEALHELCETLVNMRVLPYYLSQLDRVAGAAHFLVEESRG 338 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319 ++++ L+ + G P Y+ ++PG K Sbjct: 339 RELIEQLRASLPGYAIPRYVAEIPGRSSK 367 >gi|218551416|ref|YP_002385208.1| lysine aminomutase [Escherichia fergusonii ATCC 35469] gi|218358958|emb|CAQ91618.1| putative lysine aminomutase [Escherichia fergusonii ATCC 35469] gi|324112256|gb|EGC06234.1| KamA family protein [Escherichia fergusonii B253] gi|325499684|gb|EGC97543.1| lysine aminomutase [Escherichia fergusonii ECD227] Length = 342 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|323975512|gb|EGB70613.1| KamA family protein [Escherichia coli TW10509] Length = 342 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336 >gi|153825103|ref|ZP_01977770.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|149741249|gb|EDM55291.1| conserved hypothetical protein [Vibrio cholerae MZO-2] Length = 340 Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 98/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|323189972|gb|EFZ75250.1| kamA family protein [Escherichia coli RN587/1] gi|324008615|gb|EGB77834.1| KamA family protein [Escherichia coli MS 57-2] Length = 342 Score = 177 bits (448), Expect = 2e-42, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|26251039|ref|NP_757079.1| hypothetical protein c5231 [Escherichia coli CFT073] gi|227886810|ref|ZP_04004615.1| lysine 2,3-aminomutase [Escherichia coli 83972] gi|300975007|ref|ZP_07172811.1| KamA family protein [Escherichia coli MS 45-1] gi|301047630|ref|ZP_07194695.1| KamA family protein [Escherichia coli MS 185-1] gi|26111471|gb|AAN83653.1|AE016771_164 Hypothetical protein yjeK [Escherichia coli CFT073] gi|227836152|gb|EEJ46618.1| lysine 2,3-aminomutase [Escherichia coli 83972] gi|300300482|gb|EFJ56867.1| KamA family protein [Escherichia coli MS 185-1] gi|300410421|gb|EFJ93959.1| KamA family protein [Escherichia coli MS 45-1] gi|307556316|gb|ADN49091.1| hypothetical protein YjeK [Escherichia coli ABU 83972] gi|315294049|gb|EFU53401.1| KamA family protein [Escherichia coli MS 153-1] Length = 342 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|183179663|ref|ZP_02957874.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|183013074|gb|EDT88374.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 340 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 98/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVKLFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|238918348|ref|YP_002931862.1| hypothetical protein NT01EI_0386 [Edwardsiella ictaluri 93-146] gi|238867916|gb|ACR67627.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 342 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 98/276 (35%), Positives = 150/276 (54%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +PNDP+ RQ + E P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 DPNDPLLRQVMSDAAEFIETPGFSTDPLAEQ-HSVVPGLLHKYQNRALLLVKGSCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +GT + + A+AY+ E ++ E+IF+GGDPL+ L + L Sbjct: 126 YCFRRHFPYQENQGT---RANWQRAVAYLCEHPELDEIIFSGGDPLMAKDHELDWLFTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 + H++ LR HSR+P+V P R+ L Q + ++ + + H NH E E A+ R Sbjct: 183 EQLPHLRRLRIHSRLPVVIPARVTDALCQRMADSRLQMILVTHINHANEIDEALSEAMER 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+GIND+ + LA L E I PYYLH D G +HF + +E Sbjct: 243 LKQAGVTLLNQSVLLRGINDNADTLAALSNALFEAGILPYYLHVLDKVQGGAHFMVPDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++++ L ++SG P ++ G K +D H Sbjct: 303 ARRLMNGLLSRVSGYLVPRLTREIGGEPSKTPLDLH 338 >gi|217077357|ref|YP_002335075.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus TCF52B] gi|217037212|gb|ACJ75734.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus TCF52B] Length = 370 Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 104/294 (35%), Positives = 165/294 (56%), Gaps = 13/294 (4%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE--REDP 77 + +E+ +++K+++ Y LIN +PNDPI IPQ EL EE R D Sbjct: 15 LSEEEKNKLKKVTEKYKFRANDYYLKLINWDDPNDPIRNLIIPQIGEL----EEWGRLDA 70 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 + +++ KG+ H+Y D LL + VC +CRFCFR+ + + V+ +D L Y Sbjct: 71 SNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINVGEEVV--RDVSEDLEY 128 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE 195 I++ +I V+ TGGDPL+L+ K+L+K++ +R I HVQI+R S++ +P RI +PE Sbjct: 129 IKKHKEITNVLLTGGDPLLLATKKLEKIISQIREIDHVQIIRIGSKMVAFNPYRITEDPE 188 Query: 196 LIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 LI+ +K+ K +YI NHP E ++EAI A++ L AG IL +Q+ L+KG+N D + Sbjct: 189 LIELIKKYSTDEKKIYIMTQFNHPREITKEAIKAVNMLQKAGAILANQTPLIKGVNADWK 248 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 L L + + + PYY+ AG F + +EE +I +SGL + Sbjct: 249 TLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEAYQIFLKAIMNVSGLAK 302 >gi|218702846|ref|YP_002410475.1| putative lysine aminomutase [Escherichia coli IAI39] gi|218372832|emb|CAR20711.1| putative lysine aminomutase [Escherichia coli IAI39] Length = 342 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVFTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|254372685|ref|ZP_04988174.1| hypothetical protein FTCG_00250 [Francisella tularensis subsp. novicida GA99-3549] gi|151570412|gb|EDN36066.1| hypothetical protein FTCG_00250 [Francisella novicida GA99-3549] Length = 328 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 95/284 (33%), Positives = 152/284 (53%), Gaps = 4/284 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A+ + N NDP+ +Q +P +E I DP+ + N++ + G++H+Y R+LL Sbjct: 49 FADRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQ 108 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C V+CR+CFR+E K + KD A YI I EVI +GGDPL+ + + L Sbjct: 109 TSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEIL 166 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 + ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E + IH NHP E Sbjct: 167 EFFIENIQRIAHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGN 226 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 + + GII+L+QS LLK INDD +L L + ++ PYY+H D +GT H Sbjct: 227 VSKVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKH 286 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 + ++ + I+ L E SG P ++PG K + H+ Sbjct: 287 Y--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328 >gi|15839064|ref|NP_299752.1| hypothetical protein XF2474 [Xylella fastidiosa 9a5c] gi|9107671|gb|AAF85272.1|AE004055_10 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 357 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 100/267 (37%), Positives = 147/267 (55%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E + + D +GD GI+ +Y RILL C V+CR+C Sbjct: 90 HDPLLRQVLPMDAEEDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYC 149 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR ++ T + EAA A+++ I EVI +GGDPL LS +L ++ LR I Sbjct: 150 FRRHFPYAED-TASHDRWREAA-AFVRADPLIEEVILSGGDPLSLSTAKLVELTDALRSI 207 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+P+V P+RI+ L++ L PV IHANH EF AA++ L Sbjct: 208 PHLKRLRIHSRLPVVLPERIDTPLLEWLGALPWPVAFVIHANHANEFDASVDAALAALRG 267 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 G LL+Q+VLL+G+ND+ LA L + PYYLH D AGT+H+ + + Sbjct: 268 VGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARA 327 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + A L ++SG P ++ ++PG K Sbjct: 328 LHAELVARLSGYLVPRFVREVPGDSSK 354 >gi|254374142|ref|ZP_04989624.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151571862|gb|EDN37516.1| conserved hypothetical protein [Francisella novicida GA99-3548] Length = 328 Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust. Identities = 96/296 (32%), Positives = 157/296 (53%), Gaps = 4/296 (1%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 I+ + + + A+ + N NDP+ +Q +P +E I DP+ + N++ + G++ Sbjct: 37 IAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLDEKNYNKVPGLL 96 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R+LL C V+CR+CFR+E K + KD A YI I EVI + Sbjct: 97 HKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIPGRKDWLQAFEYIANDQSIEEVILS 154 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P+R+ +L++ L E + Sbjct: 155 GGDPLLNNDEILEFFIENIQQIPHIKRLRIHSRIPVVLPERMTTKLLKILSEHRLDTVLV 214 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 IH NHP E + + GII+L+QS LLK INDD +L L + ++ PYY Sbjct: 215 IHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 +H D +GT H+ ++ + I+ L E SG P ++PG K + H+ Sbjct: 275 IHSLDTVSGTKHY--NVDNDKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328 >gi|238764091|ref|ZP_04625046.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii ATCC 33638] gi|238697762|gb|EEP90524.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii ATCC 33638] Length = 335 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 95/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P NP+DP+ Q + +EE P +DP+ D S + G++H+Y +R LL + C Sbjct: 55 MQPGNPSDPLLLQVLTAREEFIAAPGFTDDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + AL Y+++ ++ E+IF+GGDPL+ L + Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWL 170 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L + I H++ LR H+R+P+V P RI EL Q L + V + H NH E Sbjct: 171 LDEIESISHIKRLRIHTRLPVVIPARITTELCQRLSNSRLQVVMVTHINHANEIDASFRD 230 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 ++++L AG+ LL+QSVLL+G+N+D E+LA L + I PYY+H D G +HF + Sbjct: 231 SMAQLKQAGVTLLNQSVLLRGVNNDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E ++++ L ++SG P ++ G K +D Sbjct: 291 DDDEARQLMKGLLRRVSGYLVPRLTREVGGQPSKTPLD 328 >gi|194437302|ref|ZP_03069400.1| KamA family protein [Escherichia coli 101-1] gi|253775226|ref|YP_003038057.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164078|ref|YP_003047186.1| putative lysine aminomutase [Escherichia coli B str. REL606] gi|297521176|ref|ZP_06939562.1| predicted lysine aminomutase [Escherichia coli OP50] gi|300929255|ref|ZP_07144732.1| KamA family protein [Escherichia coli MS 187-1] gi|194423858|gb|EDX39847.1| KamA family protein [Escherichia coli 101-1] gi|242379672|emb|CAQ34495.1| lysine 2,3-aminomutase [Escherichia coli BL21(DE3)] gi|253326270|gb|ACT30872.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975979|gb|ACT41650.1| predicted lysine aminomutase [Escherichia coli B str. REL606] gi|253980135|gb|ACT45805.1| predicted lysine aminomutase [Escherichia coli BL21(DE3)] gi|300462790|gb|EFK26283.1| KamA family protein [Escherichia coli MS 187-1] gi|323960335|gb|EGB55974.1| KamA family protein [Escherichia coli H489] gi|323970596|gb|EGB65855.1| KamA family protein [Escherichia coli TA007] Length = 342 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P R+ L++ + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|225403174|ref|ZP_03760471.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme DSM 15981] gi|225043179|gb|EEG53425.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme DSM 15981] Length = 364 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 169/302 (55%), Gaps = 11/302 (3%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +T A++L + E+ ++ I H+ + +T +LIN +P DPI R IP EE Sbjct: 11 ITKAEELRGYLKLSDEETSRLEAILEHFPMTITRYYLSLINWDDPKDPIRRMCIPSIEEN 70 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 ++ + D G+ +++ L G+ H+Y + +L+ H C +YCR CFR+ +VG Sbjct: 71 DMTG--KFDTSGEADNTILPGLQHKYNETVLILSTHRCAMYCRHCFRKRLVGISDD---E 125 Query: 128 SKDTEAALA-YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + D A +A YI++ ++I + +GGD + S+ +++ L+ I+H+ ++RF +R P+ Sbjct: 126 TADNVAEMADYIRQHAEISNALISGGDAFLNSNAVIRRYLELFSDIEHLDLIRFGTRTPV 185 Query: 187 VDPQRI--NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 V P RI +PEL++ L+ K +Y+ NHP E + EA A+ L NAG++L +Q+V Sbjct: 186 VLPARIYDDPELLETLQTYSQRKKIYVVTQFNHPAELTGEAKKAVDALLNAGVVLKNQTV 245 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKI 301 LLKG+NDD + L++ I PYY+ +G HF++ + EG +IV K+ Sbjct: 246 LLKGVNDDGRTMGELLKGLTRWGIAPYYIFQCRPVSGVGGHFQVPLTEGYRIVEEAKQFQ 305 Query: 302 SG 303 +G Sbjct: 306 NG 307 >gi|242237917|ref|YP_002986098.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii Ech703] gi|242129974|gb|ACS84276.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii Ech703] Length = 348 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 97/282 (34%), Positives = 150/282 (53%), Gaps = 3/282 (1%) Query: 42 VIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101 A + P +P+DP+ +Q I K E + P DP+ D S + G++H+Y +R LL + Sbjct: 58 AFAARMQPGDPDDPLLKQVITSKAEFLLTPGFTNDPL-DEQRSVVPGLLHKYHNRALLLV 116 Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C V CR+CFRR + S + AL YI++ ++ E+IF+GGDPL+ Sbjct: 117 KGGCAVNCRYCFRRHFPYQENQG--SKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHE 174 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221 L +L L I H++ LR HSR+P+V P RI L L ++ + + H NH E Sbjct: 175 LDGLLTGLEEITHLKRLRIHSRLPVVIPARITEALSLRLAQSRLQILLVTHINHANEIDA 234 Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281 E + RL AG+ LL+QSVLL+G+ND + LANL + + PYYLH D G + Sbjct: 235 ELAQGLHRLRRAGVTLLNQSVLLRGVNDSADELANLSHALFDAGVMPYYLHVLDKVQGAA 294 Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 HF + ++ ++ +L ++SG P + ++ G K +D Sbjct: 295 HFLVPDDKATALIKTLMTQVSGYLVPRLVREIGGEASKTPLD 336 >gi|170679776|ref|YP_001746542.1| KamA family protein [Escherichia coli SMS-3-5] gi|170517494|gb|ACB15672.1| KamA family protein [Escherichia coli SMS-3-5] Length = 342 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 151/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ I ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPNDPLLRQVITSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWQIALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 G+ LL+QSVLL+ +ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 244 RRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|229513581|ref|ZP_04403045.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21] gi|254285853|ref|ZP_04960815.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|297581499|ref|ZP_06943422.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|150424035|gb|EDN15974.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|229349458|gb|EEO14414.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21] gi|297534337|gb|EFH73175.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 340 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPL+ + +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|332304891|ref|YP_004432742.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172220|gb|AEE21474.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 341 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 150/273 (54%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ P K+E N P DP+ + ++S G++H+Y R+LL + C V CR Sbjct: 67 NPDDPLFRQVFPSKKEFNSDPNYLLDPLQEQSNSK-PGVLHKYQSRVLLLVRGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR S L+ ++ + L YI++ S+I EVI++GGDPL+ L + + + Sbjct: 126 YCFRRHFPYSDNH--LNKQEWQETLDYIRQDSKINEVIYSGGDPLMAKDDFLAWLTEEIA 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ +R H+R+P+V P RI PELI+ + + +H NHP E + + +L Sbjct: 184 QIDHIKRIRIHTRLPVVIPSRITPELIKWFTQTRLKPIMVLHINHPQEIDQSLRDTLQKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+Q VLLK IND + L + + + PYYLH D G HF + Sbjct: 244 TQAGVTLLNQGVLLKDINDSADAQVALSESLFDAGVLPYYLHVMDKVQGAQHFDHEDKIA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + I+A + +++ G P + ++ G GK ID Sbjct: 304 KDIMAQMIKRLPGFLVPKLVREIGGQPGKTPID 336 >gi|28199372|ref|NP_779686.1| hypothetical protein PD1491 [Xylella fastidiosa Temecula1] gi|182682099|ref|YP_001830259.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23] gi|28057478|gb|AAO29335.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|182632209|gb|ACB92985.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23] gi|307578366|gb|ADN62335.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 342 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 99/267 (37%), Positives = 146/267 (54%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E + + D +GD GI+ +Y RILL C V+CR+C Sbjct: 75 HDPLLRQVLPMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYC 134 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR ++ T + EAA A+++ I EVI +GGDPL LS +L ++ LR Sbjct: 135 FRRHFPYAED-TASHDRWREAA-AFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGT 192 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+P+V P+RI+ L++ L PV IHANH EF AA++ L Sbjct: 193 PHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRG 252 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 G LL+Q+VLL+G+ND+ LA L + PYYLH D AGT+H+ + + Sbjct: 253 VGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARART 312 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + A L ++SG P ++ ++PG K Sbjct: 313 LHAELVARLSGYLVPRFVREVPGDSSK 339 >gi|262273034|ref|ZP_06050853.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886] gi|262222944|gb|EEY74250.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886] Length = 340 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 93/282 (32%), Positives = 157/282 (55%), Gaps = 5/282 (1%) Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 N + NP+DP+ RQ +P EE + +P DP+ + + + G++H+Y +R+L+ + Sbjct: 61 NRMEKGNPDDPLLRQVLPVIEEFDEVPGFSTDPLEEQGND-VPGLLHKYKNRVLMIVKGG 119 Query: 105 CPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C + CR+CFRR KG + ++ A+AY+Q+ ++ EVI +GGDPL+ LQ Sbjct: 120 CAINCRYCFRRHFPYQDNKGGKSTWRE---AIAYLQQHPEVDEVILSGGDPLMAKDHELQ 176 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223 +++ + + H++ LR H+R+P+V P R+ L L + + + H NH E +E Sbjct: 177 WLIEAIESVPHIKRLRIHTRLPVVIPSRVTVTLANMLATSRLNIVLVTHINHANEIDDEL 236 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283 A ++ L +AG+ LL+Q VLL+G+ND E L NL + I PYYLH D G +HF Sbjct: 237 RAVMATLKHAGVTLLNQGVLLRGVNDSVEALKNLSNRLFDAGILPYYLHVLDKVKGAAHF 296 Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + E + +++ L +++SG P ++ G K +D H Sbjct: 297 LVDDETARNLMSGLIKEVSGYLVPRLTREIGGRDSKTPLDLH 338 >gi|283834764|ref|ZP_06354505.1| KamA family protein [Citrobacter youngae ATCC 29220] gi|291069009|gb|EFE07118.1| KamA family protein [Citrobacter youngae ATCC 29220] Length = 342 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 149/273 (54%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTAQQEFVAEPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWQVALDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P RI L + + + H NH E E A+ RL Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITEGLADRFAHSSLQILLVNHINHANEVDETFRQAMVRL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 244 RTAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYMVPKLAREIGGEPSKTPLD 336 >gi|254509350|ref|ZP_05121438.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16] gi|219547715|gb|EED24752.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16] Length = 340 Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust. Identities = 99/277 (35%), Positives = 154/277 (55%), Gaps = 7/277 (2%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 NP DP+ RQ +P +E + DP+ + N +P G++H+Y +R L+ + C V C Sbjct: 67 NPYDPLLRQVLPLSQEFEVHEGYSNDPLQEQGNETP--GLLHKYRNRALMIVKGGCAVNC 124 Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 R+CFRR KG L + + L YI+++S++ EVI +GGDPL+ + LQ ++ Sbjct: 125 RYCFRRHFPYQENKGNKLVWQQS---LDYIRQQSELNEVILSGGDPLMAKDEELQWLINH 181 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 + I H++ +R HSR+P+V P RI PEL+ L + V + H NH E + E A+ Sbjct: 182 IADIPHIKRIRIHSRLPVVIPARITPELLAILSGSRLQVIMVTHINHAQEINHELKRAMY 241 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288 L AG+ LL+Q V+LKG+ND E L T + I PYY+H D G +HF ++ + Sbjct: 242 DLKQAGVTLLNQGVMLKGVNDCVEAQVALSETLFDAGILPYYMHVLDKVQGAAHFYISDQ 301 Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + + I+A L E++SG P ++ G K +D H Sbjct: 302 QAKAIMAGLLERVSGYLVPKLTREIGGRKSKTPLDLH 338 >gi|332346225|gb|AEE59559.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 342 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 151/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P R+ L++ + + H NH E E A+++L Sbjct: 184 AIPHIKRLRIHSRLPIVIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 244 RRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDNVQGAAHFMVSDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|271502194|ref|YP_003335220.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii Ech586] gi|270345749|gb|ACZ78514.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii Ech586] Length = 345 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 104/306 (33%), Positives = 161/306 (52%), Gaps = 5/306 (1%) Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78 L K Q+ +E + + + + A + P + DP+ Q + K+E P +DP+ Sbjct: 35 LDKHPQLTAGREARSLFPLRVPRAFAARMRPGDARDPLLLQVLTAKDEFITAPGFSQDPL 94 Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAY 137 D S + G++H+Y +R LL + C V CR+CFRR +G + + AL Y Sbjct: 95 -DEQQSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDY 150 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197 I++ Q+ E+IF+GGDPL+ L +L L I H++ LR H+R+P+V P RI EL Sbjct: 151 IRQHPQLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLRIHTRLPVVIPARITAELC 210 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 Q L ++ V + H NH E + E +++RL AG+ LL+QSVLL+GIND + L L Sbjct: 211 QRLAQSPLQVVLVTHINHANEINAELTDSMARLRRAGVTLLNQSVLLRGINDRVDTLVAL 270 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 + I PYYLH D G +HF + +E + +V L ++SG P ++ G Sbjct: 271 SNALFDAGILPYYLHVLDKVQGAAHFLVPDDEARTLVRGLMTQVSGYLVPNLTREIGGEA 330 Query: 318 GKVKID 323 K +D Sbjct: 331 SKTLLD 336 >gi|229521724|ref|ZP_04411142.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80] gi|229341318|gb|EEO06322.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80] Length = 340 Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPL+ + +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEVNLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTLDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|167627832|ref|YP_001678332.1| lysine 2,3-aminomutase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597833|gb|ABZ87831.1| Lysine 2,3-aminomutase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 328 Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 95/296 (32%), Positives = 156/296 (52%), Gaps = 4/296 (1%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 I+ + + + AN + N NDP+ +Q +P +E I DP+ + N++ + G++ Sbjct: 37 ITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLDEKNYNKVPGLL 96 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R+LL C ++CR+CFR+E K + KD A YI I EVI + Sbjct: 97 HKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRKDWLKAFEYIANDQTIEEVILS 154 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + + L+ ++ ++ I H++ R HSR+P+V P+R+ L++ L E + Sbjct: 155 GGDPLLNNDEVLEFFIENIQRISHIKRFRIHSRIPVVLPERMTNRLLKILSEHRLDTVLV 214 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 IH NHP E + + + GII+L+QS LLK INDD +L L + ++ PYY Sbjct: 215 IHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDINDDANVLYALSTKLINAKVIPYY 274 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 +H D +GT H+ ++ + I+ L E SG P ++PG K + H+ Sbjct: 275 IHSLDTVSGTKHY--NVDCAKDIMKKLSEISSGFMVPILTKEIPGYPSKKWLSFHS 328 >gi|160901658|ref|YP_001567239.1| lysine 2,3-aminomutase [Petrotoga mobilis SJ95] gi|160359302|gb|ABX30916.1| Lysine 2,3-aminomutase [Petrotoga mobilis SJ95] Length = 370 Score = 175 bits (444), Expect = 7e-42, Method: Compositional matrix adjust. Identities = 99/305 (32%), Positives = 168/305 (55%), Gaps = 12/305 (3%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER--EDP 77 I +E++ E++ + Y +LIN + NDPI + IP EEL EE ED Sbjct: 15 ISQEELKELQPVEEKYKFRANEYYLDLINWKDKNDPIRKIIIPSVEEL----EEWGLEDA 70 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 +++++ KG+ H+Y D LL + VC +CRFCFR+ + + V+ +++ + L Y Sbjct: 71 SREHSYTISKGLQHKYRDTALLLVNDVCGSFCRFCFRKRLFKNVGKEVVRTREIDKDLDY 130 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-- 195 I++ +I V+ TGGDPL+LS +L+ +++++ I H++I+R ++ P +P RI + Sbjct: 131 IRKHEEITNVLLTGGDPLLLSTNKLKSIIESINEIDHIKIIRIGTKTPAFNPFRIISDDA 190 Query: 196 ---LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 LI+ + +GK +Y +H NHP E + +I I+ L N+G I+ +Q+ LL GIND+P+ Sbjct: 191 LSNLIKKITNSGKKLYFIVHFNHPRELTSASIQGINILQNSGAIIANQTPLLHGINDNPK 250 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ-PFYIL 311 L+ L + I PYY+ G F + +E+ I E ISGL + P +++ Sbjct: 251 TLSTLFKKLSFNGIPPYYVFQNRPVMGNKGFTIPLEKAYSIFLESLEDISGLAKRPRFVM 310 Query: 312 DLPGG 316 G Sbjct: 311 SHESG 315 >gi|269137690|ref|YP_003294390.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202] gi|267983351|gb|ACY83180.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202] gi|304557746|gb|ADM40410.1| hypothetical protein ETAF_0286 [Edwardsiella tarda FL6-60] Length = 342 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +PNDP+ RQ + E P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 DPNDPLLRQVMSDAAEFIETPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +GT + + A+AY+ E ++ E+IF+GGDPL+ L + L Sbjct: 126 YCFRRHFPYQENQGT---RANWQRAVAYLHEHPELDEIIFSGGDPLMAKDHELDWLFTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 + H++ LR HSR+P+V P R+ L Q + ++ + + H NH E E A+ R Sbjct: 183 EQLPHLRRLRIHSRLPVVIPARVTDALCQRMADSRLQMVLVTHINHANEIDEALSEAMGR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+G+ND + LA L + I PYYLH D G +HF + +E Sbjct: 243 LKQAGVTLLNQSVLLRGVNDSADTLAALSNALFDAGILPYYLHVLDKVQGGAHFMVPDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++++ L ++SG P ++ G K ++D H Sbjct: 303 ARRLMHGLLAQVSGYLVPRLTREIGGEPSKTQLDLH 338 >gi|163783207|ref|ZP_02178201.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1] gi|159881541|gb|EDP75051.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1] Length = 375 Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust. Identities = 100/292 (34%), Positives = 164/292 (56%), Gaps = 10/292 (3%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 +K + +E+K++++ ++ +LIN +P DPI R IP EEL++ + Sbjct: 17 LKDREKEELKQVTDKFAFRTNDYYNSLINWDDPEDPIRRIVIPTTEELDVWGKLHAS--N 74 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 ++ + + G+ H+YPD LL + VC +YCRFCFR+ + + V ++D L YI+ Sbjct: 75 ESKYMKVHGLEHKYPDTALLLVTDVCGIYCRFCFRKRLFMNDNDEV--ARDVSEGLEYIR 132 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197 +I V+ TGGDPL+L+ +L+K LK L I HV+I+R S++ V+P R+ +P L+ Sbjct: 133 NHPEINNVLLTGGDPLVLATFKLEKTLKALAEIPHVRIVRIGSKMLAVNPFRVIDDPSLL 192 Query: 198 QCLK----EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 + + E GK +Y+ H NHP E ++EA A+ + G L +Q+ +LKGIND+ E Sbjct: 193 ELFEWFNTETGKKLYLMNHFNHPRELTKEARKAVELVQKTGTTLTNQTPILKGINDNEET 252 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 L L+ + + PYY+ AG + IEE +V S++ K+SGL Sbjct: 253 LRELLEELSFMGVPPYYVFQCRPTAGNKTYSTKIEETIDLVESVRSKVSGLA 304 >gi|15804738|ref|NP_290779.1| hypothetical protein Z5751 [Escherichia coli O157:H7 EDL933] gi|12519128|gb|AAG59345.1|AE005648_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] Length = 342 Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDP + L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPXMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ R HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRXRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|74314635|ref|YP_313054.1| hypothetical protein SSON_4330 [Shigella sonnei Ss046] gi|73858112|gb|AAZ90819.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 342 Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DPI RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPILRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|59712946|ref|YP_205722.1| lysine aminomutase [Vibrio fischeri ES114] gi|59481047|gb|AAW86834.1| predicted lysine aminomutase [Vibrio fischeri ES114] Length = 340 Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 153/276 (55%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P +E + DP+ + ++ L G++H+Y +R+LL + C V CR Sbjct: 67 NPFDPLLRQVLPLDQEFEVHEGYSNDPLEEQDNQQL-GLLHKYKNRVLLIVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + ++ YI +I EVIF+GGDPL+ LQ ++ + Sbjct: 126 YCFRRHFPYQDNKG---SKTIWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIDHI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI L Q + + + H NH E ++E I+++ + Sbjct: 183 EAIPHIKRLRIHSRLPVVIPNRITDTLCQLFTKTRLQIILVTHINHANEINQELISSMHK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L A + LL+QSVLLKG+ND+ + L L + I PYYLH D G +HF ++ E+ Sbjct: 243 LKLAHVTLLNQSVLLKGVNDNADTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDEK 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 +++++ L E +SG P ++ G K +D + Sbjct: 303 AKQLMSELIENVSGYLVPTLAREIGGRKSKTPLDLY 338 >gi|27364664|ref|NP_760192.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6] gi|27360809|gb|AAO09719.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6] Length = 340 Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 99/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ +P EE I P DP+ + +++ + G++H+Y +R L+ + C + CR Sbjct: 67 NPNDPLLRQVLPVSEEHEIHPGYSVDPLEEQDNA-IPGLLHKYHNRALMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + S + EVIF+GGDPL+ LQ +++ + Sbjct: 126 YCFRRHFPYQDNKG---SKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI L Q L++ V + H NH E + E + + R Sbjct: 183 ADIPHIKRLRIHSRLPVVIPARITTALCQLLEQTRLQVILVTHINHANEINAELTSQLHR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+Q VLLKG+ND E +L + I PYYLH D G +HF ++ +E Sbjct: 243 LKRIGVTLLNQGVLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + I+ L ++SG P ++ G K +D + Sbjct: 303 AKAIMHGLITQVSGYLVPTLTREIGGRPSKTPLDLY 338 >gi|71066234|ref|YP_264961.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4] gi|71039219|gb|AAZ19527.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4] Length = 335 Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 151/276 (54%), Gaps = 2/276 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P ++E + DP+ +N H+P+KG++H+Y R+LL L C ++CR+C Sbjct: 62 DDPLLRQVLPHQKERITVAGYVADPLAENAHNPVKGVLHKYQSRLLLTLTGACAIHCRYC 121 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FR+ S S+K + + YI +I E+I +GGDPL ++++RL L TL I Sbjct: 122 FRQHFDYSANMPTASAK--QDIIDYISAHPEINEIILSGGDPLNVTNRRLFAWLDTLEAI 179 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 + + +R H+R+P+V P R++ L++ L ++ + + IH NH E + R Sbjct: 180 EQLTTIRIHTRLPLVIPARLDDALLERLAQSCCQIVMVIHGNHANEIDTLTAEYLRRARA 239 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AGI LL+Q+VLLKGIND L + + PYYLH D AG +HF + Sbjct: 240 AGITLLNQAVLLKGINDSVSAQMALSQRLFAAGVLPYYLHVLDKVAGAAHFDRDERSAIE 299 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIK 328 + SL K+ G P + +LP KV I+ +N K Sbjct: 300 LYWSLLAKLPGYLVPKLVRELPNKPFKVPINVYNDK 335 >gi|260913742|ref|ZP_05920218.1| KamA family protein [Pasteurella dagmatis ATCC 43325] gi|260632281|gb|EEX50456.1| KamA family protein [Pasteurella dagmatis ATCC 43325] Length = 337 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 101/258 (39%), Positives = 141/258 (54%), Gaps = 5/258 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ Q + +E + DP+ + + + ++H+Y +R+LL + C V CR Sbjct: 67 NPKDPLFLQVMSSADEFIQVEGFTTDPL-EEQEAVVPSVLHKYHNRLLLMVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + + AL YI + +I EVIF+GGDPL+ L ++K L Sbjct: 126 YCFRRHFPYADNKG---NKVNWQKALDYIAIRPEIEEVIFSGGDPLMAKDHELNWLIKNL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H+Q LR H+R+P+V PQRI PEL + L E+ + H NHP E AAI + Sbjct: 183 ENIPHLQRLRIHTRLPVVIPQRITPELCKILSESRFQTVLVTHINHPNEIDTTLSAAIFK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG++LL+QSVLLK INDD +IL L + I PYYLH D G SHF + E+ Sbjct: 243 LKQAGVVLLNQSVLLKNINDDAQILKQLSDKLFSINILPYYLHLLDKVEGASHFYIEDEK 302 Query: 290 GQKIVASLKEKISGLCQP 307 I L+ SG P Sbjct: 303 ALNIYKILQSITSGYLVP 320 >gi|327485135|gb|AEA79542.1| Lysine 2,3-aminomutase [Vibrio cholerae LMA3894-4] Length = 340 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 152/276 (55%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPADPLLRQVLPLSAEFVIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPL+ + +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|323166756|gb|EFZ52513.1| kamA family protein [Shigella sonnei 53G] Length = 320 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DPI RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 45 NPDDPILRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 103 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 104 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 160 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 161 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 220 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 221 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 280 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 281 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 314 >gi|183598065|ref|ZP_02959558.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827] gi|188022847|gb|EDU60887.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827] Length = 342 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 152/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P DP+ Q + K E + P DP+ + N++ + ++H+Y +R L+ + C V CR Sbjct: 67 DPQDPLLLQVLTAKAEFDTYPGFSTDPLDEQNNA-IPSLLHKYHNRALMLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + A+ YI+ +++ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYEDNKG---NKNNWLIAVDYIKNHTELNEIIFSGGDPLMAKDSELDWLIGQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P+RI L Q L + V + H NH E + AA+ + Sbjct: 183 EAIPHIKRLRIHSRLPVVIPERITTNLCQRLAHSRLQVIMVTHLNHANEIDDHFKAAMQK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L NAG+ LL+QSVLL+G+N+D + LANL + I PYYLH D G +HF ++ +E Sbjct: 243 LKNAGVTLLNQSVLLRGVNNDADTLANLSNALFDAGILPYYLHVLDKVQGAAHFLVSDQE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + ++ L K+SG P ++ G K +D Sbjct: 303 ARLLIQQLLGKVSGYLVPKLAREIGGEPSKTLLD 336 >gi|229527414|ref|ZP_04416806.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)] gi|229335046|gb|EEO00531.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)] Length = 340 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 151/276 (54%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVI +GGDPL+ L +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVEMFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|238757499|ref|ZP_04618684.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC 35236] gi|238704261|gb|EEP96793.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC 35236] Length = 284 Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/284 (33%), Positives = 155/284 (54%), Gaps = 5/284 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P NP+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 1 MQPGNPSDPLLLQVLTAQEEFITAPGFTTDPL-DEQRSVVPGLLHKYRNRALLLVKSGCA 59 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ + L + Sbjct: 60 VNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHPELDEIIFSGGDPLMANDSELSWL 116 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L + I H++ LR H+R+P+V P RI L Q L + V + H NH E + Sbjct: 117 LDEIESISHIKRLRIHTRLPVVIPARITANLCQRLSNSRLQVLMVTHINHANEIDQSLRN 176 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 ++++L AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF + Sbjct: 177 SMAQLKRAGVTLLNQSVLLRGVNNDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMV 236 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 +E ++++ L ++SG P ++ G K +D I+ Sbjct: 237 DDDEARQLMKGLLSRVSGYLVPRLTREIGGEPSKTPLDLRLIQS 280 >gi|308189049|ref|YP_003933180.1| hypothetical protein Pvag_3613 [Pantoea vagans C9-1] gi|308059559|gb|ADO11731.1| Uncharacterized kamA family protein [Pantoea vagans C9-1] Length = 342 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 98/273 (35%), Positives = 152/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + +DP+ Q + +++E P DP+ D + + G++H+Y +R LL + C V CR Sbjct: 67 DAHDPLLLQVLTRRQEFIDAPGYSTDPL-DEQSNVVPGLLHKYRNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + +AAL YI + ++ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHF--PYQDNPGNKRSWQAALDYIADHPELDEIIFSGGDPLMAKDHELAWLIAALE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+P+V P RI +L Q L E V + H NH E +E A+S L Sbjct: 184 KIPHLKRLRIHSRLPVVIPARITDQLCQMLSETRLQVLMVTHINHAQEIDDELREAMSSL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+QSVLL+GIND+ + LA L + I PYYLH D G +HF ++ EE Sbjct: 244 KRAGVTLLNQSVLLRGINDNSQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +++V +L ++SG P ++ G K +D Sbjct: 304 RQLVRALLSQVSGYLVPKLAREIGGEPSKTPLD 336 >gi|114319844|ref|YP_741527.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1] gi|114226238|gb|ABI56037.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1] Length = 348 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/242 (39%), Positives = 135/242 (55%), Gaps = 7/242 (2%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I P +P+DP+ RQ +P E DP+GD G++H+Y R+LL C Sbjct: 61 IRPGDPDDPLLRQVLPLAAEHETPAGFTADPVGDAAAEANPGLLHKYHGRVLLITTGACA 120 Query: 107 VYCRFCFRREM--VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 ++CR+CFRR SQ G D A LA++ ++ EVI +GGDPL LS +RL Sbjct: 121 IHCRYCFRRHFPYTESQAG----RDDWRATLAWLDAHPEVDEVILSGGDPLTLSDRRLAT 176 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224 + + L V+ LR H+R+P+V P RI P L+ LK + V++ IH+NH E Sbjct: 177 LTEALAQRPQVRRLRLHTRLPVVLPDRITPGLMALLKGPWEVVWV-IHSNHAQELDSTVA 235 Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284 A++RL AG LL+Q+VLL+ INDD + LA L R +L + PYYLH D G +HF Sbjct: 236 GALARLREAGHWLLNQTVLLRRINDDADTLAALSRQLFQLGVLPYYLHLLDRVQGAAHFE 295 Query: 285 LT 286 +T Sbjct: 296 VT 297 >gi|294495163|ref|YP_003541656.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219] gi|292666162|gb|ADE36011.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219] Length = 358 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/300 (32%), Positives = 174/300 (58%), Gaps = 11/300 (3%) Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77 NL + E+ + IK + H+ TP A+L++ +P PI +Q +P +E + ++ Sbjct: 24 NLTESER-EAIKTLDTHW--GTTPYFASLMDKDDPECPIRKQVVPSLQESHNKYGMKDYL 80 Query: 78 IGDNNHSPLK----GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 + N + + I +Y DR+ + C +YCR CFR+E+V S + + + Sbjct: 81 VWKENRATEEVRPDSIARQYKDRVAFTVFQECGIYCRHCFRKELVVSHDLKL--DFNVDD 138 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 + +I++ ++ +V+ TGGDPL+LS ++++ ++++LR I HV+++R SR+PIV P RI Sbjct: 139 GIEWIRQHPEVRDVLITGGDPLLLSDEKIEYIIESLRDIPHVEMIRIGSRLPIVLPHRIT 198 Query: 194 PELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 L + L P+++ NHP E +++ A+ L +AG+ + +Q+VLLKGINDD + Sbjct: 199 DNLKRILGGYHDVPIWLNTQCNHPKEITDKTKRAVYDLVSAGVNVGNQAVLLKGINDDVQ 258 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKISGLCQPFYIL 311 + +L + + RI+PYYL + + A G HFR +E+G +++ L+ +GL QP Y++ Sbjct: 259 TIRDLHQKLLTARIRPYYLFYCEPAPGIDHFRTPVEKGAELIRDGLRGHTTGLAQPMYVI 318 >gi|258620467|ref|ZP_05715505.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258587346|gb|EEW12057.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 340 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 98/276 (35%), Positives = 151/276 (54%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E + P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPYDPLLRQVLPLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 ATIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+N+ E L T + I PYYLH D G +HF ++ +E Sbjct: 243 LRAVNVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 ARQIMAGLIERVSGYLIPKLTREIGGKPSKTPLDLH 338 >gi|89902650|ref|YP_525121.1| hypothetical protein Rfer_3891 [Rhodoferax ferrireducens T118] gi|89347387|gb|ABD71590.1| L-lysine 2,3-aminomutase [Rhodoferax ferrireducens T118] Length = 393 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 101/309 (32%), Positives = 165/309 (53%), Gaps = 6/309 (1%) Query: 25 IDEIKE-ISNHYSIALTPVIANLINPHNPNDPIARQFIPQK-EELNILPEEREDPIGDNN 82 I+ + E + ++IA+TP +A L++ +PN PI Q++P EE D +G+ Sbjct: 50 IENVNETVYKKFAIAITPYMAKLMDRDDPNCPIRLQYLPSHFEETKPGFATSLDQLGEEG 109 Query: 83 HS-PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 + P +VHRYP R+L + + C CRFC R+ MV G+V + + EA++ YI Sbjct: 110 DTVPGTSVVHRYPRRVLFLVSNTCATLCRFCTRKRMVSQPDGSV-AKDEIEASIDYIAGN 168 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCL 200 I +V+ +GGDP + +RL +L LR HV+ LR SR+ + P R+ PEL L Sbjct: 169 QDIEDVLLSGGDPFTFTDERLDYILGELRRRAPHVRFLRIGSRMVVQMPTRVTPELCAVL 228 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 E + + IH NHP E + + + AGI++ Q+V LKG+NDD ++ L Sbjct: 229 -EKHRVQMVNIHINHPKEITPLLRERVKMIQKAGIMMGLQTVCLKGVNDDVAVMRELFMQ 287 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 +E+ ++PYY++ D+ G HF + ++ L+ ISG P +++D GG GK+ Sbjct: 288 TIEMGVRPYYVYSTDMVEGAHHFIVPHRRMLELYEGLRGWISGPAIPTFVVDGLGGLGKL 347 Query: 321 KIDTHNIKK 329 I +++ Sbjct: 348 PITPSYVRE 356 >gi|330906439|ref|XP_003295474.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1] gi|311333210|gb|EFQ96428.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1] Length = 526 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 104/320 (32%), Positives = 172/320 (53%), Gaps = 22/320 (6%) Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91 +I LTP + +L++ P +DPI +QF+P + I+P+ + D + + + SP+ G+VH Sbjct: 114 AIRLTPHVLSLVDWTKPLDDPIRKQFLPLRS--GIIPDHKHLELDSLHEEDDSPVPGLVH 171 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL------SSKDTEAALAYIQEKSQIW 145 RYP R L +CPVYCRFC R VG+ TV S K E +I++ + Sbjct: 172 RYPGRALFLATSICPVYCRFCTRSYAVGANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQ 231 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI----NP------E 195 +++ +GGD L +++++ L I H++ +R S+ V P RI +P E Sbjct: 232 DIVVSGGDAYFLQPDHVKEIVYRLLNIPHIRRIRLASKGLAVAPGRILDDADPWTDALIE 291 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + +E GK V + H NH E + A ++L G+I+ +QSVLLKG+N+ + L Sbjct: 292 VSNKGREMGKQVCLHTHINHANEITWITRLAANKLFKHGVIVRNQSVLLKGVNNHKDTLL 351 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 +L++T ++ I+PYY++ D+ G R ++E + L+ K+SG P +++DLPG Sbjct: 352 DLIKTLADINIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKDLRGKLSGFMMPSFVIDLPG 411 Query: 316 GYGKVKIDTHNIKKVGNGSY 335 G GK + T K G +Y Sbjct: 412 GGGKRLVSTVESYKNGEATY 431 >gi|93006773|ref|YP_581210.1| hypothetical protein Pcryo_1949 [Psychrobacter cryohalolentis K5] gi|92394451|gb|ABE75726.1| L-lysine 2,3-aminomutase [Psychrobacter cryohalolentis K5] Length = 335 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 2/276 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P +E + DP+ +N H+P+KG++H+Y R+LL + C ++CR+C Sbjct: 62 DDPLLRQVLPNHKEQMAVAGYVADPLAENAHNPVKGVLHKYQSRLLLTITGACAIHCRYC 121 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FR+ S S+K + + YI +I EVI +GGDPL ++++RL L TL I Sbjct: 122 FRQHFDYSANMPTASAK--QDIIDYISAHPEINEVILSGGDPLNVTNRRLFAWLDTLEAI 179 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 + +R H+R+P+V P R++ L++ L ++ + + IH NH E + R Sbjct: 180 GQLTTIRIHTRLPLVIPARLDDALLERLAQSRCQIVMVIHGNHANEIDALTAEYLQRARA 239 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AGI LL+Q+VLLKGIND L + + PYYLH D AG +HF E + Sbjct: 240 AGITLLNQAVLLKGINDSVSAQTALSQRLFAAGVLPYYLHVLDKVAGAAHFDSDEEFAIE 299 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIK 328 + SL K+ G P + +LP KV I+ +N K Sbjct: 300 LYWSLLAKLPGYLVPKLVRELPNEPFKVPINVYNNK 335 >gi|238796052|ref|ZP_04639563.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC 43969] gi|238719997|gb|EEQ11802.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC 43969] Length = 335 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/278 (34%), Positives = 153/278 (55%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P +P+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 55 MQPGDPSDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L + Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWL 170 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L L I H++ LR H+R+P+V P RI L Q L ++ V + H NH E + Sbjct: 171 LDELESISHIKRLRIHTRLPVVIPARITAALCQRLGDSRLQVLMVTHINHTNEIDQSLRD 230 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 ++++L AG+ LL+QSVLL+G+NDD ++LA L + I PYY+H D G +HF + Sbjct: 231 SMAQLKQAGVTLLNQSVLLRGVNDDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMV 290 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E ++++ L ++SG P ++ G K +D Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 328 >gi|85058286|ref|YP_453988.1| hypothetical protein SG0308 [Sodalis glossinidius str. 'morsitans'] gi|84778806|dbj|BAE73583.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 342 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 148/273 (54%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P+DP+ RQ I +EE + P DP+ D HS + G++H+Y +R L+ + C V CR Sbjct: 67 DPDDPLLRQVITAREEFDPTPGYSTDPL-DEQHSVVPGLLHKYQNRALMLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + A AYI++ ++ E+I +GGDPL+ L +++ L Sbjct: 126 YCFRRHFPYQENQG--NKTNWLRAAAYIRQHPELNEIILSGGDPLMAKDHELDELICLLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+P+V P RI L Q L V + H NH E +++RL Sbjct: 184 EIPHLKTLRIHSRLPVVIPARITARLCQRLAGCRLKVVLVTHINHAREIDAALCDSMTRL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 NA + LL+QSVLL+G+ND + LA L I PYYLH D G +HF + ++ Sbjct: 244 RNARVTLLNQSVLLRGVNDSADTLAALSEALFAAGILPYYLHVLDRVQGAAHFMVEDKQA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L EK+SG P ++ G K +D Sbjct: 304 REIMQQLLEKVSGYLVPRLAREIGGERSKTPLD 336 >gi|30065523|ref|NP_839694.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T] gi|30043787|gb|AAP19506.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T] gi|281603612|gb|ADA76596.1| KamA family protein [Shigella flexneri 2002017] gi|313646382|gb|EFS10844.1| kamA family protein [Shigella flexneri 2a str. 2457T] gi|332749021|gb|EGJ79444.1| kamA family protein [Shigella flexneri K-671] gi|332749289|gb|EGJ79710.1| kamA family protein [Shigella flexneri 4343-70] gi|332761892|gb|EGJ92166.1| kamA family protein [Shigella flexneri 2747-71] gi|332763192|gb|EGJ93435.1| kamA family protein [Shigella flexneri 2930-71] gi|333009379|gb|EGK28835.1| kamA family protein [Shigella flexneri K-218] gi|333011918|gb|EGK31303.1| kamA family protein [Shigella flexneri K-304] Length = 342 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|193067826|ref|ZP_03048792.1| KamA family protein [Escherichia coli E110019] gi|192958801|gb|EDV89238.1| KamA family protein [Escherichia coli E110019] Length = 342 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|333012676|gb|EGK32056.1| kamA family protein [Shigella flexneri K-227] Length = 342 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGKPSKTPLD 336 >gi|118497318|ref|YP_898368.1| hypothetical protein FTN_0722 [Francisella tularensis subsp. novicida U112] gi|195536004|ref|ZP_03079011.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis subsp. novicida FTE] gi|118423224|gb|ABK89614.1| aminomutase [Francisella novicida U112] gi|194372481|gb|EDX27192.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis subsp. novicida FTE] Length = 328 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 95/284 (33%), Positives = 151/284 (53%), Gaps = 4/284 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A+ + N NDP+ +Q +P +E I DP+ + N++ + G++H+Y R+LL Sbjct: 49 FADRMQKGNINDPLLKQVLPTIDEEVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQ 108 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C V+CR+CFR+E K + KD A YI I EVI +GGDPL+ + + L Sbjct: 109 TSCAVHCRYCFRKEF--DYKENIPGRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEIL 166 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 + ++ ++ I H++ LR H+R+PIV P+R+ +L++ L E + IH NHP E Sbjct: 167 EFFIENIQRIAHIKRLRIHTRIPIVLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGN 226 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 + + GII L+QS LLK INDD +L L + ++ PYY+H D +GT H Sbjct: 227 VSKVLKEIHKHGIITLNQSTLLKYINDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKH 286 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 + ++ + I+ L E SG P ++PG K + H+ Sbjct: 287 Y--NVDNAKDIMKKLSEISSGFMVPVLTKEIPGYPSKKWLSFHS 328 >gi|15642656|ref|NP_232289.1| hypothetical protein VC2661 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590925|ref|ZP_01678247.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121727598|ref|ZP_01680706.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147674649|ref|YP_001218151.1| hypothetical protein VC0395_A2235 [Vibrio cholerae O395] gi|153819801|ref|ZP_01972468.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153821563|ref|ZP_01974230.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227082777|ref|YP_002811328.1| hypothetical protein VCM66_2581 [Vibrio cholerae M66-2] gi|229507290|ref|ZP_04396795.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286] gi|229509786|ref|ZP_04399267.1| lysine 2,3-aminomutase [Vibrio cholerae B33] gi|229516911|ref|ZP_04406357.1| lysine 2,3-aminomutase [Vibrio cholerae RC9] gi|229606796|ref|YP_002877444.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236] gi|254225400|ref|ZP_04919011.1| conserved hypothetical protein [Vibrio cholerae V51] gi|254851197|ref|ZP_05240547.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744377|ref|ZP_05418329.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101] gi|262158513|ref|ZP_06029628.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1] gi|262170093|ref|ZP_06037782.1| lysine 2,3-aminomutase [Vibrio cholerae RC27] gi|298500520|ref|ZP_07010324.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657254|gb|AAF95802.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547247|gb|EAX57371.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121630089|gb|EAX62494.1| conserved hypothetical protein [Vibrio cholerae V52] gi|125622034|gb|EAZ50357.1| conserved hypothetical protein [Vibrio cholerae V51] gi|126509662|gb|EAZ72256.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126520948|gb|EAZ78171.1| conserved hypothetical protein [Vibrio cholerae B33] gi|146316532|gb|ABQ21071.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227010665|gb|ACP06877.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227014549|gb|ACP10759.1| conserved hypothetical protein [Vibrio cholerae O395] gi|229345974|gb|EEO10946.1| lysine 2,3-aminomutase [Vibrio cholerae RC9] gi|229353260|gb|EEO18199.1| lysine 2,3-aminomutase [Vibrio cholerae B33] gi|229354795|gb|EEO19716.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286] gi|229369451|gb|ACQ59874.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236] gi|254846902|gb|EET25316.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255737902|gb|EET93295.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101] gi|262021501|gb|EEY40213.1| lysine 2,3-aminomutase [Vibrio cholerae RC27] gi|262029674|gb|EEY48323.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1] gi|297540689|gb|EFH76746.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 340 Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 151/276 (54%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + +L YI + Q+ EVIF+GGDPL+ + +++ + Sbjct: 126 YCFRRHFPYEDNKG---GKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|170766549|ref|ZP_02901002.1| KamA family protein [Escherichia albertii TW07627] gi|170123987|gb|EDS92918.1| KamA family protein [Escherichia albertii TW07627] gi|315617559|gb|EFU98165.1| kamA family protein [Escherichia coli 3431] Length = 342 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEYIAAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWKVALEYVAAHPELDEIIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 ETIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|157156524|ref|YP_001465646.1| KamA family protein [Escherichia coli E24377A] gi|157163612|ref|YP_001460930.1| KamA family protein [Escherichia coli HS] gi|191165672|ref|ZP_03027512.1| KamA family protein [Escherichia coli B7A] gi|193065734|ref|ZP_03046798.1| KamA family protein [Escherichia coli E22] gi|194428975|ref|ZP_03061508.1| KamA family protein [Escherichia coli B171] gi|209921637|ref|YP_002295721.1| hypothetical protein ECSE_4446 [Escherichia coli SE11] gi|218556701|ref|YP_002389615.1| putative lysine aminomutase [Escherichia coli IAI1] gi|218697896|ref|YP_002405563.1| putative lysine aminomutase [Escherichia coli 55989] gi|256019792|ref|ZP_05433657.1| putative lysine aminomutase [Shigella sp. D9] gi|260846979|ref|YP_003224757.1| putative lysine aminomutase [Escherichia coli O103:H2 str. 12009] gi|260858300|ref|YP_003232191.1| putative lysine aminomutase [Escherichia coli O26:H11 str. 11368] gi|260870945|ref|YP_003237347.1| putative lysine aminomutase [Escherichia coli O111:H- str. 11128] gi|293476459|ref|ZP_06664867.1| kamA family protein yjeK [Escherichia coli B088] gi|300816554|ref|ZP_07096775.1| KamA family protein [Escherichia coli MS 107-1] gi|300821239|ref|ZP_07101387.1| KamA family protein [Escherichia coli MS 119-7] gi|300905975|ref|ZP_07123700.1| KamA family protein [Escherichia coli MS 84-1] gi|300922447|ref|ZP_07138566.1| KamA family protein [Escherichia coli MS 182-1] gi|301302564|ref|ZP_07208694.1| KamA family protein [Escherichia coli MS 124-1] gi|301325908|ref|ZP_07219331.1| KamA family protein [Escherichia coli MS 78-1] gi|307312017|ref|ZP_07591654.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W] gi|309796959|ref|ZP_07691359.1| KamA family protein [Escherichia coli MS 145-7] gi|331671054|ref|ZP_08371887.1| putative radical SAM domain protein [Escherichia coli TA271] gi|331680279|ref|ZP_08380938.1| putative radical SAM domain protein [Escherichia coli H591] gi|332280930|ref|ZP_08393343.1| KamA family protein [Shigella sp. D9] gi|157069292|gb|ABV08547.1| KamA family protein [Escherichia coli HS] gi|157078554|gb|ABV18262.1| KamA family protein [Escherichia coli E24377A] gi|190904367|gb|EDV64076.1| KamA family protein [Escherichia coli B7A] gi|192926603|gb|EDV81233.1| KamA family protein [Escherichia coli E22] gi|194413028|gb|EDX29317.1| KamA family protein [Escherichia coli B171] gi|209914896|dbj|BAG79970.1| conserved hypothetical protein [Escherichia coli SE11] gi|218354628|emb|CAV01600.1| putative lysine aminomutase [Escherichia coli 55989] gi|218363470|emb|CAR01124.1| putative lysine aminomutase [Escherichia coli IAI1] gi|257756949|dbj|BAI28451.1| predicted lysine aminomutase [Escherichia coli O26:H11 str. 11368] gi|257762126|dbj|BAI33623.1| predicted lysine aminomutase [Escherichia coli O103:H2 str. 12009] gi|257767301|dbj|BAI38796.1| predicted lysine aminomutase [Escherichia coli O111:H- str. 11128] gi|291320912|gb|EFE60354.1| kamA family protein yjeK [Escherichia coli B088] gi|300402209|gb|EFJ85747.1| KamA family protein [Escherichia coli MS 84-1] gi|300421205|gb|EFK04516.1| KamA family protein [Escherichia coli MS 182-1] gi|300526128|gb|EFK47197.1| KamA family protein [Escherichia coli MS 119-7] gi|300530784|gb|EFK51846.1| KamA family protein [Escherichia coli MS 107-1] gi|300842089|gb|EFK69849.1| KamA family protein [Escherichia coli MS 124-1] gi|300847324|gb|EFK75084.1| KamA family protein [Escherichia coli MS 78-1] gi|306907824|gb|EFN38325.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W] gi|308119372|gb|EFO56634.1| KamA family protein [Escherichia coli MS 145-7] gi|315063463|gb|ADT77790.1| predicted lysine aminomutase [Escherichia coli W] gi|315255490|gb|EFU35458.1| KamA family protein [Escherichia coli MS 85-1] gi|320200721|gb|EFW75307.1| Lysine 2,3-aminomutase [Escherichia coli EC4100B] gi|323156036|gb|EFZ42198.1| kamA family protein [Escherichia coli EPECa14] gi|323171580|gb|EFZ57226.1| kamA family protein [Escherichia coli LT-68] gi|323182253|gb|EFZ67663.1| kamA family protein [Escherichia coli 1357] gi|323946085|gb|EGB42121.1| KamA family protein [Escherichia coli H120] gi|324019385|gb|EGB88604.1| KamA family protein [Escherichia coli MS 117-3] gi|324118714|gb|EGC12606.1| KamA family protein [Escherichia coli E1167] gi|331061643|gb|EGI33569.1| putative radical SAM domain protein [Escherichia coli TA271] gi|331071742|gb|EGI43078.1| putative radical SAM domain protein [Escherichia coli H591] gi|332103282|gb|EGJ06628.1| KamA family protein [Shigella sp. D9] gi|333010296|gb|EGK29729.1| kamA family protein [Shigella flexneri VA-6] Length = 342 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|262170406|ref|ZP_06038084.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451] gi|261891482|gb|EEY37468.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451] Length = 340 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 151/276 (54%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E + P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPYDPLLRQVLPLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 ATIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+N+ E L T + I PYYLH D G +HF ++ +E Sbjct: 243 LRAVNVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++++A L E++SG P ++ G K +D H Sbjct: 303 ARQLMAGLIERVSGYLVPKLTREIGGKPSKTPLDLH 338 >gi|24115503|ref|NP_710013.1| hypothetical protein SF4302 [Shigella flexneri 2a str. 301] gi|24054828|gb|AAN45720.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] Length = 342 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|331681166|ref|ZP_08381803.1| putative radical SAM domain protein [Escherichia coli H299] gi|331081387|gb|EGI52548.1| putative radical SAM domain protein [Escherichia coli H299] Length = 342 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/273 (34%), Positives = 151/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + +EE + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQEEYIVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++L Sbjct: 184 AIPHIKRLRIHSRLPIVIPARITDALVERFAHSTLQILLVNHINHANEVDETFRQAMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 G+ L+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 244 RRVGVTQLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFVVSDDEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 304 RQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|323176095|gb|EFZ61687.1| kamA family protein [Escherichia coli 1180] gi|333011130|gb|EGK30544.1| kamA family protein [Shigella flexneri K-272] Length = 320 Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 45 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 103 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 104 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 160 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 161 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 220 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 221 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 280 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 281 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 314 >gi|153213997|ref|ZP_01949190.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124115567|gb|EAY34387.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 340 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVI +GGDPL+ L +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+ND + L T + I PYYLH D G +HF ++ ++ Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|153829470|ref|ZP_01982137.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148875053|gb|EDL73188.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 340 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 152/276 (55%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPL+ + +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D + Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLY 338 >gi|71278705|ref|YP_267720.1| hypothetical protein CPS_0971 [Colwellia psychrerythraea 34H] gi|71144445|gb|AAZ24918.1| conserved hypothetical protein TIGR00238 [Colwellia psychrerythraea 34H] Length = 342 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 93/271 (34%), Positives = 150/271 (55%), Gaps = 3/271 (1%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ +Q +P E + DP+ +++ + +G++H+Y R+L+ + C + CR+C Sbjct: 73 DDPLLKQVMPLSSEFLLSDGYTADPLNEHD-TVAEGLLHKYKSRVLMIVKTACAINCRYC 131 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR + K ++AL YI ++I EVIF+GGDPL+ + L +++ + I Sbjct: 132 FRRHFPYQDNSP--NKKRWQSALDYIAAHNEISEVIFSGGDPLMANDDHLAWLIEQIEQI 189 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 HV LR HSR+P+V P RI +L+ LK + + +H NHP E ++E I A+ L Sbjct: 190 PHVSRLRIHSRLPVVIPNRITAKLVTLLKCSRLKATMVLHINHPNEINQELIEALEPLRE 249 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 A I L +QSVLL+GINDD ++L NL + I+PYYLH D G +HF + + Sbjct: 250 ARIPLFNQSVLLRGINDDAQVLINLSEALFDAGIQPYYLHLFDAVQGAAHFDIAEADAVA 309 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKID 323 IV ++ + G P + ++ G K I+ Sbjct: 310 IVKTMLASLPGFLMPKLVREIAGQANKTPIN 340 >gi|268323643|emb|CBH37231.1| conserved hypothetical protein [uncultured archaeon] Length = 366 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 95/287 (33%), Positives = 163/287 (56%), Gaps = 10/287 (3%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 ++EI + + + +T +L++ ++P+DPI + +P +EELN++ D G+ ++ + Sbjct: 31 LQEIIDRHPMRITRYYLSLLDENDPDDPIRKMAVPSEEELNLVGSY--DTSGERENTIMP 88 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 G+ H+Y L+ + C +YCR+CFR+ +VG ++ + A YI+E +I V Sbjct: 89 GLQHKYAQTALILATNKCAMYCRYCFRKRLVGLPTKEIMHRFN--GAAKYIEEHEEINNV 146 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--- 204 + +GGDP ILS L + L+ L I H+ +RF +RVP+ P RI + Sbjct: 147 LISGGDPFILSTVVLSEFLERLSDILHLDFIRFGTRVPVTFPDRILKDDKLLTLLGNNSH 206 Query: 205 --KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 + +Y+ NHP E + +A A+SRL AG+I+ +Q+VLLKG+NDDPE LA L V Sbjct: 207 ENRRIYVVTQFNHPREITAKATGAVSRLIRAGVIVDNQTVLLKGVNDDPETLAELQNKLV 266 Query: 263 ELRIKPYYLHHPD-LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 + + PYYL + S+F++ + +G +IV + KE+++G + F Sbjct: 267 SIGVIPYYLFQCRPVKRVKSYFQVPLYKGYEIVEAAKERLNGHSKRF 313 >gi|197334541|ref|YP_002157135.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11] gi|197316031|gb|ACH65478.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11] Length = 340 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 97/277 (35%), Positives = 153/277 (55%), Gaps = 7/277 (2%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 NP DP+ RQ +P +E + DP+ + +N P G++H+Y +R+LL + C V C Sbjct: 67 NPFDPLLRQVLPLDQEFEVHEGYSNDPLEEQDNDQP--GLLHKYKNRVLLIVKGGCAVNC 124 Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 R+CFRR KG S + ++ YI +I EVIF+GGDPL+ LQ +++ Sbjct: 125 RYCFRRHFPYQDNKG---SKTVWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIEH 181 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 + I H++ LR HSR+P+V P RI L Q K+ + + H NH E ++ I+++ Sbjct: 182 IEAIPHIKRLRIHSRLPVVIPNRITDTLCQLFKKTRLQIILVTHINHANEINQTLISSMK 241 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288 +L A + LL+QSVLLKG+ND+ + L L + I PYYLH D G +HF ++ E Sbjct: 242 KLKLAHVTLLNQSVLLKGVNDNTDTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDE 301 Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + ++++ L E +SG P ++ G K +D + Sbjct: 302 KAKQLMGELIENVSGYLVPTLAREIGGRKSKTPLDLY 338 >gi|229524637|ref|ZP_04414042.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426] gi|229338218|gb|EEO03235.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426] Length = 340 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E I P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPADPLLRQVLPLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPL+ + +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+A L E++SG P ++ G K +D Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLD 336 >gi|189200174|ref|XP_001936424.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983523|gb|EDU49011.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 443 Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust. Identities = 103/320 (32%), Positives = 172/320 (53%), Gaps = 22/320 (6%) Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91 +I LTP + +L++ P +DPI +QF+P + I+P+ + D + + + SP+ G+VH Sbjct: 31 AIRLTPHVLSLVDWTKPLDDPIRKQFLPLRS--GIIPDHKHLELDSLHEEDDSPVPGLVH 88 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL------SSKDTEAALAYIQEKSQIW 145 RYP R L +CPVYCRFC R VG+ TV S K E +I++ + Sbjct: 89 RYPGRALFLATSICPVYCRFCTRSYAVGANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQ 148 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI----NP------E 195 +++ +GGD L +++++ L I H++ +R S+ V P RI +P E Sbjct: 149 DIVVSGGDAYFLQPDHVKEIVYRLLNIPHIRRIRLASKGLAVAPGRILDDADPWTDALIE 208 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + +E GK V + H NH E + A ++L G+I+ +QSVLLKG+N+ + L Sbjct: 209 VSNKGREMGKQVCLHTHINHANEITWITRLAANKLFKHGVIVRNQSVLLKGVNNHKDTLL 268 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 +L++T ++ I+PYY++ D+ G R ++E + L+ K+SG P +++DLPG Sbjct: 269 DLIKTLADMNIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKELRGKLSGFMMPSFVIDLPG 328 Query: 316 GYGKVKIDTHNIKKVGNGSY 335 G GK + T + G +Y Sbjct: 329 GGGKRLVSTMESYQNGEATY 348 >gi|300724424|ref|YP_003713744.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061] gi|297630961|emb|CBJ91641.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061] Length = 342 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 98/274 (35%), Positives = 149/274 (54%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P DP+ Q + +EE + P+ DP+ D S + G++H+Y +R LL + C V CR Sbjct: 67 DPRDPLLLQVLTAREEFAVTPDFSTDPL-DEQRSVVPGLLHKYRNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + + AL YI + +I E+IF+GGDPL+ L ++ + Sbjct: 126 YCFRRHFPYEDNKG---NKNNWQLALDYIGQHPEIDEIIFSGGDPLMAKDHELDWLISRI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I HV+ LR H+R+P+V P+RI L L ++ V + H NH E E +++R Sbjct: 183 ESIPHVKRLRIHTRLPVVIPERITLALCNRLAQSHLQVIMVTHINHANEIDNEFRGSMTR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSV L+ IND+ E LA+L + I PYY+H D G +HF + EE Sbjct: 243 LKQAGVTLLNQSVFLRDINDNAETLADLSNVLFDTGILPYYIHVLDKVQGAAHFLVNDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + I+ L K+SG P ++ G K +D Sbjct: 303 AKIIMRELLSKVSGYLVPRLTREIGGEPSKTPLD 336 >gi|255318144|ref|ZP_05359387.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter radioresistens SK82] gi|262378563|ref|ZP_06071720.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164] gi|255304796|gb|EET83970.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter radioresistens SK82] gi|262299848|gb|EEY87760.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164] Length = 338 Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 96/272 (35%), Positives = 146/272 (53%), Gaps = 2/272 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P DP+ Q +P EL P DP+G+ + L G++H+Y R LL L C V+CR Sbjct: 63 DPLDPLLLQVLPHHLELEDFPGFVTDPLGEEAANLLPGVLHKYKTRFLLTLTGACAVHCR 122 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + ++D A YI + ++ E+I +GGDPL LS+++L L+ L Sbjct: 123 YCFRRHF--PYQENLPKNEDWPAIKNYILSQPEVHEIILSGGDPLTLSNRKLGLWLERLE 180 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I + LR HSRVPIV P RI+ ELI L+ + + + +H+NH E + + + L Sbjct: 181 SIPQIDTLRIHSRVPIVIPDRIDHELISLLENSRLRIILVVHSNHASELDDFTCSKLHEL 240 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 A + +L+Q+VLLKGIND E+L NL E R+ PYYLH D G HF L + Sbjct: 241 ARRQVTVLNQAVLLKGINDSAEVLINLSYRLFEARVMPYYLHVLDKVKGAHHFDLPSSKI 300 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 ++ + + G P + ++ G K + Sbjct: 301 DEVYKEVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|71898719|ref|ZP_00680888.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1] gi|71731484|gb|EAO33546.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1] Length = 342 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 98/267 (36%), Positives = 145/267 (54%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E + + D +GD GI+ +Y RILL C V+CR+C Sbjct: 75 HDPLLRQVLPIDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYC 134 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR ++ T + E A A+++ I EVI +GGDPL LS +L ++ LR Sbjct: 135 FRRHFPYAED-TASHDRWRETA-AFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGT 192 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+P+V P+RI+ L++ L PV IHANH EF AA++ L Sbjct: 193 PHLKRLRIHSRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRG 252 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 G LL+Q+VLL+G+ND+ LA L + PYYLH D AGT+H+ + + Sbjct: 253 VGTQLLNQAVLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARART 312 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + A L ++SG P ++ ++PG K Sbjct: 313 LHAELVARLSGYLVPRFVREVPGDSSK 339 >gi|52840543|ref|YP_094342.1| L-lysine 2,3-aminomutase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627654|gb|AAU26395.1| L-lysine 2,3-aminomutase, radical SAM domain protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 326 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 102/278 (36%), Positives = 150/278 (53%), Gaps = 3/278 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A + NP DP+ Q + +++EL+ + DP+ ++N + +KG++H+Y R+LL L Sbjct: 49 FAKRMQKGNPKDPLLLQVLAKEDELSEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLT 107 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 VC V CR+CFRR + + + AYI S I EVI +GGDPL+ ++ L Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDSSITEVILSGGDPLLAANLVL 165 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 +++L++L I H+ LR H+R+PIV P+RI+ L+ L I +H NHP E E Sbjct: 166 EELLQSLEEISHIHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDES 225 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 + A S L A LL+QSVLL GINDD IL+ L + I PYYLH D G++H Sbjct: 226 VLRACSDLKKAACYLLNQSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAH 285 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 F + + Q I L+ + G P + PG K Sbjct: 286 FDMPLLRAQSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323 >gi|289620587|emb|CBI52948.1| unnamed protein product [Sordaria macrospora] Length = 517 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 108/339 (31%), Positives = 179/339 (52%), Gaps = 29/339 (8%) Query: 36 SIALTPVIANLINPHNPN-DPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91 +I +TP I + +N +P DPI RQF+P K + LP+ + D + + SP+KG+VH Sbjct: 176 AIRMTPYILSRVNWQDPRHDPIVRQFLPMKSIM--LPDHPKLTLDSLHETADSPVKGLVH 233 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIW 145 RY D+ L VCP YC FC R VG+ TV + + E A AYI+ + ++ Sbjct: 234 RYTDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIESRPELQ 293 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-- 200 +++ +GGD L ++L + + L + +++ RF S+ V P RI E + L Sbjct: 294 DIVVSGGDAYYLQPEQLTLIGERLISMPNIKRFRFASKGLAVAPTRILDESDGWVNALID 353 Query: 201 -----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 K+AGK + + H N+P E S + A +L G+++ +Q+VLL+G+NDD E ++ Sbjct: 354 ISNKAKKAGKSMALHTHFNNPNEISWVSSDATQKLFENGVMVRNQTVLLRGVNDDYETMS 413 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 L+R + I PYY++ D+ H R ++ + A ++ I+G P +++DLPG Sbjct: 414 TLIRQLADNNITPYYVYQCDMVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPG 473 Query: 316 GYGKVKIDTHN--IKKVGNGSY---CIT--DHHNIVHDY 347 G GK +H +K G ++ +T D N V++Y Sbjct: 474 GGGKRLACSHQNYDRKTGVSTFMAPAVTSRDKANKVYEY 512 >gi|170021843|ref|YP_001726797.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC 8739] gi|169756771|gb|ACA79470.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC 8739] Length = 342 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 150/274 (54%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPEDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|262166674|ref|ZP_06034411.1| lysine 2,3-aminomutase [Vibrio mimicus VM223] gi|262026390|gb|EEY45058.1| lysine 2,3-aminomutase [Vibrio mimicus VM223] Length = 340 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E + P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPYDPLLRQVLPLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 ATIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+N+ E L T + I PYYLH D G +HF ++ E Sbjct: 243 LRAVNVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDAE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++++A L E++SG P ++ G K +D H Sbjct: 303 ARQLMAGLIERVSGYLVPKLTREIGGKPSKTPLDLH 338 >gi|54296337|ref|YP_122706.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris] gi|53750122|emb|CAH11514.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris] Length = 326 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 102/278 (36%), Positives = 149/278 (53%), Gaps = 3/278 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A + NP DP+ Q + +++EL + DP+ ++N + +KG++H+Y R+LL L Sbjct: 49 FAKRMQKGNPKDPLLLQVLAKEDELTEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLT 107 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 VC V CR+CFRR + + + AYI I EVI +GGDPL+ ++ L Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVL 165 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 +++L++L I H+ LR H+R+PIV P+RI+ L+ L I +H NHP E E Sbjct: 166 EELLQSLEEISHIHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDES 225 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 + A S L A LL+QSVLL GINDD IL+ L T + I PYYLH D G++H Sbjct: 226 VLRACSDLKKAACYLLNQSVLLAGINDDAGILSKLSHTLFDYGIMPYYLHLLDKVKGSAH 285 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 F + + Q I L+ + G P + PG K Sbjct: 286 FDMPLPRAQSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323 >gi|239618040|ref|YP_002941362.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF 19.5.1] gi|239506871|gb|ACR80358.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF 19.5.1] Length = 366 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 159/292 (54%), Gaps = 9/292 (3%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + K + +++K+++ + NLI +PNDPI R IP +EL + D Sbjct: 16 LDKTEKEKLKKVTEKFVFRTNEYYLNLIKWDDPNDPIKRIIIPSMDEL--IEWGELDASN 73 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 ++ ++ G+ H+Y D L+ + VC CRFCFR+ + + ++ D E L YI+ Sbjct: 74 EHKYTVAPGLEHKYKDTALMLVSRVCGGICRFCFRKRVFLAGNREIMI--DVEPGLEYIK 131 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197 + +I V+ +GGDPL+LS +L+ ++ LR I HVQI+R +++ +P RI +P+LI Sbjct: 132 KHKEITNVLLSGGDPLMLSTSKLENIISRLRKIDHVQIIRIGTKMVAFNPYRIIDDPKLI 191 Query: 198 QCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 + LK+ P +YI NHP E ++ AI AI+ L AG L +Q+ L++GIND PE L Sbjct: 192 ELLKKYSTPKKRIYIMTQFNHPREITDVAIEAINLLKEAGTELANQTPLIRGINDSPETL 251 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 A L R + + PYY+ G + + IEEG +I +SGL + Sbjct: 252 AELFRKLSFIGVPPYYVFQCRPTKGNKAYSVPIEEGYEIFRKATAMVSGLAK 303 >gi|224370018|ref|YP_002604182.1| YodO [Desulfobacterium autotrophicum HRM2] gi|223692735|gb|ACN16018.1| YodO [Desulfobacterium autotrophicum HRM2] Length = 359 Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust. Identities = 99/302 (32%), Positives = 162/302 (53%), Gaps = 24/302 (7%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 E++ I + + TP A L++P +P P+ RQ IP +EL E+ G N Sbjct: 27 EELKAINTLDTRW--GTTPYFAALMDPDDPCCPVRRQIIPSLKEL-------ENTYGIKN 77 Query: 83 HSPL-----------KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 + I +Y DR+ + C YCR CFRRE+V Q+ + D Sbjct: 78 YLMFHENRTVDPERPDCIARQYQDRVAFTVTDTCASYCRHCFRREVVVDQRLKL--RFDL 135 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 + + +I++ +I +V+ TGGDP +LS + L ++ LR I HV+++RF +R I PQR Sbjct: 136 DQGIKWIKKNKEIKDVLVTGGDPFLLSDQLLGDLITQLRQIDHVRMIRFGTRTIINLPQR 195 Query: 192 INPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 I +L++ L + + P++I NHP E +++ A+ L G+ + +Q+VLLKGINDD Sbjct: 196 ITQDLMEILGDFHRVPIWINTQCNHPKEITDKTARAVFDLLRCGVNVGNQAVLLKGINDD 255 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKISGLCQPFY 309 + L + V RI+PYYL + + A G HFR +E+G +++ L+ +GL +P Y Sbjct: 256 VDTFRELHQKLVYTRIRPYYLFYCEAAPGIDHFRTGVEKGSQLIRDGLQGHTTGLARPTY 315 Query: 310 IL 311 ++ Sbjct: 316 VI 317 >gi|37527976|ref|NP_931321.1| hypothetical protein plu4131 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787412|emb|CAE16503.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 342 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 98/274 (35%), Positives = 148/274 (54%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +PNDP+ Q I EE + P DP+ D S + G++H+Y +R LL + C + CR Sbjct: 67 DPNDPLLLQVITTPEEFTLTPGFSTDPL-DEQRSAVPGLLHKYRNRALLLVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + ++ + AL YIQ+ ++ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYEDNKG---NKRNWQQALDYIQQHPELDEIIFSGGDPLMAKDHELDWLISNL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR H+R+P+V P RI L L ++ V + H NH E + ++ Sbjct: 183 EKISHIKRLRIHTRLPVVIPARITTTLCDRLAQSRLQVIMVTHINHANEIDQSLRNSMIL 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AGI LL+QSVLL+GIN+ + LA+L + I PYY+H D G +HF + EE Sbjct: 243 LKQAGITLLNQSVLLRGINNHSDTLADLSNALFDAGILPYYIHVLDKVQGAAHFMVNDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + ++ L KISG P ++ G K +D Sbjct: 303 AKGLIRELLTKISGYLVPRLAREIGGEPSKTPLD 336 >gi|148358501|ref|YP_001249708.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby] gi|296105850|ref|YP_003617550.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy] gi|148280274|gb|ABQ54362.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby] gi|295647751|gb|ADG23598.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy] Length = 326 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 101/278 (36%), Positives = 149/278 (53%), Gaps = 3/278 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A + NP DP+ Q + +++EL + + DP+ ++N + +KG++H+Y R+LL L Sbjct: 49 FAERMQKGNPKDPLLLQVLAKEDELTVADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLT 107 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 VC V CR+CFRR + + + AYI I EVI +GGDPL+ ++ L Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVL 165 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 +++L++L I HV LR H+R+PIV P+RI+ L+ L I +H NHP E E Sbjct: 166 EELLQSLEEISHVHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDES 225 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 + A S L A LL+QSVLL G+NDD IL+ L + I PYYLH D G++H Sbjct: 226 VLRACSDLKKATCYLLNQSVLLAGVNDDAVILSKLSHALFDYGIMPYYLHLLDKVKGSAH 285 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 F + + Q I L+ + G P + PG K Sbjct: 286 FDMPLPRAQSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323 >gi|110808069|ref|YP_691589.1| hypothetical protein SFV_4304 [Shigella flexneri 5 str. 8401] gi|110617617|gb|ABF06284.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 342 Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 93/274 (33%), Positives = 150/274 (54%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PI P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIAIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+G+ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|261211227|ref|ZP_05925516.1| lysine 2,3-aminomutase [Vibrio sp. RC341] gi|260839728|gb|EEX66339.1| lysine 2,3-aminomutase [Vibrio sp. RC341] Length = 340 Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E + P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPYDPLLRQVLPLNAEFEVHPGYSNDPLDEQNNA-IPGLLHKYKNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + + + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+ND L T + I PYYLH D G +HF ++ ++ Sbjct: 243 LRAVNVTLLNQGVLLKGVNDTVAAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDK 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 ARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|260770856|ref|ZP_05879785.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972] gi|260614093|gb|EEX39283.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972] Length = 340 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 93/276 (33%), Positives = 149/276 (53%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P EE ++ P EDP+ + N++ + G++H+Y +R L+ + C + CR Sbjct: 67 NPYDPLLRQVLPLSEEFDVHPGYSEDPLDEQNNA-VPGLLHKYRNRALMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + ++ E+I +GGDPL+ + L +++ + Sbjct: 126 YCFRRHFPYADNKG---SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I HV+ LR HSR+P+V P R+ EL+ L V + H NH E + ++R Sbjct: 183 GAISHVKRLRIHSRLPVVIPARVTDELVALLANTRLQVVLVTHINHANEINLALKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q V+LKG+ND L T + I PYY+H D G +HF ++ E Sbjct: 243 LRAVNVTLLNQGVMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + I++ L E++SG P ++ G K +D H Sbjct: 303 AKAIMSGLLERVSGYLVPTLTREIGGRKSKTPLDLH 338 >gi|325921161|ref|ZP_08183030.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865] gi|325548355|gb|EGD19340.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865] Length = 342 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 92/267 (34%), Positives = 142/267 (53%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E+ ++P D +GD G++ +Y R LL C V+CR+C Sbjct: 75 HDPLLRQVLPLDAEMRLVPGFGLDAVGDGAAKIADGVIQKYRGRALLIATGSCAVHCRYC 134 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR +++ + A+A I I EV+ +GGDPL L+ +L ++ L I Sbjct: 135 FRRHFPYAEETA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATSKLAELTDALAAI 192 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+P+V P+R++ L+ L+ PV IHANH EF AA+ + + Sbjct: 193 GHIKRLRIHSRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFDSTVDAAMRAMRD 252 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 G LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF + + Sbjct: 253 TGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDAHARA 312 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + L ++SG P + ++PG GK Sbjct: 313 LHTELATRLSGYLVPRLVREIPGDTGK 339 >gi|221133998|ref|ZP_03560303.1| lysine 2;3-aminomutase [Glaciecola sp. HTCC2999] Length = 351 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 93/293 (31%), Positives = 156/293 (53%), Gaps = 6/293 (2%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP----IGDNNHSPLKGIV 90 +++ + +L+ ++ +DP+ +Q +P +E + PE DP + + ++ KG++ Sbjct: 55 FALRVPRFFVDLMARNDLDDPLLKQVMPVADEFIVDPEFSLDPLKEQVNETTNTSTKGML 114 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y +R+LL L C V CR+CFRR Q + +D +I+ +I EVI + Sbjct: 115 HKYQNRVLLMLRGGCAVNCRYCFRRHFPYDQHHN--NKQDWLDVFEHIKTDPKIDEVILS 172 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + + + L I ++ +R H+R+P+V P R+ PEL+ L ++ K + Sbjct: 173 GGDPLMANDDYMAWICAQLETIPSIKRIRLHTRLPVVLPYRVTPELLIALAQSSKQTIMV 232 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H NHP E S E I ++ L AG+ +L+Q+VLLKGIND L RI+PYY Sbjct: 233 LHINHPKEISSELIQKVALLHEAGVTVLNQAVLLKGINDSAHTQIALNEALFSARIQPYY 292 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 LH D G +HF ++ + I+ + K SG P + ++ G K +D Sbjct: 293 LHMFDKVQGAAHFAISDKRAVNIMREVLTKQSGYMVPKLVREIGGESSKTPVD 345 >gi|251788023|ref|YP_003002744.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591] gi|247536644|gb|ACT05265.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591] Length = 345 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 100/301 (33%), Positives = 157/301 (52%), Gaps = 5/301 (1%) Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83 Q+ +E + + + A + P + DP+ Q + ++E P DP+ D H Sbjct: 40 QLTAGREARRLFPLRVPRAFAARMRPGDARDPLLLQVLTAQDEFIATPGFSHDPL-DEQH 98 Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKS 142 S + G++H+Y +R LL + C V CR+CFRR +G + + AL YI++ Sbjct: 99 SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQHP 155 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 Q+ E+IF+GGDPL+ L +L L I H++ LR H+R+P+V P RI EL + L + Sbjct: 156 QLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLRIHTRLPVVIPARITAELCRRLAQ 215 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 + V + H NH E E ++RL AG+ LL+QSVLL+G+ND+ LA L Sbjct: 216 SPLRVVLVTHINHANEIDTELADGMARLRQAGVTLLNQSVLLRGVNDNANTLAALSNALF 275 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + I PYYLH D G +HF + ++ + +V L ++SG P ++ G K + Sbjct: 276 DAGILPYYLHVLDKVQGAAHFLVPDDDARTLVRELMMQVSGYLVPSLAREIGGEASKTLL 335 Query: 323 D 323 D Sbjct: 336 D 336 >gi|54293293|ref|YP_125708.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens] gi|53753125|emb|CAH14572.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens] Length = 326 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 102/278 (36%), Positives = 148/278 (53%), Gaps = 3/278 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A + NP DP+ Q + +++EL + DP+ +NN + +KG++H+Y R+LL L Sbjct: 49 FAKRMQKGNPKDPLLLQVLAKEDELTEADDYVIDPLSENN-TLIKGLLHKYRGRVLLTLT 107 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 VC V CR+CFRR + + + AYI I EVI +GGDPL+ ++ L Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVL 165 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 +++L++L I H+ LR H+R+PIV P+RI+ L+ L I IH NHP E E Sbjct: 166 EELLQSLEEISHIHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDES 225 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 + A S L A LL+QSVLL GINDD IL+ L + I PYYLH D G++H Sbjct: 226 VLRACSDLKKAACYLLNQSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAH 285 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 F + + + I L+ + G P + PG K Sbjct: 286 FDMPLPRARSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323 >gi|262401937|ref|ZP_06078502.1| lysine 2,3-aminomutase [Vibrio sp. RC586] gi|262351909|gb|EEZ01040.1| lysine 2,3-aminomutase [Vibrio sp. RC586] Length = 340 Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E + P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPYDPLLRQVLPLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPLI L +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKAIWQQSLDYIAQNPQLNEVIFSGGDPLIAKDHELAWLIERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + + + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+N+ E L T + I PYYLH D G +HF ++ +E Sbjct: 243 LRAVNVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++++ L E++SG P ++ G K +D H Sbjct: 303 ARQLMGGLIERVSGYLVPKLTREIGGKPSKTPLDLH 338 >gi|291615956|ref|YP_003518698.1| YjeK [Pantoea ananatis LMG 20103] gi|291150986|gb|ADD75570.1| YjeK [Pantoea ananatis LMG 20103] Length = 342 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 99/274 (36%), Positives = 148/274 (54%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + DP+ Q + ++E P DP+ + N S + G++H+Y +R LL + C V CR Sbjct: 67 DAQDPLLLQVLTSRQEFVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ +AAL YI ++ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYQDNQG---NKRNWQAALDYITAHPELDEIIFSGGDPLMAKDHELAWLIDAL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI L Q L E V + H NH E E A+ R Sbjct: 183 GAIPHLKRLRIHSRLPVVIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L A + LL+QSVLL+G+NDD + LA L + I PYYLH D G +HF ++ EE Sbjct: 243 LKRADVTLLNQSVLLRGVNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + ++ SL ++SG P ++ G K +D Sbjct: 303 ARALMRSLLPRVSGYLVPKLAREIGGEPSKTPLD 336 >gi|260772045|ref|ZP_05880962.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14] gi|260612912|gb|EEX38114.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14] Length = 340 Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 100/276 (36%), Positives = 148/276 (53%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ +P +E I P DP+ + N+S G++H+Y +R LL + C + CR Sbjct: 67 NPHDPLLRQVLPLSDEFIIHPGYSTDPLEEQNNS-TPGLLHKYRNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG L + + L YI + Q+ EVI +GGDPL+ L +++ + Sbjct: 126 YCFRRHFPYQDNKGNKLVWQQS---LDYIAQHRQLNEVILSGGDPLMAKDHELGWLIEQI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL+ E V + H NH E + E ++R Sbjct: 183 AAIPHIKRLRIHSRLPVVIPARITDELVSLCAETRLQVILVTHINHANEINAELSQQLAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+QSVLLKG+ND L + I PYYLH D G +HF ++ E+ Sbjct: 243 LRAEKVTLLNQSVLLKGVNDSVPAQVALSEALFDAGILPYYLHVLDKVQGAAHFYVSDEQ 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + I+A L E++SG P ++ G K +D H Sbjct: 303 ARTIIAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|327396208|dbj|BAK13630.1| lysine 2 3-aminomutase YjeK [Pantoea ananatis AJ13355] Length = 342 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 99/274 (36%), Positives = 148/274 (54%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + DP+ Q + ++E P DP+ + N S + G++H+Y +R LL + C V CR Sbjct: 67 DAQDPLLLQVLTSRQEFVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ +AAL YI ++ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYQDNQG---NKRNWQAALDYIAAHPELDEIIFSGGDPLMAKDHELAWLIDAL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI L Q L E V + H NH E E A+ R Sbjct: 183 GAIPHLKRLRIHSRLPVVIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L A + LL+QSVLL+G+NDD + LA L + I PYYLH D G +HF ++ EE Sbjct: 243 LKRADVTLLNQSVLLRGVNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + ++ SL ++SG P ++ G K +D Sbjct: 303 ARALMRSLLPRVSGYLVPKLAREIGGEPSKTPLD 336 >gi|294664930|ref|ZP_06730245.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605300|gb|EFF48636.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 342 Score = 172 bits (436), Expect = 6e-41, Method: Compositional matrix adjust. Identities = 99/269 (36%), Positives = 144/269 (53%), Gaps = 6/269 (2%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E+ P D +GD G++ +Y R LL C V+CR+C Sbjct: 75 HDPLLRQVLPLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYC 134 Query: 113 FRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 FRR + T +D A+A I I EV+ +GGDPL L+ +L ++ L Sbjct: 135 FRRHFPYAEETATRDGWRD---AVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAA 191 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231 + H++ LR HSR+PIV P+R++ L+ L+ PV +HANH EF AA L Sbjct: 192 VPHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLR 251 Query: 232 NAGIILLSQSVLLKGINDDPEILANLM-RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG LL+Q+VLL+G+ND + LA L R+FV + PYYLH D AG +HF + Sbjct: 252 EAGAQLLNQAVLLRGVNDSVDALAALSERSFVA-GVLPYYLHQLDRVAGVAHFEVDDARA 310 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319 + + A L ++SG P + ++PG GK Sbjct: 311 RALHAELAARLSGYLVPRLVREIPGDTGK 339 >gi|307609109|emb|CBW98551.1| hypothetical protein LPW_03791 [Legionella pneumophila 130b] Length = 326 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 102/278 (36%), Positives = 148/278 (53%), Gaps = 3/278 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A + NP DP+ Q + +++EL + DP+ ++N + +KG++H+Y R+LL L Sbjct: 49 FAKRMQKGNPKDPLLLQVLAKEDELTEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLT 107 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 VC V CR+CFRR + + + AYI I EVI +GGDPL+ ++ L Sbjct: 108 GVCAVNCRYCFRRHF--PYQANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVL 165 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 +++L++L I H+ LR H+R+PIV P+RI+ L+ L I IH NHP E E Sbjct: 166 EELLQSLEEISHIHTLRIHTRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDES 225 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 + A S L A LL+QSVLL GINDD IL+ L + I PYYLH D G++H Sbjct: 226 VLQACSDLKKAACYLLNQSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAH 285 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 F + + Q I L+ + G P + PG K Sbjct: 286 FDMPLPRAQSIYHQLQSLVPGYLLPRLAREEPGRSSKT 323 >gi|315178899|gb|ADT85813.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218] Length = 340 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 92/276 (33%), Positives = 149/276 (53%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P EE ++ P EDP+ + N++ + G++H+Y +R L+ + C + CR Sbjct: 67 NPYDPLLRQVLPLSEEFDVHPGYSEDPLDEQNNA-VPGLLHKYRNRALMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + ++ E+I +GGDPL+ + L +++ + Sbjct: 126 YCFRRHFPYADNKG---SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P R+ EL+ L V + H NH E + ++R Sbjct: 183 GAISHIKRLRIHSRLPVVIPARVTDELVALLANTHLQVVLVTHINHANEINLALKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q V+LKG+ND L T + I PYY+H D G +HF ++ E Sbjct: 243 LRAVNVTLLNQGVMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + I++ L E++SG P ++ G K +D H Sbjct: 303 AKAIMSGLLERVSGYLVPTLTREIGGRKSKTPLDLH 338 >gi|238898952|ref|YP_002924634.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466712|gb|ACQ68486.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 345 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 101/302 (33%), Positives = 159/302 (52%), Gaps = 10/302 (3%) Query: 28 IKEISNHYSIALTPV-----IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 IK Y+ AL P+ A + P +P DP+ Q + +E DP+ + Sbjct: 39 IKLRQGAYARALFPLRVPIAFAEKMTPGDPKDPLLLQVLTLSDEFVHTSGFSADPLCEQA 98 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEK 141 + L G++H+Y +R+L+ + C V+CR+CFRR + KG S + E YI++ Sbjct: 99 -AVLPGLLHKYRNRVLMLIKGGCAVHCRYCFRRHFPYQNNKG---SQVNREQVFNYIRKH 154 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+PIV P RI L + Sbjct: 155 TELDEVIFSGGDPLMAKDPELASLITVLESIPHIKRLRIHTRLPIVIPSRITTRLCESFS 214 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 + + + H NHP E + ++ RL AG+ LL+Q+VLLK +N++ EILA L Sbjct: 215 NSSLQILMVTHINHPNEMDQAVYNSMYRLKQAGVTLLNQTVLLKDVNNNAEILAQLSNRL 274 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 I PYYLH D G +HF + E ++I+ +L ++SG P ++ G K+ Sbjct: 275 FNAGILPYYLHLLDKVQGAAHFMVEEHEARQIMKALLGQVSGYLVPRLTREVAGQPSKIP 334 Query: 322 ID 323 ID Sbjct: 335 ID 336 >gi|149192243|ref|ZP_01870457.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1] gi|148833916|gb|EDL50939.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1] Length = 340 Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust. Identities = 96/276 (34%), Positives = 148/276 (53%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P +E + EDP+ + + + + G++H+Y +R LL + C V CR Sbjct: 67 NPYDPLLRQVLPLSQEFEVHNGYSEDPLEEQD-AAVPGLLHKYHNRALLIVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + AL YI +I E+I +GGDPL+ L +++ Sbjct: 126 YCFRRHFPYEDNKG---GKANWQVALDYIAAHPEIDEIILSGGDPLMAKDSELAWLVQKA 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P+RI EL Q LK+ + H NH E + E A+++R Sbjct: 183 ESIHHLKTLRIHSRLPVVIPKRITEELCQLLKQTRLNTILVTHINHANEVNSEFSASMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 + N G LL+Q VLLKG+ND + L + I PYYLH D G +HF ++ ++ Sbjct: 243 IKNTGTTLLNQGVLLKGVNDSVDAQFELSHALFSVGILPYYLHVLDKVQGAAHFFISDDD 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + I+ L +++SG P + G K +D H Sbjct: 303 AKAIIQGLIKRVSGYLVPKLTREEGGRASKTPLDLH 338 >gi|304396296|ref|ZP_07378177.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB] gi|304355805|gb|EFM20171.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB] Length = 327 Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 97/273 (35%), Positives = 151/273 (55%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + +DP+ Q + +++E P DP+ D + + G++H+Y +R LL + C V CR Sbjct: 52 DAHDPLLLQVLTRRQEFIDAPGYSTDPL-DEQSNVVPGLLHKYRNRALLLVKGGCAVNCR 110 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + +AAL YI E ++ E+IF+GGDPL+ L ++ L Sbjct: 111 YCFRRHF--PYQDNPGNKRSWQAALDYIAEHPELDEIIFSGGDPLMAKDHELAWLIAALE 168 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+P+V P RI +L Q L + V + H NH E E ++ RL Sbjct: 169 QIPHLKRLRIHSRLPVVIPARITEQLCQMLSDTRLQVIMVTHINHAQEIDEALRESMIRL 228 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+QSVLL+GIND+ + LA L + I PYYLH D G +HF ++ +E Sbjct: 229 KRAGVTLLNQSVLLRGINDNAQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDDEA 288 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +++V SL ++SG P ++ G K +D Sbjct: 289 RQLVRSLLSQVSGYLVPKLAREIGGEPSKTPLD 321 >gi|90581266|ref|ZP_01237063.1| hypothetical protein VAS14_18921 [Vibrio angustum S14] gi|90437505|gb|EAS62699.1| hypothetical protein VAS14_18921 [Vibrio angustum S14] Length = 340 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 148/274 (54%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ +P ++E + DP+ + + + G++H+Y +R+LL + C V CR Sbjct: 67 NPHDPLLRQILPLEQEFEVHQGYSVDPL-EEQQNDIPGLLHKYHNRVLLIVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + +LAYI +I EVI +GGDPL+ LQ +++ + Sbjct: 126 YCFRRHFPYSDNKG---NKHQWQQSLAYIAAHPEINEVILSGGDPLMAKDHELQWLVEHI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI L Q L E + H NH E + A+ + Sbjct: 183 AAIPHIKRLRIHSRLPVVIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMQK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L A + LL+Q VLLKGIND + L +L + I+PYYLH D G +H+ + E Sbjct: 243 LKQANVTLLNQGVLLKGINDSVKTLTDLSEALFDAGIQPYYLHVLDRVQGAAHYMVDDET 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++++A L ++SG P ++ G K +D Sbjct: 303 ARQLMAGLITQVSGYLVPKLTREIGGRASKTPLD 336 >gi|307298212|ref|ZP_07578016.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916298|gb|EFN46681.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2] Length = 364 Score = 172 bits (435), Expect = 8e-41, Method: Compositional matrix adjust. Identities = 99/304 (32%), Positives = 168/304 (55%), Gaps = 12/304 (3%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 LTS + + N EQI E+K++++ Y LIN ++P+DPI R +P EEL Sbjct: 7 LTSVEKIEELN---DEQITEMKKVTDVYPFRANDYYLGLINWNDPHDPIKRIILPDFEEL 63 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + + D ++ ++ G+ H+Y D LL + VC +CRFCFR+ + ++ V++ Sbjct: 64 DEWGDL--DASQEHIYTVAPGMEHKYKDTALLLVSKVCGSFCRFCFRKRLFSTENKEVVN 121 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 D + YI++ +I V+ TGGD LILS ++L +++ LR I HV I+RF S++ Sbjct: 122 --DVTLGVEYIRKHKEITNVLLTGGDSLILSTEKLGDIVRQLREIDHVGIIRFGSKMVAF 179 Query: 188 DPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 +P RI +P+L +K+ P +YI H NHP E ++EAI ++ L +AG ++ +Q+ Sbjct: 180 NPYRIINDPDLPDMVKKYSTPKKRIYIMAHFNHPRELTDEAIRGLNILRDAGAVICNQTP 239 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 +++G+ND E++ L R + I PYY+ G + + E G +I + +S Sbjct: 240 MIRGVNDSVEVMTELFRKLSFIGIPPYYVFQCRPTKGNHTYAVPAENGYEIFKKSIDSVS 299 Query: 303 GLCQ 306 GL + Sbjct: 300 GLAK 303 >gi|50085317|ref|YP_046827.1| putative aminomutase [Acinetobacter sp. ADP1] gi|49531293|emb|CAG69005.1| conserved hypothetical protein; putative aminomutase [Acinetobacter sp. ADP1] Length = 338 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 95/273 (34%), Positives = 149/273 (54%), Gaps = 5/273 (1%) Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91 S+ + + + N + +P DP+ Q +P EL PE DP+G+ + L G++H Sbjct: 44 SDTFKLRVPRAFVNKMQKADPFDPLLLQVLPHHLELEDHPEFVTDPLGEEEANQLPGVLH 103 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 +Y R LL L C V+CR+CFRR + + + D YIQ+ I EVI +G Sbjct: 104 KYQSRFLLTLTGACAVHCRYCFRRHF--PYQENLPKNNDWPQIQNYIQQHPLINEVILSG 161 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 GDPL L++ +L+ ++ L + V+ILR HSRVPIV P RI+ EL+ L+ + + + + Sbjct: 162 GDPLTLTNHKLKIWIERLESLPQVKILRIHSRVPIVIPNRIDEELLSLLENSRLRIIMVV 221 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271 H+NH E + + +L+ + + +Q+VLLKG+ND + L L + + R+ PYYL Sbjct: 222 HSNHAAELDDFTCNQLHKLSLRNVTVFNQAVLLKGVNDSAQTLIELSQRLFDARVMPYYL 281 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 H D G HF L E K+ + KE ++GL Sbjct: 282 HVLDKVKGAQHFDL---ESSKVDSLYKEVLAGL 311 >gi|294650801|ref|ZP_06728149.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194] gi|292823316|gb|EFF82171.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194] Length = 338 Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust. Identities = 93/272 (34%), Positives = 147/272 (54%), Gaps = 2/272 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P DP+ Q +P EL PE DP+G+ + + G++H+Y R LL L C ++CR Sbjct: 63 DPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQMAGVLHKYQSRFLLTLTGACAIHCR 122 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + D E YI++ I EVI +GGDPL L+++++ L+ L Sbjct: 123 YCFRRHF--PYQENLPKNDDWENIKHYIEQNPLINEVILSGGDPLTLNNRKISLWLERLA 180 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 + ++ILR HSRVPIV P R++ ELI LK + + + +H+NH E + + + +L Sbjct: 181 SLPQIKILRIHSRVPIVIPNRVDEELISILKNSRLRIIVVVHSNHAAELDDFTCSKLLQL 240 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + I +L+Q+VLLKG+ND + L L + R+ PYYLH D G HF L E Sbjct: 241 SLHHITVLNQAVLLKGVNDSAKTLTELSNRLFDARVMPYYLHVLDKVKGAQHFDLRSSEI 300 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 I + + + G P + ++ G K + Sbjct: 301 DHIYSDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|261254094|ref|ZP_05946667.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891] gi|260937485|gb|EEX93474.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891] Length = 340 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 93/275 (33%), Positives = 150/275 (54%), Gaps = 3/275 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P EE I DP+ + N+S + G++H+Y +R L+ + C + CR Sbjct: 67 NPFDPLLRQVLPLSEEFEIHEGYSNDPLEEQNNS-IPGLLHKYHNRALMIVKGGCAINCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + S + +L YIQ+ +I EVI +GGDPL+ + L ++ + Sbjct: 126 YCFRRHFPYDENKS--SKSVWQQSLDYIQQHPEIDEVILSGGDPLMAKDEELNWLVNHIA 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+P+V P RI P L L+ + H NH E +E +++ L Sbjct: 184 DIPHIKRLRIHSRLPVVIPARITPALANLLENTRLQTILVTHINHAQEIHQELRDSLTTL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+Q V+LKG+ND + L + + + PYY+H D G +HF ++ ++ Sbjct: 244 KRAGVTLLNQGVMLKGVNDSIDDQVTLSQALFDAGVLPYYMHVLDKVQGAAHFFISDQQA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + I+A + EK+SG P ++ G K +D H Sbjct: 304 KIIMAGVMEKVSGYLVPKLTREIGGRASKTPLDLH 338 >gi|46445864|ref|YP_007229.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia amoebophila UWE25] gi|46399505|emb|CAF22954.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia amoebophila UWE25] Length = 347 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 101/289 (34%), Positives = 153/289 (52%), Gaps = 7/289 (2%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 ++I + +A + + DP+ +QF+P K E +DP+GD ++H+Y Sbjct: 61 FAINVPYRLAQKMTKGSLEDPLVKQFLPFKSEFENHNLFVQDPVGDEQCRRTAQLLHKYR 120 Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R+LL C ++CR+CFR+ S T L D I++ S I EVI +GGD Sbjct: 121 GRVLLVCTSACAMHCRYCFRQNFSYQSHDKTFLKELDL------IRQDSSIHEVILSGGD 174 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL LS+ L K+ + L I H++ +RFH+R PI P+RI+ + ++ K ++ IH Sbjct: 175 PLSLSNDILAKLFEELNGISHLKRIRFHTRFPIGIPERIDKGFLNIIENCPKQIFFVIHC 234 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E E+ + L G +LL+QSVLLKG+ND E+L L + I PYYLH Sbjct: 235 NHPLELDEDIFERLKALHLRGCVLLNQSVLLKGVNDRIEVLEELCELLSDHGIIPYYLHQ 294 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 D G SHF L +EG ++ L +++SG P Y+ ++ G K I Sbjct: 295 LDRVKGASHFELGEKEGAALIQELSKRLSGYAIPRYVREIAGEAHKTPI 343 >gi|188496002|ref|ZP_03003272.1| KamA family protein [Escherichia coli 53638] gi|254037160|ref|ZP_04871237.1| KamA family protein [Escherichia sp. 1_1_43] gi|300949103|ref|ZP_07163147.1| KamA family protein [Escherichia coli MS 116-1] gi|300957803|ref|ZP_07169983.1| KamA family protein [Escherichia coli MS 175-1] gi|301646590|ref|ZP_07246457.1| KamA family protein [Escherichia coli MS 146-1] gi|307140841|ref|ZP_07500197.1| hypothetical protein EcolH7_22227 [Escherichia coli H736] gi|312974047|ref|ZP_07788218.1| kamA family protein [Escherichia coli 1827-70] gi|331644894|ref|ZP_08346011.1| putative radical SAM domain protein [Escherichia coli H736] gi|188491201|gb|EDU66304.1| KamA family protein [Escherichia coli 53638] gi|226840266|gb|EEH72268.1| KamA family protein [Escherichia sp. 1_1_43] gi|300315484|gb|EFJ65268.1| KamA family protein [Escherichia coli MS 175-1] gi|300451442|gb|EFK15062.1| KamA family protein [Escherichia coli MS 116-1] gi|301075207|gb|EFK90013.1| KamA family protein [Escherichia coli MS 146-1] gi|309704652|emb|CBJ04002.1| radical SAM superfamily protein [Escherichia coli ETEC H10407] gi|310331581|gb|EFP98837.1| kamA family protein [Escherichia coli 1827-70] gi|323935461|gb|EGB31799.1| KamA family protein [Escherichia coli E1520] gi|331035869|gb|EGI08107.1| putative radical SAM domain protein [Escherichia coli H736] Length = 342 Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 93/274 (33%), Positives = 150/274 (54%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+ +ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ L +SG P ++ G K +D Sbjct: 303 ARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLD 336 >gi|91228408|ref|ZP_01262334.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01] gi|254230273|ref|ZP_04923663.1| lysine 2;3-aminomutase [Vibrio sp. Ex25] gi|262393005|ref|YP_003284859.1| lysine 2,3-aminomutase [Vibrio sp. Ex25] gi|269966836|ref|ZP_06180909.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91188049|gb|EAS74355.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01] gi|151937210|gb|EDN56078.1| lysine 2;3-aminomutase [Vibrio sp. Ex25] gi|262336599|gb|ACY50394.1| lysine 2,3-aminomutase [Vibrio sp. Ex25] gi|269828503|gb|EEZ82764.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 340 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 91/275 (33%), Positives = 150/275 (54%), Gaps = 3/275 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P +E + P DP+ + ++ + G++H+Y +R L+ + C V CR Sbjct: 67 NPKDPLLRQVLPLSDEFEVHPGYSNDPLEEQDNE-VPGLLHKYRNRALMIVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + Sbjct: 126 YCFRRHFPYQENKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 +I H++ LR HSR+P+V P R+ EL Q L+ + + + H NH E ++E + +L Sbjct: 184 HIPHIKRLRIHSRLPVVIPARVTDELCQLLQASRLQIILVTHINHANEINDEFAEQMFKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+Q VLLKG+ND E L + I PYYLH D G +H+ ++ EE Sbjct: 244 KRAGVTLLNQGVLLKGVNDSVEAQVALSEALFDAGILPYYLHVLDKVQGAAHYFISDEEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + I+ L ++SG P ++ G K +D H Sbjct: 304 KAIMRGLITRVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|226951346|ref|ZP_03821810.1| aminomutase [Acinetobacter sp. ATCC 27244] gi|226837868|gb|EEH70251.1| aminomutase [Acinetobacter sp. ATCC 27244] Length = 338 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 93/272 (34%), Positives = 147/272 (54%), Gaps = 2/272 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P DP+ Q +P EL PE DP+G+ + + G++H+Y R LL L C ++CR Sbjct: 63 DPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQMAGVLHKYRSRFLLTLTGACAIHCR 122 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + D E YI++ I EVI +GGDPL L+++++ L+ L Sbjct: 123 YCFRRHF--PYQENLPKNDDWENIKHYIEQNPLINEVILSGGDPLTLNNRKISLWLERLA 180 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 + ++ILR HSRVPIV P R++ ELI LK + + + +H+NH E + + + +L Sbjct: 181 SLPQIKILRIHSRVPIVIPNRVDEELISILKNSRLRIIVVVHSNHAAELDDFTCSKLLQL 240 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + I +L+Q+VLLKG+ND + L L + R+ PYYLH D G HF L E Sbjct: 241 SLHHITVLNQAVLLKGVNDSAKTLTELSNRLFDARVMPYYLHVLDKVKGAQHFDLRSSEI 300 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 I + + + G P + ++ G K + Sbjct: 301 DHIYSDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|15639115|ref|NP_218561.1| hypothetical protein TP0121 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025355|ref|YP_001933127.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum SS14] gi|4033488|sp|O83158|Y121_TREPA RecName: Full=Uncharacterized KamA family protein TP_0121 gi|3322385|gb|AAC65111.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189017930|gb|ACD70548.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum SS14] gi|291059540|gb|ADD72275.1| putative radical SAM domain protein [Treponema pallidum subsp. pallidum str. Chicago] Length = 355 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 92/266 (34%), Positives = 143/266 (53%), Gaps = 9/266 (3%) Query: 64 KEELNILPEER-------EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116 K ++ P+ER DP+G++ + +VH+Y +R+L+ C +CR+CFRR Sbjct: 60 KRQVCFAPQERVVHACECADPLGEDRYCVTPFLVHQYANRVLMLATGRCFSHCRYCFRRG 119 Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 + + G + +++ E + Y++ + E++ +GGDPL S ++ + + LR + Sbjct: 120 FIAQRAGWI-PNEEREKIITYLRATPSVKEILVSGGDPLTGSFAQVTSLFRALRSVAPDL 178 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 I+R +R PQ PELI L+E KPV+I H NHP E A + AG+ Sbjct: 179 IIRLCTRAVTFAPQAFTPELIAFLQEM-KPVWIIPHINHPAELGSTQRAVLEACVGAGLP 237 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 + SQSVLL+G+ND E L L L +KP YL DLA GT FR+ + + + + Sbjct: 238 VQSQSVLLRGVNDSVETLCTLFHALTCLGVKPGYLFQLDLAPGTGDFRVPLSDTLALWRT 297 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322 LKE++SGL P +DLPGG GK + Sbjct: 298 LKERLSGLSLPTLAVDLPGGGGKFPL 323 >gi|257063931|ref|YP_003143603.1| KamA family protein [Slackia heliotrinireducens DSM 20476] gi|256791584|gb|ACV22254.1| KamA family protein [Slackia heliotrinireducens DSM 20476] Length = 407 Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 103/295 (34%), Positives = 164/295 (55%), Gaps = 10/295 (3%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 ++ I +Y + + P +L+NP++P+DP+ R IP EEL+ D G++ + L Sbjct: 40 LESIQENYPLLVNPYYLSLVNPNDPDDPVRRMCIPAAEELDF--SGLADTSGESKSTVLP 97 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 G+ H+Y + L+ + C +YCR CFRR +VG + ++ +A YI++ +I V Sbjct: 98 GLQHKYAETALVLSTNQCAMYCRHCFRRRLVGRDADETV--RNIDAVADYIRDHEEITNV 155 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGK 205 + +GGD L+ S++ L + L+ L I H++ +R +R+P+V PQRI +P LI L Sbjct: 156 LISGGDALMNSNETLFRYLEALAPIPHLKTIRLGTRIPVVLPQRITDDPGLIDLLSGFNH 215 Query: 206 PV--YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 V ++ NHP E + E+ AI L GI + +Q+VLLKG+ND PE LA LM V Sbjct: 216 IVQLHVVTQFNHPNEITPESRDAIRILLELGIPVRNQTVLLKGVNDTPETLARLMDDLVG 275 Query: 264 LRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGG 316 + I PYY+ G + F++ I G IVA + ++SGL + F YI+ G Sbjct: 276 IGIVPYYVFQCRPTVGVKNRFQVPILTGCNIVAQARAQLSGLAKSFRYIMSHDAG 330 >gi|282890405|ref|ZP_06298933.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499787|gb|EFB42078.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 326 Score = 171 bits (433), Expect = 1e-40, Method: Compositional matrix adjust. Identities = 93/281 (33%), Positives = 144/281 (51%), Gaps = 5/281 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 + + L +A I + +DPI +QF+P E L DP+GD + ++H+Y Sbjct: 43 FPLNLPKRLAEKIKKNTLDDPILKQFLPTLAEQKQLAGFTLDPVGDTQFTKAPKLLHKYN 102 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R L+ C + CRFCFR+ + K + L I + E+I +GGDP Sbjct: 103 GRALIVCTSACVMNCRFCFRQNF-----DYEVQEKGFQKELELIAADETLQEIILSGGDP 157 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L LS L +L L +IKHV+ +RFH+R PI P+RI+ + + + +H N Sbjct: 158 LSLSDTVLVHLLDALSHIKHVKRVRFHTRFPIGIPERIDDAFLNLFENRPFITWFVLHTN 217 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 HP E + + L G+ILL+QSVLLKG+ND P++L L V I PYYLH Sbjct: 218 HPNELDDHIFHHLHLLQRKGVILLTQSVLLKGVNDCPKVLCELFNQLVNRGIIPYYLHQL 277 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 D G +HF ++ E G++++ + + + G P Y+ ++ G Sbjct: 278 DRVQGGAHFEVSEERGKELIQEIAKSLPGYAVPKYVREIAG 318 >gi|332977595|gb|EGK14363.1| KamA family protein [Psychrobacter sp. 1501(2011)] Length = 371 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 88/276 (31%), Positives = 148/276 (53%), Gaps = 2/276 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P DP+ Q +P K E + DP+ +N +P+KG++H+Y R+L+ + C ++CR Sbjct: 96 DPKDPLLLQVLPSKLEQAKISGYVTDPLAENEQNPIKGLLHKYHSRVLVTVTGACAIHCR 155 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFR+ +G + S+ E YI + +I EV+ +GGDPL LS++RL L L Sbjct: 156 YCFRQHF--DYQGNLPKSEQLELIQDYISQHPEIREVLLSGGDPLSLSNRRLFLWLDALE 213 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 + + +R H+R+PIV P+R++ EL+ L+ + + + +H NH E E + + Sbjct: 214 ALPQISTIRIHTRLPIVIPERLDSELLSRLQASRCRIVMVVHTNHANEIDEHTANYLLQA 273 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 GI LL+Q+VLL GIND + +L + PYYLH D G +HF +T Sbjct: 274 RQKGITLLNQTVLLAGINDSVSVQVDLSERLFAAGVLPYYLHLLDKVEGAAHFDMTQRRA 333 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 ++ + +++ G P + +LP K +D +N Sbjct: 334 VELYWEMLQQLPGYLVPKLVQELPNRPFKTPVDLYN 369 >gi|258625680|ref|ZP_05720559.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258581918|gb|EEW06788.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 340 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 98/276 (35%), Positives = 149/276 (53%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P E P DP+ + N++ + G++H+Y +R LL + C + CR Sbjct: 67 NPYDPLLRQVLPLGAEFEAHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI + Q+ EVIF+GGDPL+ L +++ + Sbjct: 126 YCFRRHFPYEDNKG---SKVIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLVERI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI EL++ + V + H NH E + E ++R Sbjct: 183 ATIPHIKRLRIHSRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMAR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLLKG+N+ E L T + I PYYLH D G +HF + +E Sbjct: 243 LRAINVTLLNQGVLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVGDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A L E++SG P ++ G K +D H Sbjct: 303 ARQIMAGLIERVSGYLVPKLTREIGGKPSKTPLDLH 338 >gi|317493548|ref|ZP_07951969.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918491|gb|EFV39829.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 344 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 95/291 (32%), Positives = 155/291 (53%), Gaps = 5/291 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRY 93 +++ + A + +PNDP+ Q + E P DP+ + + + + G++H+Y Sbjct: 51 FALRVPYAFARRMKKGDPNDPLLLQVMTSASEFITTPGYSTDPLEEQDDAIAVPGLLHKY 110 Query: 94 PDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 +R LL + C V CR+CFRR +G + + AL YI+++ ++ E+IF+GG Sbjct: 111 INRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKANWRQALDYIRQQPELDEIIFSGG 167 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 DPL+ L +L + I H++ LR HSR+P+V P RI L + ++ + + H Sbjct: 168 DPLMAKDHELAWLLDEIEAIPHIKRLRIHSRLPVVIPARITETLTKRFSQSHLQILLVTH 227 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 NH E E A++RL +AG+ LL+Q VLL+G+ND+ + LA L + I PYYLH Sbjct: 228 INHANEIDRELCDAMTRLKHAGVTLLNQGVLLRGVNDNADTLAALSNALFDAGIMPYYLH 287 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D G +HF ++ +E + I+ L K+SG P ++ G K ID Sbjct: 288 VLDRVQGAAHFMVSDDEARVIMRELMTKVSGYMVPKLTREIGGEPSKTPID 338 >gi|89075329|ref|ZP_01161751.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34] gi|89048878|gb|EAR54447.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34] Length = 340 Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 147/274 (53%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ +P ++E + DP+ + + + G++H+Y +R+LL + C V CR Sbjct: 67 NPHDPLLRQILPLEQEFEVHQGYSIDPLKEQQND-IPGLLHKYHNRVLLIVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + +L YI +I EVI +GGDPL+ LQ +++ + Sbjct: 126 YCFRRHFPYSDNKG---NKHQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLVEHI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI L Q L E + H NH E + A+ + Sbjct: 183 AAIPHIKRLRIHSRLPVVIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMGK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L A + LL+Q VLLKG+ND + L +L + I+PYYLH D G +HF + E Sbjct: 243 LKQANVTLLNQGVLLKGVNDSVKALTDLSEALFDAGIQPYYLHVLDRVQGAAHFMIDDET 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++++A L ++SG P ++ G K +D Sbjct: 303 ARQLIAGLITQVSGYLVPKLTREIGGRASKTPLD 336 >gi|22124525|ref|NP_667948.1| hypothetical protein y0611 [Yersinia pestis KIM 10] gi|45440363|ref|NP_991902.1| hypothetical protein YP_0509 [Yersinia pestis biovar Microtus str. 91001] gi|51594759|ref|YP_068950.1| hypothetical protein YPTB0407 [Yersinia pseudotuberculosis IP 32953] gi|108809919|ref|YP_653835.1| hypothetical protein YPA_3929 [Yersinia pestis Antiqua] gi|108813477|ref|YP_649244.1| hypothetical protein YPN_3317 [Yersinia pestis Nepal516] gi|145600867|ref|YP_001164943.1| hypothetical protein YPDSF_3620 [Yersinia pestis Pestoides F] gi|150260603|ref|ZP_01917331.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125] gi|153950672|ref|YP_001402627.1| KamA family iron-sulfur cluster-binding protein [Yersinia pseudotuberculosis IP 31758] gi|218927556|ref|YP_002345431.1| hypothetical protein YPO0353 [Yersinia pestis CO92] gi|229836612|ref|ZP_04456778.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A] gi|229840221|ref|ZP_04460380.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842302|ref|ZP_04462457.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str. India 195] gi|229903959|ref|ZP_04519072.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516] gi|21957321|gb|AAM84199.1|AE013663_5 hypothetical protein y0611 [Yersinia pestis KIM 10] gi|45435219|gb|AAS60779.1| Lysine 2,3-aminomutase [Yersinia pestis biovar Microtus str. 91001] gi|51588041|emb|CAH19647.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|108777125|gb|ABG19644.1| L-lysine 2,3-aminomutase [Yersinia pestis Nepal516] gi|108781832|gb|ABG15890.1| L-lysine 2,3-aminomutase [Yersinia pestis Antiqua] gi|115346167|emb|CAL19035.1| conserved hypothetical protein [Yersinia pestis CO92] gi|145212563|gb|ABP41970.1| L-lysine 2,3-aminomutase [Yersinia pestis Pestoides F] gi|149290011|gb|EDM40088.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125] gi|152962167|gb|ABS49628.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pseudotuberculosis IP 31758] gi|229679729|gb|EEO75832.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516] gi|229690612|gb|EEO82666.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str. India 195] gi|229696587|gb|EEO86634.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706296|gb|EEO92304.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A] gi|320013781|gb|ADV97352.1| lysine 2,3-aminomutase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 342 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P N +DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 63 MQPGNASDPLLLQVLTAREEFITAPGFTHDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 121 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L + Sbjct: 122 VNCRYCFRRHFPYQDNQG---NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWL 178 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L L IKH++ LR H+R+P+V P RI L Q L + V + H NH E Sbjct: 179 LDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRD 238 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 +++RL AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF + Sbjct: 239 SMARLKQAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 298 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E ++++ L ++SG P ++ G K +D Sbjct: 299 DDDEARQLMKGLLSRVSGYLVPRLTREVGGEPSKTPLD 336 >gi|90020728|ref|YP_526555.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40] gi|89950328|gb|ABD80343.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40] Length = 346 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 98/300 (32%), Positives = 148/300 (49%), Gaps = 4/300 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 + + +T A+ I P + +DP+ RQ +P EL DP+ + + +P G++H+Y Sbjct: 49 FPLRVTQSYASRIKPGDVDDPLLRQVLPLGAELTSPASYTADPLAEQSFNPAPGVIHKYH 108 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R+LL C + CR+CFRR + S + + AL YI + I EVI +GGDP Sbjct: 109 GRVLLISASQCAINCRYCFRRHF--DYQTNTPSRAEWQEALRYIADNESIDEVILSGGDP 166 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L +S +++Q ++ + I HV LR H+R+P+V P RI EL+ L + I +H N Sbjct: 167 LAVSDRQMQWLVNQIAVIPHVTRLRIHTRLPVVLPNRITSELVDTLVKTRLQCVIVVHIN 226 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 H E E + L A I LL+QSVLLKG+ND L +L + I PYYLH Sbjct: 227 HAAEIDEHVHNRLKILKKANITLLNQSVLLKGVNDSASCLVSLSKRLFSCGILPYYLHLL 286 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI--DTHNIKKVGN 332 D G +HF + + L + G P + ++P K + HN+ N Sbjct: 287 DKVTGAAHFDVDEASAIALHNHLLATLPGYLVPKLVREVPNAASKTAVYGAEHNLGYTNN 346 >gi|162419358|ref|YP_001605297.1| KamA family iron-sulfur cluster-binding protein [Yersinia pestis Angola] gi|165926739|ref|ZP_02222571.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Orientalis str. F1991016] gi|165936461|ref|ZP_02225029.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Orientalis str. IP275] gi|166011849|ref|ZP_02232747.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Antiqua str. E1979001] gi|166214027|ref|ZP_02240062.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Antiqua str. B42003004] gi|167400635|ref|ZP_02306144.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419290|ref|ZP_02311043.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423829|ref|ZP_02315582.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026033|ref|YP_001722538.1| lysine 2,3-aminomutase YodO family protein [Yersinia pseudotuberculosis YPIII] gi|186893766|ref|YP_001870878.1| lysine 2,3-aminomutase YodO family protein [Yersinia pseudotuberculosis PB1/+] gi|270489053|ref|ZP_06206127.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27] gi|294502464|ref|YP_003566526.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis Z176003] gi|162352173|gb|ABX86121.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis Angola] gi|165915577|gb|EDR34186.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Orientalis str. IP275] gi|165921362|gb|EDR38586.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Orientalis str. F1991016] gi|165989208|gb|EDR41509.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Antiqua str. E1979001] gi|166204822|gb|EDR49302.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Antiqua str. B42003004] gi|166963284|gb|EDR59305.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050003|gb|EDR61411.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057999|gb|EDR67745.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752567|gb|ACA70085.1| lysine 2,3-aminomutase YodO family protein [Yersinia pseudotuberculosis YPIII] gi|186696792|gb|ACC87421.1| lysine 2,3-aminomutase YodO family protein [Yersinia pseudotuberculosis PB1/+] gi|262360494|gb|ACY57215.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis D106004] gi|270337557|gb|EFA48334.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27] gi|294352923|gb|ADE63264.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis Z176003] Length = 334 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P N +DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 55 MQPGNASDPLLLQVLTAREEFITAPGFTHDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L + Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWL 170 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L L IKH++ LR H+R+P+V P RI L Q L + V + H NH E Sbjct: 171 LDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRD 230 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 +++RL AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF + Sbjct: 231 SMARLKQAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E ++++ L ++SG P ++ G K +D Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLTREVGGEPSKTPLD 328 >gi|330444985|ref|ZP_08308639.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328493103|dbj|GAA03136.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 340 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 146/274 (53%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P +E + DP+ + + + G++H+Y +R+LL + C V CR Sbjct: 67 NPYDPLLRQILPLAQEFEVHQGYSVDPL-EEQQNEIPGLLHKYHNRVLLIVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + + +L YI +I EVI +GGDPL+ LQ +++ + Sbjct: 126 YCFRRHFPYSDNKG---NKRQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLIEHI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI L Q L E + H NH E + A+ + Sbjct: 183 AAIPHIKRLRIHSRLPVVIPNRITDALCQILTETRLQTILVTHINHANEIDDALKTAMQK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L A + LL+Q VLLKG+ND L +L T + I+PYYLH D G +HF + E Sbjct: 243 LKQANVTLLNQGVLLKGVNDSVAALTDLSETLFDAGIQPYYLHVLDRVQGAAHFMVDDEI 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++++A L K+SG P ++ G K +D Sbjct: 303 ARQLMAGLITKVSGYLVPKLTREIGGRASKTPLD 336 >gi|262364441|gb|ACY60998.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis D182038] Length = 334 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 96/278 (34%), Positives = 151/278 (54%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P N +DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 55 MQPGNASDPLLLQVLTAREEFITAPGFTHDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L + Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWLKALDYIRQHPELDEIIFSGGDPLMAKDHELSWL 170 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L L IKH++ LR H+R+P+V P RI L Q L + V + H NH E Sbjct: 171 LDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRD 230 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 +++RL AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF + Sbjct: 231 SMARLKQAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E ++++ L ++SG P ++ G K +D Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLTREVGGEPSKTPLD 328 >gi|332994506|gb|AEF04561.1| lysine 2,3-aminomutase YodO family protein [Alteromonas sp. SN2] Length = 341 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 93/283 (32%), Positives = 153/283 (54%), Gaps = 3/283 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A+L+ NPNDP+ Q +P K+E +I P +DP+ +++ + KG++H+Y R+LL + Sbjct: 59 FASLMEKGNPNDPLFLQVMPLKQEFSIEPGYTKDPLEEHDTAG-KGLLHKYDSRVLLMVR 117 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C V CR+CFRR + ++ + AL YI I EVIF+GGDPL+ L Sbjct: 118 TGCAVNCRYCFRRHFPYADNA--VNKAQWQEALDYIAGNPAINEVIFSGGDPLMAKDDHL 175 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 + K + I H++ LR H+R+P+V P+R++ + + +HANH E S Sbjct: 176 AALAKEIAAIPHIKRLRIHTRLPVVLPERLDNAFFDWFTQLPIQKILVLHANHSNEVSPA 235 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 + + +L G+ LL+QSVLLK +ND + + L + + PYYLH D G SH Sbjct: 236 LKSRLEKLRTHGVTLLNQSVLLKDVNDSADAVCELSERLFDAGVMPYYLHVLDKVEGASH 295 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 F ++ ++ ++I+ +++ G P + ++ GK ID H Sbjct: 296 FYVSDDKARQIMQEAIKRLPGFLVPKLVREIGAQPGKTPIDLH 338 >gi|238784793|ref|ZP_04628795.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC 43970] gi|238714306|gb|EEQ06316.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC 43970] Length = 335 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 94/278 (33%), Positives = 151/278 (54%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P +P DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 55 MQPGDPFDPLLLQVLTAREEFIAAPGFTNDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L + Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWL 170 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L L I H++ LR H+R+P+V P RI L Q L ++ V + H NH E + Sbjct: 171 LDELESISHIKRLRIHTRLPVVIPARITAALCQRLSDSRLQVLMVTHINHANEIDQPLRD 230 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 ++++L AG+ LL+QSVLL+G+N+D E+L L + I PYY+H D G +HF + Sbjct: 231 SMAQLKQAGVTLLNQSVLLRGVNNDAEVLTTLSNALFDAGILPYYIHVLDKVQGAAHFMV 290 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E ++++ L ++SG P ++ G K +D Sbjct: 291 DDDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLD 328 >gi|153875802|ref|ZP_02003435.1| Protein of unknown function DUF160 [Beggiatoa sp. PS] gi|152067734|gb|EDN66565.1| Protein of unknown function DUF160 [Beggiatoa sp. PS] Length = 334 Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 92/265 (34%), Positives = 145/265 (54%), Gaps = 5/265 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +PNDP+ RQ +P +E + DP+GD+ + G++ +Y RIL C ++CR Sbjct: 67 DPNDPLLRQVLPLIDEQKQVLGFGVDPVGDSAAEKVPGLLQKYQGRILWLTTTACAIHCR 126 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFR+ S+ + + L I+ + I EVI +GGDPL+L L ++ K+L Sbjct: 127 YCFRQHYPTSK-----TKLYYQRVLDTIRADTSITEVILSGGDPLMLLDSDLAEMAKSLA 181 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I VQ LR H+R+PIV P R+N EL+ L E + + +HANH E E +A+ +L Sbjct: 182 DIPQVQRLRLHTRLPIVLPTRVNNELLTWLTETRLQLIVVVHANHANEIDNEVKSALQKL 241 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AGI +L+QSVLL+GIND+ L L + R+ PYYLH D G +HF + + Sbjct: 242 VTAGITVLNQSVLLRGINDNATALMALSEILFDSRVLPYYLHVLDRVQGAAHFEVPEQTA 301 Query: 291 QKIVASLKEKISGLCQPFYILDLPG 315 +++ ++ + G P + ++ G Sbjct: 302 LELLEKMRVALPGYLVPKLVREVTG 326 >gi|13474986|ref|NP_106545.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099] gi|14025732|dbj|BAB52331.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099] Length = 427 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 104/303 (34%), Positives = 162/303 (53%), Gaps = 21/303 (6%) Query: 36 SIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEE---REDPIGDNNHSPLKGIVH 91 ++ +TP + NLI+ N DPI +QFIP EL LP + D + + SP+ G+VH Sbjct: 56 ALRITPYLLNLIDWSNFLEDPIRKQFIPVGSEL--LPSHPLLKMDSLHERKSSPVDGLVH 113 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EAALAYIQEKSQIW 145 RY D++LL CPVYCRFC R VG +VL K + + LAY++ I Sbjct: 114 RYKDKVLLLATDRCPVYCRFCTRSYSVGLDTQSVLKKKVSPFQSRWDTILAYLRVTPVIA 173 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-----LIQCL 200 +V+ +GGD L RL + L I ++ +RF ++ V P +I + + + Sbjct: 174 DVVVSGGDCFRLKPSRLLAIGMGLLSIPSIRRIRFATKGLAVLPMKITSDHKWTDALVNI 233 Query: 201 KEAGKPVYIAI----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 +AG+ + I H NHP E ++ IAA L GI + +QSVL+ G+NDDPE++ Sbjct: 234 SDAGRDQGVEISFHTHFNHPREITDYTIAAAELLFKRGIRMRNQSVLMAGVNDDPEVMKQ 293 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L++ +L I+PYY++ DL G H R ++ +I +++ +G P +++D PGG Sbjct: 294 LVKKLSDLHIQPYYVYTCDLVDGIEHMRCSVRLACQIEKAVRGITAGYNTPLFVVDTPGG 353 Query: 317 YGK 319 GK Sbjct: 354 GGK 356 >gi|121998759|ref|YP_001003546.1| lysine 2,3-aminomutase YodO family protein [Halorhodospira halophila SL1] gi|121590164|gb|ABM62744.1| L-lysine 2,3-aminomutase [Halorhodospira halophila SL1] Length = 342 Score = 170 bits (431), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 95/276 (34%), Positives = 142/276 (51%), Gaps = 6/276 (2%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I P +PNDP+ RQ +P EL P DP+ + G++ +Y R LL C Sbjct: 68 IRPGDPNDPLLRQVLPIGAELETHPGYTADPLAEQGARTGSGVLQKYNGRSLLIATGGCA 127 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 ++CR+CFRR +++ AL +++ EVI +GGDPL+L + L L Sbjct: 128 IHCRYCFRRCFPYNREA------GWRTALDQLEQHGAPEEVILSGGDPLLLDDQALGACL 181 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + L I V+ +R H+R+P+V P R+ L + L + I +HANHP E E +A Sbjct: 182 ERLGRIAAVRRVRIHTRLPVVIPSRVTAALARHLGQIRLQSVIVVHANHPREIDAEVSSA 241 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 ++RL N +L+Q+VLL+G+NDD LA+L + PYYLH D AG +HF + Sbjct: 242 LARLRNVCSTVLNQTVLLRGVNDDTATLASLSERLFAADVLPYYLHLLDPVAGAAHFDVD 301 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + GQ++ A L + G P + PG K I Sbjct: 302 AKTGQRLWAELARSLPGYLVPRLAREEPGAAAKTVI 337 >gi|319789677|ref|YP_004151310.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio ammonificans HB-1] gi|317114179|gb|ADU96669.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio ammonificans HB-1] Length = 372 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 102/313 (32%), Positives = 170/313 (54%), Gaps = 12/313 (3%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K+L + + + E+ ++++E+ + + + A LI+ +PNDPI P + Sbjct: 7 KSLEEVEQAFGVKIPDSER-EKLQEVIEKHPMFIPDYYARLIDWSDPNDPIKNIIFPSLD 65 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL++ D G+ ++ L G+ H+Y + LL + + C YCR CFR+ +VG Sbjct: 66 ELDV--SGSYDTSGEKENTVLTGLQHKYKETALLLVTNRCAGYCRHCFRKRLVGIPTNET 123 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L D A+ YI+E +I V+ +GGDPL+L ++ L L I H++ +RF SRVP Sbjct: 124 LKLFD--RAVEYIKEHPEITNVLISGGDPLVLPTDVIEYFLSELSKIPHLKFIRFGSRVP 181 Query: 186 IVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 + P RI + +L++ + P VY+ H NHP E ++EA A+ L AG+ + +Q Sbjct: 182 VFYPMRIYEDTKLLEVFSKYSTPERRVYLVTHFNHPNEVTKEARKAVDSLIRAGVPVSNQ 241 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKE 299 +VLLKG+ND PE+LA LM+ + PYY+ ++ +HF++ ++EG IV K Sbjct: 242 TVLLKGVNDTPEVLATLMKEITSAGVIPYYVFQCRPVSRVKTHFQVPLKEGYWIVEGAKR 301 Query: 300 KISGLCQPF-YIL 311 + G + F YI+ Sbjct: 302 MLDGHAKRFKYIM 314 >gi|238793387|ref|ZP_04637013.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC 29909] gi|238727356|gb|EEQ18884.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC 29909] Length = 335 Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 149/274 (54%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P+DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C V CR Sbjct: 59 DPSDPLLLQVLTAREEFIAAPGFTTDPL-DEQRSVVPGLLHKYHNRALLLVKGGCAVNCR 117 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L +L L Sbjct: 118 YCFRRHFPYQDNQG---NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDEL 174 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR H+R+P+V P RI L Q L + V + H NH E + ++++ Sbjct: 175 ENIAHIKRLRIHTRLPVVIPDRITAALCQRLGDTRLQVLMVTHINHANEIDQPLRDSMAQ 234 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+GINDD E+LA L + I PYY+H D G +HF + +E Sbjct: 235 LKRAGVTLLNQSVLLRGINDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDE 294 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + ++ L ++SG P ++ G K +D Sbjct: 295 ARLLMKGLLCRVSGYLVPRLAREIGGELSKTPLD 328 >gi|294624428|ref|ZP_06703117.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601277|gb|EFF45325.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 342 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 93/267 (34%), Positives = 139/267 (52%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E+ P D +GD G++ +Y R LL C V+CR+C Sbjct: 75 HDPLLRQVLPLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYC 134 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR +++ + A+ I I EV+ +GGDPL L+ +L ++ L + Sbjct: 135 FRRHFPYAEETA--ARDGWRDAVVAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAV 192 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+PIV P+R++ L+ L+ PV +HANH EF AA L Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLRE 252 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AG LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF + + Sbjct: 253 AGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + A L ++SG P + ++PG GK Sbjct: 313 LHAELAARLSGYLVPRLVREIPGDTGK 339 >gi|149377740|ref|ZP_01895474.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893] gi|149357966|gb|EDM46454.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893] Length = 241 Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 88/239 (36%), Positives = 133/239 (55%), Gaps = 2/239 (0%) Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 P G++ +Y R LL + C + CR+CFRR + LS +D A+ + E +++ Sbjct: 2 PATGLIRKYDSRALLMVTGQCAINCRYCFRRHF--PYEDHRLSPEDRTQAIKTLSEDTRL 59 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 EVIF+GGDPL+ + + L + L I H++ LR H+R+P+V PQR+ LI+ L + Sbjct: 60 NEVIFSGGDPLVANDRLLSAWAEALAAIPHIRRLRVHTRLPVVIPQRVTDSLIKWLSGSR 119 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 + IH NHP E + A+ RL AGI LL+QSV+LKG+ND+ +LA L E Sbjct: 120 LQAVVVIHVNHPAELDADTQRALERLKAAGITLLNQSVVLKGVNDNARVLAELSERLFEC 179 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + PYYLH D AG HF ++ + + +V L + G P + ++PG GK +D Sbjct: 180 GVLPYYLHAFDPVAGAHHFEVSDNKARDLVRQLITLLPGFLVPRLVREIPGQSGKTPLD 238 >gi|88704864|ref|ZP_01102577.1| conserved hypothetical protein [Congregibacter litoralis KT71] gi|88701185|gb|EAQ98291.1| conserved hypothetical protein [Congregibacter litoralis KT71] Length = 345 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 100/277 (36%), Positives = 146/277 (52%), Gaps = 11/277 (3%) Query: 51 NPNDPIARQF--IPQKEELNILPEE--REDPIGDNN-HSPLKGIVHRYPDRILLKLLHVC 105 N DP+ RQ +PQ+ LP E +DP+G+ + ++ G++ +Y R LL C Sbjct: 67 NAWDPLLRQVLAVPQEN----LPAEGFSDDPVGETSLYADTPGVIQKYQGRALLVATGQC 122 Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR SSK+ AA+ + I EVI +GGDPL+L L + Sbjct: 123 AVNCRYCFRRSYPYGDNSQ--SSKERLAAIDTLLADPSIGEVILSGGDPLLLPDASLAAI 180 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 + LR LR H+R+PIV P R+ LI L + V + +H+NHP E + Sbjct: 181 ARRLRGNTRGITLRIHTRLPIVIPDRVTASLIDALMPREQRVVVVVHSNHPREIDHDTAR 240 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 A+ RL + G+ +L+QSVLLKGINDD ++LA L PYYLH D AG++HF + Sbjct: 241 ALERLRDGGVTVLNQSVLLKGINDDADVLAELSDQLFAAGAMPYYLHMLDKVAGSAHFEV 300 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + ++I+ L K G P +++PG K +I Sbjct: 301 SELRARQILGQLASKRPGYLVPKLAVEVPGADSKREI 337 >gi|82546608|ref|YP_410555.1| hypothetical protein SBO_4310 [Shigella boydii Sb227] gi|187731271|ref|YP_001882838.1| KamA family protein [Shigella boydii CDC 3083-94] gi|81248019|gb|ABB68727.1| conserved hypothetical protein [Shigella boydii Sb227] gi|187428263|gb|ACD07537.1| KamA family protein [Shigella boydii CDC 3083-94] gi|320176659|gb|EFW51700.1| Lysine 2,3-aminomutase [Shigella dysenteriae CDC 74-1112] gi|320187554|gb|EFW62238.1| Lysine 2,3-aminomutase [Shigella flexneri CDC 796-83] gi|332087151|gb|EGI92285.1| kamA family protein [Shigella boydii 3594-74] Length = 349 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 90/258 (34%), Positives = 144/258 (55%), Gaps = 5/258 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSQDEFVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG---NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+PIV P RI L++ + + + H NH E E A+++ Sbjct: 183 EAIPHIKRLRIHSRLPIVIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+QSVLL+ +ND+ + LANL + + PYYLH D G +HF ++ +E Sbjct: 243 LRRVGVTLLNQSVLLRDVNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDE 302 Query: 290 GQKIVASLKEKISGLCQP 307 ++I+ L +SG P Sbjct: 303 ARQIMRELLTLVSGYLVP 320 >gi|188535099|ref|YP_001908896.1| hypothetical protein ETA_29810 [Erwinia tasmaniensis Et1/99] gi|188030141|emb|CAO98027.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99] Length = 342 Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 97/289 (33%), Positives = 152/289 (52%), Gaps = 3/289 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A + +P DP+ Q I ++E P DP+ D S + G++H+Y Sbjct: 51 FALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPL-DEQSSVVPGLLHKYR 109 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF+GGDP Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIFSGGDP 167 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+ L ++ L +I H++ LR HSR+P+V P+RI L Q L ++ + H N Sbjct: 168 LMAKDHELDWLIAQLEHIPHIKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLMVTHIN 227 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 H E +E + L AG+ LL+QSVLL+ INDD LA L + I PYYLH Sbjct: 228 HAQEIDDELRHGMRMLKRAGVTLLNQSVLLRDINDDAVTLAALSNALFDAGILPYYLHVL 287 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D G +HF ++ E + IV L +SG P ++ G K +D Sbjct: 288 DKVQGAAHFYVSDERARAIVRELLTNVSGYMVPKLAREIGGEPSKTPLD 336 >gi|238756148|ref|ZP_04617468.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC 29473] gi|238705622|gb|EEP98019.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC 29473] Length = 334 Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 93/274 (33%), Positives = 150/274 (54%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + DP+ Q + +EE +P +DP+ D S + G++H+Y +R LL + C V CR Sbjct: 59 DAKDPLLLQVLTAREEFIAVPGFTDDPL-DEQRSVVPGLLHKYHNRALLLVKGGCAVNCR 117 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + + + AL YI + ++ E+IF+GGDPL+ L ++ L Sbjct: 118 YCFRRHFPYQDNQG---NKANWQQALDYIAQHPELDEIIFSGGDPLMAKDHELDWLITQL 174 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR H+R+P+V P RI L Q L ++ V + H NHP E + +++R Sbjct: 175 ENIAHIKRLRIHTRLPVVIPARITSTLCQRLLDSRLQVLLVTHINHPNEIDQSLCDSMAR 234 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+ +N+DP++LA L I PYY+H D G +HF + +E Sbjct: 235 LKQAGVTLLNQSVLLRDVNNDPDVLAALSHALFNAGILPYYIHVLDKVQGAAHFMVDDDE 294 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + ++ L ++SG P ++ G K +D Sbjct: 295 ARLLIKGLLSRVSGYLVPRLAREIGGEPSKTPLD 328 >gi|197286378|ref|YP_002152250.1| radical SAM superfamily protein [Proteus mirabilis HI4320] gi|194683865|emb|CAR45006.1| radical SAM superfamily protein [Proteus mirabilis HI4320] Length = 342 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 95/274 (34%), Positives = 148/274 (54%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +PNDP+ Q + E + P DP+ D + + G++H+Y +R LL + C V CR Sbjct: 67 DPNDPLLLQVLTAHAEFTLTPGFSTDPL-DEQQNAVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + + A+ YI+ ++ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYEDNKG---NKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI L Q L+++ + +H NH E + A + Sbjct: 183 EAIPHIKRLRIHSRLPVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDDALREACLK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L NA + LL+Q VLL+G+ND+ + LA+L R + I PYYLH D G +HF + E Sbjct: 243 LKNAHVTLLNQGVLLRGVNDNAQTLADLSRALFDAGIMPYYLHVLDKVQGAAHFMVPDSE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ SL +SG P ++ G K +D Sbjct: 303 AREIMKSLMSLVSGYMVPKLTREIGGEPSKTLLD 336 >gi|113461431|ref|YP_719500.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT] gi|112823474|gb|ABI25563.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT] Length = 337 Score = 169 bits (428), Expect = 5e-40, Method: Compositional matrix adjust. Identities = 99/258 (38%), Positives = 139/258 (53%), Gaps = 5/258 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ Q + + E + +DP+ + H+ + I+H+Y +R+LL + + C V CR Sbjct: 67 NPNDPLFLQVMASQHEFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + +L YI ++I EVIF+GGDPL+ L ++K L Sbjct: 126 YCFRRHFPYAENKG---NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKEL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H+ LR H+R+P+V PQRI EL + L E+ I H NHP E E A+ + Sbjct: 183 ENIPHLHTLRIHTRLPVVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L +A + LL+QSV+LK IND+ IL L + I PYYLH D G SHF L E Sbjct: 243 LKHANVTLLNQSVVLKNINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDES 302 Query: 290 GQKIVASLKEKISGLCQP 307 I L+ SG P Sbjct: 303 AAAIYKELQRISSGYLVP 320 >gi|297583799|ref|YP_003699579.1| lysine 2,3-aminomutase YodO family protein [Bacillus selenitireducens MLS10] gi|297142256|gb|ADH99013.1| lysine 2,3-aminomutase YodO family protein [Bacillus selenitireducens MLS10] Length = 386 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 98/292 (33%), Positives = 160/292 (54%), Gaps = 13/292 (4%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE--REDP 77 + E+ ++K+I+ + + LI+ +P DPI + IP + EL EE R D Sbjct: 16 LSDEEKAKLKQITEKFVFRVNEYYLGLIDWGDPKDPIRKLVIPNEGEL----EEYGRWDA 71 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 ++ + + G H+Y + LL + VC YCR+CFR+ + + +S D + + Y Sbjct: 72 SDEDTNYVVPGCQHKYDETALLIVSEVCGAYCRYCFRKRLFRNDIKEAMS--DVQPGIDY 129 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE 195 I+E +I V+ TGGD LIL+ K+L+ +++ LR I HV+I+R S++P+ +P RI + E Sbjct: 130 IKEHPEISNVLLTGGDSLILATKKLRFIIEQLREIPHVKIIRLGSKMPVFNPMRIYEDQE 189 Query: 196 LIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 L+ + E + +Y+ H NHP E + EA L NAG I+++Q+ +L+GINDDP Sbjct: 190 LLDLISEYSTTEQRIYVMAHINHPNEITPEAKKGFDALHNAGAIVVNQTPVLRGINDDPV 249 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +L L+ + PYY AG + F L+++E IV K + SGL Sbjct: 250 VLGELLDQLSWAGVTPYYFFINRPVAGNNEFVLSLKEAYDIVEEAKARTSGL 301 >gi|311695405|gb|ADP98278.1| lysine 2,3-aminomutase YodO family protein [marine bacterium HP15] Length = 346 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 93/279 (33%), Positives = 145/279 (51%), Gaps = 2/279 (0%) Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 N + NP DP+ RQ +P +E P DP+ ++ G++ +Y R LL + Sbjct: 67 NRMEKGNPADPLLRQVLPLADEAGHAPGFVSDPLEESGAIATTGLIRKYRSRALLMVTGQ 126 Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C + CR+CFRR ++ LS D + + + +I EVIF+GGDPL ++ + L + Sbjct: 127 CAINCRYCFRRHFPYDEQR--LSPHDRQRVIDVLGASPEINEVIFSGGDPLAVNDRLLSQ 184 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224 + I H++ LR H+R+P+V PQR+ EL++ L V I +H NHP E Sbjct: 185 WASAISGIPHIRRLRLHTRLPVVIPQRVCDELLKWLSTTPLQVVIVLHINHPAEIDGPTR 244 Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284 A+ L AG LL+QSV+L+G+ND +L L T + + PYYLH D G HF Sbjct: 245 RALGYLRAAGATLLNQSVILRGVNDRTAVLEELSETLFDAGVLPYYLHAFDPVTGAHHFD 304 Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++ +E + +V L ++ G P + + PG K I+ Sbjct: 305 VSDDEARNLVRELLARLPGFLVPKLVREEPGKESKTPIN 343 >gi|78486083|ref|YP_392008.1| hypothetical protein Tcr_1742 [Thiomicrospira crunogena XCL-2] gi|78364369|gb|ABB42334.1| L-lysine 2,3-aminomutase [Thiomicrospira crunogena XCL-2] Length = 323 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 92/274 (33%), Positives = 144/274 (52%), Gaps = 5/274 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 AN I +PNDP+ +Q +P E + P DP+GD +P ++H+Y R LL Sbjct: 35 FANQIEKGSPNDPLLKQILPGLAEQELYPGFSPDPVGDLAANPQPSLIHKYHGRALLIAS 94 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C ++CR+CFRR Q + +AAL I + I EVI +GGDP+ LS L Sbjct: 95 PRCDIHCRYCFRRHFPYEQA----KKQHWQAALENIAQDHSITEVILSGGDPMTLSENTL 150 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PELIQCLKEAGKPVYIAIHANHPYEFSE 221 +++ + I HV LR HSR PIV PQ+ + P L++ L ++ + +H NH E + Sbjct: 151 IELVHEIEAIPHVSTLRMHSRTPIVAPQKAHRPTLLKALSKSRLQTVLVVHCNHANELTP 210 Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281 E+ + + + + LL+Q+VLLKGIND + L+ L + I PYY H D +G+ Sbjct: 211 ESADLMQQFRQSNVFLLNQTVLLKGINDSADTLSALSKKLFSQGILPYYCHLLDKVSGSG 270 Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 HF + + I L++ + G P ++ ++ G Sbjct: 271 HFDVQKHQAWAIFDQLRQALPGYLVPRFVEEIAG 304 >gi|329296403|ref|ZP_08253739.1| putative lysine aminomutase [Plautia stali symbiont] Length = 342 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 96/274 (35%), Positives = 145/274 (52%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 N DP+ Q + ++E P DP+ D S + G++H+Y +R +L + C V CR Sbjct: 67 NAQDPLLLQVLTSRQEFTDAPGYSTDPL-DEQSSVVPGLLHKYKNRAMLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ +AA+ YI ++ E+IF+GGDPL+ + L ++ L Sbjct: 126 YCFRRHFPYQDNQG---NKRNWQAAIDYIAAHPELDEIIFSGGDPLMAKDQELAWLIGAL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P RI L Q L + V + H NH E E + R Sbjct: 183 ENIPHLKRLRIHSRLPVVIPARITEGLCQLLADTRLQVLLVSHINHAQEIDEALRERMQR 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+G+NDD + LA L + I PYYLH D G +HF + E+ Sbjct: 243 LKRAGVTLLNQSVLLRGVNDDAQTLAQLSNALFDAGILPYYLHVLDKVQGAAHFFVPDEQ 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + +V L +SG P ++ G K +D Sbjct: 303 ARALVRQLLTMVSGYMVPKLAREIGGEPSKTPLD 336 >gi|300715020|ref|YP_003739823.1| conserved uncharacterized protein [Erwinia billingiae Eb661] gi|299060856|emb|CAX57963.1| conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 342 Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 97/290 (33%), Positives = 154/290 (53%), Gaps = 5/290 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A+ + +P DP+ Q I +E P DP+ D S + G++H+Y Sbjct: 51 FALRVPRAFASRMQKGDPQDPLLLQVITASQEFVDAPGYSTDPL-DEQSSVVPGLLHKYR 109 Query: 95 DRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 +R LL + C V CR+CFRR +G + ++ + AL YI+E+ ++ E+IF+GGD Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQDNQG---NKRNWQQALEYIREQPELDEIIFSGGD 166 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+ L ++ L I H++ LR HSR+P+V P RI L Q L ++ V + H Sbjct: 167 PLMAKDSELDWLIGELEQIPHLKRLRIHSRLPVVIPSRITRTLCQRLAQSRLQVLMVTHI 226 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NH E + A+ L +AG+ LL+QSVLL+ INDD LA L + + PYYLH Sbjct: 227 NHAQEIDDALRDALQLLKSAGVTLLNQSVLLRNINDDATTLATLSNALFDAGVLPYYLHV 286 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D G +HF ++ ++ + I+ L +SG P ++ G K +D Sbjct: 287 LDKVQGAAHFYVSDDDARAIMRELLANVSGYMVPKLAREIGGEPSKTPLD 336 >gi|170718464|ref|YP_001783679.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus 2336] gi|168826593|gb|ACA31964.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus 2336] Length = 337 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 99/258 (38%), Positives = 139/258 (53%), Gaps = 5/258 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ Q + + E + +DP+ + H+ + I+H+Y +R+LL + + C V CR Sbjct: 67 NPNDPLFLQVMASQHEFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + +L YI ++I EVIF+GGDPL+ L ++K L Sbjct: 126 YCFRRHFPYAENKG---NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKEL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H+ LR H+R+P+V PQRI EL + L E+ I H NHP E E A+ + Sbjct: 183 ENIPHLHTLRIHTRLPVVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L +A + LL+QSV+LK IND+ IL L + I PYYLH D G SHF L E Sbjct: 243 LKHANVTLLNQSVVLKNINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDES 302 Query: 290 GQKIVASLKEKISGLCQP 307 I L+ SG P Sbjct: 303 AAAIYKELQRISSGYLVP 320 >gi|322831134|ref|YP_004211161.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602] gi|321166335|gb|ADW72034.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602] Length = 342 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 94/278 (33%), Positives = 150/278 (53%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P +P DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 63 MQPGDPQDPLLLQVLTAREEFIAAPGFTTDPL-DEQRSVVPGLLHKYSNRALLLVKGGCA 121 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + AL YI+ + ++ E+IF+GGDPL+ L + Sbjct: 122 VNCRYCFRRHFPYQDNQG---NKANWVQALDYIRTRPELDEIIFSGGDPLMAKDHELDWL 178 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 + L I H++ LR H+R+P+V P RI Q L+++ V + H NH E + A Sbjct: 179 IGELEGIAHIKRLRIHTRLPVVIPARITDVFCQRLEKSRLQVLMVTHINHANEINNALRA 238 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 ++++L G+ LL+QSVLL+G+ND ++LA L + I PYY+H D G +HF + Sbjct: 239 SMAKLKRHGVTLLNQSVLLRGVNDSADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 298 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +E + I+ L K+SG P ++ G K +D Sbjct: 299 NDDEARVIMKGLMSKVSGYMVPKLTREIGGEPSKTILD 336 >gi|156050603|ref|XP_001591263.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980] gi|154692289|gb|EDN92027.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980 UF-70] Length = 531 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 104/321 (32%), Positives = 172/321 (53%), Gaps = 20/321 (6%) Query: 19 LIKKEQIDEIKEISN--HYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEER 74 + +++ I+++KE SI L P I ++I+ NP +DPI RQFIP K +L P+ Sbjct: 161 ITREDFIEDVKEGIKLAPMSIRLPPHILSIIDWENPFDDPIRRQFIPMKSSKLEDHPKVE 220 Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------ 128 D + +++ SP++G VHRY D+ L CP+YCRFC R +G V + Sbjct: 221 LDSLHESDDSPVEGFVHRYYDKALFLATSQCPLYCRFCTRSWSIGPDMQNVKKTTFKPQR 280 Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188 K E YI++ Q+ +++ +GGD IL+ + ++ + + L I H++ RF ++ V Sbjct: 281 KRWEDIFTYIEDTPQLQDIVVSGGDCYILTAENIRLIGERLISIPHIKRFRFATKGLAVS 340 Query: 189 PQRI-------NPELIQC---LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 P RI E+I+ K+AGK + I H NHP E + + A+ RL + + Sbjct: 341 PARILDDSDGWAAEMIRLSALAKKAGKSMAIHTHFNHPREMTWVSRMALQRLHENNVTVR 400 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKG+NDD ++NL++T + I PYY++ D+ R + ++ ++ Sbjct: 401 NQTVLLKGVNDDVATMSNLIKTVADNNIIPYYVYQADMVQYVEDLRTPLSTILQLERHIR 460 Query: 299 EKISGLCQPFYILDLPGGYGK 319 I G P +++DLPGG GK Sbjct: 461 GSIGGFVTPNFVVDLPGGGGK 481 >gi|152994930|ref|YP_001339765.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1] gi|150835854|gb|ABR69830.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1] Length = 340 Score = 169 bits (427), Expect = 7e-40, Method: Compositional matrix adjust. Identities = 87/269 (32%), Positives = 147/269 (54%), Gaps = 2/269 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 N +DP+ Q +P E+ + +DP+ + +H+P K IVH+Y R+L+ C V CR Sbjct: 63 NVHDPLLLQVLPSLAEMQKVAGYTKDPLEEADHNPQKAIVHKYKRRLLVITTGTCAVNCR 122 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + L+ + ++ + Y+++ +I EVI +GGDPL++ L ++ L Sbjct: 123 YCFRRHFPYADNQ--LAQAEWQSVIDYLKDHPEINEVILSGGDPLMMKDSLLADKVRKLE 180 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 + ++ LR HSR+P+V P R+ ++++ +K + + + H NH E EE A +L Sbjct: 181 ALPQIKRLRIHSRLPVVIPNRVCDDMLEWIKVSRLDIVMVWHINHANEMDEELANAAYKL 240 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 +AG+ LL+Q VLLKG+ND E NL I PYY+ D G +HF + IE+ Sbjct: 241 KSAGVTLLNQGVLLKGVNDSVEAQVNLSEAVFSAGILPYYMFTLDPVEGAAHFDIAIEDA 300 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGK 319 Q+++ + ++ G P ++PG K Sbjct: 301 QELMGKVAAELPGYLVPRLAKEIPGKPAK 329 >gi|254482976|ref|ZP_05096212.1| KamA family protein [marine gamma proteobacterium HTCC2148] gi|214036848|gb|EEB77519.1| KamA family protein [marine gamma proteobacterium HTCC2148] Length = 346 Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 150/273 (54%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK-GIVHRYPDRILLKLLHVCPVYC 109 +P+DP+ RQ + EL +P +DP+G+ S G++ +Y R LL L C + C Sbjct: 64 DPDDPLLRQVLSVSAELLQVPGFGDDPVGETGDSITHPGVIQKYHGRALLILSGGCAINC 123 Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 R+CFRR ++ S ++ A+ +I + I EVI +GGDPL++S ++L+ ++ L Sbjct: 124 RYCFRRHFPYNENRN--SREEWLHAVRHIADDPSISEVILSGGDPLLVSDRQLKSLVGQL 181 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H+Q LR HSR+PIV P R+ L+ L + +H+NH E + E A+ + Sbjct: 182 AAIPHLQRLRVHSRLPIVLPSRVTAGLVNALTGTRLQSVLVVHSNHGNEINTEVKNALQK 241 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L++ I LL+Q+VLL GIND + LA+L + PYYLH D G +HF +T Sbjct: 242 LSSGKITLLNQAVLLAGINDTEDELADLSEQLFTAGVLPYYLHLLDRVRGAAHFEVTARR 301 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 G +++ L+ ++ G P + + G KV++ Sbjct: 302 GLELITQLENRLPGYLVPRLVREDAGELAKVRV 334 >gi|317148225|ref|XP_001822598.2| L-lysine 2,3-aminomutase [Aspergillus oryzae RIB40] Length = 453 Score = 168 bits (426), Expect = 9e-40, Method: Compositional matrix adjust. Identities = 102/302 (33%), Positives = 158/302 (52%), Gaps = 18/302 (5%) Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELN-ILPEEREDPIGDNNHSPLKGIVHRY 93 ++ LTP I +LIN +DPI RQFIP P+ + D + + + SP+KG+VHRY Sbjct: 107 AVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRY 166 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS------SKDTEAALAYIQEKSQIWEV 147 PD++L VCPVYCRFC R VG Q TV K E YI ++ +V Sbjct: 167 PDKVLFLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDV 226 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL---- 200 + +GGD L +L+++ TL I H++ +RF S+ V P RI + E + L Sbjct: 227 VVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRVLIEIS 286 Query: 201 ---KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 +E GK + + H NHP E S A +L + + + +Q+VLL +N++ + L Sbjct: 287 NRGREKGKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKRL 346 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 +R + I+PYY++ D+ G R + + I + ++ I+G P +++DLPGG Sbjct: 347 IRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGGG 406 Query: 318 GK 319 GK Sbjct: 407 GK 408 >gi|269103626|ref|ZP_06156323.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163524|gb|EEZ42020.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP 102761] Length = 340 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P ++E + DP+ + ++ + G++H+Y +R+L+ + C + CR Sbjct: 67 NPYDPLLRQVLPLEQEFEVHAGYSTDPLEEQDND-IPGLLHKYKNRVLMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YI ++ EVI +GGDPL+ L ++ + Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQQSLDYIANHPELDEVILSGGDPLMAKDHELAWLMDGI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR HSR+P+V P R+ P+L Q + V + H NH E + E A+ Sbjct: 183 EQIPHIKRLRIHSRLPVVLPSRVTPDLCQRFASSRLQVILVTHINHCNEINAELTLAMQN 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L +A + LL+Q VLLKG+ND + L NL + I PYYLH D G +HF + + Sbjct: 243 LKHANVTLLNQGVLLKGVNDSVQALINLSNRLFDAGILPYYLHVLDKVQGAAHFFVDDIQ 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + ++A L E +SG P ++ G K +D H Sbjct: 303 AKTLMAGLMENVSGYLVPQLTREIGGRSSKTPLDLH 338 >gi|56461377|ref|YP_156658.1| lysine 2,3-aminomutase [Idiomarina loihiensis L2TR] gi|56180387|gb|AAV83109.1| Probable lysine 2,3-aminomutase [Idiomarina loihiensis L2TR] Length = 348 Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 93/272 (34%), Positives = 140/272 (51%), Gaps = 3/272 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + NDP+ RQ +P E P DP+ + P+ G++H+Y R+LL L C V CR Sbjct: 67 DSNDPLLRQVLPLHNEFESEPGYSTDPLQEQ-QGPVNGLLHKYKSRVLLILQGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + S + L YI++ +I EVI +GGDPL+ +RL+ ++ Sbjct: 126 YCFRRHFPYDE--LTFSKRQLTETLEYIRQHPEINEVILSGGDPLMAKDERLKGLINEFE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 + + LR HSR+P+V P R+ +L + L + + +HANH E S E A+ Sbjct: 184 LLPQLTRLRIHSRLPVVIPSRLTHKLKEVLSNSRLQSVLVLHANHANEISPELAGALDDW 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 +AGI LL+QSVLL G+ND+ L L R+ PYYLH D G SHF ++ E+ Sbjct: 244 HHAGIHLLNQSVLLSGVNDNLTALIELSEKLFSARVMPYYLHQLDKVEGASHFAVSDEKA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 Q + + ++ G P + + G K I Sbjct: 304 QALWQKMTHELPGFLVPRLVREEAGELSKTAI 335 >gi|323495128|ref|ZP_08100214.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546] gi|323310629|gb|EGA63807.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546] Length = 340 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 91/276 (32%), Positives = 147/276 (53%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P EE + DP+ + N++ + G++H+Y +R L+ + C + CR Sbjct: 67 NPYDPLLRQVLPLSEEFEVHQGYSNDPLEEQNNA-IPGLLHKYRNRALMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L YIQ+ +I E+I +GGDPL+ L ++ + Sbjct: 126 YCFRRHFPYDENKG---SKSVWQTSLDYIQQHPEIDEIILSGGDPLMAKDDELSWLVARI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I+H++ LR HSR+P+V P RI +L L + V + H NH E + A+ + Sbjct: 183 ADIQHIKRLRIHSRLPVVIPARITEQLTDLLGQTRLQVILVTHINHAQEIDQTLANALDK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+Q V+LKG+ND L E + PYY+H D G +HF ++ ++ Sbjct: 243 LKQVGVTLLNQGVMLKGVNDSVSSQIALSNALFEAGVLPYYMHVLDKVQGAAHFFISDQQ 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A + E+ SG P ++ G K +D H Sbjct: 303 AKEIMAGVLEQTSGYLVPKLTREIGGRASKTPLDLH 338 >gi|126179733|ref|YP_001047698.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus marisnigri JR1] gi|125862527|gb|ABN57716.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1] Length = 386 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 94/292 (32%), Positives = 159/292 (54%), Gaps = 9/292 (3%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 I E+ + E+++ ++ +LI+ +P DPI R +P EEL P DP Sbjct: 29 IDPEERARLAEVTDLFAFRANDYYLSLIDWDDPADPIRRLIVPTVEELE--PWGHLDPSS 86 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 ++ ++ G+ H+Y + LL + +C CR+CFR+ + + V +KD A LAYI+ Sbjct: 87 EHRYTRAPGLQHKYRETALLLVSDLCGGLCRYCFRKRLFIEEAREV--NKDISAGLAYIR 144 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197 + +I V+ TGGDPL L R+ +++ +R I+HV I+R +++P +P RI +P L+ Sbjct: 145 DHPEITNVLLTGGDPLFLETGRVLDIVRQVREIEHVGIIRIGTKMPAYNPFRIINDPALL 204 Query: 198 QCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 +++ K +YI NHP E ++ A A++ L AG ++++Q+ L++GINDDPE+L Sbjct: 205 DMIRDYSMDEKRIYIMAQFNHPRELTDAACRAVALLQEAGAVVMNQTPLIRGINDDPEVL 264 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 A L + PYY+ A G F + +EE +I + SGL + Sbjct: 265 AALFDKLSFIGANPYYVFQCRPAIGNRTFAVPVEESYRIFEQARSICSGLAK 316 >gi|166711823|ref|ZP_02243030.1| hypothetical protein Xoryp_10295 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 342 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 92/267 (34%), Positives = 139/267 (52%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C Sbjct: 75 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 134 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR +++ + A+A I I EV+ +GGDPL L+ +L ++ L I Sbjct: 135 FRRHFPYAEESA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAI 192 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+PIV P+R++ L+ L+ PV +HANH EF A+ L + Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDTAMHALRD 252 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 G LL+Q+VLL G+ND + LA L + PYYLH D AG +HF + + Sbjct: 253 TGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVVPYYLHQLDRVAGVAHFEVDDARARA 312 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + L ++SG P + ++PG GK Sbjct: 313 LHTELATRLSGYLVPRLVREIPGDTGK 339 >gi|95928491|ref|ZP_01311238.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] gi|95135281|gb|EAT16933.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] Length = 393 Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 98/308 (31%), Positives = 165/308 (53%), Gaps = 9/308 (2%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TS +L + ++ +++ ++ + + + +LI+P++ +DPI + +P EEL Sbjct: 29 ITSVDELKAYLPLSYDEEADLRTVTEAHPMNIPRYYLSLIDPNDAHDPIRKLAVPAAEEL 88 Query: 68 NI---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 + + E +DP GD+ H GI+H+Y L+ C +YCR CFR+ MVG Sbjct: 89 VVAGAMGETTKDPYGDDKHDKGNGILHKYSYTALVVATEYCSMYCRHCFRKRMVGLPNHQ 148 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 + ++ A YI +I V+ +GGDPL+L ++K+L L I H+ +R SR Sbjct: 149 TV--ENFHNAAKYIAAHPEITNVVISGGDPLLLPTHVIRKMLAALEDIPHLNFVRIGSRA 206 Query: 185 PIVDPQRI-NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 P+V P R + ELI L++ G K + + H NHP E + EA AI R+ AG+ + +Q+ Sbjct: 207 PVVYPIRFADDELIDVLRDFGRKKTLQMPTHFNHPVELTSEAAEAIRRVREAGVTVNNQA 266 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEK 300 V L G+NDD E L LM + + + PYYL+ +A HF++ ++ G IV + + Sbjct: 267 VFLSGVNDDVETLTELMNGLLRIGVNPYYLYQCMPVARVRHHFQVPLKRGVDIVDEARRR 326 Query: 301 ISGLCQPF 308 + G + F Sbjct: 327 MDGYAKRF 334 >gi|209696199|ref|YP_002264129.1| hypothetical protein VSAL_I2793 [Aliivibrio salmonicida LFI1238] gi|208010152|emb|CAQ80477.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238] Length = 340 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 97/277 (35%), Positives = 148/277 (53%), Gaps = 7/277 (2%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 NP DP+ RQ +P +E + DP+ + +N P G++H+Y +R+LL L C V C Sbjct: 67 NPFDPLLRQVLPLDQEFEVHDGYSTDPLDEQDNEQP--GLLHKYKNRVLLILKGGCAVNC 124 Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 R+CFRR KG + ++ YI ++ EVI +GGDPL+ L+ +++ Sbjct: 125 RYCFRRHFPYEDNKG---GKSVWQNSINYIAAHPELNEVILSGGDPLMAKDHELEWLIQH 181 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 L + H++ LR HSR+P+V P RI L + E V + H NH E S ++ Sbjct: 182 LDKVPHIKRLRIHSRLPVVIPNRITDTLCRLFAETRLQVILVTHINHANEISPYFTDKMT 241 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288 +L A + LL+QSVLLKGIND + L NL + I PYYLH D G +HF ++ E Sbjct: 242 QLKQANVTLLNQSVLLKGINDTSKALTNLSEALFDAGILPYYLHVLDKVQGAAHFFVSDE 301 Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + ++++A L E +SG P ++ G K +D + Sbjct: 302 KAKELMAELIENVSGYLVPTLAREIGGRKSKTPLDLY 338 >gi|85711842|ref|ZP_01042897.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145] gi|85694239|gb|EAQ32182.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145] Length = 340 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 91/297 (30%), Positives = 150/297 (50%), Gaps = 6/297 (2%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGD----NNHSP 85 E +S + L+ NP DP+ RQ +P +E + P DP+ + H+ Sbjct: 42 EAKKLFSFRVPRPFVELMEAGNPQDPLLRQVLPLADEFTVTPGYSTDPLNEVTDKREHAV 101 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 +G++H+Y R+LL + C + CR+CFRR + VL K + + Y+++ ++ Sbjct: 102 PQGLLHKYASRVLLLVQGACAINCRYCFRRHYPYADD--VLPRKQFDECVEYVRQNQEVN 159 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 EVI +GGDPL + L ++ L +K ++ LR HSR+P+V PQR+ L L + + Sbjct: 160 EVILSGGDPLFANDGYLIELADKLAELKQIKRLRIHSRLPVVLPQRLTERLATHLTQRFE 219 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 V + IHANH E ++ G+ LL+QSVLLK INDD + L+ L + Sbjct: 220 QVILVIHANHANEIGSSLKQHLATWRQRGVTLLNQSVLLKAINDDADSLSQLSERLFDAS 279 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + PYYLH D G +HF ++ +++ + ++ G P + ++P K I Sbjct: 280 VLPYYLHQLDPVQGAAHFAISDARARELWQQINARLPGFLVPKLVREIPNRDSKTPI 336 >gi|167469180|ref|ZP_02333884.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis FV-1] Length = 315 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 93/262 (35%), Positives = 144/262 (54%), Gaps = 5/262 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P N +DP+ Q + +EE P DP+ D S + G++H+Y +R LL + C Sbjct: 55 MQPGNASDPLLLQVLTAREEFITAPGFTHDPL-DEQRSVVPGLLHKYRNRALLLVKGGCA 113 Query: 107 VYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR +G + + AL YI++ ++ E+IF+GGDPL+ L + Sbjct: 114 VNCRYCFRRHFPYQDNQG---NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWL 170 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L L IKH++ LR H+R+P+V P RI L Q L + V + H NH E Sbjct: 171 LDQLEDIKHIRRLRIHTRLPVVIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRD 230 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 +++RL AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF + Sbjct: 231 SMARLKQAGVTLLNQSVLLRGVNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMV 290 Query: 286 TIEEGQKIVASLKEKISGLCQP 307 +E +++ L ++SG P Sbjct: 291 DDDEAGQLMKGLLSRVSGYLVP 312 >gi|307352679|ref|YP_003893730.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus petrolearius DSM 11571] gi|307155912|gb|ADN35292.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus petrolearius DSM 11571] Length = 368 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 96/294 (32%), Positives = 154/294 (52%), Gaps = 8/294 (2%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + +E+ ++ E+ ++ +LI+ ++P DPI + IP EL R D G Sbjct: 16 LSEEEKKKLAEVQEMFAFRSNEYYLSLIDWNDPADPIRKLVIPDPAELEEWG--RLDASG 73 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + + G+ H+Y L+ + +C +CR+CFR+ + G ++D + L YI Sbjct: 74 EARYIVAPGMEHKYDQTALVLVSDMCAGFCRYCFRKRIF-MNGGAREVARDIDVDLEYIS 132 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----P 194 +I V+ +GGDPL LS RL+K++ +R I HVQI+R ++VP +P RI P Sbjct: 133 SHPEITNVLLSGGDPLFLSTNRLEKIIAWIREIDHVQIVRIGTKVPAYNPYRILNDTKLP 192 Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 E+I+ K +YI NHP E +E+AI A++ L +G + +Q+ LL GIND+PE + Sbjct: 193 EIIRRYSTEEKKIYIVTQFNHPRELTEQAIKAVNILQESGAVFANQTPLLHGINDNPETM 252 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 A L R + I PYY+ G F + +E+G I+ K SGL + F Sbjct: 253 AELSRKLSFIGITPYYVFQCRPTLGNRDFVVPVEDGYFILEQAKMNCSGLAKRF 306 >gi|118602356|ref|YP_903571.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567295|gb|ABL02100.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 315 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 99/282 (35%), Positives = 151/282 (53%), Gaps = 17/282 (6%) Query: 43 IANLINPHNPNDPIARQFIPQK-----EELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 A LI+ N NDP+ RQ I K E ++LP E E +SP+ G++H+YP+R+ Sbjct: 42 FAQLIDKSNKNDPLLRQVISSKVLSKSENFSLLPLEEE------KYSPVAGLIHKYPNRV 95 Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 LL VC ++C++CFR+ S+ + + + + YI +I EVI +GGD L L Sbjct: 96 LLITSQVCAIHCQYCFRQNFNYSEHDAISNWNEVQN---YIVNDVKINEVILSGGDLLSL 152 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 S +L ++ + I H++ LR H+R +V P RI +L L ++ V I +H NH Sbjct: 153 SDDKLSILIDNIANIAHIKTLRIHTRSIVVMPSRITDKLADTLNQSRLNVVIVLHTNHAQ 212 Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277 E S + I++L +G+ LL+QSVLLKG+ND +IL L +L I PYYLH D Sbjct: 213 ELSVKFAQKITKL--SGVTLLNQSVLLKGVNDSIKILTELCLKLFDLGILPYYLHMLDKV 270 Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 G F + ++ ++ LK +SG P + D G + K Sbjct: 271 QGAQDFLVKDDDAIQLHQQLKNNLSGYLVPKLVRD-NGNHSK 311 >gi|254516177|ref|ZP_05128237.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium NOR5-3] gi|219675899|gb|EED32265.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium NOR5-3] Length = 345 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 90/283 (31%), Positives = 150/283 (53%), Gaps = 3/283 (1%) Query: 42 VIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLK 100 A I N DP+ RQ + ++E I+ +DP+ + + ++ G++ +Y R LL Sbjct: 58 AFAARIERGNVADPLLRQILAAQDETRIVTGYSKDPLAETSLYAGTPGLLQKYTGRALLV 117 Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 + C + CR+CFRR+ + SS + A + + + I E+I +GGDPL+L + Sbjct: 118 VTGQCAINCRYCFRRDYPYADNAQ--SSAERLATIDRLLDDPSIGEIILSGGDPLLLPDE 175 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220 ++ + + + + LR H+R+P+V P+R+ LIQ L E G P + +H+NHP E Sbjct: 176 QIAAMARRIARHQRSVTLRIHTRLPMVIPERVTDSLIQALSERGLPSVMVLHSNHPNEID 235 Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280 AI L AG +L+QSVLL G+ND PE+LA+L PYY+H D AG Sbjct: 236 APTAHAIKSLREAGTTVLNQSVLLAGVNDKPEVLAHLSDRLFAAGALPYYIHMLDKVAGA 295 Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +HF ++ + ++I+ L G P +++ PG K +++ Sbjct: 296 AHFEVSEDSARRIMGELSGMRPGYLVPRLVIERPGAGSKQQLE 338 >gi|325926499|ref|ZP_08187819.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118] gi|325543148|gb|EGD14591.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118] Length = 342 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 93/267 (34%), Positives = 140/267 (52%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C Sbjct: 75 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYC 134 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR +++ + A+ I I EV+ +GGDPL L+ +L ++ L I Sbjct: 135 FRRHFPYAEETA--ARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAI 192 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+PIV P+R++ L L+ PV +HANH EF AA+ L + Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRD 252 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 G LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF + + Sbjct: 253 TGAHLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + A L ++SG P + ++PG GK Sbjct: 313 LHAELAARLSGYLVPRLVREIPGDTGK 339 >gi|78048134|ref|YP_364309.1| putative radical SAM superfamily protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036564|emb|CAJ24255.1| putative radical SAM superfamily protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 342 Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 93/267 (34%), Positives = 140/267 (52%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C Sbjct: 75 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYC 134 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR +++ + A+ I I EV+ +GGDPL L+ +L ++ L I Sbjct: 135 FRRHFPYAEETA--ARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAI 192 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+PIV P+R++ L L+ PV +HANH EF AA+ L + Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRD 252 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 G LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF + + Sbjct: 253 TGAHLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + A L ++SG P + ++PG GK Sbjct: 313 LHAELAARLSGYLVPRLVREIPGDTGK 339 >gi|21243115|ref|NP_642697.1| hypothetical protein XAC2381 [Xanthomonas axonopodis pv. citri str. 306] gi|21108633|gb|AAM37233.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 342 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 92/267 (34%), Positives = 137/267 (51%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E+ P D +GD G++ +Y R LL C +CR+C Sbjct: 75 HDPLLRQVLPLDAEMQPAPGFGLDAVGDGAARTAAGVIQKYRGRALLIATGSCAAHCRYC 134 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR +++ + A+A I I EV+ +GGDPL L+ +L ++ L + Sbjct: 135 FRRHFPYAEETA--ARDGWRDAVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAV 192 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+PIV P+R++ L L+ PV +HANH EF AA L Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLRE 252 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 G LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF + + Sbjct: 253 TGAQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + A L ++SG P + ++PG GK Sbjct: 313 LHAELAARLSGYLVPRLVREIPGDTGK 339 >gi|152979756|ref|YP_001345385.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus succinogenes 130Z] gi|150841479|gb|ABR75450.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus succinogenes 130Z] Length = 340 Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust. Identities = 95/257 (36%), Positives = 136/257 (52%), Gaps = 3/257 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ Q + +E +DP+ + P I+H+Y +R+L + + C V CR Sbjct: 70 NPQDPLLLQVMLSHQEFLYAEGFNKDPL-EEQKMPAPNILHKYHNRLLFMVKNACAVNCR 128 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR +Q + + A+ YI E QI EVIF+GGDPL+ L ++K L Sbjct: 129 YCFRRHFPYNQSQG--NKANWRQAIEYIAENPQIEEVIFSGGDPLMAKDHELDWLIKQLE 186 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H+Q LR HSR+P++ PQRI L + L+ + + H NHP E + A+ RL Sbjct: 187 TIPHLQRLRIHSRLPVMIPQRITSALCRMLQNSRLKAVLVTHINHPNEIDDVLAQAMVRL 246 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 A + LL+QSVLLK +ND+ +L L E+ I PYYLH D G +HF ++ E Sbjct: 247 KQARVELLNQSVLLKNVNDNAAVLKTLSDNLFEIGILPYYLHLLDKVEGAAHFYVSDESA 306 Query: 291 QKIVASLKEKISGLCQP 307 KI L+ SG P Sbjct: 307 VKIYRDLQATTSGYLVP 323 >gi|260774695|ref|ZP_05883599.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450] gi|260609351|gb|EEX35502.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450] Length = 340 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 89/276 (32%), Positives = 150/276 (54%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P EE ++ DP+ D + + G++H+Y +R L+ + C + CR Sbjct: 67 NPFDPLLRQVLPLSEEFDVHSGYSTDPL-DEQDNQVPGLLHKYRNRALMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + +L Y+++ ++ E+I +GGDPL+ + LQ ++ + Sbjct: 126 YCFRRHFPYNENKG---NKSVWSQSLDYVRQHPELNEIILSGGDPLMAKDEELQWLIGQI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I+H++ LR HSR+P+V P RI + L V + H NH E ++E A+S Sbjct: 183 ADIQHIKRLRIHSRLPVVIPARITTTFTKLLAGTRLQVILVTHINHANEINQELRDALSS 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+Q V+LKG+ND E L + + + PYY+H D G +HF ++ ++ Sbjct: 243 LRREGVTLLNQGVMLKGVNDSVEAQVALSESLFDAGVLPYYIHVLDKVQGAAHFFISDQQ 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+A + E++SG P ++ G K +D H Sbjct: 303 AKQIMAGVIERVSGYLVPKLTREIGGRASKTPLDLH 338 >gi|90413354|ref|ZP_01221347.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK] gi|90325596|gb|EAS42065.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK] Length = 340 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 91/276 (32%), Positives = 145/276 (52%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P + E + DP+ + +++ + G++H+Y +R L+ + C V CR Sbjct: 67 NPYDPLLRQILPLEPEFEVHDGYSLDPLEEQDNA-IPGLLHKYKNRALMIVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + AL YI E ++ EVI +GGDPL+ L ++ + Sbjct: 126 YCFRRHFPYNDNKG---GKAQWKVALTYIAEHPELNEVILSGGDPLMAKDHELAWLVDEI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR H+R+P+V P RI EL + + + H NH E ++E A+++ Sbjct: 183 ESISHIKRLRIHTRLPVVIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L LL+Q VLL+GIND + L +L I+PYYLH D G +HF + E Sbjct: 243 LKRVNATLLNQGVLLRGINDSVDALTSLSEALFTAGIQPYYLHVLDKVQGATHFMVDDTE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++++A L + +SG P ++ G K +D H Sbjct: 303 ARQLMAGLMQNVSGYMVPKLTREIGGRASKTPLDLH 338 >gi|238502959|ref|XP_002382713.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357] gi|220691523|gb|EED47871.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357] Length = 593 Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 99/292 (33%), Positives = 155/292 (53%), Gaps = 9/292 (3%) Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELN-ILPEEREDPIGDNNHSPLKGIVHRY 93 ++ LTP I +LIN +DPI RQFIP P+ + D + + + SP+KG+VHRY Sbjct: 216 AVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRY 275 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS------SKDTEAALAYIQEKSQIWEV 147 PD++L VCPVYCRFC R VG Q TV K E YI ++ +V Sbjct: 276 PDKVLFLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDV 335 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + +GGD L +L+++ TL I H++ +RF S+ V P RI + ++ GK + Sbjct: 336 VVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRK-GKNI 394 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 + H NHP E S A +L + + + +Q+VLL +N++ + L+R + I+ Sbjct: 395 ALHTHFNHPQEISWITEHAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKRLIRKLADNNIQ 454 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 PYY++ D+ G R + + I + ++ I+G P +++DLPGG GK Sbjct: 455 PYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGGGGK 506 >gi|153834930|ref|ZP_01987597.1| lysine 2;3-aminomutase [Vibrio harveyi HY01] gi|148868610|gb|EDL67696.1| lysine 2;3-aminomutase [Vibrio harveyi HY01] Length = 340 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 91/275 (33%), Positives = 149/275 (54%), Gaps = 3/275 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P EE + DP+ + ++ L G++H+Y +R L+ + C V CR Sbjct: 67 NPYDPLLRQVLPLSEEFEVHEGYSNDPLEEQDNE-LPGLLHKYRNRALMIVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + Sbjct: 126 YCFRRHFPYQENKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+P+V P RI EL Q L+ + + + H NH E + E A +++L Sbjct: 184 QIPHIKRLRIHSRLPVVIPARITDELCQLLRASRLQIVLVTHINHANEINAEFAAQMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+Q+VLLK +N+ E L + I PYYLH D G +H+ ++ EE Sbjct: 244 KQAGVTLLNQAVLLKNVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + I+ + ++SG P ++ G K +D H Sbjct: 304 KAIMRGVITQVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|54310450|ref|YP_131470.1| hypothetical protein PBPRA3383 [Photobacterium profundum SS9] gi|46914891|emb|CAG21668.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 357 Score = 166 bits (421), Expect = 3e-39, Method: Compositional matrix adjust. Identities = 92/276 (33%), Positives = 145/276 (52%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P + E + DP+ + +++ + G++H+Y +R L+ + C V CR Sbjct: 84 NPYDPLLRQVLPLEPEFEVHDGYSLDPLKEQDNA-IPGLLHKYKNRALMIVKGGCAVNCR 142 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + AL YI E ++ EVI +GGDPL+ L ++ + Sbjct: 143 YCFRRHFPYSDNKG---GKTQWKKALNYIAEHPELNEVILSGGDPLMAKDHELAWLVDEI 199 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H++ LR H+R+P+V P RI EL + + + H NH E ++E A+++ Sbjct: 200 ESIPHIKRLRIHTRLPVVIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTK 259 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + LL+Q VLL+GIND E L L + I+PYYLH D G +HF + E Sbjct: 260 LKRVNVTLLNQGVLLRGINDSVEALTALSESLFTAGIQPYYLHVLDKVQGAAHFMIDDTE 319 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + ++A L + +SG P ++ G K +D H Sbjct: 320 ARHLMAGLMQNVSGYMVPKLTREIGGRTSKTPLDLH 355 >gi|94676743|ref|YP_589018.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219893|gb|ABF14052.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 339 Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust. Identities = 93/270 (34%), Positives = 145/270 (53%), Gaps = 2/270 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P DP+ RQ + EE + +DPI + ++ ++H+Y +R +L + C + CR Sbjct: 67 DPTDPLLRQVLTLPEEFKQHLDFSKDPINEQQYNVAPMLLHKYYNRAILLVKSGCAINCR 126 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + + A+ YI++ S++ E+I +GGDPL+ L K+L L Sbjct: 127 YCFRRYFPYQDNQS--NQANWKLAIEYIKQHSELNEIILSGGDPLMAKDHELDKLLNLLE 184 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H+ LR HSR+ IV P RI + Q L + V + H NH E +I++L Sbjct: 185 DIPHLTKLRIHSRLLIVIPARITSFICQRLARSRLKVVLVTHINHAQEIDSSVQKSIAKL 244 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 N + LL+QSVLL+GIND+ +ILA L T + I PYYLH D G +HF + + Sbjct: 245 RNKQVTLLNQSVLLRGINDNAQILATLSETLFSIGILPYYLHTLDCVQGATHFIVDDQRA 304 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320 +KI+ L K++G P + D+ G K Sbjct: 305 RKIMHDLLSKVAGYLVPRLVRDISGMPSKT 334 >gi|262376096|ref|ZP_06069327.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145] gi|262309190|gb|EEY90322.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145] Length = 340 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 89/272 (32%), Positives = 145/272 (53%), Gaps = 2/272 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ Q +P EL P DP+G+ + G++H+Y R LL L C V+CR Sbjct: 63 NPLDPLLLQVLPHHLELEEHPGFVTDPLGEEQANQQPGVLHKYKSRFLLTLTGACAVHCR 122 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + ++D Y++ + I EVI +GGDPL LS+++L+ ++ L Sbjct: 123 YCFRRHF--PYQENLPKNEDWINIKQYLESQPDINEVILSGGDPLTLSNRKLKTWIERLE 180 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 + H++ LR HSRVPIV P R++ EL+ LK + + + +H+NH E + +++L Sbjct: 181 SVPHLKFLRIHSRVPIVIPNRVDEELLSMLKNSRLRIILVVHSNHASELDDFTCKRLNQL 240 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 I +L+Q+VLL G+ND ++L +L + + PYYLH D G HF L + Sbjct: 241 VQQQITVLNQAVLLNGVNDSAQVLVDLSYRLFDAGVMPYYLHVLDKVKGAHHFDLAPDHI 300 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 +I + + G P + ++ G K + Sbjct: 301 NEIYTEVLANLPGYLVPKLVREIAGEKNKTPL 332 >gi|303328383|ref|ZP_07358821.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3] gi|302861713|gb|EFL84649.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3] Length = 378 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 104/343 (30%), Positives = 184/343 (53%), Gaps = 16/343 (4%) Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 ++ +T+A+ L ++E +++++ IS + ++ P +LI+P +P+DPI + +P Sbjct: 3 NENMTTAEQLQKHIFFREEHLEQLQRISKRFPFSIPPYYLSLIDPSDPHDPIRKMCVPAL 62 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 +EL+ P R D G+ +++ L G+ H+Y L+ + C +YCR CFR+ +VG + Sbjct: 63 DELD--PGGRLDTSGEASNTVLTGLQHKYRQTALVLSTNACAMYCRHCFRKRLVGLEGRE 120 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 +D LAYI++ +I V+ +GGD L+ L + L+ L ++H+ ++R SR Sbjct: 121 TRPRRDK--VLAYIRKHHEISNVLLSGGDALLNPTPVLHEYLEELSGMEHLDVVRICSRT 178 Query: 185 PIVDPQRI--NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 P+V P RI + +L+ KE G K + + NHP E S +A A+ L G+++ +Q Sbjct: 179 PVVLPMRIYMDQKLLDLFKEYGAQKHLCLVTQFNHPRELSPQAQRALDALQECGVMVRNQ 238 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKE 299 +VLL G+ND L L++ V + PYY+ G ++F++ I + IV K+ Sbjct: 239 TVLLHGVNDHGPTLGKLLKELVRRGVVPYYVFQCRPVTGVKNNFQVPIAQAYAIVEEAKQ 298 Query: 300 KISGLCQPF-YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 +GL + F Y+L GK++I + VGNG + H Sbjct: 299 MQNGLGKAFRYVLSHE--TGKIEI----LGPVGNGRWLFKYHQ 335 >gi|15601964|ref|NP_245036.1| hypothetical protein PM0099 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720310|gb|AAK02183.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 337 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 96/258 (37%), Positives = 137/258 (53%), Gaps = 5/258 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ Q + ++E + +DP+ + + + + ++H+Y +R+LL + C V CR Sbjct: 67 NPQDPLFLQVMSFRDEFLQVEGFSKDPLEEQD-AVVPSVLHKYHNRLLLMVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + + AL YI +I EVIF+GGDPL+ L ++K L Sbjct: 126 YCFRRHFPYADNKG---NKANWQKALDYIANHPEIEEVIFSGGDPLMAKDHELDWLIKNL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H+Q LR H+R+P+V PQRI + Q L E+ + H NHP E AI++ Sbjct: 183 ENIPHLQRLRIHTRLPVVIPQRITADFCQTLAESRFQTVLVTHINHPNEIDAFFAQAINK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G++LL+Q+VLLKGIND+ IL L I PYYLH D G SHF L Sbjct: 243 LREVGVLLLNQAVLLKGINDNAHILKQLGDKLFATNILPYYLHLLDKVEGASHFYLDDSR 302 Query: 290 GQKIVASLKEKISGLCQP 307 I L+ SG P Sbjct: 303 ALNIYKELQSLTSGYLVP 320 >gi|148976876|ref|ZP_01813531.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3] gi|145963750|gb|EDK29010.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3] Length = 340 Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust. Identities = 93/276 (33%), Positives = 147/276 (53%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ +P EE + DP+ + +++ + G++H+Y +R L+ + C V CR Sbjct: 67 NPHDPLLRQVLPLSEEFEVHEGYSADPLEEQDNA-IPGLLHKYKNRALMIVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L Y+ + S+I EVI +GGDPL+ ++ ++ + Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQTSLDYVAQHSEINEVILSGGDPLMAKDSEIEWLIHAI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I HV+ +R HSR+P+V P RI EL Q L + V + H NH E + E A+ + Sbjct: 183 EQIPHVETVRIHSRLPVVIPARITDELCQTLSKTRLNVVMVSHINHANEINVELKQALLK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L +G LL+Q V+LKG+N+ L L + I PYY+H D G +HF ++ EE Sbjct: 243 LKFSGATLLNQGVMLKGVNNSANSLKELSEKLFDAGILPYYMHVLDKVQGAAHFYISDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + L ++SG P ++ G K +D H Sbjct: 303 AKHHFKGLISEVSGYLVPKLTREIGGRSSKTPLDLH 338 >gi|261492016|ref|ZP_05988591.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494571|ref|ZP_05991053.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309762|gb|EEY10983.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312299|gb|EEY13427.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 330 Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 98/277 (35%), Positives = 145/277 (52%), Gaps = 11/277 (3%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + + A + NPNDP+ Q + + E DP+ + SP I+H+Y Sbjct: 45 FALRVPRMFAEKMEKGNPNDPLFLQAMSLQAEFIEAEGFVVDPL-EEQQSPAPNILHKYH 103 Query: 95 DRILLKLLHVCPVYCRFCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 +R+L L + C + CR+CFRR E V S K + L YI E ++ EVI + Sbjct: 104 NRLLFMLKNSCAINCRYCFRRHFPYEEVKSGKAV------WQQGLTYIAEHPELEEVILS 157 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + L +L L I H++ LR HSR+P+V P RI EL + L ++ V + Sbjct: 158 GGDPLMAKDQDLDWILTQLEQISHIKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLV 217 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 H NH E +++L AG++LL+QSV+LKG+ND+ + L L E I PYY Sbjct: 218 THINHANEIDAVFANKMAQLKKAGVVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPYY 277 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 LH D AG SHF + E+ +I L+ SG P Sbjct: 278 LHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYLVP 314 >gi|188576188|ref|YP_001913117.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520640|gb|ACD58585.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 313 Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 91/267 (34%), Positives = 138/267 (51%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C Sbjct: 46 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 105 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR +++ + A+A I I EV+ +GGDPL L+ +L ++ L I Sbjct: 106 FRRHFPYAEETA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAI 163 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+PIV P+R++ L+ L+ P +HANH EF A+ L + Sbjct: 164 PHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRD 223 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 G LL+Q+VLL G+ND + LA L + PYYLH D AG +HF + + Sbjct: 224 TGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 283 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + L ++SG P + ++PG GK Sbjct: 284 LHTELATRLSGYLVPRLVREIPGDTGK 310 >gi|254362093|ref|ZP_04978215.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213] gi|153093652|gb|EDN74611.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213] Length = 330 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 98/277 (35%), Positives = 145/277 (52%), Gaps = 11/277 (3%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + + A + NPNDP+ Q + + E DP+ + SP I+H+Y Sbjct: 45 FALRVPRMFAEKMEKGNPNDPLFLQAMSLQAEFIEAEGFVVDPL-EEQQSPAPNILHKYH 103 Query: 95 DRILLKLLHVCPVYCRFCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 +R+L L + C + CR+CFRR E V S K + L YI E ++ EVI + Sbjct: 104 NRLLFMLKNSCAINCRYCFRRHFPYEEVKSGKAV------WQQGLTYIAEHPELEEVILS 157 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + L +L L I H++ LR HSR+P+V P RI EL + L ++ V + Sbjct: 158 GGDPLMAKDQDLDWILTQLEQISHIKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLV 217 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 H NH E +++L AG++LL+QSV+LKG+ND+ + L L E I PYY Sbjct: 218 THINHANEIDAVFANKMAQLKKAGVVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPYY 277 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 LH D AG SHF + E+ +I L+ SG P Sbjct: 278 LHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYLVP 314 >gi|253576596|ref|ZP_04853924.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844010|gb|EES72030.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14] Length = 389 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 97/315 (30%), Positives = 168/315 (53%), Gaps = 10/315 (3%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72 D+ + + +++ E+K I++ + + NLI+ ++P DPI + IP EL Sbjct: 9 DIAKVSQLSEQERQELKPITDKFVFRVNDYYLNLIDWNDPEDPIRKLVIPNTGELK--EY 66 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 R D + + + G H+Y LL + VC YCR+CFR+ + + ++ D Sbjct: 67 GRWDASDEAANYVVPGCQHKYRTTALLIVSEVCGSYCRYCFRKRLFRNDVKEAMA--DVT 124 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 + YI + +I ++ TGGD LIL+ K+L+ +L+ LR I+HV+I+R S++P+ +P RI Sbjct: 125 PGIEYIAQHPEINNILLTGGDSLILATKKLRSILERLRAIEHVKIIRLGSKIPVFNPMRI 184 Query: 193 --NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 +PEL+ ++E + +Y+ H NHP E + EA L +AG I+++Q+ +LKGI Sbjct: 185 YEDPELLDLIREFSTVDQRIYVMAHINHPREITPEAKRGFQALHDAGAIVVNQTPILKGI 244 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 NDD +L L+ + PYY AG + F + ++ ++V K + SGL + Sbjct: 245 NDDAAVLGELLDRLSWAGVTPYYFFINRPVAGNADFVIPLKRAYQLVEEAKARTSGLGKR 304 Query: 308 FYILDLPGGYGKVKI 322 L + GK++I Sbjct: 305 VR-LSMSHSSGKIEI 318 >gi|261345001|ref|ZP_05972645.1| KamA family protein [Providencia rustigianii DSM 4541] gi|282567147|gb|EFB72682.1| KamA family protein [Providencia rustigianii DSM 4541] Length = 342 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 150/274 (54%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P+DP+ Q + K E +I P DP+ + ++ + ++H+Y +R L+ + C V CR Sbjct: 67 DPSDPLLLQVLTAKTEFDIHPGFSTDPLEEQDNE-IPSLLHKYHNRALMLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + A+ YI+ S++ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYEDNKG---NKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H+ LR HSR+P+V P+RI L + L+++ V + H NH E + A+ + Sbjct: 183 EDIPHITRLRIHSRLPVVIPERITNTLCKRLEQSRLHVIMVTHVNHANEIDDSFTHAMQK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+ +ND+ LANL E I PYYLH D G +HF ++ E Sbjct: 243 LKRAGVTLLNQSVLLRQVNDNVTALANLSNALFEAGILPYYLHVLDKVQGAAHFLVSDNE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++++ L K+SG P ++ G K +D Sbjct: 303 ARELIRELLSKVSGYLVPKLAREIGGEPSKTLLD 336 >gi|290476545|ref|YP_003469450.1| putative aminomutase [Xenorhabdus bovienii SS-2004] gi|289175883|emb|CBJ82686.1| putative aminomutase [Xenorhabdus bovienii SS-2004] Length = 343 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 97/300 (32%), Positives = 154/300 (51%), Gaps = 5/300 (1%) Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84 + E E + + + A + +P+DP+ Q + +EE P DP+ + HS Sbjct: 41 LKEGNEAKRLFPLRVPRAFAARMKKGDPHDPLLLQVLTAQEEFETHPGFSTDPL-EEQHS 99 Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQ 143 + G++H+Y +R LL + C V CR+CFRR KG + + + AL YI++ + Sbjct: 100 AVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYEDNKG---NKNNWQLALDYIEQHPE 156 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 + E+IF+GGDPL+ L ++ L I H++ LR H+R+P+V P RI L +++ Sbjct: 157 LDEIIFSGGDPLMAKDHELDWLMTRLESISHIKRLRIHTRLPVVIPDRITLSLCNRFEKS 216 Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 + + H NH E + L AG+ LL+QSVLL+ +ND + LA+L T + Sbjct: 217 QLQIIMVTHINHANEIDNTFRDKMMWLKQAGVTLLNQSVLLRNVNDSADTLADLSNTLFD 276 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 I PYY+H D G +HF + EE + I+ L KISG P ++ G K +D Sbjct: 277 AGILPYYIHILDKVQGAAHFLVGDEEAKAIMRELLTKISGYLVPCLAREIGGEPSKTPLD 336 >gi|320591241|gb|EFX03680.1| L-lysine-aminomutase [Grosmannia clavigera kw1407] Length = 487 Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust. Identities = 101/314 (32%), Positives = 164/314 (52%), Gaps = 22/314 (7%) Query: 26 DEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDN 81 D + ++ + A P + + IN +P NDPI RQF+P K + +P+ + D + ++ Sbjct: 124 DLVADVMDGIKAATMPYVLSRINWKDPRNDPIFRQFLPVKSRM--IPDHPKLTLDSLHES 181 Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDT----EAAL 135 SP+ G+V+RYP++ L VCP YC FC R VG +V S K T E Sbjct: 182 ADSPVSGLVYRYPEKALFLPTSVCPTYCMFCTRSYAVGGNTESVKKASMKPTKRRWEEVF 241 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--- 192 AYI+ + + +++ +GGD L+ +L V + L + +++ RF S+ V P RI Sbjct: 242 AYIESQPALQDIVVSGGDAYYLTPDQLAYVGERLIAMPNIRRFRFASKGVAVAPARILDA 301 Query: 193 NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 L ++AGK + + H NHP E S A +L+ AGI++ +Q+VLL+ Sbjct: 302 EDSWFDALSYVATQARKAGKAMALHTHFNHPNEISWVTEQAARKLSEAGIMVRNQTVLLR 361 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDD ++ L+R + I PYY++ D+ H R ++ I A ++ I+G Sbjct: 362 GVNDDVATMSTLIRKLADNIIFPYYVYQCDMVEKVEHLRTPLQTILDIEAQIRGSIAGFM 421 Query: 306 QPFYILDLPGGYGK 319 P +++DLPGG GK Sbjct: 422 MPQFVVDLPGGGGK 435 >gi|84624209|ref|YP_451581.1| hypothetical protein XOO_2552 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84368149|dbj|BAE69307.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 342 Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust. Identities = 91/267 (34%), Positives = 138/267 (51%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C Sbjct: 75 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 134 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR +++ + A+A I I EV+ +GGDPL L+ +L ++ L I Sbjct: 135 FRRHFPYAEETA--ARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAI 192 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+PIV P+R++ L+ L+ P +HANH EF A+ L + Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRD 252 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 G LL+Q+VLL G+ND + LA L + PYYLH D AG +HF + + Sbjct: 253 TGAQLLNQAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARA 312 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + L ++SG P + ++PG GK Sbjct: 313 LHTELATRLSGYLVPRLVREIPGDTGK 339 >gi|145634674|ref|ZP_01790383.1| DNA repair protein RecO [Haemophilus influenzae PittAA] gi|145268219|gb|EDK08214.1| DNA repair protein RecO [Haemophilus influenzae PittAA] Length = 338 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 99/274 (36%), Positives = 139/274 (50%), Gaps = 2/274 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V CR+CFRR + + K + AL YI S+I EVIF+GGDPL+ L ++ Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLI 180 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 K L I H+Q LR H+R+P+V PQRI E L E+ + H NHP E + A Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANA 240 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++ Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 E +I +L+ SG P ++ G K Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334 >gi|145632578|ref|ZP_01788312.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655] gi|144986773|gb|EDJ93325.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655] Length = 338 Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 137/269 (50%), Gaps = 2/269 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V CR+CFRR + + K + AL YI S+I EVIF+GGDPL+ L ++ Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLI 180 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETPLQKVMVTHINHPNEIDQVFTNA 240 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++ Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315 E +I +L+ SG P ++ G Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 329 >gi|145640274|ref|ZP_01795858.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021] gi|145274860|gb|EDK14722.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.4-21] Length = 338 Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust. Identities = 99/274 (36%), Positives = 139/274 (50%), Gaps = 2/274 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCA 122 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V CR+CFRR + + K + AL YI S+I EVIF+GGDPL+ L ++ Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAFLI 180 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 K L I H+Q LR H+R+P+V PQRI E L E+ + H NHP E + A Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANA 240 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++ Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 E +I +L+ SG P ++ G K Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334 >gi|149916871|ref|ZP_01905372.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1] gi|149822149|gb|EDM81540.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1] Length = 471 Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 98/303 (32%), Positives = 163/303 (53%), Gaps = 21/303 (6%) Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91 ++ ++P + LI+ P DPI RQFIP EL LP+ + D + + +P+ G+ H Sbjct: 103 AVRVSPYMIALIDWSKPYADPIRRQFIPTGSEL--LPDHPKLDLDSLHEQADAPVPGLTH 160 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG--SQKGTVLSSKDT----EAALAYIQEKSQIW 145 RYPD+ L L CPVYCRFC R VG +++ +S K T EAA YI + ++ Sbjct: 161 RYPDKALFLALDTCPVYCRFCTRSYAVGLDTEEVEKVSLKPTNDRWEAAFEYIASRPELE 220 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-----IQCL 200 +++ +GGD L ++ + + L + +++ +RF ++ P V PQ+I + + + Sbjct: 221 DIVISGGDSYNLRADHIKTIGERLLAMPNIRRMRFATKGPAVMPQKILTDTAWVDALTSI 280 Query: 201 KEAG----KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 E G K V I H NHP E ++ + A++ L GI + +QSVL +G+ND PE + Sbjct: 281 HEQGRKLHKEVCIHTHFNHPNEITQISQRAMNLLFERGITVRNQSVLQRGVNDTPEAMGQ 340 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L++ + + PYY++ DL G + R T++ I ++ +G P +++D PGG Sbjct: 341 LVKRLAHVNVHPYYVYVHDLVRGVENLRTTVQTATAIEKEIRGMTAGFNTPVFVVDAPGG 400 Query: 317 YGK 319 GK Sbjct: 401 GGK 403 >gi|262368517|ref|ZP_06061846.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046] gi|262316195|gb|EEY97233.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046] Length = 338 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 93/291 (31%), Positives = 148/291 (50%), Gaps = 2/291 (0%) Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91 S + + + + NP DP+ Q +P EL P+ DP+G+ + G++H Sbjct: 44 STQFKLRVPRAFVTRMQKGNPLDPLLLQVLPHHLELEEHPDFVTDPLGEEQANQQPGVLH 103 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 +Y R LL L C V+CR+CFRR + + S+D YIQ + I EVI +G Sbjct: 104 KYKTRFLLTLTGACAVHCRYCFRRHF--PYQENLPKSEDWINIQHYIQSQPDINEVILSG 161 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 GDPL LS+++++ ++ L I ++ LR HSRVPIV P R++ ELI LK + + + + Sbjct: 162 GDPLTLSNRKIKLWIERLESIPQLKFLRIHSRVPIVMPNRVDDELISILKNSRLRIILVV 221 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271 H+NH E + + + I + +Q+VLLKG+ND +IL +L + + PYYL Sbjct: 222 HSNHASELDDFTCRQLQQFVAEKITVFNQAVLLKGVNDHVQILTDLSYRLFDAGVLPYYL 281 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 H D G HF L ++ + L + G P + ++ G K + Sbjct: 282 HVLDKVKGAHHFDLNPQDIDFLYQGLLANLPGYLVPKLVREIAGEKNKTPL 332 >gi|312213471|emb|CBX93553.1| hypothetical protein [Leptosphaeria maculans] Length = 595 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 22/310 (7%) Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEE---REDPIGDNNHSPLKGIVH 91 +I LTP I + ++ +NP +DPI RQF+P K ++P+ + D + + SP+ G+VH Sbjct: 138 AIRLTPHILSRVDWNNPLDDPIRRQFLPLKS--GMIPDHEHMKLDSLNEEADSPVPGLVH 195 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EAALAYIQEKSQIW 145 RYP R L +CPVYCRFC R VG TV E YI++ + Sbjct: 196 RYPGRALFLATSICPVYCRFCTRSYAVGGNTDTVAKRAQKPNRARWEVIFKYIEDNDSLQ 255 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL-- 200 +++ +GGD L L+++++ L I H+ +R ++ V P R N + L Sbjct: 256 DIVLSGGDIFYLEPHLLREIVERLLSIPHIFRIRLATKGLSVAPGRFLDTNDGWMDTLMD 315 Query: 201 -----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 ++ GK V + H NH E + A RL G+I+ +Q+VLL G+N++P+ + Sbjct: 316 ISNQGRKLGKQVCLHTHINHASEITWVTRMAARRLFAHGVIVRNQTVLLNGVNNNPDAIK 375 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 L+ T + I+PYY++ D+ G R + E ++ ++ +SG P +++DLPG Sbjct: 376 ELITTLANINIQPYYVYQCDMVQGIEDLRTPLSEILRLDKLMRGTLSGFMMPAFVIDLPG 435 Query: 316 GYGKVKIDTH 325 G GK + T+ Sbjct: 436 GGGKRLVSTY 445 >gi|270264931|ref|ZP_06193195.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13] gi|270041229|gb|EFA14329.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13] Length = 333 Score = 165 bits (417), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 96/297 (32%), Positives = 159/297 (53%), Gaps = 10/297 (3%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE-DPIGDNNHSPLKG 88 E +S LTP + L + +F P+ E LP + D + + +P+ G Sbjct: 13 EEETRFSEKLTPYLKELSKTSQAIKDMY-EFNPEYE---TLPANLDVDLLNEKTSTPVFG 68 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIW 145 V +Y ++L+ L + C CR+C R++ VG +G + S+ + + YI I+ Sbjct: 69 TVKKYDGQLLVLLSYTCAANCRYCERQDRVGVGLDVEGRLKMSQ-IDDIVDYIANDKSIY 127 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 EVI +GGDPL + K LQ + L+ I HV+++R H+R P+ +P ++ EL++ L +A Sbjct: 128 EVIASGGDPLT-NPKGLQYLFNRLKAIDHVKVVRIHTRYPLQNPGKVRMELMEELAQAKP 186 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 VY+++H +HP E E I I G +LL+Q+V LK INDD + L L EL Sbjct: 187 TVYLSLHIDHPDELQPEVIEMIRAFKKMGYVLLTQTVFLKTINDDKDTLKTLFLRLFELG 246 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 ++PYY++H T F + +E+ I+ L+ ++SGL P +++D+P GKV + Sbjct: 247 VRPYYIYHGQEVTSTRRFVMRLEDEMAIMTQLRNELSGLAFPQHVIDIPSASGKVVV 303 >gi|16272281|ref|NP_438493.1| hypothetical protein HI0329 [Haemophilus influenzae Rd KW20] gi|68248934|ref|YP_248046.1| lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP] gi|260581205|ref|ZP_05849024.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW] gi|260582577|ref|ZP_05850367.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127] gi|319775807|ref|YP_004138295.1| lysine 2,3-aminomutase [Haemophilus influenzae F3047] gi|1176350|sp|P44641|Y329_HAEIN RecName: Full=Uncharacterized KamA family protein HI_0329 gi|1573296|gb|AAC21990.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|68057133|gb|AAX87386.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP] gi|260092130|gb|EEW76074.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW] gi|260094388|gb|EEW78286.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127] gi|317450398|emb|CBY86614.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3047] Length = 338 Score = 164 bits (416), Expect = 1e-38, Method: Compositional matrix adjust. Identities = 98/269 (36%), Positives = 137/269 (50%), Gaps = 2/269 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCA 122 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V CR+CFRR + + K + AL YI S+I EVIF+GGDPL+ L ++ Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLI 180 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 240 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++ Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315 E +I +L+ SG P ++ G Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 329 >gi|317121265|ref|YP_004101268.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885] gi|315591245|gb|ADU50541.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885] Length = 361 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 86/236 (36%), Positives = 132/236 (55%), Gaps = 5/236 (2%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 DP + ++ G H+Y LL + VC YCRFCFR+ + S D E L Sbjct: 68 DPSDEESNYVAPGCQHKYGPTALLLVSKVCGAYCRFCFRKRLFREDVEEHHVSMDVEPGL 127 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--N 193 YI +I V+ TGGDPL+LS +RL ++L LR I HV+++R +++P +P R+ N Sbjct: 128 RYIAAHPEITNVLLTGGDPLMLSPRRLDQILTRLRAIPHVKVIRIGTKIPAFEPMRVTDN 187 Query: 194 PELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 PEL++ L+ A ++ ++H NHP E +EEA+ I L G+ L++Q+ LL+ +NDD Sbjct: 188 PELLEVLRRHSRADARIHFSLHFNHPREMTEEALRCIIALQEVGVTLVNQTPLLRRVNDD 247 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 P +LA L+ I PYY+ AG + F + + EG +IV K ++SG + Sbjct: 248 PAVLAELLERLTWWGIAPYYIFQNRPVAGNADFVVPLREGYRIVEQAKARVSGYAK 303 >gi|269962491|ref|ZP_06176840.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832787|gb|EEZ86897.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 340 Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 90/275 (32%), Positives = 148/275 (53%), Gaps = 3/275 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P EE + DP+ + ++ L G++H+Y +R L+ + C V CR Sbjct: 67 NPYDPLLRQVLPLSEEFEVHEGYSNDPLEEQDNE-LPGLLHKYRNRALMIVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + Sbjct: 126 YCFRRHFPYQENKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+P+V P RI EL L+ + + + H NH E + E A +++L Sbjct: 184 KIPHIKRLRIHSRLPVVIPARITDELCHLLRASRLQIVLVTHINHANEINAEFAAQMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+Q VLLK +N+ E L + I PYYLH D G +H+ ++ EE Sbjct: 244 KQAGVTLLNQGVLLKDVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++I+ + ++SG P ++ G K +D H Sbjct: 304 KEIMRGVITRVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|332289569|ref|YP_004420421.1| conserved hypothetical protein, radical SAM superfamily [Gallibacterium anatis UMN179] gi|330432465|gb|AEC17524.1| conserved hypothetical protein, radical SAM superfamily [Gallibacterium anatis UMN179] Length = 332 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 102/277 (36%), Positives = 144/277 (51%), Gaps = 5/277 (1%) Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 N + N NDP+ Q + E P +DP+ + +++ + ++H+Y +R+LL + Sbjct: 57 NKMEKGNANDPLFLQVMTDAAEFLQTPGFVKDPLQEQDNA-IPNLLHKYHNRVLLMVKGG 115 Query: 105 CPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C V CR+CFRR + G S + T L YI + S+I EVIF+GGDPL+ + L Sbjct: 116 CAVNCRYCFRRHFPYEANPGNKASWRKT---LDYIAQHSEIEEVIFSGGDPLMAKDRELA 172 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223 +L+ L I H++ +R HSR+P+V PQRI PEL + L ++ + +H NH E E Sbjct: 173 WLLEQLNQIPHLKTVRIHSRLPVVIPQRITPELCRSLADSPLNKVLVLHINHANEIDELL 232 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283 + L AG+ LL+QSVLLKGINDD IL L I PYYLH D G SHF Sbjct: 233 SRQLQPLKQAGVTLLNQSVLLKGINDDAHILKALNDKLFATGILPYYLHLLDKVEGASHF 292 Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 + E I L SG P ++ G K Sbjct: 293 WIDDERALAIYRQLITLSSGYLVPKLAREIAGEKSKT 329 >gi|251791935|ref|YP_003006655.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700] gi|247533322|gb|ACS96568.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700] Length = 339 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 97/259 (37%), Positives = 137/259 (52%), Gaps = 5/259 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 NP DP+ Q + +E +DP+ + N+ + + I+H+Y +R+L + C V C Sbjct: 67 NPKDPLFLQVMSSADEFLQAEGFSKDPLEEQNDKNVVSNILHKYHNRLLFMVKGGCAVNC 126 Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 R+CFRR KGT ++ + AL YI + +I EVIF+GGDPL+ L ++K Sbjct: 127 RYCFRRHFPYEENKGT---KQNWQTALQYIAQHPEIEEVIFSGGDPLMAKDHELGWLIKH 183 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 L I H++ LR HSR+P+V PQRI L L E + H NH E E+ A+ Sbjct: 184 LENIPHLKRLRIHSRLPVVIPQRITDALCAMLAETRLQKILVTHVNHANEIDEDFSHAMD 243 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288 +L N G++LL+QSVLLK +NDD IL L + I PYYLH D G +HF L Sbjct: 244 KLKNCGVVLLNQSVLLKNVNDDAYILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDA 303 Query: 289 EGQKIVASLKEKISGLCQP 307 + I L+ SG P Sbjct: 304 QALSIYKQLQRITSGYLVP 322 >gi|212710982|ref|ZP_03319110.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM 30120] gi|212686150|gb|EEB45678.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM 30120] Length = 342 Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 93/274 (33%), Positives = 151/274 (55%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P DP+ Q + K E +I P DP+ + +++ + ++H+Y +R L+ + C V CR Sbjct: 67 DPLDPLLLQVLTAKAEFDIHPGFSTDPLEEQDNA-IPSLLHKYRNRALMLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + A+ YI+ S++ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYEDNKG---NKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H+ LR HSR+P+V P+RI L Q L ++ V + H NH E +E A+ + Sbjct: 183 EEIPHITRLRIHSRLPVVIPERITDTLCQRLTQSRLHVIMVTHVNHANEIDDEFAQAMLK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L +G+ LL+QSVLL+ +ND+ LANL ++ I PYYLH D G +HF ++ E Sbjct: 243 LKRSGVTLLNQSVLLRQVNDNVTALANLSNALFDVGILPYYLHVLDKVQGAAHFLVSDLE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++++ L ++SG P ++ G K +D Sbjct: 303 ARQLIRELLSQVSGYLVPKLAREIGGEPSKTLLD 336 >gi|319896657|ref|YP_004134850.1| lysine 2,3-aminomutase [Haemophilus influenzae F3031] gi|317432159|emb|CBY80510.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3031] Length = 338 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 97/270 (35%), Positives = 136/270 (50%), Gaps = 2/270 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ Q + E DP+ + N + I+H+Y +R+L C V CR Sbjct: 67 NPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAAPNILHKYQNRLLFMTKGGCAVNCR 126 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + K + AL YI S+I EVIF+GGDPL+ L ++K L Sbjct: 127 YCFRRHFPYDENPG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLE 184 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H+Q LR H+R+P+V PQRI E L E + H NHP E + A+ +L Sbjct: 185 NIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNAMQKL 244 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + LL+QSVLL+G+NDD +IL L + I PYYLH D G SHF ++ E Sbjct: 245 NTVNVTLLNQSVLLRGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEA 304 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320 +I +L+ SG P ++ G K Sbjct: 305 MQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334 >gi|319790052|ref|YP_004151685.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio ammonificans HB-1] gi|317114554|gb|ADU97044.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio ammonificans HB-1] Length = 343 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 98/281 (34%), Positives = 161/281 (57%), Gaps = 7/281 (2%) Query: 56 IARQFIPQKEELNILPEERE----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111 + R +P EELN PE + DP+ + + HRYPDR+L+ + CPV CRF Sbjct: 49 VRRMLLPSLEELN--PELQNLGEPDPLREERDRKAPCLTHRYPDRVLVVTTNYCPVLCRF 106 Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 C R+ T+ S + +A L+Y++ Q+ +V+ +GG+PL+L + L+++L L+ Sbjct: 107 CMRKRNWRRPLFTI-SEDEVDAVLSYVRRNPQVRDVLISGGEPLLLPLELLERLLLGLKK 165 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231 I+ V+++R +R+P+V+P + + L E + V++ H NHP E + EA A+ L Sbjct: 166 IESVEVVRIGTRLPVVEPSAVLRSELLSLLERAQKVWVNTHFNHPDELTAEAAEAVKALL 225 Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291 G+ + +Q+VLLKG+ND +L L R ++++PYYL H D G HF I G Sbjct: 226 KCGVPVNNQTVLLKGVNDSVSVLERLFRGLQRIKVRPYYLFHCDPVEGVMHFSTPISLGL 285 Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332 K++ L+ ++S L P+Y +D PGGYGKV + +K+G+ Sbjct: 286 KLLEELQTRLSPLALPYYAVDGPGGYGKVPMLPVRFEKLGS 326 >gi|317046674|ref|YP_004114322.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b] gi|316948291|gb|ADU67766.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b] Length = 342 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 94/274 (34%), Positives = 146/274 (53%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + DP+ Q + ++E N P DP+ D S + G++H+Y +R LL + C V CR Sbjct: 67 DAQDPLLLQVLTSRQEFNDAPGYSTDPL-DEQSSVVPGLLHKYRNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + ++ +AA+ YI + ++ E+IF+GGDPL+ L +++ L Sbjct: 126 YCFRRHFPYQDNQG---NKRNWQAAIDYIADHPELDEIIFSGGDPLMAKDHELAWLIEAL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 + H++ LR HSR+P+V P RI L Q L V + H NH E +E + Sbjct: 183 EKLPHLKRLRIHSRLPVVIPARITEGLCQLLANTRLQVLLVSHINHAQEIDDELRYGMQM 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L AG+ LL+QSVLL+G+ND + LA+L + I PYYLH D G +HF + +E Sbjct: 243 LKRAGVTLLNQSVLLRGVNDKAQQLADLSNALFDAGILPYYLHVLDKVQGAAHFFVPDDE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + +V L +SG P ++ G K +D Sbjct: 303 ARALVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336 >gi|310765349|gb|ADP10299.1| conserved uncharacterized protein [Erwinia sp. Ejp617] Length = 342 Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 151/289 (52%), Gaps = 3/289 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A + +P DP+ Q I ++E P DP+ D S + G++H+Y Sbjct: 51 FALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPL-DEQSSVVPGLLHKYR 109 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF+GGDP Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIFSGGDP 167 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+ L+ ++ L I H++ LR HSR+P+V P+RI L Q L ++ + H N Sbjct: 168 LMAKDHELEWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLMVTHIN 227 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 H E ++ + L AG+ LL+QSVLL+ IND LA L + I PYYLH Sbjct: 228 HAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPYYLHVL 287 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D G +HF ++ E + IV L +SG P ++ G K +D Sbjct: 288 DKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336 >gi|145636539|ref|ZP_01792207.1| thiamin transporter membrane protein [Haemophilus influenzae PittHH] gi|145270364|gb|EDK10299.1| thiamin transporter membrane protein [Haemophilus influenzae PittHH] Length = 338 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 97/269 (36%), Positives = 137/269 (50%), Gaps = 2/269 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V CR+CFRR + + K + AL YI +I EVIF+GGDPL+ L ++ Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAAHPEIEEVIFSGGDPLMAKDHELAWLI 180 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 K L I H+Q LR H+R+P+V PQRI E L E+ + H NHP E + A Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHA 240 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++ Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315 E +I +L+ SG P ++ G Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 329 >gi|84386955|ref|ZP_00989979.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01] gi|84378245|gb|EAP95104.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01] Length = 340 Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 143/276 (51%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ +P EE + DP+ + ++ + G++H+Y +R L+ + C + CR Sbjct: 67 NPHDPLLRQVLPLNEEFEVHQGYSADPLEEQENA-IPGLLHKYKNRALMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L Y+ + +I EVI +GGDPL+ L+ ++ + Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQTSLDYVTQHPEINEVILSGGDPLMAKDSELEWLINAI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I HV+ +R HSR+P+V P R+ EL Q L V + H NH E + E A + Sbjct: 183 EQIPHVKTVRIHSRLPVVIPARVTDELCQLLANTRLNVVMVSHINHANEINLELKQAFHK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G LL+Q V+LKG+N+ L L + + PYY+H D G +HF ++ EE Sbjct: 243 LKQTGATLLNQGVMLKGVNNSANSLKELSENLFDAGVLPYYMHVLDKVQGAAHFYISDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++ L ++SG P ++ G K +D H Sbjct: 303 AKRHFKGLISEVSGYLVPKLTREIGGRSSKTPLDLH 338 >gi|304311512|ref|YP_003811110.1| hypothetical protein HDN1F_18820 [gamma proteobacterium HdN1] gi|301797245|emb|CBL45465.1| Conserved hypothetical protein [gamma proteobacterium HdN1] Length = 336 Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 88/317 (27%), Positives = 164/317 (51%), Gaps = 5/317 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + ++S +L+ + + ++ + + + + + I +DP+ RQ +PQ Sbjct: 13 QLVSSVDELWRLLDLPQSLLESASAAARAFPLRVPQAFVDKIQKGKLDDPLLRQILPQGL 72 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P+ DP+ + + +P +G++H+Y R+L+ C + CR+CFRR + Sbjct: 73 ELTPPPDFVTDPLAELHANPHRGLLHKYQSRVLIIAGSACAINCRYCFRRHF--PYEDNQ 130 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS + + +++ ++ EVIF+GGDPLI S+ RLQ+ + L + ++ +RFH+R P Sbjct: 131 LSQAQFDELIQHLETHPEVNEVIFSGGDPLINSNARLQRWVDALLLLPQLKRIRFHTRTP 190 Query: 186 IVDPQRINPELIQCLK---EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 +V P RI+ L+ + ++G+ + +H+NHP E A+ +L +A + L +Q+V Sbjct: 191 VVVPARIDEGLLALFRSIAQSGRNAILVVHSNHPSELDHHFDTAMRKLRDAQVTLFNQAV 250 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LL+G+ND + A L + + PYYLH D AG F + E ++ + ++ Sbjct: 251 LLRGVNDHVDAQAALSERLFDAGVLPYYLHLLDPVAGAHDFSIHDTEAFELYRQMAARLP 310 Query: 303 GLCQPFYILDLPGGYGK 319 G P ++PG K Sbjct: 311 GFLLPRLAREVPGAPAK 327 >gi|218708305|ref|YP_002415926.1| hypothetical protein VS_0243 [Vibrio splendidus LGP32] gi|218321324|emb|CAV17274.1| Hypothetical protein VS_0243 [Vibrio splendidus LGP32] Length = 340 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 91/276 (32%), Positives = 142/276 (51%), Gaps = 5/276 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ +P EE + DP+ + +++ + G++H+Y R L+ + C + CR Sbjct: 67 NPHDPLLRQVLPLSEEFEVHQGYSADPLEEQDNA-IPGLLHKYKSRALMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L Y+ + +I EVI +GGDPL+ L+ ++ + Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I HV+ +R HSR+P+V P R+ EL Q L V + H NH E + E A + Sbjct: 183 EQIPHVKTVRIHSRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G LL+Q V+LKG+N+ L L + I PYY+H D G +HF ++ EE Sbjct: 243 LKQTGATLLNQGVMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + L ++SG P ++ G K +D H Sbjct: 303 AKHHFKGLISEVSGYLVPKLTREIGGRSSKTPLDLH 338 >gi|261416917|ref|YP_003250600.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373373|gb|ACX76118.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 322 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 95/283 (33%), Positives = 148/283 (52%), Gaps = 12/283 (4%) Query: 44 ANLINPHNPNDPIA--RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101 A+LI N +P+ R+ +P +EL P +DP+GD + I+ +Y +R L+ Sbjct: 48 ADLIK--NSAEPVKLLREVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVS 105 Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C V CRFCFRR + S ++ + IWEVI +GGDPL L Sbjct: 106 TSACGVRCRFCFRRNYPFQDTQNIASEVSN-----WLDVHTSIWEVILSGGDPLTLGPGP 160 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEF 219 + +++ + + V LR H+R+PI+ P + + + L+E A + +H NHP E Sbjct: 161 FRDLVEAIAFHPSVTTLRIHTRLPIMRPDLVM-QHFELLRELPARFNCVLVVHVNHPDEL 219 Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279 EE+ A ++L +G LL+QSVLLKG+NDD E L L R E + PYYLH D A G Sbjct: 220 DEESAAVFAQLKFSGWTLLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKG 279 Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 +HF ++ E ++++A ++ K+ G P + ++ G K I Sbjct: 280 VAHFEVSDERARELIAQIRTKLPGYLVPKLVREIAGEKSKTPI 322 >gi|259907161|ref|YP_002647517.1| hypothetical protein EpC_04800 [Erwinia pyrifoliae Ep1/96] gi|224962783|emb|CAX54238.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96] gi|283476968|emb|CAY72852.1| Uncharacterized kamA family protein TP_0121 [Erwinia pyrifoliae DSM 12163] Length = 342 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 150/289 (51%), Gaps = 3/289 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A + +P DP+ Q I ++E P DP+ D S + G++H+Y Sbjct: 51 FALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPL-DEQSSVVPGLLHKYR 109 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF+GGDP Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIFSGGDP 167 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+ L ++ L I H++ LR HSR+P+V P+RI L Q L ++ + H N Sbjct: 168 LMAKDHELDWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLMVTHIN 227 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 H E ++ + L AG+ LL+QSVLL+ IND LA L + I PYYLH Sbjct: 228 HAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPYYLHVL 287 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D G +HF ++ E + IV L +SG P ++ G K +D Sbjct: 288 DKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336 >gi|78357789|ref|YP_389238.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220194|gb|ABB39543.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 384 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 103/308 (33%), Positives = 159/308 (51%), Gaps = 12/308 (3%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 M +H T TS N+ + ++ ++ + +Y+ +LIN +P DPI R Sbjct: 1 MTRQHATYTSC---INSLPLDAQEARALRPVMEYYAFRANDYYLSLINWDDPADPIRRII 57 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E E DP + ++ + G+ H+Y D +L C CRFCFR+ + Sbjct: 58 VPHPDETKDWGEL--DPSDEARYTAVPGMQHKYRDTAILLAGKACGGLCRFCFRKRIF-- 113 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 +G DT ALAYI+ +I V+ +GGDPL+L L+ +LK L ++H+Q +R Sbjct: 114 MEGGTPPVPDTGKALAYIRAHKEITNVLISGGDPLLLPLAELEHILKGLDTVEHLQFIRI 173 Query: 181 HSRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGI 235 SR+P+ DP I N L++ L +P +Y+ H NHP E S A+ A+ L AGI Sbjct: 174 GSRMPVFDPGLIAGNTRLLELLSRYSRPGRKLYMQTHFNHPRELSPLALEAVDALQRAGI 233 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 I+ +Q+ LL+G+ND PE L+ L + PYYL G HF + IEEG I+ Sbjct: 234 IMTNQTPLLRGVNDCPETLSELFAKLAGAGVPPYYLFVCRPTKGNRHFTVPIEEGYDILQ 293 Query: 296 SLKEKISG 303 ++ +SG Sbjct: 294 KAQKTLSG 301 >gi|302326000|gb|ADL25201.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 332 Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust. Identities = 95/283 (33%), Positives = 148/283 (52%), Gaps = 12/283 (4%) Query: 44 ANLINPHNPNDPIA--RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101 A+LI N +P+ R+ +P +EL P +DP+GD + I+ +Y +R L+ Sbjct: 58 ADLIK--NSAEPVKLLREVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVS 115 Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C V CRFCFRR + S ++ + IWEVI +GGDPL L Sbjct: 116 TSACGVRCRFCFRRNYPFQDTQNIASEVSN-----WLDVHTSIWEVILSGGDPLTLGPGP 170 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEF 219 + +++ + + V LR H+R+PI+ P + + + L+E A + +H NHP E Sbjct: 171 FRDLVEAIAFHPSVTTLRIHTRLPIMRPDLVM-QHFELLRELPARFNCVLVVHVNHPDEL 229 Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279 EE+ A ++L +G LL+QSVLLKG+NDD E L L R E + PYYLH D A G Sbjct: 230 DEESAAVFAQLKFSGWTLLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKG 289 Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 +HF ++ E ++++A ++ K+ G P + ++ G K I Sbjct: 290 VAHFEVSDERARELIAQIRTKLPGYLVPKLVREIAGEKSKTPI 332 >gi|156972506|ref|YP_001443413.1| lysine 2;3-aminomutase [Vibrio harveyi ATCC BAA-1116] gi|156524100|gb|ABU69186.1| hypothetical protein VIBHAR_00138 [Vibrio harveyi ATCC BAA-1116] Length = 340 Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 90/275 (32%), Positives = 148/275 (53%), Gaps = 3/275 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ RQ +P EE + DP+ + ++ L G++H+Y +R L+ + C V CR Sbjct: 67 NPYDPLLRQVLPLSEEFEVHEGYSNDPLEEQDNE-LPGLLHKYRNRALMIVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + Sbjct: 126 YCFRRHFPYQENKS--GKQAWIKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIA 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR HSR+P+V P RI EL Q L+ + + + H NH E + E A +++L Sbjct: 184 QIPHIKRLRIHSRLPVVIPARITDELCQRLRASRLQIVLVTHINHANEINAEFAAQMAKL 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ LL+Q VLLK +N+ E L + I PYY+H D G +H+ ++ EE Sbjct: 244 KQAGVTLLNQGVLLKDVNNSIEAQVALNEALFDAGILPYYVHVLDKVQGAAHYFVSDEEA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + I+ + ++SG P ++ G K +D H Sbjct: 304 KTIMRGVITRVSGYLVPKLTREIGGRPSKTPLDLH 338 >gi|148825389|ref|YP_001290142.1| DNA repair protein RecO [Haemophilus influenzae PittEE] gi|229846415|ref|ZP_04466523.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1] gi|148715549|gb|ABQ97759.1| DNA repair protein RecO [Haemophilus influenzae PittEE] gi|229810508|gb|EEP46226.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1] gi|309972513|gb|ADO95714.1| Conserved hypothetical protein [Haemophilus influenzae R2846] Length = 338 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 97/269 (36%), Positives = 137/269 (50%), Gaps = 2/269 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V CR+CFRR + + K + AL YI +I EVIF+GGDPL+ L ++ Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 180 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 K L I H+Q LR H+R+P+V PQRI E L E+ + H NHP E + A Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHA 240 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++ Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315 E +I +L+ SG P ++ G Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 329 >gi|304413330|ref|ZP_07394803.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1] gi|304284173|gb|EFL92566.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1] Length = 338 Score = 162 bits (411), Expect = 5e-38, Method: Compositional matrix adjust. Identities = 92/277 (33%), Positives = 149/277 (53%), Gaps = 7/277 (2%) Query: 46 LINPHNPNDPIARQFIPQKEELNILPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 L+ + NDP+ RQ + E I PE+ DP+ + + G++H+Y +R LL + Sbjct: 62 LMRKGDANDPLLRQVLTSSAEF-ISPEDFITDPLAEQ-RTAAPGLLHKYGNRALLLVKGS 119 Query: 105 CPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C + CR+CFRR +G + K+ + AL YI++ ++ E+IF+GGDPL+ + L Sbjct: 120 CAINCRYCFRRHFPYQDNQG---NKKNWQLALDYIRQHPELDEIIFSGGDPLMAKDRELS 176 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223 ++ L I H++ LR H+R+P+V P RI L Q + + + H NH E Sbjct: 177 WLIDALEKIAHIKRLRIHTRLPVVIPARITIALCQKFHASRLQIVLVTHINHANEIDNVL 236 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283 ++++L G+ LL+QSVLL+G+ND+ E+LA L I PYYLH D G +HF Sbjct: 237 CDSMAKLKTKGVTLLNQSVLLRGVNDNVEVLAQLSNALFNAGILPYYLHVLDKVKGAAHF 296 Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 + +E ++++ L ISG P + ++ G K Sbjct: 297 MVNDDEARRLINGLLGCISGYLVPRLVREIAGEKSKT 333 >gi|292489640|ref|YP_003532530.1| kamA family protein [Erwinia amylovora CFBP1430] gi|292898145|ref|YP_003537514.1| hypothetical protein EAM_0421 [Erwinia amylovora ATCC 49946] gi|291197993|emb|CBJ45095.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946] gi|291555077|emb|CBA23181.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora CFBP1430] gi|312173816|emb|CBX82070.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora ATCC BAA-2158] Length = 342 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 95/289 (32%), Positives = 149/289 (51%), Gaps = 3/289 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A + +P DP+ Q I ++E P DP+ D S + G++H+Y Sbjct: 51 FALRVPKAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPL-DEQSSVVPGLLHKYR 109 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+I +GGDP Sbjct: 110 NRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIILSGGDP 167 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+ L ++ L I H++ LR HSR+P+V P+RI L Q L + + H N Sbjct: 168 LMAKDHELDWLIGQLEQIPHLRRLRIHSRLPVVIPKRITEALCQRLAQTRLQTLMVTHIN 227 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 H E E+ + L AG+ LL+QSVLL+ IND +LA L + I PYYLH Sbjct: 228 HAQEIDEDLRHGMRMLKRAGVTLLNQSVLLRDINDSAPVLAALSNALFDAGILPYYLHVL 287 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D G +HF ++ E + IV L +SG P ++ G K +D Sbjct: 288 DKVQGAAHFYVSDERARIIVRELLTMVSGYMVPKLAREIGGEPSKTPLD 336 >gi|160938417|ref|ZP_02085772.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC BAA-613] gi|158438790|gb|EDP16547.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC BAA-613] Length = 419 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 98/302 (32%), Positives = 162/302 (53%), Gaps = 10/302 (3%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEE 66 +T AQ+L + ++ + + I + + +T +LI+ +NP DP+ R IP E Sbjct: 65 VTRAQELKTYMRLTSQEEEHMTRILEQFPMTVTRYYLSLIDWNNPEQDPVFRMSIPSIRE 124 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ + D G+ +++ L G+ H+Y L+ H C +YCR CFR+ +VG G Sbjct: 125 TDLSGDF--DTSGEADNTVLPGLQHKYRQTALILSTHRCAMYCRHCFRKRLVGISGGETA 182 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + D AA YI +I V+ +GGD + S++ +++ L+ IKH+ ++RF +R P+ Sbjct: 183 GNVDQMAA--YIVSHPEITNVLISGGDSFLNSNQIIRRYLEAFSSIKHLDLIRFGTRTPV 240 Query: 187 VDPQRI--NPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 V P RI +PEL+ L K +Y+ NH E + +A+ AI L +AGII+ +Q+V Sbjct: 241 VLPMRIYDDPELLDILARYTKIKQIYVVTQFNHSNELTPQAVKAIRCLMDAGIIVKNQTV 300 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKI 301 LLKGINDD L L++ + PYY+ +G S F++ + EG +IV K Sbjct: 301 LLKGINDDAGSLGTLLKNLTRYGVIPYYIFQCRPVSGVKSQFQIPLTEGCRIVEEAKNMQ 360 Query: 302 SG 303 +G Sbjct: 361 NG 362 >gi|239625483|ref|ZP_04668514.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales bacterium 1_7_47_FAA] gi|239519713|gb|EEQ59579.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales bacterium 1_7_47FAA] Length = 387 Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 93/302 (30%), Positives = 167/302 (55%), Gaps = 10/302 (3%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEE 66 +T A +L + Q++ + I + + + +T +LIN NP DP+ R IP EE Sbjct: 31 ITKASELREYMDLTDSQVEHLDRILSQFPMTVTRYYLSLINWDNPFTDPVFRMCIPSIEE 90 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ + D G+ +++ + G+ H+Y L+ H C +YCR CFR+ +VG Sbjct: 91 TDLSGDF--DTSGEADNTVISGLQHKYSQTALILSTHRCAMYCRHCFRKRLVGISDDE-- 146 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 ++ + E AY+ + S+I ++ +GGD + S++ +++ L+ I H+ ++RF +R P+ Sbjct: 147 TADNIEEMAAYVSQHSEISNILISGGDAFLNSNQVIRRYLEQFCSIPHLDLIRFGTRTPV 206 Query: 187 VDPQRI--NPELIQCLKE--AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 V P RI +PEL+ LK K +Y+ NHP E + EA AI L ++GI++ +Q+V Sbjct: 207 VLPMRIYDDPELLALLKTYTQKKQIYVVTQFNHPNEITHEARKAIKALLDSGIVVKNQTV 266 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKI 301 LLKG+ND+ + L L++ + PYY+ +G + F+L +++G +IV + K Sbjct: 267 LLKGVNDNSQTLGLLLKDLTRCGVIPYYIFQCRPVSGVKNQFQLPLKQGYEIVEAAKHLQ 326 Query: 302 SG 303 +G Sbjct: 327 NG 328 >gi|301169034|emb|CBW28631.1| predicted lysine aminomutase [Haemophilus influenzae 10810] Length = 338 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 98/274 (35%), Positives = 137/274 (50%), Gaps = 2/274 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V CR+CFRR + + K + AL YI +I EVIF+GGDPL+ L ++ Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 180 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 240 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++ Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 E +I +L+ SG P ++ G K Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334 >gi|145628680|ref|ZP_01784480.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21] gi|144979150|gb|EDJ88836.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21] Length = 309 Score = 162 bits (410), Expect = 6e-38, Method: Compositional matrix adjust. Identities = 97/269 (36%), Positives = 136/269 (50%), Gaps = 2/269 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C Sbjct: 34 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCA 93 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V CR+CFRR + + K + AL YI +I EVIF+GGDPL+ L ++ Sbjct: 94 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 151 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A Sbjct: 152 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 211 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++ Sbjct: 212 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 271 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPG 315 E +I +L+ SG P ++ G Sbjct: 272 DIEAMQIYKTLQSLTSGYLVPKLAREIAG 300 >gi|148244460|ref|YP_001219154.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA] gi|146326287|dbj|BAF61430.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA] Length = 314 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 93/277 (33%), Positives = 148/277 (53%), Gaps = 7/277 (2%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A LI+ N +DP+ +Q I K L+ P+ D +SP+ G++H+YP+R+LL Sbjct: 41 FARLIDKRNKDDPLLKQVITPKN-LSKSTNFSLSPLEDEKYSPVAGLIHKYPNRVLLIAS 99 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 VC ++C+FCFR+ + + + + + YI +I EVI +GGDPL LS +L Sbjct: 100 QVCAIHCQFCFRQNFNYVEHDAISNWVEIQN---YIINDVKINEVILSGGDPLSLSDDKL 156 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 ++ + +I+H++ LR H+R +V+P RI +L++ ++ + I +H NH E S + Sbjct: 157 STLIDNIAHIEHIKTLRVHTRNAVVEPSRITRKLVEIFNQSRLNIVIVLHINHAQELSVQ 216 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 I L + LLSQSVLL+G+ND E+L L + +L I PYYLH D G Sbjct: 217 FAQKIIELTR--VTLLSQSVLLRGVNDSIEVLTELCLSLFDLGILPYYLHMLDKVQGAQD 274 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 F + + ++ LK +SG P + D Y K Sbjct: 275 FLVKDDYAIQLHQQLKSNLSGYLVPKLVRD-SSSYSK 310 >gi|325577289|ref|ZP_08147773.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392] gi|325160871|gb|EGC72992.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392] Length = 340 Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust. Identities = 95/258 (36%), Positives = 133/258 (51%), Gaps = 4/258 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ Q + ++E +DP+ + + + I+H+Y +R+L C V CR Sbjct: 69 NPKDPLFLQVMTVQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCR 128 Query: 111 FCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR Q G +S K A+ YI +I EVIF+GGDP++ +L+ L Sbjct: 129 YCFRRHFPYDQNPGNKVSWKQ---AIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERL 185 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 IKH+Q LR HSR+P+V P+RI E L + H NHP E E A+ + Sbjct: 186 EKIKHLQRLRIHSRLPVVIPERITDEFCDLLLNSPLQAVFVTHINHPNEIDEGLAFAMQK 245 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L A +ILL+QSVLLK +ND+P L L + I PYYLH D G SHF ++ E Sbjct: 246 LTEAKVILLNQSVLLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDER 305 Query: 290 GQKIVASLKEKISGLCQP 307 +I L+ SG P Sbjct: 306 ALQIYRELQALTSGYLVP 323 >gi|268590834|ref|ZP_06125055.1| KamA family protein [Providencia rettgeri DSM 1131] gi|291313616|gb|EFE54069.1| KamA family protein [Providencia rettgeri DSM 1131] Length = 342 Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 92/274 (33%), Positives = 147/274 (53%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P DP+ Q + K E +I P DP+ + ++ + ++H+Y +R LL + C V CR Sbjct: 67 DPLDPLLLQVLTAKAEFDIHPGFSTDPLEEQDNE-IPSLLHKYHNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + A+ YI+ +++ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYEDNKG---NKNNWLMAVDYIKNHTELNEIIFSGGDPLMAKDHELDWLISQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H+Q LR H+R+P+V P+RI L + L + V + H NH E E A+ + Sbjct: 183 EAIPHIQRLRIHTRLPVVIPERITETLCKRLASSRLQVIMVTHVNHANEIDESFTNAMQK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L +G+ LL+QSVLL+ +ND+ L NL + I PYYLH D G +HF ++ E Sbjct: 243 LKLSGVTLLNQSVLLRQVNDNVTALMNLSNALFDTGILPYYLHVLDKVQGAAHFLVSDTE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++++ L K+SG P ++ G K +D Sbjct: 303 ARQLIQQLLSKVSGYLVPKLAREIGGEPSKTLLD 336 >gi|301166960|emb|CBW26539.1| putative L-lysine 2,3-aminomutase [Bacteriovorax marinus SJ] Length = 447 Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 93/333 (27%), Positives = 180/333 (54%), Gaps = 19/333 (5%) Query: 20 IKKEQIDEIK--EISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEE-LNILPEERE 75 I KE +D+IK + +I +TP I LI+ +P + P+ +QF+P + L P + Sbjct: 62 ISKEHMDDIKAGQKITPMNIRITPYIFALIDWRDPLSCPLRKQFLPMGSQFLEDHPYYQS 121 Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSK 129 D +G++ SP+ + HRYPD++L +CPVYC +C R ++G ++ + K Sbjct: 122 DSLGEDVDSPVPMLTHRYPDKVLFLPTTICPVYCSYCTRSRIIGGSTESIEKETYGANQK 181 Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 + Y+ ++ +V+ +GGD +L+ K+++ + + L I H++ +R ++ + P Sbjct: 182 KWDDVFEYLSNHPKVEDVVVSGGDAFMLTPKQIRYIGENLLRIPHIRRIRLATKGVAIFP 241 Query: 190 QRI--NPELIQCLKEA-------GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 Q++ + + + +++ GK V I H + E ++ + A+ RL AGI++ +Q Sbjct: 242 QKVLTDDDWFEAVQDIHKLGRSFGKQVVIHTHFSCAKEITKWSQMAMDRLFQAGIVVRNQ 301 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VL +G+N+ + + L R L I+PYY++ D+ G HFR T++E +++ +++ Sbjct: 302 AVLQEGVNNHVDEMVLLTRQVGYLNIQPYYVYMHDMVPGCEHFRTTLKEAEELEKAVRGT 361 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 +G P ++ DLPGG GK + ++ NG Sbjct: 362 TAGFNTPTFVCDLPGGGGKRHVASYEYYDEENG 394 >gi|145638760|ref|ZP_01794369.1| DNA repair protein RecO [Haemophilus influenzae PittII] gi|145272355|gb|EDK12263.1| DNA repair protein RecO [Haemophilus influenzae PittII] gi|309750250|gb|ADO80234.1| Conserved hypothetical protein [Haemophilus influenzae R2866] Length = 338 Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust. Identities = 98/274 (35%), Positives = 137/274 (50%), Gaps = 2/274 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCA 122 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V CR+CFRR + + K + AL YI +I EVIF+GGDPL+ L ++ Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 180 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 240 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L + LL+QSVLLKG+NDD +IL L + I PYYLH D G SHF ++ Sbjct: 241 MQKLNAVNVTLLNQSVLLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 E +I +L+ SG P ++ G K Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334 >gi|254491873|ref|ZP_05105052.1| KamA family protein [Methylophaga thiooxidans DMS010] gi|224463351|gb|EEF79621.1| KamA family protein [Methylophaga thiooxydans DMS010] Length = 335 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 96/272 (35%), Positives = 139/272 (51%), Gaps = 2/272 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + NDP+ RQ P +E DP+GD+ GI+ +Y R LL C ++CR Sbjct: 65 DANDPLLRQVFPLIDEGYPAEGYLTDPVGDHLAVTSPGILQKYQGRALLLTTGACAIHCR 124 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR S + S + ++ + I EVI +GGDPL L +L K++ L Sbjct: 125 YCFRRHFPYSDSNPL--SSQWQQSIEQLASDETISEVILSGGDPLSLHDDKLAKLVADLA 182 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR H+R+PIV P+RIN L+ ++ V + IHANH E A A+ L Sbjct: 183 EIPHLKRLRIHTRLPIVLPERINDSLLNWIQATRFKVVVVIHANHANEIDAHAEQALISL 242 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG LL+Q+VLL+GIND E L+ L ++ + PYYLH D AG HF + Sbjct: 243 KQAGCQLLNQTVLLRGINDSVESLSALSERLNDVDVMPYYLHLLDKVAGAQHFDVNQVRA 302 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 K+V L++ + G P + + G K I Sbjct: 303 VKLVDDLRKVLPGYLVPRLVREQQGEASKTVI 334 >gi|52424562|ref|YP_087699.1| KamA protein [Mannheimia succiniciproducens MBEL55E] gi|52306614|gb|AAU37114.1| KamA protein [Mannheimia succiniciproducens MBEL55E] Length = 336 Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 94/258 (36%), Positives = 135/258 (52%), Gaps = 5/258 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 N DP+ Q + +E +DP+ + I+H+Y +R+LL + C + CR Sbjct: 66 NAQDPLFLQAMSSADEFLTADGFSKDPL-EEQQVVAPNILHKYKNRLLLMVKGGCAINCR 124 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR +G + + + AL YI QI EVIF+GGDPL+ L ++K L Sbjct: 125 YCFRRHFPYADNQG---NKANWQKALDYISANPQIEEVIFSGGDPLMAKDHELDWLIKKL 181 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H+Q LR H+R+P+V PQRI + L E+ + H NH E E+ A+++ Sbjct: 182 EKIPHLQRLRIHTRLPVVIPQRITGAFCKILTESRLNTVLVTHINHGNEIDEQLTRALNK 241 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L NAG++LL+QSVLLK IND+ + L NL I PYYLH D G SHF + + Sbjct: 242 LKNAGVVLLNQSVLLKNINDNAQTLKNLSDKLFRAGILPYYLHLLDKVEGASHFYVPDQR 301 Query: 290 GQKIVASLKEKISGLCQP 307 +I L+ SG P Sbjct: 302 AVEIYRELQSLTSGYLVP 319 >gi|315634854|ref|ZP_07890136.1| KamA family protein [Aggregatibacter segnis ATCC 33393] gi|315476406|gb|EFU67156.1| KamA family protein [Aggregatibacter segnis ATCC 33393] Length = 339 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 94/259 (36%), Positives = 138/259 (53%), Gaps = 5/259 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYC 109 NP DP+ Q + +E +DP+ + + + + I+H+Y +R+L + C V C Sbjct: 67 NPKDPLFLQVMSSADEFLQAEGFSKDPLEEQEDKNVVSNILHKYHNRLLFMVKGGCAVNC 126 Query: 110 RFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 R+CFRR KGT ++ + AL YI E+ +I EVIF+GGDPL+ L+ ++K Sbjct: 127 RYCFRRHFPYQDNKGT---KQNWQKALQYIAERPEIEEVIFSGGDPLMAKDHELEWLIKH 183 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 L I H++ LR HSR+P+V PQRI + L + + H NH E + A++ Sbjct: 184 LENIPHLKRLRIHSRLPVVIPQRITDTFCRLLAQTRLQKILVTHVNHANEIDADFAHAMA 243 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288 +L + G++LL+QSVLLK +NDD IL L + I PYYLH D G +HF L Sbjct: 244 KLKDCGVVLLNQSVLLKNVNDDALILKTLSDRLFSVGILPYYLHLLDKVEGATHFYLDDA 303 Query: 289 EGQKIVASLKEKISGLCQP 307 KI L+ SG P Sbjct: 304 RALKIYKELQRISSGYLVP 322 >gi|301154946|emb|CBW14409.1| predicted lysine aminomutase [Haemophilus parainfluenzae T3T1] Length = 340 Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust. Identities = 92/257 (35%), Positives = 133/257 (51%), Gaps = 2/257 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ Q + ++E +DP+ + + + I+H+Y +R+L C V CR Sbjct: 69 NPKDPLFLQVMTAQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCR 128 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR Q +S + A+ YI +I EVIF+GGDP++ +L+ L Sbjct: 129 YCFRRHFPYDQNPGNKTS--WQQAIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERLE 186 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H+Q LR HSR+P+V P+RI E L ++ H NHP E EE A+ +L Sbjct: 187 KIPHLQRLRIHSRLPVVIPERITDEFCDLLLKSPLQTVFVTHINHPNEIDEELALAMQKL 246 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 A + LL+QSVLLK +ND+P L L + I PYYLH D G SHF ++ E+ Sbjct: 247 VGAKVTLLNQSVLLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDEKA 306 Query: 291 QKIVASLKEKISGLCQP 307 +I L+ SG P Sbjct: 307 LQIYKELQALTSGYLVP 323 >gi|307249881|ref|ZP_07531855.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858070|gb|EFM90152.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 333 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 92/261 (35%), Positives = 138/261 (52%), Gaps = 11/261 (4%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + NDP+ Q + EE + +DP+ + HSP I+H+Y +R+L + + C + CR Sbjct: 64 DKNDPLFLQAMSAAEEFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCR 122 Query: 111 FCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 +CFRR V S K + L YI +++ EVIF+GGDPL+ L ++ Sbjct: 123 YCFRRHFPYDDVKSGKAV------WQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLI 176 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 L I H++ LR H+R+P+V P RI +L L ++ V + H NHP E E Sbjct: 177 SALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADK 236 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 +++L A ++LL+QSVLLKG+ND+ +IL L E + PYYLH D G SHF + Sbjct: 237 LNQLRQANVVLLNQSVLLKGVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIE 296 Query: 287 IEEGQKIVASLKEKISGLCQP 307 + +I L+ SG P Sbjct: 297 DRQAAEIYKELQRITSGYLVP 317 >gi|86147223|ref|ZP_01065538.1| lysine 2;3-aminomutase [Vibrio sp. MED222] gi|85834938|gb|EAQ53081.1| lysine 2;3-aminomutase [Vibrio sp. MED222] Length = 340 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 90/274 (32%), Positives = 141/274 (51%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ +P EE ++ DP+ + ++ + G++H+Y R L+ + C + CR Sbjct: 67 NPHDPLLRQVLPLSEEFDVHQGYSADPLEEQENA-IPGLLHKYKSRALMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG S + +L Y+ + +I EVI +GGDPL+ L+ ++ + Sbjct: 126 YCFRRHFPYQDNKG---SKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I HV+ +R HSR+P+V P R+ EL Q L V + H NH E + E A + Sbjct: 183 EQIPHVKTVRIHSRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G LL+Q V+LKG+N+ L L + I PYY+H D G +HF ++ EE Sbjct: 243 LKQTGATLLNQGVMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEE 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + L ++SG P ++ G K +D Sbjct: 303 AKHHFKGLISEVSGYLVPKLTREIGGRSSKTPLD 336 >gi|256823217|ref|YP_003147180.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM 16069] gi|256796756|gb|ACV27412.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM 16069] Length = 349 Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 93/273 (34%), Positives = 138/273 (50%), Gaps = 3/273 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NPNDP+ RQ + +E + DP+ + N S + G++H+Y R+L+ L C + CR Sbjct: 71 NPNDPLLRQVLAVSDENQEVAGFVPDPLQEQN-SEVPGLLHKYRSRVLVMLSTACAINCR 129 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRRE + + Y+ +I EVI +GGDPL ++ L+ ++ L Sbjct: 130 YCFRREFPYQEHQA--GRNGWQPIFDYLTAHPEINEVILSGGDPLAVNDSYLKDFIQQLE 187 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I + LR H+R+P+V PQR+ LI L + + +H NHP E E A+ RL Sbjct: 188 RIPSIIRLRIHTRLPLVIPQRVTQGLIDALLQTRLQTVVVLHINHPNEMGELFAQAVRRL 247 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 GI LL+QSVLL G+N++ LA L I PYYLH D G HF + + Sbjct: 248 HQNGIHLLNQSVLLDGVNNNSSTLAELSEKLFAHHILPYYLHQLDKVRGAHHFAVEEAQA 307 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 KI+ L +++G P + + G K ID Sbjct: 308 IKIMQELNTRLAGFLVPKLVREEAGKTSKTPID 340 >gi|329123649|ref|ZP_08252209.1| KamA family protein [Haemophilus aegyptius ATCC 11116] gi|327469848|gb|EGF15313.1| KamA family protein [Haemophilus aegyptius ATCC 11116] Length = 338 Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 97/274 (35%), Positives = 137/274 (50%), Gaps = 2/274 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMTKGGCA 122 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V CR+CFRR + + K + AL YI S+I EVIF+GGDPL+ L ++ Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLI 180 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNA 240 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L + LL+QSVLL+ +NDD +IL L + I PYYLH D G SHF ++ Sbjct: 241 MQKLNAVNVTLLNQSVLLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 E +I +L+ SG P ++ G K Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334 >gi|83771333|dbj|BAE61465.1| unnamed protein product [Aspergillus oryzae] Length = 464 Score = 160 bits (405), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 102/303 (33%), Positives = 157/303 (51%), Gaps = 19/303 (6%) Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELN-ILPEEREDPIGDNNHSPLKGIVHRY 93 ++ LTP I +LIN +DPI RQFIP P+ + D + + + SP+KG+VHRY Sbjct: 117 AVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRY 176 Query: 94 PDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLS------SKDTEAALAYIQEKSQIWE 146 PD+ L VCPVYCRFC R VG Q TV K E YI ++ + Sbjct: 177 PDKNDSYLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTD 236 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL--- 200 V+ +GGD L +L+++ TL I H++ +RF S+ V P RI + E + L Sbjct: 237 VVVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRVLIEI 296 Query: 201 ----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 +E GK + + H NHP E S A +L + + + +Q+VLL +N++ + Sbjct: 297 SNRGREKGKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKR 356 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L+R + I+PYY++ D+ G R + + I + ++ I+G P +++DLPGG Sbjct: 357 LIRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGG 416 Query: 317 YGK 319 GK Sbjct: 417 GGK 419 >gi|319786811|ref|YP_004146286.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas suwonensis 11-1] gi|317465323|gb|ADV27055.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas suwonensis 11-1] Length = 338 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 93/267 (34%), Positives = 141/267 (52%), Gaps = 2/267 (0%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P +E I+P D +GD G++ +Y R LL C + CR+C Sbjct: 71 HDPLLRQVLPVVDEERIVPGFGLDAVGDGLAKKADGVIQKYHGRALLVATGSCAINCRYC 130 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR +++ + A+A I I EVI +GGDPL L+ +L ++ L I Sbjct: 131 FRRHFPYAEE--TAARDGWAGAVAAIAADPGIDEVILSGGDPLSLATSKLAELTAQLATI 188 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR HSR+P+V P+RI+ ++ + PV IHANH EF A+ RL Sbjct: 189 PHIRRLRIHSRLPVVLPERIDDAFVEWMSALPWPVAFVIHANHANEFDASVDQALGRLRQ 248 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AG LL+Q+VLL+G+ND + LA+L + PYYLH D G +HF + E ++ Sbjct: 249 AGAQLLNQAVLLRGVNDSVDALADLSERSYAAGVLPYYLHQLDRIQGAAHFEVGDERARE 308 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGK 319 + L ++SG P + ++ G GK Sbjct: 309 LHRQLAARLSGYLVPKLVREVQGDPGK 335 >gi|322514442|ref|ZP_08067484.1| KamA family protein [Actinobacillus ureae ATCC 25976] gi|322119649|gb|EFX91711.1| KamA family protein [Actinobacillus ureae ATCC 25976] Length = 333 Score = 160 bits (405), Expect = 3e-37, Method: Compositional matrix adjust. Identities = 92/261 (35%), Positives = 139/261 (53%), Gaps = 11/261 (4%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + NDP+ Q + EE + +DP+ + HSP I+H+Y +R+L + + C + CR Sbjct: 64 DKNDPLFLQAMSAAEEFLQMQGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCR 122 Query: 111 FCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 +CFRR V S K + L YI +++ EVIF+GGDPL+ L ++ Sbjct: 123 YCFRRHFPYDEVKSGKAV------WQQGLDYIAAHTELEEVIFSGGDPLMAKDSELNWLI 176 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 L I H++ LR H+R+P+V P RI +L L ++ V I H NHP E E + Sbjct: 177 SALEQIPHIKTLRIHTRLPVVIPSRITEQLCNRLSKSRLKVVIVTHINHPNEVDEVLVDR 236 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 +++L A ++LL+QSVLLKGIND+ + L L + + PYYLH D G SHF + Sbjct: 237 LNQLRQANVVLLNQSVLLKGINDNAQTLKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIE 296 Query: 287 IEEGQKIVASLKEKISGLCQP 307 ++ +I L+ SG P Sbjct: 297 DQQAAEIYKELQRISSGYLVP 317 >gi|149910194|ref|ZP_01898840.1| hypothetical protein PE36_23316 [Moritella sp. PE36] gi|149806780|gb|EDM66744.1| hypothetical protein PE36_23316 [Moritella sp. PE36] Length = 337 Score = 160 bits (404), Expect = 4e-37, Method: Compositional matrix adjust. Identities = 93/272 (34%), Positives = 153/272 (56%), Gaps = 3/272 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP DP+ Q +P+++E +DP+ D + + + G++H+Y +R+L + C + CR Sbjct: 67 NPKDPLFLQVMPKQQEFIQQAGFIKDPL-DEHEAVVPGLLHKYTNRVLFIVRGGCAINCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + + A+ YI+ K +I EVIF+GGDPL+ + ++L ++ L Sbjct: 126 YCFRRHFPYQDNSN--NKHEWQQAIDYIRAKPEIIEVIFSGGDPLMANDEQLGWLVAQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ LR H+R+P+V P R+ EL+ LK++ + +H NHP E + E AA+++ Sbjct: 184 QIPHLKRLRIHTRLPVVMPTRVTDELVTLLKQSSLRCSVVLHINHPNELAAELPAALAKF 243 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AGI L +Q+VLL IND+ + L L + RI+PYYLH D G SHF + E+ Sbjct: 244 TTAGISLYNQAVLLADINDNADDLVELHERLFDNRIQPYYLHLLDKVEGASHFDVPEEKA 303 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 I+ L ++ G P + ++ G K I Sbjct: 304 VAIMNELLLRLPGFLVPKLVREIGGEKSKTPI 335 >gi|229844579|ref|ZP_04464719.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1] gi|229812828|gb|EEP48517.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1] Length = 338 Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust. Identities = 97/274 (35%), Positives = 136/274 (49%), Gaps = 2/274 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 I NP DP+ Q + E DP+ + N + + I+H+Y +R+L C Sbjct: 63 IEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCA 122 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V CR+CFRR + + K + AL YI +I EVIF+GGDPL+ L ++ Sbjct: 123 VNCRYCFRRHFPYDENPG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLI 180 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 K L I H+Q LR H+R+P+V PQRI E L E + H NHP E + A Sbjct: 181 KHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHA 240 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L + LL+QSVLLK +NDD +IL L + I PYYLH D G SHF ++ Sbjct: 241 MQKLNAVNVTLLNQSVLLKDVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLIS 300 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 E +I +L+ SG P ++ G K Sbjct: 301 DIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 334 >gi|163802718|ref|ZP_02196608.1| chaperonin GroEL [Vibrio sp. AND4] gi|159173425|gb|EDP58247.1| chaperonin GroEL [Vibrio sp. AND4] Length = 340 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 86/274 (31%), Positives = 147/274 (53%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ +P EE + DP+ D + + G++H+Y +R L+ + C + CR Sbjct: 67 NPHDPLLRQVLPLSEEFEVHQGYSADPL-DEQGNAIPGLLHKYKNRALMIVKGGCAINCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CF R KG S + +L Y+ + +I EVI +GGDPL+ ++ +++ + Sbjct: 126 YCFSRHFPYQDNKG---SKSVWQTSLDYVSQHPEINEVILSGGDPLMAKDSEIEWLIQAI 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 +I H++ LR HSR+P+V P RI +L L+ + + + H NH E + E A +++ Sbjct: 183 EHIPHIKRLRIHSRLPVVIPARITDQLSHLLQASRLQIVLVTHINHADEINAELTAKMAK 242 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G+ LL+Q+VLLK +ND E L + I PYYLH D G +H+ ++ + Sbjct: 243 LKQVGVTLLNQAVLLKDVNDSVEAQVTLNEALFDAGILPYYLHVLDKVQGAAHYFVSDTQ 302 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 ++I+ + ++SG P ++ G K +D Sbjct: 303 AKEIMRGVITRVSGYLVPKLTREIGGRPSKTPLD 336 >gi|307245529|ref|ZP_07527616.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254485|ref|ZP_07536321.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258943|ref|ZP_07540674.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853588|gb|EFM85806.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862535|gb|EFM94493.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866967|gb|EFM98824.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 333 Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust. Identities = 91/261 (34%), Positives = 138/261 (52%), Gaps = 11/261 (4%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + NDP+ Q + EE + +DP+ + HSP I+H+Y +R+L + + C + CR Sbjct: 64 DKNDPLFLQAMSAAEEFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCR 122 Query: 111 FCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 +CFRR V S K + L YI +++ EVIF+GGDPL+ L ++ Sbjct: 123 YCFRRHFPYDEVKSGKAV------WQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLI 176 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 L I H++ LR H+R+P+V P RI +L L ++ V + H NHP E E Sbjct: 177 SALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADK 236 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 +++L + ++LL+QSVLLKG+ND+ +IL L E + PYYLH D G SHF + Sbjct: 237 LNQLRQSKVVLLNQSVLLKGVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIE 296 Query: 287 IEEGQKIVASLKEKISGLCQP 307 + +I L+ SG P Sbjct: 297 DRQAAEIYKELQRITSGYLVP 317 >gi|77359438|ref|YP_339013.1| lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis TAC125] gi|76874349|emb|CAI85570.1| putative lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis TAC125] Length = 308 Score = 159 bits (401), Expect = 7e-37, Method: Compositional matrix adjust. Identities = 89/274 (32%), Positives = 143/274 (52%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 + NDP+ Q +P+ +E +DP+ + +N P G++H+Y R+L+ C V C Sbjct: 35 DANDPLLLQVMPRHQEFLTKSGFNKDPLLEQSNQQP--GLLHKYKSRVLVMFKTGCAVNC 92 Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 R+CFRR + L+ + AL+YI+ + I EVI +GGDPL+ + L L Sbjct: 93 RYCFRRHFPYQENQ--LNKRSLLDALSYIKSDNNINEVILSGGDPLMAKDDAISWFLDEL 150 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 + ++ +R H+R+P+V P RI EL + L + + H NH E ++ AA+ + Sbjct: 151 EQLPQIKRMRIHTRLPVVIPARITDELCERLARSPLKIVFVNHINHANEIDDDFKAAMQK 210 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L G++L +Q+V+LK +ND NL + + PYYLH D G SHF ++ E+ Sbjct: 211 LKQVGVVLFNQAVILKDVNDTTAAQVNLSEALFDADVLPYYLHLLDKVEGASHFDISEEQ 270 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 KI+A L E + G P + ++ G K ID Sbjct: 271 AIKIMAELLEALPGFLVPKLVREIGGEKSKTPID 304 >gi|119469128|ref|ZP_01612112.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7] gi|119447380|gb|EAW28648.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7] Length = 337 Score = 158 bits (400), Expect = 9e-37, Method: Compositional matrix adjust. Identities = 93/274 (33%), Positives = 145/274 (52%), Gaps = 5/274 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 + NDP+ Q +P+ +E +DP+ + +N P GI+H+Y R+L+ C V C Sbjct: 64 DANDPLLLQVMPRHQEFLKKSGFNKDPLLEQDNDQP--GILHKYKSRVLVMFKTGCAVNC 121 Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 R+CFRR + L+ K AL YI+ + I EVI +GGDPL+ + L L Sbjct: 122 RYCFRRHFPYQENQ--LNKKSLLDALCYIKSDTNINEVILSGGDPLMAKDDAISWFLDEL 179 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 + ++ +R HSR+P+V P RI EL L+++ + H NH E E AA+ + Sbjct: 180 EKLPQIKRMRIHSRLPVVIPARITDELCARLQKSPLKIVFINHINHANEIDGEFKAAMQK 239 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L +AG++LL+Q+V+LK +ND + NL + + PYYL+ D G SHF + E+ Sbjct: 240 LKHAGVMLLNQAVILKDVNDTVDAQVNLSEALFDADVLPYYLYLLDKVEGASHFDINEEQ 299 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 KI+A L + + G P + ++ G K ID Sbjct: 300 AIKIMAELLKALPGFLVPKLVREIGGQKSKTPID 333 >gi|303250421|ref|ZP_07336619.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252226|ref|ZP_07534123.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307261137|ref|ZP_07542814.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|302650747|gb|EFL80905.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860148|gb|EFM92164.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306869167|gb|EFN00967.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 333 Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 92/277 (33%), Positives = 142/277 (51%), Gaps = 11/277 (3%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A + + NDP+ Q + E +DP+ + HSP I+H+Y Sbjct: 48 FALRVPRAFAAKMQKGDKNDPLFLQAMSAAAEFLQAEGFVKDPL-EEQHSPAPNILHKYH 106 Query: 95 DRILLKLLHVCPVYCRFCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 +R+L + + C + CR+CFRR V S K + L YI +++ EVIF+ Sbjct: 107 NRLLFMIKNSCAINCRYCFRRHFPYDDVKSGKAV------WQQGLDYIAAHTELEEVIFS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ L ++ L I H++ LR H+R+P+V P RI +L L ++ V + Sbjct: 161 GGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 H NHP E E +++L A ++LL+QSVLLKG+ND+ +IL L E + PYY Sbjct: 221 THINHPNEVDEVLADKLNQLRQANVVLLNQSVLLKGVNDNAQILKALSNKLFESGVLPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 LH D G SHF + + +I L+ SG P Sbjct: 281 LHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYLVP 317 >gi|148652299|ref|YP_001279392.1| lysine 2,3-aminomutase YodO family protein [Psychrobacter sp. PRwf-1] gi|148571383|gb|ABQ93442.1| L-lysine 2,3-aminomutase [Psychrobacter sp. PRwf-1] Length = 372 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 83/276 (30%), Positives = 144/276 (52%), Gaps = 2/276 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + NDP+ Q +P K+E + DP+ +N H+P+KG++H+Y R+L+ + C ++CR Sbjct: 92 DANDPLLLQVLPNKQEQTQVTGYVSDPLAENAHNPIKGLLHKYRSRVLVTVTGACAIHCR 151 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFR+ + + S YI++ +I EVI +GGDPL ++++RL L+ L Sbjct: 152 YCFRQHF--DYQANLPKSDQLRLIQDYIRQHPEINEVILSGGDPLSVTNRRLFLWLQALE 209 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 + + +R H+R+ IV P R++ EL+ L+ + + + +H NH E + Sbjct: 210 DLPQINTIRLHTRLSIVIPDRLDNELLDRLEHSRCRIVMVVHTNHANEIDNHTAKLLQHA 269 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 GI LL+Q+VLL G+ND + L E + PYYLH D AG +HF + ++ Sbjct: 270 RQKGITLLNQTVLLAGVNDGLKQQVALSERLFEAGVLPYYLHLLDKVAGAAHFDIAQKQA 329 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 + + + G P + +LP K +D ++ Sbjct: 330 IDLYWQMLAHLPGYLVPKLVQELPHKPFKTPVDLYH 365 >gi|90407173|ref|ZP_01215361.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3] gi|90311749|gb|EAS39846.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3] Length = 338 Score = 157 bits (397), Expect = 2e-36, Method: Compositional matrix adjust. Identities = 91/270 (33%), Positives = 144/270 (53%), Gaps = 3/270 (1%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 NDP+ RQ +P +E + DP+ ++++S ++G++H+Y RILL L C V CR+C Sbjct: 69 NDPLLRQVLPITDEDKQVEGYSIDPLLEHDNS-IQGVLHKYKSRILLVLKSGCAVNCRYC 127 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR + L+ K + Y++ + EVI +GGDPL+ L V+ L+ + Sbjct: 128 FRRHF--PYQDNNLNKKQLAEVILYLKAHPDVNEVILSGGDPLMSKDDFLDYVINELQQL 185 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 K ++ LR H+R+P+V PQR+ L + LK V +H NH +E + A+ +L + Sbjct: 186 KQLKRLRIHTRLPVVIPQRVTDRLCEILKATRLQVVFVVHINHAHEIDKAFKIAMLKLHH 245 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AGI LL+QSVLL+G+ND+ E L L + I PYYL D G HF L ++ + Sbjct: 246 AGIQLLNQSVLLRGVNDNAEALVALSEALFDAHILPYYLFLLDKVQGAQHFDLEEQKAKA 305 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKI 322 ++ + + G P ++ G K I Sbjct: 306 LLLEISAALPGYLVPRLSREIAGEKSKTLI 335 >gi|219870442|ref|YP_002474817.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis SH0165] gi|219690646|gb|ACL31869.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis SH0165] Length = 337 Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 134/258 (51%), Gaps = 11/258 (4%) Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113 DP+ Q I +EE + +DP+ + HSP I+H+Y +R+L + + C + CR+CF Sbjct: 68 DPLFLQAITLQEEFTNVDGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCF 126 Query: 114 RREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 RR V S K T + +L YI+ S++ EVI +GGDPL+ + + L Sbjct: 127 RRHFPYDEVKSGKAT------WQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQL 180 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H+ +R HSR+P+V P RI EL + L ++ V + H NH E + + + Sbjct: 181 EQISHINTVRIHSRLPVVIPNRITDELCERLSQSRLKVVLVTHINHANEIDKIFAEKMQK 240 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + ++LL+QSVLLKGIND+ + L L I PYYLH D AG SHF + Sbjct: 241 LKQSNVVLLNQSVLLKGINDNAQTLKALSDKLFRYGILPYYLHLLDKVAGASHFYIEDSR 300 Query: 290 GQKIVASLKEKISGLCQP 307 +I L+ SG P Sbjct: 301 AFEIYRELQRITSGYLVP 318 >gi|332534315|ref|ZP_08410158.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas haloplanktis ANT/505] gi|332036225|gb|EGI72698.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas haloplanktis ANT/505] Length = 329 Score = 157 bits (396), Expect = 3e-36, Method: Compositional matrix adjust. Identities = 91/278 (32%), Positives = 144/278 (51%), Gaps = 5/278 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVC 105 I +PNDP+ Q +P+ +E +DP+ + +N P G++H+Y R+L+ C Sbjct: 52 IRKGDPNDPLLLQVMPRHQEFLTKSGFNKDPLLEQDNDQP--GLLHKYKSRVLVMFKTGC 109 Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 V CR+CFRR + L+ K L+YI+ S I EVI +GGDPL+ + Sbjct: 110 AVNCRYCFRRHFPYQENQ--LNKKSLLETLSYIKSDSNINEVILSGGDPLMAKDDAISWF 167 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA 225 L L + ++ +R HSR+P+V P R+ EL + L ++ + H NH E + A Sbjct: 168 LDELEQLPQIKRMRIHSRLPVVIPTRVTDELCERLAKSPLKIIFINHINHANEIDADFKA 227 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 A+ +L A + LL+Q+V+LK +ND + NL + + PYYL+ D G SHF + Sbjct: 228 AMQKLKQANVTLLNQAVILKDVNDTLDAQINLSEALFDADVLPYYLYLLDKVEGASHFDI 287 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 E+ KI+A L + + G P + ++ G K ID Sbjct: 288 NEEDAIKIMAELLKALPGFLVPKLVREIGGQKSKTPID 325 >gi|171680131|ref|XP_001905011.1| hypothetical protein [Podospora anserina S mat+] gi|170939692|emb|CAP64918.1| unnamed protein product [Podospora anserina S mat+] Length = 491 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 96/304 (31%), Positives = 157/304 (51%), Gaps = 22/304 (7%) Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91 +I +TP I + +N NP +DPI RQF+P K L +P+ + D + + SP+KG+VH Sbjct: 146 AIRMTPYILSRVNWENPRHDPIIRQFLPLKSVL--IPDHPKLALDSLHEEADSPVKGLVH 203 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIW 145 RY D+ L VCP YC FC R VG+ TV + + E A AYI+ + Sbjct: 204 RYSDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIENTPALQ 263 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCLKE 202 +++ +GGD L +L+ + L + +++ RF S+ V P RI E + L + Sbjct: 264 DIVVSGGDSYYLQPDQLRMIGDRLIGMPNIKRFRFASKGLAVAPSRILDESDGWVNALID 323 Query: 203 AGKPVYIA-------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 A H NHP E S + A +L G+++ +Q+VLL+G+NDD + ++ Sbjct: 324 ISNKAKKAGKAVAWHTHFNHPNEISWISKDASQKLFEEGVMVRNQTVLLRGVNDDVDTMS 383 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 L+R + ++ PYY++ D+ H R ++ + A ++ I+G P +++DLP Sbjct: 384 KLIRDLADNKVFPYYVYQCDMVERVEHLRTPLQTILDLEARIRGSIAGFMMPQFVVDLPA 443 Query: 316 GYGK 319 G GK Sbjct: 444 GGGK 447 >gi|167947045|ref|ZP_02534119.1| hypothetical protein Epers_11032 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 316 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 81/255 (31%), Positives = 149/255 (58%), Gaps = 8/255 (3%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI---LPEERED 76 + +++ + ++E+ + + + +L+N ++ NDPI + +P ++EL + + E +D Sbjct: 37 LSEDEEEVLREVVGQHPMNIPRYYLSLLNEYDTNDPIRKLALPSEDELIVAGSMGETTKD 96 Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 P GD+ H+ G++H+YP L+ C +YCR CFR+ +VG + ++ + A Sbjct: 97 PYGDDKHNKGNGVLHKYPYSALIVATDYCSMYCRHCFRKAIVGLPNDKTV--ENFQRAAT 154 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPE 195 YI+E +I VI +GGDPL+++ +R++K+L++L I HV +R +R P+V P R + + Sbjct: 155 YIREHKEITNVIISGGDPLLINTRRIKKILESLVDIDHVNYVRLGTRTPVVYPMRFFDDD 214 Query: 196 LIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L++C +E K +Y+ H NH E + A A+ R+ G+ + +Q+VLL+G+ND Sbjct: 215 LLKCFEEFNKHKTLYLPTHFNHANEITNIAKEAVLRIRQTGVTVNNQAVLLEGVNDSASD 274 Query: 254 LANLMRTFVELRIKP 268 + NLM V + KP Sbjct: 275 IENLMNGLVTIWRKP 289 >gi|307256695|ref|ZP_07538474.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864743|gb|EFM96647.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 333 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 90/261 (34%), Positives = 138/261 (52%), Gaps = 11/261 (4%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + NDP+ Q + EE + +DP+ + HSP I+H+Y +R+L + + C + CR Sbjct: 64 DKNDPLFLQAMSAAEEFLQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCR 122 Query: 111 FCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 +CFRR + V S K + L YI +++ EVIF+GGDPL+ L ++ Sbjct: 123 YCFRRHFPYDEVKSGKAV------WQQGLDYIAAHTELEEVIFSGGDPLMAKDNELDWLI 176 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 L I H++ LR H+R+P+V P RI +L L ++ V + H NHP E E Sbjct: 177 SALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADK 236 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 +++L A ++LL+QSVLLKG+ND+ + L L + + PYYLH D G SHF + Sbjct: 237 LNQLRQANVVLLNQSVLLKGVNDNAQTLKALSDKLFDSGVLPYYLHLLDRVEGASHFFIE 296 Query: 287 IEEGQKIVASLKEKISGLCQP 307 + +I L+ SG P Sbjct: 297 DRQAAEIYKELQRISSGYLVP 317 >gi|270157927|ref|ZP_06186584.1| KamA family protein [Legionella longbeachae D-4968] gi|289163802|ref|YP_003453940.1| lysine aminomutase [Legionella longbeachae NSW150] gi|269989952|gb|EEZ96206.1| KamA family protein [Legionella longbeachae D-4968] gi|288856975|emb|CBJ10789.1| putative lysine aminomutase [Legionella longbeachae NSW150] Length = 327 Score = 156 bits (395), Expect = 4e-36, Method: Compositional matrix adjust. Identities = 90/270 (33%), Positives = 141/270 (52%), Gaps = 2/270 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ Q + EL E DP+ +++++ ++G++H+Y R+LL + VC V CR Sbjct: 57 NPHDPLLLQVLASGYELQGSEEYSSDPLDEHSNNSVRGLLHKYHGRVLLTMTGVCAVNCR 116 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + + YI + + I EVI +GGDPL+ S L ++++ L Sbjct: 117 YCFRRHF--PYQANNPGRAGLKHICDYIAQDTSITEVILSGGDPLLASDVVLGELIEQLE 174 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H+ LR H+R+P+V P+RI+ L+ LK+ I +H NH E + + L Sbjct: 175 QIPHLHTLRIHTRIPVVFPERIDLNLLSLLKKVKLNKVIVLHCNHAQELDDSVRPVLHEL 234 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 LL+Q+VLL GIND+ +LA+L +T + PYYLH D G +HF L Sbjct: 235 RRIDCHLLNQTVLLAGINDNAHVLADLSQTLFSFGVLPYYLHVLDKVKGAAHFDLPFNTV 294 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKV 320 + I L+ + G P + + PG K Sbjct: 295 KGIYQQLQNLLPGYMLPRLVREEPGKSSKT 324 >gi|109896769|ref|YP_660024.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas atlantica T6c] gi|109699050|gb|ABG38970.1| L-lysine 2,3-aminomutase [Pseudoalteromonas atlantica T6c] Length = 341 Score = 156 bits (394), Expect = 5e-36, Method: Compositional matrix adjust. Identities = 95/283 (33%), Positives = 145/283 (51%), Gaps = 7/283 (2%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKL 101 A I +PND + +Q P ++E DP+ + N P G++H+Y R+LL + Sbjct: 59 FAARIKKGDPNDALFKQVFPSEKEFLTDLNYVLDPLQEQQNEKP--GVLHKYKSRVLLLV 116 Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C V CR+CFRR S L+ + + L YI++ I EVI++GGDPL+ Sbjct: 117 RGGCAVNCRYCFRRHFPYSDNH--LNKHEWQETLDYIKQDKNINEVIYSGGDPLMAKDDF 174 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL-KEAGKPVYIAIHANHPYEFS 220 L + + I H++ +R H+R+P+V P RI P+LI+ K KPV + +H NHP E Sbjct: 175 LAWLTDEIAEITHIKRIRIHTRLPVVIPARITPQLIEWFTKTRLKPVMV-LHINHPQEID 233 Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280 + L AG+ LL+Q VLLK IND ++ L + + PYYLH D G Sbjct: 234 FALQEVLQELTKAGVTLLNQGVLLKDINDSADVQVALSERLFDAGVMPYYLHVMDKVQGA 293 Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 HF + + I+A + +++ G P + ++ G GK ID Sbjct: 294 QHFDQDDKIAKDIMAKMIKRLPGFLVPKLVREIGGQPGKTPID 336 >gi|145631426|ref|ZP_01787196.1| DNA repair protein RecO [Haemophilus influenzae R3021] gi|144982963|gb|EDJ90472.1| DNA repair protein RecO [Haemophilus influenzae R3021] Length = 297 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 91/249 (36%), Positives = 128/249 (51%), Gaps = 2/249 (0%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +S+ + + I NP DP+ Q + E DP+ + N + + I+H+Y Sbjct: 51 FSLRVPQPFIDKIEKGNPQDPLFLQVMCSDLEFVQAEGFSTDPLEEKNANAVPNILHKYQ 110 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 +R+L C V CR+CFRR + + K + AL YI S+I EVIF+GGDP Sbjct: 111 NRLLFMAKGGCAVNCRYCFRRHFPYDENPG--NKKSWQLALDYIATHSEIEEVIFSGGDP 168 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+ L ++K L I H+Q LR H+R+P+V PQRI E L E+ + H N Sbjct: 169 LMAKDHELAWLIKHLENIPHLQRLRIHTRLPVVIPQRITDEFCTLLAESRLQTVMVTHIN 228 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 HP E + A+ +L + LL+QSVLLK +NDD +IL L + I PYYLH Sbjct: 229 HPNEIDQIFANAMQKLNAVNVTLLNQSVLLKSVNDDAQILKILSDKLFQTGILPYYLHLL 288 Query: 275 DLAAGTSHF 283 D G SHF Sbjct: 289 DKVQGASHF 297 >gi|167854986|ref|ZP_02477761.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755] gi|167853943|gb|EDS25182.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755] Length = 337 Score = 155 bits (393), Expect = 7e-36, Method: Compositional matrix adjust. Identities = 91/258 (35%), Positives = 134/258 (51%), Gaps = 11/258 (4%) Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113 DP+ Q I +EE + +DP+ + HSP I+H+Y +R+L + + C + CR+CF Sbjct: 68 DPLFLQAITLQEEFTNVDGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCF 126 Query: 114 RREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 RR V S K T + +L YI+ S++ EVI +GGDPL+ + + L Sbjct: 127 RRHFPYDEVKSGKAT------WQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQL 180 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 I H+ +R HSR+P+V P RI EL + L ++ V + H NH E + + + Sbjct: 181 EQISHINTVRIHSRLPVVIPNRITDELCERLLQSRLKVVLVTHINHANEIDDIFAEKMQK 240 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 L + ++LL+QSVLLKGIND+ + L L I PYYLH D AG SHF + Sbjct: 241 LKQSNVVLLNQSVLLKGINDNAQTLKALSDKLFRNGILPYYLHLLDKVAGASHFYIEDSR 300 Query: 290 GQKIVASLKEKISGLCQP 307 +I L+ SG P Sbjct: 301 AFEIYRELQRITSGYLVP 318 >gi|315125467|ref|YP_004067470.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913] gi|315013980|gb|ADT67318.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913] Length = 308 Score = 155 bits (392), Expect = 8e-36, Method: Compositional matrix adjust. Identities = 92/275 (33%), Positives = 140/275 (50%), Gaps = 7/275 (2%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPI--GDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108 + NDP+ Q +P+ +E +DP+ DNN G++H+Y R+L+ C V Sbjct: 35 DANDPLLLQVMPRHQEFLTKSGFNKDPLLEQDNNQP---GLLHKYKSRVLVMFKTGCAVN 91 Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 CR+CFRR + L+ + AL+YIQ I EVI +GGDPL+ + L Sbjct: 92 CRYCFRRHFPYQENQ--LNKRSLIDALSYIQADKNINEVILSGGDPLMAKDDAISWFLDE 149 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 L I ++ +R HSR+P+V P RI +L + L ++ V H NH E + A++ Sbjct: 150 LEQIPQIKRMRIHSRLPVVIPARITEQLCERLAKSPLKVIFVNHINHANEIDSDFKNAMN 209 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288 L A ++LL+Q+V+LK +ND + NL + + PYYLH D G SHF + Sbjct: 210 MLKQANVLLLNQAVILKDVNDTVDAQINLSEALFDTDVMPYYLHLLDKVEGASHFDIDEA 269 Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + KI+A L E + G P + ++ G K ID Sbjct: 270 QAIKIMAELLEALPGFLVPKLVREIGGQKSKTPID 304 >gi|240949712|ref|ZP_04754047.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305] gi|240295970|gb|EER46646.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305] Length = 333 Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust. Identities = 96/269 (35%), Positives = 135/269 (50%), Gaps = 11/269 (4%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 A + + NDP+ Q + E + +DP+ D HSP I+H+Y +R+L + Sbjct: 56 FAERMQKGDKNDPLFLQAMTSSAEFTQVEGFTKDPL-DEQHSPAPNILHKYHNRLLFMVK 114 Query: 103 HVCPVYCRFCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + C + CR+CFRR E V S K + +L YI E +I EVI +GGDPL+ Sbjct: 115 NSCAINCRYCFRRHFPYEDVKSGKSA------WQQSLQYIAEHPEIEEVILSGGDPLMAK 168 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 + L +L L I HV+ LR H+R+P+V P RI +L ++ V + H NH E Sbjct: 169 DEELDWILTALEKITHVKTLRIHTRLPVVIPNRITAQLCLRFADSRLNVVMVTHINHANE 228 Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278 I++L A +ILL+QSVLLKG+ND L L + I PYYLH D Sbjct: 229 IDAVLANKIAKLKQADVILLNQSVLLKGVNDSAITLKVLSDKLFSIGILPYYLHLLDKVE 288 Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQP 307 G SHF + E I L++ SG P Sbjct: 289 GASHFFVEDEIAFSIYKELQKISSGYLVP 317 >gi|124485170|ref|YP_001029786.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z] gi|124362711|gb|ABN06519.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z] Length = 368 Score = 154 bits (389), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 104/334 (31%), Positives = 168/334 (50%), Gaps = 15/334 (4%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 ++ K +TS L N + ++ + ++ +++ + +LI+ + DPI +P Sbjct: 1 MKPKYITSISALDNLVGLAPKEREMMERVTDVFPFRANDYYLSLIDWKDRRDPIRAIIVP 60 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-Q 121 EL DP + +++ G+ H+Y LL L VC CRFCFR+ + S + Sbjct: 61 DPRELE--SGGSNDPSCEKDYTKKPGLQHKYDQTGLLLLTDVCGGICRFCFRKRLFMSCE 118 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + TV +D +AYI+E ++I V+ TGGDPL L + L+ VL+ LR I HV I+R Sbjct: 119 RETV---RDVSENIAYIREHTEITNVLLTGGDPLTLDTRHLESVLRELREIPHVSIIRIG 175 Query: 182 SRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGII 236 S++ +P RI + EL+ L P +Y+ H NHP E ++ +I A L A +I Sbjct: 176 SKMLAYNPYRILNDAELLSVLSRYSTPEKRIYLMAHFNHPNEITDVSIQAAEALQKADVI 235 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 +++Q+ +L GIN + E L L R I PYY+ A G F++ +EE IV Sbjct: 236 VVNQTPILNGINAESETLTTLFRKLSFAGIAPYYVFQCRPATGNGLFQVPVEESYDIVQG 295 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI---DTHNI 327 + SGL + + + GKV++ D NI Sbjct: 296 AWKNCSGLAKRARFI-MSHSTGKVEVVGKDAENI 328 >gi|53729180|ref|ZP_00134024.2| COG1509: Lysine 2,3-aminomutase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208156|ref|YP_001053381.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae L20] gi|190149985|ref|YP_001968510.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252405|ref|ZP_07338571.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247647|ref|ZP_07529688.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307263313|ref|ZP_07544931.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126096948|gb|ABN73776.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189915116|gb|ACE61368.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648864|gb|EFL79054.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855815|gb|EFM87977.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306871375|gb|EFN03101.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 333 Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust. Identities = 90/277 (32%), Positives = 142/277 (51%), Gaps = 11/277 (3%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A + + NDP+ Q + E +DP+ + HSP I+H+Y Sbjct: 48 FALRVPRAFAAKMQKGDKNDPLFLQAMSAAAEFLQAEGFVKDPL-EEQHSPAPNILHKYH 106 Query: 95 DRILLKLLHVCPVYCRFCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 +R+L + + C + CR+CFRR V S K + L YI +++ EVIF+ Sbjct: 107 NRLLFMIKNSCAINCRYCFRRHFPYDDVKSGKAV------WQQGLDYIAAHTELEEVIFS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ L ++ L I H++ LR H+R+P+V P RI +L L ++ V + Sbjct: 161 GGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 H NHP E E +++L A ++LL+QSVLLKG+ND+ + L L + + PYY Sbjct: 221 THINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLKGVNDNAQTLKVLSDKLFDSGVLPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 LH D G SHF + ++ +I L+ SG P Sbjct: 281 LHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYLVP 317 >gi|162450720|ref|YP_001613087.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56'] gi|161161302|emb|CAN92607.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56'] Length = 461 Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust. Identities = 94/303 (31%), Positives = 158/303 (52%), Gaps = 21/303 (6%) Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91 S+ ++P + +LI+ ++P DP+ QFIP LP+ + D + + +P+ G+ H Sbjct: 97 SVRVSPYMLSLIDWNDPYGDPLRTQFIPLASRF--LPDHPKLGLDSLHERADAPVPGLTH 154 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKSQIW 145 RY D+ L L CPVYCRFC R VG V + + + A AYI + ++ Sbjct: 155 RYADKALFLPLDTCPVYCRFCTRSYAVGIDTEEVEKTHFKVDEERWKRAYAYIASRPELE 214 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL--- 200 +++ +GGD L ++L + +TL + ++Q +R ++ P V PQ+I + E I + Sbjct: 215 DIVVSGGDAYNLRPEQLGAIGETLLRMPNIQRIRLATKGPAVMPQKILTDDEWIDAVTRT 274 Query: 201 ----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 ++ K V I H NHP E + A+++L GI + +QSVL +G+ND PE + Sbjct: 275 VELGRKLHKEVVIHTHFNHPNEITGVTRDAMNKLFERGITVRNQSVLQRGVNDTPETMKL 334 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L++ + + PYY++ DL G R T+ G I ++ +G P +++D PGG Sbjct: 335 LVKRLGHVHVHPYYVYIHDLVRGVEDLRTTLATGLTIEKHVRGSTAGFNTPTFVVDAPGG 394 Query: 317 YGK 319 GK Sbjct: 395 GGK 397 >gi|165976091|ref|YP_001651684.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876192|gb|ABY69240.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 333 Score = 153 bits (386), Expect = 4e-35, Method: Compositional matrix adjust. Identities = 90/277 (32%), Positives = 142/277 (51%), Gaps = 11/277 (3%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +++ + A + + NDP+ Q + E +DP+ + HSP I+H+Y Sbjct: 48 FALRVPRAFAAKMQKGDKNDPLFLQAMSAAAEFLQAEGFVKDPL-EEQHSPAPNILHKYH 106 Query: 95 DRILLKLLHVCPVYCRFCFRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 +R+L + + C + CR+CFRR V S K + L YI +++ EVIF+ Sbjct: 107 NRLLFMIKNSCAINCRYCFRRHFPYDDVKSGKAV------WQQGLDYIAAHTELEEVIFS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ L ++ L I H++ LR H+R+P+V P RI +L L ++ V + Sbjct: 161 GGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLPVVIPSRITEQLCDRLSKSRLKVVMV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 H NHP E E +++L A ++LL+QSVLLKG+ND+ + L L + + PYY Sbjct: 221 THINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLKGVNDNVQTLKVLSDKLFDSGVLPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 LH D G SHF + ++ +I L+ SG P Sbjct: 281 LHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYLVP 317 >gi|256827853|ref|YP_003156581.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium baculatum DSM 4028] gi|256577029|gb|ACU88165.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium baculatum DSM 4028] Length = 520 Score = 152 bits (385), Expect = 5e-35, Method: Compositional matrix adjust. Identities = 103/339 (30%), Positives = 170/339 (50%), Gaps = 18/339 (5%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QLRH + + L + + I+++ ++ Y + LTP A+LI P NDP+ Q + Sbjct: 158 QLRH-AIEDVETLSKVVDLPAKAIEDVLRVTRTYRMRLTPYYASLILPGQVNDPVLLQAV 216 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E ++ E P +HSP + I YP + +K ++C +YC C R +G+ Sbjct: 217 PTGEMVD--NAGVEIPPVAADHSPARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIGA- 273 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 K + + AL YI+ +I +V+ TGGD L+L + L+ +L L I+HV++ R Sbjct: 274 KDRLYGKEAYGEALEYIRANPEIRDVLITGGDSLVLPNSMLEWLLGQLDAIEHVRMKRLG 333 Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +R+P+ PQRI+ EL+ L+ + KP+ + N E + + AA ++ +++ Sbjct: 334 TRIPVTTPQRIDSELLDILEASSDKKPLRVVTQINTAQEITPVSKAAFQAISKRVAAVMN 393 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYL-----HHPDLAAGTSHFRLTIEEGQKIV 294 Q+VLLKGIND + L T E ++PYY+ +P H R+ + GQ I+ Sbjct: 394 QAVLLKGINDSSVKMWKLCETIQEAYVRPYYVFNCSYRNPQF----KHLRVPVAVGQSII 449 Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 S+ ISG P YI GK+ + N+ + G G Sbjct: 450 ESMYGNISGDAIPRYI---ATAGGKIPLHRTNVLEHGQG 485 >gi|291280226|ref|YP_003497061.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1] gi|290754928|dbj|BAI81305.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1] Length = 519 Score = 152 bits (385), Expect = 6e-35, Method: Compositional matrix adjust. Identities = 98/301 (32%), Positives = 158/301 (52%), Gaps = 20/301 (6%) Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84 I ++ ++ HY + LTP A+LI P N NDP+ Q +P E ++ + E P +HS Sbjct: 177 ITDVLRVTKHYRMRLTPYYASLIMPGNINDPVLLQSVPTGEMVDNVGVEI--PPVAADHS 234 Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 P + I YP + +K ++C +YC C R +G +K + + K AL YI+ I Sbjct: 235 PARLIDQFYPRVVTIKSTNMCAMYCTHCLRIAHIG-KKDRIYNKKAYLEALEYIKNNKNI 293 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 +V+ TGGD +L + ++ +L+ L I HV++ R +R+P+ PQR++ EL+ L+E+ Sbjct: 294 RDVLVTGGDAFVLPNSLIRWILEELDKIDHVKMKRLGTRIPVTTPQRVDQELLDILEESN 353 Query: 205 --KPVYIAIHANHPYE---FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 KP+ + N E S+E IS+ +A +L+Q+VLL+GIND + L Sbjct: 354 DKKPLRVVTQINTAQEITPISKEVFKQISKRVSA---VLNQAVLLRGINDSKVKMWKLCE 410 Query: 260 TFVELRIKPYYL-----HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 T E ++PYY+ +P A H R+ ++ GQ I+ + ISG P YI Sbjct: 411 TIQEAYVRPYYVFNCSYRNPQFA----HMRVPVQVGQDIIEGMYGNISGDAIPRYIATAG 466 Query: 315 G 315 G Sbjct: 467 G 467 >gi|83648059|ref|YP_436494.1| lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396] gi|83636102|gb|ABC32069.1| Lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396] Length = 348 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 88/272 (32%), Positives = 141/272 (51%), Gaps = 2/272 (0%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P+DP+ Q +P E + DP+ + +++ KGI+ +Y R LL C ++CR Sbjct: 77 DPSDPLLLQVLPLHLEQQEMIGYSADPLSEADYTASKGILQKYHGRALLITTSACAIHCR 136 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR S+ S + ALA + + E+I +GGDPL+L++ L ++L + Sbjct: 137 YCFRRHFPYSEHRQ--SRAQWKEALATLPGDGGVSEIILSGGDPLMLNNPVLDELLTLIA 194 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 + + +R H+R+PI+ P RI+ L+ L + IHANH E A++RL Sbjct: 195 ELPQISKVRLHTRLPIMLPDRIDQGLLDLLSNRPFKTIMVIHANHGAELDASVEKALARL 254 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 ++L+Q+VLLKG+NDD LA L E + PYYLH D G +HF E Sbjct: 255 RPVVHMMLNQTVLLKGVNDDSSTLAALSERLFECGVTPYYLHQLDKVQGAAHFDCGDERL 314 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 ++ +L+ K+ G P + ++PG K I Sbjct: 315 SSLMQALRAKLPGYLVPRLVREIPGAPSKTPI 346 >gi|223041468|ref|ZP_03611671.1| hypothetical protein AM202_0087 [Actinobacillus minor 202] gi|223017726|gb|EEF16133.1| hypothetical protein AM202_0087 [Actinobacillus minor 202] Length = 333 Score = 152 bits (384), Expect = 7e-35, Method: Compositional matrix adjust. Identities = 92/261 (35%), Positives = 133/261 (50%), Gaps = 11/261 (4%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + NDP+ Q + E + +DP+ + HSP I+H+Y +R+L + + C + CR Sbjct: 64 DKNDPLFLQAMTSSSEFTQVEGFIKDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCR 122 Query: 111 FCFRR----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 +CFRR E V S K + +L YI E +I EVI +GGDPL+ + L +L Sbjct: 123 YCFRRHFPYEDVKSGKTV------WQQSLQYIAEHPEIEEVILSGGDPLMAKDEELDWIL 176 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 L I HV+ LR H+R+P+V P RI +L ++ V + H NH E Sbjct: 177 TALEKINHVKTLRIHTRLPVVIPNRITSQLCLRFADSRLNVVMVTHINHANEIDTVLANK 236 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 ++ L +G++LL+QSVLLKG+ND L L + I PYYLH D G SHF + Sbjct: 237 MAELKQSGVVLLNQSVLLKGVNDSAITLKALSDKLFSIGILPYYLHLLDKVEGASHFFVE 296 Query: 287 IEEGQKIVASLKEKISGLCQP 307 E I L++ SG P Sbjct: 297 DEVAFSIYKELQKISSGYLVP 317 >gi|298528426|ref|ZP_07015830.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512078|gb|EFI35980.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 521 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 98/298 (32%), Positives = 158/298 (53%), Gaps = 14/298 (4%) Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84 ++E+ ++ Y + LTP A LI P + +DP+ Q +P E ++ E P +HS Sbjct: 180 LEEVGRVTKDYRMRLTPYYAGLIMPESLDDPVLLQSVPTGEMVDNAGVEM--PPVAADHS 237 Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 P + I YP + +K ++C +YC C R +G +K + + AL YI+ +I Sbjct: 238 PARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIG-KKDRIYPEQAYSEALDYIRRDRRI 296 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 +V+ TGGD +L K L+ +L L ++HV+I R +R+P+ PQR++ EL+ L+E+ Sbjct: 297 RDVLITGGDAFMLPDKVLRYMLSELDGMEHVRIKRLGTRIPVTTPQRVDQELLDILEESN 356 Query: 205 --KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 KPV + N E + + A R++ A +L+Q+VLLKGIND +A+L T Sbjct: 357 DKKPVRVVTQINTAQEITPVSREAFRRISKAVSAVLNQAVLLKGINDSFVKMAHLCETIQ 416 Query: 263 ELRIKPYYL-----HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 E ++PYY+ +P SH R+ +E+G+ IV + ISG P YI G Sbjct: 417 EAYVRPYYIFNCSYRNPQF----SHLRVPVEKGRDIVEGMYGNISGDAIPRYIATAGG 470 >gi|262193506|ref|YP_003264715.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum DSM 14365] gi|262076853|gb|ACY12822.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum DSM 14365] Length = 473 Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust. Identities = 93/308 (30%), Positives = 163/308 (52%), Gaps = 17/308 (5%) Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNIL-PEEREDPIGDNNHSPLKGIVHRY 93 S+ ++P + +LI+ +P DP+ QFIP L P+ D + + +P+ G+ HRY Sbjct: 95 SVRVSPYLLSLIDWDHPYEDPLRTQFIPLGSRLTQDHPKLSFDSLHEQADAPVPGLTHRY 154 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKD-TEAALAYIQEKSQIWEV 147 D+ L L CPVYCRFC R VG +K ++ + +D + A Y+ + ++ ++ Sbjct: 155 VDKALFLTLDTCPVYCRFCTRSYAVGIDTEDVEKVSLKAREDRWDQAFRYVAARPELEDI 214 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK---E 202 + +GGD L ++++ + +TL + +++ +RF ++ P V PQ++ + E + L E Sbjct: 215 VISGGDSYQLKARQIRHIGETLLGMDNIRRIRFATKGPAVMPQKLITDTEWLDALTGIVE 274 Query: 203 AG----KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 G K V + H NHP E + A+ L GI + +QSVL +G+ND E + L+ Sbjct: 275 LGRKLHKEVALHTHFNHPNEITAITKQAMDILFERGITVRNQSVLQRGVNDTVETMQLLV 334 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318 + L ++PYY++ D+ G R TI+ G I ++ +G P +++D PGG G Sbjct: 335 KRLSYLNVQPYYVYMHDMVKGVEDLRTTIQTGLDIEKHVRGITAGFNTPTFVVDAPGGGG 394 Query: 319 KVKIDTHN 326 K I ++ Sbjct: 395 KRAIHSYE 402 >gi|298528428|ref|ZP_07015832.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512080|gb|EFI35982.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 370 Score = 150 bits (380), Expect = 2e-34, Method: Compositional matrix adjust. Identities = 89/286 (31%), Positives = 153/286 (53%), Gaps = 17/286 (5%) Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84 +D + SN Y ++L +N +P+DPI R IP +EL+ R D + ++S Sbjct: 28 MDTFEFRSNEYYLSL-------VNWDDPDDPIRRIIIPSVQELDQWG--RLDASNEQSYS 78 Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G+ H+Y + C +CR+CFR+ + + ++ VL+ D +AA Y++ + Sbjct: 79 VLPGLQHKYVSTAVFLASDACGGFCRYCFRKRLFIHPEQREVLT--DLDAACDYVRNHPE 136 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK 201 I V+ TGGD L+LS RL+K++ LR I HV+I+R +++ P R+ + EL++ +K Sbjct: 137 INNVLITGGDGLMLSTSRLEKIISRLRGIDHVKIIRIGTKLLSYSPYRVLNDQELLEMVK 196 Query: 202 EAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 + P +Y H HP E ++ ++ A RL AG IL +Q+ +L+G+NDDP++L L Sbjct: 197 KYSLPDKRIYFMTHYTHPREMTDVSLEACDRLIKAGGILCNQTPMLRGVNDDPQVLGELF 256 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 + + PYY+ G + + +EE + + + SGL Sbjct: 257 NRLSYMGVAPYYIFICRPTVGNKPYAVPVEEAFNVYQNARSMCSGL 302 >gi|293391874|ref|ZP_06636208.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952408|gb|EFE02527.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D7S-1] Length = 343 Score = 149 bits (377), Expect = 4e-34, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 134/259 (51%), Gaps = 5/259 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYC 109 N DP+ Q + +E +DP+ + + + + I+H+Y +R+L + C V C Sbjct: 71 NARDPLFLQVMSFADEFLQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNC 130 Query: 110 RFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 R+CFRR Q KG + ++ + AL YI +I EVI +GGDPL+ + ++K Sbjct: 131 RYCFRRHFPYDQNKG---NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKH 187 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 L + H+ LR HSR+P+V PQRI + L + + H NH E E+ A+ Sbjct: 188 LENLPHLTRLRIHSRLPVVIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMD 247 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288 +L N G++LL+QSVLLK +NDD IL L + I PYYLH D G +HF L Sbjct: 248 KLKNCGVVLLNQSVLLKNVNDDAHILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDA 307 Query: 289 EGQKIVASLKEKISGLCQP 307 + +I L+ SG P Sbjct: 308 QALRIYKQLQRITSGYLVP 326 >gi|261868588|ref|YP_003256510.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413920|gb|ACX83291.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D11S-1] Length = 343 Score = 149 bits (376), Expect = 6e-34, Method: Compositional matrix adjust. Identities = 90/259 (34%), Positives = 134/259 (51%), Gaps = 5/259 (1%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYC 109 N DP+ Q + +E +DP+ + + + + I+H+Y +R+L + C V C Sbjct: 71 NARDPLFLQVMSFADEFLQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNC 130 Query: 110 RFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 R+CFRR Q KG + ++ + AL YI +I EVI +GGDPL+ + ++K Sbjct: 131 RYCFRRHFPYDQNKG---NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKH 187 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 L + H+ LR HSR+P+V PQRI + L + + H NH E E+ A+ Sbjct: 188 LENLPHLTRLRIHSRLPVVIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMD 247 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288 +L N G++LL+QSVLLK +NDD IL L + I PYYLH D G +HF L Sbjct: 248 KLKNCGVVLLNQSVLLKNVNDDAHILKVLSDRLFSVGILPYYLHLLDKVEGAAHFYLDDA 307 Query: 289 EGQKIVASLKEKISGLCQP 307 + +I L+ SG P Sbjct: 308 QALRIYKQLQRITSGYLVP 326 >gi|158335745|ref|YP_001516917.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina MBIC11017] gi|158305986|gb|ABW27603.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina MBIC11017] Length = 379 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 91/297 (30%), Positives = 153/297 (51%), Gaps = 7/297 (2%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + +E D I H+ + A LI+ +P DP+ + +P E + D G Sbjct: 31 LGEEDCDRITAAQTHFPFMVPEGYAQLIDWQDPTDPLRQLLLPSVYEQD--DHGSLDTSG 88 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + + + G+ H+Y +L + C +CR+CFRR ++ T + +D + A+AYIQ Sbjct: 89 ETLSTVVPGLQHKYEQTAVLIVTQACAGHCRYCFRRRLMSKDVMTKETIEDLQGAIAYIQ 148 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELI 197 +I V+ +GGDP++ S +RL +L L I H+ +R +++P P R +PEL+ Sbjct: 149 THPEIDNVLMSGGDPMVSSTRRLANLLAALAEIPHLWQIRISTKLPAFLPSRFTSDPELL 208 Query: 198 QCLKEAGKPVYIAI--HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 Q L + + I H +HP E + A A++ L NAG +L +Q L++G+N +++ Sbjct: 209 QVLAQYQERFQIVFQCHFDHPREITPAAEQALAVLRNAGCLLTAQIPLMQGVNSSVDVME 268 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YIL 311 L + L + P YL HP HF+L I EG K+V L+++ +G + F YIL Sbjct: 269 TLFKRLHRLSVLPQYLFHPRPVKHALHFQLPILEGLKLVEGLRQRCNGSVKRFRYIL 325 >gi|307353177|ref|YP_003894228.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus petrolearius DSM 11571] gi|307156410|gb|ADN35790.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus petrolearius DSM 11571] Length = 358 Score = 147 bits (370), Expect = 3e-33, Method: Compositional matrix adjust. Identities = 86/284 (30%), Positives = 143/284 (50%), Gaps = 9/284 (3%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 ++ + N++ +LIN +P DPI + IP E+ + DP + ++ Sbjct: 24 LEAVENNFPFLANQYYLSLINWDDPEDPIKKIIIPNSAEM--VKWGSLDPSMEARNTKSP 81 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 G+ H+Y L+ + C +CRFCFR+ + + + +D + YI+ +I V Sbjct: 82 GLQHKYQATALMLISDNCGGFCRFCFRKRLFIKPEDEKI--RDLSTDIDYIRSHPEISNV 139 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-----LIQCLKE 202 + +GGD L++ RL K++ L IKHV+ +R +++P +P RI + +IQ Sbjct: 140 LLSGGDALMIPTSRLSKIVSALFSIKHVKSVRIGTKMPAYNPFRITGDESLQAMIQENSR 199 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 +GK +Y NHP E ++EA A+ L +G L +Q+ +L G+N+DPE L+ L Sbjct: 200 SGKMLYFMTQFNHPRELTKEAKEAMDLLRLSGASLANQTPILNGVNNDPETLSGLCSNLA 259 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 E PYYL AAG HF + +E +I K +SGL + Sbjct: 260 EAGNVPYYLFQCRPAAGNRHFTVPVENTYEIYEKAKRSLSGLAK 303 >gi|332975312|gb|EGK12210.1| hypothetical protein HMPREF9374_1621 [Desmospora sp. 8437] Length = 377 Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust. Identities = 90/307 (29%), Positives = 151/307 (49%), Gaps = 16/307 (5%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + + + + + ++ + ++P ++ L +DP+A+QFIP E E+ G Sbjct: 9 VHRTEREMVLDVIGKFRTKMSPALSRLAKQ---SDPVAKQFIPSPYEALDFGTEKPFEEG 65 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 NNH + G+ Y DR +L C YCR+CF++ + +S +D + A+ +I+ Sbjct: 66 KNNHG-IYGLERVYEDRAVLTPYFECSAYCRYCFKKSRTLAGSAKRMSDEDIDKAIRFIE 124 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 S+I V+ TGGDPL+ + L+KVL + I H++ +R +R + P+++ P+L + Sbjct: 125 SDSRIRTVLITGGDPLV-DPRLLEKVLDKVFPIPHIRNIRIGTRNILFSPEKVTPDLAKM 183 Query: 200 LKE----------AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 + K + I + NH E + E + A RL GI + Q VLLKGIND Sbjct: 184 IARYQQIDYDEPRKSKNISIGLSLNHVDELTPEVVRAYQRLIREGITVRGQVVLLKGIND 243 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309 + L+ TF+ I PYYL H G HFR ++++G ++ L SG Y Sbjct: 244 SVSAMRELLETFLCTGIVPYYLFHCMPVVGAKHFRTSVQKGLDLLQELS-PYSGTTTFQY 302 Query: 310 ILDLPGG 316 + P G Sbjct: 303 VYVTPIG 309 >gi|33152475|ref|NP_873828.1| hypothetical protein HD1410 [Haemophilus ducreyi 35000HP] gi|33148698|gb|AAP96217.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 330 Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust. Identities = 86/255 (33%), Positives = 136/255 (53%), Gaps = 5/255 (1%) Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113 DP+ Q + ++E +DP+ + +SP I+H+Y +R+L + + C + CR+CF Sbjct: 64 DPLFLQAMSLQDEFVQARGFSKDPLKEQ-YSPAPNILHKYQNRLLFMIKNSCAINCRYCF 122 Query: 114 RREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 RR ++ K L+ + LAYI + ++ EVIF+GGDP++ L +L + I Sbjct: 123 RRHFPYAEVKSGPLA---WQQGLAYIADYKELEEVIFSGGDPMMAKDNELAWLLTQIEQI 179 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H++ LR H+R+P+V P RIN +L L ++ + + H NH E + + IS L Sbjct: 180 PHIKTLRIHTRLPVVIPNRINRQLCDRLSKSPLNIVVVTHINHANELDDILASKISLLKQ 239 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 A + +L+Q+VLLKGIND+ + L L I PYYLH D G SHF + ++ Sbjct: 240 ANVTVLNQAVLLKGINDNAKTLKALNDKLFAAGILPYYLHLLDKVEGASHFFIDDQQALV 299 Query: 293 IVASLKEKISGLCQP 307 I L+ SG P Sbjct: 300 IYKELQRISSGYLVP 314 >gi|196234182|ref|ZP_03133014.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus Ellin428] gi|196221741|gb|EDY16279.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus Ellin428] Length = 456 Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust. Identities = 93/316 (29%), Positives = 158/316 (50%), Gaps = 19/316 (6%) Query: 26 DEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIP-QKEELNILPEEREDPIGDN 81 ++++ +H +AL +P + LI+ +P +DPI QF+P + ++ P + D + + Sbjct: 81 EDLQAALDHAPMALRISPYLLGLIDWRDPLHDPIRTQFLPLRSQQQPDHPLLQLDSLHEQ 140 Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAAL 135 SP+ G+ HRYPD+ L CPVYCRFC R VG+ V S E A Sbjct: 141 EDSPVPGLTHRYPDKALFLPQLSCPVYCRFCTRSYAVGNDTPEVEKLALTTSLARWEQAF 200 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--- 192 AYI + + +++ +GGD L LQ + + L + +++ +R+ ++ V PQ+I Sbjct: 201 AYIASQPDLEDIVISGGDSYNLKADHLQLIGERLLKMPNIRRIRYATKGLCVMPQKILSD 260 Query: 193 --NPELIQCLKEAG----KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 + + + E G K V + H NHP E + A++ L GI + Q+VL + Sbjct: 261 HAWTDALTRVAELGRSLHKDVVVHTHFNHPAEITSITQDAMNVLVERGIHVRCQTVLQRT 320 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDDP + L+R + + PYY++ D+ G R + QK+ ++ +G Sbjct: 321 VNDDPATMTQLVRRLSYVNVHPYYVYMHDMVPGVEDLRTPLATAQKLEKYVRGATAGFNT 380 Query: 307 PFYILDLPGGYGKVKI 322 P ++LD PGG GK + Sbjct: 381 PAFVLDAPGGGGKRDV 396 >gi|27383343|ref|NP_774872.1| hypothetical protein bll8232 [Bradyrhizobium japonicum USDA 110] gi|27356518|dbj|BAC53497.1| bll8232 [Bradyrhizobium japonicum USDA 110] Length = 499 Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust. Identities = 86/268 (32%), Positives = 138/268 (51%), Gaps = 18/268 (6%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 D G+++++ + G+ H+Y LL + C YCR+CFR+ +VG + + D Sbjct: 209 DTSGEHDNTVVPGLQHKYAQTGLLLVTDRCASYCRYCFRKRIVGKDSDEI--APDFARVA 266 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-- 193 YI ++ V+ +GGDP +LS +L K+L L I H++ +RF +++ P+R Sbjct: 267 QYIAGHPEMTNVLLSGGDPFVLSTAKLGKILDHLLPIPHLESIRFGTKIVAFAPRRFEDP 326 Query: 194 --PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 P L + + EAGK I H +H E S +A I L G+ L+QSVLL +NDDP Sbjct: 327 ALPALFRRISEAGKTAVIVAHFDHIGEISVDAERNIRALRAQGVQFLNQSVLLAKVNDDP 386 Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY-- 309 EILA ++ ++PYYL G SHF++++ G +I + ++SG+ + F Sbjct: 387 EILAATFAKCHQMGVRPYYLFQGRPVKGASHFQVSLRRGIEIARGINRRLSGIQKTFKYI 446 Query: 310 ---------ILDLPGGYGKVKIDTHNIK 328 +LDL G G+V + H K Sbjct: 447 MSHYTGKIEVLDL-GADGRVYMRYHQNK 473 >gi|325916984|ref|ZP_08179226.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937] gi|325536835|gb|EGD08589.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937] Length = 216 Score = 143 bits (361), Expect = 3e-32, Method: Compositional matrix adjust. Identities = 77/215 (35%), Positives = 119/215 (55%), Gaps = 2/215 (0%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C V+CR+CFRR +++ + + A+ I + I EV+ +GGDPL L+ +L + Sbjct: 1 CAVHCRYCFRRHFPYAEETA--AREGWREAVDAIAADADIDEVLLSGGDPLSLASPKLAE 58 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224 + L I H++ LR HSR+P+V P R++ L+ L+ PV IHANH EF + Sbjct: 59 LTDALAAIPHLKRLRIHSRLPVVLPARVDAPLLAWLRSLPWPVAFVIHANHANEFDADVD 118 Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284 A+ L + G+ LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF Sbjct: 119 TAMRALRDVGVQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFE 178 Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + + + A L ++SG P + ++PG GK Sbjct: 179 VDDARARALHAELATRLSGYLVPRLVREIPGDTGK 213 >gi|307133226|ref|YP_003885242.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937] gi|306530755|gb|ADN00686.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937] Length = 386 Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 89/295 (30%), Positives = 151/295 (51%), Gaps = 13/295 (4%) Query: 37 IALTPVIANLINPHNPND----PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV-H 91 + +TP ANLI D P+ RQ +P + + + E + +H I H Sbjct: 60 MQITPYYANLIRQAAYTDIVDNPLWRQVVPFWHDDGVTGYDGESENWELSHEMKTPICQH 119 Query: 92 RYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 +Y +R++L++++ C YC+FCF R V S+K K + +L YI++ ++ EVI Sbjct: 120 KYDNRVILRMVNTCNSYCQFCFEALRTLKVDSEKENA-GRKAFQDSLDYIRQTPEVEEVI 178 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 +GGDP++L+ +L + L +R I+ ++R HSR +P RI L+ L+ + Sbjct: 179 LSGGDPMMLTDAKLDECLGAIRNIRDSLLIRIHSRSLTFNPYRITDTLLDILQRHRVNAF 238 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 +H HP E S+ A+ R+ I+ S LL+G+ND+ E L +L + +KP Sbjct: 239 -GVHVCHPLELSDAFRDAVKRIQQVVPIVFSNMPLLRGVNDNEETLKSLFIELYRMGVKP 297 Query: 269 YYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 YYL+H + G S ++ +I + I+ LK ++S + P Y+ LP GK + Sbjct: 298 YYLYHFMPFSPGASEYKASIRDAIAIMNRLKRRVSNIALPEYV--LPHAKGKFTV 350 >gi|325122955|gb|ADY82478.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus PHEA-2] Length = 226 Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust. Identities = 77/216 (35%), Positives = 118/216 (54%), Gaps = 2/216 (0%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C V+CR+CFRR + + ++D YI+ I E+I +GGDPL LS+++L Sbjct: 5 CAVHCRYCFRRHF--PYQENLPKNEDWLNIKNYIEANPNINEIILSGGDPLTLSNRKLAL 62 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224 L+ L +K +QILR HSRVPIV P RI+ +LI LK + + + +H+NH E + Sbjct: 63 WLERLSSLKQIQILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLVVHSNHASELDDFTC 122 Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284 + + +L++ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF Sbjct: 123 SKLLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYLHVLDKVKGAQHFD 182 Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 L + I + + G P + ++ G K Sbjct: 183 LESSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKT 218 >gi|300722010|ref|YP_003711290.1| hypothetical protein XNC1_1003 [Xenorhabdus nematophila ATCC 19061] gi|297628507|emb|CBJ89074.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061] Length = 389 Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 88/276 (31%), Positives = 149/276 (53%), Gaps = 13/276 (4%) Query: 54 DPIARQFIP--QKEELNILPEERED-PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +P+ RQ +P +E+LN E E+ + + +P+ H+Y +R++L++++ C YC+ Sbjct: 84 NPLWRQVVPFWNEEKLNGYDGESENWELKEEMKTPI--CQHKYDNRVILRMVNACNSYCQ 141 Query: 111 FCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 FCF R V S K + +L YI+ + EVI +GGDPL+L+ +L + L Sbjct: 142 FCFEALRTLKVNSDKSNA-GRTSFQQSLEYIKNTPSVEEVILSGGDPLMLTDSKLDESLA 200 Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227 +R I+ ++R HSR +P RI L++ LK+ + +H HP+E SEE A+ Sbjct: 201 AIREIREDLLIRVHSRALTFNPYRITDALLEILKKH-RVNSFGVHICHPHELSEEFQHAV 259 Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLT 286 + + I+ S L+GIND+ EIL L + + +KPYYL+H + G+S ++ + Sbjct: 260 RCIQSVVPIVFSNMPFLRGINDNEEILHKLFISLYRIGVKPYYLYHFMPFSPGSSEYKAS 319 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 I + I+ LK ++S + P Y+ LP GK + Sbjct: 320 INDAIAIMGKLKRRVSNIALPEYV--LPHMKGKFTV 353 >gi|218661195|ref|ZP_03517125.1| hypothetical protein RetlI_17423 [Rhizobium etli IE4771] Length = 320 Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust. Identities = 80/242 (33%), Positives = 132/242 (54%), Gaps = 7/242 (2%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 D G++ ++ + G H+Y LL C YCR+CFR+ +VG + + + + + Sbjct: 51 DTSGEHENTVVPGFQHKYEQTGLLLATDRCASYCRYCFRKRIVGQESSEI--ANEFAQIV 108 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NP 194 YI ++ V+ +GGDP +L +L +L L H++ +RF +++ P+R +P Sbjct: 109 EYIGSHLEMTNVLISGGDPFVLRTGKLHGILDYLLPFTHLKSIRFGTKMLAYAPKRFEDP 168 Query: 195 EL---IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 EL Q + EAGK I H +H E S +A +I L + G+ L+QSVLL +NDDP Sbjct: 169 ELGALFQRIHEAGKTAVIVTHFDHIGEISLDAERSIQSLRSHGVQFLNQSVLLAKVNDDP 228 Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YI 310 EILA+ T ++ I PYYL G SHF++ ++ G +I + +++SG+ + F YI Sbjct: 229 EILASTFATCHQMGIHPYYLFQSRPVKGASHFQVPLDRGLEIAHGVSQRLSGVQKTFKYI 288 Query: 311 LD 312 + Sbjct: 289 MS 290 >gi|119946889|ref|YP_944569.1| lysine 2,3-aminomutase YodO family protein [Psychromonas ingrahamii 37] gi|119865493|gb|ABM04970.1| L-lysine 2,3-aminomutase [Psychromonas ingrahamii 37] Length = 337 Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust. Identities = 91/272 (33%), Positives = 142/272 (52%), Gaps = 3/272 (1%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 NDP+ +Q +P ++E + DP+ ++N S L G++H+Y R+LL L C + CR+C Sbjct: 69 NDPLLQQVLPIEDEELVSEGYSTDPLEEHN-SALPGLLHKYQSRVLLILKSGCAINCRYC 127 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR + ++ K + + YI+ ++ EVI +GGDPL+ LQ V+ L + Sbjct: 128 FRRHF--PYQDNNINKKQLQEIITYIKSHPEVNEVILSGGDPLMSKDDFLQHVINELELL 185 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 ++ LR HSR+P+V P RI +L ++ V +H NH E + A+++L Sbjct: 186 PQLRRLRLHSRLPVVIPSRITDQLCHMFNKSRLNVVFVLHINHANEIDQIFKDAMNKLHQ 245 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 AG+ LL+QSVLLKGIND+ + L +L E I PYYL D G HF L + + Sbjct: 246 AGVQLLNQSVLLKGINDNSQALVDLSEALFEAHILPYYLFLLDKVQGAQHFDLPEQRAIQ 305 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 + + + G P ++ G K I T Sbjct: 306 LTQEMSAALPGYLVPRLSREIAGEKNKTLIAT 337 >gi|289524601|ref|ZP_06441455.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502159|gb|EFD23323.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 169 Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust. Identities = 68/169 (40%), Positives = 106/169 (62%), Gaps = 2/169 (1%) Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E N E+ DP+ ++ ++P+ G VHRYPDR +L + C +YCRFC RR G + Sbjct: 3 ERNTAVEDFHDPLAEDRYAPVPGFVHRYPDRGILLVTDQCSMYCRFCTRRRFAG-EIDRP 61 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 S ++ +AA+ YI++ + +++ TGGDPL + L+ +L++LR I HV+I+R +RVP Sbjct: 62 KSREEMQAAIDYIEKTEALRDILITGGDPLTMEDDNLEWLLRSLRRIPHVEIIRIGTRVP 121 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 V PQRI L+ LK+ P++I +H NHP E + + A++ LANAG Sbjct: 122 AVMPQRITNSLVTMLKKF-HPLWINVHFNHPKEITPHSARALNILANAG 169 >gi|107027427|ref|YP_624938.1| hypothetical protein Bcen_5091 [Burkholderia cenocepacia AU 1054] gi|116693862|ref|YP_839395.1| lysine 2,3-aminomutase YodO family protein [Burkholderia cenocepacia HI2424] gi|105896801|gb|ABF79965.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia AU 1054] gi|116651862|gb|ABK12502.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia HI2424] Length = 396 Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust. Identities = 82/237 (34%), Positives = 130/237 (54%), Gaps = 10/237 (4%) Query: 91 HRYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWE 146 H+Y +R++L++++ C YC+FCF R V S+K +S+DT ++AYI++ I E Sbjct: 129 HKYDNRVILRMVNTCNSYCQFCFEALRTLEVNSEKTN--ASRDTFGESVAYIKQNPAIEE 186 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 VI +GGDPL+LS +L + L LR + ++R HSR +P R+ +L+ L E + Sbjct: 187 VILSGGDPLMLSDAKLDEHLSALRDVGRDLLIRIHSRSLTFNPYRVTDQLVAML-ERHRV 245 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 +H HP E S A+ R+ +A I+ S L+GINDD E L L + Sbjct: 246 NAFGVHVCHPDELSPAFTDAVKRIRSAVPIVFSNMPFLRGINDDEETLHRLFIELYRRGV 305 Query: 267 KPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 KPYYL+H + G S ++ +I + +I+ LK ++S + P Y+ LP GK + Sbjct: 306 KPYYLYHFMPFSPGASVYKASIRDAIRIMNRLKRRVSNVAMPEYV--LPHAKGKFTV 360 >gi|71735715|ref|YP_276669.1| arginine aminomutase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556268|gb|AAZ35479.1| arginine aminomutase, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 385 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 90/276 (32%), Positives = 145/276 (52%), Gaps = 15/276 (5%) Query: 55 PIARQFIPQKEELNILPEEREDPIGDN---NHSPLKGIV-HRYPDRILLKLLHVCPVYCR 110 P+ RQ +P E N++ + D +N NH I H+Y +R++L++ + C YC+ Sbjct: 79 PLWRQVVPYWNE-NVMGDY--DGASENWELNHEMKTPICQHKYDNRVILRMTNTCNAYCQ 135 Query: 111 FCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 FCF + Q GT + +T+ L YI+ I EVI +GGDPL+LS ++L++ L Sbjct: 136 FCFE-ALRTLQVGTDKKNANTDLFLDSVEYIRNNPAIEEVILSGGDPLMLSDRKLEENLA 194 Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227 LR I+ ++R HSR +P R+ E + L + K +H HP E S + AI Sbjct: 195 ALRSIREDLLIRIHSRALSFNPFRVTDEFVAILAKY-KVNAFGVHVCHPLELSVDFERAI 253 Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLT 286 S++ A I+ S LL+G+ND+ + L L + +KPYYL+H + G S ++ + Sbjct: 254 SKIRIAVPIIFSNMPLLRGVNDNEKTLHRLFIDLYRMGVKPYYLYHFMPFSPGASEYKAS 313 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 I + I+ LK ++S + P Y+ LP GK + Sbjct: 314 ISQAIAIMNRLKRRVSNIALPEYV--LPHAQGKFTV 347 >gi|271498600|ref|YP_003331625.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii Ech586] gi|270342155|gb|ACZ74920.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii Ech586] Length = 386 Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust. Identities = 91/310 (29%), Positives = 153/310 (49%), Gaps = 17/310 (5%) Query: 26 DEIKEISNH----YSIALTPVIANLINPHN----PNDPIARQFIPQKEELNILPEEREDP 77 DEI + H + +TP ANLI ++P+ RQ +P + + E Sbjct: 45 DEIAQRITHNLASRKMQITPYYANLIKDAGYKNIVDNPLWRQVVPFWLDDGATGYDGESE 104 Query: 78 IGDNNHSPLKGIV-HRYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEA 133 + +H I H+Y +R++L++++ C YC+FCF R V S+K K + Sbjct: 105 NWELSHEMKTPICQHKYDNRVILRMVNTCNSYCQFCFEALRTLKVDSEKENA-GRKAFQD 163 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 +L YI+ + EVI +GGDP++L+ +L + L +R I+ ++R HSR +P RI Sbjct: 164 SLNYIRNTPGVEEVILSGGDPMMLTDVKLDECLGAIRNIRDSLLIRIHSRSLTFNPYRIT 223 Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L+ L+ + +H HP E S+ A+ R+ I+ S LL+G+ND+ + Sbjct: 224 DTLLDILRRHRVNAF-GVHVCHPLELSDAFRDAVKRIQQVVPIVFSNMPLLRGVNDNEDT 282 Query: 254 LANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 L L + +KPYYL+H + G S ++ +I + I+ LK ++S + P Y+ Sbjct: 283 LRQLFIELYRMGVKPYYLYHFMPFSPGASEYKASIRDAIAIMNRLKRRVSNIALPEYV-- 340 Query: 313 LPGGYGKVKI 322 LP GK + Sbjct: 341 LPHAKGKFTV 350 >gi|169608816|ref|XP_001797827.1| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15] gi|160701722|gb|EAT84959.2| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15] Length = 487 Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust. Identities = 92/316 (29%), Positives = 153/316 (48%), Gaps = 37/316 (11%) Query: 36 SIALTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +I +TP + + I+ +NP +DPI +QFIP + I D+ H L + Sbjct: 85 AIRITPHVLSRIDWNNPLDDPIRKQFIPLASCI----------IPDHEHLKLDSLEEEKD 134 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVL------SSKDTEAALAYIQEKSQIWEVI 148 +YCRFC R VG TV S E Y++ + +++ Sbjct: 135 S-----------LYCRFCTRSYAVGGGTDTVTKRPQKPSLTRWEKVFEYVENCKDLKDIV 183 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NP------ELIQC 199 +GGD L + L ++ + L ++ +++ +RF S+ V P RI +P EL Sbjct: 184 VSGGDAYYLQPEDLLRMGRRLLHMDNIERVRFASKGLAVAPGRICEGDPWTEALIELSNL 243 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 + GK V + H NHP E + A + L G+I+ +QSVLLKG+N+DP I+++L++ Sbjct: 244 GRSLGKQVCLHTHINHPREITWVTKTAANYLFKHGVIVRNQSVLLKGVNNDPVIMSDLIQ 303 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + I+PYY++ D+ G R ++E + L+ +SG P +++DLPGG GK Sbjct: 304 GLSSINIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKQLRGTLSGFMMPAFVIDLPGGGGK 363 Query: 320 VKIDTHNIKKVGNGSY 335 + T + G +Y Sbjct: 364 RLVSTMESYENGVATY 379 >gi|289671289|ref|ZP_06492364.1| lysine 2,3-aminomutase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 188 Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust. Identities = 70/185 (37%), Positives = 104/185 (56%) Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 +A I I EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV P+R++ Sbjct: 1 MAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDA 60 Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 L+ L++ PV +HANH EF AA+ L +AG LL+Q+VLL+G+ND + L Sbjct: 61 PLLAWLRQLPWPVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDAL 120 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 A L + PYYLH D AG +HF + + + L ++SG P + ++P Sbjct: 121 AALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIP 180 Query: 315 GGYGK 319 G GK Sbjct: 181 GDTGK 185 >gi|330003195|ref|ZP_08304561.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3] gi|328537036|gb|EGF63321.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3] Length = 195 Score = 129 bits (323), Expect = 9e-28, Method: Compositional matrix adjust. Identities = 71/189 (37%), Positives = 104/189 (55%) Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 + YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR HSR+PIV P RI Sbjct: 1 MDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRIHSRLPIVIPARITE 60 Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 L + + V + H NH E E AA++ L AG+ LL+QSVLL+G+ND+ + L Sbjct: 61 TLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTL 120 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 A+L + + PYYLH D G +HF ++ +E ++I+ L ISG P ++ Sbjct: 121 ADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTLISGYMVPKLAREIG 180 Query: 315 GGYGKVKID 323 G K +D Sbjct: 181 GEPSKTPLD 189 >gi|38567180|emb|CAE76473.1| related to L-lysine 2, 3-aminomutase [Neurospora crassa] Length = 519 Score = 126 bits (316), Expect = 5e-27, Method: Compositional matrix adjust. Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 48/298 (16%) Query: 36 SIALTPVIANLINPHNPN-DPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91 +I +TP I + IN +P DPIARQF+P K + LP+ + D + + SP+KG+ Sbjct: 202 AIRMTPYILSRINWLDPRHDPIARQFLPMKSIM--LPDHPKLTLDSLHETADSPVKGLAS 259 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 P R RR E A AYI+ + ++ +++ +G Sbjct: 260 LKPTR-----------------RR---------------WEEAFAYIESRPELQDIVVSG 287 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-------K 201 GD L ++L + + L + +++ RF S+ V P RI E + L K Sbjct: 288 GDSYYLQPEQLTLIGERLISLPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISNKAK 347 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 +AGK + + H N P E S + A +L G+++ +Q+VLL+G+NDD E ++ L+R Sbjct: 348 KAGKSMALHTHFNSPNEISWISSDASQKLFENGVMVRNQTVLLRGVNDDYETMSTLIRQL 407 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + I PYY++ DL H R ++ + A ++ I+G P +++DLPGG GK Sbjct: 408 ADNNITPYYVYQCDLVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGGK 465 >gi|85118412|ref|XP_965436.1| hypothetical protein NCU02663 [Neurospora crassa OR74A] gi|28927245|gb|EAA36200.1| conserved hypothetical protein [Neurospora crassa OR74A] Length = 492 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 48/298 (16%) Query: 36 SIALTPVIANLINPHNPN-DPIARQFIPQKEELNILPEERE---DPIGDNNHSPLKGIVH 91 +I +TP I + IN +P DPIARQF+P K + LP+ + D + + SP+KG+ Sbjct: 175 AIRMTPYILSRINWLDPRHDPIARQFLPMKSIM--LPDHPKLTLDSLHETADSPVKGLAS 232 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 P R RR E A AYI+ + ++ +++ +G Sbjct: 233 LKPTR-----------------RR---------------WEEAFAYIESRPELQDIVVSG 260 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-------K 201 GD L ++L + + L + +++ RF S+ V P RI E + L K Sbjct: 261 GDSYYLQPEQLTLIGERLISLPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISNKAK 320 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 +AGK + + H N P E S + A +L G+++ +Q+VLL+G+NDD E ++ L+R Sbjct: 321 KAGKSMALHTHFNSPNEISWISSDASQKLFENGVMVRNQTVLLRGVNDDYETMSTLIRQL 380 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + I PYY++ DL H R ++ + A ++ I+G P +++DLPGG GK Sbjct: 381 ADNNITPYYVYQCDLVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGGK 438 >gi|332827425|gb|EGK00177.1| hypothetical protein HMPREF9455_03509 [Dysgonomonas gadei ATCC BAA-286] Length = 444 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 80/266 (30%), Positives = 131/266 (49%), Gaps = 19/266 (7%) Query: 76 DPIGDNNHSP------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127 +P G ++ P LKGI H+YP+ +L C YC FCFR G + Sbjct: 109 NPAGQEHNVPSLGEIKLKGIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFA 168 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVP 185 K+ + L Y++ ++ +V+FTGGDP++++ L + L H++ +R ++ Sbjct: 169 MKEADLLLKYLRVHKEVTDVLFTGGDPMVMNAAILSSYINPLLTSDFDHIRSIRIGTKSL 228 Query: 186 IVDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIA-AISRLANAGII 236 P R + ++I+ +E +GK + I H NHP E S EA+ AI R+ + G Sbjct: 229 AYWPYRYLTDTDSDDIIRLFEEINKSGKNLSIQAHFNHPRELSTEAVKQAIMRIRSTGAQ 288 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 + +QS LLK IND PEI A + R V+L PYY+ +F L +E+ I Sbjct: 289 IRTQSPLLKHINDKPEIWAQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNIFRR 348 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322 +++SGLC+ + GK+++ Sbjct: 349 AYQQVSGLCRTVRGPSMSDHAGKIQV 374 >gi|332829850|gb|EGK02492.1| hypothetical protein HMPREF9455_01449 [Dysgonomonas gadei ATCC BAA-286] Length = 441 Score = 125 bits (315), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 75/266 (28%), Positives = 130/266 (48%), Gaps = 19/266 (7%) Query: 76 DPIGDNNHSP------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127 +P G ++ P LKGI H+YP+ +L C YC FCFR G + Sbjct: 106 NPAGQEHNVPYLGEIKLKGIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFA 165 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVP 185 K+ + Y++ ++ +++FTGGDP+I++ L+ ++ L H++ +R ++ Sbjct: 166 MKEADLLFKYLRLHKEVTDILFTGGDPMIMNASTLEAYIRPLLEPEFDHIRTIRIGTKSL 225 Query: 186 IVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGII 236 P R + L + + +GK + + H NHP E S EA+ AI+R+ + G Sbjct: 226 AYWPYRYLTDKDSDDIIRLFELVNRSGKSLSLQAHFNHPRELSTEAVKQAIARIRSTGSQ 285 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 + +QS LL+ IND PE+ A + R V+L PYY+ +F L +E+ +I Sbjct: 286 IRTQSPLLRNINDKPELWARMWRKQVDLGCIPYYMFIARDTGSKHYFELPLEKCWQIFRR 345 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322 ++SGLC+ + GK+++ Sbjct: 346 AYRQVSGLCRTVRGPSMSDHAGKIQV 371 >gi|332885734|gb|EGK05980.1| hypothetical protein HMPREF9456_02244 [Dysgonomonas mossii DSM 22836] Length = 444 Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust. Identities = 81/269 (30%), Positives = 131/269 (48%), Gaps = 13/269 (4%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGT 124 LN P +E + LKGI H+YP+ +L C YC FCFR Sbjct: 106 LNPNPAGQEHNVPSLGEVKLKGIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSEL 165 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHS 182 + K+ + L Y++ ++ +V+FTGGDP++++ L +K L H++ +R + Sbjct: 166 KFAMKEVDLLLKYLRVHKEVTDVLFTGGDPMVMNAAILSSYIKPLLTSDFDHIRSIRIGT 225 Query: 183 RVPIVDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIA-AISRLANA 233 + P R + ++I+ +E +GK + I H NHP E S +A+ AI R+ N Sbjct: 226 KSLAYWPYRYLTDSDSDDIIRLFEEINKSGKNLSIQAHFNHPRELSTDAVKQAILRIKNT 285 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 G + +QS LLK IND PEI A + R V+L PYY+ +F L +E+ I Sbjct: 286 GAQIRTQSPLLKHINDKPEIWAQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNI 345 Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKI 322 +++SGLC+ + GK+++ Sbjct: 346 FRRAYQQVSGLCRTVRGPSMSDHAGKIQV 374 >gi|163756014|ref|ZP_02163131.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1] gi|161324185|gb|EDP95517.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1] Length = 418 Score = 124 bits (311), Expect = 2e-26, Method: Compositional matrix adjust. Identities = 103/383 (26%), Positives = 166/383 (43%), Gaps = 54/383 (14%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHN-PNDPIARQ 59 + + TL + + + + +EQ++EIK +S+ Y V+ NLI+ +N PNDPI R Sbjct: 3 KFKSYTLNKLEKIPQLSGLSEEQMEEIKIVSSIYPFKTNNYVLENLIDWNNIPNDPIFRL 62 Query: 60 FIPQKEELNILPEERED---------------------------PIGDNN-------HSP 85 P KE L +PE E P G Sbjct: 63 NFPHKEML--IPEHFEQLKRVRATGTKEELKEVIYNIRMKLNPHPAGQKELNGAFLEEKK 120 Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L+GI H+Y D +L C YC FCFR + + SK+ + L Y+ E Q Sbjct: 121 LEGIQHKYKDILLFFPSQSQTCHAYCTFCFRWPQFINDLDFKIQSKEIDPLLKYLSENPQ 180 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-------- 195 I EV+FTGGDP+I++ + L ++ L + ++ +R ++ P + + Sbjct: 181 ITEVLFTGGDPMIMNSRVLDSYIEPLLKVDSIKTIRIGTKALSYWPYKFTTDEDAEGMLN 240 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEIL 254 +++ + +AGK + H NHP E + AI +L + G ++ +QS LL+ IN+D + Sbjct: 241 VLRKITKAGKHLGFMAHFNHPKELEPPVVKEAIDKLRSIGAVIRTQSPLLRFINNDAKTW 300 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 + V+L PYY+ P +F T+E K+ SGL + Sbjct: 301 TTMWEKQVQLGCIPYYMFLPRDTGAQHYFAETLENAHKLYTEAIRNCSGLASTAKGPVMS 360 Query: 315 GGYGKVKIDTHNIKKVGNGSYCI 337 +GKV+ I V N SY + Sbjct: 361 MTHGKVE-----ILGVKNNSYTL 378 >gi|56477547|ref|YP_159136.1| hypothetical protein ebA3745 [Aromatoleum aromaticum EbN1] gi|56313590|emb|CAI08235.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 462 Score = 122 bits (306), Expect = 8e-26, Method: Compositional matrix adjust. Identities = 77/256 (30%), Positives = 127/256 (49%), Gaps = 13/256 (5%) Query: 80 DNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 D + + L+GI H+Y + +L C YC FCFR K ++S + E AY Sbjct: 137 DEHGNRLEGIQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKELRIASSEAETLHAY 196 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI--- 192 ++ ++ +++FTGGDP+++ + L+ L+ L H+Q +R ++ P R Sbjct: 197 LRHHCEVTDLLFTGGDPMVMKTRHLRDYLEPLLKPEFDHIQTIRIGTKALTFWPHRFLGA 256 Query: 193 --NPELIQCLK---EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKG 246 ELI L+ EAGK V + H NH E EA AA+ RL AG+++ Q L+ Sbjct: 257 DDADELIALLERLTEAGKHVALMTHFNHWKELDTEATQAAVRRLRKAGVVIRGQGPLIAH 316 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDDP++ A + +T V L I PYY+ ++F + + +I +++SGL + Sbjct: 317 LNDDPDVWARMWKTQVRLGILPYYMFVERDTGARNYFEVPLVRAWEIYRDAMQQVSGLGR 376 Query: 307 PFYILDLPGGYGKVKI 322 + GKV+I Sbjct: 377 TARGPSMSASPGKVEI 392 >gi|58426924|gb|AAW75961.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 202 Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust. Identities = 64/174 (36%), Positives = 95/174 (54%) Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV P+R++ L+ L+ Sbjct: 26 EVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLLAWLRSLPW 85 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 P +HANH EF A+ L + G LL+Q+VLL G+ND + LA L Sbjct: 86 PAAFVLHANHANEFDSAVDMAMHALRDTGAQLLNQAVLLGGVNDSVDALAALSERSFAAG 145 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + PYYLH D AG +HF + + + L ++SG P + ++PG GK Sbjct: 146 VLPYYLHQLDRVAGVAHFEVDDARARALHTELATRLSGYLVPRLVREIPGDTGK 199 >gi|189500343|ref|YP_001959813.1| radical SAM domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189495784|gb|ACE04332.1| radical SAM domain protein [Chlorobium phaeobacteroides BS1] Length = 434 Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 93/352 (26%), Positives = 162/352 (46%), Gaps = 50/352 (14%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHN-PNDPIAR 58 ++ R T + L I +EQI +K ++ Y + V NLI+ N P DPI R Sbjct: 2 LKYRSYTADNLHTLPQYGEIPEEQIHIVKTVATVYPFRVNSYVTENLIDWSNIPEDPIFR 61 Query: 59 QFIPQKEELNILPEE---------------------RE-------DPIGDN-------NH 83 PQ+E LN PE+ RE +P G ++ Sbjct: 62 LSFPQEEMLN--PEDFQRMSGLVSTDAPQDIIRQAAREIQLLQNPNPAGQMELNTPLLDN 119 Query: 84 SPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 L GI H+Y + +L VC YC +CFR + ++ D L Y++E Sbjct: 120 EVLHGIQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLESLKFANNDITLLLDYLKEH 179 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE------ 195 ++ ++IFTGGDP+++S ++K ++ L I V+ +R ++ P R E Sbjct: 180 PEVKDIIFTGGDPMVMSTALIKKYIQPLLDIPTVKTIRIGTKALSWWPYRFTAEHDSDEI 239 Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 + + +GK + I H +HP E + +A+ AI+R+ + G ++ SQS +++ +NDD + Sbjct: 240 LSFFEQIVSSGKHLAIMAHISHPREIETSQAVDAINRIRSTGAVIRSQSPIVRHVNDDAD 299 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 I + + ++L I PYY+ +F + + E +I + +++SGL Sbjct: 300 IWEAMWQKQLQLGIIPYYMFLERDTGPKQYFEIPLSEAVEIFNTAYQRMSGL 351 >gi|193214957|ref|YP_001996156.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium ATCC 35110] gi|193088434|gb|ACF13709.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium ATCC 35110] Length = 465 Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 78/295 (26%), Positives = 141/295 (47%), Gaps = 14/295 (4%) Query: 42 VIANLINPHNPNDPIARQFIPQKEELNILPE-EREDPIGDNNHSPLKGIVHRYPDRILL- 99 ++ L+ + P +A+ +EELN P + E + N + G+ H+Y + L Sbjct: 97 IVQALLAENAPKSKLAKAINQIREELNPHPAGQLEFNVPKLNGQKIDGLQHKYNETALFF 156 Query: 100 -KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 C YC +CFR G +++ E +AY++ ++I +V+ TGGDPL +S Sbjct: 157 PSEGQSCHAYCTYCFRWPQFGENDDLKIATNQIENVIAYLKHHTEISDVLITGGDPLTMS 216 Query: 159 HKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EAGKPVY 208 K L K + L + H++ +R ++ P R + +L+ + +GK + Sbjct: 217 AKSLSKYVLALLSEDLPHIRTIRIGTKTLTYWPYRFLTEKDSEQLLDAFRMIVRSGKHLA 276 Query: 209 IAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 + H NHP E +A AI R+ G ++ +QS +++GINDD +I + L + V L + Sbjct: 277 LMTHFNHPVELETPEVAEAIQRIRETGAVIRTQSPIIRGINDDAKIWSALWKRQVSLGLV 336 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 PYY+ P FR+++ +I + +SG+C+ + GKV++ Sbjct: 337 PYYMFIPRDTGAQHFFRISLVRAWEIFKEAYQHVSGICRTVRGPSMSTNPGKVQV 391 >gi|323456908|gb|EGB12774.1| hypothetical protein AURANDRAFT_70598 [Aureococcus anophagefferens] Length = 1879 Score = 118 bits (296), Expect = 1e-24, Method: Composition-based stats. Identities = 74/259 (28%), Positives = 127/259 (49%), Gaps = 17/259 (6%) Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQ 121 +E LN P ++ + + L G+ H+Y + +L C YC +CFR Sbjct: 871 RESLNPHPAGQK-ALNAPKKAELTGVQHKYAETVLFFAAAAQTCHAYCTYCFRWAQFIGD 929 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR---YIKHVQIL 178 + KD ++ Y++E ++ +++FTGGDP+I+ + L++ L+ + ++ H++ L Sbjct: 930 PDLRFAQKDADSLFDYLEEHPEVSDILFTGGDPMIMQTRMLKQYLEPFKDPTHLPHIKNL 989 Query: 179 RFHSRVPIVDPQRINP-----ELIQCLKE----AGKPVYIAIHANHPYEFSEEAIA-AIS 228 R +R PQR EL+ L+E G+ + I H H E S + + AI Sbjct: 990 RIGTRALTFWPQRFTTDADADELMTLLREVKEIGGRHMAIMAHLGHVRELSTDKVKHAIH 1049 Query: 229 RLAN-AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287 RL G+I+ SQS +++GINDD ++ A R V L + PYY+ S+F + + Sbjct: 1050 RLKQEGGVIIRSQSPVMRGINDDADVWAAKWREEVRLGVIPYYMFIARDTGAQSYFDVPL 1109 Query: 288 EEGQKIVASLKEKISGLCQ 306 Q++ A SGLC+ Sbjct: 1110 VRAQRLYADAIRATSGLCR 1128 >gi|325279772|ref|YP_004252314.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712] gi|324311581|gb|ADY32134.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712] Length = 442 Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 74/250 (29%), Positives = 119/250 (47%), Gaps = 19/250 (7%) Query: 76 DPIGDNNHSP------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127 +P G +++ P LKGI H+Y + +L C YC FCFR + Sbjct: 106 NPAGQDHNVPMLGDIRLKGIQHKYRETVLFFPAQGQTCHAYCSFCFRWPQFSGMNELKFA 165 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVP 185 K+T+ L Y++ Q+ +V+FTGGDP+ +S L ++ L ++H++ +R S+ Sbjct: 166 MKETDLLLKYLRLHPQVTDVLFTGGDPMTMSASLLSAYIEPLLQPGLEHIRTIRIGSKAL 225 Query: 186 IVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGII 236 P R + L + + GK + H NHP E S A+ AI R+ N G Sbjct: 226 AYWPYRFISDVDAAEVLRLFEKVTATGKNLSFQAHFNHPVELSTAAVCEAIRRIRNTGAQ 285 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 + +QS LL+ IND PEI + R V+L PYY+ +F + +E+ I Sbjct: 286 IRTQSPLLRHINDSPEIWREMWRKQVDLSCIPYYMFVARDTGAKHYFEIPLEKCWDIFRK 345 Query: 297 LKEKISGLCQ 306 ++SG+C+ Sbjct: 346 AYSQVSGICR 355 >gi|290474686|ref|YP_003467566.1| Arginine aminomutase (fragment) [Xenorhabdus bovienii SS-2004] gi|289173999|emb|CBJ80786.1| Arginine aminomutase, putative (fragment) [Xenorhabdus bovienii SS-2004] Length = 244 Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 65/186 (34%), Positives = 105/186 (56%), Gaps = 2/186 (1%) Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 +S + EVI +GGDPL+L+ +L + L ++R I+ ++R HSR +P RI LI+ L Sbjct: 29 QSSVEEVILSGGDPLMLTDNKLNESLASIREIRDDLLIRIHSRALTFNPYRITDALIETL 88 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 K+ + +H HP+E SEE A+ R+ +A I+ S L+GIND+ + L L Sbjct: 89 KKYRINAF-GVHVCHPFELSEEFQTAVRRIQSAVPIVFSNMPFLRGINDNEKTLHKLFID 147 Query: 261 FVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + +KPYYL+H + G+S ++ +I + I++ LK +IS + P Y+L G Sbjct: 148 LYRMGVKPYYLYHFMPFSPGSSEYKASINDAISIMSKLKRRISNIALPEYVLPHMKGKFT 207 Query: 320 VKIDTH 325 V + TH Sbjct: 208 VPLFTH 213 >gi|111025433|ref|YP_707853.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1] gi|110824412|gb|ABG99695.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1] Length = 442 Score = 115 bits (287), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 93/377 (24%), Positives = 167/377 (44%), Gaps = 50/377 (13%) Query: 1 MQLRHKTLTSAQ--DLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHN-PNDPI 56 M+ R +T Q DL + +++ E++ ++N + V+ LI+ + P+DPI Sbjct: 1 MKNRMRTFRGVQLADLPQLDQFTEQERHEMRVVANLLPFRVNNYVLDELIDWSSAPDDPI 60 Query: 57 ARQFIPQKE---------------------ELNILPEE-RED----PIGDNNHS------ 84 R P +E +L + ++ R+D P G H+ Sbjct: 61 FRMTFPAREMVPPRIYDLVSDALSNGVDRKQLQAIAQKCRQDLNPHPSGQREHNVPLLDG 120 Query: 85 -PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 P+ G+ H+Y +L+ C YC +CFR ++ + Y++ Sbjct: 121 EPVAGLQHKYRQTLLVFPSQGQTCHSYCSYCFRWAQFVGDADLKFAAPGPGRMIDYLRGH 180 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINP----- 194 ++ +V+ TGGDPLI+S L + + L ++HV +R ++ + P R+ Sbjct: 181 REVTDVLLTGGDPLIMSTPVLARWVTPLLAPDLEHVTNIRIGTKALVQWPYRVTSGPDAD 240 Query: 195 ---ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDD 250 LI+ AGK V I +H +HP E +E A AA++RL +AG ++ +Q+ +++ +ND Sbjct: 241 ELLRLIEACTAAGKSVAIMLHVSHPRELENEAATAAVARLRSAGAVVRAQAPIIRHVNDS 300 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 P+ A + R V L I+PYY +S F + + I + +SGL + Sbjct: 301 PQAWATMWRHMVRLGIQPYYTFVERDTGASSFFEVPLARALTIYQEAQRVVSGLARTARG 360 Query: 311 LDLPGGYGKVKIDTHNI 327 + GK+ ID + Sbjct: 361 PVMSATPGKIAIDGETV 377 >gi|311695938|gb|ADP98811.1| lysine 2,3-aminomutase-like protein [marine bacterium HP15] Length = 454 Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 93/328 (28%), Positives = 144/328 (43%), Gaps = 47/328 (14%) Query: 42 VIANLINPHN-PNDPIARQFIPQK---------------------EELNILPEERED--- 76 VI LIN PNDPI + PQK +E+ + +E D Sbjct: 61 VINELINWDKVPNDPIYQLVFPQKGMLKEEHYERMATMHREGADKKEIQAVAKEIRDELN 120 Query: 77 --PIG-------DNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125 P G + + L G+ H+Y + +L C YC FCFR K Sbjct: 121 PHPAGQMEMNMPELDGEVLDGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLK 180 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSR 183 ++S + E Y+QE +++ +++ TGGDP+++ K L + L+ L H+Q +R ++ Sbjct: 181 MASTEAEKLHGYLQEHTEVTDLLVTGGDPMVMKTKNLVQYLEPLLEPEFDHIQTIRIGTK 240 Query: 184 VPIVDPQRINP--------ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234 P R +L L +AGK V I H NH E + E A AI R+ G Sbjct: 241 ALTFWPYRFVTDKDADELIDLFARLVDAGKHVAIMAHYNHWQEITTEIAEEAIRRIRATG 300 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 + +Q L+K +NDD + A L + V+L I PYY+ ++F + + E I Sbjct: 301 AEIRAQGPLIKHVNDDADAWAKLWKKEVQLGIIPYYMFVERDTGAKNYFEVPLAEAFHIY 360 Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKI 322 +K+SGL + + G GKV+I Sbjct: 361 REAMKKVSGLARTARGPSMSAGPGKVEI 388 >gi|150399938|ref|YP_001323705.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii SB] gi|150012641|gb|ABR55093.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii SB] Length = 594 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 95/350 (27%), Positives = 165/350 (47%), Gaps = 32/350 (9%) Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPH--NPNDPIAR-QFIPQKEE 66 + ++L + ++K I++ +E N+ +TP +L++ ND R Q IP Sbjct: 206 TLENLVRVSELEKYSIEKARE--NNIPFGITPYYVSLMDNSLDRRNDHAVRAQVIPPVRY 263 Query: 67 LNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 + E R D +G+++ SP+ + RYP ++K C C +C R + Sbjct: 264 VEKTIEARSSGKNLDFMGESDTSPVDLVTRRYPMIAIMKPYETCAQICVYCQRNWQIKDV 323 Query: 122 -KGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 VL+SK++ A+ + E I E++ TGGDP ILS++ L +L IKH++ +R Sbjct: 324 FSDNVLASKESVNNAINWFNENECIKELLLTGGDPAILSNEYLDYLLSEFSKIKHLERIR 383 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGI 235 +R P+ PQRI E + L + KP + I+ H H YE + + AISRL N+GI Sbjct: 384 IGTRTPVALPQRITNEFSEILGKYNKPGVREIAISTHVEHVYEVTADLRDAISRLKNSGI 443 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVEL-RIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 + +Q V I + + +R ++L I+PYYL + T+++R+ I + + Sbjct: 444 TVYNQQVFT--IENSRRFETSALRKVLKLIGIEPYYLFNTKGKEETTNYRVPI---ARAL 498 Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 KE+ L GY + N+ K+G + H+++ Sbjct: 499 QERKEEAR----------LLPGYCRTDSTVFNVPKLGKNNLNFYQDHDVI 538 >gi|220934891|ref|YP_002513790.1| radical SAM domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996201|gb|ACL72803.1| radical SAM domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] Length = 455 Score = 114 bits (285), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 78/256 (30%), Positives = 122/256 (47%), Gaps = 16/256 (6%) Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 N ++G+ H+Y + +L C YC FCFR K ++S + L Y++ Sbjct: 135 NGEVVEGLQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLRIASNQKDQVLGYLR 194 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLR---YIKHVQILRFHSRVPIVDPQRINPE- 195 E Q+ +++ TGGDP+++ K L + L+ L + HVQ +R ++ P R + Sbjct: 195 EHPQVTDLLVTGGDPMVMKTKNLAQYLEPLMEDDSLAHVQTVRIGTKALTFWPYRFVTDN 254 Query: 196 -------LIQCLKEAGKPVYIAIHANHPYEFSEEAIA--AISRLANAGIILLSQSVLLKG 246 L+ L ++G+ V I H NH E E IA AI RL G+ + SQ LL Sbjct: 255 DADELLDLLTRLVKSGRQVAIMAHYNHWREL-ETPIAREAIRRLRETGVEIRSQGPLLAH 313 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDDP + A L +T V+L I PYY+ +F + + I +++SGL + Sbjct: 314 INDDPAVWARLWKTQVQLGIIPYYMFVERDTGARHYFEVPLARAANIYREAMKQVSGLGR 373 Query: 307 PFYILDLPGGYGKVKI 322 + G GKV+I Sbjct: 374 TARGPSMSAGPGKVEI 389 >gi|32967991|gb|AAP92506.1| lysine 2,3-aminomutase [Streptomyces vinaceus] Length = 445 Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 83/324 (25%), Positives = 151/324 (46%), Gaps = 35/324 (10%) Query: 26 DEIKEISNHYS---IALTPVIANLINPHNPND-----------PIARQFIPQKEELNIL- 70 D++ E H + + +TP + N I P P D P+ R +P + + ++ Sbjct: 50 DDLTEDQEHMATMAMLITPQMLNTIAPETPADSDGYHDAFYADPVRRYMVPVRSDRDLRW 109 Query: 71 ---PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS------- 120 P D + + ++G+ RYP ++L +L+ CP YC C R ++VG Sbjct: 110 PSHPLSSRDSLHEAEMWVVEGLTRRYPTKVLAELVATCPQYCGHCTRMDLVGGSTPSVDK 169 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q+ T+ + EA L +++ + +V+ +GGD + RL+ L L I V+ +R Sbjct: 170 QRLTLRPADRQEAILDHLRRTPGVRDVVVSGGDVANVPWPRLESFLLRLLEIDSVRDIRL 229 Query: 181 HSRVPIVDPQR-INPELIQCLKE-----AGKPVYIAI--HANHPYEFSEEAIAAISRLAN 232 S+ + PQ + P+++ L+ A + V++A+ HANH + L + Sbjct: 230 ASKALVGLPQHWLQPQVVSGLENVAGVAARRGVHLAVHTHANHVQSVTPLVAEGARALLD 289 Query: 233 AGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 AG+ + +Q VL++G+ND L +L E I PYY + D+ G H+R ++ E Sbjct: 290 AGVRDVRNQGVLMRGVNDSTAALLDLCFALQDEAGILPYYFYMCDMVPGAEHWRTSLAEA 349 Query: 291 QKIVASLKEKISGLCQPFYILDLP 314 Q + ++ + G P + D+P Sbjct: 350 QDLQHAIMGYLPGYATPRIVCDVP 373 >gi|147919038|ref|YP_687235.1| hypothetical protein RRC148 [uncultured methanogenic archaeon RC-I] gi|110622631|emb|CAJ37909.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 633 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 85/325 (26%), Positives = 152/325 (46%), Gaps = 18/325 (5%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPI 56 Q++H LT + + + +++I +K H + +TP +L N + + Sbjct: 236 WQMKH-ILTDYKTISELVRLDQDEISALKFAQEHNIPVQITPYYLSLFNKAGRSALDRAV 294 Query: 57 ARQFIPQKEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111 Q +P + + R+ D +G+ SP++GI RYP ++LK CP C + Sbjct: 295 RAQVLPSMNYCKTIVKNRQSAADMDFMGEKWTSPVEGITRRYPQILILKPYDSCPQICVY 354 Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 C R + S + + A+ +I++ I EV+ TGGDPL ++ + + +L+ + Sbjct: 355 CQRNWEIKSIDEAEVKRDTIQNAIQWIKDNESISEVLITGGDPLTMNDQYIDSLLRKVSG 414 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAI 227 I HV+ LR +R P+ P RI P+L + LK+ +P V + H HP E + E++ A+ Sbjct: 415 IDHVERLRIGTRTPVTVPFRITPKLAEILKQYHQPGAREVCVVTHFEHPMEMTPESLQAV 474 Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287 + AG+ + +Q V + EI A + + + PYY + T FR+ I Sbjct: 475 QTIRQAGMSVYNQQVFTYYNSRKFEI-AKMRKVLKICGVDPYYTFNTKGKEETMDFRVPI 533 Query: 288 ---EEGQKIVASLKEKISGLCQPFY 309 E+ +K A L+ I +P + Sbjct: 534 ARVEQERKEEARLQPGIVRTDEPVF 558 >gi|84496424|ref|ZP_00995278.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649] gi|84383192|gb|EAP99073.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649] Length = 484 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 79/299 (26%), Positives = 145/299 (48%), Gaps = 23/299 (7%) Query: 54 DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 DP+ R +P ++ + P D + +++ ++G+ HRYP ++L ++L CP YC Sbjct: 115 DPVRRYMLPVFSDRRTDWPSHPFAARDSLHEHDMWAVEGLTHRYPTKVLAEMLPTCPQYC 174 Query: 110 RFCFRREMVGSQKGTVLSSK------DTEAA-LAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C R ++VG+ ++ K D AA L Y+Q Q+ +V+ +GGD + K L Sbjct: 175 GHCTRMDLVGNSTAQIVKLKLAGKPVDRHAAMLDYLQRTPQVRDVVVSGGDVANMPWKNL 234 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCL-------KEAGKPVYIAIHAN 214 + L L I +++ +R ++ + PQ + P++++ + + G + I H N Sbjct: 235 EGFLDKLMRIDNIRDIRLATKALMGLPQHWLQPDVVEGVARVSALARSRGVSLAIHTHVN 294 Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272 H + A + AG+ + +Q VL++GIND + L +L E I PYY + Sbjct: 295 HAQSVTPLVADASKAMLEAGVRDVRNQGVLMRGINDTSKDLLDLCFALQDEAMITPYYFY 354 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP--GGYGKVKIDTHNIKK 329 D+ + H+RL + E Q + S+ + G P + D+P G ++DT++ K Sbjct: 355 MCDMIPFSEHWRLALHEAQHLQHSIMGYLPGFATPRIVCDVPFVGKRWVHQVDTYDRDK 413 >gi|149194496|ref|ZP_01871592.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus TB-2] gi|149135240|gb|EDM23720.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus TB-2] Length = 414 Score = 114 bits (284), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 92/344 (26%), Positives = 154/344 (44%), Gaps = 38/344 (11%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQ 59 M+ + ++ S + L + KE I+ IK +S + + IA+L++ N +DPI R Sbjct: 1 MRYKSYSVKSFEKLPFVRKMDKEDIENIKVVSKIFPFKINEYIASLVDWDNYKDDPIFRL 60 Query: 60 FIPQKE------------------------ELNILPEEREDPIGDNNHSPLKGIVHRYPD 95 P K+ +LN P + + I + N L+G H+Y + Sbjct: 61 IFPHKDMLDSKDFEKLKNSNDEKLIYDIRMKLNPHPAGQMENIPEINGKRLEGSQHKYKE 120 Query: 96 RILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 IL K C YC FCFR +SK+ E + YI+ I +V+FTGGD Sbjct: 121 TILFFPKQGQTCHAYCSFCFRWPQFIGINELKFASKEVEILIEYIKANPTITDVLFTGGD 180 Query: 154 PLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EA 203 PL++S K L+ +K L I H++ +R ++ P R EL+ K ++ Sbjct: 181 PLVMSTKLLKAYIKPLIEAKIPHLKNIRIGTKALSFWPYRFLTDEDANELLDLFKYIVDS 240 Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 G + H NH E ++E A+ ++ + G I+ +QS LL+ IND ++ + + V Sbjct: 241 GYHLAFMAHFNHYKELQTDEVKEAVKKILSTGAIIRTQSPLLRHINDSSKVWEIMWKEQV 300 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 L + PYY+ +F L + + +I +SGL + Sbjct: 301 ALNMIPYYMFVARDTGAKRYFELPLSKAWEIYKGAISNVSGLAR 344 >gi|193211898|ref|YP_001997851.1| radical SAM domain-containing protein [Chlorobaculum parvum NCIB 8327] gi|193085375|gb|ACF10651.1| Radical SAM domain protein [Chlorobaculum parvum NCIB 8327] Length = 433 Score = 113 bits (283), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 86/350 (24%), Positives = 159/350 (45%), Gaps = 46/350 (13%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIAR 58 + + T + Q L + I EQ+ IK ++ Y + +A NLI+ N P+DP+ R Sbjct: 2 LTFQSYTAENIQQLPQYDTIPPEQLHAIKVVAEVYPFRVNSHVAENLIDWSNIPDDPMFR 61 Query: 59 QFIPQ--------------------------KEELNILPEEREDPIGDN-------NHSP 85 PQ +E I + +P G + P Sbjct: 62 LSFPQAGMLSGEDFRTISDLVLSDADSQLIRQEARKIQLRQNPNPAGQMELNTPRLDGEP 121 Query: 86 LKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G+ H+Y + +L L VC YC +CFR + +++ + + Y++ + Sbjct: 122 LHGMQHKYRESVLFFPLEAQVCHAYCTYCFRWPQFSGLESLKFANESVDKLIDYLRSHPE 181 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-----LIQ 198 + +VIFTGGDP+++S + ++K ++ L + ++ +R ++ P R + LI+ Sbjct: 182 VKDVIFTGGDPMVMSTELIEKYMRPLLDVPTLRTIRIGTKSLSWWPGRFTTDSDADQLIR 241 Query: 199 CLKE---AGKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 +E +GK + I H +HP E EA+ A+ R+ + G ++ SQS +++ +NDD E+ Sbjct: 242 FFEEVVTSGKHLAIMAHMSHPREIDNPEAVDAVRRIRSTGAVIRSQSPVVRHVNDDSEVW 301 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 + + V+L + PYY+ +F + + E I ++SGL Sbjct: 302 EEMWQKQVQLGVIPYYMFLERDTGPKHYFEVPLAEALDIYNGAYRQMSGL 351 >gi|120556236|ref|YP_960587.1| radical SAM domain-containing protein [Marinobacter aquaeolei VT8] gi|120326085|gb|ABM20400.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8] Length = 454 Score = 113 bits (283), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 93/328 (28%), Positives = 141/328 (42%), Gaps = 47/328 (14%) Query: 42 VIANLINPHN-PNDPIARQFIPQK--------EELNILPEERED---------------- 76 VI LIN PNDPI + PQK E + L E D Sbjct: 61 VINELINWDKVPNDPIYQLVFPQKGMLKDEHYERMAQLHREGADKKDIQAAAKEIRDALN 120 Query: 77 --PIG-------DNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125 P G + + L G+ H+Y + +L C YC FCFR K Sbjct: 121 PHPAGQMEMNMPELDGEVLDGVQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLK 180 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSR 183 ++S D E Y+QE +++ +++ TGGDP+++ K L + L+ L H+Q +R ++ Sbjct: 181 MASTDAEKLHGYLQEHTEVTDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTK 240 Query: 184 VPIVDPQRINP--------ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234 P R EL L + GK V I H NH E + + A AI R+ G Sbjct: 241 ALTFWPYRFVTDKDADELIELFARLVDGGKHVAIMAHYNHWQEITTDIAEEAIRRIRATG 300 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 + +Q L+K +NDD + A L + V+L I PYY+ ++F + + E I Sbjct: 301 AEIRAQGPLIKHVNDDADAWAKLWKKEVKLGIIPYYMFVERDTGAKNYFEVPLAEAYHIY 360 Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKI 322 +++SGL + + G GKV+I Sbjct: 361 REAMKQVSGLARTARGPSMSAGPGKVEI 388 >gi|218781690|ref|YP_002433008.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum alkenivorans AK-01] gi|218763074|gb|ACL05540.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum alkenivorans AK-01] Length = 594 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 82/265 (30%), Positives = 128/265 (48%), Gaps = 18/265 (6%) Query: 37 IALTPVIANLINPHNPND---PIARQFIPQKEELNILPEERE------DPIGDNNHSPLK 87 +TP A+L++ + Q IP + L E R+ D + +N+ SP++ Sbjct: 230 FGITPYYASLMDEKEDRKRDYAVRAQVIPPLNYIEKLWEARQRSEASMDFMLENDTSPIE 289 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRR---EMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 GI RYP ++LK + CP C +C R E V SQ LS K E A+ +I + +I Sbjct: 290 GITRRYPMIVILKPILTCPQICVYCQRNWEIEDVYSQTA-ALSQKKLERAIQWIADTPEI 348 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL---IQCLK 201 EV+ TGGDP +LS+ R++ +L L IKH++ +R +R P+ PQRI L I Sbjct: 349 REVLVTGGDPFLLSNSRIENLLFRLSSIKHIERIRIGTRTPVTLPQRITESLARDIGHFH 408 Query: 202 EAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 E GK + + H HPYE + A+ A+ ++ G+ + +Q V N A L Sbjct: 409 EPGKREITVITHFEHPYEITPNAMEAVQKIRRLGMSVKNQMVFTT-FNSRKFEAAVLRHK 467 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRL 285 + + PYY + T +R+ Sbjct: 468 LSLIGVSPYYTFNTKGKEETEDYRV 492 >gi|328949906|ref|YP_004367241.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884] gi|328450230|gb|AEB11131.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884] Length = 441 Score = 113 bits (282), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 71/252 (28%), Positives = 125/252 (49%), Gaps = 11/252 (4%) Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 N L G+ H+Y + +L C YC +CFR + +++T+ +AY+Q Sbjct: 127 NGRKLPGLQHKYHETVLFFPGQGQTCHAYCTYCFRWAQFIGLQDIKFEARETDDLVAYLQ 186 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---- 195 ++ +V+ TGGDP+I+ K L+K L+ L I ++ +R ++ PQR + Sbjct: 187 AHPEVTDVLVTGGDPMIMRTKILRKYLEPLLEIPTLRTIRIGTKSLAYWPQRYVTDADAD 246 Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDD 250 + + AGK + I H++HP E + A AI R+ G ++ +Q+ L+K +NDD Sbjct: 247 DALRFFEEIVAAGKHLAIMAHSSHPVELATPIAQEAIRRVRETGAVIRTQAPLIKHVNDD 306 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 P++ A R V+L + PYY+ +F + + Q+I A+ ++SGL + Sbjct: 307 PDVWAEKWRQEVKLGMIPYYMFVERDTGPKRYFEVPLARAQEIFAAAWRQVSGLARTVRG 366 Query: 311 LDLPGGYGKVKI 322 + GKV+I Sbjct: 367 PSMSAFPGKVRI 378 >gi|56460615|ref|YP_155896.1| lysine 2,3-aminomutase related protein enzyme [Idiomarina loihiensis L2TR] gi|56179625|gb|AAV82347.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina loihiensis L2TR] Length = 448 Score = 112 bits (281), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 90/345 (26%), Positives = 154/345 (44%), Gaps = 51/345 (14%) Query: 27 EIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84 E+K ++N + + N LI+ N PNDP+ + PQK+ L +R + H+ Sbjct: 41 EMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLTFPQKDMLEPSAYQRMADLMSGKHT 100 Query: 85 ---------------------------------PLKGIVHRYPDRILL--KLLHVCPVYC 109 PL G+ H+Y + +L C YC Sbjct: 101 TNEVFDLATQLRDEMNPHPAGQMQMNVPHVDGEPLPGMQHKYRETVLFFPAQGQYCHSYC 160 Query: 110 RFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 FCFR + VG K T +S D + Y+ + ++ +++ TGGDP+++ ++L L+ Sbjct: 161 TFCFRWAQFVG--KATRFNSNDADQLHRYLAQHKEVTDLLVTGGDPMVMRTRKLAHYLEG 218 Query: 169 LRY--IKHVQILRFHSRVPIVDPQRI--NPELIQCLK------EAGKPVYIAIHANHPYE 218 L +H++ +R ++ P R +P+ L+ + GK V I H NHP E Sbjct: 219 LLQPEFEHIKTIRIGTKSLTFWPYRFITDPDADDLLRLLERLVDGGKHVSIMAHLNHPNE 278 Query: 219 FSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277 E AI RL G+ + Q+ LLK INDDP++ A++ V+L + PYY+ Sbjct: 279 LRTEVCQEAIRRLRATGVQIRCQAPLLKHINDDPDVWASMWEKQVQLGLIPYYMFVERDT 338 Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 +F + +E +I +++SG+ + + G GKV++ Sbjct: 339 GAKRYFEVPLERTWEIFQKAYQQVSGIARTVRGPSMSAGPGKVEV 383 >gi|108758698|ref|YP_632865.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622] gi|108462578|gb|ABF87763.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622] Length = 456 Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 78/301 (25%), Positives = 149/301 (49%), Gaps = 22/301 (7%) Query: 36 SIALTPVIANLINPHN-PNDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIV 90 S+ + P + N +N + DP+ R +P + E P+ D + + + ++G+ Sbjct: 90 SLLVPPQMLNTMNLEDLWRDPVRRYMLPAYADRLTEWTNHPKASRDSLHEQDMWVVEGLT 149 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEA-ALAYIQEKSQ 143 HRYP ++L ++L CP YC C R ++VG+ V + KD A L Y++ Sbjct: 150 HRYPTKVLAEMLPTCPQYCGHCTRMDLVGNDVPQVSKHKFGIGPKDRYAQMLDYLRRTPT 209 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCLK- 201 + +V+ +GGD L ++L+ + +L I +++ +R S+ + PQ + ++Q L Sbjct: 210 VRDVVVSGGDIANLPIQQLEPFVSSLMDIPNIRDIRLASKGLMAIPQHFLQDSVLQGLDR 269 Query: 202 ------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEIL 254 E G + + H NH + + A+ +L G + +Q VLL+G+ND P+ L Sbjct: 270 LAKKAVERGVDLALHTHVNHAQQLTPLVGKAVRKLLEMGFRDVRNQGVLLRGVNDSPQAL 329 Query: 255 ANLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 +L T ++ +I PYY + D+ + H+RL++ + Q++ + + G P + D+ Sbjct: 330 LDLCFTLLDHAKILPYYFYMCDMIPNSEHWRLSVAQAQQLQHDIMGYMPGFATPRIVCDV 389 Query: 314 P 314 P Sbjct: 390 P 390 >gi|124004604|ref|ZP_01689449.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina ATCC 23134] gi|123990176|gb|EAY29690.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina ATCC 23134] Length = 448 Score = 112 bits (280), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 71/263 (26%), Positives = 124/263 (47%), Gaps = 13/263 (4%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 + +D + + + L G+ H+Y + +L C YC FCFR + ++ Sbjct: 110 QMKDNVPEVDGVKLTGVQHKYRETMLFFPSQGQTCHAYCTFCFRWPQFVGMNELKFAMRE 169 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVD 188 TE + YI+ I +++FTGGDPLI+ K L + L + +++ +R ++ Sbjct: 170 TELLVKYIKVNPHITDILFTGGDPLIMKTKILASYVDALLEADLPNLKTIRIGTKALGYW 229 Query: 189 PQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLS 239 PQR + L + + +AGK + H NH E +EE AI R+ N G + + Sbjct: 230 PQRFTSDTDADDLLRLFERVNKAGKHLAFMSHFNHGRELETEEVQKAIGRILNTGTAIRT 289 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QS ++K IND E A + R V+L PYY+ +F + ++ +I + Sbjct: 290 QSPIMKNINDSAEAWAYMWRKQVDLGCVPYYMFLARDTGAQDYFAIELDRAWQIFQQSYQ 349 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++SG+C+ + G GKV++ Sbjct: 350 QVSGVCRTVRGPSMSAGPGKVQV 372 >gi|295401597|ref|ZP_06811565.1| lysine 2,3-aminomutase YodO family protein [Geobacillus thermoglucosidasius C56-YS93] gi|294976364|gb|EFG51974.1| lysine 2,3-aminomutase YodO family protein [Geobacillus thermoglucosidasius C56-YS93] Length = 218 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 61/159 (38%), Positives = 95/159 (59%), Gaps = 6/159 (3%) Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEA 223 +R I HV+I+RF S++P+ +P RI + EL+ ++ P +Y+ H NHP E +EEA Sbjct: 1 MRAIDHVKIIRFGSKLPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEA 60 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283 A L +AG+I+++Q+ +LKGINDDPE+LA L+ + PYY AG S F Sbjct: 61 RKAFQALHDAGVIVVNQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDF 120 Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 LT+E+ +IV K + SGL + ++ + GK++I Sbjct: 121 VLTLEKVYQIVEQAKARTSGLGKRVRLV-MSHSSGKIEI 158 >gi|326331434|ref|ZP_08197724.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium Broad-1] gi|325950690|gb|EGD42740.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium Broad-1] Length = 465 Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 77/282 (27%), Positives = 132/282 (46%), Gaps = 21/282 (7%) Query: 54 DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 DPI IP ++ + P+ D + +++ +G+ HRYP ++L +LL CP YC Sbjct: 120 DPIRHYMIPVFSDRRTDWPSHPQASRDSLHEHDMWVAEGLTHRYPTKVLAELLSTCPQYC 179 Query: 110 RFCFRREMVGSQKGTVLSSKDT-------EAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C R ++VG+ + K T EA L Y++ Q+ +V+ +GGD L RL Sbjct: 180 GHCTRMDLVGNSTPVIDKLKLTGKPVDRHEAMLDYLRNTPQVRDVVVSGGDVANLPWPRL 239 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHAN 214 + L L I +++ +R ++ I PQ E + +E G + + HAN Sbjct: 240 EDFLTKLMAIDNIRDIRLATKGLIGLPQHWLQEPLLEGMSRVTSIARERGVSLAVHTHAN 299 Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANL-MRTFVELRIKPYYLH 272 H + A L AG+ + +Q VLL G+N D L +L R +I PYY + Sbjct: 300 HANSVTPLVAEASKALMAAGVRDVRNQGVLLAGVNADSHSLLDLCFRLLDGAQIMPYYFY 359 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 D+ + H+R+++ + Q++ + + G P + D+P Sbjct: 360 MCDMIPFSEHWRVSVADAQRMQHDIMGYLPGFATPRIVCDVP 401 >gi|85711269|ref|ZP_01042328.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica OS145] gi|85694770|gb|EAQ32709.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica OS145] Length = 457 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 88/345 (25%), Positives = 154/345 (44%), Gaps = 51/345 (14%) Query: 27 EIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84 E+K ++N + + N LI+ N PNDP+ + PQK+ L+ +R + H+ Sbjct: 50 EMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLTFPQKDMLDPSAFQRMADLMSGKHT 109 Query: 85 ---------------------------------PLKGIVHRYPDRILL--KLLHVCPVYC 109 PL G+ H+Y + +L C YC Sbjct: 110 TNEVFDLATQLRQEMNPHPAGQMQMNVPHVDGEPLPGMQHKYRETVLFFPAQGQYCHSYC 169 Query: 110 RFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 FCFR + VG K T +S D + Y+ + ++ +++ TGGDP+++ ++L+ L+ Sbjct: 170 TFCFRWAQFVG--KATRFNSNDADQLHRYLAQHKEVTDLLVTGGDPMVMRTRKLKHYLEG 227 Query: 169 LRY--IKHVQILRFHSRVPIVDPQRI--NPE------LIQCLKEAGKPVYIAIHANHPYE 218 L H++ +R ++ P R +P+ L++ L GK V I H NH E Sbjct: 228 LLQPEFDHIKTIRIGTKALTFWPYRFITDPDADELMRLLEKLVRGGKHVSIMAHLNHHNE 287 Query: 219 FSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277 E AI RL G + Q+ LL+ INDDP++ A++ V+L + PYY+ Sbjct: 288 LRTEVCEEAIRRLRATGAQIRCQAPLLRHINDDPKVWADMWEREVQLGMIPYYMFVERDT 347 Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 +F + +E ++ +++SG+ + + G GKV++ Sbjct: 348 GAKRYFEVPLERTWEVFQQAYQQVSGIARTVRGPSMSAGPGKVEV 392 >gi|108759631|ref|YP_634392.1| hypothetical protein MXAN_6263 [Myxococcus xanthus DK 1622] gi|108463511|gb|ABF88696.1| conserved hypothetical protein [Myxococcus xanthus DK 1622] Length = 442 Score = 111 bits (277), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 66/253 (26%), Positives = 121/253 (47%), Gaps = 11/253 (4%) Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 N P+ G+ H+Y + +L+ K C YC +CFR +S++ E + YI+ Sbjct: 132 NEEPVPGLQHKYKETVLIFPKQGQTCHAYCTYCFRWAQFVGDADLKFASREIEPLVNYIR 191 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---- 195 ++ V+FTGGDP+I++ L K ++ L I+H++ +R ++ PQR + Sbjct: 192 AHPEVTNVLFTGGDPMIMTEAVLAKYIEPLLDIEHLEAIRIGTKALAYWPQRFVTDSDAD 251 Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250 L + + +GK + H +HP E E + A+ R+ G ++ +Q+ L++ IND Sbjct: 252 DILRLFEKVVASGKSLAFMAHFSHPNEMVPEIVQEAVRRIRGTGAVIRTQAPLIRTINDT 311 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 P ++ RT + + PYY+ +F + + E I + + +SGL + Sbjct: 312 PGTWESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYDIFRNAFQSVSGLARTVRG 371 Query: 311 LDLPGGYGKVKID 323 + GKV +D Sbjct: 372 PSMSATPGKVCVD 384 >gi|300087493|ref|YP_003758015.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527226|gb|ADJ25694.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 440 Score = 110 bits (276), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 63/237 (26%), Positives = 118/237 (49%), Gaps = 12/237 (5%) Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYI 138 N L GI H+Y + +L C YC FCFR + V + ++S++ + + Y+ Sbjct: 117 NGESLPGIQHKYRETVLFFPSQGQTCHAYCTFCFRWPQFVKGMEDLKIASREIDTLVEYL 176 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--- 195 + + ++ +V+ TGGDPL++ L + ++ L + ++ +R +R P R + Sbjct: 177 KSRPEVTDVLVTGGDPLVMKAGLLARYIEPLLVLPGIRTIRIGTRSLSFWPYRYVTDDDA 236 Query: 196 -----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGIND 249 L + ++EAGK + H NHP E E + A+ R+ G ++ +QS LL+ IND Sbjct: 237 EELLTLFRRVREAGKHLAFMAHFNHPVELLPEIVPEAVRRIRETGAVIRTQSPLLRHIND 296 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 + A + R V++ PYY+ +F +T+++ ++ + ISG+C+ Sbjct: 297 SEALWAQMWRRQVDMGCVPYYMFMARDTGAQRYFSVTLQDAWRVYQGAFQAISGICR 353 >gi|269126573|ref|YP_003299943.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183] gi|268311531|gb|ACY97905.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183] Length = 456 Score = 110 bits (276), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 79/301 (26%), Positives = 138/301 (45%), Gaps = 25/301 (8%) Query: 39 LTPVIANLINPHNPN----DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIV 90 +TP + N ++ DP+ R +P ++ + P D + + + ++G+ Sbjct: 88 VTPQMLNTMDTSTTEAFYADPVRRYMLPVASDRRTDWPSHPCATRDSLHEADMWAVEGLT 147 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAYIQEKSQ 143 HRYP ++L +LL CP YC C R ++VG+ V + T EA L Y++ Sbjct: 148 HRYPTKVLAELLSTCPQYCGHCTRMDLVGTSTPAVAKHRFTARPADRHEAMLEYLRRTPT 207 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-------RINPE- 195 + +V+ +GGD L RL+ + L I ++ +R ++ + PQ R E Sbjct: 208 VRDVVVSGGDVANLPWPRLEAFVDRLLDIDSIRDIRLATKALMALPQHWLQDEVRAGMER 267 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEIL 254 L + G + + H N + A L AG+ + +Q VLL G+ND P L Sbjct: 268 LAAKARRRGVALAVHTHVNTARSLTPLVARAARGLLEAGVRDVRNQGVLLHGVNDSPAAL 327 Query: 255 ANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 +L + E +I PYYL+ D+ G+ H+RL + Q++ ++ + G P + D+ Sbjct: 328 LDLSFALLDEAQIMPYYLYMCDMIPGSEHWRLPLWRAQELQHAIMGYLPGFATPRIVCDV 387 Query: 314 P 314 P Sbjct: 388 P 388 >gi|30249230|ref|NP_841300.1| hypothetical protein NE1247 [Nitrosomonas europaea ATCC 19718] gi|30180549|emb|CAD85158.1| DUF160 [Nitrosomonas europaea ATCC 19718] Length = 452 Score = 110 bits (275), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 70/252 (27%), Positives = 121/252 (48%), Gaps = 13/252 (5%) Query: 84 SPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 PL G H+Y + +L VC YC FCFR K +S + Y+ Sbjct: 137 EPLPGTQHKYRETVLFFPSQGQVCHSYCTFCFRWAQFIGDKELRFASNEAGNLHKYLAGH 196 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE---- 195 + +++ TGGDP+++ L+ L+ + ++HVQ +R ++ PQR + Sbjct: 197 KDVTDLLMTGGDPMVMKTHHLKAYLEAMLRPALEHVQNIRIGTKSLTFWPQRYVTDEDAH 256 Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250 L++ L +AGK V + H NH E + A+ R+ AG+++ +Q+ +++ INDD Sbjct: 257 ELLALLERLVKAGKHVALMAHFNHWREMDTPIVREAVRRIRAAGVVIRAQAPIVRNINDD 316 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 P + A + RT V + I PYY+ +F + +E +I +++SGL + Sbjct: 317 PAVWAKMWRTQVGMGIIPYYMFVERDTGAKRYFEVPLERTYQIYREAIQQVSGLARTVRG 376 Query: 311 LDLPGGYGKVKI 322 + G GKV+I Sbjct: 377 PSMSAGPGKVEI 388 >gi|72160676|ref|YP_288333.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX] gi|71914408|gb|AAZ54310.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX] Length = 453 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 63/253 (24%), Positives = 125/253 (49%), Gaps = 11/253 (4%) Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + P+ G+ H+YP+ +L K C YC +CFR + ++S + + +AY++ Sbjct: 131 DDEPMPGVQHKYPETVLFFPKQGQTCHSYCTYCFRWAQFVGEPDLKMASDEIDRLVAYLR 190 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE-- 195 + ++ V+ TGGDP+I+ L++ ++ L ++ ++ +R ++ PQR +P+ Sbjct: 191 QHPEVTGVLLTGGDPMIMGEAVLRRYIEPLLEVETLESIRIGTKALAYWPQRFVTDPDAD 250 Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250 L + + +GK + H +HP E + + A+ R+ + G ++ +Q+ L++ IND Sbjct: 251 DTLRLFEQVVNSGKNLAFMAHFSHPRELEPDIVREAVRRIRDTGAVIRTQAPLIRTINDS 310 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 E A + RT V L + PYY+ +F + + + +I +SGL + Sbjct: 311 SETWATMWRTQVRLGMIPYYMFVERDTGPQDYFAVPLAQAYEIFRKAYNSVSGLARTVRG 370 Query: 311 LDLPGGYGKVKID 323 + GKV +D Sbjct: 371 PSMSATPGKVCVD 383 >gi|213585072|ref|ZP_03366898.1| hypothetical protein SentesTyph_29075 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 219 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 87/147 (59%), Gaps = 3/147 (2%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + C V CR Sbjct: 67 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR ++ + ++ AL YI ++ E+IF+GGDPL+ L +L L Sbjct: 126 YCFRRHFPYAENQG--NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLE 183 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELI 197 IKHV+ LR HSR+PIV P RI EL+ Sbjct: 184 AIKHVKRLRIHSRLPIVIPARITDELV 210 >gi|271970119|ref|YP_003344315.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021] gi|270513294|gb|ACZ91572.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021] Length = 461 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 76/293 (25%), Positives = 139/293 (47%), Gaps = 12/293 (4%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEERED-PIGDNNHSPLKGIVHRYPDRILL-- 99 +A L+ PN I + LN P + D + P+ G+ H+YP+ +L Sbjct: 85 LAGLLRAGAPNAEIQAAAREVRMRLNPHPAGQLDLNVPRVGEDPMPGMQHKYPETVLFFP 144 Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 K C YC +CFR + +S D + + Y+++ ++ V+FTGGDP+I+S Sbjct: 145 KQGQTCHAYCTYCFRWAQFIGEPDLKFASDDVDNLVGYLKKHPRVTSVLFTGGDPMIMSE 204 Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK------EAGKPVYIAI 211 L++ L+ L ++ ++ +R ++ PQR +P+ L+ +AGK + Sbjct: 205 SVLRRYLEPLLELEQLESIRIGTKSLAYWPQRFVSDPDAADTLRLFASVVDAGKNLAFMA 264 Query: 212 HANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 H +HP E S A AA++ + G ++ +Q+ L++ INDDP +++ R + + + PYY Sbjct: 265 HFSHPREMESPVAEAAVAGILATGAVIRTQAPLIRTINDDPATWSSMWRRQLTMGMVPYY 324 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + +F + + +I +SGLC+ + GKV +D Sbjct: 325 MFVERDTGPQDYFAVPLARAHEIFRDAYASVSGLCRTVRGPSMSATPGKVCVD 377 >gi|114320341|ref|YP_742024.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1] gi|114226735|gb|ABI56534.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1] Length = 456 Score = 110 bits (274), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 71/250 (28%), Positives = 120/250 (48%), Gaps = 13/250 (5%) Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L+G+ H+Y + +L VC YC FCFR K +S + E AY+++ + Sbjct: 139 LEGMQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFVGDKDLQFASNEAERLHAYLRDHRE 198 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------ 195 + +++ TGGDP+++ ++L++ L L ++HVQ +R ++ P R + Sbjct: 199 VSDLLLTGGDPMVMKTRKLEEYLDPLLAADLEHVQTVRLGTKALTFWPYRFVTDKDADDL 258 Query: 196 --LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPE 252 L + L +G+ V + H NHP E A AI R+ + G+ + +Q LL IND E Sbjct: 259 LRLFERLVNSGRHVALMAHYNHPQELKTPIAEEAIRRIRDTGVEIRAQGPLLAHINDSSE 318 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 A L R V L I PYY+ +F + + +I +++SGL + Sbjct: 319 AWAELWRKQVRLGIIPYYMFVERDTGARHYFEVPLARAWEIYRDAMKQVSGLGRTARGPS 378 Query: 313 LPGGYGKVKI 322 + G GKV++ Sbjct: 379 MSAGPGKVEV 388 >gi|297563081|ref|YP_003682055.1| hypothetical protein Ndas_4154 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847529|gb|ADH69549.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 454 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 65/253 (25%), Positives = 121/253 (47%), Gaps = 11/253 (4%) Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 N P+ G+ H+Y + +L K C YC +CFR +S + + + Y++ Sbjct: 132 NEEPIPGVQHKYKETVLFFPKQGQTCHAYCTYCFRWAQFVGDADLKFASSEIDQLVDYVR 191 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE-- 195 ++ V+FTGGDP+I+ + K ++ L I+H++ +R ++ PQR +P+ Sbjct: 192 SHPEVTSVLFTGGDPMIMGEGVISKYIEPLLEIEHLEAIRIGTKALAYWPQRFVTDPDAD 251 Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDD 250 L + + +GK + H +HP E E A A+ R+ G ++ +Q+ L++ INDD Sbjct: 252 DTLRLFEKVVASGKNLAFMAHFSHPNEMRPELAQEAVRRIRATGAVIRTQAPLIRTINDD 311 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 + ++ RT + + PYY+ +F + + E +I + +SGL + Sbjct: 312 SAVWESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYEIFRGAYKSVSGLARTVRG 371 Query: 311 LDLPGGYGKVKID 323 + GKV +D Sbjct: 372 PSMSATPGKVCVD 384 >gi|291301420|ref|YP_003512698.1| lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728] gi|290570640|gb|ADD43605.1| Lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728] Length = 475 Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 72/282 (25%), Positives = 134/282 (47%), Gaps = 21/282 (7%) Query: 54 DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 DPI R +P ++ + P D + +++ +G+ HRYP ++L +LL CP YC Sbjct: 110 DPIRRYMLPVFSDRRTDWPSHPHATRDSLHEHDMWVAEGLTHRYPTKVLAELLSTCPQYC 169 Query: 110 RFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C R ++VG+ T+ K +A + Y+Q + +V+ +GGD + K L Sbjct: 170 GHCTRMDLVGNSTPTIDKLKLKLKPMARYDAMIEYLQSHPGVRDVVVSGGDVANVPWKNL 229 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCL-------KEAGKPVYIAIHAN 214 + + L I+ ++ +R ++ + PQ + +++ + +E G + I H N Sbjct: 230 ENFISRLLEIESIRDIRLATKALMGLPQHWLQDDVVDGMGRVATVARERGVNLAIHTHVN 289 Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272 H + A + +AG+ + +Q VL+ G+N+ PE L +L E I PYY + Sbjct: 290 HVQSLTPTVARAARAMLDAGVRDVRNQGVLMNGVNNSPEALLDLCFALQGEANILPYYFY 349 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 D+ + H+R ++ E Q + ++ + G P I D+P Sbjct: 350 MCDMIPNSEHWRTSVSEAQALQTAIMGYLPGYATPRIICDVP 391 >gi|292491849|ref|YP_003527288.1| L-lysine 2,3-aminomutase [Nitrosococcus halophilus Nc4] gi|291580444|gb|ADE14901.1| L-lysine 2,3-aminomutase, putative [Nitrosococcus halophilus Nc4] Length = 446 Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust. Identities = 97/329 (29%), Positives = 148/329 (44%), Gaps = 49/329 (14%) Query: 42 VIANLINPHN-PNDPIARQFIPQKE--------------------------------ELN 68 VI LI+ N P+DPI + IPQ++ ELN Sbjct: 63 VINELIDWGNVPDDPIFQLTIPQRDMLAPEHFNRVASAIIRGADRKTLDAVIREVRAELN 122 Query: 69 ILPE-EREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125 P + ED I N ++G+ H+Y + +L VC YC FCFR K Sbjct: 123 PHPAGQMEDNIPTLNGERVEGLQHKYRETVLFFPSSGQVCHSYCTFCFRWAQFVGDKELK 182 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSR 183 +++K+T AY++ ++ +V+ TGGDPL++ + L+ L+ L HV+ +R ++ Sbjct: 183 IAAKETHQLQAYLRAHPEVTDVLVTGGDPLVMKTRNLRAYLEPLLGEAFSHVKTIRIGTK 242 Query: 184 VPIVDPQRI--------NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA--AISRLANA 233 PQR L + ++ AGK + + H NH E E AIA AI R+ Sbjct: 243 SLTFWPQRFVTDDDADDLLALFEEIQGAGKHLALMAHYNHWQEL-EPAIAREAIRRVRAT 301 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 G + SQ LL INDD I A L RT V L I PYY+ ++F + + + +I Sbjct: 302 GAQIRSQGPLLAHINDDANIWARLWRTQVGLGIIPYYMFVERDTGARNYFEVPLIKAWQI 361 Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKI 322 +K+SG+ + + GKV+I Sbjct: 362 YRDAIQKVSGIGRTARGPSMSAHPGKVEI 390 >gi|291301955|ref|YP_003513233.1| hypothetical protein Snas_4495 [Stackebrandtia nassauensis DSM 44728] gi|290571175|gb|ADD44140.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM 44728] Length = 432 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 62/249 (24%), Positives = 122/249 (48%), Gaps = 11/249 (4%) Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + G+ H+YP+ +L + C YC +CFR + ++S D +A + YI+ + Sbjct: 131 IPGMQHKYPETVLFFPQQGQTCHAYCTYCFRWAQFVGESDLKMASNDIDALVGYIKAHPE 190 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK 201 I V+ TGGD +I+ L++ ++ L ++ ++ +R ++ PQR +P+ L+ Sbjct: 191 ITSVLITGGDAMIMGAPVLRRYIEPLIQLEQLESIRMGTKALAYWPQRFVTDPDADDTLR 250 Query: 202 ------EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEIL 254 E+GK + H +H E + + A+ R+ + G ++ +Q+ L+K INDDP++ Sbjct: 251 LFEEVCESGKNLAFQAHFSHTRELAPTMLHDAVKRIRDTGAVIRTQAPLIKSINDDPQVW 310 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 +++ R + + PYY+ +F + + I ++SGLC+ + Sbjct: 311 SDMWRKHHTMGMVPYYMFVERDTGPQEYFAVPLARAYDIFQEAYSQVSGLCRTVRGPSMS 370 Query: 315 GGYGKVKID 323 GKV +D Sbjct: 371 ADPGKVAVD 379 >gi|134046377|ref|YP_001097862.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C5] gi|132664002|gb|ABO35648.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C5] Length = 594 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 92/355 (25%), Positives = 161/355 (45%), Gaps = 37/355 (10%) Query: 8 LTSAQDLYNANLIKKEQIDEIKE-ISNHYSIALTPVIANLINPHNPND---PIARQFIPQ 63 L + QDL + + + +I IK+ N +TP +L++ + + I Q IP Sbjct: 204 LETLQDLLD---LSESEISSIKKACENSIPFGITPYYVSLMDETSSREFDHAIRAQVIPP 260 Query: 64 KEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 ++ E R D +G+N+ SP+ + RYP ++K C C +C R + Sbjct: 261 TRYVDKTLESRTRGNSLDFMGENDTSPVDLVTRRYPMIAIMKPYETCAQICVYCQRNWQI 320 Query: 119 GS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 K + + A+ + + I EV+ TGGDP +L + L +L IKHV+ Sbjct: 321 KDVLSKDALAPKETVLNAIEWFKNHESIKEVLITGGDPALLDDEYLDWILSEFSQIKHVE 380 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLAN 232 +R +R+P+V PQRI ++ L + +P + ++ H H YE +++ A+S+L N Sbjct: 381 RIRIGTRIPVVLPQRITKNFVEILAKYNEPGIREIAVSTHVEHVYEITKDVQEAVSKLKN 440 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVEL-RIKPYYLHHPDLAAGTSHFRLTIEEGQ 291 G+ + +Q V + + + +R ++L I PYYL + T +R+ Sbjct: 441 KGMSVYNQQVF--TVENSRRFETSALRKVLKLIGIDPYYLFNTKGKDETIDYRVP----- 493 Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG--NGSYCITDHHNIV 344 I +L+E+ L GY + N+ K+G N +YC DH I+ Sbjct: 494 -IARALQERSEE-------ARLLPGYCRTDCTVFNVPKLGKNNLNYC-QDHDLIM 539 >gi|300786612|ref|YP_003766903.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32] gi|299796126|gb|ADJ46501.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32] Length = 456 Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust. Identities = 74/282 (26%), Positives = 135/282 (47%), Gaps = 21/282 (7%) Query: 54 DPIARQFIPQKEELNIL----PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 DPI R +P + + + P D + + ++G+ HRYP ++L +++ CP YC Sbjct: 110 DPIRRYMLPVRSDRDATWPSHPHSERDSLHEAEMWVVEGLTHRYPTKVLAEMISTCPQYC 169 Query: 110 RFCFRREMVGSQKGTVLSSKDT-------EAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C R ++VG+ TV K T +A +AY+++ + +V+ +GGD + +L Sbjct: 170 GHCTRMDLVGNSTETVEKHKLTLKPVDRQDAMIAYLKKTPGVRDVVVSGGDVANVPWPQL 229 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAG-----KPVYIAIHA--N 214 + L L I V+ +R ++ PQ + P++++ L+ + V +AIH N Sbjct: 230 ESFLMRLMDIDTVRDIRLATKALAALPQHWLQPKVVEGLERVAVTAQRRGVNLAIHTHVN 289 Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272 H + A N G+ + +Q VL++G+N P L +L E I PYY + Sbjct: 290 HAQSVTPLVAEAAQTALNVGVRDVRNQGVLMRGVNATPAALLDLCFALQGEANILPYYFY 349 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 D+ H+R+++ E Q++ S+ + G P + D+P Sbjct: 350 MCDMIPNAEHWRVSVWEAQELQHSIMGYLPGYATPRIVCDVP 391 >gi|302539601|ref|ZP_07291943.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family [Streptomyces hygroscopicus ATCC 53653] gi|302457219|gb|EFL20312.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family [Streptomyces himastatinicus ATCC 53653] Length = 362 Score = 109 bits (272), Expect = 8e-22, Method: Compositional matrix adjust. Identities = 75/233 (32%), Positives = 115/233 (49%), Gaps = 12/233 (5%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ---EKS 142 L+G+ Y +L++ +C +CR+C R G T LS +D E Y E Sbjct: 66 LRGVEKLYRRTLLVEPTTICAAHCRWCIR----GQYDTTTLSREDLEFIARYCGTAPENQ 121 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + EV+ TGGDPLIL R++ +L L + V+I+R +RVP+ DP+RI+ + L+ Sbjct: 122 DVREVLVTGGDPLILI-DRIEWLLDALEEHAPQVEIVRIATRVPLQDPRRIDARMKHALR 180 Query: 202 EAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 V +A H NH E E A + L AG + Q+VLL+G+ND+ + L L Sbjct: 181 RRSTFRVEVATHINHKGELFPEVREAYAALQEAGARIYDQTVLLRGLNDNLDTLVELFDE 240 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK--ISGLCQPFYIL 311 + I+ +YL H G H R ++ EG ++ L SG +P + L Sbjct: 241 LRHMDIEAHYLFHCVPIRGMDHHRTSVAEGLELHRRLGASGLTSGRTRPHFTL 293 >gi|110834678|ref|YP_693537.1| L-lysine 2,3-aminomutase [Alcanivorax borkumensis SK2] gi|110647789|emb|CAL17265.1| L-lysine 2,3-aminomutase, putative [Alcanivorax borkumensis SK2] Length = 462 Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 90/325 (27%), Positives = 143/325 (44%), Gaps = 44/325 (13%) Query: 42 VIANLINPHN-PNDPIARQFIPQKEEL---------------------NILPEERED--- 76 VI LIN N PNDPI + PQK L + E RE Sbjct: 75 VINELINWDNVPNDPIYQLTFPQKGMLAPEHFDKVADAMRGGDKTAIKTAIAEVREALNP 134 Query: 77 -PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVL 126 P G H+ ++GI H+Y + +L VC YC FCFR + Sbjct: 135 HPAGQMEHNIPEVDGEKIEGIQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKI 194 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 ++K+ YIQ +I +V+ TGGDPL++ K L+ ++ L ++ ++ +R S+ Sbjct: 195 ATKEAGQLKKYIQAHPEISDVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALT 254 Query: 187 VDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIIL 237 PQR+ +L+ +E +GK + + H NH E A A+ R+ G ++ Sbjct: 255 FWPQRVVSDADAKDLLHLFEEVIASGKHLALMAHYNHWQELQTNIAREAVKRVRATGAVI 314 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q LL IND+ + A L +T VEL I PYY+ +F + + + I Sbjct: 315 RAQGPLLAHINDNADDWARLWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWNIYRDA 374 Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322 +++SG+ + + GKV+I Sbjct: 375 MKQVSGIARTARGPSMSSHPGKVEI 399 >gi|194333979|ref|YP_002015839.1| radical SAM domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311797|gb|ACF46192.1| radical SAM domain protein [Prosthecochloris aestuarii DSM 271] Length = 433 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 88/350 (25%), Positives = 160/350 (45%), Gaps = 48/350 (13%) Query: 3 LRHKTLTSAQ--DLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIAR 58 L++++ T+A +L + EQI IK ++ Y + +A NLI+ P+DP+ R Sbjct: 2 LKYRSYTAANIHELPQYRALSDEQIHTIKTVATVYPFRINNHVAENLIDWSAVPDDPVFR 61 Query: 59 QFIPQK-----EELN---------------------ILPEEREDPIGDNN-HSP------ 85 PQ +E N I+ + +P G ++P Sbjct: 62 LSFPQAGMLQDKEFNDLSGLIRSGKDKTIIQRTARQIMLRQNPNPAGQMELNTPQLDGIA 121 Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G+ H+Y + +L VC YC +CFR ++ D ++Y++E + Sbjct: 122 LHGMQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLDNLKFANHDVSRLISYLKEHPE 181 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-------- 195 + ++IFTGGDP+++S + L+K ++ L I ++ +R ++ P R + Sbjct: 182 VKDIIFTGGDPMVMSSQLLRKYIEPLLKIPAIRTIRIGTKSLSWWPYRFTTDTDADDILR 241 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 L + + AGK + I H +HP E A+ AI+R+ + G ++ SQS +++ IND+ + Sbjct: 242 LFEKIVHAGKHLAIMAHISHPGEIENPAALDAITRIRSTGAVIRSQSPIVRYINDNAQTW 301 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 + + + L I PYY+ +F + + E I + K+SGL Sbjct: 302 EAMWQKQLHLGIIPYYMFLERDTGPKHYFDVPLHEALNIFNTAYRKMSGL 351 >gi|254427342|ref|ZP_05041049.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881] gi|196193511|gb|EDX88470.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881] Length = 463 Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust. Identities = 89/325 (27%), Positives = 144/325 (44%), Gaps = 44/325 (13%) Query: 42 VIANLINPHN-PNDPIARQFIPQKEELN---------------------ILPEERED--- 76 VI LIN N PNDPI + PQK L + E RE Sbjct: 75 VINELINWDNVPNDPIYQLTFPQKGMLAPEHFDKVAEAMRGGDKAEIKATIAEVREALNP 134 Query: 77 -PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVL 126 P G H+ + G+ H+Y + +L VC YC FCFR + Sbjct: 135 HPAGQMEHNMPEVDGEKIDGVQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKI 194 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 ++K+ YIQ +I +V+ TGGDPL++ K L+ ++ L ++ ++ +R S+ Sbjct: 195 ATKEAGQLKKYIQAHPEISDVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALT 254 Query: 187 VDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIIL 237 PQR+ +L+ +E +GK + + H NH E + A A+ R+ G ++ Sbjct: 255 FWPQRVVSDADAQDLLDLFEEVIASGKHLALMAHYNHWQELETDIAREAVKRVRATGAVI 314 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q LL IND+ + A L +T VEL I PYY+ +F + + + +I Sbjct: 315 RAQGPLLAHINDNADDWARLWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWEIYRDA 374 Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322 +++SG+ + + GKV+I Sbjct: 375 MKQVSGIARTARGPSMSSHPGKVEI 399 >gi|134045650|ref|YP_001097136.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5] gi|150403695|ref|YP_001330989.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C7] gi|132663275|gb|ABO34921.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5] gi|150034725|gb|ABR66838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C7] Length = 594 Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 22/276 (7%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEA 133 D +G+ + SP+ + RYP ++K C C +C R + K + + E Sbjct: 278 DFMGETDTSPVDLVTRRYPMIAIMKPYETCAQICVYCQRNWQIKDVFSKNALAKKESVEN 337 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 A+ + + I EV+ TGGDP ILS + L +L IKH++ +R +R P+V PQRI Sbjct: 338 AIEWFRNNESIKEVLLTGGDPGILSEEYLAYLLSEFSEIKHLERIRIGTRTPVVLPQRIT 397 Query: 194 PELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 E + L +P V ++ H H YE +++ A+S+L N GI + +Q V + + Sbjct: 398 DEFTEVLGHYNEPGIREVAVSTHIEHVYEVTKDLKDAVSKLKNNGIYVYNQQVFT--VEN 455 Query: 250 DPEILANLMRTFVEL-RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 + +R ++L I+PYYL + T ++R+ I + + KE+ Sbjct: 456 SRRFETSALRKALKLVGIEPYYLFNTKGKEETVNYRVPI---ARALQERKEEAR------ 506 Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 L GY + N+ K+G + H+++ Sbjct: 507 ----LLPGYCRTDSTVFNVPKLGKNNLNFYQDHDLI 538 >gi|312602176|ref|YP_004022021.1| lysine2,3-aminomutase [Burkholderia rhizoxinica HKI 454] gi|312169490|emb|CBW76502.1| LYSINE 2,3-AMINOMUTASE (EC 5.4.3.2) [Burkholderia rhizoxinica HKI 454] Length = 459 Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust. Identities = 73/260 (28%), Positives = 124/260 (47%), Gaps = 15/260 (5%) Query: 77 PIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134 PI D + G+ H+Y + +L C YC FCFR +G +K + Sbjct: 121 PILDGKR--MHGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMEGLKFDAKASNEL 178 Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI 192 +AY++ +++ +V+ TGGDPLI++ + L ++ L + H+Q +R ++ PQR Sbjct: 179 VAYLRRHTEVTDVLITGGDPLIMNTRSLADYIEPLLSPELAHIQNIRIGTKSVAYWPQRF 238 Query: 193 NPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVL 243 + L + + AGK + + H NHP E + A A+ R+ ++G L QS L Sbjct: 239 VTDKDADDLLWLFEKVVNAGKNLAVMGHYNHPVELRPDIAQKAVKRIVSSGATLRMQSPL 298 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 ++ INDD + A L T V L PYY+ +F+L + + +I + + +SG Sbjct: 299 IRHINDDAKAWAELWTTGVRLGAIPYYMFIERDTGPRQYFQLPLIKSYEIFQAAYQSVSG 358 Query: 304 LCQPFYILDLPGGYGKVKID 323 L + + GKV +D Sbjct: 359 LSRTVRGPSMSAFPGKVVVD 378 >gi|262045422|ref|ZP_06018445.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037251|gb|EEW38499.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 174 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 60/162 (37%), Positives = 88/162 (54%) Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221 L ++ L I HV+ LR HSR+PIV P RI L + + V + H NH E Sbjct: 7 LDWLMTQLEAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDG 66 Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281 E AA++ L AG+ LL+QSVLL+G+ND+ + LA+L + + PYYLH D G + Sbjct: 67 EFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAA 126 Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 HF ++ +E ++I+ L ISG P ++ G K +D Sbjct: 127 HFMVSDDEAREIMRELLTLISGYMVPKMAREIGGEPSKTPLD 168 >gi|237654137|ref|YP_002890451.1| hypothetical protein Tmz1t_3480 [Thauera sp. MZ1T] gi|237625384|gb|ACR02074.1| conserved hypothetical protein [Thauera sp. MZ1T] Length = 484 Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust. Identities = 83/307 (27%), Positives = 138/307 (44%), Gaps = 22/307 (7%) Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED---PIGDNNHSPLKG 88 S HY IA LI D + + LN P ++ P+ D + + G Sbjct: 116 SEHYE-----RIARLIEGDADKDALEAAIAEVRHALNPHPADQMQMNMPL-DEHGKRIDG 169 Query: 89 IVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 + H+Y + +L C YC FCFR K ++S + Y++ +++ + Sbjct: 170 LQHKYRETVLFFPSQGQTCHAYCSFCFRWAQFVGDKELRIASSEARVLHDYLRTHTEVTD 229 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQR-INPE-------L 196 ++ TGGDP+++ + L++ L+ L H+Q +R S+ P R + E L Sbjct: 230 LLVTGGDPMVMKTRHLREYLEPLLRPEFDHIQTIRIGSKALTFWPHRFLGAEDADDLMRL 289 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEILA 255 ++ L EAGK V + H NH E +A AAI R+ G ++ +Q L+ INDDP A Sbjct: 290 LRQLVEAGKHVALMAHYNHWKELETDAAHAAIRRIRATGAVIRAQGPLIAHINDDPAAWA 349 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 L +T V L + PYY+ +F + + +I +++SGL + + Sbjct: 350 RLWKTEVRLGLVPYYMFVERDTGARHYFEVPLARAWEIYQQAIQQVSGLARTARGPSMSA 409 Query: 316 GYGKVKI 322 GKV+I Sbjct: 410 SPGKVEI 416 >gi|149375732|ref|ZP_01893500.1| Radical SAM domain protein [Marinobacter algicola DG893] gi|149359857|gb|EDM48313.1| Radical SAM domain protein [Marinobacter algicola DG893] Length = 454 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 89/328 (27%), Positives = 144/328 (43%), Gaps = 47/328 (14%) Query: 42 VIANLINPHN-PNDPIARQFIPQ---------------------KEELNILPEERED--- 76 VI LI+ + PNDP+ + PQ K+E+ + +E D Sbjct: 61 VINELIDWNKVPNDPLYQLVFPQKGMLKDEHYERMAKMHREGAEKKEIQAVAKEIRDELN 120 Query: 77 --PIG-------DNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125 P G + N L G+ H+Y + +L C YC FCFR K Sbjct: 121 PHPAGQMEMNMPELNGEVLDGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLK 180 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSR 183 ++S + E Y+QE +++ +++ TGGDP+++ K L + L+ L H+Q +R ++ Sbjct: 181 MASTEAEKLHGYLQEHTEVSDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTK 240 Query: 184 VPIVDPQRINP--------ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234 P R +L L +AGK V I H NH E + + A AI RL G Sbjct: 241 ALTFWPYRFVTDKDADELIDLFARLVDAGKHVAIMAHYNHWQEITTDIAEEAIRRLRATG 300 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 + +Q L+K +ND+ + A L V+L I PYY+ ++F + + E I Sbjct: 301 AEIRAQGPLIKHVNDNADDWAKLWDKEVQLGIIPYYMFVERDTGAKNYFEVPLVEAFNIY 360 Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKI 322 +++SGL + + G GKV++ Sbjct: 361 REAIKQVSGLARTARGPSMSAGPGKVEV 388 >gi|238059077|ref|ZP_04603786.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149] gi|237880888|gb|EEP69716.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149] Length = 469 Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 80/308 (25%), Positives = 148/308 (48%), Gaps = 29/308 (9%) Query: 36 SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84 S+ + P + N + PH P DPI R IP ++ + P D + +++ Sbjct: 97 SMLVPPQMINTMVPHAPPTTEALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 156 Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAY 137 +G+ HRYP ++L +LL CP YC C R ++VG+ V K T +A +AY Sbjct: 157 VAEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHIAY 216 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196 ++ + +V+ +GGD + + L+ L L I+ ++ +R ++ + PQ + P++ Sbjct: 217 LKAHPGVRDVVVSGGDVANVPWRNLESYLMRLLEIETIRDVRLATKALMGLPQHWLQPDV 276 Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGIN 248 ++ L+ A + V +AIH NH + A + G+ + +Q VL++G+N Sbjct: 277 VEGLERVARTAARRGVNLAIHTHVNHRQSITPLVAKAAQTALDVGVRDVRNQGVLMRGVN 336 Query: 249 -DDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 P++L L R F + +I PYY + D+ H+R+ + Q++ + + G Sbjct: 337 ATAPDLLGPLFRPFRRKKKILPYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYAT 396 Query: 307 PFYILDLP 314 P + D+P Sbjct: 397 PRIVCDVP 404 >gi|119716886|ref|YP_923851.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614] gi|119537547|gb|ABL82164.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614] Length = 468 Score = 106 bits (265), Expect = 4e-21, Method: Compositional matrix adjust. Identities = 78/312 (25%), Positives = 142/312 (45%), Gaps = 33/312 (10%) Query: 36 SIALTPVIANLINPH----NPN--------DPIARQFIP----QKEELNILPEEREDPIG 79 S+ + P + N + PH P DP+ IP ++ + P D + Sbjct: 92 SMLVPPQMMNTMVPHEVPAGPGSLTEAFYADPVRHYMIPVFSDRRTDWPSHPHATRDSLH 151 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA------ 133 +++ +G+ HRYP ++L +LL CP YC C R ++VG+ T+ K Sbjct: 152 EHDMWVAEGLTHRYPTKVLAELLPTCPQYCGHCTRMDLVGNSTPTIDKLKFVAKPNDRLG 211 Query: 134 -ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 L Y++ Q+ +V+ +GGD L RL+ L L I++++ +R ++ + PQ Sbjct: 212 DMLDYLRRTPQVRDVVVSGGDVANLPWPRLEDFLTRLLEIENIRDIRLATKALVGLPQHW 271 Query: 193 NPELIQC--------LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVL 243 E ++ + G + I HANH + A + + AG+ + +Q VL Sbjct: 272 LQEDVRAGMARVAGTARSRGVSLAIHTHANHANSITPLVADATAAMFEAGVRDVRNQGVL 331 Query: 244 LKGINDDPEILANL-MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 L G+N P+ L +L R +I PYY + D+ + H+R+++ + Q++ + + Sbjct: 332 LNGVNAGPDALLDLCFRLLDGAQIMPYYFYMCDMIPFSEHWRVSVADAQRLQHHIMGYLP 391 Query: 303 GLCQPFYILDLP 314 G P + D+P Sbjct: 392 GFATPRIVCDVP 403 >gi|115380256|ref|ZP_01467274.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1] gi|310822788|ref|YP_003955146.1| hypothetical protein STAUR_5549 [Stigmatella aurantiaca DW4/3-1] gi|115362735|gb|EAU61952.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1] gi|309395860|gb|ADO73319.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 456 Score = 106 bits (264), Expect = 7e-21, Method: Compositional matrix adjust. Identities = 75/301 (24%), Positives = 145/301 (48%), Gaps = 22/301 (7%) Query: 36 SIALTPVIANLINPHN-PNDPIARQFIPQ-KEELNILP---EEREDPIGDNNHSPLKGIV 90 S+ L P + N +N + DP+ R +P + L P D + + ++G+ Sbjct: 90 SVLLPPQMLNTMNLEDLWGDPVRRYMLPAFADRLTTWPNHPRASRDSLHEAEMWVVEGLT 149 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-------KGTVLSSKDTEAALAYIQEKSQ 143 HRYP ++L ++L CP YC C R ++VG+ + ++ + E L Y++ Sbjct: 150 HRYPTKVLAEMLPTCPQYCGHCTRMDLVGNDVPQVEKHRFSIGPKERYEKMLDYLRRTPS 209 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCLK- 201 + +V+ +GGD L ++L+ + +L I +++ +R S+ + PQ + ++Q L Sbjct: 210 VRDVVVSGGDIANLPIQQLEPFVSSLMDIPNIRDIRLASKGLMGIPQHFLQDSVLQGLDR 269 Query: 202 ------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEIL 254 E G + + H NH + + A+ +L + G + +Q VLL+G+ND L Sbjct: 270 LAKKAVERGVDLALHTHVNHARQLTPLVGKAVRKLLDMGFRDVRNQGVLLRGVNDSAPAL 329 Query: 255 ANLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 +L T ++ +I PYY + D+ + H+RL++ + Q + + + G P + D+ Sbjct: 330 LDLCFTLLDHAKILPYYFYMCDMIPNSEHWRLSVAQAQTLQHDIMGYMPGFATPRIVCDV 389 Query: 314 P 314 P Sbjct: 390 P 390 >gi|182412197|ref|YP_001817263.1| radical SAM domain-containing protein [Opitutus terrae PB90-1] gi|177839411|gb|ACB73663.1| Radical SAM domain protein [Opitutus terrae PB90-1] Length = 468 Score = 105 bits (262), Expect = 9e-21, Method: Compositional matrix adjust. Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 13/255 (5%) Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + PL G+ H+Y D +L C YC +CFR +S+ E+ +AY++ Sbjct: 126 DGQPLSGMQHKYRDTVLFFPSPGQTCHTYCTYCFRWPQFVGLDELKFASRQAESLVAYLK 185 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE-- 195 E ++ V+FTGGDPL++ L++ ++ L ++H+ +R ++ P P R E Sbjct: 186 EHPEVSNVLFTGGDPLVMRTAVLRRYIEPLLSPELEHISAIRIGTKSPAWWPYRFVNEPD 245 Query: 196 ------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGIN 248 L ++ AG+ + I H + P E A AA+ R+ + G I+ Q+ L++ +N Sbjct: 246 SDDLLRLFDQVRAAGRHMAIMAHYSRPRELQTPVAQAALRRIKSTGAIVRCQAPLIRHVN 305 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 DD + A+L R V L PYY+ +F + + +I ++SGL + Sbjct: 306 DDADTWADLWRLQVRLGAVPYYMFVERDTGPKGYFEVPLARCYEIFQKAYRRVSGLERTV 365 Query: 309 YILDLPGGYGKVKID 323 + GKV ID Sbjct: 366 RGPSMSATPGKVIID 380 >gi|148252209|ref|YP_001236794.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1] gi|146404382|gb|ABQ32888.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1] Length = 485 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 15/267 (5%) Query: 84 SPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 + L+G+ H+Y + L K C YC FCFR ++D E AY++ + Sbjct: 155 ASLEGVQHKYDETALFFAKQGQTCHSYCSFCFRWPQFVDSAVDRFEARDGERLYAYLRTR 214 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQR--INPE-- 195 I +V+ TGGDP ++S +RL L+ L HV +R ++ PQR + E Sbjct: 215 RDITDVLLTGGDPFVMSSRRLADYLEPLLAPEFSHVTNIRIGTKALSYWPQRFYVGAEAE 274 Query: 196 ----LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250 L+ + ++GK V + H NH E + E + A+ L +G ++ +QS +L+ +NDD Sbjct: 275 ELNRLLVRVADSGKQVAVMAHVNHWRELTPEPVHRAVEALRRSGAVIRTQSPVLRHVNDD 334 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 + R V + + PYY+ +FR++++ I + +SG+C+ Sbjct: 335 VAVWRRNWRDQVAMGMIPYYMFVERDTGANHYFRISLDRALAIYQAAAAAVSGICRTARG 394 Query: 311 LDLPGGYGKVKIDTHNIKKVGNGSYCI 337 + G GK+ + +GN Y + Sbjct: 395 PVMSAGPGKIHVLGR--LAIGNDDYFV 419 >gi|77918358|ref|YP_356173.1| hypothetical protein Pcar_0744 [Pelobacter carbinolicus DSM 2380] gi|77544441|gb|ABA88003.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380] Length = 442 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 72/260 (27%), Positives = 122/260 (46%), Gaps = 15/260 (5%) Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G+ H+Y + +L +L C YC FCFR ++ + T Y++ S+ Sbjct: 121 LPGLQHKYRETVLFFPRLGQTCHSYCSFCFRWPQFVCERDMRIMGPRTPGLFDYLRRHSE 180 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------ 195 + +++ TGGDPL++ L + L+ L H+Q +R ++ P R + Sbjct: 181 VTDLLVTGGDPLVMKAASLAEFLEPLLSPEFAHLQTIRIGTKSLSFWPYRFLTDRDADDL 240 Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 L + L + GK + + H NH E +E A AI R+ G + +QS ++ +NDDP+ Sbjct: 241 LRLFERLVKGGKHLAVMAHYNHWRELETEVARRAIERVKATGATIRTQSPVVAHVNDDPQ 300 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 + L +T V L + PYYL +F + +E +I +K+SGL + Sbjct: 301 VWVRLWQTQVRLGMVPYYLFVARDTGARHYFAIPLERCWQIYRQAIQKLSGLARTVRGPS 360 Query: 313 LPGGYGKVKIDTHNIKKVGN 332 + G GKV+I + +VG Sbjct: 361 MSAGPGKVEI--QGVAEVGQ 378 >gi|227357432|ref|ZP_03841786.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906] gi|227162390|gb|EEI47390.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906] Length = 260 Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 58/172 (33%), Positives = 93/172 (54%), Gaps = 5/172 (2%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +PNDP+ Q + E + P DP+ D + + G++H+Y +R LL + C V CR Sbjct: 67 DPNDPLLLQVLTAHAEFTLTPGFSTDPL-DEQQNAVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFRR KG + + + A+ YI+ ++ E+IF+GGDPL+ L ++ L Sbjct: 126 YCFRRHFPYEDNKG---NKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQL 182 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221 I H++ LR HSR+P+V P RI L Q L+++ + +H NH E + Sbjct: 183 EAIPHIKRLRIHSRLPVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDD 234 >gi|197294893|ref|YP_002153434.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315] gi|195944372|emb|CAR56973.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315] Length = 466 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 73/254 (28%), Positives = 117/254 (46%), Gaps = 13/254 (5%) Query: 82 NHSPLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + P GI H+Y +L H C YC FCFR +S + AY++ Sbjct: 141 DGEPCPGIQHKYAQTVLYFPSHGQTCHAYCTFCFRWPQFVGDASLKFASSEAARLHAYLR 200 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI----- 192 ++ +++ TGGDP+++S RL++ L L ++HV +R ++ P R Sbjct: 201 AHGEVTDLLMTGGDPMVMSATRLREYLMPLLAPGLEHVGNIRIGTKALTYWPYRFVSDPD 260 Query: 193 NPELIQCLK---EAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGIN 248 PEL+ L+ +AG+ V + H NH E S E A A++ L G+++ SQ +L+ IN Sbjct: 261 TPELLALLRTLIDAGRNVTVMAHLNHWRELSTEVAEQAVTNLRRIGVVIRSQGPVLRHIN 320 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 DD E+ V L I PYY+ +F L + I + +SGL + Sbjct: 321 DDAEVWRRNWVGQVRLGIVPYYMFVERDTGPRGYFELPLARALDIYNTAIASVSGLARSA 380 Query: 309 YILDLPGGYGKVKI 322 + G GKV++ Sbjct: 381 RGPSMSAGPGKVEV 394 >gi|226946213|ref|YP_002801286.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ] gi|226721140|gb|ACO80311.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ] Length = 433 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 80/329 (24%), Positives = 146/329 (44%), Gaps = 47/329 (14%) Query: 42 VIANLINPHN-PNDPIARQFIPQKEELN----------ILPEERE--------------- 75 ++ LI+ N P+DPI R P K+ L IL + E Sbjct: 50 ILDELIDWGNIPDDPIFRLTFPHKDMLRESEFQELSNAILNQFNEAEIQSISNKIRFRMN 109 Query: 76 -DPIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125 +P G H+ P+ G+ H+Y + +L C YC FCFR Sbjct: 110 PNPAGQMTHNVPRMNGVPINGLQHKYKETVLFFPSAGQTCHSYCTFCFRWPQFVGMSSLR 169 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSR 183 ++ +E + Y++E ++ +V+ TGGDPL+++ + L + ++ L ++H++ +R ++ Sbjct: 170 FEARSSEPLVQYLKEHKEVTDVLITGGDPLVMNTRILYEFIRPLLIPELEHIKNIRIGTK 229 Query: 184 VPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234 PQR + L + + GK + + H NHP E + A A+ R+ G Sbjct: 230 SISYWPQRFVTDKDADDLLHLFEDIIATGKNLALMAHYNHPCEIKTKIAQIAVKRIVGTG 289 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 + + QS ++K IND+P+ +L T V+L PYY+ +++F + + +I Sbjct: 290 VTVRMQSPIIKHINDNPQAWVDLWTTGVQLGAIPYYMFVERDTGPSNYFEIPLVSAWEIF 349 Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKID 323 + +SGL + + GK+ +D Sbjct: 350 QKAYQSVSGLARTVRGPSMSTFPGKIMVD 378 >gi|313680789|ref|YP_004058528.1| l-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977] gi|313153504|gb|ADR37355.1| L-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977] Length = 432 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 64/248 (25%), Positives = 118/248 (47%), Gaps = 11/248 (4%) Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G+ H+Y + +L C YC +CFR + S + + Y++ + Sbjct: 129 LDGLQHKYAETVLFFPAGGQTCHAYCTYCFRWAQFVGDRELKFESSQVDDLVRYLRAHPE 188 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK 201 + +V+ TGGDP+++ + L + L+ L ++ ++ +R S+ P R +P+ + L+ Sbjct: 189 VTDVLVTGGDPMVMKTRLLARYLEPLLEVETLRTIRIGSKSLAYWPMRFTTDPDAAEVLR 248 Query: 202 ------EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEIL 254 AGK + H +HP E E + AAI L G ++ +Q+ L++ +NDD ++ Sbjct: 249 LFERVAAAGKQLAFMAHFSHPRELETEQVQAAIQNLLATGAVVRTQAPLIRHVNDDADVW 308 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 A R V L + PYY+ +F + + E Q+I A ++SGL + + Sbjct: 309 AEKWRREVRLGLIPYYMFVERDTGPKRYFEVPLAEAQRIFADAYRQVSGLARTVRGPSMS 368 Query: 315 GGYGKVKI 322 GKV++ Sbjct: 369 AFPGKVRV 376 >gi|296108845|ref|YP_003615794.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus infernus ME] gi|295433659|gb|ADG12830.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus infernus ME] Length = 589 Score = 105 bits (261), Expect = 1e-20, Method: Compositional matrix adjust. Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 11/279 (3%) Query: 6 KTLTSAQDLYNANLIKKEQIDEI-KEISNHYSIALTPVIANLIN---PHNPNDPIARQFI 61 K L +DL + I +E + + K I N+ A+TP +L + P+ + PI RQ I Sbjct: 200 KGLEILRDLKDIVKISEEDLTLLEKAIENNIPYAITPYYLHLFDFDQPYKYDLPIRRQVI 259 Query: 62 PQKEELNILP--EERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 P + +N++ E RE D +G+ + +P + I RY ++K CP C +C R M Sbjct: 260 PPEHYINMMANAESREVFDYMGELDTTPEELITRRYVTIAIMKPYESCPQICVYCQRNWM 319 Query: 118 VGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 + D E AL + +E + E++ TGGDPL LS ++K+++ ++ HV Sbjct: 320 IKDFGDKAFVGWDKVEKALKWFEEHESMIEILITGGDPLCLSDSSIKKIVERIKNFDHVI 379 Query: 177 ILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235 +RF +R + P RI L+ L K V ++ HA YE + E A+ L + I Sbjct: 380 GVRFGTRTLLTAPMRITESLLDVLSILKDKKVIVSTHAESSYEITPEVKRAVELLGSKNI 439 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 + +Q V + ++ E +A L ++ I PYY +P Sbjct: 440 RVYNQHVYHRYVSRRFENVA-LRIALRKVGIIPYYTFYP 477 >gi|15668815|ref|NP_247618.1| hypothetical protein MJ_0634 [Methanocaldococcus jannaschii DSM 2661] gi|2496087|sp|Q58051|Y634_METJA RecName: Full=Uncharacterized KamA family protein MJ0634 gi|1591346|gb|AAB98629.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 620 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 11/256 (4%) Query: 29 KEISNHYSIALTPVIANLINPHNP---NDPIARQFIPQKEELNILPEEREDP------IG 79 K + N LTP +L + NP + + RQ IP + + + E +ED +G Sbjct: 253 KAVKNGIPFGLTPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMG 312 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAYI 138 +++ SP+ + RY ++K CP C +C R MV + E AL + Sbjct: 313 EHDTSPIDLVTRRYVTIAIIKPYESCPQICVYCQRNWMVQDFDAKAFPGWEKVEKALDWF 372 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 E + E++ TGGDP LS K ++K+L + + HV +RF +R + P RI EL + Sbjct: 373 AEHDSMIEILITGGDPFSLSDKAIEKMLNRIAEMNHVVGVRFGTRTIVTAPMRITDELAE 432 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 L K + I+ H YE + E A+ +L I + +Q V + ++ E +A L Sbjct: 433 LLGSFEKSLMISTHVESCYEITPEVAEAVKKLRTNNIYIYNQHVFHRYVSRRFENVA-LR 491 Query: 259 RTFVELRIKPYYLHHP 274 ++ I PYY +P Sbjct: 492 IALKKVGIIPYYTFYP 507 >gi|1369901|dbj|BAA12848.1| yjeK [Buchnera aphidicola] gi|2827006|gb|AAC38098.1| 39-kDa hypothetical protein [Buchnera aphidicola] Length = 144 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 54/133 (40%), Positives = 77/133 (57%) Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P RI +L Q + + I H NHP E +E+ ++ +L + +ILL+ Sbjct: 1 IHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDSLLKLKKSNVILLN 60 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLK IND+ ILA L E I PYYLH D GTSHF ++ ++ + I++ L + Sbjct: 61 QSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVSNKKAKSIISDLMK 120 Query: 300 KISGLCQPFYILD 312 ISG P + D Sbjct: 121 MISGFLVPRLVFD 133 >gi|226327321|ref|ZP_03802839.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198] gi|225204539|gb|EEG86893.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198] Length = 174 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 88/162 (54%) Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221 L ++ L I H++ LR HSR+P+V P R+ L Q L+++ + +H NH E + Sbjct: 7 LDWLITQLEAIPHLKRLRIHSRLPVVIPARVTDALCQRLQQSRLQNIMVLHTNHANEMDD 66 Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281 A S+L A + LL+Q VLL+G+ND E+LA+L R + + PYYLH D G + Sbjct: 67 ALREACSKLKKANVTLLNQGVLLRGVNDSAEVLADLSRALFDAGVMPYYLHVLDKVQGAA 126 Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 HF + E ++I+ +L +SG P ++ G K +D Sbjct: 127 HFMVPDSEAREIMKALMSLVSGYMVPKLTREIGGEPSKTLLD 168 >gi|91772254|ref|YP_564946.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242] gi|91711269|gb|ABE51196.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242] Length = 441 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 89/368 (24%), Positives = 156/368 (42%), Gaps = 48/368 (13%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHN-PNDPIARQF 60 R TL++ +++ +EQ ++I + + + VI LIN N PNDP+ R Sbjct: 14 FRAYTLSNYKEIPQIQNFTQEQQEDIGIAARIFPFRVNNYVIDELINWDNVPNDPMFRLT 73 Query: 61 IPQKE--------------------------------ELNILPEEREDP-IGDNNHSPLK 87 P K+ LN P + D + + N L+ Sbjct: 74 FPNKDMLLPPHYKEMKHLLHTAASEEEVQQAIHKIRLTLNPHPAGQLDKNVPELNGKVLE 133 Query: 88 GIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 G+ H+Y + +L C +C FCFR K +S++ E ++Y+QE ++ Sbjct: 134 GMQHKYNETVLFFPTQGQTCHTFCTFCFRWAQFTGMKDLKFASREIETLVSYLQEHPEVK 193 Query: 146 EVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE-------- 195 +V+FTGGDP+ +S L++ ++ + I+ ++ +R ++ PQR + Sbjct: 194 DVLFTGGDPMTMSANLLKRYIEPILEADIRTIENIRIGTKSLSYWPQRFVSDKDSEDILS 253 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEIL 254 L + + K + I H NHP E + + + AI + G + +QS L+ INDDP I Sbjct: 254 LFSNVTDHNKHMAIMGHFNHPVELTTDTVKEAIKNIRATGAQIRTQSPLIAHINDDPVIW 313 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 + R V L PYY+ +F I + +I + +SGL + + Sbjct: 314 EQMWREQVRLGCIPYYMFMVRNTGANHYFDTPISKAWEIFQEAYQNVSGLARTVRGPSMS 373 Query: 315 GGYGKVKI 322 GK+ + Sbjct: 374 TDPGKINV 381 >gi|226312788|ref|YP_002772682.1| hypothetical protein BBR47_32010 [Brevibacillus brevis NBRC 100599] gi|226095736|dbj|BAH44178.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 421 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 9/240 (3%) Query: 74 REDPIGDNNH--SPLKGIVHRYPDRILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKD 130 R DP G+ ++ + H+Y +LL + C C+FC++ E+ G Sbjct: 83 RFDPYGNKSYRQDETAFLQHKYKKTLLLHIDDFCIANCQFCYKVNEIRHEDIGYTNIMDK 142 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDP 189 E A+ Y++ I V+FTGGDP L K++ TL +K ++++RF ++ DP Sbjct: 143 AERAVQYLEAHPYIDNVLFTGGDPASFRKTSDLIKLISTLLSVKSIRLVRFATKALAYDP 202 Query: 190 QR-INPELI----QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 R ++ EL+ Q + GK V + NHP E S+ +I A L + G+ + Q ++ Sbjct: 203 ARFLDGELLAFFDQVRQTPGKQVSVISQFNHPGEISDVSIQATQALLSVGVQIRGQPAII 262 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +G+ND E L +L R F++ RI YYL G + + ++E + VA K + GL Sbjct: 263 RGVNDSVETLIDLQRKFLDNRIISYYLTVFMPVRGVEQYAIPLDEAFRNVAESKRNLGGL 322 >gi|149924160|ref|ZP_01912537.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1] gi|149814961|gb|EDM74521.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1] Length = 407 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 74/276 (26%), Positives = 130/276 (47%), Gaps = 23/276 (8%) Query: 77 PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127 P G +H+ L+G+ H+Y + +L + C YC FCFR +G Sbjct: 75 PAGQRSHNVPTVDGRRLEGVQHKYRETVLFFPQQGQTCHAYCTFCFRWAQFVGLEGMKFE 134 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVP 185 S++ Y++ + +V+FTGGDP+++ + L++ ++ L + +H+ + R ++ Sbjct: 135 SREMADLTTYLRNNPAVTDVLFTGGDPMVMKTRVLRRYIEPLLHPDFEHINV-RIGTKSV 193 Query: 186 IVDPQRI-----NPELIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGII 236 PQR EL+ +E +G+ + + H NHP E E A A++R+ + G Sbjct: 194 SYWPQRYVSDDDADELLALFEEVSASGRHLALMAHYNHPRELQTEVAQRAVARIRSTGAQ 253 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 + QS L++ IND PE A L RT V+L PYY+ ++F + + +I Sbjct: 254 IRIQSPLIRRINDAPETWAELWRTGVKLGCIPYYMFVERDTGPRNYFEVPLARAWEIFGD 313 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332 ++SGL + + GKV +D + KV Sbjct: 314 AYRQVSGLARTVRGPSMSTMPGKVLVD--GVAKVAG 347 >gi|289192520|ref|YP_003458461.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp. FS406-22] gi|288938970|gb|ADC69725.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp. FS406-22] Length = 620 Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 120/256 (46%), Gaps = 11/256 (4%) Query: 29 KEISNHYSIALTPVIANLINPHNP---NDPIARQFIPQKEELNILPEEREDP------IG 79 K + N +TP +L + NP + + RQ IP + + + E +ED +G Sbjct: 253 KAVKNGIPFGITPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMG 312 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAYI 138 +++ SP+ + RY ++K CP C +C R MV + E AL + Sbjct: 313 EHDTSPIDLVTRRYVTIAIIKPYESCPQICVYCQRNWMVQDFSEKAFPGWEKVEKALDWF 372 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 E + E++ TGGDP LS K ++K+L + + HV +RF +R + P RI EL + Sbjct: 373 AEHDSMIEILITGGDPFSLSDKAIEKMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAE 432 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 L K V I+ H + YE + E A+ +L I + +Q V + ++ E +A L Sbjct: 433 LLGSFEKSVMISTHVENCYEITPEVKEAVKKLRTNNIYVYNQHVFHRYVSRRFENVA-LR 491 Query: 259 RTFVELRIKPYYLHHP 274 ++ I PYY +P Sbjct: 492 IALKKVGIIPYYTFYP 507 >gi|317124916|ref|YP_004099028.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043] gi|315589004|gb|ADU48301.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043] Length = 483 Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust. Identities = 73/282 (25%), Positives = 130/282 (46%), Gaps = 21/282 (7%) Query: 54 DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 DPI R +P ++ + P D + +++ +G+ HRYP ++L +LL CP YC Sbjct: 111 DPIRRYMLPVFSDRRTDWPSHPFSSRDSLHEHDMWVAEGLTHRYPTKVLAELLPTCPQYC 170 Query: 110 RFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C R ++VG+ V K +A LAY++ + +V+ +GGD + K L Sbjct: 171 GHCTRMDLVGNSTPQVNKLKFDLKPVDRYDAMLAYLRNTPSVRDVVVSGGDVANMPWKNL 230 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--------QCLKEAGKPVYIAIHAN 214 + L L I +++ +R ++ + PQ + + + G + I H N Sbjct: 231 ESFLDRLLEIDNIRDIRLATKALMGLPQHWFADDVVEGVARVAATARARGVSLAIHTHVN 290 Query: 215 HPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLH 272 + + A + AG+ + +Q VL++GIND E L +L + I PYY + Sbjct: 291 NAQSVTPAVARASRAMLEAGVRDVRNQGVLMRGINDSTEQLLDLCFALADGASITPYYFY 350 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 D+ H+RL++ E Q++ S+ + G P + D+P Sbjct: 351 MCDMIPFAEHWRLSLAEAQRLQHSIMGYLPGFATPRIVCDVP 392 >gi|6729659|emb|CAB67710.1| hypothetical protein [Streptomyces rochei] Length = 403 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 132/292 (45%), Gaps = 22/292 (7%) Query: 53 NDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108 +DP+ R +P + + P D + + + ++G+ HRYP ++L +LL CP Y Sbjct: 56 DDPVRRYMMPVMSDRHPQWPSHPMASRDSLHEQDMWVVEGLTHRYPTKVLAELLSTCPQY 115 Query: 109 CRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C C R ++VG+ V S+ + LA+++ I +V+ +GGD + R Sbjct: 116 CGHCTRMDLVGNSTPQVTKSRLQLKPVDRADRILAHLRVSPGIRDVVVSGGDLANMPWPR 175 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGKPVYIAIHA 213 L++ L L I ++ +R S+ I PQ N + + + G + + HA Sbjct: 176 LERFLDDLLEIDSIRDIRLASKALIGLPQHWNSGPLLEGVARIARKARSRGVRIALHTHA 235 Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYL 271 N + + A L +AG+ + +Q VL++G+ND L +L + I PYY Sbjct: 236 NAAQQVTPAVARAAWALLDAGLHDVRNQGVLMRGVNDSAHDLLDLCFALTDHAGITPYYF 295 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + D+ H+R+ + Q I + + G P + D+P GK +D Sbjct: 296 YMCDMIPNAEHWRVPLHRAQLIQRQIMGYLPGFATPRIVCDVPMA-GKRWVD 346 >gi|261402967|ref|YP_003247191.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus vulcanius M7] gi|261369960|gb|ACX72709.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus vulcanius M7] Length = 621 Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust. Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 11/256 (4%) Query: 29 KEISNHYSIALTPVIANLINPHNP---NDPIARQFIPQKEELNILPEEREDP------IG 79 K + N LTP +L + NP + + RQ IP + + + E +ED +G Sbjct: 254 KAVKNGIPFGLTPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMIEHKEDRDTAFDFMG 313 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYI 138 +++ SP+ I RY ++K CP C +C R MV + E AL + Sbjct: 314 EHDTSPIDLITRRYVTIAIVKPYESCPQICVYCQRNWMVQDFDAKAFKGWEKIEKALDWF 373 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 E + E++ TGGDP LS K ++++L + + HV +RF +R + P RI EL + Sbjct: 374 AEHDSMIEILITGGDPFSLSDKAIERMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAE 433 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 L K + I+ H YE + E A+ +L I + +Q V + ++ E +A L Sbjct: 434 LLGSFEKRIMISTHVESCYEITPEVKDAVEKLNKNKIYVYNQHVFHRYVSRRFENVA-LR 492 Query: 259 RTFVELRIKPYYLHHP 274 ++ I PYY +P Sbjct: 493 IALKKVGIIPYYTFYP 508 >gi|152990665|ref|YP_001356387.1| hypothetical protein NIS_0919 [Nitratiruptor sp. SB155-2] gi|151422526|dbj|BAF70030.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 425 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 72/269 (26%), Positives = 121/269 (44%), Gaps = 13/269 (4%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGT 124 +N P +++ + N L G H+Y + IL K C YC FCFR Sbjct: 101 MNPHPADQKSNVPTINDKELTGSQHKYKETILFFPKQGQTCHAYCSFCFRWPQFTGMNEL 160 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHS 182 + K+ + + YI+ I ++IFTGGDPLI+S K L+ ++ + I H+Q +RF + Sbjct: 161 KFAMKEVDLLIEYIKAHPTITDLIFTGGDPLIMSTKLLRSYIEPILKADIPHLQNIRFGT 220 Query: 183 RVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANA 233 + P R + L + + E G + H NH E ++E A+ R+ Sbjct: 221 KTLGFWPYRFLTDSDADDLLKLFEEIVEHGYHLAFMAHFNHYRELQTDEVEKAVKRIQQT 280 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 G I+ +Q+ +L+ IND E+ + R V + + PYY+ +F + + E KI Sbjct: 281 GAIIRTQAPILRHINDSSEVWEKMWRKQVHMGMVPYYMFIARDTGAQHYFGVPLVEAWKI 340 Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKI 322 +SGL + + GK+ + Sbjct: 341 FKDAISNVSGLARTVRGPSMSAAPGKIAV 369 >gi|251799361|ref|YP_003014092.1| hypothetical protein Pjdr2_5396 [Paenibacillus sp. JDR-2] gi|247546987|gb|ACT04006.1| conserved hypothetical protein [Paenibacillus sp. JDR-2] Length = 336 Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust. Identities = 72/248 (29%), Positives = 131/248 (52%), Gaps = 26/248 (10%) Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q +L +AYI E ++I +V+ TG D L+L +L +++ LR I+H+ +R Sbjct: 75 QSMVLLPVSQAAEGIAYIAEHNEIHKVVLTG-DSLMLGIAKLTSIIEQLRDIEHIGTIRL 133 Query: 181 HSRVPIVDPQRINPE--LIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGI 235 SR+P+ +P RI + L++ L + P +Y+ NHP E + EA A + L AG+ Sbjct: 134 DSRMPVHNPMRIYEDHALLKMLSQFSSPEKRIYLMTTINHPRELTAEAKKAFNALHQAGV 193 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY--LHHPDLAAGTSHFRLT-----IE 288 ++L+Q+ ++KG+N+DP +L L+ + + PY ++ P+ + S L ++ Sbjct: 194 VVLNQTPIVKGVNNDPLLLGKLIDQLSQAGVSPYSFIINRPNSSYPESSLSLQTQFSIVQ 253 Query: 289 EGQKIVASLKEKISGLCQPFY----ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 + +++ A L ++I L Y +LD+ GG VK H+ ++ G G + I+ Sbjct: 254 QAKELTAELGKRIRLLMAHDYGKVELLDIEGGKAYVKY--HHYQEEGKGRF-------IM 304 Query: 345 HDYPPKSS 352 D PP++S Sbjct: 305 LDCPPEAS 312 >gi|315229952|ref|YP_004070388.1| lysine 2,3-aminomutase [Thermococcus barophilus MP] gi|315182980|gb|ADT83165.1| lysine 2,3-aminomutase [Thermococcus barophilus MP] Length = 647 Score = 102 bits (255), Expect = 6e-20, Method: Compositional matrix adjust. Identities = 83/290 (28%), Positives = 137/290 (47%), Gaps = 21/290 (7%) Query: 4 RHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSI--ALTPVIANLI---NPHNPNDPI 56 R K L + ++L ++K +E + ++ EI+ Y I +TP +L NP+ + + Sbjct: 247 REKGLETLRELNELGIVKVPEEDLKQV-EIAVKYGIPWGITPYYLHLWDFENPYKEDRHV 305 Query: 57 ARQFIPQKEELNILPEEREDP------IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 RQ +P ++ + + RED +G+++ SPL I RY +LK CP C Sbjct: 306 RRQVMPPTWYVSNMLQHREDREYYFDFMGEHDTSPLDLITRRYVTIAILKAYDTCPQICV 365 Query: 111 FCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 +C R V G+ EAA+ + E + +V+ TGGDPL LS K + K++ Sbjct: 366 YCQRNWEVLEPFMAGSFPGWDKIEAAIEWFGEHESMLDVLITGGDPLALSDKIIDKIMSR 425 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAI 224 L HV +R+ SR+ + P RI L + L +P V I+ H YE + E Sbjct: 426 LSEFDHVVNIRWGSRIFVTVPMRITNSLAEILGSYIEPGKRNVSISTHFETAYEVTPEVA 485 Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 A ++ GI + +Q V + ++ E +A L ++ I PYY +P Sbjct: 486 EATYKIRRQGIYIYNQLVYQRNVSRRFENVA-LRIALRKVGIDPYYTFYP 534 >gi|156938169|ref|YP_001435965.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis KIN4/I] gi|156567153|gb|ABU82558.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis KIN4/I] Length = 621 Score = 102 bits (255), Expect = 7e-20, Method: Compositional matrix adjust. Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 13/246 (5%) Query: 72 EERE---DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE--MVGSQKGTVL 126 +ERE D +G+++ SP I RYP +LK H CP C +C R M K + Sbjct: 296 DEREYYFDFMGEHDTSPHPLITRRYPMVAILKAAHTCPQICVYCQRNWEIMTAMDKEAIP 355 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + A+ + E I +V+ TGGDP IL + ++ ++K L + HV+++RF +R P+ Sbjct: 356 TRMTIDEAIDWFAEHPNIIDVLVTGGDPFILRDEDIEHIVKRLSELDHVKMIRFGTRTPV 415 Query: 187 VDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 P RI PE + L +P +++ H H YE + E A++ L I + +Q V Sbjct: 416 TVPMRITPEFAEMLGSYIEPGKRNIHVVTHVEHAYEVTPEMAEAVTNLRKNKIYVYNQQV 475 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 + E A L + I PYY +P T + + + +I+ KE+ Sbjct: 476 FTFWNSRRFETSA-LRIALKSIGIDPYYTFYPKGKWETKDYLVPV---ARILQERKEEAR 531 Query: 303 GLCQPF 308 L F Sbjct: 532 VLPGTF 537 >gi|253989648|ref|YP_003041004.1| hypothetical protein PAU_02168 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781098|emb|CAQ84260.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 384 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 10/275 (3%) Query: 55 PIARQFIPQKEELNIL-PEEREDPIGDNNHSPLKG---IVHRYPDRILLKLLHVCPVYCR 110 P+ R P KE L + P E + D + P I+ +Y +R L C +C+ Sbjct: 62 PLHRMVYPTKERLLVCAPGEVAYFVDDRENMPEDAPGNIIQKYRNRALFMPTSTCVSHCQ 121 Query: 111 FCFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 +CFR++++ Q G + K +Y+ I EVI +GGDP+ L + LQ ++ Sbjct: 122 YCFRQDVLSEQHETGKTVLDKAILELDSYLSMHPDIQEVILSGGDPMTLPMESLQSIISA 181 Query: 169 LRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227 ++ V+ +R H++ PQ + E ++ L AG V + H HPYE E I Sbjct: 182 IKSHAQVKSIRIHTKTISYFPQVFKSDEKLRLLASAG--VRLVFHLTHPYELCEVVRKTI 239 Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287 R+ + GI +Q +L+ IND PE+L ++T L I+ + PD ++ F +++ Sbjct: 240 KRIQDTGIRCYNQFPILRQINDHPEVLRRHLKTLDCLGIRNLSVFIPDPINFSALFSISL 299 Query: 288 EEGQKIVASLKEKI-SGLCQPFYILDLPGGYGKVK 321 + I+ L + S + +++D G +V+ Sbjct: 300 ARLRNIINELNWRSPSWINSTRFVMDTKVGKVRVR 334 >gi|224007663|ref|XP_002292791.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana CCMP1335] gi|220971653|gb|EED89987.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana CCMP1335] Length = 533 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 16/253 (6%) Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G+ H+Y + +L+ C YC +CFR + K+ ++ Y+ + + Sbjct: 214 LTGVQHKYSETVLVFPSAGQTCHAYCTYCFRWAQFIGDDELRFAQKEAKSLFDYLSKHEE 273 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINP-----E 195 + +++ TGGDP+++ K L + L+ L ++ H++ +R +R PQR E Sbjct: 274 VSDILMTGGDPMVMKTKSLARYLEPLTDPNFLPHIKNIRIGTRSLSFWPQRFTTDDDADE 333 Query: 196 LIQCLK----EAGKPVYIAIHANHPYEFSEEAI-AAISRL-ANAGIILLSQSVLLKGIND 249 +I+ L+ E G+ V + H +H E S + + AAI R+ A + SQS +++GIND Sbjct: 334 VIELLRRVREEGGRHVAVMAHLSHARELSTDKVKAAIQRIQKEAFATIRSQSPVMRGIND 393 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309 ++ A RT V + I PYY+ F + + KI + SGL + Sbjct: 394 SSDVWAEKWRTEVNMGIIPYYMFLARDTGAQQFFDVPMATAHKIYSDALRNCSGLIRTAR 453 Query: 310 ILDLPGGYGKVKI 322 + GKV++ Sbjct: 454 GPSMSCTPGKVEV 466 >gi|270264523|ref|ZP_06192789.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13] gi|270041659|gb|EFA14757.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13] Length = 449 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 67/260 (25%), Positives = 125/260 (48%), Gaps = 15/260 (5%) Query: 77 PIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134 PI DN PL G+ H+Y + +L C YC FCFR +++++ Sbjct: 118 PILDN--EPLSGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMDELKFEARNSQML 175 Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI 192 + Y++ +++ +++ TGGDP+I++ + L ++ L + H++ +R ++ PQR Sbjct: 176 VEYLKRHTEVTDILITGGDPMIMNARALGDYIRPLLVPELSHIKNIRIGTKSVSYWPQRY 235 Query: 193 -----NPELIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVL 243 ++++ +E +G+ + + H NHP+E E A A+ R+ + G + QS L Sbjct: 236 LTDKDADDVLRIFEEVVASGRNLALMAHYNHPHEIQPEVAQRALKRIISTGATVRMQSPL 295 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 ++ IND+P+ A L T V L PYY+ +F + + +I + +SG Sbjct: 296 IRHINDNPKDWATLWTTGVRLGAIPYYMFVERDTGPNDYFGMPLIRAWEIFQEAYKSVSG 355 Query: 304 LCQPFYILDLPGGYGKVKID 323 L + + GK+ ID Sbjct: 356 LARTVRGPSMSAFPGKIMID 375 >gi|150249481|gb|ABR67759.1| CmnP [Saccharothrix mutabilis subsp. capreolus] Length = 448 Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/308 (25%), Positives = 139/308 (45%), Gaps = 29/308 (9%) Query: 36 SIALTPVIANLINPHNPND--------PIARQFIPQKE----ELNILPEEREDPIGDNNH 83 S+ L P + N + P D P+ R +P + E P D + + Sbjct: 76 SMLLPPQMLNTMVPEGAADFTGAFYADPVRRYMLPVRSDRDPEWPSHPYSSRDSLHEAEM 135 Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALA 136 ++G+ HRYP ++L +L+ CP YC C R ++VG+ V K + L Sbjct: 136 WVVEGLTHRYPTKVLAELVSTCPQYCGHCTRMDLVGNSTPQVRKHKLELKPVDRQDRMLD 195 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPE 195 Y++ + +V+ +GGD + +L+ L L I+ V+ +R ++ PQ + P+ Sbjct: 196 YLRRTPAVRDVVVSGGDVANVPWPQLESFLARLLEIETVRDIRLATKALAGLPQHWLQPQ 255 Query: 196 LIQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGI 247 +++ + A + V +A+H NH + A L +AG+ + +Q VL++G+ Sbjct: 256 VVEGMSRVARTAASRGVNLAVHTHVNHAQSVTPLVAEAARALLDAGVRDVRNQGVLMRGV 315 Query: 248 NDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 N P+ L L E I PYY + D+ H+R ++ E Q + A++ + G Sbjct: 316 NATPDDLLELCFALQGEANILPYYFYLCDMIPNAEHWRTSVAEAQDLQAAIMGYLPGYAT 375 Query: 307 PFYILDLP 314 P + D+P Sbjct: 376 PRIVCDVP 383 >gi|293393237|ref|ZP_06637552.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582] gi|291424383|gb|EFE97597.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582] Length = 174 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 56/162 (34%), Positives = 88/162 (54%) Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221 L ++ L I H++ LR HSR+P+V P R+ L Q L + V + H NH E Sbjct: 7 LDWLIGELEAIPHLKRLRIHSRLPVVIPARVTEALCQRLAASRLQVLMVTHINHANEIDA 66 Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281 ++++L AG+ LL+QSVLL+ INDD + LA L + I PYY+H D G + Sbjct: 67 ALSTSMAQLRRAGVTLLNQSVLLRHINDDADTLAALSNALFDAGILPYYIHVLDKVQGAA 126 Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 HF ++ ++ ++I+ +L K+SG P ++ G K +D Sbjct: 127 HFMVSDDQAREIMKALLSKVSGYLVPRLTREIGGEPSKTPLD 168 >gi|302527347|ref|ZP_07279689.1| CmnP protein [Streptomyces sp. AA4] gi|302436242|gb|EFL08058.1| CmnP protein [Streptomyces sp. AA4] Length = 463 Score = 101 bits (252), Expect = 1e-19, Method: Compositional matrix adjust. Identities = 77/311 (24%), Positives = 140/311 (45%), Gaps = 32/311 (10%) Query: 36 SIALTPVIANLINPHNPNDP-----------IARQFIPQKEELNIL----PEEREDPIGD 80 S+ L P + N + PH DP I R +P + + + P D + + Sbjct: 88 SMLLPPQMINTMAPHAGTDPAKVTEAFYADPIRRYMLPVRSDRHPAWPSHPHAERDSLHE 147 Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAA 134 ++G+ HRYP ++L +++ CP YC C R ++VG+ + L D + A Sbjct: 148 AEMWVVEGLTHRYPTKVLAEMISTCPQYCGHCTRMDLVGNSTEQIEKHKLALKPVDRQDA 207 Query: 135 LA-YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-I 192 + Y++ + +V+ +GGD + +L+ L L I+ V+ +R ++ PQ + Sbjct: 208 MTDYLKRTPGVRDVVVSGGDVANVPWPQLESFLMRLMDIETVRDIRLATKALAALPQHWL 267 Query: 193 NPELIQCLKEA-----GKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLL 244 P++ + L+ + V +AIH NH + A G+ + +Q VL+ Sbjct: 268 QPKVTEGLQRVALTAQARGVNLAIHTHVNHAQSVTPLVAEAARTALQVGVRDVRNQGVLM 327 Query: 245 KGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 +G+ND P L +L E I PYY + D+ H+R+ + E Q++ S+ + G Sbjct: 328 RGVNDTPAALLDLCFALQGEANILPYYFYMCDMIPNAEHWRVAVWEAQELQHSIMGYLPG 387 Query: 304 LCQPFYILDLP 314 P + D+P Sbjct: 388 YATPRIVCDVP 398 >gi|219117417|ref|XP_002179503.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409394|gb|EEC49326.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 470 Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 75/293 (25%), Positives = 133/293 (45%), Gaps = 23/293 (7%) Query: 50 HNPNDPIA--RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVC 105 H DP+ + +E+LN P +++ + L G+ H+Y + +L+ C Sbjct: 114 HKAGDPVKLIKTVAEIREDLNPHPAGQKE-LNAPKEDKLTGVQHKYSETVLVFPAAAQTC 172 Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 YC +CFR + K+ + Y+ E ++ +++ TGGDP+I+ K L + Sbjct: 173 HAYCTYCFRWAQFIGDDELRFAQKEATSLFEYLAEHEEVSDILMTGGDPMIMKTKSLAQY 232 Query: 166 LKTL---RYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEAG-KPVYIAIHA 213 L+ L ++ H++ LR +R PQR EL + ++E G + + I H Sbjct: 233 LEPLTDPNFLPHIKNLRIGTRSLSFWPQRFTTDDDADECIELFRRVREQGNRHIAIMAHL 292 Query: 214 NHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 H E S ++A+ I + A A I SQS +++G+NDD E+ A R V++ I PY Sbjct: 293 GHDRELSTDKFQDAVNRIQKEAYATI--RSQSPIMRGVNDDAEVWARKWRKEVQMGIIPY 350 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 Y+ +F + + K+ + SGL + + GKV++ Sbjct: 351 YMFMARDTGAQQYFDVPLVRAHKLYSDAIRNCSGLIRTARGPSMSCTPGKVEV 403 >gi|330508808|ref|YP_004385236.1| KamA family protein [Methanosaeta concilii GP-6] gi|328929616|gb|AEB69418.1| KamA family protein [Methanosaeta concilii GP-6] Length = 582 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 80/291 (27%), Positives = 136/291 (46%), Gaps = 26/291 (8%) Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEIS------NHYSIALTPVIANLIN--PHN 51 Q RH +D+ IK+ ++DE E S NH +TP +L++ P + Sbjct: 180 WQFRH----VFKDIQGLETIKRAIKLDEEHEASIRLALENHVPFGVTPHYLHLMDKEPSD 235 Query: 52 PNDPIARQFIPQKEELNILPEEREDP------IGDNNHSPLKGIVHRYPDRILLKLLHVC 105 + + RQ P + + R+D + + + SP+ I RYP ++K C Sbjct: 236 MDYAVRRQVFPPLSYVENMIAHRKDKKWAFDFMRERDTSPIDLITRRYPRVAIVKPYESC 295 Query: 106 PVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 P C +C R + S + + EAA+ + E ++ +V+ TGGDPL++ + Sbjct: 296 PQICVYCQRNWEISSPLMASALAPMEKIEAAIDWFYEHEEMMDVLLTGGDPLVMDDSLID 355 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL---KEAGKP-VYIAIHANHPYEF 219 ++L L I H++ +R SR P PQR+ EL + L +E G+ + + H HPYE Sbjct: 356 RILNRLSQIPHLKSIRVASRTPATVPQRLTEELCEILGSYQELGRRNLCLVTHFMHPYEV 415 Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 + E +AAI R+ GI + +Q V + E ++L ++ + PYY Sbjct: 416 TPETLAAIIRVKKTGIEIYNQQVFTFANSRKFET-SSLRIILKQIGVDPYY 465 >gi|238027720|ref|YP_002911951.1| hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1] gi|237876914|gb|ACR29247.1| Hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1] Length = 454 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 69/265 (26%), Positives = 120/265 (45%), Gaps = 18/265 (6%) Query: 77 PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLS 127 P G H+ PL G+ H+Y + +L C YC FCFR + + Sbjct: 108 PAGQMTHNVPMLDGRPLPGLQHKYAETVLFFPAAGQTCHAYCSFCFRWPQFIGAEDMKFN 167 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 +++++ Y++ ++ +V+ TGGDP++++ + L ++ L I H+Q +R ++ Sbjct: 168 ARESDELSRYLRLHPEVTDVLITGGDPMVMNAESLAGYIEPLLAIPHLQNIRIGTKSVAY 227 Query: 188 DPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILL 238 PQR + L + + GK + + H NHP E E A A+ R+ G + Sbjct: 228 WPQRFVTDKDADAVLRLFERVVAHGKNLSVMAHYNHPAELRPEIARRAVKRIIGTGATVR 287 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 QS +++ IND E L T V L PYY+ +F L + + I + Sbjct: 288 MQSPIVRHINDSAETWQELWTTGVRLGAIPYYMFVERDTGPQRYFELPLVDAYHIFRNAY 347 Query: 299 EKISGLCQPFYILDLPGGYGKVKID 323 +++SGL + + YGKV +D Sbjct: 348 QRVSGLSRTVRGPSMSTLYGKVLVD 372 >gi|90423562|ref|YP_531932.1| radical SAM family protein [Rhodopseudomonas palustris BisB18] gi|90105576|gb|ABD87613.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18] Length = 480 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/312 (25%), Positives = 139/312 (44%), Gaps = 47/312 (15%) Query: 42 VIANLINPHN-PNDPIARQFIPQK--------EELNILPEERED---------------- 76 V+ NLI+ P+DPI + PQ+ +++ L E +D Sbjct: 55 VVENLIDWSRVPDDPIFQLVFPQRGMLSEVDFDDVRTLVESSDDSEALARAVERIRRRLN 114 Query: 77 --PIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125 P G H+ PL G+ H+Y + ++ C YC +CFR +G Sbjct: 115 PHPGGQLTHNTATLAGRPLPGVQHKYRETVVFFPAQGQTCHAYCTYCFRWAQFVGMQGMR 174 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSR 183 + ++ T +AY++ +I +V+ TGGDP+I++ + L++ ++ L + H+Q +R ++ Sbjct: 175 IETRSTSELVAYLRAHPEITDVLITGGDPMIMATRTLRRYIEPLLVPELSHIQNIRIGTK 234 Query: 184 VPIVDPQRI--NPELIQCLK------EAGKPVYIAIHANHPYEFSEE-AIAAISRLANAG 234 P R + + CL+ A + + I H HP E A AI R+ + G Sbjct: 235 SVAYWPHRFVSDADADDCLRLFEEVAAANRHLAIMGHYTHPVELHPALAREAIRRIRDTG 294 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 + Q+ L++ +ND PE+ + L RT V L + PYY+ +F + + +I Sbjct: 295 AQIRMQAPLIRHVNDAPELWSELWRTGVRLGLIPYYMFIERDTGPRDYFSVPLVRAHEIF 354 Query: 295 ASLKEKISGLCQ 306 +SGL + Sbjct: 355 RRAAANVSGLAR 366 >gi|224370563|ref|YP_002604727.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum HRM2] gi|223693280|gb|ACN16563.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum HRM2] Length = 819 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 16/229 (6%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 +A Q++P KEELN + IG + L+ + Y +R++ L CPVYCRFCFR+ Sbjct: 170 VACQYLPFKEELNSVGHTNT-WIGQFHQGLLEQM---YQNRVIFLLNMTCPVYCRFCFRK 225 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 S+ D A+A+++ I E++ TGGDP I + +++ ++ L+ I HV Sbjct: 226 HK-DSRNEKNPGVDDVSKAVAHVKNSPAIKEIVITGGDPFI-NRNNMERAIQELKEIDHV 283 Query: 176 QILRFHSRVPIVDPQ---RINPELIQCLK-------EAGKPVYIAIHANHPYEFSEEAIA 225 + LR +R PQ + N + LK + GK + +A H HP E S ++++ Sbjct: 284 ETLRLATRSIAYYPQLFLKDNSRWLNYLKAKNLELMQKGKRIEVATHFIHPDEVSVQSLS 343 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 IS L GI + Q+ L+G ND+ L L + + +Y++ P Sbjct: 344 IISDLVAGGIGVYVQTPFLEGCNDNGPELVTLFQALRGAGAEIHYIYIP 392 >gi|302867587|ref|YP_003836224.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029] gi|315506013|ref|YP_004084900.1| lysine 2,3-aminomutase [Micromonospora sp. L5] gi|302570446|gb|ADL46648.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029] gi|315412632|gb|ADU10749.1| Lysine 2,3-aminomutase [Micromonospora sp. L5] Length = 468 Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 77/307 (25%), Positives = 142/307 (46%), Gaps = 28/307 (9%) Query: 36 SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84 S+ + P + N + PH P DPI R IP ++ + P D + +++ Sbjct: 97 SMLVPPQMLNTMVPHQPMSTEALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 156 Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAY 137 +G+ HRYP ++L +LL CP YC C R ++VG+ V K T +A + Y Sbjct: 157 VAEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHITY 216 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196 ++ + +V+ +GGD + + L+ L L I+ ++ +R ++ + PQ + P++ Sbjct: 217 LKAHPGVRDVVVSGGDVANVPWRNLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDV 276 Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248 ++ L+ A + V +AIH NH + A + G+ + +Q VL++G+N Sbjct: 277 VEGLERVARTAARRGVNLAIHTHVNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVN 336 Query: 249 DDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 L +L E I PYY + D+ H+R+ + Q++ + + G P Sbjct: 337 ATSADLLDLCFALQGEAGILPYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATP 396 Query: 308 FYILDLP 314 + D+P Sbjct: 397 RIVCDVP 403 >gi|145595294|ref|YP_001159591.1| hypothetical protein Strop_2771 [Salinispora tropica CNB-440] gi|145304631|gb|ABP55213.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440] Length = 448 Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust. Identities = 78/338 (23%), Positives = 144/338 (42%), Gaps = 46/338 (13%) Query: 42 VIANLINPHN-PNDPIARQFIPQKEELNILPEE-------------------------RE 75 V+++LI+ P+DPI R PQ+ L E Sbjct: 54 VLSHLIDWDRIPDDPIFRLVFPQRGMLAAADERLLGDLLGAGDRTGLRVEVARIRAGLNP 113 Query: 76 DPIGDNNHS-------PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVL 126 P G H+ L G+ H+Y + +L + C YC +CFR Sbjct: 114 HPSGQQQHNVPHLDGHELPGMQHKYRETVLYFPQQGQTCHAYCTYCFRWAQFVGDADLRF 173 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 ++ E + Y+ + +V+ TGGDP+I+S +RL+ ++ L + V+ +RF ++ Sbjct: 174 AAPGPEQLVTYLHRHPAVTDVLVTGGDPMIMSTERLRSHVEPLLRVDTVRTVRFGTKAVA 233 Query: 187 VDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIIL 237 P R + L + AG+ V + H +HP E + E A AI+R+ + G ++ Sbjct: 234 YWPYRFVSDSDADDLLRLFAQVVAAGRNVAVMAHFSHPRELATEIATRAIARIRSTGAVV 293 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 Q+ L++ +NDDP +++ R + L PYY+ +F++ + I + Sbjct: 294 YCQAPLIRYVNDDPHAWSDMWRAELALGAVPYYMFVERDTGPRDYFQVPLTRAADIFRTA 353 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335 + + GL + + GKV +D +++ +G + Sbjct: 354 YQDLPGLARTVRGPVMSATPGKVLVD--GVERTPHGEF 389 >gi|257056184|ref|YP_003134016.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017] gi|256586056|gb|ACU97189.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017] Length = 459 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 79/311 (25%), Positives = 138/311 (44%), Gaps = 32/311 (10%) Query: 36 SIALTPVIANLINPHNPNDP-----------IARQFIP----QKEELNILPEEREDPIGD 80 S+ L P + N + PH DP I R +P + E P + D + + Sbjct: 86 SMLLPPQMLNTMAPHAGTDPAKVTEAFYADPIRRYMLPVHSDRHPEWPSHPHSQRDSLHE 145 Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EA 133 ++G+ HRYP ++L +LL CP YC C R ++VG+ V + T +A Sbjct: 146 AEMWVVEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPQVDKHRLTLKPVDRQDA 205 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-I 192 + Y++ + +V+ +GGD + +L+ L L I+ V+ +R S+ PQ + Sbjct: 206 MIDYLKRTPGVRDVVVSGGDVANVPWHQLEAFLMRLLDIETVRDIRLASKALAGLPQHWL 265 Query: 193 NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLL 244 P++++ L + G + I H NH + A G+ + +Q VL+ Sbjct: 266 QPKVVEGLARVAGTARRRGVNLAIHTHINHVQSVTPLVAEATRAALEVGVRDVRNQGVLM 325 Query: 245 KGINDDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 +G+N P L +L E I PYY + D+ H+RL + E Q++ ++ + G Sbjct: 326 RGVNATPADLLDLCFALQGEANILPYYFYMCDMIPNAEHWRLAVWEAQELQHAIMGYLPG 385 Query: 304 LCQPFYILDLP 314 P + D+P Sbjct: 386 YATPRIVCDVP 396 >gi|284031530|ref|YP_003381461.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM 17836] gi|283810823|gb|ADB32662.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM 17836] Length = 490 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 72/308 (23%), Positives = 141/308 (45%), Gaps = 29/308 (9%) Query: 36 SIALTPVIANLINPHNPND--------PIARQFIP----QKEELNILPEEREDPIGDNNH 83 S+ L P + N I P D P+ R +P ++ + P D + ++ Sbjct: 93 SMLLPPQMLNTIVPQGAADYTEAFYADPVRRYMLPMFTDRRTDWPSHPHATRDSLHEHEM 152 Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-------KGTVLSSKDTEAALA 136 +G+ HRYP ++L ++L CP YC C R ++VG+ K T+ + + L Sbjct: 153 WATEGLTHRYPTKVLAEVLPTCPQYCGHCTRMDLVGNSTPVIDKLKFTIKPQQRLDDMLD 212 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ------ 190 Y++ + +V+ +GGD + RL+ L +L I++++ +R ++ + PQ Sbjct: 213 YLRRTPGVRDVVVSGGDVANMPWPRLEAFLTSLLEIENIRDIRLATKALMGMPQHWLSDD 272 Query: 191 -RINPELIQCL-KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGI 247 R E + + ++ G V + H N + A + +AG+ + +Q VL++G+ Sbjct: 273 VRAGVERVATIARQRGVMVAMHTHVNAAQSVTPLVAEATKAMFDAGLRDVRNQGVLMRGV 332 Query: 248 NDD-PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 ND P++L I PYY + D+ + H+R+++++ Q + + + G Sbjct: 333 NDSVPQLLDLCFALLDGATITPYYFYMCDMIPFSEHWRVSVKDAQHLQHGILGYLPGFAT 392 Query: 307 PFYILDLP 314 P + D+P Sbjct: 393 PRIVCDVP 400 >gi|311899414|dbj|BAJ31822.1| putative L-lysine 2,3-aminomutase [Kitasatospora setae KM-6054] Length = 487 Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust. Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 31/311 (9%) Query: 54 DPIARQFIPQKEELNIL----PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 DP+ R +P + + + P D + + ++G+ HRYP ++L +LL CP YC Sbjct: 107 DPVRRYMLPVRSDRHPSWPSHPLAARDSLHEAQMWVVEGLTHRYPTKVLAELLSTCPQYC 166 Query: 110 RFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C R ++VG V ++ E L Y++ + +V+ +GGD + RL Sbjct: 167 GHCTRMDLVGRSTPQVAKARLVLRPADREEQMLDYLKRTPSVRDVVVSGGDLANVPWPRL 226 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKE-----AGKPVYIAI--HAN 214 + L L + V+ +R S+ + PQ + P+++ ++ A + V +A+ HAN Sbjct: 227 ESFLLRLLELGSVRDIRLASKSVVGLPQHWLQPKVLSGVERVARLAARRSVNLAVHTHAN 286 Query: 215 HPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272 H + A L +AG+ + +Q VL++G+N P L +L E I PYY + Sbjct: 287 HAASVTPLVAEAARGLLDAGVRDVRNQGVLMRGVNATPTALLDLCFALQGEANILPYYFY 346 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG----------GYGKVKI 322 D+ H+RL + E Q + ++ + G P + D+P GY +V+ Sbjct: 347 LCDVIPNAEHWRLPLAEAQHLQEAILGYLPGYATPRLVADVPDVGKRWVHQAVGYDRVRG 406 Query: 323 DTHNIKKVGNG 333 ++ K G Sbjct: 407 ISYWTKNYRTG 417 >gi|302533021|ref|ZP_07285363.1| CmnP [Streptomyces sp. C] gi|302441916|gb|EFL13732.1| CmnP [Streptomyces sp. C] Length = 463 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 74/292 (25%), Positives = 136/292 (46%), Gaps = 22/292 (7%) Query: 53 NDPIARQFIPQKEELNIL----PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108 +DP+ R +P + + + P D + + + ++G+ HRYP ++L +LL CP Y Sbjct: 116 DDPVRRYMLPVFSDRHPVWPSHPMASRDSLHEQDMWVVEGLTHRYPTKVLAELLSTCPQY 175 Query: 109 CRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C C R ++VG+ V ++ E LA+++ I +V+ +GGD + R Sbjct: 176 CGHCTRMDLVGNSTPQVTKNRLQLKPADRAEQILAHLRATPGIRDVVVSGGDLANMPWPR 235 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGKPVYIAIHA 213 L++ + L I+ ++ +R S+ I PQ +P +++ + + G V + HA Sbjct: 236 LERFVDGLLDIESIRDIRLASKGLIGLPQHWSSPPVLRGVERVAAKARSRGVRVALHTHA 295 Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYL 271 N + + A L AG+ + +Q VL++G+ND L +L + I PYY Sbjct: 296 NAAQQVTSGVARAAWGLLGAGLHDVRNQGVLMRGVNDSAHDLLDLCFALCDHAGITPYYF 355 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + D+ H+R+ + Q I + + G P + D+P GK +D Sbjct: 356 YMCDMIPNAEHWRVPLHSAQLIQRQIMGYLPGFATPRIVCDVPMA-GKRWVD 406 >gi|225849592|ref|YP_002729826.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1] gi|225646452|gb|ACO04638.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1] Length = 438 Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 85/327 (25%), Positives = 139/327 (42%), Gaps = 46/327 (14%) Query: 42 VIANLINPHNP-NDPIARQFIPQKEEL-------------NILPEE--RED--------- 76 VI LIN +P NDPI R PQK+ L N P+E RE+ Sbjct: 44 VIDQLINWEDPLNDPIFRLTFPQKDMLFPEHYELIARLLKNGEPQEKIREEANRIRMELN 103 Query: 77 --PIGDNNHSP------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVL 126 P G + P L G H+Y + IL K C YC FCFR Sbjct: 104 PHPAGQKYNVPEVDGIKLHGAQHKYKETILFFPKQGQTCHAYCSFCFRWPQFVGINELKF 163 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRV 184 + K+ + + YI+ +I +++FTGGDPLI+ L+ ++ + I H++ +R ++ Sbjct: 164 AMKEVDVLIEYIKRNPEITDILFTGGDPLIMKTSVLKSYIQPVLEANIPHLKTIRIGTKS 223 Query: 185 PIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGI 235 P R + L + + + G + H NH E + + A+ ++ G Sbjct: 224 LGFWPYRFTEDEDAQELLDLFRQIVDRGYHLAFMAHFNHYKELRTDVVREAVDKILETGA 283 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 ++ +QS +L+ IND E+ A + + V + + PYY+ +F + + I Sbjct: 284 VIRTQSPVLRHINDSSEVWATMWKEQVSMGMIPYYMFMARDTGAQHYFGVPLVRAWNIFR 343 Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKI 322 +K SGL + + GKV+I Sbjct: 344 DAYKKTSGLARTVKGPSMSATPGKVRI 370 >gi|256810214|ref|YP_003127583.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus fervens AG86] gi|256793414|gb|ACV24083.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus fervens AG86] Length = 620 Score = 99.8 bits (247), Expect = 5e-19, Method: Compositional matrix adjust. Identities = 69/256 (26%), Positives = 118/256 (46%), Gaps = 11/256 (4%) Query: 29 KEISNHYSIALTPVIANLINPHNP---NDPIARQFIPQKEELNILPEEREDP------IG 79 K + N +TP +L + NP + + RQ IP + + + E +ED +G Sbjct: 253 KAVKNGIPFGITPYYLHLFDFENPYVEDLAVRRQVIPPEWYVEKMMEHKEDRDKAFDFMG 312 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYI 138 +++ SP+ + RY ++K CP C +C R MV + E AL + Sbjct: 313 EHDTSPIDLVTRRYVPIAIIKPYESCPQICVYCQRNWMVQDFDTKAFKGWEKVEKALDWF 372 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 E + E++ TGGDP LS K ++++L + + HV +RF +R + P RI EL + Sbjct: 373 AEHDSMIEILITGGDPFSLSDKAIERILNRVSEMDHVIGVRFGTRTIVTAPMRITDELAE 432 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 L K + ++ H YE + E + +L I + +Q V + ++ E +A L Sbjct: 433 LLGSFEKSLMVSTHVESCYEITPEVKETVEKLRKNNIYVYNQHVFHRYVSRRFENVA-LR 491 Query: 259 RTFVELRIKPYYLHHP 274 ++ I PYY +P Sbjct: 492 IALKKVGIIPYYTFYP 507 >gi|262199318|ref|YP_003270527.1| radical SAM domain-containing protein [Haliangium ochraceum DSM 14365] gi|262082665|gb|ACY18634.1| radical SAM domain-containing protein [Haliangium ochraceum DSM 14365] Length = 458 Score = 99.8 bits (247), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 60/238 (25%), Positives = 119/238 (50%), Gaps = 13/238 (5%) Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 N ++G+ H+Y + +L C YC +CFR S ++++ E LAY++ Sbjct: 130 NGKVVRGVQHKYRETVLFFPSQGQTCHSYCTYCFRWAQFISNDELKFAAQEVEPLLAYLK 189 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN---- 193 E I +V+FTGGDP+++ L++ ++ L + HV +R ++ P+ P R Sbjct: 190 EHPGISDVLFTGGDPMVMKTPVLRRYIEPLLAADLPHVSTIRIGTKAPVYWPYRFTDGND 249 Query: 194 -PELIQCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIN 248 EL++ +E GK + + +H +H E + E A++R+ G ++ Q+ L++ +N Sbjct: 250 ADELLRLFEEIVARGKHLAVLVHFSHYREVEAPEVQTALARIRATGAVIRCQAPLIRHVN 309 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 D PE+ + + V+ PYY+ +F++ + I + ++++SGL + Sbjct: 310 DTPEVWTRMWHSQVKQGAIPYYMFVERDTGPNEYFKVPLHRALDIFQAARKQLSGLSR 367 >gi|171316099|ref|ZP_02905324.1| radical SAM domain protein [Burkholderia ambifaria MEX-5] gi|171098703|gb|EDT43497.1| radical SAM domain protein [Burkholderia ambifaria MEX-5] Length = 465 Score = 99.4 bits (246), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 67/252 (26%), Positives = 118/252 (46%), Gaps = 13/252 (5%) Query: 85 PLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 PL G+ H+Y + +L C YC FCFR ++ ++ AY++ Sbjct: 126 PLSGLQHKYRETVLFFPSAGQSCHAYCTFCFRWPQFVGMDELKFDARSSQELTAYLRRHP 185 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPE 195 ++ +++ TGGDPL++S + L + L+ L H+Q +R ++ PQR + + Sbjct: 186 EVTDILVTGGDPLVMSARALGEYLEPLLAPEFDHLQNIRIGTKSVAYWPQRFVSDKDSDD 245 Query: 196 LIQCLKE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDP 251 L++ ++ +G+ + I H NHP E A A+ R+ G + Q+ L++ IN+DP Sbjct: 246 LLRVFEKVVASGRNLAIMGHYNHPRELQHPIAQRALRRIIGTGASVRIQAPLIRHINEDP 305 Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 A L T V L PYY+ + +F+L + +I + +SGL + Sbjct: 306 AAWAELWTTGVRLGAIPYYMFVERDTGPSDYFKLPLARAYEIFQAAYRSVSGLARTVRGP 365 Query: 312 DLPGGYGKVKID 323 + GKV +D Sbjct: 366 SMSAFPGKVMVD 377 >gi|94264369|ref|ZP_01288160.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] gi|93455198|gb|EAT05414.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] Length = 598 Score = 99.0 bits (245), Expect = 9e-19, Method: Compositional matrix adjust. Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 7/218 (3%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEA 133 D +G+ + SP + I RYP +LK + CP C +C R + KG EA Sbjct: 281 DFMGEEDTSPFELITRRYPAICILKPFNTCPQICVYCQRNWEIDEVMAKGAFAGWPRIEA 340 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 A+ +I E I EV+ TGGDPL + ++RL ++++ + I ++ +R +R + P R Sbjct: 341 AIQWIHEHPSIHEVLITGGDPLAMGNERLARIMERVAAIPTIERIRIGTRTLVTMPMRFT 400 Query: 194 PELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 L+ L +P V + H HPYE + E A++RL GI + +Q V + Sbjct: 401 EGLLSLLARHRQPGRREVAVVTHVQHPYEITPELAEAVNRLRLRGIPVYNQLVYTFYASR 460 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287 E A L R + I PYY + T+ +R+ I Sbjct: 461 RFEA-AALRRQLRLIGIDPYYTFNTKGKDETAAYRVPI 497 >gi|224368753|ref|YP_002602914.1| KamA3 [Desulfobacterium autotrophicum HRM2] gi|223691469|gb|ACN14752.1| KamA3 [Desulfobacterium autotrophicum HRM2] Length = 440 Score = 98.6 bits (244), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 13/251 (5%) Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L GI H+Y + +L C +C FCFR G + KD + + Y++ + + Sbjct: 121 LNGIQHKYRETMLFFPTQGQTCHAFCSFCFRWPQFTGMDGHRFAMKDADLMVRYVRSQPE 180 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINP------- 194 + +++FTGGDPL +S K L L + K ++ +R ++ P R Sbjct: 181 LTDILFTGGDPLTMSTKILSVYLNAIIDAKLPGIRTIRIGTKTLSFWPYRFTTDKDSAEL 240 Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPE 252 EL + + +AG + I H NHP E + E A+ + G ++ SQS +L IN + Sbjct: 241 LELFKRVTDAGIHLAIMSHLNHPREIATPECKRAVEAIRGTGAVIRSQSPVLNRINASAK 300 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 I + + + + L I PYY+ +F + + + KI +SG+ + Sbjct: 301 IWSKMWQDQISLGIVPYYMFVARNTGAQDYFSIPLVDTWKIFRDAYSSVSGISRTVRGPS 360 Query: 313 LPGGYGKVKID 323 + GK+KI+ Sbjct: 361 MSASPGKIKIE 371 >gi|212224418|ref|YP_002307654.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1] gi|212009375|gb|ACJ16757.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1] Length = 636 Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 75/288 (26%), Positives = 137/288 (47%), Gaps = 19/288 (6%) Query: 5 HKTLTSAQDLYNANLIK--KEQIDEI-KEISNHYSIALTPVIANLIN---PHNPNDPIAR 58 K L ++L ++K +E ++E+ + + +TP +L + P+ + + R Sbjct: 237 RKGLEILRELNELGIVKVPEEDLEEVERAVKYRIPWGITPYYLHLWDFKEPYKEDRHVRR 296 Query: 59 QFIPQKEELNIL---PEERE---DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 Q +P K ++ + ++RE D +G+++ SP+ + RY +LK CP C +C Sbjct: 297 QVMPPKWYMDNMILHRKDREYAFDFMGEHDTSPIDLVTRRYVMIAILKAFDTCPQICVYC 356 Query: 113 FRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 R V G+ E A+ + E+ + +V+ TGGDP LS+K + K++ L Sbjct: 357 QRNWEVLEPFMAGSFPGWDKIEKAIEWFGERESMIDVLITGGDPFALSNKIIDKIMSRLS 416 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAA 226 HV +R+ +R+P+ P R+ EL + L +P V ++ H YE + E A Sbjct: 417 EFDHVINIRWGTRIPVTVPMRVTEELAEILGSYIEPGKRNVAVSTHVETAYEVTPEMARA 476 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 + L GI + +Q V + ++ E +A L ++ I PYY +P Sbjct: 477 VYNLRRQGIYVYNQLVYQRNVSRRFENVA-LRIALKKIGIDPYYTFYP 523 >gi|124003742|ref|ZP_01688590.1| conserved hypothetical protein [Microscilla marina ATCC 23134] gi|123990797|gb|EAY30264.1| conserved hypothetical protein [Microscilla marina ATCC 23134] Length = 424 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 60/236 (25%), Positives = 109/236 (46%), Gaps = 14/236 (5%) Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEK 141 + ++ +PD +L C YC +CFR S+ + S KD + + Y++ Sbjct: 124 YRSFNNVISLFPD----PMLKTCHAYCSYCFRWIAFNNSEVQSYTSYKDPQTPVTYLKAN 179 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP------- 194 +I E +FTG DPL L+ ++++ + L I V +RF+++ P R Sbjct: 180 PEINETLFTGADPLTLTAAKIKEYIDPLLTIDSVTTIRFNTKALTWWPFRFTTDKDAKNI 239 Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 EL + + +G+ + H H E ++ I A+ + G ++ Q +++GIND E Sbjct: 240 LELFKHIVASGRTLTFCAHLTHVKELQNDNVIEAVKNIQATGAKIICQGPVVEGINDTIE 299 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 NL V L ++PYY+ + FR+ + + I ++++ GL QPF Sbjct: 300 DWVNLWSQEVALGLQPYYMFVELNHNAEASFRIPLAKAVHIFQEAEKRVKGLQQPF 355 >gi|161529280|ref|YP_001583106.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus SCM1] gi|160340581|gb|ABX13668.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus SCM1] Length = 448 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 93/369 (25%), Positives = 157/369 (42%), Gaps = 49/369 (13%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSI-ALTPVIANLINPHN-PNDPIARQF 60 L+ TL++ +DL I +E+ E++ + N A V+ LIN ++ PNDP+ Sbjct: 14 LKSYTLSNFRDLPQIQNISEEKQFEMEVVGNVLPFKANNYVVEQLINWNDIPNDPMYVLT 73 Query: 61 IPQ----------------------KEELNILPEERED----PIGD--------NNHSPL 86 PQ KE N+ E R P G + + L Sbjct: 74 FPQRGMLKPEHYAKMENTLKNTSDKKEIANVANEIRLQLNPHPAGQMELNVPTLKDGTKL 133 Query: 87 KGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + L C YC FCFR + ++ E + Y+ E +I Sbjct: 134 YGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMQEGEQLVQYVSEHPEI 193 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRI-----NPELI 197 +V+FTGGDP+I+ K K + L K +++ +R ++ P + + E++ Sbjct: 194 SDVLFTGGDPMIMKAKMFSKYVDALIEAKLPNLKTIRIGTKALSYWPYKFLTDSDSQEML 253 Query: 198 QCLK---EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEI 253 Q + ++G + H NH E S A+ +AI + G + +QS LL INDD E+ Sbjct: 254 QVFQKITDSGLHLAFMAHFNHLNELSTNAVKSAIKEVRKTGAQIRTQSPLLAHINDDAEM 313 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 AN+ V+L PYY+ +F + + + +I + +SGL + + Sbjct: 314 WANMWTKQVQLGCIPYYMFVVRDTGAQHYFGVPLVKAYEIFSQAYSTVSGLGRTVRGPSM 373 Query: 314 PGGYGKVKI 322 GKV++ Sbjct: 374 SATPGKVQV 382 >gi|94271846|ref|ZP_01292023.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] gi|93450322|gb|EAT01561.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] Length = 572 Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 7/218 (3%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEA 133 D +G+ + SP + I RYP +LK + CP C +C R + KG EA Sbjct: 255 DFMGEEDTSPFELITRRYPAICILKPFNTCPQICVYCQRNWEIDEVMAKGAFAGWPRIEA 314 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 A+ +I E I EV+ TGGDPL + ++RL ++++ + I ++ +R +R + P R Sbjct: 315 AIQWIHEHPSIHEVLITGGDPLAMGNERLARIMERVAAIPTIERIRIGTRTLVTMPMRFT 374 Query: 194 PELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 L+ L +P V + H HPYE + + A++RL GI + +Q V + Sbjct: 375 EGLLSLLARHRQPGRREVAVVTHVQHPYEITPDLAEAVNRLRLRGIPVYNQLVYTFYASR 434 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287 E A L R + I PYY + T+ +R+ I Sbjct: 435 RFEA-AALRRQLRLIGIDPYYTFNTKGKDETAAYRVPI 471 >gi|148255106|ref|YP_001239691.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1] gi|146407279|gb|ABQ35785.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1] Length = 460 Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust. Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 32/314 (10%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 + ++ + + +T I NPH P ++ +PE Sbjct: 101 DALERALRVGGSAPVEVTAAIHRRFNPH-----------PGRQMTMNMPEL--------G 141 Query: 83 HSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 S + G+ H+Y + L+ C YC FCFR + +++ +++ +AYI+E Sbjct: 142 GSGVSGLQHKYAETCLVFPASGQTCAAYCSFCFRWPQFIGNRDLRMATDESQRFVAYIKE 201 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP---- 194 +I +V+ TGGDPLI+ L++ L L + HV +R +++ P R Sbjct: 202 HKEISDVLLTGGDPLIMRASVLRRYLLPLLGADLAHVTTIRIGTKMLGFWPYRFTTDDDA 261 Query: 195 ----ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIND 249 L++ + +G+ + I +H +HP E + A A+ RL + G +L SQS +++G+ND Sbjct: 262 DDLIALLEEVVRSGRHLAIMLHISHPRELETAAARRAVQRLLSTGAVLRSQSPVVRGVND 321 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309 D I L V I PYY+ + F + + +I ++SGL + Sbjct: 322 DARIWQELWSREVRQGIVPYYMFVLRDTGPRAFFEVPLARALEIYRGGIRQVSGLARSAR 381 Query: 310 ILDLPGGYGKVKID 323 + GKV +D Sbjct: 382 GPIMSTDMGKVAVD 395 >gi|330468030|ref|YP_004405773.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032] gi|328811001|gb|AEB45173.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032] Length = 467 Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 77/307 (25%), Positives = 143/307 (46%), Gaps = 28/307 (9%) Query: 36 SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84 S+ + P + N + P P DPI R IP ++ + P D + +++ Sbjct: 96 SMLVPPQMINTMVPFAPPSTEALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 155 Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---EAALAY 137 +G+ HRYP ++L +LL CP YC C R ++VG+ V LS K +A + Y Sbjct: 156 VAEGLTHRYPTKVLAELLATCPQYCGHCTRMDLVGNSTPAVDKLKLSLKPVDRYDAHITY 215 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196 ++ + +V+ +GGD + + L+ L L I+ ++ +R ++ + PQ + P++ Sbjct: 216 LKAHPGVRDVVVSGGDVANVPWRNLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDV 275 Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248 ++ L+ A + V +AIH NH + A + G+ + +Q VL++G+N Sbjct: 276 VEGLERVARTAARRGVNLAIHTHVNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVN 335 Query: 249 DDPEILANLMRTFV-ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 + L +L E I PYY + D+ H+R+ + Q++ + + G P Sbjct: 336 ATSKDLLDLCFGLQGEAGILPYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATP 395 Query: 308 FYILDLP 314 + D+P Sbjct: 396 RIVCDVP 402 >gi|145594793|ref|YP_001159090.1| radical SAM domain-containing protein [Salinispora tropica CNB-440] gi|145304130|gb|ABP54712.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440] Length = 491 Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust. Identities = 76/307 (24%), Positives = 141/307 (45%), Gaps = 28/307 (9%) Query: 36 SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84 S+ +TP + N + P DPI R IP ++ + P D + +++ Sbjct: 120 SMLVTPQMLNTMVPFESMSTDALYADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 179 Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAY 137 +G+ HRYP ++L +LL CP YC C R ++VG+ + K T +A ++Y Sbjct: 180 VAEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHISY 239 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196 ++ + +V+ +GGD + K L+ L L I V+ +R ++ + PQ + ++ Sbjct: 240 LKAHPGVRDVVVSGGDVANVPWKNLETYLMRLLDIDTVRDIRLATKALMGLPQHWLRADV 299 Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248 ++ L+ A + V +AIH NH + A + G+ + +Q VL++G+N Sbjct: 300 VEGLERVARTAARRGVNLAIHTHVNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVN 359 Query: 249 -DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 P++L E I PYY + D+ H+R+ + Q++ + + G P Sbjct: 360 ATTPDLLDLCFALQGEAGILPYYFYMCDMIPNAEHWRVPVGHAQQLQHDIMGYLPGYATP 419 Query: 308 FYILDLP 314 + D+P Sbjct: 420 RIVCDVP 426 >gi|302340485|ref|YP_003805691.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM 11293] gi|301637670|gb|ADK83097.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM 11293] Length = 461 Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 68/253 (26%), Positives = 120/253 (47%), Gaps = 17/253 (6%) Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G+ H+Y + +L K C YC +CFR K ++S + E + Y+ + Sbjct: 126 LHGMQHKYDETVLFFPKQGQTCHAYCTYCFRWAQFIGNKELQMASGEVEPLIRYLDRHPE 185 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRI-----NP 194 + +++ TGGDP+ + L++ ++ L ++H +Q +R ++ P R + Sbjct: 186 VSDLLITGGDPMFMRSSVLRRYIEPL--LRHRPGNLQTIRIGTKSLSYWPYRYLSDKDSD 243 Query: 195 ELIQCLKE---AGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250 +LI E AG + I H H E S A+ AAI R+ G I+ QS +++ INDD Sbjct: 244 DLISLFHEITTAGYHLSIMAHFTHIRELSTLAVEAAIRRIKETGAIIRCQSPIVRHINDD 303 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 + A + R V+L + PYY+ ++F + I E K+ + ++SGL + Sbjct: 304 ASMWAEMWRREVQLGMIPYYMFIARDTGPKAYFDIPIAETLKLFSDAYRQVSGLARTVRG 363 Query: 311 LDLPGGYGKVKID 323 + GK+ +D Sbjct: 364 PSMSAKPGKILVD 376 >gi|118577041|ref|YP_876784.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A] gi|118195562|gb|ABK78480.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A] Length = 456 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 79/322 (24%), Positives = 138/322 (42%), Gaps = 32/322 (9%) Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE---ER 74 N++KK D++ A +I P + + ++ + ELN P E Sbjct: 82 NMLKKRHFDQV---------------AQMIKNETPKEEMDKKINDVRMELNPHPAGQLEL 126 Query: 75 EDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 P + + L G+ H+Y + L C YC FCFR + ++ E Sbjct: 127 NVP-SLKDGTKLYGMQHKYNETCLFFPSQSQTCHAYCTFCFRWPQFVGMDDMKFAMREGE 185 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQ 190 YI E +I +V+FTGGDP+I+ K + + TL K ++ +R +++ P Sbjct: 186 QLAQYIGEHPEISDVLFTGGDPMIMKAKMFRTYVDTLIDAKLPNLTTIRIGTKMLSYWPY 245 Query: 191 RI--------NPELIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQS 241 ++ + + + ++G + I H NHP E S +A+ +AI ++ G + +QS Sbjct: 246 KVLSDDDAAETLDTFRHISDSGLHLSIMGHFNHPVELSTDAVKSAIRKIRATGAQIRTQS 305 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 LL INDD + + V L PYY+ +F +++ +I S ++ Sbjct: 306 PLLSHINDDADAWVRMWTQQVRLGCIPYYMFIVRDTGAQHYFGMSLARAYEIFTSAYRRV 365 Query: 302 SGLCQPFYILDLPGGYGKVKID 323 SGL + + GKV I+ Sbjct: 366 SGLARTVKGPSMSATPGKVLIN 387 >gi|302531882|ref|ZP_07284224.1| lysine 2,3-aminomutase [Streptomyces sp. AA4] gi|302440777|gb|EFL12593.1| lysine 2,3-aminomutase [Streptomyces sp. AA4] Length = 460 Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 66/282 (23%), Positives = 131/282 (46%), Gaps = 14/282 (4%) Query: 56 IARQFIPQKEELNILPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLH--VCPVYCRFC 112 + R P +E LN P ++ + + ++G+ H+Y + +L+ H C YC +C Sbjct: 120 LRRAVAPMRERLNPHPGDQLTKNVPQDGSGVVRGLQHKYAETVLVFPSHGQTCHAYCGYC 179 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--R 170 FR G D + + Y++ ++ +V+FTGGDP+I++ L++ ++ L Sbjct: 180 FRWAQFVGMPGLKQQVDDNDRIVDYLRSHREVSDVLFTGGDPMIMTTDVLRQYVEPLLGP 239 Query: 171 YIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE 222 +H++ RF ++ P R + L + + +G+ V + H +H E + Sbjct: 240 GFEHLRNFRFGTKALSYWPYRFTTDPDSDDLLRLFEQIVGSGRHVAVMAHFSHARELGTD 299 Query: 223 AIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281 A+A A+ R+ + G ++ Q+ +++ +ND+ A + R V L PYY+ Sbjct: 300 AVARAMRRIRDTGAVVRVQAPIVRHVNDNAPAWAEMWRQSVRLGAVPYYMFVERDTGARE 359 Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +F L + + I +++SGL + + GKV +D Sbjct: 360 YFALPLAQVVDIYRDAFKQVSGLERTARGPVMSASPGKVALD 401 >gi|239944852|ref|ZP_04696789.1| hypothetical protein SrosN15_27950 [Streptomyces roseosporus NRRL 15998] gi|239991318|ref|ZP_04711982.1| hypothetical protein SrosN1_28712 [Streptomyces roseosporus NRRL 11379] gi|291448314|ref|ZP_06587704.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998] gi|291351261|gb|EFE78165.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998] Length = 448 Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 79/339 (23%), Positives = 142/339 (41%), Gaps = 47/339 (13%) Query: 42 VIANLINPHN-PNDPIARQFIPQKEELN-------------------ILPEEREDPIGDN 81 V++ LI+ H P DPI + PQ L I E R G N Sbjct: 54 VLSELIDWHRVPEDPIFQLVFPQHGMLRAEDEKLLVDLARARAPKREIAAEVRRIRAGLN 113 Query: 82 NH--------------SPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTV 125 H L+GI H+Y + +L + C YC +CFR Sbjct: 114 PHPSGQMELNVPSLADDALEGIQHKYRETVLYFPQQGQTCHSYCTYCFRWAQFIGDADLR 173 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 ++ E + Y++ + +V+FTGGDP+++S +RL+ L+ + ++ V+ +R ++ Sbjct: 174 FAAPGPERLVEYLRCHPAVSDVLFTGGDPMVMSTERLRSHLEPVLSVETVRTVRIGTKAV 233 Query: 186 IVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGII 236 PQR + L + + +G+ + + H +HP E + A A+ R+ G + Sbjct: 234 AYWPQRFVSDADADDLLRLFEQVVASGRTLAVMAHFSHPRELETATARRALGRVRATGAV 293 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 + Q+ L+ +NDD A L R + PYY+ +F + + +G +I + Sbjct: 294 VYCQAPLIAHVNDDARTWAELWRAELSAGTVPYYMFVERDTGPRHYFEVPLTKGLEIFRT 353 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335 K+ GL + + GKV +D +++ G + Sbjct: 354 AYSKLPGLARTVRGPVMSATPGKVLVD--GVEETAEGRF 390 >gi|302337139|ref|YP_003802345.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293] gi|301634324|gb|ADK79751.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293] Length = 818 Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust. Identities = 80/271 (29%), Positives = 122/271 (45%), Gaps = 33/271 (12%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNN------HSPLKGIVHRYPDRILLKLLHVCPVYC 109 +A Q++P EEL DP+G N H L + Y +R++ L CPVYC Sbjct: 169 VAYQYMPFVEEL--------DPVGHTNTWIGQFHQGL--LEQMYQNRVIFLLNMSCPVYC 218 Query: 110 RFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 RFCFR+ E + TV +D A+A++++ I E++ TGGDP L+ + + Sbjct: 219 RFCFRKHKESRNEKNPTV---EDVNRAIAHVEKSPSIKEIVLTGGDPF-LNRSNMAAAID 274 Query: 168 TLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCLKEA-------GKPVYIAIHANHPY 217 L I HVQ LR +R P+ + LK+ GK + IA H HP Sbjct: 275 GLMGIDHVQSLRLATRSLAYYPELFLGKGEWYLNYLKQKNLELQLHGKRMEIATHFIHPD 334 Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP-DL 276 E S E++ I+ L +GI + Q+ L+ ND L L R + +Y++ P Sbjct: 335 EVSPESLGIITELVKSGIAVYVQTPFLQHCNDTGPELQKLFRLLRGAGAEMHYIYIPCSP 394 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 G S + + +G I L+ +S P Sbjct: 395 IHGNSVYWSPLSDGIDIAEYLRAHLSDRSVP 425 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 61/241 (25%), Positives = 108/241 (44%), Gaps = 31/241 (12%) Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L S TEA + YI+ + I +VI L + ++ + I HV +R +P Sbjct: 554 LQSDVTEADIDYIRSDTLISDVIIRTSSLLAEELHEISSLIGKIGTIDHVNAVRIS--LP 611 Query: 186 IVD--PQRINPELIQCLKEAGK-----PVYIAIHAN--HPYEFSEEAIAAISRLANAGII 236 V+ P+ I+P +IQ L + P+ + I + + +E A + RL N GI Sbjct: 612 EVNYAPESISPAMIQHLASCNRLTVSNPLRLEIETWFINANQITEMHSALVRRLNNKGIT 671 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH---HPDLAAGTSHFRLTIEEGQKI 293 + + + LL IND+P+ + NL + I+ ++L+ HP A + + + I Sbjct: 672 VYANTPLLGEINDNPDEIYNLTYAYRRAGIEFHHLYVAGHPIQKAWNEKHPIDMYDVVDI 731 Query: 294 VASLKEKISGLCQPFYILDLP---------------GGYGKVKIDTHNIK--KVGNGSYC 336 + ++ + SG P YIL P GG +VK+D++++ K + SY Sbjct: 732 ASKIRREGSGREGPRYILQTPLGDVYYGLTSSFIHGGGDIRVKLDSYDLPYFKALDSSYT 791 Query: 337 I 337 + Sbjct: 792 L 792 >gi|269125115|ref|YP_003298485.1| hypothetical protein Tcur_0857 [Thermomonospora curvata DSM 43183] gi|268310073|gb|ACY96447.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183] Length = 446 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 59/247 (23%), Positives = 113/247 (45%), Gaps = 11/247 (4%) Query: 88 GIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 G+ H+Y + +L K C YC +CFR + L+ D Y+ ++ Sbjct: 139 GMQHKYDETVLYFPKQGQTCHAYCTYCFRWAQFVGEPDLKLAGDDALQLRDYLVAHPRVT 198 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPE------LI 197 V+FTGGD +I+ L++ ++ L ++ ++ +R ++ PQ+ +P+ L Sbjct: 199 NVLFTGGDAMIMGEPVLRRYVEPLLELEQIESIRIGTKSLAYWPQKFVTDPDADAMLRLF 258 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEILAN 256 + + AGK + H +HP E + A+ R+ G ++ +Q+ L++ INDDP++ Sbjct: 259 EQVVNAGKSLAFMAHFSHPRELEPAMVREAVRRIRGTGAVIRTQAPLIRSINDDPKVWET 318 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 + RT + + PYY+ +F + + +I +SGL + + Sbjct: 319 MWRTQTRMGMVPYYMFVERDTGPRDYFAVPLGRAYEIFRDAYRHVSGLARTVRGPSMSAT 378 Query: 317 YGKVKID 323 GKV +D Sbjct: 379 PGKVCVD 385 >gi|308049116|ref|YP_003912682.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799] gi|307631306|gb|ADN75608.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799] Length = 452 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 91/346 (26%), Positives = 146/346 (42%), Gaps = 52/346 (15%) Query: 27 EIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDNNHS 84 E+K +++ + +AN LI+ N P DPI + PQK L ER + N S Sbjct: 42 EMKVVASVLPFRVNEYVANDLIDWDNLPADPIFQLSFPQKGMLAPEAFERMATLLRQNPS 101 Query: 85 P---------------------------------LKGIVHRYPDRILL--KLLHVCPVYC 109 P L G+ H+Y + L C YC Sbjct: 102 PQQVFELGQTLRAEMNPHPAGQMSMNVPELDGEKLPGMQHKYKETALFFPAQGQYCHSYC 161 Query: 110 RFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 FCFR + VG K +S D + Y+ +I +++ TGGDP+++ ++ + ++ Sbjct: 162 TFCFRWAQFVG--KAMRFNSNDADTLHRYLAAHPEISDLLITGGDPMVMKTTKIAQYVEP 219 Query: 169 L---RYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPY 217 L +HVQ +RF ++ P R + L + L +AGK V I H NH Sbjct: 220 LIDNPDTEHVQTVRFGTKALTFWPYRFVTDDDADELLALFRRLVKAGKHVSIMAHLNHWQ 279 Query: 218 EFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E A+ R+ G + +Q+ LLK IND+ + A + + V+L I PYY+ Sbjct: 280 EMETPIFEEAVRRIRATGANIRAQAPLLKNINDNADDWARMWQKQVKLGIIPYYMFVERD 339 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 +F + + + +I K+SGL + + G GKV+I Sbjct: 340 TGPKRYFEVPLYQAYEIYRDAISKVSGLARTARGPSMSAGPGKVEI 385 >gi|288916751|ref|ZP_06411125.1| conserved hypothetical protein [Frankia sp. EUN1f] gi|288351825|gb|EFC86028.1| conserved hypothetical protein [Frankia sp. EUN1f] Length = 457 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 76/334 (22%), Positives = 145/334 (43%), Gaps = 55/334 (16%) Query: 52 PNDPIARQFIPQKEELNILPEEREDPIGD----------------------NNH------ 83 P+DPI R PQ ++LP E+ PI N H Sbjct: 67 PDDPIYRLVFPQP---DMLPAEQVAPIAQLLARGAPTREVQAAAAAVRAALNPHPAGQRE 123 Query: 84 --------SPLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 + L G+ H+YP+ +L H C YC +CFR + ++S++ + Sbjct: 124 LNVPELAGTRLDGLQHKYPETVLYFPAHGQTCHAYCTYCFRWAQFVQEPHLRMASRNVDD 183 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQ 190 + Y++ ++ +V+ TGGDP+++S + L + + L + H+Q +R ++ P Sbjct: 184 LVTYVRAHPEVTDVLITGGDPMVMSAEMLARCVLPLLDEPGLGHLQSIRIGTKSLSYWPA 243 Query: 191 RI--NP------ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQS 241 R +P L + + +G+ + + H +HP E ++ A A+ R+ + G ++ +Q Sbjct: 244 RFVTDPGADDTLRLFERVVASGRSLALMAHYSHPRELETDVAEHAVRRVLSTGAVIRTQG 303 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 +++ +NDD A + + V L + PYY+ +F + + +I ++ + Sbjct: 304 PVIRSVNDDAGAWAAMWQRQVRLGMVPYYMFVERDTGPRGYFEVALLRAYEIFSAAYRSV 363 Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335 SGL + + GKV +D + VG Y Sbjct: 364 SGLARTVRGPVMSATPGKVVVD--GVHTVGAEKY 395 >gi|153875079|ref|ZP_02003031.1| Protein of unknown function DUF160 [Beggiatoa sp. PS] gi|152068457|gb|EDN66969.1| Protein of unknown function DUF160 [Beggiatoa sp. PS] Length = 314 Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 65/245 (26%), Positives = 112/245 (45%), Gaps = 13/245 (5%) Query: 91 HRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 H+Y + +L C YC FCFR L+S++ +A + Y+ E ++ +++ Sbjct: 3 HKYRETVLFFPSQGQTCHAYCSFCFRWPQFVGISDLKLASREVDALIQYVSEHPEVSDIL 62 Query: 149 FTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------LIQCL 200 TGGDP+I+ + L + L + H++ +R ++ P R + L Sbjct: 63 LTGGDPMIMKTRILATYIDALLEANLPHLKTIRIGTKALSYWPYRFTSDADAEDLLTLFA 122 Query: 201 KEAGKPVYIAI--HANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEILANL 257 K A K ++A H NHP E +A+ AI + G + +QS LL IND PEI A + Sbjct: 123 KVATKNKHLAFMAHFNHPRELKTDAVREAIKGIRETGAQIRTQSPLLAHINDQPEIWAEM 182 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 +T EL PYY+ +F +++ I + + ++GL + + Sbjct: 183 WKTQTELGCIPYYMFITRDTGAQHYFGVSLIRAWDIFKNAYQNVTGLARTVRGPSMSATP 242 Query: 318 GKVKI 322 GKV++ Sbjct: 243 GKVQM 247 >gi|159037977|ref|YP_001537230.1| lysine 2,3-aminomutase [Salinispora arenicola CNS-205] gi|157916812|gb|ABV98239.1| Lysine 2,3-aminomutase [Salinispora arenicola CNS-205] Length = 467 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 75/307 (24%), Positives = 141/307 (45%), Gaps = 28/307 (9%) Query: 36 SIALTPVIANLINPHNP-------NDPIARQFIP----QKEELNILPEEREDPIGDNNHS 84 S+ + P + N + P P DPI R IP ++ + P D + +++ Sbjct: 96 SMLVPPQMLNTMVPFAPMTTEALYADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMW 155 Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAY 137 +G+ HRYP ++L +LL CP YC C R ++VG+ + K T +A + Y Sbjct: 156 VAEGLTHRYPTKVLAELLSTCPQYCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHITY 215 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPEL 196 ++ + +V+ +GGD + + L+ L L I+ V+ +R ++ + PQ + ++ Sbjct: 216 LKAHPGVRDVVVSGGDVANVPWRNLESYLMRLLDIETVRDIRLATKALMGLPQHWLRADV 275 Query: 197 IQCLKE-----AGKPVYIAIHA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN 248 ++ L+ A + V +AIH NH + A + G+ + +Q VL++G+N Sbjct: 276 VEGLERVARTAARRGVNLAIHTHVNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVN 335 Query: 249 -DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 P++L E I PYY + D+ H+R+ + Q++ + + G P Sbjct: 336 ATTPDLLDLCFALQGEAGILPYYFYLCDMIPNAEHWRVPVGYAQQLQHDIMGYLPGYATP 395 Query: 308 FYILDLP 314 + D+P Sbjct: 396 RIVCDVP 402 >gi|113477791|ref|YP_723852.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101] gi|110168839|gb|ABG53379.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101] Length = 445 Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 68/274 (24%), Positives = 127/274 (46%), Gaps = 14/274 (5%) Query: 64 KEELNILPE-EREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGS 120 +++LN P +++ + N P+ GI H+Y + +L+ C YC FCFR Sbjct: 105 RQQLNPHPSGQKQHNVPTFNSEPVPGIQHKYRETVLVFPTAGQTCHAYCTFCFRWPQFVG 164 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQIL 178 +G +++++ Y+Q+ ++ +V+FTGGDP+ + ++L + L K H+Q + Sbjct: 165 LEGLKFATRESGMFQQYLQQHQEVRDVLFTGGDPMTMKARQLSLYIDPLLEAKFDHIQTI 224 Query: 179 RFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISR 229 R ++ P R + L + + + GK + I H H E A AI R Sbjct: 225 RIGTKSISFWPYRYVTDEDADNTLRLFEKIVKRGKHLAIMAHYEHWQELDTPVATEAIRR 284 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 + + G + +Q+ +++ IND E A +++ V L PYY+ +F + + Sbjct: 285 IRSTGAQIRTQAPVVRHINDSAETWAKMLQMQVSLGCIPYYMFVERQTGAKKYFEIPLVR 344 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 +I +++SGL + + GKV ID Sbjct: 345 VLEIYREAVKQVSGLARTIRGPLMSALPGKVAID 378 >gi|256394391|ref|YP_003115955.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928] gi|256360617|gb|ACU74114.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928] Length = 441 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 14/281 (4%) Query: 56 IARQFIPQKEELNILPEERED-PIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFC 112 +AR + +N PE ++D + + PL G H+Y +L C YC +C Sbjct: 100 LARTIAAIRAGMNPHPEHQQDLNVPSDPDGPLPGTQHKYEQTLLYFPAAGQTCHAYCTYC 159 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FR + S+ D A+AY++ ++ +V+ TGGDP++++ +RL++ L+ + Sbjct: 160 FRWAQFVGEPELRFSAADPARAVAYLRRHPEVTDVLVTGGDPMVMTAERLRQHLEPFLAV 219 Query: 173 KHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAI 224 + +Q +R ++ P R + L + + EAGK + H +HP E E AI Sbjct: 220 ESLQTVRIGTKSVASWPHRYVSDHDADATLRLFEQIAEAGKTPALMAHLSHPVEL-EPAI 278 Query: 225 A--AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 A A+SR+ + G ++ Q+ ++ +NDD A L R PYY+ + Sbjct: 279 ARTALSRIRDTGALVYCQAPIIGRVNDDAAAWARLWRAEQRAGAVPYYMFVARDTGPRDY 338 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 F++ + ++ + GL + + GKV +D Sbjct: 339 FKVPLARAAEVFRDAYSALPGLARTVRGPVMSTTGGKVVVD 379 >gi|289665700|ref|ZP_06487281.1| hypothetical protein XcampvN_22139 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 217 Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust. Identities = 52/145 (35%), Positives = 79/145 (54%), Gaps = 2/145 (1%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C Sbjct: 75 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 134 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR +++ T EA A I I EV+ +GGDPL L+ +L ++ L I Sbjct: 135 FRRHFPYAEE-TAARDGWREAG-AAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAI 192 Query: 173 KHVQILRFHSRVPIVDPQRINPELI 197 H++ LR HSR+PIV P+R++ L+ Sbjct: 193 PHLKRLRIHSRLPIVLPERVDAPLL 217 >gi|329765548|ref|ZP_08257124.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137986|gb|EGG42246.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 455 Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 120/254 (47%), Gaps = 13/254 (5%) Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + + L G+ H+Y + L C YC FCFR + ++ E + Y++ Sbjct: 130 DGTKLYGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDELKFAMREGEQLVQYLR 189 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI----- 192 E +I +V+FTGGDP+I+ K + L + +++ +R ++ P + Sbjct: 190 EHPEISDVLFTGGDPMIMKAKIFSTYINPLLEANLPNLRTIRIGTKALSYWPYKFLTEDD 249 Query: 193 NPELIQCLKE-AGKPVYIAI--HANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGIN 248 E++ K K +++A+ H NH E +A+ AI ++ G + +QS LL+ IN Sbjct: 250 AEEMLDIFKRVVDKGIHLAVMGHFNHLVELKTDAVKEAIKKIRATGAQIRTQSPLLRHIN 309 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 DD ++ A + + V+L PYY+ +F +++ + Q+I +K++GL + Sbjct: 310 DDADMWAEMWKVQVQLGCIPYYMFVVRDTGAQHYFGISLIDAQRIFRDAYKKVTGLARTV 369 Query: 309 YILDLPGGYGKVKI 322 + GKV+I Sbjct: 370 RGPSMSATPGKVQI 383 >gi|331005683|ref|ZP_08329048.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989] gi|330420506|gb|EGG94807.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989] Length = 146 Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 48/131 (36%), Positives = 72/131 (54%), Gaps = 1/131 (0%) Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGII 236 +R HSR+P+V P RI E I+ + + + +H NH E + AIS++ NAGI Sbjct: 1 MRIHSRLPVVIPDRITAESIEWMSQTRLATVMVLHINHAQELKNGILRTAISQMKNAGIT 60 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 +L+QSVLLKGIND + A L T + + PYYLH D G++HF + + + + Sbjct: 61 VLNQSVLLKGINDTLDTQAELSETLFDAGVLPYYLHVLDKVQGSAHFDTMDDRAKTLHKA 120 Query: 297 LKEKISGLCQP 307 + K+ G P Sbjct: 121 MTAKLPGYLVP 131 >gi|256377785|ref|YP_003101445.1| lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827] gi|255922088|gb|ACU37599.1| Lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827] Length = 459 Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 69/282 (24%), Positives = 132/282 (46%), Gaps = 21/282 (7%) Query: 54 DPIARQFIPQKEELN----ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 DP+ R +P + + + P D + + ++G+ HRYP ++L +L+ CP YC Sbjct: 115 DPVRRYMLPVRSDRDPDWPSHPHSSRDSLHEAEMWVVEGLTHRYPTKVLAELVSTCPQYC 174 Query: 110 RFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C R ++VG+ V K + + Y++ + +V+ +GGD + +L Sbjct: 175 GHCTRMDLVGNSTPQVAKHKLALKPVDRQDRIVEYLKSTPGVRDVVVSGGDVANVPWPQL 234 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKE-----AGKPVYIAIHA--N 214 + L L ++ V+ +R ++ PQ + P++++ L+ A + V +AIH N Sbjct: 235 ESFLMRLLGVETVRDVRLATKALAGLPQHWVQPQVVEGLERVARTAARRGVNLAIHTHVN 294 Query: 215 HPYEFSE-EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLH 272 H + A AA + LA + +Q VL++G+N L +L E + PYY + Sbjct: 295 HANSVTPLVAEAARTALAVGVRDVRNQGVLMRGVNATATDLLDLCFALQGEAGVLPYYFY 354 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 D+ H+R+ + E Q++ ++ + G P + D+P Sbjct: 355 MCDMIPNAEHWRVAVWEAQELQHAIMGYLPGYATPRIVCDVP 396 >gi|260828943|ref|XP_002609422.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae] gi|229294778|gb|EEN65432.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae] Length = 512 Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 74/300 (24%), Positives = 139/300 (46%), Gaps = 24/300 (8%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEERED---PIGDNNHSPLKGIVHRYPDRILL 99 I+ L+ + P + R+ ++E+N P +++ P D + PL G+ H+Y + +L Sbjct: 127 ISKLMKNNAPRTVLQREAEVIRKEMNPHPAQQKTMNVPRVDGH--PLPGLQHKYRETVLF 184 Query: 100 --KLLHVCPVYCRFCFRREM---VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 C YC +CFR VGS + S D++ Y++ + +++ TGGDP Sbjct: 185 FPAEGQFCHAYCTYCFRWAQFTSVGSPQQ--FQSDDSKLLQLYLRRNRHVSDLLLTGGDP 242 Query: 155 LILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRI-----NPELIQCLKE---A 203 +++S +RL + L + ++ +R ++ P R + +L++ +E + Sbjct: 243 MVMSAQRLGGYILPLLKDTCLDNLSTIRIGTKSLAYWPYRYVTDSDSDDLLRIFEEVVKS 302 Query: 204 GKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 G+ + I H +HP E S + AI RL G ++ +Q+ L+ +N DP A L+RT Sbjct: 303 GRQLAIMAHFSHPRELSTPTVQEAIRRLRMTGAVIRAQAPLVNHVNADPATWARLIRTET 362 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 L + PYY+ +F + + +I + +SGL + + GKV + Sbjct: 363 RLGVIPYYMFVERDTGARHYFEVPLARAVEIYSQAFSSVSGLGRTLRGPSMSATPGKVHV 422 >gi|297196895|ref|ZP_06914292.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083] gi|197711500|gb|EDY55534.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083] Length = 438 Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 76/342 (22%), Positives = 141/342 (41%), Gaps = 53/342 (15%) Query: 42 VIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPI---------------------- 78 V+ LI+ +P DPI R PQ+ +LPE+ E + Sbjct: 54 VLDQLIDWTDPAQDPIFRLVFPQR---GMLPEDDERSLESLVRSGAAKREMAAEVARIRA 110 Query: 79 GDNNHSP--------------LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQK 122 G N H L G+ H+Y + +L C +C +CFR Sbjct: 111 GLNPHPSGQREYNVPVHEGERLAGLQHKYRETVLYFPTQGQSCHSFCTYCFRWAQFVGDP 170 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 ++ + ++Y+ + ++ +V+ TGGDP+++S +RL L+ L ++ V +R + Sbjct: 171 SLRFAAPGPDRLVSYLHDHPEVSDVLVTGGDPMVMSTERLTGHLEPLLGVESVNTVRIGT 230 Query: 183 RVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANA 233 + PQR + L + + GK V + H HP E + A+ R+ Sbjct: 231 KSLAYWPQRFVSDADADSLLRLFERIAATGKQVAVMAHFTHPRELRTARVTEAVRRIRAT 290 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 G ++ Q+ ++ INDD E A++ ++ + L PYY+ +F++ + +I Sbjct: 291 GAVVYCQAPMVAHINDDAETWASMWKSELALGAVPYYMFVERDTGPYDYFKVPLARAMEI 350 Query: 294 VASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335 + + GL + + GKV +D ++ +G Y Sbjct: 351 FHTAYRTLPGLARTVRGPVMSTTPGKVVVD--GVETLGGDRY 390 >gi|167042471|gb|ABZ07196.1| putative Radical SAM superfamily protein [uncultured marine crenarchaeote HF4000_ANIW133C7] Length = 447 Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust. Identities = 66/254 (25%), Positives = 114/254 (44%), Gaps = 13/254 (5%) Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + + L G+ H+Y + L C YC FCFR + ++ E + Y++ Sbjct: 131 DGTKLYGMQHKYDETCLFFPSQSQTCHAYCTFCFRWPQFVGMDEMKFAMREGEQLVQYLK 190 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRI--NPE 195 E ++ +V+FTGGDP+I+ TL K +++ +R ++ P + + + Sbjct: 191 EHPEVTDVLFTGGDPMIMKASMFSAYTDTLLDAKLPNLKTIRIGTKAISYWPYKFLTDSD 250 Query: 196 LIQCLK------EAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGIN 248 + LK ++G + I H NH E S + I AI R+ G + +QS LL IN Sbjct: 251 ADETLKNFEKIVKSGTHLAIMAHFNHLVELSTDPIKEAIKRIRKTGAQIRTQSPLLAHIN 310 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 DD + A + + V L PYY+ +F + + + +KI S ++SGL + Sbjct: 311 DDSSMWAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRSAFRQVSGLARTV 370 Query: 309 YILDLPGGYGKVKI 322 + GKV + Sbjct: 371 RGPSMSATPGKVHV 384 >gi|332706173|ref|ZP_08426242.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L] gi|332355010|gb|EGJ34481.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L] Length = 445 Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 61/234 (26%), Positives = 108/234 (46%), Gaps = 13/234 (5%) Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + GI H+YPD +L+ C YC+FCFR +++++ Y+++ + Sbjct: 127 ISGIQHKYPDTVLIFPSSGQACHAYCQFCFRWAQFVDTNTHKFTTRESGRFQDYLRQHKE 186 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------ 195 + +V+ TGGDP+I+S +RL + ++ L +H+Q +R ++ P R + Sbjct: 187 VTDVVLTGGDPMIMSARRLFQYIEPLLDPEFEHIQTIRIGTKSVAYWPYRYVTDRDADDV 246 Query: 196 --LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPE 252 L + + +GK + + H H E A AI R+ + G L +QS LLK +ND Sbjct: 247 LRLFEKIVYSGKHLAVMGHYTHWRELDTPIAQEAIRRIRSTGAQLRAQSPLLKHVNDSAR 306 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 + + V L PYY+ +F + + +I + +SGL Q Sbjct: 307 AWRKMWQMQVRLGCIPYYMFVERDTGPKHYFGIPLVRTWEIFRHAIKGVSGLSQ 360 >gi|167045081|gb|ABZ09744.1| putative Radical SAM superfamily protein [uncultured marine crenarchaeote HF4000_APKG8I13] Length = 449 Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 113/254 (44%), Gaps = 13/254 (5%) Query: 82 NHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + + L G+ H+Y + L C YC FCFR + ++ E + Y++ Sbjct: 131 DGTKLYGMQHKYDETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMREGEQLVQYLK 190 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRI--NPE 195 E +I +V+FTGGDP+I+ L K +++ +R ++ P + + + Sbjct: 191 EHPEISDVLFTGGDPMIMKASMFSVYTDALLDAKLPNLKTIRIGTKAISYWPYKFLTDSD 250 Query: 196 LIQCLK------EAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGIN 248 + LK E+G + I H NH E S + I A+ R+ G + +QS LL IN Sbjct: 251 ADETLKNFEKIVESGTHLAIMAHFNHLVELSTDPIKEAVKRIRKTGAQIRTQSPLLAHIN 310 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 DD ++ A + + V L PYY+ +F + + + +KI ++SGL + Sbjct: 311 DDTDMWAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRDAFRQVSGLARTV 370 Query: 309 YILDLPGGYGKVKI 322 + GKV + Sbjct: 371 RGPSMSATPGKVHV 384 >gi|295401598|ref|ZP_06811566.1| lysine 2,3-aminomutase YodO family protein [Geobacillus thermoglucosidasius C56-YS93] gi|294976365|gb|EFG51975.1| lysine 2,3-aminomutase YodO family protein [Geobacillus thermoglucosidasius C56-YS93] Length = 154 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 4/142 (2%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 I KE+ +++K+I+N Y + NLIN +PNDPI + IP + ELN D Sbjct: 16 IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPNEGELNEYGS--WDASD 73 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + + + G H+Y LL + VC YCRFCFR+ + S +S D + YI Sbjct: 74 EEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVKEAMS--DVTPGIEYIA 131 Query: 140 EKSQIWEVIFTGGDPLILSHKR 161 + +I V+ TGGD LIL+ K+ Sbjct: 132 QTPEINNVLLTGGDSLILATKK 153 >gi|213416979|ref|ZP_03350123.1| hypothetical protein Salmonentericaenterica_03062 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 141 Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 46/135 (34%), Positives = 72/135 (53%) Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G+N Sbjct: 1 PARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVN 60 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 D+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG P Sbjct: 61 DNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPR 120 Query: 309 YILDLPGGYGKVKID 323 ++ G K +D Sbjct: 121 LAREIGGEPSKTPLD 135 >gi|297570169|ref|YP_003691513.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio alkaliphilus AHT2] gi|296926084|gb|ADH86894.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio alkaliphilus AHT2] Length = 594 Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 7/218 (3%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEA 133 D +G+ + SP I RYP +LK + CP C +C R + G + + Sbjct: 277 DFMGEEDTSPFDLITRRYPAICILKPYNTCPQICVYCQRNWEIDEVMAPGAFAGMEKIKE 336 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 A+ +I + I EV+ TGGDPL + ++ L ++++ + I V+ +R +R + P R Sbjct: 337 AIDWIHDHPAIHEVLITGGDPLAMGNETLAEIIERVAAIPTVERIRLGTRTLVTMPMRFT 396 Query: 194 PELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 L + +P V + H HPYE + E + A++RL GI + +Q V I+ Sbjct: 397 EGLAGLIARHHRPGRREVAVMTHVQHPYEITPEMVEAVNRLRQLGIPVYNQLVYTFFISR 456 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287 E A L R I PYY + T +R+ I Sbjct: 457 RFEA-ACLRRQLRLSGIDPYYTFNTKGKDETIGYRVPI 493 >gi|256376813|ref|YP_003100473.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827] gi|255921116|gb|ACU36627.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827] Length = 450 Score = 86.3 bits (212), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 60/249 (24%), Positives = 118/249 (47%), Gaps = 11/249 (4%) Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G+ H+Y + L + C YC +CFR ++ E + Y+++ Sbjct: 131 LPGVQHKYRETALYFPQQGQTCHAYCTYCFRWAQFVGDADLRFAAPGPELLVRYLRQHPA 190 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLK 201 + +V+ TGGDP+I+S +RL+ L+ L + V+ +R ++ P R +P+ + L+ Sbjct: 191 VTDVLVTGGDPMIMSTERLRSHLEPLLAVDTVRTIRIGTKSVAYWPHRFTTDPDADEVLR 250 Query: 202 ------EAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 +G+ + + H +HP E +++A AA++R+ G ++ Q+ L+K +NDD + Sbjct: 251 LFERVVASGRSLAVMAHFSHPRELETDQARAALARIRATGAVVYCQAPLIKHVNDDSRVW 310 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 A++ R + + PYY+ +F++ + I + GL + + Sbjct: 311 ADMWRGELSAGLVPYYMFVERDTGPREYFKVPLARAVDIFQGAYRTLPGLARTVRGPSMS 370 Query: 315 GGYGKVKID 323 GKV +D Sbjct: 371 ATPGKVLVD 379 >gi|332975101|gb|EGK12006.1| protein of hypothetical function DUF160 [Desmospora sp. 8437] Length = 187 Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/117 (37%), Positives = 65/117 (55%), Gaps = 3/117 (2%) Query: 193 NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 + EL+ L E +++ H NHP E +++A AI L AG+IL++Q+ +LKGIND Sbjct: 6 DKELLDTLSEYSLGDSRIHVMAHFNHPRELTDQAYRAIDALQRAGVILVNQTPVLKGIND 65 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 DPEILA L+ + PYY AG + F LT E +++ K + SGL + Sbjct: 66 DPEILAELLDKLSWAGVTPYYFFQNRPVAGNADFVLTFREAYEVIEQAKARTSGLGK 122 >gi|213024108|ref|ZP_03338555.1| hypothetical protein Salmonelentericaenterica_16976 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 105 Score = 83.6 bits (205), Expect = 5e-14, Method: Composition-based stats. Identities = 44/104 (42%), Positives = 62/104 (59%) Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 GDPL+ L +L L IKHV+ LR HSR+PIV P RI EL+ ++ + + Sbjct: 1 GDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVN 60 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 H NH E E A+ +L + G+ LL+QSVLL+G+ND+ + LA Sbjct: 61 HINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLA 104 >gi|83859269|ref|ZP_00952790.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii HTCC2633] gi|83852716|gb|EAP90569.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii HTCC2633] Length = 481 Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust. Identities = 69/302 (22%), Positives = 132/302 (43%), Gaps = 43/302 (14%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNN------HSPLKGIVHRYPDRILLKLLHVCPVYC 109 +A++ K + PEE ED G+ + +SP+ G++H+Y + L+ ++ C +C Sbjct: 88 LAKRSTAVKNLIKARPEEMEDLSGEADPSNQLKYSPIPGLLHKY-ELCLVYVVRTCSSWC 146 Query: 110 RFCFRREMVGSQKGTVLSS----KD------TEAALAYIQEKSQIWEVIFTGGDPLILSH 159 R+C+R + + + G +S KD + I K ++ EV+ +GGDP++LS+ Sbjct: 147 RYCYRSDFLTGKTGKDTASIHEVKDYIETHNAKVERGEITHKPKVREVLLSGGDPMVLSN 206 Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK---EAGKPVYIA--IHAN 214 + L L L V+++R ++ P+R + + L E V +A +H Sbjct: 207 RNLFDYLNGLAEAG-VEVIRIGTKEMAFYPERFDDNFFRMLDLFHEVHPQVLVAFMVHFT 265 Query: 215 HPYEFSEEAI--------------------AAISRLANAGIILLSQSVLLKGINDDPEIL 254 HP EF + AA A + L +Q+ ++ G+NDD + L Sbjct: 266 HPDEFLRLDVNGDYVRDERGRPLRNPLVEQAATRLRARPFVTLENQTPIIDGVNDDADAL 325 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 + + + + +Y G F + +E+ K+ A + +SG+ + + L Sbjct: 326 RLMQQELKRMGVNNHYFFQCREIEGFRAFAVPVEKAWKLHAESQHGLSGIERSRFALSTE 385 Query: 315 GG 316 G Sbjct: 386 AG 387 >gi|289665699|ref|ZP_06487280.1| Putative radical SAM superfamily protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 123 Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 43/114 (37%), Positives = 61/114 (53%) Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 PV +HANH EF AA+ L +AG LL+Q+VLL+G+ND + LA L Sbjct: 7 PVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDALAALSERSFAAG 66 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + PYYLH D AG +HF + + + L ++SG P + ++PG GK Sbjct: 67 VLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIPGDTGK 120 >gi|111019966|ref|YP_702938.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1] gi|110819496|gb|ABG94780.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1] Length = 440 Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 72/273 (26%), Positives = 129/273 (47%), Gaps = 32/273 (11%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHV 104 +NPH P D ++ +PQ ++++ G+ H+Y + +L+ + Sbjct: 111 LNPH-PGDQLSMN-VPQHDDIDG-----------------SGMQHKYAETLLVFPRQGQT 151 Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C YC +CFR ++ EA Y+ I +V+ TGGDPL++ + L Sbjct: 152 CHSYCGYCFRWAQFVDTPDLKMAMSGPEAMTRYLDLHPGITDVLLTGGDPLVMRTELLAS 211 Query: 165 VLKTLRY--IKHVQILRFHSRVPIVDPQRI--NPE------LIQCLKEAGKPVYIAIHAN 214 L+ L +HV+ +R ++ P R+ PE L++ L AGK V + +H + Sbjct: 212 YLEPLLEPEREHVETIRIGTKAVSFWPYRLLAGPEADDLLRLLERLTAAGKHVAMMLHLS 271 Query: 215 HPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 H E ++ A A++RLA+ G +L +Q+ +++ +NDDP A+L + V R+ PYY+ Sbjct: 272 HVAELQTDAARTALARLASTGAVLRAQAPVVRHVNDDPRTWADLWQAQVRNRVVPYYMFV 331 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +F L + I +++SGL + Sbjct: 332 ERDTGARPYFGLPLARAVDIYREALQRVSGLGR 364 >gi|213584604|ref|ZP_03366430.1| hypothetical protein SentesTyph_26615 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 125 Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust. Identities = 41/112 (36%), Positives = 62/112 (55%) Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271 H NH E E A+ +L + G+ LL+QSVLL+G+ND+ + LANL + + PYYL Sbjct: 8 HINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMPYYL 67 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 H D G +HF +T +E ++I+ L +SG P ++ G K +D Sbjct: 68 HVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPRLAREIGGEPSKTPLD 119 >gi|332975102|gb|EGK12007.1| lysine 2,3-aminomutase [Desmospora sp. 8437] Length = 189 Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust. Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 4/133 (3%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 I +E+ +++ +I+N + L +LI+ ++PNDPI + IP + EL+ + D Sbjct: 26 IPEEKREKLTKITNKFVFRLNDYYLSLIDWNDPNDPIYKLIIPSEAELDEY--GKWDASD 83 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + + + G H+Y LL + VC YCRFCFR+ + + +S D + YI+ Sbjct: 84 EYTNYVVPGCQHKYQTTALLIVSEVCGAYCRFCFRKRLF--RNDVHEASLDVAPGVEYIR 141 Query: 140 EKSQIWEVIFTGG 152 + QI V+ TGG Sbjct: 142 KNPQINNVLLTGG 154 >gi|75764491|ref|ZP_00743973.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488018|gb|EAO51752.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 202 Score = 66.6 bits (161), Expect = 5e-09, Method: Compositional matrix adjust. Identities = 29/100 (29%), Positives = 53/100 (53%) Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D Sbjct: 9 IMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAVPTFVVD 68 Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 PGG GK+ + + + + + ++ YP S Sbjct: 69 APGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 108 >gi|255690900|ref|ZP_05414575.1| KamA family protein [Bacteroides finegoldii DSM 17565] gi|260623540|gb|EEX46411.1| KamA family protein [Bacteroides finegoldii DSM 17565] Length = 713 Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 71/261 (27%), Positives = 107/261 (40%), Gaps = 65/261 (24%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEERED--------------PI 78 TP +L+N + ND R +I L NI E+ED P Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAEKPNAAGWLLPD 301 Query: 79 GDNNHSPLKGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKD 130 G N H RYP+ +L + C C C F+ E + + T+ + Sbjct: 302 GHNIH-------RRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKES 354 Query: 131 TEAAL----AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-------------- 172 E L Y +E +Q+ +++ TGGD L+ +K LQ +L + + Sbjct: 355 WERKLRRLMTYFEEDTQLRDILITGGDALMSQNKTLQHILDAVYRMAVRKQKANLDRPEG 414 Query: 173 ---KHVQILRFHSRVPIVDPQRINPELIQCLKE-------AG-KPVYIAIHANHPYEFSE 221 +Q +R SR+P P RIN EL++ L+E AG K I H P E + Sbjct: 415 EKYAELQRVRLGSRLPAYLPMRINDELVEILREFKEKASAAGVKQFIIQTHFQTPLEVTP 474 Query: 222 EAIAAISRLANAGIILLSQSV 242 EA AI ++ +AG I+ +Q V Sbjct: 475 EAKEAIRKILSAGWIITNQLV 495 >gi|167944999|ref|ZP_02532073.1| KamA family protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 107 Score = 63.9 bits (154), Expect = 3e-08, Method: Composition-based stats. Identities = 36/105 (34%), Positives = 52/105 (49%) Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277 E S + +L+ GI LL+QSVLL+G+ND E LA L + + PYYLH D Sbjct: 2 EISAAVADGLQQLSEQGIRLLNQSVLLRGVNDSAETLAELSEQLFDAGVMPYYLHLLDRV 61 Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 G +HF L + Q+I +L + G P + + G K + Sbjct: 62 DGAAHFELPAAKSQQIYQALLAALPGYLVPKLVREEVGAPSKTPV 106 >gi|150005257|ref|YP_001300001.1| hypothetical protein BVU_2729 [Bacteroides vulgatus ATCC 8482] gi|149933681|gb|ABR40379.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 703 Score = 63.9 bits (154), Expect = 3e-08, Method: Compositional matrix adjust. Identities = 63/257 (24%), Positives = 106/257 (41%), Gaps = 51/257 (19%) Query: 37 IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89 + +TP +L+NP +D R +I +L NI E+ED + D + + Sbjct: 234 VFITPYYLSLLNPTGKGYDDEAIRSYILYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293 Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131 + RYPD +L + C C C R S++ L K++ Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353 Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173 + Y + +Q +++ TGGD L+ +K L+ +LK + + Sbjct: 354 LRKLMEYFENDTQFRDILITGGDALMSQNKTLRNILKAVYKMAVRKRNANLHRAEGEKYA 413 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIA 225 +Q +R SR+P+ P RIN EL++ L+E + I H P E + EA Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLEILREFKEKASAVGVSQFLIQTHFQTPLEVTPEARE 473 Query: 226 AISRLANAGIILLSQSV 242 AI ++ AG + +Q V Sbjct: 474 AIRKILAAGWTITNQLV 490 >gi|254883725|ref|ZP_05256435.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|254836518|gb|EET16827.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 703 Score = 63.2 bits (152), Expect = 7e-08, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%) Query: 37 IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89 + +TP +L+NP +D R +I +L NI E+ED + D + + Sbjct: 234 VFITPYYLSLLNPTGKGYDDEAIRSYILYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293 Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131 + RYPD +L + C C C R S++ L K++ Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353 Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK----------------- 173 + Y + +Q+ +++ TGGD L+ +K L+ +L+ + + Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLQRAEGEKYA 413 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIA 225 +Q +R SR+P+ P RIN EL++ L+E + I H P E + EA Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLEILREFKEKASAVGVSQFLIQTHFQTPLEVTPEARE 473 Query: 226 AISRLANAGIILLSQSV 242 AI ++ AG + +Q V Sbjct: 474 AIRKILAAGWTITNQLV 490 >gi|319643449|ref|ZP_07998072.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A] gi|317384854|gb|EFV65810.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A] Length = 576 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%) Query: 37 IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89 + +TP +L+NP +D R +I +L NI E+ED + D + + Sbjct: 107 VFITPYYLSLLNPTGKGYDDEAIRSYILYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWL 166 Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131 + RYPD +L + C C C R S++ L K++ Sbjct: 167 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 226 Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK----------------- 173 + Y + +Q+ +++ TGGD L+ +K L+ +L+ + + Sbjct: 227 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLQRAEGEKYA 286 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIA 225 +Q +R SR+P+ P RIN EL++ L+E + I H P E + EA Sbjct: 287 ELQRVRLGSRLPVYLPMRINDELLEILREFKEKASAVGVSQFLIQTHFQTPLEVTPEARE 346 Query: 226 AISRLANAGIILLSQSV 242 AI ++ AG + +Q V Sbjct: 347 AIRKILAAGWTITNQLV 363 >gi|237710948|ref|ZP_04541429.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229454792|gb|EEO60513.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 697 Score = 62.8 bits (151), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%) Query: 37 IALTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGI 89 + +TP +L+NP +D R +I PQ E NI E+ED + D + + Sbjct: 228 VFITPYYLSLLNPTGKGYDDTAIRSYILYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWL 287 Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131 + RYPD +L + C C C R S++ L K++ Sbjct: 288 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 347 Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173 + Y + +Q+ +++ TGGD L+ +K L+ +L+ + + Sbjct: 348 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLHRAEGEKYA 407 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIA 225 +Q +R SR+P+ P RIN EL+ L+E + I H P E + EA Sbjct: 408 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVRQFLIQTHFQTPLEVTPEARE 467 Query: 226 AISRLANAGIILLSQSV 242 AI ++ AG + +Q V Sbjct: 468 AIRKILAAGWTITNQLV 484 >gi|212694782|ref|ZP_03302910.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855] gi|212662636|gb|EEB23210.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855] Length = 703 Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%) Query: 37 IALTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGI 89 + +TP +L+NP +D R +I PQ E NI E+ED + D + + Sbjct: 234 VFITPYYLSLLNPTGKGYDDTAIRSYILYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293 Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131 + RYPD +L + C C C R S++ L K++ Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353 Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173 + Y + +Q+ +++ TGGD L+ +K L+ +L+ + + Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLHRAEGEKYA 413 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIA 225 +Q +R SR+P+ P RIN EL+ L+E + I H P E + EA Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVRQFLIQTHFQTPLEVTPEARE 473 Query: 226 AISRLANAGIILLSQSV 242 AI ++ AG + +Q V Sbjct: 474 AIRKILAAGWTITNQLV 490 >gi|237727246|ref|ZP_04557727.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229434102|gb|EEO44179.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 703 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%) Query: 37 IALTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGI 89 + +TP +L+NP +D R +I PQ E NI E+ED + D + + Sbjct: 234 VFITPYYLSLLNPTGKGYDDTAIRSYILYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293 Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131 + RYPD +L + C C C R S++ L K++ Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353 Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173 + Y + +Q+ +++ TGGD L+ +K L+ +L+ + + Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLHRAEGEKYA 413 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIA 225 +Q +R SR+P+ P RIN EL+ L+E + I H P E + EA Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVRQFLIQTHFQTPLEVTPEARE 473 Query: 226 AISRLANAGIILLSQSV 242 AI ++ AG + +Q V Sbjct: 474 AIRKILAAGWTITNQLV 490 >gi|265750535|ref|ZP_06086598.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263237431|gb|EEZ22881.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 703 Score = 62.4 bits (150), Expect = 9e-08, Method: Compositional matrix adjust. Identities = 64/257 (24%), Positives = 107/257 (41%), Gaps = 51/257 (19%) Query: 37 IALTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGI 89 + +TP +L+NP +D R +I PQ E NI E+ED + D + + Sbjct: 234 VFITPYYLSLLNPTGKGYDDTAIRSYILYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293 Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131 + RYPD +L + C C C R S++ L K++ Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353 Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173 + Y + +Q+ +++ TGGD L+ +K L+ +L+ + + Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLQRAEGEKYA 413 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIA 225 +Q +R SR+P+ P RIN EL+ L+E + I H P E + EA Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVRQFLIQTHFQTPLEVTPEARE 473 Query: 226 AISRLANAGIILLSQSV 242 AI ++ AG + +Q V Sbjct: 474 AIRKILAAGWTITNQLV 490 >gi|294777091|ref|ZP_06742548.1| KamA family protein [Bacteroides vulgatus PC510] gi|294448960|gb|EFG17503.1| KamA family protein [Bacteroides vulgatus PC510] Length = 703 Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust. Identities = 62/257 (24%), Positives = 106/257 (41%), Gaps = 51/257 (19%) Query: 37 IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89 + +TP +L+NP +D R +I +L NI E+ED + D + + Sbjct: 234 VFITPYYLSLLNPTGKGYDDEAIRSYILYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWL 293 Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131 + RYPD +L + C C C R S++ L K++ Sbjct: 294 LPDGHNIHRRYPDVAILIPDSMGRACGGLCASCQRMYDFQSERLNFNFEELKPKESWDKR 353 Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------K 173 + Y + +Q+ +++ TGGD L+ +K L+ +L+ + + Sbjct: 354 LRKLMEYFENDTQLRDILITGGDALMSQNKTLRNILEAVYKMAVRKRNANLHRAEGEKYA 413 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIA 225 +Q +R SR+P+ P RIN EL+ L+E + I H P E + EA Sbjct: 414 ELQRVRLGSRLPVYLPMRINDELLDILREFKEKASAVGVSQFLIQTHFQTPLEVTPEARE 473 Query: 226 AISRLANAGIILLSQSV 242 AI ++ AG + +Q V Sbjct: 474 AIRKILAAGWTITNQLV 490 >gi|270669603|ref|ZP_06222610.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212] gi|270316555|gb|EFA28395.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212] Length = 105 Score = 59.3 bits (142), Expect = 8e-07, Method: Compositional matrix adjust. Identities = 32/82 (39%), Positives = 45/82 (54%) Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 A+ +L + LL+QSVLL+ +NDD +IL L + I PYYLH D G SHF + Sbjct: 7 AMQKLNAVNVTLLNQSVLLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLI 66 Query: 286 TIEEGQKIVASLKEKISGLCQP 307 + E +I +L+ SG P Sbjct: 67 SDIEAMQIYKTLQSLTSGYLVP 88 >gi|10198121|gb|AAG15195.1|AF286047_3 unknown [Chlorobaculum tepidum] Length = 276 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 72/166 (43%), Gaps = 36/166 (21%) Query: 42 VIANLINPHN-PNDPIARQFIPQKEELN------------------ILPEERE------- 75 V NLI+ N P+DP+ R PQ L+ I+ EE Sbjct: 56 VAENLIDWSNIPDDPMFRLTFPQAGMLSADDYTMLSGLVASNADPSIIREEARKIQLRQN 115 Query: 76 -DPIGDN-------NHSPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTV 125 +P G + P G+ H+Y + +L L VC YC +CFR + Sbjct: 116 PNPAGQMELNTPWLDDEPFHGMQHKYRESVLFFPLEAQVCHAYCTYCFRWPQFSGVENLK 175 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 ++ E + Y+++ ++ +VIFTGGDP+++S ++K+ T + Sbjct: 176 FANDSIERLVEYLEQHPEVKDVIFTGGDPMVMSTMLIKKIHATAAW 221 >gi|189467675|ref|ZP_03016460.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM 17393] gi|189435939|gb|EDV04924.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM 17393] Length = 697 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 69/255 (27%), Positives = 107/255 (41%), Gaps = 51/255 (20%) Query: 39 LTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL--- 86 +TP +L+NP + ND R +I PQ E I ERED + G N + Sbjct: 235 VTPYYLHLLNPGSTGYNDESLRSYILYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLP 294 Query: 87 --KGIVHRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT-----E 132 I RYP+ +L + C C C R S++ L K+T Sbjct: 295 DGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDSLRPKETWEKKLR 354 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175 + Y +E +Q+ +++ TGGD L+ +K L +L+ + + + Sbjct: 355 RLMTYFEEDTQLRDILITGGDALMSQNKTLNTILEAIYRMAARKRKANQERPEGEKYAEL 414 Query: 176 QILRFHSRVPIVDPQRINPELIQCL---KEAG-----KPVYIAIHANHPYEFSEEAIAAI 227 Q +R SR+P P RIN EL++ L KE + I H P E + EA I Sbjct: 415 QRIRLGSRLPAYLPMRINNELVEILRTFKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGI 474 Query: 228 SRLANAGIILLSQSV 242 +L +AG ++ +Q V Sbjct: 475 RKLLSAGWLITNQLV 489 >gi|167624868|ref|YP_001675162.1| hypothetical protein Shal_2954 [Shewanella halifaxensis HAW-EB4] gi|167354890|gb|ABZ77503.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4] Length = 537 Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 14/176 (7%) Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G H+YP L+ K C +C +CFR V + + KD Y++ + Sbjct: 202 LDGSQHKYPQCQLVFDKTTQNCFSFCTYCFRHAQVRGDEDMFIQ-KDIAQLHEYLRRHKE 260 Query: 144 IWEVIFTGGDPLILSHKRLQKVLK------TLRYIKHVQI----LRFHSRVPIVDPQRIN 193 + +++ TGGD + RL++ + +L ++K+V++ L F + + + + Sbjct: 261 VTDILITGGDGGYMPMSRLKQYVMPLIEDPSLLHVKNVRLATRALTFQPEIVLTEKYQPM 320 Query: 194 PELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN 248 EL +++ G + H + P E + +AAI RL N G+ + SQS ++ I+ Sbjct: 321 LELFDTMRDNGVQLAWMAHFSTPRELLNPSTLAAIRRLQNHGVNIRSQSPMMNHIS 376 >gi|224538814|ref|ZP_03679353.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus DSM 14838] gi|224519571|gb|EEF88676.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus DSM 14838] Length = 697 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 67/255 (26%), Positives = 105/255 (41%), Gaps = 51/255 (20%) Query: 39 LTPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL--- 86 +TP +L+NP + ND R +I PQ E I ERED + G N + Sbjct: 235 VTPYYLHLLNPGSTGYNDESLRSYILYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLP 294 Query: 87 --KGIVHRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV---------LSSKDTE 132 I RYP+ +L + C C C R S++ + K Sbjct: 295 DGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDSLRPKEIWEKKLR 354 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175 + Y +E +Q+ +++ TGGD L+ +K L +L+ + + + Sbjct: 355 RLMTYFEEDTQLRDILITGGDALMSQNKTLNTILEAVYRMAARKRKANQERPEGEKYAEL 414 Query: 176 QILRFHSRVPIVDPQRINPELIQCL---KEAG-----KPVYIAIHANHPYEFSEEAIAAI 227 Q +R SR+P P RIN EL++ L KE + I H P E + EA I Sbjct: 415 QRIRLGSRLPAYLPMRINNELVEILRTFKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGI 474 Query: 228 SRLANAGIILLSQSV 242 +L +AG ++ +Q V Sbjct: 475 RKLLSAGWLITNQLV 489 >gi|157376843|ref|YP_001475443.1| hypothetical protein Ssed_3711 [Shewanella sediminis HAW-EB3] gi|157319217|gb|ABV38315.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3] Length = 493 Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 81/176 (46%), Gaps = 14/176 (7%) Query: 86 LKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G H+YP L+ K C +C +CFR V + + KD Y++ + Sbjct: 160 LDGSQHKYPQCQLVFDKTTQNCFSFCTYCFRHAQVRGDEDMFIQ-KDIAQLHEYLRRHPE 218 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRI-----NP- 194 + +++ TGGD + RL++ + L + HV+ +R +R P+ + P Sbjct: 219 VTDILITGGDGGYMPVSRLRQYVMPLIEDPSLLHVKNVRLATRALTFQPEMVLTEKYEPM 278 Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIN 248 EL +++ G + H + P E + IAAI RL N G+ + SQS ++ I+ Sbjct: 279 LELFDTMRDNGVQLAWMAHFSTPRELLNPSTIAAIRRLQNHGVNIRSQSPMMNHIS 334 >gi|319901443|ref|YP_004161171.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108] gi|319416474|gb|ADV43585.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108] Length = 697 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFI---PQKEEL--NILPEEREDPIGDNNHSPLKGIV-- 90 TP +L+N P+ +D R +I PQ E I ERED + + + ++ Sbjct: 237 TPYYLSLLNCTPNGYDDEALRSYILYSPQLVETYGQIHAWEREDIVEEGKPNAAGWLLPD 296 Query: 91 -----HRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALA- 136 RYP+ +L + C C C F+ + + + T+ + E L Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDTLHPKESWEKKLRR 356 Query: 137 ---YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 Y +E +Q+ +++ TGGD L+ +K L+ +L + + +Q Sbjct: 357 LMNYFEEDAQLRDILITGGDALMSQNKTLRNILDAVYRMAARKRKANEERPEGEKYAELQ 416 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+P P RIN EL++ LK+ + I H P E + EA I Sbjct: 417 RIRLGSRLPAYLPMRINDELVEILKKFKEKASTIGIRQFIIQTHFQTPLEVTPEAAKGIH 476 Query: 229 RLANAGIILLSQSV 242 +L +AG ++ +Q V Sbjct: 477 KLLSAGWLIDNQLV 490 >gi|325970018|ref|YP_004246209.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy] gi|324025256|gb|ADY12015.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy] Length = 710 Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 73/326 (22%), Positives = 132/326 (40%), Gaps = 63/326 (19%) Query: 5 HKTLTSAQDL--YNANLIKKEQIDEIKEI-SNHYSIALTPVIANLINPH------NP-ND 54 H + SA DL Y A+ + ++ + ++E + I TP +LI+ NP +D Sbjct: 222 HFAIRSADDLNLYLAHSMDEKTLSLMREAQAKGIPIFATPYFLSLIDTRPLEKRENPRSD 281 Query: 55 PIARQFIPQKEEL-----NILPEEREDPI--GDNNHS----PLKGIVHRYPDRILL---K 100 R ++ ++L +I+ E+ED G+ N + P + RYP+ + Sbjct: 282 EAIRSYLFYSKDLVQEFGSIVAWEKEDIARPGEPNAAGWLLPSHNVHRRYPNVAIFIPDT 341 Query: 101 LLHVCPVYCRFCFRREMVGSQKGTV------LSSKDT-----EAALAYIQEKSQIWEVIF 149 + C C +C R M Q G L K + E + Y + +W+++ Sbjct: 342 MGRACGGLCSYCQR--MYDFQGGRFNFELEKLRPKKSWQEQLEQNMEYFRNDPYLWDILI 399 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQI-----------------LRFHSRVPIVDPQRI 192 TGGD + S K L+ +L + + +I +R +++P+ PQR+ Sbjct: 400 TGGDAFMSSVKSLKNILDAVLAMARQKIEDNEARSPEEQYAPMRRVRLGTKIPVYLPQRV 459 Query: 193 NPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 EL+Q L + K + H + E + E A+ RL +G + +Q V Sbjct: 460 TAELVQVLADFKKKAALVGIDQCVVQTHVSSAMEITPETRKAVKRLLASGWAVTNQEVFT 519 Query: 245 KGINDDPEILANLMRTFVELRIKPYY 270 + A L + ++ + PYY Sbjct: 520 VAASRRGHS-AKLRKVLNDIGVLPYY 544 >gi|153809340|ref|ZP_01962008.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185] gi|149128110|gb|EDM19331.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185] Length = 712 Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 105/254 (41%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV-- 90 TP +L+N + ND R +I L NI E+ED + + I+ Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWILPD 301 Query: 91 -----HRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 RYP+ +L + C C C F+ E + + T+ + + L Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKESWDRKLRR 361 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q Sbjct: 362 LMTYFEEDTQLRDILITGGDALMSQNKTLRHILEAVYRMAVRKQRANLERPEGEKYAELQ 421 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN EL++ L+E K I H P E + EA AI Sbjct: 422 RVRLGSRLLAYLPMRINDELVEILREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 482 KILSAGWIITNQLV 495 >gi|329961990|ref|ZP_08300001.1| KamA family protein [Bacteroides fluxus YIT 12057] gi|328530638|gb|EGF57496.1| KamA family protein [Bacteroides fluxus YIT 12057] Length = 698 Score = 57.0 bits (136), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 44/214 (20%) Query: 73 EREDPIGDNNHSPLKGIV-------HRYPDRILL---KLLHVCPVYCRFC-----FRREM 117 ERED + + + ++ RYP+ +L + C C C F+ + Sbjct: 277 EREDTVEEGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKR 336 Query: 118 VGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI- 172 + + T+ + E L AY +E +Q+ +++ TGGD L+ +K L+ +L + + Sbjct: 337 LNFEFDTLRPKESWEKKLRRLMAYFEEDAQLRDILITGGDALMSQNKTLRNILDAVYRMA 396 Query: 173 ----------------KHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVY 208 +Q +R SR+P P RIN EL++ L+E + Sbjct: 397 SRKRKANLERPEGEKYAELQRIRLGSRLPAYLPMRINDELVEILREFKEKASTIGIRQFI 456 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 I H P E + EA I +L AG ++ +Q V Sbjct: 457 IQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLV 490 >gi|29349882|ref|NP_813385.1| hypothetical protein BT_4474 [Bacteroides thetaiotaomicron VPI-5482] gi|29341793|gb|AAO79579.1| conserved hypothetical protein [Bacteroides thetaiotaomicron VPI-5482] Length = 720 Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N + ND R +I L NI E+ED + G N + Sbjct: 244 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 303 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + T+ + ++ L Sbjct: 304 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRR 363 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 Y ++ +Q+ +++ TGGD L+ +K L+ +L+ + + +Q Sbjct: 364 LMTYFEQDTQLRDILITGGDALMSQNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQ 423 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN EL+ L+E K I H P E + EA AI Sbjct: 424 RVRLGSRLLAYLPMRINDELVDILREFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIR 483 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 484 KILSAGWIITNQLV 497 >gi|253569751|ref|ZP_04847160.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251840132|gb|EES68214.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 717 Score = 56.6 bits (135), Expect = 5e-06, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N + ND R +I L NI E+ED + G N + Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + T+ + ++ L Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRR 361 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 Y ++ +Q+ +++ TGGD L+ +K L+ +L+ + + +Q Sbjct: 362 LMTYFEQDTQLRDILITGGDALMSQNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQ 421 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN EL+ L+E K I H P E + EA AI Sbjct: 422 RVRLGSRLLAYLPMRINDELVDILREFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIR 481 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 482 KILSAGWIITNQLV 495 >gi|298384138|ref|ZP_06993699.1| KamA family protein [Bacteroides sp. 1_1_14] gi|298263742|gb|EFI06605.1| KamA family protein [Bacteroides sp. 1_1_14] Length = 718 Score = 56.6 bits (135), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 106/254 (41%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N + ND R +I L NI E+ED + G N + Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + T+ + ++ L Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRR 361 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 Y ++ +Q+ +++ TGGD L+ +K L+ +L+ + + +Q Sbjct: 362 LMTYFEQDTQLRDILITGGDALMSQNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQ 421 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN EL+ L+E K I H P E + EA AI Sbjct: 422 RVRLGSRLLAYLPMRINDELVDILREFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIR 481 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 482 KILSAGWIITNQLV 495 >gi|255011024|ref|ZP_05283150.1| hypothetical protein Bfra3_17927 [Bacteroides fragilis 3_1_12] gi|313148829|ref|ZP_07811022.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313137596|gb|EFR54956.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 699 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N + ND R +I L NI ERED + G N + Sbjct: 239 TPYYLSLLNTNGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + + + + L Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q Sbjct: 359 LMTYFEEDTQLRDILITGGDALMSQNKTLRNILEAVYRMAARKRKANQERPEGEKYAELQ 418 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN ELI+ L+E K I H P E + + AI Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASAIGMKQFIIQTHFQSPLEVTPQTREAIR 478 Query: 229 RLANAGIILLSQSV 242 ++ +AG ++ +Q V Sbjct: 479 KILSAGWLITNQLV 492 >gi|260171420|ref|ZP_05757832.1| hypothetical protein BacD2_06100 [Bacteroides sp. D2] Length = 711 Score = 56.2 bits (134), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N + ND R +I L NI E+ED + G N + Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + ++ + + L Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 AY +E +Q+ +++ TGGD L+ +K LQ +L + + +Q Sbjct: 362 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 421 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN L+ L+E K I H P E + EA AI Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 482 KILSAGWIITNQLV 495 >gi|160887264|ref|ZP_02068267.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483] gi|156107675|gb|EDO09420.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483] Length = 711 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N + ND R +I L NI E+ED + G N + Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + ++ + + L Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 AY +E +Q+ +++ TGGD L+ +K LQ +L + + +Q Sbjct: 362 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 421 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN L+ L+E K I H P E + EA AI Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 482 KILSAGWIITNQLV 495 >gi|293369159|ref|ZP_06615753.1| KamA family protein [Bacteroides ovatus SD CMC 3f] gi|292635742|gb|EFF54240.1| KamA family protein [Bacteroides ovatus SD CMC 3f] Length = 711 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N + ND R +I L NI E+ED + G N + Sbjct: 242 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 301 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + ++ + + L Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 AY +E +Q+ +++ TGGD L+ +K LQ +L + + +Q Sbjct: 362 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 421 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN L+ L+E K I H P E + EA AI Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 482 KILSAGWIITNQLV 495 >gi|299148849|ref|ZP_07041911.1| KamA family protein [Bacteroides sp. 3_1_23] gi|298513610|gb|EFI37497.1| KamA family protein [Bacteroides sp. 3_1_23] Length = 713 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N + ND R +I L NI E+ED + G N + Sbjct: 244 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 303 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + ++ + + L Sbjct: 304 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 363 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 AY +E +Q+ +++ TGGD L+ +K LQ +L + + +Q Sbjct: 364 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 423 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN L+ L+E K I H P E + EA AI Sbjct: 424 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 483 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 484 KILSAGWIITNQLV 497 >gi|237721600|ref|ZP_04552081.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229449396|gb|EEO55187.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 713 Score = 55.8 bits (133), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N + ND R +I L NI E+ED + G N + Sbjct: 244 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 303 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + ++ + + L Sbjct: 304 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 363 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 AY +E +Q+ +++ TGGD L+ +K LQ +L + + +Q Sbjct: 364 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 423 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN L+ L+E K I H P E + EA AI Sbjct: 424 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 483 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 484 KILSAGWIITNQLV 497 >gi|315919734|ref|ZP_07915974.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313693609|gb|EFS30444.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 713 Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N + ND R +I L NI E+ED + G N + Sbjct: 244 TPYYLSLLNVTGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPD 303 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + ++ + + L Sbjct: 304 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 363 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 AY +E +Q+ +++ TGGD L+ +K LQ +L + + +Q Sbjct: 364 LMAYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQ 423 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN L+ L+E K I H P E + EA AI Sbjct: 424 RVRLGSRLLAYLPMRINDGLVDVLREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 483 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 484 KILSAGWIITNQLV 497 >gi|291515343|emb|CBK64553.1| L-lysine 2,3-aminomutase [Alistipes shahii WAL 8301] Length = 699 Score = 55.5 bits (132), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 51/203 (25%), Positives = 86/203 (42%), Gaps = 44/203 (21%) Query: 77 PIGDNNHSPLKGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSS 128 P G N H RYP+ +L + C C C F+ E + + T+ Sbjct: 297 PDGHNIH-------RRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFETLRPK 349 Query: 129 KDTEAALA----YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL--------------- 169 + + L Y +E +Q+ +++ TGGD L+ +K L+ +L+ + Sbjct: 350 ESWDHKLRRLMNYFEEDTQLRDILITGGDALMSQNKTLRNILEAVCRMAGRKRRANARRP 409 Query: 170 --RYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEF 219 +Q +R SR+P P R+N EL++ L+E K I H P E Sbjct: 410 DGEKYAELQRVRLGSRLPAYLPMRVNDELVEILREFHEKASAVGVKQFVIQTHFQTPLEV 469 Query: 220 SEEAIAAISRLANAGIILLSQSV 242 + EA AI ++ +AG ++ +Q V Sbjct: 470 TPEAEEAIRKILSAGWLITNQLV 492 >gi|298484432|ref|ZP_07002588.1| KamA family protein [Bacteroides sp. D22] gi|298269405|gb|EFI11010.1| KamA family protein [Bacteroides sp. D22] Length = 713 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEERED--PIGDNNHSPL---- 86 TP +L+N + ND R +I L NI E+ED +G N + Sbjct: 242 TPYYLSLLNITGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPD 301 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + ++ + + L Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 Y +E +Q+ +++ TGGD L+ +K LQ +L + + +Q Sbjct: 362 LMTYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQ 421 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN L+ L+E K I H P E + EA AI Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDILREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 482 KILSAGWIITNQLV 495 >gi|237715748|ref|ZP_04546229.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262408756|ref|ZP_06085302.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294644787|ref|ZP_06722531.1| KamA family protein [Bacteroides ovatus SD CC 2a] gi|294806062|ref|ZP_06764919.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b] gi|229444457|gb|EEO50248.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262353621|gb|EEZ02715.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639865|gb|EFF58139.1| KamA family protein [Bacteroides ovatus SD CC 2a] gi|294446730|gb|EFG15340.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b] Length = 712 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEERED--PIGDNNHSPL---- 86 TP +L+N + ND R +I L NI E+ED +G N + Sbjct: 242 TPYYLSLLNITGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPD 301 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + ++ + + L Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 Y +E +Q+ +++ TGGD L+ +K LQ +L + + +Q Sbjct: 362 LMTYFEEDTQLRDILITGGDALMSQNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQ 421 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN L+ L+E K I H P E + EA AI Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDILREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 482 KILSAGWIITNQLV 495 >gi|167763257|ref|ZP_02435384.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC 43183] gi|167698551|gb|EDS15130.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC 43183] Length = 699 Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 100/254 (39%), Gaps = 51/254 (20%) Query: 40 TPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL---- 86 TP +L+N ND R +I PQ E I ERED + G N + Sbjct: 237 TPYYLSLLNCTGSGYNDDSLRSYILYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPD 296 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV---------LSSKDTEA 133 I RYP+ +L + C C C R S++ K Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFEELHPKESWDKKLRR 356 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 + Y +E +Q+ +++ TGGD L+ +K L+ +L + + +Q Sbjct: 357 LMTYFEEDTQLRDILITGGDALMSQNKTLRNILDAVYRMAVRKRKANQERPEGEKYAELQ 416 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+P P RIN EL+ L+E + I H P E + EA I Sbjct: 417 RIRLGSRLPAYLPMRINDELVDILREFKEKASTVGIRQFIIQTHFQTPLEVTPEAEEGIR 476 Query: 229 RLANAGIILLSQSV 242 +L +AG ++ +Q V Sbjct: 477 KLLSAGWLITNQLV 490 >gi|71277819|ref|YP_270271.1| hypothetical protein CPS_3603 [Colwellia psychrerythraea 34H] gi|71143559|gb|AAZ24032.1| conserved domain protein [Colwellia psychrerythraea 34H] Length = 555 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 14/176 (7%) Query: 86 LKGIVHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G H+YP I K C +C +CFR V + + K+ + Y++ + Sbjct: 221 LDGSQHKYPQCQLIFDKTTQNCFSFCTYCFRHAQVRGDEDMFIQ-KEIDQIHRYLKVHEE 279 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINPE----- 195 + +++ TGGD + R ++ + L R + H++ +R +R P+ I Sbjct: 280 VTDMLITGGDGGYMPASRFEQYVTPLLEDRDLLHIKTVRLATRALTFQPEMILSSKYDKM 339 Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGIN 248 + + + G + H + P E + IAAI RL G+++ SQS ++ I+ Sbjct: 340 LAVFDKMHDNGIQLAWMAHFSTPRELLNPTTIAAIRRLQRHGVVIRSQSPMMNHIS 395 >gi|295087042|emb|CBK68565.1| L-lysine 2,3-aminomutase [Bacteroides xylanisolvens XB1A] Length = 713 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLIN--PHNPNDPIARQFIPQKEEL-----NILPEERED--PIGDNNHSPL---- 86 TP +L+N + ND R +I L NI E+ED +G N + Sbjct: 242 TPYYLSLLNITGYGYNDEAIRSYILYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPD 301 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + ++ + + L Sbjct: 302 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRR 361 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 Y +E +Q+ +++ TGGD L+ +K LQ +L + + +Q Sbjct: 362 LMTYFEEDTQLRDILITGGDALMSQNKTLQHILDAVYRMAVRKQKANLERPEGEKYAELQ 421 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN L+ L+E K I H P E + EA AI Sbjct: 422 RVRLGSRLLAYLPMRINDGLVDILREFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIR 481 Query: 229 RLANAGIILLSQSV 242 ++ +AG I+ +Q V Sbjct: 482 KILSAGWIITNQLV 495 >gi|226327320|ref|ZP_03802838.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198] gi|225204538|gb|EEG86892.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198] Length = 153 Score = 54.7 bits (130), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 5/91 (5%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 +PNDP+ Q + E I P DP+ D + + G++H+Y +R LL + C V CR Sbjct: 67 DPNDPLLLQVLTANAEFTITPGFSTDPL-DEQQNAVPGLLHKYQNRALLLVKGGCAVNCR 125 Query: 111 FCFRREM-VGSQKGTVLSSKDTEAALAYIQE 140 +CFRR KG + + + A+ YI++ Sbjct: 126 YCFRRHFPYEDNKG---NKANWQKAIEYIKK 153 >gi|163784748|ref|ZP_02179553.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1] gi|159879982|gb|EDP73681.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1] Length = 250 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 44/197 (22%), Positives = 89/197 (45%), Gaps = 13/197 (6%) Query: 154 PLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EA 203 PLI+ L++ ++ + I H++ +R ++ P R EL+ K + Sbjct: 1 PLIMKTHVLKQYIEPILEANIPHLKTIRIGTKALGFWPYRFLTDNDAQELLDLFKKIVDK 60 Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 G + H NH E ++E A+ ++ G ++ +QS +L+ IND+P++ A + + V Sbjct: 61 GYHLAYMAHFNHYKELETDEVKEAVQKIRETGAVIRTQSPILRHINDNPDVWAKMWKEQV 120 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + + PYY+ +F + I +I +K+SGL + + GK++I Sbjct: 121 KQGMIPYYMFMARDTGAQHYFGVPIVRAWEIFREAYQKVSGLARTVKGPSMSATPGKIRI 180 Query: 323 DTHNIKKVGNGSYCITD 339 + ++ Y + D Sbjct: 181 --LGVSEINGKKYIVLD 195 >gi|60682845|ref|YP_212989.1| hypothetical protein BF3383 [Bacteroides fragilis NCTC 9343] gi|60494279|emb|CAH09074.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] Length = 699 Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N ND R +I L NI ERED + G N + Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + + + + L Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 +Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN ELI+ L+E K I H P E + AI Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIR 478 Query: 229 RLANAGIILLSQSV 242 ++ +AG ++ +Q V Sbjct: 479 KILSAGWLITNQLV 492 >gi|53714863|ref|YP_100855.1| hypothetical protein BF3578 [Bacteroides fragilis YCH46] gi|52217728|dbj|BAD50321.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 699 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N ND R +I L NI ERED + G N + Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + + + + L Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 +Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN ELI+ L+E K I H P E + AI Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIR 478 Query: 229 RLANAGIILLSQSV 242 ++ +AG ++ +Q V Sbjct: 479 KILSAGWLITNQLV 492 >gi|301164314|emb|CBW23872.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 699 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N ND R +I L NI ERED + G N + Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + + + + L Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 +Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN ELI+ L+E K I H P E + AI Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIR 478 Query: 229 RLANAGIILLSQSV 242 ++ +AG ++ +Q V Sbjct: 479 KILSAGWLITNQLV 492 >gi|265766723|ref|ZP_06094552.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263253100|gb|EEZ24576.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 699 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N ND R +I L NI ERED + G N + Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + + + + L Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 +Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN ELI+ L+E K I H P E + AI Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIR 478 Query: 229 RLANAGIILLSQSV 242 ++ +AG ++ +Q V Sbjct: 479 KILSAGWLITNQLV 492 >gi|253565968|ref|ZP_04843422.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251945072|gb|EES85510.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 699 Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 63/254 (24%), Positives = 103/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL---- 86 TP +L+N ND R +I L NI ERED + G N + Sbjct: 239 TPYYLSLLNTSGEGYNDEAIRSYILYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPD 298 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ E + + + + + L Sbjct: 299 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRR 358 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 +Y +E +Q+ +++ TGGD L+ +K L+ +L+ + + +Q Sbjct: 359 LMSYFEEDTQLRDILITGGDALMSQNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQ 418 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+ P RIN ELI+ L+E K I H P E + AI Sbjct: 419 RVRLGSRLLAYLPMRINDELIEILREFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIR 478 Query: 229 RLANAGIILLSQSV 242 ++ +AG ++ +Q V Sbjct: 479 KILSAGWLITNQLV 492 >gi|229004623|ref|ZP_04162361.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4] gi|228756664|gb|EEM05971.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4] Length = 233 Score = 53.5 bits (127), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 9/158 (5%) Query: 174 HVQILRFHSRVPIVDPQRI-----NPELIQCLK---EAGKPVYIAIHANHPYEFSEEAI- 224 H++ +R ++ P R + EL+Q K ++GK + I H H E Sbjct: 22 HIRNIRIGTKALTYWPNRFISDSDSEELLQFFKKIIDSGKSLAIMAHFTHWRELEAPLTQ 81 Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284 AI ++ + G I+ SQS ++ IN++PE L V+L I PYY+ +F+ Sbjct: 82 VAIKKIRDVGAIIRSQSPIIGHINNNPETWKILWEKQVQLGIIPYYMFVERDTGSNRYFQ 141 Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + + E I ++SGL + + YGK+++ Sbjct: 142 VPLIEAYNIYRDAISRVSGLARTARGPVMSTTYGKIEV 179 >gi|317479408|ref|ZP_07938542.1| KamA family protein [Bacteroides sp. 4_1_36] gi|316904482|gb|EFV26302.1| KamA family protein [Bacteroides sp. 4_1_36] Length = 698 Score = 53.1 bits (126), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL---- 86 TP +L+N +D R +I PQ E I ERED + G N + Sbjct: 237 TPYYLSLLNCTGSGYDDEALRSYILYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPD 296 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ + + + T+ + E L Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRR 356 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 AY +E +Q+ +++ TGGD L+ +K L +L + + +Q Sbjct: 357 LMAYFEEDTQLRDILITGGDALMSQNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQ 416 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+P P RIN L++ L+E + I H P E + EA I Sbjct: 417 RVRLGSRLPAYLPMRINDGLVEILREFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIR 476 Query: 229 RLANAGIILLSQSV 242 +L AG ++ +Q V Sbjct: 477 KLLAAGWLIDNQLV 490 >gi|160888851|ref|ZP_02069854.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492] gi|156861750|gb|EDO55181.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492] Length = 698 Score = 52.8 bits (125), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 65/254 (25%), Positives = 103/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL---- 86 TP +L+N +D R +I PQ E I ERED + G N + Sbjct: 237 TPYYLSLLNCTGSGYDDEALRSYILYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPD 296 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL-- 135 I RYP+ +L + C C C F+ + + + T+ + E L Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRR 356 Query: 136 --AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 AY +E +Q+ +++ TGGD L+ +K L +L + + +Q Sbjct: 357 LMAYFEEDTQLRDILITGGDALMSQNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQ 416 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--------IAIHANHPYEFSEEAIAAIS 228 +R SR+P P RIN L++ L+E + I H P E + EA I Sbjct: 417 RVRLGSRLPAYLPMRINDGLVEILREFKEKASTIGIHQFIIQTHFQTPLEVTPEAAEGIR 476 Query: 229 RLANAGIILLSQSV 242 +L AG ++ +Q V Sbjct: 477 KLLAAGWLIDNQLV 490 >gi|313158793|gb|EFR58178.1| KamA family protein [Alistipes sp. HGB5] Length = 698 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 25/133 (18%) Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQI 177 + Y +E +Q+ +++ TGGD L+ +K L +L+ + + +Q Sbjct: 359 MTYFEEDTQLRDILITGGDALMSQNKTLHNILEAVYRMACRKRKANAGRPDGEKYAELQR 418 Query: 178 LRFHSRVPIVDPQRINPELIQCLKE--------AGKPVYIAIHANHPYEFSEEAIAAISR 229 +R SR+P P RI+ L++ L+E + I H P E + EA AI R Sbjct: 419 VRLGSRLPAYLPMRIDDGLVEVLREFKQKASAVGVRQFIIQTHFQSPLEVTPEAQEAIRR 478 Query: 230 LANAGIILLSQSV 242 + AG ++ +Q V Sbjct: 479 ILAAGWLVTNQLV 491 >gi|58426923|gb|AAW75960.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 237 Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/63 (36%), Positives = 34/63 (53%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP+ RQ +P E+ +P D +GD G++ +Y R LL C V+CR+C Sbjct: 75 HDPLLRQVLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYC 134 Query: 113 FRR 115 FRR Sbjct: 135 FRR 137 >gi|270293625|ref|ZP_06199827.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275092|gb|EFA20952.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 698 Score = 50.8 bits (120), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 64/254 (25%), Positives = 102/254 (40%), Gaps = 51/254 (20%) Query: 40 TPVIANLINPHNP--NDPIARQFI---PQKEEL--NILPEEREDPI--GDNNHSPL---- 86 TP +L+N +D R +I PQ E I ERED + G N + Sbjct: 237 TPYYLSLLNCTGSGYDDEALRSYILYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPD 296 Query: 87 -KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALA- 136 I RYP+ +L + C C C F+ + + + T+ + E L Sbjct: 297 GHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRR 356 Query: 137 ---YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHVQ 176 Y +E +Q+ +++ TGGD L+ +K L +L + + +Q Sbjct: 357 LMDYFEEDTQLRDILITGGDALMSQNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQ 416 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYIAIHANHPYEFSEEAIAAIS 228 +R SR+P P RIN L++ L+E + I H P E + EA I Sbjct: 417 RVRLGSRLPAYLPMRINDGLVEILREFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIR 476 Query: 229 RLANAGIILLSQSV 242 +L AG ++ +Q V Sbjct: 477 KLLAAGWLIDNQLV 490 >gi|332877293|ref|ZP_08445041.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684676|gb|EGJ57525.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 707 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 51/257 (19%) Query: 37 IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89 + +TP +L+NP +D R ++ L I ERED + + + + Sbjct: 233 VFVTPYYLSLLNPTGKGYDDAAIRSYVIYSSRLVETFGGIRAWEREDIVEEGKPNVAGWL 292 Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131 + RYP+ +L + C C C R S++ L K+ Sbjct: 293 LPGGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSRRLNFELEKLKPKENWNTR 352 Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL-----------------RYIK 173 + Y + +QI +++ TGGD L+ + L+ +L + Sbjct: 353 LRKLMDYFEHDTQIRDILITGGDALMSRNATLRNILDAVCKMAVRKRQANLSRPDGEKYA 412 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLK-------EAG-KPVYIAIHANHPYEFSEEAIA 225 +Q +R +R+P+ P R++ EL+ L+ EAG +++ H P E + E+ Sbjct: 413 ELQRVRLGTRLPVYLPMRVDDELLDILRDFRQKAAEAGITQLFVQTHFQSPLEVTPESRE 472 Query: 226 AISRLANAGIILLSQSV 242 AI R+ + G + +Q V Sbjct: 473 AIRRILSTGWAVTNQLV 489 >gi|301310737|ref|ZP_07216676.1| KamA family protein [Bacteroides sp. 20_3] gi|300832311|gb|EFK62942.1| KamA family protein [Bacteroides sp. 20_3] Length = 704 Score = 49.7 bits (117), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 59/255 (23%), Positives = 104/255 (40%), Gaps = 51/255 (20%) Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90 +TP +L+N + +D R +I EL +I E+ED + + + ++ Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303 Query: 91 ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132 RYP+ +L + C C C R S++ VL K++ Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEVLKPKESWDRKLR 363 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175 + Y +E +Q+ +++ TGGD L+ + L+K+L+ + + + Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRPEGEKYAEL 423 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227 Q +R SR+ P R+ EL+ L+E + YI H P E + EA AI Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483 Query: 228 SRLANAGIILLSQSV 242 + AG + +Q V Sbjct: 484 EAILAAGWTITNQLV 498 >gi|330995846|ref|ZP_08319742.1| KamA family protein [Paraprevotella xylaniphila YIT 11841] gi|329574377|gb|EGG55948.1| KamA family protein [Paraprevotella xylaniphila YIT 11841] Length = 707 Score = 49.3 bits (116), Expect = 9e-04, Method: Compositional matrix adjust. Identities = 56/257 (21%), Positives = 103/257 (40%), Gaps = 51/257 (19%) Query: 37 IALTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGI 89 + +TP +L+NP +D R ++ L I ERED + + + + Sbjct: 233 VFVTPYYLSLLNPTGKGYDDAAIRSYVIYSSRLVETFGGIRAWEREDIVEEGKPNVAGWL 292 Query: 90 V-------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQKGTV----LSSKDT---- 131 + RYP+ +L + C C C R S++ L K+ Sbjct: 293 LPGGHNIHRRYPEVAILIPDTMGRACGGLCASCQRMYDFQSRRLNFELEKLKPKENWNTR 352 Query: 132 -EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL-----------------RYIK 173 + Y + +QI +++ TGGD L+ + L+ +L + Sbjct: 353 LRKLMDYFEHDTQIRDILITGGDALMSRNATLRNILDAVCKMAVRKRQANLSRPDGEKYA 412 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLK-------EAG-KPVYIAIHANHPYEFSEEAIA 225 +Q +R +R+P+ P R++ EL+ L+ EAG +++ H P E + E+ Sbjct: 413 ELQRVRLGTRLPVYLPMRVDDELLDILRDFRQKAAEAGITQLFVQTHFQSPLEVTPESRE 472 Query: 226 AISRLANAGIILLSQSV 242 AI R+ + G + +Q V Sbjct: 473 AIRRILSTGWAVTNQLV 489 >gi|255281034|ref|ZP_05345589.1| PDZ domain protein [Bryantella formatexigens DSM 14469] gi|255268482|gb|EET61687.1| PDZ domain protein [Bryantella formatexigens DSM 14469] Length = 456 Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust. Identities = 50/182 (27%), Positives = 78/182 (42%), Gaps = 39/182 (21%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 H C C FCF +M + T L KD + L+++Q G+ + L++ Sbjct: 89 HSCRNRCIFCFIDQMPPGMRKT-LYFKDDDTRLSFLQ------------GNYVTLTN--- 132 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 + + QILR+H + Q +NP+L +C K G F+ E Sbjct: 133 ------IGEMDMEQILRYHLSPINISFQTMNPQL-RC-KMLGN------------RFAGE 172 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 A+ + RLA AGI + Q VL KG+ND E+ ++ + R PY + G + Sbjct: 173 ALKKVDRLAEAGIEMNGQIVLCKGVNDGEELEYSIRQL---TRYLPYLRSVSVVPVGLTR 229 Query: 283 FR 284 FR Sbjct: 230 FR 231 >gi|298375250|ref|ZP_06985207.1| KamA family protein [Bacteroides sp. 3_1_19] gi|298267750|gb|EFI09406.1| KamA family protein [Bacteroides sp. 3_1_19] Length = 704 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%) Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90 +TP +L+N + +D R +I EL +I E+ED + + + ++ Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303 Query: 91 ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132 RYP+ +L + C C C R S++ L K++ Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 363 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175 + Y +E +Q+ +++ TGGD L+ + L+K+L+ + + + Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRSEGEKYAEL 423 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227 Q +R SR+ P R+ EL+ L+E + YI H P E + EA AI Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483 Query: 228 SRLANAGIILLSQSV 242 + AG + +Q V Sbjct: 484 EAILAAGWTITNQLV 498 >gi|150007262|ref|YP_001302005.1| hypothetical protein BDI_0607 [Parabacteroides distasonis ATCC 8503] gi|149935686|gb|ABR42383.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 704 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%) Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90 +TP +L+N + +D R +I EL +I E+ED + + + ++ Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303 Query: 91 ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132 RYP+ +L + C C C R S++ L K++ Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 363 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175 + Y +E +Q+ +++ TGGD L+ + L+K+L+ + + + Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRPEGEKYAEL 423 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227 Q +R SR+ P R+ EL+ L+E + YI H P E + EA AI Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483 Query: 228 SRLANAGIILLSQSV 242 + AG + +Q V Sbjct: 484 EAILAAGWTITNQLV 498 >gi|256839551|ref|ZP_05545060.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256738481|gb|EEU51806.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 704 Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%) Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90 +TP +L+N + +D R +I EL +I E+ED + + + ++ Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303 Query: 91 ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132 RYP+ +L + C C C R S++ L K++ Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 363 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175 + Y +E +Q+ +++ TGGD L+ + L+K+L+ + + + Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRSEGEKYAEL 423 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227 Q +R SR+ P R+ EL+ L+E + YI H P E + EA AI Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483 Query: 228 SRLANAGIILLSQSV 242 + AG + +Q V Sbjct: 484 EAILAAGWTITNQLV 498 >gi|262382166|ref|ZP_06075304.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262297343|gb|EEY85273.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 704 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%) Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90 +TP +L+N + +D R +I EL +I E+ED + + + ++ Sbjct: 244 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 303 Query: 91 ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132 RYP+ +L + C C C R S++ L K++ Sbjct: 304 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 363 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175 + Y +E +Q+ +++ TGGD L+ + L+K+L+ + + + Sbjct: 364 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRPEGEKYAEL 423 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227 Q +R SR+ P R+ EL+ L+E + YI H P E + EA AI Sbjct: 424 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 483 Query: 228 SRLANAGIILLSQSV 242 + AG + +Q V Sbjct: 484 EAILAAGWTITNQLV 498 >gi|255014113|ref|ZP_05286239.1| hypothetical protein B2_09392 [Bacteroides sp. 2_1_7] Length = 706 Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust. Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 51/255 (20%) Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPIGDNNHSPLKGIV- 90 +TP +L+N + +D R +I EL +I E+ED + + + ++ Sbjct: 246 VTPYYLSLLNIEHEGYDDATVRSYIMYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLP 305 Query: 91 ------HRYPDRILL---KLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDT-----E 132 RYP+ +L + C C C R S++ L K++ Sbjct: 306 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFEALKPKESWDRKLR 365 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175 + Y +E +Q+ +++ TGGD L+ + L+K+L+ + + + Sbjct: 366 RLMRYFEEDAQLRDILITGGDALMSQNATLRKILEAVYKMAVRKRKANESRPEGEKYAEL 425 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV--------YIAIHANHPYEFSEEAIAAI 227 Q +R SR+ P R+ EL+ L+E + YI H P E + EA AI Sbjct: 426 QRVRLGSRLLAYLPLRVTDELVGILREFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAI 485 Query: 228 SRLANAGIILLSQSV 242 + AG + +Q V Sbjct: 486 EAILAAGWTITNQLV 500 >gi|154492755|ref|ZP_02032381.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC 43184] gi|154087060|gb|EDN86105.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC 43184] Length = 703 Score = 47.4 bits (111), Expect = 0.003, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 101/255 (39%), Gaps = 51/255 (20%) Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL--- 86 +TP +L+N + +D R +I EEL I E+ED + G N + Sbjct: 243 VTPYYLSLLNTNTSGYDDATIRSYILYSEELVDTYGRIKAWEKEDIVVSGQPNAAGWLLP 302 Query: 87 --KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVG----SQKGTVLSSKDTE 132 I RYP+ +L + C C C F+ E + S K K Sbjct: 303 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFESLKPKETWDKKLR 362 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175 + Y +E +Q+ +++ TGGD L+ + L+ +L + + + Sbjct: 363 RLMRYFEEDAQLRDILITGGDALMSQNATLRNILDAVYKMAVRKRKANESRPEGEKYAEL 422 Query: 176 QILRFHSRVPIVDPQRINPELIQCLK-------EAGKPVY-IAIHANHPYEFSEEAIAAI 227 Q +R SR+ P RI EL+ L+ G + I H P E + EA AI Sbjct: 423 QRVRLGSRLLAYLPLRITDELVGILRSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAI 482 Query: 228 SRLANAGIILLSQSV 242 + +AG I+ +Q V Sbjct: 483 EAILSAGWIITNQLV 497 >gi|218260892|ref|ZP_03475966.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii DSM 18315] gi|218224314|gb|EEC96964.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii DSM 18315] Length = 703 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 63/255 (24%), Positives = 100/255 (39%), Gaps = 51/255 (20%) Query: 39 LTPVIANLINPHNP--NDPIARQFIPQKEEL-----NILPEEREDPI--GDNNHSPL--- 86 +TP +L+N + +D R +I EEL I E+ED + G N + Sbjct: 243 VTPYYLSLLNTNTSGYDDATIRSYILYSEELVDTYGRIKAWEKEDIVVSGQPNAAGWLLP 302 Query: 87 --KGIVHRYPDRILL---KLLHVCPVYCRFC-----FRREMVG----SQKGTVLSSKDTE 132 I RYP+ +L + C C C F+ E + S K K Sbjct: 303 EGHNIHRRYPEVAILIPDSMGRACGGLCASCQRMYDFQSERLNFDFESLKPKEAWDKKLR 362 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----------------KHV 175 + Y +E +Q+ +++ TGGD L+ + L +L + + + Sbjct: 363 RLMRYFEEDAQLRDILITGGDALMSQNATLCNILDAVYKMAVRKRKANESRPKGEKYAEL 422 Query: 176 QILRFHSRVPIVDPQRINPELIQCLK-------EAGKPVY-IAIHANHPYEFSEEAIAAI 227 Q +R SR+ P RI EL+ L+ G + I H P E + EA AI Sbjct: 423 QRVRLGSRLLAYLPLRITDELVDILRSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAI 482 Query: 228 SRLANAGIILLSQSV 242 + +AG I+ +Q V Sbjct: 483 EAILSAGWIITNQMV 497 >gi|312129610|ref|YP_003996950.1| oxygeN-independent coproporphyrinogen iii oxidase [Leadbetterella byssophila DSM 17132] gi|311906156|gb|ADQ16597.1| oxygen-independent coproporphyrinogen III oxidase [Leadbetterella byssophila DSM 17132] Length = 376 Score = 47.0 bits (110), Expect = 0.004, Method: Compositional matrix adjust. Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 3/97 (3%) Query: 108 YCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 YC F F ++ K K+ E +Y+ EK+ + + F GG P +LS+ L+KVLK Sbjct: 16 YCDFHFSTQLSYKAKMVDAMCKEIELNSSYLVEKN-LETLYFGGGTPSLLSNSELEKVLK 74 Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 +++Y H + +P I+P+ +Q KE G Sbjct: 75 SIQY--HYSLENIKEFTLEANPDDIHPDRLQLWKELG 109 >gi|154308719|ref|XP_001553695.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10] gi|150852733|gb|EDN27925.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10] Length = 309 Score = 47.0 bits (110), Expect = 0.005, Method: Compositional matrix adjust. Identities = 31/85 (36%), Positives = 51/85 (60%), Gaps = 4/85 (4%) Query: 19 LIKKEQIDEIKEISN--HYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEER 74 + +++ I+++KE SI L P + ++I+ NP DPI RQFIP K +L P+ Sbjct: 213 VTREDFIEDVKEGIKLAPMSIRLPPHVLSIIDWENPFEDPIRRQFIPMKSSKLEDHPKVE 272 Query: 75 EDPIGDNNHSPLKGIVHRYPDRILL 99 D + +++ SP++G VHRY D+ L Sbjct: 273 LDSLHESDDSPVEGFVHRYYDKALF 297 >gi|213859667|ref|ZP_03385371.1| hypothetical protein SentesT_25317 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 81 Score = 46.2 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%) Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 ++E I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 2 QDEFVIAPGFSTDPL-EEQHSVVSGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQ 60 Query: 124 TVLSSKDTEAALAYIQEKSQIWE 146 + ++ + AL Y+ ++ E Sbjct: 61 G--NKRNWQTALEYVAAHPELDE 81 >gi|126458652|ref|YP_001054930.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM 11548] gi|126248373|gb|ABO07464.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM 11548] Length = 309 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 43/186 (23%), Positives = 86/186 (46%), Gaps = 32/186 (17%) Query: 96 RILLKLLHV----CPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQIWEVIF 149 R LK+ +V C C FC G Q+ G+ L+++D E A +Y+ K +++ Sbjct: 8 RPFLKMRYVVDDECNYNCLFC---HFEGQQRRQGSTLTAEDYEFA-SYVFSKLGVYDFKL 63 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208 TGG+PL+ + + K+++ + + + V I + + L +AG + + Sbjct: 64 TGGEPLL--RRDIDKIVEAIARV---------AAVSITTNGLLLRRWVDRLYKAGLRKIN 112 Query: 209 IAIHANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 ++IH P ++S+ E + + N G+ + +V+L+GIN D + + L+ Sbjct: 113 VSIHTADPEKYSKVVGAPTWAFKEVLRGLQESRNRGLAIKLNAVVLRGINTDDKSVKELV 172 Query: 259 RTFVEL 264 + L Sbjct: 173 KLAASL 178 >gi|328884100|emb|CCA57339.1| Lysine 2,3-aminomutase [Streptomyces venezuelae ATCC 10712] Length = 431 Score = 45.1 bits (105), Expect = 0.015, Method: Compositional matrix adjust. Identities = 62/272 (22%), Positives = 102/272 (37%), Gaps = 33/272 (12%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 ER DP + G+ HRYP+ +L+ C C C R Sbjct: 95 RERLDPHPAGRDA--AGLRHRYPETLLVLPGQGRTCHGPCASCSRWPRFAGDPVRGRELG 152 Query: 130 DTEAALAYIQEKSQIWEVIFTG-----GDPLILSHKRLQKVLKTLRYIKHVQIL------ 178 EA + +I +V+F G G L+T R +V L Sbjct: 153 GPEALGDRLDRHPEITDVLFAGVPFAGGSGADPPDPPDPFELRTARLAPYVTALLDRPGV 212 Query: 179 -------RFHSRVP--IVDPQRINPELIQCLKE---AGKPVYIAIHANHPYEFS-EEAIA 225 R SR P +D + +L++ L+ +G+ + + ++ HP E A Sbjct: 213 RTVRIVTRAVSRFPGRFLDAPDAD-DLLRLLERVVASGRHLVLTLYVCHPRELRPATARR 271 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 A+ RLA G +L ++ +L+ +NDD + A + R L + PY + FRL Sbjct: 272 ALGRLAATGAVLRTRGAVLRRVNDDAALWARMWREQTALGLAPYGMLVERGGGVRRCFRL 331 Query: 286 TIEEGQKIVASLKEKISGL----CQPFYILDL 313 + ++ A ++ GL C P +L Sbjct: 332 PLARVLEVHAEALRRVPGLAGRVCGPVMPTEL 363 >gi|40217429|emb|CAE46362.1| hypothetical protein C2_0004 [uncultured archaeon] gi|268323812|emb|CBH37400.1| hypothetical protein, radical SAM superfamily [uncultured archaeon] Length = 317 Score = 44.7 bits (104), Expect = 0.024, Method: Compositional matrix adjust. Identities = 58/209 (27%), Positives = 96/209 (45%), Gaps = 26/209 (12%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQI-WEVIFTGGDPLIL 157 +L C +CR CFR G GT+LS ++T A A ++ ++ + + TGG+P L Sbjct: 21 MLTGCDFHCRGCFRPARDGG--GTLLSPEETLKRAEQACLKHYGKLPTKAMITGGEP-TL 77 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYI 209 + L ++K L +I+ + I + N LKEAG K Sbjct: 78 DKEFLLTLVKGLEEKGFEEIILMSNGYEI--GREGNGNYAAELKEAGLTEAHIDIKAFSD 135 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVE 263 IH + + ++ + A+ L + G+ LL Q+V + GI D EI L+N+ + ++ Sbjct: 136 EIHIWYTGKSNKPVLNAVRMLNDTGMELLIQTVYMPGIVDVEEIEQIAIFLSNV-NSNIK 194 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 LRI P+ P A R TIE+ ++ Sbjct: 195 LRINPF---APTFAFERVTERPTIEDMER 220 >gi|148270145|ref|YP_001244605.1| ribosomal RNA large subunit methyltransferase N [Thermotoga petrophila RKU-1] gi|281412513|ref|YP_003346592.1| radical SAM enzyme, Cfr family [Thermotoga naphthophila RKU-10] gi|205829917|sp|A5ILF6|RLMN_THEP1 RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|147735689|gb|ABQ47029.1| radical SAM enzyme, Cfr family [Thermotoga petrophila RKU-1] gi|281373616|gb|ADA67178.1| radical SAM enzyme, Cfr family [Thermotoga naphthophila RKU-10] Length = 343 Score = 44.3 bits (103), Expect = 0.030, Method: Compositional matrix adjust. Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 43/213 (20%) Query: 82 NHSPLKGIVHRYPDRIL--LKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEA 133 + + ++ ++ +PDRI + CPV C FC F R + + + S + E Sbjct: 86 DGNTIESVMLFHPDRITACISTQVGCPVKCIFCATGMSGFVRNLTTGEIVAQILSMEKE- 144 Query: 134 ALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 EK +I V++ G G+PL+ + +K++R + H ++ R + I Sbjct: 145 ------EKKKIGNVVYMGMGEPLL----NYENTIKSIRTLNHKKMGNIGIRRITISTVGI 194 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA------AISRLANA--------GIILL 238 +IQ L E G V +A+ + P F + + +I + NA G + Sbjct: 195 PDRIIQ-LAEEGLDVKLALSLHAPTNFKRDQLVPLNKKYSIEEILNAVKIYQKKTGNRVT 253 Query: 239 SQSVLLKGINDD-------PEILANLMRTFVEL 264 + VL+KG+ND+ EIL N M+ FV L Sbjct: 254 IEYVLIKGMNDEISDAKKLAEILKN-MKVFVNL 285 >gi|257063684|ref|YP_003143356.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] gi|256791337|gb|ACV22007.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] Length = 457 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 55/244 (22%), Positives = 90/244 (36%), Gaps = 45/244 (18%) Query: 24 QIDEIKEISNHYSIALTP-VIANLINPHNPNDPIARQFIPQKEELNI----LPEEREDPI 78 +I E++E S + P I +N H D I Q+ E+ + L + + Sbjct: 20 RILEVEEYSPAFDAGFEPGCIVTAVNGHPLRDMIDWQWYSDGYEVELSYIDLDGDEGTVV 79 Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 + GI D + + VC C FCF R M+ + L +D + L+++ Sbjct: 80 LEREEGESWGITF---DGAIFDGIRVCRNACMFCFMR-MLPKESRDTLMLRDDDWRLSFL 135 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 Q FT L L +I H V P R++ + Sbjct: 136 QGN-------FT--------------TLTNLSEEDADEITERH-----VSPLRVS---LH 166 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 C+ + I HA+H + + +L GI L Q VLL G+ND E++ L Sbjct: 167 CISPEVRSKMIGRHADH-------GVRMMEKLLAGGIELYMQIVLLPGVNDGAELMKTLA 219 Query: 259 RTFV 262 ++ Sbjct: 220 WAYL 223 >gi|15607116|ref|NP_214498.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5] gi|7674126|sp|O67929|MOAA_AQUAE RecName: Full=Molybdenum cofactor biosynthesis protein A gi|2984358|gb|AAC07877.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5] Length = 320 Score = 43.9 bits (102), Expect = 0.036, Method: Compositional matrix adjust. Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 23/192 (11%) Query: 99 LKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C + C FC +E K +L+ ++ E + I K + +V TGG+PL+ Sbjct: 15 ISLTDRCNLRCNFCMPPGKEYNFLPKRQLLTPEEIEEYVK-IFAKLGVEKVRLTGGEPLL 73 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANH 215 + L+++++ + ++ ++ + + + E ++ LKEAG K + +++H+ + Sbjct: 74 --REDLEEIIQRISKVEGIKDIALTTNGVFL------KERLKALKEAGLKRITVSVHSLN 125 Query: 216 PYEFSE---------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 P + + E I R G + SV++KG NDD EIL +L R F L + Sbjct: 126 PEKNQKLVNRSVNLGEVFEVIIRAKELGFKVKVNSVIIKGFNDD-EIL-DLARFFKNLGV 183 Query: 267 KPYYLHHPDLAA 278 ++ + D+ Sbjct: 184 TLRFIEYMDVGT 195 >gi|255568836|ref|XP_002525389.1| catalytic, putative [Ricinus communis] gi|223535352|gb|EEF37027.1| catalytic, putative [Ricinus communis] Length = 861 Score = 43.9 bits (102), Expect = 0.037, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 27/176 (15%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161 C + C+FC+ M + T D A + I V+F G G+PL + Sbjct: 190 CAMNCQFCYTGRMGLKRHLTTAEIVDQVVSAQRLLTSDAGSITNVVFMGMGEPL----QN 245 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221 ++ V+K + H Q L F R + + P+L + L+E+ +A+ N + Sbjct: 246 IENVIKAADIMVHDQGLHFSPRKVTISTSGLVPQLKRFLRESN--CALAVSLNATTDEVR 303 Query: 222 EAIAAISRLANAGIIL---------------LSQSVLLKGIND---DPEILANLMR 259 I I+R N G++L L + V+L G+ND D E L++L++ Sbjct: 304 NWIMPINRKYNLGLLLDTLRKELHFKNNYKVLFEYVMLAGVNDSLEDAERLSDLVQ 359 >gi|52549924|gb|AAU83773.1| coenzyme PQQ synthesis protein [uncultured archaeon GZfos33H6] Length = 317 Score = 43.5 bits (101), Expect = 0.050, Method: Compositional matrix adjust. Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 26/209 (12%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQI-WEVIFTGGDPLIL 157 +L C +CR CFR G GT+LS ++T A A ++ ++ + + TGG+P L Sbjct: 21 MLTGCDFHCRGCFRPARDGG--GTLLSPEETLKRAEQACLKHYGKLPTKAMITGGEP-TL 77 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYI 209 + L ++K L +I+ + I + N LK+AG K Sbjct: 78 DKEFLLTLVKGLEEKGFEEIILMSNGYEI--GREGNGNYAAELKDAGLTEAHIDIKAFSD 135 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVE 263 IH + + ++ + A+ L + G+ LL Q+V + GI D EI L+N+ + ++ Sbjct: 136 EIHIWYTGKSNKPVLNAVRMLNDTGVELLIQTVYMPGIVDVEEIEQIAIFLSNV-NSDIK 194 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 LRI P+ P A R TIE+ ++ Sbjct: 195 LRINPF---APTFAFERVTERPTIEDMER 220 >gi|310827022|ref|YP_003959379.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum KIST612] gi|308738756|gb|ADO36416.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum KIST612] Length = 318 Score = 43.1 bits (100), Expect = 0.062, Method: Compositional matrix adjust. Identities = 60/240 (25%), Positives = 107/240 (44%), Gaps = 29/240 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + +C + C +C E V ++ T LS ++ EA L I ++ TGG+PL+ Sbjct: 14 ISITDLCNLRCVYCMPEEGVPKRRHATNLSFEEIEA-LVRAGADMGIDKIRLTGGEPLVR 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 + + ++K L I ++ + ++ PE+ LK AG + V I++ P Sbjct: 73 AG--VLDLVKKLGAIPGIRDFAMTTNGILL------PEMAADLKAAGLRRVNISLDTFDP 124 Query: 217 YEFS--------EEAIAAISRLANAGIILLS-QSVLLKGINDDP-EILANLMRTF-VELR 265 +++ E+A+A I AG+ L +VL+KG NDD E + +T VE+R Sbjct: 125 EKYARITRCGRLEDALAGIDAAVAAGLTPLKINTVLIKGFNDDEIEAFVHYTKTRPVEVR 184 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY---ILDLPGGYGKVKI 322 ++ L G + G+ ++A + E + P + LPG GKV + Sbjct: 185 ----FIELMPLGDGAEYAFGQYMPGEAVLARVPELVPAASPPGAPARLCTLPGALGKVGL 240 >gi|225028013|ref|ZP_03717205.1| hypothetical protein EUBHAL_02282 [Eubacterium hallii DSM 3353] gi|224954727|gb|EEG35936.1| hypothetical protein EUBHAL_02282 [Eubacterium hallii DSM 3353] Length = 444 Score = 42.7 bits (99), Expect = 0.089, Method: Compositional matrix adjust. Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 52/164 (31%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ H C C FCF +M + T L KD ++ L+++Q G+ + L Sbjct: 83 LMDEYHSCCNKCMFCFIDQMPPGMRDT-LYFKDDDSRLSFLQ------------GNYITL 129 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 ++ R + + + ++Y H+ P+ I++H +P Sbjct: 130 TNMRDKDIERVIKY--HLS-----------------------------PINISVHTTNPE 158 Query: 218 --------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 F+ + + I R AGI + SQ VL +G+ND+ E+ Sbjct: 159 LRCKMLHNRFAGDVLDKIGRFYEAGIRMNSQVVLCQGLNDEEEL 202 >gi|258513433|ref|YP_003189655.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257777138|gb|ACV61032.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 452 Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust. Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 15/136 (11%) Query: 39 LTPVIANLINPHNPNDPIARQFIPQ-KEELNILPEE----REDPIGDNNHSPLKGIVHRY 93 L+ I +++N H D + Q I +E+N L +E EDP+ +N++ P +G+V Sbjct: 36 LSLSIEDILNKHR--DIYSEQEITGVCDEINELRKEGLLFSEDPLQNNDYLPGEGVVKA- 92 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIFT 150 + L L H C + CR+CF + ++ + A+ ++ + S + EV F Sbjct: 93 ---LCLHLAHDCNMRCRYCFAGQGKFGGSSDLMPLNVGKKAMEFLIKSSGSRRNIEVDFF 149 Query: 151 GGDPLILSHKRLQKVL 166 GG+PL ++ K LQ ++ Sbjct: 150 GGEPL-MNFKVLQDLV 164 >gi|296271625|ref|YP_003654256.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter nitrofigilis DSM 7299] gi|296095800|gb|ADG91750.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter nitrofigilis DSM 7299] Length = 482 Score = 42.7 bits (99), Expect = 0.090, Method: Compositional matrix adjust. Identities = 55/232 (23%), Positives = 91/232 (39%), Gaps = 37/232 (15%) Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK-----GT 124 L +E D I NNH H++ RI + + C + C +C R+ ++ Sbjct: 14 LQQEVMDKI--NNHPCYSEGAHQHYARIHVAVAPACNIQCNYCNRKFDCSNESRPGVTSA 71 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV---QILRFH 181 LS +D + Y+ Q V+ G L++ + K T R + Q L Sbjct: 72 KLSPEDAVKKVLYVGGDIQQLSVVGIAGPGDALANPK--KTFDTFRMLHEKAPDQKLCLS 129 Query: 182 S---RVPI---------VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS--------E 221 + R+P VD + + E G +Y +H NH F E Sbjct: 130 TNGLRLPDYVDEMVKYNVDHVTVTINSVDPTGEIGAKIYPWVHWNHEKVFGAEGAKILLE 189 Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 + + I L GI++ + SVL+ G+ND L N+ + EL + +LH+ Sbjct: 190 QQLKGIKMLTERGILVKANSVLIPGVNDKE--LVNVAKKLKELNV---FLHN 236 >gi|319790295|ref|YP_004151928.1| radical SAM enzyme, Cfr family [Thermovibrio ammonificans HB-1] gi|317114797|gb|ADU97287.1| radical SAM enzyme, Cfr family [Thermovibrio ammonificans HB-1] Length = 345 Score = 42.7 bits (99), Expect = 0.093, Method: Compositional matrix adjust. Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 31/176 (17%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVIFTG-GDPLIL 157 CP CRFC + ++ G + E YIQ E +I V+F G G+PL+ Sbjct: 110 CPAGCRFC-----LTAKDGFTRNLTAGEIVDQYIQVQRDVGENRRISNVVFMGMGEPLL- 163 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA--- 213 V K + + H +L +R V I P + + KE K + +++HA Sbjct: 164 ---NFDNVKKAVEIMTHRDMLDLSTRKVTVSTVGIVPGIDRMAKEMNKVKLAVSLHATTD 220 Query: 214 ---------NHPYEFSEEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILANLMR 259 N Y E +AA+ R A+ ++ + V+LKG+ND E L++ Sbjct: 221 EVRNMLVPLNRKYPIGE-IMAALRRYPADNNRRIMIEYVMLKGVNDSLEDARRLVK 275 >gi|161527549|ref|YP_001581375.1| radical SAM protein [Nitrosopumilus maritimus SCM1] gi|160338850|gb|ABX11937.1| Radical SAM domain protein [Nitrosopumilus maritimus SCM1] Length = 237 Score = 42.4 bits (98), Expect = 0.098, Method: Compositional matrix adjust. Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 8/107 (7%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y + L L CP C +C +E + GT S +D L K+Q ++V FTGG Sbjct: 19 YGTKTLFVRLAGCPFTCFYCDTKESLPLDSGTEYSIEDANQ-LIDSNLKNQTYKVNFTGG 77 Query: 153 DPLI------LSHKRLQ-KVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 DPLI L K +Q K + T I RF+ +P +D +I Sbjct: 78 DPLIQHQAVALLAKHIQEKKIPTYLESSCFDIDRFNHVLPFIDIVKI 124 >gi|90416699|ref|ZP_01224629.1| molybdenum cofactor biosynthesis protein A [marine gamma proteobacterium HTCC2207] gi|90331452|gb|EAS46688.1| molybdenum cofactor biosynthesis protein A [marine gamma proteobacterium HTCC2207] Length = 336 Score = 42.4 bits (98), Expect = 0.10, Method: Compositional matrix adjust. Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 27/210 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFT 150 R D + L + C + C +C EM K +LS ++ +AA A+++ I ++ T Sbjct: 18 RSVDYLRLSVTDRCNLRCTYCMAEEMTFLPKQQILSLEELRDAATAFVELG--IRKIRLT 75 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYI 209 GG+PLI + + K++ +L + + L + ++ P + Q LK+AG + I Sbjct: 76 GGEPLI--RRDILKLVSSLSALPGLDELTMTTNGLLL------PTMAQPLKDAGISRLNI 127 Query: 210 AIHANHPYEFSE-----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 ++ + F + E I A + + I L +V+L G NDD I +L Sbjct: 128 SVDSLKAERFKQLTRVGDLSQVLEGIHAANAVGFGKIKL--NAVILAGFNDDEVI--DLA 183 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288 R V+ + ++ L +SH R+ + Sbjct: 184 RFAVDNGMDISFIEEMPLGEISSHKRVNTQ 213 >gi|291546331|emb|CBL19439.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus sp. SR1/5] Length = 462 Score = 42.4 bits (98), Expect = 0.11, Method: Compositional matrix adjust. Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 38/150 (25%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C C FCF +M + T L KD ++ L+++Q G+ + L++ + Sbjct: 92 CSNKCMFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYVTLTNMSEKD 138 Query: 165 VLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223 + + +RY H++ PI + Q +NPEL +C +H F+ +A Sbjct: 139 IERVIRY--HLE--------PINISFQAMNPEL-RCK---------MLHNR----FAGKA 174 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEI 253 + + L NAGI + Q VL KG+ND E+ Sbjct: 175 LDKVDMLYNAGITMNGQIVLCKGVNDGDEL 204 >gi|213418029|ref|ZP_03351106.1| KamA family protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 67 Score = 42.0 bits (97), Expect = 0.14, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 1/49 (2%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL 99 NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL Sbjct: 17 NPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALL 64 >gi|88800258|ref|ZP_01115825.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297] gi|88776973|gb|EAR08181.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297] Length = 322 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 44/179 (24%), Positives = 79/179 (44%), Gaps = 21/179 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYIQEKSQIWEVIFTGGDPLIL 157 L + VC C +C G LS+ + EAA+ + Q +Q ++ TGG+P + Sbjct: 15 LSVTDVCNFRCSYCLPDGYQGKPDEAFLSASELEAAVRGFAQMGTQ--KIRLTGGEPGLR 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 S L +++ L I + + + + P+ IQ +AG + ++I + Sbjct: 73 SD--LPEIIYRLNRIDGI------NNIAVTTNGYKLPQRIQHWADAGLNHLNVSIDSLDS 124 Query: 217 YEFSE--------EAIAAISRLANAGIILLSQSVLLKGINDD-PEILANLMRTFVELRI 266 F E E + +++ G+ + +VL+KG+NDD +L L +T V LR Sbjct: 125 STFHEITGHDRLAEVLEGLAKARELGLTVKVNAVLMKGVNDDLAAVLTWLKQTPVTLRF 183 >gi|295110182|emb|CBL24135.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus obeum A2-162] Length = 460 Score = 42.0 bits (97), Expect = 0.15, Method: Compositional matrix adjust. Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 38/154 (24%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C +C FCF +M + T L KD ++ L+++Q G+ + L++ + Sbjct: 90 CSNHCMFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYVTLTNMSQED 136 Query: 165 VLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223 + + ++Y H+ PI V Q +NP+L +C +H F+ +A Sbjct: 137 IERVIKY--HLS--------PINVSFQAMNPKL-RCK---------MLHNR----FAGDA 172 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 + + RL AGI + Q VL KG+ND E+ +L Sbjct: 173 LKKVDRLYEAGITMNGQIVLCKGVNDGEELEYSL 206 >gi|251772224|gb|EES52794.1| conserved protein of unknown function [Leptospirillum ferrodiazotrophum] Length = 464 Score = 42.0 bits (97), Expect = 0.16, Method: Compositional matrix adjust. Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 12/78 (15%) Query: 195 ELIQCLKEAGKPVYIAIHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKG 246 + ++ L++ P+YI++HA P + +++ + + RL N GI L +Q VL+ G Sbjct: 148 DYLRILEQRLSPLYISVHATEPALRRQILKNDRAQDVLPLLERLCNGGITLHTQVVLMPG 207 Query: 247 INDDPEILANLMRTFVEL 264 IND L+RT+ +L Sbjct: 208 INDG----EALLRTWKDL 221 >gi|125625194|ref|YP_001033677.1| hypothetical protein llmg_2436 [Lactococcus lactis subsp. cremoris MG1363] gi|124494002|emb|CAL99000.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris MG1363] Length = 275 Score = 41.6 bits (96), Expect = 0.17, Method: Compositional matrix adjust. Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 15/113 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ + L + C C +CF +EM T SK+ +AY EK ++ V GGD Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEM--KMLNTKEISKEDLEKIAYYLEKYKVPLVAICGGD 67 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV--DPQRINPELIQCLKEAG 204 P++ H L I VQ+L H PI+ + I+ E + LK AG Sbjct: 68 PIL--HPSL---------INFVQLLSEHKNYPIIATNAVDISYEYLYQLKSAG 109 >gi|154503634|ref|ZP_02040694.1| hypothetical protein RUMGNA_01458 [Ruminococcus gnavus ATCC 29149] gi|260589858|ref|ZP_05855771.1| putative radical SAM domain protein [Blautia hansenii DSM 20583] gi|153795734|gb|EDN78154.1| hypothetical protein RUMGNA_01458 [Ruminococcus gnavus ATCC 29149] gi|260539665|gb|EEX20234.1| putative radical SAM domain protein [Blautia hansenii DSM 20583] Length = 463 Score = 41.6 bits (96), Expect = 0.21, Method: Compositional matrix adjust. Identities = 22/82 (26%), Positives = 44/82 (53%), Gaps = 5/82 (6%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTV---LSSKDTEAALAYIQEKSQIWEVIFT 150 PD ++L L C + C++C+ + S G + + K + + EK Q + +IF Sbjct: 103 PDTVILMLCQECNLRCKYCYAGDGEYSNPGIMKYEIGKKAIDFIAEFCGEKEQ-FNIIFF 161 Query: 151 GGDPLILSHKRLQKVLKTLRYI 172 GG+PL + ++L+K+++ Y+ Sbjct: 162 GGEPL-MDFRKLKKLVEYAEYV 182 >gi|302388629|ref|YP_003824450.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646] gi|302199257|gb|ADL06827.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646] Length = 203 Score = 41.2 bits (95), Expect = 0.22, Method: Compositional matrix adjust. Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 9/86 (10%) Query: 93 YP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVI 148 YP D + L + + CP C FC R+ G + + K+ T+ + I + S EV+ Sbjct: 6 YPIGDSLYLNITNRCPNRCSFCIRQLGDGIEGYNLWLDKEPTTKEIIEAIGDPSGYREVV 65 Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIK 173 F G G+PL+ RLQ VL RY+K Sbjct: 66 FCGYGEPLM----RLQVVLDVARYLK 87 >gi|307946521|ref|ZP_07661856.1| putative radical SAM domain protein [Roseibium sp. TrichSKD4] gi|307770185|gb|EFO29411.1| putative radical SAM domain protein [Roseibium sp. TrichSKD4] Length = 472 Score = 41.2 bits (95), Expect = 0.23, Method: Compositional matrix adjust. Identities = 27/124 (21%), Positives = 59/124 (47%), Gaps = 7/124 (5%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL--AYIQEKSQIWEVIFTGG 152 + ++L + +C + C +C+ ++ + G ++S + AL AY + + + F GG Sbjct: 78 EDLVLNISQICNLACSYCYADDL--NSAGKIMSKSVCQEALDRAYQMSDTGLKSLKFLGG 135 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 +P L+ + ++ ++ I + R S V + + +IN E+ Q A K Y+ + Sbjct: 136 EP-TLAFEEIKYAVEYAETICAAEGYRLPSFVIVTNGTKINAEMAQFF--ASKNFYVLVS 192 Query: 213 ANHP 216 + P Sbjct: 193 MDGP 196 >gi|303239826|ref|ZP_07326349.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Acetivibrio cellulolyticus CD2] gi|302592536|gb|EFL62261.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Acetivibrio cellulolyticus CD2] Length = 227 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 26/168 (15%) Query: 93 YPDRILLKLLH-VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 YP ++ L C + C +C R +V +G + D + L++++++ E V+ + Sbjct: 14 YPGKMCAVLFTPGCNMDCFYCHNRALV---EGGHENITDADEVLSFLEKRKGFLEGVVVS 70 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P LQK L L ++K V+ L + ++ D NP++++ + G YIA Sbjct: 71 GGEPT------LQKGL--LPFLKDVKRLGYSIKL---DTNGTNPDVVENVLHKGLIDYIA 119 Query: 211 IHANHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGIN 248 + PYE E + ++ L N+GI ++ L G++ Sbjct: 120 MDFKAPYEKYNEICRTEVDIGNVMRSVDLLINSGIDYEFRTTLAPGLD 167 >gi|283797873|ref|ZP_06347026.1| PDZ domain protein [Clostridium sp. M62/1] gi|291074564|gb|EFE11928.1| PDZ domain protein [Clostridium sp. M62/1] Length = 465 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 47/187 (25%), Positives = 77/187 (41%), Gaps = 39/187 (20%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T L KD ++ L+++Q G+ + L Sbjct: 82 LMSEYRSCHNKCIFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYITL 128 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 ++ + + + I+RFH + Q +NP+L +C + Sbjct: 129 TNMKDKDFER---------IIRFHLAPINISVQTMNPKL-RCRMLNNR------------ 166 Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277 F+ EA+ I RL AGI + Q VL KG+ND E+ ++ R PY + Sbjct: 167 -FAGEALKKIDRLYEAGIPMNGQIVLCKGVNDGRELDFSIREL---TRYIPYMQSVSVVP 222 Query: 278 AGTSHFR 284 G S +R Sbjct: 223 VGLSRYR 229 >gi|229816073|ref|ZP_04446394.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM 13280] gi|229808387|gb|EEP44168.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM 13280] Length = 441 Score = 41.2 bits (95), Expect = 0.25, Method: Compositional matrix adjust. Identities = 32/143 (22%), Positives = 64/143 (44%), Gaps = 14/143 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFTGGD 153 I L + HVC + C +CF + + ++ K AA+ Y+ K+ + ++F GG+ Sbjct: 90 IELHVAHVCNLGCDYCFAGKGNYGTQSLLMKEKVAYAAVDYLVHNSSKNDVLTIVFFGGE 149 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 P++ ++ L + KT+ Y + R + + +N I+ KE G + +++ Sbjct: 150 PML--NEPL--IWKTVDYAESAHPKRRFTYSITTNGTLLNDRAIEAFKEHGFSILVSLDG 205 Query: 214 -------NHPYEFSEEAIAAISR 229 + PY+ + A I R Sbjct: 206 VGCKHDESRPYKNGRGSFADIER 228 >gi|52549689|gb|AAU83538.1| coenzyme PQQ synthesis protein [uncultured archaeon GZfos30H9] Length = 317 Score = 41.2 bits (95), Expect = 0.26, Method: Compositional matrix adjust. Identities = 54/208 (25%), Positives = 92/208 (44%), Gaps = 24/208 (11%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQI-WEVIFTGGDPLIL 157 +L C +CR CFR G GT+LS ++T A A ++ + + + TGG+P L Sbjct: 21 MLTGCDFHCRGCFRPARDGG--GTLLSPEETLKRAEQACLKHYGTLPTKAMITGGEP-TL 77 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------KPVYI 209 + L ++K L +I+ + I + N LK+AG K Sbjct: 78 DKEFLLTLVKGLEEKGFKEIILMSNGYEI--GREGNDNYAAELKDAGLTEAHIDIKAFSD 135 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE-----ILANLMRTFVEL 264 IH + + ++ + A+ L + G+ LL Q+V + GI D E I + + + ++ Sbjct: 136 EIHIWYTGKSNKPVLNAVRMLNDTGMELLIQTVYMPGIVDVEEIEQIAIFLSDVNSNIKF 195 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 RI P+ P A R TIE+ ++ Sbjct: 196 RINPF---APSFAFERVTERPTIEDMER 220 >gi|317471603|ref|ZP_07930947.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp. 3_2_56FAA] gi|316900918|gb|EFV22888.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp. 3_2_56FAA] Length = 324 Score = 41.2 bits (95), Expect = 0.27, Method: Compositional matrix adjust. Identities = 57/254 (22%), Positives = 110/254 (43%), Gaps = 35/254 (13%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 +K I R D + + + C + CR+C ++ + +LS E L+ + + + Sbjct: 1 MKDIYGRTIDYMRISVTDRCNLRCRYCMPEDIPSVEHTDILS---YEELLSICESAADLG 57 Query: 146 EVIF--TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 F TGG+PL+ K ++ L+ + V+ + S +++P ++ LKEA Sbjct: 58 ICKFKITGGEPLV--RKGCAGFIERLKQLPGVRQVTLTSNGLLLEP------YLERLKEA 109 Query: 204 G-KPVYIAIHANHPYEFSE--------EAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 G + I++ ++ E ++A+ A G+ V++KGINDD EIL Sbjct: 110 GIDGINISLDTLDEKKYKEITGKTGVQTVLSAVRNSARMGLNTKVNCVVMKGINDD-EIL 168 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ-------- 306 +L+ E + ++ + GT + +E I++ L++ G+ + Sbjct: 169 -DLLEIGREDHVDIRFIEMMPIGFGTQFTGMNSDE---IISLLRQTYPGIKKEEQIRGNG 224 Query: 307 PFYILDLPGGYGKV 320 P L +PG G V Sbjct: 225 PARYLKIPGFSGAV 238 >gi|312623314|ref|YP_004024927.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203781|gb|ADQ47108.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor kronotskyensis 2002] Length = 231 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 29/191 (15%) Query: 93 YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 YP +I C C FC+ E+V + KG + D Y+ ++ I + V T Sbjct: 13 YPKKIAATCFFGGCNFSCPFCYNSELV-NFKGKFM---DDSIFFEYLDKRKGIVDAVCIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P L+ + L + +K IK +L +D PE++Q L +AG Y+A Sbjct: 69 GGEP-TLNEEYLTEFIKK---IKQKNLL------VKLDTNGSKPEVLQRLLDAGLLDYVA 118 Query: 211 IHANHPYE-------FS--EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 + P E FS ++ I +I L N+ I ++ + K ++ +IL N+ R Sbjct: 119 MDVKAPLEKYPQITGFSDVDKIIRSIEILKNSNIDYEFRTTVNKNLHTVEDIL-NIARLL 177 Query: 262 VELR---IKPY 269 + R IKPY Sbjct: 178 KDSRLYIIKPY 188 >gi|153812951|ref|ZP_01965619.1| hypothetical protein RUMOBE_03358 [Ruminococcus obeum ATCC 29174] gi|149830898|gb|EDM85988.1| hypothetical protein RUMOBE_03358 [Ruminococcus obeum ATCC 29174] Length = 468 Score = 40.8 bits (94), Expect = 0.34, Method: Compositional matrix adjust. Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 38/156 (24%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C +C FCF +M + T L KD ++ L+++Q G+ + L++ + Sbjct: 98 CSNHCMFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYVTLTNMSQED 144 Query: 165 VLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223 + + ++Y H+ PI V Q +NP+L +C +H F+ +A Sbjct: 145 IERVIKY--HLS--------PINVSFQAMNPQL-RCK---------MLHNR----FAGDA 180 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 + + +L AGI + Q VL KG+ND E+ +L + Sbjct: 181 LKKVDQLYEAGITMNGQIVLCKGVNDGEELEYSLQK 216 >gi|70607223|ref|YP_256093.1| molybdenum cofactor biosynthesis protein A [Sulfolobus acidocaldarius DSM 639] gi|76363232|sp|Q4J8T0|MOAA_SULAC RecName: Full=Probable molybdenum cofactor biosynthesis protein A gi|68567871|gb|AAY80800.1| molybdenum cofactor biosynthesis protein A [Sulfolobus acidocaldarius DSM 639] Length = 313 Score = 40.4 bits (93), Expect = 0.36, Method: Compositional matrix adjust. Identities = 40/137 (29%), Positives = 60/137 (43%), Gaps = 13/137 (9%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 +K + R + + + L H C C FC M G G L S D + +A I + I Sbjct: 1 MKDVYGRELEDLRITLTHACNFTCFFC---HMEGENDGDSLLSADQISLVAQIGMEFGIR 57 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204 V TGG+P + + L +++ L K V I V + + EL LK+AG Sbjct: 58 TVKLTGGEPTL--RRDLPEIISKL---KEVGI----KEVSMTTNGYLLKELAGKLKDAGL 108 Query: 205 KPVYIAIHANHPYEFSE 221 V I++H+ P F E Sbjct: 109 DRVNISLHSIDPVIFKE 125 >gi|304310967|ref|YP_003810565.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium HdN1] gi|301796700|emb|CBL44912.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium HdN1] Length = 332 Score = 40.4 bits (93), Expect = 0.39, Method: Compositional matrix adjust. Identities = 51/215 (23%), Positives = 93/215 (43%), Gaps = 23/215 (10%) Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 N+ +PL R + L + C C +C +M + VLS ++ + +A + Sbjct: 2 NSSTPLIDAFGRKVTYLRLSVTDRCDFRCVYCMSEQMQFLPRSQVLSLEEMQ-TIAAVFV 60 Query: 141 KSQIWEVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + ++ TGG+PL+ L + L L +K + + +++ +L + Sbjct: 61 GLGVTKIRLTGGEPLVRKDCVSLVRGLSELEGLKEITLTTNGNQL---------AQLAKP 111 Query: 200 LKEAG-KPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLS-QSVLLKGIND 249 LKEAG + I++ + +P +F + +A I +AG +V++KG ND Sbjct: 112 LKEAGLGRINISLDSLNPEKFHAITRTGQLSQVLAGIDAAVDAGFDGTKLNAVIMKGRND 171 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284 D EI+A L V + Y+ L G +H R Sbjct: 172 D-EIIA-LAEYAVSKGVDITYIEEMPLGEGINHDR 204 >gi|315649901|ref|ZP_07902983.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex V453] gi|315274700|gb|EFU38082.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex V453] Length = 334 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 28/181 (15%) Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 PLK R D I + + C + C +C E + Q + S + AA+ + + Sbjct: 4 PLKDSFGRVHDYIRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAILRVLAPMGV 63 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 +V TGG+PL+ K L+ +++ + I+ +Q + + ++ P + LKEAG Sbjct: 64 SKVRLTGGEPLV--RKDLENLVRMIASIEGIQDISLTTNGIML------PSKARLLKEAG 115 Query: 205 -KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS--------------QSVLLKGIND 249 + I++ + H EE A I+R + +L VL+KG N+ Sbjct: 116 LTRINISLDSLH-----EERYARITRGGHVSKVLEGIEAAYEAGLDPIKLNMVLMKGFNE 170 Query: 250 D 250 D Sbjct: 171 D 171 >gi|15674140|ref|NP_268315.1| hypothetical protein L16911 [Lactococcus lactis subsp. lactis Il1403] gi|12725218|gb|AAK06256.1|AE006444_7 unknown protein [Lactococcus lactis subsp. lactis Il1403] Length = 275 Score = 40.4 bits (93), Expect = 0.40, Method: Compositional matrix adjust. Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 15/113 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ + L + C C +CF +EM T SK+ +AY EK ++ V GGD Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEM--KMLNTKEISKEDLEKIAYYLEKYKVPLVAICGGD 67 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--ELIQCLKEAG 204 P++ H +L I VQ+L H P + ++ E + LK AG Sbjct: 68 PIL--HPKL---------IDFVQLLSEHKNYPTIATNAVDVSYEYLYQLKSAG 109 >gi|254172055|ref|ZP_04878731.1| radical SAM domain protein [Thermococcus sp. AM4] gi|214033951|gb|EEB74777.1| radical SAM domain protein [Thermococcus sp. AM4] Length = 419 Score = 40.4 bits (93), Expect = 0.42, Method: Compositional matrix adjust. Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 33/184 (17%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144 G++ R + I ++ + C + C FC E S+ + D + + + E ++I Sbjct: 108 GLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167 Query: 145 -WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQ 198 E G G+PLI + ++ VQ LR H V ++ Q + +L++ Sbjct: 168 GLEAHLDGQGEPLIYPFR-----------VELVQALREHPNVSVISMQSNGTLLTDKLVE 216 Query: 199 CLKEAG-KPVYIAIHANHP-----------YEFSEEAIAAISRLANAGIILLSQSVLLKG 246 L EAG V ++IH+ P Y+ E + L NAGI +L V++ G Sbjct: 217 ELAEAGLDRVNLSIHSLDPEKAKMLMGMKSYDL-EHVLEMAEALVNAGIDVLIAPVIIFG 275 Query: 247 INDD 250 INDD Sbjct: 276 INDD 279 >gi|117928855|ref|YP_873406.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B] gi|166217236|sp|A0LVG0|MOAA_ACIC1 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|117649318|gb|ABK53420.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B] Length = 362 Score = 40.4 bits (93), Expect = 0.45, Method: Compositional matrix adjust. Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 36/201 (17%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKD- 130 PI D+ PL+ + DR C + CR+C RE+ G + +L+ ++ Sbjct: 4 PIRDSLGRPLRDLRISVTDR--------CNMRCRYCMPREIFGPNFTFLPRSELLTFEEI 55 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 T A A+I ++ + ++ TGG+PL+ + L +++ L + V L + ++ Sbjct: 56 TRIAAAFI--RAGVRKIRLTGGEPLLRAD--LPRLVAMLADLPDVHDLALTTNGSLL--- 108 Query: 191 RINPELIQCLKEAG-KPVYIAIHANHPYEFSEEA---------IAAISRLANAGIILLS- 239 + L++AG + V +++ +P FS A +A I +AG + Sbjct: 109 ---ARYARPLRDAGLRRVTVSLDTLNPATFSRLADTDIPLDNVLAGIDAAQSAGFFPIKL 165 Query: 240 QSVLLKGIND-DPEILANLMR 259 +V+ +G+ND D E LA R Sbjct: 166 NAVIRRGVNDGDVEELAAFAR 186 >gi|193212999|ref|YP_001998952.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum NCIB 8327] gi|193086476|gb|ACF11752.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum NCIB 8327] Length = 333 Score = 40.0 bits (92), Expect = 0.50, Method: Compositional matrix adjust. Identities = 58/276 (21%), Positives = 111/276 (40%), Gaps = 50/276 (18%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 P + N + L R D + + + C + C +C + E +K L + T A + Sbjct: 3 PDSEQNRAALTDRFGRTIDYVRIAVTSACNLRCTYCLKNEEDADRKIDQLDADQTVAVIE 62 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196 + + I +V FTGG+PL+ H + ++++ + + ++F + ++D R EL Sbjct: 63 VLAQMG-IRKVRFTGGEPLL--HPDIVELVRRAKATPGIDTVKFTTNGILLD--RYLDEL 117 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-----AIAAISRLANA-GIILLSQSVLLKGINDD 250 I + + A + + AA+ RL + + + +++L+GIN+D Sbjct: 118 IAAGLDGINLSLDTLDAQKYRDITRRDRFASVRAALDRLLDIPDMSVKINTLMLRGINND 177 Query: 251 --PEILANLMRT------FVELRIKPY---------------------YLHHPDLAAGTS 281 P+ + L R+ F+EL +P+ + H+P L A T Sbjct: 178 EIPDFV-ELTRSHKLNVRFMEL--QPFDDQQIWRTGKFMGAEMIREQLFQHYPQLEAVTG 234 Query: 282 H------FRLTIEEGQ-KIVASLKEKISGLCQPFYI 310 FRL+ +G I+ + G C I Sbjct: 235 RDTEHYSFRLSNYQGSIAIIPAFSRNFCGSCSRLRI 270 >gi|256423142|ref|YP_003123795.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis DSM 2588] gi|256038050|gb|ACU61594.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis DSM 2588] Length = 326 Score = 40.0 bits (92), Expect = 0.54, Method: Compositional matrix adjust. Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 27/173 (15%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 +R D + + L C + C +C E + L D A LA I + + ++ T Sbjct: 7 NRVHDYLRISLTDNCNLRCFYCMPEEDYDFTPASRLMQADEIATLAGIFTANGVRKIRLT 66 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP----ELIQCLKEAG-K 205 GG+PL+ K K++ +L SR+P+ N E L+EAG + Sbjct: 67 GGEPLV--RKDAAKIILSL------------SRLPVELTMTTNGARLHEFADVLEEAGIR 112 Query: 206 PVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDD 250 + I++ +F + + I L N GI + V++KG+ND+ Sbjct: 113 SLNISLDTLQADKFMLITRRDLFHQVKSNIDLLLNMGIRVKVNVVMMKGLNDN 165 >gi|307824586|ref|ZP_07654810.1| coenzyme PQQ biosynthesis protein E [Methylobacter tundripaludum SV96] gi|307734240|gb|EFO05093.1| coenzyme PQQ biosynthesis protein E [Methylobacter tundripaludum SV96] Length = 375 Score = 40.0 bits (92), Expect = 0.59, Method: Compositional matrix adjust. Identities = 55/236 (23%), Positives = 109/236 (46%), Gaps = 34/236 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P +L +L + CP+ C +C + + + L ++D + L ++ + ++ F+GG+ Sbjct: 12 PRWLLAELTYACPLQCPYC-SNPIDYATYQSELDTEDWKRVLTQARKMGAV-QLGFSGGE 69 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212 PL +K L L +KH + L ++S + I + E I LKEAG + ++I Sbjct: 70 PLT------RKDLPEL--VKHARDLGYYSNL-ITSGYGLTEEKIVQLKEAGLDHIQVSIQ 120 Query: 213 ANH-----------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA---NLM 258 A+ ++ +E + + + ++L + + I+ PEILA L Sbjct: 121 ASSQELNDHIAGTASFQHKKEVAHLVKK--HGYPMVLCVVIHRENIHQMPEILAMAEELG 178 Query: 259 RTFVELRIKPYYLH---HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 ++EL YY + DL T + E+ ++I + KEK++G + +Y++ Sbjct: 179 ADYLELANTQYYGWAHANRDLLLPT---KEQFEQAEQIAQAFKEKVAGKMKIYYVV 231 >gi|327311467|ref|YP_004338364.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus uzoniensis 768-20] gi|326947946|gb|AEA13052.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus uzoniensis 768-20] Length = 341 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 78/191 (40%), Gaps = 38/191 (19%) Query: 89 IVHRYPDRILLKLL----HVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 +V RY R LKL VC C FC F ++ G + L + D L + K Sbjct: 29 LVDRY-GRPFLKLRVAVNDVCNFSCIFCHFEGQLRGVGR---LLNADDYGFLVDVLSKVG 84 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI-----VDPQRINPELIQ 198 + + TGG+PL+ S V I+R +R + + R+ Sbjct: 85 VRDYKLTGGEPLLRSD--------------IVDIVRKMNRDGVEISMTTNGFRLAELAED 130 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEA----------IAAISRLANAGIILLSQSVLLKGIN 248 + V +++H P +FS+ A + + AG+ + +VLLKGIN Sbjct: 131 LAAAGLRRVNVSVHTTDPEKFSKVAGVPKEWFRRVLDGVHAAVKAGMKVKLNAVLLKGIN 190 Query: 249 DDPEILANLMR 259 DD E L +L++ Sbjct: 191 DDRESLRSLVK 201 >gi|323141165|ref|ZP_08076066.1| 23S rRNA m2A2503 methyltransferase [Phascolarctobacterium sp. YIT 12067] gi|322414308|gb|EFY05126.1| 23S rRNA m2A2503 methyltransferase [Phascolarctobacterium sp. YIT 12067] Length = 351 Score = 39.7 bits (91), Expect = 0.74, Method: Compositional matrix adjust. Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 35/180 (19%) Query: 105 CPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEK-----SQIWEVIFTG-GDPLI 156 C ++C FC KG V L++ + A + E+ + + V+ G G+P++ Sbjct: 113 CDMHCAFC-----ASGLKGAVRNLTAAEIVAQVYLFNERLREQGAMVSRVVVMGSGEPML 167 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--HA- 213 VL+ L ++ R + I P I+ L+E G P+ +AI HA Sbjct: 168 ----NFDSVLQALDFLHREDTCNMSYRNMTISTCGIIPG-IKRLEEQGNPINLAISLHAV 222 Query: 214 -----------NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP---EILANLMR 259 N Y F + AA S +G + + +LLKG ND P E+L+N +R Sbjct: 223 KNELRTALMPVNKGYPFVDVLTAAESYSKASGRQITYEYILLKGKNDSPQDAELLSNYLR 282 >gi|39935047|ref|NP_947323.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas palustris CGA009] gi|123773347|sp|Q3V7S1|MOAA_RHOPA RecName: Full=Molybdenum cofactor biosynthesis protein A gi|39648898|emb|CAE27419.1| molybdenum biosynthetic protein A [Rhodopseudomonas palustris CGA009] Length = 344 Score = 39.7 bits (91), Expect = 0.75, Method: Compositional matrix adjust. Identities = 40/184 (21%), Positives = 78/184 (42%), Gaps = 17/184 (9%) Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 P+ R D + + + C C +C +M + +L+ ++ + + K + Sbjct: 15 PMTDPFGRTIDYLRVSITDRCDFRCVYCMAEDMTFLPRADLLTLEELDRLCSAFIAKG-V 73 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 ++ TGG+PL+ + + ++++L R++K + R EL C Sbjct: 74 RKLRLTGGEPLV--RRNMMSLVRSLSRHLKTGALDELTLTTNGSQLARFAAELADC---G 128 Query: 204 GKPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + V +++ P EF E +A I AG+ + SV+LKG N+D + Sbjct: 129 VRRVNVSLDTLDPDEFRRITRWGDLERVLAGIDAARTAGLAVKINSVVLKGSNEDE--IP 186 Query: 256 NLMR 259 +LMR Sbjct: 187 SLMR 190 >gi|95929999|ref|ZP_01312739.1| Radical SAM [Desulfuromonas acetoxidans DSM 684] gi|95133968|gb|EAT15627.1| Radical SAM [Desulfuromonas acetoxidans DSM 684] Length = 614 Score = 39.7 bits (91), Expect = 0.78, Method: Compositional matrix adjust. Identities = 46/175 (26%), Positives = 70/175 (40%), Gaps = 25/175 (14%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 I + + HN +P+ R P +++L + P D + P +G+ L ++ Sbjct: 127 IVDAADRHNALEPLYRNSGP----IDLL--HQVSPWLDGSLVPGEGV--------LWEVS 172 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 CP C FCF + S + E AL SQ+W + T P Sbjct: 173 RGCPFRCSFCFDARGDHGVRTMAFSRLEQELALFVKHRVSQVWVLDSTFNYP-------A 225 Query: 163 QKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 ++ K LR IK V L FH I + I+ EL Q L E V I + + +P Sbjct: 226 ERGKKLLRLIKRVAPHLHFHLEAKI---EFIDEELAQLLSEIHCSVQIGLQSANP 277 >gi|169335672|ref|ZP_02862865.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM 17244] gi|169258410|gb|EDS72376.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM 17244] Length = 454 Score = 39.3 bits (90), Expect = 0.86, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 19/135 (14%) Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-- 144 KGIV + L + H C + CR+CF + K V++ + + A+ +I S Sbjct: 87 KGIVKA----MCLHVSHDCNLACRYCFASGGNFNMKKEVMNIETAKKAIDFIISNSGNKV 142 Query: 145 -WEVIFTGGDPLILSHKRLQKVLKTLRYI-----KHVQILRFHSRVPIVDPQRINPELIQ 198 EV F GG+PL+ V KT+ Y KH +I RF V +N E+I Sbjct: 143 HLEVDFFGGEPLL----NFDVVKKTVEYAKEEAKKHNKIFRFTLTTNCV---LLNDEIID 195 Query: 199 CLKEAGKPVYIAIHA 213 L + V +++ Sbjct: 196 YLNKEMYNVVLSLDG 210 >gi|307149776|ref|YP_003890819.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822] gi|306986576|gb|ADN18454.1| Na-Ca exchanger/integrin-beta4 [Cyanothece sp. PCC 7822] Length = 5944 Score = 39.3 bits (90), Expect = 0.88, Method: Composition-based stats. Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 18/109 (16%) Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPD---LAAGTSHFRLTIEEGQKIVASLKEKISG 303 +NDD NL+ + V L + + ++ D L GT F L+IE G+ ++ + Sbjct: 1538 LNDD-----NLINSIVSLELDLFIINSWDGNHLGYGTDFFNLSIENGETLLNTTFSNTEE 1592 Query: 304 LCQPFY----ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 L Q + D P G G ++IDT N + G+ Y ++V+ +P Sbjct: 1593 LSQSYPDAWGTGDYPSGTGAIEIDTLNSSEDGSAVY------HLVYTFP 1635 >gi|239820673|ref|YP_002947858.1| Radical SAM domain protein [Variovorax paradoxus S110] gi|239805526|gb|ACS22592.1| Radical SAM domain protein [Variovorax paradoxus S110] Length = 351 Score = 39.3 bits (90), Expect = 0.89, Method: Compositional matrix adjust. Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 30/213 (14%) Query: 105 CPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRL 162 C V CRFC R+ + Q G S + A +A + + + +V+F G G+P +H L Sbjct: 106 CAVGCRFCMTGRDGLLRQVG----SAEIIAQVALARMRRPVRKVVFMGMGEP---AHN-L 157 Query: 163 QKVLKTLRYIKHVQILRFHSRV--PIVDPQ--------RINPELIQCLKEAGKPVYIAIH 212 V++ + + V + + V + DP+ R+ P L L + + Sbjct: 158 DNVMEAIELLGTVGNIGHKNLVFSTVGDPRAFERLQQARVRPALALSLHTTKAGLRKKLL 217 Query: 213 ANHPYEFSEEAIAAISRLANA-GIILLSQSVLLKGINDDPEILANLMR----TFVELRIK 267 P EE + A R A A G + Q LL G+ND PE + ++R F L + Sbjct: 218 PRAPNMTPEELVGAGERYARATGYPIQYQWTLLDGVNDGPEEIDGIVRLLSGKFGVLNMI 277 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 P+ + G + R ++E +++ +L ++ Sbjct: 278 PF-----NAVEGVAFSRPSLERCEQMARTLHQR 305 >gi|300714617|ref|YP_003739420.1| O2-independent coproporphyrinogen III oxidase [Erwinia billingiae Eb661] gi|299060453|emb|CAX57560.1| O2-independent coproporphyrinogen III oxidase [Erwinia billingiae Eb661] Length = 455 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 18/134 (13%) Query: 82 NHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 N + + RYPDR L +H+ C C FC ++V Q+ + D A + IQ Sbjct: 36 NEAAFQQAAQRYPDRPLSLYVHIPFCHRLCYFCGCNKLVTRQQHKADAYLDALA--SEIQ 93 Query: 140 EKSQIW------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQ 190 +++++ ++ + GG P L+ +++ +++ LR Q F + VDP+ Sbjct: 94 SRAKLFRGRTVSQMHWGGGTPTYLNKQQITRLITLLR-----QAFTFSEDAELSIEVDPR 148 Query: 191 RINPELIQCLKEAG 204 I +++ L AG Sbjct: 149 EIELDVLDHLHAAG 162 >gi|332799081|ref|YP_004460580.1| Radical SAM domain-containing protein [Tepidanaerobacter sp. Re1] gi|332696816|gb|AEE91273.1| Radical SAM domain protein [Tepidanaerobacter sp. Re1] Length = 454 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 28/113 (24%), Positives = 59/113 (52%), Gaps = 5/113 (4%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIF 149 Y + L + H C + C++CF + K ++S + + A+ ++ EKS + E+ F Sbjct: 95 YVKALCLNVAHDCNLRCKYCFASKGDYHGKRELMSIEVGKKAVDFLVEKSGDMKNLEIDF 154 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 GG+PL ++ +++V+ + I+ + +FH + + +N E++Q L E Sbjct: 155 FGGEPL-MAMNTIKEVISYAKSIEKLCHKKFHFTIT-TNALLLNDEVMQYLHE 205 >gi|320160979|ref|YP_004174203.1| oxygen-independent coproporphyrinogen-III oxidase [Anaerolinea thermophila UNI-1] gi|319994832|dbj|BAJ63603.1| oxygen-independent coproporphyrinogen-III oxidase [Anaerolinea thermophila UNI-1] Length = 405 Score = 39.3 bits (90), Expect = 0.90, Method: Compositional matrix adjust. Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 6/104 (5%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----QIWEVIFTGGDPLILSHK 160 C C +C G +K ++ +A + E + + + F GG P LS Sbjct: 25 CVHRCAYCDFNTYAGMEKWIPAYTEALCREIAVVSEAAPEGISVQTIFFGGGTPSYLSAS 84 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 L KVL T+R H Q++ +P + P L + L+EAG Sbjct: 85 LLNKVLHTVR--SHFQVMEKAEISLEANPGTVEPHLFEELREAG 126 >gi|238797624|ref|ZP_04641120.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia mollaretii ATCC 43969] gi|238718488|gb|EEQ10308.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia mollaretii ATCC 43969] Length = 459 Score = 39.3 bits (90), Expect = 0.91, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 12/133 (9%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKG------TVLSSKDT 131 D N S + V RYP R L +H+ C C FC ++V Q+ VL ++ Sbjct: 37 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLENEIR 96 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 + A + Q+ ++ + GG P L+ ++ ++ LR +H L + VDP+ Sbjct: 97 QRAALFA--GRQVSQMHWGGGTPTYLNKTQISHLMNLLR--EHFDFLPGAEQSIEVDPRE 152 Query: 192 INPELIQCLKEAG 204 I +++ L+ G Sbjct: 153 IELDVLDHLRAEG 165 >gi|300855333|ref|YP_003780317.1| putative SNF2 family helicase [Clostridium ljungdahlii DSM 13528] gi|300435448|gb|ADK15215.1| predicted SNF2 family helicase [Clostridium ljungdahlii DSM 13528] Length = 1080 Score = 39.3 bits (90), Expect = 0.95, Method: Composition-based stats. Identities = 51/182 (28%), Positives = 79/182 (43%), Gaps = 22/182 (12%) Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVD-PQRINPELIQCLKEAGKPVYIAIHANHPYE 218 K +V++ L + ILR + IV+ P +I L+ L + K VY +A+H + Sbjct: 806 KESPEVIEELNRLIAPFILRRKKKDVIVELPDKIEKTLMVTLDDKQKKVY-KTYADHAVD 864 Query: 219 FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN-------LMRTFVELRIKPYYL 271 E+ + N+ I +LS L+ + DP IL N M VEL Sbjct: 865 LIEKKVKE-DEFKNSKIEILSYITKLRQLCLDPSILINNYSGGNGKMDALVELL------ 917 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVG 331 H +A G H L + ++ ++ EKISG PF LD G K++ + +KK Sbjct: 918 -HKSIAQG--HRILVFSQFTSVLKNIGEKISGEKIPFSYLD---GTIKLEERINIVKKFN 971 Query: 332 NG 333 G Sbjct: 972 KG 973 >gi|183221187|ref|YP_001839183.1| hypothetical protein LEPBI_I1801 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911278|ref|YP_001962833.1| thiamine biosynthesis enzyme [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775954|gb|ABZ94255.1| Thiamine biosynthesis enzyme [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779609|gb|ABZ97907.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 367 Score = 39.3 bits (90), Expect = 0.98, Method: Compositional matrix adjust. Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 17/170 (10%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI------------L 98 NPNDP+ + E I P+E + + ++ + ++I + Sbjct: 9 NPNDPVDSVLLKATEGKRISPKEGLLLYKEGDFLKIQMVARFLREKIRPHSEASYTMFRV 68 Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C V C FC + +G+ KG VLS +D + Y E+ ++ GG L Sbjct: 69 VNYTNYCNVECSFCSFMDEIGNGKGYVLSKEDILQKMDYAMEEGAD-QMFLQGGVYPELP 127 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP----ELIQCLKEAG 204 V++T++ +R S V +++ + I E+++ LKEAG Sbjct: 128 FDYYLDVIRTVKAKYPKMHIRAFSPVEVINLETITGKPLREVLEILKEAG 177 >gi|240102758|ref|YP_002959067.1| Radical SAM protein, elongator protein 3/MiaB/NifB related [Thermococcus gammatolerans EJ3] gi|239910312|gb|ACS33203.1| Radical SAM protein, elongator protein 3/MiaB/NifB related [Thermococcus gammatolerans EJ3] Length = 419 Score = 39.3 bits (90), Expect = 0.99, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 33/184 (17%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144 G++ R + I ++ + C + C FC E S+ + D + + + E ++I Sbjct: 108 GLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167 Query: 145 -WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQ 198 E G G+PLI + ++ VQ LR H V ++ Q + +L++ Sbjct: 168 GLEAHLDGQGEPLIYPFR-----------VELVQALREHPNVSVISMQSNGTLLTDKLVE 216 Query: 199 CLKEAG-KPVYIAIHANHP-----------YEFSEEAIAAISRLANAGIILLSQSVLLKG 246 L EAG V ++IH+ P Y+ + + L NAGI +L V++ G Sbjct: 217 ELAEAGLDRVNLSIHSLDPEKAKMLMGMKSYDL-DHVLEMAEALVNAGIDVLIAPVIIFG 275 Query: 247 INDD 250 INDD Sbjct: 276 INDD 279 >gi|210622341|ref|ZP_03293110.1| hypothetical protein CLOHIR_01058 [Clostridium hiranonis DSM 13275] gi|210154329|gb|EEA85335.1| hypothetical protein CLOHIR_01058 [Clostridium hiranonis DSM 13275] Length = 442 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 53/231 (22%), Positives = 89/231 (38%), Gaps = 68/231 (29%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C C FCF ++ + T L KD ++ L+++Q G+ + L++ Q Sbjct: 94 CRNKCMFCFIDQLPKGMRET-LYFKDDDSRLSFLQ------------GNFVTLTNMSEQD 140 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY------- 217 + +RY RI+P + I++H +P Sbjct: 141 IEDIIRY-------------------RISP------------INISVHTTNPELRQRMIT 169 Query: 218 -EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRIKP-- 268 F+ + + RLA AGI + Q VL G+ND E+ L+NL + I P Sbjct: 170 NRFAGRLYSIMERLAEAGITMNCQIVLCPGVNDGKELERTITDLSNLYPNVNSVAIVPVG 229 Query: 269 ---YYLHHPDLA---AGTSHFRLTIEEG--QKIVASLKEKISGLCQPFYIL 311 Y H P L T++ L + EG +K + + + + FYI+ Sbjct: 230 VTRYRDHLPHLEIFNEKTANEALDLVEGLQEKCLEKFGSRFAFMSDEFYII 280 >gi|197302998|ref|ZP_03168046.1| hypothetical protein RUMLAC_01724 [Ruminococcus lactaris ATCC 29176] gi|197297853|gb|EDY32405.1| hypothetical protein RUMLAC_01724 [Ruminococcus lactaris ATCC 29176] Length = 456 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 47/206 (22%) Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLK-----GIVHRYPDRILLKLLHVCPVY 108 D QF + EEL +L E+ P G+ ++ G+ + + L+ H C Sbjct: 38 DIFDYQFYVEAEELVVLVEK---PDGEQWEMEIEKEADEGLGIEFEEG-LMDEYHSCHNK 93 Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 C FCF +M + T L KD ++ L+++Q G+ + L++ + V + Sbjct: 94 CIFCFIDQMPPGMRET-LYFKDDDSRLSFLQ------------GNYITLTNMSDKDVERI 140 Query: 169 LRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227 +RY R PI + Q NPEL +C +H F+ EA+ + Sbjct: 141 VRY-------RLE---PINISFQTTNPEL-RCK---------MLHNR----FAGEALKKV 176 Query: 228 SRLANAGIILLSQSVLLKGINDDPEI 253 L GI + Q VL KG+ND E+ Sbjct: 177 DILYQGGIEMNGQIVLCKGVNDGEEL 202 >gi|21960794|gb|AAM87352.1|AE013983_5 O2-independent coproporphyrinogen III oxidase [Yersinia pestis KIM 10] gi|45434742|gb|AAS60303.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Microtus str. 91001] Length = 459 Score = 39.3 bits (90), Expect = 1.0, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGT-----VLSSKDTE 132 D N S + V RYP R L +H+ C C FC ++V Q+ V+ K+ Sbjct: 37 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIR 96 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 A + Q+ ++ + GG P L+ ++ ++ LR +H L + VDP+ I Sbjct: 97 QRAALFTGR-QVSQMHWGGGTPTYLNKTQISHLMTVLR--EHFDFLPDAEQSIEVDPREI 153 Query: 193 NPELIQCLKEAG 204 +++ L+ G Sbjct: 154 ELDVLDHLRAEG 165 >gi|194334917|ref|YP_002016777.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris aestuarii DSM 271] gi|194312735|gb|ACF47130.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris aestuarii DSM 271] Length = 336 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 6/99 (6%) Query: 84 SPLKGIVHRYP---DRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQ 139 SPLK + RY D + L + C + C +C R E V + +G LS + + LA + Sbjct: 10 SPLKPLSDRYRRTVDYVRLAVTSQCNLRCMYCMREEHTVYNPEGEALSGDEIVSMLAVLA 69 Query: 140 EKSQIWEVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQI 177 + + +V +TGG+PL+ RL + K L I+ V + Sbjct: 70 -RMGVSKVRYTGGEPLLRQDIVRLVRDAKALEGIETVSL 107 >gi|51594379|ref|YP_068570.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP 32953] gi|108809512|ref|YP_653428.1| coproporphyrinogen III oxidase [Yersinia pestis Antiqua] gi|108810414|ref|YP_646181.1| coproporphyrinogen III oxidase [Yersinia pestis Nepal516] gi|145601123|ref|YP_001165199.1| coproporphyrinogen III oxidase [Yersinia pestis Pestoides F] gi|150260915|ref|ZP_01917643.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis CA88-4125] gi|153950356|ref|YP_001399025.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP 31758] gi|161484735|ref|NP_671101.2| coproporphyrinogen III oxidase [Yersinia pestis KIM 10] gi|161511483|ref|NP_991426.2| coproporphyrinogen III oxidase [Yersinia pestis biovar Microtus str. 91001] gi|162421654|ref|YP_001604667.1| coproporphyrinogen III oxidase [Yersinia pestis Angola] gi|165926183|ref|ZP_02222015.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Orientalis str. F1991016] gi|165940226|ref|ZP_02228756.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Orientalis str. IP275] gi|166011477|ref|ZP_02232375.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Antiqua str. E1979001] gi|166213708|ref|ZP_02239743.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Antiqua str. B42003004] gi|167402108|ref|ZP_02307585.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167418791|ref|ZP_02310544.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167427043|ref|ZP_02318796.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167470513|ref|ZP_02335217.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis FV-1] gi|170026399|ref|YP_001722904.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis YPIII] gi|186893366|ref|YP_001870478.1| coproporphyrinogen III oxidase [Yersinia pseudotuberculosis PB1/+] gi|218927242|ref|YP_002345117.1| coproporphyrinogen III oxidase [Yersinia pestis CO92] gi|229836130|ref|ZP_04456298.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent [Yersinia pestis Pestoides A] gi|229841951|ref|ZP_04462106.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent [Yersinia pestis biovar Orientalis str. India 195] gi|229900596|ref|ZP_04515720.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent [Yersinia pestis Nepal516] gi|294502130|ref|YP_003566192.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003] gi|51587661|emb|CAH19261.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP 32953] gi|108774062|gb|ABG16581.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis Nepal516] gi|108781425|gb|ABG15483.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis Antiqua] gi|115345853|emb|CAL18711.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis CO92] gi|145212819|gb|ABP42226.1| coproporphyrinogen III oxidase, anaerobic [Yersinia pestis Pestoides F] gi|149290323|gb|EDM40400.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis CA88-4125] gi|152961851|gb|ABS49312.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pseudotuberculosis IP 31758] gi|162354469|gb|ABX88417.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis Angola] gi|165911858|gb|EDR30505.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Orientalis str. IP275] gi|165922043|gb|EDR39220.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Orientalis str. F1991016] gi|165989623|gb|EDR41924.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Antiqua str. E1979001] gi|166205110|gb|EDR49590.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Antiqua str. B42003004] gi|166962785|gb|EDR58806.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167048483|gb|EDR59891.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167053970|gb|EDR63801.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752933|gb|ACA70451.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pseudotuberculosis YPIII] gi|186696392|gb|ACC87021.1| oxygen-independent coproporphyrinogen III oxidase [Yersinia pseudotuberculosis PB1/+] gi|229681935|gb|EEO78027.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent [Yersinia pestis Nepal516] gi|229690261|gb|EEO82315.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent [Yersinia pestis biovar Orientalis str. India 195] gi|229706578|gb|EEO92584.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent [Yersinia pestis Pestoides A] gi|262360208|gb|ACY56929.1| coproporphyrinogen III oxidase [Yersinia pestis D106004] gi|262364155|gb|ACY60712.1| coproporphyrinogen III oxidase [Yersinia pestis D182038] gi|294352589|gb|ADE62930.1| coproporphyrinogen III oxidase [Yersinia pestis Z176003] Length = 457 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 10/132 (7%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGT-----VLSSKDTE 132 D N S + V RYP R L +H+ C C FC ++V Q+ V+ K+ Sbjct: 35 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIR 94 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 A + Q+ ++ + GG P L+ ++ ++ LR +H L + VDP+ I Sbjct: 95 QRAALFTGR-QVSQMHWGGGTPTYLNKTQISHLMTVLR--EHFDFLPDAEQSIEVDPREI 151 Query: 193 NPELIQCLKEAG 204 +++ L+ G Sbjct: 152 ELDVLDHLRAEG 163 >gi|57641163|ref|YP_183641.1| molybdenum cofactor biosynthesis protein A [Thermococcus kodakarensis KOD1] gi|57159487|dbj|BAD85417.1| probable molybdenum cofactor biosynthesis protein A [Thermococcus kodakarensis KOD1] Length = 419 Score = 38.9 bits (89), Expect = 1.1, Method: Compositional matrix adjust. Identities = 46/184 (25%), Positives = 81/184 (44%), Gaps = 33/184 (17%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144 G++ R + I ++ + C + C FC E S+ + D + + + E ++I Sbjct: 108 GLIDRGTNLIQVRGVSGCNLSCVFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167 Query: 145 -WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQ 198 E G G+PLI + ++ VQ LR H V ++ Q +N +L++ Sbjct: 168 GLEAHLDGQGEPLIYPFR-----------VELVQALREHPNVSVISMQSNGTLLNDKLVE 216 Query: 199 CLKEAG-KPVYIAIHANHP-----------YEFSEEAIAAISRLANAGIILLSQSVLLKG 246 L EAG V ++IH+ P Y+ + + L NAGI +L V++ G Sbjct: 217 ELAEAGLDRVNLSIHSLDPDKAKMLMGRKDYDL-QHVLDMAEALVNAGIDVLIAPVIIFG 275 Query: 247 INDD 250 +ND+ Sbjct: 276 VNDN 279 >gi|182419316|ref|ZP_02950569.1| heme biosynthesis [Clostridium butyricum 5521] gi|237667748|ref|ZP_04527732.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376956|gb|EDT74527.1| heme biosynthesis [Clostridium butyricum 5521] gi|237656096|gb|EEP53652.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 453 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 4/81 (4%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIF 149 Y I L ++H C + C++CF E G V+S + + A+ Y+ ++S + E+ Sbjct: 93 YIKAICLNVIHGCNLRCKYCFADEGEYHGHGGVMSVETAKKAIDYVIKRSGPRKNIEIDL 152 Query: 150 TGGDPLILSHKRLQKVLKTLR 170 GG+P ++ K +++++K R Sbjct: 153 FGGEPTLIMDK-IKEIIKYAR 172 >gi|311281670|ref|YP_003943901.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter cloacae SCF1] gi|308750865|gb|ADO50617.1| oxygen-independent coproporphyrinogen III oxidase [Enterobacter cloacae SCF1] Length = 457 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 18/136 (13%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDT------ 131 D + + V RYP+R L +H+ C C FC ++V Q+ D Sbjct: 35 DFGDAAFQLAVSRYPERSLSLYVHIPFCHKLCYFCGCNKIVTRQQHKADRYLDVLEQEIL 94 Query: 132 -EAALAYIQEKSQI-WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI-VD 188 A L + SQ+ W GG P L+ ++ ++++ LR H R + + I VD Sbjct: 95 HRAPLFNGRHVSQLHW----GGGTPTYLNKAQISRLMRLLRENFH---FRDDAEISIEVD 147 Query: 189 PQRINPELIQCLKEAG 204 P+ I +++ CL++ G Sbjct: 148 PREIELDVLDCLRQEG 163 >gi|114567979|ref|YP_755133.1| radical SAM protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114338914|gb|ABI69762.1| radical SAM domain protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 458 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 20/64 (31%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIFTGGD 153 + L + H C + C +CF + + ++S + +AAL ++ E+S Q EV F GG+ Sbjct: 104 LCLNMAHSCNMKCSYCFASQGNFGLRPALMSLETAKAALDFLLEQSGERQNLEVDFFGGE 163 Query: 154 PLIL 157 PL++ Sbjct: 164 PLLV 167 >gi|229591974|ref|YP_002874093.1| coproporphyrinogen III oxidase [Pseudomonas fluorescens SBW25] gi|229363840|emb|CAY51294.1| oxygen-independent coproporphyrinogen III oxidase [Pseudomonas fluorescens SBW25] Length = 460 Score = 38.9 bits (89), Expect = 1.3, Method: Compositional matrix adjust. Identities = 50/218 (22%), Positives = 88/218 (40%), Gaps = 32/218 (14%) Query: 45 NLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 +L P + P A QF Q ++L RE PL VH + Sbjct: 16 DLAGPRYTSYPTAVQFGSQVGTFDLLHALRE---SRKAARPLSLYVH----------VPF 62 Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 C C +C +++ +G L ++ + ++ K + ++ F GG P LSH Sbjct: 63 CANICYYCACNKVITKDRGRALPYLQRLEQEIQLVACHLDPKQPVEQLHFGGGTPTFLSH 122 Query: 160 KRLQKVLKTLRYIKHVQILRFHS--RVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 L++V+ LR +H +L S +DP+ + + L+E G V I + P Sbjct: 123 DELRQVMNCLR--QHFNLLDDDSGDYGIEIDPREADWATMGLLRELGFNRVSIGLQDLDP 180 Query: 217 YEFSEEAIAAISRLAN----AGIILLSQSVLLKGINDD 250 E A++RL + +I ++++ + IN D Sbjct: 181 -----EVQRAVNRLQSLEETRAVIDAARTLQFRSINVD 213 >gi|312792558|ref|YP_004025481.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312877157|ref|ZP_07737127.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor lactoaceticus 6A] gi|311796057|gb|EFR12416.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor lactoaceticus 6A] gi|312179698|gb|ADQ39868.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 231 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 29/191 (15%) Query: 93 YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 YP +I C C FC+ ++V + KG+ + D Y+ ++ I + V T Sbjct: 13 YPKKIAATCFFGGCNFSCPFCYNSQLV-NFKGSFM---DDSIFFEYLDKRKGIVDAVCIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P L+ + L + +K ++ S + +D PE++Q L +AG Y+A Sbjct: 69 GGEP-TLNEEYLTEFIKKIKN---------RSLLVKLDTNGSRPEVLQRLLDAGLLDYVA 118 Query: 211 IHANHPYE-------FS--EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 + P E FS ++ ++ L N+ I ++ + K ++ +IL N+ R Sbjct: 119 MDVKAPLEKYPQITGFSDIDKIKKSVEILKNSNIDYEFRTTVNKNLHTVEDIL-NIARLL 177 Query: 262 VELR---IKPY 269 + R IKPY Sbjct: 178 KDSRLYVIKPY 188 >gi|312128493|ref|YP_003993367.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor hydrothermalis 108] gi|311778512|gb|ADQ07998.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor hydrothermalis 108] Length = 231 Score = 38.5 bits (88), Expect = 1.4, Method: Compositional matrix adjust. Identities = 49/191 (25%), Positives = 86/191 (45%), Gaps = 29/191 (15%) Query: 93 YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 YP +I C C FC+ ++V + KG+ + D Y+ ++ I + V T Sbjct: 13 YPKKIAATCFFGGCNFSCPFCYNSDLV-NFKGSFM---DDSIFFEYLDKRKGIVDAVCIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P L+ + L + +K ++ S + +D PE++Q L +AG Y+A Sbjct: 69 GGEP-TLNEEYLTEFIKKIKN---------RSLLVKLDTNGSRPEVLQRLLDAGLLDYVA 118 Query: 211 IHANHPYE-------FS--EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 + P E FS ++ +I L N+ I ++ + K ++ +IL N+ R Sbjct: 119 MDVKAPLEKYPQITGFSDVDKIRRSIEILKNSNIDYEFRTTVNKNLHTVEDIL-NIARLL 177 Query: 262 VELR---IKPY 269 + R IKPY Sbjct: 178 KDSRLYVIKPY 188 >gi|326407735|gb|ADZ64806.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis subsp. lactis CV56] Length = 275 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 15/113 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ + L + C C +CF +EM T SK+ +AY EK ++ V GGD Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEM--KMLNTKEISKEDLEKIAYYLEKYKVPLVAICGGD 67 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--ELIQCLKEAG 204 P++ H +L I VQ+L H P + ++ + + LK AG Sbjct: 68 PIL--HPKL---------IDFVQLLSEHKNYPTIATNAVDVSYKYLYQLKSAG 109 >gi|281492812|ref|YP_003354792.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis subsp. lactis KF147] gi|281376464|gb|ADA65950.1| Fe-S oxidoreductase, radical SAM superfamily [Lactococcus lactis subsp. lactis KF147] Length = 275 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 15/113 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ + L + C C +CF +EM T SK+ +AY EK ++ V GGD Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEM--KMLNTKEISKEDLEKIAYYLEKYKVPLVAICGGD 67 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--ELIQCLKEAG 204 P++ H +L I VQ+L H P + ++ + + LK AG Sbjct: 68 PIL--HPKL---------IDFVQLLSEHKNYPTIATNAVDVSYKYLYQLKSAG 109 >gi|251798763|ref|YP_003013494.1| radical SAM protein [Paenibacillus sp. JDR-2] gi|247546389|gb|ACT03408.1| Radical SAM domain protein [Paenibacillus sp. JDR-2] Length = 379 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 16/112 (14%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--EVIFTGGDPLILSHK 160 ++C VYCRFC GS +G VLS+ E L IQE + E++ GG L Sbjct: 63 NICDVYCRFCAFYRAPGSNEGYVLSN---ETILNKIQETIDVGGTEILMQGGTNPNLPFS 119 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEAG 204 +L+ ++ +H + HS P + Q++ E+I+ L EAG Sbjct: 120 YYTDLLREIK--QHFPDITMHSFSP-AEIQKMKEVSEGLSLDEVIRQLNEAG 168 >gi|254000035|ref|YP_003052098.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp. SIP3-4] gi|253986714|gb|ACT51571.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp. SIP3-4] Length = 336 Score = 38.5 bits (88), Expect = 1.5, Method: Compositional matrix adjust. Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 21/197 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R D I L + C C +C +M + VLS ++ A L I + + +V TG Sbjct: 17 RKVDYIRLSITDRCDFRCVYCMAEDMTFLPRDEVLSLEEC-ARLVKIFVQMGVSKVRITG 75 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210 G+PL+ K Q + + + ++ ++ L + ++ Q L++AG K + I+ Sbjct: 76 GEPLV--RKNAQWLFEEIGHLPGLKELVVTTNGSQLEHQ------AAALRQAGVKRINIS 127 Query: 211 IHANHPYEFSE--------EAIAAISRLANAGIILLS-QSVLLKGINDDPEILANLMRTF 261 + + + F + + + I +AG + SV+++G+NDD + +L+R Sbjct: 128 VDSLNADRFRKITRVGDLSKVLRGIQAAKDAGFDNIKLNSVIMRGVNDDEAL--DLLRFA 185 Query: 262 VELRIKPYYLHHPDLAA 278 ++ +I Y+ L A Sbjct: 186 IDQQIDISYIEEMPLGA 202 >gi|218283069|ref|ZP_03489164.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989] gi|218216138|gb|EEC89676.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989] Length = 464 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 7/101 (6%) Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q + KE+ + E+ +P+ + G++ + L + H C + C +CF + Sbjct: 65 QILELKEQGRLFSEDTYEPMAGQLKAKTSGVIKA----LCLHIAHTCNLNCSYCFASQGK 120 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQI---WEVIFTGGDPLI 156 ++S + + AL ++ E S EV F GG+PL+ Sbjct: 121 YHGDRALMSFETGKRALDFLVENSGTRRNLEVDFFGGEPLM 161 >gi|91772361|ref|YP_565053.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM 6242] gi|91711376|gb|ABE51303.1| Radical SAM family protein [Methanococcoides burtonii DSM 6242] Length = 206 Score = 38.5 bits (88), Expect = 1.7, Method: Compositional matrix adjust. Identities = 54/197 (27%), Positives = 90/197 (45%), Gaps = 37/197 (18%) Query: 78 IGDNNHSPLKGI---VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134 IGD + + G+ + D + L + + C C FC R G + +K E + Sbjct: 2 IGDKLNGDIAGVGTLCYEGHDNLYLNITNRCSANCVFCIRDISDGIYGSNLRLTK--EPS 59 Query: 135 LAYIQEK-----SQIW-EVIFTG-GDPLILSHKRLQKVLKTLRYIK-HVQILRFHSR--V 184 L I +K +I+ EV+FTG G+P I RL VL+ R++K H +R + Sbjct: 60 LDEILDKLGSLDLEIYREVVFTGFGEPTI----RLDIVLEVTRWLKEHGMKVRIDTNGHA 115 Query: 185 PIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSE----------EAIAAISRLA-N 232 ++ P+R ++I LK+AG V ++++A + E EA+ ++ A N Sbjct: 116 QLLHPER---DVISELKDAGLDEVSVSLNAESKERYDELCQPDLENAYEAMLEFTKEAVN 172 Query: 233 AGIILLSQSVLLKGIND 249 AGI + + G ND Sbjct: 173 AGI---ESRMTVVGFND 186 >gi|325479346|gb|EGC82442.1| six-Cys-in-45 modification radical SAM protein [Anaerococcus prevotii ACS-065-V-Col13] Length = 460 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 10/117 (8%) Query: 46 LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI---LLKLL 102 +IN ++ ND QF+ EE+N L E D+ + L + P I L + Sbjct: 47 IINKYDINDD---QFLEAYEEVNELVNEGL-LFSDDIYEDLSIDITNKPTTIKALCLNVA 102 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WEVIFTGGDPLI 156 H C + C +CF + S +++ + +A+ ++ E S ++ F GG+PL+ Sbjct: 103 HTCNLSCEYCFAKGGKYSGPDAIMTEEVARSAIDFLLENSGSHYNLDIDFFGGEPLL 159 >gi|315924152|ref|ZP_07920378.1| oxygen-independent coproporphyrinogen III oxidase 2 [Pseudoramibacter alactolyticus ATCC 23263] gi|315622554|gb|EFV02509.1| oxygen-independent coproporphyrinogen III oxidase 2 [Pseudoramibacter alactolyticus ATCC 23263] Length = 512 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 11/140 (7%) Query: 104 VCPVYCRFCFRREMVGSQKGTV-------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +CP C +C + +KG + L S+ + I+ + ++ + GG P + Sbjct: 196 ICPAKCSYCSFVSTIADKKGVLCADYLQGLISEIRQMGAWMIKRQLRVDTLYIGGGTPSV 255 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 LS ++++++L L+ + V P+ PE + LK G + +P Sbjct: 256 LSVRQIERLLAALKESRLVHSKLREFTFEAGRPETTTPEKLAVLKAFG----VDRLCLNP 311 Query: 217 YEFSEEAIAAISRLANAGII 236 + E +AA+ R A I Sbjct: 312 QSMNNETLAAVGRFHTAADI 331 >gi|296188253|ref|ZP_06856645.1| putative molybdenum cofactor biosynthesis protein A [Clostridium carboxidivorans P7] gi|296047379|gb|EFG86821.1| putative molybdenum cofactor biosynthesis protein A [Clostridium carboxidivorans P7] Length = 262 Score = 38.5 bits (88), Expect = 1.8, Method: Compositional matrix adjust. Identities = 36/131 (27%), Positives = 64/131 (48%), Gaps = 23/131 (17%) Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 +I ++ +TGG+PLIL K + ++ I+ ++ + I + +L LKE Sbjct: 2 EIKKIRYTGGEPLIL--KNISSLISETSKIQQIK------DIAITTNGILLYDLADELKE 53 Query: 203 AG-KPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 AG K V I++ +FS + + AI + + GI + +VL+KGINDD Sbjct: 54 AGLKRVNISLDTLKEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDDE-- 111 Query: 254 LANLMRTFVEL 264 ++ F++L Sbjct: 112 ----IKNFIDL 118 >gi|313206128|ref|YP_004045305.1| radical sam domain protein [Riemerella anatipestifer DSM 15868] gi|312445444|gb|ADQ81799.1| Radical SAM domain protein [Riemerella anatipestifer DSM 15868] gi|315022935|gb|EFT35958.1| Queuosine Biosynthesis QueE Radical SAM [Riemerella anatipestifer RA-YM] Length = 209 Score = 38.1 bits (87), Expect = 1.8, Method: Compositional matrix adjust. Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 9/132 (6%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 L C V C +C +E ++ +++ A +A K+ ++ TGG+PL+ + + Sbjct: 40 LGGCDVGCHWCDVKESWDPNLHPLMDAEEV-AQIAANHSKT----IVLTGGEPLMWNLEI 94 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPY 217 L K LK L H++ + +D ++P+ KE+ + + I NH + Sbjct: 95 LTKKLKDLGCTIHIETSGAYEISGHIDWVCLSPKKTGLPKESIYAKANELKVIIFNNHDF 154 Query: 218 EFSEEAIAAISR 229 +F+EE + +S+ Sbjct: 155 KFAEEQASKVSQ 166 >gi|145220160|ref|YP_001130869.1| GTP cyclohydrolase subunit MoaA [Prosthecochloris vibrioformis DSM 265] gi|145206324|gb|ABP37367.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeovibrioides DSM 265] Length = 351 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 55/260 (21%), Positives = 106/260 (40%), Gaps = 30/260 (11%) Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 N PL HR + + C + C +C R E G S L + Sbjct: 22 NTSPPLSDTFHRQVSYARIAVTGACNLRCAYCMREEHESDSSGRTKMSFTELTTLISVLA 81 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 ++ I ++ TGG+PL+ + ++ T + ++ + + ++D + ++ L + Sbjct: 82 EAGITKIRLTGGEPLLRGD--IADLVATAKNTPGIKTVSITTNGLLLD-RHLDALLSAGI 138 Query: 201 KEAGKPV-------YIAIHANHPYEFSEEAIAAISRLAN-AGIILLSQSVLLKGINDDP- 251 + ++AI + +E ++ A + RL + + L V+L+GINDD Sbjct: 139 DAVNMSIDSLRADRFLAITRRNEFERTK---ANLDRLLSLESVPLKINVVMLRGINDDEI 195 Query: 252 EILANLMRT------FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL---KEKIS 302 + NL R F+EL +P+ H T F L +++ + ++ S E++ Sbjct: 196 KDFTNLTREHPISVRFMEL--QPFDDHQ---IWRTGKF-LGMDKIRGLLQSAHPGMEELQ 249 Query: 303 GLCQPFYILDLPGGYGKVKI 322 G ++ LPG G I Sbjct: 250 GSGTEYFSFTLPGYRGSWAI 269 >gi|261403228|ref|YP_003247452.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7] gi|261370221|gb|ACX72970.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7] Length = 243 Score = 38.1 bits (87), Expect = 1.9, Method: Compositional matrix adjust. Identities = 45/171 (26%), Positives = 74/171 (43%), Gaps = 28/171 (16%) Query: 105 CPVYCRFCFRR--------EMVGS----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 CP+ C +C E S +K + S +D A+ ++ ++ V FTGG Sbjct: 28 CPLNCLYCDEEHKKHVNLVEQYPSSGKFEKQNLESEEDIIKAVNKLK-TPDLFSVSFTGG 86 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILR----FHSRVPIVDPQRINPELIQCLKEAGKPVY 208 +PL L HK ++++ K L+ + + L F RV D I+ +L K G+ Y Sbjct: 87 EPL-LYHKEIKEISKILKNLGYRTFLESNGIFPERVFHFDIASIDIKLKDHFKNIGEEEY 145 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG--INDDPEILANL 257 I+ N + I + N G + ++ V+ K IND EI +L Sbjct: 146 KKIYKNE--------LKTIKKFYNMGTDVYAKIVITKDSKINDLVEISKDL 188 >gi|222100234|ref|YP_002534802.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359] gi|221572624|gb|ACM23436.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359] Length = 437 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 18/95 (18%) Query: 80 DNNHSPLKGI-----VHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-- 129 D+N L+ + +RY DR L + L H C C +C+++ ++ G+ +S K Sbjct: 48 DDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCVYCYQK-VIHISSGSYISEKVQ 106 Query: 130 -----DTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 D E L Y +K + V F GG+PL+L Sbjct: 107 SNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEE 139 >gi|148270585|ref|YP_001245045.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1] gi|170289289|ref|YP_001739527.1| radical SAM domain-containing protein [Thermotoga sp. RQ2] gi|281412894|ref|YP_003346973.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10] gi|147736129|gb|ABQ47469.1| Radical SAM domain protein [Thermotoga petrophila RKU-1] gi|170176792|gb|ACB09844.1| Radical SAM domain protein [Thermotoga sp. RQ2] gi|281373997|gb|ADA67559.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10] Length = 454 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 18/95 (18%) Query: 80 DNNHSPLKGI-----VHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-- 129 D+N L+ + +RY DR L + L H C C +C+++ ++ G+ +S K Sbjct: 65 DDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCVYCYQK-VIHISSGSYISEKVQ 123 Query: 130 -----DTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 D E L Y +K + V F GG+PL+L Sbjct: 124 SNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEE 156 >gi|257075637|ref|ZP_05569998.1| molybdenum cofactor biosynthesis protein A [Ferroplasma acidarmanus fer1] Length = 315 Score = 38.1 bits (87), Expect = 2.2, Method: Compositional matrix adjust. Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 28/166 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 ++L +C +C FC M G+++ + + + + + ++ FTGG+PL L Sbjct: 23 IQLNAICNFHCIFC---HMEGTERSMQYMTPEQIENVVAVAASHGVNKIKFTGGEPL-LR 78 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPY 217 L+ V +T ++I + + P+L + LKEAG V I++HA Y Sbjct: 79 EDILEIVRRTRKHIT--------GNISLTTNGVELPKLAKGLKEAGLDRVNISMHAIDEY 130 Query: 218 EFS-------------EEAIAAISRLANAGIILLSQSVLLKGINDD 250 F ++ I A +R A G I ++ VL+K IN+D Sbjct: 131 NFHFITDTKKNFLPIVKQGIQA-ARDAGLGPIKIN-FVLMKNINED 174 >gi|320017067|gb|ADW00639.1| coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 456 Score = 37.7 bits (86), Expect = 2.4, Method: Compositional matrix adjust. Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 17/135 (12%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGT-----VLSSKD-- 130 D N S + V RYP R L +H+ C C FC ++V Q+ V+ K+ Sbjct: 35 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIR 94 Query: 131 TEAALAYIQEKSQI-WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 AAL ++ SQ+ W GG P L+ ++ ++ LR +H L + VDP Sbjct: 95 QRAALFTGRQVSQMHW-----GGTPTYLNKTQISHLMTVLR--EHFDFLPDAEQSIEVDP 147 Query: 190 QRINPELIQCLKEAG 204 + I +++ L+ G Sbjct: 148 REIELDVLDHLRAEG 162 >gi|302670902|ref|YP_003830862.1| Fe-S oxidoreductase [Butyrivibrio proteoclasticus B316] gi|302395375|gb|ADL34280.1| Fe-S oxidoreductase [Butyrivibrio proteoclasticus B316] Length = 458 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 54/217 (24%), Positives = 87/217 (40%), Gaps = 53/217 (24%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI-------LL 99 IN D Q++ Q E L++L + + L I Y + + L+ Sbjct: 38 INDQELEDVFDFQYLVQDEHLDVLIRKA------DGEEWLLDIDKDYDEDLGIEFENGLM 91 Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 C C FCF +M + T L KD ++ L+++Q G+ + L++ Sbjct: 92 DDYRSCSNKCIFCFIDQMPKGMRKT-LYFKDDDSRLSFLQ------------GNYVTLTN 138 Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 + + + L+Y H+ PI + Q NPEL +C K G Sbjct: 139 MSDKDIDRILKY--HLS--------PINISFQTTNPEL-RC-KMLGN------------R 174 Query: 219 FSEEAIAAISRLA--NAGIILLSQSVLLKGINDDPEI 253 F+ EA+ + RL GI + Q VL KG+ND E+ Sbjct: 175 FAGEALKKVDRLCAPGTGIEINGQIVLCKGVNDGDEL 211 >gi|78358007|ref|YP_389456.1| ribosomal RNA large subunit methyltransferase N [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123727640|sp|Q30X35|RLMN_DESDG RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|78220412|gb|ABB39761.1| 23S rRNA m(2)A-2503 methyltransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 358 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 46/177 (25%), Positives = 77/177 (43%), Gaps = 30/177 (16%) Query: 105 CPVYCRFC------FRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLI 156 C + C FC F R M S+ G VL +++ L + E+ + ++F G G+PL+ Sbjct: 112 CAMGCTFCATGTLGFERNMTMSEILGQVLVAREY---LNDVAERPILRNLVFMGMGEPLL 168 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 L +++++L + L+F R V +NPE ++ L E+G Y+A+ + P Sbjct: 169 ----NLDEIMRSLHTLNSELGLQFSPRRITVSTCGVNPEGLRRLGESG-LAYLAVSLHAP 223 Query: 217 Y-EFSEEAIAAISRLANAGIILLSQS-------------VLLKGINDDPEILANLMR 259 E + +R I QS +LL G+ND E L+R Sbjct: 224 TQELRRTIMPKAARWELNDFIEALQSYPLKTRERITFEYLLLGGVNDSLEHAKQLVR 280 >gi|255523321|ref|ZP_05390291.1| molybdenum cofactor biosynthesis protein A [Clostridium carboxidivorans P7] gi|255512975|gb|EET89245.1| molybdenum cofactor biosynthesis protein A [Clostridium carboxidivorans P7] Length = 318 Score = 37.7 bits (86), Expect = 2.5, Method: Compositional matrix adjust. Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 27/184 (14%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIF 149 R D + + L C + C +C + G K E L I+ I ++ + Sbjct: 7 RNIDYLRISLTDRCNLRCIYCMPEQ--GVSKKCHEDVIRFEEVLKIIKSAVPLGIKKIRY 64 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208 TGG+PLIL K + ++ I+ ++ + I + +L LKEAG K V Sbjct: 65 TGGEPLIL--KNISSLISETSKIQQIK------DIAITTNGILLYDLADELKEAGLKRVN 116 Query: 209 IAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I++ +FS + + AI + + GI + +VL+KGINDD ++ Sbjct: 117 ISLDTLKEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDDE------IKN 170 Query: 261 FVEL 264 F++L Sbjct: 171 FIDL 174 >gi|217969710|ref|YP_002354944.1| coproporphyrinogen III oxidase [Thauera sp. MZ1T] gi|217507037|gb|ACK54048.1| oxygen-independent coproporphyrinogen III oxidase [Thauera sp. MZ1T] Length = 473 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 26/132 (19%), Positives = 62/132 (46%), Gaps = 13/132 (9%) Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 C C +C +++ G +K+ E A ++ Q+ ++ GG P LSH Sbjct: 77 CNTICYYCACNKIITKDHGRSAKYLKYLAKEIEMQAACLEGSRQVTQLHLGGGTPTFLSH 136 Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYE 218 +++++ +R +H ++ VDP++++ + ++ L E G + + + + Sbjct: 137 DEMRELMAAVR--EHFTLVPNGEYSIEVDPRKVDFDTVKLLAELGFNRMSVGVQ-----D 189 Query: 219 FSEEAIAAISRL 230 F+E+ A++R+ Sbjct: 190 FAEDVQQAVNRI 201 >gi|192290582|ref|YP_001991187.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas palustris TIE-1] gi|226707378|sp|B3QCQ7|MOAA_RHOPT RecName: Full=Molybdenum cofactor biosynthesis protein A gi|192284331|gb|ACF00712.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas palustris TIE-1] Length = 344 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 39/184 (21%), Positives = 79/184 (42%), Gaps = 17/184 (9%) Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 P+ R D + + + C C +C +M + +L+ ++ + + K + Sbjct: 15 PMTDPFGRTIDYLRVSITDRCDFRCVYCMAEDMTFLPRADLLTLEELDRLCSAFIAKG-V 73 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 ++ TGG+PL+ + + ++++L R++K + R EL C Sbjct: 74 RKLRLTGGEPLV--RRNMMSLVRSLSRHLKTGALDELTLTTNGSQLARFAAELADC---G 128 Query: 204 GKPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + V +++ P EF + +A I+ AG+ + SV+LKG N+D + Sbjct: 129 VRRVNVSLDTLDPDEFRRITRWGDLDRVLAGINAARAAGLAVKINSVVLKGSNEDE--IP 186 Query: 256 NLMR 259 +LMR Sbjct: 187 SLMR 190 >gi|329961551|ref|ZP_08299632.1| radical SAM domain protein [Bacteroides fluxus YIT 12057] gi|328531763|gb|EGF58592.1| radical SAM domain protein [Bacteroides fluxus YIT 12057] Length = 458 Score = 37.7 bits (86), Expect = 2.6, Method: Compositional matrix adjust. Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 7/71 (9%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTG 151 D + L + H C + C++CF + + +V+S A+AY+ E S+ + + F G Sbjct: 82 DMLTLNVTHGCNMSCKYCFASTL--QDRKSVMSLSVVRKAIAYMLEGNPDSERYTIYFFG 139 Query: 152 GDPLILSHKRL 162 G+PL+ HK+ Sbjct: 140 GEPLL--HKQF 148 >gi|225424671|ref|XP_002262749.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296086557|emb|CBI32146.3| unnamed protein product [Vitis vinifera] Length = 439 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 24/166 (14%) Query: 105 CPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161 C + C+FC+ M ++ T + + A + E I V+F G G+P Sbjct: 190 CAMNCQFCYTGRMGLTRHLTAAEIVEQAVYARRLFSSEVGSITNVVFMGMGEPF----HN 245 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221 ++ V+K + H Q L F R V + P+L L+E+ +A+ N + Sbjct: 246 IESVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLKHFLRESN--CALAVSLNATTDEVR 303 Query: 222 EAIAAISRLANAGIIL---------------LSQSVLLKGINDDPE 252 + I+R N ++L L + V+L G+ND E Sbjct: 304 NWVMPINRKYNLSLLLQTLREELRSKHNYKVLFEYVMLAGVNDSLE 349 >gi|78776805|ref|YP_393120.1| coproporphyrinogen III oxidase [Sulfurimonas denitrificans DSM 1251] gi|78497345|gb|ABB43885.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Sulfurimonas denitrificans DSM 1251] Length = 455 Score = 37.7 bits (86), Expect = 2.7, Method: Compositional matrix adjust. Identities = 31/145 (21%), Positives = 64/145 (44%), Gaps = 28/145 (19%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L C C FC + S++ +L ++ + +++ + ++ F GG P Sbjct: 54 LPFCKNACYFCGCNVVFTSKEDKMLRYLEYLKRELKILSSFVDCNRSVIQMHFGGGTPTF 113 Query: 157 LSHKRLQKVLKTLR-----YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG------- 204 S ++L +V+K +R ++K +I +DP+ I+ + ++ L + G Sbjct: 114 FSAEQLDEVIKEIRHFFPNFVKEAEI------SCEIDPRHIDEDQMRVLSQNGFNRVSFG 167 Query: 205 -----KPVYIAIHANHPYEFSEEAI 224 + V IA+H PYE ++ A+ Sbjct: 168 IQDFNEKVQIAVHRVQPYEITKYAM 192 >gi|115438803|ref|NP_001043681.1| Os01g0640800 [Oryza sativa Japonica Group] gi|113533212|dbj|BAF05595.1| Os01g0640800 [Oryza sativa Japonica Group] gi|218188735|gb|EEC71162.1| hypothetical protein OsI_03021 [Oryza sativa Indica Group] gi|222618932|gb|EEE55064.1| hypothetical protein OsJ_02780 [Oryza sativa Japonica Group] Length = 405 Score = 37.7 bits (86), Expect = 2.8, Method: Compositional matrix adjust. Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 29/177 (16%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALA---YIQEKSQIWEVIFTG-GDPLILSHK 160 C + C+FCF M G +K + +A A + E I V+F G G+PL Sbjct: 157 CAMNCQFCFTGRM-GLRKHLSTAEIVEQAVFARRLFSDEFGSITNVVFMGMGEPL----H 211 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220 + VLK + Q L+F R V + P++ + L+E+ +A+ N + Sbjct: 212 NIDNVLKASAIMVDEQGLQFSPRKVTVSTSGLVPQIKRFLQESN--CALAVSLNATTDEV 269 Query: 221 EEAIAAISRLANAGIIL---------------LSQSVLLKGIN---DDPEILANLMR 259 I I+R N ++L + V+L G+N DD + L +L+R Sbjct: 270 RNWIMPINRKYNLSLLLGTLREEIRLKKKYKVFFEYVMLAGVNDSVDDAKRLVDLVR 326 >gi|238794560|ref|ZP_04638168.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia intermedia ATCC 29909] gi|238726140|gb|EEQ17686.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia intermedia ATCC 29909] Length = 459 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 12/133 (9%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKG------TVLSSKDT 131 D N S + V RYP R L +H+ C C FC ++V Q+ VL + Sbjct: 37 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIC 96 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 + A + Q+ ++ + GG P L+ K++ ++ LR + L + VDP+ Sbjct: 97 QRATFFA--GRQVSQMHWGGGTPTYLNKKQITHLMNLLR--DNFDFLPGAEQSIEVDPRE 152 Query: 192 INPELIQCLKEAG 204 I +++ L+ G Sbjct: 153 IELDVLDHLRAEG 165 >gi|150018969|ref|YP_001311223.1| radical SAM domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905434|gb|ABR36267.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052] Length = 453 Score = 37.7 bits (86), Expect = 2.9, Method: Compositional matrix adjust. Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 10/113 (8%) Query: 65 EELNILPEE----REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +E+ L EE ED + HS + Y I L ++H C + C++CF E Sbjct: 63 DEIQELAEEGILYSEDQYEEIAHSSMDD--RDYIKAICLNVIHGCNLRCKYCFADEGEYH 120 Query: 121 QKGTVLSSKDTEAALAYIQEKS---QIWEVIFTGGDPLILSHKRLQKVLKTLR 170 G V+S+ + A+ Y+ ++S + E+ GG+P ++ +++++K R Sbjct: 121 GHGGVMSADTAKKAIDYVIKRSGPRKNIEIDLFGGEPTLIMDT-IKEIIKYAR 172 >gi|291560706|emb|CBL39506.1| Arylsulfatase regulator (Fe-S oxidoreductase) [butyrate-producing bacterium SSC/2] Length = 458 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKG--TVLSSKDTEAALAYIQEKS---QIWEVIFTG 151 + L + H C + CR+CF E G KG ++S++ + AL ++ E S + EV F G Sbjct: 94 LCLHIAHDCNLACRYCFAEE--GEYKGRRALMSAEVGKKALDFLVENSGNRRNLEVDFFG 151 Query: 152 GDPLI 156 G+PL+ Sbjct: 152 GEPLM 156 >gi|317499049|ref|ZP_07957330.1| radical SAM superfamily protein [Lachnospiraceae bacterium 5_1_63FAA] gi|316893699|gb|EFV15900.1| radical SAM superfamily protein [Lachnospiraceae bacterium 5_1_63FAA] Length = 458 Score = 37.7 bits (86), Expect = 3.0, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKG--TVLSSKDTEAALAYIQEKS---QIWEVIFTG 151 + L + H C + CR+CF E G KG ++S++ + AL ++ E S + EV F G Sbjct: 94 LCLHIAHDCNLACRYCFAEE--GEYKGRRALMSAEVGKKALDFLVENSGNRRNLEVDFFG 151 Query: 152 GDPLI 156 G+PL+ Sbjct: 152 GEPLM 156 >gi|329766234|ref|ZP_08257792.1| radical SAM domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137293|gb|EGG41571.1| radical SAM domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 237 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 5/66 (7%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT 150 Y + L L CP C +C +E + G S E A I K+Q ++V FT Sbjct: 19 YGTKTLFVRLAGCPFTCFYCDTKESLPLDSGQEYS---IEEACTLIDSNLKNQTYKVNFT 75 Query: 151 GGDPLI 156 GGDPLI Sbjct: 76 GGDPLI 81 >gi|167766768|ref|ZP_02438821.1| hypothetical protein CLOSS21_01276 [Clostridium sp. SS2/1] gi|167711522|gb|EDS22101.1| hypothetical protein CLOSS21_01276 [Clostridium sp. SS2/1] Length = 458 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 7/65 (10%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKG--TVLSSKDTEAALAYIQEKS---QIWEVIFTG 151 + L + H C + CR+CF E G KG ++S++ + AL ++ E S + EV F G Sbjct: 94 LCLHIAHDCNLACRYCFAEE--GEYKGRRALMSAEVGKKALDFLVENSGNRRNLEVDFFG 151 Query: 152 GDPLI 156 G+PL+ Sbjct: 152 GEPLM 156 >gi|330503007|ref|YP_004379876.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01] gi|328917293|gb|AEB58124.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01] Length = 460 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 9/107 (8%) Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 C C +C +++ +G L ++ E YI + I ++ F GG P LSH Sbjct: 63 CAHICYYCACNKVITKDRGRALPYLEKLEREIEIVSRYIDKNQPIEQLHFGGGTPTFLSH 122 Query: 160 KRLQKVLKTLRYIKHVQILRFHS--RVPIVDPQRINPELIQCLKEAG 204 L+++++ LR +H +L S +DP+ + + L+E G Sbjct: 123 DELRRLMQHLR--QHFNLLDDDSGDYSIEIDPREADWSTMGLLRELG 167 >gi|212711633|ref|ZP_03319761.1| hypothetical protein PROVALCAL_02708 [Providencia alcalifaciens DSM 30120] gi|212685735|gb|EEB45263.1| hypothetical protein PROVALCAL_02708 [Providencia alcalifaciens DSM 30120] Length = 457 Score = 37.4 bits (85), Expect = 3.1, Method: Compositional matrix adjust. Identities = 52/224 (23%), Positives = 87/224 (38%), Gaps = 31/224 (13%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-----LSSKDTE 132 D N RYPDR L +H+ C C FC ++V QK + K+ Sbjct: 35 DYNEQAFIEATQRYPDRPLSLYVHIPFCHKLCYFCGCNKLVTRQKHKADEYLEVIEKEII 94 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQR 191 A ++ ++ + ++ + GG P L ++ ++ L+ H + + I VDP+ Sbjct: 95 QRAALLKNRT-VTQMHWGGGTPTYLDKAQVSHLVGLLKKYFHFAP---DAEMSIEVDPRE 150 Query: 192 INPELIQCLKEAG------------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 I ++I L+ G K V + ++ EF A I R G S Sbjct: 151 IELDMIDHLRSEGFNRLSMGVQDFNKEVQVLVNREQDEEF---IFALIKRAKETGFTSTS 207 Query: 240 QSVLLKGINDDPEILANLMRTFVEL---RIKPY-YLHHPDLAAG 279 ++ PE A ++ EL R+ + Y H P+L A Sbjct: 208 IDLIYGLPKQTPESFAFTLKKVAELAPDRLSVFNYAHLPNLFAA 251 >gi|257085347|ref|ZP_05579708.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis Fly1] gi|256993377|gb|EEU80679.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis Fly1] Length = 324 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 40/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + +K +R D + L L C + C +C + K L + D L I K Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I +V TGG+PL+ + L IK ++ + +V + Q LKEA Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113 Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232 G V I++ P EF E I + +L N Sbjct: 114 GLDGVNISLDTLDPEEFRE--ITRVGQLRN 141 >gi|15644078|ref|NP_229127.1| astB/chuR-related protein [Thermotoga maritima MSB8] gi|4981884|gb|AAD36397.1|AE001787_2 astB/chuR-related protein [Thermotoga maritima MSB8] Length = 454 Score = 37.4 bits (85), Expect = 3.2, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 18/95 (18%) Query: 80 DNNHSPLKGI-----VHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-- 129 D+N L+ + +RY DR L + L H C C +C+++ ++ G+ +S K Sbjct: 65 DDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCVYCYQK-VLHISSGSYISEKVQ 123 Query: 130 -----DTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 D E L Y +K + V F GG+PL+L Sbjct: 124 SNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEE 156 >gi|29375960|ref|NP_815114.1| molybdopterin cofactor biosynthesis protein A, putative [Enterococcus faecalis V583] gi|256965220|ref|ZP_05569391.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis HIP11704] gi|257419205|ref|ZP_05596199.1| predicted protein [Enterococcus faecalis T11] gi|29343422|gb|AAO81184.1| molybdopterin cofactor biosynthesis protein A, putative [Enterococcus faecalis V583] gi|256955716|gb|EEU72348.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis HIP11704] gi|257161033|gb|EEU90993.1| predicted protein [Enterococcus faecalis T11] Length = 324 Score = 37.4 bits (85), Expect = 3.4, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + +K +R D + L L C + C +C + K L + D L I K Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKED 61 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I +V TGG+PL+ L ++K ++ I ++ + + + ++ E Q LKEA Sbjct: 62 IKKVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEA 113 Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232 G + I++ P EF E I + +L N Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141 >gi|146296194|ref|YP_001179965.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409770|gb|ABP66774.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 231 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 27/190 (14%) Query: 93 YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 YP +I C C FC+ ++V + KG + D Y+ ++ I + V T Sbjct: 13 YPKKIAATCFFGGCNFSCPFCYNSQLV-NFKGNFM---DDSIFFEYLDKRKGIVDAVCIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P L+ + L + +K IK +L +D PE++Q L +AG Y+A Sbjct: 69 GGEP-TLNEEYLTEFIKK---IKQRDLL------VKLDTNGSRPEVLQRLLDAGLLDYVA 118 Query: 211 IHANHPYE-------FSE--EAIAAISRLANAGIILLSQSVLLKGINDDPEIL--ANLMR 259 + P E FSE + +I L N+ I ++ + K ++ +IL A L++ Sbjct: 119 MDVKAPLEKYPQITGFSEVDKIRRSIEILKNSNIDYEFRTTVNKNLHTVEDILNIARLLK 178 Query: 260 TFVELRIKPY 269 IKPY Sbjct: 179 DAKLYVIKPY 188 >gi|189346577|ref|YP_001943106.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Chlorobium limicola DSM 245] gi|189340724|gb|ACD90127.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Chlorobium limicola DSM 245] Length = 244 Score = 37.4 bits (85), Expect = 3.6, Method: Compositional matrix adjust. Identities = 56/202 (27%), Positives = 85/202 (42%), Gaps = 20/202 (9%) Query: 93 YPDRILLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQIWEVIF 149 YP I + V C C +C E+V ++ TV++ + E + +S + V+ Sbjct: 28 YPGCIAAVIFTVGCNFRCSYCHNPELVEPER-TVVNRRIPFHEVVRLVGRNRSCLDGVVV 86 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC----LKEAGK 205 TGG+P + H L + L+T R + L + P + + L+ C +K + Sbjct: 87 TGGEPAM--HASLPESLRTFRKLGLRVKLDTNGSYPEMLDLLLQERLVDCVALDIKAPLR 144 Query: 206 PVYIAIHANHPYEFSEEAIAAISR----LANAGIILLSQSVLLKGI---NDDPEILANLM 258 P P SE + I R L N+GI L+ +S LLKGI D E+ A Sbjct: 145 PSRYEEVVGIPC--SEAMMKRIERSCSLLLNSGIDLVFRSTLLKGIHASEDVEEMAAAAG 202 Query: 259 RTFVELRIKPYYLHHPDLAAGT 280 V R +P P LAAG Sbjct: 203 NRLVLQRFRPERTLRP-LAAGA 223 >gi|329929025|ref|ZP_08282827.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5] gi|328937014|gb|EGG33443.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5] Length = 334 Score = 37.4 bits (85), Expect = 3.8, Method: Compositional matrix adjust. Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 34/197 (17%) Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 PLK R D I + + C + C +C E + Q + S + AA+ + + Sbjct: 4 PLKDSFGRVHDYIRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAIMRVLAPMGV 63 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 +V TGG+PL+ K L+ ++ + I+ VQ + + ++ P + LKEAG Sbjct: 64 SKVRLTGGEPLV--RKDLETLVHKIASIEGVQDISLTTNGIML------PSKARLLKEAG 115 Query: 205 -KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS--------------QSVLLKGIND 249 + I++ + EE A I+R +L VL+KG N+ Sbjct: 116 LTRINISLDS-----LQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNE 170 Query: 250 DPEILANLMRTFVELRI 266 D +R F+ L + Sbjct: 171 DE------IRDFIALTL 181 >gi|257089787|ref|ZP_05584148.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis CH188] gi|256998599|gb|EEU85119.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis CH188] Length = 324 Score = 37.0 bits (84), Expect = 4.0, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + +K +R D + L L C + C +C + K L + D L I K Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I +V TGG+PL+ + L IK ++ + +V + Q LKEA Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113 Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232 G + I++ P EF E I + +L N Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141 >gi|222528368|ref|YP_002572250.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor bescii DSM 6725] gi|222455215|gb|ACM59477.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor bescii DSM 6725] Length = 231 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 36/128 (28%), Positives = 57/128 (44%), Gaps = 16/128 (12%) Query: 93 YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 YP +I C C FC+ E+V + KG + D Y+ ++ I + V T Sbjct: 13 YPKKIAATCFFGGCNFSCPFCYNSELV-NFKGKFM---DDSIFFEYLDKRKGIVDAVCIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P L+ + L + +K IK +L +D PE++Q L +AG Y+A Sbjct: 69 GGEP-TLNEEYLTEFIKK---IKQKNLL------VKLDTNGSKPEVLQRLLDAGLLDYVA 118 Query: 211 IHANHPYE 218 + P E Sbjct: 119 MDVKAPLE 126 >gi|171059452|ref|YP_001791801.1| coproporphyrinogen III oxidase [Leptothrix cholodnii SP-6] gi|170776897|gb|ACB35036.1| oxygen-independent coproporphyrinogen III oxidase [Leptothrix cholodnii SP-6] Length = 487 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 55/237 (23%), Positives = 88/237 (37%), Gaps = 47/237 (19%) Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 C C +C ++V G + +++ E + ++ ++ F GG P LS Sbjct: 91 CESVCYYCACNKIVTRDHGRSTAYIDALARELELVTQTLGRGQRVSQLHFGGGTPTFLSD 150 Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAG------------KP 206 L +++ LR H++ H I +DP+ ++ E + LKE G Sbjct: 151 AELDRLMGELRRHFHIEP---HGEYSIEIDPRTVSRERLAHLKELGFNRVSFGVQDFDAD 207 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMRTFVELR 265 V A+H P+E E + L I + L+ G+ PE A +R LR Sbjct: 208 VQKAVHRVQPFEQVEALMKDARELGFHSINV----DLIYGLPKQTPESFARTVRQVAGLR 263 Query: 266 IKPYYLHHPDLAA--GTSHF--------RLTIEE---GQKIVASLKEKISGLCQPFY 309 PD A G +H R+ EE G + L + ISG Y Sbjct: 264 --------PDRIAMYGYAHLPQRFKPQRRIVTEELPRGSDRIGMLSQAISGFISHGY 312 >gi|300860220|ref|ZP_07106307.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis TUSoD Ef11] gi|295112913|emb|CBL31550.1| molybdenum cofactor biosynthesis protein A, bacterial [Enterococcus sp. 7L76] gi|300849259|gb|EFK77009.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis TUSoD Ef11] Length = 321 Score = 37.0 bits (84), Expect = 4.1, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 +K +R D + L L C + C +C + K L + D L I K I Sbjct: 1 MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEDIK 60 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204 +V TGG+PL+ + L IK ++ + +V + Q LKEAG Sbjct: 61 KVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGL 112 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232 + I++ P EF E I + +L N Sbjct: 113 DGINISLDTLDPEEFRE--ITRVGQLRN 138 >gi|257416003|ref|ZP_05592997.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis AR01/DG] gi|257157831|gb|EEU87791.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis ARO1/DG] Length = 324 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + +K +R D + L L C + C +C + K L + D L I K Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I +V TGG+PL+ + L IK ++ + +V + Q LKEA Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113 Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232 G + I++ P EF E I + +L N Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141 >gi|83591857|ref|YP_425609.1| GTP cyclohydrolase subunit MoaA [Rhodospirillum rubrum ATCC 11170] gi|83574771|gb|ABC21322.1| GTP cyclohydrolase subunit MoaA [Rhodospirillum rubrum ATCC 11170] Length = 365 Score = 37.0 bits (84), Expect = 4.2, Method: Compositional matrix adjust. Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 27/183 (14%) Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQ 143 PL R + L + C + C +C +MV K +LS ++ E ALA+I + Sbjct: 32 PLVDAFGRTVTYLRLSVTDRCDLRCAYCMAEDMVFLPKRDLLSLEELETVALAFI--RRG 89 Query: 144 IWEVIFTGGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + ++ TGG+PL H+R L +++ L + LR R +D + + + Sbjct: 90 VRKIRITGGEPL---HRRGLMGLIENL-----GRTLRPAERECGLDELTLTTNATRLAEV 141 Query: 203 AG-------KPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGI 247 AG + + +++ P F + +A ++ AG+ + +V L+G+ Sbjct: 142 AGDLAARGVRRINVSLDTLRPERFRAITRRGDLDRVMAGLAAADRAGLAVKINTVALRGV 201 Query: 248 NDD 250 N+D Sbjct: 202 NED 204 >gi|228939284|ref|ZP_04101877.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228978776|ref|ZP_04139147.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis Bt407] gi|228781037|gb|EEM29244.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis Bt407] gi|228820479|gb|EEM66511.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 337 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 24/210 (11%) Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ----KGTVLSSKDTEAALAYI 138 H +K + R + + ++ C C +C E+ G K +L + D LA + Sbjct: 2 HENMKDSLERPLQDLRISVIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARL 61 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 + ++ TGG+PL L+K L TL I + L + + + + Sbjct: 62 FISMGVNKIRLTGGEPL------LRKDLPTL--IARLAKLEGLKDIGLTTNGIHLAKQAK 113 Query: 199 CLKEAG-KPVYIAIHANHPYEF---------SEEAIAAISRLANAGIILLSQSVLLKGIN 248 LKEAG K V I++ A Y F ++ + I NAG+ + V+ KG+N Sbjct: 114 ALKEAGLKRVNISLDAIEDYVFKKINGRNVSTKPVLKGIEEAKNAGLEVKVNMVVKKGMN 173 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAA 278 D + ++ R F E I+ ++ D+ + Sbjct: 174 DSQ--ILHMARYFKEKEIQLRFIEFMDVGS 201 >gi|229545922|ref|ZP_04434647.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme [Enterococcus faecalis TX1322] gi|256853030|ref|ZP_05558400.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|229308990|gb|EEN74977.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme [Enterococcus faecalis TX1322] gi|256711489|gb|EEU26527.1| conserved hypothetical protein [Enterococcus faecalis T8] Length = 324 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + +K +R D + L L C + C +C + K L + D L I K Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I +V TGG+PL+ + L IK ++ + +V + Q LKEA Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113 Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232 G + I++ P EF E I + +L N Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141 >gi|294661183|ref|YP_003573058.1| hypothetical protein Aasi_1616 [Candidatus Amoebophilus asiaticus 5a2] gi|227336333|gb|ACP20930.1| hypothetical protein Aasi_1616 [Candidatus Amoebophilus asiaticus 5a2] Length = 339 Score = 37.0 bits (84), Expect = 4.5, Method: Compositional matrix adjust. Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 25/168 (14%) Query: 105 CPVYCRFC-------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLI 156 C + C+FC R G +L +KD +I ++ G G+PL+ Sbjct: 95 CTLNCKFCHTGTQPLVRNLRAGEIVAQLLHAKDVLQDWPSHAPTRKINNIVMMGMGEPLL 154 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA--- 213 ++V K ++ + H Q L + + I P++ +C +E G + I++HA Sbjct: 155 ----NYEQVAKAIQIMMHPQGLDISRKKITLSTSGIVPQIKRCAEELGVNLAISLHAVTD 210 Query: 214 ---------NHPYEFSEEAIAAISRLANAGIILLS-QSVLLKGINDDP 251 N Y +E A + G ++ + V+LKG+ND P Sbjct: 211 ELRNHLVPINKKYPINELLQACRDYASITGCRKITFEYVMLKGVNDSP 258 >gi|257086842|ref|ZP_05581203.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis D6] gi|256994872|gb|EEU82174.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis D6] Length = 324 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 +K +R D + L L C + C +C + K L + D L I K I Sbjct: 4 MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEGIK 63 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204 +V TGG+PL+ + L IK ++ + +V + Q LKEAG Sbjct: 64 KVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGL 115 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232 + I++ P EF E I + +L N Sbjct: 116 DGINISLDTLDPEEFRE--ITRVGQLRN 141 >gi|256618973|ref|ZP_05475819.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis ATCC 4200] gi|256762400|ref|ZP_05502980.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis T3] gi|256598500|gb|EEU17676.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis ATCC 4200] gi|256683651|gb|EEU23346.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis T3] Length = 324 Score = 37.0 bits (84), Expect = 4.6, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + +K +R D + L L C + C +C + K L + D L I K Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I +V TGG+PL+ L ++K ++ I ++ + + + ++ E Q LKEA Sbjct: 62 IKKVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEA 113 Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232 G + I++ P EF E I + +L N Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141 >gi|255975948|ref|ZP_05426534.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis T2] gi|255968820|gb|EET99442.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis T2] Length = 324 Score = 37.0 bits (84), Expect = 4.7, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + +K +R D + L L C + C +C + K L + D L I K Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I +V TGG+PL+ + L IK ++ + +V + Q LKEA Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113 Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232 G + I++ P EF E I + +L N Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141 >gi|238750771|ref|ZP_04612269.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia rohdei ATCC 43380] gi|238710915|gb|EEQ03135.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia rohdei ATCC 43380] Length = 459 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 12/133 (9%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKG------TVLSSKDT 131 D N S + V RYP R L +H+ C C FC ++V Q+ VL + Sbjct: 37 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLAVLEKEIR 96 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 + A + Q+ ++ + GG P L+ ++ ++ LR ++ L + VDP+ Sbjct: 97 QRAALFA--GRQVSQMHWGGGTPTYLNKTQITHLMNLLR--ENFDFLPGAEQSIEVDPRE 152 Query: 192 INPELIQCLKEAG 204 I ++I L+ G Sbjct: 153 IELDVIDHLRAEG 165 >gi|327535035|gb|AEA93869.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis OG1RF] Length = 321 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 +K +R D + L L C + C +C + K L + D L I K I Sbjct: 1 MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEGIK 60 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204 +V TGG+PL+ + L IK ++ + +V + Q LKEAG Sbjct: 61 KVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGL 112 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232 + I++ P EF E I + +L N Sbjct: 113 DGINISLDTLDPEEFRE--ITRVGQLRN 138 >gi|256958884|ref|ZP_05563055.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis DS5] gi|257078915|ref|ZP_05573276.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis JH1] gi|256949380|gb|EEU66012.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis DS5] gi|256986945|gb|EEU74247.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis JH1] Length = 324 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + +K +R D + L L C + C +C + K L + D L I K Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I +V TGG+PL+ L ++K ++ I ++ + + + ++ E Q LKEA Sbjct: 62 IKKVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEA 113 Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232 G + I++ P EF E I + +L N Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141 >gi|144899283|emb|CAM76147.1| FeMo cofactor biosynthesis protein [Magnetospirillum gryphiswaldense MSR-1] Length = 490 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 59/269 (21%), Positives = 116/269 (43%), Gaps = 47/269 (17%) Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSS 128 +PE + I D H H Y R+ + + C + C +C R+ + + V S Sbjct: 38 MPEHVWNKIKD--HPCYSEEAHHYFARMHVAVAPACNIQCNYCNRKYDCSNESRPGVTSE 95 Query: 129 KDT--EAALAYIQEKSQIWEVIFTG----GDPL------ILSHKRLQKVLKTLRYI---- 172 + T +AAL + +++ ++ G GD + + ++++K L L++ Sbjct: 96 RMTPEQAALKVVAVANKVPQLSVLGIAGPGDSMFDWRKTFETFRQVEKRLPDLKFCVSTN 155 Query: 173 -----KHVQILRFHS------RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221 H+ L H+ + +VDP+ I + + GK Y + A+ E Sbjct: 156 GLALPDHIDALADHNIDHVTVTINMVDPE-IGTLIYPWIYHNGKR-YTGLDASKI--LHE 211 Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-----PDL 276 + ++ LA+ I++ SV++ G+ND +L+ ++ + +LH+ D Sbjct: 212 RQMESLEALASKNILVKVNSVMIPGVNDQ-----HLLEVNAAIKARGAFLHNVMPLISDA 266 Query: 277 AAGTSHFRLTIEEGQKI--VASLKEKISG 303 A GT HF LT + G + L++K++G Sbjct: 267 AHGT-HFGLTGQRGPSAAELKDLQDKLAG 294 >gi|212223647|ref|YP_002306883.1| Hypothetical molybdenum cofactor biosynthesis protein A [Thermococcus onnurineus NA1] gi|212008604|gb|ACJ15986.1| Hypothetical molybdenum cofactor biosynthesis protein A [Thermococcus onnurineus NA1] Length = 419 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 46/187 (24%), Positives = 81/187 (43%), Gaps = 39/187 (20%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--- 144 G++ R + I ++ + C + C FC E S+ + D + + + + +QI Sbjct: 108 GLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLIKWFDDVAQIKGK 167 Query: 145 -WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQ 198 E G G+PL+ + ++ VQ LR H V ++ Q +N L++ Sbjct: 168 GLEAHLDGQGEPLLYPFR-----------VELVQALREHPNVRVISMQSNGTLLNDRLVE 216 Query: 199 CLKEAG-KPVYIAIHANHPYEFSEEAIAAISR--------------LANAGIILLSQSVL 243 L EAG V +++H+ P E+A + R L NAG+ +L V+ Sbjct: 217 ELAEAGLDRVNLSLHSLDP----EKAKMLMGRKDYDLQHVLDMAEALVNAGVDVLIAPVI 272 Query: 244 LKGINDD 250 + GIND+ Sbjct: 273 IFGINDN 279 >gi|68300836|gb|AAY89357.1| RNA polymerase IV largest subunit [Marchantia polymorpha] Length = 1008 Score = 37.0 bits (84), Expect = 4.8, Method: Compositional matrix adjust. Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 11/103 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 DR+ + LH C ++C R ++ Q + + TE A+AY + S+ WE + Sbjct: 486 DRVSILRLHRCKSDGKYCEERRVLKLQDELQPVTMEILATETAIAYSSDSSEQWEGLDCA 545 Query: 152 GDPL-------ILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPI 186 L + H +L K++ T + I IL R HS+V I Sbjct: 546 ATELKQTEFFPWVGHVQLDKMVLTEKKISQEMILDRLHSKVKI 588 >gi|146296621|ref|YP_001180392.1| radical SAM domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410197|gb|ABP67201.1| Radical SAM domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 341 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 6/110 (5%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 CP C FC ++ + G ++ + + + K + E+ + GG+ + K QK Sbjct: 15 CPFKCIFCNQKIISGEKEDVTVQRIKRQIEEGLSKNKGEDVELAYYGGNFTAIDIKMQQK 74 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213 +L+ R ++++ +R +R P I+ E++ LK+ K V + I + Sbjct: 75 LLELARSFENIKSIRISTR-----PDCIDKEILGFLKDYNVKTVELGIQS 119 >gi|257082638|ref|ZP_05576999.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis E1Sol] gi|256990668|gb|EEU77970.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis E1Sol] Length = 324 Score = 37.0 bits (84), Expect = 4.9, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + +K +R D + L L C + C +C + K L + D L I K Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I +V TGG+PL+ + L IK ++ + +V + Q LKEA Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113 Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232 G + I++ P EF E I + +L N Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141 >gi|255972893|ref|ZP_05423479.1| predicted protein [Enterococcus faecalis T1] gi|257422717|ref|ZP_05599707.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|255963911|gb|EET96387.1| predicted protein [Enterococcus faecalis T1] gi|257164541|gb|EEU94501.1| conserved hypothetical protein [Enterococcus faecalis X98] Length = 324 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 61/150 (40%), Gaps = 11/150 (7%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + +K +R D + L L C + C +C + K L + D L I K Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I +V TGG+PL+ + L IK ++ + +V + Q LKEA Sbjct: 62 IKKVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEA 113 Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232 G + I++ P EF E I + +L N Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141 >gi|256962021|ref|ZP_05566192.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis Merz96] gi|256952517|gb|EEU69149.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis Merz96] Length = 324 Score = 37.0 bits (84), Expect = 5.0, Method: Compositional matrix adjust. Identities = 39/150 (26%), Positives = 66/150 (44%), Gaps = 11/150 (7%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + +K +R D + L L C + C +C + K L + D L I K Sbjct: 2 NSMKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEG 61 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I +V TGG+PL+ L ++K ++ I ++ + + + ++ E Q LKEA Sbjct: 62 IKKVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEA 113 Query: 204 G-KPVYIAIHANHPYEFSEEAIAAISRLAN 232 G + I++ P EF E I + +L N Sbjct: 114 GLDGINISLDTLDPEEFRE--ITRVGQLRN 141 >gi|302870990|ref|YP_003839626.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor obsidiansis OB47] gi|302573849|gb|ADL41640.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Caldicellulosiruptor obsidiansis OB47] Length = 231 Score = 36.6 bits (83), Expect = 5.3, Method: Compositional matrix adjust. Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 16/128 (12%) Query: 93 YPDRILLK-LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 YP +I C C FC+ ++V + KG + D Y+ ++ I + V T Sbjct: 13 YPKKIAATCFFGGCNFSCPFCYNSQLV-NFKGEFM---DDNIFFEYLDKRKGIVDAVCIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P L+ + L + +K ++ S + +D PE++Q L +AG Y+A Sbjct: 69 GGEP-TLNEEYLTEFIKKIKN---------RSLLVKLDTNGSRPEVLQRLLDAGLLDYVA 118 Query: 211 IHANHPYE 218 + P E Sbjct: 119 MDVKAPLE 126 >gi|217967818|ref|YP_002353324.1| radical SAM enzyme, Cfr family [Dictyoglomus turgidum DSM 6724] gi|254807171|sp|B8E0X3|RLMN_DICTD RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|217336917|gb|ACK42710.1| radical SAM enzyme, Cfr family [Dictyoglomus turgidum DSM 6724] Length = 348 Score = 36.6 bits (83), Expect = 5.5, Method: Compositional matrix adjust. Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 30/206 (14%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 E ED G+N + L I H+ + + + + CP+ C+FC ++G ++ L + + Sbjct: 81 ELED--GENIETVL--ISHKNRNTVCVSVQVGCPIGCKFC-ATGLIGLKRN--LETHEII 133 Query: 133 AALAYIQE-----KSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 L IQE + +I V++ G G+PL V+K++R IK S+ Sbjct: 134 GQLMVIQEDLEKKEEKISNVVYMGMGEPL----ANYDNVIKSIRIIKEEWGFNIGSKHIT 189 Query: 187 VDPQRINPELIQCLKEAGK-PVYIAIHA------------NHPYEFSEEAIAAISRLANA 233 + I P++ Q +E K + I++HA N Y E +A Sbjct: 190 LSTIGIIPKIYQLAEENLKIRLAISLHASNNELRSKIIPINKEYPIEELLESAFYYAEKT 249 Query: 234 GIILLSQSVLLKGINDDPEILANLMR 259 G + + VL+K ND E L+R Sbjct: 250 GRRVTFEYVLIKNFNDRREDAKELVR 275 >gi|229550115|ref|ZP_04438840.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme [Enterococcus faecalis ATCC 29200] gi|229304819|gb|EEN70815.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme [Enterococcus faecalis ATCC 29200] Length = 321 Score = 36.6 bits (83), Expect = 5.6, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 60/148 (40%), Gaps = 11/148 (7%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 +K +R D + L L C + C +C + K L + D L I K I Sbjct: 1 MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEGIK 60 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204 +V TGG+PL+ + L IK ++ + +V + Q LKEAG Sbjct: 61 KVKLTGGEPLVRPN--------LLSLIKRIKQISGIEKVTLTTNGMKLAREAQGLKEAGL 112 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232 + I++ P EF E I + +L N Sbjct: 113 DGINISLDTLDPEEFRE--ITRVGQLRN 138 >gi|294780074|ref|ZP_06745450.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis PC1.1] gi|294452826|gb|EFG21252.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis PC1.1] gi|323480628|gb|ADX80067.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis 62] Length = 321 Score = 36.6 bits (83), Expect = 5.7, Method: Compositional matrix adjust. Identities = 39/148 (26%), Positives = 65/148 (43%), Gaps = 11/148 (7%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 +K +R D + L L C + C +C + K L + D L I K I Sbjct: 1 MKDAFNREIDYVRLSLTDRCDLRCTYCMPATGLCFLKKEQLLTDDEIIFLLRILAKEGIK 60 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204 +V TGG+PL+ L ++K ++ I ++ + + + ++ E Q LKEAG Sbjct: 61 KVKLTGGEPLV--RPNLLSLIKRIKQISGIEKVTLTT-----NGMKLARE-AQGLKEAGL 112 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLAN 232 + I++ P EF E I + +L N Sbjct: 113 DGINISLDTLDPEEFRE--ITRVGQLRN 138 >gi|302759444|ref|XP_002963145.1| hypothetical protein SELMODRAFT_79056 [Selaginella moellendorffii] gi|300170006|gb|EFJ36608.1| hypothetical protein SELMODRAFT_79056 [Selaginella moellendorffii] Length = 386 Score = 36.6 bits (83), Expect = 5.8, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 37/84 (44%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 ERED G + L R + + + L C + C +C E V G L S+D Sbjct: 49 EREDEAGPSVSDMLVDSFGRRHNYLRISLTERCNLRCHYCMPEEGVKLTPGAHLLSQDEI 108 Query: 133 AALAYIQEKSQIWEVIFTGGDPLI 156 ALA + + ++ TGG+P + Sbjct: 109 VALAKVFVGGGVDKIRLTGGEPTV 132 >gi|261403123|ref|YP_003247347.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus vulcanius M7] gi|261370116|gb|ACX72865.1| DEAD/DEAH box helicase domain protein [Methanocaldococcus vulcanius M7] Length = 783 Score = 36.6 bits (83), Expect = 5.9, Method: Compositional matrix adjust. Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 25/172 (14%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-------LSSKDTEAALAYIQEKSQIW 145 Y ++I +L+ VC + RE++ SQ TV LSS+ T++A + I + Sbjct: 262 YDEQIKYELIKVCSEALKLMHARELLESQGKTVFLNYINKLSSQRTKSAKSVIND----- 316 Query: 146 EVIFTGGDPLILS---HKRLQKVLKTLRYI----KHVQILRFHSRVPIVDP--QRINPEL 196 E I + L+ S H +L+KV++ ++ I K +I+ F V+ +N Sbjct: 317 EKIIKAVNLLLKSNTDHPKLEKVIEMVKKILKENKDERIIIFAQYRDTVEKIVNLLNQNE 376 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 I+ +K G+ A +E I AI + G +L+S SV +GI+ Sbjct: 377 IKAIKFIGQ----ASKEKGKGMTQKEQIKAIEKFKKEGSVLVSTSVSEEGID 424 >gi|18312199|ref|NP_558866.1| molybdenum cofactor biosynthesis protein (moaA) [Pyrobaculum aerophilum str. IM2] gi|24211994|sp|Q8ZYE5|MOAA_PYRAE RecName: Full=Probable molybdenum cofactor biosynthesis protein A gi|18159637|gb|AAL63048.1| molybdenum cofactor biosynthesis protein (moaA) [Pyrobaculum aerophilum str. IM2] Length = 310 Score = 36.6 bits (83), Expect = 6.0, Method: Compositional matrix adjust. Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 31/205 (15%) Query: 96 RILLKLLHV----CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R L KL +V C C FC E ++G L+++D + + + + + TG Sbjct: 8 RSLQKLRYVVNDECNYNCVFC-HFEGQSRRQGRYLTAEDY-GFVTSVFKSLGVADFKITG 65 Query: 152 GDPLILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208 G+PL+ L + KT Y V + + + ++ L+ AG K Sbjct: 66 GEPLLRGDIDLIVANIAKTGAY------------VTLTTNGYLLRKWVRKLQAAGLKRAN 113 Query: 209 IAIHANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 ++IH P ++S+ E + ++ + GI L +V+L+GIN D + + NL+ Sbjct: 114 VSIHTTDPEKYSKITGVPPSAFREVLRGLTEARDVGISLKLNAVVLRGINTDRDSVKNLV 173 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHF 283 + L ++ G S F Sbjct: 174 KLAASLGAALQFIELMPSGWGASVF 198 >gi|116751471|ref|YP_848158.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|205829911|sp|A0LQM1|RLMN_SYNFM RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|116700535|gb|ABK19723.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB] Length = 342 Score = 36.6 bits (83), Expect = 6.1, Method: Compositional matrix adjust. Identities = 40/182 (21%), Positives = 81/182 (44%), Gaps = 28/182 (15%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIFTG-GDPLILSH 159 C + C+FC + G ++ LS+ + + +Q +S+I ++F G G+PL Sbjct: 112 CALGCKFCLTGSL-GFKRN--LSAAEIVDQVCQVQRDLGSRSRITNIVFMGMGEPL---- 164 Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219 L VL+ +R I + F R + + P+L + +E+ + +++HA Sbjct: 165 ANLDSVLRAIRVIAEPNGMAFSHRRITLSTAGLVPQLRRLGRESPVNLAVSLHAAENELR 224 Query: 220 SEEAIAAISRLANAGIILLS--------------QSVLLKGINDDPEILANLMRTFVELR 265 +E + ++R +++ + + +LL GINDDP+ L++ +R Sbjct: 225 AE--LMPVNRTYPLEVLMAACREYPLPPRKRITFEYILLDGINDDPKQAKQLVKLLHGIR 282 Query: 266 IK 267 K Sbjct: 283 AK 284 >gi|238790753|ref|ZP_04634513.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia frederiksenii ATCC 33641] gi|238721151|gb|EEQ12831.1| Oxygen-independent coproporphyrinogen III oxidase [Yersinia frederiksenii ATCC 33641] Length = 457 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 33/133 (24%), Positives = 60/133 (45%), Gaps = 12/133 (9%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFCFRREMVGSQKG------TVLSSKDT 131 D N S + V RYP R L +H+ C C FC ++V Q+ VL + Sbjct: 35 DYNESAFQQAVKRYPQRPLSLYVHIPFCHKLCYFCGCNKLVTRQQHKADEYLVVLEKEIR 94 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 + A+ + Q+ ++ + GG P L+ ++ ++ LR ++ L + VDP+ Sbjct: 95 QRAVLFA--GRQVSQMHWGGGTPTYLNKTQITHLMNLLR--ENFDFLPGAEQSIEVDPRE 150 Query: 192 INPELIQCLKEAG 204 I +++ L+ G Sbjct: 151 IELDVLDHLRAEG 163 >gi|325294881|ref|YP_004281395.1| ribosomal RNA large subunit methyltransferase N [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065329|gb|ADY73336.1| Ribosomal RNA large subunit methyltransferase N [Desulfurobacterium thermolithotrophum DSM 11699] Length = 345 Score = 36.6 bits (83), Expect = 6.2, Method: Compositional matrix adjust. Identities = 43/176 (24%), Positives = 74/176 (42%), Gaps = 31/176 (17%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVIFTG-GDPLIL 157 CPV C+FC + ++ G + E YI E +I V+F G G+P + Sbjct: 110 CPVGCKFC-----LTAKDGFTRNLTAAEIVDQYIHVQRDVGEDKRISNVVFMGMGEPFL- 163 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA--- 213 + V K + + +L +R + + P + + KE K + I++HA Sbjct: 164 ---NFENVKKAVEIMTDKNMLDLSTRKITISTVGVVPGIDRMAKEMNKVKLAISLHATTD 220 Query: 214 ---------NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMR 259 N Y S E +AA+ R I ++ + V+L+G+ND E L++ Sbjct: 221 EVREKIVPLNRKYPIS-EIMAALRRYPADNIRRIMIEYVMLEGVNDSVEDAKRLVK 275 >gi|302796832|ref|XP_002980177.1| hypothetical protein SELMODRAFT_112186 [Selaginella moellendorffii] gi|300151793|gb|EFJ18437.1| hypothetical protein SELMODRAFT_112186 [Selaginella moellendorffii] Length = 386 Score = 36.6 bits (83), Expect = 6.4, Method: Compositional matrix adjust. Identities = 24/84 (28%), Positives = 37/84 (44%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 ERED G + L R + + + L C + C +C E V G L S+D Sbjct: 49 EREDEAGPSVSDMLVDSFGRRHNYLRISLTERCNLRCHYCMPEEGVKLTPGAHLLSQDEI 108 Query: 133 AALAYIQEKSQIWEVIFTGGDPLI 156 ALA + + ++ TGG+P + Sbjct: 109 VALAKVFVGGGVDKIRLTGGEPTV 132 >gi|269303256|gb|ACZ33356.1| putative oxygen-independent coproporphyrinogen III oxidase [Chlamydophila pneumoniae LPCoLN] Length = 373 Score = 36.2 bits (82), Expect = 6.8, Method: Compositional matrix adjust. Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 18/95 (18%) Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEAA 134 N SPL +H + C CR+C ++ E V V+ ++ Sbjct: 2 NGKSPLALYIH----------IPFCTKKCRYCSFYTIPYKSESVSLYCNAVI--QEGLRK 49 Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 LA IQE + V F GG P ++SH L+++LK L Sbjct: 50 LAPIQETHFVETVFFGGGTPSLVSHLDLKRILKEL 84 >gi|313888496|ref|ZP_07822163.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845525|gb|EFR32919.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei ACS-146-V-Sch2b] Length = 349 Score = 36.2 bits (82), Expect = 6.9, Method: Compositional matrix adjust. Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 15/107 (14%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAA----LAYIQEKSQIWEVIFTGGDPLILSHK 160 CP C FC +R++ G T +S+ D E L+Y + K + EV F GG + + Sbjct: 16 CPNDCVFCNQRKITGMS--TDISNSDVEDTILEYLSYFKRKDNV-EVAFYGGSFTAIPLE 72 Query: 161 RLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 + LK K V+ +R +R P I+ +++ LK+ G Sbjct: 73 EQSEFLKVAHSYKEKGLVKYIRLSTR-----PDAIDDRILENLKKYG 114 >gi|115372589|ref|ZP_01459896.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1] gi|310823867|ref|YP_003956225.1| radical sam domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115370310|gb|EAU69238.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1] gi|309396939|gb|ADO74398.1| Radical SAM domain protein [Stigmatella aurantiaca DW4/3-1] Length = 290 Score = 36.2 bits (82), Expect = 7.0, Method: Compositional matrix adjust. Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 11/137 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + ++ C C +C ++ M G T + EAAL + WE +GG+P + Sbjct: 8 VSWNIVGGCNYRCTYCVQKHMPGIGGPT---DEQLEAALTTLTALPGSWEFKISGGEPFL 64 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 L KRL +V K L H L + P+ R+ I+ E + ++H Sbjct: 65 L--KRLPEVAKRLATAGHKVSLLTNLSAPL----RVLATFIEAAGEQLRTFSCSLHREEV 118 Query: 217 YE--FSEEAIAAISRLA 231 E F E+A A + LA Sbjct: 119 EEAAFLEKAQAVQALLA 135 >gi|224107843|ref|XP_002314621.1| predicted protein [Populus trichocarpa] gi|222863661|gb|EEF00792.1| predicted protein [Populus trichocarpa] Length = 369 Score = 36.2 bits (82), Expect = 7.2, Method: Compositional matrix adjust. Identities = 44/176 (25%), Positives = 71/176 (40%), Gaps = 34/176 (19%) Query: 105 CPVYCRFCFR-REMVGSQKGTVLSSKD--------TEAALA---YIQEKSQIWEVIFTG- 151 C + C+FCF R+ GT++ K +A A E V+F G Sbjct: 109 CAMNCQFCFTGRQANIFHFGTLMGLKRHLSTAEIIEQAVFAQRLLTNEVGPFTNVVFMGM 168 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+PL + + V+K + H Q L F R V + P+L + L E+ +A+ Sbjct: 169 GEPL----QNIDSVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLKRFLHESN--CALAV 222 Query: 212 HANHPYEFSEEAIAAISRLANAGIIL---------------LSQSVLLKGINDDPE 252 N + I I+R N G++L L + V+L+G+ND + Sbjct: 223 SLNATTDEVRNWIMPINRKYNLGLLLQTLREELGLKNSYKVLFEYVMLEGVNDSDD 278 >gi|315302537|ref|ZP_07873372.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL F6-596] gi|313629099|gb|EFR97397.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL F6-596] Length = 333 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 52/211 (24%), Positives = 86/211 (40%), Gaps = 36/211 (17%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 G VH Y I + + C + C +C E + + SKD I K I +V Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVGFMEIMVKFGIKKV 65 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI------QCLK 201 TGG+PL+ + V+I+R +P ++ I + + LK Sbjct: 66 RITGGEPLLRTD--------------IVEIVRGLGAIPEIEDISITTNAMYLAKKAEALK 111 Query: 202 EAG-KPVYIAIHANHPYEFS--------EEAIAAISRLANAGIILLS-QSVLLKGINDDP 251 EAG V I++ + H F ++ + I + AG+ + VL+KG NDD Sbjct: 112 EAGLTRVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEAGLFPIKLNVVLIKGQNDDE 171 Query: 252 EILANLMRTFVELRIKPYYLHH-PDLAAGTS 281 + N ++ + I ++ + P AGTS Sbjct: 172 --ITNFLQFTKDKDINIRFIEYMPIGHAGTS 200 >gi|292486525|ref|YP_003529391.1| O2-independent coproporphyrinogen III oxidase [Erwinia amylovora CFBP1430] gi|292897762|ref|YP_003537131.1| oxygen-independent coproporphyrinogen III oxidase [Erwinia amylovora ATCC 49946] gi|291197610|emb|CBJ44704.1| oxygen-independent coproporphyrinogen III oxidase [Erwinia amylovora ATCC 49946] gi|291551938|emb|CBA18975.1| O2-independent coproporphyrinogen III oxidase [Erwinia amylovora CFBP1430] Length = 457 Score = 36.2 bits (82), Expect = 7.3, Method: Compositional matrix adjust. Identities = 54/238 (22%), Positives = 109/238 (45%), Gaps = 32/238 (13%) Query: 92 RYPDRILLKLLHV--CPVYCRFCFRREMVGSQK---GTVLSSKDTE-AALAYIQEKSQIW 145 RYP R L LH+ C C FC + V Q+ L++ E AA A + ++ + Sbjct: 47 RYPQRPLSLYLHIPFCHRLCYFCGCNKQVTRQQHKADDYLAALMLEIAARARLFQQRTVS 106 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204 ++ + GG P L+ +++++++ LR +H I VDP+ I +++ L+ G Sbjct: 107 QMHWGGGTPTFLNKQQIRRLMACLR--QHFHISDTAEISIEVDPREIELDVLDHLRAEGF 164 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGII--LLSQSVLLKGINDD-----------P 251 + + + +F+++ ++R+ + I L++++ L ++ + P Sbjct: 165 NRLSMGVQ-----DFNKQVQEKVNRVQDEKTIFALVARARQLGFVSTNIDLIYGLPAQTP 219 Query: 252 EILANLMRTFVEL---RIKPY-YLHHPDLAAGTSHFR-LTIEEGQKIVASLKEKISGL 304 A ++ VEL R+ + Y H P L A R + + Q+ +A L++ I+ L Sbjct: 220 ASFAFTLQKVVELDPDRLSIFNYAHMPALFAAQRKIREAELPDAQQKLAILQQTIATL 277 >gi|226939284|ref|YP_002794355.1| coproporphyrinogen III oxidase [Laribacter hongkongensis HLHK9] gi|226714208|gb|ACO73346.1| HemN [Laribacter hongkongensis HLHK9] Length = 470 Score = 36.2 bits (82), Expect = 7.5, Method: Compositional matrix adjust. Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 7/105 (6%) Query: 105 CPVYCRFCFRREMVGSQKG---TVLSSKDTEAAL--AYIQEKSQIWEVIFTGGDPLILSH 159 C C +C +++ K T L + E AL Y+Q Q+ ++ F GG P LS Sbjct: 74 CNTVCYYCACNKIITKDKSRADTYLDYLERELALHAEYLQGHPQLAQLHFGGGTPTFLSD 133 Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 ++ ++++ + +H Q++ +DP+++ + ++ L G Sbjct: 134 AQMTRLMQAIG--RHFQLVPHGEYSIEIDPRKVTADNVKHLASLG 176 >gi|297616758|ref|YP_003701917.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus lipocalidus DSM 12680] gi|297144595|gb|ADI01352.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus lipocalidus DSM 12680] Length = 326 Score = 36.2 bits (82), Expect = 7.6, Method: Compositional matrix adjust. Identities = 38/156 (24%), Positives = 75/156 (48%), Gaps = 18/156 (11%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C + CR+C V + + + S + + + + I +V TGG+PL+ + L + Sbjct: 20 CNLRCRYCMPEAGVELKPHSEILSLEEIHRIIKVGTRVGIRKVRLTGGEPLV--RRNLSR 77 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFS--- 220 +++ +R I + V I + PE+ LKEAG + +++ +P ++S Sbjct: 78 LVQMIRTIDLI------DDVAITTNGLLFPEMAGELKEAGLHRLNVSLDTMNPEKYSFIT 131 Query: 221 -----EEAIAAI-SRLANAGIILLSQSVLLKGINDD 250 ++A+ AI + LA + +V+++GINDD Sbjct: 132 RNGSLKQALRAIETALALEFHPVKINTVVMRGINDD 167 >gi|160902149|ref|YP_001567730.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95] gi|160359793|gb|ABX31407.1| Radical SAM domain protein [Petrotoga mobilis SJ95] Length = 464 Score = 36.2 bits (82), Expect = 7.7, Method: Compositional matrix adjust. Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 18/136 (13%) Query: 52 PNDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYP-DRILLKLLHVCPVYC 109 P R+F KE E N++ E +++ N L+ V RY +LL++ C + C Sbjct: 23 PKKVYNRRFNAIKEFEKNLINERKKNYTEKNTSEELRTNVLRYGLQELLLEVTQNCNLQC 82 Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE------------VIFTGGDPLIL 157 R+C E+ + L + + + A+ I + + F GG+PL+ Sbjct: 83 RYCIYSEVYPMYRNNTLRAMNEDIAIKAIDLYFSLLREGISYNPYREPTIGFYGGEPLL- 141 Query: 158 SHKRLQKVLKTLRYIK 173 + + K ++Y+K Sbjct: 142 ---NFELIKKCIKYVK 154 >gi|261409709|ref|YP_003245950.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. Y412MC10] gi|261286172|gb|ACX68143.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. Y412MC10] Length = 334 Score = 36.2 bits (82), Expect = 7.9, Method: Compositional matrix adjust. Identities = 46/197 (23%), Positives = 81/197 (41%), Gaps = 34/197 (17%) Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 PLK R D I + + C + C +C E + Q + S + A++ + + Sbjct: 4 PLKDSFGRVHDYIRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIASIMRVLAPMGV 63 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 +V TGG+PL+ K L+ ++ + I+ VQ + + ++ P + LKEAG Sbjct: 64 SKVRLTGGEPLV--RKDLETLVHQIASIEGVQDISLTTNGIML------PSKARLLKEAG 115 Query: 205 -KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS--------------QSVLLKGIND 249 + I++ + EE A I+R +L VL+KG N+ Sbjct: 116 LTRINISLDS-----LQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNE 170 Query: 250 DPEILANLMRTFVELRI 266 D +R F+ L + Sbjct: 171 DE------IRDFIALTL 181 >gi|325959672|ref|YP_004291138.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21] gi|325331104|gb|ADZ10166.1| Radical SAM domain protein [Methanobacterium sp. AL-21] Length = 500 Score = 36.2 bits (82), Expect = 8.1, Method: Compositional matrix adjust. Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 29/196 (14%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHV---CPVYCRFCFRREMVGSQKGTVLSSK 129 E I D + GI + +L L+ V C + C CF V S+K S + Sbjct: 69 ENPQTIADTDCPNNCGICDEHESHTVLGLIDVTNRCNLKCPVCFANAAV-SKKLYEPSYE 127 Query: 130 DTEAALAYIQEKSQIWE--VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVP 185 + L ++ + + + GG+P + K L ++K + H QI R+ Sbjct: 128 EIRTMLRNLRNNRPVPTPAIQYAGGEPTV--RKDLVDLIKLAKEEGFSHTQIATNGVRLA 185 Query: 186 IVDPQRINPELIQCLKEAG-KPVYIAIHA--NHPY------EFSEEAIAAI--SRLANAG 234 + P L Q LK+AG VY+ PY + I AI R AN G Sbjct: 186 RL------PSLAQELKDAGLNTVYLQFDGVTEEPYLEIRQKDLLATKIKAIENCRKANLG 239 Query: 235 IILLSQSVLLKGINDD 250 I+L+ LLKGINDD Sbjct: 240 IVLVP--TLLKGINDD 253 >gi|282857182|ref|ZP_06266426.1| 23S rRNA m2A2503 methyltransferase [Pyramidobacter piscolens W5455] gi|282584968|gb|EFB90292.1| 23S rRNA m2A2503 methyltransferase [Pyramidobacter piscolens W5455] Length = 365 Score = 35.8 bits (81), Expect = 8.9, Method: Compositional matrix adjust. Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 33/183 (18%) Query: 105 CPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLIL 157 CP+ C FC F+R + + + ++ +++ I V+F G G+PL+ Sbjct: 135 CPLRCEFCATGQQGFKRNLSAGEIVSHFAAMESDVG-------HDINNVVFMGMGEPLL- 186 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 + V+K +R ++ R + I PE I+ L + G +Y+ + + P Sbjct: 187 ---NYENVVKAVRMFLEPKMRGLSVRHVTISTSGI-PEGIRRLADEGLDIYLCLSLHAPN 242 Query: 218 EFSEEAI----------AAISRL----ANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 I A S L G+ L + V+LK +ND P+ L F Sbjct: 243 NELRSRIMPVNERFPLGAVFSALEYWQKKTGVRLTIEYVMLKNVNDTPDCAYELATLFSN 302 Query: 264 LRI 266 L++ Sbjct: 303 LQV 305 Searching..................................................done Results from round 2 >gi|75423266|sp|Q9XBQ8|KAMA_CLOSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName: Full=KAM gi|5410603|gb|AAD43134.1|AF159146_1 L-lysine 2,3-aminomutase [Clostridium subterminale] Length = 416 Score = 518 bits (1334), Expect = e-145, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 209/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + ++L + KE+ + + + +A+TP +LI+P++PNDP+ +Q Sbjct: 22 WQVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRMAITPYYLSLIDPNDPNDPVRKQA 80 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP ELN + EDP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G Sbjct: 81 IPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQ 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + + A+ YI+ Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R Sbjct: 141 SDDS-MPMERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI 199 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AG+ L +Q Sbjct: 200 GSRTPVVLPQRITPELVNMLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQ 258 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 259 SVLLRGVNDCVHVMKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGH 318 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK + + + + + + ++ Y Sbjct: 319 TSGYCVPTFVVDAPGGGGKTPVMPNYVISQSHDKVILRNFEGVITTY 365 >gi|158319469|ref|YP_001511976.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii OhILAs] gi|158139668|gb|ABW17980.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus oremlandii OhILAs] Length = 416 Score = 514 bits (1325), Expect = e-144, Method: Composition-based stats. Identities = 121/347 (34%), Positives = 211/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ +T+ +DL + E+ IKE + +TP A+L++ +PN P+ +Q Sbjct: 23 WQVKNR-ITNVEDLKKVINLTDEEEKGIKECLKTLRMGITPYYASLMDKDDPNCPVRKQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL+ + +DP+ ++ SP+ G+ HRYP+R+LL + +C +YCR C RR G Sbjct: 82 VPIMTELHKSDADMDDPLHEDADSPVPGLTHRYPNRVLLLITDMCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q T + +AA+ YI+ ++ +V+ +GGD L++S ++L+ ++ LR I+HV+I+R Sbjct: 141 QNDTAMPMDRIDAAIEYIRRTPEVRDVLLSGGDCLLVSDEKLEYIISKLREIEHVEIIRL 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL+ LK+ P+++ H NHP E +EE A++ LA+AGI L +Q Sbjct: 201 GSRTPVVMPQRITPELVGMLKKY-HPIWLNTHFNHPKELTEETKRALTLLADAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND I+ +L+ V+ R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 260 SVLLRGVNDCVHIMRDLVHGLVKNRVRPYYIYQCDLSMGIEHFRTPVSKGIEIIEGLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK+ + + + + + ++ ++ Y Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPNYVVSQSHNKVILRNYEGVITTY 366 >gi|254781065|ref|YP_003065478.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus str. psy62] gi|254040742|gb|ACT57538.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter asiaticus str. psy62] Length = 352 Score = 511 bits (1318), Expect = e-143, Method: Composition-based stats. Identities = 352/352 (100%), Positives = 352/352 (100%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF Sbjct: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS Sbjct: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF Sbjct: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ Sbjct: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK Sbjct: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS Sbjct: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 >gi|257470355|ref|ZP_05634446.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185] gi|317064564|ref|ZP_07929049.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185] gi|313690240|gb|EFS27075.1| lysine 2,3-aminomutase [Fusobacterium ulcerans ATCC 49185] Length = 415 Score = 511 bits (1317), Expect = e-143, Method: Composition-based stats. Identities = 118/347 (34%), Positives = 203/347 (58%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + S +DL + E+ + +K+ +A+TP +L++ ++PN P+ +Q Sbjct: 24 WQVKNR-IESLEDLKKYITLSAEEEEGVKKTLETLRMAVTPYYFSLMDNNDPNCPVRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G+ Sbjct: 83 IPSIKEIHQAEADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGA 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + A+ YI + Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL++ LK+ P+++ H NHP E + E+ A LANAGI L +Q Sbjct: 202 GSRTPVVLPQRITPELVEMLKKY-HPIWLNTHFNHPKEVTPESKKACELLANAGIPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 SVLLRGINDCVHVMKKLVHELVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + + + ++ Y Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQAPHKVVLRNFEGVITTY 367 >gi|167752794|ref|ZP_02424921.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216] gi|167659863|gb|EDS03993.1| hypothetical protein ALIPUT_01055 [Alistipes putredinis DSM 17216] Length = 413 Score = 511 bits (1316), Expect = e-143, Method: Composition-based stats. Identities = 124/347 (35%), Positives = 206/347 (59%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + + +L + E+ + I+E +A+TP LI+P NP+ PI +Q Sbjct: 21 WQVKNR-IETVDELKKYIKLTAEEEEGIRESLKTLRMAITPYYLTLIDPENPHCPIRKQA 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EEL P + EDP+ +++ SP+ G+ HRYPDR+L + +C +YCR C RR G Sbjct: 80 IPTVEELKRSPADLEDPLHEDSDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 138 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q K + + YI Q+ +V+ +GGD L++S ++L+ ++ LR I HV+I+R Sbjct: 139 QHDCATPEKQIDDCIDYIARTPQVRDVLLSGGDALLVSDEKLEYIISRLRAIPHVEIIRI 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL+ LK+ P+++ H NHP E + E+ A +RLA+AGI L +Q Sbjct: 199 GSRTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPNEVTPESKQACARLADAGIPLGNQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND I+ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+ Sbjct: 258 SVLLRGVNDCTHIMKKLVHELVKMRVRPYYIYICDLSLGIGHFRTPVSKGIEIIENLRGH 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK+ + + + + ++ ++ Y Sbjct: 318 TSGYAVPTFVVDAPGGGGKIPVMPNYVISQAPNRVVLRNYEGVITTY 364 >gi|228469409|ref|ZP_04054423.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3] gi|228309093|gb|EEK17723.1| L-lysine 2,3-aminomutase [Porphyromonas uenonis 60-3] Length = 421 Score = 510 bits (1314), Expect = e-142, Method: Composition-based stats. Identities = 128/351 (36%), Positives = 214/351 (60%), Gaps = 3/351 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + L + E+ + ++E +A+TP +LI+P++PNDP+ +Q Sbjct: 23 WQVRNR-IETLDQLKKYIKLTPEEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQS 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL++ PE++ DP+ ++ SP+ G+ HRYPDR+L + +C +YCR C RR G Sbjct: 82 IPTINELHVSPEDQLDPLSEDEDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 QK + E + YI++ ++ +V+ +GGD L++S K L+ +++ LR I HV+I+R Sbjct: 141 QKDAASPKERIEKCIEYIEQTPEVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL+Q L + P+++ H NHP E + E+ A R+ANAGI L +Q Sbjct: 201 GSRTPVVCPQRITPELVQMLSKY-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND P I+ +L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+ Sbjct: 260 SVLLRGINDCPSIMKHLVHELVKMRVRPYYIYVCDLSRGISHFRTPVSKGIEIIEALRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 SG P +++D PGG GK + + + + ++ ++ Y S Sbjct: 320 TSGYAVPTFVVDAPGGGGKTPVMPNYVISQSPHRVVLRNYEGVITTYTEPS 370 >gi|310658686|ref|YP_003936407.1| l-lysine 2,3-aminomutase [Clostridium sticklandii DSM 519] gi|308825464|emb|CBH21502.1| l-lysine 2,3-aminomutase [Clostridium sticklandii] Length = 414 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 126/347 (36%), Positives = 211/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + ++L + E+ + +K + +A+TP +LI+ NPNDP+ +Q Sbjct: 21 WQVRNR-IETVEELKKYIPLTPEEEEGVKRCLDTLRMAITPYYLSLIDVENPNDPVRKQA 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL+ ++EDP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G Sbjct: 80 VPLSLELHRAASDQEDPLHEDGDSPVPGLTHRYPDRVLLLMTDQCSMYCRHCTRRRFAG- 138 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + + +K +AA+ YI+ Q+ +V+ +GGD L++S ++L+ +K LR I HV+++R Sbjct: 139 QTDSAVDTKQIDAAIEYIKNTPQVRDVLLSGGDALLISDEKLEYTIKRLREIPHVEVIRI 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SRVP+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AGI L +Q Sbjct: 199 GSRVPVVMPQRITPELVSMLKKY-HPVWLNTHFNHPNEITEESKRACELLADAGIPLGNQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL G+ND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 258 SVLLAGVNDCMHVMKKLVNDLVKIRVRPYYIYQCDLSVGIEHFRTPVAKGIEIIEGLRGH 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK + + + + + + ++ Y Sbjct: 318 TSGYCVPTFVVDAPGGGGKTPVMPNYVISQNHNKVILRNFEGVITTY 364 >gi|331004173|ref|ZP_08327653.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str. F0167] gi|330411583|gb|EGG90993.1| L-lysine 2,3-aminomutase [Lachnospiraceae oral taxon 107 str. F0167] Length = 418 Score = 509 bits (1312), Expect = e-142, Method: Composition-based stats. Identities = 122/347 (35%), Positives = 212/347 (61%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLR++ +T+ + L + +++ + +K + +A+TP +LI+ + +DP+ +Q Sbjct: 23 WQLRNR-ITNVESLKKYIKLTEKEEEGVKRCLENLRMAITPYYLSLIDLEDEDDPVRKQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL+I + DP+ ++ SP+ G+ HRYPDR+L + C +YCR C RR G Sbjct: 82 IPTVSELHIADADLADPLHEDTDSPVHGLTHRYPDRVLFLVTDQCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q T + + +A + YI+ ++ +V+ +GGD L++S+++L+ ++ LR I+HV+I+R Sbjct: 141 QNDTSVPTSQVDACIDYIRRHPEVRDVLLSGGDALLISNEKLEYIISELRKIEHVEIVRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL+ LK+ PV++ H NHP E ++E+ A +RLA+AGI L +Q Sbjct: 201 GSRTPVVMPQRITPELVNMLKKY-HPVWLNTHFNHPSEITKESAEACARLADAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL G+ND I+ +L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 260 TVLLAGVNDCVHIMTDLVHELVKIRVRPYYIYQCDLSQGLEHFRTPVSKGIEIIEGLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK + + + G + ++ ++ Y Sbjct: 320 TSGYCVPTFVVDAPGGGGKTPVMPNYVISQSPGKVILRNYEGVITTY 366 >gi|313886286|ref|ZP_07820012.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I] gi|332299776|ref|YP_004441697.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707] gi|312924231|gb|EFR35014.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica PR426713P-I] gi|332176839|gb|AEE12529.1| lysine-2,3-aminomutase [Porphyromonas asaccharolytica DSM 20707] Length = 421 Score = 508 bits (1309), Expect = e-142, Method: Composition-based stats. Identities = 127/347 (36%), Positives = 213/347 (61%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + L + E+ + ++E +A+TP +LI+P++PNDP+ +Q Sbjct: 23 WQVRNR-IETLDQLKKYIKLTPEEEEGVRESLKTIRMAITPYYLSLIDPNDPNDPVRKQS 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL++ PE++ DP+ ++ SP+ G+ HRYPDR+L + +C +YCR C RR G Sbjct: 82 IPTINELHVSPEDQLDPLSEDEDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 QK + E + YI++ ++ +V+ +GGD L++S K L+ +++ LR I HV+I+R Sbjct: 141 QKDAASPKERIEKCIEYIEQTPEVRDVLLSGGDALMVSDKMLEYIIQRLRAIPHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL+Q L + P+++ H NHP E + E+ A R+ANAGI L +Q Sbjct: 201 GSRTPVVCPQRITPELVQMLSKY-HPIWLNTHFNHPNEVTRESREACERMANAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND P I+ +L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+ Sbjct: 260 SVLLRGINDCPSIMMHLVHELVKMRVRPYYIYVCDLSQGISHFRTPVSKGIEIIEALRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK+ + + + ++ ++ Y Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPTYVISQSPHRVVLRNYEGVITTY 366 >gi|225734347|pdb|2A5H|A Chain A, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3- Aminomutase From Clostridium Subterminale Sb4, With Michaelis Analog (L-Alpha-Lysine External Aldimine Form Of Pyridoxal-5'-Phosphate). gi|225734348|pdb|2A5H|B Chain B, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3- Aminomutase From Clostridium Subterminale Sb4, With Michaelis Analog (L-Alpha-Lysine External Aldimine Form Of Pyridoxal-5'-Phosphate). gi|225734349|pdb|2A5H|C Chain C, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3- Aminomutase From Clostridium Subterminale Sb4, With Michaelis Analog (L-Alpha-Lysine External Aldimine Form Of Pyridoxal-5'-Phosphate). gi|225734350|pdb|2A5H|D Chain D, 2.1 Angstrom X-Ray Crystal Structure Of Lysine-2,3- Aminomutase From Clostridium Subterminale Sb4, With Michaelis Analog (L-Alpha-Lysine External Aldimine Form Of Pyridoxal-5'-Phosphate) Length = 416 Score = 508 bits (1308), Expect = e-142, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 204/347 (58%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + ++L + KE+ + + + A+TP +LI+P++PNDP+ +Q Sbjct: 22 WQVRNR-IETVEELKKYIPLTKEEEEGVAQCVKSLRXAITPYYLSLIDPNDPNDPVRKQA 80 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP ELN + EDP+ ++ SP+ G+ HRYPDR+LL + C YCR C RR G Sbjct: 81 IPTALELNKAAADLEDPLHEDTDSPVPGLTHRYPDRVLLLITDXCSXYCRHCTRRRFAGQ 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + A+ YI+ Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R Sbjct: 141 SDDSXP-XERIDKAIDYIRNTPQVRDVLLSGGDALLVSDETLEYIIAKLREIPHVEIVRI 199 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL+ LK+ PV++ H NHP E +EE+ A LA+AG+ L +Q Sbjct: 200 GSRTPVVLPQRITPELVNXLKKY-HPVWLNTHFNHPNEITEESTRACQLLADAGVPLGNQ 258 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND + L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 259 SVLLRGVNDCVHVXKELVNKLVKIRVRPYYIYQCDLSLGLEHFRTPVSKGIEIIEGLRGH 318 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK + + + + + + ++ Y Sbjct: 319 TSGYCVPTFVVDAPGGGGKTPVXPNYVISQSHDKVILRNFEGVITTY 365 >gi|229496618|ref|ZP_04390332.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406] gi|229316515|gb|EEN82434.1| L-lysine 2,3-aminomutase [Porphyromonas endodontalis ATCC 35406] Length = 418 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 211/351 (60%), Gaps = 3/351 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + + DL + E+ + ++E +A+TP +LI+P++PNDP+ +Q Sbjct: 23 WQVKNR-IETLDDLKKYVTLTPEEEEGVRESLKSLRMAITPYYLSLIDPNDPNDPVRKQS 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL I E++ DP+ ++ SP G+ HRYPDR+L + +C +YCR C RR G Sbjct: 82 VPTANELIISEEDQLDPLSEDEDSPTPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 QK + + A+ YI+ ++ +V+ +GGD L++S ++ +L+ LR I HV+I+RF Sbjct: 141 QKDAASPRERIDKAIEYIERTPEVRDVLLSGGDALMVSDSMIEYILQRLRAIDHVEIIRF 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL++ LK+ P+++ H NHP E + E+ A RLANAG+ L +Q Sbjct: 201 GSRTPVVLPQRITPELVEILKKY-HPIWLNTHFNHPNEITAESKEACERLANAGVPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GIND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+ Sbjct: 260 TVLLRGINDCTYVMKKLVHELVKIRVRPYYIYVCDLSRGIGHFRTPVSKGIEIIENLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 SG P +++D PGG GK+ + + I + ++ ++ Y + Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPNYIVSQAPNRVVLRNYEGVLTTYTEPA 370 >gi|257463416|ref|ZP_05627811.1| lysine 2,3-aminomutase [Fusobacterium sp. D12] gi|317060981|ref|ZP_07925466.1| lysine 2,3-aminomutase [Fusobacterium sp. D12] gi|313686657|gb|EFS23492.1| lysine 2,3-aminomutase [Fusobacterium sp. D12] Length = 419 Score = 506 bits (1304), Expect = e-141, Method: Composition-based stats. Identities = 115/347 (33%), Positives = 199/347 (57%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + +DL + +E+ + + + +A+TP +LI+ +PN P+ +Q Sbjct: 24 WQVRNR-IETLEDLKQFANLSEEESEGVVKTLETLRMAITPYYFSLIDLEDPNCPVRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E++ + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G Sbjct: 83 IPTVQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQ 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + + + YI + ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R Sbjct: 143 SDDS-MPMERIDKCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKRACEMLADAGVPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND ++ LM V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 SVLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + + + ++ Y Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHKVILRNFEGVITTY 367 >gi|226315087|ref|YP_002774983.1| lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599] gi|226098037|dbj|BAH46479.1| probable lysine 2,3-aminomutase [Brevibacillus brevis NBRC 100599] Length = 454 Score = 505 bits (1302), Expect = e-141, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 202/350 (57%), Gaps = 3/350 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + E+ + ++ + + +TP A+L++P +P+DP+ Q Sbjct: 30 WQLTH-TIKTVDDLKQVINLTPEEEEGVRISTQTIPLNITPYYAHLMDPDDPSDPVRMQS 88 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 89 VPLSSEMVRTKYDMEDPLHEDTDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 147 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +A + YI+ + ++ +V+ +GGD L+++ + L+ ++ +LR I HV+I+R Sbjct: 148 QIGMGVPKKQLDACIDYIRSRPEVRDVLLSGGDGLLINDRVLEYIISSLRDIPHVEIIRI 207 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L LK+ PV++ H NHP E + EA A LANAG+ L +Q Sbjct: 208 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNHPKEITPEAKLACEMLANAGVPLGNQ 266 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND + L++ V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 267 AVILAGINDCANTMKKLVQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGIEIIEHLRGH 326 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG P +++D P G GK+ + + I + + + ++ YP Sbjct: 327 TSGYAVPTFVVDAPHGGGKIPVSPNYIISQASDKVVLRNFEGVITSYPEP 376 >gi|257451624|ref|ZP_05616923.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R] gi|257466940|ref|ZP_05631251.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563] gi|315918082|ref|ZP_07914322.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563] gi|317058188|ref|ZP_07922673.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R] gi|313683864|gb|EFS20699.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_5R] gi|313691957|gb|EFS28792.1| lysine 2,3-aminomutase [Fusobacterium gonidiaformans ATCC 25563] Length = 419 Score = 505 bits (1301), Expect = e-141, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 197/347 (56%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + DL + E+ + + + +A+TP +LI+ +PN P+ +Q Sbjct: 24 WQVRNR-IETLDDLKQFANLSDEESEGVVKTLETLRMAITPYYFSLIDLDDPNCPVRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E++ + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G Sbjct: 83 IPTIQEIHQSKADLLDPLHEDADSPCPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGQ 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + + + YI + ++ +V+ +GGD L++S + L+ +++ LR I HV+I+R Sbjct: 143 SDDS-MPMERIDRCIEYIAKTPEVRDVLLSGGDALLVSDEFLESIIQKLRAIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LANAG+ L +Q Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPKEVTPEAKKACEMLANAGVPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND ++ LM V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 SVLLRGVNDSVPVMKKLMHELVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + + + ++ Y Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHKVILRNFEGVITTY 367 >gi|239617353|ref|YP_002940675.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF 19.5.1] gi|239506184|gb|ACR79671.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF 19.5.1] Length = 426 Score = 505 bits (1300), Expect = e-141, Method: Composition-based stats. Identities = 132/347 (38%), Positives = 211/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ +T+ + L I KE+ + IK +A+TP A L++P NP PI RQ Sbjct: 23 WQVRNR-ITTVEQLKQVINITKEEEEGIKNCLKTLRMAITPYYATLMDPDNPKCPIRRQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P ++EL + + DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G Sbjct: 82 VPTEKELIVDRWDMLDPLHEDEDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + ++ + A+ YI+E Q+ +V+ +GGD L++ L+ +LK LR I HV+I+R Sbjct: 141 QLDKPRTKREIDKAIEYIRETPQVRDVLLSGGDALLVDDSVLEYILKELRKIPHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL++ LK+ P+++ H NHP E + E+ A LANAGI L +Q Sbjct: 201 GSRTPVVLPQRITPELVKMLKKY-HPIWLNTHFNHPKEITPESAKACETLANAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND P I+ L+ V++R++PYY++ DL+ G HFR +I +G I+ SL Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIAIMESLIGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK+++ + + + + ++ ++ Y Sbjct: 320 TSGFCVPTFVVDAPGGGGKIRVMPQYVVSQSDRTVVLRNYEGVITTY 366 >gi|188586500|ref|YP_001918045.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351187|gb|ACB85457.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 420 Score = 503 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 125/347 (36%), Positives = 205/347 (59%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL ++ +T + L + +E+ + IK+ +A+TP A+L++ +P+ PI R Sbjct: 25 WQLNNR-ITDVESLKEIINLTEEEEEGIKQTLKTIRMAITPYYASLMDKDDPSCPIRRHA 83 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P ELN + EDP+ +++ SP++GI HRYPDR+L + C +YCR C RR + GS Sbjct: 84 VPSSLELNFSEFDLEDPLSEDSDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRLAGS 143 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + A+ YI+ Q+ +V+ +GGD L++S +RL+ +L L I+HV+I+R Sbjct: 144 -TDKAAPIEVIDKAIDYIKNTPQVRDVLISGGDGLLISDERLEYILNELYKIEHVEIVRI 202 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI LI LK+ P+++ H NHP E + EA A+++LA+AGI L +Q Sbjct: 203 GTRAPVVLPQRITDNLISILKKY-HPIWLNTHFNHPKEITSEAKEALAKLADAGIPLGNQ 261 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND P + L+ V+ R++PYY++ DL+ G HFR ++ G +I+ SL+ Sbjct: 262 SVLLRGINDCPVTMKELVHELVKNRVRPYYIYQCDLSQGIEHFRTSVSAGLEIIESLRGH 321 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + S + ++ ++ Y Sbjct: 322 TSGYAVPTFVVDAPGGGGKTPVMPQYLISQSPDSVVLRNYEGVISKY 368 >gi|150392234|ref|YP_001322283.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus metalliredigens QYMF] gi|149952096|gb|ABR50624.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus metalliredigens QYMF] Length = 414 Score = 503 bits (1297), Expect = e-140, Method: Composition-based stats. Identities = 123/352 (34%), Positives = 211/352 (59%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + + +DL + ++ + I+E + +TP A+L++ + N P+ Q Sbjct: 23 WQVKNR-IATVEDLKKVIDLTSQEEEAIEECLQTLRMGITPYYASLMDKEDSNCPVRMQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL++ + +DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G Sbjct: 82 VPIMSELSMGSADMDDPLHEDVDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q+ + + +AA+ YI + QI +V+ +GGD L+ S +RL+ ++ LR I+HV+I+R Sbjct: 141 QQDSGMPLDRIDAAIDYIAKTPQIRDVLLSGGDCLLASDERLEYIISKLRAIEHVEIIRL 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SRVP+V PQRI P L+ LK+ P+++ H NH E ++E+ AI LANAGI L +Q Sbjct: 201 GSRVPVVMPQRITPSLVNMLKKY-HPIWLNTHFNHSKEITKESKEAIELLANAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKG+ND I+ +L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 260 SVLLKGVNDCVHIMRDLVHDMVKMRVRPYYIYQCDLSRGIEHFRTPVAKGIEIIEGLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + N + ++ ++ Y S Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPNYVLSQSNNKVVLRNYEGVITTYTEPES 371 >gi|256846428|ref|ZP_05551885.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2] gi|256718197|gb|EEU31753.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_36A2] Length = 425 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 120/347 (34%), Positives = 200/347 (57%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q Sbjct: 24 WQVKNR-LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS Sbjct: 83 IPTIQEIHQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 TVLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + G + + ++ Y Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367 >gi|34763498|ref|ZP_00144440.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|237741285|ref|ZP_04571766.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13] gi|294784507|ref|ZP_06749796.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27] gi|27886827|gb|EAA23958.1| LYSINE 2,3-AMINOMUTASE [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|229430817|gb|EEO41029.1| lysine 2,3-aminomutase [Fusobacterium sp. 4_1_13] gi|294487723|gb|EFG35082.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 3_1_27] Length = 425 Score = 503 bits (1295), Expect = e-140, Method: Composition-based stats. Identities = 120/347 (34%), Positives = 200/347 (57%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q Sbjct: 24 WQVKNR-LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS Sbjct: 83 IPTIQEIHQSAADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLRAIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKRACEMLADAGIPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 TVLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + G + + ++ Y Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367 >gi|294500786|ref|YP_003564486.1| KamA family protein [Bacillus megaterium QM B1551] gi|294350723|gb|ADE71052.1| KamA family protein [Bacillus megaterium QM B1551] Length = 470 Score = 502 bits (1293), Expect = e-140, Method: Composition-based stats. Identities = 119/352 (33%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + ++ + + +TP A+L+NP +P P+ Q Sbjct: 31 WQLTN-TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPVGKELHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI + ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L L++ PV++ H N E +EE A L +AG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + I + + ++ YP S Sbjct: 328 TSGYAVPTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379 >gi|237743425|ref|ZP_04573906.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1] gi|260494967|ref|ZP_05815096.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33] gi|229433204|gb|EEO43416.1| lysine 2,3-aminomutase [Fusobacterium sp. 7_1] gi|260197410|gb|EEW94928.1| lysine 2,3-aminomutase [Fusobacterium sp. 3_1_33] Length = 425 Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 119/347 (34%), Positives = 198/347 (57%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + DL + E+ + +KE +A+TP +LI+ + PI +Q Sbjct: 24 WQVKNR-IEKLDDLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS Sbjct: 83 IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + A+ YI + Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 TVLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + + + ++ Y Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367 >gi|34540806|ref|NP_905285.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83] gi|188995030|ref|YP_001929282.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277] gi|34397120|gb|AAQ66184.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis W83] gi|188594710|dbj|BAG33685.1| L-lysine 2,3-aminomutase [Porphyromonas gingivalis ATCC 33277] Length = 416 Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 128/347 (36%), Positives = 207/347 (59%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ + + L + E+ + +KE +A+TP +LI+P NPN PI +Q Sbjct: 23 WQVLNR-IETLDQLKKYVTLTAEEEEGVKESLKVLRMAITPYYLSLIDPENPNCPIRKQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +EL PE++ DP+ ++ SP+ G+ HRYPDR+L + C +YCR C RR G Sbjct: 82 IPTHQELVRAPEDQVDPLSEDEDSPVPGLTHRYPDRVLFLITDKCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 QK S+ + + YI + +V+ +GGD L++S +RL+ +LK LR I HV+I+R Sbjct: 141 QKDASSPSERIDRCIDYIANTPTVRDVLLSGGDALLVSDERLEYILKRLREIPHVEIVRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI P+L+ LK+ PV++ H NHP E +EEA+ A R+ANAGI L +Q Sbjct: 201 GSRTPVVLPQRITPQLVDMLKKY-HPVWLNTHFNHPNEVTEEAVEACERMANAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GIND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+ Sbjct: 260 TVLLRGINDCTHVMKRLVHLLVKMRVRPYYIYVCDLSLGIGHFRTPVSKGIEIIENLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK+ + + + + ++ ++ Y Sbjct: 320 TSGYAVPTFVVDAPGGGGKIPVMPNYVVSQSPRHVVLRNYEGVITTY 366 >gi|326391509|ref|ZP_08213042.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter ethanolicus JW 200] gi|325992438|gb|EGD50897.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter ethanolicus JW 200] Length = 423 Score = 501 bits (1292), Expect = e-140, Method: Composition-based stats. Identities = 127/347 (36%), Positives = 212/347 (61%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + ++L + +E+ + I + +A+TP +LI+P++PNDPI ++ Sbjct: 29 WQIRNR-IETVEELKKYLPLTQEEEEAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRA 87 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E+ DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G Sbjct: 88 VPTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 146 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q L E A+ YI + QI +V+ +GGDPL LS RL++++K LR I HV+I+R Sbjct: 147 QTDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRI 206 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 S P+V PQRI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q Sbjct: 207 GSSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQ 265 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+ Sbjct: 266 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGH 325 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK+ + + + + + ++ ++ Y Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTY 372 >gi|256026982|ref|ZP_05440816.1| lysine 2,3-aminomutase [Fusobacterium sp. D11] gi|289764966|ref|ZP_06524344.1| lysine 2,3-aminomutase [Fusobacterium sp. D11] gi|289716521|gb|EFD80533.1| lysine 2,3-aminomutase [Fusobacterium sp. D11] Length = 425 Score = 501 bits (1291), Expect = e-140, Method: Composition-based stats. Identities = 119/347 (34%), Positives = 197/347 (56%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + DL + E+ + +KE +A+TP +LI+ + PI +Q Sbjct: 24 WQVKNR-IEKLDDLKKYVKLSPEEEEGVKETLKTLRMAITPYYFSLIDMKSDRCPIRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E+ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS Sbjct: 83 IPTIQEIYQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + A+ YI + Q+ +V+ +GGD L++S K+L++++K LR I HV+I+R Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLEEIIKKLRAIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AGI L +Q Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGIPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+ND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 TVLLRGVNDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + + + ++ Y Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367 >gi|295706131|ref|YP_003599206.1| KamA family protein [Bacillus megaterium DSM 319] gi|294803790|gb|ADF40856.1| KamA family protein [Bacillus megaterium DSM 319] Length = 470 Score = 500 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 119/352 (33%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + ++ + + +TP A+L+NP +P P+ Q Sbjct: 31 WQLTN-TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPVGKELHKTKYDLEDPLDEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI + ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDAAIAYIAKTPEVRDVLISGGDGLLINDNILEYILKNLRAIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L L++ PV++ H N E +EE A L +AG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCAILRKY-HPVWLNTHFNTSIEITEETKKACEMLVDAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVAIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + I + + ++ YP S Sbjct: 328 TSGYAVPTFVIDAPGGGGKIAVQPNYIISQSASKVVLRNFEGVITTYPEPES 379 >gi|20807210|ref|NP_622381.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4] gi|254478895|ref|ZP_05092258.1| KamA family protein [Carboxydibrachium pacificum DSM 12653] gi|20515713|gb|AAM23985.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4] gi|214035161|gb|EEB75872.1| KamA family protein [Carboxydibrachium pacificum DSM 12653] Length = 417 Score = 500 bits (1289), Expect = e-139, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 210/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ + + ++L + +E+ + I + +A+TP +LI+P++PNDPI ++ Sbjct: 23 WQIANR-IETVEELKKYLPLSEEEEEAISKALQKLRMAITPYYLSLIDPNDPNDPIRKRA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL PE+ DP+ ++ SP+ G+ HRYPDR+L+ + C +YCR C RR G Sbjct: 82 VPTIHELYQAPEDLVDPLYEDVDSPVPGLTHRYPDRVLMLVTDQCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + E + YI+ QI +V+ +GGDPL LS RL++++K LR I HV+I+R Sbjct: 141 ETDAPMPMDKIEKQIEYIRNTPQIRDVLISGGDPLTLSDSRLEEIIKRLREIPHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 S VP+V P RI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q Sbjct: 201 GSSVPVVLPMRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSKRACEMLADAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ L+ Sbjct: 260 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSFGLSHFRTPVSKGIEIIEGLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK+ + + + + + ++ ++ Y Sbjct: 320 TSGYCVPTFVVDAPGGGGKIPVGPNYVISQSHDKIVLRNYEGVIVTY 366 >gi|73668214|ref|YP_304229.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro] gi|72395376|gb|AAZ69649.1| L-lysine 2,3-aminomutase [Methanosarcina barkeri str. Fusaro] Length = 414 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 126/354 (35%), Positives = 205/354 (57%), Gaps = 5/354 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH+ + + ++L + + + ++IK+ + +A++P A+LI+P +PN PI Q Sbjct: 16 WQYRHR-IETVEELEKLIKLSEPEKEDIKKALEVFPMAISPYYASLIDPKDPNCPIRMQA 74 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 +P EL E EDP+ ++ SP + I HRYPDR+L + + C +YCR C R+ V Sbjct: 75 VPSSAELKKSSWELEDPLCEDRDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 134 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G + S K + YI+E S+I +V+ +GGD L++S +RL +L L I HV+I+ Sbjct: 135 G-NREYDYSEKAIREGIEYIREHSEIRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIV 193 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R SRVP+ PQRI PEL + L++ V++ H NHP E + EA A+ LA AG+ L Sbjct: 194 RLGSRVPVTLPQRITPELCEILEKYP-SVWLNTHFNHPKEITPEAKKAMRMLAKAGVPLG 252 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +QSVLL+G+ND P I+ L ++++ +PYYL+ DL+ G HFR + G +I+ L+ Sbjct: 253 NQSVLLRGVNDCPMIIKKLCHELLKIKTRPYYLYQCDLSFGLEHFRTPVSRGIEIIEMLR 312 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SGL P +++D PGG GK+ + + + + + ++ ++ YP + Sbjct: 313 GHTSGLAVPTFVIDAPGGGGKIPVGPNYLISSSDTGVVLRNYEGVICMYPEPEA 366 >gi|194016677|ref|ZP_03055290.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061] gi|194011283|gb|EDW20852.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Bacillus pumilus ATCC 7061] Length = 466 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 124/350 (35%), Positives = 205/350 (58%), Gaps = 3/350 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + +DL + +E+ + +K + + +TP A+L+NP +P P+ Q Sbjct: 31 WQLTH-TVKTLEDLEKVVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+ YI+E ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI EL + LK+ PV++ H N E ++EA A RL NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG P +++D PGG GK+ + + + + + ++ YP Sbjct: 328 TSGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYPEP 377 >gi|157692660|ref|YP_001487122.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032] gi|157681418|gb|ABV62562.1| lysine 2,3-aminomutase [Bacillus pumilus SAFR-032] Length = 466 Score = 500 bits (1288), Expect = e-139, Method: Composition-based stats. Identities = 124/350 (35%), Positives = 205/350 (58%), Gaps = 3/350 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + +DL + +E+ + +K + + +TP A+L+NP +P P+ Q Sbjct: 31 WQLTH-TVKTLEDLEKIVNLTEEEREGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPIAEELHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+ YI+E ++ +V+ +GGD L+++ + L+ +LK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDAAIGYIRETPEVRDVLISGGDGLLINDQVLEYILKNLRDIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI EL + LK+ PV++ H N E ++EA A RL NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDELCEILKKY-HPVWLNTHFNTSIEITKEAKEACERLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVMIRVRPYYIYQCDLSEGIGHFRTPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG P +++D PGG GK+ + + + + + ++ YP Sbjct: 328 TSGYAVPSFVVDAPGGGGKIALQPNYLLSQSPDKVVLRNFEGVITSYPEP 377 >gi|307265361|ref|ZP_07546918.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter wiegelii Rt8.B1] gi|306919645|gb|EFN49862.1| lysine 2,3-aminomutase YodO family protein [Thermoanaerobacter wiegelii Rt8.B1] Length = 423 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 127/347 (36%), Positives = 211/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + + ++L + +E+ I + +A+TP +LI+P++PNDPI ++ Sbjct: 29 WQIRNR-IETVEELKKYLPLTQEEEQAISKTLQTLRMAITPYYLSLIDPNDPNDPIRKRA 87 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E+ DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR G Sbjct: 88 VPTINELYRASEDLVDPLSEDVDSPVPGLTHRYPDRVLLLITDQCSMYCRHCTRRRFSG- 146 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q L E A+ YI + QI +V+ +GGDPL LS RL++++K LR I HV+I+R Sbjct: 147 QTDAPLPMDKIERAIEYIAKTPQIRDVLISGGDPLTLSDDRLERIIKRLREIPHVEIIRI 206 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 S P+V PQRI PEL+ LK+ P+++ H NHP+E +E++ A LA+AGI L +Q Sbjct: 207 GSSTPVVLPQRITPELVNMLKKY-HPIWLNTHFNHPHEITEDSRRACEMLADAGIPLGNQ 265 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+ND ++ L+ V++R++PYY++ DL+ G SHFR + +G +I+ +L+ Sbjct: 266 TVLLRGVNDCVHVMKKLVHELVKIRVRPYYIYQCDLSLGLSHFRTPVSKGIEIIEALRGH 325 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK+ + + + + + ++ ++ Y Sbjct: 326 TSGFCVPTFVVDAPGGGGKIPVGPNYVISQSHDKVVLRNYEGVITTY 372 >gi|19705171|ref|NP_602666.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296328274|ref|ZP_06870803.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|19713110|gb|AAL93965.1| Lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|296154578|gb|EFG95366.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 425 Score = 500 bits (1287), Expect = e-139, Method: Composition-based stats. Identities = 118/347 (34%), Positives = 199/347 (57%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ L S +DL + +E+ + + +A+TP +LI+ ++ PI +Q Sbjct: 24 WQVKNR-LESVEDLKKYVDLSEEETEGVVRTLETLRMAITPYYFSLIDLNSDRCPIRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS Sbjct: 83 IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + A+ YI + Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + + + ++ Y Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367 >gi|311068654|ref|YP_003973577.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942] gi|310869171|gb|ADP32646.1| L-lysine 2,3-aminomutase [Bacillus atrophaeus 1942] Length = 472 Score = 499 bits (1286), Expect = e-139, Method: Composition-based stats. Identities = 121/350 (34%), Positives = 205/350 (58%), Gaps = 3/350 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + +L + +E+ + ++ + + +TP A+L+NP NP PI Q Sbjct: 31 WQLTH-TVRTLDELKKVIHLTEEEEEGVRISTKTIPLNITPYYASLMNPDNPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG P +++D PGG GK+ + + + + + ++ YP Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEP 377 >gi|294499134|ref|YP_003562834.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551] gi|294349071|gb|ADE69400.1| L-lysine 2,3-aminomutase [Bacillus megaterium QM B1551] Length = 469 Score = 499 bits (1285), Expect = e-139, Method: Composition-based stats. Identities = 123/352 (34%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + +DL + ++ + +K + + +TP A L++ ++P PI Q Sbjct: 31 WQLTN-TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDENDPKCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+ YI QI +V+ +GGD L+++ L+ +LK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L LK+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +I+D PGG GK+ + + I + + + ++ YP + Sbjct: 328 TSGYAVPTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYPEPQN 379 >gi|296329460|ref|ZP_06871947.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674784|ref|YP_003866456.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str. W23] gi|296153342|gb|EFG94204.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413028|gb|ADM38147.1| L-lysine 2,3-aminomutase [Bacillus subtilis subsp. spizizenii str. W23] Length = 471 Score = 498 bits (1283), Expect = e-139, Method: Composition-based stats. Identities = 118/352 (33%), Positives = 207/352 (58%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI +L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDQLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKIILRNFEGVITSYPEPEN 379 >gi|321311619|ref|YP_004203906.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5] gi|320017893|gb|ADV92879.1| L-lysine 2,3-aminomutase [Bacillus subtilis BSn5] Length = 471 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 118/352 (33%), Positives = 206/352 (58%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEPEN 379 >gi|52080665|ref|YP_079456.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580] gi|52786038|ref|YP_091867.1| hypothetical protein BLi02294 [Bacillus licheniformis ATCC 14580] gi|319645375|ref|ZP_07999608.1| KamA protein [Bacillus sp. BT1B_CT2] gi|52003876|gb|AAU23818.1| lysine 2,3-aminomutase [Bacillus licheniformis ATCC 14580] gi|52348540|gb|AAU41174.1| KamA [Bacillus licheniformis ATCC 14580] gi|317393184|gb|EFV73978.1| KamA protein [Bacillus sp. BT1B_CT2] Length = 469 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 120/352 (34%), Positives = 204/352 (57%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + +DL + KE+ + ++ + + +TP A+L+NP +P PI Q Sbjct: 31 WQLTN-TVRTLEDLKKVVNLTKEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLAEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+ YI++ + +V+ +GGD L+++ + L+ +LK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDQAIGYIRDTPDVRDVLISGGDGLLINDQILEYILKNLRAIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI +L LK+ PV++ H N E ++EA A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDKLCSILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ I + + + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKIAIQPNYLISQSPDKVVLRNFEGVITSYPEPEN 379 >gi|291484572|dbj|BAI85647.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. natto BEST195] Length = 471 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 118/352 (33%), Positives = 206/352 (58%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVTLRNFEGVITSYPEPEN 379 >gi|262066228|ref|ZP_06025840.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693] gi|291380084|gb|EFE87602.1| L-lysine 2,3-aminomutase [Fusobacterium periodonticum ATCC 33693] Length = 425 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 197/347 (56%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + DL + E+ + + +A+TP +LI+ ++ P+ +Q Sbjct: 24 WQVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPVRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS Sbjct: 83 IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R Sbjct: 143 SDD-AMPMDRIDRAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLREIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI PEL LK+ P+++ H NHP E + EA A LANAG+ L +Q Sbjct: 202 GTRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLANAGVPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + G + + ++ Y Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPGRVVLRNFEGVITTY 367 >gi|254303334|ref|ZP_04970692.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323526|gb|EDK88776.1| lysine 2,3-aminomutase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 425 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 196/347 (56%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + DL + E+ + + +A+TP +LI+ ++ PI +Q Sbjct: 24 WQVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPIRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS Sbjct: 83 IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + A+ YI + Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + + + ++ Y Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367 >gi|16079027|ref|NP_389850.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168] gi|221309872|ref|ZP_03591719.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168] gi|221314195|ref|ZP_03596000.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319118|ref|ZP_03600412.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. JH642] gi|221323391|ref|ZP_03604685.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. SMY] gi|4033499|sp|O34676|KAMA_BACSU RecName: Full=L-lysine 2,3-aminomutase; Short=LAM; AltName: Full=KAM gi|2415401|gb|AAB72069.1| YodO [Bacillus subtilis] gi|2634361|emb|CAB13860.1| lysine 2,3-aminomutase [Bacillus subtilis subsp. subtilis str. 168] Length = 471 Score = 498 bits (1282), Expect = e-139, Method: Composition-based stats. Identities = 118/352 (33%), Positives = 206/352 (58%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEPEN 379 >gi|295704462|ref|YP_003597537.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319] gi|294802121|gb|ADF39187.1| L-lysine 2,3-aminomutase [Bacillus megaterium DSM 319] Length = 469 Score = 497 bits (1281), Expect = e-138, Method: Composition-based stats. Identities = 122/352 (34%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + +DL + ++ + +K + + +TP A L++ ++P PI Q Sbjct: 31 WQLTN-TIKTLEDLKKVINLTPQEEEGVKIATKTIPLNITPYYAWLMDVNDPKCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELHKTRYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+ YI QI +V+ +GGD L+++ L+ +LK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDTAINYIAANPQIRDVLISGGDGLLINDNILEYILKNLRDIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L LK+ PV++ H N E +EE+ A L+NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKRACEMLSNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKQLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIMEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +I+D PGG GK+ + + I + + + ++ YP + Sbjct: 328 TSGYAVPTFIVDAPGGGGKIPLQPNYIISQSSNKVVLRNFEGVITSYPEPQN 379 >gi|237739441|ref|ZP_04569922.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31] gi|229423049|gb|EEO38096.1| lysine 2,3-aminomutase [Fusobacterium sp. 2_1_31] Length = 425 Score = 496 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 196/347 (56%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + DL + E+ + + +A+TP +LI+ ++ PI +Q Sbjct: 24 WQVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPIRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS Sbjct: 83 IPTIQEIHQSDADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + A+ YI + Q+ +V+ +GGD L++S K+L+ +++ LR I HV+I+R Sbjct: 143 SDD-AMPMDRIDRAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIQKLRAIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LA+AG+ L +Q Sbjct: 202 GSRTPVVLPQRITPELCNMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLADAGVPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + + + ++ Y Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367 >gi|188587476|ref|YP_001919021.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179352163|gb|ACB86433.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 416 Score = 496 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 126/347 (36%), Positives = 207/347 (59%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ +T + L + ++ + I++ +A+TP A+L++ +P+ PI RQ Sbjct: 21 WQLKNR-ITDLESLKEIINLTDKEEEGIQQALKTLRMAITPYYASLMDKDDPSCPIRRQA 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P ELN + EDP+ ++ SP++GI HRYPDR+L + C +YCR C RR + G+ Sbjct: 80 VPSSLELNFGDSDLEDPLSEDTDSPVEGITHRYPDRVLFLVTDQCSMYCRHCTRRRIAGT 139 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + A+ YI+ ++ +V+ +GGD LI+S +RL+ +L L I+HV+I+R Sbjct: 140 -TDKAAPKEVVDNAIEYIKNTPRVRDVLISGGDGLIISDERLEYILDQLYKIEHVEIIRI 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI +L+ LK+ PV++ H NHP E + EA A+++LA+AGI L +Q Sbjct: 199 GTRAPVVLPQRITDDLVSILKKY-HPVWLNTHYNHPKELTSEAQKALAKLADAGIPLGNQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKGIND P + NL+ V+ R++PYY++ DL+ G HFR ++ G +IV L+ Sbjct: 258 SVLLKGINDCPGTMKNLVHELVKHRVRPYYIYQCDLSQGIEHFRTSVSAGLEIVEHLRGH 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + S + ++ ++ Y Sbjct: 318 TSGFAVPTYVVDAPGGGGKIPVMPQYLISQSPESVILRNYEGVIAKY 364 >gi|311030470|ref|ZP_07708560.1| L-lysine 2,3-aminomutase [Bacillus sp. m3-13] Length = 473 Score = 496 bits (1279), Expect = e-138, Method: Composition-based stats. Identities = 122/352 (34%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + +DL + E+ + +K + + +TP A+L+NP +P PI Q Sbjct: 31 WQLTN-TIRTLEDLKQVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISKEIYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI QI + + +GGD L+++ + L+ +LK LR I H++I+R Sbjct: 149 QIGMGVPKKQLDAAIAYIASNDQIRDCLISGGDGLLINDQILEYILKNLRAIPHLEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L LK+ PV++ H N E +EE+ A L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKLACEMLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + I + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKIAVQPNYIISQSANKVVLRNFEGVITTYPEPEN 379 >gi|89097814|ref|ZP_01170701.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911] gi|89087316|gb|EAR66430.1| Lysine 2,3-aminomutase [Bacillus sp. NRRL B-14911] Length = 495 Score = 496 bits (1278), Expect = e-138, Method: Composition-based stats. Identities = 119/352 (33%), Positives = 203/352 (57%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + +DL + E+ + +K + + +TP A+L+NP +P P+ Q Sbjct: 55 WQLTN-TIRNLEDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPVRMQS 113 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 114 VPISQEIHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 172 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI+ ++ +V+ +GGD L+++ K L+ +LK LR I HV+I+R Sbjct: 173 QIGMGVPKKQLDDAIAYIRNTPEVRDVLISGGDGLLINDKILEYILKNLREIDHVEIIRI 232 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L LK+ P+++ H N E +EEA A LA+AG+ + +Q Sbjct: 233 GTRAPVVFPQRITENLCNILKKY-HPIWLNTHFNTSIEITEEAKKACEMLADAGVPVGNQ 291 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 292 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 351 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 352 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSAEKTVLRNFEGVITTYPEPEN 403 >gi|228991284|ref|ZP_04151242.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442] gi|228997381|ref|ZP_04157001.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17] gi|229005016|ref|ZP_04162741.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4] gi|228756220|gb|EEM05540.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4] gi|228762340|gb|EEM11266.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock3-17] gi|228768508|gb|EEM17113.1| L-lysine 2,3-aminomutase [Bacillus pseudomycoides DSM 12442] Length = 482 Score = 496 bits (1277), Expect = e-138, Method: Composition-based stats. Identities = 125/352 (35%), Positives = 202/352 (57%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q Sbjct: 41 WQLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQS 99 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 100 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 158 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 159 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 218 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 219 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 277 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 278 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 337 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 338 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 389 >gi|294783510|ref|ZP_06748834.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA] gi|294480388|gb|EFG28165.1| L-lysine 2,3-aminomutase [Fusobacterium sp. 1_1_41FAA] Length = 425 Score = 495 bits (1276), Expect = e-138, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 196/347 (56%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + DL + E+ + + +A+TP +LI+ ++ P+ +Q Sbjct: 24 WQVKNR-IEKIDDLKKYVELSAEEEEGVVRTLETLRMAITPYYFSLIDMNSDRCPVRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E++ + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR GS Sbjct: 83 IPTIQEIHQADADLLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGS 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + A+ YI + Q+ +V+ +GGD L++S K+L+ ++K LR I HV+I+R Sbjct: 143 SDD-AMPMDRIDKAIEYIAKTPQVRDVLLSGGDALLVSDKKLESIIKKLREIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL LK+ P+++ H NHP E + EA A LANAG+ L +Q Sbjct: 202 GSRTPVVLPQRITPELCDMLKKY-HPIWLNTHFNHPQEVTPEAKKACEMLANAGVPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GIND ++ L+ V +R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 TVLLRGINDSVPVMKRLVHDLVMMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + + + ++ Y Sbjct: 321 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQSPHRVVLRNFEGVITTY 367 >gi|229085246|ref|ZP_04217488.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44] gi|228697965|gb|EEL50708.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-44] Length = 482 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 124/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q Sbjct: 41 WQLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQS 99 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 100 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 158 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI + Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 159 QIGMGVPKKQLDDAIAYISQTPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 218 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 219 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 277 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 278 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 337 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 338 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 389 >gi|258513921|ref|YP_003190143.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum acetoxidans DSM 771] gi|257777626|gb|ACV61520.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum acetoxidans DSM 771] Length = 427 Score = 495 bits (1274), Expect = e-138, Method: Composition-based stats. Identities = 125/352 (35%), Positives = 205/352 (58%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLR++ ++S +L + + I++ + + +A+TP A+LIN + PI Q Sbjct: 21 WQLRNRIMSS-DELDQYANLSVYEKASIQKAIDVFPMAITPYYASLINKDDSTCPIRMQC 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +EL + +DP+ ++ SP G+ HRYPDR+LL + + C +YCR C R+ VG Sbjct: 80 IPNPKELIKGSGDMDDPLHEDGDSPCPGLTHRYPDRVLLLVTNECSMYCRHCTRKRKVGD 139 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 V D A+ YI+ I +V+ +GGDP +LS RL+++++ +R I HVQ++R Sbjct: 140 -NEKVSKDSDIIKAIEYIKAHPDIRDVLLSGGDPFVLSTNRLEQIIRRVREIPHVQVIRI 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L++ LK+ P++I H NHP EF+EE+ A+++LA+AGI L +Q Sbjct: 199 GTRTPVVMPQRITDHLVKMLKKY-HPIWINTHFNHPREFTEESARALAKLADAGIPLGNQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGIND I+ L V R++PYYL+ DL+ G HFR + +G +I+ +L Sbjct: 258 TVLLKGINDCAFIIKKLAHLLVSNRVRPYYLYQCDLSRGIEHFRTPVSKGVEIMEALIGH 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + ++ ++ Y ++ Sbjct: 318 TSGFAVPTFVVDAPGGGGKIPVLPNYQLSSTSTKTVLRNYEGVICIYEEPAN 369 >gi|20092773|ref|NP_618848.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A] gi|19918069|gb|AAM07328.1| lysine 2,3-aminomutase [Methanosarcina acetivorans C2A] Length = 419 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 124/353 (35%), Positives = 201/353 (56%), Gaps = 5/353 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q R++ +T+ ++L + + +IK+ +S+A++P A+LI+P +P PI Q Sbjct: 21 WQYRNR-ITTVEELEKLIPLSDPEKADIKKALEVFSMAISPYYASLIDPEDPKCPIRMQA 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 +P EL E EDP+ ++ SP K I HRYPDR+L + + C +YCR C R+ V Sbjct: 80 VPLSAELQKSSWELEDPLCEDLDSPSKESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 139 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G + S K + YI+E ++ +V+ +GGD L++S +RL +L L I HV+I+ Sbjct: 140 G-NREYDYSEKTIREGIEYIREHPEVRDVLLSGGDALLVSDERLDWLLGELFDIPHVEIV 198 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R +R P+ PQRI PEL + L + V++ H NHP E + EA A+ LA AGI L Sbjct: 199 RIGTRAPVTLPQRITPELCEILGKYP-SVWLNTHFNHPKEITSEAKKAMGMLARAGIPLG 257 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +QSVLL+G+ND P I+ L + ++ +PYYL+ DL+ G HFR ++ G +I+ L+ Sbjct: 258 NQSVLLRGVNDCPMIIKKLCHELLRIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEMLR 317 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 SGL P +++D PGG GK+ + + + + + ++ ++ YP + Sbjct: 318 GHTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICMYPEPA 370 >gi|152975473|ref|YP_001374990.1| lysine 2,3-aminomutase YodO family protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152024225|gb|ABS21995.1| lysine 2,3-aminomutase YodO family protein [Bacillus cytotoxicus NVH 391-98] Length = 472 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 125/352 (35%), Positives = 202/352 (57%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A+L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDEAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIMKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379 >gi|319651187|ref|ZP_08005318.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2] gi|317397116|gb|EFV77823.1| lysine 2,3-aminomutase [Bacillus sp. 2_A_57_CT2] Length = 476 Score = 494 bits (1273), Expect = e-138, Method: Composition-based stats. Identities = 119/352 (33%), Positives = 201/352 (57%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + ++ + ++ + + +TP A+L+NP +P PI Q Sbjct: 31 WQLTN-TIRTVDDLKKVINLTPDEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISKEIYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA++YI+ Q+ +V+ +GGD L+++ L+ +LK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDAAISYIRSAPQVRDVLISGGDGLLINDNILEYILKNLREIDHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L LK+ PV++ H N E +E++ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEDSKRACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SV+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 SVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKISLQPNYLISQSADKVVLRNFEGVITTYPEPEN 379 >gi|298372919|ref|ZP_06982909.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058] gi|298275823|gb|EFI17374.1| L-lysine 2,3-aminomutase [Bacteroidetes oral taxon 274 str. F0058] Length = 411 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 202/347 (58%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + + + L + E+ + +KE +A+TP +LI+ NPN P+ +Q Sbjct: 22 WQVQNR-IETLEQLKKYIKLTTEEENGVKESLKTLRMAITPYYLSLIDQSNPNCPVRKQA 80 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP E + + DP+ ++ SP G+ HRYPDR+LL + +C +YCR C RR G Sbjct: 81 IPTHAETHHSAADLLDPLHEDGDSPAPGLTHRYPDRVLLLVTDMCSMYCRHCTRRRFAG- 139 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + S D A+ YI Q+ +V+ +GGD L++S RL+ ++ LR I HV+I+R Sbjct: 140 QTDSSSSKDDISKAIDYIARTPQVRDVLLSGGDALMISDTRLESIISRLREIPHVEIIRI 199 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI +L+ LK+ P+++ H NHP E +EE+IAA R+ANAGI L +Q Sbjct: 200 GTRTPVVCPQRITDDLVNMLKKY-HPIWLNTHFNHPQEVTEESIAACERMANAGIPLGNQ 258 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND + L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+ Sbjct: 259 SVLLRGVNDCVPTMKKLVHQLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIENLRGH 318 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + + G + + ++ Y Sbjct: 319 TSGYAVPTFVVDAPGGGGKTPVMPNYVISQGPHKVILRNFEGVITTY 365 >gi|2529467|gb|AAB81159.1| YokS [Bacillus subtilis subsp. subtilis str. 168] Length = 471 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 117/352 (33%), Positives = 205/352 (58%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +++ + ++ + + +TP A+L++P NP P+ Q Sbjct: 31 WQLTH-TVRTLDDLKKVINLTEDEEEGVRISTKTIPLNITPYYASLMDPDNPRCPVRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ S + G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLHEDEDSRVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++++R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKELRSIPHLEVIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L + LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDHLCEILKKY-HPVWLNTHFNTSIEMTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVVLAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYVLSQSPDKVILRNFEGVITSYPEPEN 379 >gi|154686384|ref|YP_001421545.1| hypothetical protein RBAM_019520 [Bacillus amyloliquefaciens FZB42] gi|154352235|gb|ABS74314.1| KamA [Bacillus amyloliquefaciens FZB42] Length = 473 Score = 494 bits (1272), Expect = e-137, Method: Composition-based stats. Identities = 122/352 (34%), Positives = 206/352 (58%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q Sbjct: 31 WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L + LK+ PV++ H N E +EE++AA +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDNLCEILKKY-HPVWLNTHFNTSIELTEESVAACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +G P +++D PGG GK+ + + + I + ++ YP + Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYPEPEN 379 >gi|328553134|gb|AEB23626.1| L-lysine 2,3-aminomutase [Bacillus amyloliquefaciens TA208] gi|328912092|gb|AEB63688.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens LL3] Length = 473 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 122/352 (34%), Positives = 205/352 (58%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q Sbjct: 31 WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L Q LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +G P +++D PGG GK+ + + + I + ++ YP + Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYPEPEN 379 >gi|154248906|ref|YP_001409731.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium nodosum Rt17-B1] gi|154152842|gb|ABS60074.1| lysine 2,3-aminomutase YodO family protein [Fervidobacterium nodosum Rt17-B1] Length = 422 Score = 493 bits (1270), Expect = e-137, Method: Composition-based stats. Identities = 122/347 (35%), Positives = 211/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + L + E+ + ++ +A+TP A+L++P NP PI RQ Sbjct: 24 WQIRNRIM-DVDTLKQVINLTPEEEEGVRNALKTLRMAITPYYASLMDPDNPKCPIRRQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EL + DP+ ++ SP+ G+ HRYPDR+L+ + +C +YCR C RR G Sbjct: 83 VPTAKELFTSQWDMTDPLHEDEDSPVPGLTHRYPDRVLMLVTDMCSMYCRHCTRRRFAG- 141 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + ++ +A + Y++E Q+ +V+ +GGD L++ + L+ +LK LR IKHV+I+R Sbjct: 142 QHDRARTKQEIDAMIEYVRETPQVRDVLISGGDGLLVGIEMLEYILKELRKIKHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQ I PEL LK+ P++I H NHP E + E+ A LA+AGI L +Q Sbjct: 202 GTRTPVVLPQMITPELTNMLKKY-HPIWINTHFNHPKEITPESSRACEMLADAGIPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND P I+ L+ V++R++PYY++ DL+ G +HFR ++++G +I+ +L Sbjct: 261 SVLLRGINDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGLTHFRTSVKKGLEIMEALIGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P++++D P G GK+++ + + + + + + ++ ++ Y Sbjct: 321 TSGFCVPWFVVDAPAGGGKIRVMPNYVISMSDHTVILRNYEGVIVAY 367 >gi|189500579|ref|YP_001960049.1| lysine 2,3-aminomutase YodO family protein [Chlorobium phaeobacteroides BS1] gi|189496020|gb|ACE04568.1| lysine 2,3-aminomutase YodO family protein [Chlorobium phaeobacteroides BS1] Length = 437 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 128/355 (36%), Positives = 205/355 (57%), Gaps = 6/355 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+RH K L + + L + + ++Q + + + I++TP +LIN + NDP+ Sbjct: 28 WQMRHSIKDLETFEALLDV-KLSEKQRKAFGKAAEKFPISITPYYLSLINTEDMENDPVF 86 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q +P ELNI+ + DP+ +++ SP + HRYPDR+LL + +VCP+YCR C R+ Sbjct: 87 LQSVPSPLELNIVKGDMSDPLHEDSDSPAPCVTHRYPDRVLLLVSNVCPMYCRHCTRKRK 146 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + T+ E + YI+ QI +V+ +GGDP +LS L +L LR I+HV+I Sbjct: 147 VGDE-DTIPKRSAIEQGIRYIRNNPQIRDVLLSGGDPFLLSDDYLDWILSELRKIEHVEI 205 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V P RI +L+ LK+ +PV++ H NH E ++ A A+ LA+ G+ L Sbjct: 206 IRIGTRTPVVLPCRITSDLVAILKKH-QPVWVNTHFNHSREITQSARNALGMLADGGVPL 264 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL GIND P I+ L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG C P Y++D PGG GK+ + + + + ++ ++ Y S Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379 >gi|15614818|ref|NP_243121.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125] gi|10174874|dbj|BAB05974.1| L-lysine 2,3-aminomutase [Bacillus halodurans C-125] Length = 468 Score = 493 bits (1269), Expect = e-137, Method: Composition-based stats. Identities = 122/350 (34%), Positives = 201/350 (57%), Gaps = 3/350 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +E+ + ++ + + +TP A+L+NP +P PI Q Sbjct: 30 WQLTH-TIRTIDDLKQVINLTEEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 88 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 89 VPISKEIEKTKYDMEDPLAEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 147 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+ YI + + +V+ +GGD L+++ + L+ +LK LR I HV+I+R Sbjct: 148 QIGMGVPKKQMDAAIDYIAQTPAVRDVLLSGGDGLLINDQILEYILKNLRAIPHVEIIRI 207 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L LK+ PV++ H N E ++EA A +L +AG+ + +Q Sbjct: 208 GTRAPVVFPQRITDHLCSILKKY-HPVWLNTHFNTSLEITKEAKEACEKLVDAGVPVGNQ 266 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V +R++PYY++ DL+ G SHFR I +G +I+ +L+ Sbjct: 267 AVILAGINDSTHIMKKLMHDLVAIRVRPYYVYQCDLSEGISHFRAPISKGIEIMEALRGH 326 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG P +++D PGG GKV + + I + + ++ YP Sbjct: 327 TSGYAVPTFVVDAPGGGGKVTLQPNYILSQSPSKTVLRNFEGVISTYPEP 376 >gi|145220171|ref|YP_001130880.1| L-lysine 2,3-aminomutase [Prosthecochloris vibrioformis DSM 265] gi|145206335|gb|ABP37378.1| L-lysine 2,3-aminomutase [Chlorobium phaeovibrioides DSM 265] Length = 441 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 128/355 (36%), Positives = 207/355 (58%), Gaps = 6/355 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+R+ + L + + L + EQ + + + + +++TP +LIN + NDP+ Sbjct: 28 WQMRNSIRDLKTYESLLGI-KLSHEQREAFTQTAAKFPMSITPYYLSLINTADMENDPVF 86 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q +P EL+ILP + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+ Sbjct: 87 LQSVPSPRELHILPGDMADPLHEDRDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG Q T+ S A + YI++ ++ +V+ +GGDP +LS + L +L LR I HV+I Sbjct: 147 VGDQ-DTIPSRAAISAGIEYIRQTPRVRDVLLSGGDPFLLSDEYLDWILTELRAIPHVEI 205 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V PQRI PEL+ LK+ +PV++ H NHP E ++ + A++ LA+ G+ L Sbjct: 206 IRIGTRTPVVLPQRITPELVAMLKKH-QPVWVNTHFNHPRELTQSSKNALAMLADGGLPL 264 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P Y++D PGG GK+ + + + + ++ ++ Y S Sbjct: 325 IGHTSGFSVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379 >gi|308173939|ref|YP_003920644.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7] gi|307606803|emb|CBI43174.1| lysine 2,3-aminomutase [Bacillus amyloliquefaciens DSM 7] Length = 473 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 123/352 (34%), Positives = 205/352 (58%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ + DL + +E+ + ++ + +TP A+L++P NP PI Q Sbjct: 31 WQLTH-TVRTVDDLKKVIHLTEEEEEGVRMSVKTIPLNITPYYASLMDPDNPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLSEEMHKTKYDLEDPLFEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +AA+AYI+E +I + + +GGD L+++ + L+ +LK LR I H++I+R Sbjct: 149 QIGMGVPKKQLDAAIAYIRETPEIRDCLISGGDGLLINDQILEYILKNLRDIPHLEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R PIV PQRI L Q LK+ PV++ H N E +EE++ A +L NAG+ + +Q Sbjct: 209 GTRAPIVFPQRITDNLCQILKKY-HPVWLNTHFNTSIELTEESVEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +G P +++D PGG GK+ + + + I + ++ YP + Sbjct: 328 TTGFAVPTFVVDAPGGGGKIALQPNYLLSQSPEKVVIRNFEGVITSYPEPEN 379 >gi|30020383|ref|NP_832014.1| lysine 2,3-aminomutase [Bacillus cereus ATCC 14579] gi|206971483|ref|ZP_03232433.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134] gi|218232653|ref|YP_002366998.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264] gi|228958567|ref|ZP_04120287.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229044042|ref|ZP_04191731.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676] gi|229069827|ref|ZP_04203109.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185] gi|229079468|ref|ZP_04212008.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2] gi|229109738|ref|ZP_04239324.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15] gi|229127695|ref|ZP_04256684.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4] gi|229144892|ref|ZP_04273289.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24] gi|229150521|ref|ZP_04278737.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550] gi|229178666|ref|ZP_04306030.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W] gi|229190380|ref|ZP_04317381.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876] gi|296502862|ref|YP_003664562.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171] gi|29895934|gb|AAP09215.1| Lysine 2,3-aminomutase [Bacillus cereus ATCC 14579] gi|206733468|gb|EDZ50640.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1134] gi|218160610|gb|ACK60602.1| L-lysine 2,3-aminomutase [Bacillus cereus B4264] gi|228593164|gb|EEK50982.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10876] gi|228604824|gb|EEK62281.1| L-lysine 2,3-aminomutase [Bacillus cereus 172560W] gi|228633014|gb|EEK89627.1| L-lysine 2,3-aminomutase [Bacillus cereus m1550] gi|228638614|gb|EEK95047.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST24] gi|228655772|gb|EEL11621.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-Cer4] gi|228673779|gb|EEL29037.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-15] gi|228703838|gb|EEL56284.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-2] gi|228713230|gb|EEL65123.1| L-lysine 2,3-aminomutase [Bacillus cereus F65185] gi|228725323|gb|EEL76591.1| L-lysine 2,3-aminomutase [Bacillus cereus AH676] gi|228801194|gb|EEM48091.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296323914|gb|ADH06842.1| lysine 2,3-aminomutase [Bacillus thuringiensis BMB171] Length = 473 Score = 492 bits (1268), Expect = e-137, Method: Composition-based stats. Identities = 126/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP S Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|47565659|ref|ZP_00236699.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241] gi|47557295|gb|EAL15623.1| L-lysine 2,3-aminomutase [Bacillus cereus G9241] Length = 473 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 125/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP S Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|42781397|ref|NP_978644.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987] gi|42737319|gb|AAS41252.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 10987] Length = 473 Score = 492 bits (1267), Expect = e-137, Method: Composition-based stats. Identities = 125/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP S Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|150020100|ref|YP_001305454.1| lysine 2,3-aminomutase YodO family protein [Thermosipho melanesiensis BI429] gi|149792621|gb|ABR30069.1| lysine 2,3-aminomutase YodO family protein [Thermosipho melanesiensis BI429] Length = 423 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 131/347 (37%), Positives = 209/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ +T+ L + KE+ + I++ +A+TP A+L++P NP PI RQ Sbjct: 23 WQIRNR-ITNVDTLKKVINLTKEEEEGIRQSLKTLRMAITPYYASLMDPDNPKCPIRRQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EL + P + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G Sbjct: 82 VPTVKELEVKPWDMIDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + + +AA+ YI+E Q+ +V+ +GGD L+ L+ +LK LR IKHV+I+R Sbjct: 141 QHDRTRTKSEIDAAIDYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQ + EL LK+ P++I + NHP E + E+ A LA+AGI L +Q Sbjct: 201 GTRAPVVIPQIVTKELTNMLKKY-HPIWINMQFNHPKEITSESSKACEMLADAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND P I+ L+ V++R++PYY++ DL+ G SHFR +I G KI+ SL Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGISHFRTSIGTGLKIMESLIGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P Y++D P G GK+++ + N + + ++ ++ Y Sbjct: 320 TSGFCVPTYVVDAPAGGGKIRLMPQYLISYSNNTAILRNYEGVIVAY 366 >gi|30262308|ref|NP_844685.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames] gi|47527599|ref|YP_018948.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor'] gi|49185154|ref|YP_028406.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne] gi|49479498|ref|YP_036410.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|52143159|ref|YP_083670.1| lysine 2,3-aminomutase [Bacillus cereus E33L] gi|65319605|ref|ZP_00392564.1| COG1509: Lysine 2,3-aminomutase [Bacillus anthracis str. A2012] gi|118477725|ref|YP_894876.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam] gi|165870485|ref|ZP_02215139.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488] gi|167632881|ref|ZP_02391207.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442] gi|167639704|ref|ZP_02397974.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193] gi|170686947|ref|ZP_02878166.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465] gi|170706603|ref|ZP_02897062.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389] gi|177649254|ref|ZP_02932256.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174] gi|190565714|ref|ZP_03018634.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I] gi|196033856|ref|ZP_03101267.1| L-lysine 2,3-aminomutase [Bacillus cereus W] gi|196040024|ref|ZP_03107327.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99] gi|196043261|ref|ZP_03110499.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108] gi|206974107|ref|ZP_03235025.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97] gi|217959809|ref|YP_002338361.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187] gi|218903441|ref|YP_002451275.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820] gi|222095894|ref|YP_002529951.1| lysine 2,3-aminomutase [Bacillus cereus Q1] gi|225864277|ref|YP_002749655.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102] gi|227814883|ref|YP_002814892.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684] gi|228914904|ref|ZP_04078509.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228927370|ref|ZP_04090427.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228933607|ref|ZP_04096457.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228945921|ref|ZP_04108264.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228985395|ref|ZP_04145554.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229091290|ref|ZP_04222508.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42] gi|229121855|ref|ZP_04251075.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201] gi|229139003|ref|ZP_04267580.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26] gi|229155888|ref|ZP_04283989.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342] gi|229184527|ref|ZP_04311730.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1] gi|229196526|ref|ZP_04323270.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293] gi|229601618|ref|YP_002866645.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248] gi|254684881|ref|ZP_05148741.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CNEVA-9066] gi|254722289|ref|ZP_05184077.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A1055] gi|254737328|ref|ZP_05195032.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Western North America USA6153] gi|254743487|ref|ZP_05201172.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Kruger B] gi|254751644|ref|ZP_05203681.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Vollum] gi|254760163|ref|ZP_05212187.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Australia 94] gi|301053835|ref|YP_003792046.1| lysine 2,3-aminomutase [Bacillus anthracis CI] gi|30256939|gb|AAP26171.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Ames] gi|47502747|gb|AAT31423.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. 'Ames Ancestor'] gi|49179081|gb|AAT54457.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. Sterne] gi|49331054|gb|AAT61700.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar konkukian str. 97-27] gi|51976628|gb|AAU18178.1| lysine 2,3-aminomutase [Bacillus cereus E33L] gi|118416950|gb|ABK85369.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis str. Al Hakam] gi|164713640|gb|EDR19163.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0488] gi|167512413|gb|EDR87789.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0193] gi|167531693|gb|EDR94358.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0442] gi|170128334|gb|EDS97202.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0389] gi|170668998|gb|EDT19742.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0465] gi|172084328|gb|EDT69386.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0174] gi|190563741|gb|EDV17706.1| L-lysine 2,3-aminomutase [Bacillus anthracis Tsiankovskii-I] gi|195993536|gb|EDX57493.1| L-lysine 2,3-aminomutase [Bacillus cereus W] gi|196025570|gb|EDX64239.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB108] gi|196029283|gb|EDX67887.1| L-lysine 2,3-aminomutase [Bacillus cereus NVH0597-99] gi|206748263|gb|EDZ59652.1| L-lysine 2,3-aminomutase [Bacillus cereus H3081.97] gi|217065467|gb|ACJ79717.1| L-lysine 2,3-aminomutase [Bacillus cereus AH187] gi|218537953|gb|ACK90351.1| L-lysine 2,3-aminomutase [Bacillus cereus AH820] gi|221239952|gb|ACM12662.1| lysine 2,3-aminomutase [Bacillus cereus Q1] gi|225789207|gb|ACO29424.1| L-lysine 2,3-aminomutase [Bacillus cereus 03BB102] gi|227005066|gb|ACP14809.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. CDC 684] gi|228586882|gb|EEK44956.1| L-lysine 2,3-aminomutase [Bacillus cereus m1293] gi|228598938|gb|EEK56555.1| L-lysine 2,3-aminomutase [Bacillus cereus BGSC 6E1] gi|228627495|gb|EEK84221.1| L-lysine 2,3-aminomutase [Bacillus cereus ATCC 4342] gi|228644358|gb|EEL00613.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST26] gi|228661644|gb|EEL17264.1| L-lysine 2,3-aminomutase [Bacillus cereus 95/8201] gi|228692056|gb|EEL45797.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-42] gi|228774348|gb|EEM22755.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228813795|gb|EEM60073.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228826067|gb|EEM71850.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228832266|gb|EEM77846.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|228844700|gb|EEM89746.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|229266026|gb|ACQ47663.1| L-lysine 2,3-aminomutase [Bacillus anthracis str. A0248] gi|300376004|gb|ADK04908.1| lysine 2,3-aminomutase [Bacillus cereus biovar anthracis str. CI] gi|324326330|gb|ADY21590.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 473 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 125/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP S Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|218897268|ref|YP_002445679.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842] gi|228900889|ref|ZP_04065104.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222] gi|228908066|ref|ZP_04071914.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200] gi|228939455|ref|ZP_04102043.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228972309|ref|ZP_04132920.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228978923|ref|ZP_04139289.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407] gi|218545608|gb|ACK98002.1| L-lysine 2,3-aminomutase [Bacillus cereus G9842] gi|228780797|gb|EEM29009.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis Bt407] gi|228787326|gb|EEM35294.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228820155|gb|EEM66192.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228851484|gb|EEM96290.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 200] gi|228858815|gb|EEN03260.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis IBL 4222] gi|326940003|gb|AEA15899.1| lysine 2,3-aminomutase [Bacillus thuringiensis serovar chinensis CT-43] Length = 473 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 126/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP S Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|229161268|ref|ZP_04289255.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803] gi|228622364|gb|EEK79203.1| L-lysine 2,3-aminomutase [Bacillus cereus R309803] Length = 473 Score = 491 bits (1266), Expect = e-137, Method: Composition-based stats. Identities = 124/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK+LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKSLREIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP S Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|229074953|ref|ZP_04207960.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18] gi|229096796|ref|ZP_04227766.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29] gi|229102897|ref|ZP_04233591.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28] gi|229115778|ref|ZP_04245180.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3] gi|228667661|gb|EEL23101.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock1-3] gi|228680570|gb|EEL34753.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-28] gi|228686638|gb|EEL40546.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock3-29] gi|228708181|gb|EEL60347.1| L-lysine 2,3-aminomutase [Bacillus cereus Rock4-18] Length = 473 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 126/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP S Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|157363352|ref|YP_001470119.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae TMO] gi|157313956|gb|ABV33055.1| lysine 2,3-aminomutase YodO family protein [Thermotoga lettingae TMO] Length = 419 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 132/347 (38%), Positives = 213/347 (61%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLR++ + + L + ++ + ++ +A+TP A L++P NP PI Q Sbjct: 23 WQLRNRIM-NLDVLQEVVNLTDQEREGVRHSLKFLRMAITPYYATLMDPENPRCPIRMQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +ELNI EE DP+ ++ SP+KG+ HRYPDR+LL + C +YCR C RR G Sbjct: 82 IPTAKELNISQEEMIDPLHEDVDSPVKGLTHRYPDRVLLLITDQCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + LS + +A+ YI++ +I +V+ +GGDPL LS ++L+ ++ +R I+HV+I+R Sbjct: 141 ETDSPLSDELLNSAIDYIKQNKRIRDVLLSGGDPLTLSTEKLENIISRIREIEHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+V P RI EL LK+ P+++ H NHP E + ++ A+S LA+AGI L +Q Sbjct: 201 GTRVPVVLPMRITEELTSMLKKY-HPIWLNTHFNHPKEITPQSRRALSMLADAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND P+I+ L+ V+ R++PYY++ DL+ G SHFR T+ +G +I+ L+ Sbjct: 260 SVLLRGINDCPQIMKKLVHELVKNRVRPYYIYQCDLSRGLSHFRTTVAKGIEIIEYLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ ++ + +G G + ++ + Y Sbjct: 320 TSGFAVPTYVIDAPGGGGKIPVEPQYLISMGEGKVVLRNYEGGIFVY 366 >gi|228921012|ref|ZP_04084347.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838558|gb|EEM83864.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 473 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 125/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+ YI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAITYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP S Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|21227036|ref|NP_632958.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1] gi|20905357|gb|AAM30630.1| lysine 2,3-aminomutase [Methanosarcina mazei Go1] Length = 419 Score = 491 bits (1265), Expect = e-137, Method: Composition-based stats. Identities = 122/353 (34%), Positives = 203/353 (57%), Gaps = 5/353 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q R++ +T+ ++L L+ + +IK+ + +A++P A+LI+P +P P+ Q Sbjct: 21 WQYRNR-ITTVEELEKLILLSDTEKRDIKKALEVFPMAISPYYASLIDPDDPECPVRLQA 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLK--GIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 +PQ EL E EDP+ ++ SP + I HRYPDR+L + + C +YCR C R+ V Sbjct: 80 VPQSAELQKSSWELEDPLCEDQDSPSEESCITHRYPDRVLFLISNRCGMYCRHCTRKRRV 139 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G + S K + YI+ ++ +V+ +GGD L++S +RL +L L I HV+I+ Sbjct: 140 G-NREHDYSEKAIREGIEYIRMHHEVRDVLLSGGDALLVSDERLDWLLGELFSIPHVEIV 198 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R +R P+ PQRI PEL + L + V++ H NHP E + EA A++ LA AGI L Sbjct: 199 RLGTRAPVTLPQRITPELCEILGKYP-SVWLNTHFNHPKEITPEAKKAMNMLACAGIPLG 257 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +QSVLL+ +ND P I+ NL ++++ +PYYL+ DL+ G HFR ++ G +I+ L+ Sbjct: 258 NQSVLLRRVNDCPVIIKNLCHELLKIKTRPYYLYQCDLSFGLEHFRTSVARGIEIIEMLR 317 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 SGL P +++D PGG GK+ + + + + + ++ ++ YP + Sbjct: 318 GHTSGLAVPTFVVDAPGGGGKIPVGPNYLISSSDTGVTLRNYEGVICVYPEPA 370 >gi|282164589|ref|YP_003356974.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE] gi|282156903|dbj|BAI61991.1| L-lysine 2,3-aminomutase [Methanocella paludicola SANAE] Length = 435 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 120/350 (34%), Positives = 201/350 (57%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+RH + + S ++L + +E+ E+++ H+ + +TP +LI+ + NDP+ Sbjct: 29 WQMRHAVRDIPSFEELTGVHF-NREERRELEKTIEHFPLNITPYYLSLIDTADMKNDPVY 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q P EELN+ + DP+ + SP+ GI HRYPDR+L + +VC +YCR C R+ Sbjct: 88 KQCFPSPEELNVEKCDMVDPLAEEEDSPVPGITHRYPDRVLFLVSNVCAMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + + + YI++ I +V+ +GGDPL+L L +L L I HV++ Sbjct: 148 VG-NVDYIPDRETILKGIDYIRDNPSIRDVLLSGGDPLMLPDDYLDWILSELDNIPHVEV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +RVP+V P RI +L++ LK P++I H NHP E + + A+ +LA+AGI L Sbjct: 207 VRIGTRVPVVLPCRITDDLVEMLKGH-HPLWINTHFNHPKEVTPASREALRKLADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q VLL G+ND P+I+ L + V+ R++PYY+ DL+ G SHFR ++ +G +I+ +L Sbjct: 266 GNQCVLLAGVNDCPQIMKKLFQKLVQNRVRPYYMFQCDLSEGLSHFRTSVSKGIEIIENL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + + ++ ++ Y Sbjct: 326 VGHTSGFAVPTYVVDAPGGGGKIPVMPNYLISSATNKVVMRNYEGVITTY 375 >gi|193213047|ref|YP_001999000.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum NCIB 8327] gi|193086524|gb|ACF11800.1| lysine 2,3-aminomutase YodO family protein [Chlorobaculum parvum NCIB 8327] Length = 440 Score = 491 bits (1264), Expect = e-137, Method: Composition-based stats. Identities = 129/355 (36%), Positives = 205/355 (57%), Gaps = 6/355 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+RH + L + + L + + EQ E + ++ TP +LIN + NDP+ Sbjct: 28 WQMRHSIRDLDTFERLLDI-TLSDEQRKAFGETVQKFPMSTTPYYLSLINTDDMENDPVF 86 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q +P EL I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+ Sbjct: 87 LQSVPSPLELKIMKGDMADPLHEDEDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + T+ + +A + YI+ Q+ +V+ +GGDP +LS + L +L LR I+HV+I Sbjct: 147 VGDE-DTIPNRAAIQAGIDYIRNTPQVRDVLLSGGDPFLLSDEMLDWILTELRAIEHVEI 205 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V PQRI PEL+ L + +PV++ H NHP E ++ A A++RLA+ G+ L Sbjct: 206 IRVGTRTPVVLPQRITPELVAILGKH-QPVWVNTHFNHPREMTQSARNALARLADVGVPL 264 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG C P Y++D PGG GK+ + + + + ++ ++ Y S Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379 >gi|253582165|ref|ZP_04859388.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium ATCC 27725] gi|251835704|gb|EES64242.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Fusobacterium varium ATCC 27725] Length = 382 Score = 490 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 114/334 (34%), Positives = 194/334 (58%), Gaps = 2/334 (0%) Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73 L + E+ + +K+ +A+TP +L++ ++PN P+ +Q IP +E++ + Sbjct: 3 LKKYITLSAEEEEGVKKTLETLRMAITPYYFSLMDINDPNCPVRKQAIPSIKEIHKAEAD 62 Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G+ + + Sbjct: 63 LLDPLHEDEDSPVPGLTHRYPDRVLLLITDMCSMYCRHCTRRRFAGANDD-AMPMDRIDK 121 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 A+ YI + Q+ +V+ +GGD L++S + L+ ++ LR I HV+I+R SR P+V PQRI Sbjct: 122 AIEYIAKTPQVRDVLLSGGDALLVSDETLEYIISKLRAIPHVEIVRIGSRTPVVLPQRIT 181 Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 PEL++ LK+ P+++ H NHP E + E+ A +ANAGI L +QSVLL+GIND + Sbjct: 182 PELVEMLKKY-HPIWLNTHFNHPKEVTPESKKACELMANAGIPLGNQSVLLRGINDCVHV 240 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 + L+ V++R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D Sbjct: 241 MKRLVHDLVKMRVRPYYIYQCDLSMGLEHFRTPVSKGIEIIEGLRGHTSGYAVPTFVVDA 300 Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 PGG GK + + + + ++ Y Sbjct: 301 PGGGGKTPVMPQYVISQAPHKVVLRNFEGVITTY 334 >gi|228952639|ref|ZP_04114715.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807105|gb|EEM53648.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 473 Score = 490 bits (1263), Expect = e-136, Method: Composition-based stats. Identities = 125/352 (35%), Positives = 201/352 (57%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI+E Q+ +V+ +GGD L+++ K L+ VLK LR + HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIAYIRETPQVRDVLISGGDGLLINDKILEYVLKNLREVPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP S Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|217076542|ref|YP_002334258.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B] gi|217036395|gb|ACJ74917.1| L-lysine 2,3-aminomutase [Thermosipho africanus TCF52B] Length = 423 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 130/347 (37%), Positives = 207/347 (59%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ +T L + E+ + I+ +A+TP A+L++P NP PI RQ Sbjct: 23 WQIRNR-ITDVDTLKQVINLTPEEENGIRNSLKTLRMAITPYYASLMDPDNPKCPIRRQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EL + P + DP+ ++ SP+ G+ HRYPDR+LL + +C +YCR C RR G Sbjct: 82 VPTIKELEVKPWDMVDPLHEDEDSPVPGLTHRYPDRVLLLVTDMCAMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + ++ +AA+ YI+E Q+ +V+ +GGD L+ L+ +LK LR IKHV+I+R Sbjct: 141 QHDRARTKQEIDAAIEYIRETPQVRDVLLSGGDALLAGIDMLEYILKELRKIKHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQ + EL LK+ P+++ H NHP E + E+ A LA+AGI L +Q Sbjct: 201 GSRAPVVIPQIVTKELTDMLKKY-HPIWLNTHFNHPKEITPESSRACEMLADAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND P I+ L+ V++R++PYYL+ DL+ G SHFR +I G +I+ SL Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYLYQCDLSQGISHFRTSIGTGLRIIESLIGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P Y++D P G GK+++ + + + + ++ ++ Y Sbjct: 320 TSGFCVPTYVVDAPAGGGKIRLMPEYLISYSDKTAILRNYEGVIVAY 366 >gi|28210601|ref|NP_781545.1| L-lysine 2,3-aminomutase [Clostridium tetani E88] gi|28203039|gb|AAO35482.1| L-lysine 2,3-aminomutase [Clostridium tetani E88] Length = 424 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 198/347 (57%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ +T+ L + E+ + I + + ++P A LI+P +PNDP+ +Q Sbjct: 23 WQVKNR-ITTIDQLKKIINLLPEEEEAIDKCLKTLRMGISPYYATLIHPDDPNDPVRKQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL+ + DP+ ++ SP+ G+ H YPDR+LL + +C +YCR C RR G Sbjct: 82 VPTLHELSFSEADMFDPLHEDASSPVPGLTHAYPDRVLLLVTDMCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + AL YI+ + +V+ +GGD ++S + + +LK LR I HV+I+RF Sbjct: 141 HTDNSMPQNRIDMALDYIRNTPTVRDVLLSGGDGFMISDENIDYILKNLREIPHVEIIRF 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V+P RI L+ LK+ P+++ H NHP E +E +I A +LANAGI + +Q Sbjct: 201 GTRTPVVNPMRITDNLVNILKKY-HPIWVNTHFNHPNEITEYSIKACEKLANAGIPIGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GIND I +L+ V++R++PYYL+ DL+ G HFR + +G +I+ L+ Sbjct: 260 TVLLRGINDCVYIQKDLVHKLVKMRVRPYYLYQCDLSQGIEHFRTKVSKGIEIIEGLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK+ + + + ++ ++ Y Sbjct: 320 TSGFAVPTFVVDAPGGGGKIPVMPQYLISQSPTKVVLRNYEGVITTY 366 >gi|291286787|ref|YP_003503603.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio acetiphilus DSM 12809] gi|290883947|gb|ADD67647.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio acetiphilus DSM 12809] Length = 438 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 118/355 (33%), Positives = 204/355 (57%), Gaps = 6/355 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 Q RH T+ + +D + I E+ E+K + +A+TP A+LI+ N +DP+ Sbjct: 29 WQFRH-TIKTVEDFEDVLNISFSPEEKKEMKITLRKFPMAITPYYASLIDIENYKDDPVF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q EEL++ E DP+ +++ SP++ + HRYPDR+L + ++C +YCR C R+ Sbjct: 88 KQSCCSTEELHVESYEMGDPLAEDSDSPVENLTHRYPDRVLFHVSNMCAMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG Q + + L YI+E ++ +V+ +GGDP +LS ++ +L + I+HV++ Sbjct: 148 VGDQ-DHIPAKDSLIKGLEYIREHEEVRDVLLSGGDPFMLSDSAIEWLLDEISSIEHVEV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R+P+V P RI +LI L + ++I H NHP E ++ + A+ +L AGI + Sbjct: 207 IRIGTRMPVVLPYRITEDLIDILSKYD-NLWINTHFNHPRELTDSSRQALKKLVKAGIPM 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND P I+ +LM V+ R++PYY++ DL+ G SHFR + +G +I+ SL Sbjct: 266 GNQTVLLAGVNDCPYIMKSLMHKLVKNRVRPYYIYQCDLSEGLSHFRTPVSKGIEIIESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 + SG P Y++D PGG GK+ + + + + ++ ++ Y S Sbjct: 326 RGHTSGFAVPTYVIDAPGGGGKIPVTPNYVVSYATNKVILRNYEGVICTYKEPDS 380 >gi|182413733|ref|YP_001818799.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1] gi|177840947|gb|ACB75199.1| lysine 2,3-aminomutase YodO family protein [Opitutus terrae PB90-1] Length = 403 Score = 490 bits (1262), Expect = e-136, Method: Composition-based stats. Identities = 132/352 (37%), Positives = 214/352 (60%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ LTS +L + E+ ++ S+A+TP NLI+ +PN PI +Q Sbjct: 30 WQLKNR-LTSVAELERYMTLTPEEKAGCLFANHKLSLAITPYFFNLIDREDPNCPIRKQV 88 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+ E+ + EE+ D +G++ HSP+ G+VHRYPDR+L + C YCR+C R +V + Sbjct: 89 IPRAGEMQVSAEEQLDSLGEDAHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + E L YI+ ++ +V+ +GGDPL+LS ++L+ ++ LR I HV+ +R Sbjct: 149 AQDYNFHP-EYEQGLRYIEAHPEVRDVLLSGGDPLLLSDRKLEHLISRLRAIPHVEFIRI 207 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P+ PQRI PEL + K+ G P++++IH NHP E + E A RL+ AG+ L +Q Sbjct: 208 GSRIPVFLPQRITPELCEVFKKHG-PIWMSIHVNHPKEATAELKQACDRLSFAGVPLGNQ 266 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKG+NDD E++ L+ + +R++PYYL+ DL G SHF++ + +G +I+ +L+ Sbjct: 267 SVLLKGVNDDAEVMKALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRKGIEIIQALRGH 326 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +G P Y++D PGG GKV I+ ++K+ + + YP KS+ Sbjct: 327 TTGYAIPQYVIDAPGGGGKVPINPDYLEKITDEEVVFRNFEGRRFTYPLKST 378 >gi|258404824|ref|YP_003197566.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium retbaense DSM 5692] gi|257797051|gb|ACV67988.1| lysine 2,3-aminomutase YodO family protein [Desulfohalobium retbaense DSM 5692] Length = 440 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 122/350 (34%), Positives = 203/350 (58%), Gaps = 6/350 (1%) Query: 1 MQLRHKT--LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 QLRH L + + L + E+ + + + +++TP +LI+ + NDP+ Sbjct: 29 WQLRHSISDLATVEKLLDIEF-DPEKRKQYAKTMEIFPMSVTPYYLSLIDTEDYENDPVF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q IP +EL+I + +DP+ ++ SP GI HRYPDR+L + + C +YCR C R+ Sbjct: 88 KQAIPLPDELDIAVHDMKDPLSEDEDSPAPGITHRYPDRVLFHVSNTCSMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG V D +A L YI+ Q+ +V+ +GGDP +L ++ +L LR I+HV++ Sbjct: 148 VGDS-DFVPCRDDLQAGLDYIRNTPQVRDVLLSGGDPFMLPDHQIDWLLGQLRSIEHVEV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR+P+V P RI L+ LK+ P+++ H NHP E ++ + A+++LA+AGI L Sbjct: 207 IRIGSRMPVVLPYRITDNLVSILKKH-HPLWLNTHFNHPRELTQSSRKALAKLADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND P ++ L+ V+ R++PYYL+ DL+ G +HFR + +G +I+ SL Sbjct: 266 GNQTVLLAGVNDCPRLMKTLIHKLVQNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + I G + ++ ++ Y Sbjct: 326 IGHTSGFAVPTYVIDAPGGGGKIPVMPNYIVSWGTNKVILRNYEGVITTY 375 >gi|228965278|ref|ZP_04126372.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str. T04001] gi|228794512|gb|EEM42024.1| L-lysine 2,3-aminomutase [Bacillus thuringiensis serovar sotto str. T04001] Length = 451 Score = 490 bits (1261), Expect = e-136, Method: Composition-based stats. Identities = 126/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLRKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP S Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|229172992|ref|ZP_04300544.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3] gi|228610512|gb|EEK67782.1| L-lysine 2,3-aminomutase [Bacillus cereus MM3] Length = 473 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLKKVINLIPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP S Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|160902541|ref|YP_001568122.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95] gi|160360185|gb|ABX31799.1| lysine 2,3-aminomutase YodO family protein [Petrotoga mobilis SJ95] Length = 436 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 122/347 (35%), Positives = 201/347 (57%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLR++ +T + L + E+ IK +A+TP A L++P NP PI RQ Sbjct: 26 WQLRNR-ITDVEKLRQIINLTPEEEQGIKNTLKTLRMAITPYFATLMDPDNPKCPIRRQA 84 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EL P ++ DP+ ++ SP G+ HRYPDR+L + +C +YCR C RR G Sbjct: 85 VPSSKELIKGPWDQIDPLHEDADSPAPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 143 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + + +A+L YI++ Q+ +V+ +GGD L+ L+ +L L+ I HV+++R Sbjct: 144 QTDSNRKRNEIDASLQYIRDTPQVRDVLLSGGDALMAGIPILEYILSELKKIPHVEVVRI 203 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+V PQ I L+ LK+ P+++ NHP E + E+ A +LA+AGI L +Q Sbjct: 204 GTRVPVVFPQLITDNLVNVLKKY-HPLWLNTQFNHPKEITPESAEACRKLADAGIPLGNQ 262 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND I+ L+ V++R++PYYL+ DL+ G HFR ++ +G +I+ SL Sbjct: 263 SVLLRGVNDSKYIIMELVHELVKIRVRPYYLYQCDLSQGIEHFRTSVSKGIEIMESLIGH 322 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK++I + + + + ++ ++ Y Sbjct: 323 TSGFAIPEFVVDAPGGGGKIRIMPNYLISQNKDTVILRNYEGVISTY 369 >gi|294101198|ref|YP_003553056.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium colombiense DSM 12261] gi|293616178|gb|ADE56332.1| lysine 2,3-aminomutase YodO family protein [Aminobacterium colombiense DSM 12261] Length = 433 Score = 489 bits (1259), Expect = e-136, Method: Composition-based stats. Identities = 130/347 (37%), Positives = 206/347 (59%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ +T A+ L + K ++ IK N +A+TP A+LIN ++P+ PI +Q Sbjct: 28 WQMANR-ITEAKHLEQVVDLTKSELAMIKRSLNVLRMAITPYFASLINRNDPSCPIRKQC 86 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E I+ ++ DP+ + SP+ G+ HRYPDR LL + C +YCR C RR G Sbjct: 87 IPTLQETLIVQSDQLDPLHEEVDSPVPGLTHRYPDRCLLLVTDQCSMYCRHCTRRRFAG- 145 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q S K+ EA + YI++ I +V+ +GGDPL LS R++ +L+ +R I HV+I+R Sbjct: 146 QTDLPRSEKEIEACIDYIRKTPVIRDVLISGGDPLTLSDDRIEGILREIRAIPHVEIIRI 205 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+V P RI L LK+ P+++ + NHP E + E+ A +LANAGI L +Q Sbjct: 206 GTRVPVVMPMRITDNLCSMLKKY-HPLWMNLQFNHPREITPESADACQKLANAGIPLGNQ 264 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKGIND P I L + +++R++PYY++ DL+ G HFR +I +G +I+ L+ Sbjct: 265 SVLLKGINDCPYIFRELNQQLLKIRVRPYYIYQCDLSQGIEHFRTSIGKGVEIMEFLRGH 324 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P +++D PGG GK+ + + + + + + ++ Y Sbjct: 325 TSGLAVPTFVVDAPGGGGKIPVMPNYVVSRSDRKTVLRNFEGVLTVY 371 >gi|95930512|ref|ZP_01313247.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] gi|95133347|gb|EAT15011.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] Length = 437 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 128/355 (36%), Positives = 206/355 (58%), Gaps = 6/355 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+ K + S D I+ E +I++ + + +++TP +LIN + NDP+ Sbjct: 30 WQM-SKCIKSVDDFEQLLGIEFEPEYRKKIEQTVDTFPLSITPYYLSLINTDDYANDPVF 88 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ P EEL +L + DP+ ++ SP GI HRYPDR+L + ++C +YCR C R+ Sbjct: 89 RQAFPVPEELQVLDHDMADPLAEDQDSPAPGITHRYPDRVLFHISNICSMYCRHCTRKRK 148 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG Q TV ++ EA L YI+ + +V+ +GGDPL+LS L +L L I+HVQ+ Sbjct: 149 VGDQ-DTVPGREEIEAGLEYIRNNPVVRDVLLSGGDPLMLSDDHLDWILTELDQIEHVQV 207 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R+P+V P RI +L+ LK+ P+++ H NHP E + + A+ +LA+AGI L Sbjct: 208 VRLGTRMPVVLPYRITDDLVAVLKKH-HPIWVNTHFNHPREMTTSSKEAVRKLADAGIPL 266 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P I+ L+ V R++PYYL+ DL+ G +HFR + +G +I+ SL Sbjct: 267 GNQSVLLAGVNDCPRIMKALVHKLVANRVRPYYLYQCDLSEGLNHFRTPVGKGIEIMESL 326 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 + SG P Y++D PGG GK+ ++ + + + + ++ ++ Y S Sbjct: 327 RGHTSGFSVPTYVVDAPGGGGKIPLNPNYLVSLSTNKVVLRNYEGVITTYKEPDS 381 >gi|288556721|ref|YP_003428656.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4] gi|288547881|gb|ADC51764.1| L-lysine 2,3-aminomutase [Bacillus pseudofirmus OF4] Length = 478 Score = 488 bits (1258), Expect = e-136, Method: Composition-based stats. Identities = 115/352 (32%), Positives = 197/352 (55%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + ++ + + +TP A+L+NP +P PI Q Sbjct: 31 WQLTN-TIRTLDDLKQVINLTPEEEEGVRISTKTIPLNITPYYASLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE+ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPIGEEIYKTKYDMEDPLEEDEDSPVAGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+ YI+ ++ +V+ +GGD L+++ L+ +LK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDGAIDYIKNTPEVRDVLISGGDGLLINDTILEYILKNLRAIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L LK+ PV++ H N E +EE+ A L N+G+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKNACEMLVNSGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ L + V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLCQDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D P G GK+ + + + + + ++ YP + Sbjct: 328 TSGYSVPTFVVDAPHGGGKITLQPNYMISQSPDKVVLRNFEGVITTYPEPEN 379 >gi|194333635|ref|YP_002015495.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris aestuarii DSM 271] gi|194311453|gb|ACF45848.1| lysine 2,3-aminomutase YodO family protein [Prosthecochloris aestuarii DSM 271] Length = 437 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 128/355 (36%), Positives = 205/355 (57%), Gaps = 6/355 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+R+ + L + + L N + +Q + E + +++TP +LIN + NDP+ Sbjct: 28 WQMRNSIRDLDTFETLLNI-TLSPDQRNVFNETVKKFPMSITPYYLSLINTSDMENDPVF 86 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ +P EL+I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+ Sbjct: 87 RQSVPSHHELDIMKGDMADPLHEDQDSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG Q T+ + + YI+ I +V+ +GGDP +L L +L+ LR I+HV+I Sbjct: 147 VGDQ-DTIPTKTSISKGIDYIRSNPAIRDVLLSGGDPFLLPDDYLDWILEELRKIEHVEI 205 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V P RI PEL+Q L++ +PV++ H NH E ++ A A+S LA+ GI L Sbjct: 206 IRIGTRTPVVLPYRITPELVQILRKH-QPVWVNTHFNHSREMTQSARNALSMLADGGIPL 264 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL GIND P I+ L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 265 GNQTVLLSGINDCPRIMKALVHQLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG C P Y++D PGG GK+ + + + + ++ ++ Y S Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379 >gi|169828773|ref|YP_001698931.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41] gi|168993261|gb|ACA40801.1| L-lysine 2,3-aminomutase [Lysinibacillus sphaericus C3-41] Length = 462 Score = 488 bits (1257), Expect = e-136, Method: Composition-based stats. Identities = 123/349 (35%), Positives = 200/349 (57%), Gaps = 3/349 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + +E+ + +K + +TP A+L+NP + PI Q Sbjct: 32 WQLTN-TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQS 90 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E+ + EDP+ ++ SP+ GI HRYPDR+L + + C +YCR+C RR G Sbjct: 91 VPLSAEIMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 149 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+ YI+ +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R Sbjct: 150 QVGMAVPKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRI 209 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI EL LK+ PV++ H N E ++EA A +L NAG+ + +Q Sbjct: 210 GTRAPVVFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQ 268 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SV+L GIND I+ L+ V++R++PYY++ DL+ G SHFR I +G +I+ SL+ Sbjct: 269 SVILTGINDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGH 328 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349 SG P +++D P G GK+ + + I + ++ ++ YP Sbjct: 329 TSGYAVPTFVVDAPNGGGKIALQPNYIISQSPEKVVLRNYEGVISSYPE 377 >gi|126652300|ref|ZP_01724476.1| KamA [Bacillus sp. B14905] gi|126590875|gb|EAZ84988.1| KamA [Bacillus sp. B14905] Length = 462 Score = 488 bits (1256), Expect = e-136, Method: Composition-based stats. Identities = 123/349 (35%), Positives = 200/349 (57%), Gaps = 3/349 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + +E+ + +K + +TP A+L+NP + PI Q Sbjct: 32 WQLTN-TIKTLDDLKKVVNLTEEEEEGVKISLQTIPLNITPYYASLMNPDDVRCPIRMQS 90 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E+ + EDP+ ++ SP+ GI HRYPDR+L + + C +YCR+C RR G Sbjct: 91 VPLSAEIMKSHYDLEDPLDEDEDSPVPGITHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 149 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+ YI+ +I +V+ +GGD L+++ K L+ +L +LR I HV+I+R Sbjct: 150 QVGMAVPKKQLDRAIDYIRNNEEIRDVLLSGGDALLINDKILEYILSSLRDIPHVEIIRI 209 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI EL LK+ PV++ H N E ++EA A +L NAG+ + +Q Sbjct: 210 GTRAPVVFPQRITTELCSILKKY-HPVWLNTHFNTSIELTDEAKEACEKLVNAGVPVGNQ 268 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SV+L GIND I+ L+ V++R++PYY++ DL+ G SHFR I +G +I+ SL+ Sbjct: 269 SVILTGINDSVPIMKKLVHDLVKIRVRPYYIYQCDLSEGISHFRAPISKGLEIIESLRGH 328 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349 SG P +++D P G GK+ + + I + ++ ++ YP Sbjct: 329 TSGYAVPTFVVDAPNGGGKIALQPNYILSQSPEKVVLRNYEGVISSYPE 377 >gi|229017613|ref|ZP_04174507.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273] gi|229023830|ref|ZP_04180315.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272] gi|228737515|gb|EEL88025.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1272] gi|228743682|gb|EEL93788.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1273] Length = 472 Score = 487 bits (1255), Expect = e-136, Method: Composition-based stats. Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379 >gi|163940087|ref|YP_001644971.1| lysine 2,3-aminomutase YodO family protein [Bacillus weihenstephanensis KBAB4] gi|229011567|ref|ZP_04168753.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048] gi|229133129|ref|ZP_04261965.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196] gi|229167131|ref|ZP_04294874.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621] gi|163862284|gb|ABY43343.1| lysine 2,3-aminomutase YodO family protein [Bacillus weihenstephanensis KBAB4] gi|228616365|gb|EEK73447.1| L-lysine 2,3-aminomutase [Bacillus cereus AH621] gi|228650338|gb|EEL06337.1| L-lysine 2,3-aminomutase [Bacillus cereus BDRD-ST196] gi|228749722|gb|EEL99561.1| L-lysine 2,3-aminomutase [Bacillus mycoides DSM 2048] Length = 472 Score = 487 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379 >gi|229030019|ref|ZP_04186084.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271] gi|228731280|gb|EEL82197.1| L-lysine 2,3-aminomutase [Bacillus cereus AH1271] Length = 478 Score = 487 bits (1255), Expect = e-135, Method: Composition-based stats. Identities = 124/352 (35%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLKKVINLIPEEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+ YI++ Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDDAIGYIRDTPQVRDVLISGGDGLLINDKILEYVLKNLREIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKKACEMLANAGVPIGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP S Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 379 >gi|205373143|ref|ZP_03225947.1| lysine 2,3-aminomutase [Bacillus coahuilensis m4-4] Length = 468 Score = 487 bits (1254), Expect = e-135, Method: Composition-based stats. Identities = 118/350 (33%), Positives = 204/350 (58%), Gaps = 3/350 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + +K + + +TP A L+N ++P PI Q Sbjct: 31 WQLTN-TIRTLDDLKKVINLTPEEEEGVKISTKTIPLNITPYYAWLMNKNDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPLGQEIHKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+ YI++ I +V+ +GGD L+++ + L+ ++K+LR I H++I+R Sbjct: 149 QIGMGVPKKQIDRAIQYIKDNDGIRDVLLSGGDALLINDQVLEYIIKSLREIPHIEIIRL 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI +L+ LK+ PV++ H N E ++EA A +L NAG+ + +Q Sbjct: 209 GTRAPVVFPQRITDKLVGILKKY-HPVWLNTHFNTSIEITKEAKEACEKLVNAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR I +G +I+ L+ Sbjct: 268 AVILAGINDSVSIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPISKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG P +++D PGG GK+ + + + G+ + + ++ YP Sbjct: 328 TSGYAVPAFVVDAPGGGGKITLQPNYLLAQGSKHVVLRNFEGVITTYPEP 377 >gi|150400676|ref|YP_001324442.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus Nankai-3] gi|150013379|gb|ABR55830.1| lysine 2,3-aminomutase YodO family protein [Methanococcus aeolicus Nankai-3] Length = 437 Score = 486 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 123/350 (35%), Positives = 201/350 (57%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 QL++ + + + +++ +++ E++E ++ + +++TP A+LI+ N DPI Sbjct: 30 WQLKNSIRDIDTFEEVIGIKF-HEDEKAELQEAADVFPLSITPYYASLIDVKNFREDPIF 88 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q EEL E DP+ ++ SP+ G+ HRYPDRIL + H C VYCR C R+ Sbjct: 89 KQSFVGVEELITENFEMADPLAEDKDSPVPGLTHRYPDRILFYISHACAVYCRHCTRKRK 148 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG ++ S K E L YI+ QI +V+ +GGDPL+L L +L L I H+++ Sbjct: 149 VGD-TDSIPSKKQIEKGLDYIRNNPQIRDVLLSGGDPLLLPDDYLDWILTELWSIPHIEV 207 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +RVP+V P RI EL+ LK+ P++I H NH E ++ + A+ +LA+ GI L Sbjct: 208 IRIGTRVPVVLPYRITDELVNMLKKH-HPLWINTHFNHIKEITKSSKNALRKLADVGIPL 266 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL+G+ND P ++ L + R++PYYL DL+ G SHFR ++ +G +I+ SL Sbjct: 267 GNQSVLLRGVNDCPNVIKKLNQKLAANRVRPYYLFQCDLSEGLSHFRTSVRKGVEIIESL 326 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + G + ++ ++ Y Sbjct: 327 IGHTSGFAVPRYVVDAPGGGGKIPVMPNYVISWGTDRVILRNYEGVITTY 376 >gi|229059963|ref|ZP_04197337.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603] gi|228719376|gb|EEL70980.1| L-lysine 2,3-aminomutase [Bacillus cereus AH603] Length = 472 Score = 486 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 123/352 (34%), Positives = 200/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + ++ + +K + + +TP A L+NP +P PI Q Sbjct: 31 WQLTN-TIKTLDDLKKVINLTPDEEEGVKISTKTIPLNITPYYAWLMNPDDPRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPISEELYKTKYDLEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+AYI E Q+ +V+ +GGD L+++ K L+ VLK LR I H++I+R Sbjct: 149 QIGMGVPKKQLDDAIAYISETPQVRDVLISGGDGLLINDKILEYVLKNLRAIPHIEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L +K+ PV++ H N E +EE+ A LANAG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNIIKKY-HPVWLNTHFNTSIEITEESKLACEMLANAGVPIGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPEN 379 >gi|51246011|ref|YP_065895.1| L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54] gi|50877048|emb|CAG36888.1| probable L-lysine 2,3-aminomutase [Desulfotalea psychrophila LSv54] Length = 439 Score = 486 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 129/355 (36%), Positives = 209/355 (58%), Gaps = 6/355 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQ--IDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 QLR+ ++ S + + I+ ++ +IKE + +++TP +LIN + NDPI Sbjct: 30 WQLRN-SIKSVEQFESLLGIEMDEKYRKKIKETLRKFPLSITPYYLSLINSEDYSNDPIF 88 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q P +EL+I P + EDP+ ++ SP+ I HRYPDR+LL++ + C +YCR C R+ Sbjct: 89 IQSFPSPKELDISPHDMEDPLAEDKDSPVPNITHRYPDRVLLQVSNTCAMYCRHCTRKRK 148 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG ++ ++ + YI++ I +V+ +GGDPL+LS L +L LR I HVQ+ Sbjct: 149 VGD-VDSIPLKQEILNGIEYIRQTPVIRDVLLSGGDPLMLSDDYLDWILSELRTIPHVQV 207 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR+P+V P R+ L+ LK+ P+++ H NHP E + A+++LANAGI L Sbjct: 208 IRIGSRMPVVLPYRVTDSLVAMLKKH-HPLWVNTHFNHPREVTASTREALAKLANAGIPL 266 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P I+ +L+ VE R++PYYL+ DLA G +HFR + +G +I+ SL Sbjct: 267 GNQSVLLAGVNDCPRIMKSLVHKLVENRVRPYYLYQCDLAEGLNHFRTPVGKGIEILESL 326 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 + SG P Y++D PGG GK+ ++ + + + ++ ++ Y S Sbjct: 327 RGHTSGFAVPTYVVDAPGGGGKIPLNPNYLVSFSTNKVILRNYEGVITTYQEPDS 381 >gi|91772337|ref|YP_565029.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242] gi|91711352|gb|ABE51279.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242] Length = 435 Score = 486 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 126/355 (35%), Positives = 202/355 (56%), Gaps = 6/355 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 QL+H + + + + L N E+ +++KE + +++TP +LI+ + NDPI Sbjct: 29 WQLKHSIRDIETFERLLGINFEPPEK-EKLKETLEKFPLSITPYYLSLIDSDDFRNDPIF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q P EEL I +E EDP+ ++ SP++GI HRYPDR+L + +VC +YCR C R+ Sbjct: 88 LQSFPSPEELIISADELEDPLSEDTDSPVEGITHRYPDRVLFHISNVCSMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + + + YI+ QI +V+ +GGDPL+LS L +L + I HV++ Sbjct: 148 VGD-IDYIPEKEKILEGIEYIRNTPQIRDVLLSGGDPLMLSDDFLDWILTEINSIPHVEV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR+P+V P RI EL+ LK+ P+++ H NHP E + + A+ +LA+AGI L Sbjct: 207 IRIGSRMPVVLPYRITDELVDVLKKH-HPIWLNTHFNHPREMTFSSRQALKKLADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND I+ L+ V+ R++PYYL+ DL+ G SHFR I +G +I+ +L Sbjct: 266 GNQTVLLAGVNDCQRIIKKLVHKLVQNRVRPYYLYQCDLSEGLSHFRTPIGKGIEIMENL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P Y++D P G GK+ + + I + ++ ++ Y S Sbjct: 326 IGHTSGFSVPTYVIDAPHGGGKIPVMPNYIISWSTNRVILRNYEGVITSYKEPES 380 >gi|149179692|ref|ZP_01858197.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1] gi|148851884|gb|EDL66029.1| Lysine 2,3-aminomutase [Bacillus sp. SG-1] Length = 468 Score = 486 bits (1253), Expect = e-135, Method: Composition-based stats. Identities = 118/352 (33%), Positives = 198/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + T+ + DL + E+ + ++ + + +TP A L+N + PI Q Sbjct: 31 WQLTN-TIRTLDDLKKVINLTPEEEEGVRISTKTIPLNITPYYAWLMNEEDDRCPIRMQS 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E++ + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 90 VPIGKEIHKTKYDMEDPLHEDEDSPVPGLTHRYPDRVLFLVTNQCSMYCRYCTRRRFSG- 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K + A+ YI+E Q+ +V+ +GGD L+++ K L+ VLK LR I HV+I+R Sbjct: 149 QIGMGVPKKQLDEAINYIRETPQVRDVLLSGGDGLLINDKILEYVLKNLRDIPHVEIIRI 208 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI L LK+ PV++ H N E +EE+ A L +AG+ + +Q Sbjct: 209 GTRAPVVFPQRITENLCNILKKY-HPVWLNTHFNTSIEITEESKKACEMLVDAGVPVGNQ 267 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 268 AVILAGINDSVPIMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGH 327 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ + + + + + ++ YP + Sbjct: 328 TSGYAVPTFVVDAPGGGGKIALQPNYMISQSADKVVLRNFEGVITTYPEPEN 379 >gi|310780280|ref|YP_003968612.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter polytropus DSM 2926] gi|309749603|gb|ADO84264.1| beta-lysine acetyltransferase ;L-lysine 2,3-aminomutase [Ilyobacter polytropus DSM 2926] Length = 716 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 126/350 (36%), Positives = 202/350 (57%), Gaps = 6/350 (1%) Query: 1 MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 QL+H ++ + L + + + +++ + A TP +LI+ + NDP+ Sbjct: 28 WQLKH-SIKDIETLESVFDVELDAKDKKSMQKTIEQFPFAATPYYLSLIDIGDYKNDPVY 86 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q +P EELN+ + DP+ +++ SP+ GI HRYPDR+LL + +VC +YCR C R+ Sbjct: 87 KQAVPDIEELNLTNCDMSDPLHEDHDSPVPGITHRYPDRVLLLVSNVCSMYCRHCTRKRK 146 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + + + YI+ ++I +V+ +GGDP +LS L +L ++ I HV++ Sbjct: 147 VGDM-DNIPDKETIMNGIEYIKSHTEIRDVLLSGGDPFLLSDDYLDWILSEVKKIPHVEV 205 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V PQRI LI LK+ P++I H NHP EF+EE+ +ISRLA+AGI L Sbjct: 206 IRIGTRTPVVLPQRITDNLINVLKKH-HPIWINTHFNHPKEFTEESKKSISRLADAGIPL 264 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL +ND P+I+ L+ V RI+PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 265 GNQSVLLSRVNDCPKIMKKLVHNLVANRIRPYYLYQCDLSEGLSHFRTPVGKGIEIIESL 324 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + ++ ++ Y Sbjct: 325 IGHTSGFAIPRYVIDAPGGGGKIPVMPSYLISWSQNKVILRNYEGVITTY 374 >gi|332971462|gb|EGK10416.1| L-lysine 2,3-aminomutase [Desmospora sp. 8437] Length = 435 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 119/350 (34%), Positives = 197/350 (56%), Gaps = 3/350 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H T+ DL +K+ ++ + + +TP A ++ +P+ PI Q Sbjct: 24 WQLTH-TIRKLDDLKQVINLKENEVGGVGISHQTIPLNITPYYALQMDTEDPSCPIRMQS 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL + EDP+ ++ SP+ G+ HRYPDR+L + + C +YCR+C RR G Sbjct: 83 VPLSTELEQTKYDMEDPLLEDTDSPVPGLTHRYPDRVLFLITNQCSMYCRYCTRRRFSG- 141 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q G + K +A + YI+ Q+ +V+ +GGD L+++ + ++ +LK LR I HV+I+R Sbjct: 142 QIGMGVPKKQMDACIDYIRSNPQVRDVLLSGGDGLLVNDRIIEYLLKNLREIPHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI +L LK+ PV++ H NHP E + EA A LA+AG+ L +Q Sbjct: 202 GTRAPVVFPQRITEDLCNILKKY-HPVWLNTHFNHPKEITPEAKRACEMLADAGVPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +V+L GIND P I+ L V++R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 261 AVILAGINDCPHIMKKLNHELVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIMEYLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG P +++D PGG GK+ + + + + + + ++ YP Sbjct: 321 TSGYAVPTFVVDAPGGGGKIPVAPNYVISQSSQKTVLRNFEGVITSYPEP 370 >gi|124485172|ref|YP_001029788.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z] gi|124362713|gb|ABN06521.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z] Length = 453 Score = 486 bits (1252), Expect = e-135, Method: Composition-based stats. Identities = 128/350 (36%), Positives = 201/350 (57%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 Q+RH +++ Q + ++ +E++ + I++TP +LI+ + NDPI Sbjct: 43 WQVRHAVRSIDMVQQVLGI-TFDPKEREELQRTVEKFPISITPYYLSLIDTEDYRNDPIF 101 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ P EL + E DP+ ++ SP + I HRYPDR+L + + C +YCR C R+ Sbjct: 102 RQAFPSPAELIVENYELSDPLAEDKDSPCECITHRYPDRVLFLVSNTCAMYCRHCTRKRK 161 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG K ++ + +AYI+E +QI +V+ +GGDP +LS + L +L L I HV++ Sbjct: 162 VGD-KDSIPDREKILEGIAYIRENTQIRDVLLSGGDPFMLSDESLDWILTELTAIPHVEV 220 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +RVP+V P RI +L+ LK+ KP++I NHP E + A AA+++L +AGI L Sbjct: 221 IRIGTRVPVVLPFRITNQLVDILKKH-KPIWINTQFNHPKEMTPSAQAAVAKLVDAGIPL 279 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL IND P I+ L+ V+ RI+PYYL+ DL+ G SHFR I +G +I+ SL Sbjct: 280 GNQSVLLARINDCPVIMKELVHQLVKNRIRPYYLYQCDLSEGISHFRTPIAKGIEIMESL 339 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + + ++ I+ Y Sbjct: 340 IGHTSGFAVPRYVVDAPGGGGKIPVSPNYLLTWSVNKVVLRNYEGIICTY 389 >gi|160879786|ref|YP_001558754.1| lysine 2,3-aminomutase YodO family protein [Clostridium phytofermentans ISDg] gi|160428452|gb|ABX42015.1| lysine 2,3-aminomutase YodO family protein [Clostridium phytofermentans ISDg] Length = 393 Score = 486 bits (1251), Expect = e-135, Method: Composition-based stats. Identities = 135/350 (38%), Positives = 221/350 (63%), Gaps = 3/350 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q R++ +T+ +L + + +++ EI + + +A+TP A+L++P + N PI Q Sbjct: 21 WQFRNR-ITTVAELTESIDLTEQEKQEITQCLGKFRMAITPYYASLMDPTDRNCPIRMQA 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E ILP E DP+ + SP+ GIVHRYPDR+L + H C +YCR C RR +VG Sbjct: 80 VPSNLENRILPCEMADPLNEEGESPVPGIVHRYPDRVLFLVTHQCSMYCRHCTRRRLVG- 138 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 ++ V+S K+ + A+ YI+ K +I +V+ +GGDPL +S ++L+ +LK LR I+HV+I+R Sbjct: 139 EEDMVISDKEIDTAVEYIRSKEEIRDVLISGGDPLTMSDEKLEHILKKLRSIEHVEIIRI 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+V P RI EL L+ +P++I H NHP E +++++ A +RL +AGI L +Q Sbjct: 199 GTRVPVVLPMRITLELTNMLRNY-EPIWINTHFNHPKEITKDSMDACARLVDAGIPLGNQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND +I+ +L+ V+ RI+PYYL+ DL+ G HFR +E G +++ L+ Sbjct: 258 SVLLRGINDSTDIMKDLLLKLVKNRIRPYYLYQCDLSQGLGHFRTRVETGIEMIHHLQGY 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 ISG P +++D PGG GK+ ++ I + + + ++ ++ YP Sbjct: 318 ISGYAIPKFVIDAPGGGGKIPVNPEYIISIDDNEVVMRNYKGDLYTYPQP 367 >gi|242280776|ref|YP_002992905.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio salexigens DSM 2638] gi|242123670|gb|ACS81366.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio salexigens DSM 2638] Length = 437 Score = 485 bits (1250), Expect = e-135, Method: Composition-based stats. Identities = 121/355 (34%), Positives = 203/355 (57%), Gaps = 6/355 (1%) Query: 1 MQLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 +R+ T+ + I + + + + +A+TP +LI+ + NDP+ Sbjct: 29 WHVRN-TIRTVSGFEKVLGIKFSDSERKKHEMTLRKFPLAITPYYLSLIDEEDYENDPVF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q P EEL I + DP+ ++ SP+ GI HRYPDR+L + ++C +YCR C R+ Sbjct: 88 LQSFPSPEELKIERCDMTDPLHEDEDSPVPGITHRYPDRVLFHISNLCSMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG Q ++ S+ E + YI+ Q+ +V+ +GGDP +LS ++L +L + I+HV++ Sbjct: 148 VGDQ-DSIPSTSQLEKGIEYIRNTPQVRDVLLSGGDPFMLSDEKLDWILTKIGEIEHVEV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R+P+V P RI +L+ LK+ P++I H NHP E ++ + AI++LA+AGI L Sbjct: 207 VRIGTRMPVVLPYRITDDLVNMLKKH-HPLWINTHFNHPREVTDSSRRAIAKLADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P ++ L + V+ R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 266 GNQSVLLAGVNDCPRLIKTLNQKLVKNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 + SG P Y++D PGG GK+ + + I + ++ ++ Y S Sbjct: 326 RGHTSGFAVPTYVVDAPGGGGKIPVMPNYIVSWATNKVVLRNYEGVITTYTEPDS 380 >gi|224367500|ref|YP_002601663.1| KamA1 [Desulfobacterium autotrophicum HRM2] gi|223690216|gb|ACN13499.1| KamA1 [Desulfobacterium autotrophicum HRM2] Length = 436 Score = 484 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 121/350 (34%), Positives = 201/350 (57%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q++H K++ + L + EQ +K+ + + +++TP +LIN + +DPI Sbjct: 28 WQIKHCVKSIDLLESLLEI-KLPFEQRVLLKKTMDKFPMSITPYYLSLINTDDLEHDPIF 86 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ + EL ++ +DP+ ++ SP+ GI HRYPDR+L + + C +YCR C R+ Sbjct: 87 RQSVASVRELEFSNDDMKDPLHEDKDSPVPGITHRYPDRVLFLVSNRCAMYCRHCTRKRK 146 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG ++ ++ A + YI+ +I +V+ +GGDPL+LS L +L L I+HV++ Sbjct: 147 VGD-VDSIPGKQEILAGIDYIRNNPEIRDVLLSGGDPLLLSTSYLDWILTELEKIEHVEV 205 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V P RI + LK P++I H NHP E + A A+++LANAGI L Sbjct: 206 IRIGTRTPVVLPYRITDAMTNMLKRH-HPIWINTHFNHPREVTASARDALTKLANAGIPL 264 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND P I+ +L+ V R++PYYL+ DL+ G +HFR + +G +I+ SL Sbjct: 265 GNQTVLLAGVNDCPRIMRSLVHKLVLNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESL 324 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P Y++D PGG GK+ + + + + ++ ++ Y Sbjct: 325 IGHTSGFCVPTYVIDAPGGGGKIPVMPNYLISWSTNKVILRNYEGVITTY 374 >gi|218961635|ref|YP_001741410.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas acidaminovorans] gi|167730292|emb|CAO81204.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Candidatus Cloacamonas acidaminovorans] Length = 415 Score = 484 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 126/347 (36%), Positives = 209/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ +T+ L ++ E+ K+ + + +A+TP +LI+ NP DPI Q Sbjct: 21 WQIKNR-ITTHAQLSKYIELQPEEEAVFKDKAFSFRMAITPHYLSLIDHSNPYDPIRLQA 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+ E +I P + DP+ ++ +P+ G+ HRYPDR+LL L C +YCR C RR G Sbjct: 80 IPRIAESHISPSDMADPLSEDADAPVPGMTHRYPDRVLLLLTDQCAMYCRHCTRRRKAG- 138 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + ++ E AL YI+E ++ +VI +GGDPL LS +RL +L L I+H++I+R Sbjct: 139 EHDAPMPKENVEKALEYIKEHKEVRDVILSGGDPLTLSDERLDDILNRLSKIEHIEIVRL 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQR L+ L++ K V++ H NHP E E++ A++++A GI + +Q Sbjct: 199 GTRTPVVLPQRFTDSLLNILQKY-KFVWLNTHYNHPNELCEDSCKALAKIAETGIPMGNQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKG+ND+ +++ L+ V+ R++PYY++ DL+ G SHFR I +G +I+ SL+ Sbjct: 258 SVLLKGVNDNVDVMKALVHKLVKNRVRPYYIYQCDLSEGISHFRTPIAKGIEIMESLRGH 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGLC P Y++D PGG GK+ + + + G + ++ + Y Sbjct: 318 TSGLCVPTYVVDAPGGGGKIPVMPNYVISQMPGRVILRNYEGFITAY 364 >gi|77919002|ref|YP_356817.1| hypothetical protein Pcar_1401 [Pelobacter carbinolicus DSM 2380] gi|77545085|gb|ABA88647.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380] Length = 457 Score = 484 bits (1248), Expect = e-135, Method: Composition-based stats. Identities = 123/350 (35%), Positives = 204/350 (58%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 +H + + + + + + + + + + +++TP A+LI+P + NDP+ Sbjct: 49 WHAKHAIQDIDTFERITGI-KLDPKFRENVALTLEKFPLSITPYYASLIDPEDYQNDPVF 107 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q P EL + P E DP+ ++ SP+ GI HRYPDR+L + ++C +YCR C R+ Sbjct: 108 IQSFPSPHELEVDPREMADPLAEDKDSPVPGITHRYPDRVLFHVSNLCAMYCRHCTRKRK 167 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG Q ++ ++ + L YI E QI +V+ +GGDPL+LS + L +L LR I HVQ+ Sbjct: 168 VGDQ-DSIPGREEIKQGLEYIAENPQIRDVLLSGGDPLMLSDEYLDWILTALRNIPHVQV 226 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R+P+V P RI +L+ L++ PV++ H NHP E + A AA+ +LA+AGI L Sbjct: 227 IRIGTRMPVVLPYRITDDLVDMLRKH-HPVWVNTHFNHPRELTSSARAALRKLADAGIPL 285 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND P I+ LM V+ R++PYYL+ DL+ G HFR + +G +I+ SL Sbjct: 286 GNQTVLLAGVNDCPRIIKELMHRLVDNRVRPYYLYQCDLSEGLMHFRTPVGKGIEIMESL 345 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ ++ + + + + ++ ++ Y Sbjct: 346 IGHTSGFAIPTYVVDAPGGGGKIPLNPNYLVSLSTNKVILRNYEGVITTY 395 >gi|225181511|ref|ZP_03734953.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter alkaliphilus AHT 1] gi|225167759|gb|EEG76568.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter alkaliphilus AHT 1] Length = 423 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 131/347 (37%), Positives = 202/347 (58%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ LT+ ++L + + + + + +A+TP A L+NP + N PI Q Sbjct: 23 WQLKNR-LTTVEELRQVVALTEAEERGVASCLDTLRMAITPYYAMLMNPEDSNCPIRLQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL E EDP+ ++ SP G+ HRYPDR+LL + C +YCR C RR M G+ Sbjct: 82 IPTATELESGECEAEDPLFEDVDSPAPGLTHRYPDRVLLLITDQCSMYCRHCTRRRMAGT 141 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 L D + AL YI+ I +V+ +GGD L++S L +L LR I+HV+I+R Sbjct: 142 -NDQALPRSDVDKALDYIRNTPGIRDVLISGGDALLISDDYLDDILGKLRAIEHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQR+ PEL LK+ P++I H NHP E ++EA A+S LA+AGI L +Q Sbjct: 201 GTRTPVVLPQRVTPELCNVLKKH-HPLFINTHFNHPTELTDEAKKAVSMLADAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND P + L + + RI+PYYL+ DL+ G HFR ++ +G +I+ L+ Sbjct: 260 SVLLRGINDCPYLYKVLAQRLLMNRIRPYYLYQCDLSPGLEHFRTSVAKGIEIIEHLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P +++D PGG GK+ + + + + + ++ ++ Y Sbjct: 320 TSGLAVPTFVVDAPGGGGKIPVSPQYMISMSDEKVILRNYEGVIAAY 366 >gi|325281770|ref|YP_004254312.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712] gi|324313579|gb|ADY34132.1| lysine-2,3-aminomutase [Odoribacter splanchnicus DSM 20712] Length = 416 Score = 484 bits (1247), Expect = e-135, Method: Composition-based stats. Identities = 125/347 (36%), Positives = 206/347 (59%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + + L + ++ + I+E +A+TP +LI+P NP PI +Q Sbjct: 22 WQVKNR-IETLDQLKKYIRLTPDEEEGIRESLKTLRMAITPYYLSLIDPDNPYCPIRKQS 80 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL+ P + EDP+ ++ SP+ G+ HRYPDR+L + +C +YCR C RR G Sbjct: 81 VPTIEELHRSPADLEDPLHEDGDSPVPGLTHRYPDRVLFLITDMCSMYCRHCTRRRFAG- 139 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + YI Q+ +V+ +GGD L++S +RL+ ++K LR I HV+I+R Sbjct: 140 HHDCATPLERIDKCIEYIANTPQVRDVLLSGGDALLVSDERLEYIIKRLRGIPHVEIIRI 199 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL+ L++ P+++ H NHP E +EE+ AA +RLA+AGI L +Q Sbjct: 200 GSRTPVVLPQRITPELVNMLRKY-HPIWLNTHFNHPNEITEESAAACARLADAGIPLGNQ 258 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND ++ L+ V++R++PYY++ DL+ G HFR + +G +I+ +L+ Sbjct: 259 SVLLRGINDCTHVMKKLVHELVKIRVRPYYIYICDLSVGIGHFRTPVSKGIEIIENLRGH 318 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK+ + + G + + +V Y Sbjct: 319 TSGYAVPTFVVDAPGGGGKIPVMPTYLISQGPNRVVLRNFEGVVTTY 365 >gi|150399966|ref|YP_001323733.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii SB] gi|150012669|gb|ABR55121.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii SB] Length = 433 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 124/355 (34%), Positives = 210/355 (59%), Gaps = 6/355 (1%) Query: 1 MQLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+ + ++ S L N I + EI++ + +++TP A+LI+ N DPI Sbjct: 30 WQISN-SIKSLDMLENVLEIKFPDNERKEIQKAIEVFPMSITPYYASLIDISNLKKDPIY 88 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q + K+EL + E EDP+ ++ SP+ GI HRYPDR+L + C +YCR C R+ Sbjct: 89 KQSVASKKELIMEDFEMEDPLAEDKDSPVIGITHRYPDRVLFYVNPNCAMYCRHCTRKRK 148 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 V S+ + S ++ + A+ YI+E ++ +V+ +GGDPL+LS L +L + I+HV++ Sbjct: 149 V-SESESNPSKEEIQKAIDYIKEHPEVRDVLLSGGDPLLLSDDYLDWILSEISSIEHVEL 207 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SRVP+V PQRI L+ LK+ P+++ H NH E ++ ++ A+ +L+NAGI + Sbjct: 208 IRIGSRVPVVLPQRITDNLVNILKKY-HPIWVNTHFNHVVEITDTSVEALDKLSNAGIPI 266 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR +I +G +I+ SL Sbjct: 267 GNQTVLLSGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSISKGLEIIESL 326 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +G P Y++D PGG GK+ + + + G+ + ++ ++ Y S+ Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGVITTYKEPSN 381 >gi|315122590|ref|YP_004063079.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495992|gb|ADR52591.1| L-lysine 2,3-aminomutase protein [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 351 Score = 483 bits (1244), Expect = e-134, Method: Composition-based stats. Identities = 284/344 (82%), Positives = 318/344 (92%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 LTSAQ LY A LI++EQI+ IKEISNHYSIALTP +ANLI+PHNPNDPIARQFIPQKEE+ Sbjct: 8 LTSAQQLYKAKLIEQEQINTIKEISNHYSIALTPFMANLIDPHNPNDPIARQFIPQKEEM 67 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 NILPEEREDPIGD+NHSPLKGIVHRYPDR+LLKLLH+CPVYCRFCFRREMVGSQKGT+LS Sbjct: 68 NILPEEREDPIGDSNHSPLKGIVHRYPDRVLLKLLHICPVYCRFCFRREMVGSQKGTILS 127 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 +D +AAL+YIQ +IWEVIFTGGDPLILS RL+ VLK L IKHV+ILRFHSRVPIV Sbjct: 128 PQDIDAALSYIQNHPKIWEVIFTGGDPLILSLNRLKTVLKMLMEIKHVKILRFHSRVPIV 187 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 DPQRI+PE IQCLKE+GKP+YIAIHANHP EFS+E+++AIS+LA+AGIILLSQSVLLKGI Sbjct: 188 DPQRISPEFIQCLKESGKPIYIAIHANHPREFSQESLSAISKLADAGIILLSQSVLLKGI 247 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 NDDP+ILA+LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQKIVASLKE ISG+CQP Sbjct: 248 NDDPKILADLMRIFVESRIKPYYLHHPDLAPGTSHFRLTIEEGQKIVASLKENISGICQP 307 Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 FYILD+PGGYGKVKID+HNIKK+ + SY ITDH+NIVH YPP+S Sbjct: 308 FYILDIPGGYGKVKIDSHNIKKIDDESYLITDHNNIVHHYPPRS 351 >gi|159906176|ref|YP_001549838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C6] gi|159887669|gb|ABX02606.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C6] Length = 433 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 127/350 (36%), Positives = 209/350 (59%), Gaps = 6/350 (1%) Query: 1 MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57 QL + ++ L + + + EI++ + +++TP A+LI+ N + DPI Sbjct: 30 WQLSN-SIKDVDTLEKFLGINLDEGEKREIQKAIEVFPMSITPYYASLIDTENLDKDPIY 88 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q + +EL + E EDP+ +++ SP+ GI HRYPDR+L + C +YCR C R+ Sbjct: 89 KQSVASSKELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPSCAMYCRHCTRKRK 148 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 V S+K + S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV++ Sbjct: 149 V-SEKSSNPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVEL 207 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SRVP+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+NAGI L Sbjct: 208 IRIGSRVPVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVELTKESKVALDKLSNAGIPL 266 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 267 GNQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESL 326 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +G P Y++D PGG GK+ + + I G+ + ++ I+ Y Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYIVSWGSDRVILRNYEGIITTY 376 >gi|317152560|ref|YP_004120608.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio aespoeensis Aspo-2] gi|316942811|gb|ADU61862.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio aespoeensis Aspo-2] Length = 437 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 123/355 (34%), Positives = 198/355 (55%), Gaps = 6/355 (1%) Query: 1 MQLRHKTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+R+ + + D I + ++ + +A+TP +LI+ + NDP+ Sbjct: 29 WQVRN-AVKTVDDFERVLGIEFPARKKRVYEQTLGKFPMAVTPYYLSLIDVDDYANDPVF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q P EEL I + DP+ ++ SP+ GI HRYPDR+L + + C +YCR C R+ Sbjct: 88 LQSFPSPEELKIGRYDMTDPLHEDEDSPVPGITHRYPDRVLFHVSNTCAMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG ++ S + E L YI+ Q+ +V+ +GGDPL+LS ++L +L +R I HV++ Sbjct: 148 VGD-VDSIPSRDNLERGLEYIRNTPQVRDVLLSGGDPLMLSDEKLDWLLTEIRAIDHVEV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V P RI EL+ L + P+++ H NHP E + + AI RLA+AGI L Sbjct: 207 VRIGTRTPVVLPYRITDELVSMLAKH-HPLWLNTHFNHPRELTASSRRAIQRLADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND ++ L ++ RI+PYYL+ DL+ G +HFR I +G +I+ SL Sbjct: 266 GNQSVLLAGVNDCQRLIRTLNLKLIKNRIRPYYLYQCDLSEGLTHFRTPIGKGIEIIESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 + SG P Y++D PGG GK+ + + + G + ++ ++ Y S Sbjct: 326 RGHTSGFSVPTYVVDAPGGGGKIPVMPNYVVSWGPNKVVLRNYEGVITTYHEPES 380 >gi|309389800|gb|ADO77680.1| L-lysine 2,3-aminomutase [Halanaerobium praevalens DSM 2228] Length = 419 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 118/347 (34%), Positives = 209/347 (60%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ +T +++L + + +EI+E+ + + +TP A L++ + N P+ Q Sbjct: 28 WQVKNR-VTDSEELAKLINLDDGEKEEIEEVLEKFRMGITPYYATLMDADDHNCPVRMQA 86 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E ++ + EDP+ ++ SP+ GI HRYPDR+L + C +YCR C RR G Sbjct: 87 VPDIMETHLSGSDMEDPLHEDGDSPVDGITHRYPDRVLFLITDQCSMYCRHCTRRRFAG- 145 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + + + + L Y++ Q+ +V+ +GGD L++S +L+ ++K L I HV+++R Sbjct: 146 QNDSGVPMERIDKCLEYVRNTPQVRDVLLSGGDCLLISDDKLEYIIKELSEIDHVEVIRL 205 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI +L+ LK+ P+++ H NHP E ++EA A ++LANAGI L +Q Sbjct: 206 GSRTPVVMPQRITDDLVNMLKKY-HPIWLNTHFNHPKEITKEAAEACAKLANAGIPLGNQ 264 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVL++GIND E++ +L++ V++R++PYY++ DL+ G HFR + +G +I+ SL+ Sbjct: 265 SVLMRGINDSSEVMMDLVQKLVQIRVRPYYIYQCDLSMGIEHFRTKVSKGLEIMESLRGH 324 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P Y++D PGG GK + + + + ++ ++ Y Sbjct: 325 TSGYCVPTYVIDAPGGGGKTPVMPQYLISMSPTKVVLRNYEGVITTY 371 >gi|224170200|ref|XP_002339353.1| predicted protein [Populus trichocarpa] gi|222874958|gb|EEF12089.1| predicted protein [Populus trichocarpa] Length = 361 Score = 483 bits (1243), Expect = e-134, Method: Composition-based stats. Identities = 123/350 (35%), Positives = 208/350 (59%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 QL+H + + + + L ++ ++ + +++TP +LIN + NDP+ Sbjct: 12 WQLKHSIQDIDTVETLLGIRF-DPKKRKALEMTVKKFPLSITPYYLSLINTDDHENDPVF 70 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q P EL I + DP+ ++ SP+ G+ HRYPDR+LL++ +VC +YCR C R+ Sbjct: 71 KQAFPCSRELEIEKHDMADPLSEDKDSPVPGVTHRYPDRVLLQVSNVCSMYCRHCTRKRK 130 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + ++ +D + Y+++ +I +V+ +GGDPL+LS L +L +R I HVQ+ Sbjct: 131 VGD-RDSIPGREDILKGIDYVRQHPEIRDVLLSGGDPLMLSDDYLDWILTEVRRIPHVQV 189 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R+P+V P RI PEL++ LK+ +P+++ H NHP E + A A+ LA+AGI L Sbjct: 190 IRIGTRMPVVLPYRITPELVERLKKH-QPLWLNTHFNHPREINASAKEALRLLADAGIPL 248 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND I+ +L+ VE R++PYYL+ DLA G SHFR + +G +I+ SL Sbjct: 249 GNQSVLLAGVNDCQRIMKSLVHKLVENRVRPYYLYQCDLAEGLSHFRTPVGKGIEIMESL 308 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 + SG P Y++D PGG GK+ ++ + + + + ++ ++ Y Sbjct: 309 RGHTSGFAVPTYVIDAPGGGGKIPMNPNYLISLSTNKVVLRNYEGVITTY 358 >gi|150402033|ref|YP_001329327.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C7] gi|150033063|gb|ABR65176.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C7] Length = 433 Score = 482 bits (1242), Expect = e-134, Method: Composition-based stats. Identities = 128/355 (36%), Positives = 212/355 (59%), Gaps = 6/355 (1%) Query: 1 MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57 QL + ++ L N ++ E+ EI++ + +++TP A+LI+ N + DPI Sbjct: 30 WQLSN-SIKDVDTLENFLGITLENEEKKEIQKAIEVFPMSITPYYASLIDIKNLDKDPIY 88 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q + +EL + E EDP+ ++ SP+ GI HRYPDR+L + C +YCR C R+ Sbjct: 89 KQSVASSKELILENFEMEDPLSEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRK 148 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 V S+K + S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV++ Sbjct: 149 V-SEKSSNPSKEEIQKAIDYIRNNDKIRDVLLSGGDPLLLSDEYLDWILSEISSIKHVEL 207 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SRVP+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+++GI L Sbjct: 208 IRIGSRVPVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPL 266 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 267 GNQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTPVSKGLEIIESL 326 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +G P Y++D PGG GK+ + + I G+ + ++ I+ Y S+ Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYIVSWGSDRVILRNYEGIITTYVEPSN 381 >gi|256828026|ref|YP_003156754.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium baculatum DSM 4028] gi|256577202|gb|ACU88338.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium baculatum DSM 4028] Length = 437 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 120/350 (34%), Positives = 202/350 (57%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 +R+ K++ + L +++ ++ + + +A+TP +LI+P + NDP+ Sbjct: 29 WHVRNSIKSIEGVERLLGIEF-TEKERKALRNTTEKFPMAITPYYLSLIDPSDYRNDPVF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q P +EL I + DP+ ++ SP+ G+ HRYPDR+LL + + C +YCR C R+ Sbjct: 88 MQAFPSTDELRIESHDMSDPLHEDEDSPVPGLTHRYPDRVLLHVSNTCAMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + ++ S +D + YI+ Q+ +V+ +GGDP +LS L +L + I+HV++ Sbjct: 148 VGD-RDSIPSREDLRQGIEYIRNTPQVRDVLLSGGDPFLLSDDMLDWLLTEIGGIEHVEV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V P RI EL++ LK+ P++I H NHP E + + A+++LANAGI L Sbjct: 207 VRIGTRTPVVLPYRITDELVEMLKKH-HPLWINTHFNHPAEITASSKQALAKLANAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P ++ L V R++PYYL+ DL+ G +HFR I +G +I+ SL Sbjct: 266 GNQSVLLAGVNDCPRLIKVLNHKLVRNRVRPYYLYQCDLSEGLTHFRTPIGKGIEILESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 + SG P Y++D PGG GK+ + + I + ++ ++ Y Sbjct: 326 RGHTSGFSIPTYVVDAPGGGGKIPLMPNYIISWTANKVVLRNYEGVITTY 375 >gi|302340456|ref|YP_003805662.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae DSM 11293] gi|301637641|gb|ADK83068.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae DSM 11293] Length = 436 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 120/350 (34%), Positives = 202/350 (57%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 QL+H ++++S + L K++ E++ + +++TP +LI + NDPI Sbjct: 29 WQLKHSIRSISSFETLTGIQF-DKDKRQELEATVAQFPLSITPYYLSLIEKDDYQNDPIF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q EL + EREDP+ ++ SP++G+ HRYPDR+L + ++C +YCR C R+ Sbjct: 88 LQSFADPRELVVQKWEREDPLHEDKDSPVEGLTHRYPDRVLFHVSNICSMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG ++ + + YI+ + +V+ +GGDPL+L L +L LR I+HV+I Sbjct: 148 VGD-VDSIPNKNQIRKGIDYIRNTPSVRDVLLSGGDPLMLDDDYLDWILTELRRIEHVEI 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR+P+V P R+ +L+ LK+ PV++ H NHP E + + A+++LA+AGI L Sbjct: 207 VRIGSRMPVVLPYRVTDDLVLMLKKH-HPVWLNTHFNHPRELTHASRTALAKLADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P ++ L++ V R++PYYL+ DL+ G +HFR + +G +I+ SL Sbjct: 266 GNQSVLLAGVNDCPRLMKTLVQKLVYSRVRPYYLYQCDLSEGLTHFRTPVGKGIEILESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ I + + + ++ ++ Y Sbjct: 326 IGHTSGFSVPTYVIDAPGGGGKIPIMPNYLLSWSPNKVVLRNYEGVITTY 375 >gi|254445491|ref|ZP_05058967.1| KamA family protein [Verrucomicrobiae bacterium DG1235] gi|198259799|gb|EDY84107.1| KamA family protein [Verrucomicrobiae bacterium DG1235] Length = 398 Score = 482 bits (1241), Expect = e-134, Method: Composition-based stats. Identities = 129/351 (36%), Positives = 214/351 (60%), Gaps = 3/351 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ +T+ + L + E+ + ++A+TP NLI+ +PN PI +Q Sbjct: 30 WQLKNR-ITTLEQLEQHMELTPEERAGCAHANTKLAMAITPYFFNLIDREDPNCPIRKQV 88 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+++E+ + EE DP+G++ HSP+ G+VHRYPDR+L + C YCR+C R +V + Sbjct: 89 IPREDEMTVGQEEMLDPVGEDGHSPVPGLVHRYPDRVLFLVTDRCAAYCRYCTRSRLVSN 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + E L YI+E ++ +V+ +GGDPL+LS K+L +L LR I+HV+ +R Sbjct: 149 AQDYNFHP-EFEQGLKYIEEHPEVRDVLLSGGDPLLLSDKKLDYLLGRLRAIEHVEFIRI 207 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P+ PQRI PEL + K+ G P++++IH NHP E ++ A RL+ AG+ L +Q Sbjct: 208 GSRIPVFLPQRITPELCEIFKKHG-PIWMSIHTNHPKECTQTLKDACERLSFAGVPLGNQ 266 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLK +NDD E++ L+ V +R++PYY++ DL G++H R + +G +I+ L+ Sbjct: 267 SVLLKDVNDDLEVMKALVHRLVRMRVRPYYIYQCDLITGSAHLRANVCKGIEIMKGLRGH 326 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 +G P +++D PGG GKV I+ I K+ + + + ++ YP K+ Sbjct: 327 TTGYSVPQFVIDAPGGGGKVPINPQYITKIDDEAIHFKNFEGKLYRYPLKT 377 >gi|85860656|ref|YP_462858.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB] gi|85723747|gb|ABC78690.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB] Length = 486 Score = 481 bits (1239), Expect = e-134, Method: Composition-based stats. Identities = 125/355 (35%), Positives = 205/355 (57%), Gaps = 6/355 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 QLRH K L + + L + + + + K I + +++TP +LI+ + NDP+ Sbjct: 80 WQLRHCIKDLDTFETLLDI-RLPETLRRQFKLIVEKFPMSITPYYLSLIDTEDLENDPVF 138 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q P EL++ + DP+ ++ SP+ G+ HRYPDR+LL + + C +YCR C R+ Sbjct: 139 KQSFPAINELDVQSTDMSDPLHEDRDSPVPGLTHRYPDRVLLLISNTCAMYCRHCTRKRR 198 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + T+ S + + YI++ Q+ +V+ +GGDP +LS L +L L+ I+HV++ Sbjct: 199 VGD-RDTIPSREQIMKGIEYIRDTPQVRDVLLSGGDPFLLSTDYLDWILIELKKIEHVEV 257 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P V P RI EL++ LK+ P++I H NHP E + + AA+ +LA+AGI L Sbjct: 258 IRIGTRTPAVLPYRITDELVEMLKKH-HPLWINTHFNHPRELTASSRAALRKLADAGIPL 316 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P I+ +L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 317 GNQSVLLSGVNDCPRIMRSLVHKLVANRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 376 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG C P Y++D P G GK+ + + + + ++ ++ Y S Sbjct: 377 IGHTSGFCVPTYVIDAPAGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 431 >gi|270307638|ref|YP_003329696.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family [Dehalococcoides sp. VS] gi|270153530|gb|ACZ61368.1| L-lysine 2,3-aminomutase/beta-lysine acetyltransferase, GNAT family [Dehalococcoides sp. VS] Length = 730 Score = 479 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 133/362 (36%), Positives = 205/362 (56%), Gaps = 13/362 (3%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 + H K L + + L E+ +++ ++ +++TP +LI+P N NDP+ Sbjct: 41 WHVSHTIKDLATVEKLLGVKF-SAEKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVF 99 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q +P ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ Sbjct: 100 IQSVPSAAELNFSCHDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 159 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG T LS D L YI+ Q+ +V+ +GGDPL+LS L+ +L L+ I HVQ+ Sbjct: 160 VGDVDKT-LSRDDLVKGLEYIKNTPQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQV 218 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +RVP+V PQRI P L++ +K+ PV+I H NHP E + +I A+ LA+AGI L Sbjct: 219 IRIGTRVPVVLPQRITPHLVKIIKKY-HPVWINTHFNHPREITATSIRALRLLADAGIPL 277 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L Sbjct: 278 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 337 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350 SG P Y++D P G GK+ I + + + + ++ I+ Y PPK Sbjct: 338 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397 Query: 351 SS 352 Sbjct: 398 CG 399 >gi|307353610|ref|YP_003894661.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus petrolearius DSM 11571] gi|307156843|gb|ADN36223.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus petrolearius DSM 11571] Length = 437 Score = 479 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 121/350 (34%), Positives = 192/350 (54%), Gaps = 6/350 (1%) Query: 1 MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 QL H T+ E+ +E+KE + +A+TP +LI + NDPI Sbjct: 29 WQLSH-TIRDLDTFEKITGITFTNEKYEELKETLEKFPLAITPYYLSLIETEDYENDPIF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q P EL+I+ E+ DP+ ++ SP++GI HRYPDR+L + + C +YCR C R+ Sbjct: 88 MQSFPSVHELDIIEEDLADPLDEDRDSPVEGITHRYPDRVLFLVSNKCAMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + + YI Q+ +V+ +GGDPL+L L+ +L L I HV+I Sbjct: 148 VGD-VEYIPDKDQISKGIDYINNNPQVRDVLLSGGDPLLLDDSYLEWILSELTEIPHVEI 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR+P+V P RI+ L++ L++ P++ NHP E + + A+ +LA+ GI L Sbjct: 207 VRIGSRLPVVLPYRIDSNLVEMLRQY-HPIWFNTQFNHPREITSSSTEALRKLADGGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P I+ LM V R++PYY++ DL+ G SHFR + +G +I+ SL Sbjct: 266 GNQSVLLSGVNDCPRIMKTLMHKLVMNRVRPYYMYQCDLSEGLSHFRTPVGKGIEIIESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 + SG P Y++D PGG GK+ + + + + ++ ++ Y Sbjct: 326 RGHTSGFAVPTYVIDAPGGGGKIPLMPNYLISWSTNKVVLRNYEGVICTY 375 >gi|57234982|ref|YP_180969.1| GNAT family L-lysine 2,3-aminomutase/acetyltransferase [Dehalococcoides ethenogenes 195] gi|57225430|gb|AAW40487.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family [Dehalococcoides ethenogenes 195] Length = 708 Score = 479 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 132/362 (36%), Positives = 205/362 (56%), Gaps = 13/362 (3%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 + H K L + + L E+ +++ ++ +++TP +LI+P N NDP+ Sbjct: 19 WHVSHTIKDLATVEKLLGVKF-SVEKRRSLEDTIRNFPMSITPYYFSLIDPKNFENDPVF 77 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q +P ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ Sbjct: 78 IQSVPSAAELNFSCHDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 137 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG T LS D L YI+ Q+ +V+ +GGDPL+LS L+ +L L+ I HVQ+ Sbjct: 138 VGDVDKT-LSRDDLVKGLEYIKNTPQVRDVLLSGGDPLLLSDSMLEWLLSELKAIPHVQV 196 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +RVP+V PQRI P L++ +K+ PV++ H NHP E + +I A+ LA+AGI L Sbjct: 197 IRIGTRVPVVLPQRITPHLVKIIKKY-HPVWVNTHFNHPREITATSIRALRLLADAGIPL 255 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L Sbjct: 256 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 315 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350 SG P Y++D P G GK+ I + + + + ++ I+ Y PPK Sbjct: 316 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 375 Query: 351 SS 352 Sbjct: 376 CG 377 >gi|126178166|ref|YP_001046131.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus marisnigri JR1] gi|125860960|gb|ABN56149.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1] Length = 437 Score = 479 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 118/350 (33%), Positives = 195/350 (55%), Gaps = 6/350 (1%) Query: 1 MQLRHKT--LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 +RH +++ + L + K++ E++E ++ + + +TP +LI+ + NDPI Sbjct: 29 WHVRHAITEISTFERLLGVSF-GKDERRELEETASRFPLRITPYYLSLIDAKDLWNDPIF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q P EL + P++ EDP+ ++ P I HRYPDR+L + +VC +YCR C R+ Sbjct: 88 MQCFPSPAELQVEPDDMEDPLAEDADHPAPCITHRYPDRVLFLVSNVCAMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG ++ S + +L YI+E I +V+ +GGDP +L RL +L L I+HV++ Sbjct: 148 VGD-VDSIPSEAEVIESLDYIRENPGIRDVLLSGGDPFMLPDDRLDWILTELDDIEHVEV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V P RI EL L P+++ H NHP E + + A++RLA+AGI L Sbjct: 207 VRIGTRTPVVLPYRITEELCAMLARH-HPLWVNTHFNHPAEITASSQKALARLADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND I+ L+ V R++PYYL+ DL+ G +HFR + +G +I+ +L Sbjct: 266 GNQTVLLAGVNDCSRIMKTLVHKLVRNRVRPYYLYQCDLSEGLAHFRTPVSKGIEIIENL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + + ++ Y Sbjct: 326 IGHTSGFAVPTYVIDAPGGGGKIPVMPQYLISWSTNRVVLRNFEGVITTY 375 >gi|225163783|ref|ZP_03726082.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2] gi|224801613|gb|EEG19910.1| Lysine 2,3-aminomutase [Opitutaceae bacterium TAV2] Length = 391 Score = 479 bits (1235), Expect = e-133, Method: Composition-based stats. Identities = 134/352 (38%), Positives = 214/352 (60%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLR++ LT +DL + ++ + N S+A+TP NLI+ NP DP+ Q Sbjct: 30 WQLRNR-LTRLEDLERYMTLTPDERAGVLFAGNKLSLAITPYFFNLIDRDNPADPLRLQV 88 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+ E + EE D +G++ HSP+ G+VHRYPDR+L + C YCR+C R +V + Sbjct: 89 IPRAGESQLHAEEMLDSLGEDEHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVSN 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + E L YI+ S++ +V+ +GGDPL+LS ++L +L LR I HV+ +R Sbjct: 149 AQDYNFHP-EYEQGLRYIESHSEVRDVLLSGGDPLLLSDRKLDHLLGRLRAIPHVEFIRI 207 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P+ PQRI PEL + K+ G P++++IH NHP+E +EE AA RL+ AG+ L +Q Sbjct: 208 GSRIPVFMPQRITPELCEVFKKHG-PIWMSIHVNHPHECTEELRAACERLSYAGVPLGNQ 266 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+NDDP+ + L+ + +R++PYYL+ DL G SHF++ + G +I+ +L+ Sbjct: 267 SVLLRGVNDDPDTMRALVHRLLRMRVRPYYLYQMDLITGGSHFKVDVRRGLEIIKNLRGH 326 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +G P Y++D PGG GKV ++ ++K+ + ++ + YP S+ Sbjct: 327 TTGYAIPQYVIDAPGGGGKVPMNPDYVEKITDDEVIFRNYEGHTYRYPLTST 378 >gi|332702266|ref|ZP_08422354.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay] gi|332552415|gb|EGJ49459.1| lysine-2,3-aminomutase [Desulfovibrio africanus str. Walvis Bay] Length = 447 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 121/350 (34%), Positives = 202/350 (57%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 +RH + + S + L + E + + +++TP +LI+ + NDP+ Sbjct: 29 WHIRHTIRDIESFETLTGIRF-EPEDRAGYERTLEKFPLSITPYYLSLIDTADYANDPVF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ P EL+I P + DP+ ++ SP GI HRYPDR+L + ++C +YCR C R+ Sbjct: 88 RQAFPSVRELDIGPHDMADPLHEDEDSPAPGITHRYPDRVLFHVSNLCAMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + G + E LAYI+ ++ +V+ +GGDPL+L + L +L LR I+HV++ Sbjct: 148 VGDE-GHIPRRAQMEQGLAYIRSAPRVRDVLLSGGDPLMLPDETLDWLLWNLRKIEHVEV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR+P+V P R+ +L+ +++ PV++ H NHP E + A A+++LA+AGI L Sbjct: 207 VRIGSRMPVVLPYRVTDDLMSIIRKH-HPVWLNTHFNHPREVTRSAREALAKLADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P I+ +L+ V R++PYYL+ DL+ G +HFR + +G +I+ SL Sbjct: 266 GNQSVLLAGVNDCPRIMRSLLHKLVRNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG +P Y++D PGG GK+ + + + + ++ ++ Y Sbjct: 326 VGHTSGFARPTYVIDAPGGGGKIPVTPNYVISWATNKVVLRNYEGVITTY 375 >gi|78187430|ref|YP_375473.1| hypothetical protein Plut_1576 [Chlorobium luteolum DSM 273] gi|78167332|gb|ABB24430.1| L-lysine 2,3-aminomutase [Chlorobium luteolum DSM 273] Length = 438 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 123/355 (34%), Positives = 201/355 (56%), Gaps = 6/355 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 Q+RH +TL++ + L + EQ + + +++TP +LIN + NDP+ Sbjct: 28 WQMRHSVRTLSAFESLLGI-TLSDEQRKAFGQTVAKFPMSITPYYLSLINTRDMANDPVF 86 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q +P EL I+ + DP+ ++ SP + HRYPDR+LL + + CP+YCR C R+ Sbjct: 87 LQSVPSPRELEIMTGDMADPLHEDADSPAPCVTHRYPDRVLLLVSNTCPMYCRHCTRKRK 146 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + T+ + YI+ Q+ +V+ +GGDP +LS L +L L+ I+HV++ Sbjct: 147 VGD-RDTIPGRSAISEGIDYIRRTPQVRDVLLSGGDPFLLSDDYLDWILGELQAIEHVEV 205 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V PQRI P L+ LK+ +PV++ H NHP E ++ + A++ LA+ G+ L Sbjct: 206 IRIGTRTPVVLPQRITPALVAVLKKH-QPVWVNTHFNHPREITQSSRNALALLADGGLPL 264 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL GIND P I+ L+ V R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 265 GNQTVLLSGINDCPRIMKALVHKLVRNRVRPYYLYQCDLSEGLSHFRTPVGKGIEILESL 324 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P Y++D PGG GK+ + + + + ++ ++ Y S Sbjct: 325 IGHTSGFSVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNYEGVITTYKEPDS 379 >gi|51891173|ref|YP_073864.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863] gi|51854862|dbj|BAD39020.1| lysine 2,3-aminomutase [Symbiobacterium thermophilum IAM 14863] Length = 448 Score = 479 bits (1234), Expect = e-133, Method: Composition-based stats. Identities = 127/348 (36%), Positives = 211/348 (60%), Gaps = 5/348 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ H+ +T+ + L + +E+ I++ + + + +TP A LI+P +P+ P+ Q Sbjct: 29 WQVSHR-ITNLEQLKQVVNLTEEEEAAIRDSQHLFRLGITPHYATLIDPDDPHCPMRLQA 87 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P+ EL E DP+ ++ SP+ GI HRYPDR+L + H C +YCR C RR +VG Sbjct: 88 VPKYAELAWADYEMGDPLHEDVDSPVPGITHRYPDRVLFLITHECSLYCRHCTRRRIVGD 147 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q+ + + A+AYI+ +I +V+ +GGDPL + +RL+ V+K LR I HV+I+R Sbjct: 148 QEAMSTAM--LDQAIAYIRAHPEIRDVLISGGDPLAVPDRRLEYVIKKLRAIPHVEIIRI 205 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLS 239 +R+P+V PQRI PEL+ L++ P+++ H NHP+E +A A+ RLA+AGI + Sbjct: 206 GTRMPVVLPQRITPELVNMLRQY-HPIWLNTHFNHPFEVQHPKAREAMERLADAGIPTGN 264 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLKG+ND ++ L+ V++R +PYY+++ DL+ G SHFR ++ +G I+ +L+ Sbjct: 265 QSVLLKGVNDCAVVMRRLVHELVKVRCRPYYIYNCDLSEGLSHFRTSVAKGVAIIEALRG 324 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG C P +++D PGG GK+ + + +G + + + Y Sbjct: 325 HTSGFCVPTFVVDAPGGGGKIPVMPQYLISQSDGRVILRNFEGKISIY 372 >gi|134045706|ref|YP_001097192.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5] gi|132663331|gb|ABO34977.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5] Length = 433 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 124/350 (35%), Positives = 209/350 (59%), Gaps = 6/350 (1%) Query: 1 MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57 QL + ++ L + K + EI++ + +++TP A+LI+ N + DPI Sbjct: 30 WQLSN-SIKDVDTLEKFLGINLDKHEKKEIQKAIEVFPMSITPYYASLIDTKNLDKDPIY 88 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q + +EL + E EDP+ +++ SP+ GI HRYPDR+L + C +YCR C R+ Sbjct: 89 KQSVASSKELILENFEMEDPLSEDDDSPVVGITHRYPDRVLFYINPNCAMYCRHCTRKRK 148 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 V S+K + S ++ + A+ YI+ +I +V+ +GGDPL+LS + L +L + IKHV++ Sbjct: 149 V-SEKSSNPSKEEIQKAIDYIKNNDKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVEL 207 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SRVP+V PQRI L+ LK+ P++I H NHP E ++ + A+ +L+++GI L Sbjct: 208 IRIGSRVPVVLPQRITDNLVNTLKKY-HPIWINTHYNHPVEITKASKVALDKLSDSGIPL 266 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR ++ +G +I+ SL Sbjct: 267 GNQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESL 326 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +G P Y++D PGG GK+ + + + G+ + ++ I+ Y Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITTY 376 >gi|73748139|ref|YP_307378.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1] gi|73659855|emb|CAI82462.1| L-lysine 2,3-aminomutase homologe, probable frameshift [Dehalococcoides sp. CBDB1] Length = 708 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 126/362 (34%), Positives = 202/362 (55%), Gaps = 13/362 (3%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 + H + LT+ + L E+ +++ + +++TP +LI+ N NDP+ Sbjct: 19 WHISHTIRDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVF 77 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q +P ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ Sbjct: 78 IQSVPSAAELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 137 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ+ Sbjct: 138 VGD-IDKNLSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQV 196 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +RVP+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L Sbjct: 197 IRIGTRVPVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPL 255 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L Sbjct: 256 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 315 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350 SG P Y++D P G GK+ I + + + + ++ I+ Y PPK Sbjct: 316 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 375 Query: 351 SS 352 Sbjct: 376 CG 377 >gi|326203071|ref|ZP_08192937.1| lysine 2,3-aminomutase YodO family protein [Clostridium papyrosolvens DSM 2782] gi|325986717|gb|EGD47547.1| lysine 2,3-aminomutase YodO family protein [Clostridium papyrosolvens DSM 2782] Length = 425 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 130/347 (37%), Positives = 198/347 (57%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL ++ +T+ L + E+I I++ +A+TP L+NP +P PI +Q Sbjct: 24 WQLANR-ITTITQLEQVVNLTVEEIRGIEKCLKKLRMAITPYYVTLMNPEDPACPIRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E I + DP+ + SP+ G+ HRYPDR LL + C +YCR C RR G Sbjct: 83 VPTINETYISTCDSSDPLHEGIDSPVNGLTHRYPDRALLLVTDQCSMYCRHCTRRRFAG- 141 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 LS + A+ YI+ QI +VI +GGD L +S++RL+ +LK+L+ I HV+++R Sbjct: 142 NDDKELSITNVNKAIEYIKNTKQIRDVILSGGDALCISNERLEYILKSLKAINHVEVIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+V PQRI PEL LK+ P++I NHP E + EAI A L++AGI L +Q Sbjct: 202 GTRVPVVMPQRITPELCNMLKKY-HPLWINTQFNHPNELTPEAIKACEMLSDAGIPLGNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL IND P I+ NL++ V+ R++PYYL+ DL+ G HFR + G +I+ L+ Sbjct: 261 SVLLSNINDCPYIMKNLVQGLVKSRVRPYYLYQCDLSEGIEHFRTPVTVGVEIIEMLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK+ ++ + N + + ++ Y Sbjct: 321 TSGFAVPTFVIDAPGGGGKIPVNPQYLLSQSNDKVILRNFEGVICSY 367 >gi|118579512|ref|YP_900762.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus DSM 2379] gi|118502222|gb|ABK98704.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379] Length = 440 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 130/350 (37%), Positives = 204/350 (58%), Gaps = 6/350 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57 QLRH + + + + L E+ E++E + + +++TP +LI+ N DP+ Sbjct: 29 WQLRHAIRDIATFERLLGIKF-DAERKRELEETIDKFPLSITPYYLSLIDRTNYAVDPVF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ P +EL + E EDP+ ++ SP+ GI HRYPDR+L ++ ++C +YCR C R+ Sbjct: 88 RQAFPSPDELQVTSCEHEDPLHEDADSPVPGITHRYPDRVLFQVSNICSMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG ++ + L YI+ + +V+ +GGDPL+L L +L+ LR I HVQ+ Sbjct: 148 VGD-VDSIPGKDEIMLGLEYIRRTPVVRDVLLSGGDPLMLPDSHLDWILRELRAIPHVQV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR+P+V P RI P LI+ L P+++ H NHP E + A A+SRLANAGI L Sbjct: 207 IRIGSRMPVVLPYRITPGLIRVLSRY-HPLWLNTHFNHPREITTSAREALSRLANAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND P I+ LM+ VE R++PYYL+ DL+ G SHFR + +G +I+ SL Sbjct: 266 GNQTVLLAGVNDCPMIIKTLMQRLVENRVRPYYLYQCDLSEGLSHFRTPVGKGMEIMESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + + + ++ ++ Y Sbjct: 326 VGHTSGFAVPTYVIDAPGGGGKIPVMPNYLITLATNKVVLRNYEGVITTY 375 >gi|45358424|ref|NP_987981.1| lysine 2,3-aminomutase [Methanococcus maripaludis S2] gi|44921182|emb|CAF30417.1| Lysine 2,3-aminomutase [Methanococcus maripaludis S2] Length = 433 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 126/350 (36%), Positives = 212/350 (60%), Gaps = 6/350 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 QL + ++ L N I +++ EI++ + + +++TP A+LI+ N DPI Sbjct: 30 WQLSN-SIKDVDTLENFLGITFDEKEKTEIQKAIDVFPMSITPYYASLIDIKNLGKDPIY 88 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q + +EL + E EDP+ ++ SP+ GI HRYPDR+L + C +YCR C R+ Sbjct: 89 KQSVASSKELILENFEMEDPLSEDEDSPVIGITHRYPDRVLFYINPNCAMYCRHCTRKRK 148 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 V S+K + S ++ + A+ YI+ ++I +V+ +GGDPL+LS + L +L + IKHV++ Sbjct: 149 V-SEKSSNPSKEEIQKAIDYIKNNNKIRDVLLSGGDPLLLSDEFLDWILSEISSIKHVEL 207 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SRVP+V PQRI L+ LK+ P++I H NHP E ++E+ A+ +L+++GI L Sbjct: 208 IRIGSRVPVVLPQRITDNLVNVLKKY-HPIWINTHYNHPVEITKESKKALDKLSDSGIPL 266 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND P ++ L + V R++PYYL+ DL+ G SHFR ++ +G +I+ SL Sbjct: 267 GNQTVLLAGVNDCPYVMRKLNQKLVSSRVRPYYLYQCDLSKGISHFRTSVSKGLEIIESL 326 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +G P Y++D PGG GK+ + + + G+ + ++ I+ Y Sbjct: 327 IGHTTGFAVPRYVVDAPGGGGKIPVMPNYVVSWGSDRVILRNYEGIITSY 376 >gi|289432216|ref|YP_003462089.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT] gi|288945936|gb|ADC73633.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT] Length = 730 Score = 479 bits (1233), Expect = e-133, Method: Composition-based stats. Identities = 126/362 (34%), Positives = 202/362 (55%), Gaps = 13/362 (3%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 + H + LT+ + L E+ +++ + +++TP +LI+ N NDP+ Sbjct: 41 WHISHTIRDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNYENDPVF 99 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q +P ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ Sbjct: 100 IQSVPSAAELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 159 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ+ Sbjct: 160 VGD-IDKNLSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQV 218 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +RVP+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L Sbjct: 219 IRIGTRVPVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITSTSSRALGMLADAGIPL 277 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L Sbjct: 278 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 337 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350 SG P Y++D P G GK+ I + + + + ++ I+ Y PPK Sbjct: 338 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397 Query: 351 SS 352 Sbjct: 398 CG 399 >gi|147668784|ref|YP_001213602.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1] gi|146269732|gb|ABQ16724.1| beta-lysine acetyltransferase / L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1] Length = 730 Score = 478 bits (1232), Expect = e-133, Method: Composition-based stats. Identities = 126/362 (34%), Positives = 202/362 (55%), Gaps = 13/362 (3%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 + H + LT+ + L E+ +++ + +++TP +LI+ N NDP+ Sbjct: 41 WHISHTIRDLTTVEKLLGVKF-SAEKRRSLEDTILKFPMSITPYYFSLIDRKNFENDPVF 99 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q +P ELN ++EDP+ ++ SP GI HRYPDR+L + + C +YCR C R+ Sbjct: 100 IQSVPSAAELNFSCYDKEDPLAEDVDSPAPGITHRYPDRVLFHVSNRCAMYCRHCTRKRK 159 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG LS + + L YI+ ++ +V+ +GGDPL+L L+ +L L+ I HVQ+ Sbjct: 160 VGD-IDKNLSRDELKKGLEYIKNTPRVRDVLLSGGDPLLLPDSILEWLLSELKAIPHVQV 218 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +RVP+V PQRI P L++ +++ PV+I H NHP E + + A+ LA+AGI L Sbjct: 219 IRIGTRVPVVLPQRITPHLVKIIRKY-HPVWINTHFNHPREITATSSRALGMLADAGIPL 277 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL +ND P ++ L+ VE R++PYYL+ D A G SHFR +I +G +I+ +L Sbjct: 278 GNQTVLLAKVNDCPRVMKALVHKLVENRVRPYYLYQCDPAQGLSHFRTSIGKGIEIIENL 337 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY-------PPK 350 SG P Y++D P G GK+ I + + + + ++ I+ Y PPK Sbjct: 338 IGHTSGFAVPTYVIDAPNGGGKIPIMPNYLISQSSSKVILRNYEGIITAYYQPEDYHPPK 397 Query: 351 SS 352 Sbjct: 398 CG 399 >gi|116748157|ref|YP_844844.1| lysine 2,3-aminomutase YodO family protein [Syntrophobacter fumaroxidans MPOB] gi|116697221|gb|ABK16409.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB] Length = 460 Score = 478 bits (1231), Expect = e-133, Method: Composition-based stats. Identities = 121/352 (34%), Positives = 199/352 (56%), Gaps = 2/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLR++ + + L + +++ + +A+TP A+L++ ++P+ P+ R Sbjct: 92 WQLRNR-IQDREALARIIRLSDDELKAVTSGRGPLPVAITPYYASLLDCNDPSQPVRRCV 150 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E P E EDP+G+ S L +VHRYPDR+L + C YCR+C R MVG+ Sbjct: 151 VPVDREYFHHPCETEDPLGEEKDSQLPNLVHRYPDRVLFLVTGYCSTYCRYCTRSRMVGN 210 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + ++ + A+ YI+ I +V+ +GGDPL L + L+ +L LR I HV+ LR Sbjct: 211 RGTYRFGHREWDRAIEYIERTPTIRDVLLSGGDPLTLPNDHLKWLLSRLRRIPHVEFLRI 270 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 ++VP+V PQR+ L++ LK+ P++++IH HP E + E A +RLA+AGI L SQ Sbjct: 271 GTKVPVVLPQRVTMGLVRMLKQY-HPLWMSIHFTHPDELTPETAHACTRLADAGIPLGSQ 329 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL G+ND+ E + L +++R+KPYYL+ D G+SHFR + +G +I+ L+ Sbjct: 330 TVLLSGVNDNVETMTRLFHGLLKIRVKPYYLYQCDPIPGSSHFRTPVSKGLEIIRGLRGF 389 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P Y++D PGG GKV + + + ++ ++ YP + Sbjct: 390 TSGYAVPTYVIDAPGGGGKVPLLPEYVAGRDGDDLLLRNYAGDLYRYPDPAG 441 >gi|302341654|ref|YP_003806183.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii DSM 2075] gi|301638267|gb|ADK83589.1| lysine 2,3-aminomutase YodO family protein [Desulfarculus baarsii DSM 2075] Length = 430 Score = 478 bits (1230), Expect = e-133, Method: Composition-based stats. Identities = 129/351 (36%), Positives = 205/351 (58%), Gaps = 3/351 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ LT+ Q L + +E+ + ++ +A+TP +LI+ NP DP+ R Sbjct: 75 WQVRNR-LTNPQALERFFPLAQEERRAFEAVAGRLPMAITPYYLSLIDRQNPADPLRRAV 133 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E + P E DP+ ++ G+VHRYPDR+LL C YCR+C R +VG Sbjct: 134 VPTWMEAVVSPGESHDPLAEDADMAAPGLVHRYPDRVLLLATGFCSTYCRYCTRSRLVGG 193 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 G + E ALAYI+ + +V+ +GGDPL ++ RL+ +L LR ++HV+I+R Sbjct: 194 -GGMHTGKRALERALAYIEATPAVRDVLISGGDPLTMADDRLEWLLSRLRAMRHVEIIRI 252 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 S+VP V PQR+ P L + LK+ P++I++H HP E + EA A +RLA+AG+ L SQ Sbjct: 253 GSKVPAVLPQRVTPALTRMLKKY-HPLFISLHFMHPAELTVEAAKACARLADAGVPLGSQ 311 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL GINDD + LM+ + LR++PYYL+ D G++HFR + +G +IVA L+ Sbjct: 312 TVLLAGINDDVATMRALMQGLLRLRVRPYYLYQCDPICGSAHFRTPVAKGLEIVAGLRGH 371 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 +G P Y++D PGG GKV + ++ + + + ++ + YP + Sbjct: 372 TTGYAVPTYVIDAPGGGGKVALYPESVIGRQDEALLLRNYEGGQYAYPDNA 422 >gi|312881010|ref|ZP_07740810.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260] gi|310784301|gb|EFQ24699.1| L-lysine 2,3-aminomutase [Aminomonas paucivorans DSM 12260] Length = 422 Score = 476 bits (1227), Expect = e-132, Method: Composition-based stats. Identities = 125/351 (35%), Positives = 199/351 (56%), Gaps = 3/351 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ +T+ + L + + EI+E +A+TP A+LI+P +P DP+ RQ Sbjct: 23 WQVANR-ITTVEVLRRVIPLSDPEAREIQESLGALRMAITPYYASLIDPKDPEDPVRRQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E ++ + DP+ ++ SP+ G+ HRYPDR +L L C +YCR C RR G Sbjct: 82 VPSILETHVAETDLRDPLHEDVDSPVPGLTHRYPDRGILLLTDQCSMYCRHCTRRRKAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + S AAL YI+ +V+FTGGDP ++ L VL + I HV+I+RF Sbjct: 141 ETDHAYSRDRIAAALDYIRRTPTFRDVLFTGGDPFLVDDGTLDWVLTEVGSIPHVEIVRF 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI +L LK PV++ H NHP E + ++ AA ++LANAGI L +Q Sbjct: 201 GTRTPVVMPQRITDDLCALLKRH-HPVWVNTHFNHPREITPQSRAACAKLANAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKG+ND P + L + + LR++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 260 SVLLKGVNDCPYVFRELNQQLLTLRVRPYYIYQCDLSQGIEHFRTPVAKGLEIMEYLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 SG+ P +I+D PGG GK+ + + + + + + ++ + Y + Sbjct: 320 TSGMAVPTFIVDAPGGGGKIPLLPNYLVSMSDKRVVLRNYEGVFSTYAEPA 370 >gi|294055535|ref|YP_003549193.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita akajimensis DSM 45221] gi|293614868|gb|ADE55023.1| lysine 2,3-aminomutase YodO family protein [Coraliomargarita akajimensis DSM 45221] Length = 397 Score = 476 bits (1225), Expect = e-132, Method: Composition-based stats. Identities = 130/352 (36%), Positives = 210/352 (59%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ +T + L + ++ + ++A+TP NLINP +PNDPI RQ Sbjct: 30 WQLKNR-ITRLEQLEQYLDLSPDERAGCLFANKKLALAITPYFFNLINPKDPNDPIRRQV 88 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+ E I P+E DP+G+ P+ GIVHRYPDR+L + C YCR+C R +V + Sbjct: 89 IPRAAESQIAPDEMLDPVGEEGTKPVDGIVHRYPDRVLFLVTDRCAAYCRYCTRSRLVSN 148 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + E+ L YI++ S+I +V+ +GGDPL+LS K+L +L LR I HV+ +R Sbjct: 149 AQDYNFHP-EFESGLEYIRQHSEIRDVLLSGGDPLLLSDKKLDYLLGELRKIPHVEFIRI 207 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P+ PQRI P+L ++ G P++++IH NHP E S E AA RL+ AG+ + +Q Sbjct: 208 GSRIPVFLPQRITPQLCDIFRKHG-PIWLSIHVNHPSECSLELKAACERLSYAGVPIGNQ 266 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKG+N+D ++ +L+ + +R++PYYL+ DL G++H R EG +I+ L+ Sbjct: 267 SVLLKGVNNDAGVMKSLIHRLLMMRVRPYYLYQCDLITGSAHLRTDPREGIEIIRQLRGH 326 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P +++D PGG GK+ ++ ++ + + + + ++YP K Sbjct: 327 TSGYSIPQFVIDAPGGGGKIPLNPDYVEDISETTLILRNFQGERYEYPLKCG 378 >gi|52549348|gb|AAU83197.1| lysine 23-aminomutase [uncultured archaeon GZfos27A8] Length = 437 Score = 475 bits (1224), Expect = e-132, Method: Composition-based stats. Identities = 118/355 (33%), Positives = 200/355 (56%), Gaps = 6/355 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 QL H + + + +D+ +E+ +++ + +++TP +LI+ + NDPI Sbjct: 29 WQLSHAIRDIDTFEDI-TCIKFDEEEKQVYEKVLEKFPLSITPYYLSLIDYDDYKNDPIF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q P EL I + +D + ++ SP+ GI HRYPDR+L + ++C +YCR C R+ Sbjct: 88 IQAFPDPRELVISKYDIKDSLAEDKDSPVPGITHRYPDRVLFLISNICSMYCRHCTRKRR 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG ++ + + + YI+ +I +V+ +GGDPL+LS L +L L+ I HV++ Sbjct: 148 VGD-VDSIPNRSEILKGIEYIKNTPEIRDVLLSGGDPLMLSDSYLDWILTELQTIPHVEV 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +RVP V P RI +L+ LK+ P++I NHP E + + A+ LA+AGI L Sbjct: 207 IRIGTRVPAVLPYRITDDLVNMLKKH-HPLWINTQFNHPREVTTSSREALRMLADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P ++ L++ V+ R++PYYL+ DL+ G +HFR + +G +I+ SL Sbjct: 266 GNQSVLLAGVNDCPILMKRLVQRLVQNRVRPYYLYQCDLSEGLTHFRTPVGKGIEIIESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P Y++D PGG GK++I + + + ++ ++ Y S Sbjct: 326 IGHTSGFAVPSYVIDAPGGGGKIRIMPNYLISWSTNKVILRNYEGVITSYKEPDS 380 >gi|171912149|ref|ZP_02927619.1| Lysine 2,3-aminomutase [Verrucomicrobium spinosum DSM 4136] Length = 406 Score = 475 bits (1223), Expect = e-132, Method: Composition-based stats. Identities = 133/352 (37%), Positives = 211/352 (59%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + S L ++ +E+ + N ++A+TP NLI+P +P+ PI RQ Sbjct: 34 WQLKNR-VNSLAKLEEHLVLSEEERAGVLLSGNKLAMAITPHFFNLIHPTDPDCPIRRQV 92 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+ EE P+E DP G+++H P+ G+VHRYPDR+L + C YCR+C R +V Sbjct: 93 IPRIEETWDDPDEMSDPCGEDSHMPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRVVSG 152 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 L + + EA Y++ +++ +V+ +GGD L+ S +L+ +LK LR I H++ LR Sbjct: 153 VGDQELHT-EFEAVFKYLEAHTEVRDVLLSGGDALLFSDAKLEGILKRLRAIPHIEFLRI 211 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SRVPI PQRI PEL L + P+++++H NHP E + E A+ RLAN GI L +Q Sbjct: 212 GSRVPIFLPQRITPELCTMLAKY-HPLWMSVHTNHPREITIEVKEALERLANHGIPLGNQ 270 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+NDDPE++ L+ + R++PYYL+ DL G+SH R ++ +G +I+ SL+ Sbjct: 271 SVLLRGVNDDPEVMKALVHKLLMSRVRPYYLYQCDLIQGSSHLRTSVSKGLEIIESLRGH 330 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +G P +++D PGG GKV ++ + + I ++ V DYP + Sbjct: 331 TTGYGVPQFVIDAPGGGGKVPVNPEYVLAKDSHHTLIRNYEGKVFDYPEPET 382 >gi|307298172|ref|ZP_07577976.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium mesG1.Ag.4.2] gi|306916258|gb|EFN46641.1| lysine 2,3-aminomutase YodO family protein [Thermotogales bacterium mesG1.Ag.4.2] Length = 422 Score = 474 bits (1220), Expect = e-131, Method: Composition-based stats. Identities = 121/347 (34%), Positives = 202/347 (58%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ + + L I +E+ + E +++TP A L++P+N PI RQ Sbjct: 23 WQVANR-VKTVDALRQIIDITEEEAHGVAECLRTLRMSITPYYATLMDPNNQRCPIRRQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EL I + DP+ ++ SP+ G+ HRYPDR+L + C +YCR C RR G Sbjct: 82 VPTDKELKIDKWDMIDPLHEDEDSPVPGLTHRYPDRVLFLITDQCSMYCRHCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q + K+ + A+ YI+E ++ +V+ +GGD L++ L+ +L LR I HV+I+R Sbjct: 141 QLDRARTRKEIDDAIEYIRETPEVRDVLLSGGDALLVGDDYLEYILNELREIPHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQR+ PEL++ +++ PV+I H NHP E + ++ A LA+ GI L +Q Sbjct: 201 GTRTPVVLPQRVTPELVKMIRKY-HPVWINTHFNHPLEITPDSTRACEMLADGGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND P I+ L+ V++R++PYY++ DL+ G HFR +I +G I+ SL Sbjct: 260 SVLLRGVNDSPYIMMELVHQLVKIRVRPYYIYQCDLSQGIGHFRTSIRKGIGIMESLIGN 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGLC P +++D PGG GK+++ + + ++ ++ Y Sbjct: 320 TSGLCVPTFVVDAPGGGGKIRVMPQYNISESDRVVVLRNYEGVITTY 366 >gi|241206810|ref|YP_002977906.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860700|gb|ACS58367.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 350 Score = 473 bits (1217), Expect = e-131, Method: Composition-based stats. Identities = 199/345 (57%), Positives = 259/345 (75%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K + S DL A L+ ++E++ Y++ALTP I+ LI+ +P+DPIARQF+P Sbjct: 5 KPIKSVDDLVKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 65 ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + AA YI+ +IWEVI TGGDPL+LS +RL ++++ L I HV+I+RFH+RVP Sbjct: 125 LDAAAMRAAFDYIRGHEEIWEVILTGGDPLVLSPRRLGEIMEALAGIAHVKIIRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP++I+ LI LK +GK VY+A+HANH E + EA AA +RL +AGI ++SQSVLLK Sbjct: 185 VVDPEKIDAALIGALKASGKTVYVALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IV +L+ +ISGLC Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVEALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 QP YILD+PGG+GK I ++ G+G Y +TD+ H YPP Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYSVTDYRGGEHSYPPA 349 >gi|78355236|ref|YP_386685.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217641|gb|ABB36990.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 454 Score = 472 bits (1216), Expect = e-131, Method: Composition-based stats. Identities = 120/355 (33%), Positives = 200/355 (56%), Gaps = 6/355 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57 +R+ +T+ +A+ + E+ K + + +++TP +LI+ + DP+ Sbjct: 29 WHVRNSIRTVEAAEKILGV-TFSDEKRALYKRTLDKFPMSITPYYFSLIDQEDYESDPVF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q P ELN+ P + DP+ ++ SP GI HRYPDR+L + ++C +YCR C R+ Sbjct: 88 MQAFPDIRELNVSPHDMADPLHEDEDSPAPGITHRYPDRVLFHVSNLCSMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG + +V + + YI+ I +V+ +GGDPL+LS +RL +L +R I HV+I Sbjct: 148 VGD-RDSVPDRGQLKQGIEYIRRTPAIRDVLLSGGDPLMLSDERLDWLLGEIRSIPHVEI 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR+P+V P RI L+ LK+ P+++ H NHP E + + A++R+A+AGI L Sbjct: 207 IRIGSRMPVVLPYRITDGLLAVLKKH-HPLWLNTHFNHPRELTRTSRRALARMADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL +ND P + L + V+ R++PYY++ DL+ G SHFR + +G +I+ SL Sbjct: 266 GNQSVLLADVNDCPRLFRTLNQKLVQNRVRPYYMYQCDLSEGLSHFRTPVGKGIEIIESL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG+ P Y++D PGG GK+ + + G + ++ ++ Y S Sbjct: 326 VGHTSGMAVPTYVIDAPGGGGKIPMMPNYAISQGVNKVVLRNYEGVITTYTEPDS 380 >gi|134298608|ref|YP_001112104.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum reducens MI-1] gi|134051308|gb|ABO49279.1| L-lysine 2,3-aminomutase [Desulfotomaculum reducens MI-1] Length = 406 Score = 472 bits (1215), Expect = e-131, Method: Composition-based stats. Identities = 131/347 (37%), Positives = 204/347 (58%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ +T+ L + ++ D I + +A+TP A+LI + PI Q Sbjct: 23 WQISNR-ITNVDKLSQFVHLTPKEKDGIAACLKKFRMAITPYYASLIKSEDRQCPIRMQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EL + DP+ ++ SP+ G+ HRYPDR+LL + C +YCR C RR + G Sbjct: 82 VPNPKELVCTRGDMRDPLHEDVDSPVPGLTHRYPDRVLLLVTDCCSMYCRHCTRRRIAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q L + A +YI+ I +V+ +GGDP L+ ++L+ +LK LR IKHV+++RF Sbjct: 141 QNDRSLPKAQLDRAFSYIRSNPTIRDVVISGGDPFTLADEQLEYILKKLRAIKHVEVIRF 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI PEL L++ PV+I H NHP E + + AA++RLA AGI + +Q Sbjct: 201 GTRTPVVLPQRITPELCNMLEKY-HPVWINTHFNHPREITPASSAAVARLAKAGIPVNNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKGIND I+ L++ +++RI+PYYL+ DL+ G HFR ++ G +I+ +L+ Sbjct: 260 SVLLKGINDRAHIMKKLVQGLLKIRIRPYYLYQCDLSEGIGHFRTSVSTGIEIMENLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P Y++D PGG GK+ I + + G G + + V+ Y Sbjct: 320 TSGLAVPTYVIDAPGGGGKIPIGPNYLLSQGQGKTVLRNFEGKVYLY 366 >gi|308272545|emb|CBX29149.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.] Length = 425 Score = 471 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 128/351 (36%), Positives = 206/351 (58%), Gaps = 2/351 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + + + L + E+ D IK ++ +++TP A+L++ NP P+ R Sbjct: 67 WQLKNR-IQNYETLSTILTLSAEETDAIKTNGDNLPLSITPYYASLLDKTNPMHPLRRAV 125 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P + EL E EDP+G++ SP+ GIVHRYPDR+L + C YCR+C R MVG Sbjct: 126 VPVRAELCRSFGEAEDPLGEDADSPVPGIVHRYPDRVLFLVTDFCSTYCRYCTRSRMVGR 185 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + E AL YI+ + I +V+ +GGDPL L+ L+ +L L I+H++I+R Sbjct: 186 SSACHGGTSNWEKALNYIEANTGIRDVLLSGGDPLTLNDDALEWLLLRLCRIQHLEIVRI 245 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 ++VP+V PQRI L + LK P++I IH HP E + E A +RLA+AGI L SQ Sbjct: 246 GTKVPVVLPQRITSRLARMLKRY-HPLWINIHFMHPEEVTPETSTACTRLADAGIPLGSQ 304 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGINDD + + L +++R++PYYL+ D G+ HFR ++++G +I+ L+ Sbjct: 305 TVLLKGINDDVDTMKELYHRLLKIRVRPYYLYQCDPIIGSGHFRTSVKKGLEIIKGLRGH 364 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 SGL P +++D PGG GK+ + + + ++ +++ YP S Sbjct: 365 TSGLAVPNFVIDAPGGGGKIPLLPEYVLGRYGDEILLKNYEDLIFRYPDSS 415 >gi|320334582|ref|YP_004171293.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211] gi|319755871|gb|ADV67628.1| lysine-2,3-aminomutase [Deinococcus maricopensis DSM 21211] Length = 473 Score = 471 bits (1214), Expect = e-131, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 194/347 (55%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + S ++L + + + + +TP A+L++P +P P+ RQ Sbjct: 37 WQLKNR-INSVEELEEVLRLTDSERQG-ASADGIFRLDITPYFASLMDPEDPTCPVRRQV 94 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG Sbjct: 95 IPTHHELENFTSMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 154 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T + + L Y++ Q+ +V+ +GGDPL L+ K L +L LR I H++I+R Sbjct: 155 PTET-FKPDEYKLQLEYLRNTPQVRDVLLSGGDPLTLAPKVLGGLLAELRKIPHIEIIRI 213 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ P R+ EL L E PV++ IH NHP E + E A RL AG+ L +Q Sbjct: 214 GTRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVNHPKEITPEVAEACDRLTRAGVPLGNQ 272 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+ND P I+ LMR V++R++PYY++ DL G H R T+ +G +I+ SL+ Sbjct: 273 AVLLRGVNDHPVIMQKLMRELVKIRVRPYYIYQCDLVHGAGHLRTTVAKGLEIMESLRGH 332 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + G G + + + Y Sbjct: 333 TSGYSIPTYVVDAPGGGGKIPVMPNYVLAQGGGKVILRNFEGYIAAY 379 >gi|223940704|ref|ZP_03632543.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514] gi|223890631|gb|EEF57153.1| lysine 2,3-aminomutase YodO family protein [bacterium Ellin514] Length = 412 Score = 471 bits (1213), Expect = e-131, Method: Composition-based stats. Identities = 129/352 (36%), Positives = 205/352 (58%), Gaps = 4/352 (1%) Query: 1 MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 QL+++ +TS + L + E+ ++ ++A+TP NLI+P + N PI Q Sbjct: 46 WQLKNR-ITSLEQLQKLMPTLTPEEHAGTVLANSKLALAITPYFFNLIDPADENCPIRTQ 104 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 IP+ +E + E +DP G+++HSP+ G+VHRYPDR+L + C YCR+C R +V Sbjct: 105 VIPKVQETHTASWEMDDPCGEDSHSPVPGLVHRYPDRVLFLVTDRCASYCRYCTRSRLVS 164 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + G + E + YI++ + +V+ +GGDPL+LS +L+ +L LR I HV+ LR Sbjct: 165 NAAGYDFHP-EFEKQIEYIRKTPTVRDVLLSGGDPLLLSDDKLEYLLSQLRAIPHVEFLR 223 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +R+PI PQRI P L LK+ P++I+IH NHP E + E A+ RLA AGI L + Sbjct: 224 IGTRIPIFLPQRITPALCAMLKKY-HPLFISIHTNHPRELTTEVREALGRLAEAGIPLGN 282 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+ +NDD + L++ + R+KPYYL+ DL AG++H R ++ +G +I+ L+ Sbjct: 283 QSVLLRHVNDDLTTMRALVQKLLMCRVKPYYLYQCDLIAGSAHLRSSVRKGLEIMEGLRG 342 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 +G P Y++D PGG GKV ++ + I + + +YP + Sbjct: 343 HTTGYAIPQYVIDAPGGGGKVPVNPEYVLSRNADRVVIRNFEGKIFEYPEAA 394 >gi|116254324|ref|YP_770162.1| L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv. viciae 3841] gi|115258972|emb|CAK10081.1| putative L-lysine 2,3-aminomutase [Rhizobium leguminosarum bv. viciae 3841] Length = 350 Score = 471 bits (1212), Expect = e-131, Method: Composition-based stats. Identities = 201/345 (58%), Positives = 260/345 (75%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K + S DL A L+ ++E++ Y++ALTP I+ LI+ +P+DPIARQF+P Sbjct: 5 KPIKSVDDLMKAGLVAPADRVALEEVAARYAVALTPAISKLIDRADPDDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL I PEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 65 ELTIAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + +AA YI +IWEVI TGGDPL+LS +RL ++++ L I HV+I+RFH+RVP Sbjct: 125 LDAAAMQAAFDYIHSDEEIWEVILTGGDPLVLSSRRLGEIMEALAGITHVKIIRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP++I+ LI LK +GK VYIA+HANH E + EA AA +RL +AGI ++SQSVLLK Sbjct: 185 VVDPEKIDAALIAALKASGKTVYIALHANHVRELTPEARAACARLVDAGIAMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GTSHFR+TIEEGQ+IVA+L+ +ISGLC Sbjct: 245 GVNDDPDVLAKLMKAFVEIRVKPYYLHHPDLAPGTSHFRVTIEEGQEIVAALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 QP YILD+PGG+GK I ++ G+G Y +TD+ H YPP Sbjct: 305 QPAYILDIPGGHGKAVISGSAMRATGDGCYTVTDYRGGEHSYPPA 349 >gi|289524159|ref|ZP_06441013.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502815|gb|EFD23979.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 442 Score = 471 bits (1212), Expect = e-130, Method: Composition-based stats. Identities = 122/347 (35%), Positives = 199/347 (57%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL ++ +T L + E+ + + +A+TP A L++P++ N PI Q Sbjct: 23 WQLVNR-ITDIDTLSRVIALTPEEKKALNDDLLELRMAITPYYATLMDPNDINCPIRMQA 81 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E N E+ DP+ ++ ++P+ G VHRYPDR +L + C +YCRFC RR G Sbjct: 82 VPTSAERNTAEEDFHDPLAEDRYAPVPGFVHRYPDRGILLVTDQCSMYCRFCTRRRFAG- 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + S ++ +AA+ YI+ + +++ TGGDPL + + L+ +L +LR I HV+I+R Sbjct: 141 EIDRPKSREEIQAAIDYIERTPVLRDILVTGGDPLTMEDENLEWLLTSLRRIPHVEIIRI 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP V PQRI L+ LK+ P++I +H NHP E + + A++ LANAGI L +Q Sbjct: 201 GTRVPAVMPQRITNSLVTMLKKF-HPLWINVHFNHPKEITPHSARALNMLANAGIPLGNQ 259 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND P I L + R++PYY++ DL+ G SHFR ++ +G +I+ L+ Sbjct: 260 SVLLRGINDCPYIFKELFHKLLVNRVRPYYIYQCDLSRGISHFRTSVGKGIEIIEFLRGH 319 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +G+ P +++D PGG GK+ + + + G + + + Y Sbjct: 320 TTGMAVPTFVIDAPGGGGKIPVMPNYVLAQGERRIVLRNFEGTITVY 366 >gi|15807697|ref|NP_285351.1| hypothetical protein DR_A0027 [Deinococcus radiodurans R1] gi|6460574|gb|AAF12280.1|AE001862_106 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 492 Score = 470 bits (1211), Expect = e-130, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 199/347 (57%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + S ++L + + + + + +TP A+L++P +P P+ RQ Sbjct: 49 WQLKNR-INSVEELQEVLTLTESEYRG-ASAEGIFRLDITPYFASLMDPEDPTCPVRRQV 106 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +EEL ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG Sbjct: 107 IPTEEELQPFTSMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 166 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T + + EA L Y++ Q+ +V+ +GGDPL L+ K L ++L LR I+H++I+R Sbjct: 167 PTET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDPLTLAPKVLGRLLSELRKIEHIEIIRI 225 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ P R+ EL L E P+++ IH NHP E + E A RL AG+ L +Q Sbjct: 226 GTRVPVFMPMRVTQELCDTLAEH-HPLWMNIHVNHPKEITPEVAEACDRLTRAGVPLGNQ 284 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND P I+ L+R V++R++PYY++ DL G H R T+ +G +I+ SL+ Sbjct: 285 SVLLRGVNDHPVIMQKLLRELVKIRVRPYYIYQCDLVHGAGHLRTTVSKGLEIMESLRGH 344 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + + + + Y Sbjct: 345 TSGYSVPTYVVDAPGGGGKIPVAPNYVLSHSPEKLILRNFEGYIAAY 391 >gi|294496089|ref|YP_003542582.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219] gi|292667088|gb|ADE36937.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219] Length = 437 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 119/355 (33%), Positives = 200/355 (56%), Gaps = 6/355 (1%) Query: 1 MQLRHKT--LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIA 57 QL+H + + + L K E+ D++K+ + +++TP +LI+ + NDPI Sbjct: 29 WQLKHSIGDVDTFETLLGIKF-KAEEKDKLKQTLEKFPLSVTPYYLSLIDTDDFRNDPIF 87 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 Q P +EL+I ++ EDP+ ++ SP++GI HRYPDR+L + + C +YCR C R+ Sbjct: 88 LQAFPSPKELDIDEDDLEDPLSEDEDSPVEGITHRYPDRVLFHISNTCSMYCRHCTRKRK 147 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG ++ + L YI+ + +V+ +GGDP +L L +L LR I HV+I Sbjct: 148 VGD-VDSIPTRDAVSEGLEYIRNTPHVRDVLLSGGDPFMLPDAYLDWILTKLREIPHVEI 206 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R+P+V P R+ +L++ LK+ P++I H NHP E + + A+ +LA+AGI L Sbjct: 207 IRIGTRMPVVLPYRVTDDLVEILKKH-HPLWINTHFNHPREVTASSREALRKLADAGIPL 265 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL G+ND I+ +L+ V+ R++PYYL+ DL+ G SHFR + +G +I+ L Sbjct: 266 GNQTVLLSGVNDCHRIMKSLVHKLVQNRVRPYYLYQCDLSEGLSHFRTPVGKGIEIMEHL 325 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P Y++D P G GK+ + + + ++ ++ Y S Sbjct: 326 IGHTSGFAVPTYVIDAPHGGGKIPVMPSYLISWSTNRVILRNYEGVITSYKEPDS 380 >gi|297568546|ref|YP_003689890.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio alkaliphilus AHT2] gi|296924461|gb|ADH85271.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio alkaliphilus AHT2] Length = 443 Score = 470 bits (1210), Expect = e-130, Method: Composition-based stats. Identities = 126/355 (35%), Positives = 200/355 (56%), Gaps = 6/355 (1%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPN-DPIA 57 LRH K++ + + L N E+ E++E + +A+TP +LI+ N DP+ Sbjct: 33 WHLRHTIKSIDTVERLLN-TTFSPEKRRELEETIARFPMAITPHYFSLIDRENYEEDPVF 91 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ +P EL I E DP+ ++ SP+ GI HRYPDR+L + ++C +YCR C R+ Sbjct: 92 RQSVPSLSELKIGASEHSDPLAEDQDSPVTGITHRYPDRVLFHVSNLCAMYCRHCTRKRK 151 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG +V K A L YI++ I +V+ +GGDP +L + +L LR I+HV++ Sbjct: 152 VGD-VDSVPGKKTLAAGLDYIRQTPAIRDVLLSGGDPFLLGDDLIDWLLTELRAIEHVEV 210 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V PQRI P L++ LK+ P+++ H NHP E + + A++ LA+AGI L Sbjct: 211 IRIGTRTPVVLPQRITPRLVEILKKH-HPLWVNTHFNHPREITSRSRRALAMLADAGIPL 269 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLL G+ND P ++ L+ V R++PYYL+ DL+ G + FR + +G +I+ SL Sbjct: 270 GNQSVLLAGVNDCPRVIKRLVHKLVANRVRPYYLYQCDLSEGLASFRTPVGKGIEIIESL 329 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P Y++D PGG GK+ + + + + + ++ Y S Sbjct: 330 IGHTSGFAVPTYVIDAPGGGGKIPVMPNYLISWSTNKVVLRNFEGVITTYKEPDS 384 >gi|312126722|ref|YP_003991596.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor hydrothermalis 108] gi|311776741|gb|ADQ06227.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor hydrothermalis 108] Length = 409 Score = 469 bits (1207), Expect = e-130, Method: Composition-based stats. Identities = 128/346 (36%), Positives = 211/346 (60%), Gaps = 5/346 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ +TSA+ L + + +++ +I+++ Y A++P +LI+P++PN PI RQ Sbjct: 63 WQLKNR-ITSAKILKDLLNLDEKEAQQIEQVGKIYRFAISPYYLSLIDPNDPNCPIKRQS 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL + DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR +G Sbjct: 122 VPSSLELVEKGD--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRFIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R Sbjct: 179 ETDTHASLDDITDAIEYVAQNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQRI +L+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q Sbjct: 239 GTRAPVTLPQRITKDLVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ + Sbjct: 298 MVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 SG+ P YI++ P G GK I + + G + V + Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKDKVVFRNWEGEVFE 403 >gi|197121711|ref|YP_002133662.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K] gi|196171560|gb|ACG72533.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K] Length = 415 Score = 468 bits (1206), Expect = e-130, Method: Composition-based stats. Identities = 125/347 (36%), Positives = 193/347 (55%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q R + + + L + E+ + + + + +TP A L++P +P PI Q Sbjct: 69 WQQRERVIR-LEQLERVLRVTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQS 127 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P ELNIL + EDP+ + P+ GI HRYPDR+L H CPVYCR C R+ V Sbjct: 128 VPTMGELNILASDLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSD 187 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + E +LAYI + ++I +V+ +GGDPL LS RL +L LR I HV+I R Sbjct: 188 PT-SAAAKRQIEESLAYIAQHTEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRL 246 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQR+ + + L+ PVY+ H NHP E + EA A RLA+AG ++ +Q Sbjct: 247 GTRNLVTLPQRVTDDFVYMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQ 305 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLLKG+NDDP ++ L + +RI+PYY++ DLA G SHFR +E G +I+ +L+ Sbjct: 306 MVLLKGVNDDPAVVKELNHKLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGH 365 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P +++D P G GK+ ++ + + + + +Y Sbjct: 366 TSGLAVPQFVVDAPNGGGKIPVNPEYVVSHEGKRWVLRNFAGKQFEY 412 >gi|220916508|ref|YP_002491812.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954362|gb|ACL64746.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 415 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 125/347 (36%), Positives = 193/347 (55%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q R + + + L + E+ + + + + +TP A L++P +P PI Q Sbjct: 69 WQQRERVIR-LEQLERVLRVTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQS 127 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P ELNIL + EDP+ + P+ GI HRYPDR+L H CPVYCR C R+ V Sbjct: 128 VPTMGELNILASDLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSD 187 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + E +LAYI + ++I +V+ +GGDPL LS RL +L LR I HV+I R Sbjct: 188 PT-SAAAKRQIEESLAYIAQHTEIRDVVISGGDPLSLSDDRLDHILGRLRAIPHVEIFRL 246 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQR+ + + L+ PVY+ H NHP E + EA A RLA+AG ++ +Q Sbjct: 247 GTRNLVTLPQRVTDDFVYMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQ 305 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLLKG+NDDP ++ L + +RI+PYY++ DLA G SHFR +E G +I+ +L+ Sbjct: 306 MVLLKGVNDDPAVVKELNHKLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGH 365 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P +++D P G GK+ ++ + + + + +Y Sbjct: 366 TSGLAVPQFVVDAPNGGGKIPVNPEYVVSHEGKRWVLRNFAGKQFEY 412 >gi|189218034|ref|YP_001938676.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4] gi|189184892|gb|ACD82077.1| Lysine 2,3-aminomutase [Methylacidiphilum infernorum V4] Length = 397 Score = 468 bits (1205), Expect = e-130, Method: Composition-based stats. Identities = 135/349 (38%), Positives = 204/349 (58%), Gaps = 4/349 (1%) Query: 1 MQLRHKTLTSAQDLYN-ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 QL+++ L S + + LI E+ + + +LTP NLI+P NP+ P+ RQ Sbjct: 29 WQLKNR-LNSLEQIEQRLFLIPDERRGLMFAAKEKLAFSLTPYFFNLIDPFNPDCPLRRQ 87 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 IP+ EEL +P E DP G++ G+VHRYPDR+L + C YCR+C R +V Sbjct: 88 VIPRAEELVSMPYEMMDPCGEDKDMVAPGLVHRYPDRVLFLVTDRCATYCRYCTRSRIVS 147 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 L D + Y+++ ++I +V+ +GGDPL+LS RL+K+L+ LR I H++I+R Sbjct: 148 GVGSQKLEIDD-KLTFDYLKKHTEIRDVLISGGDPLLLSDGRLEKILRQLREIAHIEIIR 206 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +RVPI PQRI L + LK P++I IH+NHP E + EA A+ +LA+ GI L + Sbjct: 207 IGTRVPIFLPQRITESLCKVLKAY-HPLWINIHSNHPKELTLEAKTALEKLADTGIPLGN 265 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLKGINDDP+ + L+ V R++PYYL+ DL GT HFR+ I G +I+ L+ Sbjct: 266 QSVLLKGINDDPQTMLELVNKLVRCRVRPYYLYQCDLIQGTHHFRVPIRRGLEIMQKLRG 325 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 +G P Y++D PGG GK+ ++ + + ++ ++ YP Sbjct: 326 FTTGFAVPQYVVDGPGGGGKIPLNPDYVMGYYEDKVLLRNYEGKIYSYP 374 >gi|15889814|ref|NP_355495.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58] gi|15157746|gb|AAK88280.1| L-lysine 2,3-aminomutase [Agrobacterium tumefaciens str. C58] Length = 363 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 200/353 (56%), Positives = 268/353 (75%), Gaps = 1/353 (0%) Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 + R +T+ + + L A LI+ E ++ ++ ++ Y++A+TP + L++ H+P DPIARQ Sbjct: 8 WTMTRFETIKTPEALLEAGLIEAEALEGLRAVTQRYALAITPAVTGLMDSHDPQDPIARQ 67 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 F+P EL LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Sbjct: 68 FVPDLAELVHLPEERDDPIGDDAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVG 127 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 Q ++S ++ +AA AYI+E IWEVI TGGDPL+LS +RL ++K LR I HV+I+R Sbjct: 128 PQGNGMMSPEELDAAFAYIKENPAIWEVILTGGDPLVLSPRRLSDLMKRLRDIPHVKIVR 187 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 FH+RVP+VDP RI+ LI+ LK +GK Y+A+HANH E + A A +RL +AGI ++S Sbjct: 188 FHTRVPVVDPDRIDAPLIEALKASGKTTYVALHANHARELGDAARNACARLIDAGIAMVS 247 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLKGINDDP +LA+LMR+FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+ Sbjct: 248 QTVLLKGINDDPAVLADLMRSFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRG 307 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +SGLCQP Y+LD+PGG+GK I + +K +G Y ++D + H YPP +S Sbjct: 308 HVSGLCQPTYVLDIPGGHGKAMIGRNAAEKTRDGCYSVSDFNGNDHIYPPATS 360 >gi|312794434|ref|YP_004027357.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312181574|gb|ADQ41744.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 407 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 129/346 (37%), Positives = 210/346 (60%), Gaps = 5/346 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ L SA+ L + +++ +I+E++ Y A++P +LI+P +PN PI +Q Sbjct: 63 WQLKNRVL-SAKTLKELLNLDEKETQQIEEVAKAYRFAISPYYLSLIDPDDPNCPIKKQS 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G Sbjct: 122 VPSSLELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q Sbjct: 239 GTRAPVTLPQRITKELVDMLKKYP-PIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ +L+ + Sbjct: 298 MVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIENLRGR 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 SG+ P YI++ P G GK I + G G + + + Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPSYLLYFGKGKVVFRNWEGEMFE 403 >gi|312621465|ref|YP_004023078.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor kronotskyensis 2002] gi|312201932|gb|ADQ45259.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor kronotskyensis 2002] Length = 407 Score = 468 bits (1204), Expect = e-130, Method: Composition-based stats. Identities = 128/346 (36%), Positives = 209/346 (60%), Gaps = 5/346 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ +S + L + +++ ++I+E++ Y A++P +LI+P NPN PI +Q Sbjct: 63 WQLKNRVASS-KILKELLNLDEKEAEQIEEVAKSYRFAISPYYLSLIDPDNPNCPIKKQS 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E DP+ + + SP K I RYPDR+++K+ ++C ++CRFC RR ++G Sbjct: 122 VPSSFELIEKGE--LDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S D A+ Y+ + I +V+ TGGD L+LS + L +L++LR I HV+I+R Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLDWILRSLRQIPHVEIIRI 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A L++AG+ L +Q Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLSDAGVPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ + Sbjct: 298 MVLLNGVNNDKYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 SG+ P YI++ P G GK I + + G + + + Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKDKVVFRNWEGEMFE 403 >gi|222087704|ref|YP_002546241.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84] gi|221725152|gb|ACM28308.1| L-lysine 2,3-aminomutase [Agrobacterium radiobacter K84] Length = 350 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 200/346 (57%), Positives = 263/346 (76%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + + + DL A LI + ++ ++ Y+IALTP +A LI+ +P DPIARQF+P Sbjct: 5 RPIRTVDDLEQAGLIDSAEALSLEVVAERYAIALTPTVARLIDKADPADPIARQFVPDMA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + PEER DPI D+ +SP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 65 ELVVTPEERADPISDHAYSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L +AA AYI++ +IWEVI TGGDPL+LS +RL+++L+ L I+HV+I+RFH+RVP Sbjct: 125 LDGAALDAAFAYIRDHEEIWEVILTGGDPLVLSPRRLEEMLRQLADIEHVKIVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP +I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI+L+SQSVLLK Sbjct: 185 VVDPLKIDGALIAALKASGKTVYVALHANHPRELTAEARAACARLVDAGIVLVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA+LM+ FVE RIKPYYLHHPDLA GTSHFRLTI EGQ IVA+L+ +ISGLC Sbjct: 245 GVNDDPDVLASLMKAFVETRIKPYYLHHPDLAPGTSHFRLTIAEGQAIVAALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGG+GK I ++++G G Y ++D+ H YPP+ Sbjct: 305 QPTYILDIPGGHGKADIGKSAVRELGEGCYSVSDYRGGEHLYPPEG 350 >gi|86359621|ref|YP_471513.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42] gi|86283723|gb|ABC92786.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CFN 42] Length = 349 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 201/345 (58%), Positives = 257/345 (74%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K + S DL A L ++ ++ Y+I LTP I LI+ +PNDPIARQF+P Sbjct: 5 KPIKSVDDLVEAGLATPADRAALEAVTARYAITLTPEITRLIDRADPNDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q Sbjct: 65 ELVVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + EAA YI +IWEVI TGGDPL+LS +RL++++K L I HV+I+RFH+RVP Sbjct: 125 LDAAAMEAAFDYIGSHQEIWEVILTGGDPLVLSPRRLREIMKALANISHVKIVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI+++SQSVLLK Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTMEARAACARLVDAGIVMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GINDDP ILA+LM+ FVE R+KPYYLHHPDLA GT HFRLTIEEGQ+IVA+L+ +ISGLC Sbjct: 245 GINDDPAILADLMKAFVENRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVAALRGQISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 QP YILD+PGG+GK + ++ G+G Y ++D+ H YPP Sbjct: 305 QPTYILDIPGGHGKAVVSGSTVQATGDGCYSVSDYRGGEHSYPPA 349 >gi|209551368|ref|YP_002283285.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537124|gb|ACI57059.1| lysine 2,3-aminomutase YodO family protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 350 Score = 467 bits (1203), Expect = e-129, Method: Composition-based stats. Identities = 199/345 (57%), Positives = 259/345 (75%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K L SA DL A L+ ++E++ Y+IALTP + LI+ +P+DPIARQF+P Sbjct: 5 KPLKSADDLVMAGLVAPADRRALEEVAARYAIALTPDMTRLIDRADPDDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL ILPEER DPIGD+ HSP++GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 65 ELTILPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + +AA YI+ +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+RVP Sbjct: 125 LDAAAMQAAFDYIRGHEEIWEVILTGGDPLVLSPRRLRDIMEALADIAHVKIVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP +++ L+ LK +GK VY+A+HANH E + EA AA +RL +AGI ++SQSVLLK Sbjct: 185 VVDPDKVDAALVDALKASGKTVYVALHANHVRELTAEARAACARLIDAGIAMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTIEEGQ+IV+ L+ +ISGLC Sbjct: 245 GVNDDPDVLAALMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIEEGQRIVSQLRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 QP YILD+PGGYGK + ++ G+G Y ++D+ H YPP Sbjct: 305 QPTYILDIPGGYGKTVVSGSTVQARGDGCYSVSDYRGDEHSYPPA 349 >gi|190893895|ref|YP_001980437.1| L-lysine 2,3-aminomutase [Rhizobium etli CIAT 652] gi|190699174|gb|ACE93259.1| L-lysine 2,3-aminomutase protein [Rhizobium etli CIAT 652] Length = 350 Score = 466 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 197/346 (56%), Positives = 259/346 (74%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K + + DL A L + ++E++ Y+IALTPV+A LI+ +P+DPIARQF+P Sbjct: 5 KPIKTVDDLLQARLATPDDRAMLEEVAARYAIALTPVMARLIDRADPDDPIARQFVPDPA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + ER DPIGD HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q Sbjct: 65 ELTVATGERADPIGDYAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + +AA YI + +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+R+P Sbjct: 125 LDAAAMQAAFDYIADHQEIWEVILTGGDPLVLSPRRLRDIMEALAAIAHVKIVRFHTRIP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK Sbjct: 185 VVDPEKIDAALIAALKASGKTVYVALHANHPRELTGEARAACARLVDAGIAMISQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LMR FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC Sbjct: 245 GVNDDPDVLAELMRAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGG+GK I I+ G+G Y ++D+ H YPP Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYTVSDYRGGEHSYPPAG 350 >gi|94985093|ref|YP_604457.1| hypothetical protein Dgeo_0988 [Deinococcus geothermalis DSM 11300] gi|94555374|gb|ABF45288.1| Lysine 2,3-aminomutase [Deinococcus geothermalis DSM 11300] Length = 483 Score = 466 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 121/347 (34%), Positives = 192/347 (55%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + S ++L + + + + +TP A+L++P +P P+ RQ Sbjct: 41 WQLKNR-INSVEELEEVIRLTPSERAG-ASAEGIFRLDITPYFASLMDPEDPTCPVRRQV 98 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG Sbjct: 99 IPTHHELEPFTAMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 158 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T + L Y++ Q+ +V+ +GGDPL L+ K L +L LR I+H++I+R Sbjct: 159 PTET-FKPDEYRLQLEYLRNTPQVRDVLLSGGDPLTLAPKVLAGLLSELRKIEHIEIIRI 217 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ P RI EL L E P+++ IH NHP E + E A RL AG+ L +Q Sbjct: 218 GTRVPVFLPMRITQELCDVLAEH-HPLWMNIHVNHPKEITPEVAEACDRLTRAGVPLGNQ 276 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND P I+ L+R V++R++PYY++ DL G H R T+ +G +I+ SL+ Sbjct: 277 SVLLRGVNDHPVIMQKLVRELVKIRVRPYYIYQCDLVHGAGHLRTTVAKGLEIMESLRGH 336 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + + + + Y Sbjct: 337 TSGYSVPTYVVDAPGGGGKIPVAPNYVLSHSPEKLILRNFEGYIAAY 383 >gi|86158970|ref|YP_465755.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775481|gb|ABC82318.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C] Length = 375 Score = 466 bits (1201), Expect = e-129, Method: Composition-based stats. Identities = 125/347 (36%), Positives = 192/347 (55%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q R + + + L + E+ + + + + +TP A L++P +P PI Q Sbjct: 29 WQQRERVIR-LEQLERVLRVTPEEREAAVKTEAEFHMGITPYYAALMDPEDPTCPIRLQS 87 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P ELNIL + EDP+ + P+ GI HRYPDR+L H CPVYCR C R+ V Sbjct: 88 VPTMGELNILASDLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSD 147 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + E +LAYI + +I +V+ +GGDPL LS RL +L LR I HV+I R Sbjct: 148 PT-SAAAKRQIEESLAYIAQHPEIRDVVISGGDPLSLSDDRLDYILGRLRAIPHVEIFRL 206 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQR+ + + L+ PVY+ H NHP E + EA A RLA+AG ++ +Q Sbjct: 207 GTRNLVTLPQRVTDDFVYMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQ 265 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLLKG+NDDP ++ L + +RI+PYY++ DLA G SHFR +E G +I+ +L+ Sbjct: 266 MVLLKGVNDDPAVVKELNHKLLLMRIRPYYIYQCDLARGISHFRTPVEAGIRIIEALRGH 325 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P +++D P G GK+ ++ + + + + +Y Sbjct: 326 TSGLAVPQFVVDAPNGGGKIPVNPEYVVSHEGKRWVLRNFAGERFEY 372 >gi|312135958|ref|YP_004003296.1| lysine 2,3-aminomutase yodo family protein [Caldicellulosiruptor owensensis OL] gi|311776009|gb|ADQ05496.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor owensensis OL] Length = 407 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 131/346 (37%), Positives = 212/346 (61%), Gaps = 5/346 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +PN PI +Q Sbjct: 63 WQLKNR-ITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPNCPIKKQS 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G Sbjct: 122 VPSSFELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R Sbjct: 179 ETDTHASLDDITDAIEYVAKNPHIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQ+I EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q Sbjct: 239 GTRAPVTLPQKITKELVDMLKKY-HPIYINTHFNHPREITKESKRACEMLADSGIPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL G+N+D I+ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ + Sbjct: 298 MVLLNGVNNDKYIVRKLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 SG+ P YI++ P G GK I + + G G + V + Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKGKVVFRNWEGEVFE 403 >gi|326792528|ref|YP_004310349.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427] gi|326543292|gb|ADZ85151.1| lysine-2,3-aminomutase [Clostridium lentocellum DSM 5427] Length = 437 Score = 466 bits (1200), Expect = e-129, Method: Composition-based stats. Identities = 119/350 (34%), Positives = 193/350 (55%), Gaps = 6/350 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIA 57 Q+++ T+ + + I Q +I+ + +A++P +L++ HN NDPI Sbjct: 30 WQVKN-TIRKVETVEMILGITFSDSQKFDIERTLAQFPMAISPYYLSLVDIHNYDNDPIF 88 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q P ELNI P + DP+ + SP I HRYPDR+L + +VC +YCR C R+ Sbjct: 89 KQCFPSVLELNISPCDMSDPLHEEVDSPAPCITHRYPDRVLFHVSNVCGMYCRHCTRKRK 148 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 VG ++ S + + YI+ I +V+ +GGDP +LS + +LK + I HV++ Sbjct: 149 VGDL-DSIPSKESLLQGIEYIKNTPVIRDVLLSGGDPFLLSDTMIDWLLKEITAIDHVEV 207 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R +R P+V P RI EL+ LK+ +++ H NH E + EA AA+ +L AGI L Sbjct: 208 VRIGTRTPVVLPFRITDELVSILKKYD-NIWLNTHFNHSREMTTEAGAALKKLKLAGIPL 266 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +QSVLLKGIND I+ +L+ + ++PYYL+ DL+ G HFR I G +I+ +L Sbjct: 267 GNQSVLLKGINDCTYIMKDLLHKLILNGVRPYYLYQCDLSEGLEHFRTNIGTGIEIMENL 326 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 + SG P Y++D PGG GK+ + + + + + ++ ++ Y Sbjct: 327 RGHTSGFAIPTYVIDAPGGGGKIPVMPNYLVSWSSNKVVLRNYEGVITTY 376 >gi|226355793|ref|YP_002785533.1| L-lysine 2,3-aminomutase [Deinococcus deserti VCD115] gi|226317783|gb|ACO45779.1| putative L-lysine 2,3-aminomutase [Deinococcus deserti VCD115] Length = 493 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 124/347 (35%), Positives = 195/347 (56%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + S +L + + + + +TP A+L++P +P P+ RQ Sbjct: 41 WQLKNR-INSVAELEEVIRLTDSERQG-ASAEGIFRLDITPYFASLMDPEDPTCPVRRQV 98 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG Sbjct: 99 IPTHHELTPFTSMMEDSLAEDKHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 158 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T + + EA L Y++ Q+ +V+ +GGDPL L+ K L ++L LR I+H++I+R Sbjct: 159 PSET-FNPAEYEAQLNYLRNTPQVRDVLLSGGDPLTLAPKVLGRLLAELRKIEHIEIVRI 217 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ P R+ EL L E PV++ IH NHP E + E A RL AG+ L +Q Sbjct: 218 GTRVPVFMPMRVTQELCDVLSE-NHPVWMNIHVNHPREITPEVAEACDRLTRAGVPLGNQ 276 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND P I+ L+R V++R++PYY++ DL G H R T+ +G +I+ SL+ Sbjct: 277 SVLLRGINDHPVIMQKLVRELVKIRVRPYYIYQCDLVHGAGHLRTTVSKGLEIMESLRGH 336 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + + + + Y Sbjct: 337 TSGYSVPTYVVDAPGGGGKIPVAPNYVLSHSPEKLILRNFEGYIAAY 383 >gi|158521904|ref|YP_001529774.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus oleovorans Hxd3] gi|158510730|gb|ABW67697.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus oleovorans Hxd3] Length = 454 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 126/350 (36%), Positives = 199/350 (56%), Gaps = 3/350 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + + L + E++ E+ + +TP +L++ P P+ R Sbjct: 90 WQLQNR-ICTPTALSRFLDLSLEEMGVFAELKTKLPLGVTPYYMSLLHGSAPGHPLRRTV 148 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E LP E DP+G+ H+ + G+VHRYPDR+LL + C YCR+C R +VG Sbjct: 149 VPTVHEFFKLPGEENDPLGEEGHTQMPGLVHRYPDRVLLLVSGFCSTYCRYCTRSRLVGR 208 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 K S E A+ YI+ I +V+ +GGDPL LS +L +L +R I HV+I+R Sbjct: 209 GK-IYPSRSRLEKAIDYIRNTPTIRDVLLSGGDPLTLSDAKLDWILGRIREIPHVEIIRI 267 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 ++VP V PQR+ PEL++ L++ P+++++H HP E + EA A + LA+AGI L SQ Sbjct: 268 GTKVPAVLPQRVTPELVRVLRKY-HPLWMSLHFTHPEECTPEAYDACAMLADAGIPLGSQ 326 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGINDD + LM + +R+KPYYL+ D AG+ HFR ++ G +I+ L+ Sbjct: 327 TVLLKGINDDVATMKALMHQMMRMRVKPYYLYQCDPVAGSGHFRTSVARGLEIIRGLRGH 386 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG P Y++D PGG GK+ + + + + + ++ N + YP Sbjct: 387 TSGYAVPTYVIDAPGGGGKIPLLPNYVVSSSDAGVVLENYENRLFTYPNP 436 >gi|312877848|ref|ZP_07737796.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795395|gb|EFR11776.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor lactoaceticus 6A] Length = 407 Score = 465 bits (1198), Expect = e-129, Method: Composition-based stats. Identities = 130/346 (37%), Positives = 209/346 (60%), Gaps = 5/346 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ L SA+ L + +++ +I+E++ Y A++P LI+P +PN PI +Q Sbjct: 63 WQLKNRVL-SAKTLKELLNLNEKETQQIEEVAKVYRFAISPYYLLLIDPDDPNCPIKKQS 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G Sbjct: 122 VPSSFELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A LA++GI L +Q Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLADSGIPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ + Sbjct: 298 MVLLNGVNNDKFVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 SG+ P YI++ P G GK I + G G + + + Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPSYLLYFGKGKVVFRNWEGEMFE 403 >gi|283781148|ref|YP_003371903.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM 6068] gi|283439601|gb|ADB18043.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM 6068] Length = 436 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 119/351 (33%), Positives = 204/351 (58%), Gaps = 3/351 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q R++ + + Q ++ ++ + + + + +TP +L++ + N P+ R Sbjct: 88 WQSRNR-IRTLQQFEKMLVLSSDERQALVDGGSMLPVGITPYYMSLLDREDANQPLRRTV 146 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E P E +DP+G++ HSP G+VHRYPDR+LL L C YCR+C R +VG Sbjct: 147 VPVTGEFLRTPGEADDPLGEDGHSPTPGLVHRYPDRVLLLALDFCSTYCRYCTRSRVVG- 205 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + S + E A YI++ I +V+ +GGDPL LS +L +L LR I H++ +R Sbjct: 206 HGEIMPSEQRLEKAFEYIRQTPTIRDVLISGGDPLALSEDKLDWILGRLRSIPHLEFVRI 265 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +++P V PQRI P+LI+ K+ P++++IH HP E + EA A +RLA+AGI L SQ Sbjct: 266 GTKMPAVLPQRITPQLIRVFKKYS-PLWMSIHFLHPDECTPEANQACARLADAGIPLGSQ 324 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+ND + + +L+ + +R++PYY++ D +G++HFR ++ +G +I+ L+ Sbjct: 325 TVLLKGVNDRVDTMKDLVHRLLMMRVRPYYIYQCDPISGSAHFRTSVSKGLEIIEGLRGH 384 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 +G P Y++D PGG GK+ + + + + ++ V+ YP + Sbjct: 385 TTGYAVPTYVIDAPGGGGKIPLQPNYVVGRDGNDLLLRNYEGQVYRYPDPT 435 >gi|146295299|ref|YP_001179070.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145408875|gb|ABP65879.1| glutamate 2,3-aminomutase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 407 Score = 465 bits (1197), Expect = e-129, Method: Composition-based stats. Identities = 130/346 (37%), Positives = 211/346 (60%), Gaps = 5/346 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +P+ PI +Q Sbjct: 63 WQLKNR-ITSAKILKELLNLDEKEAQQIEEVAKIYRFAISPYYLSLIDPSDPHCPIKKQS 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E DP+ + + SP K I RYPDR+++K+ ++C ++CRFC RR ++G Sbjct: 122 VPSSFELIEKGE--LDPMDEEHTSPTKIITQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEILEWILRSLRQIPHVEIIRI 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQRI EL+ LK+ P+Y+ H NHP E ++E+ A LA+ GI L +Q Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYVNTHFNHPREITKESKRACEMLADGGIPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ + Sbjct: 298 MVLLNGVNNDKYVVRRLNQQLLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 SG+ P YI++ P G GK I + + G G + V + Sbjct: 358 TSGMAIPTYIINAPKGKGKTPIMPNYLLYFGKGKVVFRNWEGEVFE 403 >gi|270307988|ref|YP_003330046.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS] gi|270153880|gb|ACZ61718.1| lysine 2,3-aminomutase [Dehalococcoides sp. VS] Length = 439 Score = 464 bits (1195), Expect = e-128, Method: Composition-based stats. Identities = 129/344 (37%), Positives = 194/344 (56%), Gaps = 3/344 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q +++ +TS ++ + E+ ++ +S + ++ TP +LI+ N NDP+ Q Sbjct: 59 WQFKNR-VTSVAEIARFFHLSAEEYRDMDSVSAVFPLSATPYYLSLIDFDNVNDPVKLQL 117 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL DP+G+ + S + G+VHRYPDR+++ L +CPV CR C R+ Sbjct: 118 MPDTAELCFDAYCCSDPLGEEHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R Sbjct: 177 NGGWVHTQAEIDAMLAYIRQNPVIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRI 236 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI+ EL L + G +++ H NHP E +EE+ A RL AG+ + +Q Sbjct: 237 GTRYPVVLPQRIDDELCNMLSKYG-TIWLNTHYNHPNEITEESRRACDRLVRAGVPVNNQ 295 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKGIND I +L + +++PYYL D GT HF TIE G I+ L+ Sbjct: 296 SVLLKGINDSVAIQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTTIETGVGIIEGLRGY 355 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 SGL P Y++DLPGG GK+ + + Y I ++ + Sbjct: 356 TSGLAVPNYVIDLPGGGGKITVQPDYVLDKQADEYIIRNYKGDI 399 >gi|218682609|ref|ZP_03530210.1| lysine 2,3-aminomutase YodO family protein [Rhizobium etli CIAT 894] Length = 350 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 194/346 (56%), Positives = 257/346 (74%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K + S DL A L ++E++ Y+IALTP + LI+ +P+DPIARQF+P Sbjct: 5 KPIKSVDDLVTAGLAAPADRAALEEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q Sbjct: 65 ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + +AA YI+ +IWEVI TGGDPL+LS +RL+++++ L I HV+I+RFH+RVP Sbjct: 125 LDAAAMQAAFDYIRGHQEIWEVILTGGDPLVLSPRRLREIMEALAEIAHVKIVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP +I+ I LK +GK VY+A+HANH E + EA AA +RL +AGI+++SQSVLLK Sbjct: 185 VVDPGKIDDASIAALKASGKTVYVALHANHVGELTAEARAACARLVDAGIVMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LM+ VE+R+KPYYLHHPDLA GT+HFRLT+EEGQ IVA+L+ +ISGLC Sbjct: 245 GVNDDPDVLAELMKAGVEIRVKPYYLHHPDLAPGTAHFRLTLEEGQSIVAALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGGYGK + ++ G G Y ++D+ H YPP + Sbjct: 305 QPTYILDIPGGYGKAVVSASAVRARGEGCYSVSDYRGDEHCYPPAN 350 >gi|153004182|ref|YP_001378507.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. Fw109-5] gi|152027755|gb|ABS25523.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. Fw109-5] Length = 413 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 125/347 (36%), Positives = 195/347 (56%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q R + +T L + ++ + E + + +TP A L++P +P+ PI Q Sbjct: 67 WQQRER-VTRLDQLEKVIHLTADERRAVIESDAEFHMGITPYYAALMDPDDPSCPIRLQS 125 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL I P + EDP+ + P+ GI HRYPDR+L H CPVYCR C R+ V Sbjct: 126 VPTMGELTIAPADLEDPLAEERDMPVPGITHRYPDRVLFYTTHNCPVYCRHCTRKRKVSD 185 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + E +LAYI +I +V+ +GGDPL LS +RL +L LR I HV+I R Sbjct: 186 PT-SAAAKRQIEESLAYISAHPEIRDVVISGGDPLSLSDERLDYILGRLRAIPHVEIFRL 244 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQR+ + + L+ PVY+ H NHP E + EA A RLA+AG ++ +Q Sbjct: 245 GTRNLVTLPQRVTDDFVHMLRRH-HPVYVNTHFNHPKECTAEAFEAARRLADAGCVIGNQ 303 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLLKG+ND+PE++ L + +RI+PYY++ DLA G SHFR +E G +I+ L+ Sbjct: 304 MVLLKGVNDEPELVKELNHKLLLMRIRPYYIYQCDLAKGISHFRTPVETGIRIIEHLRGH 363 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P +++D P G GK+ ++ + + + + ++ ++Y Sbjct: 364 TSGLAVPHFVVDAPQGGGKIPVNPNYVVSHEGKRWVLRNYAGKEYEY 410 >gi|222530236|ref|YP_002574118.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor bescii DSM 6725] gi|222457083|gb|ACM61345.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor bescii DSM 6725] Length = 407 Score = 464 bits (1194), Expect = e-128, Method: Composition-based stats. Identities = 125/346 (36%), Positives = 211/346 (60%), Gaps = 5/346 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + SA+ L + + +++ +I+++ Y A++P +LI+P++PN PI +Q Sbjct: 63 WQLKNR-IASAKILKDLLNLDEKEAQQIEQVGKIYRFAISPYYLSLIDPNDPNCPIKKQS 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G Sbjct: 122 VPSSLELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R Sbjct: 179 ETDTHASLDDITDAIEYVAQNPNIRDVLITGGDALMLSDEVLEWILRSLRQIPHVEIIRI 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQRI EL+ LK+ P+YI H NHP E ++++ A L++AG+ L +Q Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKDSKRACEMLSDAGVPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL G+N+D ++ L + +++R+KPYY+ HP GTSHF +TIEEG +I+ SL+ + Sbjct: 298 MVLLNGVNNDMYVVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVTIEEGMEIIESLRGR 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 SG+ P YI++ P G GK I + + G + + + Sbjct: 358 TSGMAVPTYIINAPKGKGKTPIMPNYLLYFGKDKVVFRNWEGEMFE 403 >gi|39935581|ref|NP_947857.1| hypothetical protein RPA2515 [Rhodopseudomonas palustris CGA009] gi|39649434|emb|CAE27956.1| putative L-lysine 2,3-aminomutase [Rhodopseudomonas palustris CGA009] Length = 363 Score = 463 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 179/349 (51%), Positives = 244/349 (69%), Gaps = 4/349 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP EE Sbjct: 14 TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPSAEE 73 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+ Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLAEIMAELAAIEHVKIVRFHTRLPV 193 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP RI P+L++ L+ GK ++A+HANHP E + +A AA +R+ +AGI ++SQSVLL+G Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTGDARAACARIVDAGIPMVSQSVLLRG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGGYGK + + + + Y + D+ VH YPP S Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGRDSRYRVADYCGEVHLYPPLS 362 >gi|227824114|ref|YP_002828087.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii NGR234] gi|227343116|gb|ACP27334.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium fredii NGR234] Length = 350 Score = 463 bits (1193), Expect = e-128, Method: Composition-based stats. Identities = 210/347 (60%), Positives = 266/347 (76%) Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 H+ L +A DL A LI + I +++ Y+IA++PV+ANLI+ +P DPI+RQF+P Sbjct: 4 HRPLRTAGDLVEAGLIDASAEEAIARVASRYAIAISPVVANLIDRTDPQDPISRQFVPDA 63 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 EL + PEER DPIGD HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 64 AELTLTPEERADPIGDGAHSPVSGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGLG 123 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 L+ + +AA+AYI E +IWEVI TGGDPL+LS +RLQ++L+ L I HV+++RFH+RV Sbjct: 124 TLTPSELDAAIAYISEHPEIWEVILTGGDPLVLSPRRLQEILERLDAIAHVKVVRFHTRV 183 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V+P RI+ +LI LK +GK Y+A+HANHP E + EA AA +RL +AGI+++SQSVLL Sbjct: 184 PVVEPHRIDADLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLL 243 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 KG+NDDPE+LA LMR FVE RIKPYYLHHPDLA GTSHFRLTIE+GQ +VASL+ ++SGL Sbjct: 244 KGVNDDPEVLAELMRAFVETRIKPYYLHHPDLAPGTSHFRLTIEKGQALVASLRGRVSGL 303 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 CQP YILD+PGG+GK I I+ G G Y +TD H H YPPKS Sbjct: 304 CQPTYILDIPGGHGKAVISASAIEAEGGGCYTVTDFHGNEHAYPPKS 350 >gi|268315713|ref|YP_003289432.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus DSM 4252] gi|262333247|gb|ACY47044.1| lysine 2,3-aminomutase YodO family protein [Rhodothermus marinus DSM 4252] Length = 396 Score = 463 bits (1191), Expect = e-128, Method: Composition-based stats. Identities = 127/350 (36%), Positives = 197/350 (56%), Gaps = 5/350 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+RH+ + +A++L + E+ I+ + +TP A+L++P +PN PI RQ Sbjct: 18 WQMRHR-IHTAEELSRWIRLTDEERRAIEATRGVFRWNITPYYASLMDPEDPNCPIRRQV 76 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P+ EEL DP+ + HSP+K ++H Y DR+ + C +YCR+C R+ MVG Sbjct: 77 VPRLEELAPDLIGVMDPLEEVAHSPVKNLIHNYRDRVAFCVTSECAIYCRYCLRKRMVGD 136 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 ++ + +AA+ YI +I +V+ TGGDPL LS L +L LR I HV+I+R Sbjct: 137 -AAFMMRKAELQAAIDYIAAHPEIRDVLLTGGDPLTLSETHLAWILDQLRAIPHVEIIRI 195 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R+P+ P RI PEL + L+ P++I H NHP E + +A AI RL AGI + +Q Sbjct: 196 GTRMPVKLPYRITPELCRLLERY-HPLWINTHFNHPKELTPDAAEAIDRLLRAGIPVGNQ 254 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GINDD + L V +R++PYYL+ L GT+HFR IE+G I+ +L+ + Sbjct: 255 TVLLRGINDDVATMKALCEGLVRMRVRPYYLYQAQLIGGTAHFRTPIEKGMAIMRALQGR 314 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 +G P Y+LD P YGKV +D ++ + ++ P Sbjct: 315 TTGFAIPKYVLDTP--YGKVPLDGSYVRGRAGDYVIVETPRGVLWAEPNP 362 >gi|218674354|ref|ZP_03524023.1| L-lysine 2,3-aminomutase protein [Rhizobium etli GR56] Length = 350 Score = 462 bits (1190), Expect = e-128, Method: Composition-based stats. Identities = 197/346 (56%), Positives = 256/346 (73%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K L S DL A L + E++ Y+IALTP + LI+ +P+DPIARQF+P Sbjct: 5 KPLKSVDDLLQAGLATLGDRAMLDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q Sbjct: 65 ELTVAPEERADPIGDHTHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + + A YI +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+R+P Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRIP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK Sbjct: 185 VVDPEKIDAALIDALKASGKTVYVALHANHPSELTSEARAACARLVDAGIAMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGG+GK I I+ G+G Y ++D+ H YPP Sbjct: 305 QPAYILDIPGGHGKAVISESVIRATGDGCYSVSDYRGGEHFYPPAG 350 >gi|224368437|ref|YP_002602600.1| KamA2 [Desulfobacterium autotrophicum HRM2] gi|223691153|gb|ACN14436.1| KamA2 [Desulfobacterium autotrophicum HRM2] Length = 435 Score = 462 bits (1189), Expect = e-128, Method: Composition-based stats. Identities = 128/352 (36%), Positives = 212/352 (60%), Gaps = 5/352 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ + + + L + +++ + + +++TP +LI+P++P+ P+ + Sbjct: 85 WQIANR-VRTHERLGRMISLSEDEF--MVNSESQLPLSITPYYLSLISPNDPDQPLRKSV 141 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E + E +DP+G+++ SP+ G+VHRYPDR+L LL C YCR+C R +VG Sbjct: 142 VPTVHEWVKMGCESDDPLGEDHQSPVPGLVHRYPDRVLFLLLDFCSTYCRYCTRSRVVG- 200 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 G + E A+ YI + I +V+ +GGDPL LS RL+ VL LR I HV+I+R Sbjct: 201 HGGILAGRARWEKAIEYIAKTPTIRDVLLSGGDPLTLSDDRLEWVLSRLRKIPHVEIIRI 260 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 ++V V PQRI P+L++ LK P+++++H HP E + EA A + LA+AGI L SQ Sbjct: 261 GTKVTTVLPQRITPKLVKMLKRY-HPLWMSLHFTHPDECTPEAYKACTMLADAGIPLGSQ 319 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGIND+ E +A+LM +++R++PYYL+ D G+ HFR +I++G +I+ L+ Sbjct: 320 TVLLKGINDNVETMADLMHQLMKMRVRPYYLYQCDPITGSGHFRTSIDKGLEIIHGLRGF 379 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SG P Y++D PGG GK+ + +K+ + +T++ + YP S Sbjct: 380 TSGYAVPTYVVDAPGGGGKIPLMPDYVKEHTRETLVLTNYEDKTFCYPDPVS 431 >gi|325972392|ref|YP_004248583.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy] gi|324027630|gb|ADY14389.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy] Length = 421 Score = 461 bits (1188), Expect = e-128, Method: Composition-based stats. Identities = 123/348 (35%), Positives = 203/348 (58%), Gaps = 4/348 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H+ +T+ DL + + + +K + ++TP +LI+P++P + R Sbjct: 70 WQLFHR-ITTYADLCRFLTPTESEREALKSADTLFPFSVTPYYLSLIDPNDPTSALRRTV 128 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EE + E DP+ + + + ++G+VHRYPDR+L C YCR+C R MVG Sbjct: 129 IPSIEESYVGKGESADPLAEEHTTAVQGLVHRYPDRVLFLTTSFCSTYCRYCTRSRMVGG 188 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + K E A+ YI+E +++ +V+ +GGDPL LS + + +L + I HV+++R Sbjct: 189 HTEAL--QKHWEGAINYIKEHTEVRDVVISGGDPLTLSDEMIDYLLDQVTSIDHVEMVRI 246 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 ++VP+V PQRIN L+ L++ KP+Y++IHA HP E ++E++ A + LA++G++L SQ Sbjct: 247 GTKVPMVMPQRINESLLAILRKY-KPIYMSIHATHPDELTKESVRACNALADSGVVLGSQ 305 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+ND +L +L + R+KPYYL D +G+ HFR T+++G+ ++ L+ Sbjct: 306 TVLLKGVNDSVSVLTDLFHKLLRARVKPYYLFQCDPISGSEHFRTTVDKGKALMQGLRGF 365 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG P Y++D PGG GKV I + + ++ V YP Sbjct: 366 TSGYAIPQYVIDTPGGGGKVPILPQYEVGQDDEHLYLRNYEGKVFTYP 413 >gi|325293926|ref|YP_004279790.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3] gi|325061779|gb|ADY65470.1| L-lysine 2,3-aminomutase [Agrobacterium sp. H13-3] Length = 354 Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 196/349 (56%), Positives = 264/349 (75%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R +T+ + + L A LIK E +++++ ++ Y++A+T +A+L++ +P DPIARQF+P Sbjct: 3 RLETIKTPEALVEAGLIKTEALEDVRAVTQRYALAITSTMADLMDSRDPQDPIARQFVPD 62 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 EL LPEER+DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG Q Sbjct: 63 LVELVHLPEERDDPIGDSAHSPVHGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPQGN 122 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 ++S ++ +AA YI+ IWEVI TGGDPL+LS +RL ++ L+ + HV+I+RFH+R Sbjct: 123 GMMSPEELDAAFDYIKANPAIWEVILTGGDPLVLSARRLSDLMTRLKDVPHVKIVRFHTR 182 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+VDP+RI+ LI+ LK +GK Y+A+HANH E + A +A +RL +AGI ++SQ+VL Sbjct: 183 VPVVDPERIDGPLIESLKASGKTTYVALHANHARELGQAARSACARLIDAGIAMVSQTVL 242 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 LKGINDD ILA LMR FVE RIKPYYLHHPDLA GTSHFRLTIEEGQ+IV++L+ +SG Sbjct: 243 LKGINDDSAILAELMRAFVENRIKPYYLHHPDLAPGTSHFRLTIEEGQRIVSALRGHVSG 302 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 LCQP Y+LD+PGG+GK I + +K +G Y I+D + H YPP +S Sbjct: 303 LCQPTYVLDIPGGHGKATIGPNAAEKTRDGCYSISDFNGNDHIYPPPAS 351 >gi|20807659|ref|NP_622830.1| lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4] gi|20516205|gb|AAM24434.1| Lysine 2,3-aminomutase [Thermoanaerobacter tengcongensis MB4] Length = 419 Score = 460 bits (1185), Expect = e-127, Method: Composition-based stats. Identities = 127/348 (36%), Positives = 197/348 (56%), Gaps = 4/348 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ ++ + L + +E+I+ IK +S Y A++P A+L++P NP PI + Sbjct: 70 WQIRNR-ISDVETLKKIVNLSEEEIENIKRVSTRYRWAISPYYASLMDPDNPFCPIRMRA 128 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +EL DP+ + SP I RYPDR+++ + + C ++CR C RR +G Sbjct: 129 IPSIKELTDK-YGVPDPMAEEYTSPAPLITRRYPDRLIINVTNQCGMFCRHCQRRRNIG- 186 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + +D EAAL YI+ +I +V+ TGGDPL L +++ +L L I HV+I R Sbjct: 187 EVDYPAKHEDIEAALEYIRNNPEIRDVLITGGDPLTLEDEKIDWILSELDKIPHVEIKRI 246 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 + P+ PQRI EL + L + P+YI NHP E +EEA A +LA AG+ L +Q Sbjct: 247 GTAAPVTFPQRITDELCKILTKH-LPLYINTQFNHPKEVTEEAKEACFKLARAGVALGNQ 305 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGIN+DP ++ L + + +KPYY+ H GT+HF T+++G +I+ L+ Sbjct: 306 AVLLKGINNDPHVMKKLNHELLRIMVKPYYIFHAKSVQGTTHFVTTVQDGLEIMEQLRGY 365 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SGL P+YI++ P G+GK I + VG I + V +YP Sbjct: 366 TSGLAIPWYIINAPEGHGKTPIVPQYLLMVGKEYVLIRNWEGKVFEYP 413 >gi|218461424|ref|ZP_03501515.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Kim 5] Length = 350 Score = 459 bits (1181), Expect = e-127, Method: Composition-based stats. Identities = 195/346 (56%), Positives = 256/346 (73%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K L + DL A L+ + E++ Y+IALTP + LI+ +P+DPIARQF+P Sbjct: 5 KPLKNVDDLLQAGLVLPGHRAILDEVAARYAIALTPAVTRLIDRADPDDPIARQFVPDAA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + PEER DPIGD+ HSP++GIVHRYPDR+LLK +H+CPVYCRFCFRREMVG Q Sbjct: 65 ELTVAPEERADPIGDHAHSPVEGIVHRYPDRVLLKAVHICPVYCRFCFRREMVGPQGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + + A YI +IWEVI TGGDPL+LS +RL+ +++ L I HV+I+RFH+RVP Sbjct: 125 LDAAAMQKAFDYIAGHQEIWEVILTGGDPLVLSARRLRDIMEALAAIAHVKIVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP++I+ LI LK +GK VY+A+HANHP E + EA AA +RL +AGI ++SQSVLLK Sbjct: 185 VVDPEKIDLALIAALKASGKTVYVALHANHPRELTSEARAACARLVDAGIAMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LM+ FVE+R+KPYYLHHPDLA GT HFRLTI+EGQ+IVA+L+ +ISGLC Sbjct: 245 GVNDDPDVLAELMKAFVEIRVKPYYLHHPDLAPGTGHFRLTIDEGQRIVAALRGRISGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGG+GK I ++ G+G Y ++D+ H YP Sbjct: 305 QPAYILDIPGGHGKAVISESVVRATGDGCYSVSDYRGGEHSYPTAG 350 >gi|325111083|ref|YP_004272151.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305] gi|324971351|gb|ADY62129.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305] Length = 457 Score = 458 bits (1179), Expect = e-127, Method: Composition-based stats. Identities = 116/352 (32%), Positives = 199/352 (56%), Gaps = 3/352 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q +++ + S + + + + +++ + +TP +L++P +P P+ + Sbjct: 108 WQAQNR-VRSLEQFERMLELAPFEREALQQGGTMLPVGVTPYYMSLLDPTDPYQPLRKTV 166 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E P E +DP+G++ HSP+ G+VHRYPDR+LL L C YCR+C R +VG Sbjct: 167 LPSTAEFVRTPGEADDPLGEDGHSPVPGLVHRYPDRVLLLALDFCSTYCRYCTRSRVVG- 225 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 S E Y+Q Q+ +V+ +GGDPL L ++L +L+ LR I H++ +R Sbjct: 226 HGEIAPSDARLEKIFQYLQNSPQVRDVLISGGDPLALKDEKLAYILRRLREIPHIEFVRI 285 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +++P V PQRI PEL+ ++ PV++++H HP E + E+ A RLA+AGI L SQ Sbjct: 286 GTKMPAVLPQRITPELVNAIRPY-HPVWMSLHFLHPDECTPESKQACERLADAGIPLGSQ 344 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+ND+ E + L + R++PYYL+ D +G++HFR ++ +G +I++ L+ Sbjct: 345 TVLLKGVNDNVETMKQLTHKLLMNRVRPYYLYQCDPISGSAHFRTSVAKGLEIISGLRGH 404 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +G P Y++D PGG GK+ + + +G + + + YP + Sbjct: 405 TTGYAVPTYVIDAPGGGGKIPLQPDAVVGREDGHLVLRNFEGKLFRYPDPDA 456 >gi|289432513|ref|YP_003462386.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT] gi|288946233|gb|ADC73930.1| lysine 2,3-aminomutase YodO family protein [Dehalococcoides sp. GT] Length = 439 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 127/344 (36%), Positives = 192/344 (55%), Gaps = 3/344 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q +++ +TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q Sbjct: 59 WQFKNR-VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQL 117 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+ Sbjct: 118 IPDTAELCFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R Sbjct: 177 NGGWVHTQAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRI 236 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +Q Sbjct: 237 GTRYPVVLPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQ 295 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKGIND + L + +++PYYL D GT HF IE G I+ L+ Sbjct: 296 SVLLKGINDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGY 355 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 SGL P Y++DLPGG GK+ I + Y I ++ + Sbjct: 356 TSGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGEI 399 >gi|147669246|ref|YP_001214064.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1] gi|146270194|gb|ABQ17186.1| L-lysine 2,3-aminomutase [Dehalococcoides sp. BAV1] Length = 439 Score = 458 bits (1178), Expect = e-127, Method: Composition-based stats. Identities = 127/344 (36%), Positives = 192/344 (55%), Gaps = 3/344 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q +++ +TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q Sbjct: 59 WQFKNR-VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQL 117 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+ Sbjct: 118 IPDTAELCFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R Sbjct: 177 NGGWVHTQAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSIPHVEIIRI 236 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +Q Sbjct: 237 GTRYPVVLPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQ 295 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKGIND + L + +++PYYL D GT HF IE G I+ L+ Sbjct: 296 SVLLKGINDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGY 355 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 SGL P Y++DLPGG GK+ I + Y I ++ + Sbjct: 356 TSGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGEI 399 >gi|299133809|ref|ZP_07027003.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2] gi|298591645|gb|EFI51846.1| lysine 2,3-aminomutase YodO family protein [Afipia sp. 1NLS2] Length = 357 Score = 457 bits (1177), Expect = e-126, Method: Composition-based stats. Identities = 179/348 (51%), Positives = 243/348 (69%), Gaps = 4/348 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L + L+ +E + ++ ++ Y+IA+TP +A LI+P++PNDPIARQ++P +E Sbjct: 10 TLRRPAELADQKLVSREALPALEAVAARYAIAITPAVAALIDPNDPNDPIARQYVPSTQE 69 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L I P ER DPIGDN SP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K + L Sbjct: 70 LQIEPVERVDPIGDNARSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKDSAL 129 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S A+ YI+ +IWEVI TGGDPL+LS +RL++++ L I HV+I+RFH+RVP+ Sbjct: 130 SDHAYAKAIDYIRTHPEIWEVILTGGDPLMLSTRRLKEIVNDLAAIPHVKIIRFHTRVPV 189 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP R+ E+ + L ++A+HANHP E + EA AA +RL + GI ++SQSVLL+G Sbjct: 190 ADPARMTDEVAEALHHPDVTTWVALHANHPRELTAEARAACARLIDRGIPMVSQSVLLRG 249 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND E L LMR FVE RIKPYYLHH DLA GTSH R T+EEG+ ++ L+ +SGLCQ Sbjct: 250 VNDTAETLTALMRAFVECRIKPYYLHHGDLAPGTSHLRTTLEEGEALMRQLRGHVSGLCQ 309 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGS----YCITDHHNIVHDYPPK 350 P Y+LD+PGGYGK+ + + + +G + D+ VH YPP Sbjct: 310 PDYVLDIPGGYGKIPVGPAYLSQQRDGERMQPRRLVDYCGGVHSYPPA 357 >gi|302392039|ref|YP_003827859.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501] gi|302204116|gb|ADL12794.1| L-lysine 2,3-aminomutase [Acetohalobium arabaticum DSM 5501] Length = 401 Score = 456 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 131/347 (37%), Positives = 207/347 (59%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL++ ++T+A +L I +Q +EIKE + + +++TP A+LI+ + PI Q Sbjct: 22 WQLKN-SITTADELQQYFDIDDQQAEEIKEAAKIFPMSITPYYASLIDFDDELCPIKLQA 80 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +PQKEEL E EDP+ + SP+ G+ HRYPDR+LL + + C ++CR C R+ VG Sbjct: 81 VPQKEELEEYEYEMEDPLHEEEDSPVPGLTHRYPDRVLLMVTNYCSMFCRHCTRKRKVGD 140 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T +A + YI+ Q+ +V+ +GGDPL+L +L+K++ L+ I HV+I+R Sbjct: 141 GN-TQDDFDQIQAGIEYIKNNPQVRDVLLSGGDPLLLDLDKLEKIIARLKEIPHVEIVRL 199 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SRVP+V PQRI+ ELI LK+ P++I H NH E + + A+++LA+ G L +Q Sbjct: 200 GSRVPVVLPQRIDDELIARLKKYS-PLWINTHFNHKKEITSRSKKALAKLADNGFPLGNQ 258 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+ IND P ++ +LM V R++PYYL+ DL+ G HFR +I G +I+ SL Sbjct: 259 TVLLRNINDSPAVMEDLMHKLVANRVRPYYLYQCDLSRGIEHFRTSISTGIEIIESLIGH 318 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ I + + + + ++ + Y Sbjct: 319 TSGFAVPRYVVDAPGGGGKIPISPNYVISSSSQKTILRNYEGDIVAY 365 >gi|209885154|ref|YP_002289011.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans OM5] gi|209873350|gb|ACI93146.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Oligotropha carboxidovorans OM5] Length = 357 Score = 456 bits (1175), Expect = e-126, Method: Composition-based stats. Identities = 177/347 (51%), Positives = 240/347 (69%), Gaps = 3/347 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L NL+ ++ + ++ ++ Y+IA+TP +A LI+P++PNDPIARQ++P +E Sbjct: 11 TLRQPAELAAHNLVSQDALQGLEAVAKRYAIAITPAVAELIDPNDPNDPIARQYVPSPQE 70 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L ER DPIGD HSP++GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L Sbjct: 71 LQSETIERVDPIGDRAHSPVEGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKETAL 130 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S A+ YI+ +IWEVI TGGDPL+LS +RL+++ L I HV+I+RFH+RVPI Sbjct: 131 SDAAYTKAIDYIRTHPEIWEVILTGGDPLMLSARRLKEITADLAAIPHVRIVRFHTRVPI 190 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP+R+ E+ L+ ++A+HANHP E + A AA +RL + GI L+SQSVLL+G Sbjct: 191 ADPERVTDEVADALRHPDVTTWVAVHANHPRELTPTARAACARLIDRGIPLVSQSVLLRG 250 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND E L LMR FVE RIKPYYLHH DLA GT+H R ++EEG+ ++ L+ +SGLCQ Sbjct: 251 VNDTVETLTALMRAFVECRIKPYYLHHGDLAPGTAHLRTSLEEGEALMRKLRGYVSGLCQ 310 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350 P Y+LD+PGG+GK+ + + G G + D+ VH YPP+ Sbjct: 311 PDYVLDIPGGFGKIPVGPVYLSPEGAGPTQRRRLLDYCGEVHVYPPE 357 >gi|169830385|ref|YP_001716367.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis audaxviator MP104C] gi|169637229|gb|ACA58735.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis audaxviator MP104C] Length = 420 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 132/347 (38%), Positives = 206/347 (59%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL ++ +T+ +L N + E+ ++ +A+TP A+L++P NP DPI +Q Sbjct: 24 WQLANR-VTTVDELRNLINLTPEEEQGVRRCLETLRMAITPYYASLMDPDNPEDPIRKQA 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E DP+ + SP+ GI HRYPDR+LL L C +YCR C RR + G Sbjct: 83 VPLAAELQFGLAESRDPLAEEVDSPVPGITHRYPDRVLLLLTDQCAMYCRHCTRRRLAG- 141 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + L +AAL YI++ + I +V+ +GGD L+L+ RL +L++LR I HV+I+R Sbjct: 142 KTDRALPPARIKAALEYIRKTTAIRDVLLSGGDSLLLAEDRLGGILESLRAIDHVEIIRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI PEL L+ PVY+ +H NHP E + EA A LA+AG+ L +Q Sbjct: 202 GTRTPVVLPQRITPELCALLRRF-HPVYVNMHFNHPKEVTPEAAEACRMLADAGLPLANQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+ND P ++ +LM + + +R++PYYL+ DL+ G HFR T+ +G +I+ L+ Sbjct: 261 TVLLRGVNDCPYVIKDLMHSLLRIRVRPYYLYQCDLSPGLEHFRTTVAQGIEIIELLRGH 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P Y++D PGG GK+ + + + ++ ++ Y Sbjct: 321 TSGLAVPTYVVDAPGGGGKIPVAPQYMISQSERMVILRNYEGVITAY 367 >gi|73748466|ref|YP_307705.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1] gi|73660182|emb|CAI82789.1| lysine 2,3-aminomutase [Dehalococcoides sp. CBDB1] Length = 439 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 127/344 (36%), Positives = 192/344 (55%), Gaps = 3/344 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q +++ +TS ++ + E+ ++ +S + ++ TP +L++ N NDP+ Q Sbjct: 59 WQFKNR-VTSVAEIARFFHLSAEEYRDMDTVSAVFPLSATPYYLSLVDFDNVNDPVKLQL 117 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+ Sbjct: 118 IPDTAELCFDAHCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R Sbjct: 177 NGGWVHTQAEIDAMLAYIRQNQAIRDVIISGGDPLTLSTSRLESVLSALRSISHVEIIRI 236 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI+ EL L + G P+++ H NHP E ++E+ A RL AG+ + +Q Sbjct: 237 GTRYPVVLPQRIDDELCSMLSKYG-PIWLNTHYNHPNEITDESRQACDRLVRAGVPVNNQ 295 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKGIND + L + +++PYYL D GT HF IE G I+ L+ Sbjct: 296 SVLLKGINDSLPVQKALCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGY 355 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 SGL P Y++DLPGG GK+ I + Y I ++ + Sbjct: 356 TSGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGEI 399 >gi|255994192|ref|ZP_05427327.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989] gi|255993860|gb|EEU03949.1| L-lysine 2,3-aminomutase [Eubacterium saphenum ATCC 49989] Length = 426 Score = 456 bits (1174), Expect = e-126, Method: Composition-based stats. Identities = 115/347 (33%), Positives = 204/347 (58%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ L +A ++ + +++ +I +I + + + +TP A+L++ ++P P+ Q Sbjct: 33 WQVANR-LGTADEIAEVINLTEQEKADITKILDGFRVGITPYYASLMDENDPMCPVRMQA 91 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E + + DP+ ++ SP G+ HRYPDR+L + C +YCR C RR + G Sbjct: 92 VPTILEAHRSEADLLDPLHEDEDSPAPGLTHRYPDRVLFLVTDQCSMYCRHCTRRRLAG- 150 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + S +D +A +AYI++ Q+ +V+ +GGD L++ L+ V+K LR I HV+++R Sbjct: 151 ETDGARSIEDIDACIAYIKKTPQVRDVLLSGGDALLIDDDVLEYVIKNLRDIPHVEVVRI 210 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+V PQRI PEL++ L++ PV++ H NH E ++ + AA++ LA+AGI L +Q Sbjct: 211 GSRTPVVCPQRITPELVKMLRKY-HPVWLNTHFNHKREVTDTSRAALALLADAGIPLGNQ 269 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND P + L+ V+ R++PYY++ DL+ G HFR + +G +I+ L+ Sbjct: 270 SVLLRGLNDCPHKMRELVHEMVKNRVRPYYIYQCDLSLGIEHFRTPVSKGIEIIEGLRGH 329 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P +++D PGG GK + + + ++ ++ Y Sbjct: 330 TSGYAVPTFVVDAPGGGGKTPVMPQYVISQTPHKVILRNYEGVITTY 376 >gi|57234545|ref|YP_181370.1| radical SAM domain-containing protein [Dehalococcoides ethenogenes 195] gi|57224993|gb|AAW40050.1| radical SAM domain protein [Dehalococcoides ethenogenes 195] Length = 439 Score = 456 bits (1173), Expect = e-126, Method: Composition-based stats. Identities = 128/344 (37%), Positives = 195/344 (56%), Gaps = 3/344 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q +++ +TS ++ + E+ +++ +S + ++ TP +L++ N NDP+ Q Sbjct: 59 WQFKNR-VTSVTEIARFFHLSAEEYRDMEAVSAVFPLSATPYYLSLVDFDNVNDPVKCQL 117 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P ELN DP+ + + S + G+VHRYPDR+++ L +CPV CR C R+ Sbjct: 118 MPDTAELNFDTRCCSDPLEEAHSSVVPGLVHRYPDRVVMVLTDICPVLCRHCTRKREW-K 176 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 G V + + +A LAYI++ I +VI +GGDPL LS RL+ VL LR I HV+I+R Sbjct: 177 NGGWVHTQAEIDAMLAYIRQHQVIRDVIISGGDPLTLSTPRLESVLSALRSIPHVEIIRI 236 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+V PQRI+ EL L + G P+++ H NHP E +EE+ A RL AG+ + +Q Sbjct: 237 GTRYPVVLPQRIDDELCNMLSKYG-PIWLNTHYNHPNEITEESRQACDRLVRAGVPVNNQ 295 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKGIND + +L + +++PYYL D GT HF IE G I+ L+ Sbjct: 296 SVLLKGINDSVSVQKSLCHKLLMSKVRPYYLFQCDNVQGTEHFHTPIETGVGIIEGLRGY 355 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 SGL P Y++DLPGG GK+ I + Y I ++ + Sbjct: 356 TSGLAVPNYVIDLPGGGGKITIQPDYVLDKQADEYIIRNYKGDI 399 >gi|254463955|ref|ZP_05077366.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales bacterium Y4I] gi|206684863|gb|EDZ45345.1| lysine 2,3-aminomutase YodO family protein [Rhodobacterales bacterium Y4I] Length = 360 Score = 455 bits (1172), Expect = e-126, Method: Composition-based stats. Identities = 119/351 (33%), Positives = 197/351 (56%), Gaps = 3/351 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 +R++ + S + L + + + + + +TP A+L+ +P++P+ R IP Sbjct: 1 MRNR-IRSQEALSRIFDLSDGEQEALARHQGGLPVGITPYYASLMGLDDPDEPLRRTHIP 59 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 +E LP E DP+G+++ +P+ G+VHRYPDR+L C YCR+C R MVG Sbjct: 60 VGQEYLQLPGEAGDPLGEDHDTPVPGLVHRYPDRVLFLATGTCSTYCRYCTRSRMVGQAG 119 Query: 123 GTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 G S + AL YI ++ +V+ +GGDPL ++ +L +L LR I HV+ +R Sbjct: 120 GEYQFSVSQWDRALDYIAAHPEVRDVLLSGGDPLTIADDKLDYLLGRLRAIPHVEFIRLG 179 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +++PIV P R+ +L++ LK P++++IH HP E + EA A RLA+AGI L SQ+ Sbjct: 180 AKMPIVLPMRVTRDLVRMLKRH-HPLWMSIHVTHPAELTPEATEACKRLADAGIPLGSQT 238 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKGIND +IL + + + R++PYYL+ D G++HFR + +G +I+ L+ Sbjct: 239 VLLKGINDSVDILKPMYQALLMRRVRPYYLYQCDPITGSAHFRTPVAKGLEIIEGLRGHT 298 Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +G P +++D PGG GK+ + + + + NI++ YP Sbjct: 299 TGYAVPQFVIDAPGGGGKIPLLPDYVAGRDGSDLILRNFENILYRYPDPGG 349 >gi|217976642|ref|YP_002360789.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris BL2] gi|217502018|gb|ACK49427.1| lysine 2,3-aminomutase YodO family protein [Methylocella silvestris BL2] Length = 363 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 192/349 (55%), Positives = 250/349 (71%), Gaps = 1/349 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 LR KTL SA DL A L + EI+ + Y IA+TP IA LI+ PNDPIARQF+P Sbjct: 13 LRAKTLRSADDLVEAGLASARRRAEIESVGETYPIAVTPAIAALIDRDAPNDPIARQFVP 72 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 EL+ PE+ DPIGD +SP++G+VHRYPDR+LLKLL VCPVYCRFCFRR+MVG K Sbjct: 73 DIAELSPRPEDLADPIGDEAYSPVEGVVHRYPDRVLLKLLLVCPVYCRFCFRRDMVGPGK 132 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 LS + +AALAYI +IWEVI TGGDP LS +RL ++++ L I+HV+I+R H+ Sbjct: 133 SAHLSPEALDAALAYIAADPRIWEVILTGGDPFALSPRRLAEIMERLAAIEHVRIVRVHT 192 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 RVP VDP I+ LI LK++GK +Y+A+HANHP E + EA AA +RL +AGI ++SQSV Sbjct: 193 RVPCVDPDAIDAALIAALKKSGKTIYVALHANHPRELTSEARAACARLIDAGIPMVSQSV 252 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LL G+NDD E L+ LMR FVE R+KPYYLHH DLA G +HFR+ IE+G++++ L+ ++S Sbjct: 253 LLAGVNDDVETLSALMRGFVEARVKPYYLHHLDLAPGVAHFRVDIEKGRELMQQLRGRLS 312 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVG-NGSYCITDHHNIVHDYPPK 350 GLCQP Y+LD+PGG+GK I I+ G NG + + D+ H YPP+ Sbjct: 313 GLCQPAYMLDVPGGHGKSPIGPDFIEPAGANGVFRVRDYQGATHLYPPQ 361 >gi|78358081|ref|YP_389530.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220486|gb|ABB39835.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 527 Score = 455 bits (1171), Expect = e-126, Method: Composition-based stats. Identities = 124/351 (35%), Positives = 199/351 (56%), Gaps = 4/351 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q ++ +TS L + +E+ +A+TP A +PHNP P+ R Sbjct: 156 WQYANR-ITSLGVLGTMLGLSEEE-AGAGTGLAALPLAVTPYYAAQFDPHNPAHPLRRTM 213 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE ++ P E DP+G+++HSP+ G+VHRYPDR+L C YCR+C R VG Sbjct: 214 VPTVEEWSLNPGESADPLGEDSHSPVPGLVHRYPDRVLFLATDSCSAYCRYCTRSRRVGK 273 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 S + AA+ YI+ ++ +V+ +GGDPL ++ L +L LR I HV+ +R Sbjct: 274 PCAGSASRRRWPAAIEYIENHPEVRDVLISGGDPLTMTDSALNHLLSQLRRIPHVEFIRI 333 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 ++ PIV PQRI P L++ L+ P++++IH HP E + EA A++RLA+ GI L SQ Sbjct: 334 GTKAPIVMPQRITPALVRMLRRY-HPLFMSIHCTHPDELTPEASQALNRLADGGIPLGSQ 392 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGIND+ + LM+ ++ R++PYYL+H D G++HFR I +G +I+ ++ Sbjct: 393 TVLLKGINDNVPTMTALMQGLLKNRVRPYYLYHCDPVQGSAHFRTPIYKGVEIIRGMRGF 452 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH-DYPPK 350 +G P Y++D PGG GK+ + ++ + ++ ++ Y P Sbjct: 453 TTGYAVPTYVVDAPGGGGKIPLMPDYVQGYDGEELVMRNYEGGLYRSYDPA 503 >gi|15964028|ref|NP_384381.1| hypothetical protein SMc00355 [Sinorhizobium meliloti 1021] gi|307301174|ref|ZP_07580936.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti BL225C] gi|307321075|ref|ZP_07600480.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti AK83] gi|15073204|emb|CAC41712.1| Lysine 2,3-aminomutase [Sinorhizobium meliloti 1021] gi|306893247|gb|EFN24028.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti AK83] gi|306903630|gb|EFN34217.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti BL225C] Length = 350 Score = 454 bits (1169), Expect = e-126, Method: Composition-based stats. Identities = 199/346 (57%), Positives = 264/346 (76%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + + +A++L +A L+ +EQ + I +++ Y++A++P IA L++ +PNDPIARQF+P Sbjct: 5 RAIRTARELADAGLVGREQEEAISRVASRYAVAISPTIARLVDRDDPNDPIARQFVPDMA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL ++PEER DPIGD HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG + Sbjct: 65 ELTLMPEERADPIGDGAHSPVAGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ + +AALAYI + +IWEVI TGGDPL+LS +RL ++ L I HV+++RFH+RVP Sbjct: 125 LTPAELDAALAYIAGRPEIWEVILTGGDPLVLSPRRLGDIMVRLAEIDHVKVVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V+P R++ LI LK +GK Y+A+HANHP E + EA AA +RL +AGI+++SQSVLLK Sbjct: 185 VVEPDRVDAGLIAALKSSGKATYVALHANHPRELTAEARAAAARLIDAGIVMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP++LA LMR FVE RIKPYYLHHPDLA GT HFRL+IEEGQ +VASL+ ++SGLC Sbjct: 245 GVNDDPDVLAALMRAFVETRIKPYYLHHPDLAPGTGHFRLSIEEGQALVASLRGRVSGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGG+GK + I+ G G Y +TD HDYPPK Sbjct: 305 QPAYILDIPGGHGKAVVSAGAIEAEGGGCYTVTDFRGNRHDYPPKG 350 >gi|150398662|ref|YP_001329129.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae WSM419] gi|150030177|gb|ABR62294.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium medicae WSM419] Length = 350 Score = 454 bits (1169), Expect = e-125, Method: Composition-based stats. Identities = 195/346 (56%), Positives = 264/346 (76%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +T+ + +DL A LI +E+ + I ++ Y++A++P I+ L++ +P+DPIARQF+P Sbjct: 5 RTIRTPRDLVEAGLIGREREEAISRVTASYAVAISPAISRLVDRDDPDDPIARQFVPDMA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL ++PEER DPIGD+ HSP+ GIVHRYPDR+LLK +HVCPVYCRFCFRREMVG + Sbjct: 65 ELAVMPEERADPIGDSTHSPVTGIVHRYPDRVLLKAVHVCPVYCRFCFRREMVGPEGLGT 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ + + A+AYI +IWEVI TGGDPL+LS +RL ++++ L I+HV+++RFH+RVP Sbjct: 125 LTPAELDRAIAYISGHQEIWEVILTGGDPLVLSPRRLGEIMERLAKIEHVKVVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V+P R++ LI LK +GK Y+A+HANHP E + A AA +RL +AGI+++SQSVLLK Sbjct: 185 VVEPDRVDAPLIAALKGSGKATYVALHANHPRELTVAARAAAARLIDAGIVMVSQSVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP+ILA LMR FVE R+KPYYLHHPDLA GTSHFRL+IEEGQ +VASL+ ++SGLC Sbjct: 245 GVNDDPDILAELMRAFVETRVKPYYLHHPDLAPGTSHFRLSIEEGQALVASLRGRVSGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP YILD+PGG+GK + +I+ G G Y +TD H YPPK Sbjct: 305 QPAYILDIPGGHGKSVVSASSIEAEGGGCYTVTDFRGNRHAYPPKG 350 >gi|300088094|ref|YP_003758616.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527827|gb|ADJ26295.1| lysine 2,3-aminomutase YodO family protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 431 Score = 453 bits (1166), Expect = e-125, Method: Composition-based stats. Identities = 126/344 (36%), Positives = 198/344 (57%), Gaps = 4/344 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH+ +T+ ++L + + IK ++ + +A+TP +LINP + DPI RQ Sbjct: 51 WQFRHR-ITTVEELSRYLPLSVRERTRIKLVTAEFPMAITPYYLSLINPADAKDPIRRQA 109 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL REDP+ +++HS + G+VHRYPDR L+ L +CP+ CR C R+ Sbjct: 110 VPSVHELTGEAG-REDPLEEHSHSVVPGLVHRYPDRALMVLTDICPMLCRHCTRKREW-R 167 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + G V +S +A + YI Q+ ++I +GGDPL LS +RL++VL LR I HV+I+R Sbjct: 168 KGGWVQNSTRVKAMVDYIGRTPQVRDIIISGGDPLTLSTRRLEEVLAALRAIPHVEIIRI 227 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R+P+V PQRI+ EL + L + P+++ H NHP E + EA AA RL AG+ + +Q Sbjct: 228 GTRLPVVLPQRIDVELCRMLSKYS-PIWVNTHFNHPGEITPEAAAACDRLLRAGVQVNNQ 286 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND NL + + ++PYYL D GT H +E G +I+ ++ Sbjct: 287 SVLLRGVNDTVATQLNLCHSLLRAMVRPYYLFQCDQVRGTEHLWTPVETGLRIIEGMRGH 346 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 SGL P Y++DLP G GK+ + + + + ++ + Sbjct: 347 TSGLAIPNYVIDLPDGRGKIPLSPNYVISHTKHELTVRNYEGHI 390 >gi|170738726|ref|YP_001767381.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp. 4-46] gi|168193000|gb|ACA14947.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium sp. 4-46] Length = 356 Score = 451 bits (1160), Expect = e-125, Method: Composition-based stats. Identities = 178/349 (51%), Positives = 244/349 (69%), Gaps = 3/349 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 + +TL L A L+ + + ++ +++ Y++A+TP +A+LI P D I RQF+P Sbjct: 1 MSRRTLRDPASLVEAGLVPRAALPALERVASRYAVAVTPAMADLIET--PEDGIGRQFLP 58 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 + EEL+ P ER DPIGD H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG Sbjct: 59 RAEELDAAPGERADPIGDAAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPDG 118 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 LS +AALAY+ + +IWEV+ TGGDP +LS +RL+++ L HV++LR H+ Sbjct: 119 MGALSEAQLDAALAYVAARPEIWEVVVTGGDPFLLSPRRLERIGAALAATDHVRVLRLHT 178 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 RVP V+P+R++ L+ LK G+ V++A+HANHP EF+ A AAI+RL +AGI L+SQSV Sbjct: 179 RVPAVEPERVDAALVAALKRFGRAVFVALHANHPGEFTPAARAAIARLVDAGIPLVSQSV 238 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LL+G+NDDPE LA LMR FVE R+KPYYLHH DLA GT HFR ++ GQ ++ L+ ++S Sbjct: 239 LLRGVNDDPETLAALMRAFVENRVKPYYLHHGDLAPGTGHFRTSLPVGQALMRGLRGRVS 298 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 GLCQP Y+LD+PGG+GKV + ++ G + +TD H YPP+ Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPAYLEPR-PGGFTVTDPEGRAHAYPPEG 346 >gi|222106966|ref|YP_002547757.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4] gi|221738145|gb|ACM39041.1| L-lysine 2,3-aminomutase [Agrobacterium vitis S4] Length = 349 Score = 451 bits (1160), Expect = e-124, Method: Composition-based stats. Identities = 193/342 (56%), Positives = 252/342 (73%), Gaps = 1/342 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 KT+ + ++L L+ E E+ ++ Y+IA+TP + LI+P++P DPIA QF+PQ Sbjct: 6 KTVKTVRELVETGLVAAETGPELDAVAARYAIAITPAMLALIDPNDPTDPIAAQFVPQAG 65 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P ER DPIGD+ HSP++GIVHRYPDR+LLK++H CPVYCRFCFRREMVG + Sbjct: 66 ELVHQPVERADPIGDHAHSPVEGIVHRYPDRVLLKVVHSCPVYCRFCFRREMVGPDGDGL 125 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS +AA+ YI++ IWEVIFTGGDPL+LS +RL+ +L+ L I HV+I+RFHSRVP Sbjct: 126 LSGPALDAAITYIRDHKDIWEVIFTGGDPLVLSPRRLRSILQQLGTIDHVRIIRFHSRVP 185 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP RI+ +LI L+ +GK YIAIHANHP E + +A AA ++L AG LLSQ+VLLK Sbjct: 186 VADPARIDKDLIDALQASGKTTYIAIHANHPRELTPQARAASAKLLQAGFALLSQTVLLK 245 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDD +LA+LMR+FV++RI+PYYLHHPDLA GT HFRL+I EGQ IV++L +SGLC Sbjct: 246 GVNDDAGVLADLMRSFVDMRIRPYYLHHPDLAPGTGHFRLSIAEGQAIVSALHGHLSGLC 305 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 QP Y+LD+PGG+GK ID I K G+ Y +TD H H Y Sbjct: 306 QPTYVLDIPGGHGKAPIDASQISKEGD-HYLVTDFHGHHHIY 346 >gi|260893262|ref|YP_003239359.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4] gi|260865403|gb|ACX52509.1| lysine 2,3-aminomutase YodO family protein [Ammonifex degensii KC4] Length = 427 Score = 450 bits (1159), Expect = e-124, Method: Composition-based stats. Identities = 123/348 (35%), Positives = 195/348 (56%), Gaps = 5/348 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 L+++ +TS + L + +E+ + I+++ Y A++P +L+ +P+ PI RQ Sbjct: 74 WHLKNR-ITSVEVLEKLIPLTQEEKEAIRQVERVYRWAVSPYYLSLM-GEDPSCPIRRQA 131 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL DP+ + SP GI RYPDR+++ + + C +YCR C RR +G Sbjct: 132 LPSAAELEDEVG-SLDPMAEEWTSPAPGITRRYPDRLIINVTNRCAMYCRHCQRRRNIG- 189 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + E AL YI++ +I +V+ TGGD L+LS L +L L I HV+I R Sbjct: 190 EVDRDRTRWELEEALEYIRQNKEIRDVLLTGGDALLLSDSVLDWLLTELDRIPHVEIKRI 249 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ PQRI L + L + P+Y+ NHP E ++EA AA RLA AG++L +Q Sbjct: 250 GTRVPVTLPQRITDNLCRILAKHP-PIYLNTQFNHPREITKEAKAACDRLAEAGVVLGNQ 308 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+N+ P I+ L + +++R++PYYL L GT+HF IEEG +I+ L+ Sbjct: 309 AVLLRGVNNHPFIMRKLNQELLKIRVRPYYLFQAKLVKGTTHFVTPIEEGIEIMEYLRGY 368 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SGL P YI++ P G GK+ I + + + N + YP Sbjct: 369 TSGLAVPTYIINAPQGLGKIPILPQYLLAIDEDHVVLRTWENKIVRYP 416 >gi|220921877|ref|YP_002497178.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium nodulans ORS 2060] gi|219946483|gb|ACL56875.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium nodulans ORS 2060] Length = 356 Score = 449 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 178/348 (51%), Positives = 244/348 (70%), Gaps = 3/348 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 + +TL L A L+ ++ E++ ++ Y++A+TP +A LI P D I RQF+P Sbjct: 1 MSRRTLRDPAALAAAGLVPAARLPELERVAARYAVAVTPDMAELI--EAPEDGIGRQFLP 58 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 EEL+ P ER DPIGDN H+PL GIVHRYPDR+LLK LHVCPVYCRFCFRRE+VG + Sbjct: 59 SAEELDTAPGERADPIGDNAHAPLPGIVHRYPDRVLLKPLHVCPVYCRFCFRREVVGPKG 118 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 L + +AALAYI + +IWEV+ TGGDP +L+ +RL+++ L ++HV++LR H+ Sbjct: 119 VGSLGEAELDAALAYIAARPEIWEVVVTGGDPFLLAPRRLERIAAALGGMEHVRVLRLHT 178 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 RVP+VDP R++ L+ LK G+ V++A+HANHP EF+ + AA++RL +AGI L+SQSV Sbjct: 179 RVPVVDPARVDAALVAALKAFGRAVFVALHANHPREFTPASRAALARLVDAGIPLVSQSV 238 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LL+G+NDD E L LMR FVE R+KPYYLHH DLA GT HFR + EGQ ++ L+ ++S Sbjct: 239 LLRGVNDDAETLGLLMRAFVENRVKPYYLHHGDLAPGTGHFRTGLAEGQALMRILRGRVS 298 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 GLCQP Y+LD+PGG+GKV + + G G + +TD H YPP+ Sbjct: 299 GLCQPTYVLDIPGGHGKVPVGPGYLAPRGAG-WTVTDPDGREHAYPPE 345 >gi|86750071|ref|YP_486567.1| hypothetical protein RPB_2954 [Rhodopseudomonas palustris HaA2] gi|86573099|gb|ABD07656.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris HaA2] Length = 363 Score = 449 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 185/349 (53%), Positives = 250/349 (71%), Gaps = 4/349 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L L E D++++++ Y+IA+TP +A LI+P++P+DPIARQ+IP+ +E Sbjct: 14 TLRQPSELIAQGLAPAESRDDLEQVAARYAIAVTPDVAALIDPNDPHDPIARQYIPRADE 73 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L LP ER+DPIGD H+P++GIVHR+ DR+LLKL+HVC VYCRFCFRRE +G K L Sbjct: 74 LVTLPIERDDPIGDGAHAPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRRETIGPGKDNAL 133 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + T AAL YI+ +IWEVIFTGGDPL+LS +R+ +++ L I HV+I+RFH+RVP+ Sbjct: 134 SREATAAALDYIRAHPEIWEVIFTGGDPLMLSPRRMAEIMAELATIAHVKIIRFHTRVPV 193 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP RI PEL++ L+ GK ++A+HANHP E + A AA + L +AGI ++SQSVLL+G Sbjct: 194 ADPARITPELVRALQTPGKTTWVALHANHPRELTAAARAACAMLIDAGIPMVSQSVLLRG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD E L LMR FVE RIKPYYLHH DLA GT+H R TI EGQ ++ +L+ ++SGLCQ Sbjct: 254 VNDDSETLEALMRGFVECRIKPYYLHHGDLAPGTAHLRTTIAEGQALMRALRGRVSGLCQ 313 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGGYGK I + + + Y + D+ VH YPP S Sbjct: 314 PEYVLDIPGGYGKAPIGPNYLTGEDGTVADSRYRVRDYCGDVHLYPPGS 362 >gi|209965785|ref|YP_002298700.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW] gi|209959251|gb|ACI99887.1| L-lysine 2,3-aminomutase [Rhodospirillum centenum SW] Length = 353 Score = 449 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 175/343 (51%), Positives = 236/343 (68%), Gaps = 2/343 (0%) Query: 6 KTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 +TL S L +A L+ + ++ ++ ++ +++A+TP +A L++P +P DP+ARQF+P Sbjct: 10 RTLRSPGALADAGLLPDDGRLPALEAVARRFAVAVTPAVAELVDPTDPADPVARQFLPDP 69 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 EL PEE DPIGD SP+KGIVHRY DR+LLK +H CPVYCRFCFRREMVG T Sbjct: 70 AELETRPEELADPIGDAPFSPVKGIVHRYRDRVLLKPVHTCPVYCRFCFRREMVGPGAET 129 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 L D +AAL YI + +IWEVI TGGDPLILS +RL +++ L I HV I+R HSRV Sbjct: 130 -LDGADLDAALDYIAARPEIWEVILTGGDPLILSPRRLAEIVARLDAIPHVGIVRLHSRV 188 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+VDP+R+ EL+ L+ ++ +HANH E +EEA AAI+RL +AGI +LSQSVLL Sbjct: 189 PVVDPERVTAELVAALRGRRLTTWVMLHANHWKELTEEARAAIARLVDAGIPMLSQSVLL 248 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 KG+NDD E LA R V R+KP+YLH DLA GT+HFR T+ EGQ ++ +L+ +SGL Sbjct: 249 KGVNDDVETLARTFRALVAARVKPHYLHQGDLAKGTAHFRTTVAEGQALMRALRGDVSGL 308 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 CQP Y+LD+PGG+GKV + + + G G + +TD H Y Sbjct: 309 CQPTYVLDIPGGHGKVPLTPTHAEPDGAGGWTVTDPRGGRHPY 351 >gi|154247831|ref|YP_001418789.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter autotrophicus Py2] gi|154161916|gb|ABS69132.1| lysine 2,3-aminomutase YodO family protein [Xanthobacter autotrophicus Py2] Length = 362 Score = 449 bits (1157), Expect = e-124, Method: Composition-based stats. Identities = 172/344 (50%), Positives = 233/344 (67%), Gaps = 1/344 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL S DL A L D + ++ Y++A+TP + + I+ +P DPIARQF+P E Sbjct: 19 TLRSGDDLVAAGLADARDRDALARVAERYAVAVTPTLVDAIDRTDPADPIARQFVPHPAE 78 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L + PEE DPIGD HSP+ GIVHRY DR LLK++ VC VYCRFCFRREMVG L Sbjct: 79 LEVRPEELADPIGDEAHSPVPGIVHRYRDRALLKIVGVCAVYCRFCFRREMVGPGAAATL 138 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + E A AY+ +IWEVI TGGDP +LS +R+ +V+ L I HV+I+RFH+RVPI Sbjct: 139 SPEALERAFAYLSAHPEIWEVILTGGDPFMLSPRRMGEVMARLAAIAHVKIVRFHTRVPI 198 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 P+R++ LI LK G Y+A+H NH E + +A +A++R+A+AGI LLSQSVLL+G Sbjct: 199 AAPERVSDALIAALKAPGLTSYVAVHVNHARELTPDARSALARMADAGIPLLSQSVLLRG 258 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LA L R+ VE R+KPYYLHHPDLA GT+HFRL I GQ+++ +L+ ++SG+ Sbjct: 259 VNDEADTLAALFRSLVECRVKPYYLHHPDLAPGTAHFRLDIARGQELMRALRGRLSGIAL 318 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 P Y+LD+PGG GKV + +I G ++D+ VH YPP+ Sbjct: 319 PTYVLDIPGGAGKVPLTPGHIAPAGT-RLAVSDNCGGVHLYPPE 361 >gi|192291173|ref|YP_001991778.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas palustris TIE-1] gi|192284922|gb|ACF01303.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas palustris TIE-1] Length = 363 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 180/349 (51%), Positives = 246/349 (70%), Gaps = 4/349 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP+ EE Sbjct: 14 TLRQPDELIAEGLAAADDRAMLSEVAARYAIAVTPAVAALIDRADPDDPIARQYIPRAEE 73 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+ Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP RI P+L++ L+ GK ++A+HANHP E +E A AA +R+ +AGI ++SQSVLL+G Sbjct: 194 ADPARITPDLVRALRAPGKTTWLALHANHPRELTEAARAACARIIDAGIPMVSQSVLLRG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ Sbjct: 254 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGGYGK + + + + Y + D+ VH YPP+S Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLSDADGTGADSRYRVADYCGEVHLYPPQS 362 >gi|89896773|ref|YP_520260.1| hypothetical protein DSY4027 [Desulfitobacterium hafniense Y51] gi|219667394|ref|YP_002457829.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium hafniense DCB-2] gi|89336221|dbj|BAE85816.1| hypothetical protein [Desulfitobacterium hafniense Y51] gi|219537654|gb|ACL19393.1| lysine 2,3-aminomutase YodO family protein [Desulfitobacterium hafniense DCB-2] Length = 413 Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats. Identities = 133/348 (38%), Positives = 198/348 (56%), Gaps = 4/348 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + A++L + +Q EI E+ Y A++P +LI+ +P DPI Q Sbjct: 68 WQLKNR-IQDAENLSTLLPLTPKQRHEINEVGKAYRWAVSPYYLSLIDKDDPQDPIRLQS 126 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EE+ E DP+G+ SP I RYPDR+++ + ++C +YCR C RR +G Sbjct: 127 LPSVEEILDDSGE-ADPMGEEYTSPAPCITRRYPDRLIINVTNLCAMYCRHCQRRRNIG- 184 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + EAAL YI+ +I +V+ TGGD L+LS + L +L L IKHV+I R Sbjct: 185 EIDLHETRANLEAALDYIRSNPEIRDVLVTGGDALLLSDQMLDWLLGELHEIKHVEIKRI 244 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ P RI EL L++ P+YI NHP E +EE A RL AG+IL +Q Sbjct: 245 GTRVPVTLPMRITDELCAILEKYP-PLYINTQFNHPQEVTEETKKAADRLIKAGVILGNQ 303 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGIND PEI+ L + +++R++PYY+ H GTSHF I++G +I+ +L+ Sbjct: 304 AVLLKGINDQPEIMKRLNQELLKIRVRPYYIFHAKNVKGTSHFIPRIQDGLRIMENLRGY 363 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SGL P YI++ PGG GK I + + + I V YP Sbjct: 364 TSGLAIPTYIINAPGGGGKTPILPQYLISLNDEEAVIRTWEGKVVHYP 411 >gi|262197122|ref|YP_003268331.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum DSM 14365] gi|262080469|gb|ACY16438.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum DSM 14365] Length = 419 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 125/350 (35%), Positives = 196/350 (56%), Gaps = 4/350 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q R+ LT+A++ + E+ + + + + TP A+L++P + PI +Q Sbjct: 38 WQARN-MLTTAEEFARVVELSDEERAALVDTAPMFRTGATPYYASLMDPARADCPIRKQA 96 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP + EL+ PEE DP+G+++ SP +VH+YPDR+LL +L C +YCR C RR +VG Sbjct: 97 IPSRRELDFAPEELRDPLGEDSQSPAPCVVHKYPDRVLLLVLDRCAIYCRHCNRRRLVGG 156 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + D +A + YI QI +V+ +GGDPL+LS+ RL +L LR I+HV+I+R Sbjct: 157 --DAPPARDDIDAGIDYIARTPQIRDVLLSGGDPLLLSNARLAHILGRLRAIEHVEIIRI 214 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R+P+V P RI+ EL L+ P+YI H NHP E + EA AA RL ++GI + +Q Sbjct: 215 GTRLPVVLPMRIDDELCATLRRF-HPLYINTHFNHPKEITSEARAACERLVDSGIPVGNQ 273 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+N + LMR + +R++PYYL D GT H R ++ ++ L+ Sbjct: 274 AVLLRGVNSSVRCIRALMRALLRMRVRPYYLFQGDTVLGTDHMRTPVDAAIALMEGLRGW 333 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG+ P ++D PGG GK+ + + + + V YP Sbjct: 334 TSGMAIPHMVIDAPGGGGKLPFGPEYVLERHPDHVLVRTYRGRVVRYPEP 383 >gi|282897351|ref|ZP_06305353.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii D9] gi|281198003|gb|EFA72897.1| Lysine 2,3-aminomutase YodO family protein [Raphidiopsis brookii D9] Length = 375 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 127/347 (36%), Positives = 201/347 (57%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+RH+ LT + + E+ + +++A+TP A+L++P + N P+ Q Sbjct: 28 WQMRHR-LTKLEQFQKLLCLTPEEEQGFIMAVDKFAVAVTPYFASLLDPEDANCPLRLQV 86 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+KEEL + + DP G++N SP+ GIVHRYPDR+LL L C YCR+C R +V S Sbjct: 87 IPRKEELIVSSGDMIDPCGEDNQSPVPGIVHRYPDRVLLLALDSCAAYCRYCTRSRLV-S 145 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q +A + Y+++ +++ +V+ +GGDPL++S++ L +L LR I H++ +R Sbjct: 146 QGEMTPIKHRLDAMINYLEDHTEVRDVLISGGDPLLMSNQVLDSLLGRLRGISHIEFVRI 205 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SRVP PQRI PEL++ L++ V++++H H E + E A LA+ GI L Q Sbjct: 206 GSRVPCFLPQRITPELVKVLRKHR--VWLSVHFCHLRELTLEVAQACDLLADGGIPLGCQ 263 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+ND + L NL ++LR++PYYL+ D GTSH R +I+ G +++ L+ Sbjct: 264 TVLLKGVNDSEQALKNLFHGLLKLRVRPYYLYQCDPVVGTSHLRTSIQSGLDLISKLRSH 323 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +G P Y++D PGG GKV I + NG + + + Y Sbjct: 324 TTGYAIPTYVIDAPGGGGKVPIQPETLIGYENGKAIVKNWQDRSFTY 370 >gi|27379499|ref|NP_771028.1| hypothetical protein blr4388 [Bradyrhizobium japonicum USDA 110] gi|27352651|dbj|BAC49653.1| blr4388 [Bradyrhizobium japonicum USDA 110] Length = 364 Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats. Identities = 171/357 (47%), Positives = 240/357 (67%), Gaps = 11/357 (3%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL +L +L + ++ ++ Y++A+TP + LI+ +P+DPIARQF+P Sbjct: 8 RTLREPAELVAEHLAPAAALPALERVAARYAVAITPALVELIDTSDPDDPIARQFVPTAA 67 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + P E DPIGD+ HSP+ GIVHRYPDR+L KL+HVC VYCRFCFRREMVG K Sbjct: 68 ELEMQPGESADPIGDHPHSPVPGIVHRYPDRVLFKLVHVCAVYCRFCFRREMVGPGKDNA 127 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS AA+ YI+ +IWEVI TGGDPL+LS +R+ +++ L I HV+I+R H+RVP Sbjct: 128 LSDSAYRAAVDYIRAHDEIWEVILTGGDPLMLSPRRMSEIMADLAGIDHVKIIRLHTRVP 187 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP R++ E++ LK AG ++A+HANH E +E A AA +RL +AGI ++SQSVLL+ Sbjct: 188 VADPARVSDEMVAALKVAGATTWVALHANHARELTEGARAACARLVDAGIPMVSQSVLLR 247 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ L++LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ+++ L+ ++SGLC Sbjct: 248 GVNDNVTALSDLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQELMRQLRGRVSGLC 307 Query: 306 QPFYILDLPGGYGKVKIDTHNI-----------KKVGNGSYCITDHHNIVHDYPPKS 351 QP Y++D+PGG GK + + + + Y I D+ VH YPP++ Sbjct: 308 QPDYVIDIPGGAGKSPVGPNYVLAAQNTAPDAREAATETRYRIVDYCGDVHLYPPET 364 >gi|182680126|ref|YP_001834272.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica subsp. indica ATCC 9039] gi|182636009|gb|ACB96783.1| lysine 2,3-aminomutase YodO family protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 356 Score = 448 bits (1153), Expect = e-124, Method: Composition-based stats. Identities = 188/344 (54%), Positives = 243/344 (70%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L S DL A LI EQ + E+ ++I LT ++A+LIN ++P DPIARQF+P E Sbjct: 12 ALRSTTDLVAAGLIPPEQERALAELEKTHAIGLTTIMADLINRNDPLDPIARQFLPDPRE 71 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + PEE +DPIGD SP++GIVHRYPDR+LLKLLH+CPVYCRFCFRRE VG L Sbjct: 72 ADRRPEELDDPIGDAAFSPVEGIVHRYPDRVLLKLLHICPVYCRFCFRRETVGPGSPMHL 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + +AA AYI IWEVI TGGDPLILS +RL ++L+ L I HV+ILR H+RVP Sbjct: 132 SPEALDAAFAYIASTPSIWEVILTGGDPLILSPRRLAELLERLDAIDHVKILRLHTRVPC 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 VDP+RI P+L+ L+ + K VY+A+HANHP E + +A A + +AGI +LSQSVLL+G Sbjct: 192 VDPERITPDLVALLRGSRKTVYLALHANHPRELTPQARQACAAFIDAGIPMLSQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD +LA+LMR FVE RIKPYYLHHPDLA GT HFRL+I EGQ ++ L+ +SGLCQ Sbjct: 252 VNDDASVLADLMRAFVETRIKPYYLHHPDLAPGTGHFRLSIAEGQALMRRLRGHLSGLCQ 311 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 P Y+LDLPGG+GK + + + + + D+ ++H YPPK Sbjct: 312 PTYMLDLPGGFGKSPVGPNYLGAENDQGLRVEDYRGMMHAYPPK 355 >gi|218531178|ref|YP_002421994.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium chloromethanicum CM4] gi|218523481|gb|ACK84066.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium chloromethanicum CM4] Length = 353 Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats. Identities = 174/345 (50%), Positives = 236/345 (68%), Gaps = 1/345 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L SA L A L+ + ++ ++ Y++++T +A LI+ ++P+DPIARQFIP+ EE Sbjct: 4 ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + PEER DPIGD+ H + GIVHRY DR+LLK LH+CPVYCRFCFRRE VG L Sbjct: 64 IETRPEERADPIGDDAHEAVPGIVHRYADRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + AA YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+ Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V+P R++ L+ LK V++A+HANHP EF+ A AAI++L +AGI ++SQSVLL+G Sbjct: 184 VEPARVDAALVDALKGFSGAVFVALHANHPREFTPAARAAIAQLVDAGIPMVSQSVLLRG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD E L LMR FVE RIKPYYLHH DLA GT H R + +GQ ++ +L+ ++SGL Q Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPQGQALMRTLRGRLSGLAQ 303 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGG+GKV + + G S+ +TD VH YPP+S Sbjct: 304 PLYVLDIPGGHGKVPVGPSYLDAAGE-SWRVTDPSGAVHAYPPES 347 >gi|298571349|gb|ADI87692.1| L-lysine 2,3-aminomutase [uncultured Nitrospirae bacterium MY2-3C] Length = 419 Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats. Identities = 117/347 (33%), Positives = 186/347 (53%), Gaps = 3/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + +L S Q L ++ ++ +E++ Y +TP +LI+ NPNDPI RQ Sbjct: 35 WQLSN-SLRSVQALGELLNLQPHEVARYQELTRRYHYRITPYYLSLIDFTNPNDPIRRQG 93 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL+ DP+ + S + G+VHRYPDR L + C +YCR C R+ M Sbjct: 94 IPDLSELDFQRVGYSDPLEEEEDSQVPGLVHRYPDRALAIVTSKCAMYCRHCTRKRMWH- 152 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + S + A + YI+ + I EVI +GGDPL ++ + L L LR I +++LR Sbjct: 153 EGESFRSRDELTAMIDYIRGEVGIREVIVSGGDPLTMNLQLLDWFLGELRAIPRLEVLRI 212 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R+P+V P I EL+Q L P+++ NHP E + +I A R+ AGI + +Q Sbjct: 213 GTRLPVVLPMAITDELVQMLARHR-PLWLNTQFNHPNELTPASIEACDRILRAGIPVSNQ 271 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND E++ +L + ++PYYL D +G HFR +I +G +I+ ++ Sbjct: 272 SVLLRGVNDSVEVMKDLCHALQRVMVRPYYLFQCDPVSGAEHFRTSIWKGIEIIEMMRGH 331 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 GLC P +++D PGG GKV + + + ++ + Y Sbjct: 332 TGGLCIPTFVVDAPGGGGKVPLQPFYLLSTSEDEVLLRNYEGSIIRY 378 >gi|163852420|ref|YP_001640463.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium extorquens PA1] gi|163664025|gb|ABY31392.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium extorquens PA1] Length = 353 Score = 446 bits (1149), Expect = e-123, Method: Composition-based stats. Identities = 175/345 (50%), Positives = 234/345 (67%), Gaps = 1/345 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L SA L A L+ + ++ ++ Y++++T +A LI+ +P+DPIARQFIP+ EE Sbjct: 4 ALKSATALARAGLVDAAALPTLERVAARYAVSVTADMAELIDASDPDDPIARQFIPRAEE 63 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + PEER DPIGD+ H + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG L Sbjct: 64 IETRPEERADPIGDDAHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + A YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+ Sbjct: 124 SEAELAVAYRYIAAHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V+P R++ L+ LK V++A+HANHP EF+ A AI+RL +AGI ++SQSVLL+G Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARGAIARLVDAGIPMVSQSVLLRG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGG+GKV + + G S+ +TD VH YPP+S Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAAGE-SWRVTDPSGAVHAYPPES 347 >gi|300863800|ref|ZP_07108726.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506] gi|300338201|emb|CBN53872.1| L-lysine 2,3-aminomutase [Oscillatoria sp. PCC 6506] Length = 384 Score = 446 bits (1148), Expect = e-123, Method: Composition-based stats. Identities = 121/347 (34%), Positives = 201/347 (57%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+RH+ L+ + + + + +++A+TP A+L++P +P P+ Q Sbjct: 38 WQMRHR-LSKLEHFQGLLKLTAAEQRGLSIAPEKFAVAVTPHFASLLDPEDPLCPLRLQV 96 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P++EEL I + DP ++ SP+ G+VHRYPDR+LL L C YCR+C R +V S Sbjct: 97 VPKEEELTIDRADMVDPCSEDEDSPVPGLVHRYPDRVLLLALDTCAAYCRYCTRSRLV-S 155 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q ++ +A +AY++E +++ +V+ +GGDPL++S + L +L+ LR I H++ +R Sbjct: 156 QGEMYPVTRRIDAIIAYLEEHTEVRDVLISGGDPLLMSDEPLDNLLRRLRAIPHIEFVRI 215 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SRVP PQRI PEL+ L++ V++++H H E + E A LA+ GI L SQ Sbjct: 216 GSRVPSFLPQRITPELVAVLRKHR--VWLSLHFCHLRELTPEVAQACDLLADGGIPLGSQ 273 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+ND + L +L ++LR++PYYL+ D GT+H R +++ G +++ L+ Sbjct: 274 TVLLKGVNDSEQALKDLFHGLLKLRVRPYYLYQCDPVIGTAHLRTSVQTGIDLISKLRGH 333 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +G P Y++D PGG GKV I + NG + + + Y Sbjct: 334 TTGYAVPTYVIDAPGGGGKVPIQADTLIAYENGKTTVRNWEGKTYTY 380 >gi|240139757|ref|YP_002964234.1| putative aminomutase, putative kamA and yjeK-like protein [Methylobacterium extorquens AM1] gi|240009731|gb|ACS40957.1| putative aminomutase, putative kamA and yjeK-like protein [Methylobacterium extorquens AM1] Length = 353 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 176/345 (51%), Positives = 236/345 (68%), Gaps = 1/345 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L SA L A L+ + ++ ++ Y++++T +A LI+ ++P+DPIARQFIP+ EE Sbjct: 4 ALKSATALARAGLVDAAALPALERVAARYAVSVTADMAELIDANDPDDPIARQFIPRAEE 63 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + PEER DPIGD+ H + GIVHRYPDR+LLK LH+CPVYCRFCFRRE VG L Sbjct: 64 IETRPEERADPIGDDTHEAVPGIVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + AA YI +IWEV+ TGGDP LS +RL + L I HV++LRFH+RVP+ Sbjct: 124 SEVELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITDALGAIPHVRVLRFHTRVPV 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V+P R++ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q Sbjct: 244 VNDDAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGG+GKV + + + S+ +TD VH YPP+S Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAA-DESWRVTDPSGAVHAYPPES 347 >gi|296133315|ref|YP_003640562.1| lysine 2,3-aminomutase YodO family protein [Thermincola sp. JR] gi|296031893|gb|ADG82661.1| lysine 2,3-aminomutase YodO family protein [Thermincola potens JR] Length = 448 Score = 445 bits (1146), Expect = e-123, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 189/350 (54%), Gaps = 4/350 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 ++++ + + L + ++I++IK++ + A++P A+L++ +P+ P+ Q Sbjct: 90 WHMKNR-IRDVEVLAQIIDLTDKEIEDIKKVGQKFRWAISPYYASLMSERDPSCPVRLQA 148 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL ++DP+G+ SP I RYPDR+++ + + C +YCR C RR +G Sbjct: 149 IPSILELLDQSG-KDDPMGEEFTSPAPCITRRYPDRLIINVTNQCAMYCRHCQRRRNIGE 207 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + +AA+ YI+ +I +V+ TGGD L+LS+ L +L L I HV+I R Sbjct: 208 VDRNKP-RSEIKAAIEYIRANPEIRDVLITGGDALLLSNSELDWILTQLDSIPHVEIKRI 266 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQRI P+L + L++ P+YI NHP E + A +L AG +L +Q Sbjct: 267 GTRTLVSMPQRITPQLCEILEKHP-PLYINTQFNHPKEITPAVAEACDKLIKAGAVLGNQ 325 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL GIN++ ++ L +++RI+PYY+ H GTSHF +EEG KI+ L+ Sbjct: 326 AVLLNGINNNVHVMKKLNHELLKVRIRPYYIFHAKTVTGTSHFITKVEEGIKIMEKLRGY 385 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SGL P YI++ P GYGK + + G I V YP K Sbjct: 386 TSGLAVPTYIINAPKGYGKTPMLPEYLISSGEDEIVIRTWEKKVISYPNK 435 >gi|332703220|ref|ZP_08423308.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus str. Walvis Bay] gi|332553369|gb|EGJ50413.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio africanus str. Walvis Bay] Length = 430 Score = 444 bits (1144), Expect = e-123, Method: Composition-based stats. Identities = 123/341 (36%), Positives = 195/341 (57%), Gaps = 3/341 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+ + +TS QDL + + + + +A+TP +L + P++ + R Sbjct: 73 WQLKSR-ITSYQDLGSMLALSEAEQAA-ANCGAPLPLAITPYYLSLFHDQGPDNGVRRSI 130 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E + P E EDP+G+++HSP+ G+VHRYPDR+L C YCR+C R VG Sbjct: 131 VPTGFERLVNPGEAEDPLGEDHHSPVPGLVHRYPDRVLFLTTDYCAAYCRYCTRSRRVGK 190 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + K +AA+ YI + +V+ +GGDPL +S L +L +R I HV+++R Sbjct: 191 KACSSGNRKHWDAAIDYIARTPSVRDVLLSGGDPLTMSDAALDYLLGRIRAIPHVEVMRI 250 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 ++ P+V PQRI P+L + L+ P+ I++H HP E S E+ A RLA+AGI L SQ Sbjct: 251 GTKAPMVLPQRITPQLTRVLRRY-HPLMISVHCTHPGELSPESAEAFKRLADAGIPLGSQ 309 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGINDD L +LM ++ R++PYYL+H D GT HFR ++ +G +++ L+ Sbjct: 310 TVLLKGINDDVPTLKSLMHGLLKNRVRPYYLYHCDPVQGTGHFRTSVAKGVEMIEGLRGH 369 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 SG P +++D PGG GK+ ++ I + + Sbjct: 370 TSGYAIPTFVVDAPGGGGKIPVNPDYIVGQDGDDLVLRNFE 410 >gi|295691014|ref|YP_003594707.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC 21756] gi|295432917|gb|ADG12089.1| lysine 2,3-aminomutase YodO family protein [Caulobacter segnis ATCC 21756] Length = 346 Score = 444 bits (1143), Expect = e-122, Method: Composition-based stats. Identities = 178/346 (51%), Positives = 238/346 (68%), Gaps = 5/346 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 KTL + L A LI E++ ++ ++ Y++A+TP +A LI+ +PNDPIARQF+P E Sbjct: 5 KTLRDVRSLAEAGLIPSERLAALEAVAARYAVAVTPAMAELIDTADPNDPIARQFVPAPE 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P E DPIGD+ HSP+ GI+HRYPDR+LLK H C VYCRFCFRREMVG + + Sbjct: 65 ELVASPGEDGDPIGDSIHSPVDGIIHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ +AA AYI + QIWEVI TGGDP +LS +RL ++ L I+HV+++RFH+RVP Sbjct: 125 LTPAQLDAAFAYIAARPQIWEVIVTGGDPFVLSSRRLAALIDRLEAIEHVKVVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 VDP + +L+ LK + K VY+A+HANH E + A AA + L +AGI ++SQ+VLLK Sbjct: 185 AVDPALVTDDLVAALKRSTKAVYVALHANHARELTPAARAACAHLVDAGIAMVSQTVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDPE L+ LMR FVE RIKPYYLHH DLA GT+H R TIE+GQ I+ +L+ +SGL Sbjct: 245 GVNDDPETLSALMRAFVETRIKPYYLHHGDLAPGTAHLRTTIEDGQAIMRALRGTLSGLA 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP Y+LD+PGG+GK + + G + D + H YPP + Sbjct: 305 QPTYVLDIPGGHGKAPVGPSYLSAGG-----VEDPNGRRHAYPPAA 345 >gi|291286722|ref|YP_003503538.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio acetiphilus DSM 12809] gi|290883882|gb|ADD67582.1| lysine 2,3-aminomutase YodO family protein [Denitrovibrio acetiphilus DSM 12809] Length = 393 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 198/350 (56%), Gaps = 4/350 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + L S +D+ + + + + S A+TP A+L+ + D + R Sbjct: 46 WQLAN-ILRSREDVEKIVKLSESEACAFETCSG-LPFAVTPYYASLLTGTSSCDAVRRTV 103 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP E+ E +DP+G+++ SP+ G+VHRYPDR+L + C YCR+C R +G Sbjct: 104 IPTHMEMIKGRGEADDPLGEDSCSPVDGLVHRYPDRVLFLVTEHCSTYCRYCTRSRKMGE 163 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + A+ YI+ Q+ +V+ +GGDPL+L ++ +L++L I+HV+++R Sbjct: 164 IHSGNI-KERWQKAIDYIKATPQVRDVLISGGDPLVLPDASIKWLLESLSAIEHVEMIRI 222 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 ++ P+V PQRI LI+ LK + +P++++IH HP E + E + A + LA+AGI L SQ Sbjct: 223 GTKAPVVLPQRITKSLIKILK-SVRPLFMSIHFTHPDELTAETVQACNMLADAGIPLGSQ 281 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+ND + L L +++R++PYYL+ D +G+ HFR +E G ++ L+ Sbjct: 282 TVLLKGVNDSVDTLKGLYHGLLKVRVRPYYLYQCDPISGSGHFRTKVETGLNMIKGLRGH 341 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 +G P Y++D PGG GK+ + + G + ++ + YP + Sbjct: 342 TTGYAIPNYVIDAPGGGGKIPLIPDYFQGKSEGQIMLKNYQGNTYLYPDE 391 >gi|188582434|ref|YP_001925879.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi BJ001] gi|179345932|gb|ACB81344.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium populi BJ001] Length = 353 Score = 444 bits (1142), Expect = e-122, Method: Composition-based stats. Identities = 173/343 (50%), Positives = 240/343 (69%), Gaps = 1/343 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L S L A L+ E + ++ ++ Y++++T +A LI+ +P+DPIARQF+P+ EE Sbjct: 4 ALKSTTALARAGLLPAEALPALERVAARYAVSVTADMAELIDRDDPHDPIARQFVPRAEE 63 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + EER DPIGD+ H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG L Sbjct: 64 IETRVEERADPIGDDAHAPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPAGHGSL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + AA YI + +IWEV+ TGGDP LS +RL ++ TL I HV++LRFH+RVP+ Sbjct: 124 SEAELAAAFRYIADHPEIWEVVVTGGDPFALSPRRLGEIATTLGAIPHVRVLRFHTRVPV 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V+P R++ +++ LK+ V++A+HANHP EF+ A AAI+RL +AG+ ++SQSVLL+G Sbjct: 184 VEPARVDADVVAALKKFPGAVFVALHANHPREFTPAARAAIARLVDAGLPMVSQSVLLRG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ L+ ++SGL Q Sbjct: 244 VNDDAATLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRHLRGRLSGLAQ 303 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349 P Y+LD+PGG+GKV + +++ +G++ +TD VH YPP Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLEE-SDGAWQVTDPSGAVHPYPP 345 >gi|126699870|ref|YP_001088767.1| L-lysine 2,3-aminomutase [Clostridium difficile 630] gi|254975845|ref|ZP_05272317.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-66c26] gi|255093232|ref|ZP_05322710.1| L-lysine 2,3-aminomutase [Clostridium difficile CIP 107932] gi|255307270|ref|ZP_05351441.1| L-lysine 2,3-aminomutase [Clostridium difficile ATCC 43255] gi|255314974|ref|ZP_05356557.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-76w55] gi|255517649|ref|ZP_05385325.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-97b34] gi|255650759|ref|ZP_05397661.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-37x79] gi|260683845|ref|YP_003215130.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196] gi|260687505|ref|YP_003218639.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291] gi|306520670|ref|ZP_07407017.1| lysine 2,3-aminomutase YodO family protein [Clostridium difficile QCD-32g58] gi|115251307|emb|CAJ69138.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Clostridium difficile] gi|260210008|emb|CBA64044.1| L-lysine 2,3-aminomutase [Clostridium difficile CD196] gi|260213522|emb|CBE05249.1| L-lysine 2,3-aminomutase [Clostridium difficile R20291] Length = 422 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 116/344 (33%), Positives = 186/344 (54%), Gaps = 4/344 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL ++ +T L + K++ + IKE+ + A++P +LI+P + DPI Sbjct: 62 WQLSNR-ITDVDTLSKIITLTKKEKEYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLS 120 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL E+ DP+G+ +P I RYPDR+++ + + C +YCR C RR +G Sbjct: 121 IPTHIELEDEQEDL-DPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q+ + S + ++ YI+E +I +V+ TGGD L L L+ +L L+ I HV +R Sbjct: 179 QQDSHKSKAIIQESIDYIRENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRL 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQRI E LK+ PVYI H NHP E ++E+ A +LANAG+ L +Q Sbjct: 239 GTRTLVTMPQRITDEFCNMLKKY-HPVYINTHFNHPMEITKESKEACEKLANAGVPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL GIN+D ++ L + +++R+KPYY+ GT HF ++++G +I+ L+ Sbjct: 298 AVLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGY 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 SG+ P YI++ P G GK + + G + V Sbjct: 358 TSGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKV 401 >gi|167644729|ref|YP_001682392.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31] gi|167347159|gb|ABZ69894.1| lysine 2,3-aminomutase YodO family protein [Caulobacter sp. K31] Length = 347 Score = 443 bits (1139), Expect = e-122, Method: Composition-based stats. Identities = 179/346 (51%), Positives = 243/346 (70%), Gaps = 4/346 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + L SAQ L A L+ E++ I+ ++ Y++A+TP +A LI+P N +DPIARQFIP + Sbjct: 5 RPLRSAQALAEAGLVAAERLPAIEAVAARYAVAITPDMAALIDPANESDPIARQFIPSEA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL+ P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + Sbjct: 65 ELSENPGEIPDPIGDEAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLAN 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ + +AA AYI S+IWEVI TGGDPL+LS +RL+ + + L I+HV+++RFH+R+P Sbjct: 125 LTPEKLDAAFAYIAAHSEIWEVIITGGDPLVLSPRRLRDIGERLAGIEHVKVVRFHTRIP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +VDP I E++ LK +GK VY+A+HANH E +E A AA +R+ +AG+ +LSQ+VLLK Sbjct: 185 VVDPGAITGEMVDALKASGKTVYVALHANHARELTEAARAACARIIDAGVPMLSQTVLLK 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GINDDPE L LMR FVE RI+PYYLHH D A GT H R ++E+G+ ++ +++ + SGLC Sbjct: 245 GINDDPETLGTLMRAFVESRIRPYYLHHGDHAPGTGHLRTSVEDGRALMRAIRGRFSGLC 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP Y+LD+P G+GKV I + G + D + H YPP Sbjct: 305 QPTYVLDIPDGHGKVPIGPDYLAVEGE----VEDPNGGAHAYPPVG 346 >gi|255101396|ref|ZP_05330373.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-63q42] Length = 422 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 186/344 (54%), Gaps = 4/344 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL ++ +T L + K++ + IKE+ + A++P +LI+P + DPI Sbjct: 62 WQLSNR-ITDVDTLSKIITLTKKEKEYIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLS 120 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL E+ DP+G+ +P I RYPDR+++ + + C +YCR C RR +G Sbjct: 121 IPTHIELEDEQEDL-DPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q+ + S + ++ YI+E +I +V+ TGGD L L L+ +L L+ I HV +R Sbjct: 179 QQDSHKSKAIIQESIDYIRENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRL 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQRI E LK+ P+YI H NHP E ++E+ A +LANAG+ L +Q Sbjct: 239 GTRTLVTMPQRITDEFCNMLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL GIN+D ++ L + +++R+KPYY+ GT HF ++++G +I+ L+ Sbjct: 298 AVLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGY 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 SG+ P YI++ P G GK + + G + V Sbjct: 358 TSGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKV 401 >gi|255656236|ref|ZP_05401645.1| L-lysine 2,3-aminomutase [Clostridium difficile QCD-23m63] gi|296450329|ref|ZP_06892088.1| lysine 2,3-aminomutase [Clostridium difficile NAP08] gi|296878741|ref|ZP_06902744.1| lysine 2,3-aminomutase [Clostridium difficile NAP07] gi|296260822|gb|EFH07658.1| lysine 2,3-aminomutase [Clostridium difficile NAP08] gi|296430248|gb|EFH16092.1| lysine 2,3-aminomutase [Clostridium difficile NAP07] Length = 422 Score = 442 bits (1138), Expect = e-122, Method: Composition-based stats. Identities = 115/344 (33%), Positives = 186/344 (54%), Gaps = 4/344 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL ++ +T L + K++ + IKE+ + A++P +LI+P + DPI Sbjct: 62 WQLSNR-ITDVDTLSKIITLTKKEKEHIKEVGTQFRWAISPYYLSLIDPEDICDPIKLLS 120 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL E+ DP+G+ +P I RYPDR+++ + + C +YCR C RR +G Sbjct: 121 IPTYIELEDEQEDL-DPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q+ + S + ++ YI+E +I +V+ TGGD L L L+ +L L+ I HV +R Sbjct: 179 QQDSHKSKAIIQESIDYIRENEEIRDVLVTGGDALTLKDDYLEWILSQLKEIPHVDYVRL 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQRI E LK+ P+YI H NHP E ++E+ A +LANAG+ L +Q Sbjct: 239 GTRTLVTMPQRITDEFCNMLKKY-HPIYINTHFNHPMEITKESKEACEKLANAGVPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL GIN+D ++ L + +++R+KPYY+ GT HF ++++G +I+ L+ Sbjct: 298 AVLLNGINNDKFVMRCLNQELLKIRVKPYYIFQSKHVKGTKHFNTSVDDGLEIMEYLRGY 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 SG+ P YI++ P G GK + + G + V Sbjct: 358 TSGMAIPTYIVNAPKGGGKTPLLPQYLVSKGTDYVMLRTWEGKV 401 >gi|302872649|ref|YP_003841285.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor obsidiansis OB47] gi|302575508|gb|ADL43299.1| lysine 2,3-aminomutase YodO family protein [Caldicellulosiruptor obsidiansis OB47] Length = 406 Score = 441 bits (1136), Expect = e-122, Method: Composition-based stats. Identities = 129/346 (37%), Positives = 211/346 (60%), Gaps = 5/346 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL++ +TSA+ L + +++ +I+E++ Y A++P +LI+P +P+ PI +Q Sbjct: 63 WQLKN-MITSAKILKELLNLDEKEAQQIEEVAKVYRFAISPYYLSLIDPDDPSCPIKKQS 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E DP+ + + SP K + RYPDR+++K+ ++C ++CRFC RR ++G Sbjct: 122 VPSSLELIEKGE--LDPMDEEHTSPTKIVTQRYPDRLIIKVTNICGMFCRFCQRRRLIG- 178 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S D A+ Y+ + I +V+ TGGD L+LS + L+ +L++LR I HV+I+R Sbjct: 179 ETDTHASLDDITDAIEYVAKNPHIRDVLITGGDALLLSDEILEWILRSLRQIPHVEIIRI 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQRI EL+ LK+ P+YI H NHP E ++E+ A L++AG+ L +Q Sbjct: 239 GTRAPVTLPQRITKELVDMLKKY-HPIYINTHFNHPREITKESKKACEMLSDAGVPLGNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL G+N+D I+ L + +++R+KPYY+ HP GTSHF + IEEG +I+ SL+ + Sbjct: 298 MVLLNGVNNDKYIVRKLNQELLKIRVKPYYIFHPKRVKGTSHFWVAIEEGIEIIESLRGR 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 SG+ P YI++ P G GK I + + VG + + V + Sbjct: 358 TSGMAVPTYIVNAPKGKGKTPILPNYLLYVGKDKVVLRNWEGEVFE 403 >gi|251773208|gb|EES53760.1| Lysine 2,3-aminomutase [Leptospirillum ferrodiazotrophum] Length = 411 Score = 441 bits (1135), Expect = e-122, Method: Composition-based stats. Identities = 134/359 (37%), Positives = 212/359 (59%), Gaps = 18/359 (5%) Query: 1 MQ------LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND 54 Q +RH + + AN + E+++ + Y I + +LI +P D Sbjct: 4 WQKLLVEGIRHGADLPPEWVIEANGVGPEKVEGL------YPIRINDYYRSLI--SDPQD 55 Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 PI Q IP E + EDP+G++ SP+ IVHRYPDR+L + + CP+YCR+C R Sbjct: 56 PIGLQVIPDPAEWMD-ADSPEDPLGEDADSPVPAIVHRYPDRVLFLVTNQCPIYCRYCTR 114 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + +VG +G V+S ++ + YI+E ++ +VI +GGDPL+L + L+++L LR I+H Sbjct: 115 KRLVGKPEG-VVSREEIRQGIDYIREHPEVRDVILSGGDPLMLKDEVLEEILTGLRSIEH 173 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 ++I+R +RVP PQR+ PEL + L P+Y+ +H NHP E + E+ A LA+AG Sbjct: 174 LEIIRIGTRVPSALPQRVTPELCRMLSRF-HPLYMNLHFNHPREITPESSEACRLLADAG 232 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 I L Q+VL+KGINDD E+L L + +++R+KPYYL+ DL G +HFR +E+G I+ Sbjct: 233 IPLGCQTVLMKGINDDAEVLGTLFKGLLKIRVKPYYLYQADLTRGANHFRTPVEKGISIM 292 Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYPPKSS 352 +L+ ISG+ P +++D PGG GK+ + + NG + ++ N ++ YP SS Sbjct: 293 KALQGNISGMAIPHFVIDAPGGGGKIPVLADDYLLGRENGQVLLKNYENKIYSYPDVSS 351 >gi|116332642|ref|YP_802359.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116127509|gb|ABJ77601.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 370 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 129/347 (37%), Positives = 193/347 (55%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + + L + +++ + S + ++TP NL + +PN PI Q Sbjct: 24 WQIQNR-IKTQTQLSEHIELTEKETLSFEACSEFFEFSVTPYYLNLADTKDPNCPIRLQI 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P + EL ER+DP+ + H P+KG+ HRYPDR L L HVC VYCRFC R+ V Sbjct: 83 VPHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSK 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T ++ + AL Y + +I EVI +GGDPL LS ++L +L L+ I H+ +R Sbjct: 143 SVHT-PGKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239 HSR P+ P RI+ L K+ P+Y+ H NHP E + IS L G +I+L+ Sbjct: 202 HSRYPVTLPMRIDSSLCSVFKKHF-PIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLN 260 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLKGIND E L L + IKPYYLH D G+ FR+ IE G +I+ ++ Sbjct: 261 QSVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRG 320 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 +ISGL P Y++DL GG GKV + T + + SY ++ + +++ Sbjct: 321 RISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYIFRNYQDELYE 367 >gi|300022957|ref|YP_003755568.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium denitrificans ATCC 51888] gi|299524778|gb|ADJ23247.1| lysine 2,3-aminomutase YodO family protein [Hyphomicrobium denitrificans ATCC 51888] Length = 356 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 176/347 (50%), Positives = 238/347 (68%), Gaps = 1/347 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 M + LTS DL A L D + + Y+I++TP +A+LI+P++P DPIARQF Sbjct: 1 MTRTPRKLTSVDDLIAAELAPASARDALNNVGARYAISVTPAVADLIDPNDPADPIARQF 60 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL ER DPIGD SP G+VHRYPDR+LLK+ VCPVYCRFCFRREMVG Sbjct: 61 VPDARELETHAAERADPIGDRIKSPAPGVVHRYPDRVLLKIASVCPVYCRFCFRREMVGP 120 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 G LS+ D AA+AYI+ +WEVI TGGDPL+LS +R+++V + L I HV+ILR+ Sbjct: 121 ANGETLSADDLAAAVAYIRATPAVWEVILTGGDPLVLSPRRIREVTEMLSAIPHVKILRW 180 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 H+RVP+VDP R+ ELI LK K V++ +H NH E + A A+++L +AGI L+SQ Sbjct: 181 HTRVPVVDPDRVTDELIAALKATHKTVFVGLHTNHARELTGSARTAVAKLVDAGIPLVSQ 240 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+NDD + L +LMRT VELR+KPYYLHH DLA GT+HFR TI +GQ ++ L+++ Sbjct: 241 TVLLKGVNDDADTLEDLMRTLVELRVKPYYLHHGDLAPGTAHFRTTIAKGQAVMRELRKR 300 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +SGL P Y+LDLPG +GKV ++++ + G + D ++ H Y Sbjct: 301 LSGLALPTYVLDLPGAHGKVPLESYASLESS-GRTRLRDAYDQEHIY 346 >gi|254562169|ref|YP_003069264.1| aminomutase [Methylobacterium extorquens DM4] gi|254269447|emb|CAX25413.1| putative aminomutase, putative homologue kamA and yjeK [Methylobacterium extorquens DM4] Length = 353 Score = 441 bits (1134), Expect = e-121, Method: Composition-based stats. Identities = 174/345 (50%), Positives = 235/345 (68%), Gaps = 1/345 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L SA L A L+ + + ++ ++ Y++++T +A LI+ +P DPIARQFIP+ EE Sbjct: 4 ALKSATALARAGLVDAQALPALERVAARYAVSVTADMAELIDASDPADPIARQFIPRAEE 63 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + PEER DPIGD+ H + G+VHRYPDR+LLK LH+CPVYCRFCFRRE VG L Sbjct: 64 IETRPEERADPIGDDAHEAVSGVVHRYPDRVLLKPLHICPVYCRFCFRRERVGPAGQGSL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + AA YI +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+ Sbjct: 124 SEAELAAAYRYIATHPEIWEVVVTGGDPFALSPRRLAAITEALGAIPHVRVLRFHTRVPV 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V+P R++ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G Sbjct: 184 VEPARVDAALVAALKGFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND E L LMR FVE RIKPYYLHH DLA GT H R + EGQ ++ +L+ ++SGL Q Sbjct: 244 VNDVAETLEALMRRFVENRIKPYYLHHGDLAPGTGHLRTELPEGQALMRTLRGRLSGLAQ 303 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGG+GKV + + + S+ +TD VH YPP+S Sbjct: 304 PLYVLDIPGGHGKVPVGPGYLDAA-DESWRVTDPSGAVHAYPPES 347 >gi|24217359|ref|NP_714842.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str. 56601] gi|24202437|gb|AAN51857.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar Lai str. 56601] Length = 365 Score = 440 bits (1133), Expect = e-121, Method: Composition-based stats. Identities = 131/347 (37%), Positives = 194/347 (55%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + + L + +++I + S + ++TP L +P +PN PI Q Sbjct: 19 WQIQNR-IKTRTHLSEFLELSEKEILSFEACSQFFEFSVTPYYLGLADPKDPNCPIRLQI 77 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EEL E++DP+ + P+KG+ HRYPDR L L HVC VYCRFC R+ V S Sbjct: 78 VPHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKV-S 136 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + +D + AL Y +I EVI +GGDPL LS +L +LK L+ I H+ +R Sbjct: 137 KSSHTPGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRI 196 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239 HSR P+ P RI+ L LK P+YI H NHP E + IS L G ++L+ Sbjct: 197 HSRYPVTLPMRIDSSLCAVLKRHF-PIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLN 255 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q VLLKGIND E L L + IKPYYLH D G+ FR+ IE+G +I+ ++ Sbjct: 256 QGVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRG 315 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 +ISGL P Y++DL GG GKV + T + + + SY ++ + +++ Sbjct: 316 RISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYRDELYE 362 >gi|116329760|ref|YP_799479.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116122653|gb|ABJ80546.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis L550] Length = 370 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 129/347 (37%), Positives = 194/347 (55%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + + L + +++ + S + ++TP NL + +PN PI Q Sbjct: 24 WQIQNR-IKTQTQLSEHIELTEKETLSFEACSEFFEFSVTPYYLNLADTKDPNCPIRLQI 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P + EL ER+DP+ + H P+KG+ HRYPDR L L HVC VYCRFC R+ V Sbjct: 83 VPHQGELTRNSFERQDPLAEEAHMPVKGVTHRYPDRALWYLSHVCAVYCRFCTRKRKVSK 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T ++ + AL Y + +I EVI +GGDPL LS ++L +L L+ I H+ +R Sbjct: 143 SVHT-PGKEEWDQALIYFRSHKEIKEVILSGGDPLNLSDEKLDYLLGELKSISHINQVRI 201 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239 HSR P+ P RI+ L K+ P+Y+ H NHP E + IS L G +I+L+ Sbjct: 202 HSRYPVTLPMRIDSSLCSVFKKHF-PIYLVTHFNHPKEITPLVRERISLLIQEGNVIVLN 260 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLKGIND E L L + IKPYYLH D G+ FR+ IE G +I+ ++ Sbjct: 261 QSVLLKGINDSAETLKKLFYGLTAIGIKPYYLHQCDEVWGSGDFRVEIERGVEIMKQIRG 320 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 +ISGL P Y++DL GG GKV + T + + SY + ++ + +++ Sbjct: 321 RISGLSVPLYVVDLTGGGGKVPLPTFYLAGKTDRSYILRNYQDELYE 367 >gi|83589322|ref|YP_429331.1| L-lysine 2,3-aminomutase [Moorella thermoacetica ATCC 39073] gi|83572236|gb|ABC18788.1| glutamate 2,3-aminomutase [Moorella thermoacetica ATCC 39073] Length = 415 Score = 440 bits (1132), Expect = e-121, Method: Composition-based stats. Identities = 120/347 (34%), Positives = 188/347 (54%), Gaps = 5/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H+ +TS L + + + + I ++ Y A++P +L+ P P+ PI RQ Sbjct: 64 WQLTHR-ITSVATLAELIPLTEAEKEAILKVERTYRWAVSPYYLSLMGPE-PDCPIRRQA 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL DP+ + SP I RYPDR+++ + + C +YCR C RR +G Sbjct: 122 LPSAAELEDN-HGVLDPMDEELTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRRNIG- 179 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + S ++ E AL YI++ +I +V+ TGGD L+LS + +L L I HV+I R Sbjct: 180 EVDRSRSRRELEQALQYIRQNEEIRDVLITGGDALMLSDAMIDWLLTELDNIPHVEIKRL 239 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ PQRI PEL + L + P+Y+ NHP E + A A RL AG++L +Q Sbjct: 240 GTRVPVTMPQRITPELCRVLAKHP-PIYLNTQFNHPREVTAAAKEACDRLVQAGVVLGNQ 298 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+N+ P ++ L + +++R++PYY+ H GT+HF +IEEG +I+ L+ Sbjct: 299 AVLLKGVNNHPFVMRKLNQELLKIRVRPYYIFHAKPVKGTTHFITSIEEGVEIMDKLRGY 358 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P YI++ P G GK I + + + + Y Sbjct: 359 TSGLAVPTYIINAPHGLGKTPILPQYVIARNDHQVILRTWEKRIIFY 405 >gi|170749147|ref|YP_001755407.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium radiotolerans JCM 2831] gi|170655669|gb|ACB24724.1| lysine 2,3-aminomutase YodO family protein [Methylobacterium radiotolerans JCM 2831] Length = 347 Score = 439 bits (1130), Expect = e-121, Method: Composition-based stats. Identities = 177/347 (51%), Positives = 241/347 (69%), Gaps = 1/347 (0%) Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 ++ L SA DL +A LI + D + + Y++++TP +A LI+P +P+DPI RQF+P+ Sbjct: 2 NRALRSADDLLSAGLISGAEADALGAVLARYAVSVTPDMAELIDPQDPDDPIGRQFVPRV 61 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E PEER DPIGD H+P+ GIVHRYPDR+LLK LHVCPVYCRFCFRREMVG Sbjct: 62 AEAVATPEERADPIGDAAHAPVTGIVHRYPDRVLLKPLHVCPVYCRFCFRREMVGPDGLG 121 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 L+ + +AALAYI + +IWEV+ TGGDP LS +RL + + L I HV+++R H+RV Sbjct: 122 TLTDAELDAALAYIAQDPRIWEVVLTGGDPFALSPRRLGVIAERLAAIAHVRVMRVHTRV 181 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V P ++ L++ LK G+ V++A+HANHP EF+ A AA +RL +AGI L+ QSVLL Sbjct: 182 PVVKPDLVSDALVRALKRFGRAVFVAVHANHPREFTAAASAACARLVDAGIPLVGQSVLL 241 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +G+ND+ L LMRT VE RIKPYYLHH DLA GT+H R + EGQ ++ +L+ ++SGL Sbjct: 242 RGVNDEAATLEALMRTLVENRIKPYYLHHGDLAPGTAHLRTDVAEGQALMRALRGRLSGL 301 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP Y+LD+PGG+GKV I ++ +G +TD H YPPK+ Sbjct: 302 AQPTYVLDIPGGHGKVPIGPGYLRDTPDG-VRVTDPGGQDHAYPPKA 347 >gi|188586383|ref|YP_001917928.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351070|gb|ACB85340.1| L-lysine 2,3-aminomutase [Natranaerobius thermophilus JW/NM-WN-LF] Length = 412 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 110/351 (31%), Positives = 189/351 (53%), Gaps = 4/351 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ ++ + L + + + EI+++ Y A++P A+L++P +P P+ +Q Sbjct: 63 WQLQNR-ISDVETLEKILNLTESERQEIEQVGKDYRWAVSPYYASLMDPDDPECPVRKQS 121 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E+ DP+ + +P + RYPDR+++ + + C +YCR C R+ +G Sbjct: 122 IPSAQEVKDKAG-VTDPMAEEFTNPAGNVTRRYPDRLIINVTNQCAMYCRHCQRKRNIG- 179 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + E ++ Y++ ++I +V+ TGGD +LS + L +L LR I HV+I+R Sbjct: 180 EVDKPTPKDVLEESIEYVKNHAEIRDVLLTGGDAFMLSDETLDWLLTELRKIPHVEIIRL 239 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR P+ PQRI L L + P+Y+ NHP E + EA A +LA AG+ L +Q Sbjct: 240 GSRTPVTMPQRITQNLCDILTKH-LPLYVNTQYNHPKELTAEAKKATFKLARAGVGLGNQ 298 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL IN+DP ++ L ++ ++PYY+ H GT+HF +E+G +I+ ++ Sbjct: 299 AVLLNTINNDPHVMKTLCHELLKGMVRPYYIFHAKKVKGTTHFNTRVEDGLEILEKMRGY 358 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 SG+ P YI++ P G+GK I + G I N V +YP + Sbjct: 359 TSGMAIPSYIINAPDGHGKTPIVPEYMISQGRDKVYIRTWENRVFEYPNDA 409 >gi|45655809|ref|YP_003618.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45602780|gb|AAS72255.1| L-lysine 2, 3-aminomutase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 365 Score = 439 bits (1129), Expect = e-121, Method: Composition-based stats. Identities = 131/347 (37%), Positives = 194/347 (55%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + + L + +++I + S + ++TP L P +PN PI Q Sbjct: 19 WQIQNR-IKTRTHLSEFLELSEKEILSFEACSQFFEFSVTPYYLGLAAPKDPNCPIRLQI 77 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EEL E++DP+ + P+KG+ HRYPDR+L L HVC VYCRFC R+ V S Sbjct: 78 VPHQEELIRNGFEKQDPLSEETFMPVKGVTHRYPDRVLWYLSHVCAVYCRFCTRKRKV-S 136 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + +D + AL Y +I EVI +GGDPL LS +L +LK L+ I H+ +R Sbjct: 137 KSSHTPGQEDWDQALDYFWSHKEIKEVILSGGDPLNLSDDKLDYLLKELKSIPHINQVRI 196 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLS 239 HSR P+ P RI+ L LK P+YI H NHP E + IS L G ++L+ Sbjct: 197 HSRYPVTLPMRIDSSLCAVLKRHF-PIYIVTHFNHPKEITPLVRERISLLIQEGNTMVLN 255 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q VLLKGIND E L L + IKPYYLH D G+ FR+ IE+G +I+ ++ Sbjct: 256 QGVLLKGINDSAETLKELFYGLTAIGIKPYYLHQCDEVWGSGSFRVEIEKGVEIMKQIRG 315 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 +ISGL P Y++DL GG GKV + T + + + SY ++ + +++ Sbjct: 316 RISGLSVPLYVVDLTGGGGKVPLPTSYLAEKTDHSYIFRNYQDELYE 362 >gi|78045085|ref|YP_361273.1| putative L-lysine 2,3-aminomutase [Carboxydothermus hydrogenoformans Z-2901] gi|77997200|gb|ABB16099.1| putative L-lysine 2,3-aminomutase [Carboxydothermus hydrogenoformans Z-2901] Length = 411 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 121/348 (34%), Positives = 202/348 (58%), Gaps = 4/348 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ +T+ + L + + + E++E+S Y A++P +LI+P +P+ I +Q Sbjct: 66 WQLKNR-ITTPEVLRKILPLSDQVLWELEEVSKVYRFAISPYYLSLIDPDDPDCGIKKQS 124 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP E+ E DP+ + SP+ + RYPDR+++ + ++C +YCR C RR +G Sbjct: 125 IPSILEVLDDTGEL-DPMNEAGTSPVAAVTRRYPDRLIINVTNMCGMYCRHCQRRRNIG- 182 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + AL YI+E +I +V+ TGGD L+LS L +LK L I HV+I R Sbjct: 183 EVDRKTPREQIKEALLYIREHKEIRDVLITGGDALLLSDLELDWILKELSEIPHVEIKRI 242 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ PQR+ L++ LK+ P+YI NHP E + EA A+ +L AG++L +Q Sbjct: 243 GTRVPVTLPQRVTDNLVKILKKYP-PIYINTQFNHPREVTPEAKKAVDKLIEAGVVLGNQ 301 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+ND+P I+ L +++R++PYY+ GT HF IE+G +I+ SL+ Sbjct: 302 AVLLKGVNDNPVIMEKLNHELLKIRVRPYYIFQAKRVRGTMHFVPKIEDGLRIMESLRGY 361 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SGL P+YI++ PGG+GK+ + + ++ + + + YP Sbjct: 362 TSGLAVPYYIVNAPGGFGKIPLLPQYLIELSEEEAVLRNWEGRIIRYP 409 >gi|297569348|ref|YP_003690692.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio alkaliphilus AHT2] gi|296925263|gb|ADH86073.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio alkaliphilus AHT2] Length = 360 Score = 438 bits (1128), Expect = e-121, Method: Composition-based stats. Identities = 135/352 (38%), Positives = 202/352 (57%), Gaps = 10/352 (2%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q L ++T Q L + + +K ++ Y + + P +LIN P DPI RQ Sbjct: 16 WQRLLAASITCPQALADRFGLDPA---PLKAVTARYPLRINPYYLSLINQ--PGDPIWRQ 70 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P EL DP+G+ ++SP+ G+VH+Y DR LL + C +YCRFC R+ VG Sbjct: 71 AVPDVRELEDTVC-PADPLGEEDYSPVPGLVHKYRDRALLLVTGQCAMYCRFCTRKRKVG 129 Query: 120 SQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 +++ S+ +AALAY+++ I +V+ +GGDPL+L RL +L LR I+H++I+ Sbjct: 130 TREMAAAGSAAQLDAALAYLEQTPAIHDVLISGGDPLLLPDGRLIPLLTRLRRIRHLEII 189 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R SRVP PQR+ +L LK+ P++I H NHP E + EA A RLA+AGI L Sbjct: 190 RLGSRVPCTLPQRVTLKLAAALKKF-HPLFINTHFNHPREITPEAARACQRLADAGIPLG 248 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKG+NDD + LMR +++R+KPYYL DL+ GT HFR +E+G I+ L Sbjct: 249 NQTVLLKGVNDDAATIRELMRGLLKIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELI 308 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SGL P + LD P G GK+ + ++ +G+ T++ + YP Sbjct: 309 GHTSGLATPTFALDAPEGRGKIPLTPDYLQSLGD-KLIFTNYQGLPCQYPNP 359 >gi|108761049|ref|YP_632864.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622] gi|108464929|gb|ABF90114.1| L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622] Length = 410 Score = 438 bits (1127), Expect = e-121, Method: Composition-based stats. Identities = 115/350 (32%), Positives = 183/350 (52%), Gaps = 3/350 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH + + L + + ++E S + I ++P +LI+P +P P+ Q Sbjct: 39 WQQRH-AVRGLEQLERYVPLTSNERAGVQETSALFRIGISPYYLSLIDPEHPFCPVRMQS 97 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP + E I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR + Sbjct: 98 IPVRAEARIRPGELADPLGEDKTRPEECIVHKYPDRVLFLALDTCSVYCRHCTRRRITQG 157 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 LS + + Y++ ++ +V+ +GGDP +LS RL+++L L I HV+++R Sbjct: 158 GVAE-LSKEQLRRGVDYVRSHPEVRDVLISGGDPFMLSDSRLEELLAPLSEIPHVEMIRI 216 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ P R+ L + L+ PV++ H NHP E + EA A RL + G+ + +Q Sbjct: 217 GTRVPVCLPMRVTDALAKTLRRYA-PVFVVTHFNHPKEVTPEAREACERLVDHGVPVENQ 275 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VL++ +N D I+ L + R++PYYLH D+A G H R I +G +I+ L+ Sbjct: 276 AVLMRQLNSDARIIKELSHLLLRSRVRPYYLHQMDVAEGCEHLRTPIAKGLEIIQQLRGY 335 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 +GL P +DLPGG GKV + + G ++ YP Sbjct: 336 TTGLAVPHLAVDLPGGGGKVTLQPDYAVEYGAQETVFRNYKGERFTYPEP 385 >gi|206603974|gb|EDZ40454.1| Lysine 2,3-aminomutase [Leptospirillum sp. Group II '5-way CG'] Length = 383 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 122/322 (37%), Positives = 194/322 (60%), Gaps = 6/322 (1%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 E+ + + + +LI +P PI RQ IP EE+ + DP+G+++ SP+ I Sbjct: 33 EVEKTFPVRINAYYRSLI--TDPEGPIGRQVIPDPEEVLDF-DSPVDPLGEDSDSPVPAI 89 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 VHRYPDR+L + + CP+YCR+C R+ M+G+ +G V++ + E + YI+ ++ +VI Sbjct: 90 VHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEG-VVTRSEVEEGIEYIRTHPEVRDVIL 148 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL+L L+ +L LR I H++I+R SRVP PQR+ PEL LK+ P+++ Sbjct: 149 SGGDPLMLKDDYLEFILSGLRKIPHLEIIRIGSRVPSSLPQRVTPELCAMLKKY-HPLFM 207 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 +H NHP E + E+ A + LA+AGI L Q+VL+KG+ND+ IL L + + +R+KPY Sbjct: 208 NLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKLLTIRVKPY 267 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID-THNIK 328 YL+ DL G +HFR + G +I+ L+ SG+ P +++D PGG GKV I + Sbjct: 268 YLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVPILPPDYLV 327 Query: 329 KVGNGSYCITDHHNIVHDYPPK 350 + +G + ++ V+ YP Sbjct: 328 SMEDGDVVLRNYEGNVYTYPDA 349 >gi|15605944|ref|NP_213321.1| hypothetical protein aq_454 [Aquifex aeolicus VF5] gi|4033489|sp|O66761|Y454_AQUAE RecName: Full=Uncharacterized KamA family protein aq_454 gi|2983117|gb|AAC06722.1| hypothetical protein aq_454 [Aquifex aeolicus VF5] Length = 370 Score = 437 bits (1124), Expect = e-120, Method: Composition-based stats. Identities = 124/345 (35%), Positives = 202/345 (58%), Gaps = 8/345 (2%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + + +++ + E+ + IK Y A+TP +LINP +P DPI Q Sbjct: 18 WQIQNR-IKTLKEIKKYLKLLPEEEEGIKRTQGLYPFAITPYYLSLINPEDPKDPIRLQA 76 Query: 61 IPQKEELN--ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 IP+ E++ + D + + + G+ HRYPDR+LL + C VYCR C R+ + Sbjct: 77 IPRVVEVDEKVQSAGEPDALKEEGD--IPGLTHRYPDRVLLNVTTFCAVYCRHCMRKRIF 134 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 SQ + ++ + + YI+ +I +V+ +GG+PL LS ++L+ +L LR IKHV+I+ Sbjct: 135 -SQGERARTKEEIDTMIDYIKRHEEIRDVLISGGEPLSLSLEKLEYLLSRLREIKHVEII 193 Query: 179 RFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 RF +R+P++ PQR N +L+ L++ P++I H NHP E +E A A+ RL GI + Sbjct: 194 RFGTRLPVLAPQRFFNDKLLDILEKYS-PIWINTHFNHPNEITEYAEEAVDRLLRRGIPV 252 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLLKG+NDDPE++ L R + +++KP YL H D G HFR TI++G +I+ L Sbjct: 253 NNQTVLLKGVNDDPEVMLKLFRKLLRIKVKPQYLFHCDPIKGAVHFRTTIDKGLEIMRYL 312 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342 + ++SG P Y +DLPGG GKV + + +KK + Sbjct: 313 RGRLSGFGIPTYAVDLPGGKGKVPLLPNYVKKRKGNKFWFESFTG 357 >gi|75675833|ref|YP_318254.1| hypothetical protein Nwi_1641 [Nitrobacter winogradskyi Nb-255] gi|74420703|gb|ABA04902.1| L-lysine 2,3-aminomutase [Nitrobacter winogradskyi Nb-255] Length = 366 Score = 436 bits (1122), Expect = e-120, Method: Composition-based stats. Identities = 179/354 (50%), Positives = 240/354 (67%), Gaps = 10/354 (2%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +DL L + ++++++ Y+IA+TP +ANLI+P +P+DPIARQ++P +E Sbjct: 12 TLRRPEDLIAHGLAPAAALADLEKVAARYAIAITPEVANLIDPADPDDPIARQYLPSADE 71 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L ER DPIGD+ SP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L Sbjct: 72 LAAQAYERADPIGDHARSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETAL 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S T AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R H+RVP+ Sbjct: 132 SKSATAAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVPV 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP R+ E+ L+ G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+G Sbjct: 192 ADPARVTDEMAAALRTDGATTWLALHANHPRELTAAARAACARIIDAGIPMVSQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMR FV+ RIKPYYLHH DLA GT+H R T+E+GQ ++ L+ ++SGLCQ Sbjct: 252 VNDDAATLEALMRAFVQCRIKPYYLHHGDLAPGTAHLRTTLEQGQALMRELRGRVSGLCQ 311 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----------NGSYCITDHHNIVHDYPPK 350 P Y+LD+PGGYGK + + Y ITD+ VH YPPK Sbjct: 312 PDYVLDIPGGYGKSPVGPGYMSPSDLISGAGEHRPELHYLITDYCGGVHLYPPK 365 >gi|310822787|ref|YP_003955145.1| l-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1] gi|309395859|gb|ADO73318.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1] Length = 411 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 118/350 (33%), Positives = 187/350 (53%), Gaps = 3/350 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH + S L + ++ ++E + + + ++P +LI+P +P P+ Q Sbjct: 47 WQQRH-AVRSLAQLERYVPLTPQERAGVQETAALFRVGISPYYLSLIDPEHPFCPVRMQS 105 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +EE I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR + Sbjct: 106 IPVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRRITKG 165 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 LS +AYI+ ++ +V+ +GGDP ILS RL+++L L I HV+++R Sbjct: 166 -GEAELSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRI 224 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ P R+ L L+ PVY+ H NHP E + EA A RL + G+ + +Q Sbjct: 225 GTRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQ 283 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VL++ +N D I+ L + +R++PYYLH D+A G H R I +G +I+ ++ Sbjct: 284 AVLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGH 343 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 +GL P +DLPGG GKV + + + G ++ + YP Sbjct: 344 TTGLAVPHLAVDLPGGGGKVTLQPDYVVERGEHETVFRNYKGERYVYPEP 393 >gi|16124969|ref|NP_419533.1| L-lysine 2,3-aminomutase [Caulobacter crescentus CB15] gi|13421941|gb|AAK22701.1| L-lysine 2,3-aminomutase, putative [Caulobacter crescentus CB15] Length = 345 Score = 436 bits (1121), Expect = e-120, Method: Composition-based stats. Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 5/346 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL A+ L A L+ E++ ++ ++ Y++A+TP +A LI+P +DPIARQF+P E Sbjct: 5 QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + + Sbjct: 65 ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 124 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ +AA AYI ++ QIWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+RVP Sbjct: 125 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 184 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 VDP + PEL+ LK + K VY+A+HANH E + A AA +++ +AG+ ++SQ+VLL+ Sbjct: 185 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 244 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+PE L LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+ +SGL Sbjct: 245 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 304 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP Y+LD+PGG+GKV + + + + D V YPP + Sbjct: 305 QPTYVLDIPGGHGKVPVGPNYLSDGA-----VEDPDGAVRPYPPTA 345 >gi|85717361|ref|ZP_01048313.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A] gi|85695836|gb|EAQ33742.1| hypothetical protein NB311A_18903 [Nitrobacter sp. Nb-311A] Length = 365 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 181/355 (50%), Positives = 243/355 (68%), Gaps = 10/355 (2%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 T+ +DL L + ++++++ Y+IA+TP +A LI+P +P+DPIARQ++P E Sbjct: 11 TVRHPEDLIAHGLAPAAALADLEKVAARYAIAITPEVAGLIDPTDPDDPIARQYLPSANE 70 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L P ER DPIGD+ HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L Sbjct: 71 LAAQPGERADPIGDHAHSPVDGIVHRYPDRVLLKLIHVCAVYCRFCFRREMVGPAKETAL 130 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S T AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R H+RVP+ Sbjct: 131 SKSATTAALDYIRAHPEVWEVILTGGDPLMLSPRRLAEIMAELAAIDHVRIVRIHTRVPV 190 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 D R+ E++ L+ G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+G Sbjct: 191 ADSARVTDEMVAGLRTEGAATWLALHANHPRELTAAARAACARIVDAGIPMVSQSVLLRG 250 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMR FVE RIKPYYLHH DLA GT+H R T+EEGQ ++ +L+ ++SGLCQ Sbjct: 251 VNDDAATLETLMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEEGQLLMRALRGRVSGLCQ 310 Query: 307 PFYILDLPGGYGKVKIDTHNI----------KKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGGYGKV + + + Y ITD+ VH YPP S Sbjct: 311 PDYVLDIPGGYGKVPVGPDYMSLSDLTYRGGEHRPELRYHITDYCGGVHLYPPVS 365 >gi|221233690|ref|YP_002516126.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000] gi|220962862|gb|ACL94218.1| lysine 2,3-aminomutase [Caulobacter crescentus NA1000] Length = 358 Score = 435 bits (1120), Expect = e-120, Method: Composition-based stats. Identities = 175/346 (50%), Positives = 239/346 (69%), Gaps = 5/346 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL A+ L A L+ E++ ++ ++ Y++A+TP +A LI+P +DPIARQF+P E Sbjct: 18 QTLRDARSLTEAGLVPSERLPALEAVAARYAVAITPAMAELIDPDRDDDPIARQFVPSPE 77 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P E DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + + Sbjct: 78 ELVSSPGEDGDPIGDAAHSPVEGIVHRYPDRVLLKPTHTCAVYCRFCFRREMVGPEGLSN 137 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ +AA AYI ++ QIWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+RVP Sbjct: 138 LTPAQLDAAFAYIAQRPQIWEVIVTGGDPLVLSPRRLADLMDRLEAIDHVKIVRFHTRVP 197 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 VDP + PEL+ LK + K VY+A+HANH E + A AA +++ +AG+ ++SQ+VLL+ Sbjct: 198 AVDPGAVTPELVAALKRSSKTVYVALHANHARELTPAARAACAQIVDAGVPMVSQTVLLR 257 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+PE L LMR FVE RI+PYYLHH DLA GT+H R T+ EGQ I+ +L+ +SGL Sbjct: 258 GVNDNPETLVELMRAFVETRIRPYYLHHGDLAPGTAHLRTTVAEGQAIMRALRGTLSGLA 317 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP Y+LD+PGG+GKV + + + + D V YPP + Sbjct: 318 QPTYVLDIPGGHGKVPVGPNYLSDGA-----VEDPDGAVRPYPPTA 358 >gi|124514855|gb|EAY56366.1| Lysine 2,3-aminomutase [Leptospirillum rubarum] Length = 383 Score = 435 bits (1119), Expect = e-120, Method: Composition-based stats. Identities = 122/323 (37%), Positives = 195/323 (60%), Gaps = 6/323 (1%) Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88 +E+ + I + +LI +P PI RQ IP EE+ + DP+G+++ SP+ Sbjct: 32 REVEKTFPIRINAYYRSLI--TDPEGPIGRQVIPDPEEVLDF-DSPVDPLGEDSDSPVPA 88 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 IVHRYPDR+L + + CP+YCR+C R+ M+G+ +G V++ + E + YI+ ++ +VI Sbjct: 89 IVHRYPDRVLFLVTNQCPIYCRYCTRKRMIGTPEG-VVTRGEVEEGIEYIRTHPEVRDVI 147 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 +GGDPL+L L+ +L LR I H++++R SRVP PQR+ PEL LK+ P++ Sbjct: 148 LSGGDPLMLKDDYLEFILSGLRKIPHLEVIRIGSRVPSSLPQRVTPELCAMLKKY-HPLF 206 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + +H NHP E + E+ A + LA+AGI L Q+VL+KG+ND+ IL L + + +R+KP Sbjct: 207 MNLHFNHPDEITPESSLACNMLADAGIPLGCQTVLMKGVNDEAGILKKLFQKLLTIRVKP 266 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID-THNI 327 YYL+ DL G +HFR + G +I+ L+ SG+ P +++D PGG GKV I + Sbjct: 267 YYLYQADLTRGANHFRTPVSTGIRIMKELQGHTSGMAIPHFVIDAPGGGGKVPILPPDYL 326 Query: 328 KKVGNGSYCITDHHNIVHDYPPK 350 + +G + ++ V+ YP Sbjct: 327 VSMEDGDVVLRNYEGNVYTYPDA 349 >gi|284097493|ref|ZP_06385581.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3] gi|283830995|gb|EFC35017.1| L-lysine 2,3-aminomutase [Candidatus Poribacteria sp. WGA-A3] Length = 340 Score = 434 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 134/345 (38%), Positives = 203/345 (58%), Gaps = 10/345 (2%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 +L T+ + + L A + ++E++ I + I + P +LI P DPI +Q + Sbjct: 6 RLVRDTVNTPEKLAAAFDVD---LEEMQRIHKEFPIRINPYYLSLIKE--PGDPIWKQVV 60 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EL + EDP+ + + S + + HRYPDR L + ++CP+YCRFC R+ VG Sbjct: 61 PDPREL--MSTGVEDPLHEEDDSEVPNVTHRYPDRALFYVNYMCPIYCRFCTRKRKVGDP 118 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 +S + E LAYIQ +I +VI +GGDPL+L+ K++ ++ LR IKH++I+R Sbjct: 119 H--SISEDNIETGLAYIQAHPEIRDVIISGGDPLMLTDKKIDMIVGGLRAIKHLEIIRIG 176 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SRVP+ PQRI PEL LK P YI H NHP E + E A LA+AGI L +Q+ Sbjct: 177 SRVPVTLPQRITPELCAILKRH-HPFYINTHFNHPREITPETEKACGMLADAGIPLGNQA 235 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+NDDP+++ LM+ + +R+KPYY++ DL GT HFR ++ G IVA+L+ I Sbjct: 236 VLLKGVNDDPDVMVELMKGLLRIRVKPYYIYQADLVVGTDHFRTAVQTGLDIVAALRGHI 295 Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 SGL P Y++D PGG GK+ + + + + + ++ V+ Sbjct: 296 SGLGVPHYVVDAPGGGGKIALIPNPVVAFDDDEIQLRNYEGGVYS 340 >gi|162455543|ref|YP_001617910.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56'] gi|161166125|emb|CAN97430.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56'] Length = 411 Score = 434 bits (1118), Expect = e-120, Method: Composition-based stats. Identities = 129/355 (36%), Positives = 195/355 (54%), Gaps = 6/355 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNPNDPIARQ 59 QLRH L+SA +L+ A + E++ + I +TP +L + +P PI RQ Sbjct: 58 WQLRH-ALSSADELHGALSLTPEELAGARRAEKAGLPIRVTPYYLSLCDNADPACPIRRQ 116 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P +E +P + DP+G+ H +V RYPDR LL C VYCRFC R MVG Sbjct: 117 CVPLADESAEVPGDLVDPLGEVAHEVAPHLVQRYPDRALLLATDRCAVYCRFCTRSRMVG 176 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 G ++ + A+AY++ ++ +VI +GGDPL +S R+ +++ LR I+ V+ +R Sbjct: 177 D-GGGAVALERLAPAMAYLEAHPEVRDVIVSGGDPLAVSTDRVVRLIARLRQIQSVETIR 235 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +RVP+ PQRI EL++ LK P+++ H NHP E + A A RLA+ G +++ Sbjct: 236 LATRVPVTLPQRITAELVRALKPY-HPLWVMTHFNHPKELTPAAERACKRLADHGFPVMN 294 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+GINDD LA L R V R++PYYL D GT+H R + G ++ L+ Sbjct: 295 QTVLLRGINDDATTLATLFRGLVRWRVRPYYLLQMDPVRGTAHLRTPLATGVSLMEQLQG 354 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY--PPKSS 352 +++G+ P I+D PGG GKV I + G + H + +Y PP S Sbjct: 355 RLTGIALPKLIVDTPGGMGKVPIGPEYVVDRRPGRTVLRTHRGVEVEYVDPPAGS 409 >gi|158424552|ref|YP_001525844.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571] gi|158331441|dbj|BAF88926.1| putative lysine 2,3-aminomutase [Azorhizobium caulinodans ORS 571] Length = 375 Score = 434 bits (1117), Expect = e-120, Method: Composition-based stats. Identities = 167/341 (48%), Positives = 228/341 (66%), Gaps = 1/341 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +A DL A L + + + Y++A+TP + ++ + +DPIARQF+P E Sbjct: 30 TLRTADDLIAAGLAPAAERAVLDAVGARYAVAVTPELVAAMDRTDASDPIARQFVPDVAE 89 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L P+E DPIGD+ HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG T L Sbjct: 90 LRTDPQELVDPIGDDAHSPVPGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETAL 149 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + E AL Y+ ++WEVI TGGDP ++S +R+ V+ L I HV+++RFH+RVPI Sbjct: 150 TPDMLERALGYVAAHPEVWEVILTGGDPFMVSPRRMADVVGRLAAIPHVKVVRFHTRVPI 209 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 P+R++ E+++ LK G Y+A+H NH E + A AA+ RLA+AGI LLSQ+VLLKG Sbjct: 210 AAPERVSEEMVRALKAPGVAAYVAVHVNHARELGDAATAALGRLADAGIPLLSQTVLLKG 269 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND E L L R VE R+KPYYLHHPDLA GT HFRL++ EGQ +V +L+ ++SG+ Q Sbjct: 270 VNDRVETLDALFRALVERRVKPYYLHHPDLAPGTGHFRLSVPEGQALVRALRGRLSGIAQ 329 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LD+PGG GKV + + G G + + D+ +H Y Sbjct: 330 PTYVLDIPGGAGKVPLTPGYLTPQGAG-WHVADNCGGIHAY 369 >gi|83814229|ref|YP_445259.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM 13855] gi|83755623|gb|ABC43736.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber DSM 13855] Length = 401 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 117/350 (33%), Positives = 192/350 (54%), Gaps = 5/350 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + SA+ L ++ IK + + +TP A+L+ P +P+ P+ RQ Sbjct: 21 WQMQNR-IHSAEALRKWIRPTDDERAAIKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQA 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E + DP+ + H P+K ++H Y DR+ + C +YCR+C R+ MVG Sbjct: 80 VPTMDEFGPDIVDELDPLDETGHEPVKNLIHNYEDRVAFCVTAECAIYCRYCLRKRMVGD 139 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + +AA+ YI +I +V+ TGGDPL + L+ +L LR I HV+++RF Sbjct: 140 -AEYFMRTDEHQAAIDYIAAHDEIRDVLLTGGDPLTFNEANLEWLLSRLRAIDHVELIRF 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P+ P RI +L L + P++I H NHP E + +A AAI RL +AGI + +Q Sbjct: 199 GSRMPVKLPYRITDDLCDLLAQY-HPLWINTHFNHPKECTGDAAAAIGRLKDAGIPVGNQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+NDDP+ + L V +R++PYYL+ + GT H R IE G I+ L+ + Sbjct: 258 TVLLRGVNDDPDTMKALNEGLVRMRVRPYYLYQAQIIGGTGHLRTPIEVGMHIMRQLRGR 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG P Y+LD P +GKV ++ +K + + + P Sbjct: 318 TSGFAIPDYVLDTP--HGKVPLNRSYVKGRAGDHVLMESYDGTLWAEPNP 365 >gi|320161902|ref|YP_004175127.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1] gi|319995756|dbj|BAJ64527.1| lysine 2,3-aminomutase [Anaerolinea thermophila UNI-1] Length = 446 Score = 434 bits (1117), Expect = e-119, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 198/347 (57%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL H+ L S +D + + + + + + +TP +LINP +P+DPI +Q Sbjct: 28 WQLSHR-LNSVEDFEQVLRLTESERKALT-TQGLFRVDITPYFVSLINPDDPDDPIRKQV 85 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP+ EE+ ED + ++ HSP+ G+VHRYPDR+L+ + C YCR+C R +VG Sbjct: 86 IPRAEEIVPFTGMMEDSLAEDRHSPVPGLVHRYPDRVLMLVTTQCASYCRYCTRSRIVGD 145 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T S + E + Y++ Q+ +V+ +GGDPL L+ K L+++L LR I+H++I+R Sbjct: 146 PSAT-FSRAEFEMQIEYLKRTPQVRDVLLSGGDPLTLAPKLLEELLSRLREIEHIEIIRI 204 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SRVP+ PQRI E + + PV++ IH NHP E ++E A RL AG+ L +Q Sbjct: 205 GSRVPVFLPQRITQEFCDMVSKY-HPVWMNIHVNHPNEITQELADACDRLTRAGVPLGNQ 263 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL G+ND + L++ V +R++PYYL+ DL G HFR + +G +I+ L+ Sbjct: 264 SVLLAGVNDCVHVQRKLVQDLVRIRVRPYYLYQCDLVEGAGHFRTPVAKGIEIIEGLRGH 323 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG P Y++D PGG GK+ + + + + + + ++ + Y Sbjct: 324 TSGYAVPTYVVDAPGGGGKIPVMPNYLISMSDHKIILRNYEGYITTY 370 >gi|114566648|ref|YP_753802.1| lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337583|gb|ABI68431.1| L-lysine 2,3-aminomutase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 422 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 121/353 (34%), Positives = 190/353 (53%), Gaps = 5/353 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQ 59 Q+R++ + L + + + ++ IK +S A++P +LI+ N PI +Q Sbjct: 74 WQMRNR-INDGNVLASILGLNEFEVQTIKRVSKKVRWAISPYYLSLIDFENYAASPIYKQ 132 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E+ E +DP+G+ SP I RYPDR+++ + + C +YCR C RR G Sbjct: 133 SVPSLHEIIECKGE-DDPMGEEMSSPAPRITRRYPDRLIINVTNQCAMYCRHCQRRRNFG 191 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + KD EAAL YI+ S+I +V+ TGGD L+LS + L +L L I HV+I R Sbjct: 192 -ETDNHAAHKDLEAALQYIKNNSEIRDVLITGGDALMLSDRTLDWLLGELDAISHVEIKR 250 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +R P+ PQRI L LK P+YI N P E + EA A RL AG++L + Sbjct: 251 IGTRTPVTLPQRITANLCAVLKRH-TPIYINTQFNSPLEVTPEAKQACDRLIEAGVVLGN 309 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLKGIND+ ++ L + +++R++PYYL GT+HF + G I+ L+ Sbjct: 310 QAVLLKGINDNVHVMKKLNQELLKIRVRPYYLFQAKEVKGTTHFISPVNTGLDIMKHLRG 369 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 SGL P Y+++ PGGYGK ++ + + I+ +YP +++ Sbjct: 370 YTSGLAIPTYVINAPGGYGKTPVNPEYVLDINENEVIISTWQGKTFNYPHRNN 422 >gi|163782523|ref|ZP_02177520.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1] gi|159882096|gb|EDP75603.1| hypothetical protein HG1285_16605 [Hydrogenivirga sp. 128-5-R1-1] Length = 378 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 122/350 (34%), Positives = 212/350 (60%), Gaps = 8/350 (2%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + S ++L + +E+++ I+ Y +A+TP +L++P + DPI Q Sbjct: 28 WQIRNR-IKSLEELQRYVRLTEEEVEGIRLTQGLYPLAITPYYLSLMDPDDTEDPIRLQA 86 Query: 61 IPQKEELNILP--EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 IP++ E++ D + + + G+ HRYPDR+L+ + C VYCR C R+ + Sbjct: 87 IPRRIEVDEEAQSAGEPDALREEGD--IPGLTHRYPDRVLMSVTTFCAVYCRHCMRKRIF 144 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 ++ + ++ + L+YI+E ++ +V+ +GG+PL LS+++++ +LK LR IKHV+I+ Sbjct: 145 -AEGERARTKEEIDRMLSYIREHEEVRDVLISGGEPLSLSNEKIEYILKGLREIKHVEIV 203 Query: 179 RFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 RF +R+P++ PQR + EL+ L++ P++I H NHP E +E A A+ RL GI + Sbjct: 204 RFGTRLPVLAPQRFFDEELLSILEKYS-PIWINTHFNHPKEVTELAEEAVDRLLRHGIPV 262 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLLKG+ND+PEI+ +L R + +++KP YL H D G HFR T+++G +I+ L Sbjct: 263 NNQTVLLKGVNDNPEIMLSLFRKLLRIKVKPQYLFHCDPIRGAVHFRTTVDKGLEIMRFL 322 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 + KISG+ P Y +DLPGG GKV + + + S+ + +Y Sbjct: 323 RGKISGMGIPTYAVDLPGGKGKVPLQPNYVVGREGNSFLFESFTGELVEY 372 >gi|256829555|ref|YP_003158283.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium baculatum DSM 4028] gi|256578731|gb|ACU89867.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium baculatum DSM 4028] Length = 411 Score = 434 bits (1116), Expect = e-119, Method: Composition-based stats. Identities = 123/351 (35%), Positives = 193/351 (54%), Gaps = 11/351 (3%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINP-HNPNDPIARQ 59 QL+H+ +TS Q + + ++ A TP + ++ + R Sbjct: 60 WQLKHR-VTSVQAMAGILGVDA---PVFEKSRRRLPAAATPYYL----WVASRSEALRRC 111 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E +LP E DP+G+ HSP+ GIVHRYPDR+L + C YCR+C R +VG Sbjct: 112 ILPDVRETQVLPFETSDPLGEEGHSPVPGIVHRYPDRVLFLVTEFCSTYCRYCTRSRLVG 171 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + G + + AL YI++ ++ +V+ +GGDPL L +++ +L LR I HV+I+R Sbjct: 172 -KAGHRSDMRSWQVALDYIRQHDEVRDVLLSGGDPLTLPAMKIEWLLSQLRAIPHVEIVR 230 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 S+VP V PQRI P L++ L+ P++I++H HP E + + A +RLA+ GI L S Sbjct: 231 IGSKVPAVLPQRITPNLVRMLRRY-HPLFISLHFTHPDEITPDTALACNRLADGGIPLGS 289 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL G+NDD E + LM V R++PYY++ D G+SHFR ++ G I+ L+ Sbjct: 290 QTVLLSGVNDDVETMKRLMHGLVRNRVRPYYMYQCDPIPGSSHFRTPVDTGLSIIQGLRG 349 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG C P Y++D PGG GKV + + + ++ + + YP + Sbjct: 350 HTSGYCIPTYVIDAPGGGGKVPLQPGYFQGRDEQGVVLRNYEDRIFHYPDQ 400 >gi|288817647|ref|YP_003431994.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6] gi|288787046|dbj|BAI68793.1| L-lysine 2,3-aminomutase [Hydrogenobacter thermophilus TK-6] gi|308751245|gb|ADO44728.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobacter thermophilus TK-6] Length = 367 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 124/348 (35%), Positives = 207/348 (59%), Gaps = 4/348 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ L + +D+ + E+++ I+ Y +A+TP +LI P +PNDPI Q Sbjct: 18 WQIKNR-LKTREDIQKYIKLLPEEVEGIERTKGIYPLAITPHYFSLIEPEDPNDPIRLQC 76 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP++EE++ + +P + G+ HRY DR+LL + C VYCR C R+ + + Sbjct: 77 IPRREEVDENAQRLGEPDPFREEGQVPGLTHRYRDRVLLSVTTFCAVYCRHCMRKRIF-A 135 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q S+++ + YI+E +I +V+ +GG+PL LS+++L+ +L LR IKHV+I+RF Sbjct: 136 QGERSRSTEELRKMIEYIKEHEEIRDVLISGGEPLSLSYEKLEYLLSQLRKIKHVEIIRF 195 Query: 181 HSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +R+ ++ PQR + +L+ L++ P++I H NHP E +EEA A+ RL GI + + Sbjct: 196 GTRLLVLAPQRFFDNKLLDILEKYS-PIWINTHFNHPKEITEEAEEAVERLLRRGIPINN 254 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLKG+ND+P+ + L R + +++KP YL H D G HFR +I++G +I+ L+ Sbjct: 255 QTVLLKGVNDNPQTMLELFRGLLRIKVKPQYLFHCDPVKGAVHFRTSIDKGLEIMEYLRG 314 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +ISG+ P Y +DLPGG GKV + + I + V +Y Sbjct: 315 RISGMGIPTYAVDLPGGKGKVPLMPNYIINREGDKFTFRSPFGDVVEY 362 >gi|310778246|ref|YP_003966579.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926] gi|309747569|gb|ADO82231.1| glutamate 2,3-aminomutase [Ilyobacter polytropus DSM 2926] Length = 418 Score = 433 bits (1114), Expect = e-119, Method: Composition-based stats. Identities = 122/347 (35%), Positives = 188/347 (54%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL ++ ++ + L + +++ +EIK + Y A++P A LI+P N D I Sbjct: 64 WQLINR-ISDIETLSLIVNLTEKEKEEIKNVGATYRWAISPYYAALIDPENKYDSIRLLS 122 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E PE DP+G+ +P I RYPDR+++ + C +YCR C RR +G Sbjct: 123 VPTGSE-AAHPEGEVDPMGEEFTNPAGSITRRYPDRLIINTTNECAMYCRHCQRRRNIG- 180 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T S ++ YI+ +I +V+ TGGD L LS KRL+ +LK L+ I HV +R Sbjct: 181 ETDTHKSDAVIMESIDYIRNNPEIRDVLLTGGDVLCLSDKRLEWILKELKSIPHVDYIRL 240 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQRI EL+ LK+ +P+YI H NHP E + E A +LAN GI L +Q Sbjct: 241 GTRTLVTMPQRITDELVDMLKKY-QPIYINTHFNHPKEITPEVKEACDKLANGGISLGNQ 299 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL GIN+D ++ L +++R++PYY+ H GT HF ++++G +I+ L+ Sbjct: 300 AVLLNGINNDKYVMRLLNHEMLKIRVRPYYIFHAKHVKGTLHFNTSVDDGIEIMEYLRGY 359 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG+ P YI++ P G GK I + S I +V DY Sbjct: 360 TSGMAIPTYIINAPKGQGKTPIMPQYLLSRSKNSVKIRTWEGVVIDY 406 >gi|289548297|ref|YP_003473285.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM 14484] gi|289181914|gb|ADC89158.1| lysine 2,3-aminomutase YodO family protein [Thermocrinis albus DSM 14484] Length = 367 Score = 432 bits (1111), Expect = e-119, Method: Composition-based stats. Identities = 120/349 (34%), Positives = 200/349 (57%), Gaps = 6/349 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + + +L + E+ + I+ Y +A+TP +LI+PH+P DPI Q Sbjct: 18 WQIQNR-IKTIHELTRYIKLLPEEEEGIRRTQGLYPMAITPYYLSLIDPHDPQDPIRLQA 76 Query: 61 IPQKEELNIL--PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 IP+ E + ED + + + + HRYPDR+L+++ C VYCR C R+ + Sbjct: 77 IPRAIETDPYVQSYGEEDALREEGQ--IPHMTHRYPDRVLVRVTTFCAVYCRHCMRKRIF 134 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 SQ ++ ++ + + YI+ + +V+ +GGDPL LS+++L+ +L LR I HV+I+ Sbjct: 135 -SQGERSITKEEIDTIIQYIEAHPSVRDVLLSGGDPLSLSYEKLEYILSRLRRIPHVEII 193 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R +R+P++ PQR E + L E P++I H NHP E + A A+ L GI + Sbjct: 194 RIGTRLPVLAPQRFFDEKLLKLLERYSPIWINTHFNHPKEITPYAAEAVENLLRHGIPVN 253 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKG+NDDP+++ LMR+ + +++KP YL H D G HFR ++E+G +I+ L+ Sbjct: 254 NQTVLLKGVNDDPQVMLELMRSLLRIKVKPQYLFHCDPIKGAIHFRTSLEKGLEIMDFLR 313 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 KISG+ P Y +DLPGG GKV + + + Y + +Y Sbjct: 314 GKISGMGIPTYAVDLPGGKGKVPLLPSYLVRKEGNRYTFRSFTGELVEY 362 >gi|83310383|ref|YP_420647.1| lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1] gi|82945224|dbj|BAE50088.1| Lysine 2,3-aminomutase [Magnetospirillum magneticum AMB-1] Length = 344 Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 169/343 (49%), Positives = 230/343 (67%), Gaps = 6/343 (1%) Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 +TL +AQDL++A LI ++ + ++ Y++ALTP + +LI+P +P DPIARQ++P Sbjct: 4 RRTLRTAQDLHDAGLIPS--VEAVAGVAEAYAVALTPAVVDLIDPADPADPIARQYVPSA 61 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 EEL PEE DPIGD +SP+KG+VHRYPDR+LL L VCPVYCRFCFRR VG Sbjct: 62 EELVTTPEELADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVGD-GDA 120 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 ++ + + ALAY+ + +I EVI TGGDPL+L RL +L + I HV+++R HSRV Sbjct: 121 TMTEAEIDTALAYVAGRPEIREVILTGGDPLMLPPPRLAALLGRIGAIAHVELIRIHSRV 180 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+ DP+R+ P+L + L KPV++A+H NHP+E S A + RLA G+ LLSQ+VLL Sbjct: 181 PVSDPERVTPDLARVLGGGDKPVWLAVHVNHPHELSPLARGGLERLARTGVPLLSQTVLL 240 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 KG+ND +L L R V R++PYYLHHPDLA GTSHFR TIEEGQ ++ SL+ ++SG+ Sbjct: 241 KGVNDSVSVLDELFRALVRNRVRPYYLHHPDLAPGTSHFRPTIEEGQALMRSLRGRLSGI 300 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 QP Y+LD+PGG GKV + + D +HDY Sbjct: 301 AQPTYVLDIPGGAGKVPVGPQYWDGEAG---TVADPGGRLHDY 340 >gi|316934333|ref|YP_004109315.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas palustris DX-1] gi|315602047|gb|ADU44582.1| lysine 2,3-aminomutase YodO family protein [Rhodopseudomonas palustris DX-1] Length = 363 Score = 431 bits (1110), Expect = e-119, Method: Composition-based stats. Identities = 180/350 (51%), Positives = 246/350 (70%), Gaps = 4/350 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL ++L + + E++ Y+IA+TP +A LI+ +P+DPIARQ+IP+ EE Sbjct: 14 TLRHPEELIAEGFAAADGRATLTEVAARYAIAVTPAVAALIDRDDPDDPIARQYIPRAEE 73 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ L ER+DPIGD H+P++GIVHR+ DR+L K +HVC VYCRFCFRREMVG K L Sbjct: 74 LSSLAFERDDPIGDAAHAPVEGIVHRHRDRVLFKPVHVCAVYCRFCFRREMVGPGKDNAL 133 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + T AAL YI+ +IWEVIFTGGDPL+LS +RL +++ L I+HV+I+RFH+R+P+ Sbjct: 134 SREATAAALDYIRAHDEIWEVIFTGGDPLMLSPRRLSEIMAELAAIEHVKIVRFHTRLPV 193 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP RI P+L+Q L+ K ++A+HANHP EF+ A A +R+ +AGI ++SQSVLL+G Sbjct: 194 ADPTRITPDLVQALRTPSKTTWLALHANHPREFTAAARVACARIIDAGIPMVSQSVLLRG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDDP+ L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ +SGLCQ Sbjct: 254 VNDDPDTLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRALRGNVSGLCQ 313 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKSS 352 P Y+LD+PGGYGK + + + N Y + D+ VH YPP+S Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLLDADGTDPNSRYRVADYCGEVHLYPPRSG 363 >gi|258513920|ref|YP_003190142.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum acetoxidans DSM 771] gi|257777625|gb|ACV61519.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum acetoxidans DSM 771] Length = 432 Score = 431 bits (1108), Expect = e-118, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 201/347 (57%), Gaps = 5/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ H+ + + L + + +E+ +I+++ + +++P A+LI P + NDP+ Q Sbjct: 74 WQISHR-INDVELLSSLIQLSEERCAQIRKVGLKFRWSVSPYYASLIVPDSLNDPVMLQS 132 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +EL++ DP+ + SP I RYPDR+++ + + C +YCR C RR +G Sbjct: 133 VPSIKELDVSGY--ADPMAEELTSPAPCITRRYPDRLIINVTNKCAMYCRHCQRRRGIGD 190 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + +D AAL YI++ +I +V+ TGGD L+LS K++ +L L IKHV+I R Sbjct: 191 -VDRHQTHQDLLAALDYIRKNKEIRDVLITGGDALLLSDKKIDWLLSELDSIKHVEIKRL 249 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQRI PEL + LK+ PVYI NHP E + E+ A L +AG++L +Q Sbjct: 250 GTRTIVTLPQRITPELCEVLKQHP-PVYINTQFNHPQEITPESKLACDMLVSAGVVLGNQ 308 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGIN++P ++ L + +++R++PYY+ H GT HF ++ EG +I+ L+ Sbjct: 309 AVLLKGINNNPHVMKKLNQELLKIRVRPYYIFHAKQVIGTRHFITSVNEGIEIMEKLRGY 368 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P YI++ P GYGK+ I + + N S + + N DY Sbjct: 369 TSGLAVPTYIINAPNGYGKIPILPKYLLGIDNSSVRLRNWENRQIDY 415 >gi|197118777|ref|YP_002139204.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem] gi|197088137|gb|ACH39408.1| L-lysine 2,3-aminomutase [Geobacter bemidjiensis Bem] Length = 344 Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 129/343 (37%), Positives = 197/343 (57%), Gaps = 11/343 (3%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TS ++L + Q + Y + +TP LI P DPI RQ +P EL Sbjct: 12 ITSPEELSGLFRL---QGGAFSPVVERYPMRITPYYLGLI--EEPGDPIWRQCVPDPAEL 66 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + L + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG ++ Sbjct: 67 DDL-TQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGC---ASMA 122 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + A+AYI +I +V+ +GGDPL+L RL +L L I HV+I+R +R P+ Sbjct: 123 PAKVDDAIAYIAGDPRIRDVVLSGGDPLLLPDDRLAAILSALSRIPHVEIVRIGTRAPVT 182 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P+RI P L + LK + PVY+ H NHP E + ++ A +RLA+AG+ L +Q+VLLKG+ Sbjct: 183 LPERITPGLTRLLKRS-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTVLLKGV 241 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 NDDP+ + +LMR + +R++PYY+H DL GT+HFR + +G ++ +L+ SGL P Sbjct: 242 NDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVGQGISVMQALRGHTSGLAVP 301 Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 Y++DLPGG GKV + G + T++ +YP Sbjct: 302 HYVIDLPGGKGKVDV-LSGRPGSGGRTLLFTNYLGEEIEYPEP 343 >gi|92117823|ref|YP_577552.1| hypothetical protein Nham_2300 [Nitrobacter hamburgensis X14] gi|91800717|gb|ABE63092.1| L-lysine 2,3-aminomutase [Nitrobacter hamburgensis X14] Length = 366 Score = 430 bits (1107), Expect = e-118, Method: Composition-based stats. Identities = 180/354 (50%), Positives = 242/354 (68%), Gaps = 10/354 (2%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +DL L + ++ ++ Y+IA+TP +A+LI+P +P+DPIARQ++P +E Sbjct: 12 TLRQPEDLIAHGLAPAAALPDLARVAARYAIAVTPEVASLIDPDDPDDPIARQYLPSVDE 71 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L P ER DPIGD HSP+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K T L Sbjct: 72 LAAQPGERADPIGDRAHSPVDGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPAKETAL 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S AAL YI+ ++WEVI TGGDPL+LS +RL +++ L I HV+I+R HSRVP+ Sbjct: 132 SKSAATAALDYIRSHPEVWEVILTGGDPLMLSPRRLAEIMAELAGIGHVKIVRIHSRVPV 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP R++ E++ LK AG ++A+HANHP E + A +A +R+ +AGI ++SQSVLL+G Sbjct: 192 ADPTRVSDEMVAALKAAGATTWLALHANHPRELTAAARSACARIVDAGIPMVSQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMR FVE RIKPYYLHH DLA GT+H R T+E+G+ ++ +L+ ++SGLCQ Sbjct: 252 VNDDAATLEALMRAFVECRIKPYYLHHGDLAPGTAHLRTTLEQGRALMRALRGRVSGLCQ 311 Query: 307 PFYILDLPGGYGKVKIDTHNI----------KKVGNGSYCITDHHNIVHDYPPK 350 P Y+LD+PGGYGK + + + Y I D+ VH YPPK Sbjct: 312 PDYVLDIPGGYGKSPVGPDYLSQSDLTFGEGEHRPESRYRIVDYCGGVHLYPPK 365 >gi|307322539|ref|ZP_07601885.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti AK83] gi|306891821|gb|EFN22661.1| lysine 2,3-aminomutase YodO family protein [Sinorhizobium meliloti AK83] Length = 377 Score = 430 bits (1106), Expect = e-118, Method: Composition-based stats. Identities = 122/362 (33%), Positives = 191/362 (52%), Gaps = 17/362 (4%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + ++T+ ++L + E+ + ++S Y +TP +LIN + NDP+ Q Sbjct: 17 WQLAN-SVTTIEELKLYVNVSPEEEEAFHQVSERYGFRVTPYYLSLINKEDRNDPVRLQA 75 Query: 61 IPQKEELNIL------------PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108 +P EL L + E+P+ + + IVHRYPDR+L L + C Y Sbjct: 76 VPDIRELQDLFHVEQLPSFHRSAVDSENPLWKEGRTDVGCIVHRYPDRVLFHLTNFCATY 135 Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 CR C R+ G Q + +AYI E+ +I +V+ +GGDPL L +L+ VL Sbjct: 136 CRHCSRKVHAG-QGSIATDRTQIDEGIAYIAERPEIRDVLLSGGDPLTLPDSKLEYVLSR 194 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 LR + HVQI+R +R P+ PQRI E + +K+ P++I H NHP E + EA AI Sbjct: 195 LRQLPHVQIIRIGTRTPVTMPQRITSEFCRMVKKY-HPIWINTHFNHPNEITPEAKTAIE 253 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288 RL AG+ + +QSVLLKGIND E++ L+ + R++PYYL+H DL G HFR +I+ Sbjct: 254 RLLEAGVPVGNQSVLLKGINDTVEVMKELVHQLLIARVRPYYLYHADLVRGAEHFRTSID 313 Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 G I+ +L+ +G P Y++ P GK ++ + + G G + ++ P Sbjct: 314 VGMHIIENLRGHTTGFAVPQYVICTP--LGKTPLNPNYVIATGPGYIVLRNYEWRTWRDP 371 Query: 349 PK 350 + Sbjct: 372 DR 373 >gi|294507125|ref|YP_003571183.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8] gi|294343453|emb|CBH24231.1| lysine 2,3-aminomutase YodO family protein [Salinibacter ruber M8] Length = 401 Score = 429 bits (1104), Expect = e-118, Method: Composition-based stats. Identities = 116/350 (33%), Positives = 192/350 (54%), Gaps = 5/350 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + SA+ L ++ IK + + +TP A+L+ P +P+ P+ RQ Sbjct: 21 WQMQNR-IHSAEALRKWIHPTDDERAAIKRAGDAFRWNVTPYYAHLMAPDDPSCPVRRQA 79 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E + DP+ + H P+K ++H Y DR+ + C +YCR+C R+ MVG Sbjct: 80 VPTMDEFGPDIVDELDPLDETGHEPVKNLIHNYEDRVAFCVTAECAIYCRYCLRKRMVGD 139 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + +AA+ YI +I +V+ TGGDPL + L+ +L LR I HV+++RF Sbjct: 140 -AEYFMRTDEHQAAIDYIAAHDEIRDVLLTGGDPLTFNEANLEWLLSRLRAIDHVELIRF 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P+ P RI +L L + P++I H NHP E +++A AAI RL +AGI + +Q Sbjct: 199 GSRMPVKLPYRITDDLCDLLAQY-HPLWINTHFNHPKECTDDAAAAIGRLKDAGIPVGNQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+G+NDDP+ + L V +R++PYYL+ + GT H R IE G + L+ + Sbjct: 258 TVLLRGVNDDPDTMKALNEGLVRMRVRPYYLYQAQIIGGTGHLRTPIEVGMHTMRQLRGR 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG P Y+LD P +GKV ++ +K + + + P Sbjct: 318 TSGFAIPDYVLDTP--HGKVPLNRSYVKGRAGDHVLMESYDGTLWAEPNP 365 >gi|146340545|ref|YP_001205593.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278] gi|146193351|emb|CAL77367.1| putative lysine 2,3-aminomutase [Bradyrhizobium sp. ORS278] Length = 364 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 180/358 (50%), Positives = 238/358 (66%), Gaps = 10/358 (2%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R TL SA DL L + ++ ++ Y++A+T +A+LI+ +P+DPIARQF+P Sbjct: 6 RPTTLRSAADLVAQGLADPGEQATLERVAQRYAVAVTTHLADLIDSDDPDDPIARQFVPS 65 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 +EL P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K Sbjct: 66 ADELVGAPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 LS AL YI+ +IWEVI TGGDPL+LS +RL +++ L I+HV+I+R H+R Sbjct: 126 NALSEDAYCGALDYIRAHGEIWEVILTGGDPLMLSPRRLAEIMADLAAIEHVRIIRIHTR 185 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 +P+ DP RI P L++ LK G +++A+HANHP E S + AA +RL +AGI L+SQSVL Sbjct: 186 LPVADPARITPGLVEALKVKGAAIWVALHANHPRELSPDVRAACARLVDAGIPLVSQSVL 245 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ +L+ ++SG Sbjct: 246 LRGVNDDAATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLAEGQALIRALRGRVSG 305 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVG----------NGSYCITDHHNIVHDYPPKS 351 LCQP Y+LD+PGGYGK + I Y + D+ H YPP Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYITAEESVAQDHAAAAQTRYRVVDYCGEAHLYPPAG 363 >gi|222055869|ref|YP_002538231.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32] gi|221565158|gb|ACM21130.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. FRC-32] Length = 347 Score = 429 bits (1103), Expect = e-118, Method: Composition-based stats. Identities = 134/348 (38%), Positives = 201/348 (57%), Gaps = 11/348 (3%) Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q KT +T+ +L + E +I +++ Y + +T LI P D I RQ Sbjct: 4 WQKNLKTCVTAPDELSPLFNLDTE---DIAQVAKRYPMRITRYYLGLIER--PGDAIWRQ 58 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 IP E + EDP+ + SP+ G++HRYPDR++ + VC VYCRFC R+ VG Sbjct: 59 CIPDPLEFEDQA-QMEDPLDEELLSPVPGLIHRYPDRVVWLVSSVCAVYCRFCMRKRRVG 117 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + T ++ +A LAYI +I +VI +GGDP +L L+++L LR I HV+I+R Sbjct: 118 CTEATETGTR--QAVLAYIANHPEIRDVILSGGDPFLLEDDVLEEILSGLRQIHHVEIIR 175 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +R + P+RI L + LK+ P+Y+ H NHP E + + A +RLA+AGI L + Sbjct: 176 IGTRTTVTLPERITTGLCRMLKKF-HPIYVNTHFNHPKEITAASARACARLADAGIPLGN 234 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLKGINDDP+++ LM+ +++R+KPYYLH DL GT+HFR +I+ G +I+ L+ Sbjct: 235 QTVLLKGINDDPQVMKRLMQLLLKIRVKPYYLHQMDLVRGTAHFRTSIDRGLQIMEGLRG 294 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P+Y +DL GG GKV + + + + S I + V Y Sbjct: 295 HTSGLASPYYAIDLEGGKGKVPLLPEYV-RRDDDSLLIRSYRGEVVRY 341 >gi|169831230|ref|YP_001717212.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis audaxviator MP104C] gi|169638074|gb|ACA59580.1| lysine 2,3-aminomutase YodO family protein [Candidatus Desulforudis audaxviator MP104C] Length = 419 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 123/350 (35%), Positives = 186/350 (53%), Gaps = 4/350 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R + +T+ + L + ++ I +I ++S Y A++P A ++ PI Q Sbjct: 73 WQMRKR-ITTVEVLARFMELNRDDIHDIDKVSRQYRWAVSPYYAAVMAVGGVKGPIWAQA 131 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E+ DP+ + SP+ GI RYPDR+++ + + C +YCR C RR +G Sbjct: 132 VPSTAEITDARG-TTDPMAERLTSPVPGITRRYPDRLIINVTNQCAMYCRHCQRRRNIG- 189 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + EAAL YI+E +I +V+ TGGD L+LS L +L L I HV+I R Sbjct: 190 EVDRHQPRRVLEAALQYIRENPEIRDVLITGGDALLLSDTVLDWLLGELHSIPHVEIKRL 249 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQRI L L+ P+YI NHP E + EA+ A RL AG++L +Q Sbjct: 250 GTRALVTLPQRITAGLCAVLERYP-PIYINSQFNHPLEVTPEAVQACDRLVRAGVVLGNQ 308 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGIN+DP ++ L + R++PYY+ H GTSHF +EEG I+ L+ Sbjct: 309 AVLLKGINNDPHVMKKLNHELLRARVRPYYIFHAKPVRGTSHFITPVEEGLAIMEQLRGY 368 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SGL P YI++ PGGYGK + + + + N V YP + Sbjct: 369 TSGLAVPTYIINAPGGYGKTPVTPSYVVDHNDQRLVLRTWENRVLPYPNR 418 >gi|168699149|ref|ZP_02731426.1| lysine 2,3-aminomutase YodO family protein [Gemmata obscuriglobus UQM 2246] Length = 481 Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats. Identities = 119/349 (34%), Positives = 198/349 (56%), Gaps = 4/349 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q ++ ++ S + L E+++ + E+ + Y +A+ P +LI+P +PNDPI Q Sbjct: 50 WQTQN-SIRSVRQLRTLLSFTPEELEALGELESEYKLAIPPYFFSLIDPEDPNDPIRLQS 108 Query: 61 IPQKEELNILPEER-EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E +DP+ + SP+ G+ HRY DR LL C +YCR+C R+ Sbjct: 109 VPSPLEAESASGHELDDPLEEEKDSPVPGLTHRYSDRALLVTTPNCTMYCRYCTRKRATL 168 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 ++ G S D E + Y++E +I +VI +GGDPL L +L+ L++L+ +KHV ++R Sbjct: 169 TRGGWEGVSADDERMIQYVREHREIKDVIVSGGDPLTLPMGKLRYYLESLKAMKHVDVIR 228 Query: 180 FHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 +RVP+ PQR+ +PELI L A K VY+ H NHP E + EA+ A L AG+ + Sbjct: 229 VGTRVPVTLPQRLYDPELIDLLGSAEK-VYVQTHFNHPREVTPEAVRACKSLLRAGVPIN 287 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 + +VLLKG+NDD + +L R + +++PYYL H D G HFR ++ +G +I+ L+ Sbjct: 288 NHTVLLKGVNDDVGTMRSLFRALLRAKVRPYYLFHCDPVTGAGHFRTSVWKGLEIMEGLR 347 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +SG+ P Y++D P G GK+ I + + + + + ++ ++ Y Sbjct: 348 GHMSGIGIPTYVVDGPQGSGKIPILPNYLISMSDDVVVLRNYEGMIVRY 396 >gi|23014062|ref|ZP_00053900.1| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum MS-1] Length = 343 Score = 427 bits (1098), Expect = e-117, Method: Composition-based stats. Identities = 170/346 (49%), Positives = 231/346 (66%), Gaps = 6/346 (1%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 +R TL +AQDL +A LI+ +++++ Y++ LTP + +LI+P +P DPIARQ++P Sbjct: 4 VRRHTLRTAQDLLDAGLIRDA--AAVEQVARTYAVGLTPAVVDLIDPADPADPIARQYVP 61 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 EEL EER DPIGD +SP+KG+VHRYPDR+LL L VCPVYCRFCFRR VG Sbjct: 62 SPEELTTTAEERADPIGDAAYSPVKGLVHRYPDRVLLTPLLVCPVYCRFCFRRARVGD-G 120 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 ++ + EAALAY+ + I EVI TGGDPL+L RL +L + I HV+++R HS Sbjct: 121 EATMTEAEIEAALAYVACRPDIREVILTGGDPLMLPAPRLGALLDRIGAIGHVELIRIHS 180 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 RVP+ DP RI P+L L KPV++A+H NHP E S A A +S LA AG+ LLSQ+V Sbjct: 181 RVPVSDPGRITPDLATVLGGGDKPVWLAVHVNHPREVSPLASAGLSMLARAGVPLLSQTV 240 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKG+ND ++L +L R + R++PYYLHHPDLA GTSHFR +I+EGQ ++ L+ ++S Sbjct: 241 LLKGVNDRADVLDDLFRALIRNRVRPYYLHHPDLAPGTSHFRPSIKEGQALMRVLRGRLS 300 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 G+ QP Y+LD+PGG GKV + + D ++ H YP Sbjct: 301 GIAQPTYVLDIPGGAGKVPVGPGYWDGEEG---VVIDPNDAEHSYP 343 >gi|144898375|emb|CAM75239.1| Protein of unknown function DUF160 [Magnetospirillum gryphiswaldense MSR-1] Length = 353 Score = 426 bits (1097), Expect = e-117, Method: Composition-based stats. Identities = 161/345 (46%), Positives = 228/345 (66%), Gaps = 5/345 (1%) Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 ++L DL A L+ + Q + ++ IA+TP +A+LI+ + DPIARQ++P Sbjct: 12 SRSLRRVDDLIGAGLVDESQRAALDAVARSSVIAITPAVADLIDAGDAADPIARQYVPNA 71 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 EL++ EER DPIGD+ SP+KG+VHRYPDR LLK + VCPVYCRFCFRRE VG GT Sbjct: 72 AELHVAAEERADPIGDDAFSPVKGVVHRYPDRALLKPILVCPVYCRFCFRREAVGDADGT 131 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 LS+ + + ALAY+ ++ + E+I TGGDPL+L+ RL ++ + + H+++LRFHSRV Sbjct: 132 -LSAAELDEALAYLAGQTDLREIIVTGGDPLMLNAARLADLVARIAQLPHIEVLRFHSRV 190 Query: 185 PIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 P+ DP+R++ + LK V++++H NHP E S A A+ RLA+AG+ L+SQSVL Sbjct: 191 PVADPERVSSAMASALKSTETLAVWVSVHVNHPRELSAIAGKALRRLADAGVPLVSQSVL 250 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 LKG+NDDP +L L R + R++PYYLHHPDL GTSHFR ++ EGQ I+ +L+ ++SG Sbjct: 251 LKGVNDDPAVLEELFRALIRNRVRPYYLHHPDLTRGTSHFRPSLAEGQAIMRALRGRLSG 310 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 + QP Y+LD+PGG GKV + +TD H YP Sbjct: 311 IAQPTYVLDIPGGAGKVPVGPDW---WDGERLQVTDWRGRRHPYP 352 >gi|253700443|ref|YP_003021632.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21] gi|251775293|gb|ACT17874.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M21] Length = 344 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 129/343 (37%), Positives = 195/343 (56%), Gaps = 11/343 (3%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +TS ++L + Q + + Y + +TP LI DPI RQ +P EL Sbjct: 12 ITSPEELSGLFRL---QGRDFSPVVERYPMRITPYYLGLIEEQG--DPIWRQCVPDPAEL 66 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 P + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG ++ Sbjct: 67 CD-PSQSPDPLDEERLSPVPGLIHRYPDRVVWIVSSACAVYCRFCMRKRGVGC---ASMA 122 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + A+AYI +I +V+ +GGDPL+L L +L L I HV+I+R SRVP+ Sbjct: 123 PARVDDAIAYIAGDQRIRDVVLSGGDPLLLPDDCLAGILSALSRIPHVEIVRIGSRVPVT 182 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P+RI P L + LK PVY+ H NHP E + ++ A +RLA+AG+ L +Q+VLLKG+ Sbjct: 183 LPERITPGLARLLKRH-HPVYVNTHFNHPREITPQSAKACARLADAGVQLGNQTVLLKGV 241 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 NDDP+ + +LMR + +R++PYY+H DL GT+HFR + +G ++ +L+ SGL P Sbjct: 242 NDDPQTMLSLMRRLLAIRVRPYYIHQMDLVQGTAHFRTRVAQGISVMQALRGHTSGLAVP 301 Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 Y++DLPGG GKV + + G T++ +YP Sbjct: 302 HYVIDLPGGKGKVDVLSGRPGSDGRN-LVFTNYKGEEIEYPEP 343 >gi|322419288|ref|YP_004198511.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18] gi|320125675|gb|ADW13235.1| lysine 2,3-aminomutase YodO family protein [Geobacter sp. M18] Length = 343 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 136/342 (39%), Positives = 209/342 (61%), Gaps = 11/342 (3%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + +TS ++L + Q ++ + Y + +TP LI P DPI RQ +P E Sbjct: 10 RCITSPEELSGLF---RSQGADLTCVVRRYPMRITPYYLGLIRE--PGDPIWRQCVPDPE 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 ELN + + DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG Q Sbjct: 65 ELNDV-TQSPDPLDEERLSPVPGLIHRYPDRVVFLVSTACAVYCRFCMRKRGVGCQG--- 120 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 +S + ++AYI K QI +VI +GGDPL+LS RL +L LR I HV+I+R +RVP Sbjct: 121 MSPAPVDQSVAYIASKPQIRDVILSGGDPLLLSDDRLDGILTALRRIPHVEIIRIGTRVP 180 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + P+RI +L + LK +P+Y+ H NHP E +E++ A +RLA+AGI L +QSVLLK Sbjct: 181 VTLPERITVKLARLLKRH-QPLYLNTHFNHPREITEQSARACARLADAGIQLGNQSVLLK 239 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDP+++ LM+ + +R++PYY+H DL GT+HFR + +G ++A+L+ SGL Sbjct: 240 GVNDDPQVMRELMQRLLAIRVRPYYIHQMDLVQGTAHFRTRVADGVAVMAALRGHTSGLA 299 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y++DLPGG GKV++ + G ++++ +Y Sbjct: 300 VPHYVIDLPGGKGKVEVTSARFSGDG-SRLTVSNYLGEEIEY 340 >gi|237755590|ref|ZP_04584206.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5] gi|237692253|gb|EEP61245.1| L-lysine 2,3-aminomutase [Sulfurihydrogenibium yellowstonense SS-5] Length = 374 Score = 426 bits (1096), Expect = e-117, Method: Composition-based stats. Identities = 122/345 (35%), Positives = 194/345 (56%), Gaps = 6/345 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ +TS +L IK E+ + +IS + TP +LINP++ NDPI +Q Sbjct: 28 WQIANR-ITSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQI 84 Query: 61 IPQKEELNILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 +P +E++ +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M Sbjct: 85 LPDIKEIDEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMF 144 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + ++ +A YI+ I EV+ +GGDPL L +K+++ +LK L I H+ ++ Sbjct: 145 -LEDERARTKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVI 203 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R SR +V+P R E + L E V++ H NHP E + E A+ + + G +L Sbjct: 204 RIGSRELVVNPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVL 263 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKGIND E + NLMR ++++IKPYYL D G HFR +E G +I+ L+ Sbjct: 264 NQTVLLKGINDSKETIENLMRDLLKVKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLR 323 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 ++SGL P + +DL GG GKV + + I + ++ N Sbjct: 324 GRLSGLGIPTFAVDLLGGLGKVPVLPNYIIEKNEDYIVFRNYENK 368 >gi|115524934|ref|YP_781845.1| hypothetical protein RPE_2928 [Rhodopseudomonas palustris BisA53] gi|115518881|gb|ABJ06865.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisA53] Length = 361 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 177/349 (50%), Positives = 244/349 (69%), Gaps = 4/349 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL S +L L EQ+ + E+++ Y++A+T +A+LI+P +PNDPIARQ+IP + Sbjct: 12 RTLRSPAELVARGLAPAEQLAALDEVASRYAVAVTAAVADLIDPADPNDPIARQYIPSAQ 71 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL I ER DPIGD HSP+ GIVHR+ DR+L KL+ VC VYCRFCFRREMVG K + Sbjct: 72 ELVISAAERADPIGDAAHSPVAGIVHRHADRVLFKLVSVCAVYCRFCFRREMVGPGKDSA 131 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS + AA+ YI+ +IWEVI TGGDPL+LS +RL++V+ L I+HV+I+RFH+RVP Sbjct: 132 LSPQAYRAAIDYIRAHGEIWEVILTGGDPLMLSPRRLEEVMADLAAIEHVKIVRFHTRVP 191 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + +P RI+ +L+ LK G ++A+HANHP E + A AA +R+ +AGI ++SQSVLL+ Sbjct: 192 VAEPSRISRDLVAALKADGVTTWVALHANHPRELTAAARAACARMVDAGIAMVSQSVLLR 251 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDD + LA LMR FVE RIKPYYLHH DLA GT+H R T+ EG++++ L+ ++SGLC Sbjct: 252 GVNDDADTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGRELMRQLRGRVSGLC 311 Query: 306 QPFYILDLPGGYGKVKIDTHNI----KKVGNGSYCITDHHNIVHDYPPK 350 QP Y+LD+PGG+GK + + V Y + D+ H YPP Sbjct: 312 QPDYVLDIPGGFGKAPVGPEYLSPVASSVETQHYRVMDYCGDTHLYPPA 360 >gi|188996732|ref|YP_001930983.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188931799|gb|ACD66429.1| lysine 2,3-aminomutase YodO family protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 374 Score = 426 bits (1095), Expect = e-117, Method: Composition-based stats. Identities = 122/345 (35%), Positives = 192/345 (55%), Gaps = 6/345 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++T TS +L IK E+ + +IS + TP +LINP++ NDPI +Q Sbjct: 28 WQIANRT-TSLNELKQIIPIKNEE--DFLKISEIFHFGTTPYYISLINPNDENDPILKQI 84 Query: 61 IPQKEELNILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 +P +E++ +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M Sbjct: 85 LPDIKEIDEKYQEGAFLDPFLEDVKSPVPGLTHRYPDRVLFRATNFCSVYCRHCMRKRMF 144 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + ++ +A YI+ I EV+ +GGDPL L +K+++ +LK L I H+ ++ Sbjct: 145 -LEDERARTKEEYDAMFEYIRNNKSIKEVLISGGDPLTLPNKKIEYILKNLYEISHIDVI 203 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R SR + +P R E + L E V++ H NHP E + E A+ + + G +L Sbjct: 204 RIGSRELVANPYRFYDEKLLQLFEKYDKVWLITHFNHPNEITSETKKAVKNILSTGTPVL 263 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKGIND E + NLMR ++ +IKPYYL D G HFR +E G +I+ L+ Sbjct: 264 NQTVLLKGINDSKETIENLMRDLLKAKIKPYYLFQCDPTKGVYHFRTPLEVGLEIMEYLR 323 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 ++SGL P + +DL GG GKV + + I + ++ N Sbjct: 324 GRLSGLGIPTFAVDLLGGLGKVPVLPNYIIEKNEDYIVFRNYENK 368 >gi|301058169|ref|ZP_07199221.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2] gi|300447801|gb|EFK11514.1| putative L-lysine 2,3-aminomutase [delta proteobacterium NaphS2] Length = 354 Score = 425 bits (1094), Expect = e-117, Method: Composition-based stats. Identities = 132/337 (39%), Positives = 201/337 (59%), Gaps = 6/337 (1%) Query: 12 QDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILP 71 + + + + +++K + + Y + + P LI N DPI RQ +P EL+ Sbjct: 19 ESIMEPDALPSSHPEKLKRVISRYPMRINPYYLGLIREKN--DPIYRQSMPDIRELDDKG 76 Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 DP+ + HSP++G+ HRYPDR+LL + C VYCRFC R+ VG + +++ + Sbjct: 77 AAP-DPLNEEGHSPVRGLTHRYPDRVLLLVSSECAVYCRFCNRKRKVG--RPGMVTDRSI 133 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 E + YI+ ++ +V+ +GGDPL+L RL ++L L I HV+I+R +RVP PQR Sbjct: 134 EEGIDYIRAHREVRDVLLSGGDPLLLEDARLGEILSALHAISHVEIIRIGTRVPCTLPQR 193 Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 I PEL L++ P+Y+ +H NHP E + EA A +RLA+AGI L Q+VLLKG+NDDP Sbjct: 194 ITPELAGLLQKF-HPLYMNVHFNHPLEITAEATLACNRLADAGIPLGCQTVLLKGVNDDP 252 Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 ++ LMR + +R+KPYYL H D A GTSHFR ++ G I+ L+ SGLC P + + Sbjct: 253 SVMQELMRKLLIIRVKPYYLFHGDPARGTSHFRTSVSRGLNIIRELQGHTSGLCVPHFAI 312 Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 DL GG GKV + ++ +GS +T++ + +P Sbjct: 313 DLLGGGGKVPLLPDYLQGREDGSLLVTNYRGNAYRHP 349 >gi|147676951|ref|YP_001211166.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI] gi|146273048|dbj|BAF58797.1| lysine 2,3-aminomutase [Pelotomaculum thermopropionicum SI] Length = 423 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 118/347 (34%), Positives = 186/347 (53%), Gaps = 5/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ H+ ++ + L + Q +IK + Y A++P A+L+ +DPI Q Sbjct: 75 WQMSHR-ISDSGALAELFGFNEMQCAQIKRVGMRYRWAISPYYASLMEGDIEHDPIRLQS 133 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EELN DP+ + SP + RYPDR+++ + + C +YCR C RR +G Sbjct: 134 VPSIEELNETGH--PDPMAEELTSPAPCVTRRYPDRLIINVTNKCAMYCRHCQRRRNIG- 190 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + AAL YI++ +I +V+ TGGD L+LS ++ +L L IKHV+I R Sbjct: 191 EVDRHSPHESLVAALEYIRKNREIRDVLITGGDALLLSDSKIDWLLSELDKIKHVEIKRL 250 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQRI PEL LK+ P+Y+ NHP E + E+ A LA AG++L +Q Sbjct: 251 GTRAIVTLPQRITPELCDVLKKHP-PIYVNTQFNHPREVTPESKQACDMLAEAGVVLGNQ 309 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+N+DP ++ L + +++ ++PYY+ H GT HF ++EG I+ L+ Sbjct: 310 AVLLKGVNNDPHVMKKLNQELLKIMVRPYYIFHAKPVKGTLHFITAVDEGISIMEKLRGY 369 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P YI++ P GYGK + + + N V +Y Sbjct: 370 TSGLAVPTYIINAPNGYGKTPVLPCYVLGNNGDKIKLRTWENRVLEY 416 >gi|150390499|ref|YP_001320548.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus metalliredigens QYMF] gi|149950361|gb|ABR48889.1| lysine 2,3-aminomutase YodO family protein [Alkaliphilus metalliredigens QYMF] Length = 422 Score = 425 bits (1093), Expect = e-117, Method: Composition-based stats. Identities = 117/348 (33%), Positives = 190/348 (54%), Gaps = 4/348 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL ++ ++ L + ++I++IK++ + +++P LI+ +N PI Sbjct: 67 WQLSNR-ISDVDTLTKIIKLDDKEIEDIKKVGQEFRWSVSPYYTTLIDDNNKYCPIKLMA 125 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP E+ + DP+ + +P I RYPDR+++ + + C +YCR C RR +G+ Sbjct: 126 IPHGYEIANTKGD-TDPMAEEFTNPAGSITRRYPDRLIINVTNECAMYCRHCQRRRNIGT 184 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 S + + ++ YI++ +I +V+ TGGD L LS+ L +L L I V +R Sbjct: 185 -NDLHTSREVLQESIDYIRDNPEIRDVLITGGDALTLSNSMLDWLLGELHAIPSVDYIRL 243 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR + PQRI +LI LK+ P++I H NHP E +EE+ AA RL+NAGI L +Q Sbjct: 244 GSRTLVTMPQRITDKLINILKKYP-PIFINTHFNHPMEITEESKAACDRLSNAGIPLGNQ 302 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL GIN++ ++ L ++ R++PYY+ H GTSHF ++++G +I+ L+ Sbjct: 303 AVLLNGINNNKFVMRLLNHELLKCRVRPYYIFHAKHVIGTSHFNTSVDDGIEIMEYLRGY 362 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG+ P YI++ PGG GK I + G+ S I V DYP Sbjct: 363 TSGMAIPTYIINAPGGKGKTPILPQYLISRGSHSIKIRTWDGEVIDYP 410 >gi|225849905|ref|YP_002730139.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1] gi|225646470|gb|ACO04656.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Persephonella marina EX-H1] Length = 378 Score = 424 bits (1092), Expect = e-117, Method: Composition-based stats. Identities = 124/346 (35%), Positives = 194/346 (56%), Gaps = 5/346 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ + S Q+L I K++ + +++S + TP +L+ + DP+ RQ Sbjct: 28 WQLKNR-IKSIQELEKVFSIDKKKKEIFQKVSPVFHFGTTPYYISLVKKPDYTDPVFRQI 86 Query: 61 IPQKEELNILPE--EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 P EE++ + DP + SP++GI HRYPDR+L ++ C VYCR C R+ Sbjct: 87 FPSFEEIDPDIQNNGSNDPFNEER-SPVEGITHRYPDRVLFRVTTFCSVYCRHCMRKRNF 145 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 S KD + + YI++ I EV+ +GGDPL L +K+L +L L+ IKHV I+ Sbjct: 146 I-YGERAKSKKDIDIMIEYIRKNRSIREVLISGGDPLTLPNKKLDYILGRLQGIKHVDII 204 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R SR P+V+P R E + L E ++I H NHP E ++E A+ + + G +L Sbjct: 205 RIGSREPVVNPFRFYDENLLELFERYDKLWIVTHFNHPNEITQETKKAVKNILSTGTPVL 264 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKGINDD I+ LMR+ + ++IKPYYL D G HFR I++G +I+ L+ Sbjct: 265 NQTVLLKGINDDKYIIEELMRSLLRVKIKPYYLFFCDPTKGVLHFRTDIKKGIEIMEYLR 324 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 ++SGL P Y +DLP G GKV + I ++ + S ++ + Sbjct: 325 GRLSGLGIPTYAVDLPEGKGKVPLLPEYIVEINDKSTVFRNYEGEI 370 >gi|148264204|ref|YP_001230910.1| lysine 2,3-aminomutase YodO family protein [Geobacter uraniireducens Rf4] gi|146397704|gb|ABQ26337.1| L-lysine 2,3-aminomutase [Geobacter uraniireducens Rf4] Length = 347 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 138/348 (39%), Positives = 207/348 (59%), Gaps = 9/348 (2%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + ++TS + L I E + + Y + +TP NLIN P DP+ RQ Sbjct: 4 WQNILAASITSPEQLARRFGIDAE---PLLRVVQRYPMRITPYYLNLINE--PGDPLWRQ 58 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P EL ++EDP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG Sbjct: 59 CVPDARELEDDL-QQEDPLREEILSPVPGLIHRYPDRVVWLVSSTCAVYCRFCMRKRQVG 117 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 G V AAL YI + +I +VI +GGDPL+L L+++L LR I H++I+R Sbjct: 118 C-VGAVTGKVQISAALDYIASRPEIRDVILSGGDPLLLDDDALEEILARLRQIPHLEIIR 176 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 SRVP+ P+RI L + LK P+YI H NHP E + E+ A +RLA+AGI L + Sbjct: 177 IGSRVPVTLPERITTRLCRMLKRY-HPLYINTHFNHPLEITAESATACARLADAGIPLGN 235 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLKG+ND+P ++ LM+ +++R+KPYY+H DL GT HFR +E+G +I+ SL+ Sbjct: 236 QTVLLKGVNDNPGVMKRLMQLLLKIRVKPYYIHQMDLVKGTGHFRTRVEQGLEIMESLRG 295 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG+ P+Y++DL GG GKV + +K+VG + ++ + +Y Sbjct: 296 HTSGMASPYYVIDLEGGKGKVPLLPDYVKRVGGNVLLVRNYRGEMVEY 343 >gi|298292101|ref|YP_003694040.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM 506] gi|296928612|gb|ADH89421.1| lysine 2,3-aminomutase YodO family protein [Starkeya novella DSM 506] Length = 385 Score = 424 bits (1091), Expect = e-117, Method: Composition-based stats. Identities = 178/342 (52%), Positives = 241/342 (70%), Gaps = 3/342 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL +L A+L+ + + ++ Y++A+TP +A LI+P +P DPIARQF+P Sbjct: 16 RTLRRLDELVEASLVAPD--PRLDAVAARYAVAVTPTLAGLIDPADPADPIARQFVPDAR 73 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E+ LPEE EDPIGD HSP+ GIVHRYPDR+LLKL+ VC VYCRFCFRREMVG T Sbjct: 74 EIETLPEELEDPIGDEAHSPVAGIVHRYPDRVLLKLVGVCAVYCRFCFRREMVGPGAETS 133 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS + EAALAY+ ++WEV+ TGGDPL+ + +RL +++ L I HV+I+RFH+RVP Sbjct: 134 LSEEALEAALAYVAAHPEVWEVVVTGGDPLVAAPRRLADLMRRLAAIDHVKIVRFHTRVP 193 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 I P+R+ P L+ L+ AG Y A+HANH E EA AA++RLA+AGI L+ QSVLL Sbjct: 194 IASPERVTPALVDSLRAAGLTTYAAVHANHARELGPEARAALARLADAGIALVGQSVLLA 253 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDD + L+ L R VE R+KPYYLHHPDLA GT+HFRLTIE GQ+++ +L+ ++SGL Sbjct: 254 GVNDDADTLSALFRALVENRVKPYYLHHPDLAPGTAHFRLTIERGQELMRALRGRVSGLA 313 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LD+PGG+GKV + ++ G + +TD+ VH Y Sbjct: 314 IPTYVLDIPGGFGKVPVGPGYLEPTPEG-WRVTDYCGGVHAY 354 >gi|325290800|ref|YP_004266981.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271] gi|324966201|gb|ADY56980.1| glutamate 2,3-aminomutase [Syntrophobotulus glycolicus DSM 8271] Length = 416 Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats. Identities = 123/347 (35%), Positives = 191/347 (55%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+H+ +T + L + Q EI ++ Y A++P +L + NP DP+ Q Sbjct: 71 WQLKHR-ITDVETLDGIVGLSAVQKKEISKVGRVYRWAISPYYLSLADFSNPLDPVLMQG 129 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL E EDP+ + SP I RYPDR+++ + ++C +YCR C RR +G Sbjct: 130 LPTGMELEDDKGE-EDPMAEALTSPAPCITRRYPDRLIINVTNMCGMYCRHCQRRRNIG- 187 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + +D AALAY++E +I +V+ TGGD L+LS + L +L L I HV+I R Sbjct: 188 EIDSHKNRQDLSAALAYVRENPEIRDVLITGGDALLLSDETLDWLLNELHQIPHVEIKRL 247 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ P RI L+ L + P+Y+ NHP E + EA A+ RL +AG+IL +Q Sbjct: 248 GTRVPVTLPARITDHLVNILAKYP-PLYLNTQFNHPIEVTLEAKQAVDRLISAGVILGNQ 306 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKGIN+ P I+ L + +++R++PYY+ H GT HF +I+EG ++ L+ Sbjct: 307 AVLLKGINNHPNIMKKLNQELLKIRVRPYYIFHAKNIKGTKHFIPSIQEGLAVMEHLRGY 366 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P YI++ P G GK+ + + + V Y Sbjct: 367 TSGLAVPTYIINAPKGGGKIPLLPQYLLSLNENKAVFRSWEGNVVHY 413 >gi|317154407|ref|YP_004122455.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio aespoeensis Aspo-2] gi|316944658|gb|ADU63709.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio aespoeensis Aspo-2] Length = 416 Score = 423 bits (1089), Expect = e-116, Method: Composition-based stats. Identities = 118/352 (33%), Positives = 184/352 (52%), Gaps = 11/352 (3%) Query: 1 MQLRHKTLTS--AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q+ ++ L + + + + +A+TP + + R Sbjct: 61 WQIDNRILDVDMVEKILGYS------RAGSMPLGKGLPMAVTPYYLGVAAVAGSAS-LRR 113 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 P E + E EDP+G+ H + GIVHRYPDR+L C YCR+C R +V Sbjct: 114 CIEPTIHEFVMDQSEAEDPLGEEGHMVVPGIVHRYPDRVLFLATDYCSTYCRYCTRSRLV 173 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G + K ++A+AYI+ I +V+ +GGDPL L RL +L LR I HV+I+ Sbjct: 174 GRNGRKHDTKK-WKSAIAYIRNTPAIRDVLLSGGDPLTLPDDRLDWLLTELRAIPHVEII 232 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R ++VP V PQRI PEL L++ P++I++H HP E + E + A + LA+AGI L Sbjct: 233 RIGTKVPAVLPQRITPELTAMLRKH-HPLFISLHFAHPDELTAETVRACTMLADAGIPLG 291 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 SQ+VLLKG+NDD + LM+ ++ R++PYYL+ D G++HFR +E+G +I+ L+ Sbjct: 292 SQTVLLKGVNDDTNTMKRLMQGLLKARVRPYYLYQCDPIPGSAHFRTRVEKGLEIIQGLR 351 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SG P Y++D PGG GK+ + + ++ ++ YP Sbjct: 352 GHTSGYAVPSYVIDAPGGGGKIPLLPEYYVGRDERGVILRNYEGNIYTYPDP 403 >gi|228994304|ref|ZP_04154195.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442] gi|228765454|gb|EEM14117.1| Arginine aminomutase [Bacillus pseudomycoides DSM 12442] Length = 367 Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats. Identities = 120/350 (34%), Positives = 191/350 (54%), Gaps = 7/350 (2%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q R++ + ++L + E+ IK Y A+TP A+L++ +P+ PI +Q I Sbjct: 13 QFRNR-IQKIEELKQYINVTPEEEQAIKRCEGIYRWAVTPYYASLMDKDDPSCPIRKQAI 71 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E I DP+GD + IVH+YPDRI++ + CPVYCR C R+ Sbjct: 72 PSSGEFMINEYSDVDPVGDTKYRVTNRIVHKYPDRIIMLITDQCPVYCRHCTRKYHTTDL 131 Query: 122 KGTVLSSKDTEA---ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 GT + E YI+ +I +V+ TGGDPL S +RL+ +LK LR I HV+I+ Sbjct: 132 DGTYFERSEAEGYEIDFEYIENHPEIRDVLLTGGDPLTYSDRRLESILKRLRSIPHVEII 191 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 RF SR P++ PQRI E + L++ P+++ H NHP E ++E+ A++ L G+ + Sbjct: 192 RFGSRYPVLLPQRITKEFCEMLEKY-HPIWLNTHFNHPKEVTKESAHAVNLLLKHGVPVQ 250 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +QSVLLKGINDD + + L++ +++R++PYYL+H D G SHF ++E+G +I+ L Sbjct: 251 NQSVLLKGINDDLDTMKQLVQALLKIRVRPYYLYHCDNVTGVSHFMTSLEKGVEIMRGLV 310 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 +G P YI+ GK+ I + + + + + + P Sbjct: 311 GHTTGFATPNYIITTIN--GKIPIPLETVLEHSDEGLILKSYEDKETVIP 358 >gi|225181359|ref|ZP_03734803.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter alkaliphilus AHT 1] gi|225167940|gb|EEG76747.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter alkaliphilus AHT 1] Length = 416 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 120/347 (34%), Positives = 193/347 (55%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R + + +DL + +E+ E++++ A TP +L+NP +PN P+ RQ Sbjct: 70 WQVRSR-INKVEDLIELLELNEEEAAEVRKVGEKNRWATTPYYLSLMNPDDPNCPVRRQA 128 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EEL P ++DP+G+ SP I RYPDR+++ + + C +YCR C RR +G Sbjct: 129 IPATEELLN-PVGKDDPMGEQYTSPAPAITRRYPDRLIINVTNQCGMYCRHCQRRRNIG- 186 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + +D +AAL Y++ +I +V+ TGGD L+L+ + + +L L I HV+I R Sbjct: 187 EVDRMTAREDLQAALDYVRNHPEIRDVLLTGGDALMLNEEIIDWLLTELDNIPHVEIKRL 246 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR + P R+ EL L++ PVYI H N+P E + A +L AG+ L +Q Sbjct: 247 GSRTLVTMPMRVTDELCAVLEKHS-PVYINTHFNNPAEVTPAVAEATRKLTRAGVSLGNQ 305 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL G+NDDP ++ L +++ I+PYY+ H GT+HFR +E G +I+ L+ + Sbjct: 306 AVLLAGVNDDPHVMKKLNHMLLQVMIRPYYIFHAKAVTGTAHFRTRVEVGIEIMEHLRGQ 365 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG+ P +I++ P GYGK + + G I N V +Y Sbjct: 366 TSGMAIPTFIVNAPEGYGKTPMLPEYLISSGRDKIFIRTWENRVFEY 412 >gi|148255402|ref|YP_001239987.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1] gi|146407575|gb|ABQ36081.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1] Length = 364 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 179/358 (50%), Positives = 238/358 (66%), Gaps = 10/358 (2%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R TL SA DL L ++ ++ Y++A+T +A+LI+ +P+DPIARQF+P Sbjct: 6 RPTTLRSAADLVAQGLAAPSDEATLERVAQRYAVAVTTHLADLIDADDPDDPIARQFVPS 65 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 +EL P ER DPIGD+ H+P+ GIVHRYPDR+LLKL+HVC VYCRFCFRREMVG K Sbjct: 66 ADELKAHPGERGDPIGDDAHAPVPGIVHRYPDRVLLKLVHVCAVYCRFCFRREMVGPGKD 125 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 LS + AALAYI+ +IWEVI TGGDPL+LS +RL++++ L I HV+I+R H+R Sbjct: 126 NALSEEAYRAALAYIRSHGEIWEVILTGGDPLMLSPRRLKEIMADLAAIDHVRIIRIHTR 185 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 +P+ DPQRI L+ LK G ++A+HANHP E + +A +RL +AGI L+SQSVL Sbjct: 186 LPVADPQRITAALVDALKVQGAATWVALHANHPRELNAAVRSACARLIDAGIPLVSQSVL 245 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+NDD L LMR FVE RIKPYYLHH DLA GT+H R T+E GQ ++ +L+ ++SG Sbjct: 246 LRGVNDDVATLEALMRAFVETRIKPYYLHHGDLAPGTAHLRTTLEHGQSLLRALRGRVSG 305 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVG----------NGSYCITDHHNIVHDYPPKS 351 LCQP Y+LD+PGGYGK + + Y + D+ H YPP + Sbjct: 306 LCQPDYVLDIPGGYGKAPVGPQYLTAEDFVEQDHAAGTQTRYRVIDYCGEAHLYPPAA 363 >gi|195952479|ref|YP_002120769.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp. Y04AAS1] gi|195932091|gb|ACG56791.1| lysine 2,3-aminomutase YodO family protein [Hydrogenobaculum sp. Y04AAS1] Length = 365 Score = 421 bits (1084), Expect = e-116, Method: Composition-based stats. Identities = 121/343 (35%), Positives = 194/343 (56%), Gaps = 5/343 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLI-NPHNPNDPIARQ 59 QL+++ +T+ ++L + E+I ++ Y A+TP +L+ NP + DPI Q Sbjct: 15 WQLQNR-ITTLEELSKYIELTNEEIKFFDAVAEEYPFAVTPYYLSLVKNPKDKKDPIRLQ 73 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E++ ++ P N + +KG+ HRY DR L+ + C VYCR C R+ + Sbjct: 74 IVPSPLEIDENAQQNSHPNALNEETFIKGLTHRYEDRALISVTSYCGVYCRHCMRKRIF- 132 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + + YI+ I +V+ +GGDPL L ++RL+ +L L I+H++++R Sbjct: 133 KEGTHAAPKELLDVYFDYIKNHKTIKDVLISGGDPLTLDNERLKYILNNLSSIEHLEVIR 192 Query: 180 FHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 SRVP+ PQR+ + EL+ L K ++I H NHP E +E+A AI L AG+ + Sbjct: 193 IGSRVPVTLPQRLYDEELLDILSRYDK-LWINTHFNHPNEITEDAKVAIRNLLKAGVPVN 251 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKG+NDD E + LMR + +++KP YL H D GT HFR +IE+G +I+ ++ Sbjct: 252 NQAVLLKGVNDDKETMLELMRKLLSIKVKPQYLFHCDPITGTIHFRTSIEKGLEIMDYMR 311 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 ++SG P Y +DLPGG GKV + KK+ +G Y Sbjct: 312 GRLSGFGIPTYAIDLPGGKGKVPLIPSYFKKLEDGLYEFIAFD 354 >gi|197106130|ref|YP_002131507.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1] gi|196479550|gb|ACG79078.1| L-lysine 2,3-aminomutase [Phenylobacterium zucineum HLK1] Length = 341 Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 170/347 (48%), Positives = 233/347 (67%), Gaps = 10/347 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64 + L + +DL A L ++ + ++ Y++A+TP +A L +ARQF+P Sbjct: 3 RPLRTPEDLIAAGLAPAAALEGLARVAERYAVAITPDMAGLSET----CEGVARQFVPTA 58 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 EL PEER DPIGD HSP++GIVHRYPDR+LLK H C VYCRFCFRREMVG + Sbjct: 59 AELVQTPEERADPIGDEAHSPVEGIVHRYPDRVLLKANHACAVYCRFCFRREMVGPEGVR 118 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 LS +AA+AY+ + +IWEVI TGGDPLILS +RL + L I HV+++RFH+RV Sbjct: 119 PLSPAALDAAMAYVAARPEIWEVIVTGGDPLILSPRRLADIGARLAGIPHVKVVRFHTRV 178 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P VDP ++ +++ LK +GK V++A+HANHP E + A+AA +R+ +AGI ++SQ+VLL Sbjct: 179 PAVDPGKVTAGVVEALKASGKTVWVALHANHPDELTPAALAACARIVDAGIPMVSQTVLL 238 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 KGINDDP++L LMR FVE RIKPYYLHH DLA GT HFR T+ EGQ ++ +L+ ++SGL Sbjct: 239 KGINDDPDVLDALMRRFVETRIKPYYLHHGDLAPGTGHFRATLAEGQDLMRALRGRLSGL 298 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKS 351 QP Y+LD+PGG+GK + + + D H YPP++ Sbjct: 299 AQPTYVLDIPGGHGKAPVGPAYVHGGE-----VEDPQGRRHAYPPEA 340 >gi|323701829|ref|ZP_08113499.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum nigrificans DSM 574] gi|323533133|gb|EGB23002.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum nigrificans DSM 574] Length = 422 Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 121/348 (34%), Positives = 187/348 (53%), Gaps = 4/348 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ + Q L + E ++ I ++ HY A++P L+ PI +Q Sbjct: 74 WQMANR-IKDVQVLGQLMNLSAEDMNLIDQVGQHYRWAVSPYYLALVIISGLTGPIGKQA 132 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +E+ EDP+G+ SP I RYPDR+++ + + C +YCR C RR +G Sbjct: 133 IPSIKEIEDHSG-VEDPMGEEFTSPAPAITRRYPDRLIINVTNQCAMYCRHCQRRRNIG- 190 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + K +AAL YI+E +I +V+ TGGD L+L K++ +L L I HV+I R Sbjct: 191 EVDVHKPRKVLQAALDYIRENEEIRDVLITGGDALLLPDKQIDWLLTELDRIPHVEIKRI 250 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQRI P L L++ P+YI NHP E + EA A RL AG++L +Q Sbjct: 251 GTRTPVTMPQRITPTLCAILEKHP-PIYINTQFNHPLEVTPEAKTACDRLVKAGVVLGNQ 309 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLK IN+ P+++ L ++ +++R++PYY+ H GT HF ++EEG I+ L+ Sbjct: 310 AVLLKDINNHPDVMKRLNQSLLQIRVRPYYIFHAKNVKGTGHFITSVEEGIAIMDQLRGY 369 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SGL P YI++ P GYGK I + + + V YP Sbjct: 370 TSGLAVPTYIINAPNGYGKTPILPQYVLDRKDNYITLRTWEKRVIRYP 417 >gi|114797088|ref|YP_761814.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444] gi|114737262|gb|ABI75387.1| putative L-lysine 2,3-aminomutase [Hyphomonas neptunium ATCC 15444] Length = 349 Score = 420 bits (1081), Expect = e-115, Method: Composition-based stats. Identities = 165/347 (47%), Positives = 236/347 (68%), Gaps = 2/347 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 ++ T A +L A +I +Q+ + ++ +Y IAL +A LI+ +P DPI Q++P Sbjct: 1 MKPVTYRHAGELLTAGIISADQLPVVSRVAENYVIALPARLATLIDRDDPLDPIGLQYVP 60 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 EELN P E +DPIGD HSP+ GIVHRYPDR+LLK+ CPVYCRFCFRRE VG +K Sbjct: 61 SGEELNAQPGEMDDPIGDAAHSPIPGIVHRYPDRVLLKITSTCPVYCRFCFRRERVGPEK 120 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G LS + +AA AYI ++ +I+EVI TGGDP+ILS R + + L I HV+++R+HS Sbjct: 121 GDALSKAEIDAACAYIADRPEIFEVILTGGDPMILSPARAGALTRRLEAIDHVKVIRWHS 180 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 RVP+ P+R+ PE + ++ + K V++A+HANH EF+ EA+AAI RL+ AGI L+SQSV Sbjct: 181 RVPVAAPERVTPEFTEAIRSSEKAVFVAVHANHAREFTPEAVAAIRRLSQAGISLVSQSV 240 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LL+G+ND E LA+LMR F+ + IKPYYLH D A GTSHFR+ +EEGQ +V L++++S Sbjct: 241 LLRGVNDTFEALADLMRAFLSVGIKPYYLHQLDAAPGTSHFRVPVEEGQALVRRLRDELS 300 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349 GL P Y+ D+PGG K ++ +I++ + ++ + + PP Sbjct: 301 GLATPTYVADIPGGVSKAVMNLPDIERR-DDAFVLRGRDGETYL-PP 345 >gi|91976978|ref|YP_569637.1| hypothetical protein RPD_2506 [Rhodopseudomonas palustris BisB5] gi|91683434|gb|ABE39736.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB5] Length = 363 Score = 419 bits (1079), Expect = e-115, Method: Composition-based stats. Identities = 183/350 (52%), Positives = 249/350 (71%), Gaps = 4/350 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L L + D++++++ Y+IA+TP IA LI+P +P+DPIARQ+IP+ EE Sbjct: 14 TLRQPAELIAQGLAPADAQDDLEQVAQRYAIAVTPDIAALIDPDDPDDPIARQYIPRAEE 73 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L LP ER+DPIGD HSP++GIVHR+ DR+LLKL+HVC VYCRFCFRREMVG K L Sbjct: 74 LATLPIERDDPIGDGAHSPVEGIVHRHRDRVLLKLVHVCAVYCRFCFRREMVGPGKDNSL 133 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S T AAL YI+ +IWEVI TGGDPL+LS +RL ++ L I HV+I+RFH+R+P+ Sbjct: 134 SGDATAAALGYIRAHPEIWEVILTGGDPLMLSPRRLADIMAELATIDHVRIIRFHTRLPV 193 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 +P RI+ EL++ L+ GK V++A+HANHP E + A AA +R+ +AGI ++SQSVLL G Sbjct: 194 AEPARISAELVRALRVEGKTVWMALHANHPRELTTAARAACARIIDAGIPMVSQSVLLAG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMR FVE RIKPYYLHH DLA GT+H R ++ EGQ ++ +L+ ++SGLCQ Sbjct: 254 VNDDAATLEALMRVFVECRIKPYYLHHGDLAPGTAHLRTSLAEGQALMRALRGRVSGLCQ 313 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVG----NGSYCITDHHNIVHDYPPKSS 352 P Y+LD+PGGYGK + + + + Y ++D+ VH YPPK + Sbjct: 314 PEYVLDIPGGYGKAPVGPNYLAADDGTAADSRYRVSDYCGDVHLYPPKPA 363 >gi|296448496|ref|ZP_06890376.1| lysine 2,3-aminomutase YodO family protein [Methylosinus trichosporium OB3b] gi|296253995|gb|EFH01142.1| lysine 2,3-aminomutase YodO family protein [Methylosinus trichosporium OB3b] Length = 376 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 172/346 (49%), Positives = 229/346 (66%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL S DL A L+ E ++ + YS+A+T A L++ +P DPIARQF+P E Sbjct: 22 TLKSVADLVAAGLVAPEAAPALRAVEARYSVAVTAETAALLDRADPRDPIARQFLPDARE 81 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ LPEE DPIGD+ SP++G+VHRY DR+LLKLL VCP+YCRFCFRRE VG KG L Sbjct: 82 LDTLPEELADPIGDDAFSPVEGLVHRYSDRVLLKLLSVCPIYCRFCFRRESVGLGKGGSL 141 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S AL YI E+ +I+EVI TGGDPL LS +RL + + LR I HV +LR H+R P Sbjct: 142 SETALTRALDYIAERPRIFEVILTGGDPLALSARRLGLLAERLREIAHVAVLRIHTRAPT 201 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P + PE + L +GK VY+A+H NH E + A AI+R+ AG+ L+Q+VLL+G Sbjct: 202 VSPDLVTPERLAALTASGKAVYMALHVNHARELTPRAREAIARIQAAGVATLAQTVLLRG 261 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD + L LMR LR+KPYYLHHPDLA GT+HFRL+IEEG+ + L +ISG+ Sbjct: 262 VNDDADTLETLMRALTALRVKPYYLHHPDLAPGTAHFRLSIEEGRALHGELARRISGIAL 321 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P Y+LD+PGGYGKV + + +I++ G + + D H YP + + Sbjct: 322 PAYVLDIPGGYGKVPLQSPHIERNPAGDWLVRDRAGRAHAYPGEGA 367 >gi|94266932|ref|ZP_01290585.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] gi|93452384|gb|EAT03003.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] Length = 365 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 128/344 (37%), Positives = 181/344 (52%), Gaps = 8/344 (2%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +LTS +L + E ++ + + Y + + P +LI P DP+ RQ IP E Sbjct: 22 SLTSPDELAACFDLDPE---PLRAVCHRYPLRINPYYLSLI--EQPGDPLWRQAIPDPRE 76 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L ED + + SP+ +VH+YPDR LL C +YCRFC R+ VG + Sbjct: 77 LTDS-HCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGG 135 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + +AAL Y+ I +V+ +GGDPL+L+ L +L LR I ++I+R SRVP Sbjct: 136 RHR-LQAALDYLAATPAIHDVLLSGGDPLLLTDDELLWLLAELRKIPQLEIIRMGSRVPC 194 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 PQR+ L LK P+Y+ H NHP E + EA A RLA AGI L +Q+VLLKG Sbjct: 195 TLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQTVLLKG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD + LMR + +R+KPYYL DL+ GT HFR +E+G I+ L SGL Sbjct: 254 VNDDAATIKELMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLAT 313 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 P LD PGG GK+ + + + G + + +YP Sbjct: 314 PTLALDAPGGMGKIPLTPDYHQVLKAGKLTFSSYTGQPGEYPNP 357 >gi|297617606|ref|YP_003702765.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus lipocalidus DSM 12680] gi|297145443|gb|ADI02200.1| lysine 2,3-aminomutase YodO family protein [Syntrophothermus lipocalidus DSM 12680] Length = 417 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 115/346 (33%), Positives = 187/346 (54%), Gaps = 5/346 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 +R++ + L I + I ++ Y A++P +L+ N+P+ Q Sbjct: 71 WHMRNR-INDVSVLTKILDISTFESRGITKVGRTYRWAVSPYYLSLVGDDYLNNPVYLQA 129 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL LP+ DP+ + SP I RYPDR+++ + + C ++CR C RR +G Sbjct: 130 VPDPREL--LPKGELDPMDEAGTSPAPRITRRYPDRLIINVTNQCAMFCRHCQRRRNIG- 186 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + S +D AAL YI +I +V+ TGGD L+LS + L +L L I HV+I R Sbjct: 187 EIDQHASREDVRAALHYISGNPEIRDVLITGGDALLLSDRTLDWILTELDRIPHVEIKRI 246 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R+P+ PQR+ PEL + + + P+Y+ NHP E + EA A L AG +L +Q Sbjct: 247 GTRIPVTLPQRVTPELCEVISKHP-PIYVNTQFNHPLEVTPEAKQACDMLVQAGAVLGNQ 305 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL+GIND P ++ L + +R++PYY+ HP GTSH ++IE+G +I+ +L+ Sbjct: 306 AVLLRGINDCPVVMKKLNHELLRIRVRPYYIFHPKAVRGTSHRWVSIEKGLEIMEALRGH 365 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 SGL P YI++ PGG+GK+ + + K+ + + + Sbjct: 366 TSGLAVPTYIINAPGGFGKIPLMPQYLLKLEPDKAVVRTWEGRIVE 411 >gi|302386645|ref|YP_003822467.1| lysine 2,3-aminomutase YodO family protein [Clostridium saccharolyticum WM1] gi|302197273|gb|ADL04844.1| lysine 2,3-aminomutase YodO family protein [Clostridium saccharolyticum WM1] Length = 419 Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 191/347 (55%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL HK ++ L + + + IK++ Y A++P +L +PH+ DPI Sbjct: 64 WQLTHK-ISDINTLSEIIPLNETEKMRIKKVEKKYRWAVSPYYLSLADPHDNYDPIRLLS 122 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +EL P DP+G+ +P I RYPDR+++ + + C +YCR C RR +G Sbjct: 123 IPTHKELED-PCLDLDPMGEEYTNPAGCITRRYPDRLIINVTNECAMYCRHCQRRRNIG- 180 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 ++ S + ++ YI+E +I +V+ TGGD L LS + L+ ++K L+ I H+ +R Sbjct: 181 EEDVHRSREMILESIEYIRENEEIRDVLITGGDALCLSDEDLEWMIKQLKEISHIDYIRL 240 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R + PQRI +L L++ P+YI H NHP E ++ + AA +LA++GI+L +Q Sbjct: 241 GTRSLVTMPQRITDQLCSMLRKY-HPIYINTHFNHPIEITKASKAACEKLADSGIVLGNQ 299 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL GIN++ I+ L ++ R++PYY+ H GT+HF +IE+G +I+ L+ Sbjct: 300 AVLLNGINNNKYIMRVLNHELLKCRVRPYYIFHAKHVQGTAHFNTSIEDGIEIMEYLRGY 359 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SG+ P +I++ P G GK I + I G G + + Y Sbjct: 360 TSGMAIPTFIVNAPKGQGKTPIFPNYIVSRGPGYVQLRTWEGNMVKY 406 >gi|51246056|ref|YP_065940.1| hypothetical protein DP2204 [Desulfotalea psychrophila LSv54] gi|50877093|emb|CAG36933.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54] Length = 353 Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats. Identities = 123/345 (35%), Positives = 190/345 (55%), Gaps = 7/345 (2%) Query: 7 TLTSAQDLYNANLIKKEQIDEI-KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 ++TS L+ + + I ++ + + + +LI DPI +Q IP Sbjct: 11 SITSPSQLHLFKKKHQNLNETISNKVIPDFPMRINSYFLSLI--EEVGDPIWKQCIPDPR 68 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E EDP+G+ SP+ +VH+YPDR LL + + C VYCRFC R+ MVG+++ Sbjct: 69 EEEDFIC-MEDPLGEEALSPVPNLVHKYPDRALLLVTNQCAVYCRFCTRKRMVGTER-MH 126 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 ++ ++ +A Y++ I EV+ +GGDPL+L+ ++ +L L+ I + ++R SRVP Sbjct: 127 ITEENLQACYDYLRRTPAIREVLISGGDPLLLADDKIDHILSELQSIPSIDVIRIGSRVP 186 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 P RI PEL+ L++ P+YI H NHP E + EA A + LA+ GI L Q+VLLK Sbjct: 187 CTLPMRITPELVAILRKY-HPLYINTHFNHPRELTPEAKKACALLADGGIPLGCQTVLLK 245 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ + L L +++R+KPYYL DL GT+HFR T + G I+ L ISG+ Sbjct: 246 GVNDNAQTLKELFLGLLKMRVKPYYLFQADLTRGTNHFRTTTKTGIDIMRQLYGHISGMA 305 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 P LD PGG GK+ + + IK+ G ++ + YP Sbjct: 306 IPRLALDAPGGKGKIPLSPNYIKESGEN-LIFENYLGEICSYPEA 349 >gi|153004183|ref|YP_001378508.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. Fw109-5] gi|152027756|gb|ABS25524.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. Fw109-5] Length = 385 Score = 418 bits (1076), Expect = e-115, Method: Composition-based stats. Identities = 122/350 (34%), Positives = 190/350 (54%), Gaps = 3/350 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q R+ L +A++L + +E+ + + +A+TP A+L++P +P+ PI Q Sbjct: 20 WQHRN-ALRTAEELGRVVWLGEEERRGLAQALGRTRVAVTPYYASLMDPRHPSCPIRLQA 78 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP E P + DPIG+ H P + IVH+Y DR+L + C VYCR C RR + Sbjct: 79 IPSAREAEEAPGDLRDPIGEEAHRPARAIVHKYRDRVLFLAVDRCSVYCRHCTRRRITFG 138 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 G E +AY++ ++ +VI +GGDPL+LS +RL +L LR I HVQ+LR Sbjct: 139 ADGG-FDRDAIEEGIAYVRAHREVRDVIVSGGDPLVLSDERLDALLGGLRAIPHVQLLRV 197 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ P R+ P L L+ P+++ H NHP E + +A AA L + G+ + +Q Sbjct: 198 ATRAPVTCPMRVTPALAALLRRHA-PLFVVTHFNHPAECTPDARAACEALVDHGVPVENQ 256 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+N +L +L + R++PYYLH DLA GT+H R +E G I+ +++ + Sbjct: 257 SVLLRGVNSSARLLTDLNERLLTFRVRPYYLHQGDLAEGTAHLRTPLEAGVAILEAMRGR 316 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 SGL P +DLP G GK+ + G++ + H + YP Sbjct: 317 TSGLAIPHLAVDLPDGGGKITLQPSYQLGREGGAHALRSHRGGRYLYPDP 366 >gi|115380257|ref|ZP_01467275.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1] gi|115362736|gb|EAU61953.1| L-lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1] Length = 378 Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats. Identities = 116/334 (34%), Positives = 182/334 (54%), Gaps = 3/334 (0%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH + S L + ++ ++E + + + ++P +LI+P +P P+ Q Sbjct: 47 WQQRH-AVRSLAQLERYVPLTPQERAGVQETAALFRVGISPYYLSLIDPEHPFCPVRMQS 105 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP +EE I P E DP+G++ P + IVH+YPDR+L L C VYCR C RR + Sbjct: 106 IPVQEEARIRPGELADPLGEDKTRPEEAIVHKYPDRVLFLALDTCSVYCRHCTRRRITKG 165 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 LS +AYI+ ++ +V+ +GGDP ILS RL+++L L I HV+++R Sbjct: 166 -GEAELSKDQMRRGIAYIRNHPEVRDVLISGGDPFILSDGRLEELLSALHDIPHVEMIRI 224 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ P R+ L L+ PVY+ H NHP E + EA A RL + G+ + +Q Sbjct: 225 GTRVPVCLPMRVTDALALTLRRYA-PVYVVTHFNHPKEVTPEASEACQRLVDHGVPVENQ 283 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VL++ +N D I+ L + +R++PYYLH D+A G H R I +G +I+ ++ Sbjct: 284 AVLMRRLNSDARIIQELSHVLLRIRVRPYYLHQMDVAQGCEHLRTPISKGLEILQQMRGH 343 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334 +GL P +DLPGG GKV + + + G Sbjct: 344 TTGLAVPHLAVDLPGGGGKVTLQPDYVVERGEHE 377 >gi|256378515|ref|YP_003102175.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM 43827] gi|255922818|gb|ACU38329.1| lysine 2,3-aminomutase YodO family protein [Actinosynnema mirum DSM 43827] Length = 381 Score = 417 bits (1074), Expect = e-114, Method: Composition-based stats. Identities = 118/345 (34%), Positives = 191/345 (55%), Gaps = 8/345 (2%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 +RH+ +T+ L + ++ I + Y ++TP A+L++P +P PI +Q Sbjct: 25 WHMRHR-VTTLDKLREWVRVSPQEEAAISGTAGKYRWSVTPYYASLMDPDDPLCPIRQQA 83 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P + EL P+ DP+GD + +VH+YPDR++L + CPVYCR C R+ Sbjct: 84 VPAQGELLEFPDAEVDPVGDMFYRKTNRVVHKYPDRVVLLVTETCPVYCRHCTRKFHTTD 143 Query: 121 QKGTVLSSKD---TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 +GT + E L YI+E +I +V+ TGGDPL ++L++++ LR I V+I Sbjct: 144 VEGTYFRDNEGGGYEEDLRYIREHPEIRDVLLTGGDPLSYRDEKLEEIISGLRAIPSVEI 203 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR P++ PQR+ E + L PV++ H NHP E + EA AA+ RL G+ + Sbjct: 204 IRIGSRFPVLLPQRVTDEFCEMLARH-HPVWLNTHFNHPREITPEAAAAVDRLLRHGVPV 262 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLLKGINDD + LM + +R++PYYL+H D G SHF ++E+G +I+ L Sbjct: 263 GNQTVLLKGINDDVPTMRKLMTELLRIRVRPYYLYHCDNVTGVSHFMTSVEKGLEIMEGL 322 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342 + ++G P Y+L GK+ I + V +G + ++ Sbjct: 323 QGHMTGFGVPQYVLTT--RIGKIPISRPYHEAVEDG-LALRNYRG 364 >gi|94270918|ref|ZP_01291853.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] gi|93450620|gb|EAT01735.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] Length = 365 Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats. Identities = 129/344 (37%), Positives = 180/344 (52%), Gaps = 8/344 (2%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +LTS +L + E ++ + Y + + P +LI P DP+ RQ IP E Sbjct: 22 SLTSPDELAARFDLDPE---PLRAVCRRYPLRINPYYLSLIKQ--PGDPLWRQAIPDPRE 76 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L ED + + SP+ +VH+YPDR LL C +YCRFC R+ VG + Sbjct: 77 LTDS-HCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGG 135 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + +AAL Y+ I +V+ +GGDPL+L+ L +L LR I H++I+R SRVP Sbjct: 136 RHR-LQAALDYLAATPAIHDVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMGSRVPC 194 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 PQR+ L LK P+Y+ H NHP E + EA A RLA AGI L +Q+VLLKG Sbjct: 195 TLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAAGIPLGNQTVLLKG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD + LMR + +R+KPYYL DL+ GT HFR +E+G I+ L SGL Sbjct: 254 VNDDAATIKGLMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLAT 313 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 P LD PGG GK+ + + + G + +YP Sbjct: 314 PTLALDAPGGMGKIPLTPDYHQVLKAGKLTFHSYTGQPGEYPNP 357 >gi|94263390|ref|ZP_01287204.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] gi|93456226|gb|EAT06360.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] Length = 365 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 128/344 (37%), Positives = 179/344 (52%), Gaps = 8/344 (2%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +LTS +L + E ++ + Y + + P +LI P DP+ RQ IP E Sbjct: 22 SLTSPDELAARFDLDPE---PLRAVCRRYPLRINPYYLSLIKQ--PGDPLWRQAIPDPRE 76 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L ED + + SP+ +VH+YPDR LL C +YCRFC R+ VG + Sbjct: 77 LTDS-HCPEDSLHEEALSPVPNLVHKYPDRALLLTTGQCAMYCRFCTRKRKVGGGRIVGG 135 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + +AAL Y+ I +V+ +GGDPL+L+ L +L LR I H++I+R SRVP Sbjct: 136 RHR-LQAALDYLAATPAIHDVLLSGGDPLLLADNELLWLLTELRKIPHLEIIRMGSRVPC 194 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 PQR+ L LK P+Y+ H NHP E + EA A RLA GI L +Q+VLLKG Sbjct: 195 TLPQRVTTRLAGILKRF-HPLYLNTHFNHPRELTAEAATACGRLAAGGIPLGNQTVLLKG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD + LMR + +R+KPYYL DL+ GT HFR +E+G I+ L SGL Sbjct: 254 VNDDAATIKELMRGLLRIRVKPYYLFQGDLSRGTDHFRTPVEQGLAIMRELIGHTSGLAT 313 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 P LD PGG GK+ + + + G + +YP Sbjct: 314 PTLALDAPGGMGKIPLTPDYHQVLKAGKLTFHSYTGQPGEYPNP 357 >gi|77920113|ref|YP_357928.1| hypothetical protein Pcar_2520 [Pelobacter carbinolicus DSM 2380] gi|77546196|gb|ABA89758.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380] Length = 347 Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats. Identities = 136/349 (38%), Positives = 203/349 (58%), Gaps = 10/349 (2%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + ++T+ L + E+ + Y + +TP +LI P D I RQ Sbjct: 4 WQRQLIDSVTAPAGLAERFGTD---MSELDAVVQRYPMRITPYYLDLIEK--PGDAIWRQ 58 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P + EL E+ DP+ + SP+ +VHRYPDR+LL C VYCRFC R+ VG Sbjct: 59 CVPDRRELLPCQED-ADPLAEERLSPVPLLVHRYPDRVLLLASGQCAVYCRFCTRKRKVG 117 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +S + + A+ Y+ Q+ +VI +GGDPL+L RL+ +L LR I HV+I+R Sbjct: 118 C-AAMGVSDRHLDEAIDYVARTEQVRDVILSGGDPLLLEDDRLEHLLMRLRAIPHVEIIR 176 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 SRVP+ PQRI EL L+ P+Y+ H NHP E + +A A RLA+AG+ L + Sbjct: 177 IGSRVPVTLPQRITEELCAMLRRY-HPLYLNTHFNHPRELTPQAFEACRRLADAGLPLGN 235 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+G+ND P ++ L++ +++R++PYYLHH DLAAGT HFR IE G IVA+L+ Sbjct: 236 QTVLLRGVNDTPAVMRQLVKGLLKMRVRPYYLHHMDLAAGTGHFRTRIETGLDIVAALRG 295 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 ISGL P Y++D PGG GK+ + + K+G+ + + + ++P Sbjct: 296 PISGLAVPHYVIDSPGGKGKIPLLPEYLVKLGDTAL-LRTPSGEMIEFP 343 >gi|302875509|ref|YP_003844142.1| lysine 2,3-aminomutase YodO family protein [Clostridium cellulovorans 743B] gi|307687963|ref|ZP_07630409.1| lysine 2,3-aminomutase YodO family protein [Clostridium cellulovorans 743B] gi|302578366|gb|ADL52378.1| lysine 2,3-aminomutase YodO family protein [Clostridium cellulovorans 743B] Length = 424 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 121/348 (34%), Positives = 189/348 (54%), Gaps = 6/348 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ ++ + L + +E+ + IK++ Y ++P A+LI+ N N P+ Q Sbjct: 67 WQISNR-ISDIKILSKIIKLSEEEAEHIKKVEQKYRWGISPYYASLIDESNSN-PVKLQC 124 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P ELN E DP+G+ SP I RYPDR+++ + ++C +CR C RR +G Sbjct: 125 VPTLFELND--EGTLDPMGEEYTSPAGTITRRYPDRLIINVTNMCASFCRHCQRRRNIGI 182 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 S D E ++ YI+ +I +V+ TGG+PL+LS + +L L IK ++ +R Sbjct: 183 -VDKHQSISDLEESIEYIRNNREIRDVLITGGEPLLLSDGMIDWLLGELFKIKTLEYVRI 241 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RV PQRI L+ LK+ P+YI NHP E + EA A +LAN GI L +Q Sbjct: 242 GTRVLATLPQRITANLLSILKKYS-PLYINTQFNHPLEITREAKEACDKLANIGIPLGNQ 300 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLL GIN+D ++ L + ++ RIKPYY+ H GT+HF +I++G +I+ L+ Sbjct: 301 TVLLNGINNDKYVMRLLNQELLKCRIKPYYIFHGKKIMGTTHFNTSIDDGIEIMEYLRGY 360 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 SG+ P YI++ P G GK I I G + I + DYP Sbjct: 361 TSGMAIPTYIINAPNGNGKTPILPQYIISRGKNNVKIRTWEGKIFDYP 408 >gi|152973019|ref|YP_001338165.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|150957868|gb|ABR79898.1| putative aminomutase [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] Length = 342 Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats. Identities = 107/324 (33%), Positives = 170/324 (52%), Gaps = 5/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + +TS +L + E++ +E + + + + NPNDP+ RQ Sbjct: 18 QLAN-VVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFIARMEKGNPNDPLLRQV 76 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 + +EE + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR + Sbjct: 77 LTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYA 135 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR Sbjct: 136 ENQG--TRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRI 193 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 HSR+PIV P RI L + + V + H NH E E AA++ L AG+ LL+Q Sbjct: 194 HSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAMLRQAGVTLLNQ 253 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E ++I+ L Sbjct: 254 SVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTL 313 Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324 ISG P ++ G K +D Sbjct: 314 ISGYMVPKLAREIGGEPSKTPLDL 337 >gi|197121712|ref|YP_002133663.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K] gi|196171561|gb|ACG72534.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter sp. K] Length = 402 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 122/353 (34%), Positives = 182/353 (51%), Gaps = 5/353 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH LT+A D + + + H +A TP A+L++ +P PI Q Sbjct: 20 WQQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQV 78 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S Sbjct: 79 MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ +P R+ L P+++ H NHP E + EA A RL + G+ + +Q Sbjct: 199 ATRAPVTNPMRVTDALAAA-LRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++ Sbjct: 258 SVLLRGVNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGH 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350 SGL P +DLPGG GKV + + G + + + + YP Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGEEGARGHWLRNGRGERYFYPEP 370 >gi|258516088|ref|YP_003192310.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum acetoxidans DSM 771] gi|257779793|gb|ACV63687.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum acetoxidans DSM 771] Length = 408 Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats. Identities = 123/344 (35%), Positives = 190/344 (55%), Gaps = 5/344 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ ++ + L Q+++IK++ Y A++P +L N N PI +QF Sbjct: 63 WQIKNR-FSNVEQLQKILNTCP-QLEDIKKVERVYRWAVSPYYLSLSAVDNVNCPIRKQF 120 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EL DP+ + N SP K +V RYPDR+++K+ + C +CR C R+ +G Sbjct: 121 IPSILELQDELG-LSDPVDEKNTSPTKAVVRRYPDRLIIKVTNQCASFCRHCQRKRTIGK 179 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 Q SS + E A+ YI++ +I +V+ TGGD L+LS K+L +L L I HV+I R Sbjct: 180 Q-DLHTSSGNIEKAVDYIKKNPEIRDVLITGGDALLLSDKKLDWLLTELDNINHVEIKRI 238 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +RVP+ P RI +L L P+YI NHP E + EA A ++L AG++L +Q Sbjct: 239 GTRVPVTLPMRITEKLCGILGNHP-PLYINTQFNHPLEVTPEAATACNKLIQAGVVLSNQ 297 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLK IND+P I+ L + +++R++PYYL H GT HF + G +I+ L+ Sbjct: 298 SVLLKEINDNPHIIKKLNQELLKIRVRPYYLFHAMPVKGTRHFSTKLSVGLEIMEKLRGY 357 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 SGL P YI+++ GG GKV I + + + N + Sbjct: 358 TSGLAIPSYIVNVNGGLGKVPIQPQYLFFNEHNEITLRTWENKL 401 >gi|288937552|ref|YP_003441611.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola At-22] gi|288892261|gb|ADC60579.1| lysine 2,3-aminomutase YodO family protein [Klebsiella variicola At-22] Length = 342 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 107/324 (33%), Positives = 171/324 (52%), Gaps = 5/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + +TS +L + E++ +E + + + + NPNDP+ RQ Sbjct: 18 QLAN-VVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFIARMEKGNPNDPLLRQV 76 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 + +EE + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR + Sbjct: 77 LTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYA 135 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR Sbjct: 136 ENQG--TRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRI 193 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 HSR+PIV P RI L + + V + H NH E +E AA++ L AG+ LL+Q Sbjct: 194 HSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAMLRQAGVTLLNQ 253 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E ++I+ L Sbjct: 254 SVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTL 313 Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324 ISG P ++ G K +D Sbjct: 314 ISGYMVPKLAREIGGEPSKTPLDL 337 >gi|206577764|ref|YP_002240896.1| KamA family protein [Klebsiella pneumoniae 342] gi|290512290|ref|ZP_06551657.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55] gi|206566822|gb|ACI08598.1| KamA family protein [Klebsiella pneumoniae 342] gi|289775285|gb|EFD83286.1| lysine 2,3-aminomutase [Klebsiella sp. 1_1_55] Length = 342 Score = 415 bits (1068), Expect = e-114, Method: Composition-based stats. Identities = 107/324 (33%), Positives = 171/324 (52%), Gaps = 5/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL + +TS +L + E++ +E + + + + NPNDP+ RQ Sbjct: 18 QLAN-VVTSPDELLRLLNVDADEKLLAGREARRLFPLRVPRAFIARMEKGNPNDPLLRQV 76 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 + +EE + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR + Sbjct: 77 LTAEEEFIVAPGYSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYA 135 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + ++ + A+ YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR Sbjct: 136 ENQG--TRRNWQTAMDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRI 193 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 HSR+PIV P RI L + + V + H NH E +E AA++ L AG+ LL+Q Sbjct: 194 HSRLPIVIPARITETLASRFQRSSLQVILVNHVNHANEIDDEFRAAMAMLRQAGVTLLNQ 253 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+ND+ + LA+L + + PYYLH D G +HF ++ +E ++I+ L Sbjct: 254 SVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTL 313 Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324 ISG P ++ G K +D Sbjct: 314 ISGYMVPKLAREIGGEPSKTPLDL 337 >gi|288959461|ref|YP_003449802.1| lysine 2,3-aminomutase [Azospirillum sp. B510] gi|288911769|dbj|BAI73258.1| lysine 2,3-aminomutase [Azospirillum sp. B510] Length = 345 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 174/343 (50%), Positives = 231/343 (67%), Gaps = 2/343 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPNDPIARQFIPQK 64 K L S DL A L+ E D ++ +++ Y++ALTP + L +P DP+ Q++P Sbjct: 2 KALHSVSDLVAAGLMTAEAGDAVRTVADRYAVALTPYLREALAGRTDPQDPLYAQYVPSP 61 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E + PEEREDPIGD SP+KGIVHRYPDR+LLK LH C VYCRFCFRREMVG G Sbjct: 62 AEAHSTPEEREDPIGDVARSPVKGIVHRYPDRVLLKPLHACAVYCRFCFRREMVGP-GGE 120 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 L++++ +AALAYI++ Q+WEV+ TGGDPL+LS +RL+ +++ L + HV ++R HSR+ Sbjct: 121 ALTAEELDAALAYIRDHEQVWEVVITGGDPLLLSPRRLRGIVQALSAMPHVGVVRLHSRI 180 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P DP R+ PEL++ L +IA+H NH E + AA++RL AGI L+ Q+VLL Sbjct: 181 PAADPDRLTPELVEALTAPDLATWIAVHINHADELTAPVRAALARLVGAGIPLVGQTVLL 240 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 KGIND L L R V R+KPYYLHHPDLAAGTSHFR T+ EG+ +V L+ K+SGL Sbjct: 241 KGINDSHAALEALFRGMVRNRVKPYYLHHPDLAAGTSHFRPTLAEGRALVTGLRGKLSGL 300 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 CQP Y+LD+PGG+GK I++ G Y +TD VHDY Sbjct: 301 CQPTYVLDIPGGHGKAPAAPAWIEEEGEERYRVTDFTGRVHDY 343 >gi|156932380|ref|YP_001436296.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894] gi|156530634|gb|ABU75460.1| hypothetical protein ESA_00156 [Cronobacter sakazakii ATCC BAA-894] Length = 342 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + I E++ ++ +++ + A + NP DP+ RQ + +EE Sbjct: 23 ITDPDELLHLLNIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTAREE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + +S + G++H+Y +R LL + C V CR+CFRR + Sbjct: 83 FVAAPGFTTDPL-EEQNSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ +AAL YI ++ E+IF+GGDPL+ L+ ++ L I H++ LR HSR+PI Sbjct: 140 NKRNWQAALDYIAAHPELDEIIFSGGDPLMAKDHELEWLVAHLEAIPHIRRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ L E V + H NH E + +++L AG+ LL+QSVLLKG Sbjct: 200 VIPARITDALVRLLGETRLQVLLVNHINHAQEIDDAFREGMAKLRAAGVTLLNQSVLLKG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LA L + + PYYLH D G +HF ++ +E + I+ L ++SG Sbjct: 260 VNDNAATLAALSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSRVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|90424304|ref|YP_532674.1| hypothetical protein RPC_2807 [Rhodopseudomonas palustris BisB18] gi|90106318|gb|ABD88355.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18] Length = 368 Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats. Identities = 177/349 (50%), Positives = 238/349 (68%), Gaps = 4/349 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +L L+ +Q+ + ++ Y++A+T +A LI+P +P+DPIARQ+IP E Sbjct: 20 TLRQPAELAARGLVAADQLPTLDAVAQRYAVAVTEAVAALIDPTDPDDPIARQYIPSAAE 79 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L P ER DPIGD H+PL GIVHR+ DR+L KL++VC VYCRFCFRRE VG K L Sbjct: 80 LVRDPVERADPIGDAAHAPLDGIVHRHTDRVLFKLVNVCAVYCRFCFRRETVGPGKAATL 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + AAL YI+ +IWEVI TGGDPL+LS +RL + + L I HV+I+R HSRVP+ Sbjct: 140 SGEAYRAALDYIRAHPEIWEVILTGGDPLMLSPRRLGEAMSDLAAIDHVKIIRIHSRVPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 +P RI+ EL+ L+ +G V++A+HANHP E S A AA +R+ +AGI ++SQSVLL+G Sbjct: 200 AEPSRISRELVGALQVSGATVWMALHANHPRELSAAARAACARIIDAGIPMVSQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD LA LMR FVE RIKPYYLHH DLA GT+H R T+ EGQ ++ L+ ++SGLCQ Sbjct: 260 VNDDGPTLAALMRGFVECRIKPYYLHHGDLAPGTAHLRTTLAEGQALMRQLRGRVSGLCQ 319 Query: 307 PFYILDLPGGYGKVKIDTHNI----KKVGNGSYCITDHHNIVHDYPPKS 351 P Y+LD+PGGYGK + + + + + Y +TD+ H YPP S Sbjct: 320 PDYVLDIPGGYGKAPVGPNYLTPADEPAADLRYRVTDYCGDAHLYPPTS 368 >gi|254292405|ref|YP_003058428.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC 49814] gi|254040936|gb|ACT57731.1| lysine 2,3-aminomutase YodO family protein [Hirschia baltica ATCC 49814] Length = 348 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 165/344 (47%), Positives = 236/344 (68%), Gaps = 1/344 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 KTL SAQD N + E I +S Y++A+T +A+ + + +DP+ RQF+P + Sbjct: 3 KTLKSAQDFKNLGITSPEITQNIDTVSTKYAVAMTTELADCVKNPSSDDPVLRQFLPLID 62 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL LPEEREDPIGD ++P++GIVHR+ DR+LLK++ +CPVYCRFCFRREMVG K + Sbjct: 63 ELTTLPEEREDPIGDWPNTPVEGIVHRHKDRVLLKIVSICPVYCRFCFRREMVGPDKDNM 122 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + +AA+ YI +IWEVI TGGDP++LS +R +++ + L I HV+I+R+H+R+P Sbjct: 123 LRPEQLDAAIDYIANHPEIWEVILTGGDPMMLSPRRARELTQRLEAIPHVKIIRWHTRMP 182 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + P + E Q +K + K V++A+HANH EFS A A + L +AGI ++SQSVLLK Sbjct: 183 VAKPDIVTAEYAQAIKSSTKSVFVALHANHANEFSNAAKQACANLIDAGIPMVSQSVLLK 242 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ + L++LMRTFVE RI+PYYLHHPD A GTSHFR+++EEGQK+V L+ +SGLC Sbjct: 243 GVNDNLDALSDLMRTFVENRIRPYYLHHPDFAPGTSHFRVSVEEGQKLVQGLRNTLSGLC 302 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPP 349 P Y++D+PGG K + +++ +G + YPP Sbjct: 303 TPTYVVDIPGGVSKAIATPSDAREI-DGQLSLRGQDGQWRAYPP 345 >gi|134299994|ref|YP_001113490.1| lysine 2,3-aminomutase YodO family protein [Desulfotomaculum reducens MI-1] gi|134052694|gb|ABO50665.1| glutamate 2,3-aminomutase [Desulfotomaculum reducens MI-1] Length = 422 Score = 414 bits (1066), Expect = e-114, Method: Composition-based stats. Identities = 115/347 (33%), Positives = 187/347 (53%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ + + + + + + I+++ Y A++P L P+ Q Sbjct: 74 WQMANR-IKDVKVISQLIDLSPAEKEAIEKVGRQYRWAVSPYYMALAMVSGSGGPVWLQA 132 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EE+ EDP+G+ SP++G+ RYPDR+++ + + C +YCR C RR +G Sbjct: 133 IPCIEEVKDR-YGVEDPMGEEYTSPVEGVTRRYPDRLIINVTNQCAMYCRHCQRRRNIG- 190 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + S K E AL YI+E +I +V+ TGGD L+LS ++++ +L L I HV+I R Sbjct: 191 EIDVHKSRKVLEGALQYIRENKEIRDVLITGGDALLLSDRQIEWLLTELDNIPHVEIKRL 250 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ PQRI PEL + L+ P+YI NHP E + EA A L AG++L +Q Sbjct: 251 GTRTPVTMPQRITPELCKILENHP-PIYINTQFNHPLEVTPEAKKACDMLVKAGVVLGNQ 309 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLK IN+ P+++ L ++ + +R++PYY+ H GT HF +++G I+ L+ Sbjct: 310 AVLLKNINNQPDVMKRLNQSLLTIRVRPYYIFHAKAVKGTRHFITGVDDGIAIMEQLRGY 369 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 SGL P YI++ P GYGK + I + N + + Y Sbjct: 370 TSGLAVPTYIINAPNGYGKTPVLPQYIIENKNDQVTLRTWEKRIIPY 416 >gi|189913041|ref|YP_001964930.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|189913370|ref|YP_001964599.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|167777717|gb|ABZ96017.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167781438|gb|ABZ99735.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 354 Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats. Identities = 119/347 (34%), Positives = 189/347 (54%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL+++ +T DL + E+ D + + + A+TP I+ +P+ PI +Q Sbjct: 8 WQLQNR-ITQLADLETKITLTTEERDSFAKAYDQFQFAVTPYYLGRIDNKDPHCPIRKQI 66 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P+ EL E +DP+ + H P+KG+ HRYPDR + + HVC VYCRFC R+ V + Sbjct: 67 LPRAGELVRKQNETDDPLAEEIHMPVKGVTHRYPDRAIWYISHVCAVYCRFCTRKRKVST 126 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T + + E AL Y + ++++ EVI +GGDPL LS L +L L+ I H+ +R Sbjct: 127 PEET-PNRSEWEKALDYFRGETKLKEVILSGGDPLTLSDSSLDYLLGELKKIPHLNQIRI 185 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLS 239 H+R P+ P R+ L + P+Y+ H NHP E S+E + + + + + Sbjct: 186 HTRHPVTMPMRLTESLNSVFSKYF-PLYMVTHFNHPNEISDETKFYVMRMIKEGHVSIFN 244 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL GINDD IL++L + + IKPYYLH D G+S F + +E+G +I L+ Sbjct: 245 QSVLLSGINDDANILSDLNYKLISIGIKPYYLHQCDEVFGSSDFVVPLEKGIEIYRKLRG 304 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 SG+ P Y+ DL GG GKV + ++K + Y ++ ++ Sbjct: 305 FHSGITIPSYVKDLTGGGGKVLLSPDYLQKKTDKGYLFQNYLGDEYE 351 >gi|300920832|ref|ZP_07137231.1| KamA family protein [Escherichia coli MS 115-1] gi|300412197|gb|EFJ95507.1| KamA family protein [Escherichia coli MS 115-1] Length = 342 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLSAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|157147882|ref|YP_001455201.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895] gi|157085087|gb|ABV14765.1| hypothetical protein CKO_03688 [Citrobacter koseri ATCC BAA-895] Length = 342 Score = 413 bits (1063), Expect = e-113, Method: Composition-based stats. Identities = 101/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I E++ ++ +++ + + NPNDP+ RQ + ++E Sbjct: 23 VTNPDELLHLLNIDADEKLLAGRDAKRLFALRVPRSFIARMEKGNPNDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + HS + G++H+Y +R LL + C V CR+CFRR + Sbjct: 83 FVTAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYADNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YI ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L + + + H NH E + A++ L NAG+ LL+QSVLL+G Sbjct: 200 VIPARITDGLAARFARSSLQILLVNHINHANEIDDTFRQAMTTLRNAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L ++SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARRIMRELLTRVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|293417652|ref|ZP_06660274.1| kamA family protein yjeK [Escherichia coli B185] gi|291430370|gb|EFF03368.1| kamA family protein yjeK [Escherichia coli B185] Length = 342 Score = 412 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 101/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ I ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVITSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|220916509|ref|YP_002491813.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter dehalogenans 2CP-1] gi|219954363|gb|ACL64747.1| lysine 2,3-aminomutase YodO family protein [Anaeromyxobacter dehalogenans 2CP-1] Length = 402 Score = 412 bits (1061), Expect = e-113, Method: Composition-based stats. Identities = 122/353 (34%), Positives = 183/353 (51%), Gaps = 5/353 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH LT+A D + + + H +A TP A+L++ +P PI Q Sbjct: 20 WQQRH-ALTTAADFERLFPLTDAERRGFALAAGHTRVAATPYYASLVDRDHPACPIRLQV 78 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S Sbjct: 79 MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ +P R+ L P+++ H NHP E + EA A RL + G+ + +Q Sbjct: 199 ATRAPVTNPMRVTDALAAA-LRRHAPLFVVTHFNHPKECTPEAREACERLVDHGVPVENQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++ + Sbjct: 258 SVLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGR 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350 SGL P +DLPGG GKV + + G + + + + YP Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGEEGARGHWLRNGRGERYFYPEP 370 >gi|260599504|ref|YP_003212075.1| kamA family protein YjeK [Cronobacter turicensis z3032] gi|260218681|emb|CBA34029.1| Uncharacterized kamA family protein yjeK [Cronobacter turicensis z3032] Length = 342 Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats. Identities = 101/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + I E++ ++ +++ + A + NP DP+ RQ + +EE Sbjct: 23 ITDPDELLHLLNIDASEELLAGRDARRLFALRVPRAFAARMEKGNPQDPLLRQVLTSREE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + +S + G++H+Y +R LL + C V CR+CFRR + Sbjct: 83 FVAAPGFTTDPL-EEQNSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYADNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ +AAL YI +++ E+IF+GGDPL+ L+ ++ + I H++ LR HSR+PI Sbjct: 140 NKRNWQAALDYIAAHAELDEIIFSGGDPLMAKDHELEWLVANIEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ L E V + H NH E + A +++L AG+ LL+QSVLLKG Sbjct: 200 VIPARITDALVRLLGETRLQVLLVNHINHAQEIDDAFRAGMTKLRAAGVTLLNQSVLLKG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ L L + + PYYLH D G +HF ++ +E + I+ L ++SG Sbjct: 260 VNDNAATLTALSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARAIMRELLSQVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|78223047|ref|YP_384794.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15] gi|78194302|gb|ABB32069.1| L-lysine 2,3-aminomutase [Geobacter metallireducens GS-15] Length = 344 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 118/341 (34%), Positives = 194/341 (56%), Gaps = 10/341 (2%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++T+ ++L I E + + Y + +T LI P D I RQ +P E Sbjct: 11 SITTPEELAELLDIDPEPLAPL---VRRYPLRITRRYLGLI--GKPGDAIWRQCVPDPCE 65 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L+ ++ DP+ + SP+ G++HRYPDR++ + + C VYCRFC R+ VG Sbjct: 66 LDD--DQLSDPLDEERLSPVPGVIHRYPDRVVWLVSNECAVYCRFCMRKRRVGCPLAGSN 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + A+ YI I +VI +GGDPL+L +RL+ +L LR I HV+++R +R P+ Sbjct: 124 GRSG-DDAVRYIAATPAIRDVILSGGDPLLLDDERLEAILARLRAIPHVEMIRIGTRTPV 182 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 P+RI L + LK P+Y+ H NHP E + EA A +RLA+ GI L +Q+VLL G Sbjct: 183 TLPERITARLCRMLKRY-HPLYVNTHFNHPREITPEATKACARLADTGIPLGNQTVLLAG 241 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+P I+ LM+ + +R++PYY+H DL GT HFR + G I+ +L+ SG+ Sbjct: 242 VNDEPAIMTLLMQRLLAIRVRPYYIHQMDLVRGTGHFRTKVTTGLDIIGALRGHTSGMAT 301 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P++++D GG GK+ + +++ G+ ++ + ++ + +Y Sbjct: 302 PYFVIDAAGGKGKIPLLPDAVERRGD-TWLLRNYRGEIVEY 341 >gi|82779418|ref|YP_405767.1| hypothetical protein SDY_4389 [Shigella dysenteriae Sd197] gi|81243566|gb|ABB64276.1| conserved hypothetical protein [Shigella dysenteriae Sd197] Length = 342 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|331655977|ref|ZP_08356965.1| putative radical SAM domain protein [Escherichia coli M718] gi|331046331|gb|EGI18421.1| putative radical SAM domain protein [Escherichia coli M718] Length = 342 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIERMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|15834381|ref|NP_313154.1| hypothetical protein ECs5127 [Escherichia coli O157:H7 str. Sakai] gi|168747993|ref|ZP_02773015.1| KamA family protein [Escherichia coli O157:H7 str. EC4113] gi|168755334|ref|ZP_02780341.1| KamA family protein [Escherichia coli O157:H7 str. EC4401] gi|168761014|ref|ZP_02786021.1| KamA family protein [Escherichia coli O157:H7 str. EC4501] gi|168766424|ref|ZP_02791431.1| KamA family protein [Escherichia coli O157:H7 str. EC4486] gi|168774523|ref|ZP_02799530.1| KamA family protein [Escherichia coli O157:H7 str. EC4196] gi|168780577|ref|ZP_02805584.1| KamA family protein [Escherichia coli O157:H7 str. EC4076] gi|168784782|ref|ZP_02809789.1| KamA family protein [Escherichia coli O157:H7 str. EC869] gi|168802345|ref|ZP_02827352.1| KamA family protein [Escherichia coli O157:H7 str. EC508] gi|195935938|ref|ZP_03081320.1| hypothetical protein EscherichcoliO157_05645 [Escherichia coli O157:H7 str. EC4024] gi|208808559|ref|ZP_03250896.1| KamA family protein [Escherichia coli O157:H7 str. EC4206] gi|208813031|ref|ZP_03254360.1| KamA family protein [Escherichia coli O157:H7 str. EC4045] gi|208818769|ref|ZP_03259089.1| KamA family protein [Escherichia coli O157:H7 str. EC4042] gi|209396148|ref|YP_002273691.1| KamA family protein [Escherichia coli O157:H7 str. EC4115] gi|217325173|ref|ZP_03441257.1| KamA family protein [Escherichia coli O157:H7 str. TW14588] gi|254796168|ref|YP_003081005.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359] gi|261225269|ref|ZP_05939550.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK2000] gi|261255480|ref|ZP_05948013.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. FRIK966] gi|291285561|ref|YP_003502379.1| KamA family protein [Escherichia coli O55:H7 str. CB9615] gi|13364604|dbj|BAB38550.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai] gi|187769928|gb|EDU33772.1| KamA family protein [Escherichia coli O157:H7 str. EC4196] gi|188017568|gb|EDU55690.1| KamA family protein [Escherichia coli O157:H7 str. EC4113] gi|189001809|gb|EDU70795.1| KamA family protein [Escherichia coli O157:H7 str. EC4076] gi|189357403|gb|EDU75822.1| KamA family protein [Escherichia coli O157:H7 str. EC4401] gi|189363903|gb|EDU82322.1| KamA family protein [Escherichia coli O157:H7 str. EC4486] gi|189368518|gb|EDU86934.1| KamA family protein [Escherichia coli O157:H7 str. EC4501] gi|189374875|gb|EDU93291.1| KamA family protein [Escherichia coli O157:H7 str. EC869] gi|189375646|gb|EDU94062.1| KamA family protein [Escherichia coli O157:H7 str. EC508] gi|208728360|gb|EDZ77961.1| KamA family protein [Escherichia coli O157:H7 str. EC4206] gi|208734308|gb|EDZ82995.1| KamA family protein [Escherichia coli O157:H7 str. EC4045] gi|208738892|gb|EDZ86574.1| KamA family protein [Escherichia coli O157:H7 str. EC4042] gi|209157548|gb|ACI34981.1| KamA family protein [Escherichia coli O157:H7 str. EC4115] gi|209750478|gb|ACI73546.1| hypothetical protein ECs5127 [Escherichia coli] gi|209750480|gb|ACI73547.1| hypothetical protein ECs5127 [Escherichia coli] gi|209750482|gb|ACI73548.1| hypothetical protein ECs5127 [Escherichia coli] gi|209750484|gb|ACI73549.1| hypothetical protein ECs5127 [Escherichia coli] gi|209750486|gb|ACI73550.1| hypothetical protein ECs5127 [Escherichia coli] gi|217321394|gb|EEC29818.1| KamA family protein [Escherichia coli O157:H7 str. TW14588] gi|254595568|gb|ACT74929.1| lysine 2,3-aminomutase [Escherichia coli O157:H7 str. TW14359] gi|290765434|gb|ADD59395.1| KamA family protein [Escherichia coli O55:H7 str. CB9615] gi|320190719|gb|EFW65369.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. EC1212] gi|320638907|gb|EFX08553.1| putative lysine aminomutase [Escherichia coli O157:H7 str. G5101] gi|320644276|gb|EFX13341.1| putative lysine aminomutase [Escherichia coli O157:H- str. 493-89] gi|320649594|gb|EFX18118.1| putative lysine aminomutase [Escherichia coli O157:H- str. H 2687] gi|320654990|gb|EFX22951.1| putative lysine aminomutase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320660497|gb|EFX27958.1| putative lysine aminomutase [Escherichia coli O55:H7 str. USDA 5905] gi|320665766|gb|EFX32803.1| putative lysine aminomutase [Escherichia coli O157:H7 str. LSU-61] gi|326341801|gb|EGD65584.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1125] gi|326346624|gb|EGD70358.1| Lysine 2,3-aminomutase [Escherichia coli O157:H7 str. 1044] Length = 342 Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|283786829|ref|YP_003366694.1| radical SAM superfamily protein [Citrobacter rodentium ICC168] gi|282950283|emb|CBG89930.1| radical SAM superfamily protein [Citrobacter rodentium ICC168] Length = 342 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 101/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLQLDTDENLLAGRDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSQQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIAAPGFSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYTENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ +AAL YI ++ E+IF+GGDPL+ L+ +L L I HV+ LR HSR+P+ Sbjct: 140 NKRNWQAALDYINAHPELDEIIFSGGDPLMAKDHELEWLLTRLEDIGHVKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL + + + H NH E + A+++L AG+ LL+QSVLL+G Sbjct: 200 VIPARITGELAARFARSSLQILLVNHINHANEIDGDFREAMAKLRAAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LA+L + + PYYLH D G +HF +T +E ++I+ L ISG Sbjct: 260 VNDNARTLADLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLISGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K ID Sbjct: 320 PKLAREIGGEPSKTPIDLQ 338 >gi|309787707|ref|ZP_07682318.1| kamA family protein [Shigella dysenteriae 1617] gi|308924457|gb|EFP69953.1| kamA family protein [Shigella dysenteriae 1617] Length = 320 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 1 MTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 60 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 61 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 117 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 118 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 177 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G Sbjct: 178 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 237 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 238 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 297 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 298 PKLAREIGGEPSKTPLDLQ 316 >gi|39996853|ref|NP_952804.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA] gi|39983741|gb|AAR35131.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens PCA] gi|298505867|gb|ADI84590.1| L-lysine 2,3-aminomutase [Geobacter sulfurreducens KN400] Length = 353 Score = 411 bits (1058), Expect = e-113, Method: Composition-based stats. Identities = 124/341 (36%), Positives = 190/341 (55%), Gaps = 10/341 (2%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+A ++ I Q + + Y + +TP L+ P DPI RQ IP E Sbjct: 11 AVTTADEITERFGIDAGQ---LAPVIRRYPMRITPGYLRLV--EAPGDPIWRQCIPDPAE 65 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L +++ DP+ + SP+ G++HRYPDR++ + C VYCRFC R+ VG Sbjct: 66 LCD--DQQSDPLHEERLSPVPGLIHRYPDRVVWVVSGECAVYCRFCMRKRQVGCMTSRHC 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 L YI E I +VI +GGDPL+L +RL+++L L I HV+++R +R P+ Sbjct: 124 -EDPFGEPLRYIAETPAIRDVILSGGDPLLLDDERLEEILARLAAIPHVEMVRIGTRTPV 182 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 P+RI L + LK P+Y+ H NHP E + EA A +RLA+AGI L +QSVLL Sbjct: 183 TLPERITARLCRMLKRY-HPLYVNTHFNHPREITAEAAKACARLADAGIPLGNQSVLLAD 241 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDDP ++ LM+ + +R++PYY+H DL GT HFR + G +I+ +L+ SG+ Sbjct: 242 VNDDPAVMTRLMQLLLSIRVRPYYIHQMDLVRGTGHFRTPVATGLEILTALRGNTSGMAT 301 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y++D PGG GK+ + I + G+ + + + +Y Sbjct: 302 PHYVIDAPGGKGKIPLLPDCISRRGDL-WLLRTYTGETIEY 341 >gi|301023473|ref|ZP_07187251.1| KamA family protein [Escherichia coli MS 69-1] gi|300396989|gb|EFJ80527.1| KamA family protein [Escherichia coli MS 69-1] Length = 342 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NPNDP+ RQ I ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|146309997|ref|YP_001175071.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638] gi|145316873|gb|ABP59020.1| L-lysine 2,3-aminomutase [Enterobacter sp. 638] Length = 342 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 104/319 (32%), Positives = 168/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +TS +L I ++ + +E +++ + + NPNDP+ +Q + K+E Sbjct: 23 ITSPDELLRLLNIDSDENMLAGREAKRLFALRVPRAFVARMEKGNPNDPLLKQVLTSKDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + +S + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVTAPGFSTDPL-EEQNSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENPG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YI ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQVALDYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L+ + + + H NH E E +A+ RL NAG+ LL+QSVLL+G Sbjct: 200 VIPARITDGLVSRFAASPLQILLVNHINHANEIDETFRSAMMRLRNAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LA+L + + PYYLH D G +HF ++ EE ++IV L +SG Sbjct: 260 VNDNAQTLADLSNALFDASVMPYYLHVLDRVQGAAHFMVSDEEARQIVRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|118580185|ref|YP_901435.1| lysine 2,3-aminomutase YodO family protein [Pelobacter propionicus DSM 2379] gi|118502895|gb|ABK99377.1| L-lysine 2,3-aminomutase [Pelobacter propionicus DSM 2379] Length = 346 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 120/322 (37%), Positives = 186/322 (57%), Gaps = 6/322 (1%) Query: 26 DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSP 85 E ++ Y ++P A LI D I +Q IP EL+ + DP+ ++ SP Sbjct: 22 AEFTSVAASYPFRVSPSYAKLIRREG--DAIWKQCIPDLRELDD-AGQCPDPLAEHLLSP 78 Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 + G++HRYPDR++L + + CPVYCRFC R+ VG + + ++ + A+ YI I Sbjct: 79 VPGLIHRYPDRVVLLVSNRCPVYCRFCMRKRHVG-EGDAPMDAQTLKQAMDYIAANPAIR 137 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 ++I +GGDPL+L L +L+ LR I HV I+R +RVP+ P+R+ PEL LK Sbjct: 138 DIILSGGDPLMLDDDSLHHILQQLRAIPHVTIIRIGTRVPVTLPERVTPELCTLLKRF-H 196 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 P+YI H NHP E + + A LA+AGI L +Q+VLL+G+ND + + +L + LR Sbjct: 197 PLYINTHFNHPDEITPLSARACDLLADAGIPLGNQTVLLRGVNDSLDTMRSLQTGLLSLR 256 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++PYY+H DL GT+HFR I G +I+ L+ +SG+ P Y++DLP G GKV I Sbjct: 257 VRPYYIHQMDLVRGTAHFRTPIATGLEIIRGLRGHVSGMAVPQYVIDLPDGKGKVPILPD 316 Query: 326 NIKKVGNGSYCITDHHNIVHDY 347 ++++ G+ + + + Y Sbjct: 317 DVERQGDL-LILRTYQGEMVRY 337 >gi|194434729|ref|ZP_03066981.1| KamA family protein [Shigella dysenteriae 1012] gi|194417010|gb|EDX33127.1| KamA family protein [Shigella dysenteriae 1012] gi|320180662|gb|EFW55589.1| Lysine 2,3-aminomutase [Shigella boydii ATCC 9905] gi|332083146|gb|EGI88377.1| kamA family protein [Shigella boydii 5216-82] Length = 342 Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 168/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FAIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G Sbjct: 200 VIPARITEALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|270264978|ref|ZP_06193241.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13] gi|270040912|gb|EFA14013.1| hypothetical protein SOD_k00110 [Serratia odorifera 4Rx13] Length = 342 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 169/323 (52%), Gaps = 4/323 (1%) Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + +E +++ + A + P + NDP+ RQ + EE Sbjct: 23 ITDPDELLQLLSLNTHPDLPQGREARRLFALRVPRAFAARMRPGDANDPLLRQVLTASEE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FINAPGFTTDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+ Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLIGELEAIAHLKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI PEL + L + V + H NH E E A++++L AG+ LL+QSVLL+G Sbjct: 200 VIPARITPELCRRLSASRLQVLMVTHINHANEIDRELQASMAQLRLAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND+ + LA L + I PYY+H D G +HF ++ +E + I+ +L K+SG Sbjct: 260 INDNADTLAALSNALFDAGILPYYIHVLDKVQGAAHFMVSDDEARAIMQALLSKVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTHNIKK 329 P ++ G K +D H ++ Sbjct: 320 PRLTREVGGKPSKTPLDLHLMQS 342 >gi|26251039|ref|NP_757079.1| hypothetical protein c5231 [Escherichia coli CFT073] gi|227886810|ref|ZP_04004615.1| lysine 2,3-aminomutase [Escherichia coli 83972] gi|300975007|ref|ZP_07172811.1| KamA family protein [Escherichia coli MS 45-1] gi|301047630|ref|ZP_07194695.1| KamA family protein [Escherichia coli MS 185-1] gi|26111471|gb|AAN83653.1|AE016771_164 Hypothetical protein yjeK [Escherichia coli CFT073] gi|227836152|gb|EEJ46618.1| lysine 2,3-aminomutase [Escherichia coli 83972] gi|300300482|gb|EFJ56867.1| KamA family protein [Escherichia coli MS 185-1] gi|300410421|gb|EFJ93959.1| KamA family protein [Escherichia coli MS 45-1] gi|307556316|gb|ADN49091.1| hypothetical protein YjeK [Escherichia coli ABU 83972] gi|315294049|gb|EFU53401.1| KamA family protein [Escherichia coli MS 153-1] Length = 342 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E+ + + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDAEEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|300940634|ref|ZP_07155196.1| KamA family protein [Escherichia coli MS 21-1] gi|306815636|ref|ZP_07449785.1| putative lysine aminomutase [Escherichia coli NC101] gi|331650273|ref|ZP_08351345.1| putative radical SAM domain protein [Escherichia coli M605] gi|331671299|ref|ZP_08372097.1| putative radical SAM domain protein [Escherichia coli TA280] gi|281181244|dbj|BAI57574.1| conserved hypothetical protein [Escherichia coli SE15] gi|300454586|gb|EFK18079.1| KamA family protein [Escherichia coli MS 21-1] gi|305851298|gb|EFM51753.1| putative lysine aminomutase [Escherichia coli NC101] gi|330908490|gb|EGH37009.1| lysine 2,3-aminomutase [Escherichia coli AA86] gi|331040667|gb|EGI12825.1| putative radical SAM domain protein [Escherichia coli M605] gi|331071144|gb|EGI42501.1| putative radical SAM domain protein [Escherichia coli TA280] Length = 342 Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NPNDP+ RQ I ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|157368658|ref|YP_001476647.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans 568] gi|157320422|gb|ABV39519.1| lysine 2,3-aminomutase YodO family protein [Serratia proteamaculans 568] Length = 342 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 104/319 (32%), Positives = 168/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + ++ + +E +++ + + P + NDP+ RQ + EE Sbjct: 23 ITDPDELLQLLSLNTHPELPQGREARRLFALRVPRSFVARMQPGDANDPLLRQVLTASEE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FINAPGFTTDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L ++ L I+H++ LR H+R+P+ Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLIGELEAIEHLKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI PEL + L + V + H NH E E A++++L AG+ LL+QSVLL+G Sbjct: 200 VIPARITPELCRRLSASRLQVLMVTHINHANEIDRELQASMAQLRLAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD + LA L + I PYY+H D G +HF ++ +E + I+ +L KISG Sbjct: 260 INDDADTLAALSNALFDAGILPYYIHVLDKVQGAAHFMVSDDEARTIMQALLGKISGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D H Sbjct: 320 PRLTREVGGKPSKTPLDLH 338 >gi|86158969|ref|YP_465754.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C] gi|85775480|gb|ABC82317.1| L-lysine 2,3-aminomutase [Anaeromyxobacter dehalogenans 2CP-C] Length = 402 Score = 410 bits (1055), Expect = e-112, Method: Composition-based stats. Identities = 121/353 (34%), Positives = 183/353 (51%), Gaps = 5/353 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q RH L +A D + + + H +A TP A+LI+ +P P+ Q Sbjct: 20 WQQRH-ALATAADFERLFPLTPAERRGFALAAGHTRVAATPYYASLIDRDHPGCPVRLQV 78 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E P + +DPIG+ H P++ IVH+YPDR L + C VYCR C RR + S Sbjct: 79 MPSAAEAVPAPGDLDDPIGEEPHRPVRAIVHKYPDRALFLAVDRCAVYCRHCTRRRITFS 138 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 E +A+++ ++ +VI +GGDPL LS ++L +L LR I HVQ+LR Sbjct: 139 DDEGGFDRAAVEEGIAWVRAHREVRDVIVSGGDPLSLSDQKLDGILAGLRAIPHVQVLRV 198 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +R P+ +P R+ E + P+++ H NHP E + EA A RL + G+ + +Q Sbjct: 199 ATRAPVTNPMRVT-EALAAALRRHAPLFVITHFNHPKECTPEAREACERLVDHGVPVENQ 257 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+N IL +L + R++PYYLH DLAAGT H R + G I+ +++ + Sbjct: 258 SVLLRGLNSSARILTDLNERLLTFRVRPYYLHQGDLAAGTGHLRTPLAAGVAILEAMRGR 317 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG---SYCITDHHNIVHDYPPK 350 SGL P +DLPGG GKV + + G + + + + YP Sbjct: 318 TSGLAIPHLAVDLPGGGGKVTLQPQYLAGEGEEGARGHWLRNGRGERYFYPEP 370 >gi|91213696|ref|YP_543682.1| hypothetical protein UTI89_C4744 [Escherichia coli UTI89] gi|110644505|ref|YP_672235.1| hypothetical protein ECP_4390 [Escherichia coli 536] gi|117626495|ref|YP_859818.1| putative lysine aminomutase [Escherichia coli APEC O1] gi|191173357|ref|ZP_03034886.1| KamA family protein [Escherichia coli F11] gi|218561306|ref|YP_002394219.1| lysine aminomutase [Escherichia coli S88] gi|237703813|ref|ZP_04534294.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|300975204|ref|ZP_07172897.1| KamA family protein [Escherichia coli MS 200-1] gi|331660724|ref|ZP_08361656.1| putative radical SAM domain protein [Escherichia coli TA206] gi|91075270|gb|ABE10151.1| Hypothetical protein YjeK [Escherichia coli UTI89] gi|110346097|gb|ABG72334.1| hypothetical protein YjeK (radical SAM superfamily) [Escherichia coli 536] gi|115515619|gb|ABJ03694.1| putative lysine aminomutase [Escherichia coli APEC O1] gi|190906333|gb|EDV65943.1| KamA family protein [Escherichia coli F11] gi|218368075|emb|CAR05882.1| putative lysine aminomutase [Escherichia coli S88] gi|222035919|emb|CAP78664.1| Uncharacterized kamA family protein yjeK [Escherichia coli LF82] gi|226901725|gb|EEH87984.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA] gi|294490194|gb|ADE88950.1| KamA family protein [Escherichia coli IHE3034] gi|300308759|gb|EFJ63279.1| KamA family protein [Escherichia coli MS 200-1] gi|307629218|gb|ADN73522.1| putative lysine aminomutase [Escherichia coli UM146] gi|312948798|gb|ADR29625.1| putative lysine aminomutase [Escherichia coli O83:H1 str. NRG 857C] gi|315288493|gb|EFU47891.1| KamA family protein [Escherichia coli MS 110-3] gi|315297615|gb|EFU56892.1| KamA family protein [Escherichia coli MS 16-3] gi|323950784|gb|EGB46662.1| KamA family protein [Escherichia coli H252] gi|323955577|gb|EGB51340.1| KamA family protein [Escherichia coli H263] gi|324015063|gb|EGB84282.1| KamA family protein [Escherichia coli MS 60-1] gi|331051766|gb|EGI23805.1| putative radical SAM domain protein [Escherichia coli TA206] Length = 342 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NPNDP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|320193527|gb|EFW68164.1| Lysine 2,3-aminomutase [Escherichia coli WV_060327] Length = 342 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ I ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVITSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|218692484|ref|YP_002400696.1| putative lysine aminomutase [Escherichia coli ED1a] gi|218430048|emb|CAR11037.2| putative lysine aminomutase [Escherichia coli ED1a] Length = 342 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NPNDP+ RQ I ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRMPRSFIDRMEKGNPNDPLLRQVITSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|323965534|gb|EGB60988.1| KamA family protein [Escherichia coli M863] gi|327250088|gb|EGE61807.1| kamA family protein [Escherichia coli STEC_7v] Length = 342 Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|323975512|gb|EGB70613.1| KamA family protein [Escherichia coli TW10509] Length = 342 Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|218702846|ref|YP_002410475.1| putative lysine aminomutase [Escherichia coli IAI39] gi|218372832|emb|CAR20711.1| putative lysine aminomutase [Escherichia coli IAI39] Length = 342 Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVFTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|218707761|ref|YP_002415280.1| putative lysine aminomutase [Escherichia coli UMN026] gi|293402777|ref|ZP_06646874.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412] gi|293407873|ref|ZP_06651713.1| kamA family protein yjeK [Escherichia coli B354] gi|298378306|ref|ZP_06988190.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302] gi|300899683|ref|ZP_07117911.1| KamA family protein [Escherichia coli MS 198-1] gi|331665813|ref|ZP_08366707.1| putative radical SAM domain protein [Escherichia coli TA143] gi|218434858|emb|CAR15796.1| putative lysine aminomutase [Escherichia coli UMN026] gi|284924332|emb|CBG37448.1| radical SAM superfamily protein [Escherichia coli 042] gi|291429692|gb|EFF02706.1| lysine 2,3-aminomutase [Escherichia coli FVEC1412] gi|291472124|gb|EFF14606.1| kamA family protein yjeK [Escherichia coli B354] gi|298280640|gb|EFI22141.1| lysine 2,3-aminomutase [Escherichia coli FVEC1302] gi|300356752|gb|EFJ72622.1| KamA family protein [Escherichia coli MS 198-1] gi|331056864|gb|EGI28858.1| putative radical SAM domain protein [Escherichia coli TA143] Length = 342 Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NPNDP+ RQ I ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVEHFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|323189972|gb|EFZ75250.1| kamA family protein [Escherichia coli RN587/1] gi|324008615|gb|EGB77834.1| KamA family protein [Escherichia coli MS 57-2] Length = 342 Score = 409 bits (1053), Expect = e-112, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|215489493|ref|YP_002331924.1| predicted lysine aminomutase [Escherichia coli O127:H6 str. E2348/69] gi|312965822|ref|ZP_07780048.1| kamA family protein [Escherichia coli 2362-75] gi|215267565|emb|CAS12020.1| predicted lysine aminomutase [Escherichia coli O127:H6 str. E2348/69] gi|312289065|gb|EFR16959.1| kamA family protein [Escherichia coli 2362-75] Length = 342 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ I ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLTGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVITSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|16131971|ref|NP_418570.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia coli str. K-12 substr. MG1655] gi|89110867|ref|AP_004647.1| predicted lysine aminomutase [Escherichia coli str. K-12 substr. W3110] gi|238903254|ref|YP_002929050.1| putative lysine aminomutase [Escherichia coli BW2952] gi|256025082|ref|ZP_05438947.1| putative lysine aminomutase [Escherichia sp. 4_1_40B] gi|301027965|ref|ZP_07191250.1| KamA family protein [Escherichia coli MS 196-1] gi|732002|sp|P39280|YJEK_ECOLI RecName: Full=Uncharacterized KamA family protein YjeK gi|536990|gb|AAA97045.1| ORF_f342 [Escherichia coli str. K-12 substr. MG1655] gi|1790589|gb|AAC77106.1| EF-P lysylation protein; weak lysine 2,3-aminomutase [Escherichia coli str. K-12 substr. MG1655] gi|85676898|dbj|BAE78148.1| predicted lysine aminomutase [Escherichia coli str. K12 substr. W3110] gi|238862637|gb|ACR64635.1| predicted lysine aminomutase [Escherichia coli BW2952] gi|260451026|gb|ACX41448.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli DH1] gi|299878944|gb|EFI87155.1| KamA family protein [Escherichia coli MS 196-1] gi|315138701|dbj|BAJ45860.1| putative lysine aminomutase [Escherichia coli DH1] gi|323380464|gb|ADX52732.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli KO11] gi|323940066|gb|EGB36260.1| KamA family protein [Escherichia coli E482] Length = 342 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E+ + + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDAEEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVIAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++C + + + H NH E E A+++L G+ LL+QSVLL+ Sbjct: 200 VIPARITEALVECFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRD 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|320539691|ref|ZP_08039355.1| putative lysine aminomutase [Serratia symbiotica str. Tucson] gi|320030303|gb|EFW12318.1| putative lysine aminomutase [Serratia symbiotica str. Tucson] Length = 342 Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats. Identities = 103/322 (31%), Positives = 171/322 (53%), Gaps = 4/322 (1%) Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + ++ + ++ +++ + A + P + NDP+ RQ + KEE Sbjct: 23 ITNPDELLRLLSLSTHPELSQGRDARRLFALRVPRAFAARMRPGDANDPLLRQVLTAKEE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C + CR+CFRR Sbjct: 83 FINAPGFTTDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+ Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELGWLIGELAAIPHLKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI PEL + L + V + H NH E E AA+++L AG+ LL+QSVL++ Sbjct: 200 VIPARITPELCRWLSASRLQVLMITHINHANEIDRELQAAMAQLRLAGVTLLNQSVLMRR 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD + LA L + I PYY+H D G +HF ++ +E + I+ +L K+SG Sbjct: 260 INDDADTLAALSNALFDAGILPYYIHMLDKVQGATHFMVSDDEARTIMQALLSKVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTHNIK 328 P ++ G K +D H I+ Sbjct: 320 PRLTREVGGKPSKTPLDLHLIQ 341 >gi|168231369|ref|ZP_02656427.1| KamA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|194472138|ref|ZP_03078122.1| KamA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194458502|gb|EDX47341.1| KamA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|205334318|gb|EDZ21082.1| KamA family protein [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] Length = 342 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 103/319 (32%), Positives = 171/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L +AG+ LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|218551416|ref|YP_002385208.1| lysine aminomutase [Escherichia fergusonii ATCC 35469] gi|218358958|emb|CAQ91618.1| putative lysine aminomutase [Escherichia fergusonii ATCC 35469] gi|324112256|gb|EGC06234.1| KamA family protein [Escherichia fergusonii B253] gi|325499684|gb|EGC97543.1| lysine aminomutase [Escherichia fergusonii ECD227] Length = 342 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|320354450|ref|YP_004195789.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032] gi|320122952|gb|ADW18498.1| L-lysine 2,3-aminomutase [Desulfobulbus propionicus DSM 2032] Length = 373 Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats. Identities = 132/348 (37%), Positives = 192/348 (55%), Gaps = 9/348 (2%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L +T + L +A I ++ ++ + HY + ++ LI H P+ +Q +P Sbjct: 32 LSSTFITRPEQLAHALAIP---LEPLQAVHAHYPLRISAYYLQLIKQHGL--PLWKQAVP 86 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 +ELN DP+ + N SP+ +VH+YPDR L + C +YCRFC R+ VG + Sbjct: 87 DLKELNDSSG-LVDPLDEENLSPVPCLVHKYPDRALFLVCSECAMYCRFCTRKRKVG-KP 144 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 V++ + A L Y+ I +V+ +GGDP +L RL+++LK LR I V +R + Sbjct: 145 DMVINDQTIAAGLEYLARTPAITDVLVSGGDPFMLPLSRLEQILKALRAIPSVVTIRIGT 204 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 RVP P R+ L LK+ P+YI H NHP E + EA A RLA+AGI L Q+V Sbjct: 205 RVPCTLPSRVTLRLAAMLKKY-HPLYINTHFNHPAEITPEAALACGRLADAGIPLGCQTV 263 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LL+G+ND PE + LMR + +R+KPYYL DL GTSHFR TIE G I+ L +S Sbjct: 264 LLRGVNDSPETIKMLMRQLLRIRVKPYYLFQADLTRGTSHFRTTIETGVDIMRQLIGHVS 323 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 G+ P Y LD PGG GK+ + H I +G + T + ++ YP + Sbjct: 324 GMAVPTYALDAPGGGGKIPLTPHYINSLGK-TLEFTTYRHLPCSYPNE 370 >gi|194437302|ref|ZP_03069400.1| KamA family protein [Escherichia coli 101-1] gi|253775226|ref|YP_003038057.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|254164078|ref|YP_003047186.1| putative lysine aminomutase [Escherichia coli B str. REL606] gi|297521176|ref|ZP_06939562.1| predicted lysine aminomutase [Escherichia coli OP50] gi|300929255|ref|ZP_07144732.1| KamA family protein [Escherichia coli MS 187-1] gi|194423858|gb|EDX39847.1| KamA family protein [Escherichia coli 101-1] gi|242379672|emb|CAQ34495.1| lysine 2,3-aminomutase [Escherichia coli BL21(DE3)] gi|253326270|gb|ACT30872.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli 'BL21-Gold(DE3)pLysS AG'] gi|253975979|gb|ACT41650.1| predicted lysine aminomutase [Escherichia coli B str. REL606] gi|253980135|gb|ACT45805.1| predicted lysine aminomutase [Escherichia coli BL21(DE3)] gi|300462790|gb|EFK26283.1| KamA family protein [Escherichia coli MS 187-1] gi|323960335|gb|EGB55974.1| KamA family protein [Escherichia coli H489] gi|323970596|gb|EGB65855.1| KamA family protein [Escherichia coli TA007] Length = 342 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P R+ L++ + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|157156524|ref|YP_001465646.1| KamA family protein [Escherichia coli E24377A] gi|157163612|ref|YP_001460930.1| KamA family protein [Escherichia coli HS] gi|191165672|ref|ZP_03027512.1| KamA family protein [Escherichia coli B7A] gi|193065734|ref|ZP_03046798.1| KamA family protein [Escherichia coli E22] gi|194428975|ref|ZP_03061508.1| KamA family protein [Escherichia coli B171] gi|209921637|ref|YP_002295721.1| hypothetical protein ECSE_4446 [Escherichia coli SE11] gi|218556701|ref|YP_002389615.1| putative lysine aminomutase [Escherichia coli IAI1] gi|218697896|ref|YP_002405563.1| putative lysine aminomutase [Escherichia coli 55989] gi|256019792|ref|ZP_05433657.1| putative lysine aminomutase [Shigella sp. D9] gi|260846979|ref|YP_003224757.1| putative lysine aminomutase [Escherichia coli O103:H2 str. 12009] gi|260858300|ref|YP_003232191.1| putative lysine aminomutase [Escherichia coli O26:H11 str. 11368] gi|260870945|ref|YP_003237347.1| putative lysine aminomutase [Escherichia coli O111:H- str. 11128] gi|293476459|ref|ZP_06664867.1| kamA family protein yjeK [Escherichia coli B088] gi|300816554|ref|ZP_07096775.1| KamA family protein [Escherichia coli MS 107-1] gi|300821239|ref|ZP_07101387.1| KamA family protein [Escherichia coli MS 119-7] gi|300905975|ref|ZP_07123700.1| KamA family protein [Escherichia coli MS 84-1] gi|300922447|ref|ZP_07138566.1| KamA family protein [Escherichia coli MS 182-1] gi|301302564|ref|ZP_07208694.1| KamA family protein [Escherichia coli MS 124-1] gi|301325908|ref|ZP_07219331.1| KamA family protein [Escherichia coli MS 78-1] gi|307312017|ref|ZP_07591654.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W] gi|309796959|ref|ZP_07691359.1| KamA family protein [Escherichia coli MS 145-7] gi|331671054|ref|ZP_08371887.1| putative radical SAM domain protein [Escherichia coli TA271] gi|331680279|ref|ZP_08380938.1| putative radical SAM domain protein [Escherichia coli H591] gi|332280930|ref|ZP_08393343.1| KamA family protein [Shigella sp. D9] gi|157069292|gb|ABV08547.1| KamA family protein [Escherichia coli HS] gi|157078554|gb|ABV18262.1| KamA family protein [Escherichia coli E24377A] gi|190904367|gb|EDV64076.1| KamA family protein [Escherichia coli B7A] gi|192926603|gb|EDV81233.1| KamA family protein [Escherichia coli E22] gi|194413028|gb|EDX29317.1| KamA family protein [Escherichia coli B171] gi|209914896|dbj|BAG79970.1| conserved hypothetical protein [Escherichia coli SE11] gi|218354628|emb|CAV01600.1| putative lysine aminomutase [Escherichia coli 55989] gi|218363470|emb|CAR01124.1| putative lysine aminomutase [Escherichia coli IAI1] gi|257756949|dbj|BAI28451.1| predicted lysine aminomutase [Escherichia coli O26:H11 str. 11368] gi|257762126|dbj|BAI33623.1| predicted lysine aminomutase [Escherichia coli O103:H2 str. 12009] gi|257767301|dbj|BAI38796.1| predicted lysine aminomutase [Escherichia coli O111:H- str. 11128] gi|291320912|gb|EFE60354.1| kamA family protein yjeK [Escherichia coli B088] gi|300402209|gb|EFJ85747.1| KamA family protein [Escherichia coli MS 84-1] gi|300421205|gb|EFK04516.1| KamA family protein [Escherichia coli MS 182-1] gi|300526128|gb|EFK47197.1| KamA family protein [Escherichia coli MS 119-7] gi|300530784|gb|EFK51846.1| KamA family protein [Escherichia coli MS 107-1] gi|300842089|gb|EFK69849.1| KamA family protein [Escherichia coli MS 124-1] gi|300847324|gb|EFK75084.1| KamA family protein [Escherichia coli MS 78-1] gi|306907824|gb|EFN38325.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli W] gi|308119372|gb|EFO56634.1| KamA family protein [Escherichia coli MS 145-7] gi|315063463|gb|ADT77790.1| predicted lysine aminomutase [Escherichia coli W] gi|315255490|gb|EFU35458.1| KamA family protein [Escherichia coli MS 85-1] gi|320200721|gb|EFW75307.1| Lysine 2,3-aminomutase [Escherichia coli EC4100B] gi|323156036|gb|EFZ42198.1| kamA family protein [Escherichia coli EPECa14] gi|323171580|gb|EFZ57226.1| kamA family protein [Escherichia coli LT-68] gi|323182253|gb|EFZ67663.1| kamA family protein [Escherichia coli 1357] gi|323946085|gb|EGB42121.1| KamA family protein [Escherichia coli H120] gi|324019385|gb|EGB88604.1| KamA family protein [Escherichia coli MS 117-3] gi|324118714|gb|EGC12606.1| KamA family protein [Escherichia coli E1167] gi|331061643|gb|EGI33569.1| putative radical SAM domain protein [Escherichia coli TA271] gi|331071742|gb|EGI43078.1| putative radical SAM domain protein [Escherichia coli H591] gi|332103282|gb|EGJ06628.1| KamA family protein [Shigella sp. D9] gi|333010296|gb|EGK29729.1| kamA family protein [Shigella flexneri VA-6] Length = 342 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|193067826|ref|ZP_03048792.1| KamA family protein [Escherichia coli E110019] gi|192958801|gb|EDV89238.1| KamA family protein [Escherichia coli E110019] Length = 342 Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|323176095|gb|EFZ61687.1| kamA family protein [Escherichia coli 1180] gi|333011130|gb|EGK30544.1| kamA family protein [Shigella flexneri K-272] Length = 320 Score = 407 bits (1048), Expect = e-112, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 1 MTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 60 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 61 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 117 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 118 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 177 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 178 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 237 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 238 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 297 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 298 PKLAREIGGEPSKTPLDLQ 316 >gi|74314635|ref|YP_313054.1| hypothetical protein SSON_4330 [Shigella sonnei Ss046] gi|73858112|gb|AAZ90819.1| conserved hypothetical protein [Shigella sonnei Ss046] Length = 342 Score = 407 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DPI RQ + ++E Sbjct: 23 VTDPGELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPILRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|333012676|gb|EGK32056.1| kamA family protein [Shigella flexneri K-227] Length = 342 Score = 407 bits (1048), Expect = e-111, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGKPSKTPLDLQ 338 >gi|323166756|gb|EFZ52513.1| kamA family protein [Shigella sonnei 53G] Length = 320 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DPI RQ + ++E Sbjct: 1 MTDPGELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPILRQVLTSQDE 60 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 61 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 117 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 118 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 177 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 178 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 237 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 238 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 297 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 298 PKLAREIGGEPSKTPLDLQ 316 >gi|332346225|gb|AEE59559.1| conserved hypothetical protein [Escherichia coli UMNK88] Length = 342 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P R+ L++ + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARVTDALVERFSHTTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDNVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|238750049|ref|ZP_04611552.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC 43380] gi|238711593|gb|EEQ03808.1| Uncharacterized kamA family protein yjeK [Yersinia rohdei ATCC 43380] Length = 335 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 98/318 (30%), Positives = 163/318 (51%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + + + + + + P NP+DP+ Q + +EE Sbjct: 15 ITDPDELLRILFLNEHPDLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQVLTAREE 74 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 75 FITAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR H+R+P+ Sbjct: 132 NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDNELSWLLDELESIPHIKRLRIHTRLPV 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L E+ V + H NH E ++ ++++L AG+ LL+QSVLL+G Sbjct: 192 VIPARITAALCQRLSESRLQVLMVTHINHANEIDQDLRDSMAQLKRAGVTLLNQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD E+LA L + I PYY+H D G +HF + +E ++++ L ++SG Sbjct: 252 VNDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 312 PRLAREIGGQPSKTPLDL 329 >gi|15804738|ref|NP_290779.1| hypothetical protein Z5751 [Escherichia coli O157:H7 EDL933] gi|12519128|gb|AAG59345.1|AE005648_7 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933] Length = 342 Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDP + L +L L I H++ R HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPXMAKDHELDWLLTQLEAIPHIKRXRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L AG+ LL+QSVLL+G Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|329114964|ref|ZP_08243719.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001] gi|326695407|gb|EGE47093.1| L-lysine 2,3-aminomutase [Acetobacter pomorum DM001] Length = 349 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 159/342 (46%), Positives = 218/342 (63%), Gaps = 8/342 (2%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R KTL + DL A L+ +Q + + +++ HY+ A+ P +LI +P+DPI Q +P Sbjct: 11 RRKTLRTPDDLIAAGLVPPQQHEMLDDVAQHYATAIPPAFLDLI--TSPDDPIGVQVVPS 68 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 +EL I PEER DPIGDN SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G Sbjct: 69 AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 VL E AL +++ QI EVI TGGDPL+LS +RL ++ L + HV +R HSR Sbjct: 129 -VLDDAALEQALEWLRTHKQIREVILTGGDPLMLSPRRLGHIVAELSRMPHVTTIRVHSR 187 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+ DP+R+ L+ L E K +++A+H NH E SE A A + R+ GI LL QSVL Sbjct: 188 VPVADPERVTDALLDAL-ETNKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+ND + L +L R VE R++PYYLH D A GT+HF + +EEGQ+++A L+ +++G Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345 L P Y+LD+PGGYGKV + ++ G + D H Sbjct: 307 LAWPLYVLDIPGGYGKVPLGPEYVQ----GPQQVKDPKGETH 344 >gi|237729080|ref|ZP_04559561.1| conserved hypothetical protein [Citrobacter sp. 30_2] gi|226908809|gb|EEH94727.1| conserved hypothetical protein [Citrobacter sp. 30_2] Length = 342 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 101/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + I E++ ++ +++ + + NP+DP+ RQ + +EE Sbjct: 23 VTDPDELLHLLNIDADEKLLAGRDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTAQEE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVAAPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + A+ YI ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQVAIDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+S L AG+ LL+QSVLL+G Sbjct: 200 VIPARITEGLVERFAHSSLQILLVNHINHANEIDETFRQAMSSLRAAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARRIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|300715020|ref|YP_003739823.1| conserved uncharacterized protein [Erwinia billingiae Eb661] gi|299060856|emb|CAX57963.1| conserved uncharacterized protein [Erwinia billingiae Eb661] Length = 342 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 161/319 (50%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + ++ + +++ + A+ + +P DP+ Q I +E Sbjct: 23 ITDPNELLQLLGLDSHPELTAGSDARRLFALRVPRAFASRMQKGDPQDPLLLQVITASQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FVDAPGYSTDPLDEQS-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YI+E+ ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+ Sbjct: 140 NKRNWQQALEYIREQPELDEIIFSGGDPLMAKDSELDWLIGELEQIPHLKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L ++ V + H NH E + A+ L +AG+ LL+QSVLL+ Sbjct: 200 VIPSRITRTLCQRLAQSRLQVLMVTHINHAQEIDDALRDALQLLKSAGVTLLNQSVLLRN 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD LA L + + PYYLH D G +HF ++ ++ + I+ L +SG Sbjct: 260 INDDATTLATLSNALFDAGVLPYYLHVLDKVQGAAHFYVSDDDARAIMRELLANVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|161617604|ref|YP_001591569.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|167553577|ref|ZP_02347326.1| KamA family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|168822537|ref|ZP_02834537.1| KamA family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194444516|ref|YP_002043593.1| KamA family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|200386594|ref|ZP_03213206.1| KamA family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205355095|ref|YP_002228896.1| hypothetical protein SG4176 [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207859482|ref|YP_002246133.1| hypothetical protein SEN4103 [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|161366968|gb|ABX70736.1| hypothetical protein SPAB_05464 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194403179|gb|ACF63401.1| KamA family protein [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|199603692|gb|EDZ02237.1| KamA family protein [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|205274876|emb|CAR39942.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|205322004|gb|EDZ09843.1| KamA family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205341061|gb|EDZ27825.1| KamA family protein [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|206711285|emb|CAR35663.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|320088762|emb|CBY98520.1| L-lysine 2,3-aminomutase LAM; KAM [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|326630252|gb|EGE36595.1| hypothetical protein SG9_4262 [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 342 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|294675951|ref|YP_003576566.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003] gi|294474771|gb|ADE84159.1| L-lysine 2,3-aminomutase [Rhodobacter capsulatus SB 1003] Length = 350 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 159/347 (45%), Positives = 211/347 (60%), Gaps = 5/347 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 LT +DL L+ Q+ ++ +++ + I +TP + I P DP+A QF+P E Sbjct: 8 ALTRPEDLLAEGLVTPGQMPDLTQVAQDFRIRVTPAMRAAI--TAPADPVAAQFVPSAAE 65 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L PEER DPIGD HSP G+ HRYPDR +L + C VYCRFCFRRE VG + L Sbjct: 66 LITRPEERADPIGDAVHSPAPGLTHRYPDRAILHITKTCDVYCRFCFRRETVG--ETGPL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 D AL YI + E+I TGGDPL LS +RL+ VL L I H+ LRFHSRVP+ Sbjct: 124 PEPDLAQALEYIAATPALREIILTGGDPLTLSPRRLEDVLTRLSAIPHITTLRFHSRVPV 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+RI P L+ L+ V++ +H NH E + A AA++RL +AG+ LLSQSVLLKG Sbjct: 184 VAPERITPALVALLRAQRPAVWVVVHTNHAQELTAPARAALARLVDAGVPLLSQSVLLKG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + L +L R + R+KPYYLHH DLA GT HFR TI G+ ++A L+ +SG Sbjct: 244 VNDSHDALRDLFRALQDCRVKPYYLHHCDLAPGTGHFRTTIAAGRALMAGLRGPLSGAAI 303 Query: 307 PFYILDLPGGYGKVKIDTHNI-KKVGNGSYCITDHHNIVHDYPPKSS 352 P Y+LD+PGG+GKV I ++ G + +TD VHDY +S Sbjct: 304 PTYVLDIPGGFGKVPITADHVAPGARPGLWRVTDWRGGVHDYADPAS 350 >gi|170021843|ref|YP_001726797.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC 8739] gi|169756771|gb|ACA79470.1| lysine 2,3-aminomutase YodO family protein [Escherichia coli ATCC 8739] Length = 342 Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPEDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|198243525|ref|YP_002218222.1| KamA family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|197938041|gb|ACH75374.1| KamA family protein [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|326626024|gb|EGE32369.1| KamA family protein [Salmonella enterica subsp. enterica serovar Dublin str. 3246] Length = 342 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|170679776|ref|YP_001746542.1| KamA family protein [Escherichia coli SMS-3-5] gi|170517494|gb|ACB15672.1| KamA family protein [Escherichia coli SMS-3-5] Length = 342 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NPNDP+ RQ I ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPNDPLLRQVITSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQIALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+ Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRD 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|258541375|ref|YP_003186808.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01] gi|256632453|dbj|BAH98428.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01] gi|256635510|dbj|BAI01479.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-03] gi|256638565|dbj|BAI04527.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-07] gi|256641619|dbj|BAI07574.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-22] gi|256644674|dbj|BAI10622.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-26] gi|256647729|dbj|BAI13670.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-32] gi|256650782|dbj|BAI16716.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256653773|dbj|BAI19700.1| lysine 2,3-aminomutase [Acetobacter pasteurianus IFO 3283-12] Length = 349 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 159/342 (46%), Positives = 217/342 (63%), Gaps = 8/342 (2%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R KTL + DL A L+ +Q + + +++ HY+ A+ P +LI P+DPI Q +P Sbjct: 11 RRKTLRTPDDLIAAGLVPPKQHEMLDDVAQHYATAIPPAFLDLI--TAPDDPIGVQVVPS 68 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 +EL I PEER DPIGDN SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G Sbjct: 69 AQELEIAPEERSDPIGDNALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG 128 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 VL E AL +++ QI EVI TGGDPL+LS +RL ++ L + HV +R HSR Sbjct: 129 -VLDDAALEQALEWLRTHEQIREVILTGGDPLMLSPRRLGHIVAALSAMPHVTTIRVHSR 187 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+ DP+R+ L+ L E K +++A+H NH E SE A A + R+ GI LL QSVL Sbjct: 188 VPVADPERVTDALLDAL-ETDKAMWMAVHINHAREMSEPARACLKRIVRRGIPLLGQSVL 246 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+ND + L +L R VE R++PYYLH D A GT+HF + +EEGQ+++A L+ +++G Sbjct: 247 LRGVNDSEQALEDLFRAMVETRMRPYYLHQLDPAPGTAHFHVPVEEGQRLLAGLRGRVTG 306 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345 L P Y+LD+PGGYGKV + ++ G + D H Sbjct: 307 LAWPLYVLDIPGGYGKVPLGPDYVQ----GPKQVKDPKGTTH 344 >gi|204926922|ref|ZP_03218124.1| KamA family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|204323587|gb|EDZ08782.1| KamA family protein [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|322615499|gb|EFY12419.1| hypothetical protein SEEM315_10044 [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618559|gb|EFY15448.1| hypothetical protein SEEM971_10303 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322622028|gb|EFY18878.1| hypothetical protein SEEM973_17977 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322627100|gb|EFY23892.1| hypothetical protein SEEM974_00362 [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322631059|gb|EFY27823.1| hypothetical protein SEEM201_05188 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322637722|gb|EFY34423.1| hypothetical protein SEEM202_03729 [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322642386|gb|EFY38990.1| hypothetical protein SEEM954_03902 [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322645647|gb|EFY42172.1| hypothetical protein SEEM054_18690 [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322650513|gb|EFY46921.1| hypothetical protein SEEM675_15304 [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322653465|gb|EFY49795.1| hypothetical protein SEEM965_03844 [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322659708|gb|EFY55951.1| hypothetical protein SEEM19N_08219 [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662081|gb|EFY58297.1| hypothetical protein SEEM801_16251 [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322666170|gb|EFY62348.1| hypothetical protein SEEM507_03054 [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322672590|gb|EFY68701.1| hypothetical protein SEEM877_15409 [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322676020|gb|EFY72091.1| hypothetical protein SEEM867_14623 [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322680504|gb|EFY76542.1| hypothetical protein SEEM180_12388 [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322684602|gb|EFY80606.1| hypothetical protein SEEM600_17732 [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323192917|gb|EFZ78143.1| hypothetical protein SEEM581_21258 [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323197207|gb|EFZ82347.1| hypothetical protein SEEM501_11096 [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323201676|gb|EFZ86740.1| hypothetical protein SEEM460_21711 [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323206190|gb|EFZ91152.1| hypothetical protein SEEM020_11145 [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323213200|gb|EFZ98002.1| hypothetical protein SEEM6152_12673 [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323215572|gb|EGA00316.1| hypothetical protein SEEM0077_07868 [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323219558|gb|EGA04043.1| hypothetical protein SEEM0047_21028 [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323227861|gb|EGA12015.1| hypothetical protein SEEM0055_19496 [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323229030|gb|EGA13159.1| hypothetical protein SEEM0052_05250 [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236358|gb|EGA20434.1| hypothetical protein SEEM3312_18736 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323237522|gb|EGA21583.1| hypothetical protein SEEM5258_19717 [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323241812|gb|EGA25841.1| hypothetical protein SEEM1156_12637 [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323248039|gb|EGA31976.1| putative lysine aminomutase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323254629|gb|EGA38440.1| putative lysine aminomutase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323258311|gb|EGA41988.1| putative lysine aminomutase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323259588|gb|EGA43222.1| hypothetical protein SEEM8284_10232 [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323265861|gb|EGA49357.1| putative lysine aminomutase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270305|gb|EGA53753.1| putative lysine aminomutase [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 342 Score = 406 bits (1045), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|213052305|ref|ZP_03345183.1| hypothetical protein Salmoneentericaenterica_04842 [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213428698|ref|ZP_03361448.1| hypothetical protein SentesTyphi_26121 [Salmonella enterica subsp. enterica serovar Typhi str. E02-1180] Length = 342 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|261823176|ref|YP_003261282.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae WPP163] gi|261607189|gb|ACX89675.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium wasabiae WPP163] Length = 348 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 100/318 (31%), Positives = 163/318 (51%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + ++ + + +++ + A + +P+DP+ Q + +EE Sbjct: 23 ITDPDELLQLLALNDHAKLRQGTDARRLFALRVPRAFAARMQKGDPDDPLLLQVLTAREE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + HS + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FIATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L ++ L +I H++ LR HSR+P+ Sbjct: 140 NKANWRQALDYIRQHPELNEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L L + V + H NHP E + +++RL AG+ LL+QSVLL+G Sbjct: 200 VIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND E LA L + I PYYLH D G +HF + E + +V +L +K+SG Sbjct: 260 VNDSAETLAQLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARVLVKALMKKVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PRLAREIGGEASKTPLDL 337 >gi|168467049|ref|ZP_02700897.1| KamA family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|195630645|gb|EDX49257.1| KamA family protein [Salmonella enterica subsp. enterica serovar Newport str. SL317] Length = 342 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNALTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|168237064|ref|ZP_02662122.1| KamA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|194737300|ref|YP_002117279.1| KamA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|194712802|gb|ACF92023.1| KamA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197290014|gb|EDY29373.1| KamA family protein [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] Length = 342 Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSHLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|30065523|ref|NP_839694.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T] gi|30043787|gb|AAP19506.1| hypothetical protein S4569 [Shigella flexneri 2a str. 2457T] gi|281603612|gb|ADA76596.1| KamA family protein [Shigella flexneri 2002017] gi|313646382|gb|EFS10844.1| kamA family protein [Shigella flexneri 2a str. 2457T] gi|332749021|gb|EGJ79444.1| kamA family protein [Shigella flexneri K-671] gi|332749289|gb|EGJ79710.1| kamA family protein [Shigella flexneri 4343-70] gi|332761892|gb|EGJ92166.1| kamA family protein [Shigella flexneri 2747-71] gi|332763192|gb|EGJ93435.1| kamA family protein [Shigella flexneri 2930-71] gi|333009379|gb|EGK28835.1| kamA family protein [Shigella flexneri K-218] gi|333011918|gb|EGK31303.1| kamA family protein [Shigella flexneri K-304] Length = 342 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|161505162|ref|YP_001572274.1| hypothetical protein SARI_03299 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160866509|gb|ABX23132.1| hypothetical protein SARI_03299 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 342 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 172/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ E++ ++ + +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEANEKLRAGQDARHLFALRVPRAFIARMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+P+ Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L G+ LL+QSVLL+G Sbjct: 200 VIPARITNELVARFDQSRLQILLVNHTNHANEVDEAFCLAMKKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNAKTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMITDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|62182782|ref|YP_219199.1| hypothetical protein SC4212 [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|62130415|gb|AAX68118.1| putative aminomutase [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|322717283|gb|EFZ08854.1| Elongator protein [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] Length = 342 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWRVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G++LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVMLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|224586177|ref|YP_002639976.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|224470705|gb|ACN48535.1| hypothetical protein SPC_4483 [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] Length = 342 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G++LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVMLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|310816895|ref|YP_003964859.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium vulgare Y25] gi|308755630|gb|ADO43559.1| lysine 2,3-aminomutase YodO family protein [Ketogulonicigenium vulgare Y25] Length = 343 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 152/340 (44%), Positives = 205/340 (60%), Gaps = 14/340 (4%) Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77 LI ++ ++ + + +TP + I + D + QF+P + ELN+LP E DP Sbjct: 4 GLISPADAAALRPVTETFRMRITPQMRTAITRAD--DGVGLQFVPDRRELNVLPSELTDP 61 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 IGD HSP KGI HRYPDR++ + VC VYCRFCFRRE+VG VL + D AAL Y Sbjct: 62 IGDGAHSPTKGITHRYPDRVIFHVTQVCEVYCRFCFRREVVGENG--VLPAGDVAAALDY 119 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197 I+ I EVI TGGDPL LS +RL ++ L I HV ++R H+RVP+V P RI PE+I Sbjct: 120 IRRTPAINEVILTGGDPLSLSPRRLHEITTALAAIPHVGLMRIHTRVPVVAPNRITPEMI 179 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEA----------IAAISRLANAGIILLSQSVLLKGI 247 L G ++ +H NHP EF EA +AA+ L AG+ LLSQSVLL+G+ Sbjct: 180 AALTAPGLQTWLVLHTNHPQEFIPEAGGALEFIPEAVAALDLLRTAGVPLLSQSVLLRGV 239 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND +L +L T + L +KPYYLHH DLA GTSH+R TI G+ ++ +L+ +ISG P Sbjct: 240 NDSVAVLKSLFTTLLRLGVKPYYLHHCDLARGTSHYRTTIAAGRALMRALRGQISGSALP 299 Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 Y+LD+PGG+GKV I +G + +TD + H Y Sbjct: 300 TYVLDIPGGFGKVPITADYFDGGADGRWQVTDPNGGTHIY 339 >gi|296114565|ref|ZP_06833218.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter hansenii ATCC 23769] gi|295978921|gb|EFG85646.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter hansenii ATCC 23769] Length = 351 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 145/341 (42%), Positives = 214/341 (62%), Gaps = 4/341 (1%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +TL + +DL A L+ + ++ +++ Y+ A+ P A LI +P+DPI Q IP Sbjct: 11 RTLRTVRDLVEAGLVSQAAQPALEAVAHDYATAIPPAFAALI--EHPDDPIGLQVIPDPA 68 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL+ EER DPIGD+ SP+ GIVHRY DR LLK L +CP+YCRFCFRRE VG G V Sbjct: 69 ELHTTTEERSDPIGDDALSPVPGIVHRYADRALLKPLLICPLYCRFCFRREHVGPDGG-V 127 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L E AL +++ I EVI +GGDP++LS +R+ +++ L + HV +R H+RVP Sbjct: 128 LDDAALERALDWLRAHPAIGEVILSGGDPMMLSPRRMGHIIRALEAMPHVHTIRIHTRVP 187 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP+R+ +++ L + +++ IHANH E + +A AI R+ I +++QSVLL+ Sbjct: 188 VADPERVTADMMAAL-DTTCSLWMVIHANHARELTPQARKAIRRMQAQAIPVIAQSVLLR 246 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND P+ L +L+R V R+KPYYLH D A GTS FR+ I EGQ+++A+L+ +++GL Sbjct: 247 GVNDTPQALEDLLRALVAARVKPYYLHQLDPAPGTSRFRVPIAEGQRLLAALRGRVTGLA 306 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 P Y+LD+PGG+GKV I + V + D H Sbjct: 307 WPTYVLDIPGGHGKVPIGPGYLDTVEGMGMQVRDPQGRPHR 347 >gi|289809541|ref|ZP_06540170.1| hypothetical protein Salmonellaentericaenterica_35962 [Salmonella enterica subsp. enterica serovar Typhi str. AG3] Length = 337 Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 18 VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 77 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 78 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 134 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 135 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 194 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G Sbjct: 195 VIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 254 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 255 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 314 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 315 PRLAREIGGEPSKTPLDLQ 333 >gi|290476545|ref|YP_003469450.1| putative aminomutase [Xenorhabdus bovienii SS-2004] gi|289175883|emb|CBJ82686.1| putative aminomutase [Xenorhabdus bovienii SS-2004] Length = 343 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 97/318 (30%), Positives = 158/318 (49%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + E E + + + A + +P+DP+ Q + +EE Sbjct: 23 ITDPDELLQLLSLNTHAMLKEGNEAKRLFPLRVPRAFAARMKKGDPHDPLLLQVLTAQEE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + HS + G++H+Y +R LL + C V CR+CFRR + Sbjct: 83 FETHPGFSTDPL-EEQHSAVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY--EDNKG 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + AL YI++ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+ Sbjct: 140 NKNNWQLALDYIEQHPELDEIIFSGGDPLMAKDHELDWLMTRLESISHIKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L +++ + + H NH E + L AG+ LL+QSVLL+ Sbjct: 200 VIPDRITLSLCNRFEKSQLQIIMVTHINHANEIDNTFRDKMMWLKQAGVTLLNQSVLLRN 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + LA+L T + I PYY+H D G +HF + EE + I+ L KISG Sbjct: 260 VNDSADTLADLSNTLFDAGILPYYIHILDKVQGAAHFLVGDEEAKAIMRELLTKISGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PCLAREIGGEPSKTPLDL 337 >gi|16767582|ref|NP_463197.1| aminomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|167994785|ref|ZP_02575876.1| KamA family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168244887|ref|ZP_02669819.1| KamA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|194447368|ref|YP_002048381.1| KamA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197248033|ref|YP_002149252.1| KamA family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197263424|ref|ZP_03163498.1| KamA family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|16422895|gb|AAL23156.1| putative aminomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|194405672|gb|ACF65891.1| KamA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|197211736|gb|ACH49133.1| KamA family protein [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197241679|gb|EDY24299.1| KamA family protein [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|205327405|gb|EDZ14169.1| KamA family protein [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205336322|gb|EDZ23086.1| KamA family protein [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|261249429|emb|CBG27293.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267996666|gb|ACY91551.1| putative aminomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301160825|emb|CBW20356.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312915434|dbj|BAJ39408.1| KamA family protein [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|321223208|gb|EFX48278.1| Lysine 2,3-aminomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|323132674|gb|ADX20104.1| putative aminomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|332991147|gb|AEF10130.1| putative aminomutase [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 342 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKLRHVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|283834764|ref|ZP_06354505.1| KamA family protein [Citrobacter youngae ATCC 29220] gi|291069009|gb|EFE07118.1| KamA family protein [Citrobacter youngae ATCC 29220] Length = 342 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 165/319 (51%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + E++ ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLHLLNLDADEKLLAGRDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTAQQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVAEPGYSTDPL-EEQHSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YI ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQVALDYINAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L + + + H NH E E A+ RL AG+ LL+QSVLL+G Sbjct: 200 VIPARITEGLADRFAHSSLQILLVNHINHANEVDETFRQAMVRLRTAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|16763155|ref|NP_458772.1| hypothetical protein STY4693 [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29144634|ref|NP_807976.1| hypothetical protein t4385 [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213621858|ref|ZP_03374641.1| hypothetical protein SentesTyp_31779 [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213648405|ref|ZP_03378458.1| hypothetical protein SentesTy_14649 [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213865531|ref|ZP_03387650.1| hypothetical protein SentesT_37675 [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|25305130|pir||AH1045 conserved hypothetical protein yjeK [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16505463|emb|CAD06813.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29140273|gb|AAO71836.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 342 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|308273444|emb|CBX30046.1| L-lysine 2,3-aminomutase [uncultured Desulfobacterium sp.] Length = 359 Score = 405 bits (1042), Expect = e-111, Method: Composition-based stats. Identities = 130/342 (38%), Positives = 201/342 (58%), Gaps = 11/342 (3%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++T ++L + K +ID I +Y + + P +LI + N PI +Q +P +E Sbjct: 26 SITKPEELIRILPVDKSKIDRI---IEYYPMRINPYYFSLIK--HKNCPIGKQAVPDMQE 80 Query: 67 LNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 + + + DP+ + SP+ ++HRYP R+L + C +YCRFC R+ VG Sbjct: 81 IEDINILSDPDPLCEEIQSPVPNLIHRYPGRVLFMVSAECAMYCRFCMRKRKVGY---NS 137 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 ++ K L YI+ I EV+ +GGDPL+L +++ ++LK LR I H++ILR HSR+P Sbjct: 138 ITDKTITMGLEYIKNNKSICEVVISGGDPLLLEDEKIDRILKDLRAIDHIEILRIHSRIP 197 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 PQRI +L+ L++ P++I IH NHP E +EEA A S LA+AGI L Q+VLL Sbjct: 198 CTLPQRITKDLVDILRQY-HPLFINIHFNHPDEITEEAALACSALADAGIPLGCQTVLLN 256 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GIN++ EI+ LM+ + +R+KPYY+H D+ G HF+ T++EG I+ SL SGLC Sbjct: 257 GINNNAEIMKTLMKKLLMIRVKPYYIHQLDVVRGNHHFKATVKEGLNIMQSLYGY-SGLC 315 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y++DLPGG GKV + K + S ++ + + +Y Sbjct: 316 VPQYMIDLPGGGGKVPLLPQYFKTFSDDSISFINYEDKLFEY 357 >gi|24115503|ref|NP_710013.1| hypothetical protein SF4302 [Shigella flexneri 2a str. 301] gi|24054828|gb|AAN45720.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] Length = 342 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|311281298|ref|YP_003943529.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae SCF1] gi|308750493|gb|ADO50245.1| lysine 2,3-aminomutase YodO family protein [Enterobacter cloacae SCF1] Length = 342 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 160/303 (52%), Gaps = 3/303 (0%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 E + +E +++ + + NPNDP+ +Q I ++E P DP+ + Sbjct: 39 EDLLAGREAKRLFALRVPRAFVARMEKGNPNDPLLKQVITSQDEFVAAPGFSTDPL-EEQ 97 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 HS + G++H+Y +R LL + C V CR+CFRR ++ + ++ + ALAYI Sbjct: 98 HSVVPGLLHKYLNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQVALAYIAAHP 155 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+V P RI L + Sbjct: 156 ELDEIIFSGGDPLMAKDHELDWLISELEAIPHIKRLRIHSRLPVVIPARITGALAERFAR 215 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 + + + H NH E ++ AA+ L AG+ LL+QSVLL+G+ND+ + LANL Sbjct: 216 SSLQILLVNHINHAQEIDDDFRAAMKTLRQAGVTLLNQSVLLRGVNDNAQTLANLSNALF 275 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + + PYYLH D G +HF ++ +E + IV L ISG P ++ G K + Sbjct: 276 DAGVMPYYLHVLDKVQGAAHFMVSDDEARTIVRELLTLISGYMVPKLAREIGGEPSKTPL 335 Query: 323 DTH 325 D Sbjct: 336 DLQ 338 >gi|188496002|ref|ZP_03003272.1| KamA family protein [Escherichia coli 53638] gi|254037160|ref|ZP_04871237.1| KamA family protein [Escherichia sp. 1_1_43] gi|300949103|ref|ZP_07163147.1| KamA family protein [Escherichia coli MS 116-1] gi|300957803|ref|ZP_07169983.1| KamA family protein [Escherichia coli MS 175-1] gi|301646590|ref|ZP_07246457.1| KamA family protein [Escherichia coli MS 146-1] gi|307140841|ref|ZP_07500197.1| hypothetical protein EcolH7_22227 [Escherichia coli H736] gi|312974047|ref|ZP_07788218.1| kamA family protein [Escherichia coli 1827-70] gi|331644894|ref|ZP_08346011.1| putative radical SAM domain protein [Escherichia coli H736] gi|188491201|gb|EDU66304.1| KamA family protein [Escherichia coli 53638] gi|226840266|gb|EEH72268.1| KamA family protein [Escherichia sp. 1_1_43] gi|300315484|gb|EFJ65268.1| KamA family protein [Escherichia coli MS 175-1] gi|300451442|gb|EFK15062.1| KamA family protein [Escherichia coli MS 116-1] gi|301075207|gb|EFK90013.1| KamA family protein [Escherichia coli MS 146-1] gi|309704652|emb|CBJ04002.1| radical SAM superfamily protein [Escherichia coli ETEC H10407] gi|310331581|gb|EFP98837.1| kamA family protein [Escherichia coli 1827-70] gi|323935461|gb|EGB31799.1| KamA family protein [Escherichia coli E1520] gi|331035869|gb|EGI08107.1| putative radical SAM domain protein [Escherichia coli H736] Length = 342 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+ Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRD 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|238764091|ref|ZP_04625046.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii ATCC 33638] gi|238697762|gb|EEP90524.1| Uncharacterized kamA family protein yjeK [Yersinia kristensenii ATCC 33638] Length = 335 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 96/318 (30%), Positives = 164/318 (51%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L L+ + + + + + + + + P NP+DP+ Q + +EE Sbjct: 15 ITDPDELLRILLLNEHPNLQQGTAARRLFPLRVPRAFVSRMQPGNPSDPLLLQVLTAREE 74 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P +DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 75 FIAAPGFTDDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL Y+++ ++ E+IF+GGDPL+ L +L + I H++ LR H+R+P+ Sbjct: 132 NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWLLDEIESISHIKRLRIHTRLPV 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL Q L + V + H NH E ++++L AG+ LL+QSVLL+G Sbjct: 192 VIPARITTELCQRLSNSRLQVVMVTHINHANEIDASFRDSMAQLKQAGVTLLNQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +N+D E+LA L + I PYY+H D G +HF + +E ++++ L ++SG Sbjct: 252 VNNDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLRRVSGYLV 311 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 312 PRLTREVGGQPSKTPLDL 329 >gi|168263313|ref|ZP_02685286.1| KamA family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|205348035|gb|EDZ34666.1| KamA family protein [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] Length = 342 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLLAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWKVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|56416128|ref|YP_153203.1| hypothetical protein SPA4150 [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197365054|ref|YP_002144691.1| hypothetical protein SSPA3854 [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|56130385|gb|AAV79891.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|197096531|emb|CAR62140.1| conserved hypothetical protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] Length = 342 Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 171/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWTVALEYIAVHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFCLAMKKLHHVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|253690127|ref|YP_003019317.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251756705|gb|ACT14781.1| lysine 2,3-aminomutase YodO family protein [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 351 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 163/318 (51%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + ++ + + +++ + A + NP+DP+ Q + +EE Sbjct: 23 ITDPDELLQLLALNDHAKLRQGNDARRLFALRVPRAFAARMQKGNPDDPLLLQVLTAREE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + HS + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FTATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L ++ L +I H++ LR HSR+P+ Sbjct: 140 NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L L + V + H NHP E + A++RL AG+ LL+QSVLL+G Sbjct: 200 VIPARITDALCDRLSRSSLQVLLVTHINHPQEIDTDLTQAMARLRRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + LA L + I PYYLH D G +HF + E + +V +L +K+SG Sbjct: 260 VNDSADTLAQLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARILVKALLKKVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PRLAREIGGEASKTPLDL 337 >gi|29899154|gb|AAP03121.1| arginine aminomutase [Streptomyces griseochromogenes] Length = 410 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 113/346 (32%), Positives = 183/346 (52%), Gaps = 8/346 (2%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 +R + +T+ + I E + Y ++TP A+L++P +P P+ +Q Sbjct: 31 WHMRKR-ITNLDKAREWIRPTPLEEKAIAETAGKYRWSVTPYYASLMDPDDPGCPVRQQA 89 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EL DP+GD + +VH+YPDR+++ + CPVYCR C R+ Sbjct: 90 VPALGELMEFSGAEVDPVGDMYYRRTNRVVHKYPDRVIMLITEACPVYCRHCTRKFHTTD 149 Query: 121 QKGTVLSS---KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 GT +D L YI + +I +V+ TGGDPL +L++++ LR I V+I Sbjct: 150 VDGTYFERNEGEDFSEDLRYIADHPEIRDVLLTGGDPLSYRDGKLEEIIAGLRAIPSVEI 209 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R SR P++ PQR+ PEL + L PV++ H NHP E + E+ AI RL GI + Sbjct: 210 IRIGSRFPVLLPQRVTPELCEMLARY-HPVWLNTHFNHPKEITPESERAIDRLLRHGIPV 268 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+VLL+GINDD + LM + +R++PYYL+H D G SHF ++E+G +I+ L Sbjct: 269 GNQTVLLRGINDDLGTMRRLMTELLRIRVRPYYLYHCDNVTGVSHFMTSVEKGWEIMEGL 328 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 + I+G P Y+L GK+ + ++ +G + ++ Sbjct: 329 QGHITGFGVPQYVLTT--RLGKIPMVRPYYRETPDG-LVLRNYRGE 371 >gi|227113817|ref|ZP_03827473.1| hypothetical protein PcarbP_12668 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] Length = 335 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 103/325 (31%), Positives = 166/325 (51%), Gaps = 4/325 (1%) Query: 1 MQLRHKTLTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 MQ +T +L + ++ + + +++ + A + NP+DP+ Q Sbjct: 1 MQQLADVITDPDELLQLLALNDHAKLRQGSDARRLFALRVPRAFAARMQKGNPDDPLLLQ 60 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + +EE P DP+ + HS + G++H+Y +R LL + C V CR+CFRR Sbjct: 61 VLTAREEFIATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 119 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + AL YI++ ++ E+IF+GGDPL+ L ++ L +I H++ LR Sbjct: 120 QDNQG--NKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLR 177 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+P+V P RI L L + V + H NHP E + +++RL AG+ LL+ Sbjct: 178 IHSRLPVVIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRAGVTLLN 237 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+G+ND+ E LA L + I PYYLH D G +HF + E + +V +L + Sbjct: 238 QSVLLRGVNDNAETLARLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARILVKALLK 297 Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324 K+SG P ++ G K +D Sbjct: 298 KVSGYLVPRLAREIGGEASKTPLDL 322 >gi|227326240|ref|ZP_03830264.1| hypothetical protein PcarcW_02548 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 335 Score = 404 bits (1040), Expect = e-111, Method: Composition-based stats. Identities = 104/325 (32%), Positives = 167/325 (51%), Gaps = 4/325 (1%) Query: 1 MQLRHKTLTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 MQ +T +L + ++ + + +++ + A + NP+DP+ Q Sbjct: 1 MQQLADVITDPDELLQLLALNDHAKLRQGSDARRLFALRVPRAFAARMQKGNPDDPLLLQ 60 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + +EE P DP+ + HS + G++H+Y +R LL + C V CR+CFRR Sbjct: 61 VLTAREEFIATPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY 119 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + AL YI++ S++ E+IF+GGDPL+ L ++ L +I H++ LR Sbjct: 120 QDNQG--NKANWRQALDYIRQHSELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLR 177 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+P+V P RI L L + V + H NHP E + +++RL AG+ LL+ Sbjct: 178 IHSRLPVVIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRAGVTLLN 237 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+G+ND+ E LA L + I PYYLH D G +HF + E + +V +L + Sbjct: 238 QSVLLRGVNDNAETLARLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARVLVKALLK 297 Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324 K+SG P ++ G K +D Sbjct: 298 KVSGYLVPRLAREIGGEASKTPLDL 322 >gi|110808069|ref|YP_691589.1| hypothetical protein SFV_4304 [Shigella flexneri 5 str. 8401] gi|110617617|gb|ABF06284.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401] Length = 342 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKEHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 AIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|238912798|ref|ZP_04656635.1| KamA family protein [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 342 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 170/319 (53%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRAGQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G Sbjct: 200 VIPARITDELVARFDQSRLQILLVNHINHANEVDEAFGLAMKKLRHVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LANL + + PYYLH D G +HF +T +E ++I+ L +SG Sbjct: 260 VNDNARTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDLQ 338 >gi|183598065|ref|ZP_02959558.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827] gi|188022847|gb|EDU60887.1| hypothetical protein PROSTU_01424 [Providencia stuartii ATCC 25827] Length = 342 Score = 404 bits (1039), Expect = e-111, Method: Composition-based stats. Identities = 98/325 (30%), Positives = 169/325 (52%), Gaps = 4/325 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q + +T+ +L ++ Q + + + + + + + +P DP+ Q Sbjct: 17 QQLAEAITNPDELLQILGLESHQASKDGNDARKLFPLRVPRPFISRMKKGDPQDPLLLQV 76 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 + K E + P DP+ + N++ + ++H+Y +R L+ + C V CR+CFRR Sbjct: 77 LTAKAEFDTYPGFSTDPLDEQNNA-IPSLLHKYHNRALMLVKGGCAVNCRYCFRRHFPY- 134 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + A+ YI+ +++ E+IF+GGDPL+ L ++ L I H++ LR Sbjct: 135 -EDNKGNKNNWLIAVDYIKNHTELNEIIFSGGDPLMAKDSELDWLIGQLEAIPHIKRLRI 193 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 HSR+P+V P+RI L Q L + V + H NH E + AA+ +L NAG+ LL+Q Sbjct: 194 HSRLPVVIPERITTNLCQRLAHSRLQVIMVTHLNHANEIDDHFKAAMQKLKNAGVTLLNQ 253 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+G+N+D + LANL + I PYYLH D G +HF ++ +E + ++ L K Sbjct: 254 SVLLRGVNNDADTLANLSNALFDAGILPYYLHVLDKVQGAAHFLVSDQEARLLIQQLLGK 313 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325 +SG P ++ G K +D + Sbjct: 314 VSGYLVPKLAREIGGEPSKTLLDLN 338 >gi|119384403|ref|YP_915459.1| lysine 2,3-aminomutase YodO family protein [Paracoccus denitrificans PD1222] gi|119374170|gb|ABL69763.1| L-lysine 2,3-aminomutase [Paracoccus denitrificans PD1222] Length = 366 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 159/345 (46%), Positives = 216/345 (62%), Gaps = 4/345 (1%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L + +T+ L A L + + + +++ + I ++P + + P D IA QF+P Sbjct: 21 LSQRPITTVPALVEAGLADPARAEVLDKVAAEFRIRISPAMREAM--GAPGDGIAAQFVP 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 EL I PEE DPI D SP G+ HRYPDR++L + C VYCRFCFRRE+VG + Sbjct: 79 DARELQIRPEELADPISDAAFSPTPGLTHRYPDRVILHVTRTCEVYCRFCFRREVVGEEG 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 L D AAL Y+ I EVI TGGDP++LS +R+ ++ L I HV I+RFH+ Sbjct: 139 --TLPEPDLAAALDYVARTPAIHEVILTGGDPMVLSPRRIAALMARLEAIPHVDIVRFHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 RVP+V P RI+ ++ L V++ IH NH E + A AA++RLA+AGI LLSQ+V Sbjct: 197 RVPVVAPSRIDAAMLAALHPRRLAVWVVIHTNHAQELTAGARAALARLADAGIPLLSQTV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKG+N DPE+LA+L R + R+KPYYLHH DLA GT HFR TI EGQ I+A L+ ++S Sbjct: 257 LLKGVNADPEVLADLFRALIRNRVKPYYLHHCDLARGTGHFRTTIAEGQAIMAGLRGRLS 316 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 G C P Y+LDLPGG+GKV + ++K+ G G Y I D H+Y Sbjct: 317 GTCLPTYVLDLPGGHGKVPLGPDHVKETGPGRYLIRDWRGKDHEY 361 >gi|82546608|ref|YP_410555.1| hypothetical protein SBO_4310 [Shigella boydii Sb227] gi|187731271|ref|YP_001882838.1| KamA family protein [Shigella boydii CDC 3083-94] gi|81248019|gb|ABB68727.1| conserved hypothetical protein [Shigella boydii Sb227] gi|187428263|gb|ACD07537.1| KamA family protein [Shigella boydii CDC 3083-94] gi|320176659|gb|EFW51700.1| Lysine 2,3-aminomutase [Shigella dysenteriae CDC 74-1112] gi|320187554|gb|EFW62238.1| Lysine 2,3-aminomutase [Shigella flexneri CDC 796-83] gi|332087151|gb|EGI92285.1| kamA family protein [Shigella boydii 3594-74] Length = 349 Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats. Identities = 95/315 (30%), Positives = 163/315 (51%), Gaps = 4/315 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FVVASGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+ Sbjct: 200 VIPARITDALVERFSHSTLQILLVNHINHANEIDETFRQAMAKLRRVGVTLLNQSVLLRD 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVK 321 P ++ G K Sbjct: 320 PKLAREIGGEPSKTP 334 >gi|170766549|ref|ZP_02901002.1| KamA family protein [Escherichia albertii TW07627] gi|170123987|gb|EDS92918.1| KamA family protein [Escherichia albertii TW07627] gi|315617559|gb|EFU98165.1| kamA family protein [Escherichia coli 3431] Length = 342 Score = 403 bits (1037), Expect = e-110, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTDPDELLRLLKIDANEKLLAGRSAKKLFALRVPRSFIERMEKGNPDDPLLRQVLTSQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 YIAAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWKVALEYVAAHPELDEIIFSGGDPLMAKDHELDWLLTQLETIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ LL+QSVLL+G Sbjct: 200 VIPARITEALVERFARSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|307132783|ref|YP_003884799.1| lysine 2,3-aminomutase [Dickeya dadantii 3937] gi|306530312|gb|ADN00243.1| lysine 2,3-aminomutase [Dickeya dadantii 3937] Length = 347 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 101/328 (30%), Positives = 168/328 (51%), Gaps = 4/328 (1%) Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + Q+ ++ + + + A + P + DP+ Q + ++E Sbjct: 23 ITDPDELLRLLALDTHPQLSAGRDARKLFPLRVPRAFAARMRPGDARDPLLLQVLTAQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FIVTPGFSHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI+++ Q+ E+IF+GGDPL+ L +L L I H++ LR H+R+P+ Sbjct: 140 NKANWRQALDYIRQQPQLDEIIFSGGDPLMAKDHELDWLLNELEQIPHLKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL Q L ++ V + H NH E E +++RL AG+ LL+QSVLL+G Sbjct: 200 VIPARITAELCQRLAQSSLRVVLVTHINHANEIDAEFTDSMARLRRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LA L + I PYYLH D G +HF + +E + ++ L ++SG Sbjct: 260 VNDNADTLAALSNALFDAGILPYYLHVLDKVQGAAHFLVPDDEARALIRELMTQVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGS 334 P ++ G K +D ++ N + Sbjct: 320 PSLTREIGGEASKTLLDIGMPQRQENQN 347 >gi|238787518|ref|ZP_04631316.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii ATCC 33641] gi|238724305|gb|EEQ15947.1| Uncharacterized kamA family protein yjeK [Yersinia frederiksenii ATCC 33641] Length = 335 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 96/324 (29%), Positives = 166/324 (51%), Gaps = 4/324 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + + + + + + P NP+DP+ Q + +EE Sbjct: 15 ITDPDELLRILFLNEHPSLQQGSAARRLFPLRVPRAFVARMQPGNPSDPLLLQVLTAREE 74 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P +DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 75 FIAAPGFTDDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + AL YI++ ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+ Sbjct: 132 NKANWQQALDYIRQHPELDEIIFSGGDPLMAKDSELSWLVGELESITHIKRLRIHSRLPV 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI P L Q L ++ V + H NH E ++++L AG+ LL+QSVLL+G Sbjct: 192 VIPARITPALCQLLGDSRLQVLMVTHINHANEIDSSFRDSMAQLKRAGVTLLNQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +N+D ++LA L + I PYY+H D G +HF + +E ++++ L ++SG Sbjct: 252 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVNDDEARQLMKGLLSRVSGYLV 311 Query: 307 PFYILDLPGGYGKVKIDTHNIKKV 330 P ++ G K +D ++ Sbjct: 312 PRLAREIGGQPSKTPLDLRLMQSE 335 >gi|317493548|ref|ZP_07951969.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316918491|gb|EFV39829.1| KamA family protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 344 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 161/319 (50%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + + +++ + A + +PNDP+ Q + E Sbjct: 23 ITEPAELLEYLALSDSPEWQKGHDARRLFALRVPYAFARRMKKGDPNDPLLLQVMTSASE 82 Query: 67 LNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 P DP+ + + + + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FITTPGYSTDPLEEQDDAIAVPGLLHKYINRALLLVKGGCAVNCRYCFRRHFPYQDNQG- 141 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + + AL YI+++ ++ E+IF+GGDPL+ L +L + I H++ LR HSR+P Sbjct: 142 -NKANWRQALDYIRQQPELDEIIFSGGDPLMAKDHELAWLLDEIEAIPHIKRLRIHSRLP 200 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P RI L + ++ + + H NH E E A++RL +AG+ LL+Q VLL+ Sbjct: 201 VVIPARITETLTKRFSQSHLQILLVTHINHANEIDRELCDAMTRLKHAGVTLLNQGVLLR 260 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ + LA L + I PYYLH D G +HF ++ +E + I+ L K+SG Sbjct: 261 GVNDNADTLAALSNALFDAGIMPYYLHVLDRVQGAAHFMVSDDEARVIMRELMTKVSGYM 320 Query: 306 QPFYILDLPGGYGKVKIDT 324 P ++ G K ID Sbjct: 321 VPKLTREIGGEPSKTPIDL 339 >gi|332083734|gb|EGI88952.1| kamA family protein [Shigella dysenteriae 155-74] Length = 301 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 96/297 (32%), Positives = 160/297 (53%), Gaps = 3/297 (1%) Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88 + +++ + + + NP+DP+ RQ + ++E I P DP+ + HS + G Sbjct: 4 RNAKKLFALRVPRSFIDRMEKGNPDDPLLRQVLTSQDEFAIAPGFSTDPL-EEQHSVVPG 62 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 ++H+Y +R LL + C V CR+CFRR ++ + ++ + AL Y+ ++ E+I Sbjct: 63 LLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQTALEYVAAHPELDEMI 120 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 F+GGDPL+ L +L L I H++ LR HSR+PIV P RI L++ + + Sbjct: 121 FSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITEALVERFSHSTLQIL 180 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + H NH E E A+++L AG+ LL+QSVLL+G+ND+ + LANL + + P Sbjct: 181 LVNHINHANEIDETFRQAMAKLRRAGVTLLNQSVLLRGVNDNAQTLANLSNALFDAGVMP 240 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 YYLH D G +HF ++ +E ++I+ L +SG P ++ G K +D Sbjct: 241 YYLHVLDKVQGAAHFMVSDDEARQIMRELLTLVSGYLVPKLAREIGGEPSKTPLDLQ 297 >gi|331681166|ref|ZP_08381803.1| putative radical SAM domain protein [Escherichia coli H299] gi|331081387|gb|EGI52548.1| putative radical SAM domain protein [Escherichia coli H299] Length = 342 Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats. Identities = 98/319 (30%), Positives = 165/319 (51%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L I E++ + +++ + + NP+DP+ RQ + +EE Sbjct: 23 VTDPDELLRLLNIDADEKLLAGRSAKKLFALRVPRSFIERMEKGNPDDPLLRQVLTSQEE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 YIVAPGFSTDPL-EEQHSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL Y+ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PI Sbjct: 140 NKRNWQTALEYVAAHPELDEMIFSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L++ + + + H NH E E A+++L G+ L+QSVLL+G Sbjct: 200 VIPARITDALVERFAHSTLQILLVNHINHANEVDETFRQAMAKLRRVGVTQLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + LANL + + PYYLH D G +HF ++ +E ++I+ L +SG Sbjct: 260 VNDNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFVVSDDEARQIMRELLTLVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|295098305|emb|CBK87395.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length = 342 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 100/303 (33%), Positives = 162/303 (53%), Gaps = 3/303 (0%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 E + +E +++ + + NP DP+ +Q + ++E P DP+ + Sbjct: 39 EALRAGREAKRLFALRVPRAFVARMEKGNPGDPLLKQTLTSQDEFITAPGYSTDPL-EEQ 97 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 +S + G++H+Y +R LL + C V CR+CFRR ++ + ++ + AL YI Sbjct: 98 NSVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQVALDYIAAHP 155 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 ++ E+IF+GGDPL+ L +L L I H++ LR HSR+PIV P RI L+ L++ Sbjct: 156 ELDEIIFSGGDPLMAKDHELDWLLTQLETIPHIKRLRIHSRLPIVIPARITDALVTRLEQ 215 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 + V + H NH E + AA++R+ AG+ LL+QSVLL+G+ND +LA+L Sbjct: 216 SRLQVLLVNHINHANEIDADFRAAMARMRKAGVTLLNQSVLLRGVNDSARVLADLSNALF 275 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + + PYYLH D G +HF +T EE +KI+ L +SG P ++ G K + Sbjct: 276 DAGVMPYYLHVLDRVQGAAHFMVTDEEARKIMRELLTLVSGYMVPKLAREIGGEPSKTPL 335 Query: 323 DTH 325 D Sbjct: 336 DLQ 338 >gi|28899620|ref|NP_799225.1| hypothetical protein VP2846 [Vibrio parahaemolyticus RIMD 2210633] gi|260364033|ref|ZP_05776761.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030] gi|260876639|ref|ZP_05888994.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034] gi|260898079|ref|ZP_05906575.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466] gi|260902332|ref|ZP_05910727.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037] gi|28807872|dbj|BAC61109.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] gi|308085822|gb|EFO35517.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus Peru-466] gi|308093973|gb|EFO43668.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AN-5034] gi|308110956|gb|EFO48496.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ4037] gi|308114570|gb|EFO52110.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus K5030] Length = 340 Score = 402 bits (1035), Expect = e-110, Method: Composition-based stats. Identities = 98/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P +E + DP+ + + + G++H+Y +R+L+ + C V CR+CFRR + Sbjct: 78 PLSDEFEVHAGYSNDPLDEQ-DNAIPGLLHKYKNRVLMIVKGGCAVNCRYCFRRHFPYQE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + + Y+ EK ++ EVIF+GGDPL+ + +L+ + I H++ LR H Sbjct: 137 NKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIAKIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL Q LK + + + H NH E ++E A+ +L A + LL+Q Sbjct: 195 SRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKLKEANVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + L+ L + I PYYLH D G +HF + E ++++A L E + Sbjct: 255 VLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERARQLMAGLLENV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLIPTLTREIGGRKSKTPLDLH 338 >gi|85858714|ref|YP_460916.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB] gi|85721805|gb|ABC76748.1| L-lysine 2,3-aminomutase [Syntrophus aciditrophicus SB] Length = 339 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 111/332 (33%), Positives = 176/332 (53%), Gaps = 5/332 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+R++ + S + L ++ + Y ++TP +LI +P+DPI Q Sbjct: 11 WQVRNR-IRSGRQLAELLKEAPIAAGSLRAVIRTYPFSITPYYFSLIREGDPDDPIRFQC 69 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E++ +DP+ ++ P+ G++HRY DR L+ C +YCR C R+ Sbjct: 70 VPDPREVSFSLGGVDDPLEESRDMPVPGLIHRYADRCLIMATSKCMMYCRHCNRKRRW-- 127 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 K A + Y+ I EVI +GGDPL L K L + L LR I HV++LR Sbjct: 128 -KAGAADRAPLRAMIDYVAATPGIREVIVSGGDPLTLPEKVLDEFLGALRAIPHVEVLRI 186 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P+V P RI L++ L++ P++ N P E + E+ A RL +AGI + +Q Sbjct: 187 GSRIPVVLPMRITVPLVRILRKHR-PLWFNTQFNSPREITPESAEACERLVDAGIPVSNQ 245 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLLKGINDD E + L+ + ++PYYL D G HFR+ +G +++ + + Sbjct: 246 SVLLKGINDDYETMRRLLYGLQRISVRPYYLFQCDPVRGADHFRVDFWKGMEMMERISRQ 305 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332 SGLC P Y++D+PGG GK+ + T ++ + Sbjct: 306 TSGLCLPRYVIDVPGGKGKMSLQTFSLLADSD 337 >gi|332994506|gb|AEF04561.1| lysine 2,3-aminomutase YodO family protein [Alteromonas sp. SN2] Length = 341 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 166/319 (52%), Gaps = 3/319 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + TS + L + + + ++ + + + + A+L+ NPNDP+ Q +P K+E Sbjct: 23 SFTSPEKLLSFLDLPSKDYEQDSKARRLFPMRVPRHFASLMEKGNPNDPLFLQVMPLKQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 +I P +DP+ + + + KG++H+Y R+LL + C V CR+CFRR + + Sbjct: 83 FSIEPGYTKDPL-EEHDTAGKGLLHKYDSRVLLMVRTGCAVNCRYCFRRHFPYA--DNAV 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI I EVIF+GGDPL+ L + K + I H++ LR H+R+P+ Sbjct: 140 NKAQWQEALDYIAGNPAINEVIFSGGDPLMAKDDHLAALAKEIAAIPHIKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+R++ + + +HANH E S + + +L G+ LL+QSVLLK Sbjct: 200 VLPERLDNAFFDWFTQLPIQKILVLHANHSNEVSPALKSRLEKLRTHGVTLLNQSVLLKD 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + + L + + PYYLH D G SHF ++ ++ ++I+ +++ G Sbjct: 260 VNDSADAVCELSERLFDAGVMPYYLHVLDKVEGASHFYVSDDKARQIMQEAIKRLPGFLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P + ++ GK ID H Sbjct: 320 PKLVREIGAQPGKTPIDLH 338 >gi|50122897|ref|YP_052064.1| hypothetical protein ECA3977 [Pectobacterium atrosepticum SCRI1043] gi|49613423|emb|CAG76874.1| conserved hypothetical protein [Pectobacterium atrosepticum SCRI1043] Length = 347 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 99/318 (31%), Positives = 163/318 (51%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + ++ + + +++ + A + NP+DP+ Q + + E Sbjct: 23 ITDPDELLQLLALNDHAKLRQGNDARRLFALRVPRAFAARMQKGNPDDPLLLQVLTARAE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FIVTPGFTHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L ++ L +I H++ LR HSR+P+ Sbjct: 140 NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELDWLITELEHIPHLKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L L + V + H NHP E + +++RL +G+ LL+QSVLL+G Sbjct: 200 VIPARITDALCDRLSRSSLQVLLVTHINHPQEIDPDLTQSMARLRRSGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND E LA L + I PYYLH D G +HF + E + +V +L +K+SG Sbjct: 260 VNDSAETLARLSNALFDAGILPYYLHVLDKVQGAAHFLVDDNEARVLVKALMKKVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PRLAREIGGEASKTPLDL 337 >gi|146279243|ref|YP_001169401.1| hypothetical protein Rsph17025_3212 [Rhodobacter sphaeroides ATCC 17025] gi|145557484|gb|ABP72096.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17025] Length = 340 Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats. Identities = 150/342 (43%), Positives = 215/342 (62%), Gaps = 8/342 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + L S DL L+ + + + E++ + I +T + + + +ARQF+P + Sbjct: 3 RALDSLDDLATLGLVDPAE-ERLAEVARAFRIRVT----SQMAAAAADPAVARQFVPTVD 57 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL I PEE DPIGD SP+ G+ HRY DR++L + C VYCRFCFRRE+VGS+ + Sbjct: 58 ELEIRPEELADPIGDEARSPVPGLTHRYTDRVILHVTRTCDVYCRFCFRREVVGSEG--L 115 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS D AAL YI+ + EVI TGGDPL LS +RL+ +++ L I H+ +R HSRVP Sbjct: 116 LSDADLTAALDYIEATPAVREVILTGGDPLTLSPRRLRGIIERLGQIAHLDQVRIHSRVP 175 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V PQR++ ++I+ L PV+I +H NH E +A AA+ RLA+ G+ LLSQSVLL+ Sbjct: 176 VVAPQRVDEDMIRALL-GPVPVWIVVHVNHAAELRLDARAALGRLADRGVPLLSQSVLLR 234 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND + L L R + LR+KPYYLHH DLA G HFR +I +G+ I+A L+ +I+G+ Sbjct: 235 GVNDSADTLEALFRALLRLRVKPYYLHHCDLARGAGHFRTSIAQGRAIMAELRRRITGIG 294 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LD+PGG+GKV + ++ G G + + D VH Y Sbjct: 295 LPTYVLDIPGGFGKVPVTPDHVIPDGPGRWQVRDPQGGVHRY 336 >gi|308189049|ref|YP_003933180.1| hypothetical protein Pvag_3613 [Pantoea vagans C9-1] gi|308059559|gb|ADO11731.1| Uncharacterized kamA family protein [Pantoea vagans C9-1] Length = 342 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 167/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + ++ E + +++ + + + +DP+ Q + +++E Sbjct: 23 VTEPDELLRILALDQHTELAEGADARRLFALRVPHAFIRRMKKGDAHDPLLLQVLTRRQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + + + + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FIDAPGYSTDPLDEQS-NVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNPG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + +AAL YI + ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+ Sbjct: 140 NKRSWQAALDYIADHPELDEIIFSGGDPLMAKDHELAWLIAALEKIPHLKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI +L Q L E V + H NH E +E A+S L AG+ LL+QSVLL+G Sbjct: 200 VIPARITDQLCQMLSETRLQVLMVTHINHAQEIDDELREAMSSLKRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND+ + LA L + I PYYLH D G +HF ++ EE +++V +L ++SG Sbjct: 260 INDNSQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEARQLVRALLSQVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|271502194|ref|YP_003335220.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii Ech586] gi|270345749|gb|ACZ78514.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii Ech586] Length = 345 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 103/317 (32%), Positives = 163/317 (51%), Gaps = 4/317 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + K Q+ +E + + + + A + P + DP+ Q + K+E Sbjct: 23 ITDPDELLRLLALDKHPQLTAGREARSLFPLRVPRAFAARMRPGDARDPLLLQVLTAKDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P +DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FITAPGFSQDPLDEQQ-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ Q+ E+IF+GGDPL+ L +L L I H++ LR H+R+P+ Sbjct: 140 NKANWRQALDYIRQHPQLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL Q L ++ V + H NH E + E +++RL AG+ LL+QSVLL+G Sbjct: 200 VIPARITAELCQRLAQSPLQVVLVTHINHANEINAELTDSMARLRRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND + L L + I PYYLH D G +HF + +E + +V L ++SG Sbjct: 260 INDRVDTLVALSNALFDAGILPYYLHVLDKVQGAAHFLVPDDEARTLVRGLMTQVSGYLV 319 Query: 307 PFYILDLPGGYGKVKID 323 P ++ G K +D Sbjct: 320 PNLTREIGGEASKTLLD 336 >gi|162146333|ref|YP_001600792.1| L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus PAl 5] gi|209543664|ref|YP_002275893.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter diazotrophicus PAl 5] gi|161784908|emb|CAP54451.1| putative L-lysine 2,3-aminomutase [Gluconacetobacter diazotrophicus PAl 5] gi|209531341|gb|ACI51278.1| lysine 2,3-aminomutase YodO family protein [Gluconacetobacter diazotrophicus PAl 5] Length = 382 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 149/344 (43%), Positives = 203/344 (59%), Gaps = 8/344 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +T+ L A L+ + ++E++ Y+ A+ P A LI P+DPI Q +P Sbjct: 26 RTVRDVAGLVAAGLVSPGAVPALEEVARQYATAIPPAFAGLITR--PDDPIGLQVVPDAS 83 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL I P ER DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G V Sbjct: 84 ELTIAPHERMDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGPDGG-V 142 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L E AL +++ I EVI TGGDPL+LS +RL +++ L + HV +R HSRVP Sbjct: 143 LDDAALERALDWLRTHPAIREVILTGGDPLMLSPRRLGAIVRALGDMPHVTTIRIHSRVP 202 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP RI L + E + +++ +HANH EF+ A AA+ R+ I +L QSVLL+ Sbjct: 203 VADPGRITDALADAM-ETDRAMWVVVHANHAREFTPAARAALRRIQARAIPVLGQSVLLR 261 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND L L R VE R+KPYYLH D A GT+ F + I EG++++A L+ +++GL Sbjct: 262 GVNDSVAALEALFRAMVEARMKPYYLHQLDAAPGTARFHVPIAEGRRLLAGLRGRVTGLA 321 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGN----GSYCITDHHNIVH 345 P Y LD+PGGYGKV + ++ G + D H Sbjct: 322 WPTYTLDIPGGYGKVPLGPDYLEPEGPAPDGTGLSVRDPAGGRH 365 >gi|58038709|ref|YP_190673.1| lysine 2,3-aminomutase [Gluconobacter oxydans 621H] gi|58001123|gb|AAW60017.1| Lysine 2,3-aminomutase [Gluconobacter oxydans 621H] Length = 356 Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats. Identities = 146/336 (43%), Positives = 212/336 (63%), Gaps = 4/336 (1%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 + TL + DL +A L + ++ + +++A+ P +LI +P+DPIARQ IP Sbjct: 18 KRHTLRTPSDLIDAGLATEADRATLEAVGERFTMAIPPAFRDLI--THPDDPIARQVIPD 75 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 EL LP E DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G Sbjct: 76 ARELVTLPHEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGP-GG 134 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 +LS+ E AL ++++ I E+I TGGDPL+L+ +RL+ ++++L I H++ +R HSR Sbjct: 135 GLLSNAQLETALDWVRQHPDIREIILTGGDPLMLAPRRLKHIVQSLSGIPHIETIRIHSR 194 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+ DP R+ EL+ + E + +++ IHANH E + A AI + + I +LSQSVL Sbjct: 195 VPVADPARMTEELLDAM-ETDRAMWLVIHANHASELTPHATKAIRAVLSRAIPVLSQSVL 253 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+ND E L L+R ++ R+KPYYLHH D AAGT HF + + +GQ ++ L+ +++G Sbjct: 254 LRGVNDTVESLEALLRALIKARVKPYYLHHLDAAAGTGHFHVPVAQGQALLRQLRGRVTG 313 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339 L P Y+LD+P G GKV I + G+ D Sbjct: 314 LAWPTYVLDIPSGRGKVPIGPEYLDPASPGTVSTPD 349 >gi|328472254|gb|EGF43124.1| lysine 2,3-aminomutase [Vibrio parahaemolyticus 10329] Length = 340 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 98/324 (30%), Positives = 162/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P +E + DP+ + + + G++H+Y +R+L+ + C V CR+CFRR + Sbjct: 78 PLSDEFEVHAGYSNDPLDEQ-DNAIPGLLHKYKNRVLMIVKGGCAVNCRYCFRRHFPYQE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + + Y+ EK ++ EVIF+GGDPL+ + +L+ + I H++ LR H Sbjct: 137 NKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIAQIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL Q LK + + + H NH E ++E A+ +L A + LL+Q Sbjct: 195 SRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKLKEANVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + L L + I PYYLH D G +HF + E ++++A L E + Sbjct: 255 VLLKGVNDSVDALIQLSEALFDAGIMPYYLHVLDKVQGAAHFMVDDERARQLMAGLLENV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLIPTLTREIGGRKSKTPLDLH 338 >gi|91228408|ref|ZP_01262334.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01] gi|254230273|ref|ZP_04923663.1| lysine 2;3-aminomutase [Vibrio sp. Ex25] gi|262393005|ref|YP_003284859.1| lysine 2,3-aminomutase [Vibrio sp. Ex25] gi|269966836|ref|ZP_06180909.1| conserved hypothetical protein [Vibrio alginolyticus 40B] gi|91188049|gb|EAS74355.1| hypothetical protein V12G01_15225 [Vibrio alginolyticus 12G01] gi|151937210|gb|EDN56078.1| lysine 2;3-aminomutase [Vibrio sp. Ex25] gi|262336599|gb|ACY50394.1| lysine 2,3-aminomutase [Vibrio sp. Ex25] gi|269828503|gb|EEZ82764.1| conserved hypothetical protein [Vibrio alginolyticus 40B] Length = 340 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 95/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P +E + P DP+ + + + G++H+Y +R L+ + C V CR+CFRR + Sbjct: 78 PLSDEFEVHPGYSNDPL-EEQDNEVPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + +I H++ LR H Sbjct: 137 NKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAHIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P R+ EL Q L+ + + + H NH E ++E + +L AG+ LL+Q Sbjct: 195 SRLPVVIPARVTDELCQLLQASRLQIILVTHINHANEINDEFAEQMFKLKRAGVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND E L + I PYYLH D G +H+ ++ EE + I+ L ++ Sbjct: 255 VLLKGVNDSVEAQVALSEALFDAGILPYYLHVLDKVQGAAHYFISDEEAKAIMRGLITRV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|238796052|ref|ZP_04639563.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC 43969] gi|238719997|gb|EEQ11802.1| Uncharacterized kamA family protein yjeK [Yersinia mollaretii ATCC 43969] Length = 335 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 95/324 (29%), Positives = 164/324 (50%), Gaps = 4/324 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + + + + + + P +P+DP+ Q + +EE Sbjct: 15 ITDPDELLRILFLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGDPSDPLLLQVLTAREE 74 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 75 FIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR H+R+P+ Sbjct: 132 NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWLLDELESISHIKRLRIHTRLPV 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L ++ V + H NH E + ++++L AG+ LL+QSVLL+G Sbjct: 192 VIPARITAALCQRLGDSRLQVLMVTHINHTNEIDQSLRDSMAQLKQAGVTLLNQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD ++LA L + I PYY+H D G +HF + +E ++++ L ++SG Sbjct: 252 VNDDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311 Query: 307 PFYILDLPGGYGKVKIDTHNIKKV 330 P ++ G K +D ++ Sbjct: 312 PRLAREIGGQPSKTPLDLRLMQSE 335 >gi|221369244|ref|YP_002520340.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131] gi|221162296|gb|ACM03267.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides KD131] Length = 345 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 158/343 (46%), Positives = 219/343 (63%), Gaps = 10/343 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64 + L S +DL +A L + + ++E++ + I LTP + +DP +ARQF+P Sbjct: 8 RALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 61 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 +EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+ Sbjct: 62 DELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 119 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 +L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV Sbjct: 120 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 179 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL Sbjct: 180 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 238 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +G+ND E L +L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+ Sbjct: 239 RGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRITGI 298 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LDLPGG+GKV + ++ G G + + D +H Y Sbjct: 299 GLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPY 341 >gi|149922522|ref|ZP_01910953.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1] gi|149816630|gb|EDM76124.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1] Length = 316 Score = 401 bits (1032), Expect = e-110, Method: Composition-based stats. Identities = 136/311 (43%), Positives = 190/311 (61%), Gaps = 3/311 (0%) Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98 + + I+ +P+DPI RQ +P EL LP ER DPIGD HSP+ + HRYP R L Sbjct: 1 MPQSYLDKIDWQDPDDPIRRQAVPSPLELESLPGERPDPIGDAAHSPVPRLTHRYPTRAL 60 Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L +VC +YCR CFR+E + + S E ALAY+ E +++ EVI TGGDPL LS Sbjct: 61 LYPTYVCSMYCRHCFRKESINDEAAG-FSMAALEPALAYLAEHTELREVILTGGDPLTLS 119 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPY 217 +L+ + L I+H+ +LR H+RVP+ P R+ P L+ L+ + + V + H NHP Sbjct: 120 DVQLEALRSRLDAIEHLSLLRVHTRVPVTLPTRVTPGLVAALRGDGSRMVCVVTHFNHPR 179 Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV-ELRIKPYYLHHPDL 276 E ++A+ A RL AG +LL+QSVLL+G+ND+ E+LA L V KPYYLHH DL Sbjct: 180 ELDDDALTACRRLREAGFMLLNQSVLLRGVNDEVEVLAELFEKLVYRAGAKPYYLHHCDL 239 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336 G SHFR +I+ G++++A+L+ +ISGLC P Y+LDLPGG GKV I + +C Sbjct: 240 TRGVSHFRTSIDRGRELMAALRGRISGLCLPEYVLDLPGGDGKVPIGPSFVHARDGQRWC 299 Query: 337 ITDHHNIVHDY 347 + +H Y Sbjct: 300 FSTWAGGLHHY 310 >gi|261342808|ref|ZP_05970666.1| KamA family protein [Enterobacter cancerogenus ATCC 35316] gi|288314849|gb|EFC53787.1| KamA family protein [Enterobacter cancerogenus ATCC 35316] Length = 342 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 101/297 (34%), Positives = 160/297 (53%), Gaps = 3/297 (1%) Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88 +E +++ + + NP+DP+ +Q + ++E P DP+ + +S + G Sbjct: 45 REAKRLFALRVPRAFVARMEKGNPDDPLLKQTLTSQDEFVTAPGYSTDPL-EEQNSVVPG 103 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 ++H+Y +R LL + C V CR+CFRR + + ++ + AL YI ++ E+I Sbjct: 104 LLHKYLNRALLLVKGGCAVNCRYCFRRHFPYADNQG--NKRNWQVALDYIAAHPELDEII 161 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 F+GGDPL+ L +L L I H++ LR HSR+PIV P RI L+ L ++ V Sbjct: 162 FSGGDPLMAKDHELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDGLVSRLAQSRLQVL 221 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + H NH E +E AA+ RL AG+ LL+QSVLL+G+ND+ +LA+L + + P Sbjct: 222 LVNHINHANEIDDEFRAAMIRLRQAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMP 281 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 YYLH D G +HF +T EE ++IV L +SG P ++ G K +D Sbjct: 282 YYLHVLDRVQGAAHFMVTDEEARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLDLQ 338 >gi|269137690|ref|YP_003294390.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202] gi|267983351|gb|ACY83180.1| hypothetical protein ETAE_0333 [Edwardsiella tarda EIB202] gi|304557746|gb|ADM40410.1| hypothetical protein ETAF_0286 [Edwardsiella tarda FL6-60] Length = 342 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 100/315 (31%), Positives = 159/315 (50%), Gaps = 3/315 (0%) Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70 A L L Q E + + + + I +PNDP+ RQ + E Sbjct: 27 ADLLAQLGLSDHPQWLAGCEARRLFPLRVPRAFISRIRRGDPNDPLLRQVMSDAAEFIET 86 Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 P DP+ + HS + G++H+Y +R LL + C V CR+CFRR + + + Sbjct: 87 PGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYQENQG--TRAN 143 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + A+AY+ E ++ E+IF+GGDPL+ L + L + H++ LR HSR+P+V P Sbjct: 144 WQRAVAYLHEHPELDEIIFSGGDPLMAKDHELDWLFTQLEQLPHLRRLRIHSRLPVVIPA 203 Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 R+ L Q + ++ + + H NH E E A+ RL AG+ LL+QSVLL+G+ND Sbjct: 204 RVTDALCQRMADSRLQMVLVTHINHANEIDEALSEAMGRLKQAGVTLLNQSVLLRGVNDS 263 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 + LA L + I PYYLH D G +HF + +E ++++ L ++SG P Sbjct: 264 ADTLAALSNALFDAGILPYYLHVLDKVQGGAHFMVPDDEARRLMHGLLAQVSGYLVPRLT 323 Query: 311 LDLPGGYGKVKIDTH 325 ++ G K ++D H Sbjct: 324 REIGGEPSKTQLDLH 338 >gi|304396296|ref|ZP_07378177.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB] gi|304355805|gb|EFM20171.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. aB] Length = 327 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 101/326 (30%), Positives = 168/326 (51%), Gaps = 4/326 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 MQ +T +L + + ++ E + +++ + + + +DP+ Q Sbjct: 1 MQQLADVVTEPDELLRILALDQHTELAEGADARRLFALRVPHAFIRRMKKGDAHDPLLLQ 60 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + +++E P DP+ + + + + G++H+Y +R LL + C V CR+CFRR Sbjct: 61 VLTRRQEFIDAPGYSTDPLDEQS-NVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY 119 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + +AAL YI E ++ E+IF+GGDPL+ L ++ L I H++ LR Sbjct: 120 QDNPG--NKRSWQAALDYIAEHPELDEIIFSGGDPLMAKDHELAWLIAALEQIPHLKRLR 177 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+P+V P RI +L Q L + V + H NH E E ++ RL AG+ LL+ Sbjct: 178 IHSRLPVVIPARITEQLCQMLSDTRLQVIMVTHINHAQEIDEALRESMIRLKRAGVTLLN 237 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+GIND+ + LA L + I PYYLH D G +HF ++ +E +++V SL Sbjct: 238 QSVLLRGINDNAQTLATLSNALFDAGILPYYLHVLDKVQGAAHFFVSDDEARQLVRSLLS 297 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325 ++SG P ++ G K +D Sbjct: 298 QVSGYLVPKLAREIGGEPSKTPLDLQ 323 >gi|189425162|ref|YP_001952339.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ] gi|189421421|gb|ACD95819.1| lysine 2,3-aminomutase YodO family protein [Geobacter lovleyi SZ] Length = 341 Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats. Identities = 122/320 (38%), Positives = 187/320 (58%), Gaps = 8/320 (2%) Query: 28 IKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLK 87 +K +++ Y ++ A LI P+DPI +Q +P EL + DP+ + SP+ Sbjct: 22 LKPVADLYPYRISSYYAGLI--TAPHDPIWQQCVPSLLELVDTEQHP-DPLDEERLSPVP 78 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 G++HRYPDR +L + + C YCRFC R+ VG G AAL YI Q+ ++ Sbjct: 79 GLIHRYPDRAVLLVSNRCATYCRFCMRKRRVGCAGGQPA----LSAALEYIAATPQLRDI 134 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 I +GGDPL+LS L ++L LR I HV+++R SR+P+ P RI P + L E P+ Sbjct: 135 ILSGGDPLMLSDDELHEILLALRRIPHVEVIRIGSRMPVTAPARITPAFCRMLAEH-HPL 193 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 Y+ H NHP E + EA A LA+ G+ L +Q+VLLKG+NDD + L+ + L+++ Sbjct: 194 YLNTHFNHPQELTSEAAQACRLLASVGVPLGNQTVLLKGVNDDSPTMQALLTGLLRLQVR 253 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327 PYYLH DL GT+HFR +E G++++ +L+ KISG+ P +++DLPGG GKV + ++ Sbjct: 254 PYYLHQMDLVRGTAHFRTPLEHGRQLIGALRGKISGMAIPHFVIDLPGGKGKVPVLPDSL 313 Query: 328 KKVGNGSYCITDHHNIVHDY 347 +VG + + +Y Sbjct: 314 TRVGEAVWQVQTSSGETINY 333 >gi|332560846|ref|ZP_08415164.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N] gi|332274644|gb|EGJ19960.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides WS8N] Length = 340 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 158/343 (46%), Positives = 219/343 (63%), Gaps = 10/343 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64 + L S +DL +A L + + ++E++ + I LTP + +DP +ARQF+P Sbjct: 3 RALESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 +EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+ Sbjct: 57 DELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 +L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL Sbjct: 175 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +G+ND E L +L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+ Sbjct: 234 RGVNDTVETLEDLFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMAELRRRITGI 293 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LDLPGG+GKV + ++ G G + + D +H Y Sbjct: 294 GLPSYVLDLPGGFGKVPLTHDHLIAEGPGRWQVRDPQGGLHPY 336 >gi|327396208|dbj|BAK13630.1| lysine 2 3-aminomutase YjeK [Pantoea ananatis AJ13355] Length = 342 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + +++ + + + DP+ Q + ++E Sbjct: 23 VTDPHELLQLLALDHHPDLAAGGDARRLFALRVPRAFIRRMKKGDAQDPLLLQVLTSRQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + N S + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ +AAL YI ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+ Sbjct: 140 NKRNWQAALDYIAAHPELDEIIFSGGDPLMAKDHELAWLIDALGAIPHLKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L E V + H NH E E A+ RL A + LL+QSVLL+G Sbjct: 200 VIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLRLKRADVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD + LA L + I PYYLH D G +HF ++ EE + ++ SL ++SG Sbjct: 260 VNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEARALMRSLLPRVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|300723094|ref|YP_003712392.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061] gi|297629609|emb|CBJ90212.1| Arginine aminomutase [Xenorhabdus nematophila ATCC 19061] Length = 392 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 124/356 (34%), Positives = 197/356 (55%), Gaps = 12/356 (3%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QLR+ + +++DL + + I+ + Y TP A+L++ ++ N PI Q I Sbjct: 19 QLRN-LIKTSEDLEKWIALTDNEKKAIEAVKGKYLWQSTPYYASLMDKYDANCPIRLQTI 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E+ I DP+GD ++ ++H+YP+RI+L + CPVYCR C R+ Sbjct: 78 PHLREMKIETNSDNDPVGDTSNLKTARVIHKYPNRIVLLVSDTCPVYCRHCTRKFHTTDV 137 Query: 122 KGTVLSSK---DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 +GT S E AYI+ +I +V+ TGGDPLI K L+ ++K LR IKH+ I+ Sbjct: 138 EGTYFGSDLAASYEEDFAYIESHPEIDDVLLTGGDPLIHYDKFLEVIIKRLRSIKHINII 197 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R SR P+ PQRI + Q L++ P+++ H NHP E +EEA A RL GI + Sbjct: 198 RIGSRYPVFAPQRITEKFCQMLEKY-HPIWVNTHFNHPKEVTEEAATACDRLLRHGIPVQ 256 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +QSVLLKGINDD E + +L++ + +R++PYYL+H D +G SHF T+E+G++I+ ++ Sbjct: 257 NQSVLLKGINDDVETMRSLLKALLRIRVRPYYLYHCDNVSGVSHFMTTLEKGKEIMDAMV 316 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI---VHDY--PP 349 +G P Y++ GK+ ++ + +G ++ V +Y PP Sbjct: 317 GFETGFSVPQYVVTT--TLGKLAVNREYVITQEDGRIIGRNYKKESLDVTEYIKPP 370 >gi|123440740|ref|YP_001004732.1| hypothetical protein YE0356 [Yersinia enterocolitica subsp. enterocolitica 8081] gi|122087701|emb|CAL10486.1| conserved hypothetical protein [Yersinia enterocolitica subsp. enterocolitica 8081] Length = 345 Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats. Identities = 96/318 (30%), Positives = 162/318 (50%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + + + + + + P NP+DP+ Q + +EE Sbjct: 23 ITDPDELLRILQLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQVLTAREE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL Y+++ ++ E+IF+GGDPL+ L +L + I H++ LR H+R+P+ Sbjct: 140 NKANWRQALDYVRQHPELDEIIFSGGDPLMAKDSELSWLLDEIENISHIKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL Q L ++ V + H NH E ++++L AG+ LL+QSVLL+G Sbjct: 200 VIPARITAELCQRLSDSRLQVLMVTHINHANEIDASFRDSMAQLKRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD E+LA L + I PYY+H D G +HF + +E ++++ L ++SG Sbjct: 260 VNDDDEVLAALSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PRLAREIGGQPSKTPLDL 337 >gi|225847898|ref|YP_002728061.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense Az-Fu1] gi|225643772|gb|ACN98822.1| L-lysine 2,3-aminomutase (KAM) (LAM) [Sulfurihydrogenibium azorense Az-Fu1] Length = 374 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 117/346 (33%), Positives = 193/346 (55%), Gaps = 8/346 (2%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ L + +D+ + D K++S Y TP L + N DPI +Q Sbjct: 28 WQIKNR-LKTLEDIKKI--LPNVNEDVFKKVSQIYHFGTTPYYIFLADRTNLEDPILKQI 84 Query: 61 IPQKEELNILPEERE--DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 +P ++E++ +E DP ++ SP+ G+ HRYPDR+L + + C VYCR C R+ M Sbjct: 85 LPDEKEIDEKYQEGAFLDPFLEDEKSPVLGLTHRYPDRVLFRATNFCSVYCRHCMRKRMF 144 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + ++ + YI+ I EV+ +GGDPL L +++++ ++K L I HV I+ Sbjct: 145 -LEDERARTKQEYDVMFEYIKSNKAIKEVLVSGGDPLTLPNQKIEYIIKNLYEIDHVDII 203 Query: 179 RFHSRVPIVDPQRI-NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 R SR + +P R + EL++ ++ K V+I H NHP E + E A+ + + G + Sbjct: 204 RIGSRELVSNPFRFYDEELLEIFEKYDK-VWIVTHFNHPNEITSETKKAVKNILSTGTPV 262 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 L+Q+VLLKGINDD + NLMR+ ++++IKPYYL H D G HF+ IE+G +I+ L Sbjct: 263 LNQTVLLKGINDDKYTMENLMRSLLKVKIKPYYLFHCDPTKGVYHFKTGIEKGLEIMEHL 322 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 + ++SGL P + +DL G GKV + + NG Y ++ Sbjct: 323 RGRVSGLGNPTFAVDLVNGLGKVPLLPEYLISKKNGFYEFKNYQGK 368 >gi|251788023|ref|YP_003002744.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591] gi|247536644|gb|ACT05265.1| lysine 2,3-aminomutase YodO family protein [Dickeya zeae Ech1591] Length = 345 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 100/317 (31%), Positives = 160/317 (50%), Gaps = 4/317 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + Q+ +E + + + A + P + DP+ Q + ++E Sbjct: 23 ITDPDELLRLLALDNHPQLTAGREARRLFPLRVPRAFAARMRPGDARDPLLLQVLTAQDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + HS + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FIATPGFSHDPLDEQ-HSVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ Q+ E+IF+GGDPL+ L +L L I H++ LR H+R+P+ Sbjct: 140 NKANWRQALDYIRQHPQLDEIIFSGGDPLMAKDHELDWLLTELEQIPHLKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL + L ++ V + H NH E E ++RL AG+ LL+QSVLL+G Sbjct: 200 VIPARITAELCRRLAQSPLRVVLVTHINHANEIDTELADGMARLRQAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ LA L + I PYYLH D G +HF + ++ + +V L ++SG Sbjct: 260 VNDNANTLAALSNALFDAGILPYYLHVLDKVQGAAHFLVPDDDARTLVRELMMQVSGYLV 319 Query: 307 PFYILDLPGGYGKVKID 323 P ++ G K +D Sbjct: 320 PSLAREIGGEASKTLLD 336 >gi|238784793|ref|ZP_04628795.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC 43970] gi|238714306|gb|EEQ06316.1| Uncharacterized kamA family protein yjeK [Yersinia bercovieri ATCC 43970] Length = 335 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 94/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + + + + + + P +P DP+ Q + +EE Sbjct: 15 ITDPDELLRILFLNEHPNLQQGSAARRLFPLRVPRAFVARMQPGDPFDPLLLQVLTAREE 74 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 75 FIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR H+R+P+ Sbjct: 132 NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDSELSWLLDELESISHIKRLRIHTRLPV 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L ++ V + H NH E + ++++L AG+ LL+QSVLL+G Sbjct: 192 VIPARITAALCQRLSDSRLQVLMVTHINHANEIDQPLRDSMAQLKQAGVTLLNQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +N+D E+L L + I PYY+H D G +HF + +E ++++ L ++SG Sbjct: 252 VNNDAEVLTTLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311 Query: 307 PFYILDLPGGYGKVKIDTHNIKKV 330 P ++ G K +D ++ Sbjct: 312 PRLAREIGGQPSKTPLDLRLMQSE 335 >gi|153838020|ref|ZP_01990687.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810] gi|149748628|gb|EDM59487.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus AQ3810] Length = 340 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 97/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAKLLEILEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPKDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P +E + DP+ + + + G++H+Y +R+L+ + C V CR+CFRR + Sbjct: 78 PLSDEFEVHAGYSNDPLDEQ-DNAIPGLLHKYKNRVLMIVKGGCAVNCRYCFRRHFPYQE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + + Y+ EK ++ EVIF+GGDPL+ + +L+ + I H++ LR H Sbjct: 137 NKS--GKQAWSQCIEYMAEKPELNEVIFSGGDPLMAKDDEIHWLLEHIAKIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL Q LK + + + H NH E ++E A+ +L A + LL+Q Sbjct: 195 SRLPVVIPARITDELCQLLKASRLQIILVTHINHANEINDELRQAMKKLKEANVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + L+ L + I PYYLH D G +HF + E ++++ L E + Sbjct: 255 VLLKGVNDSVDALSQLSEALFDAGILPYYLHVLDKVQGAAHFMVDDERARQLMVGLLENV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLIPTLTREIGGRKSKTPLDLH 338 >gi|46203355|ref|ZP_00051632.2| COG1509: Lysine 2,3-aminomutase [Magnetospirillum magnetotacticum MS-1] Length = 312 Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats. Identities = 163/309 (52%), Positives = 213/309 (68%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 L S L A LI + ++ ++ Y++++T +A LI P P+DPIARQF+P+ EE Sbjct: 4 ALKSTAALARAGLIDAAVLPVLERVAARYAVSVTADMAELIEPGRPDDPIARQFVPRAEE 63 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L P ER DPIGD+ H P+ GIVHRYPDR+LLK LHVCPVYCRFCFRRE VG + L Sbjct: 64 LETNPRERADPIGDDVHEPVPGIVHRYPDRVLLKPLHVCPVYCRFCFRRERVGPEGQGSL 123 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + A YI + +IWEV+ TGGDP LS +RL + + L I HV++LRFH+RVP+ Sbjct: 124 SEAELAVAYRYIADHPEIWEVVVTGGDPFALSPRRLAGIAEALAAIPHVRVLRFHTRVPM 183 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V+P RI+ L+ LK V++A+HANHP EF+ A AAI+RL +AGI ++SQSVLL+G Sbjct: 184 VEPARIDERLVAALKRFSGAVFVALHANHPREFTPAARAAIARLVDAGIPMVSQSVLLRG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD + L LMR FVE RIKPYYLH DLA GT H R T+ EGQ ++ L+ ++SGL Q Sbjct: 244 VNDDADTLEALMRGFVENRIKPYYLHQGDLAPGTGHLRTTLPEGQALMRRLRGRLSGLAQ 303 Query: 307 PFYILDLPG 315 P Y+LD+P Sbjct: 304 PLYVLDIPA 312 >gi|229527414|ref|ZP_04416806.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)] gi|229335046|gb|EEO00531.1| lysine 2,3-aminomutase [Vibrio cholerae 12129(1)] Length = 340 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 100/324 (30%), Positives = 164/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVI +GGDPL+ L +++ + I H++ LR H Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVEMFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++ Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|238918348|ref|YP_002931862.1| hypothetical protein NT01EI_0386 [Edwardsiella ictaluri 93-146] gi|238867916|gb|ACR67627.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146] Length = 342 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 102/315 (32%), Positives = 159/315 (50%), Gaps = 3/315 (0%) Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70 A L L Q E + + + + I +PNDP+ RQ + E Sbjct: 27 ADLLAQLGLSDHPQWLAGCEARRLFPLRVPHAFISRIRRGDPNDPLLRQVMSDAAEFIET 86 Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 P DP+ + HS + G++H+Y +R LL + C V CR+CFRR + + + Sbjct: 87 PGFSTDPLAEQ-HSVVPGLLHKYQNRALLLVKGSCAVNCRYCFRRHFPYQENQG--TRAN 143 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + A+AY+ E ++ E+IF+GGDPL+ L + L + H++ LR HSR+P+V P Sbjct: 144 WQRAVAYLCEHPELDEIIFSGGDPLMAKDHELDWLFTQLEQLPHLRRLRIHSRLPVVIPA 203 Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 R+ L Q + ++ + + H NH E E A+ RL AG+ LL+QSVLL+GIND+ Sbjct: 204 RVTDALCQRMADSRLQMILVTHINHANEIDEALSEAMERLKQAGVTLLNQSVLLRGINDN 263 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 + LA L E I PYYLH D G +HF + +E ++++ L ++SG P Sbjct: 264 ADTLAALSNALFEAGILPYYLHVLDKVQGGAHFMVPDDEARRLMNGLLSRVSGYLVPRLT 323 Query: 311 LDLPGGYGKVKIDTH 325 ++ G K +D H Sbjct: 324 REIGGEPSKTPLDLH 338 >gi|323138167|ref|ZP_08073240.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC 49242] gi|322396629|gb|EFX99157.1| lysine 2,3-aminomutase YodO family protein [Methylocystis sp. ATCC 49242] Length = 363 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 170/326 (52%), Positives = 223/326 (68%), Gaps = 2/326 (0%) Query: 22 KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81 + ++ + + YS+A+TP +A LI+ +P DPIARQF+P EL LP+E DPIGD+ Sbjct: 36 PGRAQALRGVESQYSVAVTPDMAALIDAADPADPIARQFLPDARELVTLPQELADPIGDD 95 Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 HSP G+VHRYPDR+LLKLL VCPVYCRFCFRRE VG KG VLS + T+AAL YI Sbjct: 96 AHSPAPGLVHRYPDRVLLKLLTVCPVYCRFCFRRETVGRGKGDVLSPEATDAALDYIAGH 155 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 QI+EVI TGGDPL+LS +RL V + L I HV +LR H+R P P + E + L+ Sbjct: 156 RQIFEVILTGGDPLLLSGRRLSAVARRLAKIPHVAVLRVHTRAPTAAPDLVTQERLDALR 215 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 E+GK +Y+A+H NH E + A AAI+RL AG LLSQ+VLLKG+NDD + L LMR Sbjct: 216 ESGKALYVALHVNHSRELTPAARAAIARLHEAGATLLSQTVLLKGVNDDADTLERLMRDL 275 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 V LR+KPYYLHHPDLA GTSHFRL+++ G ++ + L +++G+ P Y+LD+PGG+GK Sbjct: 276 VALRVKPYYLHHPDLAPGTSHFRLSLDAGLRVHSELTRRVTGVAVPRYVLDIPGGFGKAP 335 Query: 322 IDTHNIKKVGNGSYCITDHHNIVHDY 347 + + + G G + I D VH Y Sbjct: 336 VS--DAETDGEGGWRIADRSGRVHLY 359 >gi|294634433|ref|ZP_06712969.1| KamA family protein [Edwardsiella tarda ATCC 23685] gi|291092143|gb|EFE24704.1| KamA family protein [Edwardsiella tarda ATCC 23685] Length = 342 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 100/315 (31%), Positives = 160/315 (50%), Gaps = 3/315 (0%) Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70 A L +L + E + + + + P +P DP+ RQ + E Sbjct: 27 ADLLAQLSLADHPEWRAGCEARRLFPLRVPRAFIRRMRPGDPQDPLLRQVMSDAAEFIET 86 Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 P DP+ + HS + G++H+Y +R LL + C V CR+CFRR + + + Sbjct: 87 PGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYQENQG--TRAN 143 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + AL Y++E ++ E+IF+GGDPL+ L + L + H++ LR HSR+P+V P Sbjct: 144 WQRALEYLREHPELDEIIFSGGDPLMAKDHELDWLFSQLESLPHLKRLRIHSRLPVVIPA 203 Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 R+ L Q + E+ + + H NH E E AA+ RL AG+ LL+QSVLL+G+ND+ Sbjct: 204 RVTETLCQRMAESRLQMLLVTHINHANEIDEALSAAMQRLKQAGVTLLNQSVLLRGVNDN 263 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 + LA L + I PYYLH D G +HF + +E + ++ L ++SG P Sbjct: 264 ADTLAALSNALFDAGILPYYLHVLDRVQGGAHFMVPDDEARVLMHGLLARVSGYLVPRLT 323 Query: 311 LDLPGGYGKVKIDTH 325 ++ G K ++D H Sbjct: 324 REIGGEPSKTQLDLH 338 >gi|153825103|ref|ZP_01977770.1| conserved hypothetical protein [Vibrio cholerae MZO-2] gi|149741249|gb|EDM55291.1| conserved hypothetical protein [Vibrio cholerae MZO-2] Length = 340 Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 165/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++ Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|291615956|ref|YP_003518698.1| YjeK [Pantoea ananatis LMG 20103] gi|291150986|gb|ADD75570.1| YjeK [Pantoea ananatis LMG 20103] Length = 342 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + +++ + + + DP+ Q + ++E Sbjct: 23 VTDPHELLQLLALDHHPDLAAGGDARRLFALRVPRAFIRRMKKGDAQDPLLLQVLTSRQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + N S + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FVDAPGYSTDPLDEQN-SVVPGLLHKYKNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ +AAL YI ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+P+ Sbjct: 140 NKRNWQAALDYITAHPELDEIIFSGGDPLMAKDHELAWLIDALGAIPHLKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L E V + H NH E E A+ RL A + LL+QSVLL+G Sbjct: 200 VIPDRITEALCQTLAETRLQVLMVTHINHAREIDEALCDAMLRLKRADVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD + LA L + I PYYLH D G +HF ++ EE + ++ SL ++SG Sbjct: 260 VNDDAQTLAALSNALFDAGILPYYLHVLDKVQGAAHFFVSDEEARALMRSLLPRVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|197286378|ref|YP_002152250.1| radical SAM superfamily protein [Proteus mirabilis HI4320] gi|194683865|emb|CAR45006.1| radical SAM superfamily protein [Proteus mirabilis HI4320] Length = 342 Score = 399 bits (1027), Expect = e-109, Method: Composition-based stats. Identities = 93/320 (29%), Positives = 162/320 (50%), Gaps = 4/320 (1%) Query: 6 KTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 + ++ +L ++ ++ + + + + + +PNDP+ Q + Sbjct: 21 QAISDPVELLQLLALEHHAELQRGAQARRLFPLRVPREFVARMKKGDPNDPLLLQVLTAH 80 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E + P DP+ + ++ + G++H+Y +R LL + C V CR+CFRR + Sbjct: 81 AEFTLTPGFSTDPLDEQQNA-VPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPY--EDN 137 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 + + + A+ YI+ ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+ Sbjct: 138 KGNKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQLEAIPHIKRLRIHSRL 197 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V P RI L Q L+++ + +H NH E + A +L NA + LL+Q VLL Sbjct: 198 PVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDDALREACLKLKNAHVTLLNQGVLL 257 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +G+ND+ + LA+L R + I PYYLH D G +HF + E ++I+ SL +SG Sbjct: 258 RGVNDNAQTLADLSRALFDAGIMPYYLHVLDKVQGAAHFMVPDSEAREIMKSLMSLVSGY 317 Query: 305 CQPFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 318 MVPKLTREIGGEPSKTLLDL 337 >gi|300724424|ref|YP_003713744.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061] gi|297630961|emb|CBJ91641.1| putative aminomutase [Xenorhabdus nematophila ATCC 19061] Length = 342 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 99/318 (31%), Positives = 161/318 (50%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + E + + + A + +P DP+ Q + +EE Sbjct: 23 ITDPDELLHLLSLNTHSILKEGHGAKRLFPLRVPRSFAARMKKGDPRDPLLLQVLTAREE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P+ DP+ + S + G++H+Y +R LL + C V CR+CFRR + Sbjct: 83 FAVTPDFSTDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY--EDNKG 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + AL YI + +I E+IF+GGDPL+ L ++ + I HV+ LR H+R+P+ Sbjct: 140 NKNNWQLALDYIGQHPEIDEIIFSGGDPLMAKDHELDWLISRIESIPHVKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+RI L L ++ V + H NH E E +++RL AG+ LL+QSV L+ Sbjct: 200 VIPERITLALCNRLAQSHLQVIMVTHINHANEIDNEFRGSMTRLKQAGVTLLNQSVFLRD 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND+ E LA+L + I PYY+H D G +HF + EE + I+ L K+SG Sbjct: 260 INDNAETLADLSNVLFDTGILPYYIHVLDKVQGAAHFLVNDEEAKIIMRELLSKVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PRLTREIGGEPSKTPLDL 337 >gi|330862365|emb|CBX72524.1| uncharacterized kamA family protein yjeK [Yersinia enterocolitica W22703] Length = 328 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 98/331 (29%), Positives = 166/331 (50%), Gaps = 4/331 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 MQ +T +L + + + + + + + + P NP+DP+ Q Sbjct: 1 MQQLADVITDPDELLRILQLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQ 60 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + +EE P DP+ + S + G++H+Y +R LL + C + CR+CFRR Sbjct: 61 VLTAREEFIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPY 119 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + AL Y+ + ++ E+IF+GGDPL+ L +L + I H++ LR Sbjct: 120 QDNQG--NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWLLDEIESISHIKRLR 177 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P RI EL Q L ++ V + H NH E ++++L AG+ LL+ Sbjct: 178 IHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRDSMAQLKRAGVTLLN 237 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+G+NDD E+LA L T + I PYY+H D G +HF + +E ++++ L Sbjct: 238 QSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLS 297 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330 ++SG P ++ G K +D ++ Sbjct: 298 RVSGYLVPRLAREIGGQPSKTPLDLRLMQSE 328 >gi|183179663|ref|ZP_02957874.1| conserved hypothetical protein [Vibrio cholerae MZO-3] gi|183013074|gb|EDT88374.1| conserved hypothetical protein [Vibrio cholerae MZO-3] Length = 340 Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 165/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLMERIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVKLFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++ Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|153213997|ref|ZP_01949190.1| conserved hypothetical protein [Vibrio cholerae 1587] gi|124115567|gb|EAY34387.1| conserved hypothetical protein [Vibrio cholerae 1587] Length = 340 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 100/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVI +GGDPL+ L +++ + I H++ LR H Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVILSGGDPLMAKDHELAWLMERIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + L T + I PYYLH D G +HF ++ ++ ++I+A L E++ Sbjct: 255 VLLKGVNDTVDAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|253991228|ref|YP_003042584.1| hypothetical protein PAU_03754 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253782678|emb|CAQ85842.1| conserved hypothetical Protein [Photorhabdus asymbiotica] Length = 342 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 103/319 (32%), Positives = 166/319 (52%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + ++ + + + + A + +PNDP+ Q I EE Sbjct: 23 ITDPDELLQLLSLHEHPELTKGSSARRLFPLRVPRAFAARMRASDPNDPLLLQVITAPEE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 NI+P DP+ + S + G++H+Y +R LL + C V CR+CFRR + Sbjct: 83 FNIVPGFSADPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPY--EDNKG 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + AL YIQ+ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+ Sbjct: 140 NKHNWQQALNYIQQHPELDEIIFSGGDPLMAKDHELDWLISNLEQISHIKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L L ++ V + H NH E + ++ L +AGI LL+QSVLL+G Sbjct: 200 VIPARITTTLCNRLAQSRLQVIMVTHINHENEIDQSLRNSMMLLKHAGITLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +N+ P+ILANL + I PYY+H D G +HF ++ EE + I+ L K+SG Sbjct: 260 VNNHPDILANLSNALFDAGILPYYIHVLDKVQGAAHFMVSDEEARGIIRELLTKVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PRLAREIGGESSKTPLDLE 338 >gi|126464702|ref|YP_001045815.1| lysine 2,3-aminomutase YodO family protein [Rhodobacter sphaeroides ATCC 17029] gi|126106513|gb|ABN79043.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides ATCC 17029] Length = 345 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 155/343 (45%), Positives = 218/343 (63%), Gaps = 10/343 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64 + + S +DL +A L + + ++E++ + I LTP + +DP +ARQF+P Sbjct: 8 RAVESLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 61 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 +EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VG++ Sbjct: 62 DELEIRPEELADPIGDGARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGNEG-- 119 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 +L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV Sbjct: 120 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 179 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL Sbjct: 180 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 238 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +G+ND + L L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+ Sbjct: 239 RGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRTTIDEGRALMADLRRRITGI 298 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LDLPGG+GKV + ++ G G + + D +H Y Sbjct: 299 GLPSYVLDLPGGFGKVPLTHDHLIADGPGRWQVRDPQGGLHPY 341 >gi|322831134|ref|YP_004211161.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602] gi|321166335|gb|ADW72034.1| lysine 2,3-aminomutase YodO family protein [Rahnella sp. Y9602] Length = 342 Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats. Identities = 95/318 (29%), Positives = 160/318 (50%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + ++ +E + + + + P +P DP+ Q + +EE Sbjct: 23 ITDPDELLTLLALNDNAELQSGREARRLFPLRVPRAFVARMQPGDPQDPLLLQVLTAREE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FIAAPGFTTDPLDEQR-SVVPGLLHKYSNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI+ + ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+ Sbjct: 140 NKANWVQALDYIRTRPELDEIIFSGGDPLMAKDHELDWLIGELEGIAHIKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI Q L+++ V + H NH E + A++++L G+ LL+QSVLL+G Sbjct: 200 VIPARITDVFCQRLEKSRLQVLMVTHINHANEINNALRASMAKLKRHGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND ++LA L + I PYY+H D G +HF + +E + I+ L K+SG Sbjct: 260 VNDSADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVNDDEARVIMKGLMSKVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PKLTREIGGEPSKTILDL 337 >gi|229513581|ref|ZP_04403045.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21] gi|254285853|ref|ZP_04960815.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|297581499|ref|ZP_06943422.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|150424035|gb|EDN15974.1| conserved hypothetical protein [Vibrio cholerae AM-19226] gi|229349458|gb|EEO14414.1| lysine 2,3-aminomutase [Vibrio cholerae TMA 21] gi|297534337|gb|EFH73175.1| conserved hypothetical protein [Vibrio cholerae RC385] Length = 340 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR H Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++ Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|22124525|ref|NP_667948.1| hypothetical protein y0611 [Yersinia pestis KIM 10] gi|45440363|ref|NP_991902.1| hypothetical protein YP_0509 [Yersinia pestis biovar Microtus str. 91001] gi|51594759|ref|YP_068950.1| hypothetical protein YPTB0407 [Yersinia pseudotuberculosis IP 32953] gi|108809919|ref|YP_653835.1| hypothetical protein YPA_3929 [Yersinia pestis Antiqua] gi|108813477|ref|YP_649244.1| hypothetical protein YPN_3317 [Yersinia pestis Nepal516] gi|145600867|ref|YP_001164943.1| hypothetical protein YPDSF_3620 [Yersinia pestis Pestoides F] gi|150260603|ref|ZP_01917331.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125] gi|153950672|ref|YP_001402627.1| KamA family iron-sulfur cluster-binding protein [Yersinia pseudotuberculosis IP 31758] gi|218927556|ref|YP_002345431.1| hypothetical protein YPO0353 [Yersinia pestis CO92] gi|229836612|ref|ZP_04456778.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A] gi|229840221|ref|ZP_04460380.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229842302|ref|ZP_04462457.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str. India 195] gi|229903959|ref|ZP_04519072.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516] gi|21957321|gb|AAM84199.1|AE013663_5 hypothetical protein y0611 [Yersinia pestis KIM 10] gi|45435219|gb|AAS60779.1| Lysine 2,3-aminomutase [Yersinia pestis biovar Microtus str. 91001] gi|51588041|emb|CAH19647.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 32953] gi|108777125|gb|ABG19644.1| L-lysine 2,3-aminomutase [Yersinia pestis Nepal516] gi|108781832|gb|ABG15890.1| L-lysine 2,3-aminomutase [Yersinia pestis Antiqua] gi|115346167|emb|CAL19035.1| conserved hypothetical protein [Yersinia pestis CO92] gi|145212563|gb|ABP41970.1| L-lysine 2,3-aminomutase [Yersinia pestis Pestoides F] gi|149290011|gb|EDM40088.1| hypothetical protein YPE_2916 [Yersinia pestis CA88-4125] gi|152962167|gb|ABS49628.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pseudotuberculosis IP 31758] gi|229679729|gb|EEO75832.1| lysine 2,3-aminomutase [Yersinia pestis Nepal516] gi|229690612|gb|EEO82666.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str. India 195] gi|229696587|gb|EEO86634.1| lysine 2,3-aminomutase [Yersinia pestis biovar Orientalis str. PEXU2] gi|229706296|gb|EEO92304.1| lysine 2,3-aminomutase [Yersinia pestis Pestoides A] gi|320013781|gb|ADV97352.1| lysine 2,3-aminomutase [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 342 Score = 398 bits (1024), Expect = e-109, Method: Composition-based stats. Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + + + + + + P N +DP+ Q + +EE Sbjct: 23 ITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FITAPGFTHDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L +L L IKH++ LR H+R+P+ Sbjct: 140 NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L + V + H NH E +++RL AG+ LL+QSVLL+G Sbjct: 200 VIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +N+D ++LA L + I PYY+H D G +HF + +E ++++ L ++SG Sbjct: 260 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PRLTREVGGEPSKTPLDL 337 >gi|317046674|ref|YP_004114322.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b] gi|316948291|gb|ADU67766.1| lysine 2,3-aminomutase YodO family protein [Pantoea sp. At-9b] Length = 342 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 160/319 (50%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + ++ E E +++ + + + DP+ Q + ++E Sbjct: 23 VTDPAELLQLLALDRHAELAEGTEARRLFALRVPRAFIQRMKIGDAQDPLLLQVLTSRQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 N P DP+ + + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 83 FNDAPGYSTDPLDEQS-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ +AA+ YI + ++ E+IF+GGDPL+ L +++ L + H++ LR HSR+P+ Sbjct: 140 NKRNWQAAIDYIADHPELDEIIFSGGDPLMAKDHELAWLIEALEKLPHLKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L V + H NH E +E + L AG+ LL+QSVLL+G Sbjct: 200 VIPARITEGLCQLLANTRLQVLLVSHINHAQEIDDELRYGMQMLKRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + LA+L + I PYYLH D G +HF + +E + +V L +SG Sbjct: 260 VNDKAQQLADLSNALFDAGILPYYLHVLDKVQGAAHFFVPDDEARALVRELLTMVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D Sbjct: 320 PKLAREIGGEPSKTPLDLQ 338 >gi|153829470|ref|ZP_01982137.1| conserved hypothetical protein [Vibrio cholerae 623-39] gi|148875053|gb|EDL73188.1| conserved hypothetical protein [Vibrio cholerae 623-39] Length = 340 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 99/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR H Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++ Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D + Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLY 338 >gi|149192243|ref|ZP_01870457.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1] gi|148833916|gb|EDL50939.1| hypothetical protein VSAK1_11268 [Vibrio shilonii AK1] Length = 340 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 98/324 (30%), Positives = 160/324 (49%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ +L I + + + + + + NP DP+ RQ + Sbjct: 19 QLSN-AISDPYELLKQLEIDATPWENGLTARRLFPMRVPQSFVDRMEKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P +E + EDP+ + + + G++H+Y +R LL + C V CR+CFRR Sbjct: 78 PLSQEFEVHNGYSEDPL-EEQDAAVPGLLHKYHNRALLIVKGGCAVNCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + + AL YI +I E+I +GGDPL+ L +++ I H++ LR H Sbjct: 135 EDNKGGKANWQVALDYIAAHPEIDEIILSGGDPLMAKDSELAWLVQKAESIHHLKTLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P+RI EL Q LK+ + H NH E + E A+++R+ N G LL+Q Sbjct: 195 SRLPVVIPKRITEELCQLLKQTRLNTILVTHINHANEVNSEFSASMARIKNTGTTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + L + I PYYLH D G +HF ++ ++ + I+ L +++ Sbjct: 255 VLLKGVNDSVDAQFELSHALFSVGILPYYLHVLDKVQGAAHFFISDDDAKAIIQGLIKRV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P + G K +D H Sbjct: 315 SGYLVPKLTREEGGRASKTPLDLH 338 >gi|327485135|gb|AEA79542.1| Lysine 2,3-aminomutase [Vibrio cholerae LMA3894-4] Length = 340 Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats. Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLSAEFVIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR H Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++ Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|162419358|ref|YP_001605297.1| KamA family iron-sulfur cluster-binding protein [Yersinia pestis Angola] gi|165926739|ref|ZP_02222571.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Orientalis str. F1991016] gi|165936461|ref|ZP_02225029.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Orientalis str. IP275] gi|166011849|ref|ZP_02232747.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Antiqua str. E1979001] gi|166214027|ref|ZP_02240062.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Antiqua str. B42003004] gi|167400635|ref|ZP_02306144.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419290|ref|ZP_02311043.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167423829|ref|ZP_02315582.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|170026033|ref|YP_001722538.1| lysine 2,3-aminomutase YodO family protein [Yersinia pseudotuberculosis YPIII] gi|186893766|ref|YP_001870878.1| lysine 2,3-aminomutase YodO family protein [Yersinia pseudotuberculosis PB1/+] gi|270489053|ref|ZP_06206127.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27] gi|294502464|ref|YP_003566526.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis Z176003] gi|162352173|gb|ABX86121.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis Angola] gi|165915577|gb|EDR34186.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Orientalis str. IP275] gi|165921362|gb|EDR38586.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Orientalis str. F1991016] gi|165989208|gb|EDR41509.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Antiqua str. E1979001] gi|166204822|gb|EDR49302.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Antiqua str. B42003004] gi|166963284|gb|EDR59305.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050003|gb|EDR61411.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167057999|gb|EDR67745.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis biovar Mediaevalis str. K1973002] gi|169752567|gb|ACA70085.1| lysine 2,3-aminomutase YodO family protein [Yersinia pseudotuberculosis YPIII] gi|186696792|gb|ACC87421.1| lysine 2,3-aminomutase YodO family protein [Yersinia pseudotuberculosis PB1/+] gi|262360494|gb|ACY57215.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis D106004] gi|270337557|gb|EFA48334.1| lysine-2,3-aminomutase-related protein [Yersinia pestis KIM D27] gi|294352923|gb|ADE63264.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis Z176003] Length = 334 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + + + + + + P N +DP+ Q + +EE Sbjct: 15 ITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREE 74 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 75 FITAPGFTHDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L +L L IKH++ LR H+R+P+ Sbjct: 132 NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLRIHTRLPV 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L + V + H NH E +++RL AG+ LL+QSVLL+G Sbjct: 192 VIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLNQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +N+D ++LA L + I PYY+H D G +HF + +E ++++ L ++SG Sbjct: 252 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 312 PRLTREVGGEPSKTPLDL 329 >gi|329296403|ref|ZP_08253739.1| putative lysine aminomutase [Plautia stali symbiont] Length = 342 Score = 397 bits (1022), Expect = e-109, Method: Composition-based stats. Identities = 95/303 (31%), Positives = 152/303 (50%), Gaps = 3/303 (0%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN 82 ++ E +++ + + N DP+ Q + ++E P DP+ + + Sbjct: 39 AELAAGSEARRLFALRVPRAFIQRMQRGNAQDPLLLQVLTSRQEFTDAPGYSTDPLDEQS 98 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 S + G++H+Y +R +L + C V CR+CFRR + ++ +AA+ YI Sbjct: 99 -SVVPGLLHKYKNRAMLLVKGGCAVNCRYCFRRHFPYQDNQG--NKRNWQAAIDYIAAHP 155 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 ++ E+IF+GGDPL+ + L ++ L I H++ LR HSR+P+V P RI L Q L + Sbjct: 156 ELDEIIFSGGDPLMAKDQELAWLIGALENIPHLKRLRIHSRLPVVIPARITEGLCQLLAD 215 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 V + H NH E E + RL AG+ LL+QSVLL+G+NDD + LA L Sbjct: 216 TRLQVLLVSHINHAQEIDEALRERMQRLKRAGVTLLNQSVLLRGVNDDAQTLAQLSNALF 275 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + I PYYLH D G +HF + E+ + +V L +SG P ++ G K + Sbjct: 276 DAGILPYYLHVLDKVQGAAHFFVPDEQARALVRQLLTMVSGYMVPKLAREIGGEPSKTPL 335 Query: 323 DTH 325 D Sbjct: 336 DLQ 338 >gi|15642656|ref|NP_232289.1| hypothetical protein VC2661 [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121590925|ref|ZP_01678247.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121727598|ref|ZP_01680706.1| conserved hypothetical protein [Vibrio cholerae V52] gi|147674649|ref|YP_001218151.1| hypothetical protein VC0395_A2235 [Vibrio cholerae O395] gi|153819801|ref|ZP_01972468.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|153821563|ref|ZP_01974230.1| conserved hypothetical protein [Vibrio cholerae B33] gi|227082777|ref|YP_002811328.1| hypothetical protein VCM66_2581 [Vibrio cholerae M66-2] gi|229507290|ref|ZP_04396795.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286] gi|229509786|ref|ZP_04399267.1| lysine 2,3-aminomutase [Vibrio cholerae B33] gi|229516911|ref|ZP_04406357.1| lysine 2,3-aminomutase [Vibrio cholerae RC9] gi|229606796|ref|YP_002877444.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236] gi|254225400|ref|ZP_04919011.1| conserved hypothetical protein [Vibrio cholerae V51] gi|254851197|ref|ZP_05240547.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255744377|ref|ZP_05418329.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101] gi|262158513|ref|ZP_06029628.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1] gi|262170093|ref|ZP_06037782.1| lysine 2,3-aminomutase [Vibrio cholerae RC27] gi|298500520|ref|ZP_07010324.1| conserved hypothetical protein [Vibrio cholerae MAK 757] gi|9657254|gb|AAF95802.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121547247|gb|EAX57371.1| conserved hypothetical protein [Vibrio cholerae 2740-80] gi|121630089|gb|EAX62494.1| conserved hypothetical protein [Vibrio cholerae V52] gi|125622034|gb|EAZ50357.1| conserved hypothetical protein [Vibrio cholerae V51] gi|126509662|gb|EAZ72256.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457] gi|126520948|gb|EAZ78171.1| conserved hypothetical protein [Vibrio cholerae B33] gi|146316532|gb|ABQ21071.1| conserved hypothetical protein [Vibrio cholerae O395] gi|227010665|gb|ACP06877.1| conserved hypothetical protein [Vibrio cholerae M66-2] gi|227014549|gb|ACP10759.1| conserved hypothetical protein [Vibrio cholerae O395] gi|229345974|gb|EEO10946.1| lysine 2,3-aminomutase [Vibrio cholerae RC9] gi|229353260|gb|EEO18199.1| lysine 2,3-aminomutase [Vibrio cholerae B33] gi|229354795|gb|EEO19716.1| lysine 2,3-aminomutase [Vibrio cholerae BX 330286] gi|229369451|gb|ACQ59874.1| lysine 2,3-aminomutase [Vibrio cholerae MJ-1236] gi|254846902|gb|EET25316.1| conserved hypothetical protein [Vibrio cholerae MO10] gi|255737902|gb|EET93295.1| lysine 2,3-aminomutase [Vibrio cholera CIRS 101] gi|262021501|gb|EEY40213.1| lysine 2,3-aminomutase [Vibrio cholerae RC27] gi|262029674|gb|EEY48323.1| lysine 2,3-aminomutase [Vibrio cholerae INDRE 91/1] gi|297540689|gb|EFH76746.1| conserved hypothetical protein [Vibrio cholerae MAK 757] Length = 340 Score = 397 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 99/324 (30%), Positives = 164/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR H Sbjct: 135 EDNKGGKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++ Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|262364441|gb|ACY60998.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis D182038] Length = 334 Score = 397 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 96/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + + + + + + P N +DP+ Q + +EE Sbjct: 15 ITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREE 74 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 75 FITAPGFTHDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L +L L IKH++ LR H+R+P+ Sbjct: 132 NKANWLKALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLRIHTRLPV 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L + V + H NH E +++RL AG+ LL+QSVLL+G Sbjct: 192 VIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLNQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +N+D ++LA L + I PYY+H D G +HF + +E ++++ L ++SG Sbjct: 252 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 311 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 312 PRLTREVGGEPSKTPLDL 329 >gi|95931361|ref|ZP_01314073.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] gi|95132577|gb|EAT14264.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] Length = 345 Score = 397 bits (1022), Expect = e-108, Method: Composition-based stats. Identities = 131/350 (37%), Positives = 188/350 (53%), Gaps = 12/350 (3%) Query: 1 MQLRHKTLTSAQDL--YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q R + DL L + ++ Y + +TP LI + DP+ Sbjct: 4 WQERSRNSILCSDLVAQRFGLDS----HALAQVVERYPMRITPHQFELIRQAD--DPLGC 57 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q IP EL DP+ + SP+ +VHRYP R+LL + C YCRFC R+ V Sbjct: 58 QVIPDPRELLD-DSLLVDPLNEEQLSPVPHLVHRYPYRVLLLVAGSCFSYCRFCTRKRKV 116 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G +S D + YI E ++ EVI +GGDPL +S + L VL L I H+Q++ Sbjct: 117 GCS-SMSVSLGDILKGIDYIAEHPEVNEVILSGGDPLTMSDRLLDDVLARLSRIPHLQVV 175 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R SR P+V P+RI L L+ +PVY H NHP E +E + A RL +G+I+ Sbjct: 176 RIGSRAPVVMPERITDALCALLRRY-QPVYFLTHFNHPREITEATVEACQRLVRSGVIVA 234 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLL+G+ND+ E L L T L+I+PYYLH DL GTSHFR +E+G I+ L+ Sbjct: 235 NQTVLLRGVNDNSETLFKLFHTLYRLQIRPYYLHQMDLTCGTSHFRTRLEDGIAIMDDLR 294 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 +SGL P YI+DLPGG+GKV + ++++G+ + + + DYP Sbjct: 295 GPLSGLAVPSYIVDLPGGHGKVPVTPDYVQRLGDHA-RLRAADGTLVDYP 343 >gi|318607441|emb|CBY28939.1| lysine 2,3-aminomutase [Yersinia enterocolitica subsp. palearctica Y11] Length = 343 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 96/324 (29%), Positives = 164/324 (50%), Gaps = 4/324 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + + + + + + P NP+DP+ Q + +EE Sbjct: 23 ITDPDELLRILQLNEHPNLQQGTAARRLFPLRVPRAFVARMQPGNPSDPLLLQVLTAREE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C + CR+CFRR Sbjct: 83 FIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPYQDNQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL Y+ + ++ E+IF+GGDPL+ L +L + I H++ LR H+R+P+ Sbjct: 140 NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWLLDEIESISHIKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL Q L ++ V + H NH E ++++L AG+ LL+QSVLL+G Sbjct: 200 VIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRDSMAQLKRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD E+LA L T + I PYY+H D G +HF + +E ++++ L ++SG Sbjct: 260 VNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMVDDDEARQLMKGLLSRVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTHNIKKV 330 P ++ G K +D ++ Sbjct: 320 PRLAREIGGQPSKTPLDLRLMQSE 343 >gi|258620467|ref|ZP_05715505.1| conserved hypothetical protein [Vibrio mimicus VM573] gi|258587346|gb|EEW12057.1| conserved hypothetical protein [Vibrio mimicus VM573] Length = 340 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 164/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E + P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIATIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+N+ E L T + I PYYLH D G +HF ++ +E ++I+A L E++ Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDEARQIMAGLIERV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLIPKLTREIGGKPSKTPLDLH 338 >gi|262166674|ref|ZP_06034411.1| lysine 2,3-aminomutase [Vibrio mimicus VM223] gi|262026390|gb|EEY45058.1| lysine 2,3-aminomutase [Vibrio mimicus VM223] Length = 340 Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats. Identities = 100/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E + P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIATIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+N+ E L T + I PYYLH D G +HF ++ E ++++A L E++ Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDAEARQLMAGLIERV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGKPSKTPLDLH 338 >gi|77465239|ref|YP_354742.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1] gi|77389657|gb|ABA80841.1| L-lysine 2,3-aminomutase [Rhodobacter sphaeroides 2.4.1] Length = 340 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 156/343 (45%), Positives = 218/343 (63%), Gaps = 10/343 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP-IARQFIPQK 64 + L + +DL +A L + + ++E++ + I LTP + +DP +ARQF+P Sbjct: 3 RALENLRDLCDAGLTDPAE-NRLEEVARAFRIRLTPQMVA-----ASDDPSVARQFVPTL 56 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 +EL I PEE DPIGD SP+ G+ HRYPDR++L + C VYCRFCFRRE+VGS+ Sbjct: 57 DELEIRPEELADPIGDAARSPVPGLTHRYPDRVILHVTRTCDVYCRFCFRREVVGSEG-- 114 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 +L D AAL YI + EVI TGGDPL LS +RL+ ++ L I H+ +R HSRV Sbjct: 115 ILPEADLSAALDYIDATPSVREVILTGGDPLTLSPRRLRAIIGRLGQIGHLDQVRIHSRV 174 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+V P RI+ +++ L PV+I +H NHP E +A AA+ RLA+ GI LLSQSVLL Sbjct: 175 PVVAPHRIDDNMLRALL-GPIPVWIVVHVNHPGELRLDARAALGRLADRGIPLLSQSVLL 233 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +G+ND + L L R + LR+KPYYLHH DLA G HFR TI+EG+ ++A L+ +I+G+ Sbjct: 234 RGVNDTVDTLEELFRALLRLRVKPYYLHHCDLAKGAGHFRPTIDEGRALMAELRRRITGI 293 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LDLPGG+GKV + ++ G G + + D +H Y Sbjct: 294 GLPSYVLDLPGGFGKVPLTYDHLIADGPGRWQVRDPQGGLHPY 336 >gi|262170406|ref|ZP_06038084.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451] gi|261891482|gb|EEY37468.1| lysine 2,3-aminomutase [Vibrio mimicus MB-451] Length = 340 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 100/324 (30%), Positives = 164/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E + P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIATIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+N+ E L T + I PYYLH D G +HF ++ +E ++++A L E++ Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDEARQLMAGLIERV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGKPSKTPLDLH 338 >gi|197334541|ref|YP_002157135.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11] gi|197316031|gb|ACH65478.1| lysine 2,3-aminomutase [Vibrio fischeri MJ11] Length = 340 Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 165/319 (51%), Gaps = 3/319 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +++ L + I ++ E +++ + + + NP DP+ RQ +P +E Sbjct: 23 AISNPHQLLSTLGIDSAPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + + G++H+Y +R+LL + C V CR+CFRR + Sbjct: 83 FEVHEGYSNDPL-EEQDNDQPGLLHKYKNRVLLIVKGGCAVNCRYCFRRHFPY--QDNKG 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + ++ YI +I EVIF+GGDPL+ LQ +++ + I H++ LR HSR+P+ Sbjct: 140 SKTVWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIEHIEAIPHIKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q K+ + + H NH E ++ I+++ +L A + LL+QSVLLKG Sbjct: 200 VIPNRITDTLCQLFKKTRLQIILVTHINHANEINQTLISSMKKLKLAHVTLLNQSVLLKG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + L L + I PYYLH D G +HF ++ E+ ++++ L E +SG Sbjct: 260 VNDNTDTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDEKAKQLMGELIENVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D + Sbjct: 320 PTLAREIGGRKSKTPLDLY 338 >gi|302038861|ref|YP_003799183.1| l-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii] gi|300606925|emb|CBK43258.1| L-lysine 2,3-aminomutase [Candidatus Nitrospira defluvii] Length = 377 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 129/348 (37%), Positives = 209/348 (60%), Gaps = 10/348 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +++ +DL + + ++I++I Y + +TP + I D I +Q +P + Sbjct: 10 QSVVKPKDLADRLGVDPKEIEDI---VGDYPMRITPTVLATIKEKG--DAIWKQVVPDRA 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E+ E +DP+ ++ SP+ +VHRYPDR+LL + + CP+YCRFC R+ +VG K Sbjct: 65 EMADADAE-DDPLEEDLMSPVPHLVHRYPDRVLLMVTNQCPIYCRFCTRKRLVG--KPGF 121 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L + + A+AY++E ++ +VI +GGDPL+L L+++LK+LR I H++++R +RVP Sbjct: 122 LKKGELDRAIAYLREHQEVRDVILSGGDPLLLPDHLLERILKSLRTIPHLELIRIGTRVP 181 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 P+RI P+L +K+ P Y+ +H NHP E + E A LA+AG+ L +Q+VLLK Sbjct: 182 GSLPERITPKLCDIIKKY-HPFYMNLHFNHPDELTPEVKRACGMLADAGVPLGAQTVLLK 240 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+NDDPEI+ LM + R+KPYYL+ DL GT+HFR ++E G KI+ SL+ SG+ Sbjct: 241 GVNDDPEIMKRLMHQLLLARVKPYYLYQADLTKGTNHFRTSVETGLKIIKSLQGHTSGMG 300 Query: 306 QPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYPPKSS 352 P +++D PGG GK+ + + + S + ++ N YP S Sbjct: 301 VPHFVIDAPGGGGKIPLLPADYLVNLDEDSAVLRNYENRTFHYPQPGS 348 >gi|229524637|ref|ZP_04414042.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426] gi|229338218|gb|EEO03235.1| lysine 2,3-aminomutase [Vibrio cholerae bv. albensis VL426] Length = 340 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 99/323 (30%), Positives = 164/323 (50%), Gaps = 4/323 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR H Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++ Sbjct: 255 VLLKGVNDTVDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDT 324 SG P ++ G K +D Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDL 337 >gi|59712946|ref|YP_205722.1| lysine aminomutase [Vibrio fischeri ES114] gi|59481047|gb|AAW86834.1| predicted lysine aminomutase [Vibrio fischeri ES114] Length = 340 Score = 396 bits (1019), Expect = e-108, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 167/319 (52%), Gaps = 3/319 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +++ L + I ++ E +++ + + + NP DP+ RQ +P +E Sbjct: 23 AISNPHQLLSTLGIDSAPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + ++ L G++H+Y +R+LL + C V CR+CFRR + Sbjct: 83 FEVHEGYSNDPLEEQDNQQL-GLLHKYKNRVLLIVKGGCAVNCRYCFRRHFPY--QDNKG 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + ++ YI +I EVIF+GGDPL+ LQ ++ + I H++ LR HSR+P+ Sbjct: 140 SKTIWQESIDYIANHPEINEVIFSGGDPLMAKDHELQWLIDHIEAIPHIKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q + + + H NH E ++E I+++ +L A + LL+QSVLLKG Sbjct: 200 VIPNRITDTLCQLFTKTRLQIILVTHINHANEINQELISSMHKLKLAHVTLLNQSVLLKG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ + L L + I PYYLH D G +HF ++ E+ +++++ L E +SG Sbjct: 260 VNDNADTLTQLSEALFDAGILPYYLHVLDKVQGAAHFFISDEKAKQLMSELIENVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D + Sbjct: 320 PTLAREIGGRKSKTPLDLY 338 >gi|158522524|ref|YP_001530394.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus oleovorans Hxd3] gi|158511350|gb|ABW68317.1| lysine 2,3-aminomutase YodO family protein [Desulfococcus oleovorans Hxd3] Length = 358 Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats. Identities = 132/351 (37%), Positives = 198/351 (56%), Gaps = 10/351 (2%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + +DL + + Y +++ P +LI P DP+ RQ Sbjct: 17 WQTIAGRAIADPKDLPDRLKAPP----GAAAVCRAYPMSVNPYYLSLI--QAPGDPLWRQ 70 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P EL+ + +DP+ + SP+ G++HRYPDR+++ + CPV CRFCFR+ + G Sbjct: 71 VVPDARELSGTLTD-DDPLTETAQSPVPGLIHRYPDRVVVLVSGRCPVVCRFCFRKRLAG 129 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 L+ +AA AY++ + EVIF+GGDPL+L +L L+ I HV+ LR Sbjct: 130 R-AAASLTDDQVDAAAAYVRAAPAVREVIFSGGDPLMLEDDKLCAALEKFAAIGHVETLR 188 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R P+ PQRI +L+ LK+ P+Y+ +H NHP E + A AA +RLA+AGI L S Sbjct: 189 IHTRTPVALPQRITGDLVVLLKKF-LPLYVNVHVNHPREITAPAEAACARLADAGIPLGS 247 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL GINDD + LMR + +R++PYYLHHPD+ GT HFR I G ++ SL Sbjct: 248 QTVLLAGINDDAITMEALMRALLRIRVRPYYLHHPDVVKGTGHFRPPINRGLSVMRSLVG 307 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 ++ G+ P Y++DLPGG GKV + + G + ++ V YP K Sbjct: 308 RVPGMAVPRYVIDLPGGGGKVPLLPDYVVSSETGHLVVKNYQGKVFVYPEK 358 >gi|242237917|ref|YP_002986098.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii Ech703] gi|242129974|gb|ACS84276.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii Ech703] Length = 348 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 99/318 (31%), Positives = 161/318 (50%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + E + + + A + P +P+DP+ +Q I K E Sbjct: 23 ITDPGELLQLLALSDHPLLSQGHEARKLFPLRVPRAFAARMQPGDPDDPLLKQVITSKAE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + S + G++H+Y +R LL + C V CR+CFRR + Sbjct: 83 FLLTPGFTNDPLDEQR-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR HSR+P+ Sbjct: 140 SKANWRQALDYIRQHPELDEIIFSGGDPLMAKDHELDGLLTGLEEITHLKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L L ++ + + H NH E E + RL AG+ LL+QSVLL+G Sbjct: 200 VIPARITEALSLRLAQSRLQILLVTHINHANEIDAELAQGLHRLRRAGVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + LANL + + PYYLH D G +HF + ++ ++ +L ++SG Sbjct: 260 VNDSADELANLSHALFDAGVMPYYLHVLDKVQGAAHFLVPDDKATALIKTLMTQVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P + ++ G K +D Sbjct: 320 PRLVREIGGEASKTPLDL 337 >gi|260463114|ref|ZP_05811317.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium opportunistum WSM2075] gi|259031235|gb|EEW32508.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium opportunistum WSM2075] Length = 366 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 139/349 (39%), Positives = 200/349 (57%), Gaps = 5/349 (1%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + +DL A + + ++ + + + + +LI+ ++P DPI Q Sbjct: 15 WQDDVRQGVRHVRDL-AALPLSPAERQAAQQAATLHKVRVPKTYLDLIDWNDPADPIRAQ 73 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 IP +EL E DPI D++ SP+ + HR+ DR+LL + C VYCRFCFR+E + Sbjct: 74 VIPSPDELVEAEGELGDPIADHDFSPVPRLTHRHGDRVLLFPTYQCAVYCRFCFRKESLT 133 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 S G + + E ALAYI + S+I EVI TGGDPL LS K L ++ + I HV++LR Sbjct: 134 S-IGRGYTREALEPALAYIADHSEIREVILTGGDPLSLSDKALAEIFMRIEAIPHVRLLR 192 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+RVP+ P RI P L++ L + V + H NH E ++ A AA + AG +LL+ Sbjct: 193 IHTRVPVALPSRITPGLVEAL-QGRLMVTVVTHFNHAREITDAAEAACRTMRQAGFVLLN 251 Query: 240 QSVLLKGINDDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 QSVLLKG+ND E+L L R L +KPYYLHH DLA G +H R TI +GQ +V +L+ Sbjct: 252 QSVLLKGVNDSVEVLEELCRELMYRLGVKPYYLHHGDLARGMAHRRTTIAQGQALVEALR 311 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 ++SG+C P Y+LDLP G GKV + +I+ S+ I V Y Sbjct: 312 ARLSGICNPVYVLDLPEGGGKVPLGPCSIEGRDGESWRIRGQDGAVRGY 360 >gi|83591564|ref|YP_425316.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170] gi|83574478|gb|ABC21029.1| L-lysine 2,3-aminomutase [Rhodospirillum rubrum ATCC 11170] Length = 324 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 170/318 (53%), Positives = 219/318 (68%), Gaps = 2/318 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +L S DL A LI E++ E+ + Y++A+ +A I P+ +ARQF+P E Sbjct: 6 SLRSLTDLAEAGLIAPERLAELAPVVARYALAIPAGLAQAIAEAGPDSALARQFVPSAAE 65 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L LPEE DPIGD+ HSP+KG+VHRYPDR+LLK +H CPVYCRFCFRRE VG G L Sbjct: 66 LTTLPEEITDPIGDHAHSPVKGLVHRYPDRVLLKPVHACPVYCRFCFRREHVGP-GGESL 124 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + LAYI + +IWEV+ +GGDP+ILS +RL +L L I H+ LR HSRVP+ Sbjct: 125 SEAEMARVLAYIGDHREIWEVVLSGGDPMILSARRLDALLGALEAIPHIGSLRIHSRVPV 184 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 +DP RI P +I L+ + KPV++ IHANHP EF+ A A ++ LA+AG+ LLSQSVLLKG Sbjct: 185 LDPARITPAVIAALRRS-KPVWLVIHANHPDEFTAAARACVASLADAGVPLLSQSVLLKG 243 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD L LMRTFV RIKPYYLH D+A GT+HFR +++EG+ +VA+L+ SGLCQ Sbjct: 244 VNDDLATLTRLMRTFVANRIKPYYLHQTDMAPGTAHFRTSLDEGRALVAALRATASGLCQ 303 Query: 307 PFYILDLPGGYGKVKIDT 324 P Y+LD P G GK ID Sbjct: 304 PTYVLDAPDGPGKRPIDV 321 >gi|296100915|ref|YP_003611061.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC 13047] gi|295055374|gb|ADF60112.1| L-lysine 2,3-aminomutase [Enterobacter cloacae subsp. cloacae ATCC 13047] Length = 342 Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats. Identities = 102/297 (34%), Positives = 162/297 (54%), Gaps = 3/297 (1%) Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88 +E +++ + + NP+DP+ +Q + +EE P DP+ + +S + G Sbjct: 45 REAKRLFALRVPRAFVARMEKGNPDDPLLKQTLTAQEEFITAPGYSTDPL-EEQNSVVPG 103 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 ++H+Y +R LL + C V CR+CFRR ++ + ++ + AL YI S++ E+I Sbjct: 104 LLHKYLNRALLLVKGGCAVNCRYCFRRHFPYAENQG--NKRNWQVALDYIAAHSELDEII 161 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 F+GGDPL+ L +L L I H++ LR HSR+PIV P RI L+ L+++ V Sbjct: 162 FSGGDPLMAKDYELDWLLTQLEAIPHIKRLRIHSRLPIVIPARITDGLVSRLEQSRLQVL 221 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + H NH E + AA+ RL AG+ LL+QSVLL+G+ND+ +LA+L + + P Sbjct: 222 LVNHINHANEIDDAFRAAMVRLRKAGVTLLNQSVLLRGVNDNARVLADLSNALFDAGVMP 281 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 YYLH D G +HF +T EE ++IV L +SG P ++ G K +D Sbjct: 282 YYLHVLDRVQGAAHFMVTDEEARQIVRELLTLVSGYMVPKLAREIGGEPSKTPLDLQ 338 >gi|330837285|ref|YP_004411926.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides DSM 17374] gi|329749188|gb|AEC02544.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta coccoides DSM 17374] Length = 358 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 115/335 (34%), Positives = 185/335 (55%), Gaps = 3/335 (0%) Query: 15 YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER 74 ++ E+ ++ ++ A+LI P + +DPI RQ +P E+ P E Sbjct: 20 RKQGIVLTEKEQAWEKDGTSPPFGVSTYYASLITPSDSDDPIRRQILPTSCEMMYSPGES 79 Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134 EDP+ + HS ++HRY +R+ + C VYCR CFRR G+Q+G +++D AA Sbjct: 80 EDPLAEEEHSVTSRLIHRYAERVAFLVTDACAVYCRHCFRRRFTGTQRG-PATTEDIIAA 138 Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 Y+ ++ E++FTGGD LS++++ ++ R ++ I+R SRVP+V P RI Sbjct: 139 ARYVGAHQEVKEILFTGGDMFTLSNEKIDALIGEFRAVRPDLIIRLCSRVPVVLPSRITD 198 Query: 195 ELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L+ +K+ P ++ + NHP E + ++ A +R +AGI + +QSVLL+G+NDD I Sbjct: 199 GLMAVMKKHSSAPFFLMVQFNHPRELTAQSREATARFIDAGIPVFNQSVLLRGVNDDAGI 258 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 L L + RIKPYYL DL GT+H R+ +E+G +V L+ ++SGL P Y +DL Sbjct: 259 LEELCNGLLAARIKPYYLFQGDLVEGTAHLRVPLEKGLALVKELRRRLSGLAMPVYAVDL 318 Query: 314 PGGYGKVKIDTHNIKKV-GNGSYCITDHHNIVHDY 347 P G GKV +D+ +K +G++ Y Sbjct: 319 PEGGGKVPVDSMYLKGRDSDGAWVFETPDGGERRY 353 >gi|37527976|ref|NP_931321.1| hypothetical protein plu4131 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36787412|emb|CAE16503.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 342 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 98/318 (30%), Positives = 159/318 (50%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + K + + + + + + +PNDP+ Q I EE Sbjct: 23 ITDPDELLQLLSLDKHPTLTKGSGARRLFPLRVPRAFVTRMQVSDPNDPLLLQVITTPEE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + S + G++H+Y +R LL + C + CR+CFRR + Sbjct: 83 FTLTPGFSTDPLDEQR-SAVPGLLHKYRNRALLLVKGGCAINCRYCFRRHFPY--EDNKG 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YIQ+ ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+ Sbjct: 140 NKRNWQQALDYIQQHPELDEIIFSGGDPLMAKDHELDWLISNLEKISHIKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L L ++ V + H NH E + ++ L AGI LL+QSVLL+G Sbjct: 200 VIPARITTTLCDRLAQSRLQVIMVTHINHANEIDQSLRNSMILLKQAGITLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IN+ + LA+L + I PYY+H D G +HF + EE + ++ L KISG Sbjct: 260 INNHSDTLADLSNALFDAGILPYYIHVLDKVQGAAHFMVNDEEAKGLIRELLTKISGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PRLAREIGGEPSKTPLDL 337 >gi|254509350|ref|ZP_05121438.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16] gi|219547715|gb|EED24752.1| lysine 2;3-aminomutase [Vibrio parahaemolyticus 16] Length = 340 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 98/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + + ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAKLLEKLEIDPAKWQDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P +E + DP+ + + G++H+Y +R L+ + C V CR+CFRR + Sbjct: 78 PLSQEFEVHEGYSNDPLQEQGNE-TPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + +L YI+++S++ EVI +GGDPL+ + LQ ++ + I H++ +R H Sbjct: 137 NKG--NKLVWQQSLDYIRQQSELNEVILSGGDPLMAKDEELQWLINHIADIPHIKRIRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI PEL+ L + V + H NH E + E A+ L AG+ LL+Q Sbjct: 195 SRLPVVIPARITPELLAILSGSRLQVIMVTHINHAQEINHELKRAMYDLKQAGVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 V+LKG+ND E L T + I PYY+H D G +HF ++ ++ + I+A L E++ Sbjct: 255 VMLKGVNDCVEAQVALSETLFDAGILPYYMHVLDKVQGAAHFYISDQQAKAIMAGLLERV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRKSKTPLDLH 338 >gi|261345001|ref|ZP_05972645.1| KamA family protein [Providencia rustigianii DSM 4541] gi|282567147|gb|EFB72682.1| KamA family protein [Providencia rustigianii DSM 4541] Length = 342 Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats. Identities = 97/325 (29%), Positives = 165/325 (50%), Gaps = 4/325 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q + +T+ +L ++ E E + + + + + +P+DP+ Q Sbjct: 17 QQLAEAVTNPDELLQILNLEDHLPSREGNEARKLFPLRVPRPFISRMKKGDPSDPLLLQV 76 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 + K E +I P DP+ + + + ++H+Y +R L+ + C V CR+CFRR Sbjct: 77 LTAKTEFDIHPGFSTDPL-EEQDNEIPSLLHKYHNRALMLVKGGCAVNCRYCFRRHFPY- 134 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + A+ YI+ S++ E+IF+GGDPL+ L ++ L I H+ LR Sbjct: 135 -EDNKGNKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQLEDIPHITRLRI 193 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 HSR+P+V P+RI L + L+++ V + H NH E + A+ +L AG+ LL+Q Sbjct: 194 HSRLPVVIPERITNTLCKRLEQSRLHVIMVTHVNHANEIDDSFTHAMQKLKRAGVTLLNQ 253 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+ +ND+ LANL E I PYYLH D G +HF ++ E ++++ L K Sbjct: 254 SVLLRQVNDNVTALANLSNALFEAGILPYYLHVLDKVQGAAHFLVSDNEARELIRELLSK 313 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325 +SG P ++ G K +D + Sbjct: 314 VSGYLVPKLAREIGGEPSKTLLDLN 338 >gi|218708305|ref|YP_002415926.1| hypothetical protein VS_0243 [Vibrio splendidus LGP32] gi|218321324|emb|CAV17274.1| Hypothetical protein VS_0243 [Vibrio splendidus LGP32] Length = 340 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 95/324 (29%), Positives = 153/324 (47%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L A I + +S+ + + NP+DP+ RQ + Sbjct: 19 QLSN-AISDPTKLLEALEIDPTPWQKGFAARELFSLRVPLSFVERMEKGNPHDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE + DP+ + + + G++H+Y R L+ + C + CR+CFRR Sbjct: 78 PLSEEFEVHQGYSADPL-EEQDNAIPGLLHKYKSRALMIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L Y+ + +I EVI +GGDPL+ L+ ++ + I HV+ +R H Sbjct: 135 QDNKGSKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAIEQIPHVKTVRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P R+ EL Q L V + H NH E + E A +L G LL+Q Sbjct: 195 SRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHKLKQTGATLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 V+LKG+N+ L L + I PYY+H D G +HF ++ EE + L ++ Sbjct: 255 VMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEEAKHHFKGLISEV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLH 338 >gi|261211227|ref|ZP_05925516.1| lysine 2,3-aminomutase [Vibrio sp. RC341] gi|260839728|gb|EEX66339.1| lysine 2,3-aminomutase [Vibrio sp. RC341] Length = 340 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 99/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E + P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLNAEFEVHPGYSNDPLDEQNNA-IPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLIERIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + + + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND L T + I PYYLH D G +HF ++ ++ ++I+A L E++ Sbjct: 255 VLLKGVNDTVAAQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|229521724|ref|ZP_04411142.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80] gi|229341318|gb|EEO06322.1| lysine 2,3-aminomutase [Vibrio cholerae TM 11079-80] Length = 340 Score = 394 bits (1014), Expect = e-108, Method: Composition-based stats. Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPLRLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPADPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E I P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLSAEFEIHPGYSHDPLDEQNNT-VPGLLHKYKNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPL+ + +++ + I H++ LR H Sbjct: 135 EDNKGSKSAWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHEIAWLMERIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEVNLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + +L T + I PYYLH D G +HF ++ ++ ++I+A L E++ Sbjct: 255 VLLKGVNDTLDAQVSLSETLFDAGILPYYLHVLDKVQGAAHFYVSDDKARQIMAGLIEQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|284008180|emb|CBA74439.1| radical SAM superfamily protein [Arsenophonus nasoniae] Length = 340 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 109/325 (33%), Positives = 165/325 (50%), Gaps = 4/325 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q + +T +L ++ ++ + + + + + NDP+ RQ Sbjct: 17 QQLAEAVTDPDELLRLLSLQNNPELRAGSAARALFPLRVPHPFIAKMRIGDANDPLLRQV 76 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 I K E N+ P DP+ ++ HSP+ G++H+Y DR+LL + C V CR+CFRR Sbjct: 77 ITLKSEFNLTPTFSADPLNEH-HSPIPGLLHKYQDRVLLLVKGGCAVNCRYCFRRHFPYE 135 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + ++ + AL YIQ +++ EVIF+GGDPL+ L ++ L I H++ LR Sbjct: 136 ENKG--NKQNWQTALNYIQRHTELNEVIFSGGDPLMAKDHELDWLMSRLETIPHIKRLRI 193 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 HSR+P+V P RI L Q + V + H NH E E A+ +L + LL+Q Sbjct: 194 HSRLPVVIPARITTTLCQRFNISRLQVIMVTHINHANEIDNEFSHAMEQLKQVNVTLLNQ 253 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+GIND+ + LA L E I PYYLH D G +HF +T EE + I+ L + Sbjct: 254 SVLLRGINDNADSLAKLSNKLFENGILPYYLHLLDKVQGAAHFMVTDEEARIIMKELLTR 313 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325 ISG P ++ G K ID Sbjct: 314 ISGYLVPRLTREIGGKLSKTPIDLQ 338 >gi|148976876|ref|ZP_01813531.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3] gi|145963750|gb|EDK29010.1| lysine 2;3-aminomutase [Vibrionales bacterium SWAT-3] Length = 340 Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats. Identities = 97/324 (29%), Positives = 158/324 (48%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L A I N +++ + + NP+DP+ RQ + Sbjct: 19 QLSN-AISDPTKLLEALEIDPTPWQAGFAARNLFALRVPLSFVERMEKGNPHDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE + DP+ + + + G++H+Y +R L+ + C V CR+CFRR Sbjct: 78 PLSEEFEVHEGYSADPL-EEQDNAIPGLLHKYKNRALMIVKGGCAVNCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L Y+ + S+I EVI +GGDPL+ ++ ++ + I HV+ +R H Sbjct: 135 QDNKGSKSVWQTSLDYVAQHSEINEVILSGGDPLMAKDSEIEWLIHAIEQIPHVETVRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL Q L + V + H NH E + E A+ +L +G LL+Q Sbjct: 195 SRLPVVIPARITDELCQTLSKTRLNVVMVSHINHANEINVELKQALLKLKFSGATLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 V+LKG+N+ L L + I PYY+H D G +HF ++ EE + L ++ Sbjct: 255 VMLKGVNNSANSLKELSEKLFDAGILPYYMHVLDKVQGAAHFYISDEEAKHHFKGLISEV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLH 338 >gi|320155059|ref|YP_004187438.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O] gi|319930371|gb|ADV85235.1| lysine 2,3-aminomutase [Vibrio vulnificus MO6-24/O] Length = 340 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 162/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + ++ + + NPNDP+ RQ + Sbjct: 19 QLAN-GISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE I P DP+ + + + G++H+Y +R L+ + C + CR+CFRR Sbjct: 78 PVSEEHEIHPGYSVDPL-EEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + S + EVIF+GGDPL+ LQ +++ + I H++ LR H Sbjct: 135 QDNKGSKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERIADIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL Q L++ V + H NH E + E + + RL G+ LL+Q Sbjct: 195 SRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHRLKRIGVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND E +L + + PYYLH D G +HF ++ +E + I+ L ++ Sbjct: 255 VLLKGVNDSVEAQVHLSEALFDAGVLPYYLHVLDKVQGAAHFYVSDQEAKAIMRGLITQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D + Sbjct: 315 SGYLVPTLTREIGGRPSKTPLDLY 338 >gi|269962491|ref|ZP_06176840.1| conserved hypothetical protein [Vibrio harveyi 1DA3] gi|269832787|gb|EEZ86897.1| conserved hypothetical protein [Vibrio harveyi 1DA3] Length = 340 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 94/324 (29%), Positives = 160/324 (49%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAKLLEMLEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE + DP+ + + L G++H+Y +R L+ + C V CR+CFRR + Sbjct: 78 PLSEEFEVHEGYSNDPL-EEQDNELPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + I H++ LR H Sbjct: 137 NKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAKIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL L+ + + + H NH E + E A +++L AG+ LL+Q Sbjct: 195 SRLPVVIPARITDELCHLLRASRLQIVLVTHINHANEINAEFAAQMAKLKQAGVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLK +N+ E L + I PYYLH D G +H+ ++ EE ++I+ + ++ Sbjct: 255 VLLKDVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEAKEIMRGVITRV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|37681287|ref|NP_935896.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016] gi|37200038|dbj|BAC95867.1| lysine 2;3-aminomutase [Vibrio vulnificus YJ016] Length = 340 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 102/324 (31%), Positives = 162/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + ++ + + NPNDP+ RQ + Sbjct: 19 QLAN-GISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE I P DP+ + + + G++H+Y +R L+ + C + CR+CFRR Sbjct: 78 PVSEEHEIHPGYSVDPL-EEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + S + EVIF+GGDPL+ LQ +++ + I H++ LR H Sbjct: 135 QDNKGSKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERIADIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL Q L++ V + H NH E + E + + RL G+ LL+Q Sbjct: 195 SRLPVVIPARITTELCQLLEQTRLQVILVTHINHANEINAELTSQLHRLKRIGVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND E +L + I PYYLH D G +HF ++ +E + I+ L ++ Sbjct: 255 VLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQEAKAIMRGLITQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D + Sbjct: 315 SGYLVPTLTREIGGRPSKTPLDLY 338 >gi|268590834|ref|ZP_06125055.1| KamA family protein [Providencia rettgeri DSM 1131] gi|291313616|gb|EFE54069.1| KamA family protein [Providencia rettgeri DSM 1131] Length = 342 Score = 393 bits (1011), Expect = e-107, Method: Composition-based stats. Identities = 95/325 (29%), Positives = 163/325 (50%), Gaps = 4/325 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q + +T+ +L ++ + E E + + + + + +P DP+ Q Sbjct: 17 QQLAEAITNPDELLQILNLENHLLSKEGSEARKLFPLRVPMPFISRMKKGDPLDPLLLQV 76 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 + K E +I P DP+ + + + ++H+Y +R LL + C V CR+CFRR Sbjct: 77 LTAKAEFDIHPGFSTDPL-EEQDNEIPSLLHKYHNRALLLVKGGCAVNCRYCFRRHFPY- 134 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + A+ YI+ +++ E+IF+GGDPL+ L ++ L I H+Q LR Sbjct: 135 -EDNKGNKNNWLMAVDYIKNHTELNEIIFSGGDPLMAKDHELDWLISQLEAIPHIQRLRI 193 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 H+R+P+V P+RI L + L + V + H NH E E A+ +L +G+ LL+Q Sbjct: 194 HTRLPVVIPERITETLCKRLASSRLQVIMVTHVNHANEIDESFTNAMQKLKLSGVTLLNQ 253 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+ +ND+ L NL + I PYYLH D G +HF ++ E ++++ L K Sbjct: 254 SVLLRQVNDNVTALMNLSNALFDTGILPYYLHVLDKVQGAAHFLVSDTEARQLIQQLLSK 313 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325 +SG P ++ G K +D + Sbjct: 314 VSGYLVPKLAREIGGEPSKTLLDLN 338 >gi|325970648|ref|YP_004246839.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy] gi|324025886|gb|ADY12645.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta sp. Buddy] Length = 363 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 128/349 (36%), Positives = 199/349 (57%), Gaps = 3/349 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q + +TS + L + +++ +++N + + NLI+P++P+DPI RQ + Sbjct: 4 QQQSTIITSKETLGQYLALAEDEWLFDADLTNTLPLKIPMYFLNLIDPNDPDDPIRRQVV 63 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P+ +E IL EE+ DP+ + N+S + ++HRY R+ VCP+YCR CFRR G+ Sbjct: 64 PRWQEQRILDEEQLDPLCEVNYSVTERLIHRYQSRVAFLTTDVCPLYCRHCFRRRFTGTF 123 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 +G S + E A Y+ + E++FTGGD LS K L+ +++T R + ++R Sbjct: 124 QG-PASKEQIEKAAEYVAVHPAVKEILFTGGDVFTLSTKALEAMIQTFRDKRPDLVIRLC 182 Query: 182 SRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P P RI+ +LI LK+ P Y+ NH E +E+AI A+ +AGI ++Q Sbjct: 183 SRMPASYPMRIDADLIAMLKQFNTAPFYLMTQFNHRRELTEQAIQAVRMFVDAGIPAMNQ 242 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 +VLLKG+NDD +L L T V RIKPYYL DL +GT+HFR+ ++EG I A L+++ Sbjct: 243 TVLLKGVNDDVCVLEELCNTLVFNRIKPYYLFQGDLVSGTAHFRVPLKEGLAIEAELRKR 302 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKV-GNGSYCITDHHNIVHDYP 348 +SGL P Y +DLP G GKV + + + G G + + YP Sbjct: 303 LSGLAMPLYAIDLPQGGGKVPLMQGYLSEQSGCGLWSFRTVEGEIRTYP 351 >gi|86147223|ref|ZP_01065538.1| lysine 2;3-aminomutase [Vibrio sp. MED222] gi|85834938|gb|EAQ53081.1| lysine 2;3-aminomutase [Vibrio sp. MED222] Length = 340 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 94/324 (29%), Positives = 155/324 (47%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L A I + +S+ + + NP+DP+ RQ + Sbjct: 19 QLSN-AISDPTKLLEALEIDPTPWQKGFAARELFSLRVPLSFVERMEKGNPHDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE ++ DP+ + ++ + G++H+Y R L+ + C + CR+CFRR Sbjct: 78 PLSEEFDVHQGYSADPLEEQENA-IPGLLHKYKSRALMIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L Y+ + +I EVI +GGDPL+ L+ ++ + I HV+ +R H Sbjct: 135 QDNKGSKSVWQTSLDYVAQHPEINEVILSGGDPLMAKDSELEWLINAIEQIPHVKTVRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P R+ EL Q L V + H NH E + E A +L G LL+Q Sbjct: 195 SRLPVVIPARVTDELCQTLANTRLKVVMVSHINHANEINLELKQAFHKLKQTGATLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 V+LKG+N+ L L + I PYY+H D G +HF ++ EE + L ++ Sbjct: 255 VMLKGVNNSASSLKKLSEKLFDAGILPYYMHVLDKVQGAAHFYISDEEAKHHFKGLISEV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D + Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLN 338 >gi|238756148|ref|ZP_04617468.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC 29473] gi|238705622|gb|EEP98019.1| Uncharacterized kamA family protein yjeK [Yersinia ruckeri ATCC 29473] Length = 334 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 93/318 (29%), Positives = 161/318 (50%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + ++ + + + + + + DP+ Q + +EE Sbjct: 15 ITDPDELLCLLALNEHAELRQGTAARRLFPLRVPRAFVARMRSGDAKDPLLLQVLTAREE 74 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 +P +DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 75 FIAVPGFTDDPLDEQR-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + AL YI + ++ E+IF+GGDPL+ L ++ L I H++ LR H+R+P+ Sbjct: 132 NKANWQQALDYIAQHPELDEIIFSGGDPLMAKDHELDWLITQLENIAHIKRLRIHTRLPV 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L ++ V + H NHP E + +++RL AG+ LL+QSVLL+ Sbjct: 192 VIPARITSTLCQRLLDSRLQVLLVTHINHPNEIDQSLCDSMARLKQAGVTLLNQSVLLRD 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +N+DP++LA L I PYY+H D G +HF + +E + ++ L ++SG Sbjct: 252 VNNDPDVLAALSHALFNAGILPYYIHVLDKVQGAAHFMVDDDEARLLIKGLLSRVSGYLV 311 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 312 PRLAREIGGEPSKTPLDL 329 >gi|188535099|ref|YP_001908896.1| hypothetical protein ETA_29810 [Erwinia tasmaniensis Et1/99] gi|188030141|emb|CAO98027.1| Conserved hypothetical protein [Erwinia tasmaniensis Et1/99] Length = 342 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 96/296 (32%), Positives = 154/296 (52%), Gaps = 3/296 (1%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 + +++ + A + +P DP+ Q I ++E P DP+ + + S + G+ Sbjct: 46 DARRLFALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +H+Y +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIF 162 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL+ L ++ L +I H++ LR HSR+P+V P+RI L Q L ++ + Sbjct: 163 SGGDPLMAKDHELDWLIAQLEHIPHIKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLM 222 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 H NH E +E + L AG+ LL+QSVLL+ INDD LA L + I PY Sbjct: 223 VTHINHAQEIDDELRHGMRMLKRAGVTLLNQSVLLRDINDDAVTLAALSNALFDAGILPY 282 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 YLH D G +HF ++ E + IV L +SG P ++ G K +D Sbjct: 283 YLHVLDKVQGAAHFYVSDERARAIVRELLTNVSGYMVPKLAREIGGEPSKTPLDLQ 338 >gi|209696199|ref|YP_002264129.1| hypothetical protein VSAL_I2793 [Aliivibrio salmonicida LFI1238] gi|208010152|emb|CAQ80477.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238] Length = 340 Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 160/319 (50%), Gaps = 3/319 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++ L + I ++ E +++ + + + NP DP+ RQ +P +E Sbjct: 23 AISDPHQLLSTLGIDSSPWEKGLEAKKLFALRVPTSFVDRMEFGNPFDPLLRQVLPLDQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + ++ G++H+Y +R+LL L C V CR+CFRR + Sbjct: 83 FEVHDGYSTDPLDEQDNEQ-PGLLHKYKNRVLLILKGGCAVNCRYCFRRHFPY--EDNKG 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ YI ++ EVI +GGDPL+ L+ +++ L + H++ LR HSR+P+ Sbjct: 140 GKSVWQNSINYIAAHPELNEVILSGGDPLMAKDHELEWLIQHLDKVPHIKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L + E V + H NH E S +++L A + LL+QSVLLKG Sbjct: 200 VIPNRITDTLCRLFAETRLQVILVTHINHANEISPYFTDKMTQLKQANVTLLNQSVLLKG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND + L NL + I PYYLH D G +HF ++ E+ ++++A L E +SG Sbjct: 260 INDTSKALTNLSEALFDAGILPYYLHVLDKVQGAAHFFVSDEKAKELMAELIENVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D + Sbjct: 320 PTLAREIGGRKSKTPLDLY 338 >gi|312882797|ref|ZP_07742531.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122] gi|309369581|gb|EFP97099.1| lysine 2,3-aminomutase [Vibrio caribbenthicus ATCC BAA-2122] Length = 340 Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 99/324 (30%), Positives = 167/324 (51%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ + L I + ++ + + + NPNDP+ RQ + Sbjct: 19 QLAN-GISDPETLLKQLQIDPQPWSAGFRARKLFAQRVPQSFIDRMEKGNPNDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P +E NI PE DP+ + + + G++H+Y +R+L+ + C + CR+CFRR S+ Sbjct: 78 PLIDEFNIHPEYSSDPL-EEQSNEIPGLLHKYHNRVLMIVKGGCAINCRYCFRRHFPYSE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + +L YI +I EVI +GGDPL+ L+ + + I HV+ LR H Sbjct: 137 NKG--TKSVWQQSLRYISLHKEIDEVILSGGDPLMAKDDELRWLFSEIAKISHVKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI ELI+ ++ + H NH E + E A+ +L A + LL+Q Sbjct: 195 SRLPVVIPARITSELIELIENNRLTTILVTHVNHANEINIELKQALQKLKAANVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 V+LKG+ND+ + L +T + + PYY+H D G +HF ++ + ++I+A L E++ Sbjct: 255 VMLKGVNDNADAQVQLSQTLFDAGVMPYYMHVLDKVQGATHFFISDQRAREIMAELIERV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREVGGRKSKTPLDLH 338 >gi|84386955|ref|ZP_00989979.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01] gi|84378245|gb|EAP95104.1| lysine 2;3-aminomutase [Vibrio splendidus 12B01] Length = 340 Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 93/324 (28%), Positives = 155/324 (47%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L A I +++ + + NP+DP+ RQ + Sbjct: 19 QLSN-AISDPSKLLEALEIDPTPWQAGFAARELFALRVPLSFVERMEKGNPHDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE + DP+ + ++ + G++H+Y +R L+ + C + CR+CFRR Sbjct: 78 PLNEEFEVHQGYSADPLEEQENA-IPGLLHKYKNRALMIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L Y+ + +I EVI +GGDPL+ L+ ++ + I HV+ +R H Sbjct: 135 QDNKGSKSVWQTSLDYVTQHPEINEVILSGGDPLMAKDSELEWLINAIEQIPHVKTVRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P R+ EL Q L V + H NH E + E A +L G LL+Q Sbjct: 195 SRLPVVIPARVTDELCQLLANTRLNVVMVSHINHANEINLELKQAFHKLKQTGATLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 V+LKG+N+ L L + + PYY+H D G +HF ++ EE ++ L ++ Sbjct: 255 VMLKGVNNSANSLKELSENLFDAGVLPYYMHVLDKVQGAAHFYISDEEAKRHFKGLISEV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRSSKTPLDLH 338 >gi|258625680|ref|ZP_05720559.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258581918|gb|EEW06788.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 340 Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 162/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPAQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLGAEFEAHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPL+ L +++ + I H++ LR H Sbjct: 135 EDNKGSKVIWQQSLDYIAQNPQLNEVIFSGGDPLMAKDHELAWLVERIATIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + V + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITDELVELFAQTRLQVLLVTHINHANEINLELKQQMARLRAINVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+N+ E L T + I PYYLH D G +HF + +E ++I+A L E++ Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVGDDEARQIMAGLIERV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGKPSKTPLDLH 338 >gi|92114650|ref|YP_574578.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043] gi|91797740|gb|ABE59879.1| L-lysine 2,3-aminomutase [Chromohalobacter salexigens DSM 3043] Length = 356 Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 100/323 (30%), Positives = 162/323 (50%), Gaps = 3/323 (0%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + +L + + + + + + I P +P+DP+ RQ Sbjct: 35 WQAQLRDAVRDPHELCRRLDLDTAWLGGAETGHALFPVRVPHAYLARIRPGDPDDPLLRQ 94 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E + DP+ + H P G++H+Y +R+LL C + CR+CFRR Sbjct: 95 VLPLDRESEPVAGFVGDPLEEAEHRPRPGLIHKYRNRVLLIASPACAINCRYCFRRHFPY 154 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 ++ S E L Y+++ + I E IF+GGDPL +RL + + L I H++ LR Sbjct: 155 AEN--SPSRGQWETTLDYLRQDTSINEAIFSGGDPLASPDRRLAWLAERLADIPHLKRLR 212 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P R++ L+ L + +H NHP E A+ RL AG+ LL+ Sbjct: 213 LHTRLPVVIPDRVDSPLLDWLAATRLQTVMVVHINHPNEIDAGVADAMQRLRGAGVTLLN 272 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+G+NDD E LA L E+ I PYYLH D G +HF + E +V +L+ Sbjct: 273 QSVLLRGVNDDVETLARLSERLFEVGILPYYLHVLDPVEGAAHFDVPDAEAVSLVETLRT 332 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 +++G P + ++PG K + Sbjct: 333 QLAGFLMPRLVREVPGEASKTPL 355 >gi|332140129|ref|YP_004425867.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327550151|gb|AEA96869.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 341 Score = 392 bits (1009), Expect = e-107, Method: Composition-based stats. Identities = 107/319 (33%), Positives = 164/319 (51%), Gaps = 3/319 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + T L + +E+ + + + + + A+L+ NPNDP+ Q +P +E Sbjct: 23 SFTDPAKLLQHLGLDEEKYAQHIKARRLFPMRVPRHFADLMEKGNPNDPLFLQVMPLSDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P EDP+ + + + KGI+H+Y R+LL + C V CR+CFRR + + Sbjct: 83 FLTSPGYSEDPL-EEHDTAGKGILHKYDSRVLLMVRTGCAVNCRYCFRRHFPYA--DNAV 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S E L YIQ I EVIF+GGDPL+ L + + I HV+ LR H+R+P+ Sbjct: 140 SKHQWEEVLQYIQAHDNINEVIFSGGDPLMAKDDHLAWLANEIASINHVKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+RIN + + +HANH E SE + + L G+ LL+QSVLLKG Sbjct: 200 VLPERINNAFVNWFTALPIQKVLVLHANHANEMSEALKSRLITLREKGVTLLNQSVLLKG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND E +++L E + PYYLH D G SHF ++ +EG+ I+ +++ G Sbjct: 260 VNDSGEAISDLSEALFEASVLPYYLHVLDKVQGASHFYVSDDEGRHIMEEAIKRLPGFLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P + ++ G GK ID H Sbjct: 320 PKLVREIGGQPGKTPIDLH 338 >gi|262401937|ref|ZP_06078502.1| lysine 2,3-aminomutase [Vibrio sp. RC586] gi|262351909|gb|EEZ01040.1| lysine 2,3-aminomutase [Vibrio sp. RC586] Length = 340 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 99/324 (30%), Positives = 163/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-AISDPLQLLQQLEIDPSPWQDGFEARKLFAQRVPQSFVDRMQKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E + P DP+ + N++ + G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLGAEFEVHPGYSNDPLDEQNNA-IPGLLHKYQNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + Q+ EVIF+GGDPLI L +++ + I H++ LR H Sbjct: 135 EDNKGSKAIWQQSLDYIAQNPQLNEVIFSGGDPLIAKDHELAWLIERIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ + + + H NH E + E ++RL + LL+Q Sbjct: 195 SRLPVVIPARITEELVELFAQTRLQILLVTHINHANEINLELKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+N+ E L T + I PYYLH D G +HF ++ +E ++++ L E++ Sbjct: 255 VLLKGVNNSVEEQVALSETLFDAGILPYYLHVLDKVQGAAHFYVSDDEARQLMGGLIERV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGKPSKTPLDLH 338 >gi|212710982|ref|ZP_03319110.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM 30120] gi|212686150|gb|EEB45678.1| hypothetical protein PROVALCAL_02051 [Providencia alcalifaciens DSM 30120] Length = 342 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 97/325 (29%), Positives = 166/325 (51%), Gaps = 4/325 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q + +T+ +L ++ Q E E + + + + + +P DP+ Q Sbjct: 17 QQLAEAVTNPDELLQLLNLEDHQPSREGHEARKLFPLRVPHPFISRMKKGDPLDPLLLQV 76 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 + K E +I P DP+ + + + ++H+Y +R L+ + C V CR+CFRR Sbjct: 77 LTAKAEFDIHPGFSTDPL-EEQDNAIPSLLHKYRNRALMLVKGGCAVNCRYCFRRHFPY- 134 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + + + A+ YI+ S++ E+IF+GGDPL+ L ++ L I H+ LR Sbjct: 135 -EDNKGNKNNWLMAVDYIKNHSELNEIIFSGGDPLMAKDHELDWLISQLEEIPHITRLRI 193 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 HSR+P+V P+RI L Q L ++ V + H NH E +E A+ +L +G+ LL+Q Sbjct: 194 HSRLPVVIPERITDTLCQRLTQSRLHVIMVTHVNHANEIDDEFAQAMLKLKRSGVTLLNQ 253 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL+ +ND+ LANL ++ I PYYLH D G +HF ++ E ++++ L + Sbjct: 254 SVLLRQVNDNVTALANLSNALFDVGILPYYLHVLDKVQGAAHFLVSDLEARQLIRELLSQ 313 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTH 325 +SG P ++ G K +D + Sbjct: 314 VSGYLVPKLAREIGGEPSKTLLDLN 338 >gi|110835306|ref|YP_694165.1| hypothetical protein ABO_2445 [Alcanivorax borkumensis SK2] gi|110648417|emb|CAL17893.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 363 Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 166/323 (51%), Gaps = 4/323 (1%) Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + +T +L + E + + + + + + L+ NP+DP+ RQ Sbjct: 42 WQRQQADLITDPAELLAMLDLPVESLPDALSAATDFPLRVPRSYVALMERGNPHDPLLRQ 101 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + +E+ P DP+ + H+ + G++H+Y R LL + C V+CR+CFRR Sbjct: 102 VLSVADEMVAQPGFSADPLDEAEHTAVPGLLHKYHGRALLVVTGACAVHCRYCFRRHFPY 161 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 T LS K + AL ++ + I EVI +GGDPL LS++RL+++L L I H++ LR Sbjct: 162 Q---THLSGKRWKQALEWLAARPDINEVILSGGDPLTLSNQRLEQLLDALESIPHLRRLR 218 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR P+V P+R+ L L + +H NHP E S + L +AGI LL+ Sbjct: 219 IHSRTPVVIPERLEVGLKALLTWRRWQTVLVLHGNHPREISPALVERCRDLRSAGITLLN 278 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL G+ND + LA L + + PYYLH D G +HF ++ E ++I A+L+ Sbjct: 279 QSVLLAGVNDRADTLAELSDRLFDAGVMPYYLHQLDAVQGAAHFAVSDEAAREIHAALRA 338 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++ G P + PG K + Sbjct: 339 RLPGFLVPRLTREEPGEPAKTVL 361 >gi|153834930|ref|ZP_01987597.1| lysine 2;3-aminomutase [Vibrio harveyi HY01] gi|148868610|gb|EDL67696.1| lysine 2;3-aminomutase [Vibrio harveyi HY01] Length = 340 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 95/324 (29%), Positives = 161/324 (49%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAKLLEMLEIDPSPWLDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE + DP+ + + L G++H+Y +R L+ + C V CR+CFRR + Sbjct: 78 PLSEEFEVHEGYSNDPL-EEQDNELPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + I H++ LR H Sbjct: 137 NKS--GKQAWTKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAQIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL Q L+ + + + H NH E + E A +++L AG+ LL+Q+ Sbjct: 195 SRLPVVIPARITDELCQLLRASRLQIVLVTHINHANEINAEFAAQMAKLKQAGVTLLNQA 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLK +N+ E L + I PYYLH D G +H+ ++ EE + I+ + ++ Sbjct: 255 VLLKNVNNSIEAQVALNEALFDAGILPYYLHVLDKVQGAAHYFVSDEEAKAIMRGVITQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|301154946|emb|CBW14409.1| predicted lysine aminomutase [Haemophilus parainfluenzae T3T1] Length = 340 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 97/318 (30%), Positives = 151/318 (47%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L + E E +++ + + NP DP+ Q + Sbjct: 22 LKN-AISDPKILLKTLNLPVEDFAEDIAARKLFAMRVPLPFVEKMEKGNPKDPLFLQVMT 80 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 ++E +DP+ + + + I+H+Y +R+L C V CR+CFRR Q Sbjct: 81 AQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDQN 140 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + + A+ YI +I EVIF+GGDP++ +L+ L I H+Q LR HS Sbjct: 141 PG--NKTSWQQAIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERLEKIPHLQRLRIHS 198 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V P+RI E L ++ H NHP E EE A+ +L A + LL+QSV Sbjct: 199 RLPVVIPERITDEFCDLLLKSPLQTVFVTHINHPNEIDEELALAMQKLVGAKVTLLNQSV 258 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLK +ND+P L L + I PYYLH D G SHF ++ E+ +I L+ S Sbjct: 259 LLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDEKALQIYKELQALTS 318 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 319 GYLVPKLAREIGGEPNKT 336 >gi|183221183|ref|YP_001839179.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911274|ref|YP_001962829.1| lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775950|gb|ABZ94251.1| Lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779605|gb|ABZ97903.1| L-lysine 2,3-aminomutase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 402 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 115/331 (34%), Positives = 182/331 (54%), Gaps = 7/331 (2%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL+++ +DL ++ + I+ ++ TP +L +P +PN PI R + Sbjct: 29 QLQNRV--KGEDLARYFVLSDSERVGIQNTIRLL-VSTTPYYLSLSDPSDPNCPIRRMIV 85 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P KEE EE DP+ + SP++G+ H YP+R+LL H C VYCR C R V S Sbjct: 86 PTKEEAIFSLEESADPLEEERLSPVRGLTHMYPNRVLLFSNHSCSVYCRHCMRGRKVSSN 145 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + D E+A YI+ +I +V+ +GGDPL L+ R++ +LK L I HV+I R Sbjct: 146 EE-RMEKSDLESAFDYIRNHPEIEDVVVSGGDPLNLADLRIEWILKELNQIPHVKICRLG 204 Query: 182 SRVPIVDPQRINPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 +R P+ P RI + Q +++ ++ NHP E ++E AI +L G+ + Sbjct: 205 TRNPVTLPFRITDAICQIIEKYNDDNLSIFCNTQFNHPKECTKETKEAILKLLKVGVSVG 264 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKGINDD E + L + +E+R++ YYL+ P+L G+ FR + G +IV ++ Sbjct: 265 NQAVLLKGINDDEETMLTLHKKLLEMRVRAYYLYDPELIPGSRGFRTPLARGIEIVEYMR 324 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 KI G+ P ++ DLPGG GK+ I + Sbjct: 325 GKIGGMGIPQFVNDLPGGGGKITIGANWYLG 355 >gi|296535943|ref|ZP_06898093.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957] gi|296263737|gb|EFH10212.1| lysine 2,3-aminomutase [Roseomonas cervicalis ATCC 49957] Length = 683 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 152/347 (43%), Positives = 208/347 (59%), Gaps = 1/347 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 +L+ +TL A L A L ++ + Y+IALTP + LI+ +P DPIARQ++ Sbjct: 337 RLKPRTLRDAAALVEAGLAPASAQPALEALQQVYAIALTPAVQALIDRADPADPIARQYV 396 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EL LP ER DP D +P+KG+VHRYPDR LLK L CPVYCRFCFRRE+VG Sbjct: 397 PDPAELVTLPRERSDPTSDAPFTPVKGVVHRYPDRALLKPLLACPVYCRFCFRREVVGPD 456 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 G +LS + EAAL + Q+ E I TGGDPL+LS +RL +L L I H+ I+R H Sbjct: 457 GG-LLSEPELEAALDWFARTPQVREAILTGGDPLMLSPRRLAHILARLSSIPHLDIIRLH 515 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +RVP+ P+R+ L L K +++ +HANH EFS A A++RL AG+ LL QS Sbjct: 516 TRVPVAAPERVTAALADTLAATDKALFLCVHANHAREFSAGARTALTRLRRAGVALLGQS 575 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+ND + LA L R + ++KPYYLH D A GT+ F + IE+G+ I+ +L+ + Sbjct: 576 VLLRGVNDSADALAALFRAMLAAQVKPYYLHQLDRAPGTARFEVPIEQGRAILRALRGTL 635 Query: 302 SGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 +GL P Y+LDLPGG GK + + G + +P Sbjct: 636 TGLAWPAYVLDLPGGAGKAPLGPDFARAEGADWLVEGPLDGVAQRHP 682 >gi|116751432|ref|YP_848119.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116700496|gb|ABK19684.1| L-lysine 2,3-aminomutase [Syntrophobacter fumaroxidans MPOB] Length = 360 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 122/336 (36%), Positives = 183/336 (54%), Gaps = 6/336 (1%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72 L + + E+ Y LI DP+ RQ +P EL+ Sbjct: 13 TLQALSRDPGADGAALSEVVRRYPFRTNEYYQGLIRQTG--DPLWRQVMPDAMELSDDAG 70 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 +DP+ + SP+ +VHRYP+R+L + H C ++CRFC R+ S ++ + Sbjct: 71 -LQDPLAEEALSPVPNLVHRYPNRVLWLVSHECALHCRFCTRKRRWSS--PLPMTGELLR 127 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 L YI+E Q+ +V+ +GGDPL+L RL+ +L LR+I HV +LR +RVP P+R+ Sbjct: 128 DGLRYIRENPQVNDVLLSGGDPLLLDPSRLETILGELRHIPHVAVLRIGTRVPCALPERV 187 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 EL L P+++ IH NHP E +EE+ A + LA+AGI L SQ+VLL+ +NDD Sbjct: 188 TGELATMLARH-HPLFLNIHFNHPREITEESRRACALLADAGIPLGSQTVLLRDVNDDAH 246 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 +L L +T + LR++PYYL DL GT+HFR + G +IVA L+ +ISG+ P ++D Sbjct: 247 VLGELFQTLLGLRVRPYYLMQMDLTRGTAHFRTPLSRGLEIVARLRNRISGMAVPQLVVD 306 Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 LPGG GKV + + I+ +G + YP Sbjct: 307 LPGGLGKVPLVPNRIEHIGEDHVVFRSYQGAPCRYP 342 >gi|330991009|ref|ZP_08314963.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1] gi|329761830|gb|EGG78320.1| L-lysine 2-3-aminomutase [Gluconacetobacter sp. SXCC-1] Length = 359 Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats. Identities = 148/342 (43%), Positives = 217/342 (63%), Gaps = 4/342 (1%) Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 +TL S DL A L+ Q+ +++++ HY+ A+ P A+LI P+DPI RQ IP Sbjct: 16 SRTLRSVTDLLAAGLVTPAQVPALEDVARHYATAIPPAFADLIET--PDDPIGRQVIPDG 73 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E++ E DPIGD+ SP+ GIVHRY DR LLK L VCP+YCRFCFRRE VG G+ Sbjct: 74 AEIHTDTTEDPDPIGDDALSPVPGIVHRYADRALLKPLLVCPLYCRFCFRREHVGP-GGS 132 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 VL E AL +++ + I EV+ TGGDPL+LS +R++ +++ L + H+ +R HSRV Sbjct: 133 VLDDAALEHALDWLRTHTGIHEVVMTGGDPLMLSARRMRAIMQALEGMDHIHTIRIHSRV 192 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 P+ DP R++ E+ L E + +++ +H NH E + +A AAI R+ I +L QSVLL Sbjct: 193 PVADPGRLDDEMADAL-ETTRSMWLVVHVNHARELTPQARAAIRRVQARAIPVLGQSVLL 251 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 +G+ND P+ L L+R V RI+PYYLH D A GT+ F + I EGQ+++ASL+ +++G+ Sbjct: 252 RGVNDTPQALEALLRAQVAARIRPYYLHQLDPAPGTARFHVPIREGQRLLASLRGRVTGI 311 Query: 305 CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHD 346 P Y+LD+PGG+GKV I + + +G+ T +H Sbjct: 312 AWPTYVLDIPGGHGKVPIAPGYLHEGPDGTLHATAPDGTIHR 353 >gi|260770856|ref|ZP_05879785.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972] gi|260614093|gb|EEX39283.1| lysine 2,3-aminomutase [Vibrio furnissii CIP 102972] Length = 340 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 95/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + + ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAQLLQQLGIDPQPWQNGFDARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE ++ P EDP+ + N++ + G++H+Y +R L+ + C + CR+CFRR + Sbjct: 78 PLSEEFDVHPGYSEDPLDEQNNA-VPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYAD 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 S + +L YI + ++ E+I +GGDPL+ + L +++ + I HV+ LR H Sbjct: 137 NKG--SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERIGAISHVKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P R+ EL+ L V + H NH E + ++RL + LL+Q Sbjct: 195 SRLPVVIPARVTDELVALLANTRLQVVLVTHINHANEINLALKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 V+LKG+ND L T + I PYY+H D G +HF ++ E + I++ L E++ Sbjct: 255 VMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSEAKAIMSGLLERV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPTLTREIGGRKSKTPLDLH 338 >gi|114327751|ref|YP_744908.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1] gi|114315925|gb|ABI61985.1| lysine 2,3-aminomutase [Granulibacter bethesdensis CGDNIH1] Length = 362 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 150/340 (44%), Positives = 208/340 (61%), Gaps = 10/340 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 ++L S DL A LI E ++ ++ Y+IA+ P + LI + +DPI Q IP Sbjct: 25 RSLRSLADLRRAGLIDDE--APLQAVAAQYAIAIPPAMQALI--TDRHDPIGLQVIPDPA 80 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E+ P E DPIGD+ SP+ GIVHRYPDR LLK L +CPVYCRFCFRRE VG G V Sbjct: 81 EMITAPYENVDPIGDDALSPVPGIVHRYPDRALLKPLLICPVYCRFCFRREHVGPDGG-V 139 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 LS + AL ++ QI EVI TGGDPL+LS +RL ++ L I H+ I+R HSRVP Sbjct: 140 LSEEQLRIALDWLAGHPQIREVILTGGDPLMLSPRRLSFIINELNNIPHIDIIRIHSRVP 199 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + DP + ++ L E K +++ +H N+ E ++ A +I GI +LSQ+VLL+ Sbjct: 200 VADPALVTQAMLDAL-ETDKAMFLVLHTNNVKELTDLAALSIQSFQRRGIPVLSQTVLLR 258 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND E L L R + LR+KPYYLH D A GT+ FR+ +EEG+ I+ +L+ +ISGL Sbjct: 259 GVNDSAEALEALYRRILRLRVKPYYLHQLDAAPGTARFRVPVEEGRAILHALRGRISGLA 318 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345 P Y++D+PGGYGKV +D ++ G + D + H Sbjct: 319 WPTYVIDIPGGYGKVPVDPDYLESDG----SVRDINGHRH 354 >gi|156972506|ref|YP_001443413.1| lysine 2;3-aminomutase [Vibrio harveyi ATCC BAA-1116] gi|156524100|gb|ABU69186.1| hypothetical protein VIBHAR_00138 [Vibrio harveyi ATCC BAA-1116] Length = 340 Score = 391 bits (1006), Expect = e-107, Method: Composition-based stats. Identities = 94/324 (29%), Positives = 160/324 (49%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAKLLEMLEIDPSPWQDGFAARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE + DP+ + + L G++H+Y +R L+ + C V CR+CFRR + Sbjct: 78 PLSEEFEVHEGYSNDPL-EEQDNELPGLLHKYRNRALMIVKGGCAVNCRYCFRRHFPYQE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + L Y+ ++ ++ EVIF+GGDPL+ + +L+ + I H++ LR H Sbjct: 137 NKS--GKQAWIKCLEYMAQQPELNEVIFSGGDPLMAKDDEIHWLLEHIAQIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL Q L+ + + + H NH E + E A +++L AG+ LL+Q Sbjct: 195 SRLPVVIPARITDELCQRLRASRLQIVLVTHINHANEINAEFAAQMAKLKQAGVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLK +N+ E L + I PYY+H D G +H+ ++ EE + I+ + ++ Sbjct: 255 VLLKDVNNSIEAQVALNEALFDAGILPYYVHVLDKVQGAAHYFVSDEEAKTIMRGVITRV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|332304891|ref|YP_004432742.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172220|gb|AEE21474.1| lysine 2,3-aminomutase YodO family protein [Glaciecola agarilytica 4H-3-7+YE-5] Length = 341 Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats. Identities = 99/326 (30%), Positives = 163/326 (50%), Gaps = 4/326 (1%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + T L + + + + + + A + NP+DP+ RQ Sbjct: 16 WQKVLSSAFTDPLALLKYLALDPAKFTDDIAARRLFPMRVPAPFAKRMEKGNPDDPLFRQ 75 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 P K+E N P DP+ + ++S G++H+Y R+LL + C V CR+CFRR Sbjct: 76 VFPSKKEFNSDPNYLLDPLQEQSNSK-PGVLHKYQSRVLLLVRGGCAVNCRYCFRRHFPY 134 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 S L+ ++ + L YI++ S+I EVI++GGDPL+ L + + + I H++ +R Sbjct: 135 S--DNHLNKQEWQETLDYIRQDSKINEVIYSGGDPLMAKDDFLAWLTEEIAQIDHIKRIR 192 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P RI PELI+ + + +H NHP E + + +L AG+ LL+ Sbjct: 193 IHTRLPVVIPSRITPELIKWFTQTRLKPIMVLHINHPQEIDQSLRDTLQKLTQAGVTLLN 252 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q VLLK IND + L + + + PYYLH D G HF + + I+A + + Sbjct: 253 QGVLLKDINDSADAQVALSESLFDAGVLPYYLHVMDKVQGAQHFDHEDKIAKDIMAQMIK 312 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325 ++ G P + ++ G GK ID + Sbjct: 313 RLPGFLVPKLVREIGGQPGKTPIDLN 338 >gi|330444985|ref|ZP_08308639.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328493103|dbj|GAA03136.1| kamA family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 340 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 97/318 (30%), Positives = 156/318 (49%), Gaps = 3/318 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++ L I + +++ + + + NP DP+ RQ +P +E Sbjct: 23 AISDPFTLLKLLKIDPTPWENGLAARKLFALRVPLSFVDKMEIGNPYDPLLRQILPLAQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + + + G++H+Y +R+LL + C V CR+CFRR S Sbjct: 83 FEVHQGYSVDPL-EEQQNEIPGLLHKYHNRVLLIVKGGCAVNCRYCFRRHFPYSDNKG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + +L YI +I EVI +GGDPL+ LQ +++ + I H++ LR HSR+P+ Sbjct: 140 NKRQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLIEHIAAIPHIKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L E + H NH E + A+ +L A + LL+Q VLLKG Sbjct: 200 VIPNRITDALCQILTETRLQTILVTHINHANEIDDALKTAMQKLKQANVTLLNQGVLLKG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND L +L T + I+PYYLH D G +HF + E ++++A L K+SG Sbjct: 260 VNDSVAALTDLSETLFDAGIQPYYLHVLDRVQGAAHFMVDDEIARQLMAGLITKVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PKLTREIGGRASKTPLDL 337 >gi|27364664|ref|NP_760192.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6] gi|27360809|gb|AAO09719.1| Lysine 2,3-aminomutase [Vibrio vulnificus CMCP6] Length = 340 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 161/324 (49%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + ++ + + NPNDP+ RQ + Sbjct: 19 QLAN-GISDPATLLKMLEIDPTPWQDGFSARGLFAQRVPQSFVERMEKRNPNDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE I P DP+ + + + G++H+Y +R L+ + C + CR+CFRR Sbjct: 78 PVSEEHEIHPGYSVDPL-EEQDNAIPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YI + S + EVIF+GGDPL+ LQ +++ + I H++ LR H Sbjct: 135 QDNKGSKTVWQQSLDYIAQNSALNEVIFSGGDPLMAKDDELQWLIERIADIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI L Q L++ V + H NH E + E + + RL G+ LL+Q Sbjct: 195 SRLPVVIPARITTALCQLLEQTRLQVILVTHINHANEINAELTSQLHRLKRIGVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND E +L + I PYYLH D G +HF ++ +E + I+ L ++ Sbjct: 255 VLLKGVNDSVEAQVHLSEALFDAGILPYYLHVLDKVQGAAHFYVSDQEAKAIMHGLITQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D + Sbjct: 315 SGYLVPTLTREIGGRPSKTPLDLY 338 >gi|239994935|ref|ZP_04715459.1| lysine 2,3-aminomutase YodO family protein [Alteromonas macleodii ATCC 27126] Length = 341 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 102/319 (31%), Positives = 169/319 (52%), Gaps = 3/319 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + T L + +E+ + + + + + +L+ NPNDP+ Q +P +E Sbjct: 23 SFTDPAKLLQHLGLDQEKYAQHIKARRLFPMRVPRHFVDLMEKENPNDPLFLQVMPLSDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P EDP+ ++ + KGI+H+Y R+LL + C V CR+CFRR + + Sbjct: 83 FLTSPGYSEDPLDEH-DTAGKGILHKYDSRVLLMVRTGCAVNCRYCFRRHFPYA--DNAV 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S L Y++ ++I EVIF+GGDPL+ + L + + I H++ LR HSR+P+ Sbjct: 140 SKHQWLDVLEYLRSNNKINEVIFSGGDPLMAKDEHLSWLANEITTIPHIKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+RI+ + ++ + +HANH E SE + + L G+ LL+QSVLLKG Sbjct: 200 VLPERISHDFVEWFTALPLQKVLVLHANHANEMSETLKSRLKTLRERGVTLLNQSVLLKG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + +++L T E + PYYLH D G SHF ++ +EG++I+ +++ G Sbjct: 260 VNDSGDAISDLSETLFEAGVLPYYLHVLDKVQGASHFYVSDDEGREIMEEAIKRLPGFLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P + ++ G GK ID H Sbjct: 320 PKLVREIGGQPGKTPIDLH 338 >gi|304413330|ref|ZP_07394803.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1] gi|304284173|gb|EFL92566.1| putative lysine aminomutase [Candidatus Regiella insecticola LSR1] Length = 338 Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats. Identities = 93/325 (28%), Positives = 156/325 (48%), Gaps = 14/325 (4%) Query: 11 AQDLYNANLIKKE-----------QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q L N E ++ + K + + + L+ + NDP+ RQ Sbjct: 16 LQQLANVITDPDELLQLLQLDTHPELPQGKSARRLFPLRVPRAFVALMRKGDANDPLLRQ 75 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + E + DP+ + + G++H+Y +R LL + C + CR+CFRR Sbjct: 76 VLTSSAEFISPEDFITDPLAEQR-TAAPGLLHKYGNRALLLVKGSCAINCRYCFRRHFPY 134 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + K+ + AL YI++ ++ E+IF+GGDPL+ + L ++ L I H++ LR Sbjct: 135 QDNQG--NKKNWQLALDYIRQHPELDEIIFSGGDPLMAKDRELSWLIDALEKIAHIKRLR 192 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P RI L Q + + + H NH E ++++L G+ LL+ Sbjct: 193 IHTRLPVVIPARITIALCQKFHASRLQIVLVTHINHANEIDNVLCDSMAKLKTKGVTLLN 252 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+G+ND+ E+LA L I PYYLH D G +HF + +E ++++ L Sbjct: 253 QSVLLRGVNDNVEVLAQLSNALFNAGILPYYLHVLDKVKGAAHFMVNDDEARRLINGLLG 312 Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324 ISG P + ++ G K + Sbjct: 313 CISGYLVPRLVREIAGEKSKTPLTL 337 >gi|260772045|ref|ZP_05880962.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14] gi|260612912|gb|EEX38114.1| lysine 2,3-aminomutase [Vibrio metschnikovii CIP 69.14] Length = 340 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 101/324 (31%), Positives = 160/324 (49%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ + L I + ++ + + NP+DP+ RQ + Sbjct: 19 QLAN-GISDPEQLLTQLAIDPSPWQSGFKARALFAQRVPQSFVERMEKGNPHDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P +E I P DP+ + N+S G++H+Y +R LL + C + CR+CFRR Sbjct: 78 PLSDEFIIHPGYSTDPLEEQNNS-TPGLLHKYRNRCLLIVKGGCAINCRYCFRRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + + +L YI + Q+ EVI +GGDPL+ L +++ + I H++ LR H Sbjct: 135 QDNKGNKLVWQQSLDYIAQHRQLNEVILSGGDPLMAKDHELGWLIEQIAAIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL+ E V + H NH E + E ++RL + LL+QS Sbjct: 195 SRLPVVIPARITDELVSLCAETRLQVILVTHINHANEINAELSQQLARLRAEKVTLLNQS 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND L + I PYYLH D G +HF ++ E+ + I+A L E++ Sbjct: 255 VLLKGVNDSVPAQVALSEALFDAGILPYYLHVLDKVQGAAHFYVSDEQARTIIAGLIEQV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLH 338 >gi|85058286|ref|YP_453988.1| hypothetical protein SG0308 [Sodalis glossinidius str. 'morsitans'] gi|84778806|dbj|BAE73583.1| conserved hypothetical protein [Sodalis glossinidius str. 'morsitans'] Length = 342 Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 160/318 (50%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T L ++ + E E + + A + +P+DP+ RQ I +EE Sbjct: 23 ITDPMQLLQLLRLEGHSGLREGAEARRLFPFRVPRAFAARMVTGDPDDPLLRQVITAREE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R L+ + C V CR+CFRR + Sbjct: 83 FDPTPGYSTDPLDEQ-HSVVPGLLHKYQNRALMLVKGGCAVNCRYCFRRHFPYQENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + A AYI++ ++ E+I +GGDPL+ L +++ L I H++ LR HSR+P+ Sbjct: 140 NKTNWLRAAAYIRQHPELNEIILSGGDPLMAKDHELDELICLLEEIPHLKTLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L V + H NH E +++RL NA + LL+QSVLL+G Sbjct: 200 VIPARITARLCQRLAGCRLKVVLVTHINHAREIDAALCDSMTRLRNARVTLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + LA L I PYYLH D G +HF + ++ ++I+ L EK+SG Sbjct: 260 VNDSADTLAALSEALFAAGILPYYLHVLDRVQGAAHFMVEDKQAREIMQQLLEKVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PRLAREIGGERSKTPLDL 337 >gi|262273034|ref|ZP_06050853.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886] gi|262222944|gb|EEY74250.1| lysine 2,3-aminomutase [Grimontia hollisae CIP 101886] Length = 340 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 95/319 (29%), Positives = 162/319 (50%), Gaps = 3/319 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++ Q L I+ N + + N + NP+DP+ RQ +P EE Sbjct: 23 AVSDPQILLQQLDIEPSSWTSGFSARNLFVQRVPQSFINRMEKGNPDDPLLRQVLPVIEE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + +P DP+ + + + G++H+Y +R+L+ + C + CR+CFRR + Sbjct: 83 FDEVPGFSTDPL-EEQGNDVPGLLHKYKNRVLMIVKGGCAINCRYCFRRHFPY--QDNKG 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 A+AY+Q+ ++ EVI +GGDPL+ LQ +++ + + H++ LR H+R+P+ Sbjct: 140 GKSTWREAIAYLQQHPEVDEVILSGGDPLMAKDHELQWLIEAIESVPHIKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P R+ L L + + + H NH E +E A ++ L +AG+ LL+Q VLL+G Sbjct: 200 VIPSRVTVTLANMLATSRLNIVLVTHINHANEIDDELRAVMATLKHAGVTLLNQGVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND E L NL + I PYYLH D G +HF + E + +++ L +++SG Sbjct: 260 VNDSVEALKNLSNRLFDAGILPYYLHVLDKVKGAAHFLVDDETARNLMSGLIKEVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D H Sbjct: 320 PRLTREIGGRDSKTPLDLH 338 >gi|315178899|gb|ADT85813.1| conserved hypothetical protein [Vibrio furnissii NCTC 11218] Length = 340 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 94/324 (29%), Positives = 162/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + + ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAQLLQQLGIDPQPWQNGFDARKLFAQRVPQSFIDRMEKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE ++ P EDP+ + N++ + G++H+Y +R L+ + C + CR+CFRR + Sbjct: 78 PLSEEFDVHPGYSEDPLDEQNNA-VPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYAD 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 S + +L YI + ++ E+I +GGDPL+ + L +++ + I H++ LR H Sbjct: 137 NKG--SKAVWQQSLDYIASQPELNEIILSGGDPLMAKDQELSWLIERIGAISHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P R+ EL+ L V + H NH E + ++RL + LL+Q Sbjct: 195 SRLPVVIPARVTDELVALLANTHLQVVLVTHINHANEINLALKQQMARLRAVNVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 V+LKG+ND L T + I PYY+H D G +HF ++ E + I++ L E++ Sbjct: 255 VMLKGVNDSVAAQVALSDTLFDAGILPYYMHVLDKVQGAAHFYISDSEAKAIMSGLLERV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPTLTREIGGRKSKTPLDLH 338 >gi|145636539|ref|ZP_01792207.1| thiamin transporter membrane protein [Haemophilus influenzae PittHH] gi|145270364|gb|EDK10299.1| thiamin transporter membrane protein [Haemophilus influenzae PittHH] Length = 338 Score = 389 bits (1001), Expect = e-106, Method: Composition-based stats. Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q + Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E DP+ + N + + I+H+Y +R+L C V CR+CFRR + Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+ Sbjct: 139 PG--NKKSWQLALDYIAAHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 317 GYLVPKLAREIAGEPNKT 334 >gi|310765349|gb|ADP10299.1| conserved uncharacterized protein [Erwinia sp. Ejp617] Length = 342 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 94/296 (31%), Positives = 153/296 (51%), Gaps = 3/296 (1%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 + +++ + A + +P DP+ Q I ++E P DP+ + + S + G+ Sbjct: 46 DARRLFALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +H+Y +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIF 162 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL+ L+ ++ L I H++ LR HSR+P+V P+RI L Q L ++ + Sbjct: 163 SGGDPLMAKDHELEWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLM 222 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 H NH E ++ + L AG+ LL+QSVLL+ IND LA L + I PY Sbjct: 223 VTHINHAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPY 282 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 YLH D G +HF ++ E + IV L +SG P ++ G K +D Sbjct: 283 YLHVLDKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLDLQ 338 >gi|323495128|ref|ZP_08100214.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546] gi|323310629|gb|EGA63807.1| lysine 2,3-aminomutase [Vibrio brasiliensis LMG 20546] Length = 340 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 93/324 (28%), Positives = 158/324 (48%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAKLLEQLEIDPTPWKNGFEARKLFAQRVPQSFVDRMEKGNPYDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE + DP+ + ++ + G++H+Y +R L+ + C + CR+CFRR + Sbjct: 78 PLSEEFEVHQGYSNDPL-EEQNNAIPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYDE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 S + +L YIQ+ +I E+I +GGDPL+ L ++ + I+H++ LR H Sbjct: 137 NKG--SKSVWQTSLDYIQQHPEIDEIILSGGDPLMAKDDELSWLVARIADIQHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI +L L + V + H NH E + A+ +L G+ LL+Q Sbjct: 195 SRLPVVIPARITEQLTDLLGQTRLQVILVTHINHAQEIDQTLANALDKLKQVGVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 V+LKG+ND L E + PYY+H D G +HF ++ ++ ++I+A + E+ Sbjct: 255 VMLKGVNDSVSSQIALSNALFEAGVLPYYMHVLDKVQGAAHFFISDQQAKEIMAGVLEQT 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRASKTPLDLH 338 >gi|259907161|ref|YP_002647517.1| hypothetical protein EpC_04800 [Erwinia pyrifoliae Ep1/96] gi|224962783|emb|CAX54238.1| conserved uncharacterized protein [Erwinia pyrifoliae Ep1/96] gi|283476968|emb|CAY72852.1| Uncharacterized kamA family protein TP_0121 [Erwinia pyrifoliae DSM 12163] Length = 342 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 94/296 (31%), Positives = 152/296 (51%), Gaps = 3/296 (1%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 + +++ + A + +P DP+ Q I ++E P DP+ + + S + G+ Sbjct: 46 DARRLFALRVPRAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +H+Y +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+IF Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIF 162 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL+ L ++ L I H++ LR HSR+P+V P+RI L Q L ++ + Sbjct: 163 SGGDPLMAKDHELDWLIGQLEQIPHLKRLRIHSRLPVVIPKRITEALCQRLAQSRLQTLM 222 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 H NH E ++ + L AG+ LL+QSVLL+ IND LA L + I PY Sbjct: 223 VTHINHAQEIDDDLRHGMHMLKRAGVTLLNQSVLLRDINDSAPALAALSNALFDAGILPY 282 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 YLH D G +HF ++ E + IV L +SG P ++ G K +D Sbjct: 283 YLHVLDKVQGAAHFYVSDERARAIVRELLTMVSGYMVPKLAREIGGEPSKTPLDLQ 338 >gi|238793387|ref|ZP_04637013.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC 29909] gi|238727356|gb|EEQ18884.1| Uncharacterized kamA family protein yjeK [Yersinia intermedia ATCC 29909] Length = 335 Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats. Identities = 97/318 (30%), Positives = 160/318 (50%), Gaps = 4/318 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + + E + + + + +P+DP+ Q + +EE Sbjct: 15 ITDPAELLRILSLNEHPNLQQGIEARRLFPLRVPRAFVARMRLGDPSDPLLLQVLTAREE 74 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 75 FIAAPGFTTDPLDEQR-SVVPGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L +L L I H++ LR H+R+P+ Sbjct: 132 NKANWHQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDELENIAHIKRLRIHTRLPV 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L + V + H NH E + ++++L AG+ LL+QSVLL+G Sbjct: 192 VIPDRITAALCQRLGDTRLQVLMVTHINHANEIDQPLRDSMAQLKRAGVTLLNQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD E+LA L + I PYY+H D G +HF + +E + ++ L ++SG Sbjct: 252 INDDAEVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEARLLMKGLLCRVSGYLV 311 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 312 PRLAREIGGELSKTPLDL 329 >gi|42524711|ref|NP_970091.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100] gi|39576921|emb|CAE78150.1| lysine 2,3-aminomutase [Bdellovibrio bacteriovorus HD100] Length = 428 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 116/347 (33%), Positives = 191/347 (55%), Gaps = 4/347 (1%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QLRH +L + D + ++ +++ TP A+L + I + Sbjct: 53 WQLRH-SLKTQDDFAQHFELSADEKAAFVGGKELFNVRTTPYYASLA-KGDAGQSIRQIL 110 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P + E+ ++ DP+G+ + ++HRY DR+L + +C VYCRFC R+ G Sbjct: 111 MPHRFEIEEGDQQMLDPLGERQNKAAPRLIHRYSDRVLFLITDICSVYCRFCTRKHFTGQ 170 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 ++ + + ++ E AL+YI+ + I EVI +GGDPL +S K+L +VL LR I+HV+I+R Sbjct: 171 EQAFIRN-EEYEQALSYIRSHTGIREVILSGGDPLTVSDKQLDRVLGDLRAIEHVEIIRI 229 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 SR+P+V P R+ +L+Q LK+ KPV++ H NHP E + EA+ A+ RL + G+ +++Q Sbjct: 230 GSRMPVVCPMRVTEDLVQILKKH-KPVFLMSHFNHPDELTAEAVEALERLVDNGVPVMNQ 288 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 VLL GIN+ P ++ L R + LR+KPYY+ D + GT H R ++E+ +I L Sbjct: 289 MVLLNGINNHPALVQALNRRLLFLRVKPYYMFQCDPSLGTDHLRTSVEDSLEIQKELWGH 348 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +SGL P LD+P G GK + + + + +Y Sbjct: 349 LSGLAMPNLSLDIPNGGGKTYLVPNFEVGQEGRTRHYVGWDGVKAEY 395 >gi|254784867|ref|YP_003072295.1| KamA family protein [Teredinibacter turnerae T7901] gi|237684557|gb|ACR11821.1| KamA family protein [Teredinibacter turnerae T7901] Length = 335 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 102/321 (31%), Positives = 168/321 (52%), Gaps = 3/321 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL ++ +T DL + + + + + + + + ++ + + P +PNDP+ Q + Sbjct: 17 QLTNQ-ITKPADLLSRLSLDNQWLPAAERAAALFPLRVSEAFVSRMRPGDPNDPLLLQVL 75 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE + P EDP+ + +P G++H+Y R+LL C + CR+CFRR Sbjct: 76 PLGEEFAVTPGYSEDPLEEEKSNPAPGLIHKYHGRVLLIAAPHCAINCRYCFRRHF--DY 133 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +AALAYI+ + +I EVI +GGDPL+L K+L+ +L + I H+ +R H Sbjct: 134 RQNTPSRTEWQAALAYIKTRPEIDEVILSGGDPLMLGDKQLRWLLTEIDAIPHITRIRIH 193 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P R L++ L + + H NH E + A L AGI LL+Q+ Sbjct: 194 SRLPVVLPDRFTSTLLELLSATRAQMVVVAHCNHSQEIDQSVEAVFEALKQAGITLLNQT 253 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLK IND IL L + + + PYYLH D +GT+H+ + + +++ L ++ Sbjct: 254 VLLKNINDSANILIELSKRLFQSGVLPYYLHLLDRVSGTAHYEVDELDARRLREELLAQL 313 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 G P + + PG K I Sbjct: 314 PGYLVPTLVKEEPGAPSKTPI 334 >gi|269103626|ref|ZP_06156323.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP 102761] gi|268163524|gb|EEZ42020.1| lysine 2,3-aminomutase [Photobacterium damselae subsp. damselae CIP 102761] Length = 340 Score = 389 bits (999), Expect = e-106, Method: Composition-based stats. Identities = 94/319 (29%), Positives = 157/319 (49%), Gaps = 3/319 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++ L N I ++ +++ + + NP DP+ RQ +P ++E Sbjct: 23 AISDPLKLLNLLKIDPTPWEKGLAARKLFALRVPMSFVERMEVGNPYDPLLRQVLPLEQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + + + G++H+Y +R+L+ + C + CR+CFRR + Sbjct: 83 FEVHAGYSTDPL-EEQDNDIPGLLHKYKNRVLMIVKGGCAINCRYCFRRHFPY--QDNKG 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + +L YI ++ EVI +GGDPL+ L ++ + I H++ LR HSR+P+ Sbjct: 140 SKSVWQQSLDYIANHPELDEVILSGGDPLMAKDHELAWLMDGIEQIPHIKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P R+ P+L Q + V + H NH E + E A+ L +A + LL+Q VLLKG Sbjct: 200 VLPSRVTPDLCQRFASSRLQVILVTHINHCNEINAELTLAMQNLKHANVTLLNQGVLLKG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + L NL + I PYYLH D G +HF + + + ++A L E +SG Sbjct: 260 VNDSVQALINLSNRLFDAGILPYYLHVLDKVQGAAHFFVDDIQAKTLMAGLMENVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D H Sbjct: 320 PQLTREIGGRSSKTPLDLH 338 >gi|90581266|ref|ZP_01237063.1| hypothetical protein VAS14_18921 [Vibrio angustum S14] gi|90437505|gb|EAS62699.1| hypothetical protein VAS14_18921 [Vibrio angustum S14] Length = 340 Score = 388 bits (998), Expect = e-106, Method: Composition-based stats. Identities = 96/318 (30%), Positives = 158/318 (49%), Gaps = 3/318 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++ L I + +++ + + + NP+DP+ RQ +P ++E Sbjct: 23 AISDPFQLLKLLKIDPTPWENGLAARKLFALRVPLSFVDKMEIGNPHDPLLRQILPLEQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + + + G++H+Y +R+LL + C V CR+CFRR S Sbjct: 83 FEVHQGYSVDPL-EEQQNDIPGLLHKYHNRVLLIVKGGCAVNCRYCFRRHFPYSDNKG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + +LAYI +I EVI +GGDPL+ LQ +++ + I H++ LR HSR+P+ Sbjct: 140 NKHQWQQSLAYIAAHPEINEVILSGGDPLMAKDHELQWLVEHIAAIPHIKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L E + H NH E + A+ +L A + LL+Q VLLKG Sbjct: 200 VIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMQKLKQANVTLLNQGVLLKG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND + L +L + I+PYYLH D G +H+ + E ++++A L ++SG Sbjct: 260 INDSVKTLTDLSEALFDAGIQPYYLHVLDRVQGAAHYMVDDETARQLMAGLITQVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PKLTREIGGRASKTPLDL 337 >gi|163802718|ref|ZP_02196608.1| chaperonin GroEL [Vibrio sp. AND4] gi|159173425|gb|EDP58247.1| chaperonin GroEL [Vibrio sp. AND4] Length = 340 Score = 388 bits (997), Expect = e-106, Method: Composition-based stats. Identities = 88/324 (27%), Positives = 162/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ + L I + +S+ + + NP+DP+ RQ + Sbjct: 19 QLSN-AISDPRKLLEVLEIDPTPWQKGFAARELFSLRVPLSFVERMEKGNPHDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE + DP+ + ++ + G++H+Y +R L+ + C + CR+CF R Sbjct: 78 PLSEEFEVHQGYSADPLDEQGNA-IPGLLHKYKNRALMIVKGGCAINCRYCFSRHFPY-- 134 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L Y+ + +I EVI +GGDPL+ ++ +++ + +I H++ LR H Sbjct: 135 QDNKGSKSVWQTSLDYVSQHPEINEVILSGGDPLMAKDSEIEWLIQAIEHIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI +L L+ + + + H NH E + E A +++L G+ LL+Q+ Sbjct: 195 SRLPVVIPARITDQLSHLLQASRLQIVLVTHINHADEINAELTAKMAKLKQVGVTLLNQA 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLK +ND E L + I PYYLH D G +H+ ++ + ++I+ + ++ Sbjct: 255 VLLKDVNDSVEAQVTLNEALFDAGILPYYLHVLDKVQGAAHYFVSDTQAKEIMRGVITRV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D + Sbjct: 315 SGYLVPKLTREIGGRPSKTPLDLN 338 >gi|148825389|ref|YP_001290142.1| DNA repair protein RecO [Haemophilus influenzae PittEE] gi|229846415|ref|ZP_04466523.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1] gi|148715549|gb|ABQ97759.1| DNA repair protein RecO [Haemophilus influenzae PittEE] gi|229810508|gb|EEP46226.1| DNA repair protein RecO [Haemophilus influenzae 7P49H1] gi|309972513|gb|ADO95714.1| Conserved hypothetical protein [Haemophilus influenzae R2846] Length = 338 Score = 387 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 102/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q + Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E DP+ + N + + I+H+Y +R+L C V CR+CFRR + Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+ Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 317 GYLVPKLAREIAGEPNKT 334 >gi|323498137|ref|ZP_08103141.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326] gi|323316848|gb|EGA69855.1| lysine 2,3-aminomutase [Vibrio sinaloensis DSM 21326] Length = 340 Score = 387 bits (996), Expect = e-105, Method: Composition-based stats. Identities = 100/324 (30%), Positives = 165/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAKLLEQLEIDPTPWQQGFEARQLFAQRVPQSFVDRMEKGNPFDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE ++ DP+ + + + G++H+Y +R L+ + C + CR+CFRR + Sbjct: 78 PLSEEFDVKQGYSNDPLLEQ-DNAIPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYQE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 S + +L Y+Q++ +I EVI +GGDPL+ L+ +++ + IKH++ +R H Sbjct: 137 NKG--SKAVWQQSLDYVQQQPEINEVILSGGDPLMAKDDELRWLVERIADIKHIKRIRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI EL++ V + H NH E + E A +RL AGI LL+Q Sbjct: 195 SRLPVVIPARITDELLEIFSTTRLQVVMVTHVNHAQEINHELRLATARLKLAGITLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 V+LKG+ND E L + I PYY+H D G +HF ++ E ++I+A L E++ Sbjct: 255 VMLKGVNDSIEAQVALSEALFDANILPYYIHVLDKVQGAAHFYISDHEAKRIMAGLLERV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPTLTREIGGRSSKTPLDLH 338 >gi|268323654|emb|CBH37242.1| hypothetical protein, radical SAM family [uncultured archaeon] Length = 515 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 121/317 (38%), Positives = 180/317 (56%), Gaps = 7/317 (2%) Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68 S ++ +L + D K ++ Y + + P +LI D I +Q +P EL Sbjct: 14 ESVANMRQLSLYYPVEKDAAK-VTRKYPMRINPYYLSLIKER--EDAIWKQSMPDIMELE 70 Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128 E DP+ ++ SP+ G+VHRYPDR+LL + + C +YCRFC R+ VG + Sbjct: 71 D-EEGVPDPLHEDKDSPVSGLVHRYPDRVLLLVSNRCAMYCRFCTRKRKVGDPFKRI-KK 128 Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188 + + YI+E I +V+ +GGDPL+L+ + L L+ L+ IKHV +LR +RVP Sbjct: 129 EQVLQGIEYIREHEAIRDVLISGGDPLLLNDEELAFFLERLKEIKHVDVLRIGTRVPCAL 188 Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 PQRI L+ L+ P+YI H NHP EF+EE+ A S +A+AGI L Q+VLLKG+N Sbjct: 189 PQRITDGLLSLLRRY-HPLYINTHFNHPGEFTEESRRACSMIADAGIPLGDQTVLLKGVN 247 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 D +++ L+R +R+ PYY++ DL GT HFR ++EG +I LK S L P Sbjct: 248 DSVDVMNALIRGLWSMRVTPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPH 306 Query: 309 YILDLPGGYGKVKIDTH 325 +++D PGG GK+ I Sbjct: 307 FVIDAPGGGGKIPITPE 323 Score = 121 bits (305), Expect = 1e-25, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 18/151 (11%) Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 + LK+ P+YI +H HP E +E+ +S ++AG+ L + L++G+NDDP+++ L Sbjct: 380 ELLKQY-HPIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPKVIKEL 438 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 + ++LR+KPYYLH D + EEG I+ SL+ SG+ P I+ Sbjct: 439 VHGLLKLRVKPYYLH-AD----------SEEEGLTIINSLRGFTSGMAVPHLIV-----G 482 Query: 318 GKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 K+ I + I + + + ++ + +YP Sbjct: 483 DKI-ICPNYIVEKTSEKIMLKNYQGMTFEYP 512 >gi|238757499|ref|ZP_04618684.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC 35236] gi|238704261|gb|EEP96793.1| Uncharacterized kamA family protein yjeK [Yersinia aldovae ATCC 35236] Length = 284 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 93/286 (32%), Positives = 153/286 (53%), Gaps = 3/286 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P NP+DP+ Q + +EE P DP+ + S + G++H+Y +R LL + C Sbjct: 1 MQPGNPSDPLLLQVLTAQEEFITAPGFTTDPLDEQR-SVVPGLLHKYRNRALLLVKSGCA 59 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V CR+CFRR + + AL YI++ ++ E+IF+GGDPL+ + L +L Sbjct: 60 VNCRYCFRRHFPYQDNQG--NKANWRQALDYIRQHPELDEIIFSGGDPLMANDSELSWLL 117 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + I H++ LR H+R+P+V P RI L Q L + V + H NH E + + Sbjct: 118 DEIESISHIKRLRIHTRLPVVIPARITANLCQRLSNSRLQVLMVTHINHANEIDQSLRNS 177 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 +++L AG+ LL+QSVLL+G+N+D ++LA L + I PYY+H D G +HF + Sbjct: 178 MAQLKRAGVTLLNQSVLLRGVNNDADVLAALSNALFDAGILPYYIHVLDKVQGAAHFMVD 237 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332 +E ++++ L ++SG P ++ G K +D I+ Sbjct: 238 DDEARQLMKGLLSRVSGYLVPRLTREIGGEPSKTPLDLRLIQSESQ 283 >gi|268323533|emb|CBH37121.1| putative L-lysine 2,3-aminomutase [uncultured archaeon] Length = 515 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 121/317 (38%), Positives = 181/317 (57%), Gaps = 7/317 (2%) Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELN 68 S ++ +L + D K ++ Y + + P +LI D I +Q +P EL Sbjct: 14 ESVANMRQLSLYYPVEKDAAK-VTRKYPMRINPYYLSLIKER--EDAIWKQSMPDIMELE 70 Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128 E DP+ + SP+ G+VHRYPDR+LL + + C +YCRFC R+ VG + Sbjct: 71 D-EEGVPDPLHEEKDSPVSGLVHRYPDRVLLLVSNRCAMYCRFCTRKRRVGDPFKRI-KK 128 Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188 + + YI+E+ +I +V+ +GGDPL+L+ L L+ L+ IKHV++LR +RVP Sbjct: 129 EQVLQGIEYIREREEIRDVLISGGDPLLLNDDELAFFLERLKKIKHVEVLRIGTRVPCAL 188 Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 PQRI L+ L+ P+YI H NHP EF+EE+ A S +A+AGI L Q+VLLKG+N Sbjct: 189 PQRITDALLSLLRRY-HPLYINTHFNHPGEFTEESRKACSMIADAGIPLGDQTVLLKGVN 247 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 D +++ L+R +R+ PYY++ DL GT HFR ++EG +I LK S L P Sbjct: 248 DSVDVMNALIRGLWSMRVTPYYIYQADLTKGTKHFRTDVDEGIEIFKRLKFHPS-LPMPH 306 Query: 309 YILDLPGGYGKVKIDTH 325 +++D PGG GK+ I Sbjct: 307 FVIDAPGGGGKIPITPE 323 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 18/151 (11%) Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 + LK+ P+YI +H HP E +E+ +S ++AG+ L + L++G+NDDP ++ L Sbjct: 380 ELLKQY-HPIYINMHLKHPDELTEDVKRVVSMFSDAGVPLGDRINLIEGVNDDPRVIKEL 438 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 + ++LR+KPYYLH D + EEG I+ SL+ SG+ P I+ Sbjct: 439 VHGLLKLRVKPYYLH-AD----------SEEEGLTIINSLRGFTSGMAVPHLIV-----G 482 Query: 318 GKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 K+ I ++I + + + ++ + +YP Sbjct: 483 DKI-ICPNHIVEKTSEKIMLKNYQGMTFEYP 512 >gi|319782550|ref|YP_004142026.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168438|gb|ADV11976.1| lysine 2,3-aminomutase YodO family protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 370 Score = 387 bits (995), Expect = e-105, Method: Composition-based stats. Identities = 133/349 (38%), Positives = 192/349 (55%), Gaps = 5/349 (1%) Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + +DL + + + + ++ + +LI+ ++P DPI Q Sbjct: 19 WQADVRAGVRHVRDLDRL-PLSSAERAAAQAAAANHKVRAPKAYLDLIDWNDPADPIRAQ 77 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 IP +EL E +DPI D++ SP+ + HR+ DR+LL + C VYCRFCFR+E + Sbjct: 78 VIPSPQELEEAEGELDDPIADHDFSPVPRLTHRHADRVLLFPTYQCAVYCRFCFRKESLT 137 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 S G + + E ALAYI + +I EVI TGGDPL L K L ++ + I HV++LR Sbjct: 138 S-IGRGYTREALEPALAYIADHPEIREVILTGGDPLSLPEKALAEIRARIEAIAHVRLLR 196 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+RVP+ P RI P L+ L + V I H NH E ++ A L AG +LL+ Sbjct: 197 IHTRVPVALPSRITPGLVAAL-QGRLMVTIVTHFNHAREITQATETACRTLRQAGFVLLN 255 Query: 240 QSVLLKGINDDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 QSVLLKG+ND E L L R L +KPYYLHH DLA G +H R TI +GQ + +L+ Sbjct: 256 QSVLLKGVNDSVEALEELCRELMYRLGVKPYYLHHGDLARGMAHRRTTIAQGQALAEALR 315 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 ++SG+C P Y+LDLP G GKV I +++ ++ + V Y Sbjct: 316 ARLSGICNPVYVLDLPEGGGKVPIGPCHVEGRDGENWRLRGLDGEVRAY 364 >gi|307544317|ref|YP_003896796.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581] gi|307216341|emb|CBV41611.1| hypothetical protein HELO_1727 [Halomonas elongata DSM 2581] Length = 572 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 100/323 (30%), Positives = 163/323 (50%), Gaps = 3/323 (0%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + ++L ++K + + + + I P +P+DP+ RQ Sbjct: 252 WQTQLSGAIRDPRELCRRLGLEKRWWPGAETGHALFEVRVPEAYLARIRPGDPHDPLLRQ 311 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P EE + P DP+ + H+P +G++H+Y R+LL C + CR+CFRR Sbjct: 312 VLPLDEESHSTPGFVTDPLEEREHTPRRGLIHKYAGRVLLIASPACAINCRYCFRRHFPY 371 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + S L Y++ + I E I +GGDPL + ++L +++ L I H++ LR Sbjct: 372 DEN--APSRAQWADTLDYLRGDASIREAILSGGDPLAANDRQLGWLVEQLEAIPHLKRLR 429 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P RI+ L+ L + +H NHP E E I A RL +AG+ LL+ Sbjct: 430 IHTRLPVVIPDRIDGALLDWLGRTRLQKVVVLHINHPNEIDEAVIDACRRLRDAGVTLLN 489 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL GINDD + L L E + PYYLH D G +HF + + + +V +++ Sbjct: 490 QSVLLAGINDDVDTLTALSERLFEADVLPYYLHVLDPVDGAAHFEIDDDTARTLVDAMRR 549 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++ G P + ++PG K I Sbjct: 550 ELPGFLMPTLVREIPGEASKTPI 572 >gi|145634674|ref|ZP_01790383.1| DNA repair protein RecO [Haemophilus influenzae PittAA] gi|145268219|gb|EDK08214.1| DNA repair protein RecO [Haemophilus influenzae PittAA] Length = 338 Score = 387 bits (994), Expect = e-105, Method: Composition-based stats. Identities = 103/318 (32%), Positives = 157/318 (49%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q + Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E DP+ + N + + I+H+Y +R+L C V CR+CFRR + Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+ Sbjct: 139 PG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANAMQKLNAVNVTLLNQSV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 317 GYLVPKLAREIAGEPNKT 334 >gi|319896657|ref|YP_004134850.1| lysine 2,3-aminomutase [Haemophilus influenzae F3031] gi|317432159|emb|CBY80510.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3031] Length = 338 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 100/318 (31%), Positives = 153/318 (48%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ L A + ++ ++ + + + + + NP DP+ Q + Sbjct: 20 LKN-AISDPTLLLKALNLPEDDFEQSIAARKLFPLRVPQPFIDKMEKGNPQDPLFLQVMC 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E DP+ + N + I+H+Y +R+L C V CR+CFRR + Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAAPNILHKYQNRLLFMTKGGCAVNCRYCFRRHFPYDEN 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+ Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNAMQKLNTVNVTLLNQSV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LL+G+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S Sbjct: 257 LLRGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 317 GYLVPKLAREIAGEPNKT 334 >gi|240949712|ref|ZP_04754047.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305] gi|240295970|gb|EER46646.1| hypothetical protein AM305_12200 [Actinobacillus minor NM305] Length = 333 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 95/321 (29%), Positives = 148/321 (46%), Gaps = 4/321 (1%) Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 QL + L + ++ ++ +++ + A + + NDP+ Q Sbjct: 13 WQLDLAQAFNDPVALLEYLELNPQEFEQAILARKLFAMRVPRPFAERMQKGDKNDPLFLQ 72 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR Sbjct: 73 AMTSSAEFTQVEGFTKDPLDEQ-HSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPY 131 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + +L YI E +I EVI +GGDPL+ + L +L L I HV+ LR Sbjct: 132 --EDVKSGKSAWQQSLQYIAEHPEIEEVILSGGDPLMAKDEELDWILTALEKITHVKTLR 189 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P RI +L ++ V + H NH E I++L A +ILL+ Sbjct: 190 IHTRLPVVIPNRITAQLCLRFADSRLNVVMVTHINHANEIDAVLANKIAKLKQADVILLN 249 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLKG+ND L L + I PYYLH D G SHF + E I L++ Sbjct: 250 QSVLLKGVNDSAITLKVLSDKLFSIGILPYYLHLLDKVEGASHFFVEDEIAFSIYKELQK 309 Query: 300 KISGLCQPFYILDLPGGYGKV 320 SG P ++ K Sbjct: 310 ISSGYLVPKLAREIAKEPNKT 330 >gi|16272281|ref|NP_438493.1| hypothetical protein HI0329 [Haemophilus influenzae Rd KW20] gi|68248934|ref|YP_248046.1| lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP] gi|260581205|ref|ZP_05849024.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW] gi|260582577|ref|ZP_05850367.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127] gi|319775807|ref|YP_004138295.1| lysine 2,3-aminomutase [Haemophilus influenzae F3047] gi|1176350|sp|P44641|Y329_HAEIN RecName: Full=Uncharacterized KamA family protein HI_0329 gi|1573296|gb|AAC21990.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20] gi|68057133|gb|AAX87386.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 86-028NP] gi|260092130|gb|EEW76074.1| lysine 2,3-aminomutase [Haemophilus influenzae RdAW] gi|260094388|gb|EEW78286.1| lysine 2,3-aminomutase [Haemophilus influenzae NT127] gi|317450398|emb|CBY86614.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae F3047] Length = 338 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q + Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E DP+ + N + + I+H+Y +R+L C V CR+CFRR + Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+ Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 317 GYLVPKLAREIAGEPNKT 334 >gi|301169034|emb|CBW28631.1| predicted lysine aminomutase [Haemophilus influenzae 10810] Length = 338 Score = 386 bits (993), Expect = e-105, Method: Composition-based stats. Identities = 102/318 (32%), Positives = 155/318 (48%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q + Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E DP+ + N + + I+H+Y +R+L C V CR+CFRR + Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+ Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 317 GYLVPKLAREIAGEPNKT 334 >gi|145638760|ref|ZP_01794369.1| DNA repair protein RecO [Haemophilus influenzae PittII] gi|145272355|gb|EDK12263.1| DNA repair protein RecO [Haemophilus influenzae PittII] gi|309750250|gb|ADO80234.1| Conserved hypothetical protein [Haemophilus influenzae R2866] Length = 338 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 103/318 (32%), Positives = 155/318 (48%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L A + K+ ++ +S+ + + I NP DP+ Q + Sbjct: 20 LKN-AISDPKLLLKALNLPKDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E DP+ + N + + I+H+Y +R+L C V CR+CFRR + Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+ Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 317 GYLVPKLAREIAGEPNKT 334 >gi|145632578|ref|ZP_01788312.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655] gi|144986773|gb|EDJ93325.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 3655] Length = 338 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 103/318 (32%), Positives = 156/318 (49%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q + Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E DP+ + N + + I+H+Y +R+L C V CR+CFRR + Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+ Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV Sbjct: 197 RLPVVIPQRITDEFCTLLAETPLQKVMVTHINHPNEIDQVFTNAMQKLNAVNVTLLNQSV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 317 GYLVPKLAREIAGEPNKT 334 >gi|292489640|ref|YP_003532530.1| kamA family protein [Erwinia amylovora CFBP1430] gi|292898145|ref|YP_003537514.1| hypothetical protein EAM_0421 [Erwinia amylovora ATCC 49946] gi|291197993|emb|CBJ45095.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946] gi|291555077|emb|CBA23181.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora CFBP1430] gi|312173816|emb|CBX82070.1| Uncharacterized kamA family protein TP_0121 [Erwinia amylovora ATCC BAA-2158] Length = 342 Score = 386 bits (992), Expect = e-105, Method: Composition-based stats. Identities = 94/296 (31%), Positives = 151/296 (51%), Gaps = 3/296 (1%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 + +++ + A + +P DP+ Q I ++E P DP+ + + S + G+ Sbjct: 46 DARRLFALRVPKAFAARMRKGDPQDPLLLQVITSRQEFVDAPGYSADPLDEQS-SVVPGL 104 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +H+Y +R LL + C V CR+CFRR + + ++ + AL YI+++ ++ E+I Sbjct: 105 LHKYRNRALLLVKGGCAVNCRYCFRRHFPYQENQG--NKRNWQQALEYIRQQPELDEIIL 162 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL+ L ++ L I H++ LR HSR+P+V P+RI L Q L + + Sbjct: 163 SGGDPLMAKDHELDWLIGQLEQIPHLRRLRIHSRLPVVIPKRITEALCQRLAQTRLQTLM 222 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 H NH E E+ + L AG+ LL+QSVLL+ IND +LA L + I PY Sbjct: 223 VTHINHAQEIDEDLRHGMRMLKRAGVTLLNQSVLLRDINDSAPVLAALSNALFDAGILPY 282 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 YLH D G +HF ++ E + IV L +SG P ++ G K +D Sbjct: 283 YLHVLDKVQGAAHFYVSDERARIIVRELLTMVSGYMVPKLAREIGGEPSKTPLDLQ 338 >gi|261254094|ref|ZP_05946667.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891] gi|260937485|gb|EEX93474.1| lysine 2,3-aminomutase [Vibrio orientalis CIP 102891] Length = 340 Score = 385 bits (991), Expect = e-105, Method: Composition-based stats. Identities = 97/324 (29%), Positives = 163/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ L I + ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPAKLLEELEIDPTPWQSGFDARKLFAQRVPQSFVDRMEKGNPFDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE I DP+ + N+S + G++H+Y +R L+ + C + CR+CFRR + Sbjct: 78 PLSEEFEIHEGYSNDPLEEQNNS-IPGLLHKYHNRALMIVKGGCAINCRYCFRRHFPYDE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + S + +L YIQ+ +I EVI +GGDPL+ + L ++ + I H++ LR H Sbjct: 137 NKS--SKSVWQQSLDYIQQHPEIDEVILSGGDPLMAKDEELNWLVNHIADIPHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI P L L+ + H NH E +E +++ L AG+ LL+Q Sbjct: 195 SRLPVVIPARITPALANLLENTRLQTILVTHINHAQEIHQELRDSLTTLKRAGVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 V+LKG+ND + L + + + PYY+H D G +HF ++ ++ + I+A + EK+ Sbjct: 255 VMLKGVNDSIDDQVTLSQALFDAGVLPYYMHVLDKVQGAAHFFISDQQAKIIMAGVMEKV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRASKTPLDLH 338 >gi|303250421|ref|ZP_07336619.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307252226|ref|ZP_07534123.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|307261137|ref|ZP_07542814.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|302650747|gb|EFL80905.1| hypothetical protein APP6_1836 [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306860148|gb|EFM92164.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 6 str. Femo] gi|306869167|gb|EFN00967.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 333 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 91/315 (28%), Positives = 147/315 (46%), Gaps = 3/315 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + L + + + +++ + A + + NDP+ Q + Sbjct: 19 QAFNDPAALLEYLELNPQAFETAITARKLFALRVPRAFAAKMQKGDKNDPLFLQAMSAAA 78 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR Sbjct: 79 EFLQAEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYD--DVK 135 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P Sbjct: 136 SGKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQANVVLLNQSVLLK 255 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ +IL L E + PYYLH D G SHF + + +I L+ SG Sbjct: 256 GVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYL 315 Query: 306 QPFYILDLPGGYGKV 320 P ++ K Sbjct: 316 VPKLAREIAREPNKT 330 >gi|223041468|ref|ZP_03611671.1| hypothetical protein AM202_0087 [Actinobacillus minor 202] gi|223017726|gb|EEF16133.1| hypothetical protein AM202_0087 [Actinobacillus minor 202] Length = 333 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 93/321 (28%), Positives = 147/321 (45%), Gaps = 4/321 (1%) Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 QL + L + + ++ +++ + A + + NDP+ Q Sbjct: 13 WQLDLAQAFNDPVALLEYLELNPREFEQAILARKLFAMRVPRPFAEKMQKGDKNDPLFLQ 72 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR Sbjct: 73 AMTSSSEFTQVEGFIKDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPY 131 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + +L YI E +I EVI +GGDPL+ + L +L L I HV+ LR Sbjct: 132 --EDVKSGKTVWQQSLQYIAEHPEIEEVILSGGDPLMAKDEELDWILTALEKINHVKTLR 189 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P RI +L ++ V + H NH E ++ L +G++LL+ Sbjct: 190 IHTRLPVVIPNRITSQLCLRFADSRLNVVMVTHINHANEIDTVLANKMAELKQSGVVLLN 249 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLKG+ND L L + I PYYLH D G SHF + E I L++ Sbjct: 250 QSVLLKGVNDSAITLKALSDKLFSIGILPYYLHLLDKVEGASHFFVEDEVAFSIYKELQK 309 Query: 300 KISGLCQPFYILDLPGGYGKV 320 SG P ++ K Sbjct: 310 ISSGYLVPKLAREIAKEPNKT 330 >gi|325577289|ref|ZP_08147773.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392] gi|325160871|gb|EGC72992.1| KamA family protein [Haemophilus parainfluenzae ATCC 33392] Length = 340 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 98/318 (30%), Positives = 150/318 (47%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L + E E +++ + + NP DP+ Q + Sbjct: 22 LKN-AISDPKILLKTLNLPVEDFAEDIAARKLFAMRVPLPFVEKMEKGNPKDPLFLQVMT 80 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 ++E +DP+ + + + I+H+Y +R+L C V CR+CFRR Q Sbjct: 81 VQQEFIEAEGFSQDPLDEQQKNAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDQN 140 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + + A+ YI +I EVIF+GGDP++ +L+ L IKH+Q LR HS Sbjct: 141 PG--NKVSWKQAIDYIAAHPEIEEVIFSGGDPMMAKDSEWAWLLERLEKIKHLQRLRIHS 198 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V P+RI E L + H NHP E E A+ +L A +ILL+QSV Sbjct: 199 RLPVVIPERITDEFCDLLLNSPLQAVFVTHINHPNEIDEGLAFAMQKLTEAKVILLNQSV 258 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLK +ND+P L L + I PYYLH D G SHF ++ E +I L+ S Sbjct: 259 LLKDVNDNPHTLKVLSDKLFQAGILPYYLHLLDKVQGASHFYISDERALQIYRELQALTS 318 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 319 GYLVPKLAREIGGEPNKT 336 >gi|89075329|ref|ZP_01161751.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34] gi|89048878|gb|EAR54447.1| hypothetical protein SKA34_16270 [Photobacterium sp. SKA34] Length = 340 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 95/318 (29%), Positives = 157/318 (49%), Gaps = 3/318 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++ L I + +++ + + + NP+DP+ RQ +P ++E Sbjct: 23 AISDPFQLLKLLKIDPTPWENGLAARKLFALRVPLSFIDKMEIGNPHDPLLRQILPLEQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + + + G++H+Y +R+LL + C V CR+CFRR S Sbjct: 83 FEVHQGYSIDPLKEQQND-IPGLLHKYHNRVLLIVKGGCAVNCRYCFRRHFPYSDNKG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + +L YI +I EVI +GGDPL+ LQ +++ + I H++ LR HSR+P+ Sbjct: 140 NKHQWQQSLEYIAAHPEINEVILSGGDPLMAKDHELQWLVEHIAAIPHIKRLRIHSRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L E + H NH E + A+ +L A + LL+Q VLLKG Sbjct: 200 VIPNRITDNLCQILAETRLQTILVTHINHANEIDDALTTAMGKLKQANVTLLNQGVLLKG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + L +L + I+PYYLH D G +HF + E ++++A L ++SG Sbjct: 260 VNDSVKALTDLSEALFDAGIQPYYLHVLDRVQGAAHFMIDDETARQLIAGLITQVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K +D Sbjct: 320 PKLTREIGGRASKTPLDL 337 >gi|254427978|ref|ZP_05041685.1| KamA family protein [Alcanivorax sp. DG881] gi|196194147|gb|EDX89106.1| KamA family protein [Alcanivorax sp. DG881] Length = 335 Score = 385 bits (990), Expect = e-105, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 168/323 (52%), Gaps = 4/323 (1%) Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + +T +L++ + + + + + + + +L+ NP+DP+ RQ Sbjct: 14 WQRQQADLITDPAELFSQLALTPQDLPASLAAAGDFPLRVPRRYVDLMERGNPDDPLLRQ 73 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + EE + DP+ + +H+ + G++H+Y R LL + C V+CR+CFRR Sbjct: 74 VLSAPEERQVHQGYSADPLDEADHTAVPGLLHKYHGRALLVVTGACAVHCRYCFRRHFPY 133 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 T LS K E AL ++ + I EVI +GGDPL L+++RL+++L L I H++ LR Sbjct: 134 Q---THLSGKRWEQALEWLAARPDIHEVILSGGDPLTLTNRRLEQLLDALAAIPHLRRLR 190 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR P+V P+R++ L L + +HANHP E S +A +AG+ LL+ Sbjct: 191 IHSRTPVVIPERLDAGLKALLTRDRWQTVLVLHANHPREISPALVARCRDWRSAGMTLLN 250 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL G+ND + LA+L + + PYYLH D G +HF + +++ A L+ Sbjct: 251 QSVLLAGVNDRVDTLADLSDALFDAGVLPYYLHQLDAVQGAAHFAVPDVIARELHADLRA 310 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++ G P + PG K + Sbjct: 311 RLPGFLVPRLTREEPGEPAKTVL 333 >gi|90413354|ref|ZP_01221347.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK] gi|90325596|gb|EAS42065.1| hypothetical protein P3TCK_13176 [Photobacterium profundum 3TCK] Length = 340 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 91/319 (28%), Positives = 153/319 (47%), Gaps = 3/319 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++ L I ++ +++ + + + NP DP+ RQ +P + E Sbjct: 23 AISDPFLLLKTLKIDPTPWEKGLAARKLFALRVPMSFVDRMEIGNPYDPLLRQILPLEPE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + + + G++H+Y +R L+ + C V CR+CFRR Sbjct: 83 FEVHDGYSLDPL-EEQDNAIPGLLHKYKNRALMIVKGGCAVNCRYCFRRHFPY--NDNKG 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + AL YI E ++ EVI +GGDPL+ L ++ + I H++ LR H+R+P+ Sbjct: 140 GKAQWKVALTYIAEHPELNEVILSGGDPLMAKDHELAWLVDEIESISHIKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL + + + H NH E ++E A+++L LL+Q VLL+G Sbjct: 200 VIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTKLKRVNATLLNQGVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND + L +L I+PYYLH D G +HF + E ++++A L + +SG Sbjct: 260 INDSVDALTSLSEALFTAGIQPYYLHVLDKVQGATHFMVDDTEARQLMAGLMQNVSGYMV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D H Sbjct: 320 PKLTREIGGRASKTPLDLH 338 >gi|145640274|ref|ZP_01795858.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021] gi|145274860|gb|EDK14722.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.4-21] Length = 338 Score = 385 bits (989), Expect = e-105, Method: Composition-based stats. Identities = 103/318 (32%), Positives = 157/318 (49%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q + Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E DP+ + N + + I+H+Y +R+L C V CR+CFRR + Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+ Sbjct: 139 PG--NKKSWQLALDYIAAHSEIEEVIFSGGDPLMAKDHELAFLIKHLENIPHLQRLRIHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANAMQKLNAVNVTLLNQSV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLKG+NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S Sbjct: 257 LLKGVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 317 GYLVPKLAREIAGEPNKT 334 >gi|260774695|ref|ZP_05883599.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450] gi|260609351|gb|EEX35502.1| lysine 2,3-aminomutase [Vibrio coralliilyticus ATCC BAA-450] Length = 340 Score = 384 bits (987), Expect = e-104, Method: Composition-based stats. Identities = 91/324 (28%), Positives = 165/324 (50%), Gaps = 4/324 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + ++ + L I E ++ + + + NP DP+ RQ + Sbjct: 19 QLAN-GISDPEKLLLQLEIDPSPWQSGFEARKLFAQRVPQSFVDRMEKGNPFDPLLRQVL 77 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE ++ DP+ + ++ + G++H+Y +R L+ + C + CR+CFRR ++ Sbjct: 78 PLSEEFDVHSGYSTDPLDEQDNQ-VPGLLHKYRNRALMIVKGGCAINCRYCFRRHFPYNE 136 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + +L Y+++ ++ E+I +GGDPL+ + LQ ++ + I+H++ LR H Sbjct: 137 NKG--NKSVWSQSLDYVRQHPELNEIILSGGDPLMAKDEELQWLIGQIADIQHIKRLRIH 194 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P RI + L V + H NH E ++E A+S L G+ LL+Q Sbjct: 195 SRLPVVIPARITTTFTKLLAGTRLQVILVTHINHANEINQELRDALSSLRREGVTLLNQG 254 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 V+LKG+ND E L + + + PYY+H D G +HF ++ ++ ++I+A + E++ Sbjct: 255 VMLKGVNDSVEAQVALSESLFDAGVLPYYIHVLDKVQGAAHFFISDQQAKQIMAGVIERV 314 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH 325 SG P ++ G K +D H Sbjct: 315 SGYLVPKLTREIGGRASKTPLDLH 338 >gi|54310450|ref|YP_131470.1| hypothetical protein PBPRA3383 [Photobacterium profundum SS9] gi|46914891|emb|CAG21668.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 357 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 93/319 (29%), Positives = 154/319 (48%), Gaps = 3/319 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++ L I ++ +++ + + + NP DP+ RQ +P + E Sbjct: 40 AISDPFLLLKTLKIDPIPWEKGLAARKLFALRVPMSFVDRMEIGNPYDPLLRQVLPLEPE 99 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + + + G++H+Y +R L+ + C V CR+CFRR S Sbjct: 100 FEVHDGYSLDPLKEQ-DNAIPGLLHKYKNRALMIVKGGCAVNCRYCFRRHFPYSDNKG-- 156 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + AL YI E ++ EVI +GGDPL+ L ++ + I H++ LR H+R+P+ Sbjct: 157 GKTQWKKALNYIAEHPELNEVILSGGDPLMAKDHELAWLVDEIESIPHIKRLRIHTRLPV 216 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI EL + + + H NH E ++E A+++L + LL+Q VLL+G Sbjct: 217 VIPNRITDELCTLIGNSRLQTILVTHINHANEINDELTDAMTKLKRVNVTLLNQGVLLRG 276 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND E L L + I+PYYLH D G +HF + E + ++A L + +SG Sbjct: 277 INDSVEALTALSESLFTAGIQPYYLHVLDKVQGAAHFMIDDTEARHLMAGLMQNVSGYMV 336 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K +D H Sbjct: 337 PKLTREIGGRTSKTPLDLH 355 >gi|220934405|ref|YP_002513304.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7] gi|219995715|gb|ACL72317.1| Lysine 2,3-aminomutase [Thioalkalivibrio sp. HL-EbGR7] Length = 348 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 108/324 (33%), Positives = 168/324 (51%), Gaps = 3/324 (0%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q L+ +T + L + + + + + + + + P +PNDP+ RQ Sbjct: 26 WQRLQAAAITDPEVLIRRLGLDPALLPAARRAAELFRLRVPDGYLARMRPGDPNDPLLRQ 85 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E +P EDP+GD G++H+Y R+LL C V+CR+CFRR Sbjct: 86 VLPLDAEYRDVPGFVEDPVGDGAAMVAPGLLHKYRGRVLLVTTGACAVHCRYCFRRHFPY 145 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + + +AAL YI I EVI +GGDPL LS +RL + L I HV+ LR Sbjct: 146 GE--ANPARGEWQAALDYIAGDDSIHEVILSGGDPLSLSDERLSGLAGALGEIPHVRRLR 203 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR P++ P+R++ +L+ L+ + IHANH E A++RLA AG+ LL+ Sbjct: 204 VHSRQPVILPERVDEDLLAWLRPGRFQTVLVIHANHAREIHWPVREALARLARAGVSLLN 263 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+G+NDD + LA+L T + PYYLH D G SHF++ + ++ L+ Sbjct: 264 QSVLLRGVNDDVDTLADLSETLSATGVMPYYLHQLDPVRGASHFQVDDDRALRLHHGLRA 323 Query: 300 KISGLCQPFYILDLPGGYGKVKID 323 ++ G P + ++PG K + Sbjct: 324 RLPGYLVPRLVREIPGQDAKSPLS 347 >gi|229844579|ref|ZP_04464719.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1] gi|229812828|gb|EEP48517.1| DNA repair protein RecO [Haemophilus influenzae 6P18H1] Length = 338 Score = 383 bits (985), Expect = e-104, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 154/318 (48%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q + Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E DP+ + N + + I+H+Y +R+L C V CR+CFRR + Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + K + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+ Sbjct: 139 PG--NKKSWQLALDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LLK +NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S Sbjct: 257 LLKDVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 317 GYLVPKLAREIAGEPNKT 334 >gi|145628680|ref|ZP_01784480.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21] gi|144979150|gb|EDJ88836.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae 22.1-21] Length = 309 Score = 382 bits (983), Expect = e-104, Method: Composition-based stats. Identities = 101/306 (33%), Positives = 148/306 (48%), Gaps = 2/306 (0%) Query: 15 YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEER 74 A + K+ ++ +S+ + + I NP DP+ Q + E Sbjct: 2 LKALNLPKDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMCSDLEFVQAEGFS 61 Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134 DP+ + N + + I+H+Y +R+L C V CR+CFRR + + K + A Sbjct: 62 TDPLEEKNANAVPNILHKYRNRLLFMAKGGCAVNCRYCFRRHFPYDENPG--NKKSWQLA 119 Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 L YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+R+P+V PQRI Sbjct: 120 LDYIAVHPEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHTRLPVVIPQRITD 179 Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 E L E + H NHP E + A+ +L + LL+QSVLLKG+NDD +IL Sbjct: 180 EFCTLLAETRLQTVMVTHINHPNEIDQIFAHAMQKLNAVNVTLLNQSVLLKGVNDDAQIL 239 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 L + I PYYLH D G SHF ++ E +I +L+ SG P ++ Sbjct: 240 KILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTSGYLVPKLAREIA 299 Query: 315 GGYGKV 320 G K Sbjct: 300 GEPNKT 305 >gi|218780437|ref|YP_002431755.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum alkenivorans AK-01] gi|218761821|gb|ACL04287.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum alkenivorans AK-01] Length = 353 Score = 382 bits (981), Expect = e-104, Method: Composition-based stats. Identities = 123/340 (36%), Positives = 187/340 (55%), Gaps = 10/340 (2%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + S L I + + + Y + +T +LI N DPIARQ IP EEL Sbjct: 21 IISPDGLSRILPID---FQAMGKAAETYPMRITKYFLSLIREQN--DPIARQVIPSAEEL 75 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + DP+ + + SP+ G++HRYP +L ++ + C VYCR C R+ VG K ++ Sbjct: 76 SD-ASLSPDPLCEEDQSPVPGLIHRYPHHVLFQVENRCAVYCRHCLRKRKVGGVKP--VT 132 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 ++ + YI+ +I EV+ +GGDPL++ +L +L+ LR I HV+ LR HSR+P V Sbjct: 133 AEALAQGVDYIRSNQEIREVVLSGGDPLVMEDDKLLDLLRRLRAINHVRTLRVHSRIPGV 192 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI PEL + L + P+Y+ I NHP E + E+ A LA+ G+ L Q+VLLKG+ Sbjct: 193 LPQRITPELAKGLADF-HPLYMNIQFNHPREITPESEEACRILADQGVPLGCQTVLLKGV 251 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 NDD +L LM + +R++PYYLH D G +HF + I G K++ +L+ I G P Sbjct: 252 NDDEAVLRELMEELLRIRVRPYYLHQLDRVKGAAHFHVPISRGVKLMQALRGSIPGTAIP 311 Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 Y++DLPGG GK + +I + + + + Y Sbjct: 312 HYVVDLPGGGGKAPL-PESIVGREENAILVRNFEGKIFRY 350 >gi|53729180|ref|ZP_00134024.2| COG1509: Lysine 2,3-aminomutase [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|126208156|ref|YP_001053381.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae L20] gi|190149985|ref|YP_001968510.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|303252405|ref|ZP_07338571.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|307247647|ref|ZP_07529688.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|307263313|ref|ZP_07544931.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|126096948|gb|ABN73776.1| hypothetical protein APL_0676 [Actinobacillus pleuropneumoniae serovar 5b str. L20] gi|189915116|gb|ACE61368.1| hypothetical protein APP7_0716 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|302648864|gb|EFL79054.1| hypothetical protein APP2_1381 [Actinobacillus pleuropneumoniae serovar 2 str. 4226] gi|306855815|gb|EFM87977.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 2 str. S1536] gi|306871375|gb|EFN03101.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 333 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 3/315 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + L + + + +++ + A + + NDP+ Q + Sbjct: 19 QAFNDPTALLEYLELNPQAFETAITARKLFALRVPRAFAAKMQKGDKNDPLFLQAMSAAA 78 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR Sbjct: 79 EFLQAEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYD--DVK 135 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P Sbjct: 136 SGKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLK 255 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ + L L + + PYYLH D G SHF + ++ +I L+ SG Sbjct: 256 GVNDNAQTLKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYL 315 Query: 306 QPFYILDLPGGYGKV 320 P ++ K Sbjct: 316 VPKLAREIAREPNKT 330 >gi|307256695|ref|ZP_07538474.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] gi|306864743|gb|EFM96647.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 10 str. D13039] Length = 333 Score = 381 bits (980), Expect = e-104, Method: Composition-based stats. Identities = 89/315 (28%), Positives = 150/315 (47%), Gaps = 3/315 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + L + ++ + +++ + + + NDP+ Q + E Sbjct: 19 QAFNDPTALLEYLELNPKEFETAITARKLFALRVPRPFVEKMRKGDKNDPLFLQAMSAAE 78 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + + Sbjct: 79 EFLQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDEVKS- 136 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDNELDWLISALEQIPHIKTLRIHTRLP 195 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQANVVLLNQSVLLK 255 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ + L L + + PYYLH D G SHF + + +I L+ SG Sbjct: 256 GVNDNAQTLKALSDKLFDSGVLPYYLHLLDRVEGASHFFIEDRQAAEIYKELQRISSGYL 315 Query: 306 QPFYILDLPGGYGKV 320 P ++ K Sbjct: 316 VPKLAREIAKEPNKT 330 >gi|261492016|ref|ZP_05988591.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str. BOVINE] gi|261494571|ref|ZP_05991053.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261309762|gb|EEY10983.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str. OVINE] gi|261312299|gb|EEY13427.1| lysine 2,3-aminomutase [Mannheimia haemolytica serotype A2 str. BOVINE] Length = 330 Score = 381 bits (979), Expect = e-104, Method: Composition-based stats. Identities = 100/326 (30%), Positives = 157/326 (48%), Gaps = 10/326 (3%) Query: 2 QLRHKTLTSAQ-------DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND 54 Q++ + LT DL + + +++ + + A + NPND Sbjct: 5 QIKPRWLTELAQAFNNPIDLLQFLELNPNDFEGDIAARKLFALRVPRMFAEKMEKGNPND 64 Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 P+ Q + + E DP+ + SP I+H+Y +R+L L + C + CR+CFR Sbjct: 65 PLFLQAMSLQAEFIEAEGFVVDPL-EEQQSPAPNILHKYHNRLLFMLKNSCAINCRYCFR 123 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 R + + + L YI E ++ EVI +GGDPL+ + L +L L I H Sbjct: 124 RHFPYEEVKS--GKAVWQQGLTYIAEHPELEEVILSGGDPLMAKDQDLDWILTQLEQISH 181 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 ++ LR HSR+P+V P RI EL + L ++ V + H NH E +++L AG Sbjct: 182 IKTLRIHSRLPVVIPNRITTELCERLSKSRLNVVLVTHINHANEIDAVFANKMAQLKKAG 241 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 ++LL+QSV+LKG+ND+ + L L E I PYYLH D AG SHF + E+ +I Sbjct: 242 VVLLNQSVMLKGVNDNAQTLKRLSDKLFEYGILPYYLHLFDKVAGASHFYIEDEQAGEIY 301 Query: 295 ASLKEKISGLCQPFYILDLPGGYGKV 320 L+ SG P ++ K+ Sbjct: 302 RELQRITSGYLVPKLAREIAKEPNKI 327 >gi|126666938|ref|ZP_01737914.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17] gi|126628654|gb|EAZ99275.1| hypothetical protein MELB17_06854 [Marinobacter sp. ELB17] Length = 350 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 102/327 (31%), Positives = 162/327 (49%), Gaps = 4/327 (1%) Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q L + + L L ++ + +SI + + NPNDP+ R Sbjct: 26 WQQILANSIDRPVELLERLGLCPEQWMAGADAGHLLFSIRVPEPFLARMEYGNPNDPLLR 85 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q +P +E L DP+ + + G++ +Y R LL + C + CR+CFRR Sbjct: 86 QVLPLVDETRTLAGFVADPLAEADAMATTGLIRKYKSRALLMVTGQCAINCRYCFRRHFP 145 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 ++ L +D + L + +I EVIF+GGDPL + K L + K L I H++ L Sbjct: 146 YDEQ--RLKPQDRQTVLDTLANSPEINEVIFSGGDPLAANDKLLAQWAKALEQIPHLRRL 203 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R H+R+P+V PQR+ L+Q ++ V + +H NHP E + + A+ RL AG+ LL Sbjct: 204 RIHTRLPVVIPQRVCDALLQWIRATRLRVVVVLHINHPAEIDQATVQALQRLTEAGVTLL 263 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +QSV+L+G+ND ++L L + + PYYLH D AG HF + E + + L Sbjct: 264 NQSVILRGVNDSVDVLEQLSEQLFDAGVLPYYLHAFDPVAGAHHFAVPDSEAKALTRELL 323 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTH 325 E++ G P + +LPG K +D Sbjct: 324 ERLPGFLVPRLVRELPGAGSKTPLDLE 350 >gi|13471862|ref|NP_103429.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099] gi|14022606|dbj|BAB49215.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099] Length = 367 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 132/349 (37%), Positives = 191/349 (54%), Gaps = 5/349 (1%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + +DL + + + + H+ + +LI+ ++P DPI Q Sbjct: 16 WQDDVRQGVRHVRDLDRL-PLSPVERAAAQAAAAHHKVRAPKAYLDLIDWNDPADPIRAQ 74 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 IP +EL E DPI D++ SP+ + HR+ DR+LL + C VYCRFCFR+E + Sbjct: 75 VIPSPDELEEAEGELGDPIADHDFSPVPRLTHRHTDRVLLFPTYQCAVYCRFCFRKESLT 134 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 S G + + E ALAYI + +I EVI TGGDPL L K L +++ + I HV++LR Sbjct: 135 S-IGRGYTREALEPALAYIADHPEIREVILTGGDPLSLPDKALAEIVARIEAIPHVRLLR 193 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+RVP+ P RI L+ L + V + H NH E + A + AG +LL+ Sbjct: 194 IHTRVPVALPSRITSGLVAAL-QGRLMVTVVTHFNHAREITPATEVACRTMRQAGFVLLN 252 Query: 240 QSVLLKGINDDPEILANLMRTF-VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 QSVLLKG+ND E+L L R L +KPYYLHH DLA G +H R TI +GQ +V +L+ Sbjct: 253 QSVLLKGVNDTVEVLEELCRELMYRLGVKPYYLHHGDLARGMAHRRTTIAQGQALVEALR 312 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 ++SG+C P Y+LDLP G GKV + I+ ++ I + Y Sbjct: 313 ARLSGICNPVYVLDLPEGGGKVPLGPCPIEGREGDTWRIRGQDGAMRTY 361 >gi|165976091|ref|YP_001651684.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] gi|165876192|gb|ABY69240.1| hypothetical protein APJL_0671 [Actinobacillus pleuropneumoniae serovar 3 str. JL03] Length = 333 Score = 381 bits (979), Expect = e-103, Method: Composition-based stats. Identities = 89/315 (28%), Positives = 147/315 (46%), Gaps = 3/315 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + L + + + +++ + A + + NDP+ Q + Sbjct: 19 QAFNDPTALLEYLELNPQAFETAITARKLFALRVPRAFAAKMQKGDKNDPLFLQAMSAAA 78 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR Sbjct: 79 EFLQAEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYD--DVK 135 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P Sbjct: 136 SGKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQAKVVLLNQSVLLK 255 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ + L L + + PYYLH D G SHF + ++ +I L+ SG Sbjct: 256 GVNDNVQTLKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYL 315 Query: 306 QPFYILDLPGGYGKV 320 P ++ K Sbjct: 316 VPKLAREIAREPNKT 330 >gi|307249881|ref|ZP_07531855.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] gi|306858070|gb|EFM90152.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 4 str. M62] Length = 333 Score = 380 bits (978), Expect = e-103, Method: Composition-based stats. Identities = 91/315 (28%), Positives = 149/315 (47%), Gaps = 3/315 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + L + ++ + +++ + + + NDP+ Q + E Sbjct: 19 QAFNDPITLLEHLELNPKEFETAITARKLFALRVPRPFVEKMQKGDKNDPLFLQAMSAAE 78 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR Sbjct: 79 EFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYD--DVK 135 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P Sbjct: 136 SGKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P RI +L L ++ V + H NHP E E +++L A ++LL+QSVLLK Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQANVVLLNQSVLLK 255 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ +IL L E + PYYLH D G SHF + + +I L+ SG Sbjct: 256 GVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYL 315 Query: 306 QPFYILDLPGGYGKV 320 P ++ K Sbjct: 316 VPKLAREIAREPNKT 330 >gi|329123649|ref|ZP_08252209.1| KamA family protein [Haemophilus aegyptius ATCC 11116] gi|327469848|gb|EGF15313.1| KamA family protein [Haemophilus aegyptius ATCC 11116] Length = 338 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 101/318 (31%), Positives = 155/318 (48%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q + Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E DP+ + N + + I+H+Y +R+L C V CR+CFRR + Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYRNRLLFMTKGGCAVNCRYCFRRHFPYDEN 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+ Sbjct: 139 PG--NKKSWQLALDYIAVHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V PQRI E L E + H NHP E + A+ +L + LL+QSV Sbjct: 197 RLPVVIPQRITDEFCTLLAETRLQKVMVTHINHPNEIDQIFTNAMQKLNAVNVTLLNQSV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LL+ +NDD +IL L + I PYYLH D G SHF ++ E +I +L+ S Sbjct: 257 LLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHFLISDIEAMQIYKTLQSLTS 316 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++ G K Sbjct: 317 GYLVPKLAREIAGEPNKT 334 >gi|251791935|ref|YP_003006655.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700] gi|247533322|gb|ACS96568.1| DNA repair protein RecO [Aggregatibacter aphrophilus NJ8700] Length = 339 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 99/314 (31%), Positives = 152/314 (48%), Gaps = 3/314 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 ++ + L + E + E +++ + + NP DP+ Q + +E Sbjct: 24 ISDPKILLQHLELPFEPFKQDIEARKLFAMRVPMPFVEKMEKGNPKDPLFLQVMSSADEF 83 Query: 68 NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 +DP+ + N + + I+H+Y +R+L + C V CR+CFRR + Sbjct: 84 LQAEGFSKDPLEEQNDKNVVSNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYEENKG-- 141 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YI + +I EVIF+GGDPL+ L ++K L I H++ LR HSR+P+ Sbjct: 142 TKQNWQTALQYIAQHPEIEEVIFSGGDPLMAKDHELGWLIKHLENIPHLKRLRIHSRLPV 201 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI L L E + H NH E E+ A+ +L N G++LL+QSVLLK Sbjct: 202 VIPQRITDALCAMLAETRLQKILVTHVNHANEIDEDFSHAMDKLKNCGVVLLNQSVLLKN 261 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD IL L + I PYYLH D G +HF L + I L+ SG Sbjct: 262 VNDDAYILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDAQALSIYKQLQRITSGYLV 321 Query: 307 PFYILDLPGGYGKV 320 P ++ G K Sbjct: 322 PKLAREIGGEPNKT 335 >gi|45657183|ref|YP_001269.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|45600421|gb|AAS69906.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 429 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 107/331 (32%), Positives = 182/331 (54%), Gaps = 7/331 (2%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL+++ + + L + + + I+ +++ TP +L +P +PN PI + + Sbjct: 47 QLQNR-VKGFE-LERYFDLTESEKIGIENTI-RLNVSATPYYISLADPEDPNCPIRKMIL 103 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P+++E PEE DP+ + SP+KG+ H YPDR+LL H C VYCR C R V Sbjct: 104 PREDECIFSPEESPDPLHEERLSPVKGLTHMYPDRVLLFTNHECSVYCRHCMRGRKVSDS 163 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 K +L+ +D E YI+ +I +V+ +GGDPL LS ++ +L+ L I+HV+I R Sbjct: 164 KERMLT-EDLEICFDYIKSHPEITDVVLSGGDPLNLSDSKIDWILERLEKIEHVKICRLG 222 Query: 182 SRVPIVDPQRINPELIQCLKEA---GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 +R P+ P R+ +L ++ ++ NH E + EA AI +L AG+ + Sbjct: 223 TRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQFNHSKECTPEAKEAILKLLKAGVNVG 282 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q VLLK +ND + + L + +ELR++ YY++ P+L G+ FR + +G +I+ ++ Sbjct: 283 NQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMYDPELIPGSRGFRTPLAKGIEIIEFMR 342 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 KI G+ P ++ DLPGG GK+ + + Sbjct: 343 GKIGGMGIPQFVNDLPGGGGKITLTPNWYLG 373 >gi|116327784|ref|YP_797504.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116331557|ref|YP_801275.1| lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116120528|gb|ABJ78571.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116125246|gb|ABJ76517.1| Lysine 2,3-aminomutase [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 420 Score = 380 bits (977), Expect = e-103, Method: Composition-based stats. Identities = 114/331 (34%), Positives = 187/331 (56%), Gaps = 7/331 (2%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL+++ + + L + + + I++ +++ TP +L +P +P+DPI + I Sbjct: 36 QLQNR-VRGFE-LGRYFDLTESEKVGIEDTI-RLNVSATPYYISLTDPEDPDDPIRKMII 92 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P++ E PEE DP+ + SP+KG+ H YPDR+LL H C VYCR C R V Sbjct: 93 PREAETVFSPEESPDPLHEERLSPVKGLTHMYPDRVLLFTNHECSVYCRHCMRGRKVSDS 152 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 K +++ +D EA YI+ +I +V+ +GGDPL LS ++ ++L+ L I+HV+I R Sbjct: 153 KERMIT-EDLEACFEYIEACPEITDVVLSGGDPLNLSDSKIDRILERLEKIEHVKICRLG 211 Query: 182 SRVPIVDPQRINPELIQCLKEA---GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 +R P+ P RI +L ++ ++ NH E + EA AI +L AG+ + Sbjct: 212 TRNPVTLPFRITSDLCNIIESHNTHRLSIFCNTQFNHAKECTSEAKEAILKLLKAGVNVG 271 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q VLLKGIND EI+ L + +ELR++ YY++ P+L G+ FR + +G +I++ ++ Sbjct: 272 NQCVLLKGINDSGEIMLELHKKLLELRVRAYYMYDPELIPGSRGFRTPLAKGIEIISYMR 331 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 KI G+ P ++ DLPGG GKV + Sbjct: 332 GKIGGMGIPQFVNDLPGGGGKVTLTPDWYLG 362 >gi|24215400|ref|NP_712881.1| L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str. 56601] gi|24196517|gb|AAN49899.1|AE011436_14 L-lysine 2,3-aminomutase [Leptospira interrogans serovar Lai str. 56601] Length = 416 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 107/331 (32%), Positives = 182/331 (54%), Gaps = 7/331 (2%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL+++ + + L + + + I+ +++ TP +L +P +PN PI + + Sbjct: 34 QLQNR-VKGFE-LERYFDLTESEKIGIENTI-RLNVSATPYYISLADPEDPNCPIRKMIL 90 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P+++E PEE DP+ + SP+KG+ H YPDR+LL H C VYCR C R V Sbjct: 91 PREDECIFSPEESPDPLHEERLSPVKGLTHMYPDRVLLFTNHECSVYCRHCMRGRKVSDS 150 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 K +L+ +D E YI+ +I +V+ +GGDPL LS ++ +L+ L I+HV+I R Sbjct: 151 KERMLT-EDLEICFDYIKSHPEITDVVLSGGDPLNLSDSKIDWILERLEKIEHVKICRLG 209 Query: 182 SRVPIVDPQRINPELIQCLKEA---GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 +R P+ P R+ +L ++ ++ NH E + EA AI +L AG+ + Sbjct: 210 TRNPVTLPFRVTFDLCNIIESHNTDRLSIFCNTQFNHSKECTPEAKEAILKLLKAGVNVG 269 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q VLLK +ND + + L + +ELR++ YY++ P+L G+ FR + +G +I+ ++ Sbjct: 270 NQCVLLKEVNDSGQTMLELHKKLLELRVRAYYMYDPELIPGSRGFRTPLAKGIEIIEFMR 329 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 KI G+ P ++ DLPGG GK+ + + Sbjct: 330 GKIGGMGIPQFVNDLPGGGGKITLTPNWYLG 360 >gi|119475089|ref|ZP_01615442.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143] gi|119451292|gb|EAW32525.1| radical SAM domain protein [marine gamma proteobacterium HTCC2143] Length = 343 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 97/316 (30%), Positives = 170/316 (53%), Gaps = 2/316 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + ++L+N + K ++ + + + + + + + + +DP+ +Q +P +EL Sbjct: 29 IRDPEELFNLLELDKSKLPDALRGCDDFPLQVPRAFVDRMVKGDWSDPLLQQILPLGQEL 88 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 ++ P DP+ + + +P+ G++H+Y R+LL + C + CR+CFRR + S Sbjct: 89 DLHPGFSNDPLLELSDNPIPGLIHKYHGRVLLIVSGGCAINCRYCFRRHFPYQEN--NPS 146 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 ++ + AL YI++ + I EVI +GGDPL + L+ + + I HV+ILR HSR+P+V Sbjct: 147 QREWQQALDYIRQDNSIKEVILSGGDPLAANDNMLRDLTTRIADIPHVEILRVHSRMPVV 206 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 PQRI + L + IH+NHP E I A+ L G+ LL+Q+VLL GI Sbjct: 207 IPQRITSPSMNWLTNTRLTPVMVIHSNHPNEIDHHVIEALQTLKREGVTLLNQTVLLAGI 266 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND+PE L L + + PYYLH D +G +HF +T ++++ L+ ++ G P Sbjct: 267 NDNPEALLALSKRLFAAGVLPYYLHMLDKVSGAAHFEVTERRAKELITILRNQLPGYLIP 326 Query: 308 FYILDLPGGYGKVKID 323 + + G K+ I+ Sbjct: 327 KLVREQSGELSKMPIN 342 >gi|332160002|ref|YP_004296579.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] gi|325664232|gb|ADZ40876.1| hypothetical protein YE105_C0378 [Yersinia enterocolitica subsp. palearctica 105.5R(r)] Length = 281 Score = 380 bits (976), Expect = e-103, Method: Composition-based stats. Identities = 94/284 (33%), Positives = 153/284 (53%), Gaps = 3/284 (1%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 + P NP+DP+ Q + +EE P DP+ + S + G++H+Y +R LL + C Sbjct: 1 MQPGNPSDPLLLQVLTAREEFIAAPGFTNDPLDEQR-SVVPGLLHKYRNRALLLVKGGCA 59 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 + CR+CFRR + + AL Y+ + ++ E+IF+GGDPL+ L +L Sbjct: 60 INCRYCFRRHFPYQDNQG--NKANWRQALDYVHQHPELDEIIFSGGDPLMAKDNELSWLL 117 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + I H++ LR H+R+P+V P RI EL Q L ++ V + H NH E + Sbjct: 118 DEIESISHIKRLRIHTRLPVVIPARITAELCQRLSDSRLQVLMVTHINHSNEIDASLRDS 177 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 +++L AG+ LL+QSVLL+G+NDD E+LA L T + I PYY+H D G +HF + Sbjct: 178 MAQLKRAGVTLLNQSVLLRGVNDDDEVLATLSNTLFDAGILPYYIHVLDKVQGAAHFMVD 237 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330 +E ++++ L ++SG P ++ G K +D ++ Sbjct: 238 DDEARQLMKGLLSRVSGYLVPRLAREIGGQPSKTPLDLRLMQSE 281 >gi|254362093|ref|ZP_04978215.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213] gi|153093652|gb|EDN74611.1| lysine 2,3-aminomutase [Mannheimia haemolytica PHL213] Length = 330 Score = 379 bits (975), Expect = e-103, Method: Composition-based stats. Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 3/315 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + + DL + + +++ + + A + NPNDP+ Q + + Sbjct: 16 QAFNNPIDLLQFLELNPNDFEGDIAARKLFALRVPRMFAEKMEKGNPNDPLFLQAMSLQA 75 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E DP+ + SP I+H+Y +R+L L + C + CR+CFRR + + Sbjct: 76 EFIEAEGFVVDPL-EEQQSPAPNILHKYHNRLLFMLKNSCAINCRYCFRRHFPYEEVKS- 133 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + L YI E ++ EVI +GGDPL+ + L +L L I H++ LR HSR+P Sbjct: 134 -GKAVWQQGLTYIAEHPELEEVILSGGDPLMAKDQDLDWILTQLEQISHIKTLRIHSRLP 192 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P RI EL + L ++ V + H NH E +++L AG++LL+QSV+LK Sbjct: 193 VVIPNRITTELCERLSKSRLNVVLVTHINHANEIDAVFANKMAQLKKAGVVLLNQSVMLK 252 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ + L L E I PYYLH D AG SHF + E+ +I L+ SG Sbjct: 253 GVNDNAQTLKRLSDKLFEYGILPYYLHLFDKVAGASHFYIEDEQAGEIYRELQRITSGYL 312 Query: 306 QPFYILDLPGGYGKV 320 P ++ K+ Sbjct: 313 VPKLAREIAKEPNKI 327 >gi|326404849|ref|YP_004284931.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301] gi|325051711|dbj|BAJ82049.1| L-lysine 2,3-aminomutase [Acidiphilium multivorum AIU301] Length = 325 Score = 379 bits (974), Expect = e-103, Method: Composition-based stats. Identities = 150/321 (46%), Positives = 194/321 (60%), Gaps = 6/321 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +A L A L ++ ++ Y+ A+ +A LI +P DPI QFIP E Sbjct: 5 TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALI--GDPADPIGLQFIPDPAE 62 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L P ER DPIGD+ SP+ GIVHRYPDR LLK CPVYCRFCFRRE VG + G VL Sbjct: 63 LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + EAA ++ + + EVI TGGDPLILS +RL + LR I H+ LR H+RVP+ Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP RI P L+ L + P+++ +HANH EF EA A + L AGI LL QSVLL+G Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + L L T +E +KPYYLH D A GT+ F + I EG+ ++A+L+ ISG Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPITEGRALIAALRGTISGHAL 300 Query: 307 PFYILDLPGGYGKVKIDTHNI 327 P YILD P GK ++ + Sbjct: 301 PTYILDSPA--GKTTLEPSPV 319 >gi|148261362|ref|YP_001235489.1| lysine 2,3-aminomutase YodO family protein [Acidiphilium cryptum JF-5] gi|146403043|gb|ABQ31570.1| L-lysine 2,3-aminomutase [Acidiphilium cryptum JF-5] Length = 325 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 150/321 (46%), Positives = 194/321 (60%), Gaps = 6/321 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 TL +A L A L ++ ++ Y+ A+ +A LI +P DPI QFIP E Sbjct: 5 TLRTADQLIEAGLAPPAARAGLEAVAARYATAIPAPLAALI--GDPADPIGLQFIPDPAE 62 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L P ER DPIGD+ SP+ GIVHRYPDR LLK CPVYCRFCFRRE VG + G VL Sbjct: 63 LETAPHERADPIGDDALSPVPGIVHRYPDRALLKPTLACPVYCRFCFRREHVGPEGG-VL 121 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + EAA ++ + + EVI TGGDPLILS +RL + LR I H+ LR H+RVP+ Sbjct: 122 SEAELEAAFRWLADHDAVSEVILTGGDPLILSPRRLGAIFARLRAIPHISRLRLHTRVPL 181 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 DP RI P L+ L + P+++ +HANH EF EA A + L AGI LL QSVLL+G Sbjct: 182 ADPARITPALLAAL-DLDPPLFLVLHANHAREFGAEARAGLRALRRAGIPLLGQSVLLRG 240 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND + L L T +E +KPYYLH D A GT+ F + I EG+ ++A+L+ ISG Sbjct: 241 VNDSADTLRALFETMLECGVKPYYLHQLDPAPGTARFHVPIVEGRALIAALRGTISGHAL 300 Query: 307 PFYILDLPGGYGKVKIDTHNI 327 P YILD P GK ++ + Sbjct: 301 PTYILDSPA--GKTTLEPSPV 319 >gi|90416321|ref|ZP_01224253.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium HTCC2207] gi|90332046|gb|EAS47260.1| hypothetical protein GB2207_11603 [marine gamma proteobacterium HTCC2207] Length = 341 Score = 379 bits (973), Expect = e-103, Method: Composition-based stats. Identities = 98/324 (30%), Positives = 166/324 (51%), Gaps = 3/324 (0%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 +++ + +TS L + + EQ+ ++ + +++ + + P NP DP+ Q Sbjct: 20 WKVQLSQAVTSIDQLLSCLDLTIEQLSTSQQAAAEFALKVPRPFIQRMQPGNPKDPLLLQ 79 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E+ P+ +DP+ ++ H+P+ GIVH+Y +R+LL + C + CR+CFRR Sbjct: 80 VLPVAAEMVPSPDYNQDPLEESKHNPIAGIVHKYANRLLLVISPACAINCRYCFRRHFPY 139 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + S + + AL YI+ I EVI++GGDPL + L + + I H++ LR Sbjct: 140 DENRQ--SKQQWQTALDYIRNDKSINEVIYSGGDPLAANDTFLSWLTSEIADIAHIKRLR 197 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P RI+ + + +H NH E ++ AI +L AG+ +L+ Sbjct: 198 IHTRLPVVIPARIDQGFLNWATATRLKPIVVLHINHANEIDDDVAEAIRKLTGAGMQVLN 257 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+GIND LA+L + + PYYLH D AG HF L +++ L+ Sbjct: 258 QSVLLRGINDSAVTLADLSERLFDCGVTPYYLHLCDPVAGAQHFDLDETTAKQLYGQLQT 317 Query: 300 KISGLCQPFYILDLPGGYGKVKID 323 + G P + ++P K I Sbjct: 318 LLPGFLVPKLVREIPDRESKTLIS 341 >gi|167469180|ref|ZP_02333884.1| iron-sulfur cluster-binding protein, KamA family [Yersinia pestis FV-1] Length = 315 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 93/304 (30%), Positives = 153/304 (50%), Gaps = 4/304 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T +L + + + + + + + + P N +DP+ Q + +EE Sbjct: 15 ITDPDELLRILFLNEHPHLQQGSGARRLFPLRVPRAFVARMQPGNASDPLLLQVLTAREE 74 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P DP+ + S + G++H+Y +R LL + C V CR+CFRR Sbjct: 75 FITAPGFTHDPLDEQR-SVVPGLLHKYRNRALLLVKGGCAVNCRYCFRRHFPYQDNQG-- 131 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + AL YI++ ++ E+IF+GGDPL+ L +L L IKH++ LR H+R+P+ Sbjct: 132 NKANWLQALDYIRQHPELDEIIFSGGDPLMAKDHELSWLLDQLEDIKHIRRLRIHTRLPV 191 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L Q L + V + H NH E +++RL AG+ LL+QSVLL+G Sbjct: 192 VIPARITATLCQRLGSSRLQVLMVTHINHANEIDPPLRDSMARLKQAGVTLLNQSVLLRG 251 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +N+D ++LA L + I PYY+H D G +HF + +E +++ L ++SG Sbjct: 252 VNNDADVLATLSNALFDAGILPYYIHVLDKVQGAAHFMVDDDEAGQLMKGLLSRVSGYLV 311 Query: 307 PFYI 310 P Sbjct: 312 PRLT 315 >gi|189500360|ref|YP_001959830.1| lysine 2,3-aminomutase YodO family protein [Chlorobium phaeobacteroides BS1] gi|189495801|gb|ACE04349.1| lysine 2,3-aminomutase YodO family protein [Chlorobium phaeobacteroides BS1] Length = 358 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 119/354 (33%), Positives = 186/354 (52%), Gaps = 14/354 (3%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q+++ + S Q L + E+ I+ + +TP A+L++ +PN PI RQ I Sbjct: 8 QMQN-LVDSVQKLEQYINVTDEERRTIESLDTK--WGVTPYFASLMDKDDPNCPIRRQVI 64 Query: 62 PQKEELNILPEEREDPIGDNNHS----PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 P +E + N S I +Y DRI ++ C +YCR CFR+E+ Sbjct: 65 PSMQEKVNEFGMDNYLLWKENRSTEEVRPDSIARQYHDRIAFTVIETCAIYCRHCFRKEL 124 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 V Q + D + LA+I E +I +V+ TGGDPL+LS +L +++ LR I HV++ Sbjct: 125 VVDQDLKL--RMDVDEGLAWIAEHPEIRDVLITGGDPLLLSDDKLARLIGRLREIPHVEM 182 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGII 236 +R SR+PIV PQRI L + + K PV+I NHP E +EE A+ L + GI Sbjct: 183 IRIGSRLPIVLPQRITEGLKKAIGGFHKVPVWINTQCNHPKEITEETAKAVYELMSCGIN 242 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA- 295 + +Q+VLLKGINDD E L + + +RI+PYY+ + + A G HFR +E+G +++ Sbjct: 243 VGNQAVLLKGINDDVETFRELHQMLLRIRIRPYYVFYCEPAPGIDHFRTPVEKGAELIRD 302 Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYP 348 +L+ +GL QP Y+ L GKV + + + + Y + +H P Sbjct: 303 ALRGHTTGLAQPMYV--LATNIGKVPLMPDYYMIDKNDKEYELRNHTGKTTKIP 354 >gi|307245529|ref|ZP_07527616.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|307254485|ref|ZP_07536321.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|307258943|ref|ZP_07540674.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] gi|306853588|gb|EFM85806.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306862535|gb|EFM94493.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 9 str. CVJ13261] gi|306866967|gb|EFM98824.1| Uncharacterized kamA family protein [Actinobacillus pleuropneumoniae serovar 11 str. 56153] Length = 333 Score = 378 bits (972), Expect = e-103, Method: Composition-based stats. Identities = 90/315 (28%), Positives = 151/315 (47%), Gaps = 3/315 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + L + ++ + +++ + + + NDP+ Q + E Sbjct: 19 QAFNDPITLLEHLELNPKEFETAITARKLFALRVPRPFVEKMQKGDKNDPLFLQAMSAAE 78 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E + +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + + Sbjct: 79 EFVQVEGFVKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDEVKS- 136 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P Sbjct: 137 -GKAVWQQGLDYIAAHTELEEVIFSGGDPLMAKDSELDWLISALEQIPHIKTLRIHTRLP 195 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P RI +L L ++ V + H NHP E E +++L + ++LL+QSVLLK Sbjct: 196 VVIPSRITEQLCDRLSKSRLKVVMVTHINHPNEVDEVLADKLNQLRQSKVVLLNQSVLLK 255 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 G+ND+ +IL L E + PYYLH D G SHF + + +I L+ SG Sbjct: 256 GVNDNAQILKALSNKLFESGVLPYYLHLLDKVEGASHFFIEDRQAAEIYKELQRITSGYL 315 Query: 306 QPFYILDLPGGYGKV 320 P ++ K Sbjct: 316 VPKLAREIAREPNKT 330 >gi|167854986|ref|ZP_02477761.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755] gi|167853943|gb|EDS25182.1| hypothetical protein HPS_05138 [Haemophilus parasuis 29755] Length = 337 Score = 378 bits (971), Expect = e-103, Method: Composition-based stats. Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 3/310 (0%) Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70 +DL N + ++ +++ + A + + DP+ Q I +EE + Sbjct: 25 PEDLLNYLELNIADFEQDLTARKLFALRVPRPFAEKMKKGDRADPLFLQAITLQEEFTNV 84 Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + + Sbjct: 85 DGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPYDEVKS--GKAT 141 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + +L YI+ S++ EVI +GGDPL+ + + L I H+ +R HSR+P+V P Sbjct: 142 WQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQLEQISHINTVRIHSRLPVVIPN 201 Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 RI EL + L ++ V + H NH E + + +L + ++LL+QSVLLKGIND+ Sbjct: 202 RITDELCERLLQSRLKVVLVTHINHANEIDDIFAEKMQKLKQSNVVLLNQSVLLKGINDN 261 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 + L L I PYYLH D AG SHF + +I L+ SG P Sbjct: 262 AQTLKALSDKLFRNGILPYYLHLLDKVAGASHFYIEDSRAFEIYRELQRITSGYLVPKLA 321 Query: 311 LDLPGGYGKV 320 ++ K Sbjct: 322 REMAKEPNKT 331 >gi|15601964|ref|NP_245036.1| hypothetical protein PM0099 [Pasteurella multocida subsp. multocida str. Pm70] gi|12720310|gb|AAK02183.1| unknown [Pasteurella multocida subsp. multocida str. Pm70] Length = 337 Score = 377 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 98/314 (31%), Positives = 152/314 (48%), Gaps = 3/314 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++ + L + E +++ E + + + + NP DP+ Q + ++E Sbjct: 23 AISDPKILLETLNLPTENVEQDLEARRLFPLRVPLPFVEKMQKGNPQDPLFLQVMSFRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + +DP+ + + + ++H+Y +R+LL + C V CR+CFRR + Sbjct: 83 FLQVEGFSKDPL-EEQDAVVPSVLHKYHNRLLLMVKGGCAVNCRYCFRRHFPYADNKG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + AL YI +I EVIF+GGDPL+ L ++K L I H+Q LR H+R+P+ Sbjct: 140 NKANWQKALDYIANHPEIEEVIFSGGDPLMAKDHELDWLIKNLENIPHLQRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI + Q L E+ + H NHP E AI++L G++LL+Q+VLLKG Sbjct: 200 VIPQRITADFCQTLAESRFQTVLVTHINHPNEIDAFFAQAINKLREVGVLLLNQAVLLKG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND+ IL L I PYYLH D G SHF L I L+ SG Sbjct: 260 INDNAHILKQLGDKLFATNILPYYLHLLDKVEGASHFYLDDSRALNIYKELQSLTSGYLV 319 Query: 307 PFYILDLPGGYGKV 320 P ++ K Sbjct: 320 PKLAREIAKEPNKT 333 >gi|219870442|ref|YP_002474817.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis SH0165] gi|219690646|gb|ACL31869.1| lysine 2,3-aminomutase YodO family protein [Haemophilus parasuis SH0165] Length = 337 Score = 377 bits (970), Expect = e-102, Method: Composition-based stats. Identities = 92/310 (29%), Positives = 149/310 (48%), Gaps = 3/310 (0%) Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70 +DL N + ++ +++ + A + + DP+ Q I +EE + Sbjct: 25 PEDLLNYLELNIADFEQDLTARKLFALRVPRPFAEKMKKEDRADPLFLQAITLQEEFTNV 84 Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + + Sbjct: 85 DGFVQDPL-EEQHSPAPNILHKYHNRLLFMVKNSCAINCRYCFRRHFPYDEVKS--GKAT 141 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + +L YI+ S++ EVI +GGDPL+ + + L I H+ +R HSR+P+V P Sbjct: 142 WQKSLDYIKAHSEVEEVILSGGDPLMAKDHEIDWIFTQLEQISHINTVRIHSRLPVVIPN 201 Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 RI EL + L ++ V + H NH E + + +L + ++LL+QSVLLKGIND+ Sbjct: 202 RITDELCERLSQSRLKVVLVTHINHANEIDKIFAEKMQKLKQSNVVLLNQSVLLKGINDN 261 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 + L L I PYYLH D AG SHF + +I L+ SG P Sbjct: 262 AQTLKALSDKLFRYGILPYYLHLLDKVAGASHFYIEDSRAFEIYRELQRITSGYLVPKLA 321 Query: 311 LDLPGGYGKV 320 ++ K Sbjct: 322 REMAKEPNKT 331 >gi|315634854|ref|ZP_07890136.1| KamA family protein [Aggregatibacter segnis ATCC 33393] gi|315476406|gb|EFU67156.1| KamA family protein [Aggregatibacter segnis ATCC 33393] Length = 339 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 96/314 (30%), Positives = 153/314 (48%), Gaps = 3/314 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 ++ + L + E + E +++ + + NP DP+ Q + +E Sbjct: 24 ISDPKILLQHLELPLESFKQDIEARKLFAMRVPLPFVEKMEKGNPKDPLFLQVMSSADEF 83 Query: 68 NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 +DP+ + + + I+H+Y +R+L + C V CR+CFRR + Sbjct: 84 LQAEGFSKDPLEEQEDKNVVSNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPY--QDNKG 141 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YI E+ +I EVIF+GGDPL+ L+ ++K L I H++ LR HSR+P+ Sbjct: 142 TKQNWQKALQYIAERPEIEEVIFSGGDPLMAKDHELEWLIKHLENIPHLKRLRIHSRLPV 201 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI + L + + H NH E + A+++L + G++LL+QSVLLK Sbjct: 202 VIPQRITDTFCRLLAQTRLQKILVTHVNHANEIDADFAHAMAKLKDCGVVLLNQSVLLKN 261 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD IL L + I PYYLH D G +HF L KI L+ SG Sbjct: 262 VNDDALILKTLSDRLFSVGILPYYLHLLDKVEGATHFYLDDARALKIYKELQRISSGYLV 321 Query: 307 PFYILDLPGGYGKV 320 P ++ G K Sbjct: 322 PKLAREIGGEPNKT 335 >gi|52424562|ref|YP_087699.1| KamA protein [Mannheimia succiniciproducens MBEL55E] gi|52306614|gb|AAU37114.1| KamA protein [Mannheimia succiniciproducens MBEL55E] Length = 336 Score = 377 bits (969), Expect = e-102, Method: Composition-based stats. Identities = 95/314 (30%), Positives = 152/314 (48%), Gaps = 3/314 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +++ + L + ++ ++ +++ + + N DP+ Q + +E Sbjct: 22 SISDPEVLLKTLSLPIDKFEKDIHARKLFAMRVPLPFVRKMELGNAQDPLFLQAMSSADE 81 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 +DP+ + I+H+Y +R+LL + C + CR+CFRR + Sbjct: 82 FLTADGFSKDPL-EEQQVVAPNILHKYKNRLLLMVKGGCAINCRYCFRRHFPYADNQG-- 138 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + AL YI QI EVIF+GGDPL+ L ++K L I H+Q LR H+R+P+ Sbjct: 139 NKANWQKALDYISANPQIEEVIFSGGDPLMAKDHELDWLIKKLEKIPHLQRLRIHTRLPV 198 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI + L E+ + H NH E E+ A+++L NAG++LL+QSVLLK Sbjct: 199 VIPQRITGAFCKILTESRLNTVLVTHINHGNEIDEQLTRALNKLKNAGVVLLNQSVLLKN 258 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND+ + L NL I PYYLH D G SHF + + +I L+ SG Sbjct: 259 INDNAQTLKNLSDKLFRAGILPYYLHLLDKVEGASHFYVPDQRAVEIYRELQSLTSGYLV 318 Query: 307 PFYILDLPGGYGKV 320 P ++ K Sbjct: 319 PKLAREIAHEPNKT 332 >gi|190575198|ref|YP_001973043.1| putative methylase protein [Stenotrophomonas maltophilia K279a] gi|190013120|emb|CAQ46752.1| putative methylase protein [Stenotrophomonas maltophilia K279a] Length = 346 Score = 376 bits (967), Expect = e-102, Method: Composition-based stats. Identities = 101/321 (31%), Positives = 157/321 (48%), Gaps = 2/321 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + L Q L + + + +++ + + +P DP+ RQ + Sbjct: 28 QLWRQALRDPQALLARLQLDPAALGVSEAAMAQFALRVPEGFVARMRKGDPADPLLRQVL 87 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE+ P D +GD G++ +Y R LL C + CR+CFRR Sbjct: 88 PIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCRYCFRRHF--DY 145 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + A+A I I EVI +GGDPL L+ +L ++ LR I H++ LR H Sbjct: 146 GAENAAKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDALRAIPHIRRLRIH 205 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +R+PIV P+R++ EL+ L P+ I +HANH EF AA++RL G LL+Q+ Sbjct: 206 TRLPIVLPERVDDELVSWLGSLPWPLAIVVHANHANEFDASVDAAMARLRGIGAQLLNQA 265 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+ND + L +L + PYYLH D G +HF + + ++A L ++ Sbjct: 266 VLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTRAKALIAGLTARL 325 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 SG P + +LPG K + Sbjct: 326 SGYLVPKLVRELPGDPSKRPV 346 >gi|260913742|ref|ZP_05920218.1| KamA family protein [Pasteurella dagmatis ATCC 43325] gi|260632281|gb|EEX50456.1| KamA family protein [Pasteurella dagmatis ATCC 43325] Length = 337 Score = 376 bits (966), Expect = e-102, Method: Composition-based stats. Identities = 103/314 (32%), Positives = 156/314 (49%), Gaps = 3/314 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++ + L N + E ++ + + + + NP DP+ Q + +E Sbjct: 23 AISDPKLLLNTLNLPAEAFEKDIVARRLFPLRVPLPFVQRMEKGNPKDPLFLQVMSSADE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ + + + ++H+Y +R+LL + C V CR+CFRR + Sbjct: 83 FIQVEGFTTDPL-EEQEAVVPSVLHKYHNRLLLMVKGGCAVNCRYCFRRHFPYADNKG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + AL YI + +I EVIF+GGDPL+ L ++K L I H+Q LR H+R+P+ Sbjct: 140 NKVNWQKALDYIAIRPEIEEVIFSGGDPLMAKDHELNWLIKNLENIPHLQRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI PEL + L E+ + H NHP E AAI +L AG++LL+QSVLLK Sbjct: 200 VIPQRITPELCKILSESRFQTVLVTHINHPNEIDTTLSAAIFKLKQAGVVLLNQSVLLKN 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD +IL L + I PYYLH D G SHF + E+ I L+ SG Sbjct: 260 INDDAQILKQLSDKLFSINILPYYLHLLDKVEGASHFYIEDEKALNIYKILQSITSGYLV 319 Query: 307 PFYILDLPGGYGKV 320 P ++ K Sbjct: 320 PKLAREIAKEPNKT 333 >gi|322514442|ref|ZP_08067484.1| KamA family protein [Actinobacillus ureae ATCC 25976] gi|322119649|gb|EFX91711.1| KamA family protein [Actinobacillus ureae ATCC 25976] Length = 333 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 91/307 (29%), Positives = 151/307 (49%), Gaps = 3/307 (0%) Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73 L + ++ + +++ + + + NDP+ Q + EE + Sbjct: 27 LLEHLELNPKEFETAITARKLFALRVPRPFVGKMRKGDKNDPLFLQAMSAAEEFLQMQGF 86 Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 +DP+ + HSP I+H+Y +R+L + + C + CR+CFRR + + + Sbjct: 87 VKDPL-EEQHSPAPNILHKYHNRLLFMIKNSCAINCRYCFRRHFPYDEVKS--GKAVWQQ 143 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 L YI +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+P+V P RI Sbjct: 144 GLDYIAAHTELEEVIFSGGDPLMAKDSELNWLISALEQIPHIKTLRIHTRLPVVIPSRIT 203 Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 +L L ++ V I H NHP E E + +++L A ++LL+QSVLLKGIND+ + Sbjct: 204 EQLCNRLSKSRLKVVIVTHINHPNEVDEVLVDRLNQLRQANVVLLNQSVLLKGINDNAQT 263 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 L L + + PYYLH D G SHF + ++ +I L+ SG P ++ Sbjct: 264 LKVLSDKLFDSGVLPYYLHLLDRVEGASHFFIEDQQAAEIYKELQRISSGYLVPKLAREI 323 Query: 314 PGGYGKV 320 K Sbjct: 324 AREPNKT 330 >gi|109896769|ref|YP_660024.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas atlantica T6c] gi|109699050|gb|ABG38970.1| L-lysine 2,3-aminomutase [Pseudoalteromonas atlantica T6c] Length = 341 Score = 375 bits (964), Expect = e-102, Method: Composition-based stats. Identities = 91/326 (27%), Positives = 151/326 (46%), Gaps = 4/326 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + L + + + + + + A I +PND + +Q Sbjct: 16 WQKELSSAFSDPVALLKYLDLDPTEFIDDIAARRLFPMRVPLPFAARIKKGDPNDALFKQ 75 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 P ++E DP+ + + G++H+Y R+LL + C V CR+CFRR Sbjct: 76 VFPSEKEFLTDLNYVLDPLQEQQNEK-PGVLHKYKSRVLLLVRGGCAVNCRYCFRRHFPY 134 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 S L+ + + L YI++ I EVI++GGDPL+ L + + I H++ +R Sbjct: 135 S--DNHLNKHEWQETLDYIKQDKNINEVIYSGGDPLMAKDDFLAWLTDEIAEITHIKRIR 192 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P RI P+LI+ + + +H NHP E + L AG+ LL+ Sbjct: 193 IHTRLPVVIPARITPQLIEWFTKTRLKPVMVLHINHPQEIDFALQEVLQELTKAGVTLLN 252 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q VLLK IND ++ L + + PYYLH D G HF + + I+A + + Sbjct: 253 QGVLLKDINDSADVQVALSERLFDAGVMPYYLHVMDKVQGAQHFDQDDKIAKDIMAKMIK 312 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325 ++ G P + ++ G GK ID + Sbjct: 313 RLPGFLVPKLVREIGGQPGKTPIDLN 338 >gi|89092066|ref|ZP_01165021.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92] gi|89083801|gb|EAR63018.1| hypothetical protein MED92_07861 [Oceanospirillum sp. MED92] Length = 337 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 105/323 (32%), Positives = 169/323 (52%), Gaps = 3/323 (0%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q L + + L + + +D ++ S+ +S+ + + I P NP DP+ RQ Sbjct: 16 WQHLLSNAIDDPKALLEHLNLPQNLLDGAQKGSDLFSMKVPEPYLSRIEPGNPKDPLLRQ 75 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P +EL + DP+ + + + G++H+Y R+LL L C + CR+CFRR Sbjct: 76 VLPLNDELADVSGFVADPLAEMDANHSDGLIHKYKGRVLLILSGACAINCRYCFRRHFPY 135 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + L S+ + L Y++ I EVIF+GGDPL S RL+++++ L I H+ LR Sbjct: 136 QEN--RLGSEQWQQVLNYLKSDPTISEVIFSGGDPLATSDNRLERMIRDLEEIPHLSRLR 193 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+PIV PQR+ L+Q L+++ + +HANHP E + R+ ++ I +L+ Sbjct: 194 IHSRLPIVIPQRVTDRLLQILRDSRFSTVMVLHANHPNELDGSTAESAKRMKDSHITVLN 253 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLKGIND ++L L E I PYYL D G +HF + EE K+ ++ Sbjct: 254 QAVLLKGINDQVDVLQQLSEKLFEQGILPYYLFTLDPVKGAAHFDIPDEEAVKLHQQMQA 313 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 + G P ++PG K + Sbjct: 314 VLPGYLVPKLAREIPGKTEKTLL 336 >gi|88812696|ref|ZP_01127943.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231] gi|88790112|gb|EAR21232.1| hypothetical protein NB231_00885 [Nitrococcus mobilis Nb-231] Length = 339 Score = 375 bits (963), Expect = e-102, Method: Composition-based stats. Identities = 94/325 (28%), Positives = 163/325 (50%), Gaps = 3/325 (0%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + +L + ++ + + + + + + N DP+ RQ Sbjct: 17 WQQELARAVRDPAELLRLLELPATLLEPARRAARLFPLRVPRSYLARMERGNLEDPLLRQ 76 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P EL+ P DP+GD S G++H+Y R+LL C + CR+CFRR Sbjct: 77 VLPLTAELDPAPGFVTDPVGDLGASKGAGVLHKYHGRVLLITTGACAINCRYCFRRHFPY 136 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +Q +AL YI +++++ EVI +GGDPL L+ +RL +++ L I H++ LR Sbjct: 137 AQANAAAG--QWHSALRYIAQRTEVEEVILSGGDPLTLADRRLAQLVTQLVDIPHIRRLR 194 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P R+ EL++ + + +H NH E +A+ RL AG+ +L+ Sbjct: 195 IHTRLPVVLPARVTDELVEWFAGSRLQPIMVLHTNHANELDATVTSAVKRLREAGVTMLN 254 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+G+ND+ L L + + I PYYLH D AG HF +T + +++ + Sbjct: 255 QTVLLRGVNDEAMALTALHQRLFDSGILPYYLHLLDRVAGARHFAITQDRARELHRQMAR 314 Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324 ++ G P + ++ G GK + Sbjct: 315 RLPGYLVPRLVQEIEGAPGKHWLPP 339 >gi|153206246|ref|ZP_01945509.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177'] gi|154706630|ref|YP_001423526.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111] gi|212217836|ref|YP_002304623.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154] gi|120577376|gb|EAX34000.1| KamA family protein [Coxiella burnetii 'MSU Goat Q177'] gi|154355916|gb|ABS77378.1| lysine 2,3-aminomutase [Coxiella burnetii Dugway 5J108-111] gi|212012098|gb|ACJ19478.1| lysine 2,3-aminomutase [Coxiella burnetii CbuK_Q154] Length = 342 Score = 374 bits (962), Expect = e-102, Method: Composition-based stats. Identities = 95/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + +++ +L+N + + + +++++++ + + NPNDP+ Q Sbjct: 6 WQTQLKRAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQ 65 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +PQ EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Sbjct: 66 ILPQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPY 125 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 Q Y++ S I EVI +GGDPL++ + L + ++ I ++ LR Sbjct: 126 EQN--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLR 183 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+ Sbjct: 184 IHTRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLN 243 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLK +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + Sbjct: 244 QSVLLKNVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMK 303 Query: 300 KISGLCQPFYILDLPGGYGKVKID 323 + G P ++ ++PG K + Sbjct: 304 HLPGYLVPKFVREIPGALSKTPLS 327 >gi|94500575|ref|ZP_01307106.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65] gi|94427365|gb|EAT12344.1| hypothetical protein RED65_15933 [Oceanobacter sp. RED65] Length = 345 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 114/331 (34%), Positives = 170/331 (51%), Gaps = 4/331 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + SAQDL + E ++ + + + I + + I P NP DP+ Q Sbjct: 17 WQKQLSQAQISAQDLLEQLSMPLELLEGAELGAAQFPIRVPQSFIDRIEPGNPQDPLFLQ 76 Query: 60 FIPQKEELNILP-EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 P E P DP+ +N +P+ GIVH+Y R+LL + C ++CR+CFRR Sbjct: 77 IWPFSAEGETPPLGFVTDPLEENAANPVPGIVHKYQGRVLLIVNGSCAIHCRYCFRRHFP 136 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 LS + E AL YI+ I EVI +GGDPL + KRL K++ + I HV L Sbjct: 137 YEDNNLSLS--EWEQALTYIENNPSINEVIMSGGDPLSSNDKRLFKLIDAIEAIPHVTRL 194 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R HSR+PI P RI P+L Q L + + + +HANH E S++ +A++RL + I LL Sbjct: 195 RIHSRLPITLPNRITPDLCQRLGSSRLNIVMVVHANHGNEISQDVHSAMTRLRSENIHLL 254 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKGIND + L +L + PYYLH D G H+ + + ++ L+ Sbjct: 255 NQTVLLKGINDTTQALIDLSEQLFAAGVMPYYLHLLDPVIGAHHYHVATDVALSLMDQLQ 314 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 ++ G P + ++PG K I T K Sbjct: 315 AQLPGFLVPKLVREVPGEASKTLIYTQKPPK 345 >gi|29655147|ref|NP_820839.1| radical SAM domain-containing protein [Coxiella burnetii RSA 493] gi|161831507|ref|YP_001597682.1| KamA family protein [Coxiella burnetii RSA 331] gi|29542416|gb|AAO91353.1| lysine 2,3-aminomutase [Coxiella burnetii RSA 493] gi|161763374|gb|ABX79016.1| KamA family protein [Coxiella burnetii RSA 331] Length = 342 Score = 374 bits (961), Expect = e-101, Method: Composition-based stats. Identities = 95/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + +++ +L+N + + + +++++++ + + NPNDP+ Q Sbjct: 6 WQTQLKRAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQ 65 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +PQ EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Sbjct: 66 ILPQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPY 125 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 Q Y++ S I EVI +GGDPL++ + L + ++ I ++ LR Sbjct: 126 EQN--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLR 183 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+ Sbjct: 184 IHTRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLN 243 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLK +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + Sbjct: 244 QSVLLKNVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMIK 303 Query: 300 KISGLCQPFYILDLPGGYGKVKID 323 + G P ++ ++PG K + Sbjct: 304 HLPGYLVPKFVREIPGALSKTPLS 327 >gi|212211887|ref|YP_002302823.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212] gi|212010297|gb|ACJ17678.1| lysine 2,3-aminomutase [Coxiella burnetii CbuG_Q212] Length = 342 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 95/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + +++ +L+N + + + +++++++ + + NPNDP+ Q Sbjct: 6 WQTQLKRAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQ 65 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +PQ EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Sbjct: 66 ILPQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPY 125 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 Q Y++ S I EVI +GGDPL++ + L + ++ I ++ LR Sbjct: 126 EQN--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLR 183 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+ Sbjct: 184 IHTRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLN 243 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLK +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + Sbjct: 244 QSVLLKNVNDDSKALIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMK 303 Query: 300 KISGLCQPFYILDLPGGYGKVKID 323 + G P ++ ++PG K + Sbjct: 304 HLPGYLVPKFVREIPGALSKTPLS 327 >gi|327538979|gb|EGF25616.1| KamA family protein [Rhodopirellula baltica WH47] Length = 381 Score = 374 bits (960), Expect = e-101, Method: Composition-based stats. Identities = 106/319 (33%), Positives = 177/319 (55%), Gaps = 4/319 (1%) Query: 6 KTLTSAQDLYNANLIKKE--QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 + + SA +L + D + + + + A + P +PNDP+ RQ +P Sbjct: 65 RAIRSAGELRRYLNLDPPVGDPDGSDAEDHGFPVFVPLEFAARMKPGDPNDPLLRQVLPL 124 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 EE N DP+GD + + G++H+Y R L C ++CR+CFRRE S+ Sbjct: 125 PEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITTGACGIHCRYCFRREFPYSENS 184 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 + E AL Y++E I EV+ +GGDPL L+ + K+++ + I HV+ LR+H+R Sbjct: 185 SR--GDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSVAKLMQQIESIPHVRRLRWHTR 242 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 +PIV P R+ I+ ++ + ++ +H NHP E E AA+ RL +AGI +L+Q+VL Sbjct: 243 MPIVIPSRVTDAWIERMQASRLTSWVVVHCNHPAELDSETGAALMRLVDAGIPVLNQAVL 302 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+NDD ++L +L R ++LR+ PYYLH D G +HF + E G+ +V+ L+ ++ G Sbjct: 303 LRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAHFEVDQECGRALVSQLESRLPG 362 Query: 304 LCQPFYILDLPGGYGKVKI 322 P ++ + G K ++ Sbjct: 363 FAVPRFVCEQAGQASKTRL 381 >gi|165919300|ref|ZP_02219386.1| KamA family protein [Coxiella burnetii RSA 334] gi|165917023|gb|EDR35627.1| KamA family protein [Coxiella burnetii RSA 334] Length = 342 Score = 373 bits (959), Expect = e-101, Method: Composition-based stats. Identities = 96/324 (29%), Positives = 168/324 (51%), Gaps = 3/324 (0%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + +++ +L+N + + + +++++++ + + NPNDP+ Q Sbjct: 6 WQTQLKRAISNPIELWNELQLDPQTLPSAWRVADNFALRVPRGFVERMEKGNPNDPLLLQ 65 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +PQ EL P DP+ + + + G++H+Y R+L+ L C V+CR+CFRR Sbjct: 66 ILPQAHELIAYPGYSSDPLNEKQSNLIPGLLHKYHGRVLITLSGACAVHCRYCFRRHFPY 125 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 Q Y++ S I EVI +GGDPL++ + L + ++ I ++ LR Sbjct: 126 EQN--TPGRAGWGRIFDYLKANSSINEVILSGGDPLMIKDEALMGFVSNVQAILTIKRLR 183 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P+RI EL+ L + IH NHP E ++ I A+ L + + LL+ Sbjct: 184 IHTRLPIVIPERITAELVNLLSRTRLQTTVVIHCNHPNEINQAVIDALDSLRRSKVSLLN 243 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLK +NDD + L +L + + PYYLH D G +HF ++ ++ Q +A + + Sbjct: 244 QSVLLKNVNDDSKTLIDLSERLFDAGVLPYYLHLLDHVTGAAHFEVSEQKAQWFLAEMMK 303 Query: 300 KISGLCQPFYILDLPGGYGKVKID 323 + G P +I ++PG K + Sbjct: 304 HLPGYLVPKFIREIPGALSKTPLS 327 >gi|312110886|ref|YP_003989202.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. Y4.1MC1] gi|311215987|gb|ADP74591.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. Y4.1MC1] Length = 378 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 118/343 (34%), Positives = 188/343 (54%), Gaps = 18/343 (5%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 + K +T+ + + I KE+ +++K+I+N Y + NLIN +PNDPI + IP Sbjct: 3 QPKYITNIEKITQ---IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPN 59 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 + ELN D + + + G H+Y LL + VC YCRFCFR+ + S Sbjct: 60 EGELNE--YGSWDASDEEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVK 117 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 +S D + YI + +I V+ TGGD LIL+ K+++++++ LR I HV+I+RF S+ Sbjct: 118 EAMS--DVTPGIEYIAQTPEINNVLLTGGDSLILATKKIRQIVERLRAIDHVKIIRFGSK 175 Query: 184 VPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 +P+ +P RI + EL+ ++ K +Y+ H NHP E +EEA A L +AG+I++ Sbjct: 176 LPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVV 235 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+ +LKGINDDPE+LA L+ + PYY AG S F LT+E+ +IV K Sbjct: 236 NQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEKVYQIVEQAK 295 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 + SGL + ++ + GK++I + NG + H Sbjct: 296 ARTSGLGKRVRLV-MSHSSGKIEI-----LAIENGKAYLKYHQ 332 >gi|170718464|ref|YP_001783679.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus 2336] gi|168826593|gb|ACA31964.1| lysine 2,3-aminomutase YodO family protein [Haemophilus somnus 2336] Length = 337 Score = 373 bits (958), Expect = e-101, Method: Composition-based stats. Identities = 102/315 (32%), Positives = 154/315 (48%), Gaps = 3/315 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K ++ +L N + E + + + + NPNDP+ Q + + Sbjct: 22 KAISDPIELLNCLELPIESFQYDIAARQLFPLRVPFPFVKKMEKGNPNDPLFLQVMASQH 81 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E + +DP+ + H+ + I+H+Y +R+LL + + C V CR+CFRR ++ Sbjct: 82 EFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCRYCFRRHFPYAENKG- 139 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + + +L YI ++I EVIF+GGDPL+ L ++K L I H+ LR H+R+P Sbjct: 140 -NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKELENIPHLHTLRIHTRLP 198 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V PQRI EL + L E+ I H NHP E E A+ +L +A + LL+QSV+LK Sbjct: 199 VVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKKLKHANVTLLNQSVVLK 258 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 IND+ IL L + I PYYLH D G SHF L E I L+ SG Sbjct: 259 NINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDESAAAIYKELQRISSGYL 318 Query: 306 QPFYILDLPGGYGKV 320 P ++ K Sbjct: 319 VPKLAREIAHEPNKT 333 >gi|293391874|ref|ZP_06636208.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D7S-1] gi|290952408|gb|EFE02527.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D7S-1] Length = 343 Score = 372 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 3/314 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 ++ + L + E + E +++ + + N DP+ Q + +E Sbjct: 28 ISDPKILLQHLELPLEPFKQDIEARKLFAMRVPLPFVAKMEKGNARDPLFLQVMSFADEF 87 Query: 68 NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 +DP+ + + + I+H+Y +R+L + C V CR+CFRR Q Sbjct: 88 LQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYDQNKG-- 145 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YI +I EVI +GGDPL+ + ++K L + H+ LR HSR+P+ Sbjct: 146 NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKHLENLPHLTRLRIHSRLPV 205 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI + L + + H NH E E+ A+ +L N G++LL+QSVLLK Sbjct: 206 VIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMDKLKNCGVVLLNQSVLLKN 265 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD IL L + I PYYLH D G +HF L + +I L+ SG Sbjct: 266 VNDDAHILKALSDRLFSVGILPYYLHLLDKVEGAAHFYLDDAQALRIYKQLQRITSGYLV 325 Query: 307 PFYILDLPGGYGKV 320 P ++ G K Sbjct: 326 PKLAREIGGEPNKT 339 >gi|332289569|ref|YP_004420421.1| conserved hypothetical protein, radical SAM superfamily [Gallibacterium anatis UMN179] gi|330432465|gb|AEC17524.1| conserved hypothetical protein, radical SAM superfamily [Gallibacterium anatis UMN179] Length = 332 Score = 372 bits (957), Expect = e-101, Method: Composition-based stats. Identities = 99/294 (33%), Positives = 142/294 (48%), Gaps = 3/294 (1%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 +++ + N + N NDP+ Q + E P +DP+ + + + + Sbjct: 42 AARRLFAMRVPMPFINKMEKGNANDPLFLQVMTDAAEFLQTPGFVKDPLQEQ-DNAIPNL 100 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +H+Y +R+LL + C V CR+CFRR + L YI + S+I EVIF Sbjct: 101 LHKYHNRVLLMVKGGCAVNCRYCFRRHFPYEANPG--NKASWRKTLDYIAQHSEIEEVIF 158 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL+ + L +L+ L I H++ +R HSR+P+V PQRI PEL + L ++ + Sbjct: 159 SGGDPLMAKDRELAWLLEQLNQIPHLKTVRIHSRLPVVIPQRITPELCRSLADSPLNKVL 218 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 +H NH E E + L AG+ LL+QSVLLKGINDD IL L I PY Sbjct: 219 VLHINHANEIDELLSRQLQPLKQAGVTLLNQSVLLKGINDDAHILKALNDKLFATGILPY 278 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 YLH D G SHF + E I L SG P ++ G K Sbjct: 279 YLHLLDKVEGASHFWIDDERALAIYRQLITLSSGYLVPKLAREIAGEKSKTWYS 332 >gi|294495163|ref|YP_003541656.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219] gi|292666162|gb|ADE36011.1| L-lysine 2,3-aminomutase [Methanohalophilus mahii DSM 5219] Length = 358 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 101/354 (28%), Positives = 191/354 (53%), Gaps = 14/354 (3%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q+ ++ + S + L + + + + IK + H TP A+L++ +P PI +Q + Sbjct: 8 QITNQ-INSLEKLEEIINLTESEREAIKTLDTH--WGTTPYFASLMDKDDPECPIRKQVV 64 Query: 62 PQKEELNILPEEREDPIGDNNHS----PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 P +E + ++ + N + I +Y DR+ + C +YCR CFR+E+ Sbjct: 65 PSLQESHNKYGMKDYLVWKENRATEEVRPDSIARQYKDRVAFTVFQECGIYCRHCFRKEL 124 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 V S + + + + +I++ ++ +V+ TGGDPL+LS ++++ ++++LR I HV++ Sbjct: 125 VVSHDLKL--DFNVDDGIEWIRQHPEVRDVLITGGDPLLLSDEKIEYIIESLRDIPHVEM 182 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 +R SR+PIV P RI L + L P+++ NHP E +++ A+ L +AG+ Sbjct: 183 IRIGSRLPIVLPHRITDNLKRILGGYHDVPIWLNTQCNHPKEITDKTKRAVYDLVSAGVN 242 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA- 295 + +Q+VLLKGINDD + + +L + + RI+PYYL + + A G HFR +E+G +++ Sbjct: 243 VGNQAVLLKGINDDVQTIRDLHQKLLTARIRPYYLFYCEPAPGIDHFRTPVEKGAELIRD 302 Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYP 348 L+ +GL QP Y+ + GK+ + + + Y + +H + + P Sbjct: 303 GLRGHTTGLAQPMYV--IATNVGKIPLMPDYYMVDKDEEKYVLRNHRGELTEIP 354 >gi|239827150|ref|YP_002949774.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70] gi|239807443|gb|ACS24508.1| lysine 2,3-aminomutase YodO family protein [Geobacillus sp. WCH70] Length = 379 Score = 372 bits (956), Expect = e-101, Method: Composition-based stats. Identities = 119/343 (34%), Positives = 187/343 (54%), Gaps = 18/343 (5%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 + K +T+ + + I KE+ +++KEI+N + + NLIN +PNDPI + IP Sbjct: 4 QPKYITNIEKITQ---IPKEEREKLKEITNKFVFRVNDYYLNLINWDDPNDPIRKLVIPN 60 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 + ELN D + + + G H+Y LL + VC YCRFCFR+ + + Sbjct: 61 EGELNE--YGSWDASDEAANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRNDVK 118 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 +S D + YI + +I V+ TGGD LIL+ K+++ +++ LR I HV+I+RF S+ Sbjct: 119 EAMS--DVTPGIEYIAQTPEINNVLLTGGDSLILATKKIRYIVERLRAIDHVKIIRFGSK 176 Query: 184 VPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 +P+ +P RI + EL+ ++ K +Y+ H NHP E +EEA A L +AG+I++ Sbjct: 177 LPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEARKAFQALHDAGVIVV 236 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+ +LKGINDDPE+LA L+ + PYY AG S F LT+EE KIV K Sbjct: 237 NQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDFVLTLEEVYKIVEQAK 296 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 + SGL + ++ + GK++I + NG + H Sbjct: 297 ARTSGLGKRVRLV-MSHSSGKIEI-----LAIENGKAYLKYHQ 333 >gi|120555694|ref|YP_960045.1| lysine 2,3-aminomutase YodO family protein [Marinobacter aquaeolei VT8] gi|120325543|gb|ABM19858.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8] Length = 355 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 102/324 (31%), Positives = 161/324 (49%), Gaps = 3/324 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNPNDPIARQF 60 Q+ +++T+ + L + E + + I + I NP+DP+ RQ Sbjct: 32 QILSQSVTTPEQLLERLGLAPEDWFRGAACGHRLFPIRVPEPYLARIEQGNPDDPLLRQV 91 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E I P+ DP+ + + G++ +Y R LL + C + CR+CFRR Sbjct: 92 LPVAQEAEIHPDFVSDPLEEASAIQTTGLIRKYTSRALLMITGQCAINCRYCFRRHFPYG 151 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 L +D + + +I EVIF+GGDPL ++ + L + + L I H++ LR Sbjct: 152 DH--RLGPEDRRQVIDSLSASPEINEVIFSGGDPLAVNDRLLSQWAELLGDIPHLRRLRI 209 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 HSR+P+V PQR+ LI L + +H NHP E + A RL+ AG+ LL+Q Sbjct: 210 HSRLPVVIPQRVCDSLIDWLSRTRLQKVLVVHVNHPAEIDQATRQAFRRLSEAGVTLLNQ 269 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SV+LKG+ND L+ L T E + PYYLH D +G HF ++ + +IV + E Sbjct: 270 SVILKGVNDSSATLSALSETLFEAGVMPYYLHAFDPVSGARHFSVSDTDAIRIVNEMLEN 329 Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324 + G P + +LPG K +D Sbjct: 330 LPGFLVPKLVRELPGRASKTPLDL 353 >gi|113461431|ref|YP_719500.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT] gi|112823474|gb|ABI25563.1| L-lysine 2,3-aminomutase [Haemophilus somnus 129PT] Length = 337 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 102/315 (32%), Positives = 154/315 (48%), Gaps = 3/315 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K ++ +L N + E + + + + NPNDP+ Q + + Sbjct: 22 KAISDPIELLNYLELPIESFQYDIAARQLFPLRVPFPFVKKMEKGNPNDPLFLQVMASQH 81 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E + +DP+ + H+ + I+H+Y +R+LL + + C V CR+CFRR ++ Sbjct: 82 EFLPMAGFTKDPL-EEQHNSVPNILHKYHNRLLLIVKNSCAVNCRYCFRRHFPYAENKG- 139 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + + +L YI ++I EVIF+GGDPL+ L ++K L I H+ LR H+R+P Sbjct: 140 -NKQSWVKSLDYIAAHAEIEEVIFSGGDPLMAKDHELAWLIKELENIPHLHTLRIHTRLP 198 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V PQRI EL + L E+ I H NHP E E A+ +L +A + LL+QSV+LK Sbjct: 199 VVIPQRITDELCRILSESRFQKVIVTHINHPNEIDEILACAMKKLKHANVTLLNQSVVLK 258 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 IND+ IL L + I PYYLH D G SHF L E I L+ SG Sbjct: 259 NINDNAHILKKLSDKLFSIGILPYYLHLLDKVEGASHFYLDDESAAAIYKELQRISSGYL 318 Query: 306 QPFYILDLPGGYGKV 320 P ++ K Sbjct: 319 VPKLAREIAHELNKT 333 >gi|225175029|ref|ZP_03729026.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter alkaliphilus AHT 1] gi|225169669|gb|EEG78466.1| lysine 2,3-aminomutase YodO family protein [Dethiobacter alkaliphilus AHT 1] Length = 371 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 109/355 (30%), Positives = 185/355 (52%), Gaps = 14/355 (3%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q++++ + + + L + +E+ D I+ TP +L++ NP PI RQ Sbjct: 6 WQMQNQ-VNTLEKLEEYIKVTEEEADAIRNCET--RWGTTPYFVSLMDKENPECPIRRQV 62 Query: 61 IPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116 IP K E I DN+ I +Y DRI + + + C +YCR CFR+E Sbjct: 63 IPSKHENVNEFGIENYLVYKENRDNHEQRPDTIARQYKDRIAMTITNHCGIYCRHCFRKE 122 Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 +V + + D + L ++++ ++ EV+ TGGDP +L +++ +++ LR + H++ Sbjct: 123 LVVDKSMQL--RFDVDEGLEWVRQHPELREVLITGGDPFLLPDDQIEYIIRKLREVPHIE 180 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI 235 ++RF SR+PIV PQRI P L + L + K P+++ NH E +E AI L G+ Sbjct: 181 MIRFGSRLPIVLPQRITPGLKKVLGQYHKVPIWVNTQCNHAKEITERTAQAIWDLLTCGV 240 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 + +Q+VL+KGINDD L + + +RI+PYY+ + + A G HFR +E+G +++ Sbjct: 241 NVGNQAVLMKGINDDEHSFQQLHQKLLSIRIRPYYVFYLEPAPGIDHFRTPVEKGAELIR 300 Query: 296 S-LKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYP 348 L+ SGL QP Y+ + GKV + + IK+ Y + +H P Sbjct: 301 DTLRGHTSGLAQPMYV--IATNIGKVPLMPDYYIKEKNEKEYILQNHRGETTTLP 353 >gi|21231711|ref|NP_637628.1| hypothetical protein XCC2273 [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768163|ref|YP_242925.1| hypothetical protein XC_1842 [Xanthomonas campestris pv. campestris str. 8004] gi|188991300|ref|YP_001903310.1| Putative radical SAM superfamily protein [Xanthomonas campestris pv. campestris str. B100] gi|21113412|gb|AAM41552.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573495|gb|AAY48905.1| conserved hypothetical protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733060|emb|CAP51258.1| Putative radical SAM superfamily protein [Xanthomonas campestris pv. campestris] Length = 342 Score = 372 bits (955), Expect = e-101, Method: Composition-based stats. Identities = 100/321 (31%), Positives = 163/321 (50%), Gaps = 2/321 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + + ++L + + ++ + +++ + + P + DP+ RQ + Sbjct: 24 QLWRQAVRDPRELLALLGLDAQAAGISEDAAAQFAVRVPRSFVARMRPGDLTDPLLRQVL 83 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E+ ++P D +GD G++ +Y R LL C V+CR+CFRR ++ Sbjct: 84 PLDAEMRVVPGFALDAVGDGAARTTTGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAE 143 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR H Sbjct: 144 E--TAARDGWREAVAAIAADPDIDEVLLSGGDPLSLTTPKLAELTDALAAIPHLKRLRIH 201 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P+R++ L+ L+ PV IHANH EF E AA+ L AG LL+Q+ Sbjct: 202 SRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFDAEVDAALHALRGAGAQLLNQA 261 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+ND + LA L + PYYLH D AG +HF + + + A L ++ Sbjct: 262 VLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELATRL 321 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 SG P + ++PG GK + Sbjct: 322 SGYLVPRLVREIPGDTGKRPL 342 >gi|261868588|ref|YP_003256510.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D11S-1] gi|261413920|gb|ACX83291.1| DNA repair protein RecO [Aggregatibacter actinomycetemcomitans D11S-1] Length = 343 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 3/314 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 ++ + L + E + E +++ + + N DP+ Q + +E Sbjct: 28 ISDPKILLQHLELPLEPFKQDIEARKLFAMRVPLPFVAKMEKGNARDPLFLQVMSFADEF 87 Query: 68 NILPEEREDPIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 +DP+ + + + I+H+Y +R+L + C V CR+CFRR Q Sbjct: 88 LQAEGFSKDPLEEQEDKNVVPNILHKYHNRLLFMVKGGCAVNCRYCFRRHFPYDQNKG-- 145 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ + AL YI +I EVI +GGDPL+ + ++K L + H+ LR HSR+P+ Sbjct: 146 NKQNWQKALDYIATHPEIEEVILSGGDPLMAKDHEIAWLIKHLENLPHLTRLRIHSRLPV 205 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQRI + L + + H NH E E+ A+ +L N G++LL+QSVLLK Sbjct: 206 VIPQRITDKFCHILTQTRLQKILVTHVNHANEIDEDFSHAMDKLKNCGVVLLNQSVLLKN 265 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD IL L + I PYYLH D G +HF L + +I L+ SG Sbjct: 266 VNDDAHILKVLSDRLFSVGILPYYLHLLDKVEGAAHFYLDDAQALRIYKQLQRITSGYLV 325 Query: 307 PFYILDLPGGYGKV 320 P ++ G K Sbjct: 326 PKLAREIGGEPNKT 339 >gi|95930510|ref|ZP_01313245.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] gi|95133345|gb|EAT15009.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] Length = 365 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 105/357 (29%), Positives = 179/357 (50%), Gaps = 16/357 (4%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + + L + ++ +++ TP A+L++ +P PI +Q Sbjct: 12 WQQQLANFVNTIERLEQYVNLTDDERQILEQNKTT--WGTTPYFASLMDADDPQCPIRKQ 69 Query: 60 FIPQKEELNILPEEREDPIG-----DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 IP E +D + D I +Y DR+ + C +YCR CFR Sbjct: 70 VIPSSLEQQNT-YGMDDYLMWKENRDTEEQRPDSIARQYKDRVAFTVTQTCGIYCRHCFR 128 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 +E+V T + + L +I + ++ +V+ TGGDPL+L +++ +++ LR I H Sbjct: 129 KELVVDGDLTF--DFNVDDGLEWISQHPEVRDVLITGGDPLLLPDEKIAYLIERLRAIPH 186 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 +Q++RF SRVPIV PQRI PEL L P+++ NHP E +E A+ L Sbjct: 187 IQMIRFGSRVPIVLPQRITPELKNILGGNHKVPIWLNTQCNHPKELTEHTAQAVYDLMTC 246 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 G+ + +Q+VLLKGINDD E L + + +RI+PYY+ + + A G HFR +E+G ++ Sbjct: 247 GVNVGNQAVLLKGINDDVETFRELHQKLLRVRIRPYYVFYCEAAPGIDHFRTPVEKGAEL 306 Query: 294 VA-SLKEKISGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDHHNIVHDYP 348 + +L+ +GL QP Y++ GK+ + + I + Y + +H + P Sbjct: 307 IRDALRGHTTGLAQPMYVV--ATNIGKIPLMPDYYIVDKDDEQYTLRNHKGQITHLP 361 >gi|307824010|ref|ZP_07654237.1| lysine 2,3-aminomutase YodO family protein [Methylobacter tundripaludum SV96] gi|307734794|gb|EFO05644.1| lysine 2,3-aminomutase YodO family protein [Methylobacter tundripaludum SV96] Length = 336 Score = 371 bits (954), Expect = e-101, Method: Composition-based stats. Identities = 112/323 (34%), Positives = 172/323 (53%), Gaps = 3/323 (0%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + +DL + + + + ++ + + A + NP+DP+ RQ Sbjct: 15 WQQQLAEAFNNIEDLCRYLHLSPDDLPVSDIAAENFPLRVPLSFAACMEKGNPHDPLLRQ 74 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P KEEL P DP+GD + G++H+Y R+L C + CR+CFRR Sbjct: 75 VLPIKEELFAYPGFSNDPVGDLAAATQVGVLHKYHGRVLFINTGSCAINCRYCFRRNFPY 134 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + LS + +AA+ IQ+ I EVI +GGDPL+LS RL ++++ L IKH++ +R Sbjct: 135 A--DLQLSKQKEDAAIQAIQDDPSISEVILSGGDPLLLSDSRLTRLIRQLDGIKHLKRIR 192 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+PIV P RI E I L ++ K + I +H NH E S+ IAA + L N+GI L + Sbjct: 193 IHSRLPIVLPARITDEFINTLTQSPKQIIIIVHCNHANEISDRVIAACASLKNSGITLFN 252 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+G+ND+ E+L L I PYYLH D A GT HF ++ E ++ ++ Sbjct: 253 QSVLLRGVNDNAEVLGELSEQLFSHGITPYYLHLLDKATGTGHFEVSEAEALALMHQVQA 312 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 + G P + + G K I Sbjct: 313 ALPGYLVPKLVKEQAGATSKQTI 335 >gi|221133998|ref|ZP_03560303.1| lysine 2;3-aminomutase [Glaciecola sp. HTCC2999] Length = 351 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 162/319 (50%), Gaps = 6/319 (1%) Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69 S L N E + + +++ + +L+ ++ +DP+ +Q +P +E + Sbjct: 30 SPDSLLNYLGFNASDFAEDHKARSLFALRVPRFFVDLMARNDLDDPLLKQVMPVADEFIV 89 Query: 70 LPEEREDPI----GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 PE DP+ + ++ KG++H+Y +R+LL L C V CR+CFRR Q Sbjct: 90 DPEFSLDPLKEQVNETTNTSTKGMLHKYQNRVLLMLRGGCAVNCRYCFRRHFPYDQHHN- 148 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + +D +I+ +I EVI +GGDPL+ + + + L I ++ +R H+R+P Sbjct: 149 -NKQDWLDVFEHIKTDPKIDEVILSGGDPLMANDDYMAWICAQLETIPSIKRIRLHTRLP 207 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P R+ PEL+ L ++ K + +H NHP E S E I ++ L AG+ +L+Q+VLLK Sbjct: 208 VVLPYRVTPELLIALAQSSKQTIMVLHINHPKEISSELIQKVALLHEAGVTVLNQAVLLK 267 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GIND L RI+PYYLH D G +HF ++ + I+ + K SG Sbjct: 268 GINDSAHTQIALNEALFSARIQPYYLHMFDKVQGAAHFAISDKRAVNIMREVLTKQSGYM 327 Query: 306 QPFYILDLPGGYGKVKIDT 324 P + ++ G K +D Sbjct: 328 VPKLVREIGGESSKTPVDL 346 >gi|32471298|ref|NP_864291.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1] gi|32443139|emb|CAD71970.1| L-lysine 2,3-aminomutase [Rhodopirellula baltica SH 1] Length = 381 Score = 371 bits (953), Expect = e-100, Method: Composition-based stats. Identities = 104/319 (32%), Positives = 177/319 (55%), Gaps = 4/319 (1%) Query: 6 KTLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 + + SA +L + + + + + + + A + P +PNDP+ RQ +P Sbjct: 65 RAIRSAGELRRHLNLDLSAGESNGTNAEDHGFPVFVPLEFAARMKPGDPNDPLLRQVLPL 124 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 EE N DP+GD + + G++H+Y R L C ++CR+CFRRE S+ Sbjct: 125 PEEANSPDGFSSDPVGDLHAAVAPGLLHKYHGRALAITTGACGIHCRYCFRREFPYSENS 184 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 + E AL Y++E I EV+ +GGDPL L+ + K+++ + I HV+ LR+H+R Sbjct: 185 SR--GDHLELALKYLRENDSIEEVLLSGGDPLTLTDDSVAKLMQQIESIPHVRRLRWHTR 242 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 +PIV P R+ I ++ + ++ +H NHP E E AA+ RL +AG+ +L+Q+VL Sbjct: 243 MPIVIPSRVTDAWIVRMQASRLTSWVVVHCNHPAELDSETGAALMRLVDAGVPVLNQAVL 302 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+NDD ++L +L R ++LR+ PYYLH D G +HF + E G+ +V+ L+ ++ G Sbjct: 303 LRGVNDDVDVLESLCRRLIDLRVMPYYLHQLDRVRGAAHFEVDQECGRALVSQLESRLPG 362 Query: 304 LCQPFYILDLPGGYGKVKI 322 P ++ + G K ++ Sbjct: 363 FAVPRFVCEQAGQASKTRL 381 >gi|326794182|ref|YP_004312002.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea MMB-1] gi|326544946|gb|ADZ90166.1| lysine-2,3-aminomutase-related protein [Marinomonas mediterranea MMB-1] Length = 336 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 96/320 (30%), Positives = 165/320 (51%), Gaps = 2/320 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + +T +L + + + + + + + I N NDP+ Q +PQ + Sbjct: 19 RAITQLPELLKELDLPADLAATHIGATKTFRLLVPRPYLSRIEKGNLNDPLLLQVLPQHQ 78 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL + +DP+ + NH+P K +VH+Y R+L+ +C V CR+CFRR Sbjct: 79 ELADVEGYLKDPLQEANHTPQKALVHKYESRVLVITTGICAVNCRYCFRRHFPYGDNQ-- 136 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L+ + ++ + Y+ I EVI +GGDPL+L K L + +++L I H++ LR H+R+P Sbjct: 137 LAQSEWQSVIDYVTNDKNINEVILSGGDPLMLKDKVLAERVRSLESIAHLKRLRIHTRLP 196 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P RI+ ELI + ++ + + H NH E + +A+ RL G+ LL+Q VLLK Sbjct: 197 VVIPSRIDDELIYWMSQSRLSIVLVTHINHANEIDQAVESAMLRLKQIGVTLLNQGVLLK 256 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 +ND E +L ++ + PYY+ D AG +HF + IE+ Q+++ + +K+ G Sbjct: 257 NVNDSVEAQVDLSNRLFQVGLLPYYMFTFDPVAGAAHFDIPIEDAQRLMGEVTKKLPGYL 316 Query: 306 QPFYILDLPGGYGKVKIDTH 325 P ++PG K Sbjct: 317 VPKLAKEIPGRASKTVFAPQ 336 >gi|325107258|ref|YP_004268326.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305] gi|324967526|gb|ADY58304.1| L-lysine 2,3-aminomutase [Planctomyces brasiliensis DSM 5305] Length = 346 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 97/323 (30%), Positives = 169/323 (52%), Gaps = 3/323 (0%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + +L + + + + SN + + + N + P P+DP+ RQ Sbjct: 26 WQQQLSRAIRDPAELLERLQLPADLLPAARSASNDFPLLVPESFLNRMQPGEPDDPLLRQ 85 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P ++EL D +GD+ G++ +Y R L+ L C V+CR+CFRR Sbjct: 86 ILPVEQELQPKQGFTTDAVGDDAARIAPGLLQKYHGRALMITLGTCAVHCRYCFRRHYPY 145 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 S + + L I ++ + E++ +GGDPL+L+ +RL +++ L I H+Q LR Sbjct: 146 --HDEPRSREQWQETLNVIADRPDLEEILLSGGDPLVLNDRRLGELIDDLAKIPHLQRLR 203 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P R+ + + L++ + +HANHP E + A++ RL+ AG +L+ Sbjct: 204 IHTRLPIVLPDRVTEQFLSLLQDTRLQPVVVVHANHPAEVVADCAASLKRLSRAGFPVLN 263 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+G+ND + A L R + + PYYLH D G +HF G+ IV +LKE Sbjct: 264 QAVLLRGVNDTVDTQAELCRRLINAGVLPYYLHQLDRIQGAAHFETDAALGKAIVQALKE 323 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++ G P ++ ++ G K ++ Sbjct: 324 RLPGYAVPRFVREIAGEPSKTEM 346 >gi|90020728|ref|YP_526555.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40] gi|89950328|gb|ABD80343.1| L-lysine 2,3-aminomutase [Saccharophagus degradans 2-40] Length = 346 Score = 370 bits (950), Expect = e-100, Method: Composition-based stats. Identities = 98/332 (29%), Positives = 158/332 (47%), Gaps = 16/332 (4%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQID----------EIKEISNHYSIALTPVIANLINPH 50 Q +++ ++L + E ++ ++ + + + +T A+ I P Sbjct: 9 WQ----SISWQEELSSLITDPAELLERLELPESLLESAQKANKLFPLRVTQSYASRIKPG 64 Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + +DP+ RQ +P EL DP+ + + +P G++H+Y R+LL C + CR Sbjct: 65 DVDDPLLRQVLPLGAELTSPASYTADPLAEQSFNPAPGVIHKYHGRVLLISASQCAINCR 124 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFRR + S + + AL YI + I EVI +GGDPL +S +++Q ++ + Sbjct: 125 YCFRRHF--DYQTNTPSRAEWQEALRYIADNESIDEVILSGGDPLAVSDRQMQWLVNQIA 182 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I HV LR H+R+P+V P RI EL+ L + I +H NH E E + L Sbjct: 183 VIPHVTRLRIHTRLPVVLPNRITSELVDTLVKTRLQCVIVVHINHAAEIDEHVHNRLKIL 242 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 A I LL+QSVLLKG+ND L +L + I PYYLH D G +HF + Sbjct: 243 KKANITLLNQSVLLKGVNDSASCLVSLSKRLFSCGILPYYLHLLDKVTGAAHFDVDEASA 302 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + L + G P + ++P K + Sbjct: 303 IALHNHLLATLPGYLVPKLVREVPNAASKTAV 334 >gi|325294734|ref|YP_004281248.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065182|gb|ADY73189.1| lysine 2,3-aminomutase YodO family protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 351 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 113/340 (33%), Positives = 180/340 (52%), Gaps = 7/340 (2%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + + + + + E+ + K++++ Y TP +L I R P E+ Sbjct: 12 VRNIESIEKFFPLTDEEKESFKKVTSIYPFLSTPYYLSLAVKS---CAIKRMIFPNIMEI 68 Query: 68 N--ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 + I + EDP+ + + HRYPDR+L+ + CP CRFC R+ +K Sbjct: 69 SEAIQSKGEEDPLSEERDKKTLHLTHRYPDRVLVVTTNFCPTLCRFCMRKRNW-KKKTFF 127 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 +S + E AL YI++ I +V+ +GGDPL L +RL+K+L L+ I HV+++R +R P Sbjct: 128 ISDTEIENALNYIRKNENIRDVLISGGDPLFLPIERLKKLLFGLKAIDHVEVVRVGTRAP 187 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + P R+ + + + E + V++ H NHP E +E + A+ L AGI + +Q+VLLK Sbjct: 188 VTLPHRLLDDDLLEVLEKAEKVWVNTHFNHPDEITELSKEAVKNLLKAGIPVNNQTVLLK 247 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GIND +IL L R +++++PYYL H D G HF +I +G KI+ L ++IS Sbjct: 248 GINDSADILEKLFRNLQKIKVRPYYLFHCDPVKGVMHFSTSITKGIKILEKLFKRISPFA 307 Query: 306 QPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH 345 P+Y +D PGG GKV+I KK GN Y + Sbjct: 308 IPYYAVDGPGGKGKVQILPDRYKKEGN-FYIFRSFNGETF 346 >gi|292490713|ref|YP_003526152.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus halophilus Nc4] gi|291579308|gb|ADE13765.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus halophilus Nc4] Length = 336 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 97/323 (30%), Positives = 158/323 (48%), Gaps = 3/323 (0%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + Q+L + + + + + + +PNDP+ RQ Sbjct: 14 WQTELARAVRNPQELLALIGLNHHPQLAGEATRRQFPLRVPRGYIARMKKGDPNDPLFRQ 73 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 P E I P DP+GD P G++ +Y R+LL C ++CR+CFRR Sbjct: 74 VFPLIAEDQISPGFSADPVGDLAAMPAPGVLQKYAGRVLLVTTGACAIHCRYCFRRHFPY 133 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + + AL YI + EVI +GGDPL L+ RL ++++ L I HV+ LR Sbjct: 134 ADH--NPAPSQWQQALQYIAQNPSTQEVILSGGDPLTLTDNRLTELVQALAAISHVKRLR 191 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P+R++ L+Q L+ + IHANH E + A+ L+ AG L + Sbjct: 192 IHTRLPVVLPERVDSHLLQWLEHTSLQKVVVIHANHANELDDRVGEALEGLSRAGCRLFN 251 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+GIND L +L + + + PYYLH D G +HF + Q + +L+ Sbjct: 252 QTVLLRGINDRVSALCDLSESLFDAGVIPYYLHLLDRVQGAAHFEVDTPTAQCLHRTLRA 311 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++ G P + +L G K+ + Sbjct: 312 RLPGYLVPLLVQELAGAPSKLPL 334 >gi|152979756|ref|YP_001345385.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus succinogenes 130Z] gi|150841479|gb|ABR75450.1| lysine 2,3-aminomutase YodO family protein [Actinobacillus succinogenes 130Z] Length = 340 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 97/314 (30%), Positives = 149/314 (47%), Gaps = 3/314 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++ +L + + + + + + NP DP+ Q + +E Sbjct: 26 AVSDPVELLKMLNLSAQFSKRDFAARKLFPLRVPIPFITKMEKGNPQDPLLLQVMLSHQE 85 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 +DP+ + P I+H+Y +R+L + + C V CR+CFRR +Q Sbjct: 86 FLYAEGFNKDPL-EEQKMPAPNILHKYHNRLLFMVKNACAVNCRYCFRRHFPYNQSQG-- 142 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + A+ YI E QI EVIF+GGDPL+ L ++K L I H+Q LR HSR+P+ Sbjct: 143 NKANWRQAIEYIAENPQIEEVIFSGGDPLMAKDHELDWLIKQLETIPHLQRLRIHSRLPV 202 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 + PQRI L + L+ + + H NHP E + A+ RL A + LL+QSVLLK Sbjct: 203 MIPQRITSALCRMLQNSRLKAVLVTHINHPNEIDDVLAQAMVRLKQARVELLNQSVLLKN 262 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ +L L E+ I PYYLH D G +HF ++ E KI L+ SG Sbjct: 263 VNDNAAVLKTLSDNLFEIGILPYYLHLLDKVEGAAHFYVSDESAVKIYRDLQATTSGYLV 322 Query: 307 PFYILDLPGGYGKV 320 P ++ K Sbjct: 323 PKLAREIANEPNKT 336 >gi|257455683|ref|ZP_05620912.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60] gi|257446966|gb|EEV21980.1| L-lysine 2,3-aminomutase [Enhydrobacter aerosaccus SK60] Length = 333 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 104/327 (31%), Positives = 168/327 (51%), Gaps = 6/327 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q T+TS +L A + ID + + + + + NDP+ +Q Sbjct: 11 WQNAFSDTITSFAELGQALDLP---IDSFDSQVGQFPLKVPRRFVQKMGKGDINDPLLKQ 67 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P +E + DP+ + + +P+KGI+H+Y R+L+ + C V CR+CFR+ Sbjct: 68 VLPTFQETVQVTGFVTDPLDEQHANPVKGIIHKYASRVLIPVTGACVVNCRYCFRQHF-- 125 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + D +A AYI + EVI +GGDPL LS++RL ++ TL + V +R Sbjct: 126 DYHENLPTHNDWQAISAYITAHPAVNEVILSGGDPLSLSNRRLLEIFTTLEALPQVHTIR 185 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+RVP++ P+R++ L+ + + + IHANHP E +E + + AG+ LL+ Sbjct: 186 IHTRVPVMIPERLDEPLLARFANSRCHIVMVIHANHPNEIDQETQIFLGKAKKAGVTLLN 245 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLK INDD LA+L + + PYYLH D AG SHF ++ E+ + L Sbjct: 246 QTVLLKSINDDANTLASLNEKLWQAGVLPYYLHVLDKVAGASHFYISDEQAVALYWELLA 305 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326 K +G P + +LP K +D +N Sbjct: 306 KCAGYLVPKLVRELPNKPFKTPVDLYN 332 >gi|194366516|ref|YP_002029126.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas maltophilia R551-3] gi|194349320|gb|ACF52443.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas maltophilia R551-3] Length = 346 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 99/321 (30%), Positives = 156/321 (48%), Gaps = 2/321 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + L L + + + +++ + + + DP+ RQ + Sbjct: 28 QLWRQALRDPHALLARLQLDPAALGVSDQAMAQFALRVPEGFVARMRKGDAADPLLRQVL 87 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE+ P D +GD G++ +Y R LL C + CR+CFRR Sbjct: 88 PIDEEMRPAPGFSFDAVGDGAAKKATGVIQKYRGRALLVATGSCAINCRYCFRRHF--DY 145 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + A+A I I EVI +GGDPL L+ +L ++ LR I H++ LR H Sbjct: 146 GAENAAKGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLAELTDALRQIPHIRRLRIH 205 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +R+PIV P+R++ EL+ L P+ I +HANH EF AA++RL G LL+Q+ Sbjct: 206 TRLPIVLPERVDEELLAWLGGLPWPLAIVVHANHANEFDASVDAAMARLRGTGAQLLNQA 265 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+ND + L +L + PYYLH D G +HF + + + ++A L ++ Sbjct: 266 VLLRGVNDSVQALQDLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDTQAKALIAGLTARL 325 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 SG P + +LPG K + Sbjct: 326 SGYLIPKLVRELPGDPSKRPL 346 >gi|308048213|ref|YP_003911779.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799] gi|307630403|gb|ADN74705.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799] Length = 340 Score = 369 bits (949), Expect = e-100, Method: Composition-based stats. Identities = 97/325 (29%), Positives = 164/325 (50%), Gaps = 4/325 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + S +L + + + E + + + A + P + DP+ RQ Sbjct: 16 WQRELAEAYRSPVELLTDLQLDPAEFGQGLEARRLFPMLVPKAFAAAMRPGDAQDPLLRQ 75 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P +E + DPIG+ P+ G++H+Y R+LL L C V CR+CFRR Sbjct: 76 VLPVGDEFLVADGFGPDPIGEQ-DGPMPGLLHKYQSRVLLMLRTGCAVNCRYCFRRHFPY 134 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + + + A YI ++I E++ +GGDPL+ L +++ + H++ LR Sbjct: 135 ADH--KVGAAELAQAHEYIASDTRINELLLSGGDPLMARDDHLAELVARFSDLPHLKRLR 192 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P RI +L+ L +A V + +H NHP E E +A ++RL AG+ LL+ Sbjct: 193 IHTRLPVVLPSRITDQLVSLLADAPWRVVMVLHINHPNELQPELVAGLARLKAAGVTLLN 252 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLKG+ND + L L + + PYYLH D AG +HF + + + ++A + Sbjct: 253 QAVLLKGVNDHADTLVALAEGLFDAGVLPYYLHLLDRVAGAAHFEVDEDRARALMAEQLQ 312 Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324 ++ G P + ++ G K ID Sbjct: 313 RLPGFLVPRLVREIAGEASKTPIDL 337 >gi|302340146|ref|YP_003805352.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae DSM 11293] gi|301637331|gb|ADK82758.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta smaragdinae DSM 11293] Length = 374 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 131/361 (36%), Positives = 193/361 (53%), Gaps = 16/361 (4%) Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLINPHNPNDPIA 57 Q L+ + +T+ +L ++ E+ E ALT +L+ +P P+ Sbjct: 14 WQRELKER-VTNLDELERHLCLEDEERAWFDSEEERRLPFALTRHYLSLM-GDDPASPLR 71 Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ IP+KEE + L E DP+ + +SPL ++HRY DR L C +YCR CFRR Sbjct: 72 RQAIPRKEEFHFLSYESADPLCEQEYSPLPRLIHRYEDRALFLASDRCALYCRHCFRRHF 131 Query: 118 VGS---QKGTVLSSKDT-------EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 G V + KD + A Y++++ +I E++ +GGDPL+L L +++ Sbjct: 132 TGGAGQGDREVKNRKDRRSLFEAAQDAACYLEKRPEIRELLLSGGDPLMLPDGTLFRLID 191 Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI 227 R + ILR +R+P V P RI P L + L P+++ NHP E S A+ A+ Sbjct: 192 LFRKHRPDLILRIGTRMPAVLPSRITPVLARELGR-RAPLFVVCQFNHPDEVSPPAVEAL 250 Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287 +RLA++GI +L+QSVLL+G+NDD E L L + R+ PYYL DLAAGTSH R I Sbjct: 251 ARLADSGIPILNQSVLLRGVNDDRETLKVLSGALLAARVIPYYLFQGDLAAGTSHLRAPI 310 Query: 288 EEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +G I+ SL++ +SGL P Y +DLPGG GKV I + +V + N + Y Sbjct: 311 LKGVSIMRSLRQCMSGLATPVYAVDLPGGGGKVSIPLDPVPRVEEREALLPGPDNRLWPY 370 Query: 348 P 348 P Sbjct: 371 P 371 >gi|152994930|ref|YP_001339765.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1] gi|150835854|gb|ABR69830.1| lysine 2,3-aminomutase YodO family protein [Marinomonas sp. MWYL1] Length = 340 Score = 369 bits (948), Expect = e-100, Method: Composition-based stats. Identities = 95/318 (29%), Positives = 164/318 (51%), Gaps = 2/318 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q + LTS +L + K + E ++ + + + I N +DP+ Q + Sbjct: 14 QHLSQALTSLPELIEHLGLPKNLAQQGIEAHQNFKLLVPRPYLSRIEYGNVHDPLLLQVL 73 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E+ + +DP+ + +H+P K IVH+Y R+L+ C V CR+CFRR + Sbjct: 74 PSLAEMQKVAGYTKDPLEEADHNPQKAIVHKYKRRLLVITTGTCAVNCRYCFRRHFPYAD 133 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 L+ + ++ + Y+++ +I EVI +GGDPL++ L ++ L + ++ LR H Sbjct: 134 NQ--LAQAEWQSVIDYLKDHPEINEVILSGGDPLMMKDSLLADKVRKLEALPQIKRLRIH 191 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P R+ ++++ +K + + + H NH E EE A +L +AG+ LL+Q Sbjct: 192 SRLPVVIPNRVCDDMLEWIKVSRLDIVMVWHINHANEMDEELANAAYKLKSAGVTLLNQG 251 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND E NL I PYY+ D G +HF + IE+ Q+++ + ++ Sbjct: 252 VLLKGVNDSVEAQVNLSEAVFSAGILPYYMFTLDPVEGAAHFDIAIEDAQELMGKVAAEL 311 Query: 302 SGLCQPFYILDLPGGYGK 319 G P ++PG K Sbjct: 312 PGYLVPRLAKEIPGKPAK 329 >gi|148269938|ref|YP_001244398.1| lysine 2,3-aminomutase YodO family protein [Thermotoga petrophila RKU-1] gi|147735482|gb|ABQ46822.1| L-lysine 2,3-aminomutase [Thermotoga petrophila RKU-1] Length = 365 Score = 368 bits (946), Expect = e-100, Method: Composition-based stats. Identities = 109/329 (33%), Positives = 183/329 (55%), Gaps = 19/329 (5%) Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 M++++ T +T + L E+ + +K I Y +LI+ +P+DPI + Sbjct: 1 MKVKYYTSITQVEQL------SPEERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKI 54 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ + Sbjct: 55 VVPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFI 112 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R Sbjct: 113 NVGAEVI--RDITPQLDYIRSHKEITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVQIIR 170 Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAG 234 S++P +P RI +PEL++ +++ K +Y+ NHP E +EEAI A++ L +AG Sbjct: 171 IGSKIPAFNPYRIIDDPELLRMIRKYSTKEKKIYVMTQFNHPKELTEEAIEAVNLLKDAG 230 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 +L +Q+ LL+GIND PE L L+ + + PYY+ +G F + IEEG +I Sbjct: 231 AVLCNQTPLLRGINDSPETLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIF 290 Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKI 322 ISG+ + Y+ + GK++I Sbjct: 291 TKAISNISGVAKRVRYV--MSHRTGKIEI 317 >gi|149910194|ref|ZP_01898840.1| hypothetical protein PE36_23316 [Moritella sp. PE36] gi|149806780|gb|EDM66744.1| hypothetical protein PE36_23316 [Moritella sp. PE36] Length = 337 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 93/317 (29%), Positives = 164/317 (51%), Gaps = 3/317 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++ + L + + + + + + + NP DP+ Q +P+++E Sbjct: 23 AISDPRKLLFILELPEVSFQSDFAARQLFPMRVPQSFVDRMEKGNPKDPLFLQVMPKQQE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 +DP+ ++ + + G++H+Y +R+L + C + CR+CFRR Sbjct: 83 FIQQAGFIKDPLDEHE-AVVPGLLHKYTNRVLFIVRGGCAINCRYCFRRHFPYQDNSN-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + A+ YI+ K +I EVIF+GGDPL+ + ++L ++ L I H++ LR H+R+P+ Sbjct: 140 NKHEWQQAIDYIRAKPEIIEVIFSGGDPLMANDEQLGWLVAQLEQIPHLKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P R+ EL+ LK++ + +H NHP E + E AA+++ AGI L +Q+VLL Sbjct: 200 VMPTRVTDELVTLLKQSSLRCSVVLHINHPNELAAELPAALAKFTTAGISLYNQAVLLAD 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND+ + L L + RI+PYYLH D G SHF + E+ I+ L ++ G Sbjct: 260 INDNADDLVELHERLFDNRIQPYYLHLLDKVEGASHFDVPEEKAVAIMNELLLRLPGFLV 319 Query: 307 PFYILDLPGGYGKVKID 323 P + ++ G K I Sbjct: 320 PKLVREIGGEKSKTPIS 336 >gi|15615505|ref|NP_243809.1| hypothetical protein BH2943 [Bacillus halodurans C-125] gi|10175565|dbj|BAB06662.1| BH2943 [Bacillus halodurans C-125] Length = 393 Score = 368 bits (945), Expect = e-100, Method: Composition-based stats. Identities = 113/349 (32%), Positives = 187/349 (53%), Gaps = 18/349 (5%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 + K + + + I KE+ +++K+I++ + + +LI+ ++PNDPI + IP Sbjct: 3 QPKYIMNVDKIEQ---IPKEEREKLKQITDKFVFRVNDYYLSLIDWNDPNDPIRKLVIPN 59 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 + EL+ R D ++ + + G H+Y LL VC YCR+CFR+ + + Sbjct: 60 EGELSE--YGRWDASDEDTNYVVPGCQHKYETTALLICSEVCGAYCRYCFRKRLFRNDVK 117 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 +S D + L YI + QI V+ TGGDPLIL+ K+L+ +++ LR I HV+I+R S+ Sbjct: 118 EAMS--DVDPGLDYIAQTPQINNVLLTGGDPLILATKKLRYIIERLRAIDHVKIIRIGSK 175 Query: 184 VPIVDPQRINPE--LIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 +P+ +P RI + L++ ++E +YI H NHP E + EA A L +AG I++ Sbjct: 176 LPVFNPMRITEDEQLLELIREYSTPDHRIYIMAHINHPVEITNEARQAFQALHDAGAIVV 235 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+ +LKGINDDP++LA L+ + PYY AG + F LT+EE IV K Sbjct: 236 NQTPVLKGINDDPDVLAELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEVYNIVEKAK 295 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 K SGL + L + GK+++ + +G + H + +Y Sbjct: 296 AKTSGLGKRVR-LSMSHTSGKIEV-----LAIEDGKAYLKYHQSRDGNY 338 >gi|238898952|ref|YP_002924634.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] gi|229466712|gb|ACQ68486.1| putative aminomutase [Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum)] Length = 345 Score = 367 bits (944), Expect = e-99, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 160/319 (50%), Gaps = 4/319 (1%) Query: 8 LTSAQDLYNANLIKKE-QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T L + + K ++ + + + + A + P +P DP+ Q + +E Sbjct: 23 ITDPLALLSFLKLDKNIKLRQGAYARALFPLRVPIAFAEKMTPGDPKDPLLLQVLTLSDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 DP+ + + L G++H+Y +R+L+ + C V+CR+CFRR Sbjct: 83 FVHTSGFSADPLCEQA-AVLPGLLHKYRNRVLMLIKGGCAVHCRYCFRRHFPYQNNKG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + E YI++ +++ EVIF+GGDPL+ L ++ L I H++ LR H+R+PI Sbjct: 140 SQVNREQVFNYIRKHTELDEVIFSGGDPLMAKDPELASLITVLESIPHIKRLRIHTRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L + + + + H NHP E + ++ RL AG+ LL+Q+VLLK Sbjct: 200 VIPSRITTRLCESFSNSSLQILMVTHINHPNEMDQAVYNSMYRLKQAGVTLLNQTVLLKD 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +N++ EILA L I PYYLH D G +HF + E ++I+ +L ++SG Sbjct: 260 VNNNAEILAQLSNRLFNAGILPYYLHLLDKVQGAAHFMVEEHEARQIMKALLGQVSGYLV 319 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++ G K+ ID Sbjct: 320 PRLTREVAGQPSKIPIDLQ 338 >gi|71278705|ref|YP_267720.1| hypothetical protein CPS_0971 [Colwellia psychrerythraea 34H] gi|71144445|gb|AAZ24918.1| conserved hypothetical protein TIGR00238 [Colwellia psychrerythraea 34H] Length = 342 Score = 367 bits (944), Expect = 1e-99, Method: Composition-based stats. Identities = 97/325 (29%), Positives = 165/325 (50%), Gaps = 4/325 (1%) Query: 1 MQLRHKTL-TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + T + L I + + + + + + + + +DP+ +Q Sbjct: 20 WQKDLRDVVTEPEKLLTLLNIAPDDYLQHFKARKLFPVRVPLSFIKRMKKGDFDDPLLKQ 79 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E + DP+ ++ + +G++H+Y R+L+ + C + CR+CFRR Sbjct: 80 VMPLSSEFLLSDGYTADPLNEH-DTVAEGLLHKYKSRVLMIVKTACAINCRYCFRRHFPY 138 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + K ++AL YI ++I EVIF+GGDPL+ + L +++ + I HV LR Sbjct: 139 --QDNSPNKKRWQSALDYIAAHNEISEVIFSGGDPLMANDDHLAWLIEQIEQIPHVSRLR 196 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+P+V P RI +L+ LK + + +H NHP E ++E I A+ L A I L + Sbjct: 197 IHSRLPVVIPNRITAKLVTLLKCSRLKATMVLHINHPNEINQELIEALEPLREARIPLFN 256 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+GINDD ++L NL + I+PYYLH D G +HF + + IV ++ Sbjct: 257 QSVLLRGINDDAQVLINLSEALFDAGIQPYYLHLFDAVQGAAHFDIAEADAVAIVKTMLA 316 Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324 + G P + ++ G K I+ Sbjct: 317 SLPGFLMPKLVREIAGQANKTPINL 341 >gi|77166085|ref|YP_344610.1| hypothetical protein Noc_2627 [Nitrosococcus oceani ATCC 19707] gi|254435948|ref|ZP_05049455.1| KamA family protein [Nitrosococcus oceani AFC27] gi|76884399|gb|ABA59080.1| L-lysine 2,3-aminomutase [Nitrosococcus oceani ATCC 19707] gi|207089059|gb|EDZ66331.1| KamA family protein [Nitrosococcus oceani AFC27] Length = 335 Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats. Identities = 100/322 (31%), Positives = 161/322 (50%), Gaps = 3/322 (0%) Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + Q+L + + + + + + +PNDP+ RQ Sbjct: 14 WQAALSQAVRNPQELLELTGLDNHPQIASEATRRQFPLRVPRSYIARMKKGDPNDPLFRQ 73 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 P E I P DP+GD P G++ +Y R+LL C ++CR+CFRR Sbjct: 74 VFPLHAEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCRYCFRRHFPY 133 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + + AL YI + I EVI +GGDPL L+ RL ++ +TL I HV+ LR Sbjct: 134 GDH--NPAQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLATISHVKRLR 191 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P+R++ L+Q L+ + IHANH E + AA++ L+ AG L + Sbjct: 192 IHTRLPVVLPERVDHHLLQWLEGTSLQKVVVIHANHVNELDDRVAAALNDLSRAGCRLFN 251 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+GIND L++L + + PYYLH D G +HF + I Q++ +L+ Sbjct: 252 QTVLLRGINDKVSALSDLSEGLFDTGVLPYYLHLLDKVQGAAHFEVDIITAQRLHRTLRA 311 Query: 300 KISGLCQPFYILDLPGGYGKVK 321 ++ G P + + G K+ Sbjct: 312 RLPGYLVPLLVQEQAGAPSKLP 333 >gi|93006773|ref|YP_581210.1| hypothetical protein Pcryo_1949 [Psychrobacter cryohalolentis K5] gi|92394451|gb|ABE75726.1| L-lysine 2,3-aminomutase [Psychrobacter cryohalolentis K5] Length = 335 Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats. Identities = 101/327 (30%), Positives = 168/327 (51%), Gaps = 5/327 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + +TS +L ++ + + + H+ + + + + +DP+ RQ Sbjct: 11 WQTQLSEAITSIDELLEILELQSLRSEVY--VPKHFELRVPRAFVAKMTVGDRDDPLLRQ 68 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P +E + DP+ +N H+P+KG++H+Y R+LL + C ++CR+CFR+ Sbjct: 69 VLPNHKEQMAVAGYVADPLAENAHNPVKGVLHKYQSRLLLTITGACAIHCRYCFRQHFDY 128 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 S S+K + + YI +I EVI +GGDPL ++++RL L TL I + +R Sbjct: 129 SANMPTASAK--QDIIDYISAHPEINEVILSGGDPLNVTNRRLFAWLDTLEAIGQLTTIR 186 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P R++ L++ L ++ + + IH NH E + R AGI LL+ Sbjct: 187 IHTRLPLVIPARLDDALLERLAQSRCQIVMVIHGNHANEIDALTAEYLQRARAAGITLLN 246 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLKGIND L + + PYYLH D AG +HF E ++ SL Sbjct: 247 QAVLLKGINDSVSAQTALSQRLFAAGVLPYYLHVLDKVAGAAHFDSDEEFAIELYWSLLA 306 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326 K+ G P + +LP KV I+ +N Sbjct: 307 KLPGYLVPKLVRELPNEPFKVPINVYN 333 >gi|285018690|ref|YP_003376401.1| lysine aminomutase [Xanthomonas albilineans GPE PC73] gi|283473908|emb|CBA16409.1| probable lysine aminomutase protein [Xanthomonas albilineans] Length = 315 Score = 366 bits (941), Expect = 2e-99, Method: Composition-based stats. Identities = 98/317 (30%), Positives = 161/317 (50%), Gaps = 2/317 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + +L + + + E + +++ + + +P+DP+ RQ +P EL Sbjct: 1 MRDPHELLALLGLDPQGLGISTEAATQFALRVPRGFVARMRHGDPHDPLLRQVLPLDAEL 60 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + +P D +GD G++H+Y R LL C V+CR+CFRR +++ + Sbjct: 61 HRVPGFALDAVGDGAAKKADGVIHKYRGRALLVATGSCAVHCRYCFRRHFPYAEE--SAA 118 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 A+A I I EVI +GGDPL L+ +L ++ + L + ++ LR HSR+P+V Sbjct: 119 RDGWRDAVAAIAADPSIEEVILSGGDPLSLATPKLVELTEALTALPQIKRLRLHSRLPVV 178 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P+RI+ L+ L+ P+ + IHANH EF AA++RL +AG LL+Q+VLL+G+ Sbjct: 179 LPERIDAPLLAWLRALPWPLAVVIHANHANEFDAAVDAALARLRDAGAQLLNQAVLLRGV 238 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND E LA L + PYYLH D G +HF + + +L ++SG P Sbjct: 239 NDTVEALAKLSERSFAAGVLPYYLHQLDRVEGVAHFEVDDATALDLHRALASRLSGYLVP 298 Query: 308 FYILDLPGGYGKVKIDT 324 + ++PG K + Sbjct: 299 KLVREIPGDSSKRPLMP 315 >gi|281355041|ref|ZP_06241535.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis ATCC BAA-548] gi|281317921|gb|EFB01941.1| lysine 2,3-aminomutase YodO family protein [Victivallis vadensis ATCC BAA-548] Length = 341 Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats. Identities = 108/306 (35%), Positives = 170/306 (55%), Gaps = 4/306 (1%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNILPEEREDPIGDN 81 E E++ + Y + L LI+P + NDPIARQ +P +EL L DP+ + Sbjct: 17 EITPEMERVEPTYPVYLNDYYLGLIDPADWRNDPIARQSLPDPQELADLSS-SYDPLAEE 75 Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQE 140 P ++HR+ DR++L C + CRFCFR+ + LS + A+ Y+ Sbjct: 76 EQMPTPHLIHRFVDRVVLLATGRCAMRCRFCFRKRAWTSGMELADLSDEQLAGAVGYLTA 135 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 + EV+ +GGDPL+L RL+ ++ + + +Q++R SR+P+V P+R+ E+ + Sbjct: 136 HPAVKEVLISGGDPLMLPFGRLKAIVDAVAAVPSIQVIRIGSRMPVVWPERVTAEIAEYF 195 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 ++ A H NHP E + EA AA RL AG+ +++QSVLLKG+NDD E+L L R Sbjct: 196 GSIP-GLWFATHFNHPREVTPEAAAACGRLVRAGVPVVNQSVLLKGVNDDAELLEELFRK 254 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 V +R+KP+YL H D G HF +E+G +I+ + + ++S L P + +DLP G GKV Sbjct: 255 LVAIRVKPHYLFHVDPVRGVRHFATGVEKGLQILRAFRPRLSSLAVPTFAIDLPEGGGKV 314 Query: 321 KIDTHN 326 + Sbjct: 315 ALQPEY 320 >gi|149196362|ref|ZP_01873417.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155] gi|149140623|gb|EDM29021.1| Lysine 2,3-aminomutase [Lentisphaera araneosa HTCC2155] Length = 341 Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats. Identities = 156/341 (45%), Positives = 222/341 (65%), Gaps = 8/341 (2%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTP-VIANLINPHNPNDPIARQFIPQKEE 66 + + + L LI + D + ++ + I+L+P VI N+ P I +Q++P KEE Sbjct: 4 IRNTKALQEQGLISADDTDLLNRVAEKFQISLSPEVIKNIAEPE-----IRQQYLPTKEE 58 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L I EE DPIGD +P+KGI HRYPDR+LLK LH C VYCRFCFRRE VG Q +L Sbjct: 59 LEIQEEELNDPIGDEKFTPVKGITHRYPDRVLLKPLHTCNVYCRFCFRREKVG-QADEIL 117 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + E AL YI+E+ ++WEVI TGGDPL LS +L +L L I HV+++R H+R+P+ Sbjct: 118 KQDELENALNYIRERQEVWEVILTGGDPLSLSADKLASILDQLEAIDHVKVIRIHTRIPL 177 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P++I+ EL++ L + K +Y+ +H N E S+ I +L+ AGI LLSQSVLLK Sbjct: 178 VAPEKISDELLKVL-DREKALYMILHCNSHKELSDNVCFGIKKLSRAGIPLLSQSVLLKN 236 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND E L L R+ V +R++PYYLHHPDLA GTSHFR+++E+G+++ + L++ +SG+ Q Sbjct: 237 INDSVEKLEKLFRSLVAIRVRPYYLHHPDLAQGTSHFRVSLEKGRQVTSELRKSLSGIAQ 296 Query: 307 PFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 P Y+LD+PGG GKV I+ + ++ I H+ DY Sbjct: 297 PLYVLDVPGGLGKVPAGKEFIQAKDDKTWKIQTIHDTFVDY 337 >gi|311695405|gb|ADP98278.1| lysine 2,3-aminomutase YodO family protein [marine bacterium HP15] Length = 346 Score = 364 bits (936), Expect = 8e-99, Method: Composition-based stats. Identities = 100/324 (30%), Positives = 162/324 (50%), Gaps = 3/324 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 QL +TS ++L + +E + ++ + I + N + NP DP+ RQ Sbjct: 23 QLLSGAVTSPKELLRRLELPEEPWLAGAEQGHRLFQIRVPEPFLNRMEKGNPADPLLRQV 82 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E P DP+ ++ G++ +Y R LL + C + CR+CFRR Sbjct: 83 LPLADEAGHAPGFVSDPLEESGAIATTGLIRKYRSRALLMVTGQCAINCRYCFRRHFPYD 142 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 ++ LS D + + + +I EVIF+GGDPL ++ + L + + I H++ LR Sbjct: 143 EQ--RLSPHDRQRVIDVLGASPEINEVIFSGGDPLAVNDRLLSQWASAISGIPHIRRLRL 200 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 H+R+P+V PQR+ EL++ L V I +H NHP E A+ L AG LL+Q Sbjct: 201 HTRLPVVIPQRVCDELLKWLSTTPLQVVIVLHINHPAEIDGPTRRALGYLRAAGATLLNQ 260 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SV+L+G+ND +L L T + + PYYLH D G HF ++ +E + +V L + Sbjct: 261 SVILRGVNDRTAVLEELSETLFDAGVLPYYLHAFDPVTGAHHFDVSDDEARNLVRELLAR 320 Query: 301 ISGLCQPFYILDLPGGYGKVKIDT 324 + G P + + PG K I+ Sbjct: 321 LPGFLVPKLVREEPGKESKTPINL 344 >gi|262376096|ref|ZP_06069327.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145] gi|262309190|gb|EEY90322.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter lwoffii SH145] Length = 340 Score = 364 bits (936), Expect = 1e-98, Method: Composition-based stats. Identities = 95/324 (29%), Positives = 161/324 (49%), Gaps = 4/324 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q + +T ++L + EQ+ S + + + + NP DP+ Sbjct: 11 WQSQLSDLITDPRELLEVLQLAPEQLLSGAILASEQFKLRVPRAFVGKMQVGNPLDPLLL 70 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q +P EL P DP+G+ + G++H+Y R LL L C V+CR+CFRR Sbjct: 71 QVLPHHLELEEHPGFVTDPLGEEQANQQPGVLHKYKSRFLLTLTGACAVHCRYCFRRHFP 130 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + ++D Y++ + I EVI +GGDPL LS+++L+ ++ L + H++ L Sbjct: 131 YQEN--LPKNEDWINIKQYLESQPDINEVILSGGDPLTLSNRKLKTWIERLESVPHLKFL 188 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R HSRVPIV P R++ EL+ LK + + + +H+NH E + +++L I +L Sbjct: 189 RIHSRVPIVIPNRVDEELLSMLKNSRLRIILVVHSNHASELDDFTCKRLNQLVQQQITVL 248 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLL G+ND ++L +L + + PYYLH D G HF L + +I + Sbjct: 249 NQAVLLNGVNDSAQVLVDLSYRLFDAGVMPYYLHVLDKVKGAHHFDLAPDHINEIYTEVL 308 Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322 + G P + ++ G K + Sbjct: 309 ANLPGYLVPKLVREIAGEKNKTPL 332 >gi|329894763|ref|ZP_08270564.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088] gi|328922752|gb|EGG30085.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC3088] Length = 335 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 103/323 (31%), Positives = 168/323 (52%), Gaps = 3/323 (0%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + +L A + + +D I + +++ + NP DP+ Q Sbjct: 14 WQSILQTAIRDSAELLQAVGVPQSSLDTITGETAGFAVLAPRPFVARMEYGNPKDPLLLQ 73 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + +EE+ DP+ + +P+ GI+H+Y R+LL C V CR+CFRR Sbjct: 74 VLALQEEIAPNAVGTTDPLEEQRFTPVPGIIHKYFGRVLLMTAGTCAVNCRYCFRRH--N 131 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +L+ AL Y++ + I EVI +GGDPL+ S ++L +++ L I H+Q LR Sbjct: 132 DYAQNILTPARLNEALTYLRSQRDITEVILSGGDPLLTSDRKLSELVAELEAIPHIQRLR 191 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV PQRI EL Q L ++ V + +H NHP E E A+++L GI LL+ Sbjct: 192 IHTRLPIVIPQRITTELCQRLGQSRFQVTLVVHCNHPKELDVEVGLAMAQLKAQGITLLN 251 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLK IN+ L L ++ + PYYLH D G +HF + + +++ +L+ Sbjct: 252 QTVLLKNINNCAATLETLSVELFKIGVLPYYLHTLDPVQGAAHFAQPMGDSKQLHQTLQA 311 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++ G P + ++PGG K I Sbjct: 312 RLPGYLVPKLVSEIPGGASKTLI 334 >gi|300113201|ref|YP_003759776.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii C-113] gi|299539138|gb|ADJ27455.1| lysine 2,3-aminomutase YodO family protein [Nitrosococcus watsonii C-113] Length = 335 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 99/322 (30%), Positives = 162/322 (50%), Gaps = 3/322 (0%) Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + Q+L + + + + + + +PNDP+ RQ Sbjct: 14 WQTALSQAVRNPQELLVLTGLDTHPQIASETTRRQFPLRVPRSYIARMKKGDPNDPLFRQ 73 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 P E I P DP+GD P G++ +Y R+LL C ++CR+CFRR Sbjct: 74 VFPLHAEDQISPGFNTDPVGDLAAMPAPGVLQKYTGRVLLVATGACAIHCRYCFRRHFPY 133 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + + AL YI + I EVI +GGDPL L+ RL ++ +TL I HV+ LR Sbjct: 134 GDH--NPAQEHWKRALQYIAQNQSIREVILSGGDPLTLADNRLAELAQTLATISHVKRLR 191 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P+R++ L+Q L+E + IHANH E + AA++ L++ G L + Sbjct: 192 IHTRLPVVLPERVDNHLLQWLEETSLQKVVVIHANHVNELDDRVAAALNDLSHVGCRLFN 251 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+GIND L++L + + PYYLH D G +HF + + Q++ +L+ Sbjct: 252 QTVLLRGINDKVGALSDLSEGLFDAGVLPYYLHLLDKVQGAAHFEVDLMSAQRLHRTLRA 311 Query: 300 KISGLCQPFYILDLPGGYGKVK 321 ++ G P + + G K+ Sbjct: 312 RLPGYLVPLLVQEQAGAPSKLP 333 >gi|94676743|ref|YP_589018.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] gi|94219893|gb|ABF14052.1| YodO family protein [Baumannia cicadellinicola str. Hc (Homalodisca coagulata)] Length = 339 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 97/319 (30%), Positives = 161/319 (50%), Gaps = 5/319 (1%) Query: 8 LTSAQDLYNANLIKKEQ--IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +T+ +L + +++ + IK + + + +P DP+ RQ + E Sbjct: 23 ITNPMELLQQLKLDQDKKLREAIK-ARQLFPFRVPKTFVKRMKYEDPTDPLLRQVLTLPE 81 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E + +DPI + ++ ++H+Y +R +L + C + CR+CFRR + Sbjct: 82 EFKQHLDFSKDPINEQQYNVAPMLLHKYYNRAILLVKSGCAINCRYCFRRYFPYQDNQS- 140 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + + + A+ YI++ S++ E+I +GGDPL+ L K+L L I H+ LR HSR+ Sbjct: 141 -NQANWKLAIEYIKQHSELNEIILSGGDPLMAKDHELDKLLNLLEDIPHLTKLRIHSRLL 199 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 IV P RI + Q L + V + H NH E +I++L N + LL+QSVLL+ Sbjct: 200 IVIPARITSFICQRLARSRLKVVLVTHINHAQEIDSSVQKSIAKLRNKQVTLLNQSVLLR 259 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GIND+ +ILA L T + I PYYLH D G +HF + + +KI+ L K++G Sbjct: 260 GINDNAQILATLSETLFSIGILPYYLHTLDCVQGATHFIVDDQRARKIMHDLLSKVAGYL 319 Query: 306 QPFYILDLPGGYGKVKIDT 324 P + D+ G K + Sbjct: 320 VPRLVRDISGMPSKTILSL 338 >gi|56461377|ref|YP_156658.1| lysine 2,3-aminomutase [Idiomarina loihiensis L2TR] gi|56180387|gb|AAV83109.1| Probable lysine 2,3-aminomutase [Idiomarina loihiensis L2TR] Length = 348 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 99/336 (29%), Positives = 156/336 (46%), Gaps = 4/336 (1%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q K T ++L A + E + +++ + + + NDP+ RQ Sbjct: 16 WQFELKQAYTQPEELLRALKLDPALFSEDIKARKLFAMRVPKPFVAQMQVGDSNDPLLRQ 75 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E P DP+ + P+ G++H+Y R+LL L C V CR+CFRR Sbjct: 76 VLPLHNEFESEPGYSTDPLQEQQG-PVNGLLHKYKSRVLLILQGGCAVNCRYCFRRHFPY 134 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + S + L YI++ +I EVI +GGDPL+ +RL+ ++ + + LR Sbjct: 135 DE--LTFSKRQLTETLEYIRQHPEINEVILSGGDPLMAKDERLKGLINEFELLPQLTRLR 192 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+P+V P R+ +L + L + + +HANH E S E A+ +AGI LL+ Sbjct: 193 IHSRLPVVIPSRLTHKLKEVLSNSRLQSVLVLHANHANEISPELAGALDDWHHAGIHLLN 252 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL G+ND+ L L R+ PYYLH D G SHF ++ E+ Q + + Sbjct: 253 QSVLLSGVNDNLTALIELSEKLFSARVMPYYLHQLDKVEGASHFAVSDEKAQALWQKMTH 312 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSY 335 ++ G P + + G K I + Sbjct: 313 ELPGFLVPRLVREEAGELSKTAIMPDGTNTLTEEKL 348 >gi|298528659|ref|ZP_07016063.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512311|gb|EFI36213.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 357 Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats. Identities = 111/340 (32%), Positives = 182/340 (53%), Gaps = 13/340 (3%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + + + L + I ++ I + TP A+L++P +P PI RQ +P +E Sbjct: 12 VNTREKLADYVDITPDEDAAI--TTMRTRWGTTPYFASLMDPQDPACPIRRQVVPSLKEK 69 Query: 68 NILPEEREDPIGDNNHSP----LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 ++ I N + I +Y DRI + VC YCR CFR+E+V Q Sbjct: 70 ENKYGIQDYLIHKENRAVGEKRPDCIARQYQDRIAFTVTDVCANYCRHCFRKELVVDQGL 129 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 ++ D + L +I+E ++ +V+ TGGDP ILS ++L +++ LR I HVQ++RF +R Sbjct: 130 SL--RFDVDEGLGWIREHPEVRDVLITGGDPFILSDEKLGRIITELRRIPHVQMIRFGTR 187 Query: 184 VPIVDPQRINPELIQCLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 PIV P RIN EL + L + PV+I NH E +EE + L G+ + +Q+V Sbjct: 188 TPIVLPSRINKELCEILGDFHRVPVWINTQCNHAREITEETARGVYDLMRCGVNVGNQAV 247 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL-KEKI 301 LLKGINDDP+ L + + +RI+PYY+ + + A G HFR +E+G +++ + Sbjct: 248 LLKGINDDPQSFRELHQKLLTVRIRPYYVFYCEPAPGIDHFRTPVEKGAELIRDAIRGHT 307 Query: 302 SGLCQPFYILDLPGGYGKVKIDT-HNIKKVGNGSYCITDH 340 +GLCQP Y+ + GKV + + +K+ + Y + ++ Sbjct: 308 TGLCQPMYV--IATNIGKVPLMPDYYLKEKTDEEYVLRNY 345 >gi|332977595|gb|EGK14363.1| KamA family protein [Psychrobacter sp. 1501(2011)] Length = 371 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 93/327 (28%), Positives = 160/327 (48%), Gaps = 5/327 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + +T L + I I + + + + +P DP+ Q Sbjct: 47 WQTQVADVITDIDQLLAILELSD--IKSELYIPKGFGLRVPKAFVAKMKKGDPKDPLLLQ 104 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P K E + DP+ +N +P+KG++H+Y R+L+ + C ++CR+CFR+ Sbjct: 105 VLPSKLEQAKISGYVTDPLAENEQNPIKGLLHKYHSRVLVTVTGACAIHCRYCFRQHF-- 162 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +G + S+ E YI + +I EV+ +GGDPL LS++RL L L + + +R Sbjct: 163 DYQGNLPKSEQLELIQDYISQHPEIREVLLSGGDPLSLSNRRLFLWLDALEALPQISTIR 222 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P+R++ EL+ L+ + + + +H NH E E + + GI LL+ Sbjct: 223 IHTRLPIVIPERLDSELLSRLQASRCRIVMVVHTNHANEIDEHTANYLLQARQKGITLLN 282 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL GIND + +L + PYYLH D G +HF +T ++ + + Sbjct: 283 QTVLLAGINDSVSVQVDLSERLFAAGVLPYYLHLLDKVEGAAHFDMTQRRAVELYWEMLQ 342 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326 ++ G P + +LP K +D +N Sbjct: 343 QLPGYLVPKLVQELPNRPFKTPVDLYN 369 >gi|77919981|ref|YP_357796.1| hypothetical protein Pcar_2387 [Pelobacter carbinolicus DSM 2380] gi|77546064|gb|ABA89626.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380] Length = 376 Score = 364 bits (934), Expect = 1e-98, Method: Composition-based stats. Identities = 103/342 (30%), Positives = 178/342 (52%), Gaps = 17/342 (4%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K +T+ + N +++ ++K + Y+ +LI+ ++P DPI R IP + Sbjct: 5 KYITNIDQIPELNRLEEHHRQKLKAVQKRYAFRSNGYYQSLIDWNDPKDPIRRIVIPSAD 64 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL P D G++ +S G+ H+YPD +L + VC CRFCFR+ + V Sbjct: 65 ELQ--PWGELDASGESLYSKAPGLEHKYPDTAVLLVSDVCGALCRFCFRKRLFMDDNQEV 122 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 +D A LAYI++ ++I V+ TGGDPL+LS ++L ++++ LR I+HV+I+R S++P Sbjct: 123 A--RDVSAGLAYIRKHTEINNVLVTGGDPLLLSTRKLTEIIEQLRAIEHVRIIRIGSKMP 180 Query: 186 IVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +P RI +PEL++ K +P +Y+ NHP E + EA A+ + +G+ ++ Q Sbjct: 181 AFNPFRILDDPELLEMFKAHSQPNRRIYLMAQFNHPRELTSEARRALDLVLQSGVTVMHQ 240 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 + +++G+ND E+L L + + PYY+ G + + + IEEG I A + Sbjct: 241 TPMIRGVNDSAEVLTELFNELSYMGVAPYYVFQCRPTEGNAAYTVPIEEGYAIFAKAHQN 300 Query: 301 ISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 SGL + Y L GK+++ + + H Sbjct: 301 CSGLARRCRYT--LSHATGKIEV-----AGLTDDQVFFRYHR 335 >gi|15642896|ref|NP_227937.1| hypothetical protein TM0121 [Thermotoga maritima MSB8] gi|4980613|gb|AAD35215.1|AE001698_4 conserved hypothetical protein [Thermotoga maritima MSB8] Length = 368 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 107/327 (32%), Positives = 182/327 (55%), Gaps = 15/327 (4%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 +L+ K TS + + E+ + +K + Y +LI+ +P+DPI + + Sbjct: 3 RLKVKYYTS---ITQVEQLSPEERERLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKIIV 59 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ + + Sbjct: 60 PEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINV 117 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R Sbjct: 118 GAEVI--RDITPQLDYIRTHKEITNVLLTGGDPLLLSTEKLEKIVSSLREIDHVQIIRIG 175 Query: 182 SRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 S++P +P RI +P+L++ +++ K +Y+ NHP E + EAI A++ L +AG + Sbjct: 176 SKIPAFNPYRIIDDPDLLKMIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAGAV 235 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 L +Q+ LL+GINDDPE+L L+ + + PYY+ +G F + IEEG +I Sbjct: 236 LCNQTPLLRGINDDPEVLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIFTK 295 Query: 297 LKEKISGLCQP-FYILDLPGGYGKVKI 322 ISG+ + Y+ + GK++I Sbjct: 296 AISNISGVAKRVRYV--MSHRTGKIEI 320 >gi|53804590|ref|YP_113783.1| hypothetical protein MCA1321 [Methylococcus capsulatus str. Bath] gi|53758351|gb|AAU92642.1| conserved hypothetical protein TIGR00238 [Methylococcus capsulatus str. Bath] Length = 323 Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats. Identities = 101/295 (34%), Positives = 158/295 (53%), Gaps = 2/295 (0%) Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKG 88 E + + + A + P +P DP+ RQ +P +EL DP+GD + G Sbjct: 31 AEAAGKFPFRVPRAYARKMRPGDPYDPLLRQVLPLAQELASPEGFVGDPVGDRPALKVPG 90 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 ++H+Y R LL C V+CR+CFRRE + + + + +AAL YI ++ E+I Sbjct: 91 LLHKYQGRALLITTGACAVHCRYCFRREFPYGE--SQFTRQREKAALDYIVRDPELTEII 148 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 +GGDPL+LS RL ++ K L I H++ LR HSRVP+V P RI+ L++ L Sbjct: 149 LSGGDPLLLSDDRLVRLTKQLTAIPHLRRLRVHSRVPLVLPSRIDERLLEILAGHRLKTV 208 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + IHANHP E E ++ ++ + AG+ LL+QSVLL+ +ND L L E + P Sbjct: 209 VVIHANHPRELDAETVSVLAAMRRAGLTLLNQSVLLRQVNDSVSALCELSERLFECGVLP 268 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 YYLH D GT+HF + E + + +L+ ++ G P + ++ G K+ + Sbjct: 269 YYLHLLDRVRGTAHFEVPEAEARALHEALRRRLPGFLVPRLVREVEGKPYKLPVS 323 >gi|119469128|ref|ZP_01612112.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7] gi|119447380|gb|EAW28648.1| putative lysine 2,3 aminomutase [Alteromonadales bacterium TW-7] Length = 337 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 93/317 (29%), Positives = 157/317 (49%), Gaps = 3/317 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +T + L + + + + + + + + + + NDP+ Q +P+ +E Sbjct: 21 VTCPKTLLEMVGLSSQVHENDLKARSLFPVRVPVPFIKKMRKGDANDPLLLQVMPRHQEF 80 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 +DP+ + ++ GI+H+Y R+L+ C V CR+CFRR + L+ Sbjct: 81 LKKSGFNKDPLLEQDNDQ-PGILHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LN 137 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 K AL YI+ + I EVI +GGDPL+ + L L + ++ +R HSR+P+V Sbjct: 138 KKSLLDALCYIKSDTNINEVILSGGDPLMAKDDAISWFLDELEKLPQIKRMRIHSRLPVV 197 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P RI EL L+++ + H NH E E AA+ +L +AG++LL+Q+V+LK + Sbjct: 198 IPARITDELCARLQKSPLKIVFINHINHANEIDGEFKAAMQKLKHAGVMLLNQAVILKDV 257 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND + NL + + PYYL+ D G SHF + E+ KI+A L + + G P Sbjct: 258 NDTVDAQVNLSEALFDADVLPYYLYLLDKVEGASHFDINEEQAIKIMAELLKALPGFLVP 317 Query: 308 FYILDLPGGYGKVKIDT 324 + ++ G K ID Sbjct: 318 KLVREIGGQKSKTPIDL 334 >gi|257063931|ref|YP_003143603.1| KamA family protein [Slackia heliotrinireducens DSM 20476] gi|256791584|gb|ACV22254.1| KamA family protein [Slackia heliotrinireducens DSM 20476] Length = 407 Score = 363 bits (933), Expect = 2e-98, Method: Composition-based stats. Identities = 103/328 (31%), Positives = 174/328 (53%), Gaps = 11/328 (3%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + ++ + Q L + + ++ I +Y + + P +L+NP++P+DP+ R Sbjct: 12 WQGILAESCSDIQQLRDFLQLSDADSTMLESIQENYPLLVNPYYLSLVNPNDPDDPVRRM 71 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 IP EEL+ D G++ + L G+ H+Y + L+ + C +YCR CFRR +VG Sbjct: 72 CIPAAEELDFSG--LADTSGESKSTVLPGLQHKYAETALVLSTNQCAMYCRHCFRRRLVG 129 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + ++ +A YI++ +I V+ +GGD L+ S++ L + L+ L I H++ +R Sbjct: 130 RDADETV--RNIDAVADYIRDHEEITNVLISGGDALMNSNETLFRYLEALAPIPHLKTIR 187 Query: 180 FHSRVPIVDPQRINPE--LIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGI 235 +R+P+V PQRI + LI L +++ NHP E + E+ AI L GI Sbjct: 188 LGTRIPVVLPQRITDDPGLIDLLSGFNHIVQLHVVTQFNHPNEITPESRDAIRILLELGI 247 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIV 294 + +Q+VLLKG+ND PE LA LM V + I PYY+ G F++ I G IV Sbjct: 248 PVRNQTVLLKGVNDTPETLARLMDDLVGIGIVPYYVFQCRPTVGVKNRFQVPILTGCNIV 307 Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKI 322 A + ++SGL + F + + GK+++ Sbjct: 308 AQARAQLSGLAKSFRYI-MSHDAGKIEL 334 >gi|170288623|ref|YP_001738861.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2] gi|170176126|gb|ACB09178.1| lysine 2,3-aminomutase YodO family protein [Thermotoga sp. RQ2] Length = 365 Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats. Identities = 108/329 (32%), Positives = 183/329 (55%), Gaps = 19/329 (5%) Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 M++++ T +T + L E+ + +K I Y +LI+ +P+DPI + Sbjct: 1 MKVKYYTSITQVEQL------SPEERERLKRIEEKYRFRANSYYLSLIDWSDPDDPIRKI 54 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ + Sbjct: 55 VVPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFI 112 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R Sbjct: 113 NVGAEVI--RDITPQLDYIRTHKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIR 170 Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAG 234 S++P +P RI +P+L+ +++ K +Y+ NHP E + EAI A++ L +AG Sbjct: 171 IGSKIPAFNPYRIIDDPDLLMMIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAG 230 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 +L +Q+ LL+GINDDPE+L L+ + + PYY+ +G F + IEEG +I Sbjct: 231 AMLCNQTPLLRGINDDPEVLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIF 290 Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKI 322 ISG+ + Y+ + GK++I Sbjct: 291 TKAISNISGVAKRVRYV--MSHRTGKIEI 317 >gi|254525082|ref|ZP_05137137.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp. SKA14] gi|219722673|gb|EED41198.1| lysine 2,3-aminomutase YodO family protein [Stenotrophomonas sp. SKA14] Length = 313 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 97/315 (30%), Positives = 153/315 (48%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + L + + + +++ + + + DP+ RQ +P EE+ Sbjct: 1 MRDPHALLARLQLDAAALGVSEAAMAQFALRVPEGFVARMRRGDAADPLLRQVLPIDEEM 60 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 P D +GD G++ +Y R LL C + CR+CFRR + Sbjct: 61 RPAPGFSFDAVGDGAARKATGVIQKYRGRALLVATGSCAINCRYCFRRHF--DYGAENAA 118 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + A+A I I EVI +GGDPL L+ +L ++ LR I H++ LR HSR+PIV Sbjct: 119 KGGWQEAVAAIAADPDIDEVILSGGDPLSLATHKLVELTDALRAIPHIRRLRIHSRLPIV 178 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P+R++ EL+ L P+ I +HANH EF AA++RL G LL+Q+VLL+G+ Sbjct: 179 LPERVDEELLAWLGSLPWPLAIVVHANHANEFDASVDAAMARLRGTGAQLLNQAVLLRGV 238 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND + L +L + + PYYLH D G +HF + + ++A L ++SG P Sbjct: 239 NDSVQALQDLSERSFAVGVLPYYLHQLDRVEGVAHFEVDDARAKALIAGLTARLSGYLIP 298 Query: 308 FYILDLPGGYGKVKI 322 + +LPG K + Sbjct: 299 KLVRELPGDPSKRPV 313 >gi|222099542|ref|YP_002534110.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359] gi|221571932|gb|ACM22744.1| L-lysine 2,3-aminomutase [Thermotoga neapolitana DSM 4359] Length = 365 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 107/372 (28%), Positives = 189/372 (50%), Gaps = 36/372 (9%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 ++ + TS + + E+ +++K + + LIN +P+DPI + IP Sbjct: 1 MKVRYYTSVTQVEQ---LSPEEKEKLKRVEERFRFRANSYYLGLINWSDPDDPIRKIIIP 57 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 +++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ + + Sbjct: 58 EEDELEE--WGSLDASSERSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFINVG 115 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HV I+R S Sbjct: 116 AEVI--RDITPQLDYIRSHKEITNVLLTGGDPLLLSTEKLEKIIGSLREIDHVHIIRIGS 173 Query: 183 RVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 ++P +P RI +PEL++ +++ K +Y+ NH E +EEAI A++ L +AG +L Sbjct: 174 KIPAFNPYRIIDDPELLRMIRKYSTKEKKIYVMTQFNHSKELTEEAIEAVNLLKDAGAVL 233 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+ LL+GIND PE L L+ + + PYY+ +G F + IE+G +I Sbjct: 234 CNQTPLLRGINDSPETLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEKGYEIFTKA 293 Query: 298 KEKISGLCQP-FYILDLPGGYGKVKI----------------DTHN-----IKKVGNGSY 335 +SG+ + Y+ + GK++I D N + + + Sbjct: 294 ISNLSGVAKRVRYV--MSHRTGKIEIAALTKNFIVFKYHRAHDEENRRKVMVYRRNPNAL 351 Query: 336 CITDHHNIVHDY 347 D+ ++ +Y Sbjct: 352 WFDDYTELIEEY 363 >gi|116753457|ref|YP_842575.1| lysine 2,3-aminomutase YodO family protein [Methanosaeta thermophila PT] gi|116664908|gb|ABK13935.1| L-lysine 2,3-aminomutase [Methanosaeta thermophila PT] Length = 392 Score = 362 bits (930), Expect = 4e-98, Method: Composition-based stats. Identities = 96/321 (29%), Positives = 175/321 (54%), Gaps = 12/321 (3%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + D+ + +K+++ ++ ++ +++ + +LI+ ++P DP+ + IP E+ Sbjct: 1 MRYVTDIMDVMQLKEDERKDLSSVTENFAFRASSYYLSLIDWNDPQDPLRKIVIPDANEM 60 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 +DP + +++ L G+ H+Y L+ + + C CRFCFR+ + Sbjct: 61 --YNWGTKDPSRERSYTVLPGLQHKYRQTALMLVSNACGSLCRFCFRKRIFIDSHHETA- 117 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 D AL YI+E +I V+ +GGDPL+LS +RL+++++ LR I HVQI+R +++P+ Sbjct: 118 -IDLPRALDYIREHREITNVLLSGGDPLMLSTERLEEIVRRLRDIDHVQIIRIGTKLPVY 176 Query: 188 DPQRINPE--LIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 +P RI + L++ +K +Y I NHP E S E + A+S+L AG I +SQ+ Sbjct: 177 NPFRITEDPSLLEIVKRYSHENRRIYFVIQFNHPKEISSETLKAVSQLQEAGAITVSQTP 236 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 LL+G+ND+PE LA L + + + PYY+ + G HF++ +E IV K S Sbjct: 237 LLRGVNDNPETLAQLFKKLSFIGVSPYYVFQCRPSIGNYHFQVPVETSYAIVEKAKSMCS 296 Query: 303 GLCQP-FYILDLPGGYGKVKI 322 GL + ++ + GK+++ Sbjct: 297 GLAKRAKFV--MSHATGKIEV 315 >gi|89902650|ref|YP_525121.1| hypothetical protein Rfer_3891 [Rhodoferax ferrireducens T118] gi|89347387|gb|ABD71590.1| L-lysine 2,3-aminomutase [Rhodoferax ferrireducens T118] Length = 393 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 99/328 (30%), Positives = 169/328 (51%), Gaps = 10/328 (3%) Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK-EELNILPEEREDPIGDNNHS-PL 86 + + ++IA+TP +A L++ +PN PI Q++P EE D +G+ + P Sbjct: 55 ETVYKKFAIAITPYMAKLMDRDDPNCPIRLQYLPSHFEETKPGFATSLDQLGEEGDTVPG 114 Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 +VHRYP R+L + + C CRFC R+ MV G+V + + EA++ YI I + Sbjct: 115 TSVVHRYPRRVLFLVSNTCATLCRFCTRKRMVSQPDGSV-AKDEIEASIDYIAGNQDIED 173 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 V+ +GGDP + +RL +L LR HV+ LR SR+ + P R+ PEL L++ Sbjct: 174 VLLSGGDPFTFTDERLDYILGELRRRAPHVRFLRIGSRMVVQMPTRVTPELCAVLEKHRV 233 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 + + IH NHP E + + + AGI++ Q+V LKG+NDD ++ L +E+ Sbjct: 234 QM-VNIHINHPKEITPLLRERVKMIQKAGIMMGLQTVCLKGVNDDVAVMRELFMQTIEMG 292 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 ++PYY++ D+ G HF + ++ L+ ISG P +++D GG GK+ I Sbjct: 293 VRPYYVYSTDMVEGAHHFIVPHRRMLELYEGLRGWISGPAIPTFVVDGLGGLGKLPITPS 352 Query: 326 NIKKV-----GNGSYCITDHHNIVHDYP 348 +++ + ++ + + P Sbjct: 353 YVREEELPDGSGTTVKCRNYKGMTIEMP 380 >gi|50085317|ref|YP_046827.1| putative aminomutase [Acinetobacter sp. ADP1] gi|49531293|emb|CAG69005.1| conserved hypothetical protein; putative aminomutase [Acinetobacter sp. ADP1] Length = 338 Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats. Identities = 96/321 (29%), Positives = 161/321 (50%), Gaps = 2/321 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL + + L ++ ++ + S+ + + + N + +P DP+ Q + Sbjct: 14 QLSDLIIDPFELLDQLDISSEQLLSGAILASDTFKLRVPRAFVNKMQKADPFDPLLLQVL 73 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EL PE DP+G+ + L G++H+Y R LL L C V+CR+CFRR + Sbjct: 74 PHHLELEDHPEFVTDPLGEEEANQLPGVLHKYQSRFLLTLTGACAVHCRYCFRRHFPYQE 133 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + D YIQ+ I EVI +GGDPL L++ +L+ ++ L + V+ILR H Sbjct: 134 N--LPKNNDWPQIQNYIQQHPLINEVILSGGDPLTLTNHKLKIWIERLESLPQVKILRIH 191 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SRVPIV P RI+ EL+ L+ + + + +H+NH E + + +L+ + + +Q+ Sbjct: 192 SRVPIVIPNRIDEELLSLLENSRLRIIMVVHSNHAAELDDFTCNQLHKLSLRNVTVFNQA 251 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLLKG+ND + L L + + R+ PYYLH D G HF L + + + + Sbjct: 252 VLLKGVNDSAQTLIELSQRLFDARVMPYYLHVLDKVKGAQHFDLESSKVDSLYKEVLAGL 311 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 G P + ++ G K + Sbjct: 312 PGYLVPKLVREIAGEKNKTPL 332 >gi|150020902|ref|YP_001306256.1| lysine 2,3-aminomutase YodO family protein [Thermosipho melanesiensis BI429] gi|149793423|gb|ABR30871.1| lysine 2,3-aminomutase YodO family protein [Thermosipho melanesiensis BI429] Length = 370 Score = 361 bits (928), Expect = 7e-98, Method: Composition-based stats. Identities = 114/360 (31%), Positives = 188/360 (52%), Gaps = 31/360 (8%) Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73 + + + +++ E+K+++ Y +LIN +PNDPI + IPQ EEL Sbjct: 9 IEKVDQLTEKEKQELKKVTEKYKFRANDYYLSLINWEDPNDPIRKLIIPQLEELEE--WG 66 Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 + D + +++ KG+ H+Y D LL + VC +CRFCFR+ + + V +D Sbjct: 67 KLDASNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINIGEEVA--RDVTE 124 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI- 192 L YI++ +I V+ TGGDPL+LS K+L+K++ +R I+HVQI+R S++ +P RI Sbjct: 125 DLEYIKKHKEITNVLLTGGDPLLLSTKKLEKIISQIREIEHVQIIRIGSKMVAFNPYRII 184 Query: 193 -NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 +PELI+ +K+ K +YI NHP E +E+AI A++ L AG IL +Q+ L+KG+N Sbjct: 185 EDPELIELIKKYSTNEKKIYIMTQFNHPRELTEQAIIAVNMLQKAGAILANQTPLIKGVN 244 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 DD + L L + + + PYY+ AG F + +EEG +I +SGL + Sbjct: 245 DDWKTLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEGYQIFLKAIMNVSGLAKRA 304 Query: 309 YILDLPGGYGKVKID-------------THN--------IKKVGNGSYCITDHHNIVHDY 347 + GK+++ HN + K +Y D++ +V +Y Sbjct: 305 RFA-MSHETGKIEVSALTKEHIIFRYQRAHNPKNAGKIMVFKRNPNAYWFDDYNELVEEY 363 >gi|253576596|ref|ZP_04853924.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14] gi|251844010|gb|EES72030.1| lysine 2,3-aminomutase [Paenibacillus sp. oral taxon 786 str. D14] Length = 389 Score = 361 bits (928), Expect = 8e-98, Method: Composition-based stats. Identities = 101/340 (29%), Positives = 175/340 (51%), Gaps = 15/340 (4%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72 D+ + + +++ E+K I++ + + NLI+ ++P DPI + IP EL Sbjct: 9 DIAKVSQLSEQERQELKPITDKFVFRVNDYYLNLIDWNDPEDPIRKLVIPNTGELKE--Y 66 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 R D + + + G H+Y LL + VC YCR+CFR+ + + + D Sbjct: 67 GRWDASDEAANYVVPGCQHKYRTTALLIVSEVCGSYCRYCFRKRLF--RNDVKEAMADVT 124 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 + YI + +I ++ TGGD LIL+ K+L+ +L+ LR I+HV+I+R S++P+ +P RI Sbjct: 125 PGIEYIAQHPEINNILLTGGDSLILATKKLRSILERLRAIEHVKIIRLGSKIPVFNPMRI 184 Query: 193 --NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 +PEL+ ++E + +Y+ H NHP E + EA L +AG I+++Q+ +LKGI Sbjct: 185 YEDPELLDLIREFSTVDQRIYVMAHINHPREITPEAKRGFQALHDAGAIVVNQTPILKGI 244 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 NDD +L L+ + PYY AG + F + ++ ++V K + SGL + Sbjct: 245 NDDAAVLGELLDRLSWAGVTPYYFFINRPVAGNADFVIPLKRAYQLVEEAKARTSGLGKR 304 Query: 308 FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 L + GK++I + NG + H + +Y Sbjct: 305 VR-LSMSHSSGKIEI-----LAIENGQAYLKYHQSRDGEY 338 >gi|301166960|emb|CBW26539.1| putative L-lysine 2,3-aminomutase [Bacteriovorax marinus SJ] Length = 447 Score = 361 bits (928), Expect = 8e-98, Method: Composition-based stats. Identities = 96/371 (25%), Positives = 188/371 (50%), Gaps = 25/371 (6%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55 QL++ ++ + + I KE +D+IK + +TP I LI+ +P + P Sbjct: 42 WQLKN-SIRKVEQVEKVLGSKISKEHMDDIKAGQKITPMNIRITPYIFALIDWRDPLSCP 100 Query: 56 IARQFIPQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 + +QF+P + L P + D +G++ SP+ + HRYPD++L +CPVYC +C R Sbjct: 101 LRKQFLPMGSQFLEDHPYYQSDSLGEDVDSPVPMLTHRYPDKVLFLPTTICPVYCSYCTR 160 Query: 115 REMVGSQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 ++G ++ + K + Y+ ++ +V+ +GGD +L+ K+++ + + Sbjct: 161 SRIIGGSTESIEKETYGANQKKWDDVFEYLSNHPKVEDVVVSGGDAFMLTPKQIRYIGEN 220 Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEF 219 L I H++ +R ++ + PQ++ + + + + + GK V I H + E Sbjct: 221 LLRIPHIRRIRLATKGVAIFPQKVLTDDDWFEAVQDIHKLGRSFGKQVVIHTHFSCAKEI 280 Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279 ++ + A+ RL AGI++ +Q+VL +G+N+ + + L R L I+PYY++ D+ G Sbjct: 281 TKWSQMAMDRLFQAGIVVRNQAVLQEGVNNHVDEMVLLTRQVGYLNIQPYYVYMHDMVPG 340 Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339 HFR T++E +++ +++ +G P ++ DLPGG GK + ++ NG Sbjct: 341 CEHFRTTLKEAEELEKAVRGTTAGFNTPTFVCDLPGGGGKRHVASYEYYDEENGISVWKA 400 Query: 340 HH---NIVHDY 347 H + Y Sbjct: 401 PHVKPGELFTY 411 >gi|149179351|ref|ZP_01857910.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797] gi|148841823|gb|EDL56227.1| hypothetical protein PM8797T_29123 [Planctomyces maris DSM 8797] Length = 335 Score = 361 bits (928), Expect = 8e-98, Method: Composition-based stats. Identities = 106/326 (32%), Positives = 174/326 (53%), Gaps = 6/326 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + Q+L + + ++ ++ + ++ + + + N I P + +DP+ +Q Sbjct: 10 WQKSLAQAIRDPQELISRLNLPQDLLEPARRSAHLFPLMVPVSYLNRIEPGSLDDPLLKQ 69 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P + E +P D +GD N GI+ +Y R LL + C ++CR+CFRR Sbjct: 70 ILPVELENADIPGFETDAVGDLNVRATPGILQKYHGRALLMVSGACAIHCRYCFRRHYPY 129 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + L+ D E +Q S + E+I +GGDPL+L+ RL + + + I HV+ LR Sbjct: 130 GDEPRTLA--DWEPVWQSLQADSTVQEIILSGGDPLLLTDLRLNDLCERIAAIPHVKRLR 187 Query: 180 FHSRVPIVDPQRINPELIQCL---KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 HSR+P+V P RI+ L++ L E G ++ IH NHP E + + AI ++ AGI Sbjct: 188 IHSRLPVVLPDRIHAGLLEMLHGLTEQGTMPWMVIHINHPNEIAPDVELAIKQMLQAGIP 247 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 +L+QSVLLKGIND E L L V L + PYYLH D G +HF + +G+K++ Sbjct: 248 VLNQSVLLKGINDTAETLIELSEKLVNLGVIPYYLHQLDRVTGAAHFEVPQAQGRKLIEE 307 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322 L+ ++ G P Y+ ++PG K + Sbjct: 308 LRTRLPGYAVPQYVREIPGEPHKTSL 333 >gi|281412181|ref|YP_003346260.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila RKU-10] gi|281373284|gb|ADA66846.1| lysine 2,3-aminomutase YodO family protein [Thermotoga naphthophila RKU-10] Length = 365 Score = 361 bits (928), Expect = 8e-98, Method: Composition-based stats. Identities = 107/329 (32%), Positives = 182/329 (55%), Gaps = 19/329 (5%) Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 M++++ T +T + L E+ +K + Y +LI+ +P+DPI + Sbjct: 1 MKVKYYTSITQVEQL------SPEERGRLKRVEEKYRFRANSYYLSLIDWSDPDDPIRKI 54 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P+++EL D + +++ KG+ H+YPD L + VC +CRFCFR+ + Sbjct: 55 IVPEEDELEE--WGTLDASNEKSYTVAKGLQHKYPDTALFLVNDVCGGFCRFCFRKRLFI 112 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + V+ +D L YI+ +I V+ TGGDPL+LS ++L+K++ +LR I HVQI+R Sbjct: 113 NVGAEVI--RDITPQLDYIRSHKEITNVLLTGGDPLLLSTEKLEKIVSSLREINHVQIIR 170 Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAG 234 S++P +P RI +P+L+ +++ K +Y+ NHP E + EAI A++ L +AG Sbjct: 171 IGSKIPAFNPYRIIDDPDLLMMIRKYSTKEKKIYVMTQFNHPRELTREAIEAVNLLKDAG 230 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 +L +Q+ LL+GINDDPE+L L+ + + PYY+ +G F + IEEG +I Sbjct: 231 AMLCNQTPLLRGINDDPEVLGELLDRLSFVGVTPYYVFQNRPVSGNRKFAVPIEEGYEIF 290 Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKI 322 ISG+ + Y+ + GK++I Sbjct: 291 TKAISNISGVAKRVRYV--MSHRTGKIEI 317 >gi|71066234|ref|YP_264961.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4] gi|71039219|gb|AAZ19527.1| L-lysine 2,3-aminomutase [Psychrobacter arcticus 273-4] Length = 335 Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats. Identities = 100/327 (30%), Positives = 169/327 (51%), Gaps = 5/327 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + +TS +L ++ + + + H+ + + + + +DP+ RQ Sbjct: 11 WQTQLSEAITSIDELLEILQLQSLRSEVY--VPEHFELRVPRAFVAKMTVGDRDDPLLRQ 68 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P ++E + DP+ +N H+P+KG++H+Y R+LL L C ++CR+CFR+ Sbjct: 69 VLPHQKERITVAGYVADPLAENAHNPVKGVLHKYQSRLLLTLTGACAIHCRYCFRQHFDY 128 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 S S+K + + YI +I E+I +GGDPL ++++RL L TL I+ + +R Sbjct: 129 SANMPTASAK--QDIIDYISAHPEINEIILSGGDPLNVTNRRLFAWLDTLEAIEQLTTIR 186 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P R++ L++ L ++ + + IH NH E + R AGI LL+ Sbjct: 187 IHTRLPLVIPARLDDALLERLAQSCCQIVMVIHGNHANEIDTLTAEYLRRARAAGITLLN 246 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLKGIND L + + PYYLH D AG +HF ++ SL Sbjct: 247 QAVLLKGINDSVSAQMALSQRLFAAGVLPYYLHVLDKVAGAAHFDRDERSAIELYWSLLA 306 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326 K+ G P + +LP KV I+ +N Sbjct: 307 KLPGYLVPKLVRELPNKPFKVPINVYN 333 >gi|254447007|ref|ZP_05060474.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium HTCC5015] gi|198263146|gb|EDY87424.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium HTCC5015] Length = 343 Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats. Identities = 108/318 (33%), Positives = 158/318 (49%), Gaps = 4/318 (1%) Query: 7 TLTSAQDLYNANLIK--KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 +TS +L + ++ + +S+ + + + +DP+ Q +PQ Sbjct: 28 AVTSPAELLRLVGLDQHPRWKEQAERAQPPFSLKVPRSYIHRMQFGCADDPLLLQALPQA 87 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E + DP+GD N G++H+Y R+LL C ++CR+CFRRE Q Sbjct: 88 VEHAEVAGFSADPVGDLNAQKTTGLLHKYHGRVLLVATGACAIHCRYCFRREYPYEQASA 147 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 S + +L YI S I EVI +GGDPL LS KRL K++ + I HVQ LR HSR+ Sbjct: 148 TQS--QWQESLDYIAADSSIHEVILSGGDPLTLSDKRLHKLIDRIETISHVQRLRIHSRL 205 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 PIV P R+ L Q L ++ + +HANH E A+ L AG+ L+Q+VLL Sbjct: 206 PIVLPSRVTETLCQRLAQSRLRCIMVVHANHAQELDHTTAKALQDLRRAGVDCLNQAVLL 265 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 GIND E LA L E PYYLH D G +HF + + +VA L+E++SG Sbjct: 266 AGINDSVEALAQLSERLFEQGALPYYLHSLDRVHGAAHFEVDEARAKHLVAQLRERLSGY 325 Query: 305 CQPFYILDLPGGYGKVKI 322 P + ++ G K + Sbjct: 326 LVPTLVREIEGESSKTPL 343 >gi|87118912|ref|ZP_01074811.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121] gi|86166546|gb|EAQ67812.1| hypothetical protein MED121_17834 [Marinomonas sp. MED121] Length = 351 Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats. Identities = 100/318 (31%), Positives = 161/318 (50%), Gaps = 3/318 (0%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 ++H + L + + K + + + I N NDP+ RQ +P Sbjct: 27 IKH-AIKDLDTLAKKLNLNLTSVLTGKHAHKAFQLMVPMPYLERIEKGNLNDPLLRQILP 85 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 EE+ + DP+ + +H+P K +VH+Y RIL+ C + CR+CFRR + Sbjct: 86 IDEEMKQVKGYVTDPLAELDHNPKKALVHKYSSRILVITSGSCAINCRYCFRRHFPYANN 145 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 L+ + ++ L+YIQ QI EVI +GGDPL++ K+L +++ L + ++ LR H+ Sbjct: 146 --HLAPAEWDSLLSYIQTHPQINEVILSGGDPLMMKDKQLSQLISRLEALPQLKRLRIHT 203 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+PIV P RIN EL+ + V + +H NH E + I A S+LA G+ LL+Q V Sbjct: 204 RLPIVIPSRINNELLNWASQTRLKVIMVLHINHANEIDGKVIEACSKLAKIGVRLLNQGV 263 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 +LK +ND E L + I PYY+ D G SHF +TI++ Q+++ + + Sbjct: 264 ILKNVNDTAEAQIALSEALFDADILPYYMFTLDPVEGASHFDITIDQAQQLMGQVAANLP 323 Query: 303 GLCQPFYILDLPGGYGKV 320 G P ++PG K Sbjct: 324 GYLVPKLAKEIPGKTAKT 341 >gi|262368517|ref|ZP_06061846.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046] gi|262316195|gb|EEY97233.1| L-lysine 2,3-aminomutase(KAM) [Acinetobacter johnsonii SH046] Length = 338 Score = 359 bits (923), Expect = 3e-97, Method: Composition-based stats. Identities = 100/324 (30%), Positives = 159/324 (49%), Gaps = 4/324 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q + +T +L N I EQ+ S + + + + NP DP+ Sbjct: 11 WQAQLSDLITDPLELLNILEISPEQLLSGALLASTQFKLRVPRAFVTRMQKGNPLDPLLL 70 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q +P EL P+ DP+G+ + G++H+Y R LL L C V+CR+CFRR Sbjct: 71 QVLPHHLELEEHPDFVTDPLGEEQANQQPGVLHKYKTRFLLTLTGACAVHCRYCFRRHFP 130 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + S+D YIQ + I EVI +GGDPL LS+++++ ++ L I ++ L Sbjct: 131 YQEN--LPKSEDWINIQHYIQSQPDINEVILSGGDPLTLSNRKIKLWIERLESIPQLKFL 188 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R HSRVPIV P R++ ELI LK + + + +H+NH E + + + I + Sbjct: 189 RIHSRVPIVMPNRVDDELISILKNSRLRIILVVHSNHASELDDFTCRQLQQFVAEKITVF 248 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKG+ND +IL +L + + PYYLH D G HF L ++ + L Sbjct: 249 NQAVLLKGVNDHVQILTDLSYRLFDAGVLPYYLHVLDKVKGAHHFDLNPQDIDFLYQGLL 308 Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322 + G P + ++ G K + Sbjct: 309 ANLPGYLVPKLVREIAGEKNKTPL 332 >gi|303328383|ref|ZP_07358821.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3] gi|302861713|gb|EFL84649.1| L-lysine 2,3-aminomutase [Desulfovibrio sp. 3_1_syn3] Length = 378 Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats. Identities = 103/345 (29%), Positives = 182/345 (52%), Gaps = 16/345 (4%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 + ++ +T+A+ L ++E +++++ IS + ++ P +LI+P +P+DPI + +P Sbjct: 1 MLNENMTTAEQLQKHIFFREEHLEQLQRISKRFPFSIPPYYLSLIDPSDPHDPIRKMCVP 60 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 +EL+ P R D G+ +++ L G+ H+Y L+ + C +YCR CFR+ +VG + Sbjct: 61 ALDELD--PGGRLDTSGEASNTVLTGLQHKYRQTALVLSTNACAMYCRHCFRKRLVGLEG 118 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 +D LAYI++ +I V+ +GGD L+ L + L+ L ++H+ ++R S Sbjct: 119 RETRPRRD--KVLAYIRKHHEISNVLLSGGDALLNPTPVLHEYLEELSGMEHLDVVRICS 176 Query: 183 RVPIVDPQRINPE--LIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R P+V P RI + L+ KE G K + + NHP E S +A A+ L G+++ Sbjct: 177 RTPVVLPMRIYMDQKLLDLFKEYGAQKHLCLVTQFNHPRELSPQAQRALDALQECGVMVR 236 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIVASL 297 +Q+VLL G+ND L L++ V + PYY+ G +F++ I + IV Sbjct: 237 NQTVLLHGVNDHGPTLGKLLKELVRRGVVPYYVFQCRPVTGVKNNFQVPIAQAYAIVEEA 296 Query: 298 KEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 K+ +GL + Y+ L GK++I + VGNG + H Sbjct: 297 KQMQNGLGKAFRYV--LSHETGKIEI----LGPVGNGRWLFKYHQ 335 >gi|239618040|ref|YP_002941362.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF 19.5.1] gi|239506871|gb|ACR80358.1| lysine 2,3-aminomutase YodO family protein [Kosmotoga olearia TBF 19.5.1] Length = 366 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 104/322 (32%), Positives = 168/322 (52%), Gaps = 13/322 (4%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K LT + + K + +++K+++ + NLI +PNDPI R IP + Sbjct: 5 KYLTRIDQISQ---LDKTEKEKLKKVTEKFVFRTNEYYLNLIKWDDPNDPIKRIIIPSMD 61 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL D ++ ++ G+ H+Y D L+ + VC CRFCFR+ + + + Sbjct: 62 ELIE--WGELDASNEHKYTVAPGLEHKYKDTALMLVSRVCGGICRFCFRKRVFLAGNREI 119 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + D E L YI++ +I V+ +GGDPL+LS +L+ ++ LR I HVQI+R +++ Sbjct: 120 M--IDVEPGLEYIKKHKEITNVLLSGGDPLMLSTSKLENIISRLRKIDHVQIIRIGTKMV 177 Query: 186 IVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 +P RI +P+LI+ LK+ K +YI NHP E ++ AI AI+ L AG L +Q Sbjct: 178 AFNPYRIIDDPKLIELLKKYSTPKKRIYIMTQFNHPREITDVAIEAINLLKEAGTELANQ 237 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 + L++GIND PE LA L R + + PYY+ G + + IEEG +I Sbjct: 238 TPLIRGINDSPETLAELFRKLSFIGVPPYYVFQCRPTKGNKAYSVPIEEGYEIFRKATAM 297 Query: 301 ISGLCQPFYILDLPGGYGKVKI 322 +SGL + + GK+++ Sbjct: 298 VSGLAKRARFA-MSHMTGKIEV 318 >gi|116207106|ref|XP_001229362.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51] gi|88183443|gb|EAQ90911.1| hypothetical protein CHGG_02846 [Chaetomium globosum CBS 148.51] Length = 498 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 115/343 (33%), Positives = 174/343 (50%), Gaps = 26/343 (7%) Query: 31 ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNI-LPEEREDPIGDNNHSPLKG 88 + ++ +TP I + IN HNP +DPIARQF+P K + P+ D + + SP+KG Sbjct: 143 TAATMAVRMTPYILSRINWHNPRHDPIARQFLPLKSRMIPDHPKLTLDSLHEEADSPVKG 202 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKS 142 +VHRYPD+ L VCP YC FC R VG+ TV + + ALAYI + Sbjct: 203 LVHRYPDKALFLPTSVCPTYCTFCTRSYAVGADTATVSKASLKPGRRRWDEALAYIASQP 262 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NP 194 Q+ +++ +GGD L ++L+++ + L I H++ RF S+ V P R+ Sbjct: 263 QLQDIVVSGGDAYYLQAEQLEQLGERLIAIPHIRRFRFASKGLAVAPGRVLDRSGDGWTD 322 Query: 195 ELIQ---CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 L++ + AGK V H NHP E S AA RL G+++ +QSVLL+G+NDD Sbjct: 323 ALVRVSDRARRAGKAVAWHTHFNHPSEISWVTEAAAQRLFEEGVMVRNQSVLLRGVNDDV 382 Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 E + L+R I PYY++ D+ H R + + A L+ I+G P +++ Sbjct: 383 ETMGALIRGLANNNIFPYYVYQCDMVKSVEHLRTPLRTILDLEAKLRGSIAGFMMPSFVV 442 Query: 312 DLPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347 DLPGG GK ++ + G Y D N V++Y Sbjct: 443 DLPGGGGKRLACSYESYDRATGISRYTAPAVTGRDKENKVYEY 485 >gi|332534315|ref|ZP_08410158.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas haloplanktis ANT/505] gi|332036225|gb|EGI72698.1| lysine 2,3-aminomutase YodO family protein [Pseudoalteromonas haloplanktis ANT/505] Length = 329 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 91/317 (28%), Positives = 155/317 (48%), Gaps = 3/317 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +T + L + + + + + + + + I +PNDP+ Q +P+ +E Sbjct: 13 VTCPKTLLEMVGLSSQVHENDLKARSLFPVRVPIPFIKKIRKGDPNDPLLLQVMPRHQEF 72 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 +DP+ + ++ G++H+Y R+L+ C V CR+CFRR + L+ Sbjct: 73 LTKSGFNKDPLLEQDNDQ-PGLLHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LN 129 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 K L+YI+ S I EVI +GGDPL+ + L L + ++ +R HSR+P+V Sbjct: 130 KKSLLETLSYIKSDSNINEVILSGGDPLMAKDDAISWFLDELEQLPQIKRMRIHSRLPVV 189 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P R+ EL + L ++ + H NH E + AA+ +L A + LL+Q+V+LK + Sbjct: 190 IPTRVTDELCERLAKSPLKIIFINHINHANEIDADFKAAMQKLKQANVTLLNQAVILKDV 249 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND + NL + + PYYL+ D G SHF + E+ KI+A L + + G P Sbjct: 250 NDTLDAQINLSEALFDADVLPYYLYLLDKVEGASHFDINEEDAIKIMAELLKALPGFLVP 309 Query: 308 FYILDLPGGYGKVKIDT 324 + ++ G K ID Sbjct: 310 KLVREIGGQKSKTPIDL 326 >gi|88798858|ref|ZP_01114440.1| radical SAM domain protein [Reinekea sp. MED297] gi|88778338|gb|EAR09531.1| radical SAM domain protein [Reinekea sp. MED297] Length = 346 Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats. Identities = 99/325 (30%), Positives = 168/325 (51%), Gaps = 3/325 (0%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q K + +L + +K ++ + ++ + + +T +A+L+ NP DP+ Q Sbjct: 24 WQKSIAKGFRTPSELLDYLNLKTSELPYQIDPNSPFRMRITRHLASLMEKGNPFDPLLLQ 83 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 IP+ +E P + DP+ + ++ + G++H+Y +R+L+ C ++CR+CFRR Sbjct: 84 LIPRLDETTEQPGYQTDPLMEEDYQVIPGLIHKYQNRVLIIAHQACAIHCRYCFRRHFPY 143 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 S+ LS +A YIQ S I EVIF+GGDPL L+ + L +++ + +Q +R Sbjct: 144 SE--ARLSESSLDAIEQYIQSHSDIDEVIFSGGDPLSLADEALSNLIQRFDRLPQIQTVR 201 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R P+ P+RI L+ L V + +H NHP E + +A RL + + LL+ Sbjct: 202 LHTRTPVAAPERITETLLNTLNNLSCQVVMVVHINHPNELHPDLLAKFLRLRDINVTLLN 261 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL+GIND + L + + PYYLH D GTSHF + + +I ++ Sbjct: 262 QSVLLRGINDCSKTQIRLCKQLFAHGVLPYYLHSLDPVQGTSHFDVNQQTAGQIWLEMQA 321 Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324 +SG P + ++P + K I Sbjct: 322 GLSGYLLPRLVREIPQRHSKTWIHP 346 >gi|294664930|ref|ZP_06730245.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292605300|gb|EFF48636.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 342 Score = 358 bits (920), Expect = 7e-97, Method: Composition-based stats. Identities = 96/323 (29%), Positives = 155/323 (47%), Gaps = 3/323 (0%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + + L + + + + + + + + +DP+ RQ Sbjct: 22 WQQQWRDAVRDPRVLLQLLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E+ P D +GD G++ +Y R LL C V+CR+CFRR Sbjct: 82 VLPLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +++ + A+A I I EV+ +GGDPL L+ +L ++ L + H++ LR Sbjct: 142 AEE--TATRDGWRDAVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAVPHLKRLR 199 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+PIV P+R++ L+ L+ PV +HANH EF AA L AG LL+ Sbjct: 200 IHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLREAGAQLLN 259 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+G+ND + LA L + PYYLH D AG +HF + + + A L Sbjct: 260 QAVLLRGVNDSVDALAALSERSFVAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++SG P + ++PG GK + Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342 >gi|319789677|ref|YP_004151310.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio ammonificans HB-1] gi|317114179|gb|ADU96669.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio ammonificans HB-1] Length = 372 Score = 358 bits (920), Expect = 7e-97, Method: Composition-based stats. Identities = 102/323 (31%), Positives = 170/323 (52%), Gaps = 13/323 (4%) Query: 8 LTSAQDLYNA--NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 S +++ A I + ++++E+ + + + A LI+ +PNDPI P + Sbjct: 6 FKSLEEVEQAFGVKIPDSEREKLQEVIEKHPMFIPDYYARLIDWSDPNDPIKNIIFPSLD 65 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL++ D G+ ++ L G+ H+Y + LL + + C YCR CFR+ +VG Sbjct: 66 ELDVSGSY--DTSGEKENTVLTGLQHKYKETALLLVTNRCAGYCRHCFRKRLVGIPTNET 123 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 L K + A+ YI+E +I V+ +GGDPL+L ++ L L I H++ +RF SRVP Sbjct: 124 L--KLFDRAVEYIKEHPEITNVLISGGDPLVLPTDVIEYFLSELSKIPHLKFIRFGSRVP 181 Query: 186 IVDPQRINPE--LIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 + P RI + L++ + P VY+ H NHP E ++EA A+ L AG+ + +Q Sbjct: 182 VFYPMRIYEDTKLLEVFSKYSTPERRVYLVTHFNHPNEVTKEARKAVDSLIRAGVPVSNQ 241 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQKIVASLKE 299 +VLLKG+ND PE+LA LM+ + PYY+ +HF++ ++EG IV K Sbjct: 242 TVLLKGVNDTPEVLATLMKEITSAGVIPYYVFQCRPVSRVKTHFQVPLKEGYWIVEGAKR 301 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 + G + + + GK++I Sbjct: 302 MLDGHAK-RFKYIMSHKTGKIEI 323 >gi|71276242|ref|ZP_00652521.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon] gi|71900995|ref|ZP_00683107.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1] gi|170730740|ref|YP_001776173.1| hypothetical protein Xfasm12_1634 [Xylella fastidiosa M12] gi|71163003|gb|EAO12726.1| Protein of unknown function DUF160 [Xylella fastidiosa Dixon] gi|71729246|gb|EAO31365.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1] gi|167965533|gb|ACA12543.1| conserved hypothetical protein [Xylella fastidiosa M12] Length = 357 Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats. Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 2/321 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q+ + + ++L + + + + + + + + + +DP+ RQ + Sbjct: 39 QVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVARMRVGDLHDPLLRQVL 98 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E + + D +GD GI+ +Y RILL C V+CR+CFRR ++ Sbjct: 99 PMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 158 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 S A A+++ I EVI +GGDPL LS +L ++ LR I H++ LR H Sbjct: 159 D--TASHDRWREAAAFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRSIAHLKRLRIH 216 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P+RI+ L++ L PV IHANH EF AA++ L G LL+Q+ Sbjct: 217 SRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 276 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+ND+ LA L + PYYLH D AGT+H+ + + + A L ++ Sbjct: 277 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVARL 336 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 SG P ++ ++PG K + Sbjct: 337 SGYLVPRFVREVPGDSSKRPL 357 >gi|225403174|ref|ZP_03760471.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme DSM 15981] gi|225043179|gb|EEG53425.1| hypothetical protein CLOSTASPAR_04502 [Clostridium asparagiforme DSM 15981] Length = 364 Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats. Identities = 102/341 (29%), Positives = 179/341 (52%), Gaps = 18/341 (5%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +T A++L + E+ ++ I H+ + +T +LIN +P DPI R IP EE Sbjct: 11 ITKAEELRGYLKLSDEETSRLEAILEHFPMTITRYYLSLINWDDPKDPIRRMCIPSIEEN 70 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 ++ + D G+ +++ L G+ H+Y + +L+ H C +YCR CFR+ +VG Sbjct: 71 DMTGKF--DTSGEADNTILPGLQHKYNETVLILSTHRCAMYCRHCFRKRLVGISDDETA- 127 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + YI++ ++I + +GGD + S+ +++ L+ I+H+ ++RF +R P+V Sbjct: 128 -DNVAEMADYIRQHAEISNALISGGDAFLNSNAVIRRYLELFSDIEHLDLIRFGTRTPVV 186 Query: 188 DPQRI--NPELIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 P RI +PEL++ L+ K +Y+ NHP E + EA A+ L NAG++L +Q+VL Sbjct: 187 LPARIYDDPELLETLQTYSQRKKIYVVTQFNHPAELTGEAKKAVDALLNAGVVLKNQTVL 246 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLK--EK 300 LKG+NDD + L++ I PYY+ +G HF++ + EG +IV K + Sbjct: 247 LKGVNDDGRTMGELLKGLTRWGIAPYYIFQCRPVSGVGGHFQVPLTEGYRIVEEAKQFQN 306 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 G C Y+ + GK++I + ++ +G H Sbjct: 307 GPGKCV-RYV--MSHVTGKIEI----LGQLPDGQMLFKYHQ 340 >gi|294624428|ref|ZP_06703117.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292601277|gb|EFF45325.1| conserved hypothetical protein [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 342 Score = 357 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 95/323 (29%), Positives = 154/323 (47%), Gaps = 3/323 (0%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + + L + + + + + + + + +DP+ RQ Sbjct: 22 WQQQWRDAVRDPRVLLQLLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E+ P D +GD G++ +Y R LL C V+CR+CFRR Sbjct: 82 VLPLDAEMQPAPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +++ + A+ I I EV+ +GGDPL L+ +L ++ L + H++ LR Sbjct: 142 AEE--TAARDGWRDAVVAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAVPHLKRLR 199 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+PIV P+R++ L+ L+ PV +HANH EF AA L AG LL+ Sbjct: 200 IHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLREAGAQLLN 259 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+G+ND + LA L + PYYLH D AG +HF + + + A L Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++SG P + ++PG GK + Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342 >gi|297583799|ref|YP_003699579.1| lysine 2,3-aminomutase YodO family protein [Bacillus selenitireducens MLS10] gi|297142256|gb|ADH99013.1| lysine 2,3-aminomutase YodO family protein [Bacillus selenitireducens MLS10] Length = 386 Score = 357 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 106/352 (30%), Positives = 178/352 (50%), Gaps = 23/352 (6%) Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73 + + E+ ++K+I+ + + LI+ +P DPI + IP + EL Sbjct: 10 IEKVPHLSDEEKAKLKQITEKFVFRVNEYYLGLIDWGDPKDPIRKLVIPNEGELEE--YG 67 Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 R D ++ + + G H+Y + LL + VC YCR+CFR+ + + +S D + Sbjct: 68 RWDASDEDTNYVVPGCQHKYDETALLIVSEVCGAYCRYCFRKRLFRNDIKEAMS--DVQP 125 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI- 192 + YI+E +I V+ TGGD LIL+ K+L+ +++ LR I HV+I+R S++P+ +P RI Sbjct: 126 GIDYIKEHPEISNVLLTGGDSLILATKKLRFIIEQLREIPHVKIIRLGSKMPVFNPMRIY 185 Query: 193 -NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 + EL+ + E + +Y+ H NHP E + EA L NAG I+++Q+ +L+GIN Sbjct: 186 EDQELLDLISEYSTTEQRIYVMAHINHPNEITPEAKKGFDALHNAGAIVVNQTPVLRGIN 245 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 DDP +L L+ + PYY AG + F L+++E IV K + SGL + Sbjct: 246 DDPVVLGELLDQLSWAGVTPYYFFINRPVAGNNEFVLSLKEAYDIVEEAKARTSGLGKRV 305 Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI--------VHDYPPKSS 352 L + GK++I + +G + H + V D P +S Sbjct: 306 R-LSMSHTSGKIEI-----LAIDDGKAYLKYHQSRDGHYGKFMVLDCPEDAS 351 >gi|255318144|ref|ZP_05359387.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter radioresistens SK82] gi|262378563|ref|ZP_06071720.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164] gi|255304796|gb|EET83970.1| lysine 2,3-aminomutase YodO family protein [Acinetobacter radioresistens SK82] gi|262299848|gb|EEY87760.1| lysine 2,3-aminomutase [Acinetobacter radioresistens SH164] Length = 338 Score = 357 bits (918), Expect = 1e-96, Method: Composition-based stats. Identities = 103/324 (31%), Positives = 163/324 (50%), Gaps = 4/324 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q + +T +L +A + EQ+ S + + + + +P DP+ Sbjct: 11 WQSQLSDLITDPLELLHALQLSPEQLLSGAVLASEKFKLRVPRAFVAKMCIGDPLDPLLL 70 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q +P EL P DP+G+ + L G++H+Y R LL L C V+CR+CFRR Sbjct: 71 QVLPHHLELEDFPGFVTDPLGEEAANLLPGVLHKYKTRFLLTLTGACAVHCRYCFRRHFP 130 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + ++D A YI + ++ E+I +GGDPL LS+++L L+ L I + L Sbjct: 131 YQEN--LPKNEDWPAIKNYILSQPEVHEIILSGGDPLTLSNRKLGLWLERLESIPQIDTL 188 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R HSRVPIV P RI+ ELI L+ + + + +H+NH E + + + LA + +L Sbjct: 189 RIHSRVPIVIPDRIDHELISLLENSRLRIILVVHSNHASELDDFTCSKLHELARRQVTVL 248 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKGIND E+L NL E R+ PYYLH D G HF L + ++ + Sbjct: 249 NQAVLLKGINDSAEVLINLSYRLFEARVMPYYLHVLDKVKGAHHFDLPSSKIDEVYKEVL 308 Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322 + G P + ++ G K + Sbjct: 309 ASLPGYLVPKLVREIAGEKNKTPL 332 >gi|157374957|ref|YP_001473557.1| lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3] gi|157317331|gb|ABV36429.1| Lysine 2,3-aminomutase [Shewanella sediminis HAW-EB3] Length = 397 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 104/343 (30%), Positives = 186/343 (54%), Gaps = 12/343 (3%) Query: 7 TLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + + ++L I + D + + +TP IA L++ + PI Q++P++ Sbjct: 51 SFKTDKELSKVFGNINPVEED----VYKVIATRITPYIAQLMDKDDQACPIRIQYVPEQN 106 Query: 66 ELNILPEEREDPIGDNNHSP-LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E+++ P+E D + +++ P IVHRYP+R+L + ++C YCR C R+ MV S Sbjct: 107 EMDVAPQEMGDQLAEDDMMPDGTSIVHRYPNRVLFLVHNICGAYCRHCTRKRMV-SDPLN 165 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSR 183 V+S + ++ Y++E ++ +V+ +GGDPL+L+ +L +VL +R ++ILR SR Sbjct: 166 VISMERIRKSVEYLREHPEVQDVLLSGGDPLLLTDDKLDQVLSMIREARPDLKILRIGSR 225 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 +P P RI PEL Q L + + + NHP E + + ++ L +GI+L +QSVL Sbjct: 226 LPTQLPTRITPELCQILVKNRVTL-LNTQVNHPKEITPLFVKHMAMLRTSGIMLGNQSVL 284 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 +KG+ND E++ +L+ V I+PYY++ D A G S F+++ + +I ++ +SG Sbjct: 285 IKGVNDSVEVMRDLVMDLVSNGIRPYYVYSMDPAPGNSKFQVSYDRMLEIYHGIRGWVSG 344 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKV---GNGSYCITDHHNI 343 P +I+D GG GK+ + ++K G T+ Sbjct: 345 PAIPTFIVDGIGGLGKMPVQPEYVRKQVIDGETKLLATNFEGR 387 >gi|77359438|ref|YP_339013.1| lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis TAC125] gi|76874349|emb|CAI85570.1| putative lysine 2,3 aminomutase [Pseudoalteromonas haloplanktis TAC125] Length = 308 Score = 357 bits (917), Expect = 1e-96, Method: Composition-based stats. Identities = 87/295 (29%), Positives = 148/295 (50%), Gaps = 3/295 (1%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 + + + + + + + NDP+ Q +P+ +E +DP+ + ++ G+ Sbjct: 14 KARSLFPVRVPIPFIKKMRKGDANDPLLLQVMPRHQEFLTKSGFNKDPLLEQSNQQ-PGL 72 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +H+Y R+L+ C V CR+CFRR + L+ + AL+YI+ + I EVI Sbjct: 73 LHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LNKRSLLDALSYIKSDNNINEVIL 130 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL+ + L L + ++ +R H+R+P+V P RI EL + L + + Sbjct: 131 SGGDPLMAKDDAISWFLDELEQLPQIKRMRIHTRLPVVIPARITDELCERLARSPLKIVF 190 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 H NH E ++ AA+ +L G++L +Q+V+LK +ND NL + + PY Sbjct: 191 VNHINHANEIDDDFKAAMQKLKQVGVVLFNQAVILKDVNDTTAAQVNLSEALFDADVLPY 250 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 YLH D G SHF ++ E+ KI+A L E + G P + ++ G K ID Sbjct: 251 YLHLLDKVEGASHFDISEEQAIKIMAELLEALPGFLVPKLVREIGGEKSKTPIDL 305 >gi|166711823|ref|ZP_02243030.1| hypothetical protein Xoryp_10295 [Xanthomonas oryzae pv. oryzicola BLS256] Length = 342 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 94/323 (29%), Positives = 154/323 (47%), Gaps = 3/323 (0%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + + L + + + + + + + + +DP+ RQ Sbjct: 22 WQQQWRDAVRDPRVLLELLGLNAQAAAISDTAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E+ +P D +GD G++ +Y R LL C V+CR+CFRR Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +++ + A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR Sbjct: 142 AEE--SAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLR 199 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+PIV P+R++ L+ L+ PV +HANH EF A+ L + G LL+ Sbjct: 200 IHSRLPIVLPERVDAPLLAWLRSLPWPVAFVLHANHANEFDSAVDTAMHALRDTGAQLLN 259 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL G+ND + LA L + PYYLH D AG +HF + + + L Sbjct: 260 QAVLLGGVNDSVDALAALSERSFAAGVVPYYLHQLDRVAGVAHFEVDDARARALHTELAT 319 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++SG P + ++PG GK + Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342 >gi|85711842|ref|ZP_01042897.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145] gi|85694239|gb|EAQ32182.1| Probable lysine 2,3-aminomutase [Idiomarina baltica OS145] Length = 340 Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats. Identities = 96/329 (29%), Positives = 159/329 (48%), Gaps = 7/329 (2%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 QL K+ + L + +E E +S + L+ NP DP+ RQ Sbjct: 12 WQLELAKSYKDPRQLLTTLGLDPNAFNEHLEAKKLFSFRVPRPFVELMEAGNPQDPLLRQ 71 Query: 60 FIPQKEELNILPEEREDPIGD----NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 +P +E + P DP+ + H+ +G++H+Y R+LL + C + CR+CFRR Sbjct: 72 VLPLADEFTVTPGYSTDPLNEVTDKREHAVPQGLLHKYASRVLLLVQGACAINCRYCFRR 131 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 + VL K + + Y+++ ++ EVI +GGDPL + L ++ L +K + Sbjct: 132 HYPYADD--VLPRKQFDECVEYVRQNQEVNEVILSGGDPLFANDGYLIELADKLAELKQI 189 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235 + LR HSR+P+V PQR+ L L + + V + IHANH E ++ G+ Sbjct: 190 KRLRIHSRLPVVLPQRLTERLATHLTQRFEQVILVIHANHANEIGSSLKQHLATWRQRGV 249 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 LL+QSVLLK INDD + L+ L + + PYYLH D G +HF ++ +++ Sbjct: 250 TLLNQSVLLKAINDDADSLSQLSERLFDASVLPYYLHQLDPVQGAAHFAISDARARELWQ 309 Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDT 324 + ++ G P + ++P K I Sbjct: 310 QINARLPGFLVPKLVREIPNRDSKTPIMP 338 >gi|15606739|ref|NP_214119.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5] gi|4033496|sp|O67554|Y1632_AQUAE RecName: Full=Uncharacterized KamA family protein aq_1632 gi|2983974|gb|AAC07521.1| hypothetical protein aq_1632 [Aquifex aeolicus VF5] Length = 374 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 110/346 (31%), Positives = 174/346 (50%), Gaps = 34/346 (9%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 +++ ++ +LIN NPNDPI R IP EEL + + D ++ + + G+ Sbjct: 27 KVTEKFAFRTNTYYNSLINWDNPNDPIRRIVIPTTEELEV--WGKLDASNESKYMKVHGL 84 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 H+YPD LL + VC +YCRFCFR+ + + V +D L YI+ +I V+ Sbjct: 85 EHKYPDTALLLVTDVCGIYCRFCFRKRLFMNDNDEVA--RDVSEGLEYIRNHPEINNVLL 142 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP-----ELIQCL-KEA 203 TGGDPLIL+ +L+K+LK L I HV+I+R S++ V+P R+ EL + E Sbjct: 143 TGGDPLILATFKLEKILKALAEIPHVRIVRIGSKMLAVNPFRVLDDPKLLELFEWFNTET 202 Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 GK +Y+ H NHP E ++EA A+ + G L +Q+ +LKGINDD E L L+ Sbjct: 203 GKKLYLMNHFNHPRELTKEARKAVELVQKTGTTLTNQTPILKGINDDFETLKTLLEELSF 262 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-FYILDLPGGYGKVKI 322 + + PYY+ AG + IEE +V +++ ++SGL Y+ + GK++I Sbjct: 263 IGVPPYYVFQCRPTAGNKAYSTPIEETIDLVEAVRAEVSGLAARVRYV--MSHETGKIEI 320 Query: 323 ----------------DTHN-----IKKVGNGSYCITDHHNIVHDY 347 D N + K ++ D+ +V +Y Sbjct: 321 LGKTDEHIFFRYHRAADPENRGKFMVFKRNPEAHWFDDYTELVAEY 366 >gi|325926499|ref|ZP_08187819.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118] gi|325543148|gb|EGD14591.1| L-lysine 2,3-aminomutase [Xanthomonas perforans 91-118] Length = 342 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 95/323 (29%), Positives = 155/323 (47%), Gaps = 3/323 (0%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + + L + + + + + + + + +DP+ RQ Sbjct: 22 WQQQWRDAVRDPRVLLQLLGLDAQAASISAAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E+ +P D +GD G++ +Y R LL C V+CR+CFRR Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +++ + A+ I I EV+ +GGDPL L+ +L ++ L I H++ LR Sbjct: 142 AEE--TAARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAIPHLKRLR 199 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+PIV P+R++ L L+ PV +HANH EF AA+ L + G LL+ Sbjct: 200 IHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRDTGAHLLN 259 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+G+ND + LA L + PYYLH D AG +HF + + + A L Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++SG P + ++PG GK + Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342 >gi|78048134|ref|YP_364309.1| putative radical SAM superfamily protein [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78036564|emb|CAJ24255.1| putative radical SAM superfamily protein [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 342 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 95/323 (29%), Positives = 155/323 (47%), Gaps = 3/323 (0%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + + L + + + + + + + + +DP+ RQ Sbjct: 22 WQQQWRDAVRDPRVLLQLLGLDAQAAAISAAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E+ +P D +GD G++ +Y R LL C V+CR+CFRR Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +++ + A+ I I EV+ +GGDPL L+ +L ++ L I H++ LR Sbjct: 142 AEE--TAARDGWREAVTAIAADPGIEEVLLSGGDPLSLATPKLVELTDALAAIPHLKRLR 199 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+PIV P+R++ L L+ PV +HANH EF AA+ L + G LL+ Sbjct: 200 IHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDPAVDAAVQGLRDTGAHLLN 259 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+G+ND + LA L + PYYLH D AG +HF + + + A L Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++SG P + ++PG GK + Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342 >gi|21243115|ref|NP_642697.1| hypothetical protein XAC2381 [Xanthomonas axonopodis pv. citri str. 306] gi|21108633|gb|AAM37233.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri str. 306] Length = 342 Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats. Identities = 94/323 (29%), Positives = 152/323 (47%), Gaps = 3/323 (0%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + + L + + + + + + + + +DP+ RQ Sbjct: 22 WQQQWRDAVRDPRVLLQLLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E+ P D +GD G++ +Y R LL C +CR+CFRR Sbjct: 82 VLPLDAEMQPAPGFGLDAVGDGAARTAAGVIQKYRGRALLIATGSCAAHCRYCFRRHFPY 141 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +++ + A+A I I EV+ +GGDPL L+ +L ++ L + H++ LR Sbjct: 142 AEE--TAARDGWRDAVAAIAADPSIEEVLLSGGDPLSLATPKLAELTDALAAVPHLKRLR 199 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+PIV P+R++ L L+ PV +HANH EF AA L G LL+ Sbjct: 200 IHSRLPIVLPERVDAPLQAWLRSLPWPVAFVLHANHANEFDSAVDAAAQGLRETGAQLLN 259 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+G+ND + LA L + PYYLH D AG +HF + + + A L Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHAELAA 319 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++SG P + ++PG GK + Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342 >gi|289207649|ref|YP_003459715.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp. K90mix] gi|288943280|gb|ADC70979.1| lysine 2,3-aminomutase YodO family protein [Thioalkalivibrio sp. K90mix] Length = 348 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 107/322 (33%), Positives = 169/322 (52%), Gaps = 3/322 (0%) Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + L + + + + + + + +P DP+ Q Sbjct: 24 WQQALARAIRDPVTLARELELDPAHLPGLHAGHTLFRVRVPRSYLARMRKADPQDPLLLQ 83 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +PQ++E P DP+GD++ G+VH+Y R+LL C V+CR+CFRRE Sbjct: 84 VLPQQQESEEHPGFVADPVGDHDALAAPGLVHKYHGRVLLLTTGACAVHCRYCFRREFPY 143 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 ++ S D A+AYI + I EVI +GGDPL LS +RL +++ L I H++ LR Sbjct: 144 AEH--NASQDDWAPAIAYIHADTSIREVILSGGDPLSLSDRRLADLVRRLEAIPHLERLR 201 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P+R++ +L+ L + + +HANHP EF++ A A++RL GI LL+ Sbjct: 202 IHTRLPVVLPERVDEQLLSWLGKGRLHHVLVLHANHPREFADPAAPALARLQARGITLLN 261 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL GINDDP+ L L + PYYLH D GT+HF +T ++ +L Sbjct: 262 QAVLLAGINDDPDTLCELQEAGFRHGVLPYYLHLLDRTRGTAHFEVTEHRALELHQALHA 321 Query: 300 KISGLCQPFYILDLPGGYGKVK 321 ++ G P + ++PG GK Sbjct: 322 RLPGYLVPRLVREIPGEPGKTP 343 >gi|293609733|ref|ZP_06692035.1| conserved hypothetical protein [Acinetobacter sp. SH024] gi|292828185|gb|EFF86548.1| conserved hypothetical protein [Acinetobacter sp. SH024] Length = 338 Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats. Identities = 99/292 (33%), Positives = 154/292 (52%), Gaps = 2/292 (0%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++ Sbjct: 43 ASEKFKLRVPRAFVGKMNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R LL L C V+CR+CFRR + + ++D YI+ I E+I + Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIEANPNINEIILS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL LS+++L L+ L +K ++ILR HSRVPIV P RI+ +LI LK + + + Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQIEILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H+NH E + + + +L++ I +L+Q+VLLKG+ND + L +L E R+ PYY Sbjct: 221 VHSNHASELDDFTCSKLLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 LH D G HF L + I + + G P + ++ G K + Sbjct: 281 LHVLDKVKGAQHFDLESSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332 >gi|288941476|ref|YP_003443716.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum DSM 180] gi|288896848|gb|ADC62684.1| lysine 2,3-aminomutase YodO family protein [Allochromatium vinosum DSM 180] Length = 335 Score = 355 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 158/319 (49%), Gaps = 2/319 (0%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 R T +L + + +I ++ + + + + +P+DP+ RQ +P Sbjct: 18 RVTAFTQVDELLAFLELDRTRIPDLDAEPESWGLRVPRTFVERMRRGDPDDPLLRQVLPL 77 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 E + DP+GD G++ +Y R LL + C ++CR+CFRR + Sbjct: 78 TAERQQVAGYVTDPVGDACAERAPGLLVKYAGRALLMVTGACAIHCRYCFRRHFPY--QD 135 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 S E AL I + EV+ +GGDPL+L RL +++ L I H+Q LR HSR Sbjct: 136 LGPSQARLERALDEIARDPSLTEVVLSGGDPLMLDDDRLDALIRDLECITHLQRLRLHSR 195 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 VP+V P R+ L L + IHANHP E E +A+ AG+ LL+QSVL Sbjct: 196 VPVVSPSRLTARLAASLTRGRFASTLVIHANHPRELDEVVRSALLDWRAAGVTLLNQSVL 255 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+ND EILA L + PYYLH D AG++HF + E ++++ ++ ++ G Sbjct: 256 LRGVNDRIEILAELSERLFACGVLPYYLHGLDPVAGSAHFEVDDAEARRLLDGVRARLPG 315 Query: 304 LCQPFYILDLPGGYGKVKI 322 P + ++PG + K + Sbjct: 316 YLVPRLVREIPGDHSKRPL 334 >gi|260549729|ref|ZP_05823946.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624] gi|260407246|gb|EEX00722.1| lysine 2,3-aminomutase [Acinetobacter sp. RUH2624] Length = 338 Score = 355 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 103/292 (35%), Positives = 152/292 (52%), Gaps = 2/292 (0%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++ Sbjct: 43 ASEKFKLRVPRAFVGKMNAKNPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R LL L C V+CR+CFRR + + + D YI+ I EVI + Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNDDWLNIKNYIEANPDINEVILS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H+NH E + + + L++ I +L+Q+VLLKG+ND + L +L E R+ PYY Sbjct: 221 VHSNHASELDDFTCSKLMELSSHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 LH D G HF L E I + + G P + ++ G K + Sbjct: 281 LHVLDKVKGAQHFDLMPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|169795200|ref|YP_001712993.1| hypothetical protein ABAYE1057 [Acinetobacter baumannii AYE] gi|184158947|ref|YP_001847286.1| lysine 2,3-aminomutase [Acinetobacter baumannii ACICU] gi|213158137|ref|YP_002320188.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057] gi|215482748|ref|YP_002324946.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB307-0294] gi|301346998|ref|ZP_07227739.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB056] gi|301511118|ref|ZP_07236355.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB058] gi|301596429|ref|ZP_07241437.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB059] gi|332857081|ref|ZP_08436387.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150] gi|332870019|ref|ZP_08438995.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113] gi|332874730|ref|ZP_08442600.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059] gi|169148127|emb|CAM85990.1| conserved hypothetical protein [Acinetobacter baumannii AYE] gi|183210541|gb|ACC57939.1| Lysine 2,3-aminomutase [Acinetobacter baumannii ACICU] gi|193077935|gb|ABO12838.2| putative aminomutase [Acinetobacter baumannii ATCC 17978] gi|213057297|gb|ACJ42199.1| hypothetical protein AB57_2849 [Acinetobacter baumannii AB0057] gi|213987501|gb|ACJ57800.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB307-0294] gi|322508931|gb|ADX04385.1| lysine 2,3-aminomutase [Acinetobacter baumannii 1656-2] gi|323518917|gb|ADX93298.1| lysine 2,3-aminomutase [Acinetobacter baumannii TCDC-AB0715] gi|332726896|gb|EGJ58410.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013150] gi|332732519|gb|EGJ63770.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6013113] gi|332736991|gb|EGJ67948.1| lysine-2,3-aminomutase protein [Acinetobacter baumannii 6014059] Length = 338 Score = 355 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 2/292 (0%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 S + + + +N +P DP+ Q +P EL PE DP+G+ + L G++ Sbjct: 43 ASEKFKLRVPRAFVGKMNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R LL L C V+CR+CFRR + + ++D YI+ I EVI + Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYY Sbjct: 221 VHSNHASELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 LH D G HF L E I + + G P + ++ G K + Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|169632907|ref|YP_001706643.1| hypothetical protein ABSDF1142 [Acinetobacter baumannii SDF] gi|169151699|emb|CAP00492.1| conserved hypothetical protein [Acinetobacter baumannii] Length = 338 Score = 355 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 103/292 (35%), Positives = 153/292 (52%), Gaps = 2/292 (0%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 S + + + +N +P DP+ Q +P EL PE DP+G+ + L G++ Sbjct: 43 ASEKFKLRVPRAFVGKMNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R LL L C V+CR+CFRR + + ++D YI+ I EVI + Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E RI PYY Sbjct: 221 VHSNHASELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARIMPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 LH D G HF L E I + + G P + ++ G K + Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|217077357|ref|YP_002335075.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus TCF52B] gi|217037212|gb|ACJ75734.1| lysine 2,3-aminomutase YodO family protein [Thermosipho africanus TCF52B] Length = 370 Score = 355 bits (913), Expect = 4e-96, Method: Composition-based stats. Identities = 112/371 (30%), Positives = 186/371 (50%), Gaps = 34/371 (9%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 ++ +T + + + +E+ +++K+++ Y LIN +PNDPI IP Sbjct: 1 MQVNYITKIEKVPQ---LSEEEKNKLKKVTEKYKFRANDYYLKLINWDDPNDPIRNLIIP 57 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 Q EL R D + +++ KG+ H+Y D LL + VC +CRFCFR+ + + Sbjct: 58 QIGELEE--WGRLDASNEKSYTISKGLQHKYRDTALLLVNDVCGGFCRFCFRKRLFINVG 115 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 V+ +D L YI++ +I V+ TGGDPL+L+ K+L+K++ +R I HVQI+R S Sbjct: 116 EEVV--RDVSEDLEYIKKHKEITNVLLTGGDPLLLATKKLEKIISQIREIDHVQIIRIGS 173 Query: 183 RVPIVDPQRIN--PELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 ++ +P RI PELI+ +K+ K +YI NHP E ++EAI A++ L AG IL Sbjct: 174 KMVAFNPYRITEDPELIELIKKYSTDEKKIYIMTQFNHPREITKEAIKAVNMLQKAGAIL 233 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 +Q+ L+KG+N D + L L + + + PYY+ AG F + +EE +I Sbjct: 234 ANQTPLIKGVNADWKTLMELFKKLSFIGVPPYYVFQGRPVAGNKPFAVPVEEAYQIFLKA 293 Query: 298 KEKISGLCQPFYILDLPGGYGKVKI----------------DTHN-----IKKVGNGSYC 336 +SGL + + GK+++ D N + K +Y Sbjct: 294 IMNVSGLAKRARFA-MSHETGKIEVSALTKEHVIFRYQRAHDPKNAGKIMVYKRNPNAYW 352 Query: 337 ITDHHNIVHDY 347 D+ +V +Y Sbjct: 353 FDDYTELVEEY 363 >gi|90407173|ref|ZP_01215361.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3] gi|90311749|gb|EAS39846.1| Probable lysine 2,3-aminomutase [Psychromonas sp. CNPT3] Length = 338 Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats. Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 3/318 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + + Q L + E + ++ + + + + NDP+ RQ +P +E Sbjct: 23 AIKNPQQLLELLDLNPEMFALSEPARKNFPMLVPLPFIKKMKKGDINDPLLRQVLPITDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + DP+ ++++S ++G++H+Y RILL L C V CR+CFRR + L Sbjct: 83 DKQVEGYSIDPLLEHDNS-IQGVLHKYKSRILLVLKSGCAVNCRYCFRRHFPY--QDNNL 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + K + Y++ + EVI +GGDPL+ L V+ L+ +K ++ LR H+R+P+ Sbjct: 140 NKKQLAEVILYLKAHPDVNEVILSGGDPLMSKDDFLDYVINELQQLKQLKRLRIHTRLPV 199 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V PQR+ L + LK V +H NH +E + A+ +L +AGI LL+QSVLL+G Sbjct: 200 VIPQRVTDRLCEILKATRLQVVFVVHINHAHEIDKAFKIAMLKLHHAGIQLLNQSVLLRG 259 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +ND+ E L L + I PYYL D G HF L ++ + ++ + + G Sbjct: 260 VNDNAEALVALSEALFDAHILPYYLFLLDKVQGAQHFDLEEQKAKALLLEISAALPGYLV 319 Query: 307 PFYILDLPGGYGKVKIDT 324 P ++ G K I Sbjct: 320 PRLSREIAGEKSKTLITP 337 >gi|260556680|ref|ZP_05828898.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606] gi|260409939|gb|EEX03239.1| lysine 2,3-aminomutase [Acinetobacter baumannii ATCC 19606] Length = 338 Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats. Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 2/292 (0%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 S + + + +N +P DP+ Q +P EL PE DP+G+ + L G++ Sbjct: 43 ASEKFKLRVPRAFVGKMNVKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R LL L C V+CR+CFRR + + ++D YI+ I EVI + Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYY Sbjct: 221 VHSNHASELDDFTCSKLLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 LH D G HF L E I + + G P + ++ G K + Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|239501163|ref|ZP_04660473.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter baumannii AB900] Length = 338 Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats. Identities = 102/292 (34%), Positives = 153/292 (52%), Gaps = 2/292 (0%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 S + + + +N +P DP+ Q +P EL PE DP+G+ + L G++ Sbjct: 43 ASEKFKLRVPRAFVGKMNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R LL L C V+CR+CFRR + + ++D YI+ I EVI + Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL LS+++L L+ L +K V+ILR HSRVPIV P RI+ ELI LK + + + Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYY Sbjct: 221 VHSNHASELDDFTCSKLLQLSGHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 LH D G HF L E I + + G P + ++ G K + Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|160901658|ref|YP_001567239.1| lysine 2,3-aminomutase [Petrotoga mobilis SJ95] gi|160359302|gb|ABX30916.1| Lysine 2,3-aminomutase [Petrotoga mobilis SJ95] Length = 370 Score = 355 bits (911), Expect = 8e-96, Method: Composition-based stats. Identities = 104/364 (28%), Positives = 180/364 (49%), Gaps = 31/364 (8%) Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70 L I +E++ E++ + Y +LIN + NDPI + IP EEL Sbjct: 6 VTKLEKVKGISQEELKELQPVEEKYKFRANEYYLDLINWKDKNDPIRKIIIPSVEELEE- 64 Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 ED +++++ KG+ H+Y D LL + VC +CRFCFR+ + + V+ +++ Sbjct: 65 -WGLEDASREHSYTISKGLQHKYRDTALLLVNDVCGSFCRFCFRKRLFKNVGKEVVRTRE 123 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + L YI++ +I V+ TGGDPL+LS +L+ +++++ I H++I+R ++ P +P Sbjct: 124 IDKDLDYIRKHEEITNVLLTGGDPLLLSTNKLKSIIESINEIDHIKIIRIGTKTPAFNPF 183 Query: 191 RI--NPELIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 RI + L +K+ +GK +Y +H NHP E + +I I+ L N+G I+ +Q+ LL Sbjct: 184 RIISDDALSNLIKKITNSGKKLYFIVHFNHPRELTSASIQGINILQNSGAIIANQTPLLH 243 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GIND+P+ L+ L + I PYY+ G F + +E+ I E ISGL Sbjct: 244 GINDNPKTLSTLFKKLSFNGIPPYYVFQNRPVMGNKGFTIPLEKAYSIFLESLEDISGLA 303 Query: 306 -QPFYILDLPGGYGKVKIDT---------------------HNIKKVGNGSYCITDHHNI 343 +P ++ + GK+++ + K +Y D+ + Sbjct: 304 KRPRFV--MSHESGKIEVAALTSKNIIFRYHRSHNLDNYGKFFVFKRNPQAYWFDDYKEL 361 Query: 344 VHDY 347 V Y Sbjct: 362 VEIY 365 >gi|15839064|ref|NP_299752.1| hypothetical protein XF2474 [Xylella fastidiosa 9a5c] gi|9107671|gb|AAF85272.1|AE004055_10 conserved hypothetical protein [Xylella fastidiosa 9a5c] Length = 357 Score = 354 bits (910), Expect = 9e-96, Method: Composition-based stats. Identities = 100/321 (31%), Positives = 161/321 (50%), Gaps = 2/321 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q+ + + ++L + + + + + + + + + +DP+ RQ + Sbjct: 39 QVWREAIRDPRELLALLRLDPTSVGISEAAAAQFPLRVPRGFVARMRVGDLHDPLLRQVL 98 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E + + D +GD GI+ +Y RILL C V+CR+CFRR ++ Sbjct: 99 PMDAEEDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 158 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 S A A+++ I EVI +GGDPL LS +L ++ LR I H++ LR H Sbjct: 159 D--TASHDRWREAAAFVRADPLIEEVILSGGDPLSLSTAKLVELTDALRSIPHLKRLRIH 216 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P+RI+ L++ L PV IHANH EF AA++ L G LL+Q+ Sbjct: 217 SRLPVVLPERIDTPLLEWLGALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 276 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+ND+ LA L + PYYLH D AGT+H+ + + + A L ++ Sbjct: 277 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARALHAELVARL 336 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 SG P ++ ++PG K + Sbjct: 337 SGYLVPRFVREVPGDSSKRPL 357 >gi|126179733|ref|YP_001047698.1| lysine 2,3-aminomutase YodO family protein [Methanoculleus marisnigri JR1] gi|125862527|gb|ABN57716.1| L-lysine 2,3-aminomutase [Methanoculleus marisnigri JR1] Length = 386 Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats. Identities = 102/359 (28%), Positives = 176/359 (49%), Gaps = 29/359 (8%) Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNIL 70 L + I E+ + E+++ ++ +LI+ +P DPI R +P EEL Sbjct: 20 VSSLDSVPGIDPEERARLAEVTDLFAFRANDYYLSLIDWDDPADPIRRLIVPTVEELE-- 77 Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 P DP ++ ++ G+ H+Y + LL + +C CR+CFR+ + + V +KD Sbjct: 78 PWGHLDPSSEHRYTRAPGLQHKYRETALLLVSDLCGGLCRYCFRKRLFIEEAREV--NKD 135 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 A LAYI++ +I V+ TGGDPL L R+ +++ +R I+HV I+R +++P +P Sbjct: 136 ISAGLAYIRDHPEITNVLLTGGDPLFLETGRVLDIVRQVREIEHVGIIRIGTKMPAYNPF 195 Query: 191 RI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 RI +P L+ +++ K +YI NHP E ++ A A++ L AG ++++Q+ L++ Sbjct: 196 RIINDPALLDMIRDYSMDEKRIYIMAQFNHPRELTDAACRAVALLQEAGAVVMNQTPLIR 255 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GINDDPE+LA L + PYY+ A G F + +EE +I + SGL Sbjct: 256 GINDDPEVLAALFDKLSFIGANPYYVFQCRPAIGNRTFAVPVEESYRIFEQARSICSGLA 315 Query: 306 QP-FYILDLPGGY----GKV---------------KIDTHNIKKVGNGSYCITDHHNIV 344 + +++ G GK + + K +Y D+ +V Sbjct: 316 KRARFVISHATGKIEVLGKTDRYTYFKYNQATNPEDLGRFMVYKSNPEAYWFDDYTELV 374 >gi|160872273|ref|ZP_02062405.1| radical SAM domain protein [Rickettsiella grylli] gi|159121072|gb|EDP46410.1| radical SAM domain protein [Rickettsiella grylli] Length = 328 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 99/322 (30%), Positives = 162/322 (50%), Gaps = 3/322 (0%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + +L + + + + + S + + + + + NP DP+ +Q Sbjct: 5 WQTFLKEAVADPAELLDRLALNPQLLSAAQHASRLFPLRVPSGFIDRMQKGNPADPLLQQ 64 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E I + +DP+ +N +PL G++H+Y RILL + C + CR+CFRR Sbjct: 65 VLPIAAEARIQADFSDDPLQENAANPLPGLLHKYYGRILLTMTGACAINCRYCFRRHFPY 124 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + K A +AYIQ + I EVI +GGDPL+ L+ + L I HV+I+R Sbjct: 125 GKN--KVGGKAWHAIVAYIQADTSIREVILSGGDPLLAQDDYLKHRINDLAAIPHVKIVR 182 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+PIV P+R+ L+ L + H NH E ++ AI + I +L+ Sbjct: 183 IHSRLPIVIPERMTTPLLNALTGTRLQPVLVTHCNHANELNDSVQQAIEKCRQRKIHVLN 242 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLLKG+ND E L +L E I PYYLH D G +HF + E+ + ++ +L+E Sbjct: 243 QAVLLKGVNDSVEALVHLSERLFECGILPYYLHRLDKVQGATHFTVNEEKMKPLLKALRE 302 Query: 300 KISGLCQPFYILDLPGGYGKVK 321 ++ G P + + G K+ Sbjct: 303 RLPGYLVPKCVYEQAGALSKMP 324 >gi|84624209|ref|YP_451581.1| hypothetical protein XOO_2552 [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|84368149|dbj|BAE69307.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF 311018] Length = 342 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 93/323 (28%), Positives = 153/323 (47%), Gaps = 3/323 (0%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + + L + + + + + + + + +DP+ RQ Sbjct: 22 WQQQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E+ +P D +GD G++ +Y R LL C V+CR+CFRR Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +++ + A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR Sbjct: 142 AEE--TAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLR 199 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+PIV P+R++ L+ L+ P +HANH EF A+ L + G LL+ Sbjct: 200 IHSRLPIVLPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRDTGAQLLN 259 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL G+ND + LA L + PYYLH D AG +HF + + + L Sbjct: 260 QAVLLGGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHTELAT 319 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++SG P + ++PG GK + Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342 >gi|208779105|ref|ZP_03246451.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida FTG] gi|208744905|gb|EDZ91203.1| lysine 2,3-aminomutase YodO family protein [Francisella novicida FTG] Length = 328 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 163/319 (51%), Gaps = 4/319 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + +S +L I E+ + + + + A+ + N NDP+ +Q +P +E Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNTAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K + Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+ Sbjct: 131 GRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQQIPHIKRLRIHSRIPV 190 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+R+ +L++ L E + IH NHP E + + + GII L+QS LLK Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDDNVSKVLKEIHKHGIITLNQSTLLKD 250 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD +L L + ++ PYY+H D +GT H+ + + + I+ L E SG Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMV 308 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++PG K + H Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327 >gi|254372685|ref|ZP_04988174.1| hypothetical protein FTCG_00250 [Francisella tularensis subsp. novicida GA99-3549] gi|151570412|gb|EDN36066.1| hypothetical protein FTCG_00250 [Francisella novicida GA99-3549] Length = 328 Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 163/319 (51%), Gaps = 4/319 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + +S +L I E+ + + + + A+ + N NDP+ +Q +P +E Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNTAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K + Sbjct: 73 EVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+ Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRIAHIKRLRIHSRIPV 190 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD +L L + ++ PYY+H D +GT H+ + + + I+ L E SG Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMV 308 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++PG K + H Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327 >gi|254283526|ref|ZP_04958494.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium NOR51-B] gi|219679729|gb|EED36078.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium NOR51-B] Length = 356 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 101/335 (30%), Positives = 159/335 (47%), Gaps = 12/335 (3%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQID---------EIKEISNHYSIALTPVIANLINPHNP 52 QLR+ + S L ++ + ++ + + + + + + + P +P Sbjct: 23 QLRN-AVRSVSALLDSLNLTPADVEHGEPKTRGEDAERAAQDFPVRAPQSFIDRMRPGDP 81 Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 NDP+ RQ + E +P EDP+ + + +P GIVH+Y R+LL C V+CR+C Sbjct: 82 NDPLLRQVLAVSAEQQHVPGYVEDPLQERDANPTPGIVHKYQGRLLLMPTAACAVHCRYC 141 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 FRR + L + A+ Y+ + ++ EVI +GGDPLIL L +++ L + Sbjct: 142 FRRHFPYA--DNRLDEGALDRAMDYLASQPEVTEVILSGGDPLILDDAALGRLIDRLESL 199 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 H+ LR HSR+P+V P R+ L + L + + +H NHP E + R Sbjct: 200 GHLSRLRIHSRLPVVLPDRLTEALAERLDASRLSTSLVLHGNHPAEIDAGLTERLQRWRP 259 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 A + LL+QSVLL G+NDDP +L L E + PYYLH D AG HF + E+ Sbjct: 260 ASLTLLNQSVLLAGVNDDPAVLIALSERLFEAGVLPYYLHLLDPVAGVGHFAVADEQALA 319 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327 I + K+ G P +LP K + Sbjct: 320 IYRQMAAKLPGYLLPKLARELPDLPSKTTYGLDTL 354 >gi|28199372|ref|NP_779686.1| hypothetical protein PD1491 [Xylella fastidiosa Temecula1] gi|182682099|ref|YP_001830259.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23] gi|28057478|gb|AAO29335.1| conserved hypothetical protein [Xylella fastidiosa Temecula1] gi|182632209|gb|ACB92985.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa M23] gi|307578366|gb|ADN62335.1| lysine 2,3-aminomutase YodO family protein [Xylella fastidiosa subsp. fastidiosa GB514] Length = 342 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 99/321 (30%), Positives = 160/321 (49%), Gaps = 2/321 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q+ + + ++L + + + + + + + + + +DP+ RQ + Sbjct: 24 QVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVTRMRVGDLHDPLLRQVL 83 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E + + D +GD GI+ +Y RILL C V+CR+CFRR ++ Sbjct: 84 PMDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 143 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 S A A+++ I EVI +GGDPL LS +L ++ LR H++ LR H Sbjct: 144 D--TASHDRWREAAAFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGTPHLKRLRIH 201 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P+RI+ L++ L PV IHANH EF AA++ L G LL+Q+ Sbjct: 202 SRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 261 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+ND+ LA L + PYYLH D AGT+H+ + + + A L ++ Sbjct: 262 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVARL 321 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 SG P ++ ++PG K + Sbjct: 322 SGYLVPRFVREVPGDSSKRPL 342 >gi|308048933|ref|YP_003912499.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica DSM 9799] gi|307631123|gb|ADN75425.1| lysine 2,3-aminomutase YodO family protein [Ferrimonas balearica DSM 9799] Length = 400 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 99/320 (30%), Positives = 178/320 (55%), Gaps = 7/320 (2%) Query: 29 KEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPL-K 87 ++ + +TP +A L++ ++PN PI Q++P+++E++I P E D + +++ P Sbjct: 75 DDVYKVIAARITPYVAQLMDKNDPNCPIRIQYVPEQDEMHIAPHEMGDQLAEDDMMPEGT 134 Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 +VHRYP+R+L + ++C YCR C R+ MV S V+ ++ Y+++ ++ +V Sbjct: 135 SLVHRYPNRVLFLVHNICGAYCRHCTRKRMV-SDPLNVIDMARIRRSVEYLRDHPEVQDV 193 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 + +GGDPL+L+ +L ++L +R ++ILR SR+ P R+ PEL+ L + Sbjct: 194 LLSGGDPLLLTDSKLDEILSMIREARPDLKILRIGSRLLAQLPTRVTPELVDVLVKNRVT 253 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 + I NHP E + I + L AG++L +QSV++KG+NDD E++ +L+ V I Sbjct: 254 L-INTQVNHPREITPLFIKHTTMLRRAGVMLGNQSVMIKGVNDDVEVMRDLVMDLVSNGI 312 Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 +PYY++ D A G S F ++ + +I ++ +SG P +I+D GG GK+ + Sbjct: 313 RPYYVYSMDPAPGNSKFMVSYDRMLEIYHGIRGWVSGPAIPTFIVDGIGGLGKMPVQPEY 372 Query: 327 IKKV---GNGSYCITDHHNI 343 +KK G T+ Sbjct: 373 VKKTVQDGETKLIATNFEGR 392 >gi|242280374|ref|YP_002992503.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio salexigens DSM 2638] gi|242123268|gb|ACS80964.1| lysine 2,3-aminomutase YodO family protein [Desulfovibrio salexigens DSM 2638] Length = 353 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 113/355 (31%), Positives = 177/355 (49%), Gaps = 20/355 (5%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q+++ + + + L + ++ + I ++ TP +A+L++ +PN PI Q I Sbjct: 7 QMKN-MVDNLERLKQYINVTPDEEEAINTLNTK--WGTTPHMASLMDKDDPNCPIRMQAI 63 Query: 62 PQKEELNILPEEREDPI------GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 P +E E D D I +Y DRI + +C YCR CFR+ Sbjct: 64 PSLKETKN--EFGLDNYLVWKENRDTEEKRPDCIARQYVDRIAFTVTDICANYCRHCFRK 121 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 E+V + + D E + +I+E +I +V+ TGGDPL+LS R+ +LK+LR I HV Sbjct: 122 ELVVDKNLEL--RFDLEEGIDWIREHEEIRDVLVTGGDPLLLSDDRIDHLLKSLRSIDHV 179 Query: 176 QILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 +++RF SRVPI PQRI PEL++ L + PV++ NHP E + A+ L AG Sbjct: 180 EMIRFGSRVPIAMPQRITPELLEVLGGDHEVPVWLNTQCNHPKELTPRTRKAVYDLLTAG 239 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 + + +Q VLLKGINDD E +L + ++ RI+PYY+ + + A G HFR + I Sbjct: 240 VNVGNQMVLLKGINDDVETFRHLHQKLLQYRIRPYYVFYCEPAPGIDHFRT---RAELIR 296 Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI-KKVGNGSYCITDHHNIVHDYP 348 L+ +GL QP Y+ GK+ + + Y +H P Sbjct: 297 DGLRGHTTGLAQPMYVC--ATNIGKIPLMPDYYCVDKNDKEYTFRNHRWQTTTMP 349 >gi|56707865|ref|YP_169761.1| hypothetical protein FTT_0750 [Francisella tularensis subsp. tularensis SCHU S4] gi|110670336|ref|YP_666893.1| hypothetical protein FTF0750 [Francisella tularensis subsp. tularensis FSC198] gi|134301708|ref|YP_001121676.1| hypothetical protein FTW_0659 [Francisella tularensis subsp. tularensis WY96-3418] gi|224456943|ref|ZP_03665416.1| hypothetical protein FtultM_04156 [Francisella tularensis subsp. tularensis MA00-2987] gi|254370360|ref|ZP_04986365.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254874680|ref|ZP_05247390.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|56604357|emb|CAG45383.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis SCHU S4] gi|110320669|emb|CAL08766.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC198] gi|134049485|gb|ABO46556.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella tularensis subsp. tularensis WY96-3418] gi|151568603|gb|EDN34257.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis FSC033] gi|254840679|gb|EET19115.1| conserved hypothetical protein [Francisella tularensis subsp. tularensis MA00-2987] gi|282159045|gb|ADA78436.1| putative lysine 2,3-aminomutase, YodO family protein [Francisella tularensis subsp. tularensis NE061598] Length = 328 Score = 353 bits (907), Expect = 2e-95, Method: Composition-based stats. Identities = 101/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K + Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+ Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+RI +L++ L E + IH NHP E + + GII+L+QS LLK Sbjct: 191 VLPERITTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++PG K + H Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327 >gi|262372891|ref|ZP_06066170.1| lysine 2,3-aminomutase [Acinetobacter junii SH205] gi|262312916|gb|EEY94001.1| lysine 2,3-aminomutase [Acinetobacter junii SH205] Length = 338 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 106/324 (32%), Positives = 165/324 (50%), Gaps = 4/324 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQI-DEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q + +T +L N + EQ+ S + + + ++ +P DP+ Sbjct: 11 WQSQLSDLITDPLELLNLLELSTEQLLSGAIFASEQFKLRVPRAFVGKMSIGDPFDPLLL 70 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q +P EL PE DP+G+ + + G++H+Y R LL L C ++CR+CFRR Sbjct: 71 QVLPHHLELEDHPEFVTDPLGEEAANQMAGVLHKYQSRFLLTLTGACAIHCRYCFRRHFP 130 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + + D YI++ QI EVI +GGDPL LS+++L L+ L + ++IL Sbjct: 131 YQEN--LPKNDDWINIKQYIEQNPQINEVILSGGDPLTLSNRKLSLWLERLASLPQIKIL 188 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R HSRVP+V P RI+ ELI LK + + + IH+NH E + + + +L+ I +L Sbjct: 189 RIHSRVPVVIPNRIDEELISILKNSRLRIVVVIHSNHAAELDDFTCSKLLQLSEHHITVL 248 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLLKG+ND EIL NL + R+ PYYLH D G HF L E I + Sbjct: 249 NQAVLLKGVNDSAEILNNLSLRLFDARVMPYYLHVLDKVKGAQHFDLRSSEIDHIYTDVL 308 Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322 + G P + ++ G K + Sbjct: 309 ASLPGYLVPKLVREIAGEKNKTPL 332 >gi|317129675|ref|YP_004095957.1| lysine 2,3-aminomutase YodO family protein [Bacillus cellulosilyticus DSM 2522] gi|315474623|gb|ADU31226.1| lysine 2,3-aminomutase YodO family protein [Bacillus cellulosilyticus DSM 2522] Length = 388 Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats. Identities = 115/339 (33%), Positives = 179/339 (52%), Gaps = 15/339 (4%) Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEE 73 + I +E+ ++K+I+ + + NLI+ +NPNDPI + IP + EL Sbjct: 10 IDKITQIPEEERAKLKKITEKFVFRVNDYYLNLIDWNNPNDPIKKLIIPNEGELEE--YG 67 Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 R D ++ + G H+Y LL + VC YCR+CFR+ + + + D + Sbjct: 68 RWDASDEDTNYAAPGCQHKYGTTALLIVSEVCGAYCRYCFRKRLF--RNDIKEAMADVQP 125 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI- 192 + YI+ QI V+ TGGD LIL+ K+L+ +++ LR I HV+I+R S++P+ +P RI Sbjct: 126 GIEYIKNNPQINNVLLTGGDSLILATKKLRLIIEQLREIPHVKIIRLGSKMPVFNPMRIY 185 Query: 193 -NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 + EL+ +KE P +Y+ H NHP E +EEA L NAG I+++Q+ +LKGIN Sbjct: 186 EDQELLDLIKEYSTPEQRIYVMAHINHPVEITEEAKKGFDALHNAGAIVVNQTPVLKGIN 245 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 DDPE+LA L+ + PYY AG + F LT+EE V + K K SGL + Sbjct: 246 DDPEVLAELLDKLSWAGVTPYYFFINRPVAGNNDFVLTLEEAYNAVEAAKAKTSGLGKRV 305 Query: 309 YILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 L + GK+++ + NG + H + DY Sbjct: 306 R-LSMSHTSGKIEV-----LAIDNGKAYLKYHQSRDGDY 338 >gi|325921161|ref|ZP_08183030.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865] gi|325548355|gb|EGD19340.1| L-lysine 2,3-aminomutase [Xanthomonas gardneri ATCC 19865] Length = 342 Score = 352 bits (905), Expect = 4e-95, Method: Composition-based stats. Identities = 95/323 (29%), Positives = 158/323 (48%), Gaps = 3/323 (0%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + ++L + E + + + + + + +DP+ RQ Sbjct: 22 WQQQWRDAVRDPRELLALLGLDAAAAGISAEAAAQFPLRVPRAFVARMRRGDLHDPLLRQ 81 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E+ ++P D +GD G++ +Y R LL C V+CR+CFRR Sbjct: 82 VLPLDAEMRLVPGFGLDAVGDGAAKIADGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +++ + A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR Sbjct: 142 AEE--TAARDGWREAVAAIAADPGIDEVLLSGGDPLSLATSKLAELTDALAAIGHIKRLR 199 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+P+V P+R++ L+ L+ PV IHANH EF AA+ + + G LL+ Sbjct: 200 IHSRLPVVLPERVDAPLLAWLRSLPWPVAFVIHANHANEFDSTVDAAMRAMRDTGAQLLN 259 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+G+ND + LA L + PYYLH D AG +HF + + + L Sbjct: 260 QAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDAHARALHTELAT 319 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++SG P + ++PG GK + Sbjct: 320 RLSGYLVPRLVREIPGDTGKRPL 342 >gi|299769252|ref|YP_003731278.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1] gi|298699340|gb|ADI89905.1| L-lysine 2,3-aminomutase(KAM) (LAM) [Acinetobacter sp. DR1] Length = 338 Score = 352 bits (905), Expect = 4e-95, Method: Composition-based stats. Identities = 101/292 (34%), Positives = 152/292 (52%), Gaps = 2/292 (0%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++ Sbjct: 43 ASEQFKLRVPRAFVGKMNAKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R LL L C V+CR+CFRR + + + D YI+ I E+I + Sbjct: 103 HKYKSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNDDWLNIKNYIEANPHINEIILS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL LS+++L L+ L +K ++ILR HSRVPIV P RI+ ELI LK + + + Sbjct: 161 GGDPLTLSNRKLALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIVLV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYY Sbjct: 221 VHSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 LH D G HF L E I + + G P + ++ G K + Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332 >gi|254369527|ref|ZP_04985538.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] gi|157122481|gb|EDO66616.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica FSC022] Length = 328 Score = 352 bits (905), Expect = 4e-95, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K + Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+ Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+R+ +L++ L E + +H NHP E + + GII+L+QS LLK Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVVHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++PG K + H Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327 >gi|315125467|ref|YP_004067470.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913] gi|315013980|gb|ADT67318.1| lysine 2,3 aminomutase [Pseudoalteromonas sp. SM9913] Length = 308 Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 90/295 (30%), Positives = 147/295 (49%), Gaps = 3/295 (1%) Query: 30 EISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGI 89 + + + + + I + NDP+ Q +P+ +E +DP+ + +++ G+ Sbjct: 14 KARSLFPVRVPLPFIKKIRHGDANDPLLLQVMPRHQEFLTKSGFNKDPLLEQDNNQ-PGL 72 Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +H+Y R+L+ C V CR+CFRR + L+ + AL+YIQ I EVI Sbjct: 73 LHKYKSRVLVMFKTGCAVNCRYCFRRHFPYQENQ--LNKRSLIDALSYIQADKNINEVIL 130 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDPL+ + L L I ++ +R HSR+P+V P RI +L + L ++ V Sbjct: 131 SGGDPLMAKDDAISWFLDELEQIPQIKRMRIHSRLPVVIPARITEQLCERLAKSPLKVIF 190 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 H NH E + A++ L A ++LL+Q+V+LK +ND + NL + + PY Sbjct: 191 VNHINHANEIDSDFKNAMNMLKQANVLLLNQAVILKDVNDTVDAQINLSEALFDTDVMPY 250 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 YLH D G SHF + + KI+A L E + G P + ++ G K ID Sbjct: 251 YLHLLDKVEGASHFDIDEAQAIKIMAELLEALPGFLVPKLVREIGGQKSKTPIDL 305 >gi|258545639|ref|ZP_05705873.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826] gi|258519106|gb|EEV87965.1| L-lysine 2,3-aminomutase [Cardiobacterium hominis ATCC 15826] Length = 326 Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats. Identities = 133/314 (42%), Positives = 199/314 (63%), Gaps = 5/314 (1%) Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69 + ++L + + + Y A++ ++ ++ P+DPIA QFIP EL I Sbjct: 2 TPEELARRANLTPATLHRL---LAEYQYAMSDEMSAAMH-DAPDDPIAAQFIPDARELTI 57 Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 E DPIGD HSPL +VHRYP+R+L K+ +C VYCRFCFR+E +G +G L Sbjct: 58 AASELADPIGDAPHSPLPSLVHRYPNRVLWKISPICAVYCRFCFRKEHIGR-RGQALRQS 116 Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 + A AY+ QI E+I +GGDPL LS+K+L++ L +R + H++ LR HSR+P+V P Sbjct: 117 EIAAVSAYLAANPQIEEIILSGGDPLTLSNKKLRQNLAIIRDLPHIRRLRIHSRIPVVQP 176 Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 RI+ L+ L E + ++ +H NH E + A AA+ RL +G++L SQ+VLLKG+N Sbjct: 177 ARIDHALLDLLGEQPQSTHLVVHTNHSAELTPNARAALHRLRTSGVMLYSQTVLLKGVNA 236 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309 D LANLM ++ +KPYYLHH DLA GT H+R+++ EG+ IVA+L+ ++SG+ P Y Sbjct: 237 DAATLANLMNDLLDCGVKPYYLHHLDLARGTGHYRVSLNEGRAIVAALRRRLSGIAMPTY 296 Query: 310 ILDLPGGYGKVKID 323 I+++PGG GK+ + Sbjct: 297 IVEIPGGDGKIPVG 310 >gi|297620566|ref|YP_003708703.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044] gi|297375867|gb|ADI37697.1| Lysine 2,3-aminomutase [Waddlia chondrophila WSU 86-1044] Length = 327 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 104/322 (32%), Positives = 169/322 (52%), Gaps = 6/322 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q++ + T+ + L + + + EI + + + + L +A I N NDPI RQF+ Sbjct: 12 QIQRQNFTNWEKLADFLELDEFHRQEIMK-NPRFVLNLPIRLAKKIEKGNLNDPILRQFL 70 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E+ DP+GD+ ++H+Y R+LL C ++CR+CFR+ Sbjct: 71 PMVAEMVETAGFVSDPVGDHACRKASKLLHKYNGRVLLVSTSACAMHCRYCFRQNFDYEV 130 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + + L I + I EVI +GGDPL LS++ L +L+ + I H+ LRFH Sbjct: 131 EDKTF-----DEELEVISKDETIKEVILSGGDPLSLSNRHLGALLEKISAIPHINRLRFH 185 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR PI P+RI+ E ++ + V+ IH NHP E ++ ++ L G+ +L+Q+ Sbjct: 186 SRFPIGIPERIDDEFLEAVDRLPHQVWFVIHCNHPRELDKDIFDRLNTLRKLGVNILNQA 245 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+NDD + LA L T + I PYYLH D G SHF ++ EEG +++ L ++ Sbjct: 246 VLLRGVNDDADTLAELCETLSDHGIFPYYLHQLDRVQGASHFEVSKEEGLQLIDQLTRRL 305 Query: 302 SGLCQPFYILDLPGGYGKVKID 323 G P Y+ ++ G K ++ Sbjct: 306 PGYAVPKYVQEIAGEPSKTPLN 327 >gi|224370018|ref|YP_002604182.1| YodO [Desulfobacterium autotrophicum HRM2] gi|223692735|gb|ACN16018.1| YodO [Desulfobacterium autotrophicum HRM2] Length = 359 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 102/348 (29%), Positives = 175/348 (50%), Gaps = 13/348 (3%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + + + L E++ I + TP A L++P +P P+ RQ IP +EL Sbjct: 12 INTPEKLRRIINPTPEELKAINTLDT--RWGTTPYFAALMDPDDPCCPVRRQIIPSLKEL 69 Query: 68 NILPEEREDPIGDNNHSPLK----GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 + + N + I +Y DR+ + C YCR CFRRE+V Q+ Sbjct: 70 ENTYGIKNYLMFHENRTVDPERPDCIARQYQDRVAFTVTDTCASYCRHCFRREVVVDQRL 129 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 + D + + +I++ +I +V+ TGGDP +LS + L ++ LR I HV+++RF +R Sbjct: 130 KL--RFDLDQGIKWIKKNKEIKDVLVTGGDPFLLSDQLLGDLITQLRQIDHVRMIRFGTR 187 Query: 184 VPIVDPQRINPELIQCLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 I PQRI +L++ L + P++I NHP E +++ A+ L G+ + +Q+V Sbjct: 188 TIINLPQRITQDLMEILGDFHRVPIWINTQCNHPKEITDKTARAVFDLLRCGVNVGNQAV 247 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA-SLKEKI 301 LLKGINDD + L + V RI+PYYL + + A G HFR +E+G +++ L+ Sbjct: 248 LLKGINDDVDTFRELHQKLVYTRIRPYYLFYCEAAPGIDHFRTGVEKGSQLIRDGLQGHT 307 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH-NIKKVGNGSYCITDHHNIVHDYP 348 +GL +P Y+ + GK+ + + + + Y + ++ P Sbjct: 308 TGLARPTYV--IATNIGKIPLMGNDYMIEKTEKEYRLRNYLGEETILP 353 >gi|187931527|ref|YP_001891511.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147] gi|187712436|gb|ACD30733.1| aminomutase [Francisella tularensis subsp. mediasiatica FSC147] Length = 328 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E Sbjct: 13 SFSSPLELLEFLEIDNEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K + Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+ Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++PG K + H Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327 >gi|57340042|gb|AAW50008.1| hypothetical protein FTT0750 [synthetic construct] Length = 363 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 101/322 (31%), Positives = 165/322 (51%), Gaps = 4/322 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E Sbjct: 39 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 98 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K + Sbjct: 99 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 156 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+ Sbjct: 157 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 216 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+RI +L++ L E + IH NHP E + + GII+L+QS LLK Sbjct: 217 VLPERITTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 276 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG Sbjct: 277 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 334 Query: 307 PFYILDLPGGYGKVKIDTHNIK 328 P ++PG K + H+ Sbjct: 335 PVLTKEIPGYPSKKWLSFHSYP 356 >gi|284162142|ref|YP_003400765.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus DSM 5631] gi|284012139|gb|ADB58092.1| lysine 2,3-aminomutase YodO family protein [Archaeoglobus profundus DSM 5631] Length = 368 Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats. Identities = 106/321 (33%), Positives = 184/321 (57%), Gaps = 8/321 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + + + +L I ++ ++++++ + + +T +LI+ ++ NDPI R IP + Sbjct: 9 RNVRTVDELKEYVNIPQDVEEKLRKVVEIHPMNVTRYYLSLIDWNDSNDPIKRMAIPSPD 68 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL+ L + D G++ ++ ++G+ H+Y + L+ + C VYCR+CFR+ MVG + V Sbjct: 69 ELSCLEGD-YDTSGEHENTKMRGLQHKYSETALVLATNRCAVYCRYCFRKRMVGLTRDEV 127 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + + + A+ YI+E ++ V+ +GGDP +L +K +++ L L I H+ +RF SRVP Sbjct: 128 I--RRLDRAVKYIEEHEEVTNVLISGGDPFVLDNKIIKRFLNKLVEIPHLDFIRFGSRVP 185 Query: 186 IVDPQRI-NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 + P R+ + +L + L E K +Y+ H NHP EF+EE+ AI RL + GI++ +Q+V Sbjct: 186 VTFPMRLNDDDLPEILGEFAELKRIYVVTHYNHPKEFTEESTGAIKRLLDNGIVVSNQAV 245 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKIVASLKEKI 301 LLKG+NDDP LA L R V I PYY+ F++ ++EG KIV K + Sbjct: 246 LLKGVNDDPYTLAELHRLLVRYGIVPYYVFQCRPVKRVKGIFQVPLKEGYKIVERAKAML 305 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 G + F + + GK++I Sbjct: 306 DGHSKRFRYI-MSHRTGKIEI 325 >gi|118497318|ref|YP_898368.1| hypothetical protein FTN_0722 [Francisella tularensis subsp. novicida U112] gi|195536004|ref|ZP_03079011.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis subsp. novicida FTE] gi|118423224|gb|ABK89614.1| aminomutase [Francisella novicida U112] gi|194372481|gb|EDX27192.1| lysine 2,3-aminomutase YodO family protein [Francisella tularensis subsp. novicida FTE] Length = 328 Score = 352 bits (903), Expect = 7e-95, Method: Composition-based stats. Identities = 99/319 (31%), Positives = 162/319 (50%), Gaps = 4/319 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + +S +L I E+ + + + + A+ + N NDP+ +Q +P +E Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNTAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K + Sbjct: 73 EVIDQAYSSDPLEEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR H+R+PI Sbjct: 131 GRKDWLKAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRIAHIKRLRIHTRIPI 190 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+R+ +L++ L E + IH NHP E + + GII L+QS LLK Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIITLNQSTLLKY 250 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD +L L + ++ PYY+H D +GT H+ + + + I+ L E SG Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMV 308 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++PG K + H Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327 >gi|95928491|ref|ZP_01311238.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] gi|95135281|gb|EAT16933.1| Protein of unknown function DUF160 [Desulfuromonas acetoxidans DSM 684] Length = 393 Score = 351 bits (902), Expect = 8e-95, Method: Composition-based stats. Identities = 101/331 (30%), Positives = 172/331 (51%), Gaps = 13/331 (3%) Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q L + +TS +L + ++ +++ ++ + + + +LI+P++ +DPI + Sbjct: 21 WQKELSN-NITSVDELKAYLPLSYDEEADLRTVTEAHPMNIPRYYLSLIDPNDAHDPIRK 79 Query: 59 QFIPQKEELNI---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 +P EEL + + E +DP GD+ H GI+H+Y L+ C +YCR CFR+ Sbjct: 80 LAVPAAEELVVAGAMGETTKDPYGDDKHDKGNGILHKYSYTALVVATEYCSMYCRHCFRK 139 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 MVG + ++ A YI +I V+ +GGDPL+L ++K+L L I H+ Sbjct: 140 RMVGLPNHQTV--ENFHNAAKYIAAHPEITNVVISGGDPLLLPTHVIRKMLAALEDIPHL 197 Query: 176 QILRFHSRVPIVDPQRI-NPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLAN 232 +R SR P+V P R + ELI L++ G K + + H NHP E + EA AI R+ Sbjct: 198 NFVRIGSRAPVVYPIRFADDELIDVLRDFGRKKTLQMPTHFNHPVELTSEAAEAIRRVRE 257 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQ 291 AG+ + +Q+V L G+NDD E L LM + + + PYYL+ HF++ ++ G Sbjct: 258 AGVTVNNQAVFLSGVNDDVETLTELMNGLLRIGVNPYYLYQCMPVARVRHHFQVPLKRGV 317 Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 IV + ++ G + + + GK++I Sbjct: 318 DIVDEARRRMDGYAK-RFKFIIGHDIGKLEI 347 >gi|89256661|ref|YP_514023.1| hypothetical protein FTL_1362 [Francisella tularensis subsp. holarctica LVS] gi|115315075|ref|YP_763798.1| hypothetical protein FTH_1327 [Francisella tularensis subsp. holarctica OSU18] gi|156502809|ref|YP_001428874.1| hypothetical protein FTA_1443 [Francisella tularensis subsp. holarctica FTNF002-00] gi|167010527|ref|ZP_02275458.1| radical SAM domain protein [Francisella tularensis subsp. holarctica FSC200] gi|290953399|ref|ZP_06558020.1| hypothetical protein FtulhU_03333 [Francisella tularensis subsp. holarctica URFT1] gi|295313360|ref|ZP_06803969.1| hypothetical protein FtulhU_03323 [Francisella tularensis subsp. holarctica URFT1] gi|89144492|emb|CAJ79801.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica LVS] gi|115129974|gb|ABI83161.1| conserved hypothetical protein [Francisella tularensis subsp. holarctica OSU18] gi|156253412|gb|ABU61918.1| lysine 2,3-aminomutase, YodO family protein [Francisella tularensis subsp. holarctica FTNF002-00] Length = 328 Score = 351 bits (902), Expect = 8e-95, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 165/319 (51%), Gaps = 4/319 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTADE 72 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I DP+ + N++ + G++H+Y R+LL +C V+CR+CFR+E K + Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTICAVHCRYCFRKEF--DYKENIP 130 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+ Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQRISHIKRLRIHSRIPV 190 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKVLKEIHKHGIIILNQSTLLKD 250 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++PG K + H Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327 >gi|307352679|ref|YP_003893730.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus petrolearius DSM 11571] gi|307155912|gb|ADN35292.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus petrolearius DSM 11571] Length = 368 Score = 351 bits (902), Expect = 9e-95, Method: Composition-based stats. Identities = 95/315 (30%), Positives = 162/315 (51%), Gaps = 9/315 (2%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72 D+ + +E+ ++ E+ ++ +LI+ ++P DPI + IP EL Sbjct: 9 DITKVPGLSEEEKKKLAEVQEMFAFRSNEYYLSLIDWNDPADPIRKLVIPDPAELEE--W 66 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 R D G+ + G+ H+Y L+ + +C +CR+CFR+ + + ++ D + Sbjct: 67 GRLDASGEARYIVAPGMEHKYDQTALVLVSDMCAGFCRYCFRKRIFMNGGAREVAR-DID 125 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 L YI +I V+ +GGDPL LS RL+K++ +R I HVQI+R ++VP +P RI Sbjct: 126 VDLEYISSHPEITNVLLSGGDPLFLSTNRLEKIIAWIREIDHVQIVRIGTKVPAYNPYRI 185 Query: 193 --NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 + +L + ++ K +YI NHP E +E+AI A++ L +G + +Q+ LL GI Sbjct: 186 LNDTKLPEIIRRYSTEEKKIYIVTQFNHPRELTEQAIKAVNILQESGAVFANQTPLLHGI 245 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND+PE +A L R + I PYY+ G F + +E+G I+ K SGL + Sbjct: 246 NDNPETMAELSRKLSFIGITPYYVFQCRPTLGNRDFVVPVEDGYFILEQAKMNCSGLAK- 304 Query: 308 FYILDLPGGYGKVKI 322 + + GK+ + Sbjct: 305 RFTFAMSHVCGKIAV 319 >gi|33152475|ref|NP_873828.1| hypothetical protein HD1410 [Haemophilus ducreyi 35000HP] gi|33148698|gb|AAP96217.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP] Length = 330 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 88/317 (27%), Positives = 149/317 (47%), Gaps = 3/317 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +L + + + + + + A + + DP+ Q + ++E Sbjct: 17 AFKDPVELLHFLELDPGLFQADIQARRLFPLRVPRPFAVKMRKGDRYDPLFLQAMSLQDE 76 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 +DP+ + +SP I+H+Y +R+L + + C + CR+CFRR ++ + Sbjct: 77 FVQARGFSKDPLKEQ-YSPAPNILHKYQNRLLFMIKNSCAINCRYCFRRHFPYAEVKS-- 133 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + LAYI + ++ EVIF+GGDP++ L +L + I H++ LR H+R+P+ Sbjct: 134 GPLAWQQGLAYIADYKELEEVIFSGGDPMMAKDNELAWLLTQIEQIPHIKTLRIHTRLPV 193 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RIN +L L ++ + + H NH E + + IS L A + +L+Q+VLLKG Sbjct: 194 VIPNRINRQLCDRLSKSPLNIVVVTHINHANELDDILASKISLLKQANVTVLNQAVLLKG 253 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND+ + L L I PYYLH D G SHF + ++ I L+ SG Sbjct: 254 INDNAKTLKALNDKLFAAGILPYYLHLLDKVEGASHFFIDDQQALVIYKELQRISSGYLV 313 Query: 307 PFYILDLPGGYGKVKID 323 P ++ K I Sbjct: 314 PKLAREIAQQPNKTLIS 330 >gi|148652299|ref|YP_001279392.1| lysine 2,3-aminomutase YodO family protein [Psychrobacter sp. PRwf-1] gi|148571383|gb|ABQ93442.1| L-lysine 2,3-aminomutase [Psychrobacter sp. PRwf-1] Length = 372 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 87/327 (26%), Positives = 157/327 (48%), Gaps = 5/327 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + +T L + I + + + + + + + NDP+ Q Sbjct: 43 WQTQVADVITDIDQLLAILELS--HIKDELYVPQGFGLRVPKAFVAKMKKGDANDPLLLQ 100 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P K+E + DP+ +N H+P+KG++H+Y R+L+ + C ++CR+CFR+ Sbjct: 101 VLPNKQEQTQVTGYVSDPLAENAHNPIKGLLHKYRSRVLVTVTGACAIHCRYCFRQHF-- 158 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + S YI++ +I EVI +GGDPL ++++RL L+ L + + +R Sbjct: 159 DYQANLPKSDQLRLIQDYIRQHPEINEVILSGGDPLSVTNRRLFLWLQALEDLPQINTIR 218 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+ IV P R++ EL+ L+ + + + +H NH E + GI LL+ Sbjct: 219 LHTRLSIVIPDRLDNELLDRLEHSRCRIVMVVHTNHANEIDNHTAKLLQHARQKGITLLN 278 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL G+ND + L E + PYYLH D AG +HF + ++ + + Sbjct: 279 QTVLLAGVNDGLKQQVALSERLFEAGVLPYYLHLLDKVAGAAHFDIAQKQAIDLYWQMLA 338 Query: 300 KISGLCQPFYILDLPGGYGKVKIDTHN 326 + G P + +LP K +D ++ Sbjct: 339 HLPGYLVPKLVQELPHKPFKTPVDLYH 365 >gi|256823217|ref|YP_003147180.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM 16069] gi|256796756|gb|ACV27412.1| lysine 2,3-aminomutase YodO family protein [Kangiella koreensis DSM 16069] Length = 349 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 97/330 (29%), Positives = 154/330 (46%), Gaps = 9/330 (2%) Query: 1 MQLR------HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND 54 Q R + ++S +L + + + + + + + + NPND Sbjct: 15 WQEREWKKLLSQAISSPFELLSRLNLTTDDLPYTVLAEHQFMQKVPAPFVECMEKGNPND 74 Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 P+ RQ + +E + DP+ + N S + G++H+Y R+L+ L C + CR+CFR Sbjct: 75 PLLRQVLAVSDENQEVAGFVPDPLQEQN-SEVPGLLHKYRSRVLVMLSTACAINCRYCFR 133 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 RE + + Y+ +I EVI +GGDPL ++ L+ ++ L I Sbjct: 134 REFPYQEHQA--GRNGWQPIFDYLTAHPEINEVILSGGDPLAVNDSYLKDFIQQLERIPS 191 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 + LR H+R+P+V PQR+ LI L + + +H NHP E E A+ RL G Sbjct: 192 IIRLRIHTRLPLVIPQRVTQGLIDALLQTRLQTVVVLHINHPNEMGELFAQAVRRLHQNG 251 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 I LL+QSVLL G+N++ LA L I PYYLH D G HF + + KI+ Sbjct: 252 IHLLNQSVLLDGVNNNSSTLAELSEKLFAHHILPYYLHQLDKVRGAHHFAVEEAQAIKIM 311 Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 L +++G P + + G K ID Sbjct: 312 QELNTRLAGFLVPKLVREEAGKTSKTPIDL 341 >gi|188576188|ref|YP_001913117.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A] gi|188520640|gb|ACD58585.1| lysine 2,3-aminomutase [Xanthomonas oryzae pv. oryzae PXO99A] Length = 313 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 92/315 (29%), Positives = 150/315 (47%), Gaps = 2/315 (0%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + + L + + + + + + + + +DP+ RQ +P E+ Sbjct: 1 MRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVLPLDAEM 60 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 +P D +GD G++ +Y R LL C V+CR+CFRR +++ + Sbjct: 61 QPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPYAEE--TAA 118 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 A+A I I EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV Sbjct: 119 RDGWREAVAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIV 178 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 P+R++ L+ L+ P +HANH EF A+ L + G LL+Q+VLL G+ Sbjct: 179 LPERVDAPLLAWLRSLPWPAAFVLHANHANEFDSAVDMAMHALRDTGAQLLNQAVLLGGV 238 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 ND + LA L + PYYLH D AG +HF + + + L ++SG P Sbjct: 239 NDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDARARALHTELATRLSGYLVP 298 Query: 308 FYILDLPGGYGKVKI 322 + ++PG GK + Sbjct: 299 RLVREIPGDTGKRPL 313 >gi|71898719|ref|ZP_00680888.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1] gi|71731484|gb|EAO33546.1| Protein of unknown function DUF160 [Xylella fastidiosa Ann-1] Length = 342 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 98/321 (30%), Positives = 159/321 (49%), Gaps = 2/321 (0%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 Q+ + + ++L + + + + + + + + + +DP+ RQ + Sbjct: 24 QVWREAIRDPRELLALLKLDPTSVGMSEAAAAQFPLRVPRGFVARMRVGDLHDPLLRQVL 83 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E + + D +GD GI+ +Y RILL C V+CR+CFRR ++ Sbjct: 84 PIDAEQDQIAGFGVDAVGDGAAKQATGIIQKYQGRILLIATGSCAVHCRYCFRRHFPYAE 143 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 S A+++ I EVI +GGDPL LS +L ++ LR H++ LR H Sbjct: 144 D--TASHDRWRETAAFVRADPSIEEVILSGGDPLSLSTAKLVELTDALRGTPHLKRLRIH 201 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 SR+P+V P+RI+ L++ L PV IHANH EF AA++ L G LL+Q+ Sbjct: 202 SRLPVVLPERIDTPLLEWLSALPWPVAFVIHANHANEFDASVDAALAALRGVGTQLLNQA 261 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL+G+ND+ LA L + PYYLH D AGT+H+ + + + A L ++ Sbjct: 262 VLLRGVNDNINALAALSERSFAAGVLPYYLHQLDRIAGTAHYEVEDARARTLHAELVARL 321 Query: 302 SGLCQPFYILDLPGGYGKVKI 322 SG P ++ ++PG K + Sbjct: 322 SGYLVPRFVREVPGDSSKRPL 342 >gi|254374142|ref|ZP_04989624.1| conserved hypothetical protein [Francisella novicida GA99-3548] gi|151571862|gb|EDN37516.1| conserved hypothetical protein [Francisella novicida GA99-3548] Length = 328 Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNIAKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K + Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKENIP 130 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+ Sbjct: 131 GRKDWLQAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQQIPHIKRLRIHSRIPV 190 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKD 250 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD +L L + ++ PYY+H D +GT H+ + ++ I+ L E SG Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNVDNDK--DIMKKLSEISSGFMV 308 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++PG K + H Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327 >gi|320591241|gb|EFX03680.1| L-lysine-aminomutase [Grosmannia clavigera kw1407] Length = 487 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 104/351 (29%), Positives = 174/351 (49%), Gaps = 25/351 (7%) Query: 22 KEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNI-LPEEREDPIG 79 + + D + ++ + A P + + IN +P NDPI RQF+P K + P+ D + Sbjct: 120 QTREDLVADVMDGIKAATMPYVLSRINWKDPRNDPIFRQFLPVKSRMIPDHPKLTLDSLH 179 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEA 133 ++ SP+ G+V+RYP++ L VCP YC FC R VG +V + + E Sbjct: 180 ESADSPVSGLVYRYPEKALFLPTSVCPTYCMFCTRSYAVGGNTESVKKASMKPTKRRWEE 239 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 AYI+ + + +++ +GGD L+ +L V + L + +++ RF S+ V P RI Sbjct: 240 VFAYIESQPALQDIVVSGGDAYYLTPDQLAYVGERLIAMPNIRRFRFASKGVAVAPARIL 299 Query: 194 PE---LIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 L ++AGK + + H NHP E S A +L+ AGI++ +Q+VL Sbjct: 300 DAEDSWFDALSYVATQARKAGKAMALHTHFNHPNEISWVTEQAARKLSEAGIMVRNQTVL 359 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 L+G+NDD ++ L+R + I PYY++ D+ H R ++ I A ++ I+G Sbjct: 360 LRGVNDDVATMSTLIRKLADNIIFPYYVYQCDMVEKVEHLRTPLQTILDIEAQIRGSIAG 419 Query: 304 LCQPFYILDLPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347 P +++DLPGG GK +H + G + D N V++Y Sbjct: 420 FMMPQFVVDLPGGGGKRLACSHLDYDRNTGVSRFMAPAVTGRDKDNKVYEY 470 >gi|304311512|ref|YP_003811110.1| hypothetical protein HDN1F_18820 [gamma proteobacterium HdN1] gi|301797245|emb|CBL45465.1| Conserved hypothetical protein [gamma proteobacterium HdN1] Length = 336 Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats. Identities = 89/329 (27%), Positives = 168/329 (51%), Gaps = 6/329 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + ++S +L+ + + ++ + + + + + I +DP+ RQ Sbjct: 7 WQQQLSQLVSSVDELWRLLDLPQSLLESASAAARAFPLRVPQAFVDKIQKGKLDDPLLRQ 66 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +PQ EL P+ DP+ + + +P +G++H+Y R+L+ C + CR+CFRR Sbjct: 67 ILPQGLELTPPPDFVTDPLAELHANPHRGLLHKYQSRVLIIAGSACAINCRYCFRRHFPY 126 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + LS + + +++ ++ EVIF+GGDPLI S+ RLQ+ + L + ++ +R Sbjct: 127 --EDNQLSQAQFDELIQHLETHPEVNEVIFSGGDPLINSNARLQRWVDALLLLPQLKRIR 184 Query: 180 FHSRVPIVDPQRINPELIQCLK---EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 FH+R P+V P RI+ L+ + ++G+ + +H+NHP E A+ +L +A + Sbjct: 185 FHTRTPVVVPARIDEGLLALFRSIAQSGRNAILVVHSNHPSELDHHFDTAMRKLRDAQVT 244 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 L +Q+VLL+G+ND + A L + + PYYLH D AG F + E ++ Sbjct: 245 LFNQAVLLRGVNDHVDAQAALSERLFDAGVLPYYLHLLDPVAGAHDFSIHDTEAFELYRQ 304 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + ++ G P ++PG K + + Sbjct: 305 MAARLPGFLLPRLAREVPGAPAKQILAPN 333 >gi|21672314|ref|NP_660381.1| hypothetical protein BUsg020 [Buchnera aphidicola str. Sg (Schizaphis graminum)] gi|22654299|sp|Q44634|Y020_BUCAP RecName: Full=Uncharacterized KamA family protein BUsg_020 gi|21622913|gb|AAM67592.1| hypothetical 38.7 kDa protein [Buchnera aphidicola str. Sg (Schizaphis graminum)] Length = 337 Score = 350 bits (898), Expect = 3e-94, Method: Composition-based stats. Identities = 98/287 (34%), Positives = 153/287 (53%), Gaps = 2/287 (0%) Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92 + + A+ + ++P DP+ Q I + +E + EDP+ + L G++H+ Sbjct: 49 KVFPFRVPYSFASRMKKNDPKDPLLLQVITKNQEFLNNLQFNEDPVKEKKDIVLPGLLHK 108 Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y DR+L L C + CR+CFR+ + + K+ L YI + ++ EVI +GG Sbjct: 109 YKDRVLWILKTNCAINCRYCFRKHFPYEKNKG--NKKNWIQILHYISQNIELNEVILSGG 166 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 DPL+ L ++ +L IKH++ LR H+R+PIV P RI +L Q + + I H Sbjct: 167 DPLMAKDHELLWLITSLSKIKHIKRLRIHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTH 226 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 NHP E +E+ ++ +L + +ILL+QSVLLK IND+ ILA L E I PYYLH Sbjct: 227 INHPQEINEQLSDSLLKLKKSNVILLNQSVLLKNINDNAIILAELSSRLCENNIIPYYLH 286 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 D GTSHF ++ ++ + I++ L + ISG P + D K Sbjct: 287 ILDKVKGTSHFLVSNKKAKSIISDLMKMISGFLVPRLVFDNGSKDNK 333 >gi|262278291|ref|ZP_06056076.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202] gi|262258642|gb|EEY77375.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus RUH2202] Length = 338 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 100/292 (34%), Positives = 152/292 (52%), Gaps = 2/292 (0%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 S + + + +N NP DP+ Q +P EL PE DP+G+ + L G++ Sbjct: 43 ASEQFKLRVPRAFVGKMNVKNPFDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVL 102 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R LL L C V+CR+CFRR + + + D YI+ I E+I + Sbjct: 103 HKYQSRFLLTLTGACAVHCRYCFRRHFPYQEN--LPKNDDWPNIKNYIEANPHINEIILS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL LS++++ L+ L +K ++ILR HSRVPIV P RI+ ELI LK + + + Sbjct: 161 GGDPLTLSNRKIALWLERLSSLKQIKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYY Sbjct: 221 VHSNHASELDDFTCSKLLQLSAEHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 LH D G HF L E I + + G P + ++ G K + Sbjct: 281 LHVLDKVKGAQHFDLIPSEIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 332 >gi|160938417|ref|ZP_02085772.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC BAA-613] gi|158438790|gb|EDP16547.1| hypothetical protein CLOBOL_03315 [Clostridium bolteae ATCC BAA-613] Length = 419 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 102/327 (31%), Positives = 172/327 (52%), Gaps = 14/327 (4%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFI 61 LR+ +T AQ+L + ++ + + I + + +T +LI+ +NP DP+ R I Sbjct: 61 LRN-NVTRAQELKTYMRLTSQEEEHMTRILEQFPMTVTRYYLSLIDWNNPEQDPVFRMSI 119 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E ++ + D G+ +++ L G+ H+Y L+ H C +YCR CFR+ +VG Sbjct: 120 PSIRETDLSGDF--DTSGEADNTVLPGLQHKYRQTALILSTHRCAMYCRHCFRKRLVGIS 177 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 G + + AYI +I V+ +GGD + S++ +++ L+ IKH+ ++RF Sbjct: 178 GGETAG--NVDQMAAYIVSHPEITNVLISGGDSFLNSNQIIRRYLEAFSSIKHLDLIRFG 235 Query: 182 SRVPIVDPQRI--NPELIQCLKEAGK--PVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 +R P+V P RI +PEL+ L K +Y+ NH E + +A+ AI L +AGII+ Sbjct: 236 TRTPVVLPMRIYDDPELLDILARYTKIKQIYVVTQFNHSNELTPQAVKAIRCLMDAGIIV 295 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVAS 296 +Q+VLLKGINDD L L++ + PYY+ +G S F++ + EG +IV Sbjct: 296 KNQTVLLKGINDDAGSLGTLLKNLTRYGVIPYYIFQCRPVSGVKSQFQIPLTEGCRIVEE 355 Query: 297 LKEKISGLCQP-FYILDLPGGYGKVKI 322 K +G + Y + GK++I Sbjct: 356 AKNMQNGQGKCIRYA--MSHVTGKIEI 380 >gi|124485170|ref|YP_001029786.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z] gi|124362711|gb|ABN06519.1| L-lysine 2,3-aminomutase [Methanocorpusculum labreanum Z] Length = 368 Score = 349 bits (897), Expect = 3e-94, Method: Composition-based stats. Identities = 99/325 (30%), Positives = 163/325 (50%), Gaps = 10/325 (3%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 ++ K +TS L N + ++ + ++ +++ + +LI+ + DPI +P Sbjct: 1 MKPKYITSISALDNLVGLAPKEREMMERVTDVFPFRANDYYLSLIDWKDRRDPIRAIIVP 60 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 EL DP + +++ G+ H+Y LL L VC CRFCFR+ + S + Sbjct: 61 DPRELES--GGSNDPSCEKDYTKKPGLQHKYDQTGLLLLTDVCGGICRFCFRKRLFMSCE 118 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + +D +AYI+E ++I V+ TGGDPL L + L+ VL+ LR I HV I+R S Sbjct: 119 RETV--RDVSENIAYIREHTEITNVLLTGGDPLTLDTRHLESVLRELREIPHVSIIRIGS 176 Query: 183 RVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 ++ +P RI + EL+ L K +Y+ H NHP E ++ +I A L A +I+ Sbjct: 177 KMLAYNPYRILNDAELLSVLSRYSTPEKRIYLMAHFNHPNEITDVSIQAAEALQKADVIV 236 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 ++Q+ +L GIN + E L L R I PYY+ A G F++ +EE IV Sbjct: 237 VNQTPILNGINAESETLTTLFRKLSFAGIAPYYVFQCRPATGNGLFQVPVEESYDIVQGA 296 Query: 298 KEKISGLCQPFYILDLPGGYGKVKI 322 + SGL + + + GKV++ Sbjct: 297 WKNCSGLAKRARFI-MSHSTGKVEV 320 >gi|319786811|ref|YP_004146286.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas suwonensis 11-1] gi|317465323|gb|ADV27055.1| lysine 2,3-aminomutase YodO family protein [Pseudoxanthomonas suwonensis 11-1] Length = 338 Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats. Identities = 96/323 (29%), Positives = 158/323 (48%), Gaps = 3/323 (0%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q L + + ++L + + + +++ + + + +DP+ RQ Sbjct: 18 WQRLWREAVRDPRELLALLGLDEAAARISGAAAGQFAMRVPRGFIARMRHGDLHDPLLRQ 77 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P +E I+P D +GD G++ +Y R LL C + CR+CFRR Sbjct: 78 VLPVVDEERIVPGFGLDAVGDGLAKKADGVIQKYHGRALLVATGSCAINCRYCFRRHFPY 137 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +++ + A+A I I EVI +GGDPL L+ +L ++ L I H++ LR Sbjct: 138 AEE--TAARDGWAGAVAAIAADPGIDEVILSGGDPLSLATSKLAELTAQLATIPHIRRLR 195 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 HSR+P+V P+RI+ ++ + PV IHANH EF A+ RL AG LL+ Sbjct: 196 IHSRLPVVLPERIDDAFVEWMSALPWPVAFVIHANHANEFDASVDQALGRLRQAGAQLLN 255 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL+G+ND + LA+L + PYYLH D G +HF + E +++ L Sbjct: 256 QAVLLRGVNDSVDALADLSERSYAAGVLPYYLHQLDRIQGAAHFEVGDERARELHRQLAA 315 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++SG P + ++ G GK + Sbjct: 316 RLSGYLVPKLVREVQGDPGKRPL 338 >gi|254482976|ref|ZP_05096212.1| KamA family protein [marine gamma proteobacterium HTCC2148] gi|214036848|gb|EEB77519.1| KamA family protein [marine gamma proteobacterium HTCC2148] Length = 346 Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats. Identities = 96/325 (29%), Positives = 166/325 (51%), Gaps = 4/325 (1%) Query: 1 MQLRHKTL-TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + S + L + + + + + + + + + + +P+DP+ RQ Sbjct: 13 WQAELQAVVRSGRQLLSQLGLDAQAVGYSELAGEDFPLKVPQSFISRMTHGDPDDPLLRQ 72 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPL-KGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 + EL +P +DP+G+ S G++ +Y R LL L C + CR+CFRR Sbjct: 73 VLSVSAELLQVPGFGDDPVGETGDSITHPGVIQKYHGRALLILSGGCAINCRYCFRRHFP 132 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 ++ S ++ A+ +I + I EVI +GGDPL++S ++L+ ++ L I H+Q L Sbjct: 133 YNENRN--SREEWLHAVRHIADDPSISEVILSGGDPLLVSDRQLKSLVGQLAAIPHLQRL 190 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R HSR+PIV P R+ L+ L + +H+NH E + E A+ +L++ I LL Sbjct: 191 RVHSRLPIVLPSRVTAGLVNALTGTRLQSVLVVHSNHGNEINTEVKNALQKLSSGKITLL 250 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLL GIND + LA+L + PYYLH D G +HF +T G +++ L+ Sbjct: 251 NQAVLLAGINDTEDELADLSEQLFTAGVLPYYLHLLDRVRGAAHFEVTARRGLELITQLE 310 Query: 299 EKISGLCQPFYILDLPGGYGKVKID 323 ++ G P + + G KV++ Sbjct: 311 NRLPGYLVPRLVREDAGELAKVRVT 335 >gi|27904534|ref|NP_777660.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] gi|46397205|sp|Q89B32|Y022_BUCBP RecName: Full=Uncharacterized KamA family protein bbp_022 gi|27903931|gb|AAO26765.1| putative aminomutase [Buchnera aphidicola str. Bp (Baizongia pistaciae)] Length = 340 Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats. Identities = 101/320 (31%), Positives = 169/320 (52%), Gaps = 3/320 (0%) Query: 7 TLTSAQDLYNANLI-KKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 +T+ +L + + + ++ +S+ + + + ++P DP+ Q +P + Sbjct: 21 AITNPDELLRTLNLKSNTKYFKNIQVQKLFSLRVPKTFVSRMKKNDPFDPLLLQILPHTK 80 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 EL +DP+ + + + G++ +Y +RILL L C + CR+CFRR SQ Sbjct: 81 ELKNNHNFVQDPLEETKNVIIPGLIRKYNNRILLLLKTNCAINCRYCFRRYFPYSQHPG- 139 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + ++ A+ YI+ ++ + EVI +GGDPL+ +Q ++ TL I H++ LR H+R+P Sbjct: 140 -NKENLNLAIQYIKNQTDLNEVILSGGDPLMAKDHEIQWIVNTLSNIYHIKRLRIHTRLP 198 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 IV P RI L + L + I H NH E + E I++L GI LL+QSVLL+ Sbjct: 199 IVIPSRITNNLCKILSTTRLKILIVTHINHAQEINHELQYNINKLHKLGITLLNQSVLLR 258 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 GIND+ +IL+ L ++ I PYYLH D T+HF ++ ++ IV L ISG Sbjct: 259 GINDNAKILSQLSNKLFDINILPYYLHILDKVKSTTHFYVSEKQASIIVVELLSMISGFL 318 Query: 306 QPFYILDLPGGYGKVKIDTH 325 P + + PG K+ I+ + Sbjct: 319 VPKLVCEHPGKNSKIYINLN 338 >gi|307719756|ref|YP_003875288.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192] gi|306533481|gb|ADN03015.1| L-lysine 2,3-aminomutase [Spirochaeta thermophila DSM 6192] Length = 324 Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats. Identities = 117/314 (37%), Positives = 173/314 (55%), Gaps = 5/314 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +TP L + + +ARQ P E LP E DP+ D HSPL +VHRYP Sbjct: 3 LPFLVTPYYRRL---ADAHPALARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYP 59 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 DR L+ + C YCRFCFRR S ++ ++ +A LAY++E ++ EV+ +GGDP Sbjct: 60 DRALILVTDRCAAYCRFCFRRHFTASGASSLTPGQE-QAILAYLREHPEVEEVLLSGGDP 118 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+L RL +L LR ++ ++R +R+P+V P RI L + A +P+++ H N Sbjct: 119 LMLPDTRLAALLSGLRALRPGLVIRLGTRIPVVLPARITARLARI-LAAARPLWVVTHFN 177 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 HP E + EA AA+ L G+ +++Q+VLL+G+ND E LA L R + +KPYYL Sbjct: 178 HPAELTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQG 237 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334 DLAAGTSHFR + + L +SGL P +DLP G GKV++ ++ + Sbjct: 238 DLAAGTSHFRTPLSRTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETW 297 Query: 335 YCITDHHNIVHDYP 348 Y + ++ YP Sbjct: 298 YYLQGPDGGLYRYP 311 >gi|241668391|ref|ZP_04755969.1| lysine 2,3-aminomutase [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254876924|ref|ZP_05249634.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] gi|254842945|gb|EET21359.1| conserved hypothetical protein [Francisella philomiragia subsp. philomiragia ATCC 25015] Length = 328 Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats. Identities = 100/316 (31%), Positives = 163/316 (51%), Gaps = 4/316 (1%) Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69 S +L I E+ I+ + + + AN + N NDP+ +Q +P +E I Sbjct: 16 SPLELLEFLEIDSEEAKVSLNITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVI 75 Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 DP+ + N++ + G++H+Y R+LL C ++CR+CFR+E K + K Sbjct: 76 DQAYSSDPLDEKNYNKVPGLLHKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRK 133 Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 D A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P Sbjct: 134 DWLKAFEYIANDQTIEEVILSGGDPLLNNDEVLEFFIENIQQISHIKRLRIHSRIPVVLP 193 Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 +R+ +L++ L E + IH NHP E + + + GII+L+QS LLK IND Sbjct: 194 ERMTNKLLKILSEHRLDTVLVIHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDIND 253 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309 D +L L + ++ PYY+H D +GT H+ + + + I+ L E SG P Sbjct: 254 DANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DCAKDIMKKLSEISSGFMVPIL 311 Query: 310 ILDLPGGYGKVKIDTH 325 ++PG K + H Sbjct: 312 TKEIPGYPSKKWLSFH 327 >gi|2754809|gb|AAC04238.1| 37.5 kDa protein [Buchnera aphidicola (Myzus persicae)] Length = 337 Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats. Identities = 102/313 (32%), Positives = 164/313 (52%), Gaps = 2/313 (0%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++T ++L ++ + + + + + + ++P DP+ Q I E Sbjct: 23 SITEPKELLKILNLENHPQYYTSKFNTLFPFRVPHSFVSRMKKNDPQDPLLLQVIINNRE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 P+ +DPI + H L G++H+Y DR+LL + C ++CR+CFR+ + Sbjct: 83 FLNSPKYVKDPIKEKKHIILPGLLHKYKDRVLLFVKTNCAIHCRYCFRKYFPYEKNQG-- 140 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 S + +L YIQ+ + EVIF+GGDPLI L ++ +L I H++ LR H+R+PI Sbjct: 141 SKINWIKSLEYIQKNKNLNEVIFSGGDPLIAKDHELLWLITSLSKINHIKRLRIHTRLPI 200 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P RI L + ++ + I H NHP E ++ ++ +L +G+I+L+QSVLLK Sbjct: 201 VIPNRITSNLCEIFIQSSLKIIIVTHINHPQEINKNLSNSLLKLKESGVIMLNQSVLLKN 260 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDDP ILA L + I PYYLH D GT HF ++ ++ + I+ SL + ISG Sbjct: 261 INDDPIILAELSNLLCDNNILPYYLHILDTVKGTMHFSVSSKKAKSIMKSLIKMISGYLI 320 Query: 307 PFYILDLPGGYGK 319 P + D K Sbjct: 321 PRLVQDTGSQNSK 333 >gi|328676803|gb|AEB27673.1| Lysine 2,3-aminomutase [Francisella cf. novicida Fx1] Length = 328 Score = 347 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 164/319 (51%), Gaps = 4/319 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + +S +L I E+ I+ + + + A+ + N NDP+ +Q +P +E Sbjct: 13 SFSSPLELLEFLEIDSEEAKVSLNITKKFKMIVPRSFADRMQKGNINDPLLKQVLPTIDE 72 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 I DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K + Sbjct: 73 EVIDQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQISCAVHCRYCFRKEF--DYKENIP 130 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 KD A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+ Sbjct: 131 GRKDWSKAFEYIANDQSIEEVILSGGDPLLNNDEILEFFIENIQQIVHIKRLRIHSRIPV 190 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P+R+ +L++ L E + IH NHP E + + GII+L+QS LLK Sbjct: 191 VLPERMTTKLLKILSEHRLDTVLVIHVNHPNELDGNVSKILKEIHKYGIIILNQSTLLKD 250 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 INDD +L L + ++ PYY+H D +GT H+ + + + I+ L E SG Sbjct: 251 INDDANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMV 308 Query: 307 PFYILDLPGGYGKVKIDTH 325 P ++PG K + H Sbjct: 309 PVLTKEIPGYPSKKWLSFH 327 >gi|326560914|gb|EGE11279.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 7169] gi|326563850|gb|EGE14101.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 46P47B1] gi|326566861|gb|EGE17000.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 103P14B1] gi|326571276|gb|EGE21298.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC1] gi|326571582|gb|EGE21597.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC7] gi|326576776|gb|EGE26683.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 101P30B1] Length = 356 Score = 347 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 160/295 (54%), Gaps = 2/295 (0%) Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92 + + + + + +DP+ RQ +P E + DP+ +NNH+P+KG++H+ Sbjct: 49 KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHK 108 Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y R+LL + C V+CR+CFR+ S+ + + + YI + +++ EVI +GG Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 DPL L++KRL+ L + I H++ +R H+R+P+V P R++ ELI ++ K + I +H Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 NHP E ++ IA +L +AG LL+QSVLL INDD + L+ L + I PYYLH Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327 D G +HF + I + + L E + G P + + P K ID + Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPIDIYQY 341 >gi|326575138|gb|EGE25066.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis CO72] gi|326577548|gb|EGE27425.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis O35E] Length = 356 Score = 347 bits (892), Expect = 1e-93, Method: Composition-based stats. Identities = 97/295 (32%), Positives = 160/295 (54%), Gaps = 2/295 (0%) Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92 + + + + + +DP+ RQ +P E + DP+ +NNH+P+KG++H+ Sbjct: 49 KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHK 108 Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y R+LL + C V+CR+CFR+ S+ + + + YI + +++ EVI +GG Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 DPL L++KRL+ L + I H++ +R H+R+P+V P R++ ELI ++ K + I +H Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 NHP E ++ IA +L +AG LL+QSVLL INDD + L+ L + I PYYLH Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327 D G +HF + I + + L E + G P + + P K +D + Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPLDIYQY 341 >gi|296112655|ref|YP_003626593.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4] gi|295920350|gb|ADG60701.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis RH4] Length = 356 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 97/295 (32%), Positives = 160/295 (54%), Gaps = 2/295 (0%) Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92 + + + + + +DP+ RQ +P E + DP+ +NNH+P+KG++H+ Sbjct: 49 KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMAVDGYSTDPLDENNHNPIKGLLHK 108 Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y R+LL + C V+CR+CFR+ S+ + + + YI + +++ EVI +GG Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 DPL L++KRL+ L + I H++ +R H+R+P+V P R++ ELI ++ K + I +H Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 NHP E ++ IA +L +AG LL+QSVLL INDD + L+ L + I PYYLH Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327 D G +HF + I + + L E + G P + + P K +D + Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPLDIYQY 341 >gi|146328795|ref|YP_001209500.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A] gi|146232265|gb|ABQ13243.1| lysine 2,3-aminomutase [Dichelobacter nodosus VCS1703A] Length = 304 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 132/293 (45%), Positives = 197/293 (67%), Gaps = 5/293 (1%) Query: 32 SNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91 + Y + ++ + +LIN IARQF+P ++EL + PEE DPIGD HSP+ +VH Sbjct: 2 TRDYPVRISKTMNDLINHSAA---IARQFLPSEDELTVAPEELRDPIGDEAHSPVDFLVH 58 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 RY +R+L K+ VC V+CRFCFRRE++G QKG+ + A Y+++ +I EVI +G Sbjct: 59 RYRNRVLWKVTQVCAVHCRFCFRRELIG-QKGSRPDEAAIQQAHDYMRQHHEIEEVILSG 117 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 GDP+ LS +RL+ + L I+H++ +R H+R+PIV P++I E + L++ GK + + Sbjct: 118 GDPMTLSAERLRLYVAPLLEIEHIRRIRVHTRMPIVAPEQIKEEWLTTLQKTGKQIVYVL 177 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271 H NH EF+ + + ++RLA + LLSQ+VLL+G+NDD +LA LM F+ RIKPYYL Sbjct: 178 HVNHADEFNPASDSLLARLATDHL-LLSQTVLLRGVNDDAAVLAQLMEAFLARRIKPYYL 236 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 HH DLA GT HFR+TI+EG+ I L++ +SG+ P YI+++PGG GK+ + T Sbjct: 237 HHLDLARGTGHFRVTIDEGRAIYQQLRQYVSGIALPTYIVEIPGGDGKIAVMT 289 >gi|121998759|ref|YP_001003546.1| lysine 2,3-aminomutase YodO family protein [Halorhodospira halophila SL1] gi|121590164|gb|ABM62744.1| L-lysine 2,3-aminomutase [Halorhodospira halophila SL1] Length = 342 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 96/319 (30%), Positives = 155/319 (48%), Gaps = 6/319 (1%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 + ++L + + + ++ + + + + I P +PNDP+ RQ +P E Sbjct: 28 AIRQPEELLRRLDLPESLLAPAEQAARTFPMRVPVPYLARIRPGDPNDPLLRQVLPIGAE 87 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 L P DP+ + G++ +Y R LL C ++CR+CFRR +++ Sbjct: 88 LETHPGYTADPLAEQGARTGSGVLQKYNGRSLLIATGGCAIHCRYCFRRCFPYNREAG-- 145 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 AL +++ EVI +GGDPL+L + L L+ L I V+ +R H+R+P+ Sbjct: 146 ----WRTALDQLEQHGAPEEVILSGGDPLLLDDQALGACLERLGRIAAVRRVRIHTRLPV 201 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 V P R+ L + L + I +HANHP E E +A++RL N +L+Q+VLL+G Sbjct: 202 VIPSRVTAALARHLGQIRLQSVIVVHANHPREIDAEVSSALARLRNVCSTVLNQTVLLRG 261 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDD LA+L + PYYLH D AG +HF + + GQ++ A L + G Sbjct: 262 VNDDTATLASLSERLFAADVLPYYLHLLDPVAGAAHFDVDAKTGQRLWAELARSLPGYLV 321 Query: 307 PFYILDLPGGYGKVKIDTH 325 P + PG K I Sbjct: 322 PRLAREEPGAAAKTVITPD 340 >gi|268323521|emb|CBH37109.1| conserved hypothetical protein [uncultured archaeon] Length = 366 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 102/322 (31%), Positives = 181/322 (56%), Gaps = 11/322 (3%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++++ L + + E +++EI + + +T +LI+ ++PNDPI R +P +EE Sbjct: 10 SISTISQLGDYIELTPEMEQQLQEIVAIHPMRITQYYMSLIDKNDPNDPIRRMTVPSEEE 69 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 LN+L D G+ ++ + G+ H+Y L+ + C YCR+CFR+ +VG +L Sbjct: 70 LNLLGSY--DTSGERENTMMPGLQHKYAQTALILATNRCATYCRYCFRKRLVGLPTEEIL 127 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + A+ YI+ +I V+ +GGDP +LS +++ L+ L I H+ +RF +RVP+ Sbjct: 128 QRFN--DAVKYIENHEEINNVLISGGDPFVLSTGVVKEFLEKLSTISHLDFIRFGTRVPV 185 Query: 187 VDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 P RI + EL+ L++ + +Y+ NHP E +++A A+SRL +G+IL +Q+ Sbjct: 186 TFPDRIIEDDELLTLLEKNSQENRRIYVVTQFNHPREITQKATDAVSRLIRSGVILDNQT 245 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEEGQKIVASLKEK 300 VLLKG+NDDPE LA L V + + PYY+ +F++ + +G +IV K+K Sbjct: 246 VLLKGVNDDPETLAELQNKLVSIGVNPYYVFQCRPVKRVKNNFQVPLYKGYEIVDRAKKK 305 Query: 301 ISGLCQPFYILDLPGGYGKVKI 322 ++G + + + GK++I Sbjct: 306 LNGHSK-RFKYIMSHQTGKIEI 326 >gi|294650801|ref|ZP_06728149.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194] gi|292823316|gb|EFF82171.1| lysine 2,3-aminomutase [Acinetobacter haemolyticus ATCC 19194] Length = 338 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 153/292 (52%), Gaps = 2/292 (0%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 S + + + ++ +P DP+ Q +P EL PE DP+G+ + + G++ Sbjct: 43 ASEQFKLRVPRAFVGKMSIGDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQMAGVL 102 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R LL L C ++CR+CFRR + + + D E YI++ I EVI + Sbjct: 103 HKYQSRFLLTLTGACAIHCRYCFRRHFPYQEN--LPKNDDWENIKHYIEQNPLINEVILS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL L+++++ L+ L + ++ILR HSRVPIV P R++ ELI LK + + + Sbjct: 161 GGDPLTLNNRKISLWLERLASLPQIKILRIHSRVPIVIPNRVDEELISILKNSRLRIIVV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L L + R+ PYY Sbjct: 221 VHSNHAAELDDFTCSKLLQLSLHHITVLNQAVLLKGVNDSAKTLTELSNRLFDARVMPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 LH D G HF L E I + + + G P + ++ G K + Sbjct: 281 LHVLDKVKGAQHFDLRSSEIDHIYSDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|226951346|ref|ZP_03821810.1| aminomutase [Acinetobacter sp. ATCC 27244] gi|226837868|gb|EEH70251.1| aminomutase [Acinetobacter sp. ATCC 27244] Length = 338 Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats. Identities = 94/292 (32%), Positives = 153/292 (52%), Gaps = 2/292 (0%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 S + + + ++ +P DP+ Q +P EL PE DP+G+ + + G++ Sbjct: 43 ASEQFKLRVPRAFVGKMSIGDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQMAGVL 102 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H+Y R LL L C ++CR+CFRR + + + D E YI++ I EVI + Sbjct: 103 HKYRSRFLLTLTGACAIHCRYCFRRHFPYQEN--LPKNDDWENIKHYIEQNPLINEVILS 160 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL L+++++ L+ L + ++ILR HSRVPIV P R++ ELI LK + + + Sbjct: 161 GGDPLTLNNRKISLWLERLASLPQIKILRIHSRVPIVIPNRVDEELISILKNSRLRIIVV 220 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 +H+NH E + + + +L+ I +L+Q+VLLKG+ND + L L + R+ PYY Sbjct: 221 VHSNHAAELDDFTCSKLLQLSLHHITVLNQAVLLKGVNDSAKTLTELSNRLFDARVMPYY 280 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 LH D G HF L E I + + + G P + ++ G K + Sbjct: 281 LHVLDKVKGAQHFDLRSSEIDHIYSDVLASLPGYLVPKLVREIAGEKNKTPL 332 >gi|326566522|gb|EGE16668.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis 12P80B1] gi|326569812|gb|EGE19862.1| L-lysine 2,3-aminomutase [Moraxella catarrhalis BC8] Length = 345 Score = 346 bits (889), Expect = 2e-93, Method: Composition-based stats. Identities = 98/295 (33%), Positives = 160/295 (54%), Gaps = 2/295 (0%) Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92 + + + + + +DP+ RQ +P E + DP+ +NNH+P+KG++H+ Sbjct: 49 KQFGLRVPHAFIKKMKKGDIHDPLLRQVLPDGRERMTVDGYSTDPLDENNHNPIKGLLHK 108 Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y R+LL + C V+CR+CFR+ S+ + + + YI + +++ EVI +GG Sbjct: 109 YQSRVLLTVTGACAVHCRYCFRQHF--DYHANQPSTHEMDEVMDYITKHTEVNEVILSGG 166 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 DPL L++KRL+ L + I H++ +R H+R+P+V P R++ ELI ++ K + I +H Sbjct: 167 DPLSLNNKRLKLWLDKITAIGHIRTVRLHTRLPVVLPNRVDHELIALIRHYQKNIVIVLH 226 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 NHP E ++ IA +L +AG LL+QSVLL INDD + L+ L + I PYYLH Sbjct: 227 INHPNEIDDQLIAKTKQLKDAGATLLNQSVLLASINDDIQTLSKLNQDLFGAGILPYYLH 286 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNI 327 D G +HF + I + + L E + G P + + P K ID + Sbjct: 287 ILDKVQGAAHFDIDIHDAVGLYWQLLEALPGYLVPKLVQERPNHPFKTPIDIYQY 341 >gi|149916871|ref|ZP_01905372.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1] gi|149822149|gb|EDM81540.1| L-lysine 2,3-aminomutase [Plesiocystis pacifica SIR-1] Length = 471 Score = 346 bits (889), Expect = 3e-93, Method: Composition-based stats. Identities = 100/346 (28%), Positives = 175/346 (50%), Gaps = 22/346 (6%) Query: 1 MQLRHKTLTSAQDLYN--ANLIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55 Q++ +++T L A+L + + +++E + ++P + LI+ P DP Sbjct: 65 WQMK-RSVTKVDKLLAGLADLASEAFVADLREGFRRAPMAVRVSPYMIALIDWSKPYADP 123 Query: 56 IARQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 I RQFIP EL P+ D + + +P+ G+ HRYPD+ L L CPVYCRFC R Sbjct: 124 IRRQFIPTGSELLPDHPKLDLDSLHEQADAPVPGLTHRYPDKALFLALDTCPVYCRFCTR 183 Query: 115 REMVGSQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 VG V ++ EAA YI + ++ +++ +GGD L ++ + + Sbjct: 184 SYAVGLDTEEVEKVSLKPTNDRWEAAFEYIASRPELEDIVISGGDSYNLRADHIKTIGER 243 Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEF 219 L + +++ +RF ++ P V PQ+I + + L ++ K V I H NHP E Sbjct: 244 LLAMPNIRRMRFATKGPAVMPQKILTDTAWVDALTSIHEQGRKLHKEVCIHTHFNHPNEI 303 Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279 ++ + A++ L GI + +QSVL +G+ND PE + L++ + + PYY++ DL G Sbjct: 304 TQISQRAMNLLFERGITVRNQSVLQRGVNDTPEAMGQLVKRLAHVNVHPYYVYVHDLVRG 363 Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + R T++ I ++ +G P +++D PGG GK ++ Sbjct: 364 VENLRTTVQTATAIEKEIRGMTAGFNTPVFVVDAPGGGGKRDAHSY 409 >gi|315185344|gb|EFU19118.1| lysine 2,3-aminomutase YodO family protein [Spirochaeta thermophila DSM 6578] Length = 324 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 119/314 (37%), Positives = 175/314 (55%), Gaps = 5/314 (1%) Query: 35 YSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP 94 +TP L + H P +ARQ P E LP E DP+ D HSPL +VHRYP Sbjct: 3 LPFLVTPYYRRLADTH-PA--LARQITPSPLEARTLPYETADPLADAAHSPLPRLVHRYP 59 Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 DR L+ + C YCRFCFRR S + ++ ++ +A LAY++E ++ EV+ +GGDP Sbjct: 60 DRALILVTDRCAAYCRFCFRRHFTASGESSLTPGQE-QAILAYLREHPEVEEVLLSGGDP 118 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+L RL +L LR ++ ++R +R+P+V P RI L + A +P+++ H N Sbjct: 119 LMLPDTRLAALLSGLRALRPGLVIRLGTRIPVVLPTRITARLARI-LAAARPLWVVTHFN 177 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 HP E + EA AA+ L G+ +++Q+VLL+G+ND E LA L R + +KPYYL Sbjct: 178 HPAELTPEAHAAVEALLTCGLPVVNQTVLLRGVNDHEETLAALFRGLLRWGVKPYYLLQG 237 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGS 334 DLAAGTSHFR + + L +SGL P +DLP G GKV++ ++ + Sbjct: 238 DLAAGTSHFRTPLSHTFDLYDRLSSMLSGLALPVLAVDLPDGGGKVRLHRSSVVRTDETW 297 Query: 335 YCITDHHNIVHDYP 348 Y + ++ YP Sbjct: 298 YYLQGPDGGLYRYP 311 >gi|225569398|ref|ZP_03778423.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM 15053] gi|225161606|gb|EEG74225.1| hypothetical protein CLOHYLEM_05482 [Clostridium hylemonae DSM 15053] Length = 393 Score = 346 bits (888), Expect = 3e-93, Method: Composition-based stats. Identities = 114/349 (32%), Positives = 184/349 (52%), Gaps = 19/349 (5%) Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q LRH +T+ +L + I Y +++ +LIN + D I + Sbjct: 32 WQDELRH-NITTLDELAAYIPGIDTGDCNARNILEKYPMSVPRYYLSLINTDDEGDCIRK 90 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 IP E++I D G+++++ L+G+ H+YP +LL + C +YCR+CFR+ MV Sbjct: 91 MSIPSFSEMDITGTF--DTSGESSNTKLRGLQHKYPQTVLLLSTNRCAMYCRYCFRKRMV 148 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 GS ++ +D + A++YI E ++I V+ +GGD +L + ++ L L I H+ + Sbjct: 149 GSHTEEIV--EDIDKAVSYIAEHTEISNVLISGGDSFLLDNAAIEHYLSALCSIGHIDYI 206 Query: 179 RFHSRVPIVDPQRINP--ELIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 RF ++VP+V PQRI EL LK+ K +Y+ NHP E +E A+ A++ L + G Sbjct: 207 RFGTKVPVVFPQRITDDRELQDILKKYCTKKQLYVMTQFNHPSELTEHAVNAVNCLKSLG 266 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKI 293 +I+ +Q+VLLKGINDDP +LA LM+ F ++ I PYY+ G + F++ + G I Sbjct: 267 LIVKNQTVLLKGINDDPAVLAGLMKQFTKIGILPYYVFQCRPVTGVKNQFQVPLRTGYDI 326 Query: 294 VASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 V K +G + Y L P GKV+I I K+ + H Sbjct: 327 VEQAKRLQNGNGKCFRYALSNP--DGKVEI----IGKMDDSHMIFKYHQ 369 >gi|289620587|emb|CBI52948.1| unnamed protein product [Sordaria macrospora] Length = 517 Score = 345 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 107/342 (31%), Positives = 177/342 (51%), Gaps = 25/342 (7%) Query: 31 ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKG 88 + +I +TP I + +N +P +DPI RQF+P K L P+ D + + SP+KG Sbjct: 171 TAATMAIRMTPYILSRVNWQDPRHDPIVRQFLPMKSIMLPDHPKLTLDSLHETADSPVKG 230 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKS 142 +VHRY D+ L VCP YC FC R VG+ TV + + E A AYI+ + Sbjct: 231 LVHRYTDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIESRP 290 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQC 199 ++ +++ +GGD L ++L + + L + +++ RF S+ V P RI E + Sbjct: 291 ELQDIVVSGGDAYYLQPEQLTLIGERLISMPNIKRFRFASKGLAVAPTRILDESDGWVNA 350 Query: 200 L-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 L K+AGK + + H N+P E S + A +L G+++ +Q+VLL+G+NDD E Sbjct: 351 LIDISNKAKKAGKSMALHTHFNNPNEISWVSSDATQKLFENGVMVRNQTVLLRGVNDDYE 410 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 ++ L+R + I PYY++ D+ H R ++ + A ++ I+G P +++D Sbjct: 411 TMSTLIRQLADNNITPYYVYQCDMVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVD 470 Query: 313 LPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347 LPGG GK +H +K G ++ D N V++Y Sbjct: 471 LPGGGGKRLACSHQNYDRKTGVSTFMAPAVTSRDKANKVYEY 512 >gi|167627832|ref|YP_001678332.1| lysine 2,3-aminomutase [Francisella philomiragia subsp. philomiragia ATCC 25017] gi|167597833|gb|ABZ87831.1| Lysine 2,3-aminomutase [Francisella philomiragia subsp. philomiragia ATCC 25017] Length = 328 Score = 345 bits (887), Expect = 4e-93, Method: Composition-based stats. Identities = 99/316 (31%), Positives = 161/316 (50%), Gaps = 4/316 (1%) Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69 S +L I E+ I+ + + + AN + N NDP+ +Q +P +E I Sbjct: 16 SPLELLEFLEIDSEEAKVSLNITKKFKMIVPRSFANRMQKGNINDPLLKQVLPTIDEEVI 75 Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 DP+ + N++ + G++H+Y R+LL C ++CR+CFR+E K + K Sbjct: 76 DQAYSSDPLDEKNYNKVPGLLHKYHGRVLLISQTSCAIHCRYCFRKEF--DYKENIPGRK 133 Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 D A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ R HSR+P+V P Sbjct: 134 DWLKAFEYIANDQTIEEVILSGGDPLLNNDEVLEFFIENIQRISHIKRFRIHSRIPVVLP 193 Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 +R+ L++ L E + IH NHP E + + + GII+L+QS LLK IND Sbjct: 194 ERMTNRLLKILSEHRLDTVLVIHVNHPNELDDGIREVLKEIHKHGIIILNQSTLLKDIND 253 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309 D +L L + ++ PYY+H D +GT H+ + + + I+ L E SG P Sbjct: 254 DANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DCAKDIMKKLSEISSGFMVPIL 311 Query: 310 ILDLPGGYGKVKIDTH 325 ++PG K + H Sbjct: 312 TKEIPGYPSKKWLSFH 327 >gi|239625483|ref|ZP_04668514.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales bacterium 1_7_47_FAA] gi|239519713|gb|EEQ59579.1| LOW QUALITY PROTEIN: lysine 2,3-aminomutase [Clostridiales bacterium 1_7_47FAA] Length = 387 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 100/349 (28%), Positives = 181/349 (51%), Gaps = 18/349 (5%) Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIAR 58 + +T +T A +L + Q++ + I + + + +T +LIN NP DP+ R Sbjct: 23 WKEEVRTNITKASELREYMDLTDSQVEHLDRILSQFPMTVTRYYLSLINWDNPFTDPVFR 82 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 IP EE ++ + D G+ +++ + G+ H+Y L+ H C +YCR CFR+ +V Sbjct: 83 MCIPSIEETDLSGDF--DTSGEADNTVISGLQHKYSQTALILSTHRCAMYCRHCFRKRLV 140 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G + E AY+ + S+I ++ +GGD + S++ +++ L+ I H+ ++ Sbjct: 141 GISDDETA--DNIEEMAAYVSQHSEISNILISGGDAFLNSNQVIRRYLEQFCSIPHLDLI 198 Query: 179 RFHSRVPIVDPQRI--NPELIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 RF +R P+V P RI +PEL+ LK K +Y+ NHP E + EA AI L ++G Sbjct: 199 RFGTRTPVVLPMRIYDDPELLALLKTYTQKKQIYVVTQFNHPNEITHEARKAIKALLDSG 258 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH-FRLTIEEGQKI 293 I++ +Q+VLLKG+ND+ + L L++ + PYY+ +G + F+L +++G +I Sbjct: 259 IVVKNQTVLLKGVNDNSQTLGLLLKDLTRCGVIPYYIFQCRPVSGVKNQFQLPLKQGYEI 318 Query: 294 VASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 V + K +G + Y + GK++I + + +G H Sbjct: 319 VEAAKHLQNGQGKCIRYA--MSHVTGKIEI----LGPMPDGQMLFKYHQ 361 >gi|145631426|ref|ZP_01787196.1| DNA repair protein RecO [Haemophilus influenzae R3021] gi|144982963|gb|EDJ90472.1| DNA repair protein RecO [Haemophilus influenzae R3021] Length = 297 Score = 345 bits (886), Expect = 5e-93, Method: Composition-based stats. Identities = 94/281 (33%), Positives = 141/281 (50%), Gaps = 3/281 (1%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIP 62 L++ ++ + L A + ++ ++ +S+ + + I NP DP+ Q + Sbjct: 20 LKN-AISDPKLLLKALNLPEDDFEQSIAARKLFSLRVPQPFIDKIEKGNPQDPLFLQVMC 78 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E DP+ + N + + I+H+Y +R+L C V CR+CFRR + Sbjct: 79 SDLEFVQAEGFSTDPLEEKNANAVPNILHKYQNRLLFMAKGGCAVNCRYCFRRHFPYDEN 138 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + K + AL YI S+I EVIF+GGDPL+ L ++K L I H+Q LR H+ Sbjct: 139 PG--NKKSWQLALDYIATHSEIEEVIFSGGDPLMAKDHELAWLIKHLENIPHLQRLRIHT 196 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 R+P+V PQRI E L E+ + H NHP E + A+ +L + LL+QSV Sbjct: 197 RLPVVIPQRITDEFCTLLAESRLQTVMVTHINHPNEIDQIFANAMQKLNAVNVTLLNQSV 256 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283 LLK +NDD +IL L + I PYYLH D G SHF Sbjct: 257 LLKSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQGASHF 297 >gi|167758002|ref|ZP_02430129.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704] gi|167664434|gb|EDS08564.1| hypothetical protein CLOSCI_00339 [Clostridium scindens ATCC 35704] Length = 363 Score = 345 bits (886), Expect = 6e-93, Method: Composition-based stats. Identities = 109/340 (32%), Positives = 187/340 (55%), Gaps = 16/340 (4%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 +T+ +L + E D ++ N Y +++ +L+NP + NDPI + IP E+ Sbjct: 11 VTTLDELSASIPQINEYGDIASKVLNKYPMSIPRYYLSLVNPDDANDPIRKMCIPSFLEM 70 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 ++ D G+++++ L+G+ H+YP +L+ + C +YCR+CFR+ MVGS V++ Sbjct: 71 DLAGTF--DTSGESSNTKLQGLQHKYPQTVLMLSTNRCAMYCRYCFRKRMVGSGTQEVVA 128 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 D + A++YI + +I V+ +GGD +L +++ L +L I H+ +RF ++ P+V Sbjct: 129 --DIKEAISYILKHEEITNVLISGGDSFLLDTDIIREYLDSLSAIGHLDYIRFGTKTPVV 186 Query: 188 DPQRINPE--LIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 PQRI + L L+E G K +YI NHP E +E++I+A+ L G+I+ +Q+VL Sbjct: 187 FPQRILEDSRLQDILREYGHKKQIYIVTQFNHPRELTEDSISAVRCLQGLGLIVKNQTVL 246 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLKEKIS 302 LKG+ND PE LA L R F EL I PYY+ G + F++ ++ G I+ K + Sbjct: 247 LKGVNDCPETLARLFRRFTELGIIPYYIFQCRPVTGVMNQFQVPLQAGYDIIEQAKAMQN 306 Query: 303 GLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 G + ++L P GK++I + + +G H Sbjct: 307 GNGKCFRFVLSNP--DGKIEI----LGRTADGQMVFKYHQ 340 >gi|78486083|ref|YP_392008.1| hypothetical protein Tcr_1742 [Thiomicrospira crunogena XCL-2] gi|78364369|gb|ABB42334.1| L-lysine 2,3-aminomutase [Thiomicrospira crunogena XCL-2] Length = 323 Score = 345 bits (885), Expect = 7e-93, Method: Composition-based stats. Identities = 95/317 (29%), Positives = 158/317 (49%), Gaps = 7/317 (2%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + S + L + + + + + + + + AN I +PNDP+ +Q +P E Sbjct: 2 IQSVEQLCDFVDLSADDLPI--DFDSAFPFKVPKHFANQIEKGSPNDPLLKQILPGLAEQ 59 Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + P DP+GD +P ++H+Y R LL C ++CR+CFRR Q Sbjct: 60 ELYPGFSPDPVGDLAANPQPSLIHKYHGRALLIASPRCDIHCRYCFRRHFPYEQ----AK 115 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + +AAL I + I EVI +GGDP+ LS L +++ + I HV LR HSR PIV Sbjct: 116 KQHWQAALENIAQDHSITEVILSGGDPMTLSENTLIELVHEIEAIPHVSTLRMHSRTPIV 175 Query: 188 DPQRIN-PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 PQ+ + P L++ L ++ + +H NH E + E+ + + + + LL+Q+VLLKG Sbjct: 176 APQKAHRPTLLKALSKSRLQTVLVVHCNHANELTPESADLMQQFRQSNVFLLNQTVLLKG 235 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 IND + L+ L + I PYY H D +G+ HF + + I L++ + G Sbjct: 236 INDSADTLSALSKKLFSQGILPYYCHLLDKVSGSGHFDVQKHQAWAIFDQLRQALPGYLV 295 Query: 307 PFYILDLPGGYGKVKID 323 P ++ ++ G K + Sbjct: 296 PRFVEEIAGEPYKTLLT 312 >gi|307353177|ref|YP_003894228.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus petrolearius DSM 11571] gi|307156410|gb|ADN35790.1| lysine 2,3-aminomutase YodO family protein [Methanoplanus petrolearius DSM 11571] Length = 358 Score = 345 bits (885), Expect = 8e-93, Method: Composition-based stats. Identities = 92/324 (28%), Positives = 158/324 (48%), Gaps = 15/324 (4%) Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 + LTS ++ + ++ + N++ +LIN +P DPI + IP Sbjct: 4 NACLTSIAEVNRQF---DAGLSGLEAVENNFPFLANQYYLSLINWDDPEDPIKKIIIPNS 60 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E+ DP + ++ G+ H+Y L+ + C +CRFCFR+ + + Sbjct: 61 AEMVK--WGSLDPSMEARNTKSPGLQHKYQATALMLISDNCGGFCRFCFRKRLFIKPEDE 118 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 + +D + YI+ +I V+ +GGD L++ RL K++ L IKHV+ +R +++ Sbjct: 119 KI--RDLSTDIDYIRSHPEISNVLLSGGDALMIPTSRLSKIVSALFSIKHVKSVRIGTKM 176 Query: 185 PIVDPQRINPE--LIQCLKE---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 P +P RI + L ++E +GK +Y NHP E ++EA A+ L +G L + Sbjct: 177 PAYNPFRITGDESLQAMIQENSRSGKMLYFMTQFNHPRELTKEAKEAMDLLRLSGASLAN 236 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+ +L G+N+DPE L+ L E PYYL AAG HF + +E +I K Sbjct: 237 QTPILNGVNNDPETLSGLCSNLAEAGNVPYYLFQCRPAAGNRHFTVPVENTYEIYEKAKR 296 Query: 300 KISGLCQP-FYILDLPGGYGKVKI 322 +SGL + Y+ + GK+++ Sbjct: 297 SLSGLAKRARYV--MSHATGKIEV 318 >gi|269469270|gb|EEZ80789.1| lysine 2,3-aminomutase [uncultured SUP05 cluster bacterium] Length = 314 Score = 345 bits (885), Expect = 8e-93, Method: Composition-based stats. Identities = 98/284 (34%), Positives = 161/284 (56%), Gaps = 6/284 (2%) Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92 H+ I + ANLI+ +NP DP+ +Q I + P+ D +++P++G++H+ Sbjct: 31 QHFPIKIPLEFANLIDKNNPEDPLLKQVINSQARFGSSEFFLS-PLDDESNAPVEGLIHK 89 Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 YP+R+LL VC ++C++CFR+ ++ + + A YI+ +QI EVI +GG Sbjct: 90 YPNRVLLIASRVCAIHCQYCFRQNFNYAEHDAL---SNWLAIEDYIRAHTQINEVILSGG 146 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 DPL LS ++LQ +++ + I H++ LR HSR +V P RI +L Q L + V + +H Sbjct: 147 DPLSLSDEKLQALIQKIERIPHIRTLRIHSRSAVVTPSRITDQLAQILNQTSLNVVVVLH 206 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 +NH E S E + I +L+ I LL+QSVLLKG+ND + L++L + + PYYLH Sbjct: 207 SNHANELSSEFVKNIGKLSQ--ITLLNQSVLLKGVNDSAQALSDLSLQLFDAGVLPYYLH 264 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 D +G HF + + +++ LK+ +SG P + D G Sbjct: 265 LLDKVSGAEHFLVGDQCAKELHQQLKKNLSGYLVPRLVRDENGE 308 >gi|328675885|gb|AEB28560.1| Lysine 2,3-aminomutase [Francisella cf. novicida 3523] Length = 328 Score = 344 bits (884), Expect = 9e-93, Method: Composition-based stats. Identities = 102/316 (32%), Positives = 163/316 (51%), Gaps = 4/316 (1%) Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69 S +L I Q +++ + + + AN I N NDP+ +Q +P +E I Sbjct: 16 SPLELLEFLQIDINQARVSIDVTKSFKMIVPKSFANRIQKGNINDPLLKQVLPIVDEEVI 75 Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 DP+ + N++ + G++H+Y R+LL C V+CR+CFR+E K + K Sbjct: 76 DQAYSSDPLDEKNYNKVPGLLHKYHGRVLLIAQTSCAVHCRYCFRKEF--DYKDNIPGRK 133 Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 D A YI I EVI +GGDPL+ + + L+ ++ ++ I H++ LR HSR+P+V P Sbjct: 134 DWLQAFEYIANDQSIEEVILSGGDPLLNNDEVLEFFIENIQQIAHIKRLRIHSRIPVVLP 193 Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 +RI +L++ L E + IH NHP E + + + GII+L+QS LLK IND Sbjct: 194 ERITTKLLRVLSEHRLDTILVIHVNHPNELDDNISEVLKEIHKHGIIILNQSTLLKDIND 253 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309 D +L L + ++ PYY+H D +GT H+ + + + I+ L E SG P Sbjct: 254 DANVLYALSTKLINAKVIPYYIHSLDTVSGTKHYNV--DNAKDIMKKLSEISSGFMVPVL 311 Query: 310 ILDLPGGYGKVKIDTH 325 ++PG K + H Sbjct: 312 TKEIPGYPSKKWLSFH 327 >gi|307298212|ref|ZP_07578016.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2] gi|306916298|gb|EFN46681.1| Lysine 2,3-aminomutase [Thermotogales bacterium mesG1.Ag.4.2] Length = 364 Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats. Identities = 103/326 (31%), Positives = 177/326 (54%), Gaps = 14/326 (4%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 MQ + LTS + + N EQI E+K++++ Y LIN ++P+DPI R Sbjct: 1 MQ-KPTYLTSVEKIEELN---DEQITEMKKVTDVYPFRANDYYLGLINWNDPHDPIKRII 56 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P EEL+ + D ++ ++ G+ H+Y D LL + VC +CRFCFR+ + + Sbjct: 57 LPDFEELDEWGD--LDASQEHIYTVAPGMEHKYKDTALLLVSKVCGSFCRFCFRKRLFST 114 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + V++ D + YI++ +I V+ TGGD LILS ++L +++ LR I HV I+RF Sbjct: 115 ENKEVVN--DVTLGVEYIRKHKEITNVLLTGGDSLILSTEKLGDIVRQLREIDHVGIIRF 172 Query: 181 HSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGI 235 S++ +P RI +P+L +K+ K +YI H NHP E ++EAI ++ L +AG Sbjct: 173 GSKMVAFNPYRIINDPDLPDMVKKYSTPKKRIYIMAHFNHPRELTDEAIRGLNILRDAGA 232 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 ++ +Q+ +++G+ND E++ L R + I PYY+ G + + E G +I Sbjct: 233 VICNQTPMIRGVNDSVEVMTELFRKLSFIGIPPYYVFQCRPTKGNHTYAVPAENGYEIFK 292 Query: 296 SLKEKISGLCQPFYILDLPGGYGKVK 321 + +SGL + + + GK++ Sbjct: 293 KSIDSVSGLAKRARFV-MSHATGKIE 317 >gi|283780175|ref|YP_003370930.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM 6068] gi|283438628|gb|ADB17070.1| lysine 2,3-aminomutase YodO family protein [Pirellula staleyi DSM 6068] Length = 370 Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats. Identities = 101/334 (30%), Positives = 167/334 (50%), Gaps = 20/334 (5%) Query: 7 TLTSAQDLYNANLIK--KEQIDE----------------IKEISNHYSIALTPVIANLIN 48 +L + +L A + E + + + + + + + I Sbjct: 39 SLRTLPELLEAVGLTKSPEHLAATSIAGPSGAIDPAFVPLDAAAEQFRVLVPGPYLSRIE 98 Query: 49 PHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108 NP DP+ Q +P E++ + DP+GD L G++ +Y R L+ L C V+ Sbjct: 99 RGNPADPLLLQVLPVAGEMSSPADFLTDPVGDRESERLPGLLQKYDGRALMILSGSCAVH 158 Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 CR+CFRR + L+ + A+ I + EVI +GGDPL + L ++ Sbjct: 159 CRYCFRRHYPYDETPRGLA--GWQPAIDEIAADESVQEVILSGGDPLTIVDSTLAELAHR 216 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 I H++ LR HSRVP+V P+R+N ELI ++ Y+ +H NHP E AA++ Sbjct: 217 FAEIPHLKRLRVHSRVPVVIPERVNDELIGWMRGTRLAPYMVVHINHPREIDSAVAAALA 276 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIE 288 RL +AGI++++Q+VLL+G+ND+ E L L T V +R+ PYYL D AG +HF + Sbjct: 277 RLVDAGIVVMNQAVLLRGVNDNFEALHELCETLVNMRVLPYYLSQLDRVAGAAHFLVEES 336 Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 G++++ L+ + G P Y+ ++PG K + Sbjct: 337 RGRELIEQLRASLPGYAIPRYVAEIPGRSSKSPL 370 >gi|268323643|emb|CBH37231.1| conserved hypothetical protein [uncultured archaeon] Length = 366 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 98/322 (30%), Positives = 177/322 (54%), Gaps = 11/322 (3%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 ++++ L + +++ ++EI + + + +T +L++ ++P+DPI + +P +EE Sbjct: 10 SISTIAQLGEYMELDPKKVAILQEIIDRHPMRITRYYLSLLDENDPDDPIRKMAVPSEEE 69 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 LN++ D G+ ++ + G+ H+Y L+ + C +YCR+CFR+ +VG ++ Sbjct: 70 LNLVGSY--DTSGERENTIMPGLQHKYAQTALILATNKCAMYCRYCFRKRLVGLPTKEIM 127 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + A YI+E +I V+ +GGDP ILS L + L+ L I H+ +RF +RVP+ Sbjct: 128 HRFN--GAAKYIEEHEEINNVLISGGDPFILSTVVLSEFLERLSDILHLDFIRFGTRVPV 185 Query: 187 VDPQRINPELIQCL-----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 P RI + + +Y+ NHP E + +A A+SRL AG+I+ +Q+ Sbjct: 186 TFPDRILKDDKLLTLLGNNSHENRRIYVVTQFNHPREITAKATGAVSRLIRAGVIVDNQT 245 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQKIVASLKEK 300 VLLKG+NDDPE LA L V + + PYYL S+F++ + +G +IV + KE+ Sbjct: 246 VLLKGVNDDPETLAELQNKLVSIGVIPYYLFQCRPVKRVKSYFQVPLYKGYEIVEAAKER 305 Query: 301 ISGLCQPFYILDLPGGYGKVKI 322 ++G + + + GK++I Sbjct: 306 LNGHSK-RFKYTMSHRTGKIEI 326 >gi|312213471|emb|CBX93553.1| hypothetical protein [Leptosphaeria maculans] Length = 595 Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats. Identities = 104/369 (28%), Positives = 177/369 (47%), Gaps = 34/369 (9%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQFI 61 L+H + + +D + I +K +I LTP I + ++ +NP +DPI RQF+ Sbjct: 115 LKH--IRTKEDFIR------DAISALK--LAPMAIRLTPHILSRVDWNNPLDDPIRRQFL 164 Query: 62 PQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 P K + + D + + SP+ G+VHRYP R L +CPVYCRFC R VG Sbjct: 165 PLKSGMIPDHEHMKLDSLNEEADSPVPGLVHRYPGRALFLATSICPVYCRFCTRSYAVGG 224 Query: 121 QKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 TV + E YI++ + +++ +GGD L L+++++ L I H Sbjct: 225 NTDTVAKRAQKPNRARWEVIFKYIEDNDSLQDIVLSGGDIFYLEPHLLREIVERLLSIPH 284 Query: 175 VQILRFHSRVPIVDPQRI---NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAI 224 + +R ++ V P R N + L ++ GK V + H NH E + Sbjct: 285 IFRIRLATKGLSVAPGRFLDTNDGWMDTLMDISNQGRKLGKQVCLHTHINHASEITWVTR 344 Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284 A RL G+I+ +Q+VLL G+N++P+ + L+ T + I+PYY++ D+ G R Sbjct: 345 MAARRLFAHGVIVRNQTVLLNGVNNNPDAIKELITTLANINIQPYYVYQCDMVQGIEDLR 404 Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH--NIKKVGNGSYCITDHHN 342 + E ++ ++ +SG P +++DLPGG GK + T+ ++ G Y Sbjct: 405 TPLSEILRLDKLMRGTLSGFMMPAFVIDLPGGGGKRLVSTYESYNEETGLAEYRAPGLPG 464 Query: 343 ----IVHDY 347 +++ Y Sbjct: 465 QKGEMIYRY 473 >gi|114319844|ref|YP_741527.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1] gi|114226238|gb|ABI56037.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1] Length = 348 Score = 342 bits (879), Expect = 3e-92, Method: Composition-based stats. Identities = 100/319 (31%), Positives = 155/319 (48%), Gaps = 3/319 (0%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + + ++L + + + + + + + I P +P+DP+ RQ +P Sbjct: 20 RAVRDPRELLQRLDLPMTLLPAAESAARLFPLRVPEPWLARIRPGDPDDPLLRQVLPLAA 79 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E DP+GD G++H+Y R+LL C ++CR+CFRR + Sbjct: 80 EHETPAGFTADPVGDAAAEANPGLLHKYHGRVLLITTGACAIHCRYCFRRHFPY--TESQ 137 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 D A LA++ ++ EVI +GGDPL LS +RL + + L V+ LR H+R+P Sbjct: 138 AGRDDWRATLAWLDAHPEVDEVILSGGDPLTLSDRRLATLTEALAQRPQVRRLRLHTRLP 197 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 +V P RI P L+ LK V IH+NH E A++RL AG LL+Q+VLL+ Sbjct: 198 VVLPDRITPGLMALLK-GPWEVVWVIHSNHAQELDSTVAGALARLREAGHWLLNQTVLLR 256 Query: 246 GINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLC 305 INDD + LA L R +L + PYYLH D G +HF +T + + A L ++ G Sbjct: 257 RINDDADTLAALSRQLFQLGVLPYYLHLLDRVQGAAHFEVTELRARALAAELAARLPGYL 316 Query: 306 QPFYILDLPGGYGKVKIDT 324 P + + G K + Sbjct: 317 VPRLVREEAGEPAKTPVTP 335 >gi|238502959|ref|XP_002382713.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357] gi|220691523|gb|EED47871.1| L-lysine 2,3-aminomutase, putative [Aspergillus flavus NRRL3357] Length = 593 Score = 342 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 111/360 (30%), Positives = 175/360 (48%), Gaps = 21/360 (5%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIAL--TPVIANLINP-HNPNDPIA 57 Q+R +S QD + E I ++ +A+ TP I +LIN +DPI Sbjct: 186 WQIRS---SSTQDYV----TRAEFIADVATGMKKAPMAVRLTPHILSLINWKEAYSDPIR 238 Query: 58 RQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116 RQFIP P+ + D + + + SP+KG+VHRYPD++L VCPVYCRFC R Sbjct: 239 RQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRYPDKVLFLATSVCPVYCRFCTRSY 298 Query: 117 MVGSQKGTVLSS------KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 VG Q TV K E YI ++ +V+ +GGD L +L+++ TL Sbjct: 299 SVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDVVVSGGDTFFLEPSQLREIGTTLL 358 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I H++ +RF S+ V P RI + ++ GK + + H NHP E S A +L Sbjct: 359 GIDHIRRIRFASKGLSVCPSRILDPSDEWTRK-GKNIALHTHFNHPQEISWITEHAAQKL 417 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEG 290 + + + +Q+VLL +N++ + L+R + I+PYY++ D+ G R + + Sbjct: 418 FHNAVTVRNQTVLLNKVNNNVPTMKRLIRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDI 477 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT--HNIKKVGNGSYCITDHHNI-VHDY 347 I + ++ I+G P +++DLPGG GK T + + G + VH Y Sbjct: 478 LHIESHIRGTIAGFMTPSFVVDLPGGGGKRLASTFENYDTRTGVSRFLAPGVKGNTVHQY 537 >gi|254491873|ref|ZP_05105052.1| KamA family protein [Methylophaga thiooxidans DMS010] gi|224463351|gb|EEF79621.1| KamA family protein [Methylophaga thiooxydans DMS010] Length = 335 Score = 342 bits (879), Expect = 4e-92, Method: Composition-based stats. Identities = 102/324 (31%), Positives = 155/324 (47%), Gaps = 5/324 (1%) Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q L + + +A DL + K+ + + + + + + NDP+ R Sbjct: 14 WQHALSN-AINNADDLLEKLGLSGHLQAIDKDKIRQFPLRVPQSYVDKMRYGDANDPLLR 72 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q P +E DP+GD+ GI+ +Y R LL C ++CR+CFRR Sbjct: 73 QVFPLIDEGYPAEGYLTDPVGDHLAVTSPGILQKYQGRALLLTTGACAIHCRYCFRRHFP 132 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 S + S + ++ + I EVI +GGDPL L +L K++ L I H++ L Sbjct: 133 YSDSNPLSS--QWQQSIEQLASDETISEVILSGGDPLSLHDDKLAKLVADLAEIPHLKRL 190 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R H+R+PIV P+RIN L+ ++ V + IHANH E A A+ L AG LL Sbjct: 191 RIHTRLPIVLPERINDSLLNWIQATRFKVVVVIHANHANEIDAHAEQALISLKQAGCQLL 250 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLL+GIND E L+ L ++ + PYYLH D AG HF + K+V L+ Sbjct: 251 NQTVLLRGINDSVESLSALSERLNDVDVMPYYLHLLDKVAGAQHFDVNQVRAVKLVDDLR 310 Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322 + + G P + + G K I Sbjct: 311 KVLPGYLVPRLVREQQGEASKTVI 334 >gi|88704864|ref|ZP_01102577.1| conserved hypothetical protein [Congregibacter litoralis KT71] gi|88701185|gb|EAQ98291.1| conserved hypothetical protein [Congregibacter litoralis KT71] Length = 345 Score = 342 bits (877), Expect = 7e-92, Method: Composition-based stats. Identities = 100/329 (30%), Positives = 160/329 (48%), Gaps = 4/329 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + + +L A + E++ + + + + + N DP+ RQ Sbjct: 16 WQEQLQQAIRTPSELSAALGLTLEELPYSAAADDAFPLLVPAAFVARMEKGNAWDPLLRQ 75 Query: 60 FIPQKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 + +E +DP+G+ + ++ G++ +Y R LL C V CR+CFRR Sbjct: 76 VLAVPQENLPAEGFSDDPVGETSLYADTPGVIQKYQGRALLVATGQCAVNCRYCFRRSYP 135 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 SSK+ AA+ + I EVI +GGDPL+L L + + LR L Sbjct: 136 YGDNSQ--SSKERLAAIDTLLADPSIGEVILSGGDPLLLPDASLAAIARRLRGNTRGITL 193 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R H+R+PIV P R+ LI L + V + +H+NHP E + A+ RL + G+ +L Sbjct: 194 RIHTRLPIVIPDRVTASLIDALMPREQRVVVVVHSNHPREIDHDTARALERLRDGGVTVL 253 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +QSVLLKGINDD ++LA L PYYLH D AG++HF ++ ++I+ L Sbjct: 254 NQSVLLKGINDDADVLAELSDQLFAAGAMPYYLHMLDKVAGSAHFEVSELRARQILGQLA 313 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNI 327 K G P +++PG K +I + Sbjct: 314 SKRPGYLVPKLAVEVPGADSKREIAPDYV 342 >gi|126642456|ref|YP_001085440.1| putative aminomutase [Acinetobacter baumannii ATCC 17978] Length = 280 Score = 341 bits (876), Expect = 7e-92, Method: Composition-based stats. Identities = 101/276 (36%), Positives = 149/276 (53%), Gaps = 2/276 (0%) Query: 47 INPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCP 106 +N +P DP+ Q +P EL PE DP+G+ + L G++H+Y R LL L C Sbjct: 1 MNAKDPLDPLLLQVLPHHLELEEHPEFVTDPLGEEAANQLPGVLHKYKSRFLLTLTGACA 60 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 V+CR+CFRR + + ++D YI+ I EVI +GGDPL LS+++L L Sbjct: 61 VHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIESNPDINEVILSGGDPLTLSNRKLALWL 118 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 + L +K V+ILR HSRVPIV P RI+ ELI LK + + + +H+NH E + + Sbjct: 119 ERLSSLKQVKILRIHSRVPIVIPNRIDEELISLLKNSRLRIILVVHSNHASELDDFTCSK 178 Query: 227 ISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 + +L+ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G HF L Sbjct: 179 LLQLSEHHITVLNQAVLLKGVNDSAQTLTDLSYRLFEARVMPYYLHVLDKVKGAQHFDLI 238 Query: 287 IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 E I + + G P + ++ G K + Sbjct: 239 PSEIDAIYQDVLASLPGYLVPKLVREIAGEKNKTPL 274 >gi|256827853|ref|YP_003156581.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium baculatum DSM 4028] gi|256577029|gb|ACU88165.1| lysine 2,3-aminomutase YodO family protein [Desulfomicrobium baculatum DSM 4028] Length = 520 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 103/354 (29%), Positives = 172/354 (48%), Gaps = 13/354 (3%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QLRH + + L + + I+++ ++ Y + LTP A+LI P NDP+ Q + Sbjct: 158 QLRH-AIEDVETLSKVVDLPAKAIEDVLRVTRTYRMRLTPYYASLILPGQVNDPVLLQAV 216 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E ++ E P +HSP + I YP + +K ++C +YC C R +G+ Sbjct: 217 PTGEMVDNAGVEI--PPVAADHSPARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIGA- 273 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 K + + AL YI+ +I +V+ TGGD L+L + L+ +L L I+HV++ R Sbjct: 274 KDRLYGKEAYGEALEYIRANPEIRDVLITGGDSLVLPNSMLEWLLGQLDAIEHVRMKRLG 333 Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +R+P+ PQRI+ EL+ L+ + KP+ + N E + + AA ++ +++ Sbjct: 334 TRIPVTTPQRIDSELLDILEASSDKKPLRVVTQINTAQEITPVSKAAFQAISKRVAAVMN 393 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP--DLAAGTSHFRLTIEEGQKIVASL 297 Q+VLLKGIND + L T E ++PYY+ + H R+ + GQ I+ S+ Sbjct: 394 QAVLLKGINDSSVKMWKLCETIQEAYVRPYYVFNCSYRNPQF-KHLRVPVAVGQSIIESM 452 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD-HHNIVHDYPPK 350 ISG P Y + GK+ + N+ + G G + YP Sbjct: 453 YGNISGDAIPRY---IATAGGKIPLHRTNVLEHGQGYVKMQKPWSGEQVSYPDP 503 >gi|153875802|ref|ZP_02003435.1| Protein of unknown function DUF160 [Beggiatoa sp. PS] gi|152067734|gb|EDN66565.1| Protein of unknown function DUF160 [Beggiatoa sp. PS] Length = 334 Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats. Identities = 99/317 (31%), Positives = 161/317 (50%), Gaps = 8/317 (2%) Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q LR + + + L I + Q+ + H+ + + + +PNDP+ R Sbjct: 16 WQDELR-QAIHNPLHLLELLEIAESQLAHRLMVQPHFKLQVPKGYVARMQKGDPNDPLLR 74 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q +P +E + DP+GD+ + G++ +Y RIL C ++CR+CFR+ Sbjct: 75 QVLPLIDEQKQVLGFGVDPVGDSAAEKVPGLLQKYQGRILWLTTTACAIHCRYCFRQHYP 134 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 S+ + L I+ + I EVI +GGDPL+L L ++ K+L I VQ L Sbjct: 135 TSKTKLY-----YQRVLDTIRADTSITEVILSGGDPLMLLDSDLAEMAKSLADIPQVQRL 189 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R H+R+PIV P R+N EL+ L E + + +HANH E E +A+ +L AGI +L Sbjct: 190 RLHTRLPIVLPTRVNNELLTWLTETRLQLIVVVHANHANEIDNEVKSALQKLVTAGITVL 249 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +QSVLL+GIND+ L L + R+ PYYLH D G +HF + + +++ ++ Sbjct: 250 NQSVLLRGINDNATALMALSEILFDSRVLPYYLHVLDRVQGAAHFEVPEQTALELLEKMR 309 Query: 299 EKISGLCQPFYILDLPG 315 + G P + ++ G Sbjct: 310 VALPGYLVPKLVREVTG 326 >gi|163783207|ref|ZP_02178201.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1] gi|159881541|gb|EDP75051.1| hypothetical protein HG1285_14324 [Hydrogenivirga sp. 128-5-R1-1] Length = 375 Score = 340 bits (874), Expect = 1e-91, Method: Composition-based stats. Identities = 114/375 (30%), Positives = 189/375 (50%), Gaps = 37/375 (9%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 MQ + K + + +K + +E+K++++ ++ +LIN +P DPI R Sbjct: 1 MQKKVKYIIKLDLIPQ---LKDREKEELKQVTDKFAFRTNDYYNSLINWDDPEDPIRRIV 57 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 IP EEL++ + ++ + + G+ H+YPD LL + VC +YCRFCFR+ + + Sbjct: 58 IPTTEELDV--WGKLHASNESKYMKVHGLEHKYPDTALLLVTDVCGIYCRFCFRKRLFMN 115 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 V +D L YI+ +I V+ TGGDPL+L+ +L+K LK L I HV+I+R Sbjct: 116 DNDEVA--RDVSEGLEYIRNHPEINNVLLTGGDPLVLATFKLEKTLKALAEIPHVRIVRI 173 Query: 181 HSRVPIVDPQRI--NPELIQCLK----EAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 S++ V+P R+ +P L++ + E GK +Y+ H NHP E ++EA A+ + G Sbjct: 174 GSKMLAVNPFRVIDDPSLLELFEWFNTETGKKLYLMNHFNHPRELTKEARKAVELVQKTG 233 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 L +Q+ +LKGIND+ E L L+ + + PYY+ AG + IEE +V Sbjct: 234 TTLTNQTPILKGINDNEETLRELLEELSFMGVPPYYVFQCRPTAGNKTYSTKIEETIDLV 293 Query: 295 ASLKEKISGLCQP-FYILDLPGGYGKVKI----------------DTHN-----IKKVGN 332 S++ K+SGL Y+ + GK++I D N I K Sbjct: 294 ESVRSKVSGLAARVRYV--MSHETGKIEILGKGSDLIFFRYHRAADPENAGKFMIYKRNP 351 Query: 333 GSYCITDHHNIVHDY 347 ++ D+ +V +Y Sbjct: 352 DAHWFDDYKELVEEY 366 >gi|254498454|ref|ZP_05111183.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12] gi|254352309|gb|EET11115.1| L-lysine 2,3-aminomutase [Legionella drancourtii LLAP12] Length = 328 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 111/324 (34%), Positives = 159/324 (49%), Gaps = 6/324 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + +S L N + + + E +S + A + NP DP+ Q Sbjct: 8 WQKKLAQGFSSVAALLNYLELPCDAGSLLAE--KQFSSRIPLGFAQRMQKGNPQDPLLLQ 65 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + EL I DP+ + + +PLKG++H+Y R+LL L VC V CRFCFRR Sbjct: 66 VLAVATELEIQDGYEFDPLRERDSNPLKGLIHKYHGRVLLTLTGVCAVNCRFCFRRHFPY 125 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + AYI + S I EVI +GGDPL+ S ++L+ L I HV +R Sbjct: 126 --QDNNPGRHGFKDICAYIAKDSSITEVILSGGDPLLASDLVFSELLQQLEQIPHVHTVR 183 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILL 238 FH+R+PIV P+RI+ L+ L I +H NHP E +E A+ L AG LL Sbjct: 184 FHTRIPIVFPERIDHGLLCVLATTKLKKVIVLHCNHPQELNDDEVRHALRALRQAGCHLL 243 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Q+VLL GIND+ ILA L + + PYYLH D G +HF L + Q I L+ Sbjct: 244 NQTVLLSGINDNAPILAALSQALFAQDVIPYYLHILDKVKGAAHFDLPLATVQTIYQQLQ 303 Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322 + + G P + PG K + Sbjct: 304 QLVPGYLLPRLACEEPGKLSKTLL 327 >gi|298528428|ref|ZP_07015832.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512080|gb|EFI35982.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 370 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 96/362 (26%), Positives = 172/362 (47%), Gaps = 32/362 (8%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72 D+ + ++++ + + + +L+N +P+DPI R IP +EL+ Sbjct: 9 DINKVPGLTGRDLEQLAPVMDTFEFRSNEYYLSLVNWDDPDDPIRRIIIPSVQELDQ--W 66 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDT 131 R D + ++S L G+ H+Y + C +CR+CFR+ + ++ VL+ D Sbjct: 67 GRLDASNEQSYSVLPGLQHKYVSTAVFLASDACGGFCRYCFRKRLFIHPEQREVLT--DL 124 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 +AA Y++ +I V+ TGGD L+LS RL+K++ LR I HV+I+R +++ P R Sbjct: 125 DAACDYVRNHPEINNVLITGGDGLMLSTSRLEKIISRLRGIDHVKIIRIGTKLLSYSPYR 184 Query: 192 I--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 + + EL++ +K+ P +Y H HP E ++ ++ A RL AG IL +Q+ +L+G Sbjct: 185 VLNDQELLEMVKKYSLPDKRIYFMTHYTHPREMTDVSLEACDRLIKAGGILCNQTPMLRG 244 Query: 247 INDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ 306 +NDDP++L L + + PYY+ G + + +EE + + + SGL + Sbjct: 245 VNDDPQVLGELFNRLSYMGVAPYYIFICRPTVGNKPYAVPVEEAFNVYQNARSMCSGLGK 304 Query: 307 PFYILDLPGGYGKVK----------------IDTH-----NIKKVGNGSYCITDHHNIVH 345 L + GK++ D +I +Y D+ IV Sbjct: 305 RAK-LAMSHASGKIEALAMTDENIIFRYHRAADPDESGKVHICTRNPRAYWFDDYKEIVE 363 Query: 346 DY 347 Y Sbjct: 364 TY 365 >gi|13474986|ref|NP_106545.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099] gi|14025732|dbj|BAB52331.1| L-lysine 2,3-aminomutase [Mesorhizobium loti MAFF303099] Length = 427 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 112/374 (29%), Positives = 176/374 (47%), Gaps = 25/374 (6%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQ--IDEIKEISNHYSI--ALTPVIANLINPHN-PNDP 55 Q H +T L + I +++ + +TP + NLI+ N DP Sbjct: 18 WQ-DHHAVTRVDQLREWMGADADGNLIRDVERGLARAPMALRITPYLLNLIDWSNFLEDP 76 Query: 56 IARQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 I +QFIP EL P + D + + SP+ G+VHRY D++LL CPVYCRFC R Sbjct: 77 IRKQFIPVGSELLPSHPLLKMDSLHERKSSPVDGLVHRYKDKVLLLATDRCPVYCRFCTR 136 Query: 115 REMVGSQKGTVLSSK------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 VG +VL K + LAY++ I +V+ +GGD L RL + Sbjct: 137 SYSVGLDTQSVLKKKVSPFQSRWDTILAYLRVTPVIADVVVSGGDCFRLKPSRLLAIGMG 196 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPE--LIQCL-------KEAGKPVYIAIHANHPYEF 219 L I ++ +RF ++ V P +I + L ++ G + H NHP E Sbjct: 197 LLSIPSIRRIRFATKGLAVLPMKITSDHKWTDALVNISDAGRDQGVEISFHTHFNHPREI 256 Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279 ++ IAA L GI + +QSVL+ G+NDDPE++ L++ +L I+PYY++ DL G Sbjct: 257 TDYTIAAAELLFKRGIRMRNQSVLMAGVNDDPEVMKQLVKKLSDLHIQPYYVYTCDLVDG 316 Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT--HNIKKVGNGSYCI 337 H R ++ +I +++ +G P +++D PGG GK + + H + G Y Sbjct: 317 IEHMRCSVRLACQIEKAVRGITAGYNTPLFVVDTPGGGGKRDVHSFEHYNTQTGLAVYRA 376 Query: 338 TDHH-NIVHDYPPK 350 + + YP Sbjct: 377 LSVRPDQLFTYPDP 390 >gi|262193506|ref|YP_003264715.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum DSM 14365] gi|262076853|gb|ACY12822.1| lysine 2,3-aminomutase YodO family protein [Haliangium ochraceum DSM 14365] Length = 473 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 94/354 (26%), Positives = 170/354 (48%), Gaps = 22/354 (6%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55 Q ++ ++T L A ++ + D++ + ++P + +LI+ +P DP Sbjct: 57 WQAKN-SITKPAKLLAALQEIVPQSFYDDVAAGFRKSPMSVRVSPYLLSLIDWDHPYEDP 115 Query: 56 IARQFIPQKEEL-NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 + QFIP L P+ D + + +P+ G+ HRY D+ L L CPVYCRFC R Sbjct: 116 LRTQFIPLGSRLTQDHPKLSFDSLHEQADAPVPGLTHRYVDKALFLTLDTCPVYCRFCTR 175 Query: 115 REMVGSQKG------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 VG + A Y+ + ++ +++ +GGD L ++++ + +T Sbjct: 176 SYAVGIDTEDVEKVSLKAREDRWDQAFRYVAARPELEDIVISGGDSYQLKARQIRHIGET 235 Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEF 219 L + +++ +RF ++ P V PQ++ + E + L ++ K V + H NHP E Sbjct: 236 LLGMDNIRRIRFATKGPAVMPQKLITDTEWLDALTGIVELGRKLHKEVALHTHFNHPNEI 295 Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279 + A+ L GI + +QSVL +G+ND E + L++ L ++PYY++ D+ G Sbjct: 296 TAITKQAMDILFERGITVRNQSVLQRGVNDTVETMQLLVKRLSYLNVQPYYVYMHDMVKG 355 Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 R TI+ G I ++ +G P +++D PGG GK I ++ G Sbjct: 356 VEDLRTTIQTGLDIEKHVRGITAGFNTPTFVVDAPGGGGKRAIHSYEYYDRDAG 409 >gi|149194496|ref|ZP_01871592.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus TB-2] gi|149135240|gb|EDM23720.1| lysine 2,3-aminomutase related protein [Caminibacter mediatlanticus TB-2] Length = 414 Score = 339 bits (871), Expect = 3e-91, Method: Composition-based stats. Identities = 94/377 (24%), Positives = 163/377 (43%), Gaps = 40/377 (10%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQ 59 M+ + ++ S + L + KE I+ IK +S + + IA+L++ N +DPI R Sbjct: 1 MRYKSYSVKSFEKLPFVRKMDKEDIENIKVVSKIFPFKINEYIASLVDWDNYKDDPIFRL 60 Query: 60 FIPQKEEL------------------------NILPEEREDPIGDNNHSPLKGIVHRYPD 95 P K+ L N P + + I + N L+G H+Y + Sbjct: 61 IFPHKDMLDSKDFEKLKNSNDEKLIYDIRMKLNPHPAGQMENIPEINGKRLEGSQHKYKE 120 Query: 96 RILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 IL C YC FCFR +SK+ E + YI+ I +V+FTGGD Sbjct: 121 TILFFPKQGQTCHAYCSFCFRWPQFIGINELKFASKEVEILIEYIKANPTITDVLFTGGD 180 Query: 154 PLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP-----ELIQCLK---EA 203 PL++S K L+ +K L I H++ +R ++ P R EL+ K ++ Sbjct: 181 PLVMSTKLLKAYIKPLIEAKIPHLKNIRIGTKALSFWPYRFLTDEDANELLDLFKYIVDS 240 Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 G + H NH E ++E A+ ++ + G I+ +QS LL+ IND ++ + + V Sbjct: 241 GYHLAFMAHFNHYKELQTDEVKEAVKKILSTGAIIRTQSPLLRHINDSSKVWEIMWKEQV 300 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 L + PYY+ +F L + + +I +SGL + + GK+ + Sbjct: 301 ALNMIPYYMFVARDTGAKRYFELPLSKAWEIYKGAISNVSGLARTVRGPSMSAKPGKIAV 360 Query: 323 DTHNIKKVGNGSYCITD 339 + ++ N + + Sbjct: 361 V--GVSEINNEKVFVLN 375 >gi|87310204|ref|ZP_01092336.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645] gi|87287194|gb|EAQ79096.1| L-lysine 2,3-aminomutase [Blastopirellula marina DSM 3645] Length = 346 Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats. Identities = 101/323 (31%), Positives = 167/323 (51%), Gaps = 3/323 (0%) Query: 1 MQLRHKT-LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q K L +L + + + ++ + + + A + +P+DP+ Q Sbjct: 25 WQNAMKAALRDPAELCRLLQLPEACSEAAIAAASDFPLFVPREFAAKMTLGDPHDPLLVQ 84 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P EL+ DP+GD+ G++ +Y R LL C V+CR+CFRR Sbjct: 85 VLPVLRELDSPQGFTVDPVGDDQAVLTPGLLQKYAGRALLVTTGACAVHCRYCFRRHFPY 144 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 ++ + ++ A+A + I EV+ +GGDPL L+ L ++ + L I H++ +R Sbjct: 145 AEVPSGVA--AWSDAIAALAADPSIQEVLLSGGDPLTLADATLAQLAQQLAAIPHLRRIR 202 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PI+ PQRIN +L+ L + IHANHP E +AAI RL AG+++L+ Sbjct: 203 VHTRLPIMIPQRINDQLLSWLVGTRLTPIVVIHANHPRELDLPVVAAIDRLNQAGVMVLN 262 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL G+NDD ++LA L ++ R+ PYYLH D G +HF + E G ++ L+ Sbjct: 263 QAVLLAGVNDDVDVLAELSERLIDQRVTPYYLHQLDRVKGAAHFEVPRERGVDLIRQLRA 322 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 ++ G P Y+ ++ G K I Sbjct: 323 RLPGYAVPRYVEEIAGQPNKTII 345 >gi|124431233|gb|ABN11266.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis] Length = 223 Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats. Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 HRYPDR+LL + + CP+YCR C R+ VG T+ + + YI+ Q+ +V+ Sbjct: 1 THRYPDRVLLLVSNTCPMYCRHCTRKRRVGD-NDTIPNKSAILQGIDYIRNTPQVRDVLL 59 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDP +LS L +L LR I HV+I+R +R P+V P RI PEL LK+ KPV++ Sbjct: 60 SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 H NHP E ++ A A+ LA+AGI L +Q+VLL GIND P I+ L+ R++PY Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 YL+ DL+ G SHFR + +G +I+ SL SG C P Y++D P Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223 >gi|162450720|ref|YP_001613087.1| lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56'] gi|161161302|emb|CAN92607.1| Lysine 2,3-aminomutase [Sorangium cellulosum 'So ce 56'] Length = 461 Score = 338 bits (868), Expect = 6e-91, Method: Composition-based stats. Identities = 101/371 (27%), Positives = 173/371 (46%), Gaps = 25/371 (6%) Query: 1 MQLRHKTLTSAQDLYNA--NLIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDP 55 Q + K++T L + ++ + I + E + ++P + +LI+ ++P DP Sbjct: 59 WQAK-KSITRPDKLLDTLRGMVSDDFIRDATEGFARAPMSVRVSPYMLSLIDWNDPYGDP 117 Query: 56 IARQFIPQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 + QFIP L P+ D + + +P+ G+ HRY D+ L L CPVYCRFC R Sbjct: 118 LRTQFIPLASRFLPDHPKLGLDSLHERADAPVPGLTHRYADKALFLPLDTCPVYCRFCTR 177 Query: 115 REMVGSQKGTVLS------SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 VG V + + A AYI + ++ +++ +GGD L ++L + +T Sbjct: 178 SYAVGIDTEEVEKTHFKVDEERWKRAYAYIASRPELEDIVVSGGDAYNLRPEQLGAIGET 237 Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL-------KEAGKPVYIAIHANHPYEF 219 L + ++Q +R ++ P V PQ+I + E I + ++ K V I H NHP E Sbjct: 238 LLRMPNIQRIRLATKGPAVMPQKILTDDEWIDAVTRTVELGRKLHKEVVIHTHFNHPNEI 297 Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279 + A+++L GI + +QSVL +G+ND PE + L++ + + PYY++ DL G Sbjct: 298 TGVTRDAMNKLFERGITVRNQSVLQRGVNDTPETMKLLVKRLGHVHVHPYYVYIHDLVRG 357 Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339 R T+ G I ++ +G P +++D PGG GK + G Sbjct: 358 VEDLRTTLATGLTIEKHVRGSTAGFNTPTFVVDAPGGGGKRDAHSFEHYDRTTGISVFEA 417 Query: 340 HH---NIVHDY 347 + Y Sbjct: 418 PSVKPGQRYTY 428 >gi|156050603|ref|XP_001591263.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980] gi|154692289|gb|EDN92027.1| hypothetical protein SS1G_07889 [Sclerotinia sclerotiorum 1980 UF-70] Length = 531 Score = 337 bits (866), Expect = 1e-90, Method: Composition-based stats. Identities = 106/358 (29%), Positives = 180/358 (50%), Gaps = 28/358 (7%) Query: 18 NLIKKEQ-IDEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIPQKE-ELNILPE 72 +I +E I+++KE +++ P I ++I+ NP +DPI RQFIP K +L P+ Sbjct: 159 GIITREDFIEDVKEGIKLAPMSIRLPPHILSIIDWENPFDDPIRRQFIPMKSSKLEDHPK 218 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------L 126 D + +++ SP++G VHRY D+ L CP+YCRFC R +G V Sbjct: 219 VELDSLHESDDSPVEGFVHRYYDKALFLATSQCPLYCRFCTRSWSIGPDMQNVKKTTFKP 278 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K E YI++ Q+ +++ +GGD IL+ + ++ + + L I H++ RF ++ Sbjct: 279 QRKRWEDIFTYIEDTPQLQDIVVSGGDCYILTAENIRLIGERLISIPHIKRFRFATKGLA 338 Query: 187 VDPQRINPE----------LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 V P RI + L K+AGK + I H NHP E + + A+ RL + Sbjct: 339 VSPARILDDSDGWAAEMIRLSALAKKAGKSMAIHTHFNHPREMTWVSRMALQRLHENNVT 398 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 + +Q+VLLKG+NDD ++NL++T + I PYY++ D+ R + ++ Sbjct: 399 VRNQTVLLKGVNDDVATMSNLIKTVADNNIIPYYVYQADMVQYVEDLRTPLSTILQLERH 458 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347 ++ I G P +++DLPGG GK ++ G ++ + N V++Y Sbjct: 459 IRGSIGGFVTPNFVVDLPGGGGKRLAASYDSYDPITGRSTFTAPAVTGKNKENRVYEY 516 >gi|189200174|ref|XP_001936424.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187983523|gb|EDU49011.1| L-lysine 2,3-aminomutase [Pyrenophora tritici-repentis Pt-1C-BFP] Length = 443 Score = 336 bits (863), Expect = 2e-90, Method: Composition-based stats. Identities = 102/335 (30%), Positives = 170/335 (50%), Gaps = 22/335 (6%) Query: 35 YSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHR 92 +I LTP + +L++ P +DPI +QF+P + + D + + + SP+ G+VHR Sbjct: 30 MAIRLTPHVLSLVDWTKPLDDPIRKQFLPLRSGIIPDHKHLELDSLHEEDDSPVPGLVHR 89 Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKSQIWE 146 YP R L +CPVYCRFC R VG+ TV S K E +I++ + + Sbjct: 90 YPGRALFLATSICPVYCRFCTRSYAVGANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQD 149 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL--- 200 ++ +GGD L +++++ L I H++ +R S+ V P RI + L Sbjct: 150 IVVSGGDAYFLQPDHVKEIVYRLLNIPHIRRIRLASKGLAVAPGRILDDADPWTDALIEV 209 Query: 201 ----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 +E GK V + H NH E + A ++L G+I+ +QSVLLKG+N+ + L + Sbjct: 210 SNKGREMGKQVCLHTHINHANEITWITRLAANKLFKHGVIVRNQSVLLKGVNNHKDTLLD 269 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L++T ++ I+PYY++ D+ G R ++E + L+ K+SG P +++DLPGG Sbjct: 270 LIKTLADMNIQPYYVYQCDMVQGIEDLRTPLQEIIDLDKELRGKLSGFMMPSFVIDLPGG 329 Query: 317 YGKVKIDTHNIKKVGNGSYCITDHHNI----VHDY 347 GK + T + G +Y + V+ Y Sbjct: 330 GGKRLVSTMESYQNGEATYRAPGLPGVKGEMVYRY 364 >gi|317148225|ref|XP_001822598.2| L-lysine 2,3-aminomutase [Aspergillus oryzae RIB40] Length = 453 Score = 336 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 109/349 (31%), Positives = 169/349 (48%), Gaps = 23/349 (6%) Query: 22 KEQIDEIKEISNHYSIAL--TPVIANLINP-HNPNDPIARQFIPQKEELNI-LPEEREDP 77 E I ++ +A+ TP I +LIN +DPI RQFIP P+ + D Sbjct: 91 AEFIADVATGMKKAPMAVRLTPHILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDS 150 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDT 131 + + + SP+KG+VHRYPD++L VCPVYCRFC R VG Q TV K Sbjct: 151 LHETHDSPVKGLVHRYPDKVLFLATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYW 210 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 E YI ++ +V+ +GGD L +L+++ TL I H++ +RF S+ V P R Sbjct: 211 EPMFEYIARTPEVTDVVVSGGDTFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSR 270 Query: 192 I---NPELIQCL-------KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 I + E + L +E GK + + H NHP E S A +L + + + +Q+ Sbjct: 271 ILDPSDEWTRVLIEISNRGREKGKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQT 330 Query: 242 VLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 VLL +N++ + L+R + I+PYY++ D+ G R + + I + ++ I Sbjct: 331 VLLNKVNNNVPTMKRLIRKLADNNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTI 390 Query: 302 SGLCQPFYILDLPGGYGKVKIDTH--NIKKVGNGSYCITDHHNI-VHDY 347 +G P +++DLPGG GK T + G + VH Y Sbjct: 391 AGFMTPSFVVDLPGGGGKRLASTFESYDTRTGVSRFLAPGVKGNTVHQY 439 >gi|330906439|ref|XP_003295474.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1] gi|311333210|gb|EFQ96428.1| hypothetical protein PTT_01221 [Pyrenophora teres f. teres 0-1] Length = 526 Score = 336 bits (863), Expect = 3e-90, Method: Composition-based stats. Identities = 108/353 (30%), Positives = 177/353 (50%), Gaps = 28/353 (7%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP-NDPIARQF 60 QLR + + D +E + IK +I LTP + +L++ P +DPI +QF Sbjct: 90 QLRR--IRTKDDFI------EEAVAAIK--LAPMAIRLTPHVLSLVDWTKPLDDPIRKQF 139 Query: 61 IPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P + + D + + + SP+ G+VHRYP R L +CPVYCRFC R VG Sbjct: 140 LPLRSGIIPDHKHLELDSLHEEDDSPVPGLVHRYPGRALFLATSICPVYCRFCTRSYAVG 199 Query: 120 SQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173 + TV S K E +I++ + +++ +GGD L +++++ L I Sbjct: 200 ANTDTVSKKPQKPSRKRWEVVFQHIEKDETLQDIVVSGGDAYFLQPDHVKEIVYRLLNIP 259 Query: 174 HVQILRFHSRVPIVDPQRINPE---LIQCL-------KEAGKPVYIAIHANHPYEFSEEA 223 H++ +R S+ V P RI + L +E GK V + H NH E + Sbjct: 260 HIRRIRLASKGLAVAPGRILDDADPWTDALIEVSNKGREMGKQVCLHTHINHANEITWIT 319 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283 A ++L G+I+ +QSVLLKG+N+ + L +L++T ++ I+PYY++ D+ G Sbjct: 320 RLAANKLFKHGVIVRNQSVLLKGVNNHKDTLLDLIKTLADINIQPYYVYQCDMVQGIEDL 379 Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336 R ++E + L+ K+SG P +++DLPGG GK + T K G +Y Sbjct: 380 RTPLQEIIDLDKDLRGKLSGFMMPSFVIDLPGGGGKRLVSTVESYKNGEATYR 432 >gi|171680131|ref|XP_001905011.1| hypothetical protein [Podospora anserina S mat+] gi|170939692|emb|CAP64918.1| unnamed protein product [Podospora anserina S mat+] Length = 491 Score = 335 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 102/342 (29%), Positives = 167/342 (48%), Gaps = 25/342 (7%) Query: 31 ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKEELNI-LPEEREDPIGDNNHSPLKG 88 + +I +TP I + +N NP +DPI RQF+P K L P+ D + + SP+KG Sbjct: 141 AAATMAIRMTPYILSRVNWENPRHDPIIRQFLPLKSVLIPDHPKLALDSLHEEADSPVKG 200 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV------LSSKDTEAALAYIQEKS 142 +VHRY D+ L VCP YC FC R VG+ TV + + E A AYI+ Sbjct: 201 LVHRYSDKALFLPTSVCPTYCMFCTRSYAVGADTDTVTKASLKPTRRRWEEAFAYIENTP 260 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQC 199 + +++ +GGD L +L+ + L + +++ RF S+ V P RI E + Sbjct: 261 ALQDIVVSGGDSYYLQPDQLRMIGDRLIGMPNIKRFRFASKGLAVAPSRILDESDGWVNA 320 Query: 200 LKEAGKPVY-------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 L + H NHP E S + A +L G+++ +Q+VLL+G+NDD + Sbjct: 321 LIDISNKAKKAGKAVAWHTHFNHPNEISWISKDASQKLFEEGVMVRNQTVLLRGVNDDVD 380 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 ++ L+R + ++ PYY++ D+ H R ++ + A ++ I+G P +++D Sbjct: 381 TMSKLIRDLADNKVFPYYVYQCDMVERVEHLRTPLQTILDLEARIRGSIAGFMMPQFVVD 440 Query: 313 LPGGYGKVKIDTH--NIKKVGNGSYCI-----TDHHNIVHDY 347 LP G GK ++ K G +Y D N V++Y Sbjct: 441 LPAGGGKRLACSYESYDPKTGLSTYMAPAVTGRDKENKVYEY 482 >gi|124431231|gb|ABN11265.1| putative lysine-2,3-aminomutase [Prosthecochloris vibrioformis] Length = 223 Score = 335 bits (861), Expect = 4e-90, Method: Composition-based stats. Identities = 98/225 (43%), Positives = 138/225 (61%), Gaps = 2/225 (0%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 HRYPDR+LL + + CP+YCR C + VG K T+ + + YI+ Q+ +V+ Sbjct: 1 THRYPDRVLLLVSNTCPMYCRHCTSKRCVGD-KDTIPNKSAILQGIDYIRNTPQVRDVLL 59 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GGDP +LS L +L LR I HV+I+R +R P+V P RI PEL LK+ KPV++ Sbjct: 60 SGGDPFLLSDDYLDWILTELRSIDHVEIIRIGTRTPVVLPYRITPELTAILKKH-KPVWV 118 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 H NHP E ++ A A+ LA+AGI L +Q+VLL GIND P I+ L+ R++PY Sbjct: 119 NTHFNHPREITQSARTALDMLADAGIPLGNQTVLLSGINDCPRIMKALVHQLTRNRVRPY 178 Query: 270 YLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 YL+ DL+ G SHFR + +G +I+ SL SG C P Y++D P Sbjct: 179 YLYQCDLSEGLSHFRTPVGKGIEILESLIGHTSGFCVPTYVVDAP 223 >gi|291280226|ref|YP_003497061.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1] gi|290754928|dbj|BAI81305.1| lysine 2,3-aminomutase [Deferribacter desulfuricans SSM1] Length = 519 Score = 335 bits (860), Expect = 5e-90, Method: Composition-based stats. Identities = 98/355 (27%), Positives = 176/355 (49%), Gaps = 14/355 (3%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL+ + + L + ++ I ++ ++ HY + LTP A+LI P N NDP+ Q + Sbjct: 155 QLK-FAIEDVETLSKIIDLPEKAITDVLRVTKHYRMRLTPYYASLIMPGNINDPVLLQSV 213 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E ++ + E P +HSP + I YP + +K ++C +YC C R +G + Sbjct: 214 PTGEMVDNVGVEI--PPVAADHSPARLIDQFYPRVVTIKSTNMCAMYCTHCLRIAHIG-K 270 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 K + + K AL YI+ I +V+ TGGD +L + ++ +L+ L I HV++ R Sbjct: 271 KDRIYNKKAYLEALEYIKNNKNIRDVLVTGGDAFVLPNSLIRWILEELDKIDHVKMKRLG 330 Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +R+P+ PQR++ EL+ L+E+ KP+ + N E + + +++ +L+ Sbjct: 331 TRIPVTTPQRVDQELLDILEESNDKKPLRVVTQINTAQEITPISKEVFKQISKRVSAVLN 390 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP--DLAAGTSHFRLTIEEGQKIVASL 297 Q+VLL+GIND + L T E ++PYY+ + +H R+ ++ GQ I+ + Sbjct: 391 QAVLLRGINDSKVKMWKLCETIQEAYVRPYYVFNCSYRNPQF-AHMRVPVQVGQDIIEGM 449 Query: 298 KEKISGLCQPFYILDLPGGYGKVKIDTHNIKK-VGNGSYCITD-HHNIVHDYPPK 350 ISG P Y + GK+ + N+ + +G+ + + YP Sbjct: 450 YGNISGDAIPRY---IATAGGKIPLHRTNVVEFAEDGNIILRKPWSGEIVKYPDA 501 >gi|254516177|ref|ZP_05128237.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium NOR5-3] gi|219675899|gb|EED32265.1| lysine 2,3-aminomutase YodO family protein [gamma proteobacterium NOR5-3] Length = 345 Score = 335 bits (859), Expect = 9e-90, Method: Composition-based stats. Identities = 97/326 (29%), Positives = 165/326 (50%), Gaps = 4/326 (1%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QL++ + + DL A I E + + + + A I N DP+ RQ + Sbjct: 19 QLQN-AIRTPTDLAAAVGIALEDLPYSLAADRGFPLLVPRAFAARIERGNVADPLLRQIL 77 Query: 62 PQKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 ++E I+ +DP+ + + ++ G++ +Y R LL + C + CR+CFRR+ + Sbjct: 78 AAQDETRIVTGYSKDPLAETSLYAGTPGLLQKYTGRALLVVTGQCAINCRYCFRRDYPYA 137 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 SS + A + + + I E+I +GGDPL+L +++ + + + + LR Sbjct: 138 DNAQ--SSAERLATIDRLLDDPSIGEIILSGGDPLLLPDEQIAAMARRIARHQRSVTLRI 195 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 H+R+P+V P+R+ LIQ L E G P + +H+NHP E AI L AG +L+Q Sbjct: 196 HTRLPMVIPERVTDSLIQALSERGLPSVMVLHSNHPNEIDAPTAHAIKSLREAGTTVLNQ 255 Query: 241 SVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 SVLL G+ND PE+LA+L PYY+H D AG +HF ++ + ++I+ L Sbjct: 256 SVLLAGVNDKPEVLAHLSDRLFAAGALPYYIHMLDKVAGAAHFEVSEDSARRIMGELSGM 315 Query: 301 ISGLCQPFYILDLPGGYGKVKIDTHN 326 G P +++ PG K +++ Sbjct: 316 RPGYLVPRLVIERPGAGSKQQLEPIY 341 >gi|117924254|ref|YP_864871.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1] gi|117608010|gb|ABK43465.1| L-lysine 2,3-aminomutase [Magnetococcus sp. MC-1] Length = 305 Score = 333 bits (854), Expect = 3e-89, Method: Composition-based stats. Identities = 100/291 (34%), Positives = 155/291 (53%), Gaps = 3/291 (1%) Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92 + + LTP +A+ + DPI RQF P EEL P DP+ + SP+ G+VH+ Sbjct: 16 RGFPMLLTPTMADCMRQPQEQDPIYRQFWPSAEELQNPPHYTTDPLQEAASSPMPGLVHK 75 Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y R LL L CPV+CR+CFRR + + + + + ++ + + E+I +GG Sbjct: 76 YQGRALLHLTDACPVHCRYCFRRH---GAITSPMDPQAEQQLVDHLAQDHTLQEIILSGG 132 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 DPL+L+ + + L + H+Q +R HSRVP+ DP R+ +++ L+ K V + IH Sbjct: 133 DPLMLNAPKWHWWMTQLAQLPHLQRIRIHSRVPVADPSRLTIPMLETLQNTAKSVVLVIH 192 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 NH E + + A+ AG ++L+QSVLL G+ND EILA L V L + PYYLH Sbjct: 193 CNHAQELTPASEVALQACRQAGFLVLNQSVLLAGVNDSAEILAKLNLALVGLGVLPYYLH 252 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 D G +HF ++ + +I+ L + + G P + + P GK I Sbjct: 253 LLDTVQGAAHFEVSPQRAMEIMRQLHQCLPGYALPKLVRERPELPGKEPIH 303 >gi|119946889|ref|YP_944569.1| lysine 2,3-aminomutase YodO family protein [Psychromonas ingrahamii 37] gi|119865493|gb|ABM04970.1| L-lysine 2,3-aminomutase [Psychromonas ingrahamii 37] Length = 337 Score = 332 bits (853), Expect = 4e-89, Method: Composition-based stats. Identities = 98/324 (30%), Positives = 159/324 (49%), Gaps = 6/324 (1%) Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q L + T+ + Q L I E + + +S+ + + + NDP+ + Sbjct: 16 WQKELAN-TVKNPQQLLQLLDISPENVPLSLKARKSFSMLVPMPFVKKMKKGDINDPLLQ 74 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q +P ++E + DP+ ++N S L G++H+Y R+LL L C + CR+CFRR Sbjct: 75 QVLPIEDEELVSEGYSTDPLEEHN-SALPGLLHKYQSRVLLILKSGCAINCRYCFRRHFP 133 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + ++ K + + YI+ ++ EVI +GGDPL+ LQ V+ L + ++ L Sbjct: 134 Y--QDNNINKKQLQEIITYIKSHPEVNEVILSGGDPLMSKDDFLQHVINELELLPQLRRL 191 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 R HSR+P+V P RI +L ++ V +H NH E + A+++L AG+ LL Sbjct: 192 RLHSRLPVVIPSRITDQLCHMFNKSRLNVVFVLHINHANEIDQIFKDAMNKLHQAGVQLL 251 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +QSVLLKGIND+ + L +L E I PYYL D G HF L + ++ + Sbjct: 252 NQSVLLKGINDNSQALVDLSEALFEAHILPYYLFLLDKVQGAQHFDLPEQRAIQLTQEMS 311 Query: 299 EKISGLCQPFYILDLPGGYGKVKI 322 + G P ++ G K I Sbjct: 312 AALPGYLVPRLSREIAGEKNKTLI 335 >gi|148358501|ref|YP_001249708.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby] gi|296105850|ref|YP_003617550.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy] gi|148280274|gb|ABQ54362.1| hypothetical protein LPC_0367 [Legionella pneumophila str. Corby] gi|295647751|gb|ADG23598.1| lysine 2,3-aminomutase [Legionella pneumophila 2300/99 Alcoy] Length = 326 Score = 332 bits (853), Expect = 4e-89, Method: Composition-based stats. Identities = 107/323 (33%), Positives = 165/323 (51%), Gaps = 6/323 (1%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + TS DL + + + + + E + + A + NP DP+ Q Sbjct: 8 WQKILAQGFTSTADLLDFLELPRSEGNLFAE--KQFPSRIPLGFAERMQKGNPKDPLLLQ 65 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + +++EL + + DP+ ++N + +KG++H+Y R+LL L VC V CR+CFRR Sbjct: 66 VLAKEDELTVADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPY 124 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + + AYI I EVI +GGDPL+ ++ L+++L++L I HV LR Sbjct: 125 --QANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHVHTLR 182 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P+RI+ L+ L I +H NHP E E + A S L A LL+ Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDESVLRACSDLKKATCYLLN 242 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL G+NDD IL+ L + I PYYLH D G++HF + + Q I L+ Sbjct: 243 QSVLLAGVNDDAVILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLPRAQSIYHQLQS 302 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 + G P + PG K + Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325 >gi|118602356|ref|YP_903571.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567295|gb|ABL02100.1| L-lysine 2,3-aminomutase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 315 Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats. Identities = 99/299 (33%), Positives = 158/299 (52%), Gaps = 9/299 (3%) Query: 24 QIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNH 83 +I+ K+ + I + A LI+ N NDP+ RQ I K L+ P+ + + Sbjct: 25 KIEAFKD--QDFPIKIPLEFAQLIDKSNKNDPLLRQVISSKV-LSKSENFSLLPLEEEKY 81 Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 SP+ G++H+YP+R+LL VC ++C++CFR+ S+ + + + + YI + Sbjct: 82 SPVAGLIHKYPNRVLLITSQVCAIHCQYCFRQNFNYSEHDAISNWNEVQ---NYIVNDVK 138 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I EVI +GGD L LS +L ++ + I H++ LR H+R +V P RI +L L ++ Sbjct: 139 INEVILSGGDLLSLSDDKLSILIDNIANIAHIKTLRIHTRSIVVMPSRITDKLADTLNQS 198 Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 V I +H NH E S + I++L +G+ LL+QSVLLKG+ND +IL L + Sbjct: 199 RLNVVIVLHTNHAQELSVKFAQKITKL--SGVTLLNQSVLLKGVNDSIKILTELCLKLFD 256 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 L I PYYLH D G F + ++ ++ LK +SG P + D G + K + Sbjct: 257 LGILPYYLHMLDKVQGAQDFLVKDDDAIQLHQQLKNNLSGYLVPKLVRDN-GNHSKDWL 314 >gi|78357789|ref|YP_389238.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220194|gb|ABB39543.1| L-lysine 2,3-aminomutase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 384 Score = 332 bits (851), Expect = 6e-89, Method: Composition-based stats. Identities = 106/346 (30%), Positives = 168/346 (48%), Gaps = 18/346 (5%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 M +H T TS N+ + ++ ++ + +Y+ +LIN +P DPI R Sbjct: 1 MTRQHATYTSC---INSLPLDAQEARALRPVMEYYAFRANDYYLSLINWDDPADPIRRII 57 Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P +E DP + ++ + G+ H+Y D +L C CRFCFR+ + Sbjct: 58 VPHPDETKD--WGELDPSDEARYTAVPGMQHKYRDTAILLAGKACGGLCRFCFRKRIF-- 113 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 +G DT ALAYI+ +I V+ +GGDPL+L L+ +LK L ++H+Q +R Sbjct: 114 MEGGTPPVPDTGKALAYIRAHKEITNVLISGGDPLLLPLAELEHILKGLDTVEHLQFIRI 173 Query: 181 HSRVPIVDPQRI--NPELIQCLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGI 235 SR+P+ DP I N L++ L +P +Y+ H NHP E S A+ A+ L AGI Sbjct: 174 GSRMPVFDPGLIAGNTRLLELLSRYSRPGRKLYMQTHFNHPRELSPLALEAVDALQRAGI 233 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 I+ +Q+ LL+G+ND PE L+ L + PYYL G HF + IEEG I+ Sbjct: 234 IMTNQTPLLRGVNDCPETLSELFAKLAGAGVPPYYLFVCRPTKGNRHFTVPIEEGYDILQ 293 Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 ++ +SG + + GK+++ V + H Sbjct: 294 KAQKTLSGPAKRVR-YAMSHATGKIEV-----VSVTHDQVVFRRHR 333 >gi|307609109|emb|CBW98551.1| hypothetical protein LPW_03791 [Legionella pneumophila 130b] Length = 326 Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats. Identities = 108/323 (33%), Positives = 164/323 (50%), Gaps = 6/323 (1%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + TS DL + + + + + E + + A + NP DP+ Q Sbjct: 8 WQKILAQGFTSTTDLLDFLELPRSEGNLFAE--KQFPSRIPLGFAKRMQKGNPKDPLLLQ 65 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + +++EL + DP+ ++N + +KG++H+Y R+LL L VC V CR+CFRR Sbjct: 66 VLAKEDELTEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPY 124 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + + AYI I EVI +GGDPL+ ++ L+++L++L I H+ LR Sbjct: 125 --QANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLR 182 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P+RI+ L+ L I IH NHP E E + A S L A LL+ Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDESVLQACSDLKKAACYLLN 242 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL GINDD IL+ L + I PYYLH D G++HF + + Q I L+ Sbjct: 243 QSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLPRAQSIYHQLQS 302 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 + G P + PG K + Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325 >gi|311695938|gb|ADP98811.1| lysine 2,3-aminomutase-like protein [marine bacterium HP15] Length = 454 Score = 330 bits (848), Expect = 2e-88, Method: Composition-based stats. Identities = 96/370 (25%), Positives = 158/370 (42%), Gaps = 48/370 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + + T + + +E + E+K +++ + + N LIN PNDPI + Sbjct: 20 RFKVYTDRQLDKIEVIQNLPEETLFEMKVVASVLPFRVNEYVINELINWDKVPNDPIYQL 79 Query: 60 FIPQK--------------------------------EELNILP-EEREDPIGDNNHSPL 86 PQK +ELN P + E + + + L Sbjct: 80 VFPQKGMLKEEHYERMATMHREGADKKEIQAVAKEIRDELNPHPAGQMEMNMPELDGEVL 139 Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + +L C YC FCFR K ++S + E Y+QE +++ Sbjct: 140 DGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLKMASTEAEKLHGYLQEHTEV 199 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------- 195 +++ TGGDP+++ K L + L+ L H+Q +R ++ P R + Sbjct: 200 TDLLVTGGDPMVMKTKNLVQYLEPLLEPEFDHIQTIRIGTKALTFWPYRFVTDKDADELI 259 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L L +AGK V I H NH E + E A AI R+ G + +Q L+K +NDD + Sbjct: 260 DLFARLVDAGKHVAIMAHYNHWQEITTEIAEEAIRRIRATGAEIRAQGPLIKHVNDDADA 319 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A L + V+L I PYY+ ++F + + E I +K+SGL + + Sbjct: 320 WAKLWKKEVQLGIIPYYMFVERDTGAKNYFEVPLAEAFHIYREAMKKVSGLARTARGPSM 379 Query: 314 PGGYGKVKID 323 G GKV+I Sbjct: 380 SAGPGKVEIQ 389 >gi|54293293|ref|YP_125708.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens] gi|53753125|emb|CAH14572.1| hypothetical protein lpl0341 [Legionella pneumophila str. Lens] Length = 326 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 107/323 (33%), Positives = 164/323 (50%), Gaps = 6/323 (1%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + TS DL + + + + + E + + A + NP DP+ Q Sbjct: 8 WQKILAQGFTSTTDLLDFLELPRSEGNLFAE--KQFPSRIPLGFAKRMQKGNPKDPLLLQ 65 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + +++EL + DP+ + N++ +KG++H+Y R+LL L VC V CR+CFRR Sbjct: 66 VLAKEDELTEADDYVIDPLSE-NNTLIKGLLHKYRGRVLLTLTGVCAVNCRYCFRRHFPY 124 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + + AYI I EVI +GGDPL+ ++ L+++L++L I H+ LR Sbjct: 125 --QANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLR 182 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P+RI+ L+ L I IH NHP E E + A S L A LL+ Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVIHCNHPQELDESVLRACSDLKKAACYLLN 242 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL GINDD IL+ L + I PYYLH D G++HF + + + I L+ Sbjct: 243 QSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLPRARSIYHQLQS 302 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 + G P + PG K + Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325 >gi|54296337|ref|YP_122706.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris] gi|53750122|emb|CAH11514.1| hypothetical protein lpp0366 [Legionella pneumophila str. Paris] Length = 326 Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats. Identities = 108/323 (33%), Positives = 165/323 (51%), Gaps = 6/323 (1%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + TS DL + + + + + E + + A + NP DP+ Q Sbjct: 8 WQKILAQGFTSTTDLLDFLELPRSEGNLFAE--KQFPSRIPLGFAKRMQKGNPKDPLLLQ 65 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + +++EL + DP+ ++N + +KG++H+Y R+LL L VC V CR+CFRR Sbjct: 66 VLAKEDELTEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPY 124 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + + AYI I EVI +GGDPL+ ++ L+++L++L I H+ LR Sbjct: 125 --QANNPGRRGWKEVCAYIANDPSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLR 182 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P+RI+ L+ L I +H NHP E E + A S L A LL+ Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDESVLRACSDLKKAACYLLN 242 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL GINDD IL+ L T + I PYYLH D G++HF + + Q I L+ Sbjct: 243 QSVLLAGINDDAGILSKLSHTLFDYGIMPYYLHLLDKVKGSAHFDMPLPRAQSIYHQLQS 302 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 + G P + PG K + Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325 >gi|220934891|ref|YP_002513790.1| radical SAM domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] gi|219996201|gb|ACL72803.1| radical SAM domain-containing protein [Thioalkalivibrio sp. HL-EbGR7] Length = 455 Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats. Identities = 95/364 (26%), Positives = 153/364 (42%), Gaps = 49/364 (13%) Query: 9 TSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEE 66 S + + + + Q E+K +++ + + N LI+ N P DPI + PQK Sbjct: 27 RSLEKIPQLAKLSEAQRFEMKVVASVLPFRVNEYVINELIDWSNIPADPIFQLTFPQKGM 86 Query: 67 LNILPEEREDPIG----DNNH-----------------------------SPLKGIVHRY 93 L ER + D H ++G+ H+Y Sbjct: 87 LAPESYERMAELHRRGADKAHISALAKELRDGLNPHPAGQLEMNLPRVNGEVVEGLQHKY 146 Query: 94 PDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 + +L C YC FCFR K ++S + L Y++E Q+ +++ TG Sbjct: 147 RETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLRIASNQKDQVLGYLREHPQVTDLLVTG 206 Query: 152 GDPLILSHKRLQKVLKTLR---YIKHVQILRFHSRVPIVDPQRINPE--------LIQCL 200 GDP+++ K L + L+ L + HVQ +R ++ P R + L+ L Sbjct: 207 GDPMVMKTKNLAQYLEPLMEDDSLAHVQTVRIGTKALTFWPYRFVTDNDADELLDLLTRL 266 Query: 201 KEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 ++G+ V I H NH E + A AI RL G+ + SQ LL INDDP + A L + Sbjct: 267 VKSGRQVAIMAHYNHWRELETPIAREAIRRLRETGVEIRSQGPLLAHINDDPAVWARLWK 326 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 T V+L I PYY+ +F + + I +++SGL + + G GK Sbjct: 327 TQVQLGIIPYYMFVERDTGARHYFEVPLARAANIYREAMKQVSGLGRTARGPSMSAGPGK 386 Query: 320 VKID 323 V+I Sbjct: 387 VEIQ 390 >gi|52840543|ref|YP_094342.1| L-lysine 2,3-aminomutase [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] gi|52627654|gb|AAU26395.1| L-lysine 2,3-aminomutase, radical SAM domain protein [Legionella pneumophila subsp. pneumophila str. Philadelphia 1] Length = 326 Score = 329 bits (844), Expect = 5e-88, Method: Composition-based stats. Identities = 108/323 (33%), Positives = 166/323 (51%), Gaps = 6/323 (1%) Query: 1 MQ-LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + TS DL + + + + + E + + A + NP DP+ Q Sbjct: 8 WQKILAQGFTSTTDLLDFLELPRSEGNLFAE--KQFPSRIPLGFAKRMQKGNPKDPLLLQ 65 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + +++EL+ + DP+ ++N + +KG++H+Y R+LL L VC V CR+CFRR Sbjct: 66 VLAKEDELSEADDYVIDPLSESN-TLIKGLLHKYHGRVLLTLTGVCAVNCRYCFRRHFPY 124 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + + AYI S I EVI +GGDPL+ ++ L+++L++L I H+ LR Sbjct: 125 --QANNPGRRGWKEVCAYIANDSSITEVILSGGDPLLAANLVLEELLQSLEEISHIHTLR 182 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P+RI+ L+ L I +H NHP E E + A S L A LL+ Sbjct: 183 IHTRIPIVLPERIDKGLLDLLTNTRFKKVIVVHCNHPQELDESVLRACSDLKKAACYLLN 242 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLL GINDD IL+ L + I PYYLH D G++HF + + Q I L+ Sbjct: 243 QSVLLAGINDDAGILSKLSHALFDYGIMPYYLHLLDKVKGSAHFDMPLLRAQSIYHQLQS 302 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 + G P + PG K + Sbjct: 303 LVPGYLLPRLAREEPGRSSKTLL 325 >gi|270157927|ref|ZP_06186584.1| KamA family protein [Legionella longbeachae D-4968] gi|289163802|ref|YP_003453940.1| lysine aminomutase [Legionella longbeachae NSW150] gi|269989952|gb|EEZ96206.1| KamA family protein [Legionella longbeachae D-4968] gi|288856975|emb|CBJ10789.1| putative lysine aminomutase [Legionella longbeachae NSW150] Length = 327 Score = 328 bits (843), Expect = 5e-88, Method: Composition-based stats. Identities = 95/323 (29%), Positives = 156/323 (48%), Gaps = 5/323 (1%) Query: 1 MQLR-HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + TS +L + + + + + A + NP+DP+ Q Sbjct: 8 WQKKLAQGFTSVTELLTYLELPLSTGN--LDAEKQFPSRIPLGFAKRMQKGNPHDPLLLQ 65 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 + EL E DP+ +++++ ++G++H+Y R+LL + VC V CR+CFRR Sbjct: 66 VLASGYELQGSEEYSSDPLDEHSNNSVRGLLHKYHGRVLLTMTGVCAVNCRYCFRRHFPY 125 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + YI + + I EVI +GGDPL+ S L ++++ L I H+ LR Sbjct: 126 --QANNPGRAGLKHICDYIAQDTSITEVILSGGDPLLASDVVLGELIEQLEQIPHLHTLR 183 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+P+V P+RI+ L+ LK+ I +H NH E + + L LL+ Sbjct: 184 IHTRIPVVFPERIDLNLLSLLKKVKLNKVIVLHCNHAQELDDSVRPVLHELRRIDCHLLN 243 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q+VLL GIND+ +LA+L +T + PYYLH D G +HF L + I L+ Sbjct: 244 QTVLLAGINDNAHVLADLSQTLFSFGVLPYYLHVLDKVKGAAHFDLPFNTVKGIYQQLQN 303 Query: 300 KISGLCQPFYILDLPGGYGKVKI 322 + G P + + PG K + Sbjct: 304 LLPGYMLPRLVREEPGKSSKTLL 326 >gi|282890405|ref|ZP_06298933.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499787|gb|EFB42078.1| hypothetical protein pah_c016o147 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 326 Score = 328 bits (842), Expect = 7e-88, Method: Composition-based stats. Identities = 97/318 (30%), Positives = 154/318 (48%), Gaps = 6/318 (1%) Query: 5 HKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 + T + L + + EI + + + L +A I + +DPI +QF+P Sbjct: 14 RQNFTQWKKLADFLELDPSIQQEIFK-RPSFPLNLPKRLAEKIKKNTLDDPILKQFLPTL 72 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E L DP+GD + ++H+Y R L+ C + CRFCFR+ + Sbjct: 73 AEQKQLAGFTLDPVGDTQFTKAPKLLHKYNGRALIVCTSACVMNCRFCFRQNFDYEVQEK 132 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 + L I + E+I +GGDPL LS L +L L +IKHV+ +RFH+R Sbjct: 133 GFQKE-----LELIAADETLQEIILSGGDPLSLSDTVLVHLLDALSHIKHVKRVRFHTRF 187 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 PI P+RI+ + + + +H NHP E + + L G+ILL+QSVLL Sbjct: 188 PIGIPERIDDAFLNLFENRPFITWFVLHTNHPNELDDHIFHHLHLLQRKGVILLTQSVLL 247 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 KG+ND P++L L V I PYYLH D G +HF ++ E G++++ + + + G Sbjct: 248 KGVNDCPKVLCELFNQLVNRGIIPYYLHQLDRVQGGAHFEVSEERGKELIQEIAKSLPGY 307 Query: 305 CQPFYILDLPGGYGKVKI 322 P Y+ ++ G K + Sbjct: 308 AVPKYVREIAGEPNKTPL 325 >gi|317121265|ref|YP_004101268.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885] gi|315591245|gb|ADU50541.1| L-lysine 2,3-aminomutase [Thermaerobacter marianensis DSM 12885] Length = 361 Score = 327 bits (839), Expect = 1e-87, Method: Composition-based stats. Identities = 101/336 (30%), Positives = 171/336 (50%), Gaps = 10/336 (2%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72 D+ + E+ ++ ++ Y + +LI+ +P+DPI R IP + EL Sbjct: 7 DIREIEQLAAEERQRLRPVTETYVFRVNDYYLSLIDWDDPDDPIRRIVIPSEVEL--AEY 64 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 DP + ++ G H+Y LL + VC YCRFCFR+ + S D E Sbjct: 65 GSLDPSDEESNYVAPGCQHKYGPTALLLVSKVCGAYCRFCFRKRLFREDVEEHHVSMDVE 124 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 L YI +I V+ TGGDPL+LS +RL ++L LR I HV+++R +++P +P R+ Sbjct: 125 PGLRYIAAHPEITNVLLTGGDPLMLSPRRLDQILTRLRAIPHVKVIRIGTKIPAFEPMRV 184 Query: 193 NP--ELIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 EL++ L+ + ++ ++H NHP E +EEA+ I L G+ L++Q+ LL+ + Sbjct: 185 TDNPELLEVLRRHSRADARIHFSLHFNHPREMTEEALRCIIALQEVGVTLVNQTPLLRRV 244 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP 307 NDDP +LA L+ I PYY+ AG + F + + EG +IV K ++SG + Sbjct: 245 NDDPAVLAELLERLTWWGIAPYYIFQNRPVAGNADFVVPLREGYRIVEQAKARVSGYAKR 304 Query: 308 -FYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342 Y+ + GK++I +++ + + + Sbjct: 305 VRYV--MSHATGKIEILAVEGERIYLKYHQARNPED 338 >gi|327398266|ref|YP_004339135.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411] gi|327180895|gb|AEA33076.1| Lysine 2,3-aminomutase [Hippea maritima DSM 10411] Length = 304 Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats. Identities = 112/292 (38%), Positives = 170/292 (58%), Gaps = 8/292 (2%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 I QF K EL + +DP+G+ HS KG++HRY DR++L + + C YCRFCFR+ Sbjct: 18 IKSQFCFSKGELFLNG--NKDPLGEKKHSKAKGLIHRYTDRVVLTVTNKCFAYCRFCFRK 75 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 S +G L E ++ Y+++ + EV+ +GGDP LS+K+L ++L +R IKH+ Sbjct: 76 NNWQSFEGFSL-----EESVNYLKKTKNVREVLISGGDPFFLSNKKLAEILTAIRSIKHI 130 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235 +R SRV P RI+ + + LK KP++IA H NHP E ++E + L ++GI Sbjct: 131 STIRIGSRVLSSLPIRIDNQTAEMLK-LFKPIWIAAHINHPDEITDEFKKSARLLLDSGI 189 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 ++SQ+VLLK IND+ L L + V++ IKPYYL D A G FR++I++ ++ Sbjct: 190 PIVSQTVLLKNINDNETTLKKLFCSLVDIGIKPYYLFGCDQAVGNGIFRVSIDKALSLME 249 Query: 296 SLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 L+ KISGLC P + DLP GYGKV ++ + I K + + +Y Sbjct: 250 KLRGKISGLCMPTFSFDLPSGYGKVTLEPNRIIKRNGNIFTFKNFEGKEINY 301 >gi|120556236|ref|YP_960587.1| radical SAM domain-containing protein [Marinobacter aquaeolei VT8] gi|120326085|gb|ABM20400.1| L-lysine 2,3-aminomutase [Marinobacter aquaeolei VT8] Length = 454 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 94/370 (25%), Positives = 155/370 (41%), Gaps = 48/370 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + + T + + +E + E+K +++ + + N LIN PNDPI + Sbjct: 20 RFKVFTDRQLDKIEAIQNLPEETLFEMKVVASVLPFRVNEYVINELINWDKVPNDPIYQL 79 Query: 60 FIPQKEEL--------------------------------NILP-EEREDPIGDNNHSPL 86 PQK L N P + E + + + L Sbjct: 80 VFPQKGMLKDEHYERMAQLHREGADKKDIQAAAKEIRDALNPHPAGQMEMNMPELDGEVL 139 Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + +L C YC FCFR K ++S D E Y+QE +++ Sbjct: 140 DGVQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKDLKMASTDAEKLHGYLQEHTEV 199 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINP-------- 194 +++ TGGDP+++ K L + L+ L H+Q +R ++ P R Sbjct: 200 TDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTKALTFWPYRFVTDKDADELI 259 Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253 EL L + GK V I H NH E + + A AI R+ G + +Q L+K +NDD + Sbjct: 260 ELFARLVDGGKHVAIMAHYNHWQEITTDIAEEAIRRIRATGAEIRAQGPLIKHVNDDADA 319 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A L + V+L I PYY+ ++F + + E I +++SGL + + Sbjct: 320 WAKLWKKEVKLGIIPYYMFVERDTGAKNYFEVPLAEAYHIYREAMKQVSGLARTARGPSM 379 Query: 314 PGGYGKVKID 323 G GKV+I Sbjct: 380 SAGPGKVEIQ 389 >gi|83771333|dbj|BAE61465.1| unnamed protein product [Aspergillus oryzae] Length = 464 Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats. Identities = 113/387 (29%), Positives = 179/387 (46%), Gaps = 41/387 (10%) Query: 1 MQLRHKTLTSAQDLYNAN----------------LIKKEQIDEIKEISNHYSIAL--TPV 42 Q+++ +L S + L N + + E I ++ +A+ TP Sbjct: 65 WQMKN-SLQSPKALLNFLAAVLPSEIRSSSTQGYVTRAEFIADVATGMKKAPMAVRLTPH 123 Query: 43 IANLINP-HNPNDPIARQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRI-LL 99 I +LIN +DPI RQFIP P+ + D + + + SP+KG+VHRYPD+ Sbjct: 124 ILSLINWKEAYSDPIRRQFIPIASSFKPDHPQLQLDSLHETHDSPVKGLVHRYPDKNDSY 183 Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSS------KDTEAALAYIQEKSQIWEVIFTGGD 153 VCPVYCRFC R VG Q TV K E YI ++ +V+ +GGD Sbjct: 184 LATSVCPVYCRFCTRSYSVGQQTETVSKKRFLPLQKYWEPMFEYIARTPEVTDVVVSGGD 243 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI---NPELIQCL-------KEA 203 L +L+++ TL I H++ +RF S+ V P RI + E + L +E Sbjct: 244 TFFLEPSQLREIGTTLLGIDHIRRIRFASKGLSVCPSRILDPSDEWTRVLIEISNRGREK 303 Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 GK + + H NHP E S A +L + + + +Q+VLL +N++ + L+R + Sbjct: 304 GKNIALHTHFNHPQEISWITEQAAQKLFHNAVTVRNQTVLLNKVNNNVPTMKRLIRKLAD 363 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 I+PYY++ D+ G R + + I + ++ I+G P +++DLPGG GK Sbjct: 364 NNIQPYYVYQGDMVQGVEDLRTPLRDILHIESHIRGTIAGFMTPSFVVDLPGGGGKRLAS 423 Query: 324 TH--NIKKVGNGSYCITDHHNI-VHDY 347 T + G + VH Y Sbjct: 424 TFESYDTRTGVSRFLAPGVKGNTVHQY 450 >gi|196234182|ref|ZP_03133014.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus Ellin428] gi|196221741|gb|EDY16279.1| lysine 2,3-aminomutase YodO family protein [Chthoniobacter flavus Ellin428] Length = 456 Score = 326 bits (837), Expect = 3e-87, Method: Composition-based stats. Identities = 100/370 (27%), Positives = 169/370 (45%), Gaps = 25/370 (6%) Query: 2 QLRHKTLTSAQDLYN-ANLIKKEQI-DEIKEISNHYSI--ALTPVIANLINPHNP-NDPI 56 Q RH T+T+ + L + E ++++ +H + ++P + LI+ +P +DPI Sbjct: 56 QNRH-TVTNPRQLKETLGALAPEGFYEDLQAALDHAPMALRISPYLLGLIDWRDPLHDPI 114 Query: 57 ARQFIPQKEELNI-LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 QF+P + + P + D + + SP+ G+ HRYPD+ L CPVYCRFC R Sbjct: 115 RTQFLPLRSQQQPDHPLLQLDSLHEQEDSPVPGLTHRYPDKALFLPQLSCPVYCRFCTRS 174 Query: 116 EMVGSQKGTV------LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 VG+ V S E A AYI + + +++ +GGD L LQ + + L Sbjct: 175 YAVGNDTPEVEKLALTTSLARWEQAFAYIASQPDLEDIVISGGDSYNLKADHLQLIGERL 234 Query: 170 RYIKHVQILRFHSRVPIVDPQRI------NPELIQCL---KEAGKPVYIAIHANHPYEFS 220 + +++ +R+ ++ V PQ+I L + + K V + H NHP E + Sbjct: 235 LKMPNIRRIRYATKGLCVMPQKILSDHAWTDALTRVAELGRSLHKDVVVHTHFNHPAEIT 294 Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280 A++ L GI + Q+VL + +NDDP + L+R + + PYY++ D+ G Sbjct: 295 SITQDAMNVLVERGIHVRCQTVLQRTVNDDPATMTQLVRRLSYVNVHPYYVYMHDMVPGV 354 Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340 R + QK+ ++ +G P ++LD PGG GK + + G T Sbjct: 355 EDLRTPLATAQKLEKYVRGATAGFNTPAFVLDAPGGGGKRDVHSPERYDRATGISVFTSP 414 Query: 341 H---NIVHDY 347 Y Sbjct: 415 SVKPGKQFLY 424 >gi|91772254|ref|YP_564946.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242] gi|91711269|gb|ABE51196.1| L-lysine 2,3-aminomutase [Methanococcoides burtonii DSM 6242] Length = 441 Score = 326 bits (837), Expect = 3e-87, Method: Composition-based stats. Identities = 87/368 (23%), Positives = 155/368 (42%), Gaps = 48/368 (13%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60 R TL++ +++ +EQ ++I + + + + + LIN N PNDP+ R Sbjct: 14 FRAYTLSNYKEIPQIQNFTQEQQEDIGIAARIFPFRVNNYVIDELINWDNVPNDPMFRLT 73 Query: 61 IPQKEEL--------------------------------NILPEERED-PIGDNNHSPLK 87 P K+ L N P + D + + N L+ Sbjct: 74 FPNKDMLLPPHYKEMKHLLHTAASEEEVQQAIHKIRLTLNPHPAGQLDKNVPELNGKVLE 133 Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 G+ H+Y + +L C +C FCFR K +S++ E ++Y+QE ++ Sbjct: 134 GMQHKYNETVLFFPTQGQTCHTFCTFCFRWAQFTGMKDLKFASREIETLVSYLQEHPEVK 193 Query: 146 EVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE-------- 195 +V+FTGGDP+ +S L++ ++ + I+ ++ +R ++ PQR + Sbjct: 194 DVLFTGGDPMTMSANLLKRYIEPILEADIRTIENIRIGTKSLSYWPQRFVSDKDSEDILS 253 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 L + + K + I H NHP E + + AI + G + +QS L+ INDDP I Sbjct: 254 LFSNVTDHNKHMAIMGHFNHPVELTTDTVKEAIKNIRATGAQIRTQSPLIAHINDDPVIW 313 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 + R V L PYY+ +F I + +I + +SGL + + Sbjct: 314 EQMWREQVRLGCIPYYMFMVRNTGANHYFDTPISKAWEIFQEAYQNVSGLARTVRGPSMS 373 Query: 315 GGYGKVKI 322 GK+ + Sbjct: 374 TDPGKINV 381 >gi|193214957|ref|YP_001996156.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium ATCC 35110] gi|193088434|gb|ACF13709.1| lysine 2,3-aminomutase related protein [Chloroherpeton thalassium ATCC 35110] Length = 465 Score = 326 bits (837), Expect = 3e-87, Method: Composition-based stats. Identities = 89/366 (24%), Positives = 157/366 (42%), Gaps = 48/366 (13%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQ 63 TL + +++ + ++ + I + + + + + LI+ N PNDPI PQ Sbjct: 27 YTLKNFRNIQQLKHLPEDVVSAIAVVGHVFPFKVNSYVTEKLIDWGNAPNDPIFTLTFPQ 86 Query: 64 K--------------------------------EELNILP-EEREDPIGDNNHSPLKGIV 90 K EELN P + E + N + G+ Sbjct: 87 KGMLLPHHYEIVQALLAENAPKSKLAKAINQIREELNPHPAGQLEFNVPKLNGQKIDGLQ 146 Query: 91 HRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 H+Y + L C YC +CFR G +++ E +AY++ ++I +V+ Sbjct: 147 HKYNETALFFPSEGQSCHAYCTYCFRWPQFGENDDLKIATNQIENVIAYLKHHTEISDVL 206 Query: 149 FTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE--------LIQ 198 TGGDPL +S K L K + L + H++ +R ++ P R E + Sbjct: 207 ITGGDPLTMSAKSLSKYVLALLSEDLPHIRTIRIGTKTLTYWPYRFLTEKDSEQLLDAFR 266 Query: 199 CLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 + +GK + + H NHP E + E AI R+ G ++ +QS +++GINDD +I + L Sbjct: 267 MIVRSGKHLALMTHFNHPVELETPEVAEAIQRIRETGAVIRTQSPIIRGINDDAKIWSAL 326 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 + V L + PYY+ P FR+++ +I + +SG+C+ + Sbjct: 327 WKRQVSLGLVPYYMFIPRDTGAQHFFRISLVRAWEIFKEAYQHVSGICRTVRGPSMSTNP 386 Query: 318 GKVKID 323 GKV++ Sbjct: 387 GKVQVM 392 >gi|257457951|ref|ZP_05623110.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580] gi|257444664|gb|EEV19748.1| L-lysine 2,3-aminomutase [Treponema vincentii ATCC 35580] Length = 345 Score = 326 bits (836), Expect = 4e-87, Method: Composition-based stats. Identities = 98/322 (30%), Positives = 165/322 (51%), Gaps = 9/322 (2%) Query: 34 HYSIALTPVIANLINPHNP--NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH 91 ++P LI P + + RQ + E + EER DP+G+ + +VH Sbjct: 25 RLPEHVSPAFQALITSAEPAASAALRRQVLSSDSEQLVSEEERGDPLGEARYCVTPYLVH 84 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 +YP+R+LL C YCR+CFRRE G LS +Y++ ++ E++ +G Sbjct: 85 QYPNRVLLLSTGRCISYCRYCFRREFTARSSG-FLSEAQIGTVTSYLKTHPEVQEILVSG 143 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 GDP+ ++ +L+ LR + ++R +R P+ P+ I L + +P+++ Sbjct: 144 GDPMSGGFGEIKHLLECLRSVCSDLLIRLCTRAPVFAPELFTEAFI-MLLRSVRPLWVIA 202 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYL 271 H NHP E + A++R ++GI + +Q+VLL+G+ND+P +LA L V + +KP YL Sbjct: 203 HINHPAELGKAQRQALTRCIDSGIPVQTQTVLLRGVNDEPAVLAELFHALVCMGVKPGYL 262 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT-----HN 326 DLA GT+HFR+ +E+ I L+ ++SGL P + +DLP G GK + Sbjct: 263 FQTDLARGTAHFRVPLEKAASIWKELRTRLSGLSLPQFAVDLPNGGGKFPLSALLRYEDI 322 Query: 327 IKKVGNGSYCITDHHNIVHDYP 348 I + +G + ++ YP Sbjct: 323 ISPLQDGRFSARGIDGKIYTYP 344 >gi|114320341|ref|YP_742024.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1] gi|114226735|gb|ABI56534.1| L-lysine 2,3-aminomutase [Alkalilimnicola ehrlichii MLHE-1] Length = 456 Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats. Identities = 88/390 (22%), Positives = 165/390 (42%), Gaps = 49/390 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQ 59 + + T + + + + +++ ++ ++N + + N LI+ P+DPI + Sbjct: 20 RFQVFTARNMDKIPGLDRMPEDERFAMRVVANVLPFRVNEYVINELIDWEKAPDDPIYQL 79 Query: 60 FIPQK--------------------------------EELNILP-EEREDPIGDNNHSPL 86 IPQ+ ELN P + + + ++ L Sbjct: 80 TIPQRGMLAPALFDRMADVLRRDASREEINRVAWEIRNELNPHPAGQMKLNVPQHDGEKL 139 Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 +G+ H+Y + +L VC YC FCFR K +S + E AY+++ ++ Sbjct: 140 EGMQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFVGDKDLQFASNEAERLHAYLRDHREV 199 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195 +++ TGGDP+++ ++L++ L L ++HVQ +R ++ P R + Sbjct: 200 SDLLLTGGDPMVMKTRKLEEYLDPLLAADLEHVQTVRLGTKALTFWPYRFVTDKDADDLL 259 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L + L +G+ V + H NHP E + A AI R+ + G+ + +Q LL IND E Sbjct: 260 RLFERLVNSGRHVALMAHYNHPQELKTPIAEEAIRRIRDTGVEIRAQGPLLAHINDSSEA 319 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A L R V L I PYY+ +F + + +I +++SGL + + Sbjct: 320 WAELWRKQVRLGIIPYYMFVERDTGARHYFEVPLARAWEIYRDAMKQVSGLGRTARGPSM 379 Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 G GKV++ + G + + Sbjct: 380 SAGPGKVEVQG-ITEVQGEKVFVLRFIQGR 408 >gi|149375732|ref|ZP_01893500.1| Radical SAM domain protein [Marinobacter algicola DG893] gi|149359857|gb|EDM48313.1| Radical SAM domain protein [Marinobacter algicola DG893] Length = 454 Score = 324 bits (831), Expect = 1e-86, Method: Composition-based stats. Identities = 92/370 (24%), Positives = 158/370 (42%), Gaps = 48/370 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + + T + + +E + E+K +++ + + N LI+ + PNDP+ + Sbjct: 20 RFKVYTDRQLDKIDVIQNLPEETLFEMKVVASVLPFRVNEYVINELIDWNKVPNDPLYQL 79 Query: 60 FIPQK--------------------------------EELNILP-EEREDPIGDNNHSPL 86 PQK +ELN P + E + + N L Sbjct: 80 VFPQKGMLKDEHYERMAKMHREGAEKKEIQAVAKEIRDELNPHPAGQMEMNMPELNGEVL 139 Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + +L C YC FCFR K ++S + E Y+QE +++ Sbjct: 140 DGVQHKYRETVLFFPAQGQTCHSYCTFCFRWAQFVGDKDLKMASTEAEKLHGYLQEHTEV 199 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195 +++ TGGDP+++ K L + L+ L H+Q +R ++ P R + Sbjct: 200 SDLLVTGGDPMVMKTKNLVQYLEPLLQPEFDHIQTIRIGTKALTFWPYRFVTDKDADELI 259 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L L +AGK V I H NH E + + A AI RL G + +Q L+K +ND+ + Sbjct: 260 DLFARLVDAGKHVAIMAHYNHWQEITTDIAEEAIRRLRATGAEIRAQGPLIKHVNDNADD 319 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A L V+L I PYY+ ++F + + E I +++SGL + + Sbjct: 320 WAKLWDKEVQLGIIPYYMFVERDTGAKNYFEVPLVEAFNIYREAIKQVSGLARTARGPSM 379 Query: 314 PGGYGKVKID 323 G GKV++ Sbjct: 380 SAGPGKVEVQ 389 >gi|297563081|ref|YP_003682055.1| hypothetical protein Ndas_4154 [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296847529|gb|ADH69549.1| conserved hypothetical protein [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 454 Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats. Identities = 79/369 (21%), Positives = 150/369 (40%), Gaps = 47/369 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + R T +L + ++ ++ ++ + + + LI+ P+DPI R Sbjct: 16 RFRAYTTKHLDELTTRAGLAADERLAVQAVATVLPFRVNSYVVDELIDWDAAPDDPIYRL 75 Query: 60 FIPQKEEL--------------------------------NILPEERED-PIGD-NNHSP 85 PQ + L N P + D + N P Sbjct: 76 VFPQADMLPQDDVSRIADLLRSGAQRKELNEAANQIRARLNPHPAGQMDLNVPKLANEEP 135 Query: 86 LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + G+ H+Y + +L C YC +CFR +S + + + Y++ + Sbjct: 136 IPGVQHKYKETVLFFPKQGQTCHAYCTYCFRWAQFVGDADLKFASSEIDQLVDYVRSHPE 195 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPE 195 + V+FTGGDP+I+ + K ++ L I+H++ +R ++ PQR Sbjct: 196 VTSVLFTGGDPMIMGEGVISKYIEPLLEIEHLEAIRIGTKALAYWPQRFVTDPDADDTLR 255 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 L + + +GK + H +HP E E A A+ R+ G ++ +Q+ L++ INDD + Sbjct: 256 LFEKVVASGKNLAFMAHFSHPNEMRPELAQEAVRRIRATGAVIRTQAPLIRTINDDSAVW 315 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 ++ RT + + PYY+ +F + + E +I + +SGL + + Sbjct: 316 ESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYEIFRGAYKSVSGLARTVRGPSMS 375 Query: 315 GGYGKVKID 323 GKV +D Sbjct: 376 ATPGKVCVD 384 >gi|292491849|ref|YP_003527288.1| L-lysine 2,3-aminomutase [Nitrosococcus halophilus Nc4] gi|291580444|gb|ADE14901.1| L-lysine 2,3-aminomutase, putative [Nitrosococcus halophilus Nc4] Length = 446 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 97/390 (24%), Positives = 162/390 (41%), Gaps = 49/390 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + + T + + E+ E++ ++ + + N LI+ N P+DPI + Sbjct: 22 RFKVFTARQLDQIPQLQKLSAERRFEMEVVARVLPFRVNEYVINELIDWGNVPDDPIFQL 81 Query: 60 FIPQKE--------------------------------ELNILP-EEREDPIGDNNHSPL 86 IPQ++ ELN P + ED I N + Sbjct: 82 TIPQRDMLAPEHFNRVASAIIRGADRKTLDAVIREVRAELNPHPAGQMEDNIPTLNGERV 141 Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 +G+ H+Y + +L VC YC FCFR K +++K+T AY++ ++ Sbjct: 142 EGLQHKYRETVLFFPSSGQVCHSYCTFCFRWAQFVGDKELKIAAKETHQLQAYLRAHPEV 201 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP-------- 194 +V+ TGGDPL++ + L+ L+ L HV+ +R ++ PQR Sbjct: 202 TDVLVTGGDPLVMKTRNLRAYLEPLLGEAFSHVKTIRIGTKSLTFWPQRFVTDDDADDLL 261 Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L + ++ AGK + + H NH E A AI R+ G + SQ LL INDD I Sbjct: 262 ALFEEIQGAGKHLALMAHYNHWQELEPAIAREAIRRVRATGAQIRSQGPLLAHINDDANI 321 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A L RT V L I PYY+ ++F + + + +I +K+SG+ + + Sbjct: 322 WARLWRTQVGLGIIPYYMFVERDTGARNYFEVPLIKAWQIYRDAIQKVSGIGRTARGPSM 381 Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 GKV+I + G + + Sbjct: 382 SAHPGKVEIQGV-TEIQGEKAIVLRMIQGR 410 >gi|193211898|ref|YP_001997851.1| radical SAM domain-containing protein [Chlorobaculum parvum NCIB 8327] gi|193085375|gb|ACF10651.1| Radical SAM domain protein [Chlorobaculum parvum NCIB 8327] Length = 433 Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats. Identities = 89/381 (23%), Positives = 169/381 (44%), Gaps = 48/381 (12%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQF 60 + T + Q L + I EQ+ IK ++ Y + +A NLI+ N P+DP+ R Sbjct: 4 FQSYTAENIQQLPQYDTIPPEQLHAIKVVAEVYPFRVNSHVAENLIDWSNIPDDPMFRLS 63 Query: 61 IPQKEEL--------------------------NILPEEREDPIGDN-------NHSPLK 87 PQ L I + +P G + PL Sbjct: 64 FPQAGMLSGEDFRTISDLVLSDADSQLIRQEARKIQLRQNPNPAGQMELNTPRLDGEPLH 123 Query: 88 GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 G+ H+Y + +L L VC YC +CFR + +++ + + Y++ ++ Sbjct: 124 GMQHKYRESVLFFPLEAQVCHAYCTYCFRWPQFSGLESLKFANESVDKLIDYLRSHPEVK 183 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----PELIQCL 200 +VIFTGGDP+++S + ++K ++ L + ++ +R ++ P R +LI+ Sbjct: 184 DVIFTGGDPMVMSTELIEKYMRPLLDVPTLRTIRIGTKSLSWWPGRFTTDSDADQLIRFF 243 Query: 201 KE---AGKPVYIAIHANHPYEFS-EEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 +E +GK + I H +HP E EA+ A+ R+ + G ++ SQS +++ +NDD E+ Sbjct: 244 EEVVTSGKHLAIMAHMSHPREIDNPEAVDAVRRIRSTGAVIRSQSPVVRHVNDDSEVWEE 303 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 + + V+L + PYY+ +F + + E I ++SGL + + Sbjct: 304 MWQKQVQLGVIPYYMFLERDTGPKHYFEVPLAEALDIYNGAYRQMSGLGRTVRGPSMSCS 363 Query: 317 YGKVKIDTHNIKKVGNGSYCI 337 GKV + ++ ++ + + Sbjct: 364 PGKVIV--EDVTEINDEKLFV 382 >gi|298528426|ref|ZP_07015830.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira thiodismutans ASO3-1] gi|298512078|gb|EFI35980.1| lysine 2,3-aminomutase YodO family protein [Desulfonatronospira thiodismutans ASO3-1] Length = 521 Score = 322 bits (827), Expect = 4e-86, Method: Composition-based stats. Identities = 106/353 (30%), Positives = 175/353 (49%), Gaps = 11/353 (3%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 QLR + S + L + + ++E+ ++ Y + LTP A LI P + +DP+ Q + Sbjct: 158 QLR-YAIESPRTLESILNLPAGALEEVGRVTKDYRMRLTPYYAGLIMPESLDDPVLLQSV 216 Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P E ++ E P +HSP + I YP + +K ++C +YC C R +G + Sbjct: 217 PTGEMVDNAGVEM--PPVAADHSPARLIDQFYPRVVTIKATNMCAMYCTHCLRIAHIG-K 273 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 K + + AL YI+ +I +V+ TGGD +L K L+ +L L ++HV+I R Sbjct: 274 KDRIYPEQAYSEALDYIRRDRRIRDVLITGGDAFMLPDKVLRYMLSELDGMEHVRIKRLG 333 Query: 182 SRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +R+P+ PQR++ EL+ L+E+ KPV + N E + + A R++ A +L+ Sbjct: 334 TRIPVTTPQRVDQELLDILEESNDKKPVRVVTQINTAQEITPVSREAFRRISKAVSAVLN 393 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT-SHFRLTIEEGQKIVASLK 298 Q+VLLKGIND +A+L T E ++PYY+ + SH R+ +E+G+ IV + Sbjct: 394 QAVLLKGINDSFVKMAHLCETIQEAYVRPYYIFNCSYRNPQFSHLRVPVEKGRDIVEGMY 453 Query: 299 EKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD-HHNIVHDYPPK 350 ISG P Y + GK+ + N+ G + YP Sbjct: 454 GNISGDAIPRY---IATAGGKIPLHRSNVLDREQGDIILQKPWSGEQVRYPDA 503 >gi|189500343|ref|YP_001959813.1| radical SAM domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189495784|gb|ACE04332.1| radical SAM domain protein [Chlorobium phaeobacteroides BS1] Length = 434 Score = 322 bits (826), Expect = 6e-86, Method: Composition-based stats. Identities = 91/368 (24%), Positives = 164/368 (44%), Gaps = 46/368 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59 + R T + L I +EQI +K ++ Y + + NLI+ N P DPI R Sbjct: 3 KYRSYTADNLHTLPQYGEIPEEQIHIVKTVATVYPFRVNSYVTENLIDWSNIPEDPIFRL 62 Query: 60 FIPQKEELNILPEER--------------------------EDPIGDN-------NHSPL 86 PQ+E LN +R +P G ++ L Sbjct: 63 SFPQEEMLNPEDFQRMSGLVSTDAPQDIIRQAAREIQLLQNPNPAGQMELNTPLLDNEVL 122 Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 GI H+Y + +L VC YC +CFR + ++ D L Y++E ++ Sbjct: 123 HGIQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLESLKFANNDITLLLDYLKEHPEV 182 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196 ++IFTGGDP+++S ++K ++ L I V+ +R ++ P R E Sbjct: 183 KDIIFTGGDPMVMSTALIKKYIQPLLDIPTVKTIRIGTKALSWWPYRFTAEHDSDEILSF 242 Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + + +GK + I H +HP E + +A+ AI+R+ + G ++ SQS +++ +NDD +I Sbjct: 243 FEQIVSSGKHLAIMAHISHPREIETSQAVDAINRIRSTGAVIRSQSPIVRHVNDDADIWE 302 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 + + ++L I PYY+ +F + + E +I + +++SGL + + Sbjct: 303 AMWQKQLQLGIIPYYMFLERDTGPKQYFEIPLSEAVEIFNTAYQRMSGLGRTVRGPSMSC 362 Query: 316 GYGKVKID 323 GK+ + Sbjct: 363 APGKIIVQ 370 >gi|72160676|ref|YP_288333.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX] gi|71914408|gb|AAZ54310.1| L-lysine 2,3-aminomutase [Thermobifida fusca YX] Length = 453 Score = 322 bits (825), Expect = 6e-86, Method: Composition-based stats. Identities = 78/368 (21%), Positives = 152/368 (41%), Gaps = 46/368 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + R T +L +E+ I+ ++ + + + LI+ P+DPI R Sbjct: 16 RFRAYTSKHLDELTARAGFGEEERLAIRAVATVLPFRVNSYVIDELIDWDAAPDDPIYRL 75 Query: 60 FIPQKEEL--------------------------------NILPEERED-PIGDNNHSPL 86 PQ + L N P + + + P+ Sbjct: 76 TFPQADMLPEADVARIADLLRKDAPRQEINRVASEVRARLNPHPAGQLQLNLPKMDDEPM 135 Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+YP+ +L C YC +CFR + ++S + + +AY+++ ++ Sbjct: 136 PGVQHKYPETVLFFPKQGQTCHSYCTYCFRWAQFVGEPDLKMASDEIDRLVAYLRQHPEV 195 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPEL 196 V+ TGGDP+I+ L++ ++ L ++ ++ +R ++ PQR L Sbjct: 196 TGVLLTGGDPMIMGEAVLRRYIEPLLEVETLESIRIGTKALAYWPQRFVTDPDADDTLRL 255 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + + +GK + H +HP E + A+ R+ + G ++ +Q+ L++ IND E A Sbjct: 256 FEQVVNSGKNLAFMAHFSHPRELEPDIVREAVRRIRDTGAVIRTQAPLIRTINDSSETWA 315 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 + RT V L + PYY+ +F + + + +I +SGL + + Sbjct: 316 TMWRTQVRLGMIPYYMFVERDTGPQDYFAVPLAQAYEIFRKAYNSVSGLARTVRGPSMSA 375 Query: 316 GYGKVKID 323 GKV +D Sbjct: 376 TPGKVCVD 383 >gi|83648059|ref|YP_436494.1| lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396] gi|83636102|gb|ABC32069.1| Lysine 2,3-aminomutase [Hahella chejuensis KCTC 2396] Length = 348 Score = 321 bits (824), Expect = 1e-85, Method: Composition-based stats. Identities = 89/290 (30%), Positives = 145/290 (50%), Gaps = 2/290 (0%) Query: 33 NHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR 92 + + T + +P+DP+ Q +P E + DP+ + +++ KGI+ + Sbjct: 59 AQFPVRATRDYVRRMKKGDPSDPLLLQVLPLHLEQQEMIGYSADPLSEADYTASKGILQK 118 Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y R LL C ++CR+CFRR S+ S + ALA + + E+I +GG Sbjct: 119 YHGRALLITTSACAIHCRYCFRRHFPYSEHRQ--SRAQWKEALATLPGDGGVSEIILSGG 176 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 DPL+L++ L ++L + + + +R H+R+PI+ P RI+ L+ L + IH Sbjct: 177 DPLMLNNPVLDELLTLIAELPQISKVRLHTRLPIMLPDRIDQGLLDLLSNRPFKTIMVIH 236 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 ANH E A++RL ++L+Q+VLLKG+NDD LA L E + PYYLH Sbjct: 237 ANHGAELDASVEKALARLRPVVHMMLNQTVLLKGVNDDSSTLAALSERLFECGVTPYYLH 296 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 D G +HF E ++ +L+ K+ G P + ++PG K I Sbjct: 297 QLDKVQGAAHFDCGDERLSSLMQALRAKLPGYLVPRLVREIPGAPSKTPI 346 >gi|225849592|ref|YP_002729826.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1] gi|225646452|gb|ACO04638.1| L-lysine 2,3-aminomutase [Persephonella marina EX-H1] Length = 438 Score = 320 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 83/388 (21%), Positives = 158/388 (40%), Gaps = 50/388 (12%) Query: 1 MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIA 57 M+ R T+ + + + + ++Q +I+ + + + + + LIN +P NDPI Sbjct: 1 MRYRSYTVKNFRTIPQVEKYLTEKQKFDIEVVGQVFPFKVNNYVIDQLINWEDPLNDPIF 60 Query: 58 RQFIPQKE--------------------------------ELNILPEEREDPIGDNNHSP 85 R PQK+ ELN P ++ + + + Sbjct: 61 RLTFPQKDMLFPEHYELIARLLKNGEPQEKIREEANRIRMELNPHPAGQKYNVPEVDGIK 120 Query: 86 LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G H+Y + IL C YC FCFR + K+ + + YI+ + Sbjct: 121 LHGAQHKYKETILFFPKQGQTCHAYCSFCFRWPQFVGINELKFAMKEVDVLIEYIKRNPE 180 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINP------- 194 I +++FTGGDPLI+ L+ ++ + I H++ +R ++ P R Sbjct: 181 ITDILFTGGDPLIMKTSVLKSYIQPVLEANIPHLKTIRIGTKSLGFWPYRFTEDEDAQEL 240 Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +L + + + G + H NH E ++ A+ ++ G ++ +QS +L+ IND E Sbjct: 241 LDLFRQIVDRGYHLAFMAHFNHYKELRTDVVREAVDKILETGAVIRTQSPVLRHINDSSE 300 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 + A + + V + + PYY+ +F + + I +K SGL + Sbjct: 301 VWATMWKEQVSMGMIPYYMFMARDTGAQHYFGVPLVRAWNIFRDAYKKTSGLARTVKGPS 360 Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDH 340 + GKV+I + ++ + D Sbjct: 361 MSATPGKVRIL--GVSEIFGEKVMVLDF 386 >gi|189346964|ref|YP_001943493.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM 245] gi|189341111|gb|ACD90514.1| lysine 2,3-aminomutase YodO family protein [Chlorobium limicola DSM 245] Length = 323 Score = 320 bits (822), Expect = 2e-85, Method: Composition-based stats. Identities = 106/310 (34%), Positives = 166/310 (53%), Gaps = 7/310 (2%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFI 61 +L+H +T+ + L + + + I + +T A L++ NP+DP+ + I Sbjct: 5 RLKHDLITTQEQLAEYVTLTDAEKEGICRCRPIMPMKITRHYAELLDRDNPDDPLRKLAI 64 Query: 62 PQKEELNILPEEREDPIG--DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 P EEL P++ I + + P++GI+HRYP ++LL C +CRFCFR E V Sbjct: 65 PSVEELVRYPDDEAVDIHRDEAKYQPVEGIIHRYPGKVLLMYTTACFSHCRFCFRSEKV- 123 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + L + + A+ Y+++ I +VIFTGGDP+ + +RL+ L +R I HV+I+R Sbjct: 124 ---ASTLDGRRLDKAIEYLRKNESIRDVIFTGGDPMHGNPERLEHALYEVRSIPHVEIIR 180 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 +R PI P+ ELI+ L KP+ + HP E S+E + + RL++AGI+LL Sbjct: 181 ITTRAPIFAPEIFTDELIRMLSWF-KPLIMITSFIHPRELSDEVCSVLDRLSDAGIMLLQ 239 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Q +LKGINDD + L L V+ R PYY ++ G HF L E +K++ L+ Sbjct: 240 QGPILKGINDDVDTLRTLYEKLVQHRTMPYYATWGIVSPGNRHFTLDGESARKLIRQLEN 299 Query: 300 KISGLCQPFY 309 SG C P Sbjct: 300 TTSGFCIPHL 309 >gi|254427342|ref|ZP_05041049.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881] gi|196193511|gb|EDX88470.1| hypothetical protein ADG881_572 [Alcanivorax sp. DG881] Length = 463 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 90/391 (23%), Positives = 162/391 (41%), Gaps = 48/391 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + + T + + E + ++N + + N LIN N PNDPI + Sbjct: 34 RFKVYTARQLDKIEPLKRLDDETRFAMDVVANVLPFRVNEYVINELINWDNVPNDPIYQL 93 Query: 60 FIPQKEE-------------------------------LNILP-EEREDPIGDNNHSPLK 87 PQK LN P + E + + + + Sbjct: 94 TFPQKGMLAPEHFDKVAEAMRGGDKAEIKATIAEVREALNPHPAGQMEHNMPEVDGEKID 153 Query: 88 GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 G+ H+Y + +L VC YC FCFR +++K+ YIQ +I Sbjct: 154 GVQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKIATKEAGQLKKYIQAHPEIS 213 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELI 197 +V+ TGGDPL++ K L+ ++ L ++ ++ +R S+ PQR+ +L Sbjct: 214 DVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALTFWPQRVVSDADAQDLLDLF 273 Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 + + +GK + + H NH E ++ A A+ R+ G ++ +Q LL IND+ + A Sbjct: 274 EEVIASGKHLALMAHYNHWQELETDIAREAVKRVRATGAVIRAQGPLLAHINDNADDWAR 333 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L +T VEL I PYY+ +F + + + +I +++SG+ + + Sbjct: 334 LWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWEIYRDAMKQVSGIARTARGPSMSSH 393 Query: 317 YGKVKIDTHNIKKV-GNGSYCITDHHNIVHD 346 GKV+I + ++ G + + HD Sbjct: 394 PGKVEI--QGVTEINGEKVFALRFIQGRNHD 422 >gi|332297913|ref|YP_004439835.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense DSM 12168] gi|332181016|gb|AEE16704.1| lysine 2,3-aminomutase YodO family protein [Treponema brennaborense DSM 12168] Length = 357 Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats. Identities = 116/337 (34%), Positives = 181/337 (53%), Gaps = 29/337 (8%) Query: 28 IKEISNHYSIA------LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81 +K++ ++ L+P A + RQ++P EE N+LP E DP+G + Sbjct: 29 LKKVLERLYVSGQRDGDLSPFYA-----------LRRQYVPSIEEKNVLPCELSDPLGAH 77 Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 + +VH+Y +R+LL C YCR CFR S+K ++ + A AY+ Sbjct: 78 RYQITPRLVHQYKNRVLLLTTARCFAYCRHCFR-RTYTSRKQGFITDAECGEACAYLSSH 136 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 ++ E++F+GGDPL S+ L+++++ +R + ++R +R PI +P+R + ELI K Sbjct: 137 PEVQEILFSGGDPLTASNDALRQLIRRVRRARPGILIRICTRAPIAEPERFDSELIALFK 196 Query: 202 EAGKPVYIAIHANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 E P+++ H NHP E S E+ A+S L +AGI + SQ+VLL+G+ND +LA L Sbjct: 197 E-NAPLWVIPHVNHPAEISNRFSPESYRALSGLVSAGIPVQSQTVLLRGVNDSVPVLAQL 255 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 + IKP YL DLA GTSH R+ I EG K+ L+ ++SGL P Y +DLPGG Sbjct: 256 FHELTCMGIKPGYLFQGDLAPGTSHLRVPIREGVKLYERLRGELSGLSTPVYAVDLPGGG 315 Query: 318 GKV---KIDTHNIK---KVGNGSYCITDHHNIVHDYP 348 GK+ ++D ++ Y TD + YP Sbjct: 316 GKINLLQLDPELLRTGVSQNGNDYLFTDANGNGWTYP 352 >gi|320537569|ref|ZP_08037507.1| KamA family protein [Treponema phagedenis F0421] gi|320145571|gb|EFW37249.1| KamA family protein [Treponema phagedenis F0421] Length = 342 Score = 320 bits (820), Expect = 2e-85, Method: Composition-based stats. Identities = 110/331 (33%), Positives = 169/331 (51%), Gaps = 9/331 (2%) Query: 25 IDEIKEISNHYSIALTPVIANLINPHNPNDP--IARQFIPQKEELNILPEEREDPIGDNN 82 + I A++P LI D + RQ + E LP E DP+G++ Sbjct: 13 ESAAESIKLRLPEAVSPAFIRLIEEAEEADAKALRRQVFAAETEKISLPYESADPLGESR 72 Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 + +VH+Y +R+L+ C YCR+CFRR ++G + + + E Y+++ Sbjct: 73 YCVTPFLVHQYTNRVLMLTSGRCLSYCRYCFRRGFTARRQGWIPDT-EIEKITDYLKQNP 131 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 I E++ +GGDP+ + +L+ +LK LR ++R +R PI P+ EL+Q LK Sbjct: 132 DIKEILVSGGDPMSGTLGQLEALLKRLRQTSPELLIRLCTRAPIFAPELFTEELLQLLK- 190 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 + KP++I H NHP E E AI NAG+ + SQSVLL+G+N+ E L L T V Sbjct: 191 SMKPLWIIPHINHPAELGFEQKKAIDSCINAGLPMQSQSVLLRGVNNSVETLCALFHTLV 250 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + +KP YL DLA GT+ FR+ + + I L++K+SGL P + +DLPGG GK + Sbjct: 251 CMGVKPGYLFQMDLAPGTAEFRVPLSQALGIWRELRKKLSGLSLPQFAVDLPGGGGKFPL 310 Query: 323 DT-----HNIKKVGNGSYCITDHHNIVHDYP 348 +KK S+ V+ YP Sbjct: 311 SILALYDTIVKKDDADSFSALGLDGKVYTYP 341 >gi|152990665|ref|YP_001356387.1| hypothetical protein NIS_0919 [Nitratiruptor sp. SB155-2] gi|151422526|dbj|BAF70030.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2] Length = 425 Score = 319 bits (819), Expect = 4e-85, Method: Composition-based stats. Identities = 87/386 (22%), Positives = 154/386 (39%), Gaps = 49/386 (12%) Query: 1 MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIA 57 M+ R S + + + E I+ I+ + + + + + LI+ N NDPI Sbjct: 1 MEYRAYNAKSFKKIPQIQKYLSHEDIENIEIAALVFPFKVNNYLIDKLIDWENYQNDPIF 60 Query: 58 RQFIPQKEE-------------------------------LNILPEEREDPIGDNNHSPL 86 R P K+ +N P +++ + N L Sbjct: 61 RLVFPHKDMLLEQDFERLKALYHKGDQKALSETVYEIRMRMNPHPADQKSNVPTINDKEL 120 Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G H+Y + IL C YC FCFR + K+ + + YI+ I Sbjct: 121 TGSQHKYKETILFFPKQGQTCHAYCSFCFRWPQFTGMNELKFAMKEVDLLIEYIKAHPTI 180 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195 ++IFTGGDPLI+S K L+ ++ + I H+Q +RF ++ P R + Sbjct: 181 TDLIFTGGDPLIMSTKLLRSYIEPILKADIPHLQNIRFGTKTLGFWPYRFLTDSDADDLL 240 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L + + E G + H NH E ++E A+ R+ G I+ +Q+ +L+ IND E+ Sbjct: 241 KLFEEIVEHGYHLAFMAHFNHYRELQTDEVEKAVKRIQQTGAIIRTQAPILRHINDSSEV 300 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 + R V + + PYY+ +F + + E KI +SGL + + Sbjct: 301 WEKMWRKQVHMGMVPYYMFIARDTGAQHYFGVPLVEAWKIFKDAISNVSGLARTVRGPSM 360 Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITD 339 GK+ + + ++ + + Sbjct: 361 SAAPGKIAVS--GVSEINKEKVIVLN 384 >gi|301166000|emb|CBW25574.1| conserved hypothetical protein [Bacteriovorax marinus SJ] Length = 340 Score = 318 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 130/351 (37%), Positives = 190/351 (54%), Gaps = 19/351 (5%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q ++ ++ + L + Q ++ + + + A I + P+A Q Sbjct: 4 WQSEYRDSIKTHAALEEFF---EAQFPKVD-----FPLLIPRKFATHIKKAGLDSPLANQ 55 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 F+PQ E N L E DPIGD+N SPL IVHRY +RIL VCPV CR+CFR+ +G Sbjct: 56 FLPQVSE-NDLGGES-DPIGDHNQSPLAQIVHRYENRILFFPTQVCPVICRYCFRKNELG 113 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + E L Y+++ S+I E+IF+GGDPLILS +R++ L + I H++ +R Sbjct: 114 TNDELF--KANFEKVLEYLKQHSEINEIIFSGGDPLILSDERIEFYLNEFKKIPHIKFIR 171 Query: 180 FHSRVPIVDPQRINPELIQC---LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 FH+R PI+ P RI + K+ + IH NH EF+EE A+S L Sbjct: 172 FHTRTPIILPSRITENFCKIIENFKKDFLQINFIIHVNHSQEFNEENKVALSLLHAHCSN 231 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 LLSQSVLLKG+N+ + L L+ ++L I+PYYLHHPD G HF LT+EEG+ + A+ Sbjct: 232 LLSQSVLLKGVNNSKQALLKLIDELIKLNIRPYYLHHPDKVKGGLHFMLTLEEGRNLYAT 291 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 L+ + G P YI+D+PGG GKV + + N S + + Y Sbjct: 292 LRNHLPGWALPQYIIDIPGGEGKV---SAYNPETYNFSGHLINRKGTKVPY 339 >gi|148244460|ref|YP_001219154.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA] gi|146326287|dbj|BAF61430.1| lysine 2,3-aminomutase [Candidatus Vesicomyosocius okutanii HA] Length = 314 Score = 318 bits (817), Expect = 5e-85, Method: Composition-based stats. Identities = 92/279 (32%), Positives = 149/279 (53%), Gaps = 6/279 (2%) Query: 34 HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRY 93 + I + A LI+ N +DP+ +Q I K L+ P+ D +SP+ G++H+Y Sbjct: 32 TFPIKIPMEFARLIDKRNKDDPLLKQVITPKN-LSKSTNFSLSPLEDEKYSPVAGLIHKY 90 Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P+R+LL VC ++C+FCFR+ + + + + + YI +I EVI +GGD Sbjct: 91 PNRVLLIASQVCAIHCQFCFRQNFNYVEHDAISNWVEIQ---NYIINDVKINEVILSGGD 147 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL LS +L ++ + +I+H++ LR H+R +V+P RI +L++ ++ + I +H Sbjct: 148 PLSLSDDKLSTLIDNIAHIEHIKTLRVHTRNAVVEPSRITRKLVEIFNQSRLNIVIVLHI 207 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NH E S + I L + LLSQSVLL+G+ND E+L L + +L I PYYLH Sbjct: 208 NHAQELSVQFAQKIIELTR--VTLLSQSVLLRGVNDSIEVLTELCLSLFDLGILPYYLHM 265 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 D G F + + ++ LK +SG P + D Sbjct: 266 LDKVQGAQDFLVKDDYAIQLHQQLKSNLSGYLVPKLVRD 304 >gi|325475292|gb|EGC78477.1| hypothetical protein HMPREF9353_00492 [Treponema denticola F0402] Length = 338 Score = 318 bits (816), Expect = 7e-85, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 170/340 (50%), Gaps = 14/340 (4%) Query: 15 YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND--PIARQFIPQKEELNILPE 72 N + + ++ + ++ LI P D + Q P E + Sbjct: 4 KNWREFSAAETADFEQ-----PVLISSAFQKLIEEAEPEDSKALRLQVEPSACEKTVCSY 58 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 E DP+G+ + +VH+Y +R+LL C YCR+CFRR + + + + + + Sbjct: 59 ETADPLGEQKYCITPYLVHQYENRVLLITTGKCLSYCRYCFRRGLTSRSQ-SYIGDGELK 117 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 YI++ Q+ E++ +GGDPL K+L+KVL LR IK ++R +R PI P+ Sbjct: 118 EVTDYIKKMPQVTEILVSGGDPLSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELF 177 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 EL+ LK+ KP+++ H NHP E E A++ AGI + SQ+VLLKG+ND+ + Sbjct: 178 TEELLHLLKKT-KPLWLIPHINHPAELGAEQTNALNACIEAGIPIQSQTVLLKGVNDNEK 236 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 L L + IKP YL D AAGTSHFR+ ++E + + K+SGL +P + D Sbjct: 237 TLIKLFHKLTCMGIKPGYLFQLDPAAGTSHFRVPLKEALDLWERAEPKLSGLSRPQFAAD 296 Query: 313 LPGGYGKVKIDT-----HNIKKVGNGSYCITDHHNIVHDY 347 LPGG GK + I++ + S+ ++H Y Sbjct: 297 LPGGGGKFSLSALIYSKKIIEQKEDSSFSALGADGVIHKY 336 >gi|46445864|ref|YP_007229.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia amoebophila UWE25] gi|46399505|emb|CAF22954.1| simlar to L-lysine 2,3-aminomutase [Candidatus Protochlamydia amoebophila UWE25] Length = 347 Score = 318 bits (816), Expect = 7e-85, Method: Composition-based stats. Identities = 104/325 (32%), Positives = 166/325 (51%), Gaps = 7/325 (2%) Query: 1 MQL-RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 +L + K T+ + L + + EQ ++ + ++I + +A + + DP+ +Q Sbjct: 27 WRLIQRKNFTNLKILADFLALNFEQRKQLLD-KPTFAINVPYRLAQKMTKGSLEDPLVKQ 85 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 F+P K E +DP+GD ++H+Y R+LL C ++CR+CFR+ Sbjct: 86 FLPFKSEFENHNLFVQDPVGDEQCRRTAQLLHKYRGRVLLVCTSACAMHCRYCFRQNFSY 145 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + L I++ S I EVI +GGDPL LS+ L K+ + L I H++ +R Sbjct: 146 QSHDKTFLKE-----LDLIRQDSSIHEVILSGGDPLSLSNDILAKLFEELNGISHLKRIR 200 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 FH+R PI P+RI+ + ++ K ++ IH NHP E E+ + L G +LL+ Sbjct: 201 FHTRFPIGIPERIDKGFLNIIENCPKQIFFVIHCNHPLELDEDIFERLKALHLRGCVLLN 260 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLKG+ND E+L L + I PYYLH D G SHF L +EG ++ L + Sbjct: 261 QSVLLKGVNDRIEVLEELCELLSDHGIIPYYLHQLDRVKGASHFELGEKEGAALIQELSK 320 Query: 300 KISGLCQPFYILDLPGGYGKVKIDT 324 ++SG P Y+ ++ G K I Sbjct: 321 RLSGYAIPRYVREIAGEAHKTPIQL 345 >gi|110834678|ref|YP_693537.1| L-lysine 2,3-aminomutase [Alcanivorax borkumensis SK2] gi|110647789|emb|CAL17265.1| L-lysine 2,3-aminomutase, putative [Alcanivorax borkumensis SK2] Length = 462 Score = 318 bits (816), Expect = 8e-85, Method: Composition-based stats. Identities = 92/391 (23%), Positives = 161/391 (41%), Gaps = 48/391 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + + T + + E + ++N + + N LIN N PNDPI + Sbjct: 34 RFKVYTARQLDKIEPLQRLDDETRFAMDVVANVLPFRVNEYVINELINWDNVPNDPIYQL 93 Query: 60 FIPQKEE-------------------------------LNILP-EEREDPIGDNNHSPLK 87 PQK LN P + E I + + ++ Sbjct: 94 TFPQKGMLAPEHFDKVADAMRGGDKTAIKTAIAEVREALNPHPAGQMEHNIPEVDGEKIE 153 Query: 88 GIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 GI H+Y + +L VC YC FCFR +++K+ YIQ +I Sbjct: 154 GIQHKYNETVLFFPSQGQVCHSYCTFCFRWAQFIGDNDLKIATKEAGQLKKYIQAHPEIS 213 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LI 197 +V+ TGGDPL++ K L+ ++ L ++ ++ +R S+ PQR+ + L Sbjct: 214 DVLITGGDPLVMKTKNLRAHIEPLLELEQIRTIRIGSKALTFWPQRVVSDADAKDLLHLF 273 Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 + + +GK + + H NH E + A A+ R+ G ++ +Q LL IND+ + A Sbjct: 274 EEVIASGKHLALMAHYNHWQELQTNIAREAVKRVRATGAVIRAQGPLLAHINDNADDWAR 333 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L +T VEL I PYY+ +F + + + I +++SG+ + + Sbjct: 334 LWQTQVELGIIPYYMFVERDTGARHYFEVPLAKAWNIYRDAMKQVSGIARTARGPSMSSH 393 Query: 317 YGKVKIDTHNIKKV-GNGSYCITDHHNIVHD 346 GKV+I + ++ G + + HD Sbjct: 394 PGKVEI--QGVTEINGEKVFALRFIQGRNHD 422 >gi|108759631|ref|YP_634392.1| hypothetical protein MXAN_6263 [Myxococcus xanthus DK 1622] gi|108463511|gb|ABF88696.1| conserved hypothetical protein [Myxococcus xanthus DK 1622] Length = 442 Score = 318 bits (815), Expect = 9e-85, Method: Composition-based stats. Identities = 81/369 (21%), Positives = 149/369 (40%), Gaps = 47/369 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + R T +L + ++ ++ +++ + + LI+ P DPI R Sbjct: 16 RYRAYTTRHLDELTTRAGLSADERLAVQAVAHVLPFRTNSYVVDELIDWAAAPADPIYRL 75 Query: 60 FIPQKEEL--------------------------NILPEEREDPIGD--------NNHSP 85 PQ + L I P G N P Sbjct: 76 VFPQADMLPTEDVARMVDLLSSGASPLELNAAANEIRARLNPHPAGQMQLNVPKLANEEP 135 Query: 86 LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 + G+ H+Y + +L+ C YC +CFR +S++ E + YI+ + Sbjct: 136 VPGLQHKYKETVLIFPKQGQTCHAYCTYCFRWAQFVGDADLKFASREIEPLVNYIRAHPE 195 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-------- 195 + V+FTGGDP+I++ L K ++ L I+H++ +R ++ PQR + Sbjct: 196 VTNVLFTGGDPMIMTEAVLAKYIEPLLDIEHLEAIRIGTKALAYWPQRFVTDSDADDILR 255 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 L + + +GK + H +HP E E A+ R+ G ++ +Q+ L++ IND P Sbjct: 256 LFEKVVASGKSLAFMAHFSHPNEMVPEIVQEAVRRIRGTGAVIRTQAPLIRTINDTPGTW 315 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 ++ RT + + PYY+ +F + + E I + + +SGL + + Sbjct: 316 ESMWRTHLRHGMVPYYMFVERDTGPQDYFAVPLAEAYDIFRNAFQSVSGLARTVRGPSMS 375 Query: 315 GGYGKVKID 323 GKV +D Sbjct: 376 ATPGKVCVD 384 >gi|308049116|ref|YP_003912682.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799] gi|307631306|gb|ADN75608.1| L-lysine 2,3-aminomutase [Ferrimonas balearica DSM 9799] Length = 452 Score = 314 bits (806), Expect = 1e-83, Method: Composition-based stats. Identities = 87/371 (23%), Positives = 150/371 (40%), Gaps = 50/371 (13%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + + + N + + E+K +++ + +AN LI+ N P DPI + Sbjct: 17 RFKVYQQRQLDKIELVNRLPEALKFEMKVVASVLPFRVNEYVANDLIDWDNLPADPIFQL 76 Query: 60 FIPQK--------------------------------EELNILP-EEREDPIGDNNHSPL 86 PQK E+N P + + + + L Sbjct: 77 SFPQKGMLAPEAFERMATLLRQNPSPQQVFELGQTLRAEMNPHPAGQMSMNVPELDGEKL 136 Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + L C YC FCFR K +S D + Y+ +I Sbjct: 137 PGMQHKYKETALFFPAQGQYCHSYCTFCFRWAQFVG-KAMRFNSNDADTLHRYLAAHPEI 195 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPE------ 195 +++ TGGDP+++ ++ + ++ L HVQ +RF ++ P R + Sbjct: 196 SDLLITGGDPMVMKTTKIAQYVEPLIDNPDTEHVQTVRFGTKALTFWPYRFVTDDDADEL 255 Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 L + L +AGK V I H NH E + A+ R+ G + +Q+ LLK IND+ + Sbjct: 256 LALFRRLVKAGKHVSIMAHLNHWQEMETPIFEEAVRRIRATGANIRAQAPLLKNINDNAD 315 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 A + + V+L I PYY+ +F + + + +I K+SGL + Sbjct: 316 DWARMWQKQVKLGIIPYYMFVERDTGPKRYFEVPLYQAYEIYRDAISKVSGLARTARGPS 375 Query: 313 LPGGYGKVKID 323 + G GKV+I Sbjct: 376 MSAGPGKVEIQ 386 >gi|42525588|ref|NP_970686.1| hypothetical protein TDE0069 [Treponema denticola ATCC 35405] gi|41815599|gb|AAS10567.1| conserved hypothetical protein TIGR00238 [Treponema denticola ATCC 35405] Length = 338 Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats. Identities = 107/340 (31%), Positives = 173/340 (50%), Gaps = 14/340 (4%) Query: 15 YNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND--PIARQFIPQKEELNILPE 72 N + + ++ + ++ LI P D + Q P E + Sbjct: 4 KNWREFSAAETADFEQ-----PVLISSAFQKLIEESEPEDSNALLLQVEPSACEKTVCSY 58 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 E DP+G+ + +VH+Y +R+LL C YCR+CFRR + + + + + + Sbjct: 59 ETADPLGEQKYCITPYLVHQYENRVLLITTGKCLSYCRYCFRRGLTARSQ-SYIGDGELK 117 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 A YI++ Q+ E++ +GGDPL K+L+KVL LR IK ++R +R PI P+ Sbjct: 118 AVTDYIKKMPQVTEILVSGGDPLSGGFKKLEKVLDGLRTIKEDLLIRLCTRAPIFAPELF 177 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 EL+ LK+ KP+++ H NHP E +E A++ AGI + SQ+VLLKG+ND+ + Sbjct: 178 TEELLHLLKKT-KPLWLIPHINHPAELGKEQTNALNACIEAGIPIQSQTVLLKGVNDNEK 236 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 L L + IKP YL D AAGTSHFR+ ++E + ++ K+SGL +P + +D Sbjct: 237 TLIKLFHKLTCMGIKPGYLFQLDPAAGTSHFRVPLKEALDLWERVEPKLSGLSRPQFAVD 296 Query: 313 LPGGYGKVKIDT-----HNIKKVGNGSYCITDHHNIVHDY 347 LP G GK + I++ + S+ ++H Y Sbjct: 297 LPEGGGKFSLSALIYSKKIIEQKEDSSFSALGADGVIHKY 336 >gi|30249230|ref|NP_841300.1| hypothetical protein NE1247 [Nitrosomonas europaea ATCC 19718] gi|30180549|emb|CAD85158.1| DUF160 [Nitrosomonas europaea ATCC 19718] Length = 452 Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats. Identities = 91/390 (23%), Positives = 161/390 (41%), Gaps = 49/390 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + + T + KEQ E+ ++N + + + LI+ +N P DP+ + Sbjct: 20 RFQVYTERQLDKIRPLERFTKEQRFEMHVVANVLPFRVNQYVIDELIDWNNIPADPVFQL 79 Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHS-------PL 86 PQ+ L ER P G + PL Sbjct: 80 TFPQRNMLEPEDFERMAEALRRDAQRSEIQAIAVDIRSKLNPHPAGQQEMNVPVFHGEPL 139 Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G H+Y + +L VC YC FCFR K +S + Y+ + Sbjct: 140 PGTQHKYRETVLFFPSQGQVCHSYCTFCFRWAQFIGDKELRFASNEAGNLHKYLAGHKDV 199 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQR-INPE------ 195 +++ TGGDP+++ L+ L+ + ++HVQ +R ++ PQR + E Sbjct: 200 TDLLMTGGDPMVMKTHHLKAYLEAMLRPALEHVQNIRIGTKSLTFWPQRYVTDEDAHELL 259 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L++ L +AGK V + H NH E + A+ R+ AG+++ +Q+ +++ INDDP + Sbjct: 260 ALLERLVKAGKHVALMAHFNHWREMDTPIVREAVRRIRAAGVVIRAQAPIVRNINDDPAV 319 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A + RT V + I PYY+ +F + +E +I +++SGL + + Sbjct: 320 WAKMWRTQVGMGIIPYYMFVERDTGAKRYFEVPLERTYQIYREAIQQVSGLARTVRGPSM 379 Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 G GKV+I ++ G + + Sbjct: 380 SAGPGKVEIQG-IVELNGEKIFILRFIQGR 408 >gi|319790052|ref|YP_004151685.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio ammonificans HB-1] gi|317114554|gb|ADU97044.1| lysine 2,3-aminomutase YodO family protein [Thermovibrio ammonificans HB-1] Length = 343 Score = 313 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 104/347 (29%), Positives = 178/347 (51%), Gaps = 7/347 (2%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 + +TS + L + + + + + Y + T A L + + R +P E Sbjct: 2 RVITSLEALEGLLPLSPREREAFRAVVPVYPFSTTEYYARL---AAESFAVRRMLLPSLE 58 Query: 66 ELNILPE--EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 ELN + DP+ + + HRYPDR+L+ + CPV CRFC R+ + Sbjct: 59 ELNPELQNLGEPDPLREERDRKAPCLTHRYPDRVLVVTTNYCPVLCRFCMRKRNW-RRPL 117 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 +S + +A L+Y++ Q+ +V+ +GG+PL+L + L+++L L+ I+ V+++R +R Sbjct: 118 FTISEDEVDAVLSYVRRNPQVRDVLISGGEPLLLPLELLERLLLGLKKIESVEVVRIGTR 177 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 +P+V+P + + L E + V++ H NHP E + EA A+ L G+ + +Q+VL Sbjct: 178 LPVVEPSAVLRSELLSLLERAQKVWVNTHFNHPDELTAEAAEAVKALLKCGVPVNNQTVL 237 Query: 244 LKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 LKG+ND +L L R ++++PYYL H D G HF I G K++ L+ ++S Sbjct: 238 LKGVNDSVSVLERLFRGLQRIKVRPYYLFHCDPVEGVMHFSTPISLGLKLLEELQTRLSP 297 Query: 304 LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 L P+Y +D PGGYGKV + +K+G Y P + Sbjct: 298 LALPYYAVDGPGGYGKVPMLPVRFEKLG-SVYRFRSFSGRYFTMPDR 343 >gi|56477547|ref|YP_159136.1| hypothetical protein ebA3745 [Aromatoleum aromaticum EbN1] gi|56313590|emb|CAI08235.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1] Length = 462 Score = 313 bits (804), Expect = 2e-83, Method: Composition-based stats. Identities = 93/390 (23%), Positives = 164/390 (42%), Gaps = 50/390 (12%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60 + T + + + Q E+K +S+ + + + LI+ N P DP+ + Sbjct: 24 FKVYTQRDFDQIVPLAKLSEAQRFEMKVVSSVLPFRVNQYVIDELIDWDNIPADPMFQLT 83 Query: 61 IPQK--------------------------------EELNILPEERE--DPIGDNNHSPL 86 PQ+ ELN P ++ + D + + L Sbjct: 84 FPQRGMLAPEHFDRIATLLEHGADKKDVDAAVDAVRHELNPHPADQMEMNMPRDEHGNRL 143 Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 +GI H+Y + +L C YC FCFR K ++S + E AY++ ++ Sbjct: 144 EGIQHKYRETVLFFPSQGQTCHSYCTFCFRWAQFVGDKELRIASSEAETLHAYLRHHCEV 203 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195 +++FTGGDP+++ + L+ L+ L H+Q +R ++ P R Sbjct: 204 TDLLFTGGDPMVMKTRHLRDYLEPLLKPEFDHIQTIRIGTKALTFWPHRFLGADDADELI 263 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEEA-IAAISRLANAGIILLSQSVLLKGINDDPEI 253 L++ L EAGK V + H NH E EA AA+ RL AG+++ Q L+ +NDDP++ Sbjct: 264 ALLERLTEAGKHVALMTHFNHWKELDTEATQAAVRRLRKAGVVIRGQGPLIAHLNDDPDV 323 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A + +T V L I PYY+ ++F + + +I +++SGL + + Sbjct: 324 WARMWKTQVRLGILPYYMFVERDTGARNYFEVPLVRAWEIYRDAMQQVSGLGRTARGPSM 383 Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 GKV+I + G + + Sbjct: 384 SASPGKVEIQGV-TEVAGEKVFVLRFIQGR 412 >gi|163756014|ref|ZP_02163131.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1] gi|161324185|gb|EDP95517.1| lysine 2,3-aminomutase related protein [Kordia algicida OT-1] Length = 418 Score = 313 bits (803), Expect = 2e-83, Method: Composition-based stats. Identities = 100/382 (26%), Positives = 163/382 (42%), Gaps = 50/382 (13%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59 + + TL + + + + +EQ++EIK +S+ Y + NLI+ +N PNDPI R Sbjct: 3 KFKSYTLNKLEKIPQLSGLSEEQMEEIKIVSSIYPFKTNNYVLENLIDWNNIPNDPIFRL 62 Query: 60 FIPQKEELNILPEER-------------------------EDPIGDNNHS-------PLK 87 P KE L E+ P G + L+ Sbjct: 63 NFPHKEMLIPEHFEQLKRVRATGTKEELKEVIYNIRMKLNPHPAGQKELNGAFLEEKKLE 122 Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 GI H+Y D +L C YC FCFR + + SK+ + L Y+ E QI Sbjct: 123 GIQHKYKDILLFFPSQSQTCHAYCTFCFRWPQFINDLDFKIQSKEIDPLLKYLSENPQIT 182 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LI 197 EV+FTGGDP+I++ + L ++ L + ++ +R ++ P + + ++ Sbjct: 183 EVLFTGGDPMIMNSRVLDSYIEPLLKVDSIKTIRIGTKALSYWPYKFTTDEDAEGMLNVL 242 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 + + +AGK + H NHP E AI +L + G ++ +QS LL+ IN+D + Sbjct: 243 RKITKAGKHLGFMAHFNHPKELEPPVVKEAIDKLRSIGAVIRTQSPLLRFINNDAKTWTT 302 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 + V+L PYY+ P +F T+E K+ SGL + Sbjct: 303 MWEKQVQLGCIPYYMFLPRDTGAQHYFAETLENAHKLYTEAIRNCSGLASTAKGPVMSMT 362 Query: 317 YGKVKIDTHNIKKVGNGSYCIT 338 +GKV+I V N SY + Sbjct: 363 HGKVEI-----LGVKNNSYTLR 379 >gi|56460615|ref|YP_155896.1| lysine 2,3-aminomutase related protein enzyme [Idiomarina loihiensis L2TR] gi|56179625|gb|AAV82347.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina loihiensis L2TR] Length = 448 Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats. Identities = 92/369 (24%), Positives = 159/369 (43%), Gaps = 52/369 (14%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60 +H+ L + L + + E+K ++N + + N LI+ N PNDP+ + Sbjct: 20 YQHRQLDKIEALKK---VPDDMRFEMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLT 76 Query: 61 IPQKEELNILPEER--------------------------EDPIGDNNHS-------PLK 87 PQK+ L +R P G + PL Sbjct: 77 FPQKDMLEPSAYQRMADLMSGKHTTNEVFDLATQLRDEMNPHPAGQMQMNVPHVDGEPLP 136 Query: 88 GIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 G+ H+Y + +L C YC FCFR K T +S D + Y+ + ++ Sbjct: 137 GMQHKYRETVLFFPAQGQYCHSYCTFCFRWAQFVG-KATRFNSNDADQLHRYLAQHKEVT 195 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195 +++ TGGDP+++ ++L L+ L +H++ +R ++ P R + Sbjct: 196 DLLVTGGDPMVMRTRKLAHYLEGLLQPEFEHIKTIRIGTKSLTFWPYRFITDPDADDLLR 255 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEIL 254 L++ L + GK V I H NHP E E AI RL G+ + Q+ LLK INDDP++ Sbjct: 256 LLERLVDGGKHVSIMAHLNHPNELRTEVCQEAIRRLRATGVQIRCQAPLLKHINDDPDVW 315 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 A++ V+L + PYY+ +F + +E +I +++SG+ + + Sbjct: 316 ASMWEKQVQLGLIPYYMFVERDTGAKRYFEVPLERTWEIFQKAYQQVSGIARTVRGPSMS 375 Query: 315 GGYGKVKID 323 G GKV++ Sbjct: 376 AGPGKVEVQ 384 >gi|149377740|ref|ZP_01895474.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893] gi|149357966|gb|EDM46454.1| hypothetical protein MDG893_01830 [Marinobacter algicola DG893] Length = 241 Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats. Identities = 88/242 (36%), Positives = 133/242 (54%), Gaps = 2/242 (0%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 P G++ +Y R LL + C + CR+CFRR + LS +D A+ + E ++ Sbjct: 1 MPATGLIRKYDSRALLMVTGQCAINCRYCFRRHFPY--EDHRLSPEDRTQAIKTLSEDTR 58 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 + EVIF+GGDPL+ + + L + L I H++ LR H+R+P+V PQR+ LI+ L + Sbjct: 59 LNEVIFSGGDPLVANDRLLSAWAEALAAIPHIRRLRVHTRLPVVIPQRVTDSLIKWLSGS 118 Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 + IH NHP E + A+ RL AGI LL+QSV+LKG+ND+ +LA L E Sbjct: 119 RLQAVVVIHVNHPAELDADTQRALERLKAAGITLLNQSVVLKGVNDNARVLAELSERLFE 178 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + PYYLH D AG HF ++ + + +V L + G P + ++PG GK +D Sbjct: 179 CGVLPYYLHAFDPVAGAHHFEVSDNKARDLVRQLITLLPGFLVPRLVREIPGQSGKTPLD 238 Query: 324 TH 325 Sbjct: 239 LF 240 >gi|85711269|ref|ZP_01042328.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica OS145] gi|85694770|gb|EAQ32709.1| Lysine 2,3-aminomutase related protein enzyme [Idiomarina baltica OS145] Length = 457 Score = 312 bits (800), Expect = 5e-83, Method: Composition-based stats. Identities = 88/369 (23%), Positives = 158/369 (42%), Gaps = 52/369 (14%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60 +H+ L + L + + E+K ++N + + N LI+ N PNDP+ + Sbjct: 29 YQHRQLDKIEALKR---VPDDIRFEMKVVANVLPFRVNEYVFNELIDWENVPNDPLFQLT 85 Query: 61 IPQKE--------------------------------ELNILP-EEREDPIGDNNHSPLK 87 PQK+ E+N P + + + + PL Sbjct: 86 FPQKDMLDPSAFQRMADLMSGKHTTNEVFDLATQLRQEMNPHPAGQMQMNVPHVDGEPLP 145 Query: 88 GIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 G+ H+Y + +L C YC FCFR K T +S D + Y+ + ++ Sbjct: 146 GMQHKYRETVLFFPAQGQYCHSYCTFCFRWAQFVG-KATRFNSNDADQLHRYLAQHKEVT 204 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195 +++ TGGDP+++ ++L+ L+ L H++ +R ++ P R + Sbjct: 205 DLLVTGGDPMVMRTRKLKHYLEGLLQPEFDHIKTIRIGTKALTFWPYRFITDPDADELMR 264 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEIL 254 L++ L GK V I H NH E E AI RL G + Q+ LL+ INDDP++ Sbjct: 265 LLEKLVRGGKHVSIMAHLNHHNELRTEVCEEAIRRLRATGAQIRCQAPLLRHINDDPKVW 324 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 A++ V+L + PYY+ +F + +E ++ +++SG+ + + Sbjct: 325 ADMWEREVQLGMIPYYMFVERDTGAKRYFEVPLERTWEVFQQAYQQVSGIARTVRGPSMS 384 Query: 315 GGYGKVKID 323 G GKV++ Sbjct: 385 AGPGKVEVQ 393 >gi|313680789|ref|YP_004058528.1| l-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977] gi|313153504|gb|ADR37355.1| L-lysine 2,3-aminomutase [Oceanithermus profundus DSM 14977] Length = 432 Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats. Identities = 77/361 (21%), Positives = 147/361 (40%), Gaps = 45/361 (12%) Query: 7 TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQFIPQK 64 TL + + + E++ + P + + LI+ P DPI + PQ+ Sbjct: 16 TLKNIHRHPAYRRLPESLRRELEVAAQVLPFRTNPYVLDELIDWDRAPEDPIFQLVFPQR 75 Query: 65 EE-------------------------------LNILP-EEREDPIGDNNHSPLKGIVHR 92 +N P + + + + L G+ H+ Sbjct: 76 GMLDSETYARVEAALTSGDREALVEAVWNARRAMNPHPAGQLTHNVPELDGRKLDGLQHK 135 Query: 93 YPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 Y + +L C YC +CFR + S + + Y++ ++ +V+ T Sbjct: 136 YAETVLFFPAGGQTCHAYCTYCFRWAQFVGDRELKFESSQVDDLVRYLRAHPEVTDVLVT 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKE 202 GGDP+++ + L + L+ L ++ ++ +R S+ P R + L + + Sbjct: 196 GGDPMVMKTRLLARYLEPLLEVETLRTIRIGSKSLAYWPMRFTTDPDAAEVLRLFERVAA 255 Query: 203 AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 AGK + H +HP E +E+ AAI L G ++ +Q+ L++ +NDD ++ A R Sbjct: 256 AGKQLAFMAHFSHPRELETEQVQAAIQNLLATGAVVRTQAPLIRHVNDDADVWAEKWRRE 315 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 V L + PYY+ +F + + E Q+I A ++SGL + + GKV+ Sbjct: 316 VRLGLIPYYMFVERDTGPKRYFEVPLAEAQRIFADAYRQVSGLARTVRGPSMSAFPGKVR 375 Query: 322 I 322 + Sbjct: 376 V 376 >gi|111025433|ref|YP_707853.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1] gi|110824412|gb|ABG99695.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1] Length = 442 Score = 310 bits (794), Expect = 2e-82, Method: Composition-based stats. Identities = 92/388 (23%), Positives = 167/388 (43%), Gaps = 51/388 (13%) Query: 1 MQLRHKTLTSAQ--DLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINP-HNPNDPI 56 M+ R +T Q DL + +++ E++ ++N + + + LI+ P+DPI Sbjct: 1 MKNRMRTFRGVQLADLPQLDQFTEQERHEMRVVANLLPFRVNNYVLDELIDWSSAPDDPI 60 Query: 57 ARQFIPQKEE--------------------------------LNILP-EEREDPIGDNNH 83 R P +E LN P +RE + + Sbjct: 61 FRMTFPAREMVPPRIYDLVSDALSNGVDRKQLQAIAQKCRQDLNPHPSGQREHNVPLLDG 120 Query: 84 SPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 P+ G+ H+Y +L+ C YC +CFR ++ + Y++ Sbjct: 121 EPVAGLQHKYRQTLLVFPSQGQTCHSYCSYCFRWAQFVGDADLKFAAPGPGRMIDYLRGH 180 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----P 194 ++ +V+ TGGDPLI+S L + + L ++HV +R ++ + P R+ Sbjct: 181 REVTDVLLTGGDPLIMSTPVLARWVTPLLAPDLEHVTNIRIGTKALVQWPYRVTSGPDAD 240 Query: 195 ELIQCLK---EAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250 EL++ ++ AGK V I +H +HP E EA AA++RL +AG ++ +Q+ +++ +ND Sbjct: 241 ELLRLIEACTAAGKSVAIMLHVSHPRELENEAATAAVARLRSAGAVVRAQAPIIRHVNDS 300 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 P+ A + R V L I+PYY +S F + + I + +SGL + Sbjct: 301 PQAWATMWRHMVRLGIQPYYTFVERDTGASSFFEVPLARALTIYQEAQRVVSGLARTARG 360 Query: 311 LDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 + GK+ ID + G + + Sbjct: 361 PVMSATPGKIAIDGETVVN-GERLFVLR 387 >gi|291301955|ref|YP_003513233.1| hypothetical protein Snas_4495 [Stackebrandtia nassauensis DSM 44728] gi|290571175|gb|ADD44140.1| conserved hypothetical protein [Stackebrandtia nassauensis DSM 44728] Length = 432 Score = 310 bits (794), Expect = 3e-82, Method: Composition-based stats. Identities = 80/385 (20%), Positives = 158/385 (41%), Gaps = 54/385 (14%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + R T ++L + EQ + ++ + + LI+ P+DPI R Sbjct: 12 RFRAYTARHLEELLTRAGLSPEQRLRARAVATVLPFRTNDYVIDELIDWDAAPDDPIYRL 71 Query: 60 FIPQKEEL--------------------------------NILPEEREDP----IGDNNH 83 PQ++ L N P + D +G+ + Sbjct: 72 VFPQEDMLPAEDVSKLAKLLDADPKGPELKAEVFAIRRRLNPHPAGQLDLNKPKLGEAD- 130 Query: 84 SPLKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 + G+ H+YP+ +L C YC +CFR + ++S D +A + YI+ Sbjct: 131 --IPGMQHKYPETVLFFPQQGQTCHAYCTYCFRWAQFVGESDLKMASNDIDALVGYIKAH 188 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------N 193 +I V+ TGGD +I+ L++ ++ L ++ ++ +R ++ PQR Sbjct: 189 PEITSVLITGGDAMIMGAPVLRRYIEPLIQLEQLESIRMGTKALAYWPQRFVTDPDADDT 248 Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPE 252 L + + E+GK + H +H E + A+ R+ + G ++ +Q+ L+K INDDP+ Sbjct: 249 LRLFEEVCESGKNLAFQAHFSHTRELAPTMLHDAVKRIRDTGAVIRTQAPLIKSINDDPQ 308 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 + +++ R + + PYY+ +F + + I ++SGLC+ Sbjct: 309 VWSDMWRKHHTMGMVPYYMFVERDTGPQEYFAVPLARAYDIFQEAYSQVSGLCRTVRGPS 368 Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCI 337 + GKV +D + ++ + Sbjct: 369 MSADPGKVAVD--GVVEINGTRVFV 391 >gi|325279772|ref|YP_004252314.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712] gi|324311581|gb|ADY32134.1| L-lysine 2,3-aminomutase [Odoribacter splanchnicus DSM 20712] Length = 442 Score = 309 bits (793), Expect = 4e-82, Method: Composition-based stats. Identities = 89/388 (22%), Positives = 154/388 (39%), Gaps = 48/388 (12%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHNPN-DPIARQF 60 + LT+ +++ + KE++ I+ + + LI+ + DPI Sbjct: 5 YQAYGLTNYRNIRQITRLNKEELQAIEVVGRVLPFKTNNYVVEELIDWERIDTDPIFTLN 64 Query: 61 IPQKE--------------------------------ELNILPEEREDPIGDNNHSPLKG 88 P++E ELN P ++ + LKG Sbjct: 65 FPRREMLSKKHFSVVSKLLAQEVGKEEFIAAVNAVRLELNPNPAGQDHNVPMLGDIRLKG 124 Query: 89 IVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 I H+Y + +L C YC FCFR + K+T+ L Y++ Q+ + Sbjct: 125 IQHKYRETVLFFPAQGQTCHAYCSFCFRWPQFSGMNELKFAMKETDLLLKYLRLHPQVTD 184 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------L 196 V+FTGGDP+ +S L ++ L ++H++ +R S+ P R + L Sbjct: 185 VLFTGGDPMTMSASLLSAYIEPLLQPGLEHIRTIRIGSKALAYWPYRFISDVDAAEVLRL 244 Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + + GK + H NHP E + AI R+ N G + +QS LL+ IND PEI Sbjct: 245 FEKVTATGKNLSFQAHFNHPVELSTAAVCEAIRRIRNTGAQIRTQSPLLRHINDSPEIWR 304 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 + R V+L PYY+ +F + +E+ I ++SG+C+ + Sbjct: 305 EMWRKQVDLSCIPYYMFVARDTGAKHYFEIPLEKCWDIFRKAYSQVSGICRTVRGPSMSD 364 Query: 316 GYGKVKIDTHNIKKVGNGSYCITDHHNI 343 GK+++ K G + + Sbjct: 365 EPGKIQLLGVAEIK-GEKVFVLRFIQGR 391 >gi|194333979|ref|YP_002015839.1| radical SAM domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311797|gb|ACF46192.1| radical SAM domain protein [Prosthecochloris aestuarii DSM 271] Length = 433 Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats. Identities = 89/382 (23%), Positives = 165/382 (43%), Gaps = 48/382 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59 + R T + +L + EQI IK ++ Y + +A NLI+ P+DP+ R Sbjct: 3 KYRSYTAANIHELPQYRALSDEQIHTIKTVATVYPFRINNHVAENLIDWSAVPDDPVFRL 62 Query: 60 FIPQK-----EELNILPE---------------------EREDPIGDNNHS-------PL 86 PQ +E N L + +P G + L Sbjct: 63 SFPQAGMLQDKEFNDLSGLIRSGKDKTIIQRTARQIMLRQNPNPAGQMELNTPQLDGIAL 122 Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + +L VC YC +CFR ++ D ++Y++E ++ Sbjct: 123 HGMQHKYRESVLFFPSEAQVCHAYCTYCFRWPQFSGLDNLKFANHDVSRLISYLKEHPEV 182 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196 ++IFTGGDP+++S + L+K ++ L I ++ +R ++ P R + L Sbjct: 183 KDIIFTGGDPMVMSSQLLRKYIEPLLKIPAIRTIRIGTKSLSWWPYRFTTDTDADDILRL 242 Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + + AGK + I H +HP E + A+ AI+R+ + G ++ SQS +++ IND+ + Sbjct: 243 FEKIVHAGKHLAIMAHISHPGEIENPAALDAITRIRSTGAVIRSQSPIVRYINDNAQTWE 302 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 + + + L I PYY+ +F + + E I + K+SGL + + Sbjct: 303 AMWQKQLHLGIIPYYMFLERDTGPKHYFDVPLHEALNIFNTAYRKMSGLGRTVRGPSMSC 362 Query: 316 GYGKVKIDTHNIKKVGNGSYCI 337 GK+ + +I ++ + Sbjct: 363 SPGKIIV--EDITEIDEKKVFV 382 >gi|171316099|ref|ZP_02905324.1| radical SAM domain protein [Burkholderia ambifaria MEX-5] gi|171098703|gb|EDT43497.1| radical SAM domain protein [Burkholderia ambifaria MEX-5] Length = 465 Score = 308 bits (791), Expect = 6e-82, Method: Composition-based stats. Identities = 87/371 (23%), Positives = 152/371 (40%), Gaps = 48/371 (12%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58 + + T + L+ E + + +S + P + N LI+ P+DPI R Sbjct: 7 WKFKPYTRHTVSQSPRWQLLPSELQEAVDVVSRVLPFRVNPYVLNELIDWDKVPDDPIYR 66 Query: 59 QFIPQKEELNILPE--------ERED------------------PIGDNNHS-------P 85 P ++ L E D P G H+ P Sbjct: 67 LTFPHRDMLKDHEYAAIRDLVRECADEARIEAVVRQIRLRMNPHPAGQLTHNVPYLDGVP 126 Query: 86 LKGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G+ H+Y + +L C YC FCFR ++ ++ AY++ + Sbjct: 127 LSGLQHKYRETVLFFPSAGQSCHAYCTFCFRWPQFVGMDELKFDARSSQELTAYLRRHPE 186 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPEL 196 + +++ TGGDPL++S + L + L+ L H+Q +R ++ PQR + +L Sbjct: 187 VTDILVTGGDPLVMSARALGEYLEPLLAPEFDHLQNIRIGTKSVAYWPQRFVSDKDSDDL 246 Query: 197 IQCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 ++ ++ +G+ + I H NHP E A A+ R+ G + Q+ L++ IN+DP Sbjct: 247 LRVFEKVVASGRNLAIMGHYNHPRELQHPIAQRALRRIIGTGASVRIQAPLIRHINEDPA 306 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 A L T V L PYY+ + +F+L + +I + +SGL + Sbjct: 307 AWAELWTTGVRLGAIPYYMFVERDTGPSDYFKLPLARAYEIFQAAYRSVSGLARTVRGPS 366 Query: 313 LPGGYGKVKID 323 + GKV +D Sbjct: 367 MSAFPGKVMVD 377 >gi|332827425|gb|EGK00177.1| hypothetical protein HMPREF9455_03509 [Dysgonomonas gadei ATCC BAA-286] Length = 444 Score = 308 bits (789), Expect = 9e-82, Method: Composition-based stats. Identities = 97/389 (24%), Positives = 162/389 (41%), Gaps = 48/389 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 QL+ TL + Q + I KE + +I+ + + + LI+ N DPI Sbjct: 7 QLKTYTLHNYQSIPQMAGIPKEFVRDIEIVGRVLPFKTNNYVIDELIDWDNIETDPIFTL 66 Query: 60 FIPQKEELN--------------------------ILPEEREDPIGDNNHSP------LK 87 P++ L+ I +P G ++ P LK Sbjct: 67 NFPRRGMLDKKHYAIVEKLLDGNAEKSFIDAKIQEIRLSLNPNPAGQEHNVPSLGEIKLK 126 Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 GI H+YP+ +L C YC FCFR G + K+ + L Y++ ++ Sbjct: 127 GIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFAMKEADLLLKYLRVHKEVT 186 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195 +V+FTGGDP++++ L + L H++ +R ++ P R + Sbjct: 187 DVLFTGGDPMVMNAAILSSYINPLLTSDFDHIRSIRIGTKSLAYWPYRYLTDTDSDDIIR 246 Query: 196 LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 L + + ++GK + I H NHP E +E AI R+ + G + +QS LLK IND PEI Sbjct: 247 LFEEINKSGKNLSIQAHFNHPRELSTEAVKQAIMRIRSTGAQIRTQSPLLKHINDKPEIW 306 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 A + R V+L PYY+ +F L +E+ I +++SGLC+ + Sbjct: 307 AQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNIFRRAYQQVSGLCRTVRGPSMS 366 Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 GK+++ K G + + Sbjct: 367 DHAGKIQVLGVQEIK-GEKIFILRFIQGR 394 >gi|332885734|gb|EGK05980.1| hypothetical protein HMPREF9456_02244 [Dysgonomonas mossii DSM 22836] Length = 444 Score = 307 bits (788), Expect = 1e-81, Method: Composition-based stats. Identities = 103/407 (25%), Positives = 170/407 (41%), Gaps = 57/407 (14%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQ 59 QL+ TL + Q + I KE + I+ + + + LI+ N + DPI Sbjct: 7 QLKTYTLHNYQSIPQIANIPKEFVKHIEVVGRVLPFKTNNYVIDELIDWDNIDTDPIFTL 66 Query: 60 FIPQKEELN--------------------------ILPEEREDPIGDNNHSP------LK 87 P+K L+ I +P G ++ P LK Sbjct: 67 NFPRKGMLDKKHYAIVEQLLDDNVEKSIIEDKIHKIRLSLNPNPAGQEHNVPSLGEVKLK 126 Query: 88 GIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 GI H+YP+ +L C YC FCFR + K+ + L Y++ ++ Sbjct: 127 GIQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSELKFAMKEVDLLLKYLRVHKEVT 186 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE-------- 195 +V+FTGGDP++++ L +K L H++ +R ++ P R + Sbjct: 187 DVLFTGGDPMVMNAAILSSYIKPLLTSDFDHIRSIRIGTKSLAYWPYRYLTDSDSDDIIR 246 Query: 196 LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 L + + ++GK + I H NHP E ++ AI R+ N G + +QS LLK IND PEI Sbjct: 247 LFEEINKSGKNLSIQAHFNHPRELSTDAVKQAILRIKNTGAQIRTQSPLLKHINDKPEIW 306 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 A + R V+L PYY+ +F L +E+ I +++SGLC+ + Sbjct: 307 AQMWRKQVDLGCIPYYMFIARDTGSKQYFELPLEKCWNIFRRAYQQVSGLCRTVRGPSMS 366 Query: 315 GGYGKVKIDTHNIKKVGNGSYCITDHHNI----VH-----DYPPKSS 352 GK+++ K G + + VH +Y PK++ Sbjct: 367 DHAGKIQVLGVQEIK-GEKLFVLRFIQGRNPKWVHIPFFAEYDPKAT 412 >gi|302326000|gb|ADL25201.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 332 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 99/326 (30%), Positives = 160/326 (49%), Gaps = 18/326 (5%) Query: 6 KTLTSAQDLYNANL-----IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP--IAR 58 KT T + + + E + + ++ + A+LI N +P + R Sbjct: 16 KTFTHISEFLDYLGNDFTGLTSEMRANLDQ-EPTFAFNCSKHYADLIK--NSAEPVKLLR 72 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 + +P +EL P +DP+GD + I+ +Y +R L+ C V CRFCFRR Sbjct: 73 EVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVSTSACGVRCRFCFRRNYP 132 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + S ++ + IWEVI +GGDPL L + +++ + + V L Sbjct: 133 FQDTQNIAS-----EVSNWLDVHTSIWEVILSGGDPLTLGPGPFRDLVEAIAFHPSVTTL 187 Query: 179 RFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 R H+R+PI+ P + + + L+E A + +H NHP E EE+ A ++L +G Sbjct: 188 RIHTRLPIMRPDLVM-QHFELLRELPARFNCVLVVHVNHPDELDEESAAVFAQLKFSGWT 246 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 LL+QSVLLKG+NDD E L L R E + PYYLH D A G +HF ++ E ++++A Sbjct: 247 LLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKGVAHFEVSDERARELIAQ 306 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322 ++ K+ G P + ++ G K I Sbjct: 307 IRTKLPGYLVPKLVREIAGEKSKTPI 332 >gi|124004604|ref|ZP_01689449.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina ATCC 23134] gi|123990176|gb|EAY29690.1| lysine 2,3-aminomutase related protein enzyme [Microscilla marina ATCC 23134] Length = 448 Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats. Identities = 88/370 (23%), Positives = 157/370 (42%), Gaps = 49/370 (13%) Query: 2 QLRHKTLTSAQDLYNAN-LIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58 + ++ TL + +++ + +++ I+ + N + LI+ N NDPI Sbjct: 3 KYQNYTLKNFRNIPYVESKLSEDEKFAIEVVGNVLPFKANNYVVEELIDWDNYANDPIFI 62 Query: 59 QFIPQKEEL--------------------------------NILP-EEREDPIGDNNHSP 85 PQK+ L N P + +D + + + Sbjct: 63 LTFPQKDMLKPEHFAHVAHLLKSGVSRADLKTEVNKIRLQLNPHPAGQMKDNVPEVDGVK 122 Query: 86 LKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G+ H+Y + +L C YC FCFR + ++TE + YI+ Sbjct: 123 LTGVQHKYRETMLFFPSQGQTCHAYCTFCFRWPQFVGMNELKFAMRETELLVKYIKVNPH 182 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------ 195 I +++FTGGDPLI+ K L + L + +++ +R ++ PQR + Sbjct: 183 ITDILFTGGDPLIMKTKILASYVDALLEADLPNLKTIRIGTKALGYWPQRFTSDTDADDL 242 Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 L + + +AGK + H NH E +EE AI R+ N G + +QS ++K IND E Sbjct: 243 LRLFERVNKAGKHLAFMSHFNHGRELETEEVQKAIGRILNTGTAIRTQSPIMKNINDSAE 302 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 A + R V+L PYY+ +F + ++ +I +++SG+C+ Sbjct: 303 AWAYMWRKQVDLGCVPYYMFLARDTGAQDYFAIELDRAWQIFQQSYQQVSGVCRTVRGPS 362 Query: 313 LPGGYGKVKI 322 + G GKV++ Sbjct: 363 MSAGPGKVQV 372 >gi|237654137|ref|YP_002890451.1| hypothetical protein Tmz1t_3480 [Thauera sp. MZ1T] gi|237625384|gb|ACR02074.1| conserved hypothetical protein [Thauera sp. MZ1T] Length = 484 Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats. Identities = 89/392 (22%), Positives = 159/392 (40%), Gaps = 50/392 (12%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58 M + T + + EQ E+K ++ + + + LI+ + P DPI + Sbjct: 46 MSFKVFTARDLDRIPQLARLSPEQRFEMKVVAAVLPFRVNQYVIDELIDWADVPRDPIFQ 105 Query: 59 QFIPQKEELNILPEER----------EDPIG------------------------DNNHS 84 PQ+ L ER +D + D + Sbjct: 106 LTFPQRGMLASEHYERIARLIEGDADKDALEAAIAEVRHALNPHPADQMQMNMPLDEHGK 165 Query: 85 PLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 + G+ H+Y + +L C YC FCFR K ++S + Y++ + Sbjct: 166 RIDGLQHKYRETVLFFPSQGQTCHAYCSFCFRWAQFVGDKELRIASSEARVLHDYLRTHT 225 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PE 195 ++ +++ TGGDP+++ + L++ L+ L H+Q +R S+ P R + Sbjct: 226 EVTDLLVTGGDPMVMKTRHLREYLEPLLRPEFDHIQTIRIGSKALTFWPHRFLGAEDADD 285 Query: 196 LIQCLK---EAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 L++ L+ EAGK V + H NH E ++ A AAI R+ G ++ +Q L+ INDDP Sbjct: 286 LMRLLRQLVEAGKHVALMAHYNHWKELETDAAHAAIRRIRATGAVIRAQGPLIAHINDDP 345 Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 A L +T V L + PYY+ +F + + +I +++SGL + Sbjct: 346 AAWARLWKTEVRLGLVPYYMFVERDTGARHYFEVPLARAWEIYQQAIQQVSGLARTARGP 405 Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 + GKV+I + G + + Sbjct: 406 SMSASPGKVEIQGV-TEIAGEKVFVLRFIQGR 436 >gi|262199318|ref|YP_003270527.1| radical SAM domain-containing protein [Haliangium ochraceum DSM 14365] gi|262082665|gb|ACY18634.1| radical SAM domain-containing protein [Haliangium ochraceum DSM 14365] Length = 458 Score = 305 bits (783), Expect = 5e-81, Method: Composition-based stats. Identities = 79/370 (21%), Positives = 160/370 (43%), Gaps = 50/370 (13%) Query: 4 RHKTLTS--AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + + +TS L + + + E ++K +++ + + + N LI+ P+DP+ + Sbjct: 15 KFRVITSKHLGQLDHLSFLSTETRQQLKAVASVFPFRVNEYVVNHLIDWSKVPDDPMFQL 74 Query: 60 FIPQKEELNILP-EERED-------------------------PIGDNNHSP-------L 86 PQ L D P G + + Sbjct: 75 TFPQPGMLTDDDMAHMLDLIRRDEPEETITRAAQRIQMRLNPHPAGQMALNVPRVNGKVV 134 Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 +G+ H+Y + +L C YC +CFR S ++++ E LAY++E I Sbjct: 135 RGVQHKYRETVLFFPSQGQTCHSYCTYCFRWAQFISNDELKFAAQEVEPLLAYLKEHPGI 194 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP-----ELI 197 +V+FTGGDP+++ L++ ++ L + HV +R ++ P+ P R EL+ Sbjct: 195 SDVLFTGGDPMVMKTPVLRRYIEPLLAADLPHVSTIRIGTKAPVYWPYRFTDGNDADELL 254 Query: 198 QCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 + +E GK + + +H +H E + E A++R+ G ++ Q+ L++ +ND PE+ Sbjct: 255 RLFEEIVARGKHLAVLVHFSHYREVEAPEVQTALARIRATGAVIRCQAPLIRHVNDTPEV 314 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 + + V+ PYY+ +F++ + I + ++++SGL + + Sbjct: 315 WTRMWHSQVKQGAIPYYMFVERDTGPNEYFKVPLHRALDIFQAARKQLSGLSRTVRGPVM 374 Query: 314 PGGYGKVKID 323 GKV ++ Sbjct: 375 SCTPGKVLVN 384 >gi|261416917|ref|YP_003250600.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373373|gb|ACX76118.1| lysine 2,3-aminomutase YodO family protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 322 Score = 305 bits (782), Expect = 6e-81, Method: Composition-based stats. Identities = 99/326 (30%), Positives = 160/326 (49%), Gaps = 18/326 (5%) Query: 6 KTLTSAQDLYNANL-----IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDP--IAR 58 KT T + + + E + + ++ + A+LI N +P + R Sbjct: 6 KTFTHISEFLDYLGNDFTGLTSEMRANLDQ-EPTFAFNCSKHYADLIK--NSAEPVKLLR 62 Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 + +P +EL P +DP+GD + I+ +Y +R L+ C V CRFCFRR Sbjct: 63 EVLPSTDELKDAPGFVDDPVGDLPAGKSECILQKYENRALIVSTSACGVRCRFCFRRNYP 122 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + S ++ + IWEVI +GGDPL L + +++ + + V L Sbjct: 123 FQDTQNIAS-----EVSNWLDVHTSIWEVILSGGDPLTLGPGPFRDLVEAIAFHPSVTTL 177 Query: 179 RFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 R H+R+PI+ P + + + L+E A + +H NHP E EE+ A ++L +G Sbjct: 178 RIHTRLPIMRPDLVM-QHFELLRELPARFNCVLVVHVNHPDELDEESAAVFAQLKFSGWT 236 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 LL+QSVLLKG+NDD E L L R E + PYYLH D A G +HF ++ E ++++A Sbjct: 237 LLNQSVLLKGVNDDAETLERLSRRLFEQGVLPYYLHQLDHAKGVAHFEVSDERARELIAQ 296 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322 ++ K+ G P + ++ G K I Sbjct: 297 IRTKLPGYLVPKLVREIAGEKSKTPI 322 >gi|149911234|ref|ZP_01899857.1| hypothetical 38.7 kDa protein [Moritella sp. PE36] gi|149805688|gb|EDM65687.1| hypothetical 38.7 kDa protein [Moritella sp. PE36] Length = 310 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 99/297 (33%), Positives = 157/297 (52%), Gaps = 12/297 (4%) Query: 19 LIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78 KKE+I+ + N+ + +PNDPI Q IP+ EEL+ + DP+ Sbjct: 11 FTKKEEIEN-----KEFPFRSPLEFLNIADFDDPNDPILLQIIPKLEELDTVKGFNLDPV 65 Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 D+ H + G++H+Y DR+LL CP++CR+CFR+ S + + EA L+YI Sbjct: 66 NDSQHEKITGLIHKYHDRVLLLFSKHCPIHCRYCFRKGYNYSDN----NKQQIEAWLSYI 121 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 + I EVI +GGDPL ++ L + + IKH+ R HSR+P+V P ++ L Sbjct: 122 ESNHDIEEVILSGGDPLFVNSATLLDFVTRVSAIKHITRFRIHSRMPVVSPSLLDKNLAN 181 Query: 199 CLKEAGKP---VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 ++ A K + + IH+NH E ++E + ++S G I+L+ SVLLKGIND+ L Sbjct: 182 RIRRAAKKDIDMILVIHSNHEKELTDEVVKSVSSFQAEGFIILNHSVLLKGINDNALTLK 241 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 +L R + + + PYYL+ D G++HF + I L++ SG P + D Sbjct: 242 SLSRKLIRMGVIPYYLNLLDKIEGSAHFFVEKNISLSIYQELQKISSGYLVPKLVQD 298 >gi|328949906|ref|YP_004367241.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884] gi|328450230|gb|AEB11131.1| L-lysine 2,3-aminomutase [Marinithermus hydrothermalis DSM 14884] Length = 441 Score = 303 bits (777), Expect = 2e-80, Method: Composition-based stats. Identities = 89/367 (24%), Positives = 157/367 (42%), Gaps = 48/367 (13%) Query: 4 RHKTLTS--AQDLYNANLIKKEQIDEIKEISNHYSIALTPV-IANLINPHN-PNDPIARQ 59 R++ +T+ + E + + +S + LI+ P DPI + Sbjct: 12 RYRAITNQNIHKYSEWERLDPELKEAVMVVSQVLPFRTNEYVMRELIDWSRVPEDPIFQL 71 Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHS-------PL 86 PQ+E L+ ER P G H+ L Sbjct: 72 TFPQREMLDPEDYERIRTLLNNGASREELLAAANEIRFRLNPHPAGQLTHNVPTLNGRKL 131 Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + +L C YC +CFR + +++T+ +AY+Q ++ Sbjct: 132 PGLQHKYHETVLFFPGQGQTCHAYCTYCFRWAQFIGLQDIKFEARETDDLVAYLQAHPEV 191 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196 +V+ TGGDP+I+ K L+K L+ L I ++ +R ++ PQR + Sbjct: 192 TDVLVTGGDPMIMRTKILRKYLEPLLEIPTLRTIRIGTKSLAYWPQRYVTDADADDALRF 251 Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + + AGK + I H++HP E + A AI R+ G ++ +Q+ L+K +NDDP++ A Sbjct: 252 FEEIVAAGKHLAIMAHSSHPVELATPIAQEAIRRVRETGAVIRTQAPLIKHVNDDPDVWA 311 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 R V+L + PYY+ +F + + Q+I A+ ++SGL + + Sbjct: 312 EKWRQEVKLGMIPYYMFVERDTGPKRYFEVPLARAQEIFAAAWRQVSGLARTVRGPSMSA 371 Query: 316 GYGKVKI 322 GKV+I Sbjct: 372 FPGKVRI 378 >gi|332829850|gb|EGK02492.1| hypothetical protein HMPREF9455_01449 [Dysgonomonas gadei ATCC BAA-286] Length = 441 Score = 303 bits (776), Expect = 3e-80, Method: Composition-based stats. Identities = 89/388 (22%), Positives = 161/388 (41%), Gaps = 48/388 (12%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQF 60 L+ TL + + + +E + +I+ + + + LI+ N + DPI Sbjct: 5 LKSYTLHNFLSIPQIASLSEEMVRDIEVVGRVLPFKTNNYVVDELIDWDNLDTDPIFTLN 64 Query: 61 IPQKEELN--------------------------ILPEEREDPIGDNNHSP------LKG 88 P++ L I +P G ++ P LKG Sbjct: 65 FPRRGMLEKKHYAAVERLLNEHFDGKELNEKIQQIRLSLNPNPAGQEHNVPYLGEIKLKG 124 Query: 89 IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 I H+YP+ +L C YC FCFR G + K+ + Y++ ++ + Sbjct: 125 IQHKYPETVLFFPSQGQTCHAYCTFCFRWPQFSGMSGLKFAMKEADLLFKYLRLHKEVTD 184 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------L 196 ++FTGGDP+I++ L+ ++ L H++ +R ++ P R + L Sbjct: 185 ILFTGGDPMIMNASTLEAYIRPLLEPEFDHIRTIRIGTKSLAYWPYRYLTDKDSDDIIRL 244 Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + + +GK + + H NHP E +E AI+R+ + G + +QS LL+ IND PE+ A Sbjct: 245 FELVNRSGKSLSLQAHFNHPRELSTEAVKQAIARIRSTGSQIRTQSPLLRNINDKPELWA 304 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 + R V+L PYY+ +F L +E+ +I ++SGLC+ + Sbjct: 305 RMWRKQVDLGCIPYYMFIARDTGSKHYFELPLEKCWQIFRRAYRQVSGLCRTVRGPSMSD 364 Query: 316 GYGKVKIDTHNIKKVGNGSYCITDHHNI 343 GK+++ K G + + Sbjct: 365 HAGKIQVLGVQEIK-GEKIFVLRFIQGR 391 >gi|300087493|ref|YP_003758015.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527226|gb|ADJ25694.1| L-lysine 2,3-aminomutase [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 440 Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats. Identities = 85/390 (21%), Positives = 162/390 (41%), Gaps = 48/390 (12%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPH-NPNDPIAR 58 MQ + TL + +++ + ++I +I+ + + NLI+ DP+ Sbjct: 1 MQYKPFTLNNFREIPQVEALSLQKIRDIEVVGTVLPFRTNNYVVDNLIDWECAETDPLFI 60 Query: 59 QFIPQKEELNILPEERED--------------------------PIGDNNHSP------- 85 PQK L+ R D P G + Sbjct: 61 ATFPQKGMLSPEDYHRVDTLLREGAGQEVILRTVTEIRQKMNPHPAGQLELNVPVLNGES 120 Query: 86 LKGIVHRYPDRILLKLLH--VCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKS 142 L GI H+Y + +L C YC FCFR V + ++S++ + + Y++ + Sbjct: 121 LPGIQHKYRETVLFFPSQGQTCHAYCTFCFRWPQFVKGMEDLKIASREIDTLVEYLKSRP 180 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPE------ 195 ++ +V+ TGGDPL++ L + ++ L + ++ +R +R P R + + Sbjct: 181 EVTDVLVTGGDPLVMKAGLLARYIEPLLVLPGIRTIRIGTRSLSFWPYRYVTDDDAEELL 240 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDDPEI 253 L + ++EAGK + H NHP E E + A+ R+ G ++ +QS LL+ IND + Sbjct: 241 TLFRRVREAGKHLAFMAHFNHPVELLPEIVPEAVRRIRETGAVIRTQSPLLRHINDSEAL 300 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A + R V++ PYY+ +F +T+++ ++ + ISG+C+ + Sbjct: 301 WAQMWRRQVDMGCVPYYMFMARDTGAQRYFSVTLQDAWRVYQGAFQAISGICRTAEGPVM 360 Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 GKV++ G+ + + Sbjct: 361 SALPGKVQVMGTATIG-GDKVFVLRLVQGR 389 >gi|226946213|ref|YP_002801286.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ] gi|226721140|gb|ACO80311.1| Lysine 2,3-aminomutase [Azotobacter vinelandii DJ] Length = 433 Score = 302 bits (775), Expect = 4e-80, Method: Composition-based stats. Identities = 81/370 (21%), Positives = 158/370 (42%), Gaps = 48/370 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + + +L + + KE+ ++ + + + I + LI+ N P+DPI R Sbjct: 9 KFQPYSLRNIHHAPQWQKLSKEEKHSLEVLGAVFPFKVNQYILDELIDWGNIPDDPIFRL 68 Query: 60 FIPQKEELNILPEE--------------------------REDPIGDNNHS-------PL 86 P K+ L + +P G H+ P+ Sbjct: 69 TFPHKDMLRESEFQELSNAILNQFNEAEIQSISNKIRFRMNPNPAGQMTHNVPRMNGVPI 128 Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + +L C YC FCFR ++ +E + Y++E ++ Sbjct: 129 NGLQHKYKETVLFFPSAGQTCHSYCTFCFRWPQFVGMSSLRFEARSSEPLVQYLKEHKEV 188 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE------- 195 +V+ TGGDPL+++ + L + ++ L ++H++ +R ++ PQR + Sbjct: 189 TDVLITGGDPLVMNTRILYEFIRPLLIPELEHIKNIRIGTKSISYWPQRFVTDKDADDLL 248 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L + + GK + + H NHP E ++ A A+ R+ G+ + QS ++K IND+P+ Sbjct: 249 HLFEDIIATGKNLALMAHYNHPCEIKTKIAQIAVKRIVGTGVTVRMQSPIIKHINDNPQA 308 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 +L T V+L PYY+ +++F + + +I + +SGL + + Sbjct: 309 WVDLWTTGVQLGAIPYYMFVERDTGPSNYFEIPLVSAWEIFQKAYQSVSGLARTVRGPSM 368 Query: 314 PGGYGKVKID 323 GK+ +D Sbjct: 369 STFPGKIMVD 378 >gi|238027720|ref|YP_002911951.1| hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1] gi|237876914|gb|ACR29247.1| Hypothetical protein bglu_1g21410 [Burkholderia glumae BGR1] Length = 454 Score = 301 bits (772), Expect = 9e-80, Method: Composition-based stats. Identities = 81/385 (21%), Positives = 148/385 (38%), Gaps = 48/385 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQ 59 + + S + + I E + + IS + + LI+ P+DP+ R Sbjct: 5 KFKAYNAKSIANSPYWSRIPNEIKEALGTISRVLPFRINEYVLRELIDWERVPDDPVFRL 64 Query: 60 FIPQKEE--------------------------------LNILP-EEREDPIGDNNHSPL 86 P +N P + + + PL Sbjct: 65 TFPHPGMLPADDYRRLRELLAQGADPAAGARYIDALRHRMNPHPAGQMTHNVPMLDGRPL 124 Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + +L C YC FCFR + ++++++ Y++ ++ Sbjct: 125 PGLQHKYAETVLFFPAAGQTCHAYCSFCFRWPQFIGAEDMKFNARESDELSRYLRLHPEV 184 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196 +V+ TGGDP++++ + L ++ L I H+Q +R ++ PQR + L Sbjct: 185 TDVLITGGDPMVMNAESLAGYIEPLLAIPHLQNIRIGTKSVAYWPQRFVTDKDADAVLRL 244 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + + GK + + H NHP E E A A+ R+ G + QS +++ IND E Sbjct: 245 FERVVAHGKNLSVMAHYNHPAELRPEIARRAVKRIIGTGATVRMQSPIVRHINDSAETWQ 304 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 L T V L PYY+ +F L + + I + +++SGL + + Sbjct: 305 ELWTTGVRLGAIPYYMFVERDTGPQRYFELPLVDAYHIFRNAYQRVSGLSRTVRGPSMST 364 Query: 316 GYGKVKIDTHNIKKVGNGSYCITDH 340 YGKV +D + +G Sbjct: 365 LYGKVLVD--GVVTLGGEKVFALQF 387 >gi|161529280|ref|YP_001583106.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus SCM1] gi|160340581|gb|ABX13668.1| lysine 2,3-aminomutase related protein [Nitrosopumilus maritimus SCM1] Length = 448 Score = 301 bits (772), Expect = 1e-79, Method: Composition-based stats. Identities = 84/369 (22%), Positives = 149/369 (40%), Gaps = 49/369 (13%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60 L+ TL++ +DL I +E+ E++ + N + LIN ++ PNDP+ Sbjct: 14 LKSYTLSNFRDLPQIQNISEEKQFEMEVVGNVLPFKANNYVVEQLINWNDIPNDPMYVLT 73 Query: 61 IPQKEEL--------------------------NILPEEREDPIGD--------NNHSPL 86 PQ+ L I + P G + + L Sbjct: 74 FPQRGMLKPEHYAKMENTLKNTSDKKEIANVANEIRLQLNPHPAGQMELNVPTLKDGTKL 133 Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + L C YC FCFR + ++ E + Y+ E +I Sbjct: 134 YGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMQEGEQLVQYVSEHPEI 193 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195 +V+FTGGDP+I+ K K + L + +++ +R ++ P + + Sbjct: 194 SDVLFTGGDPMIMKAKMFSKYVDALIEAKLPNLKTIRIGTKALSYWPYKFLTDSDSQEML 253 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 + Q + ++G + H NH E + +AI + G + +QS LL INDD E+ Sbjct: 254 QVFQKITDSGLHLAFMAHFNHLNELSTNAVKSAIKEVRKTGAQIRTQSPLLAHINDDAEM 313 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 AN+ V+L PYY+ +F + + + +I + +SGL + + Sbjct: 314 WANMWTKQVQLGCIPYYMFVVRDTGAQHYFGVPLVKAYEIFSQAYSTVSGLGRTVRGPSM 373 Query: 314 PGGYGKVKI 322 GKV++ Sbjct: 374 SATPGKVQV 382 >gi|113477791|ref|YP_723852.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101] gi|110168839|gb|ABG53379.1| L-lysine 2,3-aminomutase [Trichodesmium erythraeum IMS101] Length = 445 Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats. Identities = 82/370 (22%), Positives = 148/370 (40%), Gaps = 48/370 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 ++R + + + ++ IK ++ I LI+ +N PNDP+ R Sbjct: 9 KIRFYGAKNLDSIPQLSNFSEQDRLGIKAVAQVLPFLTNNYILEQLIDWNNVPNDPMFRL 68 Query: 60 FIPQKEELNILPEE--------------------------REDPIGDNNHS-------PL 86 P E L P G H+ P+ Sbjct: 69 TFPHPEMLESKDYNHIIQLLTENAPKTVLKQAANKIRQQLNPHPSGQKQHNVPTFNSEPV 128 Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 GI H+Y + +L+ C YC FCFR +G +++++ Y+Q+ ++ Sbjct: 129 PGIQHKYRETVLVFPTAGQTCHAYCTFCFRWPQFVGLEGLKFATRESGMFQQYLQQHQEV 188 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQR-INPE------ 195 +V+FTGGDP+ + ++L + L H+Q +R ++ P R + E Sbjct: 189 RDVLFTGGDPMTMKARQLSLYIDPLLEAKFDHIQTIRIGTKSISFWPYRYVTDEDADNTL 248 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L + + + GK + I H H E + A AI R+ + G + +Q+ +++ IND E Sbjct: 249 RLFEKIVKRGKHLAIMAHYEHWQELDTPVATEAIRRIRSTGAQIRTQAPVVRHINDSAET 308 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A +++ V L PYY+ +F + + +I +++SGL + + Sbjct: 309 WAKMLQMQVSLGCIPYYMFVERQTGAKKYFEIPLVRVLEIYREAVKQVSGLARTIRGPLM 368 Query: 314 PGGYGKVKID 323 GKV ID Sbjct: 369 SALPGKVAID 378 >gi|332706173|ref|ZP_08426242.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L] gi|332355010|gb|EGJ34481.1| L-lysine 2,3-aminomutase [Lyngbya majuscula 3L] Length = 445 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 82/362 (22%), Positives = 146/362 (40%), Gaps = 48/362 (13%) Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL 67 ++L + + +K +S + + I LI+ +N P+DPI R P + L Sbjct: 16 DIENLPQLQKLPSHERLAMKAVSKVFPFRVNNYIVEQLIDWNNLPDDPIFRMTFPHPDML 75 Query: 68 NI--------------------------------LPEERED-PIGDNNHSPLKGIVHRYP 94 N P + D + + + GI H+YP Sbjct: 76 NPEDLNRVIKLLKTNGSKETIRRTVDDIRSRLNPHPGGQVDYNVPRLDGELISGIQHKYP 135 Query: 95 DRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 D +L+ C YC+FCFR +++++ Y+++ ++ +V+ TGG Sbjct: 136 DTVLIFPSSGQACHAYCQFCFRWAQFVDTNTHKFTTRESGRFQDYLRQHKEVTDVVLTGG 195 Query: 153 DPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------LIQCLKE 202 DP+I+S +RL + ++ L +H+Q +R ++ P R + L + + Sbjct: 196 DPMIMSARRLFQYIEPLLDPEFEHIQTIRIGTKSVAYWPYRYVTDRDADDVLRLFEKIVY 255 Query: 203 AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 +GK + + H H E + A AI R+ + G L +QS LLK +ND + + Sbjct: 256 SGKHLAVMGHYTHWRELDTPIAQEAIRRIRSTGAQLRAQSPLLKHVNDSARAWRKMWQMQ 315 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 V L PYY+ +F + + +I + +SGL Q + GKV Sbjct: 316 VRLGCIPYYMFVERDTGPKHYFGIPLVRTWEIFRHAIKGVSGLSQTVRGPVMSALPGKVL 375 Query: 322 ID 323 I Sbjct: 376 IS 377 >gi|269125115|ref|YP_003298485.1| hypothetical protein Tcur_0857 [Thermomonospora curvata DSM 43183] gi|268310073|gb|ACY96447.1| conserved hypothetical protein [Thermomonospora curvata DSM 43183] Length = 446 Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats. Identities = 74/368 (20%), Positives = 142/368 (38%), Gaps = 46/368 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + R T +L + +Q I+ ++ + LI+ P+DPI R Sbjct: 18 KFRAYTAKHLDELTARAGLSADQRLAIRAVATVLPFRTNSYVVEELIDWSAAPDDPIYRL 77 Query: 60 FIPQKEEL--------------------------------NILPEERED-PIGDNNHSPL 86 PQ++ L N P + + + + Sbjct: 78 VFPQEDMLPADDVAHIAGLLRRQAPRQEIEAAAHRVRMRLNPHPAGQLELNVPSFGDGVV 137 Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + +L C YC +CFR + L+ D Y+ ++ Sbjct: 138 PGMQHKYDETVLYFPKQGQTCHAYCTYCFRWAQFVGEPDLKLAGDDALQLRDYLVAHPRV 197 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196 V+FTGGD +I+ L++ ++ L ++ ++ +R ++ PQ+ + L Sbjct: 198 TNVLFTGGDAMIMGEPVLRRYVEPLLELEQIESIRIGTKSLAYWPQKFVTDPDADAMLRL 257 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + + AGK + H +HP E A+ R+ G ++ +Q+ L++ INDDP++ Sbjct: 258 FEQVVNAGKSLAFMAHFSHPRELEPAMVREAVRRIRGTGAVIRTQAPLIRSINDDPKVWE 317 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 + RT + + PYY+ +F + + +I +SGL + + Sbjct: 318 TMWRTQTRMGMVPYYMFVERDTGPRDYFAVPLGRAYEIFRDAYRHVSGLARTVRGPSMSA 377 Query: 316 GYGKVKID 323 GKV +D Sbjct: 378 TPGKVCVD 385 >gi|270264523|ref|ZP_06192789.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13] gi|270041659|gb|EFA14757.1| L-lysine 2,3-aminomutase [Serratia odorifera 4Rx13] Length = 449 Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats. Identities = 79/370 (21%), Positives = 154/370 (41%), Gaps = 48/370 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + + TL + E ++ +S+ + I + LI+ N P+DPI R Sbjct: 6 KFQPYTLRNINQAPQWQNFTSEMRHSVEVLSHVLPFRVNQYILDELIDWDNIPDDPIFRL 65 Query: 60 FIPQKEE--------------------------------LNILP-EEREDPIGDNNHSPL 86 P K+ +N P + + ++ PL Sbjct: 66 TFPHKDMLRSEEFSQLSDAITRQAGDAELQMLVNKIRMRMNPHPAGQLTHNVPILDNEPL 125 Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + +L C YC FCFR +++++ + Y++ +++ Sbjct: 126 SGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMDELKFEARNSQMLVEYLKRHTEV 185 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRIN-----PELI 197 +++ TGGDP+I++ + L ++ L + H++ +R ++ PQR +++ Sbjct: 186 TDILITGGDPMIMNARALGDYIRPLLVPELSHIKNIRIGTKSVSYWPQRYLTDKDADDVL 245 Query: 198 QCLKE---AGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEI 253 + +E +G+ + + H NHP+E E A+ R+ + G + QS L++ IND+P+ Sbjct: 246 RIFEEVVASGRNLALMAHYNHPHEIQPEVAQRALKRIISTGATVRMQSPLIRHINDNPKD 305 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A L T V L PYY+ +F + + +I + +SGL + + Sbjct: 306 WATLWTTGVRLGAIPYYMFVERDTGPNDYFGMPLIRAWEIFQEAYKSVSGLARTVRGPSM 365 Query: 314 PGGYGKVKID 323 GK+ ID Sbjct: 366 SAFPGKIMID 375 >gi|197294893|ref|YP_002153434.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315] gi|195944372|emb|CAR56973.1| radical SAM superfamily protein [Burkholderia cenocepacia J2315] Length = 466 Score = 299 bits (766), Expect = 5e-79, Method: Composition-based stats. Identities = 87/385 (22%), Positives = 152/385 (39%), Gaps = 49/385 (12%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60 + + DL + ++I ++ + + LI+ N P+DP+ R Sbjct: 28 FKAYNRSKLDDLPQLARLPPRMREQIGLVARVLPFKVNRYVVEQLIDWTNVPDDPLFRLT 87 Query: 61 IPQKEE--------------------------------LNILPEEREDPIGDNNHSPLKG 88 PQ + +N P ++ + + P G Sbjct: 88 FPQPDMLAPDDLGELAMLSRDAARGADLDALIGRLRVRMNPHPADQRLNEPELDGEPCPG 147 Query: 89 IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 I H+Y +L H C YC FCFR +S + AY++ ++ + Sbjct: 148 IQHKYAQTVLYFPSHGQTCHAYCTFCFRWPQFVGDASLKFASSEAARLHAYLRAHGEVTD 207 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPELIQC 199 ++ TGGDP+++S RL++ L L ++HV +R ++ P R PEL+ Sbjct: 208 LLMTGGDPMVMSATRLREYLMPLLAPGLEHVGNIRIGTKALTYWPYRFVSDPDTPELLAL 267 Query: 200 LK---EAGKPVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILA 255 L+ +AG+ V + H NH E S E A++ L G+++ SQ +L+ INDD E+ Sbjct: 268 LRTLIDAGRNVTVMAHLNHWRELSTEVAEQAVTNLRRIGVVIRSQGPVLRHINDDAEVWR 327 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 V L I PYY+ +F L + I + +SGL + + Sbjct: 328 RNWVGQVRLGIVPYYMFVERDTGPRGYFELPLARALDIYNTAIASVSGLARSARGPSMSA 387 Query: 316 GYGKVKIDTHNIKKVGNGSYCITDH 340 G GKV++ ++ Y + + Sbjct: 388 GPGKVEVA--GTLELQGQRYFLLNF 410 >gi|118577041|ref|YP_876784.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A] gi|118195562|gb|ABK78480.1| lysine 2,3-aminomutase [Cenarchaeum symbiosum A] Length = 456 Score = 298 bits (765), Expect = 6e-79, Method: Composition-based stats. Identities = 85/391 (21%), Positives = 155/391 (39%), Gaps = 52/391 (13%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60 L+ T+++ + L + +E E+ +++ + LI+ P+DP+ Sbjct: 18 LKSYTISNYKQLPQVQALSEEVRFEMDVVASVLPFKTNNYVVEQLIDWDRVPDDPMYVLT 77 Query: 61 IPQKEEL-------------NILPEERED-------------PIGD--------NNHSPL 86 PQK L N P+E D P G + + L Sbjct: 78 FPQKNMLKKRHFDQVAQMIKNETPKEEMDKKINDVRMELNPHPAGQLELNVPSLKDGTKL 137 Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + L C YC FCFR + ++ E YI E +I Sbjct: 138 YGMQHKYNETCLFFPSQSQTCHAYCTFCFRWPQFVGMDDMKFAMREGEQLAQYIGEHPEI 197 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI--------NP 194 +V+FTGGDP+I+ K + + TL + ++ +R +++ P ++ Sbjct: 198 SDVLFTGGDPMIMKAKMFRTYVDTLIDAKLPNLTTIRIGTKMLSYWPYKVLSDDDAAETL 257 Query: 195 ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 + + + ++G + I H NHP E ++ +AI ++ G + +QS LL INDD + Sbjct: 258 DTFRHISDSGLHLSIMGHFNHPVELSTDAVKSAIRKIRATGAQIRTQSPLLSHINDDADA 317 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 + V L PYY+ +F +++ +I S ++SGL + + Sbjct: 318 WVRMWTQQVRLGCIPYYMFIVRDTGAQHYFGMSLARAYEIFTSAYRRVSGLARTVKGPSM 377 Query: 314 PGGYGKVKIDTHNIKKVGNGS-YCITDHHNI 343 GKV I + I ++G + + Sbjct: 378 SATPGKVLI--NGIPEIGGKKLFSLRFLQGR 406 >gi|15639115|ref|NP_218561.1| hypothetical protein TP0121 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025355|ref|YP_001933127.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum SS14] gi|4033488|sp|O83158|Y121_TREPA RecName: Full=Uncharacterized KamA family protein TP_0121 gi|3322385|gb|AAC65111.1| conserved hypothetical protein [Treponema pallidum subsp. pallidum str. Nichols] gi|189017930|gb|ACD70548.1| hypothetical protein TPASS_0121 [Treponema pallidum subsp. pallidum SS14] gi|291059540|gb|ADD72275.1| putative radical SAM domain protein [Treponema pallidum subsp. pallidum str. Chicago] Length = 355 Score = 298 bits (763), Expect = 9e-79, Method: Composition-based stats. Identities = 99/317 (31%), Positives = 159/317 (50%), Gaps = 9/317 (2%) Query: 39 LTPVIANLINPHNPNDP--IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 ++P A+LI D + RQ +E + E DP+G++ + +VH+Y +R Sbjct: 40 ISPAYAHLIAQAQGADAQALKRQVCFAPQERVVHACECADPLGEDRYCVTPFLVHQYANR 99 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L+ C +CR+CFRR + + G + + ++ E + Y++ + E++ +GGDPL Sbjct: 100 VLMLATGRCFSHCRYCFRRGFIAQRAGWIPN-EEREKIITYLRATPSVKEILVSGGDPLT 158 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 S ++ + + LR + I+R +R PQ PELI L+E KPV+I H NHP Sbjct: 159 GSFAQVTSLFRALRSVAPDLIIRLCTRAVTFAPQAFTPELIAFLQEM-KPVWIIPHINHP 217 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E A + AG+ + SQSVLL+G+ND E L L L +KP YL DL Sbjct: 218 AELGSTQRAVLEACVGAGLPVQSQSVLLRGVNDSVETLCTLFHALTCLGVKPGYLFQLDL 277 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK-----VG 331 A GT FR+ + + + +LKE++SGL P +DLPGG GK + +++ Sbjct: 278 APGTGDFRVPLSDTLALWRTLKERLSGLSLPTLAVDLPGGGGKFPLVALALQQDVTWHQE 337 Query: 332 NGSYCITDHHNIVHDYP 348 ++ + YP Sbjct: 338 REAFSARGIDGAWYTYP 354 >gi|38567180|emb|CAE76473.1| related to L-lysine 2, 3-aminomutase [Neurospora crassa] Length = 519 Score = 297 bits (760), Expect = 2e-78, Method: Composition-based stats. Identities = 95/384 (24%), Positives = 168/384 (43%), Gaps = 69/384 (17%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQI-------------DEIKEI-----SNHYSIALTPV 42 Q+ + + + + E++ + IK++ + +I +TP Sbjct: 149 WQVANTVQGTVKLFKFLQTVVPEEVPVDKLGMQMQSRDEFIKDVLDGVAAATMAIRMTPY 208 Query: 43 IANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100 I + IN +P +DPIARQF+P K L P+ D + + SP+KG+ P R Sbjct: 209 ILSRINWLDPRHDPIARQFLPMKSIMLPDHPKLTLDSLHETADSPVKGLASLKPTR---- 264 Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 + E A AYI+ + ++ +++ +GGD L + Sbjct: 265 ----------------------------RRWEEAFAYIESRPELQDIVVSGGDSYYLQPE 296 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL-------KEAGKPVYIA 210 +L + + L + +++ RF S+ V P RI E + L K+AGK + + Sbjct: 297 QLTLIGERLISLPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISNKAKKAGKSMALH 356 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 H N P E S + A +L G+++ +Q+VLL+G+NDD E ++ L+R + I PYY Sbjct: 357 THFNSPNEISWISSDASQKLFENGVMVRNQTVLLRGVNDDYETMSTLIRQLADNNITPYY 416 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKV 330 ++ DL H R ++ + A ++ I+G P +++DLPGG GK ++ Sbjct: 417 VYQCDLVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGGKRLACSYQSYDR 476 Query: 331 GNGSYCI-------TDHHNIVHDY 347 G D + V++Y Sbjct: 477 DTGVSTFVAPAVTGRDKADKVYEY 500 >gi|145595294|ref|YP_001159591.1| hypothetical protein Strop_2771 [Salinispora tropica CNB-440] gi|145304631|gb|ABP55213.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440] Length = 448 Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats. Identities = 81/367 (22%), Positives = 149/367 (40%), Gaps = 45/367 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + R +L + + + I+ IS + + + LI+ P+DPI R Sbjct: 13 RFRSFGPHHIDELGARYGLSADNVRAIRTISRVLPFRVNEYVLSHLIDWDRIPDDPIFRL 72 Query: 60 FIPQKEEL-------------------------NILPEEREDPIGDNNHSP-------LK 87 PQ+ L I P G H+ L Sbjct: 73 VFPQRGMLAAADERLLGDLLGAGDRTGLRVEVARIRAGLNPHPSGQQQHNVPHLDGHELP 132 Query: 88 GIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 G+ H+Y + +L C YC +CFR ++ E + Y+ + Sbjct: 133 GMQHKYRETVLYFPQQGQTCHAYCTYCFRWAQFVGDADLRFAAPGPEQLVTYLHRHPAVT 192 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----PELIQCL 200 +V+ TGGDP+I+S +RL+ ++ L + V+ +RF ++ P R +L++ Sbjct: 193 DVLVTGGDPMIMSTERLRSHVEPLLRVDTVRTVRFGTKAVAYWPYRFVSDSDADDLLRLF 252 Query: 201 KE---AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 + AG+ V + H +HP E + E A AI+R+ + G ++ Q+ L++ +NDDP ++ Sbjct: 253 AQVVAAGRNVAVMAHFSHPRELATEIATRAIARIRSTGAVVYCQAPLIRYVNDDPHAWSD 312 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 + R + L PYY+ +F++ + I + + + GL + + Sbjct: 313 MWRAELALGAVPYYMFVERDTGPRDYFQVPLTRAADIFRTAYQDLPGLARTVRGPVMSAT 372 Query: 317 YGKVKID 323 GKV +D Sbjct: 373 PGKVLVD 379 >gi|77918358|ref|YP_356173.1| hypothetical protein Pcar_0744 [Pelobacter carbinolicus DSM 2380] gi|77544441|gb|ABA88003.1| L-lysine 2,3-aminomutase [Pelobacter carbinolicus DSM 2380] Length = 442 Score = 296 bits (758), Expect = 4e-78, Method: Composition-based stats. Identities = 86/385 (22%), Positives = 150/385 (38%), Gaps = 50/385 (12%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58 M+ T + + E +K +S + + + LI+ P+DP+ R Sbjct: 1 MEYHAYTPDHFDRIAELGCLSAEYRFGMKVVSQVLPFRVNRYVIDELIDWGKVPHDPMFR 60 Query: 59 QFIPQKEELNILPEER--------------------------EDPIGDN-------NHSP 85 P L ++ P G + Sbjct: 61 LVFPDPGMLLPDDFKQIASLLASGADRQALDRAVHEIRLRLNPHPAGQQTLNVPCLDGHK 120 Query: 86 LKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L G+ H+Y + +L C YC FCFR ++ + T Y++ S+ Sbjct: 121 LPGLQHKYRETVLFFPRLGQTCHSYCSFCFRWPQFVCERDMRIMGPRTPGLFDYLRRHSE 180 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------ 195 + +++ TGGDPL++ L + L+ L H+Q +R ++ P R + Sbjct: 181 VTDLLVTGGDPLVMKAASLAEFLEPLLSPEFAHLQTIRIGTKSLSFWPYRFLTDRDADDL 240 Query: 196 --LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 L + L + GK + + H NH E +E A AI R+ G + +QS ++ +NDDP+ Sbjct: 241 LRLFERLVKGGKHLAVMAHYNHWRELETEVARRAIERVKATGATIRTQSPVVAHVNDDPQ 300 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 + L +T V L + PYYL +F + +E +I +K+SGL + Sbjct: 301 VWVRLWQTQVRLGMVPYYLFVARDTGARHYFAIPLERCWQIYRQAIQKLSGLARTVRGPS 360 Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCI 337 + G GKV+I + +VG + Sbjct: 361 MSAGPGKVEI--QGVAEVGQEKVFV 383 >gi|329765548|ref|ZP_08257124.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137986|gb|EGG42246.1| lysine 2,3-aminomutase related protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 455 Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats. Identities = 82/384 (21%), Positives = 157/384 (40%), Gaps = 50/384 (13%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 +L+ TL + ++L + ++ E++ + N + LI+ +N PNDP+ Sbjct: 15 RLKSYTLANFRELPQIQKMGAKKQFEMEVVGNVLPFKTNNYVIEQLIDWNNIPNDPMFVL 74 Query: 60 FIPQKEELNILPEER-------------------------EDPIGD--------NNHSPL 86 PQ+ L + P G + + L Sbjct: 75 TFPQRGMLIPEHYSKMESALKKGDKKEIQNTANEIRLQLNPHPAGQMELNVPTLKDGTKL 134 Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + L C YC FCFR + ++ E + Y++E +I Sbjct: 135 YGMQHKYKETCLFFPSQSQTCHAYCSFCFRWPQFVGMDELKFAMREGEQLVQYLREHPEI 194 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PELI 197 +V+FTGGDP+I+ K + L + +++ +R ++ P + E++ Sbjct: 195 SDVLFTGGDPMIMKAKIFSTYINPLLEANLPNLRTIRIGTKALSYWPYKFLTEDDAEEML 254 Query: 198 QCLKE---AGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 K G + + H NH E ++ AI ++ G + +QS LL+ INDD ++ Sbjct: 255 DIFKRVVDKGIHLAVMGHFNHLVELKTDAVKEAIKKIRATGAQIRTQSPLLRHINDDADM 314 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A + + V+L PYY+ +F +++ + Q+I +K++GL + + Sbjct: 315 WAEMWKVQVQLGCIPYYMFVVRDTGAQHYFGISLIDAQRIFRDAYKKVTGLARTVRGPSM 374 Query: 314 PGGYGKVKIDTHNIKKVGNGSYCI 337 GKV+I I +V + + + Sbjct: 375 SATPGKVQIL--GITEVNDEKFMV 396 >gi|85118412|ref|XP_965436.1| hypothetical protein NCU02663 [Neurospora crassa OR74A] gi|28927245|gb|EAA36200.1| conserved hypothetical protein [Neurospora crassa OR74A] Length = 492 Score = 295 bits (755), Expect = 8e-78, Method: Composition-based stats. Identities = 91/336 (27%), Positives = 154/336 (45%), Gaps = 51/336 (15%) Query: 31 ISNHYSIALTPVIANLINPHNP-NDPIARQFIPQKE-ELNILPEEREDPIGDNNHSPLKG 88 + +I +TP I + IN +P +DPIARQF+P K L P+ D + + SP+KG Sbjct: 170 AAATMAIRMTPYILSRINWLDPRHDPIARQFLPMKSIMLPDHPKLTLDSLHETADSPVKG 229 Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + P R + E A AYI+ + ++ +++ Sbjct: 230 LASLKPTR--------------------------------RRWEEAFAYIESRPELQDIV 257 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE---LIQCL----- 200 +GGD L ++L + + L + +++ RF S+ V P RI E + L Sbjct: 258 VSGGDSYYLQPEQLTLIGERLISLPNIKRFRFASKGLAVAPTRILDESDGWVNALIDISN 317 Query: 201 --KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 K+AGK + + H N P E S + A +L G+++ +Q+VLL+G+NDD E ++ L+ Sbjct: 318 KAKKAGKSMALHTHFNSPNEISWISSDASQKLFENGVMVRNQTVLLRGVNDDYETMSTLI 377 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318 R + I PYY++ DL H R ++ + A ++ I+G P +++DLPGG G Sbjct: 378 RQLADNNITPYYVYQCDLVERVEHLRTPLQTILDLEAKIRGSIAGFMTPSFVVDLPGGGG 437 Query: 319 KVKIDTHNIKKVGNGSYCI-------TDHHNIVHDY 347 K ++ G D + V++Y Sbjct: 438 KRLACSYQSYDRDTGVSTFVAPAVTGRDKADKVYEY 473 >gi|271970119|ref|YP_003344315.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021] gi|270513294|gb|ACZ91572.1| L-lysine 2,3-aminomutase [Streptosporangium roseum DSM 43021] Length = 461 Score = 294 bits (754), Expect = 1e-77, Method: Composition-based stats. Identities = 86/370 (23%), Positives = 158/370 (42%), Gaps = 52/370 (14%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60 R T DL + E+ I+ ++ + + LI+ P+DPI R Sbjct: 11 FRAYTAKHLDDLLLRAGLGDEERLRIRAVATVLPFRTNAYVVDQLIDWSAIPDDPIYRLV 70 Query: 61 IPQKEEL--------------------------------NILPEEREDP----IGDNNHS 84 PQ + L N P + D +G++ Sbjct: 71 FPQADMLPEPDVTRLAGLLRAGAPNAEIQAAAREVRMRLNPHPAGQLDLNVPRVGED--- 127 Query: 85 PLKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 P+ G+ H+YP+ +L C YC +CFR + +S D + + Y+++ Sbjct: 128 PMPGMQHKYPETVLFFPKQGQTCHAYCTYCFRWAQFIGEPDLKFASDDVDNLVGYLKKHP 187 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCL 200 ++ V+FTGGDP+I+S L++ L+ L ++ ++ +R ++ PQR +P+ L Sbjct: 188 RVTSVLFTGGDPMIMSESVLRRYLEPLLELEQLESIRIGTKSLAYWPQRFVSDPDAADTL 247 Query: 201 K------EAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 + +AGK + H +HP E S A AA++ + G ++ +Q+ L++ INDDP Sbjct: 248 RLFASVVDAGKNLAFMAHFSHPREMESPVAEAAVAGILATGAVIRTQAPLIRTINDDPAT 307 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 +++ R + + + PYY+ +F + + +I +SGLC+ + Sbjct: 308 WSSMWRRQLTMGMVPYYMFVERDTGPQDYFAVPLARAHEIFRDAYASVSGLCRTVRGPSM 367 Query: 314 PGGYGKVKID 323 GKV +D Sbjct: 368 SATPGKVCVD 377 >gi|167947045|ref|ZP_02534119.1| hypothetical protein Epers_11032 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 316 Score = 294 bits (753), Expect = 1e-77, Method: Composition-based stats. Identities = 85/276 (30%), Positives = 157/276 (56%), Gaps = 11/276 (3%) Query: 1 MQ--LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIAR 58 Q L+ + + S L + + +++ + ++E+ + + + +L+N ++ NDPI + Sbjct: 17 WQSELK-QNINSIDSLKHYIDLSEDEEEVLREVVGQHPMNIPRYYLSLLNEYDTNDPIRK 75 Query: 59 QFIPQKEELNI---LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 +P ++EL + + E +DP GD+ H+ G++H+YP L+ C +YCR CFR+ Sbjct: 76 LALPSEDELIVAGSMGETTKDPYGDDKHNKGNGVLHKYPYSALIVATDYCSMYCRHCFRK 135 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 +VG + ++ + A YI+E +I VI +GGDPL+++ +R++K+L++L I HV Sbjct: 136 AIVGLPNDKTV--ENFQRAATYIREHKEITNVIISGGDPLLINTRRIKKILESLVDIDHV 193 Query: 176 QILRFHSRVPIVDPQR-INPELIQCLKEAGKP--VYIAIHANHPYEFSEEAIAAISRLAN 232 +R +R P+V P R + +L++C +E K +Y+ H NH E + A A+ R+ Sbjct: 194 NYVRLGTRTPVVYPMRFFDDDLLKCFEEFNKHKTLYLPTHFNHANEITNIAKEAVLRIRQ 253 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 G+ + +Q+VLL+G+ND + NLM V + KP Sbjct: 254 TGVTVNNQAVLLEGVNDSASDIENLMNGLVTIWRKP 289 >gi|239944852|ref|ZP_04696789.1| hypothetical protein SrosN15_27950 [Streptomyces roseosporus NRRL 15998] gi|239991318|ref|ZP_04711982.1| hypothetical protein SrosN1_28712 [Streptomyces roseosporus NRRL 11379] gi|291448314|ref|ZP_06587704.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998] gi|291351261|gb|EFE78165.1| L-lysine 2,3-aminomutase [Streptomyces roseosporus NRRL 15998] Length = 448 Score = 293 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 76/370 (20%), Positives = 149/370 (40%), Gaps = 48/370 (12%) Query: 12 QDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL-- 67 ++ + ++ ++ +S + + + LI+ H P DPI + PQ L Sbjct: 23 DEVAARYGMSHSALETVRAVSRVLPFRVNDYVLSELIDWHRVPEDPIFQLVFPQHGMLRA 82 Query: 68 ------------------------------NILP-EEREDPIGDNNHSPLKGIVHRYPDR 96 N P + E + L+GI H+Y + Sbjct: 83 EDEKLLVDLARARAPKREIAAEVRRIRAGLNPHPSGQMELNVPSLADDALEGIQHKYRET 142 Query: 97 ILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 +L C YC +CFR ++ E + Y++ + +V+FTGGDP Sbjct: 143 VLYFPQQGQTCHSYCTYCFRWAQFIGDADLRFAAPGPERLVEYLRCHPAVSDVLFTGGDP 202 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKP 206 +++S +RL+ L+ + ++ V+ +R ++ PQR + L + + +G+ Sbjct: 203 MVMSTERLRSHLEPVLSVETVRTVRIGTKAVAYWPQRFVSDADADDLLRLFEQVVASGRT 262 Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 + + H +HP E + A A+ R+ G ++ Q+ L+ +NDD A L R + Sbjct: 263 LAVMAHFSHPRELETATARRALGRVRATGAVVYCQAPLIAHVNDDARTWAELWRAELSAG 322 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 PYY+ +F + + +G +I + K+ GL + + GKV +D Sbjct: 323 TVPYYMFVERDTGPRHYFEVPLTKGLEIFRTAYSKLPGLARTVRGPVMSATPGKVLVD-- 380 Query: 326 NIKKVGNGSY 335 +++ G + Sbjct: 381 GVEETAEGRF 390 >gi|108758698|ref|YP_632865.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622] gi|108462578|gb|ABF87763.1| putative L-lysine 2,3-aminomutase [Myxococcus xanthus DK 1622] Length = 456 Score = 293 bits (752), Expect = 2e-77, Method: Composition-based stats. Identities = 83/372 (22%), Positives = 167/372 (44%), Gaps = 30/372 (8%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISN---HYSIALTPVIANLINPHN-PND 54 Q +H T+ + ++L L+ + + ++ S+ + P + N +N + D Sbjct: 51 WQRKH-TIKNLKELKATLGALLPDDLAESMERDQRERATMSLLVPPQMLNTMNLEDLWRD 109 Query: 55 PIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 P+ R +P + E P+ D + + + ++G+ HRYP ++L ++L CP YC Sbjct: 110 PVRRYMLPAYADRLTEWTNHPKASRDSLHEQDMWVVEGLTHRYPTKVLAEMLPTCPQYCG 169 Query: 111 FCFRREMVGSQKGTVLS-------SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C R ++VG+ V L Y++ + +V+ +GGD L ++L+ Sbjct: 170 HCTRMDLVGNDVPQVSKHKFGIGPKDRYAQMLDYLRRTPTVRDVVVSGGDIANLPIQQLE 229 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANH 215 + +L I +++ +R S+ + PQ + L + E G + + H NH Sbjct: 230 PFVSSLMDIPNIRDIRLASKGLMAIPQHFLQDSVLQGLDRLAKKAVERGVDLALHTHVNH 289 Query: 216 PYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHH 273 + + A+ +L G + +Q VLL+G+ND P+ L +L T ++ +I PYY + Sbjct: 290 AQQLTPLVGKAVRKLLEMGFRDVRNQGVLLRGVNDSPQALLDLCFTLLDHAKILPYYFYM 349 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHNIKKVGN 332 D+ + H+RL++ + Q++ + + G P + D+P GK + + Sbjct: 350 CDMIPNSEHWRLSVAQAQQLQHDIMGYMPGFATPRIVCDVP-FVGKRWVHQVAEYDRERG 408 Query: 333 GSYCITDHHNIV 344 SY ++ + Sbjct: 409 ISYWTKNYRTGI 420 >gi|312602176|ref|YP_004022021.1| lysine2,3-aminomutase [Burkholderia rhizoxinica HKI 454] gi|312169490|emb|CBW76502.1| LYSINE 2,3-AMINOMUTASE (EC 5.4.3.2) [Burkholderia rhizoxinica HKI 454] Length = 459 Score = 293 bits (750), Expect = 3e-77, Method: Composition-based stats. Identities = 89/370 (24%), Positives = 152/370 (41%), Gaps = 48/370 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + + T S Q + + + + +K IS + + LIN P+DPI R Sbjct: 9 KFKPYTRQSIQQAHQWATLPENLREAVKVISRVLPFRTNQYVLDTLINWERVPDDPIYRL 68 Query: 60 FIPQKEELNILPEER--------------------------EDPIGDNNHSP-------L 86 P + L P G H+ + Sbjct: 69 TFPHSDMLPADEYATLRDLVLIKQDEAAIENEVRKIRMRMNPHPAGQMTHNVPILDGKRM 128 Query: 87 KGIVHRYPDRILLKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + +L C YC FCFR +G +K + +AY++ +++ Sbjct: 129 HGLQHKYKETVLFFPSAGQTCHAYCTFCFRWPQFVGMEGLKFDAKASNELVAYLRRHTEV 188 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE------- 195 +V+ TGGDPLI++ + L ++ L + H+Q +R ++ PQR + Sbjct: 189 TDVLITGGDPLIMNTRSLADYIEPLLSPELAHIQNIRIGTKSVAYWPQRFVTDKDADDLL 248 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L + + AGK + + H NHP E + A A+ R+ ++G L QS L++ INDD + Sbjct: 249 WLFEKVVNAGKNLAVMGHYNHPVELRPDIAQKAVKRIVSSGATLRMQSPLIRHINDDAKA 308 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A L T V L PYY+ +F+L + + +I + + +SGL + + Sbjct: 309 WAELWTTGVRLGAIPYYMFIERDTGPRQYFQLPLIKSYEIFQAAYQSVSGLSRTVRGPSM 368 Query: 314 PGGYGKVKID 323 GKV +D Sbjct: 369 SAFPGKVVVD 378 >gi|307133226|ref|YP_003885242.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937] gi|306530755|gb|ADN00686.1| Lysine 2,3-aminomutase [Dickeya dadantii 3937] Length = 386 Score = 292 bits (747), Expect = 9e-77, Method: Composition-based stats. Identities = 96/363 (26%), Positives = 161/363 (44%), Gaps = 21/363 (5%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPND----PI 56 Q ++ +E I + +TP ANLI D P+ Sbjct: 24 WQQKNAIRDEPALRSACGGWSEEVAQHIANNLKDRKMQITPYYANLIRQAAYTDIVDNPL 83 Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCF-- 113 RQ +P + + + E + +H H+Y +R++L++++ C YC+FCF Sbjct: 84 WRQVVPFWHDDGVTGYDGESENWELSHEMKTPICQHKYDNRVILRMVNTCNSYCQFCFEA 143 Query: 114 -RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 R V S+K K + +L YI++ ++ EVI +GGDP++L+ +L + L +R I Sbjct: 144 LRTLKVDSEKENA-GRKAFQDSLDYIRQTPEVEEVILSGGDPMMLTDAKLDECLGAIRNI 202 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 + ++R HSR +P RI L+ L+ +H HP E S+ A+ R+ Sbjct: 203 RDSLLIRIHSRSLTFNPYRITDTLLDILQRHRVN-AFGVHVCHPLELSDAFRDAVKRIQQ 261 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEGQ 291 I+ S LL+G+ND+ E L +L + +KPYYL+H + G S ++ +I + Sbjct: 262 VVPIVFSNMPLLRGVNDNEETLKSLFIELYRMGVKPYYLYHFMPFSPGASEYKASIRDAI 321 Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHHNI 343 I+ LK ++S + P Y+ LP GK V + G Y T+ Sbjct: 322 AIMNRLKRRVSNIALPEYV--LPHAKGKFTVPLLSGVEEMPQFEDIDGRRFYRFTNWQGD 379 Query: 344 VHD 346 V Sbjct: 380 VCR 382 >gi|297196895|ref|ZP_06914292.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083] gi|197711500|gb|EDY55534.1| L-lysine 2,3-aminomutase [Streptomyces sviceus ATCC 29083] Length = 438 Score = 292 bits (747), Expect = 9e-77, Method: Composition-based stats. Identities = 76/380 (20%), Positives = 149/380 (39%), Gaps = 48/380 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIARQ 59 + R D+ + + D I +++ + + + LI+ +P DPI R Sbjct: 13 RFRAFGPRQIDDIARRYGLSPKIRDGIALLAHVLPFRVNEYVLDQLIDWTDPAQDPIFRL 72 Query: 60 FIPQKEEL--------------------------NILPEEREDPIGDNNHSP-------L 86 PQ+ L I P G ++ L Sbjct: 73 VFPQRGMLPEDDERSLESLVRSGAAKREMAAEVARIRAGLNPHPSGQREYNVPVHEGERL 132 Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + +L C +C +CFR ++ + ++Y+ + ++ Sbjct: 133 AGLQHKYRETVLYFPTQGQSCHSFCTYCFRWAQFVGDPSLRFAAPGPDRLVSYLHDHPEV 192 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------L 196 +V+ TGGDP+++S +RL L+ L ++ V +R ++ PQR + L Sbjct: 193 SDVLVTGGDPMVMSTERLTGHLEPLLGVESVNTVRIGTKSLAYWPQRFVSDADADSLLRL 252 Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + + GK V + H HP E + A+ R+ G ++ Q+ ++ INDD E A Sbjct: 253 FERIAATGKQVAVMAHFTHPRELRTARVTEAVRRIRATGAVVYCQAPMVAHINDDAETWA 312 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 ++ ++ + L PYY+ +F++ + +I + + GL + + Sbjct: 313 SMWKSELALGAVPYYMFVERDTGPYDYFKVPLARAMEIFHTAYRTLPGLARTVRGPVMST 372 Query: 316 GYGKVKIDTHNIKKVGNGSY 335 GKV +D ++ +G Y Sbjct: 373 TPGKVVVD--GVETLGGDRY 390 >gi|169608816|ref|XP_001797827.1| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15] gi|160701722|gb|EAT84959.2| hypothetical protein SNOG_07493 [Phaeosphaeria nodorum SN15] Length = 487 Score = 292 bits (747), Expect = 9e-77, Method: Composition-based stats. Identities = 91/342 (26%), Positives = 156/342 (45%), Gaps = 41/342 (11%) Query: 14 LYNANLIKKEQIDEIKEISNHYSI--ALTPVIANLINPHNP-NDPIARQFIPQKEELNIL 70 L K+ I++ + + +TP + + I+ +NP +DPI +QFIP + Sbjct: 61 LLRKITHKEAFIEDAVAATKLAPMAIRITPHVLSRIDWNNPLDDPIRKQFIPLASCIIPD 120 Query: 71 PEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 E + D + + S +YCRFC R VG TV Sbjct: 121 HEHLKLDSLEEEKDS----------------------LYCRFCTRSYAVGGGTDTVTKRP 158 Query: 130 D------TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 E Y++ + +++ +GGD L + L ++ + L ++ +++ +RF S+ Sbjct: 159 QKPSLTRWEKVFEYVENCKDLKDIVVSGGDAYYLQPEDLLRMGRRLLHMDNIERVRFASK 218 Query: 184 VPIVDPQRINP---------ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 V P RI EL + GK V + H NHP E + A + L G Sbjct: 219 GLAVAPGRICEGDPWTEALIELSNLGRSLGKQVCLHTHINHPREITWVTKTAANYLFKHG 278 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 +I+ +QSVLLKG+N+DP I+++L++ + I+PYY++ D+ G R ++E + Sbjct: 279 VIVRNQSVLLKGVNNDPVIMSDLIQGLSSINIQPYYVYQCDMVQGIEDLRTPLQEIIDLD 338 Query: 295 ASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336 L+ +SG P +++DLPGG GK + T + G +Y Sbjct: 339 KQLRGTLSGFMMPAFVIDLPGGGGKRLVSTMESYENGVATYR 380 >gi|167045081|gb|ABZ09744.1| putative Radical SAM superfamily protein [uncultured marine crenarchaeote HF4000_APKG8I13] Length = 449 Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats. Identities = 79/386 (20%), Positives = 147/386 (38%), Gaps = 51/386 (13%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60 ++ TL + + + + KE E++ + N + LI+ N PNDP+ Sbjct: 16 IKSYTLMNFRIIPQIQQMSKEDQFEMEVVGNVLPFKTNNYVVEQLIDWDNVPNDPMYVLT 75 Query: 61 IPQKEELNILPEER--------------------------EDPIGD--------NNHSPL 86 PQK L ++ P G + + L Sbjct: 76 FPQKGMLIPEHYDKMASTLSSGADKKEVQRVANDIRLQLNPHPAGQMELNVPQLRDGTKL 135 Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + L C YC FCFR + ++ E + Y++E +I Sbjct: 136 YGMQHKYDETCLFFPSQSQTCHAYCSFCFRWPQFVGMDEMKFAMREGEQLVQYLKEHPEI 195 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195 +V+FTGGDP+I+ L + +++ +R ++ P + + Sbjct: 196 SDVLFTGGDPMIMKASMFSVYTDALLDAKLPNLKTIRIGTKAISYWPYKFLTDSDADETL 255 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 + + E+G + I H NH E ++ A+ R+ G + +QS LL INDD ++ Sbjct: 256 KNFEKIVESGTHLAIMAHFNHLVELSTDPIKEAVKRIRKTGAQIRTQSPLLAHINDDTDM 315 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A + + V L PYY+ +F + + + +KI ++SGL + + Sbjct: 316 WAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRDAFRQVSGLARTVRGPSM 375 Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITD 339 GKV + + ++ + Sbjct: 376 SATPGKVHVL--GVSEINGQKVIVLQ 399 >gi|182412197|ref|YP_001817263.1| radical SAM domain-containing protein [Opitutus terrae PB90-1] gi|177839411|gb|ACB73663.1| Radical SAM domain protein [Opitutus terrae PB90-1] Length = 468 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 82/358 (22%), Positives = 149/358 (41%), Gaps = 48/358 (13%) Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL---- 67 + + + + ++ ++ + + LI+ +N P DP+ + PQ L Sbjct: 23 IPQLQRLPADTLLAMRAVAAVLPFRVNQYVVEELIDWNNLPADPMFQLTFPQPGMLAEAD 82 Query: 68 ----------------------------NILP-EEREDPIGDNNHSPLKGIVHRYPDRIL 98 N P + E + + PL G+ H+Y D +L Sbjct: 83 LAKMMRLLADGADQPTIERAARQIQRRLNPHPAGQMELNVPYFDGQPLSGMQHKYRDTVL 142 Query: 99 LKLL--HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 C YC +CFR +S+ E+ +AY++E ++ V+FTGGDPL+ Sbjct: 143 FFPSPGQTCHTYCTYCFRWPQFVGLDELKFASRQAESLVAYLKEHPEVSNVLFTGGDPLV 202 Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKP 206 + L++ ++ L ++H+ +R ++ P P R E L ++ AG+ Sbjct: 203 MRTAVLRRYIEPLLSPELEHISAIRIGTKSPAWWPYRFVNEPDSDDLLRLFDQVRAAGRH 262 Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 + I H + P E + A AA+ R+ + G I+ Q+ L++ +NDD + A+L R V L Sbjct: 263 MAIMAHYSRPRELQTPVAQAALRRIKSTGAIVRCQAPLIRHVNDDADTWADLWRLQVRLG 322 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 PYY+ +F + + +I ++SGL + + GKV ID Sbjct: 323 AVPYYMFVERDTGPKGYFEVPLARCYEIFQKAYRRVSGLERTVRGPSMSATPGKVIID 380 >gi|167042471|gb|ABZ07196.1| putative Radical SAM superfamily protein [uncultured marine crenarchaeote HF4000_ANIW133C7] Length = 447 Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats. Identities = 79/386 (20%), Positives = 148/386 (38%), Gaps = 51/386 (13%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQF 60 ++ TL + + + + +E E++ + N + LI+ N PNDP+ Sbjct: 16 IKTYTLINFRKIPQIQQMPEEVQFEMEVVGNVLPFKTNNYVVEQLIDWDNIPNDPMYVLT 75 Query: 61 IPQKEELNILPEER--------------------------EDPIGD--------NNHSPL 86 PQK L ++ P G + + L Sbjct: 76 FPQKGMLIPEHYDKMASTLRSGADKKEIARVANDIRLQLNPHPAGQMELNVPQLKDGTKL 135 Query: 87 KGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + L C YC FCFR + ++ E + Y++E ++ Sbjct: 136 YGMQHKYDETCLFFPSQSQTCHAYCTFCFRWPQFVGMDEMKFAMREGEQLVQYLKEHPEV 195 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPE------- 195 +V+FTGGDP+I+ TL + +++ +R ++ P + + Sbjct: 196 TDVLFTGGDPMIMKASMFSAYTDTLLDAKLPNLKTIRIGTKAISYWPYKFLTDSDADETL 255 Query: 196 -LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 + + ++G + I H NH E ++ AI R+ G + +QS LL INDD + Sbjct: 256 KNFEKIVKSGTHLAIMAHFNHLVELSTDPIKEAIKRIRKTGAQIRTQSPLLAHINDDSSM 315 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 A + + V L PYY+ +F + + + +KI S ++SGL + + Sbjct: 316 WAKMWQKQVSLGCIPYYMFVVRDTGAQHYFGVPLVKAEKIFRSAFRQVSGLARTVRGPSM 375 Query: 314 PGGYGKVKIDTHNIKKVGNGSYCITD 339 GKV + + ++ + Sbjct: 376 SATPGKVHVL--GVSEINGQKVIVLQ 399 >gi|224368753|ref|YP_002602914.1| KamA3 [Desulfobacterium autotrophicum HRM2] gi|223691469|gb|ACN14752.1| KamA3 [Desulfobacterium autotrophicum HRM2] Length = 440 Score = 288 bits (737), Expect = 1e-75, Method: Composition-based stats. Identities = 86/370 (23%), Positives = 148/370 (40%), Gaps = 48/370 (12%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIAR 58 M+ + T + + L N + EQI I+ + + N LIN + NDP+ Sbjct: 1 MRYKPYTNKNLKSLPQFNRLTPEQIFNIQVVGTVLPFKTNNYVVNELINWDDFENDPMFI 60 Query: 59 QFIPQKEEL--------------------------------NILPEERED-PIGDNNHSP 85 PQ+E L N P + D + + Sbjct: 61 LNFPQREMLAKKHFNTMAALVKANASKERITMAANRIRHSLNPHPAGQIDKNVPVLDGQR 120 Query: 86 LKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 L GI H+Y + +L C +C FCFR G + KD + + Y++ + + Sbjct: 121 LNGIQHKYRETMLFFPTQGQTCHAFCSFCFRWPQFTGMDGHRFAMKDADLMVRYVRSQPE 180 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINP------- 194 + +++FTGGDPL +S K L L + + ++ +R ++ P R Sbjct: 181 LTDILFTGGDPLTMSTKILSVYLNAIIDAKLPGIRTIRIGTKTLSFWPYRFTTDKDSAEL 240 Query: 195 -ELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 EL + + +AG + I H NHP E + E A+ + G ++ SQS +L IN + Sbjct: 241 LELFKRVTDAGIHLAIMSHLNHPREIATPECKRAVEAIRGTGAVIRSQSPVLNRINASAK 300 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 I + + + + L I PYY+ +F + + + KI +SG+ + Sbjct: 301 IWSKMWQDQISLGIVPYYMFVARNTGAQDYFSIPLVDTWKIFRDAYSSVSGISRTVRGPS 360 Query: 313 LPGGYGKVKI 322 + GK+KI Sbjct: 361 MSASPGKIKI 370 >gi|27383343|ref|NP_774872.1| hypothetical protein bll8232 [Bradyrhizobium japonicum USDA 110] gi|27356518|dbj|BAC53497.1| bll8232 [Bradyrhizobium japonicum USDA 110] Length = 499 Score = 286 bits (733), Expect = 4e-75, Method: Composition-based stats. Identities = 89/310 (28%), Positives = 147/310 (47%), Gaps = 15/310 (4%) Query: 40 TPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL 99 T + I D + P E D G+++++ + G+ H+Y LL Sbjct: 175 TNFYRDQITNSGYYDQLKYIVEPTIAEFKSPG--SLDTSGEHDNTVVPGLQHKYAQTGLL 232 Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 + C YCR+CFR+ +VG + D YI ++ V+ +GGDP +LS Sbjct: 233 LVTDRCASYCRYCFRKRIVGKDSDEIAP--DFARVAQYIAGHPEMTNVLLSGGDPFVLST 290 Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI----NPELIQCLKEAGKPVYIAIHANH 215 +L K+L L I H++ +RF +++ P+R P L + + EAGK I H +H Sbjct: 291 AKLGKILDHLLPIPHLESIRFGTKIVAFAPRRFEDPALPALFRRISEAGKTAVIVAHFDH 350 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275 E S +A I L G+ L+QSVLL +NDDPEILA ++ ++PYYL Sbjct: 351 IGEISVDAERNIRALRAQGVQFLNQSVLLAKVNDDPEILAATFAKCHQMGVRPYYLFQGR 410 Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-FYILDLPGGYGKVKIDTHNIKKVGNGS 334 G SHF++++ G +I + ++SG+ + YI + GK+++ + +G Sbjct: 411 PVKGASHFQVSLRRGIEIARGINRRLSGIQKTFKYI--MSHYTGKIEV----LDLGADGR 464 Query: 335 YCITDHHNIV 344 + H N + Sbjct: 465 VYMRYHQNKI 474 >gi|32967991|gb|AAP92506.1| lysine 2,3-aminomutase [Streptomyces vinaceus] Length = 445 Score = 285 bits (731), Expect = 5e-75, Method: Composition-based stats. Identities = 89/395 (22%), Positives = 162/395 (41%), Gaps = 49/395 (12%) Query: 1 MQLRHKTLTSAQDLYNANL--IKKEQIDEIKEISNHYS---IALTPVIANLINPHNPND- 54 Q R + +A+ L + + D++ E H + + +TP + N I P P D Sbjct: 24 WQ-RAHCVKNARQLRAVVGDGLDDKFYDDLTEDQEHMATMAMLITPQMLNTIAPETPADS 82 Query: 55 ----------PIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100 P+ R +P + + P D + + ++G+ RYP ++L + Sbjct: 83 DGYHDAFYADPVRRYMVPVRSDRDLRWPSHPLSSRDSLHEAEMWVVEGLTRRYPTKVLAE 142 Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGD 153 L+ CP YC C R ++VG +V + EA L +++ + +V+ +GGD Sbjct: 143 LVATCPQYCGHCTRMDLVGGSTPSVDKQRLTLRPADRQEAILDHLRRTPGVRDVVVSGGD 202 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGK 205 + RL+ L L I V+ +R S+ + PQ P+++ L G Sbjct: 203 VANVPWPRLESFLLRLLEIDSVRDIRLASKALVGLPQHWLQPQVVSGLENVAGVAARRGV 262 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE- 263 + + HANH + L +AG+ + +Q VL++G+ND L +L + Sbjct: 263 HLAVHTHANHVQSVTPLVAEGARALLDAGVRDVRNQGVLMRGVNDSTAALLDLCFALQDE 322 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 I PYY + D+ G H+R ++ E Q + ++ + G P + D+P GK + Sbjct: 323 AGILPYYFYMCDMVPGAEHWRTSLAEAQDLQHAIMGYLPGYATPRIVCDVP-YVGKRWVH 381 Query: 324 --THNIKKVGNGSYC--------ITDHHNIVHDYP 348 ++ G + + D + YP Sbjct: 382 QAVEYDRERGISYWTKNYRTAIELDDPDALTRRYP 416 >gi|115380256|ref|ZP_01467274.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1] gi|310822788|ref|YP_003955146.1| hypothetical protein STAUR_5549 [Stigmatella aurantiaca DW4/3-1] gi|115362735|gb|EAU61952.1| lysine 2,3-aminomutase [Stigmatella aurantiaca DW4/3-1] gi|309395860|gb|ADO73319.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 456 Score = 285 bits (731), Expect = 6e-75, Method: Composition-based stats. Identities = 84/372 (22%), Positives = 166/372 (44%), Gaps = 30/372 (8%) Query: 1 MQLRHKTLTSAQDLYNA-NLIKKEQI----DEIKEISNHYSIALTPVIANLINPHN-PND 54 Q +H T+ + ++L A + E++ + ++ S+ L P + N +N + D Sbjct: 51 WQRKH-TVKNLRELRAALGPLLPEELAVSIERDQKERATMSVLLPPQMLNTMNLEDLWGD 109 Query: 55 PIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 P+ R +P + P D + + ++G+ HRYP ++L ++L CP YC Sbjct: 110 PVRRYMLPAFADRLTTWPNHPRASRDSLHEAEMWVVEGLTHRYPTKVLAEMLPTCPQYCG 169 Query: 111 FCFRREMVGSQKGTVLS-------SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C R ++VG+ V + E L Y++ + +V+ +GGD L ++L+ Sbjct: 170 HCTRMDLVGNDVPQVEKHRFSIGPKERYEKMLDYLRRTPSVRDVVVSGGDIANLPIQQLE 229 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANH 215 + +L I +++ +R S+ + PQ + L + E G + + H NH Sbjct: 230 PFVSSLMDIPNIRDIRLASKGLMGIPQHFLQDSVLQGLDRLAKKAVERGVDLALHTHVNH 289 Query: 216 PYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHH 273 + + A+ +L + G + +Q VLL+G+ND L +L T ++ +I PYY + Sbjct: 290 ARQLTPLVGKAVRKLLDMGFRDVRNQGVLLRGVNDSAPALLDLCFTLLDHAKILPYYFYM 349 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHNIKKVGN 332 D+ + H+RL++ + Q + + + G P + D+P GK + + Sbjct: 350 CDMIPNSEHWRLSVAQAQTLQHDIMGYMPGFATPRIVCDVP-FVGKRWVHQVAEYDRERG 408 Query: 333 GSYCITDHHNIV 344 SY ++ + Sbjct: 409 ISYWTKNYRTGI 420 >gi|158335745|ref|YP_001516917.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina MBIC11017] gi|158305986|gb|ABW27603.1| lysine 2,3-aminomutase YodO family protein [Acaryochloris marina MBIC11017] Length = 379 Score = 285 bits (731), Expect = 6e-75, Method: Composition-based stats. Identities = 89/309 (28%), Positives = 154/309 (49%), Gaps = 7/309 (2%) Query: 18 NLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDP 77 + +E D I H+ + A LI+ +P DP+ + +P E + D Sbjct: 29 LPLGEEDCDRITAAQTHFPFMVPEGYAQLIDWQDPTDPLRQLLLPSVYEQDDHG--SLDT 86 Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 G+ + + G+ H+Y +L + C +CR+CFRR ++ T + +D + A+AY Sbjct: 87 SGETLSTVVPGLQHKYEQTAVLIVTQACAGHCRYCFRRRLMSKDVMTKETIEDLQGAIAY 146 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--PE 195 IQ +I V+ +GGDP++ S +RL +L L I H+ +R +++P P R PE Sbjct: 147 IQTHPEIDNVLMSGGDPMVSSTRRLANLLAALAEIPHLWQIRISTKLPAFLPSRFTSDPE 206 Query: 196 LIQCLKEA--GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 L+Q L + + H +HP E + A A++ L NAG +L +Q L++G+N ++ Sbjct: 207 LLQVLAQYQERFQIVFQCHFDHPREITPAAEQALAVLRNAGCLLTAQIPLMQGVNSSVDV 266 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDL 313 + L + L + P YL HP HF+L I EG K+V L+++ +G + L Sbjct: 267 METLFKRLHRLSVLPQYLFHPRPVKHALHFQLPILEGLKLVEGLRQRCNG-SVKRFRYIL 325 Query: 314 PGGYGKVKI 322 +GK+++ Sbjct: 326 THEHGKLEL 334 >gi|134046377|ref|YP_001097862.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C5] gi|132664002|gb|ABO35648.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C5] Length = 594 Score = 285 bits (731), Expect = 6e-75, Method: Composition-based stats. Identities = 82/359 (22%), Positives = 154/359 (42%), Gaps = 30/359 (8%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKE-ISNHYSIALTPVIANLINPHNP---NDPI 56 + + +T + L + + + +I IK+ N +TP +L++ + + I Sbjct: 195 WHMEN-NITDLETLQDLLDLSESEISSIKKACENSIPFGITPYYVSLMDETSSREFDHAI 253 Query: 57 ARQFIPQKEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111 Q IP ++ E R D +G+N+ SP+ + RYP ++K C C + Sbjct: 254 RAQVIPPTRYVDKTLESRTRGNSLDFMGENDTSPVDLVTRRYPMIAIMKPYETCAQICVY 313 Query: 112 CFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 C R + K + + A+ + + I EV+ TGGDP +L + L +L Sbjct: 314 CQRNWQIKDVLSKDALAPKETVLNAIEWFKNHESIKEVLITGGDPALLDDEYLDWILSEF 373 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIA 225 IKHV+ +R +R+P+V PQRI ++ L + +P + ++ H H YE +++ Sbjct: 374 SQIKHVERIRIGTRIPVVLPQRITKNFVEILAKYNEPGIREIAVSTHVEHVYEITKDVQE 433 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 A+S+L N G+ + +Q V + E + L + + I PYYL + T +R+ Sbjct: 434 AVSKLKNKGMSVYNQQVFTVENSRRFET-SALRKVLKLIGIDPYYLFNTKGKDETIDYRV 492 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 I + + + G C + N+ K+G + H+++ Sbjct: 493 PIARALQERSEEARLLPGYC-------------RTDCTVFNVPKLGKNNLNYCQDHDLI 538 >gi|269126573|ref|YP_003299943.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183] gi|268311531|gb|ACY97905.1| Lysine 2,3-aminomutase [Thermomonospora curvata DSM 43183] Length = 456 Score = 285 bits (730), Expect = 6e-75, Method: Composition-based stats. Identities = 84/372 (22%), Positives = 156/372 (41%), Gaps = 33/372 (8%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISN---HYSIALTPVIANLINPHN---- 51 Q R + + + L LI + ++ + +TP + N ++ Sbjct: 46 WQ-RAHCVKNIRQLQQVLGDLIDESFYADLHRDQTGHATMPMLVTPQMLNTMDTSTTEAF 104 Query: 52 PNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107 DP+ R +P + P D + + + ++G+ HRYP ++L +LL CP Sbjct: 105 YADPVRRYMLPVASDRRTDWPSHPCATRDSLHEADMWAVEGLTHRYPTKVLAELLSTCPQ 164 Query: 108 YCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 YC C R ++VG+ V + EA L Y++ + +V+ +GGD L Sbjct: 165 YCGHCTRMDLVGTSTPAVAKHRFTARPADRHEAMLEYLRRTPTVRDVVVSGGDVANLPWP 224 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIH 212 RL+ + L I ++ +R ++ + PQ + L + G + + H Sbjct: 225 RLEAFVDRLLDIDSIRDIRLATKALMALPQHWLQDEVRAGMERLAAKARRRGVALAVHTH 284 Query: 213 ANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYY 270 N + A L AG+ + +Q VLL G+ND P L +L ++ +I PYY Sbjct: 285 VNTARSLTPLVARAARGLLEAGVRDVRNQGVLLHGVNDSPAALLDLSFALLDEAQIMPYY 344 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHNIKK 329 L+ D+ G+ H+RL + Q++ ++ + G P + D+P GK + + + Sbjct: 345 LYMCDMIPGSEHWRLPLWRAQELQHAIMGYLPGFATPRIVCDVP-YVGKRWVHQPADYDR 403 Query: 330 VGNGSYCITDHH 341 + SY ++ Sbjct: 404 LRGISYWTKNYR 415 >gi|323456908|gb|EGB12774.1| hypothetical protein AURANDRAFT_70598 [Aureococcus anophagefferens] Length = 1879 Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 81/347 (23%), Positives = 146/347 (42%), Gaps = 51/347 (14%) Query: 22 KEQIDEIKEISNHYSIALTPVIAN-LINPH---NPN-DPIARQFIPQKEELNILPEERED 76 +E + ++K + + +P + + LI+ + DP + P + L+ E D Sbjct: 793 QENMQDVKRAALIFPFKASPYLVDELIDWDMEADIRTDPFYKLVFPTMDMLSDEHRELLD 852 Query: 77 PIGDNNH---------------SPLK---------------GIVHRYPDRILLKLL--HV 104 + D +P G+ H+Y + +L Sbjct: 853 GVCDAGDPAAIKEAVEEIRESLNPHPAGQKALNAPKKAELTGVQHKYAETVLFFAAAAQT 912 Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C YC +CFR + KD ++ Y++E ++ +++FTGGDP+I+ + L++ Sbjct: 913 CHAYCTYCFRWAQFIGDPDLRFAQKDADSLFDYLEEHPEVSDILFTGGDPMIMQTRMLKQ 972 Query: 165 VLKTLRY---IKHVQILRFHSRVPIVDPQRIN-----PELIQCLKE----AGKPVYIAIH 212 L+ + + H++ LR +R PQR EL+ L+E G+ + I H Sbjct: 973 YLEPFKDPTHLPHIKNLRIGTRALTFWPQRFTTDADADELMTLLREVKEIGGRHMAIMAH 1032 Query: 213 ANHPYEF-SEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 H E +++ AI RL G +I+ SQS +++GINDD ++ A R V L + PYY Sbjct: 1033 LGHVRELSTDKVKHAIHRLKQEGGVIIRSQSPVMRGINDDADVWAAKWREEVRLGVIPYY 1092 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 + S+F + + Q++ A SGLC+ + Sbjct: 1093 MFIARDTGAQSYFDVPLVRAQRLYADAIRATSGLCRTARGPSMSCTP 1139 >gi|150249481|gb|ABR67759.1| CmnP [Saccharothrix mutabilis subsp. capreolus] Length = 448 Score = 285 bits (729), Expect = 8e-75, Method: Composition-based stats. Identities = 83/382 (21%), Positives = 156/382 (40%), Gaps = 39/382 (10%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYS---IALTPVIANLINPHNPND- 54 Q R + + + L L+ + D++ ++ + L P + N + P D Sbjct: 37 WQ-RVHCVRNTRQLRAVVGDLLDERFYDDLAADQESFATMSMLLPPQMLNTMVPEGAADF 95 Query: 55 -------PIARQFIPQKE----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103 P+ R +P + E P D + + ++G+ HRYP ++L +L+ Sbjct: 96 TGAFYADPVRRYMLPVRSDRDPEWPSHPYSSRDSLHEAEMWVVEGLTHRYPTKVLAELVS 155 Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLI 156 CP YC C R ++VG+ V K + L Y++ + +V+ +GGD Sbjct: 156 TCPQYCGHCTRMDLVGNSTPQVRKHKLELKPVDRQDRMLDYLRRTPAVRDVVVSGGDVAN 215 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKPVY 208 + +L+ L L I+ V+ +R ++ PQ + + G + Sbjct: 216 VPWPQLESFLARLLEIETVRDIRLATKALAGLPQHWLQPQVVEGMSRVARTAASRGVNLA 275 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRI 266 + H NH + A L +AG+ + +Q VL++G+N P+ L L E I Sbjct: 276 VHTHVNHAQSVTPLVAEAARALLDAGVRDVRNQGVLMRGVNATPDDLLELCFALQGEANI 335 Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--T 324 PYY + D+ H+R ++ E Q + A++ + G P + D+P GK + Sbjct: 336 LPYYFYLCDMIPNAEHWRTSVAEAQDLQAAIMGYLPGYATPRIVCDVP-YVGKRWVHQVV 394 Query: 325 HNIKKVGNGSYCITDHHNIVHD 346 +++G SY ++ + Sbjct: 395 EYDRELGV-SYWTKNYRTGIES 415 >gi|271498600|ref|YP_003331625.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii Ech586] gi|270342155|gb|ACZ74920.1| lysine 2,3-aminomutase YodO family protein [Dickeya dadantii Ech586] Length = 386 Score = 284 bits (728), Expect = 1e-74, Method: Composition-based stats. Identities = 94/363 (25%), Positives = 157/363 (43%), Gaps = 21/363 (5%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNP----NDPI 56 Q ++ E I + +TP ANLI ++P+ Sbjct: 24 WQQKNAIRDEPALRAACGGWSDEIAQRITHNLASRKMQITPYYANLIKDAGYKNIVDNPL 83 Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCF-- 113 RQ +P + + E + +H H+Y +R++L++++ C YC+FCF Sbjct: 84 WRQVVPFWLDDGATGYDGESENWELSHEMKTPICQHKYDNRVILRMVNTCNSYCQFCFEA 143 Query: 114 -RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 R V S+K K + +L YI+ + EVI +GGDP++L+ +L + L +R I Sbjct: 144 LRTLKVDSEKENA-GRKAFQDSLNYIRNTPGVEEVILSGGDPMMLTDVKLDECLGAIRNI 202 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 + ++R HSR +P RI L+ L+ +H HP E S+ A+ R+ Sbjct: 203 RDSLLIRIHSRSLTFNPYRITDTLLDILRRHRVN-AFGVHVCHPLELSDAFRDAVKRIQQ 261 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEGQ 291 I+ S LL+G+ND+ + L L + +KPYYL+H + G S ++ +I + Sbjct: 262 VVPIVFSNMPLLRGVNDNEDTLRQLFIELYRMGVKPYYLYHFMPFSPGASEYKASIRDAI 321 Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHHNI 343 I+ LK ++S + P Y+ LP GK V + G Y T+ Sbjct: 322 AIMNRLKRRVSNIALPEYV--LPHAKGKFTVPLLSSVQDMPQFEDIDGERFYRFTNWQGD 379 Query: 344 VHD 346 V Sbjct: 380 VCR 382 >gi|302867587|ref|YP_003836224.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029] gi|315506013|ref|YP_004084900.1| lysine 2,3-aminomutase [Micromonospora sp. L5] gi|302570446|gb|ADL46648.1| Lysine 2,3-aminomutase [Micromonospora aurantiaca ATCC 27029] gi|315412632|gb|ADU10749.1| Lysine 2,3-aminomutase [Micromonospora sp. L5] Length = 468 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 81/380 (21%), Positives = 156/380 (41%), Gaps = 36/380 (9%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQ-----IDEIKEISNHYSIALTPVIANLINPHNP--- 52 Q R + + + L ++ ++ ++ S+ + P + N + PH P Sbjct: 58 WQ-RVNCVKNIKQLRAVLGDTVDETFYADLEADQKALATMSMLVPPQMLNTMVPHQPMST 116 Query: 53 ----NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 DPI R IP + P D + +++ +G+ HRYP ++L +LL Sbjct: 117 EALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLST 176 Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157 CP YC C R ++VG+ V K +A + Y++ + +V+ +GGD + Sbjct: 177 CPQYCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHITYLKAHPGVRDVVVSGGDVANV 236 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGKPVYI 209 + L+ L L I+ ++ +R ++ + PQ P++++ L G + I Sbjct: 237 PWRNLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDVVEGLERVARTAARRGVNLAI 296 Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267 H NH + A + G+ + +Q VL++G+N L +L E I Sbjct: 297 HTHVNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVNATSADLLDLCFALQGEAGIL 356 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHN 326 PYY + D+ H+R+ + Q++ + + G P + D+P GK + + Sbjct: 357 PYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMLTD 415 Query: 327 IKKVGNGSYCITDHHNIVHD 346 + SY ++ + Sbjct: 416 YDRERGISYWTKNYRTSIES 435 >gi|302340485|ref|YP_003805691.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM 11293] gi|301637670|gb|ADK83097.1| radical SAM domain-containing protein [Spirochaeta smaragdinae DSM 11293] Length = 461 Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats. Identities = 77/386 (19%), Positives = 151/386 (39%), Gaps = 52/386 (13%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + R + + + + K Q+ E++ ++ + LI+ P DP+ + Sbjct: 5 RFRPYSAANIDSITQLKRLPKSQLREMQAVAKILPFRTNNYVVEELIDWSRIPEDPLFQL 64 Query: 60 FIPQKEE----------------------------------LNILPEERED-PIGDNNHS 84 PQ + +N P + + + Sbjct: 65 TFPQPQMLHKSDLRRITELLATETGYSPEQLKSEQYRIRTAMNPHPAGQLQLNVPEEEGE 124 Query: 85 PLKGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 L G+ H+Y + +L C YC +CFR K ++S + E + Y+ Sbjct: 125 VLHGMQHKYDETVLFFPKQGQTCHAYCTYCFRWAQFIGNKELQMASGEVEPLIRYLDRHP 184 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK--HVQILRFHSRVPIVDPQRINPE----- 195 ++ +++ TGGDP+ + L++ ++ L + ++Q +R ++ P R + Sbjct: 185 EVSDLLITGGDPMFMRSSVLRRYIEPLLRHRPGNLQTIRIGTKSLSYWPYRYLSDKDSDD 244 Query: 196 ---LIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 L + AG + I H H E + AAI R+ G I+ QS +++ INDD Sbjct: 245 LISLFHEITTAGYHLSIMAHFTHIRELSTLAVEAAIRRIKETGAIIRCQSPIVRHINDDA 304 Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 + A + R V+L + PYY+ ++F + I E K+ + ++SGL + Sbjct: 305 SMWAEMWRREVQLGMIPYYMFIARDTGPKAYFDIPIAETLKLFSDAYRQVSGLARTVRGP 364 Query: 312 DLPGGYGKVKIDTHNIKKVGNGSYCI 337 + GK+ +D I ++ Y + Sbjct: 365 SMSAKPGKILVD--GITEIEGEKYFV 388 >gi|134045650|ref|YP_001097136.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5] gi|150403695|ref|YP_001330989.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C7] gi|132663275|gb|ABO34921.1| L-lysine 2,3-aminomutase [Methanococcus maripaludis C5] gi|150034725|gb|ABR66838.1| lysine 2,3-aminomutase YodO family protein [Methanococcus maripaludis C7] Length = 594 Score = 283 bits (726), Expect = 2e-74, Method: Composition-based stats. Identities = 85/359 (23%), Positives = 152/359 (42%), Gaps = 30/359 (8%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEI-SNHYSIALTPVIANLINPH---NPNDPI 56 QL + + S + L N + + + I++ N+ +TP +L++ + + Sbjct: 195 WQLENVVINS-KTLENLVALSVSEKNAIEKARQNNIPFGITPYYVSLMDNTTDRKYDHAV 253 Query: 57 ARQFIPQKEELNILP-----EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111 Q IP + E D +G+ + SP+ + RYP ++K C C + Sbjct: 254 RAQVIPPLNYVEKTAEARNSGESLDFMGETDTSPVDLVTRRYPMIAIMKPYETCAQICVY 313 Query: 112 CFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 C R + K + + E A+ + + I EV+ TGGDP ILS + L +L Sbjct: 314 CQRNWQIKDVFSKNALAKKESVENAIEWFRNNESIKEVLLTGGDPGILSEEYLAYLLSEF 373 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIA 225 IKH++ +R +R P+V PQRI E + L +P V ++ H H YE +++ Sbjct: 374 SEIKHLERIRIGTRTPVVLPQRITDEFTEVLGHYNEPGIREVAVSTHIEHVYEVTKDLKD 433 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 A+S+L N GI + +Q V + E + L + + I+PYYL + T ++R+ Sbjct: 434 AVSKLKNNGIYVYNQQVFTVENSRRFET-SALRKALKLVGIEPYYLFNTKGKEETVNYRV 492 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 I + + G C + N+ K+G + H+++ Sbjct: 493 PIARALQERKEEARLLPGYC-------------RTDSTVFNVPKLGKNNLNFYQDHDLI 538 >gi|107027427|ref|YP_624938.1| hypothetical protein Bcen_5091 [Burkholderia cenocepacia AU 1054] gi|116693862|ref|YP_839395.1| lysine 2,3-aminomutase YodO family protein [Burkholderia cenocepacia HI2424] gi|105896801|gb|ABF79965.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia AU 1054] gi|116651862|gb|ABK12502.1| L-lysine 2,3-aminomutase [Burkholderia cenocepacia HI2424] Length = 396 Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats. Identities = 98/366 (26%), Positives = 162/366 (44%), Gaps = 24/366 (6%) Query: 1 MQLRHKTLTSAQDLYNA-NLIKKEQIDEIKEISNHYSIALTPVIANLI-------NPHNP 52 Q R+ T+ L A E I+ N + +TP LI + Sbjct: 31 WQQRN-TIREEASLREACGGWSDELSSHIQSNLNGRKLQITPYYLRLIRESQGDTDADIV 89 Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRF 111 +P+ RQ +P + + + E + H H+Y +R++L++++ C YC+F Sbjct: 90 RNPLWRQVVPFWSDEIVGGYDGESENWELAHEMKTPICQHKYDNRVILRMVNTCNSYCQF 149 Query: 112 CFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 CF R + + + T S ++AYI++ I EVI +GGDPL+LS +L + L L Sbjct: 150 CFEALRTLEVNSEKTNASRDTFGESVAYIKQNPAIEEVILSGGDPLMLSDAKLDEHLSAL 209 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 R + ++R HSR +P R+ +L+ L+ +H HP E S A+ R Sbjct: 210 RDVGRDLLIRIHSRSLTFNPYRVTDQLVAMLERHRVN-AFGVHVCHPDELSPAFTDAVKR 268 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIE 288 + +A I+ S L+GINDD E L L +KPYYL+H + G S ++ +I Sbjct: 269 IRSAVPIVFSNMPFLRGINDDEETLHRLFIELYRRGVKPYYLYHFMPFSPGASVYKASIR 328 Query: 289 EGQKIVASLKEKISGLCQPFYILDLPGGYGK--VKID------THNIKKVGNGSYCITDH 340 + +I+ LK ++S + P Y+ LP GK V + ++ Y + Sbjct: 329 DAIRIMNRLKRRVSNVAMPEYV--LPHAKGKFTVPLFEGQGDIPQFVETGEQRIYRFVNW 386 Query: 341 HNIVHD 346 D Sbjct: 387 QGETCD 392 >gi|148255106|ref|YP_001239691.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1] gi|146407279|gb|ABQ35785.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1] Length = 460 Score = 283 bits (724), Expect = 4e-74, Method: Composition-based stats. Identities = 81/367 (22%), Positives = 148/367 (40%), Gaps = 46/367 (12%) Query: 3 LRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQF 60 L+ L L I + +++ + + + + LI+ P+ DP R Sbjct: 29 LKLYGLQHIDILRRYRDIPDRALHDMRVVGQVLPFRVNNYVLDELIDWAEPDEDPFYRLT 88 Query: 61 IPQKEEL------------------------------NILPE-EREDPIGDNNHSPLKGI 89 + + L N P + + + S + G+ Sbjct: 89 MLDRHMLDPADFDALERALRVGGSAPVEVTAAIHRRFNPHPGRQMTMNMPELGGSGVSGL 148 Query: 90 VHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 H+Y + L+ C YC FCFR + +++ +++ +AYI+E +I +V Sbjct: 149 QHKYAETCLVFPASGQTCAAYCSFCFRWPQFIGNRDLRMATDESQRFVAYIKEHKEISDV 208 Query: 148 IFTGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELI-------- 197 + TGGDPLI+ L++ L L + HV +R +++ P R + Sbjct: 209 LLTGGDPLIMRASVLRRYLLPLLGADLAHVTTIRIGTKMLGFWPYRFTTDDDADDLIALL 268 Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 + + +G+ + I +H +HP E + A A+ RL + G +L SQS +++G+NDD I Sbjct: 269 EEVVRSGRHLAIMLHISHPRELETAAARRAVQRLLSTGAVLRSQSPVVRGVNDDARIWQE 328 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 L V I PYY+ + F + + +I ++SGL + + Sbjct: 329 LWSREVRQGIVPYYMFVLRDTGPRAFFEVPLARALEIYRGGIRQVSGLARSARGPIMSTD 388 Query: 317 YGKVKID 323 GKV +D Sbjct: 389 MGKVAVD 395 >gi|284031530|ref|YP_003381461.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM 17836] gi|283810823|gb|ADB32662.1| lysine 2,3-aminomutase YodO family protein [Kribbella flavida DSM 17836] Length = 490 Score = 281 bits (721), Expect = 8e-74, Method: Composition-based stats. Identities = 79/386 (20%), Positives = 168/386 (43%), Gaps = 37/386 (9%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEI---KEISNHYSIALTPVIANLINPHNPND- 54 Q R + + + L + L+++ +++ + S+ L P + N I P D Sbjct: 54 WQ-RSHCVKNVKQLRDVMGDLLEERVYEDLTRDQAERATMSMLLPPQMLNTIVPQGAADY 112 Query: 55 -------PIARQFIPQ----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103 P+ R +P + + P D + ++ +G+ HRYP ++L ++L Sbjct: 113 TEAFYADPVRRYMLPMFTDRRTDWPSHPHATRDSLHEHEMWATEGLTHRYPTKVLAEVLP 172 Query: 104 VCPVYCRFCFRREMVGSQKG-------TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 CP YC C R ++VG+ T+ + + L Y++ + +V+ +GGD Sbjct: 173 TCPQYCGHCTRMDLVGNSTPVIDKLKFTIKPQQRLDDMLDYLRRTPGVRDVVVSGGDVAN 232 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ--------CLKEAGKPVY 208 + RL+ L +L I++++ +R ++ + PQ + ++ ++ G V Sbjct: 233 MPWPRLEAFLTSLLEIENIRDIRLATKALMGMPQHWLSDDVRAGVERVATIARQRGVMVA 292 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRI 266 + H N + A + +AG+ + +Q VL++G+ND L +L ++ I Sbjct: 293 MHTHVNAAQSVTPLVAEATKAMFDAGLRDVRNQGVLMRGVNDSVPQLLDLCFALLDGATI 352 Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTH 325 PYY + D+ + H+R+++++ Q + + + G P + D+P GK + Sbjct: 353 TPYYFYMCDMIPFSEHWRVSVKDAQHLQHGILGYLPGFATPRIVCDVP-YVGKRWVHQLS 411 Query: 326 NIKKVGNGSYCITDHHNIVHDYPPKS 351 + +V SY ++ + P++ Sbjct: 412 DYDEVRGISYWKKNYRTGIEQQDPEA 437 >gi|90423562|ref|YP_531932.1| radical SAM family protein [Rhodopseudomonas palustris BisB18] gi|90105576|gb|ABD87613.1| L-lysine 2,3-aminomutase [Rhodopseudomonas palustris BisB18] Length = 480 Score = 281 bits (721), Expect = 9e-74, Method: Composition-based stats. Identities = 77/361 (21%), Positives = 149/361 (41%), Gaps = 48/361 (13%) Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQKEEL 67 + +L + + EI ++ + NLI+ P+DPI + PQ+ L Sbjct: 22 NLSELPEWQRLDAQLRREIDIVARVLPFRTNRYVVENLIDWSRVPDDPIFQLVFPQRGML 81 Query: 68 NILPEEREDPIGDNNH---------------------------------SPLKGIVHRYP 94 + + + + +++ PL G+ H+Y Sbjct: 82 SEVDFDDVRTLVESSDDSEALARAVERIRRRLNPHPGGQLTHNTATLAGRPLPGVQHKYR 141 Query: 95 DRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 + ++ C YC +CFR +G + ++ T +AY++ +I +V+ TGG Sbjct: 142 ETVVFFPAQGQTCHAYCTYCFRWAQFVGMQGMRIETRSTSELVAYLRAHPEITDVLITGG 201 Query: 153 DPLILSHKRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKE 202 DP+I++ + L++ ++ L + H+Q +R ++ P R + L + + Sbjct: 202 DPMIMATRTLRRYIEPLLVPELSHIQNIRIGTKSVAYWPHRFVSDADADDCLRLFEEVAA 261 Query: 203 AGKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 A + + I H HP E A AI R+ + G + Q+ L++ +ND PE+ + L RT Sbjct: 262 ANRHLAIMGHYTHPVELHPALAREAIRRIRDTGAQIRMQAPLIRHVNDAPELWSELWRTG 321 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 V L + PYY+ +F + + +I +SGL + + GK++ Sbjct: 322 VRLGLIPYYMFIERDTGPRDYFSVPLVRAHEIFRRAAANVSGLARAAQGPTMSVLPGKIR 381 Query: 322 I 322 I Sbjct: 382 I 382 >gi|302531882|ref|ZP_07284224.1| lysine 2,3-aminomutase [Streptomyces sp. AA4] gi|302440777|gb|EFL12593.1| lysine 2,3-aminomutase [Streptomyces sp. AA4] Length = 460 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 72/358 (20%), Positives = 149/358 (41%), Gaps = 48/358 (13%) Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL---- 67 + + + +I +S+ + + + LI+ P+DPI R P K+ L Sbjct: 44 IPQVRSLGPDIRRDISVVSSVLPFKVNNYVVDELIDWSAVPDDPIFRLTFPHKDMLPADM 103 Query: 68 ----------------------------NILPEER-EDPIGDNNHSPLKGIVHRYPDRIL 98 N P ++ + + ++G+ H+Y + +L Sbjct: 104 YDEVAALQARGLRPAELRRAVAPMRERLNPHPGDQLTKNVPQDGSGVVRGLQHKYAETVL 163 Query: 99 LKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + H C YC +CFR G D + + Y++ ++ +V+FTGGDP+I Sbjct: 164 VFPSHGQTCHAYCGYCFRWAQFVGMPGLKQQVDDNDRIVDYLRSHREVSDVLFTGGDPMI 223 Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PELIQCLKE---AGKP 206 ++ L++ ++ L +H++ RF ++ P R +L++ ++ +G+ Sbjct: 224 MTTDVLRQYVEPLLGPGFEHLRNFRFGTKALSYWPYRFTTDPDSDDLLRLFEQIVGSGRH 283 Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 V + H +H E ++ A+ R+ + G ++ Q+ +++ +ND+ A + R V L Sbjct: 284 VAVMAHFSHARELGTDAVARAMRRIRDTGAVVRVQAPIVRHVNDNAPAWAEMWRQSVRLG 343 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 PYY+ +F L + + I +++SGL + + GKV +D Sbjct: 344 AVPYYMFVERDTGAREYFALPLAQVVDIYRDAFKQVSGLERTARGPVMSASPGKVALD 401 >gi|288916751|ref|ZP_06411125.1| conserved hypothetical protein [Frankia sp. EUN1f] gi|288351825|gb|EFC86028.1| conserved hypothetical protein [Frankia sp. EUN1f] Length = 457 Score = 281 bits (719), Expect = 1e-73, Method: Composition-based stats. Identities = 76/372 (20%), Positives = 153/372 (41%), Gaps = 52/372 (13%) Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEEL---- 67 L A L +++ + ++ + + + LI+ P+DPI R PQ + L Sbjct: 28 LERAGLAGPDRL-MARAVAAVLPFRVNDYVVDALIDWDAAPDDPIYRLVFPQPDMLPAEQ 86 Query: 68 ----------------------------NILP-EEREDPIGDNNHSPLKGIVHRYPDRIL 98 N P +RE + + + L G+ H+YP+ +L Sbjct: 87 VAPIAQLLARGAPTREVQAAAAAVRAALNPHPAGQRELNVPELAGTRLDGLQHKYPETVL 146 Query: 99 LKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 C YC +CFR + ++S++ + + Y++ ++ +V+ TGGDP++ Sbjct: 147 YFPAHGQTCHAYCTYCFRWAQFVQEPHLRMASRNVDDLVTYVRAHPEVTDVLITGGDPMV 206 Query: 157 LSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGK 205 +S + L + + L H+Q +R ++ P R L + + +G+ Sbjct: 207 MSAEMLARCVLPLLDEPGLGHLQSIRIGTKSLSYWPARFVTDPGADDTLRLFERVVASGR 266 Query: 206 PVYIAIHANHPYEFSEEAIA-AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 + + H +HP E + A+ R+ + G ++ +Q +++ +NDD A + + V L Sbjct: 267 SLALMAHYSHPRELETDVAEHAVRRVLSTGAVIRTQGPVIRSVNDDAGAWAAMWQRQVRL 326 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 + PYY+ +F + + +I ++ +SGL + + GKV +D Sbjct: 327 GMVPYYMFVERDTGPRGYFEVALLRAYEIFSAAYRSVSGLARTVRGPVMSATPGKVVVD- 385 Query: 325 HNIKKVGNGSYC 336 + VG Y Sbjct: 386 -GVHTVGAEKYI 396 >gi|300786612|ref|YP_003766903.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32] gi|299796126|gb|ADJ46501.1| lysine 2,3-aminomutase [Amycolatopsis mediterranei U32] Length = 456 Score = 280 bits (718), Expect = 2e-73, Method: Composition-based stats. Identities = 90/390 (23%), Positives = 170/390 (43%), Gaps = 42/390 (10%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEI---KEISNHYSIALTPVIANLINPH---NP 52 Q R + +A+ L L+++ D++ + S+ L P + N + P +P Sbjct: 42 WQ-RVHCVRNAKQLRALMGDLLEERFYDDLLADQRELATMSMLLPPQMLNTMAPTAGTDP 100 Query: 53 N--------DPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100 DPI R +P + + P D + + ++G+ HRYP ++L + Sbjct: 101 AKVTEAFYADPIRRYMLPVRSDRDATWPSHPHSERDSLHEAEMWVVEGLTHRYPTKVLAE 160 Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGD 153 ++ CP YC C R ++VG+ TV K +A +AY+++ + +V+ +GGD Sbjct: 161 MISTCPQYCGHCTRMDLVGNSTETVEKHKLTLKPVDRQDAMIAYLKKTPGVRDVVVSGGD 220 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGK 205 + +L+ L L I V+ +R ++ PQ P++++ L + G Sbjct: 221 VANVPWPQLESFLMRLMDIDTVRDIRLATKALAALPQHWLQPKVVEGLERVAVTAQRRGV 280 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-E 263 + I H NH + A N G+ + +Q VL++G+N P L +L E Sbjct: 281 NLAIHTHVNHAQSVTPLVAEAAQTALNVGVRDVRNQGVLMRGVNATPAALLDLCFALQGE 340 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 I PYY + D+ H+R+++ E Q++ S+ + G P + D+P GK + Sbjct: 341 ANILPYYFYMCDMIPNAEHWRVSVWEAQELQHSIMGYLPGYATPRIVCDVP-YVGKRWVH 399 Query: 324 --THNIKKVGNGSYCITDHHNIVHDYPPKS 351 +++G SY ++ + P++ Sbjct: 400 QLAEYDRELGI-SYWTKNYRTGIEHSDPEA 428 >gi|330468030|ref|YP_004405773.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032] gi|328811001|gb|AEB45173.1| Lysine 2,3-aminomutase [Verrucosispora maris AB-18-032] Length = 467 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 80/375 (21%), Positives = 153/375 (40%), Gaps = 36/375 (9%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQ-----IDEIKEISNHYSIALTPVIANLINPHNP--- 52 Q R + + + L ++ ++ + S+ + P + N + P P Sbjct: 57 WQ-RVNCVKNVKQLRTVLGDTVDESFYADLEADQRAMATMSMLVPPQMINTMVPFAPPST 115 Query: 53 ----NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 DPI R IP + P D + +++ +G+ HRYP ++L +LL Sbjct: 116 EALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLAT 175 Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157 CP YC C R ++VG+ V K +A + Y++ + +V+ +GGD + Sbjct: 176 CPQYCGHCTRMDLVGNSTPAVDKLKLSLKPVDRYDAHITYLKAHPGVRDVVVSGGDVANV 235 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGKPVYI 209 + L+ L L I+ ++ +R ++ + PQ P++++ L G + I Sbjct: 236 PWRNLESYLMRLLEIETIRDIRLATKALMGLPQHWLQPDVVEGLERVARTAARRGVNLAI 295 Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267 H NH + A + G+ + +Q VL++G+N + L +L E I Sbjct: 296 HTHVNHAQSLTPLVAKAAQTALDVGVRDVRNQGVLMRGVNATSKDLLDLCFGLQGEAGIL 355 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHN 326 PYY + D+ H+R+ + Q++ + + G P + D+P GK + Sbjct: 356 PYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMVTE 414 Query: 327 IKKVGNGSYCITDHH 341 + SY ++ Sbjct: 415 YDRERGISYWTKNYR 429 >gi|256376813|ref|YP_003100473.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827] gi|255921116|gb|ACU36627.1| L-lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827] Length = 450 Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats. Identities = 77/367 (20%), Positives = 149/367 (40%), Gaps = 45/367 (12%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQ 59 + R ++ + + ++ ++ IS + + + LI+ PNDPI + Sbjct: 13 RFRSLGPHHVDEVAARYAPRADLMEAVRVISQVLPFRVNEYVLSHLIDWARVPNDPIFQL 72 Query: 60 FIPQKEELNILPE-ERED------------------------PIGDN-------NHSPLK 87 PQ+ L E E D P G + L Sbjct: 73 VFPQRGMLAEDDERELADLLRAKDKRGLRLAVERVRGGLNPHPAGQKELNVPMLDGEVLP 132 Query: 88 GIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 G+ H+Y + L C YC +CFR ++ E + Y+++ + Sbjct: 133 GVQHKYRETALYFPQQGQTCHAYCTYCFRWAQFVGDADLRFAAPGPELLVRYLRQHPAVT 192 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LI 197 +V+ TGGDP+I+S +RL+ L+ L + V+ +R ++ P R + L Sbjct: 193 DVLVTGGDPMIMSTERLRSHLEPLLAVDTVRTIRIGTKSVAYWPHRFTTDPDADEVLRLF 252 Query: 198 QCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 + + +G+ + + H +HP E +++A AA++R+ G ++ Q+ L+K +NDD + A+ Sbjct: 253 ERVVASGRSLAVMAHFSHPRELETDQARAALARIRATGAVVYCQAPLIKHVNDDSRVWAD 312 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGG 316 + R + + PYY+ +F++ + I + GL + + Sbjct: 313 MWRGELSAGLVPYYMFVERDTGPREYFKVPLARAVDIFQGAYRTLPGLARTVRGPSMSAT 372 Query: 317 YGKVKID 323 GKV +D Sbjct: 373 PGKVLVD 379 >gi|330003195|ref|ZP_08304561.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3] gi|328537036|gb|EGF63321.1| putative lysine-2,3-aminomutase protein [Klebsiella sp. MS 92-3] Length = 195 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 71/190 (37%), Positives = 104/190 (54%) Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 + YI Q+ E+IF+GGDPL+ L ++ L I HV+ LR HSR+PIV P RI Sbjct: 1 MDYIAAHPQLDEIIFSGGDPLMAKDHELDWLMTQLEAIPHVKRLRIHSRLPIVIPARITE 60 Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 L + + V + H NH E E AA++ L AG+ LL+QSVLL+G+ND+ + L Sbjct: 61 TLASRFQRSSLQVILVNHVNHANEIDGEFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTL 120 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 A+L + + PYYLH D G +HF ++ +E ++I+ L ISG P ++ Sbjct: 121 ADLSNALFDAGVMPYYLHVLDRVQGAAHFMVSDDEAREIMRELLTLISGYMVPKLAREIG 180 Query: 315 GGYGKVKIDT 324 G K +D Sbjct: 181 GEPSKTPLDL 190 >gi|145594793|ref|YP_001159090.1| radical SAM domain-containing protein [Salinispora tropica CNB-440] gi|145304130|gb|ABP54712.1| L-lysine 2,3-aminomutase [Salinispora tropica CNB-440] Length = 491 Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats. Identities = 82/376 (21%), Positives = 156/376 (41%), Gaps = 38/376 (10%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKK---EQIDEIKEISNHYSIALTPVIANLINPHN---- 51 Q + + + + L L+ + ++ ++ S+ +TP + N + P Sbjct: 81 WQRTN-CVKNIKQLRTVLGDLVSETFYADLEADQKALATMSMLVTPQMLNTMVPFESMST 139 Query: 52 ---PNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 DPI R IP + P D + +++ +G+ HRYP ++L +LL Sbjct: 140 DALYADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLST 199 Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157 CP YC C R ++VG+ + K +A ++Y++ + +V+ +GGD + Sbjct: 200 CPQYCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHISYLKAHPGVRDVVVSGGDVANV 259 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PELIQCL-------KEAGKPVYI 209 K L+ L L I V+ +R ++ + PQ ++++ L G + I Sbjct: 260 PWKNLETYLMRLLDIDTVRDIRLATKALMGLPQHWLRADVVEGLERVARTAARRGVNLAI 319 Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267 H NH + A + G+ + +Q VL++G+N L +L E I Sbjct: 320 HTHVNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVNATTPDLLDLCFALQGEAGIL 379 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--TH 325 PYY + D+ H+R+ + Q++ + + G P + D+P GK + T Sbjct: 380 PYYFYMCDMIPNAEHWRVPVGHAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMLTE 438 Query: 326 NIKKVGNGSYCITDHH 341 ++ G SY ++ Sbjct: 439 YDQERGI-SYWTKNYR 453 >gi|218508047|ref|ZP_03505925.1| L-lysine 2,3-aminomutase protein [Rhizobium etli Brasil 5] Length = 198 Score = 279 bits (715), Expect = 4e-73, Method: Composition-based stats. Identities = 117/198 (59%), Positives = 157/198 (79%) Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+LS +RL+++++ L I HV+I+RFH+RVP+VDP++I+ LI LK +GK VY+A+HA Sbjct: 1 PLVLSPRRLREIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHA 60 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 NHP E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHH Sbjct: 61 NHPRELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHH 120 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG 333 PDLA GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK I I+ G+G Sbjct: 121 PDLAPGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVISESVIRATGDG 180 Query: 334 SYCITDHHNIVHDYPPKS 351 Y ++D+ H YPP Sbjct: 181 CYSVSDYRGGEHSYPPAG 198 >gi|150399938|ref|YP_001323705.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii SB] gi|150012641|gb|ABR55093.1| lysine 2,3-aminomutase YodO family protein [Methanococcus vannielii SB] Length = 594 Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats. Identities = 87/359 (24%), Positives = 157/359 (43%), Gaps = 30/359 (8%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEI-SNHYSIALTPVIANLINP--HNPND-PI 56 +++ +T ++ L N + + + I++ N+ +TP +L++ ND + Sbjct: 195 WHIKN-IVTDSKTLENLVRVSELEKYSIEKARENNIPFGITPYYVSLMDNSLDRRNDHAV 253 Query: 57 ARQFIPQKEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111 Q IP + E R D +G+++ SP+ + RYP ++K C C + Sbjct: 254 RAQVIPPVRYVEKTIEARSSGKNLDFMGESDTSPVDLVTRRYPMIAIMKPYETCAQICVY 313 Query: 112 CFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 C R + + S + A+ + E I E++ TGGDP ILS++ L +L Sbjct: 314 CQRNWQIKDVFSDNVLASKESVNNAINWFNENECIKELLLTGGDPAILSNEYLDYLLSEF 373 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIA 225 IKH++ +R +R P+ PQRI E + L + KP + I+ H H YE + + Sbjct: 374 SKIKHLERIRIGTRTPVALPQRITNEFSEILGKYNKPGVREIAISTHVEHVYEVTADLRD 433 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 AISRL N+GI + +Q V + E + L + + I+PYYL + T+++R+ Sbjct: 434 AISRLKNSGITVYNQQVFTIENSRRFET-SALRKVLKLIGIEPYYLFNTKGKEETTNYRV 492 Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIV 344 I + + G C + N+ K+G + H+++ Sbjct: 493 PIARALQERKEEARLLPGYC-------------RTDSTVFNVPKLGKNNLNFYQDHDVI 538 >gi|224007663|ref|XP_002292791.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana CCMP1335] gi|220971653|gb|EED89987.1| hypothetical protein THAPSDRAFT_24127 [Thalassiosira pseudonana CCMP1335] Length = 533 Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats. Identities = 78/347 (22%), Positives = 141/347 (40%), Gaps = 50/347 (14%) Query: 27 EIKEISNHYSIALTPVIAN-LINPHNPN---DPIARQFIPQKEELNI-------LPEERE 75 ++K + +P + LI+ + + DP R P + L+ E Sbjct: 121 DVKLAGMVFPFKASPYYVDELIDWESEDVRQDPFYRLVFPTLDMLSDEHRMKLEAAYEEG 180 Query: 76 DP-----------------------IGDNNHSPLKGIVHRYPDRILLKLL--HVCPVYCR 110 DP + L G+ H+Y + +L+ C YC Sbjct: 181 DPKNLIRTVEEIRSDLNPHPAGQKTLNAPKDDSLTGVQHKYSETVLVFPSAGQTCHAYCT 240 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +CFR + K+ ++ Y+ + ++ +++ TGGDP+++ K L + L+ L Sbjct: 241 YCFRWAQFIGDDELRFAQKEAKSLFDYLSKHEEVSDILMTGGDPMVMKTKSLARYLEPLT 300 Query: 171 Y---IKHVQILRFHSRVPIVDPQRIN-----PELIQCLK----EAGKPVYIAIHANHPYE 218 + H++ +R +R PQR E+I+ L+ E G+ V + H +H E Sbjct: 301 DPNFLPHIKNIRIGTRSLSFWPQRFTTDDDADEVIELLRRVREEGGRHVAVMAHLSHARE 360 Query: 219 F-SEEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 +++ AAI R+ A + SQS +++GIND ++ A RT V + I PYY+ Sbjct: 361 LSTDKVKAAIQRIQKEAFATIRSQSPVMRGINDSSDVWAEKWRTEVNMGIIPYYMFLARD 420 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 F + + KI + SGL + + GKV++ Sbjct: 421 TGAQQFFDVPMATAHKIYSDALRNCSGLIRTARGPSMSCTPGKVEVT 467 >gi|291301420|ref|YP_003512698.1| lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728] gi|290570640|gb|ADD43605.1| Lysine 2,3-aminomutase [Stackebrandtia nassauensis DSM 44728] Length = 475 Score = 278 bits (713), Expect = 7e-73, Method: Composition-based stats. Identities = 89/396 (22%), Positives = 162/396 (40%), Gaps = 50/396 (12%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNH---YSIALTPVIANLINPH----N 51 Q R + + L + D++ + S+ L P + N I P Sbjct: 41 WQ-RVHCVKNVAQLRGVLGDRVDDAFYDDLAADGDKRATMSMLLPPQMLNTIAPTLETTA 99 Query: 52 P--------NDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILL 99 P DPI R +P ++ + P D + +++ +G+ HRYP ++L Sbjct: 100 PGSWTEAYYADPIRRYMLPVFSDRRTDWPSHPHATRDSLHEHDMWVAEGLTHRYPTKVLA 159 Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLS-------SKDTEAALAYIQEKSQIWEVIFTGG 152 +LL CP YC C R ++VG+ T+ +A + Y+Q + +V+ +GG Sbjct: 160 ELLSTCPQYCGHCTRMDLVGNSTPTIDKLKLKLKPMARYDAMIEYLQSHPGVRDVVVSGG 219 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAG 204 D + K L+ + L I+ ++ +R ++ + PQ + + +E G Sbjct: 220 DVANVPWKNLENFISRLLEIESIRDIRLATKALMGLPQHWLQDDVVDGMGRVATVARERG 279 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV- 262 + I H NH + A + +AG+ + +Q VL+ G+N+ PE L +L Sbjct: 280 VNLAIHTHVNHVQSLTPTVARAARAMLDAGVRDVRNQGVLMNGVNNSPEALLDLCFALQG 339 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 E I PYY + D+ + H+R ++ E Q + ++ + G P I D+P GK + Sbjct: 340 EANILPYYFYMCDMIPNSEHWRTSVSEAQALQTAIMGYLPGYATPRIICDVP-FVGKRWV 398 Query: 323 DTHNIKKVGNG-SYCITDHHNIV---------HDYP 348 +G SY ++ + +YP Sbjct: 399 HQVGRYDAEHGISYWTKNYRTSIEAADPDALTREYP 434 >gi|302527347|ref|ZP_07279689.1| CmnP protein [Streptomyces sp. AA4] gi|302436242|gb|EFL08058.1| CmnP protein [Streptomyces sp. AA4] Length = 463 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 87/391 (22%), Positives = 162/391 (41%), Gaps = 45/391 (11%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEI---KEISNHYSIALTPVIANLINPH---NP 52 Q R + + + L L++ +++ + S+ L P + N + PH +P Sbjct: 49 WQ-RVHCVRNVKQLRALMGDLLEDRFYEDLLADQREMATMSMLLPPQMINTMAPHAGTDP 107 Query: 53 N--------DPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100 DPI R +P + + + P D + + ++G+ HRYP ++L + Sbjct: 108 AKVTEAFYADPIRRYMLPVRSDRHPAWPSHPHAERDSLHEAEMWVVEGLTHRYPTKVLAE 167 Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGD 153 ++ CP YC C R ++VG+ + K +A Y++ + +V+ +GGD Sbjct: 168 MISTCPQYCGHCTRMDLVGNSTEQIEKHKLALKPVDRQDAMTDYLKRTPGVRDVVVSGGD 227 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-----INPELIQCL---KEAGK 205 + +L+ L L I+ V+ +R ++ PQ + L + + G Sbjct: 228 VANVPWPQLESFLMRLMDIETVRDIRLATKALAALPQHWLQPKVTEGLQRVALTAQARGV 287 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-E 263 + I H NH + A G+ + +Q VL++G+ND P L +L E Sbjct: 288 NLAIHTHVNHAQSVTPLVAEAARTALQVGVRDVRNQGVLMRGVNDTPAALLDLCFALQGE 347 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 I PYY + D+ H+R+ + E Q++ S+ + G P + D+P GK + Sbjct: 348 ANILPYYFYMCDMIPNAEHWRVAVWEAQELQHSIMGYLPGYATPRIVCDVP-YVGKRWV- 405 Query: 324 THNIKKVGNG---SYCITDHH-NIVHDYPPK 350 H + + SY ++ I H+ P Sbjct: 406 -HQLAEYDRDLGISYWTKNYRTGIEHEDPEA 435 >gi|325122955|gb|ADY82478.1| lysine 2,3-aminomutase [Acinetobacter calcoaceticus PHEA-2] Length = 226 Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats. Identities = 77/222 (34%), Positives = 120/222 (54%), Gaps = 2/222 (0%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 + C V+CR+CFRR + + ++D YI+ I E+I +GGDPL LS++ Sbjct: 1 MTGACAVHCRYCFRRHFPYQEN--LPKNEDWLNIKNYIEANPNINEIILSGGDPLTLSNR 58 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220 +L L+ L +K +QILR HSRVPIV P RI+ +LI LK + + + +H+NH E Sbjct: 59 KLALWLERLSSLKQIQILRIHSRVPIVIPNRIDEQLISLLKNSRLRIVLVVHSNHASELD 118 Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280 + + + +L++ I +L+Q+VLLKG+ND + L +L E R+ PYYLH D G Sbjct: 119 DFTCSKLLQLSDHHITVLNQAVLLKGVNDSAQTLIDLSYRLFEARVMPYYLHVLDKVKGA 178 Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 HF L + I + + G P + ++ G K + Sbjct: 179 QHFDLESSKIDDIYRDVLANLPGYLVPKLVREIAGEKNKTPL 220 >gi|159037977|ref|YP_001537230.1| lysine 2,3-aminomutase [Salinispora arenicola CNS-205] gi|157916812|gb|ABV98239.1| Lysine 2,3-aminomutase [Salinispora arenicola CNS-205] Length = 467 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 80/375 (21%), Positives = 153/375 (40%), Gaps = 36/375 (9%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKK---EQIDEIKEISNHYSIALTPVIANLINPHNP--- 52 Q R + + + L L+ + ++ ++ S+ + P + N + P P Sbjct: 57 WQ-RANCVKNIKQLRAVLGDLVSETFYADLEADQKALATMSMLVPPQMLNTMVPFAPMTT 115 Query: 53 ----NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 DPI R IP + P D + +++ +G+ HRYP ++L +LL Sbjct: 116 EALYADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLST 175 Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157 CP YC C R ++VG+ + K +A + Y++ + +V+ +GGD + Sbjct: 176 CPQYCGHCTRMDLVGNSTPAIDKLKLTLKPVDRYDAHITYLKAHPGVRDVVVSGGDVANV 235 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PELIQCL-------KEAGKPVYI 209 + L+ L L I+ V+ +R ++ + PQ ++++ L G + I Sbjct: 236 PWRNLESYLMRLLDIETVRDIRLATKALMGLPQHWLRADVVEGLERVARTAARRGVNLAI 295 Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-ELRIK 267 H NH + A + G+ + +Q VL++G+N L +L E I Sbjct: 296 HTHVNHAQSLTPLVAKAAQTALDIGVRDVRNQGVLMRGVNATTPDLLDLCFALQGEAGIL 355 Query: 268 PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTHN 326 PYY + D+ H+R+ + Q++ + + G P + D+P GK + Sbjct: 356 PYYFYLCDMIPNAEHWRVPVGYAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMLTE 414 Query: 327 IKKVGNGSYCITDHH 341 + SY ++ Sbjct: 415 YDRERGISYWTKNYR 429 >gi|119716886|ref|YP_923851.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614] gi|119537547|gb|ABL82164.1| L-lysine 2,3-aminomutase [Nocardioides sp. JS614] Length = 468 Score = 277 bits (710), Expect = 1e-72, Method: Composition-based stats. Identities = 85/386 (22%), Positives = 164/386 (42%), Gaps = 43/386 (11%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKE----QIDEIKEISNHYSIALTPVIANLINPHN--- 51 Q H K + ++L + +E ++ + S+ + P + N + PH Sbjct: 53 WQRAHCVKNVRQLREL--LGDLVEERFYADLERDQAERATMSMLVPPQMMNTMVPHEVPA 110 Query: 52 ---------PNDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98 DP+ IP ++ + P D + +++ +G+ HRYP ++L Sbjct: 111 GPGSLTEAFYADPVRHYMIPVFSDRRTDWPSHPHATRDSLHEHDMWVAEGLTHRYPTKVL 170 Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTG 151 +LL CP YC C R ++VG+ T+ K L Y++ Q+ +V+ +G Sbjct: 171 AELLPTCPQYCGHCTRMDLVGNSTPTIDKLKFVAKPNDRLGDMLDYLRRTPQVRDVVVSG 230 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC--------LKEA 203 GD L RL+ L L I++++ +R ++ + PQ E ++ + Sbjct: 231 GDVANLPWPRLEDFLTRLLEIENIRDIRLATKALVGLPQHWLQEDVRAGMARVAGTARSR 290 Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV 262 G + I HANH + A + + AG+ + +Q VLL G+N P+ L +L + Sbjct: 291 GVSLAIHTHANHANSITPLVADATAAMFEAGVRDVRNQGVLLNGVNAGPDALLDLCFRLL 350 Query: 263 E-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 + +I PYY + D+ + H+R+++ + Q++ + + G P + D+P GK Sbjct: 351 DGAQIMPYYFYMCDMIPFSEHWRVSVADAQRLQHHIMGYLPGFATPRIVCDVP-FVGKRW 409 Query: 322 I-DTHNIKKVGNGSYCITDHHNIVHD 346 + + SY ++ + Sbjct: 410 VHQVADYDTERGISYWTKNYRTSIET 435 >gi|94271846|ref|ZP_01292023.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] gi|93450322|gb|EAT01561.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] Length = 572 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 81/358 (22%), Positives = 141/358 (39%), Gaps = 32/358 (8%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLIN------PHNPN 53 Q++ + + L + +E+ + N +TP +L++ + Sbjct: 170 WQIK-QIIRELDPLAKLVRLTEEEKQALALARENRLPFGITPYYLSLMDDELDGRAGGRD 228 Query: 54 DPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 I Q +P L D +G+ + SP + I RYP +LK + CP C Sbjct: 229 ASIRAQVLPPLSYVQGVLATDNSASLDFMGEEDTSPFELITRRYPAICILKPFNTCPQIC 288 Query: 110 RFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 +C R + KG EAA+ +I E I EV+ TGGDPL + ++RL ++++ Sbjct: 289 VYCQRNWEIDEVMAKGAFAGWPRIEAAIQWIHEHPSIHEVLITGGDPLAMGNERLARIME 348 Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEA 223 + I ++ +R +R + P R L+ L +P V + H HPYE + + Sbjct: 349 RVAAIPTIERIRIGTRTLVTMPMRFTEGLLSLLARHRQPGRREVAVVTHVQHPYEITPDL 408 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283 A++RL GI + +Q V + E A L R + I PYY + T+ + Sbjct: 409 AEAVNRLRLRGIPVYNQLVYTFYASRRFEA-AALRRQLRLIGIDPYYTFNTKGKDETAAY 467 Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 R+ I + + GL G+ N+ + G ++ Sbjct: 468 RVPIARLIQEQQEEARLLPGL-------------GRTDEAVFNVPRQGKCYLRAREYR 512 >gi|94264369|ref|ZP_01288160.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] gi|93455198|gb|EAT05414.1| Protein of unknown function DUF160 [delta proteobacterium MLMS-1] Length = 598 Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats. Identities = 82/358 (22%), Positives = 141/358 (39%), Gaps = 32/358 (8%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLIN------PHNPN 53 Q++ + + L + +E+ + N +TP +L++ + Sbjct: 196 WQIK-QIIRELDPLDRLVRLTEEEKQALALARENRLPFGITPYYLSLMDDELDGRAGGRD 254 Query: 54 DPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 I Q +P L D +G+ + SP + I RYP +LK + CP C Sbjct: 255 ASIRAQVLPPLSYVQGVLATDNSASLDFMGEEDTSPFELITRRYPAICILKPFNTCPQIC 314 Query: 110 RFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 +C R + KG EAA+ +I E I EV+ TGGDPL + ++RL ++++ Sbjct: 315 VYCQRNWEIDEVMAKGAFAGWPRIEAAIQWIHEHPSIHEVLITGGDPLAMGNERLARIME 374 Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEA 223 + I ++ +R +R + P R L+ L +P V + H HPYE + E Sbjct: 375 RVAAIPTIERIRIGTRTLVTMPMRFTEGLLSLLARHRQPGRREVAVVTHVQHPYEITPEL 434 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283 A++RL GI + +Q V + E A L R + I PYY + T+ + Sbjct: 435 AEAVNRLRLRGIPVYNQLVYTFYASRRFEA-AALRRQLRLIGIDPYYTFNTKGKDETAAY 493 Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 R+ I + + GL G+ N+ + G ++ Sbjct: 494 RVPIARLIQEQQEEARLLPGL-------------GRTDEAVFNVPRQGKCYLRAREYR 538 >gi|326331434|ref|ZP_08197724.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium Broad-1] gi|325950690|gb|EGD42740.1| putative L-lysine 2,3-aminomutase [Nocardioidaceae bacterium Broad-1] Length = 465 Score = 276 bits (708), Expect = 2e-72, Method: Composition-based stats. Identities = 88/381 (23%), Positives = 167/381 (43%), Gaps = 42/381 (11%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKE---ISNHYSIALTPVIANLI-----NPH 50 Q R + + + L L+++ ++++ S+ + P + N + + Sbjct: 50 WQ-RVNCIKNVRQLRALMGDLLEERFYADLEKDMAERATMSMLVPPQMVNTMVVSTSSTT 108 Query: 51 NPN--------DPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL 98 +P+ DPI IP ++ + P+ D + +++ +G+ HRYP ++L Sbjct: 109 DPSEFTDAFYADPIRHYMIPVFSDRRTDWPSHPQASRDSLHEHDMWVAEGLTHRYPTKVL 168 Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTG 151 +LL CP YC C R ++VG+ + K EA L Y++ Q+ +V+ +G Sbjct: 169 AELLSTCPQYCGHCTRMDLVGNSTPVIDKLKLTGKPVDRHEAMLDYLRNTPQVRDVVVSG 228 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-LIQ-------CLKEA 203 GD L RL+ L L I +++ +R ++ I PQ E L++ +E Sbjct: 229 GDVANLPWPRLEDFLTKLMAIDNIRDIRLATKGLIGLPQHWLQEPLLEGMSRVTSIARER 288 Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV 262 G + + HANH + A L AG+ + +Q VLL G+N D L +L + Sbjct: 289 GVSLAVHTHANHANSVTPLVAEASKALMAAGVRDVRNQGVLLAGVNADSHSLLDLCFRLL 348 Query: 263 E-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 + +I PYY + D+ + H+R+++ + Q++ + + G P + D+P GK Sbjct: 349 DGAQIMPYYFYMCDMIPFSEHWRVSVADAQRMQHDIMGYLPGFATPRIVCDVP-FVGKRW 407 Query: 322 I-DTHNIKKVGNGSYCITDHH 341 + + SY ++ Sbjct: 408 VHQLADYDTERGISYWTKNYR 428 >gi|317124916|ref|YP_004099028.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043] gi|315589004|gb|ADU48301.1| L-lysine 2,3-aminomutase [Intrasporangium calvum DSM 43043] Length = 483 Score = 276 bits (707), Expect = 4e-72, Method: Composition-based stats. Identities = 86/383 (22%), Positives = 159/383 (41%), Gaps = 44/383 (11%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKK---EQIDEIKEISNHYSIALTPVIANLINPHN---- 51 Q R + + + L + L+ ++ + S+ + P + N + P Sbjct: 39 WQ-RVNCVRNVKQLRSLMGDLLDDRFYTDLERDQAERATMSMLVPPQMLNTMVPATSAAM 97 Query: 52 -----------PNDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 DPI R +P ++ + P D + +++ +G+ HRYP + Sbjct: 98 PASGADFTEAFYADPIRRYMLPVFSDRRTDWPSHPFSSRDSLHEHDMWVAEGLTHRYPTK 157 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIF 149 +L +LL CP YC C R ++VG+ V K +A LAY++ + +V+ Sbjct: 158 VLAELLPTCPQYCGHCTRMDLVGNSTPQVNKLKFDLKPVDRYDAMLAYLRNTPSVRDVVV 217 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--------QCLK 201 +GGD + K L+ L L I +++ +R ++ + PQ + + + Sbjct: 218 SGGDVANMPWKNLESFLDRLLEIDNIRDIRLATKALMGLPQHWFADDVVEGVARVAATAR 277 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRT 260 G + I H N+ + A + AG+ + +Q VL++GIND E L +L Sbjct: 278 ARGVSLAIHTHVNNAQSVTPAVARASRAMLEAGVRDVRNQGVLMRGINDSTEQLLDLCFA 337 Query: 261 FVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + I PYY + D+ H+RL++ E Q++ S+ + G P + D+P GK Sbjct: 338 LADGASITPYYFYMCDMIPFAEHWRLSLAEAQRLQHSIMGYLPGFATPRIVCDVP-FVGK 396 Query: 320 VKIDTHNIKKVGNG-SYCITDHH 341 + + G SY ++ Sbjct: 397 RWVHQQDEYDTERGISYWRKNYR 419 >gi|297570169|ref|YP_003691513.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio alkaliphilus AHT2] gi|296926084|gb|ADH86894.1| lysine 2,3-aminomutase YodO family protein [Desulfurivibrio alkaliphilus AHT2] Length = 594 Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats. Identities = 80/364 (21%), Positives = 145/364 (39%), Gaps = 28/364 (7%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIA 57 Q+RH + + L + + + + H +TP +L++ + I Sbjct: 196 WQIRH-IVRELETLEKLVKLSDSEREAVALARKHKLPFGITPYYLSLMDDELGGRDASIR 254 Query: 58 RQFIPQKEELNILPEERE----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113 Q +P + + ++ D +G+ + SP I RYP +LK + CP C +C Sbjct: 255 AQVLPPMNYVQGVLAVKDPSCLDFMGEEDTSPFDLITRRYPAICILKPYNTCPQICVYCQ 314 Query: 114 RREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 R + G + + A+ +I + I EV+ TGGDPL + ++ L ++++ + Sbjct: 315 RNWEIDEVMAPGAFAGMEKIKEAIDWIHDHPAIHEVLITGGDPLAMGNETLAEIIERVAA 374 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAI 227 I V+ +R +R + P R L + +P V + H HPYE + E + A+ Sbjct: 375 IPTVERIRLGTRTLVTMPMRFTEGLAGLIARHHRPGRREVAVMTHVQHPYEITPEMVEAV 434 Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287 +RL GI + +Q V I+ E A L R I PYY + T +R+ I Sbjct: 435 NRLRQLGIPVYNQLVYTFFISRRFEA-ACLRRQLRLSGIDPYYTFNTKGKDETIGYRVPI 493 Query: 288 EEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 + + GL G+ N+ + G ++ N++ Sbjct: 494 ARLIQEQEEEARLLPGL-------------GRTDEAVFNVPRQGKSYLRAREYRNLLAIK 540 Query: 348 PPKS 351 P + Sbjct: 541 PNGA 544 >gi|257056184|ref|YP_003134016.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017] gi|256586056|gb|ACU97189.1| L-lysine 2,3-aminomutase [Saccharomonospora viridis DSM 43017] Length = 459 Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats. Identities = 92/390 (23%), Positives = 164/390 (42%), Gaps = 43/390 (11%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYS---IALTPVIANLINPH---NP 52 Q R + + + L L+++ D++ + + L P + N + PH +P Sbjct: 47 WQ-RVHCVRNIKQLRAVMGDLLEERFYDDLAADQQQMATMSMLLPPQMLNTMAPHAGTDP 105 Query: 53 N--------DPIARQFIPQKE----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100 DPI R +P E P + D + + ++G+ HRYP ++L + Sbjct: 106 AKVTEAFYADPIRRYMLPVHSDRHPEWPSHPHSQRDSLHEAEMWVVEGLTHRYPTKVLAE 165 Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGD 153 LL CP YC C R ++VG+ V + +A + Y++ + +V+ +GGD Sbjct: 166 LLSTCPQYCGHCTRMDLVGNSTPQVDKHRLTLKPVDRQDAMIDYLKRTPGVRDVVVSGGD 225 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL-------KEAGK 205 + +L+ L L I+ V+ +R S+ PQ P++++ L + G Sbjct: 226 VANVPWHQLEAFLMRLLDIETVRDIRLASKALAGLPQHWLQPKVVEGLARVAGTARRRGV 285 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-E 263 + I H NH + A G+ + +Q VL++G+N P L +L E Sbjct: 286 NLAIHTHINHVQSVTPLVAEATRAALEVGVRDVRNQGVLMRGVNATPADLLDLCFALQGE 345 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 I PYY + D+ H+RL + E Q++ ++ + G P + D+P GK + Sbjct: 346 ANILPYYFYMCDMIPNAEHWRLAVWEAQELQHAIMGYLPGYATPRIVCDVP-YVGKRWVH 404 Query: 324 --THNIKKVGNGSYCITDHH-NIVHDYPPK 350 ++ G SY ++ I HD P Sbjct: 405 QVAEYDRERGV-SYWTKNYRTGIEHDDPEA 433 >gi|300722010|ref|YP_003711290.1| hypothetical protein XNC1_1003 [Xenorhabdus nematophila ATCC 19061] gi|297628507|emb|CBJ89074.1| conserved hypothetical protein [Xenorhabdus nematophila ATCC 19061] Length = 389 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 97/365 (26%), Positives = 163/365 (44%), Gaps = 24/365 (6%) Query: 1 MQLRHKTLTSAQDL-YNANLIKKEQIDEIKEISNHYSIALTPVIANLI-NPHNPND---- 54 Q ++ L + L E I++ + +TP + I D Sbjct: 26 WQQKN-ALRDEESLRIACGGWNDEITRRIQQNLQGQKMQITPYYLSRILTTSQSGDITTN 84 Query: 55 PIARQFIPQKEELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113 P+ RQ +P E + + E + H+Y +R++L++++ C YC+FCF Sbjct: 85 PLWRQVVPFWNEEKLNGYDGESENWELKEEMKTPICQHKYDNRVILRMVNACNSYCQFCF 144 Query: 114 ---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 R V S K + +L YI+ + EVI +GGDPL+L+ +L + L +R Sbjct: 145 EALRTLKVNSDKSNA-GRTSFQQSLEYIKNTPSVEEVILSGGDPLMLTDSKLDESLAAIR 203 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 I+ ++R HSR +P RI L++ LK+ +H HP+E SEE A+ + Sbjct: 204 EIREDLLIRVHSRALTFNPYRITDALLEILKKHRVN-SFGVHICHPHELSEEFQHAVRCI 262 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEE 289 + I+ S L+GIND+ EIL L + + +KPYYL+H + G+S ++ +I + Sbjct: 263 QSVVPIVFSNMPFLRGINDNEEILHKLFISLYRIGVKPYYLYHFMPFSPGSSEYKASIND 322 Query: 290 GQKIVASLKEKISGLCQPFYILDLPGGYGK--VKI------DTHNIKKVGNGSYCITDHH 341 I+ LK ++S + P Y+ LP GK V + + G Y + Sbjct: 323 AIAIMGKLKRRVSNIALPEYV--LPHMKGKFTVPLFTNPGEMPYFETINGRRYYRFINWR 380 Query: 342 NIVHD 346 N + Sbjct: 381 NEQCE 385 >gi|147919038|ref|YP_687235.1| hypothetical protein RRC148 [uncultured methanogenic archaeon RC-I] gi|110622631|emb|CAJ37909.1| conserved hypothetical protein [uncultured methanogenic archaeon RC-I] Length = 633 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 86/361 (23%), Positives = 156/361 (43%), Gaps = 28/361 (7%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNH-YSIALTPVIANLINPHNP---NDPI 56 Q++H LT + + + +++I +K H + +TP +L N + + Sbjct: 236 WQMKH-ILTDYKTISELVRLDQDEISALKFAQEHNIPVQITPYYLSLFNKAGRSALDRAV 294 Query: 57 ARQFIPQKEELNILPEERE-----DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111 Q +P + + R+ D +G+ SP++GI RYP ++LK CP C + Sbjct: 295 RAQVLPSMNYCKTIVKNRQSAADMDFMGEKWTSPVEGITRRYPQILILKPYDSCPQICVY 354 Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 C R + S + + A+ +I++ I EV+ TGGDPL ++ + + +L+ + Sbjct: 355 CQRNWEIKSIDEAEVKRDTIQNAIQWIKDNESISEVLITGGDPLTMNDQYIDSLLRKVSG 414 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAIAAI 227 I HV+ LR +R P+ P RI P+L + LK+ +P V + H HP E + E++ A+ Sbjct: 415 IDHVERLRIGTRTPVTVPFRITPKLAEILKQYHQPGAREVCVVTHFEHPMEMTPESLQAV 474 Query: 228 SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI 287 + AG+ + +Q V N +A + + + PYY + T FR+ I Sbjct: 475 QTIRQAGMSVYNQQVFTYY-NSRKFEIAKMRKVLKICGVDPYYTFNTKGKEETMDFRVPI 533 Query: 288 EEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 ++ G+ + D P N+ K+G H ++ Sbjct: 534 ARVEQERKEEARLQPGIVRT----DEP---------VFNVPKLGKSHLRAWQDHEVIMIL 580 Query: 348 P 348 P Sbjct: 581 P 581 >gi|218516316|ref|ZP_03513156.1| L-lysine 2,3-aminomutase protein [Rhizobium etli 8C-3] Length = 195 Score = 274 bits (702), Expect = 1e-71, Method: Composition-based stats. Identities = 115/195 (58%), Positives = 153/195 (78%) Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 LS +RL+ +++ L I HV+I+RFH+RVP+VDP++I+ LI LK +GK VY+A+HANHP Sbjct: 1 LSPRRLRDIMEALAAIAHVKIVRFHTRVPVVDPEKIDAALIAALKASGKTVYVALHANHP 60 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E + EA AA +RL +AGI ++SQSVLLKG+NDDP++LA LM+ FVE+R+KPYYLHHPDL Sbjct: 61 RELTREARAACARLVDAGIAMISQSVLLKGVNDDPDVLAELMKAFVEIRVKPYYLHHPDL 120 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336 A GT HFRLTI+EGQ+IVA+L+ +ISGLCQP YILD+PGG+GK I I+ G+G Y Sbjct: 121 APGTGHFRLTIDEGQRIVAALRGRISGLCQPAYILDIPGGHGKAVIGESVIRATGDGCYS 180 Query: 337 ITDHHNIVHDYPPKS 351 ++D+ H YPP Sbjct: 181 VSDYRGGEHSYPPAG 195 >gi|148252209|ref|YP_001236794.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1] gi|146404382|gb|ABQ32888.1| L-lysine 2,3-aminomutase [Bradyrhizobium sp. BTAi1] Length = 485 Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats. Identities = 84/376 (22%), Positives = 146/376 (38%), Gaps = 48/376 (12%) Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQKEELN 68 + + + I + + + + NLI+ P+DP+ R P + L Sbjct: 49 LSQVPQLKSLPPRLVRGIHLAAMVFPFKVNSYVLDNLIDWGAAPDDPMFRLVFPHPDMLQ 108 Query: 69 ILPEEREDPIGDNNHSP-------------------------------LKGIVHRYPDRI 97 E D + + L+G+ H+Y + Sbjct: 109 DGDREVLDDLLERGDEVAIAAEVQRIRADMNPHSSDQIVNVPLFEGASLEGVQHKYDETA 168 Query: 98 LL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 L K C YC FCFR ++D E AY++ + I +V+ TGGDP Sbjct: 169 LFFAKQGQTCHSYCSFCFRWPQFVDSAVDRFEARDGERLYAYLRTRRDITDVLLTGGDPF 228 Query: 156 ILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRIN-----PELIQCL---KEAGK 205 ++S +RL L+ L HV +R ++ PQR EL + L ++GK Sbjct: 229 VMSSRRLADYLEPLLAPEFSHVTNIRIGTKALSYWPQRFYVGAEAEELNRLLVRVADSGK 288 Query: 206 PVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 V + H NH E + E A+ L +G ++ +QS +L+ +NDD + R V + Sbjct: 289 QVAVMAHVNHWRELTPEPVHRAVEALRRSGAVIRTQSPVLRHVNDDVAVWRRNWRDQVAM 348 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 + PYY+ +FR++++ I + +SG+C+ + G GK+ + Sbjct: 349 GMIPYYMFVERDTGANHYFRISLDRALAIYQAAAAAVSGICRTARGPVMSAGPGKIHVL- 407 Query: 325 HNIKKVGNGSYCITDH 340 +GN Y + Sbjct: 408 -GRLAIGNDDYFVLSF 422 >gi|153875079|ref|ZP_02003031.1| Protein of unknown function DUF160 [Beggiatoa sp. PS] gi|152068457|gb|EDN66969.1| Protein of unknown function DUF160 [Beggiatoa sp. PS] Length = 314 Score = 273 bits (700), Expect = 2e-71, Method: Composition-based stats. Identities = 61/247 (24%), Positives = 109/247 (44%), Gaps = 13/247 (5%) Query: 89 IVHRYPDRILLKLLH--VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 + H+Y + +L C YC FCFR L+S++ +A + Y+ E ++ + Sbjct: 1 MQHKYRETVLFFPSQGQTCHAYCSFCFRWPQFVGISDLKLASREVDALIQYVSEHPEVSD 60 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPE--------L 196 ++ TGGDP+I+ + L + L + H++ +R ++ P R + L Sbjct: 61 ILLTGGDPMIMKTRILATYIDALLEANLPHLKTIRIGTKALSYWPYRFTSDADAEDLLTL 120 Query: 197 IQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 + K + H NHP E ++ AI + G + +QS LL IND PEI A Sbjct: 121 FAKVATKNKHLAFMAHFNHPRELKTDAVREAIKGIRETGAQIRTQSPLLAHINDQPEIWA 180 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPG 315 + +T EL PYY+ +F +++ I + + ++GL + + Sbjct: 181 EMWKTQTELGCIPYYMFITRDTGAQHYFGVSLIRAWDIFKNAYQNVTGLARTVRGPSMSA 240 Query: 316 GYGKVKI 322 GKV++ Sbjct: 241 TPGKVQM 247 >gi|325916984|ref|ZP_08179226.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937] gi|325536835|gb|EGD08589.1| lysine 2,3-aminomutase [Xanthomonas vesicatoria ATCC 35937] Length = 216 Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats. Identities = 77/218 (35%), Positives = 120/218 (55%), Gaps = 2/218 (0%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 C V+CR+CFRR +++ + + A+ I + I EV+ +GGDPL L+ +L + Sbjct: 1 CAVHCRYCFRRHFPYAEE--TAAREGWREAVDAIAADADIDEVLLSGGDPLSLASPKLAE 58 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224 + L I H++ LR HSR+P+V P R++ L+ L+ PV IHANH EF + Sbjct: 59 LTDALAAIPHLKRLRIHSRLPVVLPARVDAPLLAWLRSLPWPVAFVIHANHANEFDADVD 118 Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284 A+ L + G+ LL+Q+VLL+G+ND + LA L + PYYLH D AG +HF Sbjct: 119 TAMRALRDVGVQLLNQAVLLRGVNDSVDALAALSERSFAAGVLPYYLHQLDRVAGVAHFE 178 Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + + + A L ++SG P + ++PG GK + Sbjct: 179 VDDARARALHAELATRLSGYLVPRLVREIPGDTGKRPL 216 >gi|256810214|ref|YP_003127583.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus fervens AG86] gi|256793414|gb|ACV24083.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus fervens AG86] Length = 620 Score = 272 bits (697), Expect = 4e-71, Method: Composition-based stats. Identities = 81/362 (22%), Positives = 149/362 (41%), Gaps = 36/362 (9%) Query: 1 MQLRH-----KTLTSAQDLYNANL--IKKEQIDEI-KEISNHYSIALTPVIANLINPHNP 52 Q ++ K + + ++L I E ++ I K + N +TP +L + NP Sbjct: 217 WQFKNVIKGLKGIETLKELREETNFKISDEDLEIIEKAVKNGIPFGITPYYLHLFDFENP 276 Query: 53 ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103 + + RQ IP + + + E +ED +G+++ SP+ + RY ++K Sbjct: 277 YVEDLAVRRQVIPPEWYVEKMMEHKEDRDKAFDFMGEHDTSPIDLVTRRYVPIAIIKPYE 336 Query: 104 VCPVYCRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 CP C +C R MV + E AL + E + E++ TGGDP LS K + Sbjct: 337 SCPQICVYCQRNWMVQDFDTKAFKGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAI 396 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 +++L + + HV +RF +R + P RI EL + L K + ++ H YE + E Sbjct: 397 ERILNRVSEMDHVIGVRFGTRTIVTAPMRITDELAELLGSFEKSLMVSTHVESCYEITPE 456 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 + +L I + +Q V + ++ E +A L ++ I PYY +P Sbjct: 457 VKETVEKLRKNNIYVYNQHVFHRYVSRRFENVA-LRIALKKVGIIPYYTFYPKGKMEHKD 515 Query: 283 FRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 + + I Q++ + L G + N+ ++G + Sbjct: 516 YLVPIARLAQEVKEEAR--------------LLPGSFRTDEPIFNVPRMGKNH--LRAWQ 559 Query: 342 NI 343 + Sbjct: 560 DR 561 >gi|218661195|ref|ZP_03517125.1| hypothetical protein RetlI_17423 [Rhizobium etli IE4771] Length = 320 Score = 271 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 11/290 (3%) Query: 38 ALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 +T + I + + P +E D G++ ++ + G H+Y Sbjct: 15 RVTRFYRDQIVKSGFFEQLKFIVEPSLKEFESPG--SLDTSGEHENTVVPGFQHKYEQTG 72 Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 LL C YCR+CFR+ +VG + + + + + YI ++ V+ +GGDP +L Sbjct: 73 LLLATDRCASYCRYCFRKRIVGQESSEIAN--EFAQIVEYIGSHLEMTNVLISGGDPFVL 130 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP----ELIQCLKEAGKPVYIAIHA 213 +L +L L H++ +RF +++ P+R L Q + EAGK I H Sbjct: 131 RTGKLHGILDYLLPFTHLKSIRFGTKMLAYAPKRFEDPELGALFQRIHEAGKTAVIVTHF 190 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 +H E S +A +I L + G+ L+QSVLL +NDDPEILA+ T ++ I PYYL Sbjct: 191 DHIGEISLDAERSIQSLRSHGVQFLNQSVLLAKVNDDPEILASTFATCHQMGIHPYYLFQ 250 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP-FYILDLPGGYGKVKI 322 G SHF++ ++ G +I + +++SG+ + YI + GK+++ Sbjct: 251 SRPVKGASHFQVPLDRGLEIAHGVSQRLSGVQKTFKYI--MSHYTGKIEL 298 >gi|289192520|ref|YP_003458461.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp. FS406-22] gi|288938970|gb|ADC69725.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus sp. FS406-22] Length = 620 Score = 271 bits (695), Expect = 7e-71, Method: Composition-based stats. Identities = 85/362 (23%), Positives = 150/362 (41%), Gaps = 36/362 (9%) Query: 1 MQLRH--KTLTSAQDLYNA-----NLIKKEQIDEI-KEISNHYSIALTPVIANLINPHNP 52 Q ++ + L + L I E ++ I K + N +TP +L + NP Sbjct: 217 WQFKNVLRGLKGVKILRELREETNFKISDEDLEIIEKAVKNGIPFGITPYYLHLFDFENP 276 Query: 53 ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103 + + RQ IP + + + E +ED +G+++ SP+ + RY ++K Sbjct: 277 YVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMGEHDTSPIDLVTRRYVTIAIIKPYE 336 Query: 104 VCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 CP C +C R MV + + E AL + E + E++ TGGDP LS K + Sbjct: 337 SCPQICVYCQRNWMVQDFSEKAFPGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAI 396 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 +K+L + + HV +RF +R + P RI EL + L K V I+ H + YE + E Sbjct: 397 EKMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKSVMISTHVENCYEITPE 456 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 A+ +L I + +Q V + ++ E +A L ++ I PYY +P Sbjct: 457 VKEAVKKLRTNNIYVYNQHVFHRYVSRRFENVA-LRIALKKVGIIPYYTFYPKGKMEHKD 515 Query: 283 FRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 + + I Q++ + L G + N+ ++G + Sbjct: 516 YLVPIARLAQEVKEEAR--------------LLPGSFRTDEPIFNVPRMGKNH--LRAWQ 559 Query: 342 NI 343 + Sbjct: 560 DR 561 >gi|219117417|ref|XP_002179503.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gi|217409394|gb|EEC49326.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length = 470 Score = 271 bits (695), Expect = 9e-71, Method: Composition-based stats. Identities = 78/373 (20%), Positives = 152/373 (40%), Gaps = 52/373 (13%) Query: 2 QLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN---DPIA 57 + + +L+ + + + K + +I+ + +P + LI+ + DP Sbjct: 33 RYKAISLSHLEKVAEKHPQLKPHLRDIQLSGLVFPFKASPYYVDELIDWECEDVREDPFY 92 Query: 58 RQFIPQ-------------------------------KEELNILPEEREDPIGDNNHSPL 86 + P +E+LN P +++ + L Sbjct: 93 KLVFPTMDMLIEEHREKLEKAHKAGDPVKLIKTVAEIREDLNPHPAGQKE-LNAPKEDKL 151 Query: 87 KGIVHRYPDRILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H+Y + +L+ C YC +CFR + K+ + Y+ E ++ Sbjct: 152 TGVQHKYSETVLVFPAAAQTCHAYCTYCFRWAQFIGDDELRFAQKEATSLFEYLAEHEEV 211 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP------- 194 +++ TGGDP+I+ K L + L+ L + H++ LR +R PQR Sbjct: 212 SDILMTGGDPMIMKTKSLAQYLEPLTDPNFLPHIKNLRIGTRSLSFWPQRFTTDDDADEC 271 Query: 195 -ELIQCLKEAG-KPVYIAIHANHPYEF-SEEAIAAISRL-ANAGIILLSQSVLLKGINDD 250 EL + ++E G + + I H H E +++ A++R+ A + SQS +++G+NDD Sbjct: 272 IELFRRVREQGNRHIAIMAHLGHDRELSTDKFQDAVNRIQKEAYATIRSQSPIMRGVNDD 331 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 E+ A R V++ I PYY+ +F + + K+ + SGL + Sbjct: 332 AEVWARKWRKEVQMGIIPYYMFMARDTGAQQYFDVPLVRAHKLYSDAIRNCSGLIRTARG 391 Query: 311 LDLPGGYGKVKID 323 + GKV++ Sbjct: 392 PSMSCTPGKVEVT 404 >gi|84496424|ref|ZP_00995278.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649] gi|84383192|gb|EAP99073.1| L-lysine 2,3-aminomutase [Janibacter sp. HTCC2649] Length = 484 Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats. Identities = 84/388 (21%), Positives = 167/388 (43%), Gaps = 51/388 (13%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKE-----QIDEIKEISNHYSIALTPVIANLI----NP 49 Q R + + L L+ ++ + D+++ + S+ + P + N + + Sbjct: 40 WQ-RAHCVKNVAQLRELMGDLLTEDFYADLERDQVERAT--MSMLVPPQMMNTMVSEMSW 96 Query: 50 HN--------------PNDPIARQFIP----QKEELNILPEEREDPIGDNNHSPLKGIVH 91 + DP+ R +P ++ + P D + +++ ++G+ H Sbjct: 97 ADGSMPAAGAAFTEAFLADPVRRYMLPVFSDRRTDWPSHPFAARDSLHEHDMWAVEGLTH 156 Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQI 144 RYP ++L ++L CP YC C R ++VG+ ++ K A L Y+Q Q+ Sbjct: 157 RYPTKVLAEMLPTCPQYCGHCTRMDLVGNSTAQIVKLKLAGKPVDRHAAMLDYLQRTPQV 216 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL--- 200 +V+ +GGD + K L+ L L I +++ +R ++ + PQ P++++ + Sbjct: 217 RDVVVSGGDVANMPWKNLEGFLDKLMRIDNIRDIRLATKALMGLPQHWLQPDVVEGVARV 276 Query: 201 ----KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILA 255 + G + I H NH + A + AG+ + +Q VL++GIND + L Sbjct: 277 SALARSRGVSLAIHTHVNHAQSVTPLVADASKAMLEAGVRDVRNQGVLMRGINDTSKDLL 336 Query: 256 NLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 +L + I PYY + D+ + H+RL + E Q + S+ + G P + D+P Sbjct: 337 DLCFALQDEAMITPYYFYMCDMIPFSEHWRLALHEAQHLQHSIMGYLPGFATPRIVCDVP 396 Query: 315 GGYGKVKIDTHNIKKVGNG-SYCITDHH 341 GK + + G S+ ++ Sbjct: 397 -FVGKRWVHQVDTYDRDKGMSFWRKNYR 423 >gi|15668815|ref|NP_247618.1| hypothetical protein MJ_0634 [Methanocaldococcus jannaschii DSM 2661] gi|2496087|sp|Q58051|Y634_METJA RecName: Full=Uncharacterized KamA family protein MJ0634 gi|1591346|gb|AAB98629.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 620 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 85/362 (23%), Positives = 149/362 (41%), Gaps = 36/362 (9%) Query: 1 MQLRH-----KTLTSAQDLYNANL--IKKEQIDEI-KEISNHYSIALTPVIANLINPHNP 52 Q ++ K + ++L I E ++ I K + N LTP +L + NP Sbjct: 217 WQFKNVLRGLKGVKILRELREVTNFKISDEDLEIIEKAVKNGIPFGLTPYYLHLFDFENP 276 Query: 53 ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103 + + RQ IP + + + E +ED +G+++ SP+ + RY ++K Sbjct: 277 YVEDLAVRRQVIPPEWYVEKMIEHKEDRNIAFDFMGEHDTSPIDLVTRRYVTIAIIKPYE 336 Query: 104 VCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 CP C +C R MV + E AL + E + E++ TGGDP LS K + Sbjct: 337 SCPQICVYCQRNWMVQDFDAKAFPGWEKVEKALDWFAEHDSMIEILITGGDPFSLSDKAI 396 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 +K+L + + HV +RF +R + P RI EL + L K + I+ H YE + E Sbjct: 397 EKMLNRIAEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKSLMISTHVESCYEITPE 456 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 A+ +L I + +Q V + ++ E +A L ++ I PYY +P Sbjct: 457 VAEAVKKLRTNNIYIYNQHVFHRYVSRRFENVA-LRIALKKVGIIPYYTFYPKGKMEHKD 515 Query: 283 FRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 + + I Q++ + L G + N+ ++G + Sbjct: 516 YLVPIARLAQEVKEEAR--------------LLPGSFRTDEPIFNVPRMGKNH--LRAWQ 559 Query: 342 NI 343 + Sbjct: 560 DR 561 >gi|218781690|ref|YP_002433008.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum alkenivorans AK-01] gi|218763074|gb|ACL05540.1| lysine 2,3-aminomutase YodO family protein [Desulfatibacillum alkenivorans AK-01] Length = 594 Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats. Identities = 86/360 (23%), Positives = 154/360 (42%), Gaps = 21/360 (5%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLINP--HNPND-PI 56 ++H + + L + + E+ I +TP A+L++ D + Sbjct: 194 WHVKH-IIRDEKILGDLVQLTDEEKQAIALARERRIPFGITPYYASLMDEKEDRKRDYAV 252 Query: 57 ARQFIPQK------EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 Q IP E E D + +N+ SP++GI RYP ++LK + CP C Sbjct: 253 RAQVIPPLNYIEKLWEARQRSEASMDFMLENDTSPIEGITRRYPMIVILKPILTCPQICV 312 Query: 111 FCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKT 168 +C R + + LS K E A+ +I + +I EV+ TGGDP +LS+ R++ +L Sbjct: 313 YCQRNWEIEDVYSQTAALSQKKLERAIQWIADTPEIREVLVTGGDPFLLSNSRIENLLFR 372 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP----VYIAIHANHPYEFSEEAI 224 L IKH++ +R +R P+ PQRI L + + +P + + H HPYE + A+ Sbjct: 373 LSSIKHIERIRIGTRTPVTLPQRITESLARDIGHFHEPGKREITVITHFEHPYEITPNAM 432 Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR 284 A+ ++ G+ + +Q V N A L + + PYY + T +R Sbjct: 433 EAVQKIRRLGMSVKNQMVFT-TFNSRKFEAAVLRHKLSLIGVSPYYTFNTKGKEETEDYR 491 Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK---VKIDTHNIKKVGNGSYCITDHH 341 + + + A + G + ++ G GK + H++ + + + H Sbjct: 492 VPLARLLQERAEEARLMPGTVRTDGVVFNVPGLGKNDITAMQHHSVLSILPNGRRVYEFH 551 >gi|149924160|ref|ZP_01912537.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1] gi|149814961|gb|EDM74521.1| Radical SAM domain protein [Plesiocystis pacifica SIR-1] Length = 407 Score = 269 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 80/340 (23%), Positives = 139/340 (40%), Gaps = 49/340 (14%) Query: 32 SNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKEELNILPEER--------------- 74 S I LI+ P+DP+ + Q L R Sbjct: 2 STVLPFKTNEYIVEELIDWDRVPDDPMFQLTFVQSGMLAEHDYARMAELVRAGASKAEIR 61 Query: 75 -----------EDPIGDNNHSP-------LKGIVHRYPDRILLKL--LHVCPVYCRFCFR 114 P G +H+ L+G+ H+Y + +L C YC FCFR Sbjct: 62 SAADAIRLRLNPHPAGQRSHNVPTVDGRRLEGVQHKYRETVLFFPQQGQTCHAYCTFCFR 121 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR--YI 172 +G S++ Y++ + +V+FTGGDP+++ + L++ ++ L Sbjct: 122 WAQFVGLEGMKFESREMADLTTYLRNNPAVTDVLFTGGDPMVMKTRVLRRYIEPLLHPDF 181 Query: 173 KHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF-SEEA 223 +H+ +R ++ PQR + L + + +G+ + + H NHP E +E A Sbjct: 182 EHIN-VRIGTKSVSYWPQRYVSDDDADELLALFEEVSASGRHLALMAHYNHPRELQTEVA 240 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283 A++R+ + G + QS L++ IND PE A L RT V+L PYY+ ++F Sbjct: 241 QRAVARIRSTGAQIRIQSPLIRRINDAPETWAELWRTGVKLGCIPYYMFVERDTGPRNYF 300 Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 + + +I ++SGL + + GKV +D Sbjct: 301 EVPLARAWEIFGDAYRQVSGLARTVRGPSMSTMPGKVLVD 340 >gi|261402967|ref|YP_003247191.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus vulcanius M7] gi|261369960|gb|ACX72709.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus vulcanius M7] Length = 621 Score = 269 bits (689), Expect = 4e-70, Method: Composition-based stats. Identities = 84/362 (23%), Positives = 148/362 (40%), Gaps = 36/362 (9%) Query: 1 MQLRH--KTLTSAQDLYNA-----NLIKKEQIDEI-KEISNHYSIALTPVIANLINPHNP 52 Q ++ + L + L I + ++ I K + N LTP +L + NP Sbjct: 218 WQFKNVLRGLKGVEILKKLREETNFKISDDDLEIIEKAVKNGIPFGLTPYYLHLFDFENP 277 Query: 53 ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103 + + RQ IP + + + E +ED +G+++ SP+ I RY ++K Sbjct: 278 YVEDLAVRRQVIPPEWYVEKMIEHKEDRDTAFDFMGEHDTSPIDLITRRYVTIAIVKPYE 337 Query: 104 VCPVYCRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 CP C +C R MV + E AL + E + E++ TGGDP LS K + Sbjct: 338 SCPQICVYCQRNWMVQDFDAKAFKGWEKIEKALDWFAEHDSMIEILITGGDPFSLSDKAI 397 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 +++L + + HV +RF +R + P RI EL + L K + I+ H YE + E Sbjct: 398 ERMLNRISEMNHVVGVRFGTRTIVTAPMRITDELAELLGSFEKRIMISTHVESCYEITPE 457 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH 282 A+ +L I + +Q V + ++ E +A L ++ I PYY +P Sbjct: 458 VKDAVEKLNKNKIYVYNQHVFHRYVSRRFENVA-LRIALKKVGIIPYYTFYPKGKMEHKD 516 Query: 283 FRLTIEE-GQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 + + I Q++ + L G + N+ ++G + Sbjct: 517 YLVPIARLAQEVKEEAR--------------LLPGSFRTDEPIFNVPRMGKNH--LRAWQ 560 Query: 342 NI 343 + Sbjct: 561 DR 562 >gi|71735715|ref|YP_276669.1| arginine aminomutase [Pseudomonas syringae pv. phaseolicola 1448A] gi|71556268|gb|AAZ35479.1| arginine aminomutase, putative [Pseudomonas syringae pv. phaseolicola 1448A] Length = 385 Score = 269 bits (688), Expect = 6e-70, Method: Composition-based stats. Identities = 93/364 (25%), Positives = 160/364 (43%), Gaps = 20/364 (5%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPH---NP--NDP 55 Q ++ +E I++ + +TP +LI P P Sbjct: 20 WQQKNALRDEPALRSACGGWNQEISIRIEQNLLGRKMQITPYYVDLIMQSLGSEPVTEHP 79 Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHS-PLKGIVHRYPDRILLKLLHVCPVYCRFCF- 113 + RQ +P E + + + NH H+Y +R++L++ + C YC+FCF Sbjct: 80 LWRQVVPYWNENVMGDYDGASENWELNHEMKTPICQHKYDNRVILRMTNTCNAYCQFCFE 139 Query: 114 --RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 R VG+ K + + ++ YI+ I EVI +GGDPL+LS ++L++ L LR Sbjct: 140 ALRTLQVGTDKKNANTDLFLD-SVEYIRNNPAIEEVILSGGDPLMLSDRKLEENLAALRS 198 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231 I+ ++R HSR +P R+ E + L + +H HP E S + AIS++ Sbjct: 199 IREDLLIRIHSRALSFNPFRVTDEFVAILAKYKVN-AFGVHVCHPLELSVDFERAISKIR 257 Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL-AAGTSHFRLTIEEG 290 A I+ S LL+G+ND+ + L L + +KPYYL+H + G S ++ +I + Sbjct: 258 IAVPIIFSNMPLLRGVNDNEKTLHRLFIDLYRMGVKPYYLYHFMPFSPGASEYKASISQA 317 Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKI----DTHNIK----KVGNGSYCITDHHN 342 I+ LK ++S + P Y+L G V + ++ + G Y + Sbjct: 318 IAIMNRLKRRVSNIALPEYVLPHAQGKFTVPLVDFEQPEDLPRFENRDGQRYYKFKNCEG 377 Query: 343 IVHD 346 Sbjct: 378 QWCT 381 >gi|332975312|gb|EGK12210.1| hypothetical protein HMPREF9374_1621 [Desmospora sp. 8437] Length = 377 Score = 268 bits (687), Expect = 7e-70, Method: Composition-based stats. Identities = 94/330 (28%), Positives = 157/330 (47%), Gaps = 21/330 (6%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + + + + + ++ + ++P ++ L DP+A+QFIP E E+ G Sbjct: 9 VHRTEREMVLDVIGKFRTKMSPALSRLAKQS---DPVAKQFIPSPYEALDFGTEKPFEEG 65 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 NNH + G+ Y DR +L C YCR+CF++ + +S +D + A+ +I+ Sbjct: 66 KNNHG-IYGLERVYEDRAVLTPYFECSAYCRYCFKKSRTLAGSAKRMSDEDIDKAIRFIE 124 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 S+I V+ TGGDPL+ + L+KVL + I H++ +R +R + P+++ P+L + Sbjct: 125 SDSRIRTVLITGGDPLV-DPRLLEKVLDKVFPIPHIRNIRIGTRNILFSPEKVTPDLAKM 183 Query: 200 LKEA----------GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 + K + I + NH E + E + A RL GI + Q VLLKGIND Sbjct: 184 IARYQQIDYDEPRKSKNISIGLSLNHVDELTPEVVRAYQRLIREGITVRGQVVLLKGIND 243 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309 + L+ TF+ I PYYL H G HFR ++++G ++ L SG Y Sbjct: 244 SVSAMRELLETFLCTGIVPYYLFHCMPVVGAKHFRTSVQKGLDLLQELSPY-SGTTTFQY 302 Query: 310 ILDLPGGYGKVKIDTHN---IKKVGNGSYC 336 + P GK +I + K+ Y Sbjct: 303 VYVTP--IGKHRIAPGHQLEYVKIDGSRYI 330 >gi|256377785|ref|YP_003101445.1| lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827] gi|255922088|gb|ACU37599.1| Lysine 2,3-aminomutase [Actinosynnema mirum DSM 43827] Length = 459 Score = 268 bits (686), Expect = 8e-70, Method: Composition-based stats. Identities = 76/381 (19%), Positives = 154/381 (40%), Gaps = 39/381 (10%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYS---IALTPVIANLINP-----H 50 Q R + + + L L+ +++ + + L P + N + P Sbjct: 48 WQ-RAHCVKNVKQLRAVLGDLVDDRFYADLEADQEQLATMSMLLPPQMLNTVVPRLGEGG 106 Query: 51 N-----PNDPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLKL 101 + DP+ R +P + + + P D + + ++G+ HRYP ++L +L Sbjct: 107 DFTEAFYADPVRRYMLPVRSDRDPDWPSHPHSSRDSLHEAEMWVVEGLTHRYPTKVLAEL 166 Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDP 154 + CP YC C R ++VG+ V K + + Y++ + +V+ +GGD Sbjct: 167 VSTCPQYCGHCTRMDLVGNSTPQVAKHKLALKPVDRQDRIVEYLKSTPGVRDVVVSGGDV 226 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQCL-------KEAGKP 206 + +L+ L L ++ V+ +R ++ PQ + P++++ L G Sbjct: 227 ANVPWPQLESFLMRLLGVETVRDVRLATKALAGLPQHWVQPQVVEGLERVARTAARRGVN 286 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-EL 264 + I H NH + A G+ + +Q VL++G+N L +L E Sbjct: 287 LAIHTHVNHANSVTPLVAEAARTALAVGVRDVRNQGVLMRGVNATATDLLDLCFALQGEA 346 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-D 323 + PYY + D+ H+R+ + E Q++ ++ + G P + D+P GK + Sbjct: 347 GVLPYYFYMCDMIPNAEHWRVAVWEAQELQHAIMGYLPGYATPRIVCDVP-YVGKRWVHQ 405 Query: 324 THNIKKVGNGSYCITDHHNIV 344 + SY ++ + Sbjct: 406 VQEYDRERGVSYWTKNYRTGI 426 >gi|238059077|ref|ZP_04603786.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149] gi|237880888|gb|EEP69716.1| lysine 2,3-aminomutase [Micromonospora sp. ATCC 39149] Length = 469 Score = 266 bits (682), Expect = 2e-69, Method: Composition-based stats. Identities = 84/376 (22%), Positives = 160/376 (42%), Gaps = 37/376 (9%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQ-----IDEIKEISNHYSIALTPVIANLINPHNP--- 52 Q R + + + L ++ + ++ S+ + P + N + PH P Sbjct: 58 WQ-RVNCIKNIKQLRAVLGDTVDESLYTDLAADQDAHATMSMLVPPQMINTMVPHAPPTT 116 Query: 53 ----NDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHV 104 DPI R IP + P D + +++ +G+ HRYP ++L +LL Sbjct: 117 EALLADPIRRYMIPVASDRRTDWPSHPYASRDSLHEHDMWVAEGLTHRYPTKVLAELLST 176 Query: 105 CPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLIL 157 CP YC C R ++VG+ V K +A +AY++ + +V+ +GGD + Sbjct: 177 CPQYCGHCTRMDLVGNSTPAVDKLKLTLKPVDRYDAHIAYLKAHPGVRDVVVSGGDVANV 236 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLKE-------AGKPVYI 209 + L+ L L I+ ++ +R ++ + PQ P++++ L+ G + I Sbjct: 237 PWRNLESYLMRLLEIETIRDVRLATKALMGLPQHWLQPDVVEGLERVARTAARRGVNLAI 296 Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD-PEILANLMRTFVELR-I 266 H NH + A + G+ + +Q VL++G+N P++L L R F + I Sbjct: 297 HTHVNHRQSITPLVAKAAQTALDVGVRDVRNQGVLMRGVNATAPDLLGPLFRPFRRKKKI 356 Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI-DTH 325 PYY + D+ H+R+ + Q++ + + G P + D+P GK + Sbjct: 357 LPYYFYMCDMIPNAEHWRVPVWHAQQLQHDIMGYLPGYATPRIVCDVP-FVGKRWVHMLT 415 Query: 326 NIKKVGNGSYCITDHH 341 + + SY ++ Sbjct: 416 DYDREHGISYWTKNYR 431 >gi|6729659|emb|CAB67710.1| hypothetical protein [Streptomyces rochei] Length = 403 Score = 266 bits (682), Expect = 3e-69, Method: Composition-based stats. Identities = 78/328 (23%), Positives = 142/328 (43%), Gaps = 34/328 (10%) Query: 53 NDPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108 +DP+ R +P + + P D + + + ++G+ HRYP ++L +LL CP Y Sbjct: 56 DDPVRRYMMPVMSDRHPQWPSHPMASRDSLHEQDMWVVEGLTHRYPTKVLAELLSTCPQY 115 Query: 109 CRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C C R ++VG+ V S+ + LA+++ I +V+ +GGD + R Sbjct: 116 CGHCTRMDLVGNSTPQVTKSRLQLKPVDRADRILAHLRVSPGIRDVVVSGGDLANMPWPR 175 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEAGKPVYIAIHA 213 L++ L L I ++ +R S+ I PQ N + + + G + + HA Sbjct: 176 LERFLDDLLEIDSIRDIRLASKALIGLPQHWNSGPLLEGVARIARKARSRGVRIALHTHA 235 Query: 214 NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYL 271 N + + A L +AG+ + +Q VL++G+ND L +L + I PYY Sbjct: 236 NAAQQVTPAVARAAWALLDAGLHDVRNQGVLMRGVNDSAHDLLDLCFALTDHAGITPYYF 295 Query: 272 HHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID--THNIKK 329 + D+ H+R+ + Q I + + G P + D+P GK +D ++ Sbjct: 296 YMCDMIPNAEHWRVPLHRAQLIQRQIMGYLPGFATPRIVCDVPMA-GKRWVDQTDSYDRE 354 Query: 330 VGNGSYCI----------TDHHNIVHDY 347 +G + D H+ + Y Sbjct: 355 LGVSHWSKSYLTPLEAADRDAHDGTYHY 382 >gi|330508808|ref|YP_004385236.1| KamA family protein [Methanosaeta concilii GP-6] gi|328929616|gb|AEB69418.1| KamA family protein [Methanosaeta concilii GP-6] Length = 582 Score = 266 bits (680), Expect = 4e-69, Method: Composition-based stats. Identities = 77/324 (23%), Positives = 141/324 (43%), Gaps = 18/324 (5%) Query: 1 MQLRH--KTLTSAQDLYNANLIKKEQIDEIK-EISNHYSIALTPVIANLIN--PHNPNDP 55 Q RH K + + + A + +E I+ + NH +TP +L++ P + + Sbjct: 180 WQFRHVFKDIQGLETIKRAIKLDEEHEASIRLALENHVPFGVTPHYLHLMDKEPSDMDYA 239 Query: 56 IARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 + RQ P + + R+D + + + SP+ I RYP ++K CP C Sbjct: 240 VRRQVFPPLSYVENMIAHRKDKKWAFDFMRERDTSPIDLITRRYPRVAIVKPYESCPQIC 299 Query: 110 RFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 +C R + S + + EAA+ + E ++ +V+ TGGDPL++ + ++L Sbjct: 300 VYCQRNWEISSPLMASALAPMEKIEAAIDWFYEHEEMMDVLLTGGDPLVMDDSLIDRILN 359 Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPYEFSEEA 223 L I H++ +R SR P PQR+ EL + L + + + H HPYE + E Sbjct: 360 RLSQIPHLKSIRVASRTPATVPQRLTEELCEILGSYQELGRRNLCLVTHFMHPYEVTPET 419 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283 +AAI R+ GI + +Q V + E ++L ++ + PYY + + Sbjct: 420 LAAIIRVKKTGIEIYNQQVFTFANSRKFET-SSLRIILKQIGVDPYYTFNMKGKTEMEDY 478 Query: 284 RLTIEEGQKIVASLKEKISGLCQP 307 + I + + G+ + Sbjct: 479 AVPIARILQERKEEARLLPGIFRT 502 >gi|302533021|ref|ZP_07285363.1| CmnP [Streptomyces sp. C] gi|302441916|gb|EFL13732.1| CmnP [Streptomyces sp. C] Length = 463 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 84/363 (23%), Positives = 152/363 (41%), Gaps = 44/363 (12%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKE-----QIDEIKEISNHYSIALTPVIANLINPHN-- 51 Q R + A+ L L+ +E + D + + S+ L P + N + Sbjct: 48 WQ-RAHCVKDAKGLRAVVGDLLDEEFYEDWERDRLHRAT--MSVLLPPQMINTMAAEASA 104 Query: 52 ----------PNDPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRI 97 +DP+ R +P + + P D + + + ++G+ HRYP ++ Sbjct: 105 ARPGELTKAFYDDPVRRYMLPVFSDRHPVWPSHPMASRDSLHEQDMWVVEGLTHRYPTKV 164 Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFT 150 L +LL CP YC C R ++VG+ V ++ E LA+++ I +V+ + Sbjct: 165 LAELLSTCPQYCGHCTRMDLVGNSTPQVTKNRLQLKPADRAEQILAHLRATPGIRDVVVS 224 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKE 202 GGD + RL++ + L I+ ++ +R S+ I PQ + + + Sbjct: 225 GGDLANMPWPRLERFVDGLLDIESIRDIRLASKGLIGLPQHWSSPPVLRGVERVAAKARS 284 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTF 261 G V + HAN + + A L AG+ + +Q VL++G+ND L +L Sbjct: 285 RGVRVALHTHANAAQQVTSGVARAAWGLLGAGLHDVRNQGVLMRGVNDSAHDLLDLCFAL 344 Query: 262 VE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 + I PYY + D+ H+R+ + Q I + + G P + D+P GK Sbjct: 345 CDHAGITPYYFYMCDMIPNAEHWRVPLHSAQLIQRQIMGYLPGFATPRIVCDVPMA-GKR 403 Query: 321 KID 323 +D Sbjct: 404 WVD 406 >gi|270264931|ref|ZP_06193195.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13] gi|270041229|gb|EFA14329.1| hypothetical protein SOD_j01470 [Serratia odorifera 4Rx13] Length = 333 Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats. Identities = 99/333 (29%), Positives = 164/333 (49%), Gaps = 21/333 (6%) Query: 20 IKKEQIDEIKEISN--HYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERE-- 75 + EQ +K++ +S LTP + L Q I E N E Sbjct: 1 MSAEQKIVVKQVEEETRFSEKLTPYLKELSKTS--------QAIKDMYEFNPEYETLPAN 52 Query: 76 ---DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG--SQKGTVLSSKD 130 D + + +P+ G V +Y ++L+ L + C CR+C R++ VG L Sbjct: 53 LDVDLLNEKTSTPVFGTVKKYDGQLLVLLSYTCAANCRYCERQDRVGVGLDVEGRLKMSQ 112 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + + YI I+EVI +GGDPL + K LQ + L+ I HV+++R H+R P+ +P Sbjct: 113 IDDIVDYIANDKSIYEVIASGGDPLT-NPKGLQYLFNRLKAIDHVKVVRIHTRYPLQNPG 171 Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 ++ EL++ L +A VY+++H +HP E E I I G +LL+Q+V LK INDD Sbjct: 172 KVRMELMEELAQAKPTVYLSLHIDHPDELQPEVIEMIRAFKKMGYVLLTQTVFLKTINDD 231 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYI 310 + L L EL ++PYY++H T F + +E+ I+ L+ ++SGL P ++ Sbjct: 232 KDTLKTLFLRLFELGVRPYYIYHGQEVTSTRRFVMRLEDEMAIMTQLRNELSGLAFPQHV 291 Query: 311 LDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 +D+P GKV + + + + +TD + Sbjct: 292 IDIPSASGKVVVPSDH---WQTDTATVTDFYGK 321 >gi|256394391|ref|YP_003115955.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928] gi|256360617|gb|ACU74114.1| L-lysine 2,3-aminomutase [Catenulispora acidiphila DSM 44928] Length = 441 Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats. Identities = 74/358 (20%), Positives = 142/358 (39%), Gaps = 45/358 (12%) Query: 11 AQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPN-DPIARQFIPQKEE-- 66 ++ + + + ++ S + + + LI+ P+ DP+ F PQ Sbjct: 22 LDEIAAKYGLDPQLRESVRLFSLVLPFRVNEYVLSELIDWSAPDADPVFHLFFPQPGMLS 81 Query: 67 -----------------------------LNILPEERED-PIGDNNHSPLKGIVHRYPDR 96 +N PE ++D + + PL G H+Y Sbjct: 82 PEDEQRLTAARDGGDAGELARTIAAIRAGMNPHPEHQQDLNVPSDPDGPLPGTQHKYEQT 141 Query: 97 ILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 +L C YC +CFR + S+ D A+AY++ ++ +V+ TGGDP Sbjct: 142 LLYFPAAGQTCHAYCTYCFRWAQFVGEPELRFSAADPARAVAYLRRHPEVTDVLVTGGDP 201 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--------NPELIQCLKEAGKP 206 ++++ +RL++ L+ ++ +Q +R ++ P R L + + EAGK Sbjct: 202 MVMTAERLRQHLEPFLAVESLQTVRIGTKSVASWPHRYVSDHDADATLRLFEQIAEAGKT 261 Query: 207 VYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 + H +HP E A A+SR+ + G ++ Q+ ++ +NDD A L R Sbjct: 262 PALMAHLSHPVELEPAIARTALSRIRDTGALVYCQAPIIGRVNDDAAAWARLWRAEQRAG 321 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 PYY+ +F++ + ++ + GL + + GKV +D Sbjct: 322 AVPYYMFVARDTGPRDYFKVPLARAAEVFRDAYSALPGLARTVRGPVMSTTGGKVVVD 379 >gi|311899414|dbj|BAJ31822.1| putative L-lysine 2,3-aminomutase [Kitasatospora setae KM-6054] Length = 487 Score = 260 bits (665), Expect = 2e-67, Method: Composition-based stats. Identities = 84/379 (22%), Positives = 152/379 (40%), Gaps = 40/379 (10%) Query: 1 MQLRHKTLTSAQDLYNAN--LIKKEQIDEIKEISNHYS---IALTPVIANLINPHN---P 52 Q R + + L L+ DE+ ++ + + P + N + P Sbjct: 39 WQ-RAHCVQGERQLRQVFGPLLTDRFYDELAADQREFATMSVLVPPQMLNTMAAGAELAP 97 Query: 53 N--------DPIARQFIPQKEELNI----LPEEREDPIGDNNHSPLKGIVHRYPDRILLK 100 + DP+ R +P + + + P D + + ++G+ HRYP ++L + Sbjct: 98 DAFTEAFLADPVRRYMLPVRSDRHPSWPSHPLAARDSLHEAQMWVVEGLTHRYPTKVLAE 157 Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-------EAALAYIQEKSQIWEVIFTGGD 153 LL CP YC C R ++VG V ++ E L Y++ + +V+ +GGD Sbjct: 158 LLSTCPQYCGHCTRMDLVGRSTPQVAKARLVLRPADREEQMLDYLKRTPSVRDVVVSGGD 217 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGK 205 + RL+ L L + V+ +R S+ + PQ + + Sbjct: 218 LANVPWPRLESFLLRLLELGSVRDIRLASKSVVGLPQHWLQPKVLSGVERVARLAARRSV 277 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFV-E 263 + + HANH + A L +AG+ + +Q VL++G+N P L +L E Sbjct: 278 NLAVHTHANHAASVTPLVAEAARGLLDAGVRDVRNQGVLMRGVNATPTALLDLCFALQGE 337 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI- 322 I PYY + D+ H+RL + E Q + ++ + G P + D+P GK + Sbjct: 338 ANILPYYFYLCDVIPNAEHWRLPLAEAQHLQEAILGYLPGYATPRLVADVPD-VGKRWVH 396 Query: 323 DTHNIKKVGNGSYCITDHH 341 +V SY ++ Sbjct: 397 QAVGYDRVRGISYWTKNYR 415 >gi|260828943|ref|XP_002609422.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae] gi|229294778|gb|EEN65432.1| hypothetical protein BRAFLDRAFT_124629 [Branchiostoma floridae] Length = 512 Score = 259 bits (663), Expect = 5e-67, Method: Composition-based stats. Identities = 73/343 (21%), Positives = 138/343 (40%), Gaps = 50/343 (14%) Query: 30 EISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQK----------------------- 64 + + + LI+ N P DPI + PQ Sbjct: 80 AAATVLPMRTNNYVVQELIDWSNVPEDPIFQLTFPQPGMLKPEALERISKLMKNNAPRTV 139 Query: 65 ---------EELNILPEERED-PIGDNNHSPLKGIVHRYPDRILLKL--LHVCPVYCRFC 112 +E+N P +++ + + PL G+ H+Y + +L C YC +C Sbjct: 140 LQREAEVIRKEMNPHPAQQKTMNVPRVDGHPLPGLQHKYRETVLFFPAEGQFCHAYCTYC 199 Query: 113 FRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 FR S S D++ Y++ + +++ TGGDP+++S +RL + L Sbjct: 200 FRWAQFTSVGSPQQFQSDDSKLLQLYLRRNRHVSDLLLTGGDPMVMSAQRLGGYILPLLK 259 Query: 172 ---IKHVQILRFHSRVPIVDPQRI-----NPELIQCLK---EAGKPVYIAIHANHPYEF- 219 + ++ +R ++ P R + +L++ + ++G+ + I H +HP E Sbjct: 260 DTCLDNLSTIRIGTKSLAYWPYRYVTDSDSDDLLRIFEEVVKSGRQLAIMAHFSHPRELS 319 Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279 + AI RL G ++ +Q+ L+ +N DP A L+RT L + PYY+ Sbjct: 320 TPTVQEAIRRLRMTGAVIRAQAPLVNHVNADPATWARLIRTETRLGVIPYYMFVERDTGA 379 Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 +F + + +I + +SGL + + GKV + Sbjct: 380 RHYFEVPLARAVEIYSQAFSSVSGLGRTLRGPSMSATPGKVHV 422 >gi|296108845|ref|YP_003615794.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus infernus ME] gi|295433659|gb|ADG12830.1| lysine 2,3-aminomutase YodO family protein [Methanocaldococcus infernus ME] Length = 589 Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats. Identities = 93/379 (24%), Positives = 157/379 (41%), Gaps = 35/379 (9%) Query: 1 MQLRH-----KTLTSAQDLYNANLIKKEQIDEI-KEISNHYSIALTPVIANLINPHNP-- 52 Q ++ K L +DL + I +E + + K I N+ A+TP +L + P Sbjct: 190 WQFKNVIKGKKGLEILRDLKDIVKISEEDLTLLEKAIENNIPYAITPYYLHLFDFDQPYK 249 Query: 53 -NDPIARQFIPQKEELNILPE----EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107 + PI RQ IP + +N++ E D +G+ + +P + I RY ++K CP Sbjct: 250 YDLPIRRQVIPPEHYINMMANAESREVFDYMGELDTTPEELITRRYVTIAIMKPYESCPQ 309 Query: 108 YCRFCFRREMVGSQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 C +C R M+ E AL + +E + E++ TGGDPL LS ++K++ Sbjct: 310 ICVYCQRNWMIKDFGDKAFVGWDKVEKALKWFEEHESMIEILITGGDPLCLSDSSIKKIV 369 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIHANHPYEFSEEAIA 225 + ++ HV +RF +R + P RI L+ L K V ++ HA YE + E Sbjct: 370 ERIKNFDHVIGVRFGTRTLLTAPMRITESLLDVLSILKDKKVIVSTHAESSYEITPEVKR 429 Query: 226 AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL 285 A+ L + I + +Q V + ++ E +A L ++ I PYY +P + + Sbjct: 430 AVELLGSKNIRVYNQHVYHRYVSRRFENVA-LRIALRKVGIIPYYTFYPKGKEEHRDYLI 488 Query: 286 TIEEGQKIVASLKEKISG--------LCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCI 337 I + V + G P + G + I IK G Y + Sbjct: 489 PIARIVQEVHEEARLLPGTFRTDEPIFNVPRLGKNHLRGENRELIA---IKPDGRRVYIM 545 Query: 338 TDHHNIVH--------DYP 348 ++ DYP Sbjct: 546 HPWEKGIYKTNIYVYEDYP 564 >gi|315229952|ref|YP_004070388.1| lysine 2,3-aminomutase [Thermococcus barophilus MP] gi|315182980|gb|ADT83165.1| lysine 2,3-aminomutase [Thermococcus barophilus MP] Length = 647 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 84/366 (22%), Positives = 149/366 (40%), Gaps = 39/366 (10%) Query: 1 MQLRH-----KTLTSAQDLYNANLI--KKEQIDEIK-EISNHYSIALTPVIANLINPHNP 52 Q H K L + ++L ++ +E + +++ + +TP +L + NP Sbjct: 239 WQFSHVLKREKGLETLRELNELGIVKVPEEDLKQVEIAVKYGIPWGITPYYLHLWDFENP 298 Query: 53 ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103 + + RQ +P ++ + + RED +G+++ SPL I RY +LK Sbjct: 299 YKEDRHVRRQVMPPTWYVSNMLQHREDREYYFDFMGEHDTSPLDLITRRYVTIAILKAYD 358 Query: 104 VCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 CP C +C R V G+ EAA+ + E + +V+ TGGDPL LS K Sbjct: 359 TCPQICVYCQRNWEVLEPFMAGSFPGWDKIEAAIEWFGEHESMLDVLITGGDPLALSDKI 418 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPY 217 + K++ L HV +R+ SR+ + P RI L + L + V I+ H Y Sbjct: 419 IDKIMSRLSEFDHVVNIRWGSRIFVTVPMRITNSLAEILGSYIEPGKRNVSISTHFETAY 478 Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277 E + E A ++ GI + +Q V + ++ E +A L ++ I PYY +P Sbjct: 479 EVTPEVAEATYKIRRQGIYIYNQLVYQRNVSRRFENVA-LRIALRKVGIDPYYTFYPKGK 537 Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCI 337 + + I + + G + D P N+ ++G + Sbjct: 538 IEQKDYLVPIARVVQERKEEARLLPG----QFRPDEP---------VFNVPRMGKNH--L 582 Query: 338 TDHHNI 343 + Sbjct: 583 RAWQDR 588 >gi|227357432|ref|ZP_03841786.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906] gi|227162390|gb|EEI47390.1| lysine 2,3-aminomutase [Proteus mirabilis ATCC 29906] Length = 260 Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats. Identities = 57/225 (25%), Positives = 109/225 (48%), Gaps = 4/225 (1%) Query: 6 KTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 + ++ +L ++ ++ + + + + + +PNDP+ Q + Sbjct: 21 QAISDPVELLQLLALEHHAELQRGAQARRLFPLRVPREFVARMKKGDPNDPLLLQVLTAH 80 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E + P DP+ + ++ + G++H+Y +R LL + C V CR+CFRR + Sbjct: 81 AEFTLTPGFSTDPLDEQQNA-VPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPY--EDN 137 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 + + + A+ YI+ ++ E+IF+GGDPL+ L ++ L I H++ LR HSR+ Sbjct: 138 KGNKANWQKAIEYIKNNPKLDEIIFSGGDPLMAKDDELDWLITQLEAIPHIKRLRIHSRL 197 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR 229 P+V P RI L Q L+++ + +H NH E + A + Sbjct: 198 PVVIPARITHRLCQRLQQSRLQNIMVLHINHANEIDDALREACLK 242 >gi|156938169|ref|YP_001435965.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis KIN4/I] gi|156567153|gb|ABU82558.1| lysine 2,3-aminomutase YodO family protein [Ignicoccus hospitalis KIN4/I] Length = 621 Score = 257 bits (658), Expect = 2e-66, Method: Composition-based stats. Identities = 84/369 (22%), Positives = 156/369 (42%), Gaps = 37/369 (10%) Query: 1 MQLRH-----KTLTSAQDLYNANLIKKEQIDEIKEISN-HYSIALTPVIANLINPHN--P 52 ++ + + ++L + +E +++ + +TP +L + Sbjct: 215 WHYKNALRGKRAIKVLKELVK--GLSEEDWKALEDAVKYNVPFGITPYYLHLFDFDEGWK 272 Query: 53 ND-PIARQFIP---QKEELNILPEERE---DPIGDNNHSPLKGIVHRYPDRILLKLLHVC 105 +D + RQ +P +E+ +ERE D +G+++ SP I RYP +LK H C Sbjct: 273 HDYAVRRQVLPPLHYVKEMVAHLDEREYYFDFMGEHDTSPHPLITRRYPMVAILKAAHTC 332 Query: 106 PVYCRFCFRRE--MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 P C +C R M K + + + A+ + E I +V+ TGGDP IL + ++ Sbjct: 333 PQICVYCQRNWEIMTAMDKEAIPTRMTIDEAIDWFAEHPNIIDVLVTGGDPFILRDEDIE 392 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPYEF 219 ++K L + HV+++RF +R P+ P RI PE + L + +++ H H YE Sbjct: 393 HIVKRLSELDHVKMIRFGTRTPVTVPMRITPEFAEMLGSYIEPGKRNIHVVTHVEHAYEV 452 Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279 + E A++ L I + +Q V + E + L + I PYY +P Sbjct: 453 TPEMAEAVTNLRKNKIYVYNQQVFTFWNSRRFET-SALRIALKSIGIDPYYTFYPKGKWE 511 Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITD 339 T + + + I+ KE+ LPG + + + N+ ++G Sbjct: 512 TKDYLVPVAR---ILQERKEE---------ARVLPGTF-RTEEPVFNVPRLGKNHLRAWQ 558 Query: 340 HHNIVHDYP 348 H ++ P Sbjct: 559 DHELIMIRP 567 >gi|212224418|ref|YP_002307654.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1] gi|212009375|gb|ACJ16757.1| Hypothetical UPF0069 protein [Thermococcus onnurineus NA1] Length = 636 Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats. Identities = 76/326 (23%), Positives = 139/326 (42%), Gaps = 24/326 (7%) Query: 1 MQLRH-----KTLTSAQDLYNANLI--KKEQIDEIKEISN-HYSIALTPVIANLINPHNP 52 Q H K L ++L ++ +E ++E++ +TP +L + P Sbjct: 228 WQFSHVLKGRKGLEILRELNELGIVKVPEEDLEEVERAVKYRIPWGITPYYLHLWDFKEP 287 Query: 53 ---NDPIARQFIPQKEELNILPEERED------PIGDNNHSPLKGIVHRYPDRILLKLLH 103 + + RQ +P K ++ + R+D +G+++ SP+ + RY +LK Sbjct: 288 YKEDRHVRRQVMPPKWYMDNMILHRKDREYAFDFMGEHDTSPIDLVTRRYVMIAILKAFD 347 Query: 104 VCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 CP C +C R V G+ E A+ + E+ + +V+ TGGDP LS+K Sbjct: 348 TCPQICVYCQRNWEVLEPFMAGSFPGWDKIEKAIEWFGERESMIDVLITGGDPFALSNKI 407 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA----GKPVYIAIHANHPY 217 + K++ L HV +R+ +R+P+ P R+ EL + L + V ++ H Y Sbjct: 408 IDKIMSRLSEFDHVINIRWGTRIPVTVPMRVTEELAEILGSYIEPGKRNVAVSTHVETAY 467 Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277 E + E A+ L GI + +Q V + ++ E +A L ++ I PYY +P Sbjct: 468 EVTPEMARAVYNLRRQGIYVYNQLVYQRNVSRRFENVA-LRIALKKIGIDPYYTFYPKGK 526 Query: 278 AGTSHFRLTIEEGQKIVASLKEKISG 303 + + I + + G Sbjct: 527 IEQRDYLVPIARVIQERKEEARLLPG 552 >gi|226327321|ref|ZP_03802839.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198] gi|225204539|gb|EEG86893.1| hypothetical protein PROPEN_01188 [Proteus penneri ATCC 35198] Length = 174 Score = 248 bits (633), Expect = 1e-63, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 89/169 (52%) Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 + L ++ L I H++ LR HSR+P+V P R+ L Q L+++ + +H NH Sbjct: 1 MAKDDELDWLITQLEAIPHLKRLRIHSRLPVVIPARVTDALCQRLQQSRLQNIMVLHTNH 60 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275 E + A S+L A + LL+Q VLL+G+ND E+LA+L R + + PYYLH D Sbjct: 61 ANEMDDALREACSKLKKANVTLLNQGVLLRGVNDSAEVLADLSRALFDAGVMPYYLHVLD 120 Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 G +HF + E ++I+ +L +SG P ++ G K +D Sbjct: 121 KVQGAAHFMVPDSEAREIMKALMSLVSGYMVPKLTREIGGEPSKTLLDL 169 >gi|262045422|ref|ZP_06018445.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259037251|gb|EEW38499.1| KamA family protein [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 174 Score = 246 bits (629), Expect = 3e-63, Method: Composition-based stats. Identities = 60/169 (35%), Positives = 89/169 (52%) Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 + L ++ L I HV+ LR HSR+PIV P RI L + + V + H NH Sbjct: 1 MAKDHELDWLMTQLEAIPHVKRLRIHSRLPIVIPARITETLASRFQRSSLQVILVNHVNH 60 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275 E E AA++ L AG+ LL+QSVLL+G+ND+ + LA+L + + PYYLH D Sbjct: 61 ANEIDGEFRAAMAMLRQAGVTLLNQSVLLRGVNDNAQTLADLSNALFDAGVMPYYLHVLD 120 Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 G +HF ++ +E ++I+ L ISG P ++ G K +D Sbjct: 121 RVQGAAHFMVSDDEAREIMRELLTLISGYMVPKMAREIGGEPSKTPLDL 169 >gi|289671289|ref|ZP_06492364.1| lysine 2,3-aminomutase [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 188 Score = 245 bits (626), Expect = 9e-63, Method: Composition-based stats. Identities = 70/188 (37%), Positives = 105/188 (55%) Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 +A I I EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV P+R++ Sbjct: 1 MAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDA 60 Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 L+ L++ PV +HANH EF AA+ L +AG LL+Q+VLL+G+ND + L Sbjct: 61 PLLAWLRQLPWPVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDAL 120 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 A L + PYYLH D AG +HF + + + L ++SG P + ++P Sbjct: 121 AALSERSFAAGVLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIP 180 Query: 315 GGYGKVKI 322 G GK + Sbjct: 181 GDTGKRPL 188 >gi|293393237|ref|ZP_06637552.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582] gi|291424383|gb|EFE97597.1| L-lysine 2,3-aminomutase [Serratia odorifera DSM 4582] Length = 174 Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats. Identities = 56/169 (33%), Positives = 89/169 (52%) Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 + L ++ L I H++ LR HSR+P+V P R+ L Q L + V + H NH Sbjct: 1 MAKDHELDWLIGELEAIPHLKRLRIHSRLPVVIPARVTEALCQRLAASRLQVLMVTHINH 60 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPD 275 E ++++L AG+ LL+QSVLL+ INDD + LA L + I PYY+H D Sbjct: 61 ANEIDAALSTSMAQLRRAGVTLLNQSVLLRHINDDADTLAALSNALFDAGILPYYIHVLD 120 Query: 276 LAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 G +HF ++ ++ ++I+ +L K+SG P ++ G K +D Sbjct: 121 KVQGAAHFMVSDDQAREIMKALLSKVSGYLVPRLTREIGGEPSKTPLDL 169 >gi|111019966|ref|YP_702938.1| lysine 2,3-aminomutase [Rhodococcus jostii RHA1] gi|110819496|gb|ABG94780.1| possible lysine 2,3-aminomutase [Rhodococcus jostii RHA1] Length = 440 Score = 242 bits (618), Expect = 6e-62, Method: Composition-based stats. Identities = 78/341 (22%), Positives = 141/341 (41%), Gaps = 47/341 (13%) Query: 26 DEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQFIPQKEEL---------------- 67 E +S ++ + + LI+ P+DPI R P ++ L Sbjct: 37 HEAHVVSQVLPFKVSSYVVDELIDWGRAPDDPIYRLTFPHRDMLEIEHFDLIERAVAQGD 96 Query: 68 ---------------NILPEERED-PIGDNNHSPLKGIVHRYPDRILLKL--LHVCPVYC 109 N P ++ + ++ G+ H+Y + +L+ C YC Sbjct: 97 RGTVRQAVDTVRAALNPHPGDQLSMNVPQHDDIDGSGMQHKYAETLLVFPRQGQTCHSYC 156 Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 +CFR ++ EA Y+ I +V+ TGGDPL++ + L L+ L Sbjct: 157 GYCFRWAQFVDTPDLKMAMSGPEAMTRYLDLHPGITDVLLTGGDPLVMRTELLASYLEPL 216 Query: 170 RY--IKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANHPYEF 219 +HV+ +R ++ P R+ L++ L AGK V + +H +H E Sbjct: 217 LEPEREHVETIRIGTKAVSFWPYRLLAGPEADDLLRLLERLTAAGKHVAMMLHLSHVAEL 276 Query: 220 -SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278 ++ A A++RLA+ G +L +Q+ +++ +NDDP A+L + V R+ PYY+ Sbjct: 277 QTDAARTALARLASTGAVLRAQAPVVRHVNDDPRTWADLWQAQVRNRVVPYYMFVERDTG 336 Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 +F L + I +++SGL + + GK Sbjct: 337 ARPYFGLPLARAVDIYREALQRVSGLGRTARGPVMSASPGK 377 >gi|58426924|gb|AAW75961.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 202 Score = 235 bits (601), Expect = 7e-60, Method: Composition-based stats. Identities = 65/179 (36%), Positives = 97/179 (54%) Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I EV+ +GGDPL L+ +L ++ L I H++ LR HSR+PIV P+R++ L+ L+ Sbjct: 24 IDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLRIHSRLPIVLPERVDAPLLAWLRSL 83 Query: 204 GKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 P +HANH EF A+ L + G LL+Q+VLL G+ND + LA L Sbjct: 84 PWPAAFVLHANHANEFDSAVDMAMHALRDTGAQLLNQAVLLGGVNDSVDALAALSERSFA 143 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + PYYLH D AG +HF + + + L ++SG P + ++PG GK + Sbjct: 144 AGVLPYYLHQLDRVAGVAHFEVDDARARALHTELATRLSGYLVPRLVREIPGDTGKRPL 202 >gi|213585072|ref|ZP_03366898.1| hypothetical protein SentesTyph_29075 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 219 Score = 233 bits (596), Expect = 2e-59, Method: Composition-based stats. Identities = 61/200 (30%), Positives = 107/200 (53%), Gaps = 4/200 (2%) Query: 8 LTSAQDLYNANLIKKEQ-IDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEE 66 +T+ +L + I+ ++ + ++ +++ + + NP+DP+ RQ + ++E Sbjct: 23 VTNPDELLHLLQIEADENLRARQDARRLFALRVPRAFIARMEKGNPDDPLLRQVLTSRDE 82 Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 83 FIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPYAENQG-- 139 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ AL YI ++ E+IF+GGDPL+ L +L L IKHV+ LR HSR+PI Sbjct: 140 NKRNWTVALEYIAAHPELDEIIFSGGDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPI 199 Query: 187 VDPQRINPELIQCLKEAGKP 206 V P RI EL+ ++ Sbjct: 200 VIPARITDELVARFDQSCLQ 219 >gi|253989648|ref|YP_003041004.1| hypothetical protein PAU_02168 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253781098|emb|CAQ84260.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 384 Score = 222 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 85/333 (25%), Positives = 146/333 (43%), Gaps = 24/333 (7%) Query: 33 NHYSIALTPVIANLINP-----HNPNDPIARQFIPQKEELNI-LPEEREDPIGDNNHSP- 85 N I +T I+ + P+ R P KE L + P E + D + P Sbjct: 35 NLLPIKVTRFFQQKIDEEVATLGHTEGPLHRMVYPTKERLLVCAPGEVAYFVDDRENMPE 94 Query: 86 -LKG-IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEK 141 G I+ +Y +R L C +C++CFR++++ Q T + K +Y+ Sbjct: 95 DAPGNIIQKYRNRALFMPTSTCVSHCQYCFRQDVLSEQHETGKTVLDKAILELDSYLSMH 154 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCL 200 I EVI +GGDP+ L + LQ ++ ++ V+ +R H++ PQ + E ++ L Sbjct: 155 PDIQEVILSGGDPMTLPMESLQSIISAIKSHAQVKSIRIHTKTISYFPQVFKSDEKLRLL 214 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 AG + H HPYE E I R+ + GI +Q +L+ IND PE+L ++T Sbjct: 215 ASAGVRLVF--HLTHPYELCEVVRKTIKRIQDTGIRCYNQFPILRQINDHPEVLRRHLKT 272 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI-SGLCQPFYILDLPGGYGK 319 L I+ + PD ++ F +++ + I+ L + S + +++D GK Sbjct: 273 LDCLGIRNLSVFIPDPINFSALFSISLARLRNIINELNWRSPSWINSTRFVMDTKV--GK 330 Query: 320 VKI----DTHNIKKVGNGSYCITDHHNIVHDYP 348 V++ TH + G I + YP Sbjct: 331 VRVRREDMTHYDAERG---IAIFERDGKTIHYP 360 >gi|83859269|ref|ZP_00952790.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii HTCC2633] gi|83852716|gb|EAP90569.1| hypothetical protein OA2633_12730 [Oceanicaulis alexandrii HTCC2633] Length = 481 Score = 222 bits (567), Expect = 6e-56, Method: Composition-based stats. Identities = 72/336 (21%), Positives = 137/336 (40%), Gaps = 47/336 (13%) Query: 21 KKEQIDEIKE--ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPI 78 E++DE++ ISN T +L + + EE+ L E DP Sbjct: 61 SAEELDELEAAGISNRLPPRATGYYLDLAKRSTA---VKNLIKARPEEMEDLSGE-ADPS 116 Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 +SP+ G++H+Y + L+ ++ C +CR+C+R + + + G +S YI Sbjct: 117 NQLKYSPIPGLLHKY-ELCLVYVVRTCSSWCRYCYRSDFLTGKTGKDTAS--IHEVKDYI 173 Query: 139 QEK------------SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + ++ EV+ +GGDP++LS++ L L L V+++R ++ Sbjct: 174 ETHNAKVERGEITHKPKVREVLLSGGDPMVLSNRNLFDYLNGLAEAG-VEVIRIGTKEMA 232 Query: 187 VDPQRINPELIQCLKEAG--KP---VYIAIHANHPYEF-------------------SEE 222 P+R + + L P V +H HP EF + Sbjct: 233 FYPERFDDNFFRMLDLFHEVHPQVLVAFMVHFTHPDEFLRLDVNGDYVRDERGRPLRNPL 292 Query: 223 AIAAISRLA-NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTS 281 A +RL + L +Q+ ++ G+NDD + L + + + + +Y G Sbjct: 293 VEQAATRLRARPFVTLENQTPIIDGVNDDADALRLMQQELKRMGVNNHYFFQCREIEGFR 352 Query: 282 HFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 F + +E+ K+ A + +SG+ + + L G Sbjct: 353 AFAVPVEKAWKLHAESQHGLSGIERSRFALSTEAGK 388 >gi|251799361|ref|YP_003014092.1| hypothetical protein Pjdr2_5396 [Paenibacillus sp. JDR-2] gi|247546987|gb|ACT04006.1| conserved hypothetical protein [Paenibacillus sp. JDR-2] Length = 336 Score = 219 bits (558), Expect = 6e-55, Method: Composition-based stats. Identities = 83/350 (23%), Positives = 155/350 (44%), Gaps = 68/350 (19%) Query: 20 IKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG 79 + + + + +K+ + NLI+ +P DPI + I E P ++ Sbjct: 14 LSEAERERLKK-----HFRVNDYYLNLIDWDDPKDPIRKHLIAAAGE---APHGIQEFTW 65 Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + G H Y +LL + +AYI Sbjct: 66 EAA-----GCKHIYQSMVLLPVSQA---------------------------AEGIAYIA 93 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--LI 197 E ++I +V+ TG D L+L +L +++ LR I+H+ +R SR+P+ +P RI + L+ Sbjct: 94 EHNEIHKVVLTG-DSLMLGIAKLTSIIEQLRDIEHIGTIRLDSRMPVHNPMRIYEDHALL 152 Query: 198 QCLKEAG---KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 + L + K +Y+ NHP E + EA A + L AG+++L+Q+ ++KG+N+DP +L Sbjct: 153 KMLSQFSSPEKRIYLMTTINHPRELTAEAKKAFNALHQAGVVVLNQTPIVKGVNNDPLLL 212 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAG--------TSHFRLTIEEGQKIVASLKEKISGLCQ 306 L+ + + PY + + F + +++ +++ A L ++I L Sbjct: 213 GKLIDQLSQAGVSPYSFIINRPNSSYPESSLSLQTQFSI-VQQAKELTAELGKRIRLLMA 271 Query: 307 PFYI----LDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 Y LD+ G GK + H+ ++ G G + I+ D PP++S Sbjct: 272 HDYGKVELLDIEG--GKAYVKYHHYQEEGKGRF-------IMLDCPPEAS 312 >gi|302539601|ref|ZP_07291943.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family [Streptomyces hygroscopicus ATCC 53653] gi|302457219|gb|EFL20312.1| L-lysine 2,3-aminomutase, putative/acetyltransferase, GNAT family [Streptomyces himastatinicus ATCC 53653] Length = 362 Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats. Identities = 84/320 (26%), Positives = 137/320 (42%), Gaps = 20/320 (6%) Query: 33 NHYSIALTPVIANLINPHNPNDP-IARQFIPQKEELNILPEEREDPIGDNNHSP-----L 86 ++ ++P + I P + Q++ E E + L Sbjct: 7 GVFAEKISPYLRKKIEEAGEPLPFLDLQYVVDPSEAVEQTFEVARHYQSEMGTVFEGREL 66 Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--- 143 +G+ Y +L++ +C +CR+C R G T LS +D E Y + Sbjct: 67 RGVEKLYRRTLLVEPTTICAAHCRWCIR----GQYDTTTLSREDLEFIARYCGTAPENQD 122 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + EV+ TGGDPLIL R++ +L L V+I+R +RVP+ DP+RI+ + L+ Sbjct: 123 VREVLVTGGDPLILID-RIEWLLDALEEHAPQVEIVRIATRVPLQDPRRIDARMKHALRR 181 Query: 203 AGK-PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 V +A H NH E E A + L AG + Q+VLL+G+ND+ + L L Sbjct: 182 RSTFRVEVATHINHKGELFPEVREAYAALQEAGARIYDQTVLLRGLNDNLDTLVELFDEL 241 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL--KEKISGLCQPFYILDLPGGYGK 319 + I+ +YL H G H R ++ EG ++ L SG +P + L GK Sbjct: 242 RHMDIEAHYLFHCVPIRGMDHHRTSVAEGLELHRRLGASGLTSGRTRPHFT--LMTDVGK 299 Query: 320 VKIDTHNIKKVGNGSYCITD 339 V + +I + + Sbjct: 300 VPLYEGSIIDRDEHNRILLQ 319 >gi|289524601|ref|ZP_06441455.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502159|gb|EFD23323.1| L-lysine 2,3-aminomutase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 169 Score = 218 bits (555), Expect = 2e-54, Method: Composition-based stats. Identities = 68/171 (39%), Positives = 106/171 (61%), Gaps = 2/171 (1%) Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 E N E+ DP+ ++ ++P+ G VHRYPDR +L + C +YCRFC RR G + Sbjct: 1 SAERNTAVEDFHDPLAEDRYAPVPGFVHRYPDRGILLVTDQCSMYCRFCTRRRFAG-EID 59 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 S ++ +AA+ YI++ + +++ TGGDPL + L+ +L++LR I HV+I+R +R Sbjct: 60 RPKSREEMQAAIDYIEKTEALRDILITGGDPLTMEDDNLEWLLRSLRRIPHVEIIRIGTR 119 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 VP V PQRI L+ LK+ P++I +H NHP E + + A++ LANAG Sbjct: 120 VPAVMPQRITNSLVTMLKKF-HPLWINVHFNHPKEITPHSARALNILANAG 169 >gi|226312788|ref|YP_002772682.1| hypothetical protein BBR47_32010 [Brevibacillus brevis NBRC 100599] gi|226095736|dbj|BAH44178.1| hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 421 Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats. Identities = 90/359 (25%), Positives = 154/359 (42%), Gaps = 21/359 (5%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K + +KE+ + E ++ +T A LI + ++P Q I Sbjct: 16 KGFEEFATIVGFTEAEKEERGALLE-QSYMPFKVTRYYAELI--ASQSEPYRTQMI---N 69 Query: 66 ELNILPE-----EREDPIGDNNHSP--LKGIVHRYPDRILLKLLHVCPVYCRFCFR-REM 117 + P R DP G+ ++ + H+Y +LL + C C+FC++ E+ Sbjct: 70 IVLPPPGVKPYKGRFDPYGNKSYRQDETAFLQHKYKKTLLLHIDDFCIANCQFCYKVNEI 129 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-SHKRLQKVLKTLRYIKHVQ 176 G E A+ Y++ I V+FTGGDP L K++ TL +K ++ Sbjct: 130 RHEDIGYTNIMDKAERAVQYLEAHPYIDNVLFTGGDPASFRKTSDLIKLISTLLSVKSIR 189 Query: 177 ILRFHSRVPIVDPQRINP-ELIQCLKE----AGKPVYIAIHANHPYEFSEEAIAAISRLA 231 ++RF ++ DP R EL+ + GK V + NHP E S+ +I A L Sbjct: 190 LVRFATKALAYDPARFLDGELLAFFDQVRQTPGKQVSVISQFNHPGEISDVSIQATQALL 249 Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291 + G+ + Q +++G+ND E L +L R F++ RI YYL G + + ++E Sbjct: 250 SVGVQIRGQPAIIRGVNDSVETLIDLQRKFLDNRIISYYLTVFMPVRGVEQYAIPLDEAF 309 Query: 292 KIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPK 350 + VA K + GL + +L +GK++I + H + DY P+ Sbjct: 310 RNVAESKRNLGGLEK-KGVLLTSHDFGKLEICGFYPTAERPEKIVLKWHQAVGPDYLPE 367 >gi|302337139|ref|YP_003802345.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293] gi|301634324|gb|ADK79751.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293] Length = 818 Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats. Identities = 83/330 (25%), Positives = 138/330 (41%), Gaps = 34/330 (10%) Query: 7 TLTSAQDLYNANLI--KKEQIDEIKEISNHYSIALTPVIAN--LINPHNPNDPIARQFIP 62 ++ L + + E++++ Y + L+ L++P +A Q++P Sbjct: 121 SIGDVDQLVAKTNLMVPEAARTELQKVIETYPVRLSYHTIRQMLLSPD-----VAYQYMP 175 Query: 63 QKEELNILPEEREDPIGDNNHSP----LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 EEL DP+G N + Y +R++ L CPVYCRFCFR+ Sbjct: 176 FVEEL--------DPVGHTNTWIGQFHQGLLEQMYQNRVIFLLNMSCPVYCRFCFRKHK- 226 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 S+ + +D A+A++++ I E++ TGGDP L+ + + L I HVQ L Sbjct: 227 ESRNEKNPTVEDVNRAIAHVEKSPSIKEIVLTGGDPF-LNRSNMAAAIDGLMGIDHVQSL 285 Query: 179 RFHSRVPIVDPQRI---NPELIQCLKE-------AGKPVYIAIHANHPYEFSEEAIAAIS 228 R +R P+ + LK+ GK + IA H HP E S E++ I+ Sbjct: 286 RLATRSLAYYPELFLGKGEWYLNYLKQKNLELQLHGKRMEIATHFIHPDEVSPESLGIIT 345 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTI 287 L +GI + Q+ L+ ND L L R + +Y++ G S + + Sbjct: 346 ELVKSGIAVYVQTPFLQHCNDTGPELQKLFRLLRGAGAEMHYIYIPCSPIHGNSVYWSPL 405 Query: 288 EEGQKIVASLKEKISGLCQPFYILDLPGGY 317 +G I L+ +S P P G Sbjct: 406 SDGIDIAEYLRAHLSDRSVPKICTATPIGK 435 Score = 86.7 bits (214), Expect = 5e-15, Method: Composition-based stats. Identities = 49/229 (21%), Positives = 88/229 (38%), Gaps = 28/229 (12%) Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 EA + YI+ + I +VI L + ++ + I HV +R P+ Sbjct: 560 EADIDYIRSDTLISDVIIRTSSLLAEELHEISSLIGKIGTIDHVNAVRISLPEVNYAPES 619 Query: 192 INPELIQCLKE-------AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 I+P +IQ L + I + + +E A + RL N GI + + + LL Sbjct: 620 ISPAMIQHLASCNRLTVSNPLRLEIETWFINANQITEMHSALVRRLNNKGITVYANTPLL 679 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQ------------K 292 IND+P+ + NL + I+ ++L+ H I++ Sbjct: 680 GEINDNPDEIYNLTYAYRRAGIEFHHLYV------AGH---PIQKAWNEKHPIDMYDVVD 730 Query: 293 IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 I + ++ + SG P YIL P G + + I G+ + + Sbjct: 731 IASKIRREGSGREGPRYILQTPLGDVYYGLTSSFIHGGGDIRVKLDSYD 779 >gi|224370563|ref|YP_002604727.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum HRM2] gi|223693280|gb|ACN16563.1| putative lysine 2,3-aminomutase [Desulfobacterium autotrophicum HRM2] Length = 819 Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats. Identities = 83/375 (22%), Positives = 144/375 (38%), Gaps = 46/375 (12%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 K T + L N I E +I ++ Y + + + +A Q++P KE Sbjct: 124 KDKTQVERLANQV-IPPEDTADINQVIETYPVRFSMHTVRQMRVSKS---VACQYLPFKE 179 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 ELN + IG + + Y +R++ L CPVYCRFCFR+ S+ Sbjct: 180 ELNSV-GHTNTWIGQFHQG---LLEQMYQNRVIFLLNMTCPVYCRFCFRKHK-DSRNEKN 234 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 D A+A+++ I E++ TGGDP I + +++ ++ L+ I HV+ LR +R Sbjct: 235 PGVDDVSKAVAHVKNSPAIKEIVITGGDPFI-NRNNMERAIQELKEIDHVETLRLATRSI 293 Query: 186 IVDPQRINPELIQCLK----------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235 PQ + + L + GK + +A H HP E S ++++ IS L GI Sbjct: 294 AYYPQLFLKDNSRWLNYLKAKNLELMQKGKRIEVATHFIHPDEVSVQSLSIISDLVAGGI 353 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH-PDLAAGTSHFRLTIEEGQKIV 294 + Q+ L+G ND+ L L + + +Y++ G S + + +G + Sbjct: 354 GVYVQTPFLEGCNDNGPELVTLFQALRGAGAEIHYIYIPCSPIHGNSVYWSPLSKGIQAG 413 Query: 295 ASLKEKISGLCQPFYILDLPGGY------G---------------KVKIDTHNIKK---- 329 L+ S P P G G + + Sbjct: 414 RYLRAHASDRSIPRICTATPIGKMDWNTSGWAVEQDKENPDFIWLRTPYTPDYFNRFAPV 473 Query: 330 VGNGSYCITDHHNIV 344 + + + Sbjct: 474 ANDLEVIRRNDEGTI 488 Score = 65.5 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 36/195 (18%), Positives = 76/195 (38%), Gaps = 19/195 (9%) Query: 132 EAALAYIQEKSQIWEVIFTGG--DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 +A + YI+ + I++V+ DP+ S R++++ TL+ ++HV LR S + P Sbjct: 564 DADIDYIKSQRDIFDVVLVSKTKDPVQ-SAARIRQLATTLKEVQHVNSLRIRSLDFVHHP 622 Query: 190 QRINPELIQCLKEAG-------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSV 242 L++ L V I E + L GI Sbjct: 623 DTYTSGLVETLGRLNCLSVANPLRVEIETWVVCADELTPRQQQITQALYRRGITTYFNVA 682 Query: 243 LLKGINDDPEILANLMRTFVELRIKPYYLH------HPDLAAGTSHFRLTIEEGQKIVAS 296 L+ G+ND+ + + + T ++ ++++ + + +++ I Sbjct: 683 LITGVNDNEDEIQKIAYTSRGFGMQFHHVYLAGLEIQNRMNGENK---VKVDDIFDIATR 739 Query: 297 LKEKISGLCQPFYIL 311 ++ + SG P YI+ Sbjct: 740 VRREGSGREIPGYII 754 >gi|124003742|ref|ZP_01688590.1| conserved hypothetical protein [Microscilla marina ATCC 23134] gi|123990797|gb|EAY30264.1| conserved hypothetical protein [Microscilla marina ATCC 23134] Length = 424 Score = 208 bits (529), Expect = 1e-51, Method: Composition-based stats. Identities = 78/346 (22%), Positives = 137/346 (39%), Gaps = 47/346 (13%) Query: 10 SAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHN-PNDPIARQFIPQKE-- 65 S + + K Q D+ +SN + + + LI+ N DP+ R K Sbjct: 10 SFKKTKYYGRLSKAQQDDFDLLSNIFYFKTNNYVLDQLIDWDNLETDPLFRLNFLHKNVL 69 Query: 66 -------------------------ELNILPEEREDPIGDN-----NHSPLKGIVHRYPD 95 EL + P + +KG+ + + Sbjct: 70 SEADYQQLLSLYQAGASIEVLQPFIELIRKKTTPQIPYDEKCFPTAGGERIKGLYRSFNN 129 Query: 96 RILLK---LLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 I L +L C YC +CFR S+ + S KD + + Y++ +I E +FTG Sbjct: 130 VISLFPDPMLKTCHAYCSYCFRWIAFNNSEVQSYTSYKDPQTPVTYLKANPEINETLFTG 189 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP--------ELIQCLKEA 203 DPL L+ ++++ + L I V +RF+++ P R EL + + + Sbjct: 190 ADPLTLTAAKIKEYIDPLLTIDSVTTIRFNTKALTWWPFRFTTDKDAKNILELFKHIVAS 249 Query: 204 GKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 G+ + H H E + I A+ + G ++ Q +++GIND E NL V Sbjct: 250 GRTLTFCAHLTHVKELQNDNVIEAVKNIQATGAKIICQGPVVEGINDTIEDWVNLWSQEV 309 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 L ++PYY+ + FR+ + + I ++++ GL QPF Sbjct: 310 ALGLQPYYMFVELNHNAEASFRIPLAKAVHIFQEAEKRVKGLQQPF 355 >gi|163784748|ref|ZP_02179553.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1] gi|159879982|gb|EDP73681.1| hypothetical protein HG1285_04843 [Hydrogenivirga sp. 128-5-R1-1] Length = 250 Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats. Identities = 44/198 (22%), Positives = 89/198 (44%), Gaps = 13/198 (6%) Query: 154 PLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINP-----ELIQCLKE---A 203 PLI+ L++ ++ + I H++ +R ++ P R EL+ K+ Sbjct: 1 PLIMKTHVLKQYIEPILEANIPHLKTIRIGTKALGFWPYRFLTDNDAQELLDLFKKIVDK 60 Query: 204 GKPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 G + H NH E ++E A+ ++ G ++ +QS +L+ IND+P++ A + + V Sbjct: 61 GYHLAYMAHFNHYKELETDEVKEAVQKIRETGAVIRTQSPILRHINDNPDVWAKMWKEQV 120 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 + + PYY+ +F + I +I +K+SGL + + GK++I Sbjct: 121 KQGMIPYYMFMARDTGAQHYFGVPIVRAWEIFREAYQKVSGLARTVKGPSMSATPGKIRI 180 Query: 323 DTHNIKKVGNGSYCITDH 340 + ++ Y + D Sbjct: 181 L--GVSEINGKKYIVLDF 196 >gi|295401597|ref|ZP_06811565.1| lysine 2,3-aminomutase YodO family protein [Geobacillus thermoglucosidasius C56-YS93] gi|294976364|gb|EFG51974.1| lysine 2,3-aminomutase YodO family protein [Geobacillus thermoglucosidasius C56-YS93] Length = 218 Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats. Identities = 64/178 (35%), Positives = 100/178 (56%), Gaps = 11/178 (6%) Query: 169 LRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAG---KPVYIAIHANHPYEFSEEA 223 +R I HV+I+RF S++P+ +P RI + EL+ ++ K +Y+ H NHP E +EEA Sbjct: 1 MRAIDHVKIIRFGSKLPVFNPMRIYEDQELLDLFRQYSTPEKRIYVMAHVNHPREITEEA 60 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF 283 A L +AG+I+++Q+ +LKGINDDPE+LA L+ + PYY AG S F Sbjct: 61 RKAFQALHDAGVIVVNQTPILKGINDDPEVLAELLDKLSWAGVTPYYFFVNRPVAGNSDF 120 Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHH 341 LT+E+ +IV K + SGL + ++ + GK++I + NG + H Sbjct: 121 VLTLEKVYQIVEQAKARTSGLGKRVRLV-MSHSSGKIEI-----LAIENGKAYLKYHQ 172 >gi|213416979|ref|ZP_03350123.1| hypothetical protein Salmonentericaenterica_03062 [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 141 Score = 196 bits (498), Expect = 5e-48, Method: Composition-based stats. Identities = 46/137 (33%), Positives = 72/137 (52%) Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 P RI EL+ ++ + + H NH E E A+ +L + G+ LL+QSVLL+G+N Sbjct: 1 PARITDELVARFDQSCLQILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVN 60 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 D+ + LANL + + PYYLH D G +HF +T +E ++I+ L +SG P Sbjct: 61 DNAQTLANLSNALFDAGVMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPR 120 Query: 309 YILDLPGGYGKVKIDTH 325 ++ G K +D Sbjct: 121 LAREIGGEPSKTPLDLQ 137 >gi|289665700|ref|ZP_06487281.1| hypothetical protein XcampvN_22139 [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 217 Score = 192 bits (489), Expect = 6e-47, Method: Composition-based stats. Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 3/198 (1%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + + L + + + + + + + + +DP+ RQ Sbjct: 22 WQQQWRDAVRDPRVLLEQLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E+ +P D +GD G++ +Y R LL C V+CR+CFRR Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +++ + A A I I EV+ +GGDPL L+ +L ++ L I H++ LR Sbjct: 142 AEE--TAARDGWREAGAAIAADPGIDEVLLSGGDPLSLATPKLAELTDALAAIPHLKRLR 199 Query: 180 FHSRVPIVDPQRINPELI 197 HSR+PIV P+R++ L+ Sbjct: 200 IHSRLPIVLPERVDAPLL 217 >gi|290474686|ref|YP_003467566.1| Arginine aminomutase (fragment) [Xenorhabdus bovienii SS-2004] gi|289173999|emb|CBJ80786.1| Arginine aminomutase, putative (fragment) [Xenorhabdus bovienii SS-2004] Length = 244 Score = 189 bits (480), Expect = 7e-46, Method: Composition-based stats. Identities = 69/213 (32%), Positives = 111/213 (52%), Gaps = 12/213 (5%) Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + EVI +GGDPL+L+ +L + L ++R I+ ++R HSR +P RI LI+ LK+ Sbjct: 31 SVEEVILSGGDPLMLTDNKLNESLASIREIRDDLLIRIHSRALTFNPYRITDALIETLKK 90 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 +H HP+E SEE A+ R+ +A I+ S L+GIND+ + L L Sbjct: 91 YRIN-AFGVHVCHPFELSEEFQTAVRRIQSAVPIVFSNMPFLRGINDNEKTLHKLFIDLY 149 Query: 263 ELRIKPYYLHHPDL-AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK-- 319 + +KPYYL+H + G+S ++ +I + I++ LK +IS + P Y+ LP GK Sbjct: 150 RMGVKPYYLYHFMPFSPGSSEYKASINDAISIMSKLKRRISNIALPEYV--LPHMKGKFT 207 Query: 320 VKIDTH-----NIKKV-GNGSYCITDHHNIVHD 346 V + TH + + G Y + N + Sbjct: 208 VPLFTHPQEMPYFETLNGKRYYRFINWQNEQCE 240 >gi|331005683|ref|ZP_08329048.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989] gi|330420506|gb|EGG94807.1| Lysine 2,3-aminomutase [gamma proteobacterium IMCC1989] Length = 146 Score = 188 bits (479), Expect = 1e-45, Method: Composition-based stats. Identities = 49/146 (33%), Positives = 78/146 (53%), Gaps = 1/146 (0%) Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-SEEAIAAISRLANAGII 236 +R HSR+P+V P RI E I+ + + + +H NH E + AIS++ NAGI Sbjct: 1 MRIHSRLPVVIPDRITAESIEWMSQTRLATVMVLHINHAQELKNGILRTAISQMKNAGIT 60 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 +L+QSVLLKGIND + A L T + + PYYLH D G++HF + + + + Sbjct: 61 VLNQSVLLKGINDTLDTQAELSETLFDAGVLPYYLHVLDKVQGSAHFDTMDDRAKTLHKA 120 Query: 297 LKEKISGLCQPFYILDLPGGYGKVKI 322 + K+ G P + ++ K+ + Sbjct: 121 MTAKLPGYLVPKLVREVAHEPSKITV 146 >gi|212694782|ref|ZP_03302910.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855] gi|212662636|gb|EEB23210.1| hypothetical protein BACDOR_04316 [Bacteroides dorei DSM 17855] Length = 703 Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 124/320 (38%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61 + S +L N + +E + + + +TP +L+NP +D R +I Sbjct: 201 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 260 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 PQ E NI E+ED + D + I RYPD +L + C Sbjct: 261 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y + +Q+ +++ TGGD L+ Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380 Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + H +Q +R SR+P+ P RIN EL+ L Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA AI ++ AG + +Q V + Sbjct: 441 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500 Query: 253 ILANLMRTFVELRIKPYYLH 272 A L + L + YY Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519 >gi|237727246|ref|ZP_04557727.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229434102|gb|EEO44179.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 703 Score = 186 bits (474), Expect = 3e-45, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 124/320 (38%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61 + S +L N + +E + + + +TP +L+NP +D R +I Sbjct: 201 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 260 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 PQ E NI E+ED + D + I RYPD +L + C Sbjct: 261 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y + +Q+ +++ TGGD L+ Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380 Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + H +Q +R SR+P+ P RIN EL+ L Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA AI ++ AG + +Q V + Sbjct: 441 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500 Query: 253 ILANLMRTFVELRIKPYYLH 272 A L + L + YY Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519 >gi|265750535|ref|ZP_06086598.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263237431|gb|EEZ22881.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 703 Score = 186 bits (474), Expect = 4e-45, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 123/320 (38%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61 + S +L N + +E + + + +TP +L+NP +D R +I Sbjct: 201 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 260 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 PQ E NI E+ED + D + I RYPD +L + C Sbjct: 261 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y + +Q+ +++ TGGD L+ Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+P+ P RIN EL+ L Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLQRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA AI ++ AG + +Q V + Sbjct: 441 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500 Query: 253 ILANLMRTFVELRIKPYYLH 272 A L + L + YY Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519 >gi|325970018|ref|YP_004246209.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy] gi|324025256|gb|ADY12015.1| hypothetical protein SpiBuddy_0173 [Spirochaeta sp. Buddy] Length = 710 Score = 186 bits (474), Expect = 4e-45, Method: Composition-based stats. Identities = 66/326 (20%), Positives = 124/326 (38%), Gaps = 59/326 (18%) Query: 5 HKTLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANLIN------PHNPN-D 54 H + SA DL + ++ + ++E I TP +LI+ NP D Sbjct: 222 HFAIRSADDLNLYLAHSMDEKTLSLMREAQAKGIPIFATPYFLSLIDTRPLEKRENPRSD 281 Query: 55 PIARQFIPQKEEL-----NILPEEREDPI--GDNNHS----PLKGIVHRYPDRILLK--- 100 R ++ ++L +I+ E+ED G+ N + P + RYP+ + Sbjct: 282 EAIRSYLFYSKDLVQEFGSIVAWEKEDIARPGEPNAAGWLLPSHNVHRRYPNVAIFIPDT 341 Query: 101 LLHVCPVYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTG 151 + C C +C R + + K + L Y + +W+++ TG Sbjct: 342 MGRACGGLCSYCQRMYDFQGGRFNFELEKLRPKKSWQEQLEQNMEYFRNDPYLWDILITG 401 Query: 152 GDPLILSHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINP 194 GD + S K L+ +L + + ++ +R +++P+ PQR+ Sbjct: 402 GDAFMSSVKSLKNILDAVLAMARQKIEDNEARSPEEQYAPMRRVRLGTKIPVYLPQRVTA 461 Query: 195 ELIQCLKEAGKPVYIA--------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 EL+Q L + K + H + E + E A+ RL +G + +Q V Sbjct: 462 ELVQVLADFKKKAALVGIDQCVVQTHVSSAMEITPETRKAVKRLLASGWAVTNQEVFTVA 521 Query: 247 INDDPEILANLMRTFVELRIKPYYLH 272 + A L + ++ + PYY Sbjct: 522 ASRRGHS-AKLRKVLNDIGVLPYYNF 546 >gi|237710948|ref|ZP_04541429.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229454792|gb|EEO60513.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 697 Score = 186 bits (473), Expect = 4e-45, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 124/320 (38%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61 + S +L N + +E + + + +TP +L+NP +D R +I Sbjct: 195 AIKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDTAIRSYI 254 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 PQ E NI E+ED + D + I RYPD +L + C Sbjct: 255 LYSPQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 314 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y + +Q+ +++ TGGD L+ Sbjct: 315 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 374 Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + H +Q +R SR+P+ P RIN EL+ L Sbjct: 375 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 434 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA AI ++ AG + +Q V + Sbjct: 435 REFKEKASAVGVRQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 494 Query: 253 ILANLMRTFVELRIKPYYLH 272 A L + L + YY Sbjct: 495 T-AKLRKVLNGLGVLCYYTF 513 >gi|254883725|ref|ZP_05256435.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|254836518|gb|EET16827.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] Length = 703 Score = 186 bits (472), Expect = 6e-45, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 123/320 (38%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61 + S +L N + +E + + + +TP +L+NP +D R +I Sbjct: 201 AVKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 260 Query: 62 PQKEEL-----NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 +L NI E+ED + D + I RYPD +L + C Sbjct: 261 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y + +Q+ +++ TGGD L+ Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+P+ P RIN EL++ L Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLQRAEGEKYAELQRVRLGSRLPVYLPMRINDELLEIL 440 Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA AI ++ AG + +Q V + Sbjct: 441 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500 Query: 253 ILANLMRTFVELRIKPYYLH 272 A L + L + YY Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519 >gi|319643449|ref|ZP_07998072.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A] gi|317384854|gb|EFV65810.1| hypothetical protein HMPREF9011_03673 [Bacteroides sp. 3_1_40A] Length = 576 Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 123/320 (38%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61 + S +L N + +E + + + +TP +L+NP +D R +I Sbjct: 74 AVKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 133 Query: 62 PQKEEL-----NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 +L NI E+ED + D + I RYPD +L + C Sbjct: 134 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 193 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y + +Q+ +++ TGGD L+ Sbjct: 194 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 253 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+P+ P RIN EL++ L Sbjct: 254 QNKTLRNILEAVYKMAVRKRNANLQRAEGEKYAELQRVRLGSRLPVYLPMRINDELLEIL 313 Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA AI ++ AG + +Q V + Sbjct: 314 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 373 Query: 253 ILANLMRTFVELRIKPYYLH 272 A L + L + YY Sbjct: 374 T-AKLRKVLNGLGVLCYYTF 392 >gi|294777091|ref|ZP_06742548.1| KamA family protein [Bacteroides vulgatus PC510] gi|294448960|gb|EFG17503.1| KamA family protein [Bacteroides vulgatus PC510] Length = 703 Score = 185 bits (471), Expect = 7e-45, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61 + S +L N + +E + + + +TP +L+NP +D R +I Sbjct: 201 AVKSPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 260 Query: 62 PQKEEL-----NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 +L NI E+ED + D + I RYPD +L + C Sbjct: 261 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y + +Q+ +++ TGGD L+ Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQLRDILITGGDALMS 380 Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + H +Q +R SR+P+ P RIN EL+ L Sbjct: 381 QNKTLRNILEAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLDIL 440 Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA AI ++ AG + +Q V + Sbjct: 441 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500 Query: 253 ILANLMRTFVELRIKPYYLH 272 A L + L + YY Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519 >gi|229004623|ref|ZP_04162361.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4] gi|228756664|gb|EEM05971.1| L-lysine 2,3-aminomutase [Bacillus mycoides Rock1-4] Length = 233 Score = 183 bits (466), Expect = 3e-44, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 81/180 (45%), Gaps = 11/180 (6%) Query: 155 LILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRI-----NPELIQCLKE---AG 204 +I++ ++ + L H++ +R ++ P R + EL+Q K+ +G Sbjct: 1 MIMNASKIMHYISPLLEPEFDHIRNIRIGTKALTYWPNRFISDSDSEELLQFFKKIIDSG 60 Query: 205 KPVYIAIHANHPYEF-SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 K + I H H E + AI ++ + G I+ SQS ++ IN++PE L V+ Sbjct: 61 KSLAIMAHFTHWRELEAPLTQVAIKKIRDVGAIIRSQSPIIGHINNNPETWKILWEKQVQ 120 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 L I PYY+ +F++ + E I ++SGL + + YGK+++ Sbjct: 121 LGIIPYYMFVERDTGSNRYFQVPLIEAYNIYRDAISRVSGLARTARGPVMSTTYGKIEVQ 180 >gi|71277819|ref|YP_270271.1| hypothetical protein CPS_3603 [Colwellia psychrerythraea 34H] gi|71143559|gb|AAZ24032.1| conserved domain protein [Colwellia psychrerythraea 34H] Length = 555 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 68/374 (18%), Positives = 133/374 (35%), Gaps = 59/374 (15%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEE 66 ++ AN I I+E + Y T N I+ N D + + +PQ Sbjct: 110 FRRVVEILVANNIDIGDIEERELFIEVYRFLATKHSLNSIDWTNFYEDSVFQLVMPQPNM 169 Query: 67 LN--ILPEEREDPIGD---------NNHSP---------------------LKGIVHRYP 94 +N + E + + SP L G H+YP Sbjct: 170 INKITVAEYLAASVAEKKVIVEEYQEKTSPHDGNQQLNKPWFENEQGEIEFLDGSQHKYP 229 Query: 95 DRILL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 L+ K C +C +CFR V + + K+ + Y++ ++ +++ TGG Sbjct: 230 QCQLIFDKTTQNCFSFCTYCFRHAQVRGDEDMFI-QKEIDQIHRYLKVHEEVTDMLITGG 288 Query: 153 DPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINP-------ELIQCLKE 202 D + R ++ + L R + H++ +R +R P+ I + + + Sbjct: 289 DGGYMPASRFEQYVTPLLEDRDLLHIKTVRLATRALTFQPEMILSSKYDKMLAVFDKMHD 348 Query: 203 AGKPVYIAIHANHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN------------D 249 G + H + P E + IAAI RL G+++ SQS ++ I+ Sbjct: 349 NGIQLAWMAHFSTPRELLNPTTIAAIRRLQRHGVVIRSQSPMMNHISLFENKDGSIDIDR 408 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY 309 + +L + I + ++ +F + +I + ++ + +P Sbjct: 409 SAQNWIDLSNILGTMLISFHSMYCARPTGEHHYFTAPLSAVSQIFDKIYRELPSINRPSR 468 Query: 310 ILDLPGGYGKVKID 323 L + GK+ I Sbjct: 469 HLSMTTSAGKISIM 482 >gi|150005257|ref|YP_001300001.1| hypothetical protein BVU_2729 [Bacteroides vulgatus ATCC 8482] gi|149933681|gb|ABR40379.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482] Length = 703 Score = 183 bits (465), Expect = 4e-44, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61 + + +L N + +E + + + +TP +L+NP +D R +I Sbjct: 201 AVKNPTELNRMLGNSLSEETLQLYHKARKKGMPVFITPYYLSLLNPTGKGYDDEAIRSYI 260 Query: 62 PQKEEL-----NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 +L NI E+ED + D + I RYPD +L + C Sbjct: 261 LYSSQLVETYGNIHAWEKEDAVEDGKPNAAGWLLPDGHNIHRRYPDVAILIPDSMGRACG 320 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y + +Q +++ TGGD L+ Sbjct: 321 GLCASCQRMYDFQSERLNFNFEELKPKESWDKRLRKLMEYFENDTQFRDILITGGDALMS 380 Query: 158 SHKRLQKVLKTLRYIK--------H---------VQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +LK + + H +Q +R SR+P+ P RIN EL++ L Sbjct: 381 QNKTLRNILKAVYKMAVRKRNANLHRAEGEKYAELQRVRLGSRLPVYLPMRINDELLEIL 440 Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA AI ++ AG + +Q V + Sbjct: 441 REFKEKASAVGVSQFLIQTHFQTPLEVTPEAREAIRKILAAGWTITNQLVYNVAASRRGH 500 Query: 253 ILANLMRTFVELRIKPYYLH 272 A L + L + YY Sbjct: 501 T-AKLRKVLNGLGVLCYYTF 519 >gi|167624868|ref|YP_001675162.1| hypothetical protein Shal_2954 [Shewanella halifaxensis HAW-EB4] gi|167354890|gb|ABZ77503.1| conserved hypothetical protein [Shewanella halifaxensis HAW-EB4] Length = 537 Score = 180 bits (458), Expect = 2e-43, Method: Composition-based stats. Identities = 69/378 (18%), Positives = 131/378 (34%), Gaps = 70/378 (18%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELN------------- 68 ++ + E+ Y T N IN + P D + + PQ +N Sbjct: 108 DEREFFVEV---YRFLATRHSLNSINWDDYPTDSVFQLVFPQPGMINAETTQAYIDASDP 164 Query: 69 -----------------------ILPEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLH 103 P D + L G H+YP L+ K Sbjct: 165 KARTQVAIEYMEKTNPHDGNQQLNKPWFVND---EGVLEFLDGSQHKYPQCQLVFDKTTQ 221 Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C +C +CFR V + + KD Y++ ++ +++ TGGD + RL+ Sbjct: 222 NCFSFCTYCFRHAQVRGDEDMFI-QKDIAQLHEYLRRHKEVTDILITGGDGGYMPMSRLK 280 Query: 164 KVLKTLRYIK---HVQILRFHSRVPIVDP-------QRINPELIQCLKEAGKPVYIAIHA 213 + + L HV+ +R +R P + EL +++ G + H Sbjct: 281 QYVMPLIEDPSLLHVKNVRLATRALTFQPEIVLTEKYQPMLELFDTMRDNGVQLAWMAHF 340 Query: 214 NHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN------------DDPEILANLMRT 260 + P E + +AAI RL N G+ + SQS ++ I+ + +L Sbjct: 341 STPRELLNPSTLAAIRRLQNHGVNIRSQSPMMNHISLFMDDKGGVDVERSSQSWIDLSNI 400 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 L I + ++ ++ + + KI + ++ + +P + + GK+ Sbjct: 401 LGMLCIGFHSMYCARPTGEHHYYTAPLADMSKIFNRIYRSLASINRPSRHISMTISAGKL 460 Query: 321 KIDTHNIKKVGNGSYCIT 338 I +I G + + Sbjct: 461 AILGTSIVN-GEKCFALQ 477 >gi|319901443|ref|YP_004161171.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108] gi|319416474|gb|ADV43585.1| L-lysine 2,3-aminomutase [Bacteroides helcogenes P 36-108] Length = 697 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 123/320 (38%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + + TP +L+N P+ +D R +I Sbjct: 201 AIKSPTELNRFLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTPNGYDDEALRSYI 260 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 PQ E I ERED + + + I RYP+ +L + C Sbjct: 261 LYSPQLVETYGQIHAWEREDIVEEGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320 Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S + T+ + E + Y +E +Q+ +++ TGGD L+ Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLHPKESWEKKLRRLMNYFEEDAQLRDILITGGDALMS 380 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L + + +Q +R SR+P P RIN EL++ L Sbjct: 381 QNKTLRNILDAVYRMAARKRKANEERPEGEKYAELQRIRLGSRLPAYLPMRINDELVEIL 440 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 K+ + I H P E + EA I +L +AG ++ +Q V + Sbjct: 441 KKFKEKASTIGIRQFIIQTHFQTPLEVTPEAAKGIHKLLSAGWLIDNQLVYNVAASRRGH 500 Query: 253 ILANLMRTFVELRIKPYYLH 272 A L + +L + YY Sbjct: 501 T-ARLRQILNQLGVVCYYTF 519 >gi|1369901|dbj|BAA12848.1| yjeK [Buchnera aphidicola] gi|2827006|gb|AAC38098.1| 39-kDa hypothetical protein [Buchnera aphidicola] Length = 144 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 55/140 (39%), Positives = 78/140 (55%) Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 H+R+PIV P RI +L Q + + I H NHP E +E+ ++ +L + +ILL+ Sbjct: 1 IHTRLPIVIPNRITSDLCQIFSNSVLKIIIVTHINHPQEINEQLSDSLLKLKKSNVILLN 60 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 QSVLLK IND+ ILA L E I PYYLH D GTSHF ++ ++ + I++ L + Sbjct: 61 QSVLLKNINDNAIILAELSSRLCENNIIPYYLHILDKVKGTSHFLVSNKKAKSIISDLMK 120 Query: 300 KISGLCQPFYILDLPGGYGK 319 ISG P + D K Sbjct: 121 MISGFLVPRLVFDNGSKDNK 140 >gi|157376843|ref|YP_001475443.1| hypothetical protein Ssed_3711 [Shewanella sediminis HAW-EB3] gi|157319217|gb|ABV38315.1| conserved hypothetical protein [Shewanella sediminis HAW-EB3] Length = 493 Score = 180 bits (457), Expect = 3e-43, Method: Composition-based stats. Identities = 66/378 (17%), Positives = 132/378 (34%), Gaps = 70/378 (18%) Query: 23 EQIDEIKEISNHYSIALTPVIANLINPHN-PNDPIARQFIPQKEELNIL----------- 70 ++ + E+ Y T N IN + P D + + PQ ++ Sbjct: 66 DERELFVEV---YRFLATRHTLNSINWDDYPTDSVFQLVFPQPGMIDEQTTQQYVGSPDA 122 Query: 71 -------------------------PEEREDPIGDNNHSPLKGIVHRYPDRILL--KLLH 103 P D + L G H+YP L+ K Sbjct: 123 KARTQVAIDYMEKTNPHDGNQQLNKPWFVND---EGVLEFLDGSQHKYPQCQLVFDKTTQ 179 Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C +C +CFR V + + KD Y++ ++ +++ TGGD + RL+ Sbjct: 180 NCFSFCTYCFRHAQVRGDEDMFI-QKDIAQLHEYLRRHPEVTDILITGGDGGYMPVSRLR 238 Query: 164 KVLKTLRYIK---HVQILRFHSRVPIVDPQRINP-------ELIQCLKEAGKPVYIAIHA 213 + + L HV+ +R +R P+ + EL +++ G + H Sbjct: 239 QYVMPLIEDPSLLHVKNVRLATRALTFQPEMVLTEKYEPMLELFDTMRDNGVQLAWMAHF 298 Query: 214 NHPYE-FSEEAIAAISRLANAGIILLSQSVLLKGIN------------DDPEILANLMRT 260 + P E + IAAI RL N G+ + SQS ++ I+ + +L Sbjct: 299 STPRELLNPSTIAAIRRLQNHGVNIRSQSPMMNHISLFKDEAGNVDVERSSQNWIDLATI 358 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 + + + ++ ++ + + KI + ++ + +P + + GK+ Sbjct: 359 LGMMCVGFHSMYCARPTGEHHYYTAPLADMGKIFNRIYRSLASINRPSRHISMTISAGKL 418 Query: 321 KIDTHNIKKVGNGSYCIT 338 I ++ G + + Sbjct: 419 AILGTSVVN-GEKCFALQ 435 >gi|330995846|ref|ZP_08319742.1| KamA family protein [Paraprevotella xylaniphila YIT 11841] gi|329574377|gb|EGG55948.1| KamA family protein [Paraprevotella xylaniphila YIT 11841] Length = 707 Score = 179 bits (456), Expect = 4e-43, Method: Composition-based stats. Identities = 69/371 (18%), Positives = 137/371 (36%), Gaps = 61/371 (16%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61 + SA +L + E + ++ + +TP +L+NP +D R ++ Sbjct: 200 AVKSAAELNRMLGGTLSGETMRVYQQAQEKGIPVFVTPYYLSLLNPTGKGYDDAAIRSYV 259 Query: 62 PQKEELN-----ILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 L I ERED + + + I RYP+ +L + C Sbjct: 260 IYSSRLVETFGGIRAWEREDIVEEGKPNVAGWLLPGGHNIHRRYPEVAILIPDTMGRACG 319 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + ++ + Y + +QI +++ TGGD L+ Sbjct: 320 GLCASCQRMYDFQSRRLNFELEKLKPKENWNTRLRKLMDYFEHDTQIRDILITGGDALMS 379 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 + L+ +L + + +Q +R +R+P+ P R++ EL+ L Sbjct: 380 RNATLRNILDAVCKMAVRKRQANLSRPDGEKYAELQRVRLGTRLPVYLPMRVDDELLDIL 439 Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 ++ + +++ H P E + E+ AI R+ + G + +Q V + Sbjct: 440 RDFRQKAAEAGITQLFVQTHFQSPLEVTPESREAIRRILSTGWAVTNQLVYNVAASRRGH 499 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP----F 308 A L + L + YY + ++ + + + S +EK G P Sbjct: 500 T-AKLRKVLNSLGVICYYTFT--VKGFEENYEVFAPNARSLQESAEEKAWGRLAPEAEHD 556 Query: 309 YILDLPGGYGK 319 ++ L G K Sbjct: 557 FLESLGGAPDK 567 >gi|332877293|ref|ZP_08445041.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684676|gb|EGJ57525.1| KamA family protein [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 707 Score = 179 bits (455), Expect = 6e-43, Method: Composition-based stats. Identities = 69/371 (18%), Positives = 137/371 (36%), Gaps = 61/371 (16%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61 + SA +L + E + ++ + +TP +L+NP +D R ++ Sbjct: 200 AVKSAAELNRMLDGTLSGETLRIYQQAQEKGIPVFVTPYYLSLLNPTGKGYDDAAIRSYV 259 Query: 62 PQKEELN-----ILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 L I ERED + + + I RYP+ +L + C Sbjct: 260 IYSSRLVETFGGIRAWEREDIVEEGKPNVAGWLLPGGHNIHRRYPEVAILIPDTMGRACG 319 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + ++ + Y + +QI +++ TGGD L+ Sbjct: 320 GLCASCQRMYDFQSRRLNFELEKLKPKENWNTRLRKLMDYFEHDTQIRDILITGGDALMS 379 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 + L+ +L + + +Q +R +R+P+ P R++ EL+ L Sbjct: 380 RNATLRNILDAVCKMAVRKRQANLSRPDGEKYAELQRVRLGTRLPVYLPMRVDDELLDIL 439 Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 ++ + +++ H P E + E+ AI R+ + G + +Q V + Sbjct: 440 RDFRQKAAEAGITQLFVQTHFQSPLEVTPESREAIRRILSTGWAVTNQLVYNVAASRRGH 499 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQP----F 308 A L + L + YY + ++ + + + S +EK G P Sbjct: 500 T-AKLRKVLNSLGVICYYTFT--VKGFEENYEVFAPNARSLQESAEEKAWGRLAPEAEHD 556 Query: 309 YILDLPGGYGK 319 ++ L G K Sbjct: 557 FLESLDGAPNK 567 >gi|329961990|ref|ZP_08300001.1| KamA family protein [Bacteroides fluxus YIT 12057] gi|328530638|gb|EGF57496.1| KamA family protein [Bacteroides fluxus YIT 12057] Length = 698 Score = 179 bits (454), Expect = 7e-43, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 120/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61 + S +L N + E + + + TP +L++ +D R +I Sbjct: 201 AVKSPAELNRFLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLDCTGSGYDDEALRSYI 260 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 PQ E I ERED + + + I RYP+ +L + C Sbjct: 261 LYSPQLVETYGQIHAWEREDTVEEGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320 Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S + T+ + E +AY +E +Q+ +++ TGGD L+ Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKESWEKKLRRLMAYFEEDAQLRDILITGGDALMS 380 Query: 158 SHKRLQKVLKTLRYIKH-----------------VQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L + + +Q +R SR+P P RIN EL++ L Sbjct: 381 QNKTLRNILDAVYRMASRKRKANLERPEGEKYAELQRIRLGSRLPAYLPMRINDELVEIL 440 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA I +L AG ++ +Q V + Sbjct: 441 REFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + +L + YY Sbjct: 501 T-TRLRQILNQLGVVCYYTF 519 >gi|213584604|ref|ZP_03366430.1| hypothetical protein SentesTyph_26615 [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] Length = 125 Score = 177 bits (451), Expect = 2e-42, Method: Composition-based stats. Identities = 41/120 (34%), Positives = 64/120 (53%) Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 + + H NH E E A+ +L + G+ LL+QSVLL+G+ND+ + LANL + Sbjct: 2 QILLVNHINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLANLSNALFDAG 61 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 + PYYLH D G +HF +T +E ++I+ L +SG P ++ G K +D Sbjct: 62 VMPYYLHVLDKVQGAAHFMVTDDEARQIMRELLTLVSGYMVPRLAREIGGEPSKTPLDLQ 121 >gi|255690900|ref|ZP_05414575.1| KamA family protein [Bacteroides finegoldii DSM 17565] gi|260623540|gb|EEX46411.1| KamA family protein [Bacteroides finegoldii DSM 17565] Length = 713 Score = 176 bits (448), Expect = 3e-42, Method: Composition-based stats. Identities = 75/320 (23%), Positives = 121/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEI-SNHYSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLHRARKKRMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAEKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157 C C R S++ T+ + E L Y +E +Q+ +++ TGGD L+ Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWERKLRRLMTYFEEDTQLRDILITGGDALMS 385 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K LQ +L + + +Q +R SR+P P RIN EL++ L Sbjct: 386 QNKTLQHILDAVYRMAVRKQKANLDRPEGEKYAELQRVRLGSRLPAYLPMRINDELVEIL 445 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 446 REFKEKASAAGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 506 T-TRLRQVLNSLGVMCYYTF 524 >gi|29349882|ref|NP_813385.1| hypothetical protein BT_4474 [Bacteroides thetaiotaomicron VPI-5482] gi|29341793|gb|AAO79579.1| conserved hypothetical protein [Bacteroides thetaiotaomicron VPI-5482] Length = 720 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 120/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 208 AVKSPAELNRFLGNSLSSETMYLLNRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ T+ + + + Y ++ +Q+ +++ TGGD L+ Sbjct: 328 GLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRRLMTYFEQDTQLRDILITGGDALMS 387 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+ P RIN EL+ L Sbjct: 388 QNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVDIL 447 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 448 REFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 508 T-TRLRQVLNSLGVVCYYTF 526 >gi|298384138|ref|ZP_06993699.1| KamA family protein [Bacteroides sp. 1_1_14] gi|298263742|gb|EFI06605.1| KamA family protein [Bacteroides sp. 1_1_14] Length = 718 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 120/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 206 AVKSPAELNRFLGNSLSSETMYLLNRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ T+ + + + Y ++ +Q+ +++ TGGD L+ Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRRLMTYFEQDTQLRDILITGGDALMS 385 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+ P RIN EL+ L Sbjct: 386 QNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVDIL 445 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 446 REFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524 >gi|253569751|ref|ZP_04847160.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251840132|gb|EES68214.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 717 Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 120/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 206 AVKSPAELNRFLGNSLSSETMYLLNRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ T+ + + + Y ++ +Q+ +++ TGGD L+ Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWDSKLRRLMTYFEQDTQLRDILITGGDALMS 385 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+ P RIN EL+ L Sbjct: 386 QNKTLKNILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVDIL 445 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 446 REFKEKASAVGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524 >gi|298375250|ref|ZP_06985207.1| KamA family protein [Bacteroides sp. 3_1_19] gi|298267750|gb|EFI09406.1| KamA family protein [Bacteroides sp. 3_1_19] Length = 704 Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%) Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61 + S +L + E + + +TP +L I +D R +I Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268 Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 EL E+ED + + + I RYP+ +L + C Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y +E +Q+ +++ TGGD L+ Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 + L+K+L+ + + +Q +R SR+ P R+ EL+ L Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRSEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448 Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + YI H P E + EA AI + AG + +Q V + Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302 A L +T L + YY + ++ + +++E ++ + ++ Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559 >gi|256839551|ref|ZP_05545060.1| conserved hypothetical protein [Parabacteroides sp. D13] gi|256738481|gb|EEU51806.1| conserved hypothetical protein [Parabacteroides sp. D13] Length = 704 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%) Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61 + S +L + E + + +TP +L I +D R +I Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268 Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 EL E+ED + + + I RYP+ +L + C Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y +E +Q+ +++ TGGD L+ Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 + L+K+L+ + + +Q +R SR+ P R+ EL+ L Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRSEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448 Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + YI H P E + EA AI + AG + +Q V + Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302 A L +T L + YY + ++ + +++E ++ + ++ Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559 >gi|255011024|ref|ZP_05283150.1| hypothetical protein Bfra3_17927 [Bacteroides fragilis 3_1_12] gi|313148829|ref|ZP_07811022.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313137596|gb|EFR54956.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 699 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 119/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPHN--PNDPIARQFI 61 + + +L N + E + + TP +L+N + ND R +I Sbjct: 203 AIKTPAELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTNGEGYNDEAIRSYI 262 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI ERED + + I RYP+ +L + C Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + L Y +E +Q+ +++ TGGD L+ Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMTYFEEDTQLRDILITGGDALMS 382 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+ P RIN ELI+ L Sbjct: 383 QNKTLRNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + + AI ++ +AG ++ +Q V + Sbjct: 443 REFKEKASAIGMKQFIIQTHFQSPLEVTPQTREAIRKILSAGWLITNQLVYTVAASRRGH 502 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521 >gi|150007262|ref|YP_001302005.1| hypothetical protein BDI_0607 [Parabacteroides distasonis ATCC 8503] gi|149935686|gb|ABR42383.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503] Length = 704 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%) Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61 + S +L + E + + +TP +L I +D R +I Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268 Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 EL E+ED + + + I RYP+ +L + C Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y +E +Q+ +++ TGGD L+ Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 + L+K+L+ + + +Q +R SR+ P R+ EL+ L Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448 Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + YI H P E + EA AI + AG + +Q V + Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302 A L +T L + YY + ++ + +++E ++ + ++ Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559 >gi|255014113|ref|ZP_05286239.1| hypothetical protein B2_09392 [Bacteroides sp. 2_1_7] Length = 706 Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%) Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61 + S +L + E + + +TP +L I +D R +I Sbjct: 211 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 270 Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 EL E+ED + + + I RYP+ +L + C Sbjct: 271 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 330 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y +E +Q+ +++ TGGD L+ Sbjct: 331 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 390 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 + L+K+L+ + + +Q +R SR+ P R+ EL+ L Sbjct: 391 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 450 Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + YI H P E + EA AI + AG + +Q V + Sbjct: 451 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 510 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302 A L +T L + YY + ++ + +++E ++ + ++ Sbjct: 511 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 561 >gi|218260892|ref|ZP_03475966.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii DSM 18315] gi|218224314|gb|EEC96964.1| hypothetical protein PRABACTJOHN_01630 [Parabacteroides johnsonii DSM 18315] Length = 703 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 112/320 (35%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI 61 S +L + +D + +TP +L+N + +D R +I Sbjct: 208 AFKSPTELNYFLGGSLSAGTMDLLARARKKGMPFFVTPYYLSLLNTNTSGYDDATIRSYI 267 Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 EEL E+ED + + I RYP+ +L + C Sbjct: 268 LYSEELVDTYGRIKAWEKEDIVVSGQPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 327 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ ++ + + + Y +E +Q+ +++ TGGD L+ Sbjct: 328 GLCASCQRMYDFQSERLNFDFESLKPKEAWDKKLRRLMRYFEEDAQLRDILITGGDALMS 387 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 + L +L + + +Q +R SR+ P RI EL+ L Sbjct: 388 QNATLCNILDAVYKMAVRKRKANESRPKGEKYAELQRVRLGSRLLAYLPLRITDELVDIL 447 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 + I H P E + EA AI + +AG I+ +Q V + Sbjct: 448 RSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAIEAILSAGWIITNQMVYTVAASRRGH 507 Query: 253 ILANLMRTFVELRIKPYYLH 272 A L +T + + YY Sbjct: 508 A-AKLRQTLNAMGVVCYYTF 526 >gi|262382166|ref|ZP_06075304.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] gi|262297343|gb|EEY85273.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B] Length = 704 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%) Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61 + S +L + E + + +TP +L I +D R +I Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268 Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 EL E+ED + + + I RYP+ +L + C Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y +E +Q+ +++ TGGD L+ Sbjct: 329 GLCASCQRMYDFQSERLNFDFEALKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 + L+K+L+ + + +Q +R SR+ P R+ EL+ L Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448 Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + YI H P E + EA AI + AG + +Q V + Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRRGH 508 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302 A L +T L + YY + ++ + +++E ++ + ++ Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559 >gi|153809340|ref|ZP_01962008.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185] gi|149128110|gb|EDM19331.1| hypothetical protein BACCAC_03654 [Bacteroides caccae ATCC 43185] Length = 712 Score = 173 bits (440), Expect = 3e-41, Method: Composition-based stats. Identities = 72/320 (22%), Positives = 121/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWILPDGHNIHRRYPEVAILIPDTMGRACG 325 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157 C C R S++ T+ + + L Y +E +Q+ +++ TGGD L+ Sbjct: 326 GLCASCQRMYDFQSERLNFEFETLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+ P RIN EL++ L Sbjct: 386 QNKTLRHILEAVYRMAVRKQRANLERPEGEKYAELQRVRLGSRLLAYLPMRINDELVEIL 445 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524 >gi|295401598|ref|ZP_06811566.1| lysine 2,3-aminomutase YodO family protein [Geobacillus thermoglucosidasius C56-YS93] gi|294976365|gb|EFG51975.1| lysine 2,3-aminomutase YodO family protein [Geobacillus thermoglucosidasius C56-YS93] Length = 154 Score = 173 bits (439), Expect = 4e-41, Method: Composition-based stats. Identities = 53/158 (33%), Positives = 82/158 (51%), Gaps = 7/158 (4%) Query: 4 RHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQ 63 + K +T+ + + I KE+ +++K+I+N Y + NLIN +PNDPI + IP Sbjct: 3 QPKYITNIEKITQ---IPKEEREKLKKITNKYVFRVNEYYLNLINWDDPNDPIRKLVIPN 59 Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 + ELN D + + + G H+Y LL + VC YCRFCFR+ + S Sbjct: 60 EGELNE--YGSWDASDEEANYVVPGCQHKYKTTALLIVSEVCGAYCRFCFRKRLFRSDVK 117 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 +S D + YI + +I V+ TGGD LIL+ K+ Sbjct: 118 EAMS--DVTPGIEYIAQTPEINNVLLTGGDSLILATKK 153 >gi|291515343|emb|CBK64553.1| L-lysine 2,3-aminomutase [Alistipes shahii WAL 8301] Length = 699 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 69/320 (21%), Positives = 121/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYN--ANLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L A + E + + + TP +L++ +D R +I Sbjct: 203 AVKSPSELNRFLAGSLSSETMYLLSKARKKGMPFFATPYYLSLLDVTGGGYDDAAIRSYI 262 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 PQ E I ERED + + I RYP+ +L + C Sbjct: 263 LYSPQLVETYGQIRAWEREDVVEAGRPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ T+ + + + Y +E +Q+ +++ TGGD L+ Sbjct: 323 GLCASCQRMYDFQSERLNFEFETLRPKESWDHKLRRLMNYFEEDTQLRDILITGGDALMS 382 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+P P R+N EL++ L Sbjct: 383 QNKTLRNILEAVCRMAGRKRRANARRPDGEKYAELQRVRLGSRLPAYLPMRVNDELVEIL 442 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG ++ +Q V + Sbjct: 443 REFHEKASAVGVKQFVIQTHFQTPLEVTPEAEEAIRKILSAGWLITNQLVYTVAASRRGH 502 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521 >gi|60682845|ref|YP_212989.1| hypothetical protein BF3383 [Bacteroides fragilis NCTC 9343] gi|60494279|emb|CAH09074.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] Length = 699 Score = 172 bits (437), Expect = 6e-41, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61 + + +L N + E + + TP +L+N ND R +I Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI ERED + + I RYP+ +L + C Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + ++Y +E +Q+ +++ TGGD L+ Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+ P RIN ELI+ L Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + AI ++ +AG ++ +Q V + Sbjct: 443 REFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521 >gi|253565968|ref|ZP_04843422.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251945072|gb|EES85510.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] Length = 699 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61 + + +L N + E + + TP +L+N ND R +I Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI ERED + + I RYP+ +L + C Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + ++Y +E +Q+ +++ TGGD L+ Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+ P RIN ELI+ L Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + AI ++ +AG ++ +Q V + Sbjct: 443 REFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521 >gi|301164314|emb|CBW23872.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 699 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61 + + +L N + E + + TP +L+N ND R +I Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI ERED + + I RYP+ +L + C Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + ++Y +E +Q+ +++ TGGD L+ Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+ P RIN ELI+ L Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + AI ++ +AG ++ +Q V + Sbjct: 443 REFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521 >gi|53714863|ref|YP_100855.1| hypothetical protein BF3578 [Bacteroides fragilis YCH46] gi|52217728|dbj|BAD50321.1| conserved hypothetical protein [Bacteroides fragilis YCH46] Length = 699 Score = 172 bits (437), Expect = 7e-41, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61 + + +L N + E + + TP +L+N ND R +I Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI ERED + + I RYP+ +L + C Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + ++Y +E +Q+ +++ TGGD L+ Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+ P RIN ELI+ L Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + AI ++ +AG ++ +Q V + Sbjct: 443 REFKEKASVIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521 >gi|265766723|ref|ZP_06094552.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263253100|gb|EEZ24576.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 699 Score = 172 bits (436), Expect = 8e-41, Method: Composition-based stats. Identities = 68/320 (21%), Positives = 118/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61 + + +L N + E + + TP +L+N ND R +I Sbjct: 203 AIKTPTELNRFLGNSLSSETMYLLSRARKKGMPFFATPYYLSLLNTSGEGYNDEAIRSYI 262 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI ERED + + I RYP+ +L + C Sbjct: 263 LYSPRLVETYGNIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 322 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + ++Y +E +Q+ +++ TGGD L+ Sbjct: 323 GLCASCQRMYDFQSERLNFEFDALRPKESWDKKLRRLMSYFEEDTQLRDILITGGDALMS 382 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L+ + + +Q +R SR+ P RIN ELI+ L Sbjct: 383 QNKTLKNILEAVYRMAARKRKANQERPEGEKYAELQRVRLGSRLLAYLPMRINDELIEIL 442 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + AI ++ +AG ++ +Q V + Sbjct: 443 REFKEKASAIGVKQFIIQTHFQSPLEVTPYTREAIRKILSAGWLITNQLVYTVAASRRGH 502 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 503 T-TRLRQVLNSLGVVCYYTF 521 >gi|301310737|ref|ZP_07216676.1| KamA family protein [Bacteroides sp. 20_3] gi|300832311|gb|EFK62942.1| KamA family protein [Bacteroides sp. 20_3] Length = 704 Score = 172 bits (436), Expect = 9e-41, Method: Composition-based stats. Identities = 66/356 (18%), Positives = 127/356 (35%), Gaps = 65/356 (18%) Query: 7 TLTSAQDLYNAN--LIKKEQIDEIKEISNH-YSIALTPVIANL--INPHNPNDPIARQFI 61 + S +L + E + + +TP +L I +D R +I Sbjct: 209 AIKSPTELNFFLGYSLSDETMSLLARAKKKGMPFFVTPYYLSLLNIEHEGYDDATVRSYI 268 Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 EL E+ED + + + I RYP+ +L + C Sbjct: 269 MYSNELVDTYGSIKAWEKEDMVVADEPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 328 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ + + + + Y +E +Q+ +++ TGGD L+ Sbjct: 329 GLCASCQRMYDFQSERLNFDFEVLKPKESWDRKLRRLMRYFEEDAQLRDILITGGDALMS 388 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 + L+K+L+ + + +Q +R SR+ P R+ EL+ L Sbjct: 389 QNATLRKILEAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRVTDELVGIL 448 Query: 201 KEAGK--------PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + YI H P E + EA AI + AG + +Q V + Sbjct: 449 REFKEKASAIGVSQFYIQTHFQSPLEVTPEARHAIEAILAAGWTITNQLVYTVSASRKGH 508 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRL------TIEEGQKIVASLKEKIS 302 A L +T L + YY + ++ + +++E ++ + ++ Sbjct: 509 T-AKLRQTLNALGVVCYYTFS--VKGFRENYAVYTPNSRSLQEARE--EKIFGQVP 559 >gi|154492755|ref|ZP_02032381.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC 43184] gi|154087060|gb|EDN86105.1| hypothetical protein PARMER_02394 [Parabacteroides merdae ATCC 43184] Length = 703 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 64/320 (20%), Positives = 113/320 (35%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI 61 S +L + +D + +TP +L+N + +D R +I Sbjct: 208 AFKSPTELNYFLGGSLSAGTMDLLARARKKGMPFFVTPYYLSLLNTNTSGYDDATIRSYI 267 Query: 62 PQKEELNIL-----PEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 EEL E+ED + + I RYP+ +L + C Sbjct: 268 LYSEELVDTYGRIKAWEKEDIVVSGQPNAAGWLLPEGHNIHRRYPEVAILIPDSMGRACG 327 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ ++ + + + Y +E +Q+ +++ TGGD L+ Sbjct: 328 GLCASCQRMYDFQSERLNFDFESLKPKETWDKKLRRLMRYFEEDAQLRDILITGGDALMS 387 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 + L+ +L + + +Q +R SR+ P RI EL+ L Sbjct: 388 QNATLRNILDAVYKMAVRKRKANESRPEGEKYAELQRVRLGSRLLAYLPLRITDELVGIL 447 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 + I H P E + EA AI + +AG I+ +Q V + Sbjct: 448 RSFKDKASRVGVTQFIIQTHFQSPLEVTPEAKKAIEAILSAGWIITNQLVYTVAASRRGH 507 Query: 253 ILANLMRTFVELRIKPYYLH 272 A L +T + + YY Sbjct: 508 T-AKLRQTLNAMGVVCYYTF 526 >gi|189467675|ref|ZP_03016460.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM 17393] gi|189435939|gb|EDV04924.1| hypothetical protein BACINT_04065 [Bacteroides intestinalis DSM 17393] Length = 697 Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 118/318 (37%), Gaps = 55/318 (17%) Query: 9 TSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI-- 61 S +L N + E + + +TP +L+NP ND R +I Sbjct: 202 KSPTELNRFLGNSLSAETMYLLSRARKKGMPFFVTPYYLHLLNPGSTGYNDESLRSYILY 261 Query: 62 -PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCPVY 108 PQ E I ERED + + I RYP+ +L + C Sbjct: 262 SPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACGGL 321 Query: 109 CRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLILSH 159 C C R S + ++ + E L Y +E +Q+ +++ TGGD L+ + Sbjct: 322 CASCQRMYDFQSKRLNFEFDSLRPKETWEKKLRRLMTYFEEDTQLRDILITGGDALMSQN 381 Query: 160 KRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCLKE 202 K L +L+ + + +Q +R SR+P P RIN EL++ L+ Sbjct: 382 KTLNTILEAIYRMAARKRKANQERPEGEKYAELQRIRLGSRLPAYLPMRINNELVEILRT 441 Query: 203 AG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 + I H P E + EA I +L +AG ++ +Q V + Sbjct: 442 FKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGIRKLLSAGWLITNQLVYNVAASRRGHT- 500 Query: 255 ANLMRTFVELRIKPYYLH 272 L + EL + YY Sbjct: 501 TRLRQVLNELGVVCYYTF 518 >gi|299148849|ref|ZP_07041911.1| KamA family protein [Bacteroides sp. 3_1_23] gi|298513610|gb|EFI37497.1| KamA family protein [Bacteroides sp. 3_1_23] Length = 713 Score = 169 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 208 AIKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+ Sbjct: 328 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 387 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K LQ +L + + +Q +R SR+ P RIN L+ L Sbjct: 388 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 447 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 448 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 508 T-TRLRQVLNSLGVVCYYTF 526 >gi|224538814|ref|ZP_03679353.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus DSM 14838] gi|224519571|gb|EEF88676.1| hypothetical protein BACCELL_03710 [Bacteroides cellulosilyticus DSM 14838] Length = 697 Score = 169 bits (430), Expect = 4e-40, Method: Composition-based stats. Identities = 73/318 (22%), Positives = 118/318 (37%), Gaps = 55/318 (17%) Query: 9 TSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINPH--NPNDPIARQFI-- 61 S +L N + E + + +TP +L+NP ND R +I Sbjct: 202 KSPTELNRFLGNSLSAETMYLLSRARKKGMPFFVTPYYLHLLNPGSTGYNDESLRSYILY 261 Query: 62 -PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCPVY 108 PQ E I ERED + + I RYP+ +L + C Sbjct: 262 SPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACGGL 321 Query: 109 CRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLILSH 159 C C R S + ++ + E L Y +E +Q+ +++ TGGD L+ + Sbjct: 322 CASCQRMYDFQSKRLNFEFDSLRPKEIWEKKLRRLMTYFEEDTQLRDILITGGDALMSQN 381 Query: 160 KRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCLKE 202 K L +L+ + + +Q +R SR+P P RIN EL++ L+ Sbjct: 382 KTLNTILEAVYRMAARKRKANQERPEGEKYAELQRIRLGSRLPAYLPMRINNELVEILRT 441 Query: 203 AG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEIL 254 + I H P E + EA I +L +AG ++ +Q V + Sbjct: 442 FKEKASVIGIRQFIIQTHFQTPLEVTPEAKEGIRKLLSAGWLITNQLVYNVAASRRGHT- 500 Query: 255 ANLMRTFVELRIKPYYLH 272 L + EL + YY Sbjct: 501 TRLRQVLNELGVVCYYTF 518 >gi|167763257|ref|ZP_02435384.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC 43183] gi|167698551|gb|EDS15130.1| hypothetical protein BACSTE_01630 [Bacteroides stercoris ATCC 43183] Length = 699 Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats. Identities = 73/320 (22%), Positives = 117/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61 + S +L N + E + + TP +L+N ND R +I Sbjct: 201 AVKSPTELNRFLGNSLSVETMYLLSRARKKGMPFFATPYYLSLLNCTGSGYNDDSLRSYI 260 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 PQ E I ERED + + I RYP+ +L + C Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320 Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157 C C R S + + + + L Y +E +Q+ +++ TGGD L+ Sbjct: 321 GLCASCQRMYDFQSKRLNFEFEELHPKESWDKKLRRLMTYFEEDTQLRDILITGGDALMS 380 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L+ +L + + +Q +R SR+P P RIN EL+ L Sbjct: 381 QNKTLRNILDAVYRMAVRKRKANQERPEGEKYAELQRIRLGSRLPAYLPMRINDELVDIL 440 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA I +L +AG ++ +Q V + Sbjct: 441 REFKEKASTVGIRQFIIQTHFQTPLEVTPEAEEGIRKLLSAGWLITNQLVYNVAASRRGH 500 Query: 253 ILANLMRTFVELRIKPYYLH 272 A L + +L I YY Sbjct: 501 T-ARLRQVLNKLGIICYYTF 519 >gi|160887264|ref|ZP_02068267.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483] gi|156107675|gb|EDO09420.1| hypothetical protein BACOVA_05282 [Bacteroides ovatus ATCC 8483] Length = 711 Score = 169 bits (428), Expect = 7e-40, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+ Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 385 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K LQ +L + + +Q +R SR+ P RIN L+ L Sbjct: 386 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 445 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524 >gi|260171420|ref|ZP_05757832.1| hypothetical protein BacD2_06100 [Bacteroides sp. D2] Length = 711 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+ Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 385 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K LQ +L + + +Q +R SR+ P RIN L+ L Sbjct: 386 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 445 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524 >gi|315919734|ref|ZP_07915974.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313693609|gb|EFS30444.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 713 Score = 169 bits (428), Expect = 8e-40, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 208 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+ Sbjct: 328 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 387 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K LQ +L + + +Q +R SR+ P RIN L+ L Sbjct: 388 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 447 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 448 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 508 T-TRLRQVLNSLGVVCYYTF 526 >gi|293369159|ref|ZP_06615753.1| KamA family protein [Bacteroides ovatus SD CMC 3f] gi|292635742|gb|EFF54240.1| KamA family protein [Bacteroides ovatus SD CMC 3f] Length = 711 Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 265 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+ Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 385 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K LQ +L + + +Q +R SR+ P RIN L+ L Sbjct: 386 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 445 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524 >gi|237721600|ref|ZP_04552081.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229449396|gb|EEO55187.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 713 Score = 168 bits (427), Expect = 9e-40, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 119/320 (37%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 208 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNVTGYGYNDEAIRSYI 267 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 268 LYSPRLVETYGNIRAWEKEDIVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 327 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ ++ + + +AY +E +Q+ +++ TGGD L+ Sbjct: 328 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMAYFEEDTQLRDILITGGDALMS 387 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K LQ +L + + +Q +R SR+ P RIN L+ L Sbjct: 388 QNKTLQNILDAVYRMAARKQRANLERKDGEKYAELQRVRLGSRLLAYLPMRINDGLVDVL 447 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 448 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 507 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 508 T-TRLRQVLNSLGVVCYYTF 526 >gi|270293625|ref|ZP_06199827.1| conserved hypothetical protein [Bacteroides sp. D20] gi|270275092|gb|EFA20952.1| conserved hypothetical protein [Bacteroides sp. D20] Length = 698 Score = 168 bits (427), Expect = 1e-39, Method: Composition-based stats. Identities = 70/320 (21%), Positives = 116/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61 + S +L N + E + + + TP +L+N +D R +I Sbjct: 201 AVKSPTELNRLLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTGSGYDDEALRSYI 260 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 PQ E I ERED + + I RYP+ +L + C Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320 Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S + T+ + E + Y +E +Q+ +++ TGGD L+ Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRRLMDYFEEDTQLRDILITGGDALMS 380 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L +L + + +Q +R SR+P P RIN L++ L Sbjct: 381 QNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQRVRLGSRLPAYLPMRINDGLVEIL 440 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA I +L AG ++ +Q V + Sbjct: 441 REFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + +L + YY Sbjct: 501 T-TRLRQVLNQLGVVCYYTF 519 >gi|160888851|ref|ZP_02069854.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492] gi|156861750|gb|EDO55181.1| hypothetical protein BACUNI_01271 [Bacteroides uniformis ATCC 8492] Length = 698 Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 116/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61 + S +L N + E + + + TP +L+N +D R +I Sbjct: 201 AVKSPTELNRLLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTGSGYDDEALRSYI 260 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 PQ E I ERED + + I RYP+ +L + C Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320 Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S + T+ + E +AY +E +Q+ +++ TGGD L+ Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRRLMAYFEEDTQLRDILITGGDALMS 380 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L +L + + +Q +R SR+P P RIN L++ L Sbjct: 381 QNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQRVRLGSRLPAYLPMRINDGLVEIL 440 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E I H P E + EA I +L AG ++ +Q V + Sbjct: 441 REFKEKASTIGIHQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + +L + YY Sbjct: 501 T-TRLRQVLNQLGVVCYYTF 519 >gi|317479408|ref|ZP_07938542.1| KamA family protein [Bacteroides sp. 4_1_36] gi|316904482|gb|EFV26302.1| KamA family protein [Bacteroides sp. 4_1_36] Length = 698 Score = 167 bits (425), Expect = 2e-39, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 117/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLINP--HNPNDPIARQFI 61 + S +L N + E + + + TP +L+N +D R +I Sbjct: 201 AVKSPTELNRLLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLNCTGSGYDDEALRSYI 260 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 PQ E I ERED + + I RYP+ +L + C Sbjct: 261 LYSPQLVETYGQIRAWEREDIVEPGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 320 Query: 107 VYCRFCFRREMVGS-----QKGTVLSSKDTEA----ALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S + T+ + E +AY +E +Q+ +++ TGGD L+ Sbjct: 321 GLCASCQRMYDFQSKRLNFEFDTLRPKETWEKKLRRLMAYFEEDTQLRDILITGGDALMS 380 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L +L + + +Q +R SR+P P RIN L++ L Sbjct: 381 QNKTLGNILDAVYRMAVRKRKANQERPEGEKYAELQRVRLGSRLPAYLPMRINDGLVEIL 440 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA I +L AG ++ +Q V + Sbjct: 441 REFKEKASTIGIRQFIIQTHFQTPLEVTPEAAEGIRKLLAAGWLIDNQLVYNVAASRRGH 500 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + +L + YY Sbjct: 501 T-TRLRQVLNQLGVVCYYTF 519 >gi|295087042|emb|CBK68565.1| L-lysine 2,3-aminomutase [Bacteroides xylanisolvens XB1A] Length = 713 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 118/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNITGYGYNDEAIRSYI 265 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157 C C R S++ ++ + + L Y +E +Q+ +++ TGGD L+ Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K LQ +L + + +Q +R SR+ P RIN L+ L Sbjct: 386 QNKTLQHILDAVYRMAVRKQKANLERPEGEKYAELQRVRLGSRLLAYLPMRINDGLVDIL 445 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524 >gi|328884100|emb|CCA57339.1| Lysine 2,3-aminomutase [Streptomyces venezuelae ATCC 10712] Length = 431 Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats. Identities = 70/349 (20%), Positives = 121/349 (34%), Gaps = 54/349 (15%) Query: 26 DEIKEISNHYSIALTPVIAN-LINPH-NPNDPIARQFIPQKEELNILPE----------- 72 E + + +T +A+ L++ P+DP+ R +P + L Sbjct: 24 HEAEVVGQVLPFRVTSHVADELVDWTRAPDDPLYRLVMPHRGLLAPADFAAVERSLRDGD 83 Query: 73 ------------EREDPIGDNNHSPLKGIVHRYPDRILLKLLH--VCPVYCRFCFRREMV 118 ER DP G+ HRYP+ +L+ C C C R Sbjct: 84 RDRLRLVVDGLRERLDPHPAGRD--AAGLRHRYPETLLVLPGQGRTCHGPCASCSRWPRF 141 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI---------------LSHKRLQ 163 EA + +I +V+F G P L RL Sbjct: 142 AGDPVRGRELGGPEALGDRLDRHPEITDVLFAGV-PFAGGSGADPPDPPDPFELRTARLA 200 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPE--------LIQCLKEAGKPVYIAIHANH 215 + L V+ +R +R P R L++ + +G+ + + ++ H Sbjct: 201 PYVTALLDRPGVRTVRIVTRAVSRFPGRFLDAPDADDLLRLLERVVASGRHLVLTLYVCH 260 Query: 216 PYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP 274 P E A A+ RLA G +L ++ +L+ +NDD + A + R L + PY + Sbjct: 261 PRELRPATARRALGRLAATGAVLRTRGAVLRRVNDDAALWARMWREQTALGLAPYGMLVE 320 Query: 275 DLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKID 323 FRL + ++ A ++ GL +P G + +D Sbjct: 321 RGGGVRRCFRLPLARVLEVHAEALRRVPGLAGRVCGPVMPTELGVLAVD 369 >gi|237715748|ref|ZP_04546229.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262408756|ref|ZP_06085302.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|294644787|ref|ZP_06722531.1| KamA family protein [Bacteroides ovatus SD CC 2a] gi|294806062|ref|ZP_06764919.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b] gi|229444457|gb|EEO50248.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262353621|gb|EEZ02715.1| conserved hypothetical protein [Bacteroides sp. 2_1_22] gi|292639865|gb|EFF58139.1| KamA family protein [Bacteroides ovatus SD CC 2a] gi|294446730|gb|EFG15340.1| KamA family protein [Bacteroides xylanisolvens SD CC 1b] Length = 712 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 118/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNITGYGYNDEAIRSYI 265 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157 C C R S++ ++ + + L Y +E +Q+ +++ TGGD L+ Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K LQ +L + + +Q +R SR+ P RIN L+ L Sbjct: 386 QNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQRVRLGSRLLAYLPMRINDGLVDIL 445 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524 >gi|298484432|ref|ZP_07002588.1| KamA family protein [Bacteroides sp. D22] gi|298269405|gb|EFI11010.1| KamA family protein [Bacteroides sp. D22] Length = 713 Score = 166 bits (422), Expect = 3e-39, Method: Composition-based stats. Identities = 71/320 (22%), Positives = 118/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + TP +L+N + ND R +I Sbjct: 206 AVKSPGELNRFLGNSLSSETMYLLYRARKKGMPFFATPYYLSLLNITGYGYNDEAIRSYI 265 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 P+ E NI E+ED + + I RYP+ +L + C Sbjct: 266 LYSPRLVETYGNIRAWEKEDIVEVGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 325 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTEAALA----YIQEKSQIWEVIFTGGDPLIL 157 C C R S++ ++ + + L Y +E +Q+ +++ TGGD L+ Sbjct: 326 GLCASCQRMYDFQSERLNFEFESLRPKESWDRKLRRLMTYFEEDTQLRDILITGGDALMS 385 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K LQ +L + + +Q +R SR+ P RIN L+ L Sbjct: 386 QNKTLQNILDAVYRMAVRKQKANLERPEGEKYAELQRVRLGSRLLAYLPMRINDGLVDIL 445 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E K I H P E + EA AI ++ +AG I+ +Q V + Sbjct: 446 REFKEKASAIGVKQFIIQTHFQTPLEVTPEAKEAIRKILSAGWIITNQLVYTVAASRRGH 505 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 506 T-TRLRQVLNSLGVVCYYTF 524 >gi|313158793|gb|EFR58178.1| KamA family protein [Alistipes sp. HGB5] Length = 698 Score = 165 bits (419), Expect = 8e-39, Method: Composition-based stats. Identities = 66/320 (20%), Positives = 118/320 (36%), Gaps = 55/320 (17%) Query: 7 TLTSAQDLYNA--NLIKKEQIDEIKEISNH-YSIALTPVIANLIN--PHNPNDPIARQFI 61 + S +L N + E + + + TP +L++ D R +I Sbjct: 202 AVKSPSELNRFLGNSLSAETMYLLSKARKKGMPFFATPYYLSLLDVTGKGYGDEAIRSYI 261 Query: 62 ---PQKEEL--NILPEEREDPIGDNNHSPL-------KGIVHRYPDRILLK---LLHVCP 106 PQ E +I E+ED + + I RYP+ +L + C Sbjct: 262 LYSPQLVETYGSIRAWEKEDVVEAGKPNAAGWLLPDGHNIHRRYPEVAILIPDTMGRACG 321 Query: 107 VYCRFCFRREMVGSQK-----GTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDPLIL 157 C C R S++ ++ + + + Y +E +Q+ +++ TGGD L+ Sbjct: 322 GLCASCQRMYDFQSERLNFEFESLRPKESWDHKLRRLMTYFEEDTQLRDILITGGDALMS 381 Query: 158 SHKRLQKVLKTLRYIK-----------------HVQILRFHSRVPIVDPQRINPELIQCL 200 +K L +L+ + + +Q +R SR+P P RI+ L++ L Sbjct: 382 QNKTLHNILEAVYRMACRKRKANAGRPDGEKYAELQRVRLGSRLPAYLPMRIDDGLVEVL 441 Query: 201 KEAG--------KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +E + I H P E + EA AI R+ AG ++ +Q V + Sbjct: 442 REFKQKASAVGVRQFIIQTHFQSPLEVTPEAQEAIRRILAAGWLVTNQLVYTVAASRRGH 501 Query: 253 ILANLMRTFVELRIKPYYLH 272 L + L + YY Sbjct: 502 T-TRLRQVLNALGVVCYYTF 520 >gi|289665699|ref|ZP_06487280.1| Putative radical SAM superfamily protein [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 123 Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats. Identities = 43/123 (34%), Positives = 65/123 (52%) Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 +++ PV +HANH EF AA+ L +AG LL+Q+VLL+G+ND + LA L Sbjct: 1 MRQLPWPVAFVLHANHANEFDSSVDAAMHALRDAGAHLLNQAVLLRGVNDSVDALAALSE 60 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + PYYLH D AG +HF + + + L ++SG P + ++PG GK Sbjct: 61 RSFAAGVLPYYLHQLDRVAGVAHFEVDDALARAMHTELATRLSGYLVPRLVREIPGDTGK 120 Query: 320 VKI 322 + Sbjct: 121 RPL 123 >gi|213024108|ref|ZP_03338555.1| hypothetical protein Salmonelentericaenterica_16976 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 105 Score = 152 bits (386), Expect = 5e-35, Method: Composition-based stats. Identities = 44/104 (42%), Positives = 62/104 (59%) Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 GDPL+ L +L L IKHV+ LR HSR+PIV P RI EL+ ++ + + Sbjct: 1 GDPLMAKDHELDWLLTQLEAIKHVKRLRIHSRLPIVIPARITDELVARFDQSCLQILLVN 60 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 H NH E E A+ +L + G+ LL+QSVLL+G+ND+ + LA Sbjct: 61 HINHANEVDEAFCLAMKKLRHVGVTLLNQSVLLRGVNDNAQTLA 104 >gi|75764491|ref|ZP_00743973.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|74488018|gb|EAO51752.1| LYSINE 2,3-AMINOMUTASE [Bacillus thuringiensis serovar israelensis ATCC 35646] Length = 202 Score = 152 bits (385), Expect = 8e-35, Method: Composition-based stats. Identities = 29/100 (29%), Positives = 53/100 (53%) Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILD 312 I+ LM V++R++PYY++ DL+ G HFR + +G +I+ L+ SG P +++D Sbjct: 9 IMKKLMHDLVKIRVRPYYIYQCDLSEGIGHFRAPVSKGLEIIEGLRGHTSGYAVPTFVVD 68 Query: 313 LPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYPPKSS 352 PGG GK+ + + + + + ++ YP S Sbjct: 69 APGGGGKIALQPNYLISQSADKVVLRNFEGVITTYPEPES 108 >gi|332975102|gb|EGK12007.1| lysine 2,3-aminomutase [Desmospora sp. 8437] Length = 189 Score = 150 bits (379), Expect = 3e-34, Method: Composition-based stats. Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 7/145 (4%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPE 72 D+ I +E+ +++ +I+N + L +LI+ ++PNDPI + IP + EL+ Sbjct: 19 DIRKIQEIPEEKREKLTKITNKFVFRLNDYYLSLIDWNDPNDPIYKLIIPSEAELDE--Y 76 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 + D + + + G H+Y LL + VC YCRFCFR+ + + +S D Sbjct: 77 GKWDASDEYTNYVVPGCQHKYQTTALLIVSEVCGAYCRFCFRKRLF--RNDVHEASLDVA 134 Query: 133 AALAYIQEKSQIWEVIFTGG---DP 154 + YI++ QI V+ TGG DP Sbjct: 135 PGVEYIRKNPQINNVLLTGGRLPDP 159 >gi|332975101|gb|EGK12006.1| protein of hypothetical function DUF160 [Desmospora sp. 8437] Length = 187 Score = 149 bits (377), Expect = 5e-34, Method: Composition-based stats. Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 8/139 (5%) Query: 190 QRI--NPELIQCLKEAGK---PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 RI + EL+ L E +++ H NHP E +++A AI L AG+IL++Q+ +L Sbjct: 1 MRIYEDKELLDTLSEYSLGDSRIHVMAHFNHPRELTDQAYRAIDALQRAGVILVNQTPVL 60 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 KGINDDPEILA L+ + PYY AG + F LT E +++ K + SGL Sbjct: 61 KGINDDPEILAELLDKLSWAGVTPYYFFQNRPVAGNADFVLTFREAYEVIEQAKARTSGL 120 Query: 305 CQP-FYILDLPGGYGKVKI 322 + Y + GK++I Sbjct: 121 GKRIRYA--MSHSTGKIEI 137 >gi|167944999|ref|ZP_02532073.1| KamA family protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 107 Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats. Identities = 36/106 (33%), Positives = 52/106 (49%) Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 E S + +L+ GI LL+QSVLL+G+ND E LA L + + PYYLH D Sbjct: 1 REISAAVADGLQQLSEQGIRLLNQSVLLRGVNDSAETLAELSEQLFDAGVMPYYLHLLDR 60 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 G +HF L + Q+I +L + G P + + G K + Sbjct: 61 VDGAAHFELPAAKSQQIYQALLAALPGYLVPKLVREEVGAPSKTPV 106 >gi|226327320|ref|ZP_03802838.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198] gi|225204538|gb|EEG86892.1| hypothetical protein PROPEN_01187 [Proteus penneri ATCC 35198] Length = 153 Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats. Identities = 29/136 (21%), Positives = 64/136 (47%), Gaps = 4/136 (2%) Query: 6 KTLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQK 64 + ++ +L ++ E++ + + + + + + +PNDP+ Q + Sbjct: 21 QAISDPVELLQLLALEHHEELQKGAQARRLFPLRVPREFVARMKKGDPNDPLLLQVLTAN 80 Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E I P DP+ + ++ + G++H+Y +R LL + C V CR+CFRR + Sbjct: 81 AEFTITPGFSTDPLDEQQNA-VPGLLHKYQNRALLLVKGGCAVNCRYCFRRHFPY--EDN 137 Query: 125 VLSSKDTEAALAYIQE 140 + + + A+ YI++ Sbjct: 138 KGNKANWQKAIEYIKK 153 >gi|270669603|ref|ZP_06222610.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212] gi|270316555|gb|EFA28395.1| lysine 2;3-aminomutase [Haemophilus influenzae HK1212] Length = 105 Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats. Identities = 34/101 (33%), Positives = 50/101 (49%) Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAG 279 + A+ +L + LL+QSVLL+ +NDD +IL L + I PYYLH D G Sbjct: 1 DQIFTNAMQKLNAVNVTLLNQSVLLRSVNDDAQILKILSDKLFQTGILPYYLHLLDKVQG 60 Query: 280 TSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 SHF ++ E +I +L+ SG P ++ G K Sbjct: 61 ASHFLISDIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 101 >gi|10198121|gb|AAG15195.1|AF286047_3 unknown [Chlorobaculum tepidum] Length = 276 Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats. Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 37/176 (21%) Query: 33 NHYSIALTPVIA-NLINPHN-PNDPIARQFIPQKEELNILPEER--------EDP--IGD 80 Y + +A NLI+ N P+DP+ R PQ L+ DP I + Sbjct: 46 EVYPFRVNSHVAENLIDWSNIPDDPMFRLTFPQAGMLSADDYTMLSGLVASNADPSIIRE 105 Query: 81 N-----------------------NHSPLKGIVHRYPDRILLKLL--HVCPVYCRFCFRR 115 + P G+ H+Y + +L L VC YC +CFR Sbjct: 106 EARKIQLRQNPNPAGQMELNTPWLDDEPFHGMQHKYRESVLFFPLEAQVCHAYCTYCFRW 165 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 + ++ E + Y+++ ++ +VIFTGGDP+++S ++K+ T + Sbjct: 166 PQFSGVENLKFANDSIERLVEYLEQHPEVKDVIFTGGDPMVMSTMLIKKIHATAAW 221 >gi|58426923|gb|AAW75960.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae KACC10331] Length = 237 Score = 112 bits (282), Expect = 7e-23, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 52/134 (38%), Gaps = 3/134 (2%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + + L + + + + + + + + +DP+ RQ Sbjct: 22 WQQQWRDAVRDPRVLLELLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQ 81 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG 119 +P E+ +P D +GD G++ +Y R LL C V+CR+CFRR Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAAKTAAGVIQKYRGRALLIATGSCAVHCRYCFRRHFPY 141 Query: 120 SQKGTVLSSKDTEA 133 +++ + Sbjct: 142 AEE--TAARDGWRE 153 >gi|213859667|ref|ZP_03385371.1| hypothetical protein SentesT_25317 [Salmonella enterica subsp. enterica serovar Typhi str. M223] Length = 81 Score = 106 bits (266), Expect = 5e-21, Method: Composition-based stats. Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 ++E I P DP+ + HS + G++H+Y +R LL + C V CR+CFRR ++ Sbjct: 1 SQDEFVIAPGFSTDPL-EEQHSVVSGLLHKYHNRALLLVKGGCAVNCRYCFRRHFPYAEN 59 Query: 123 GTVLSSKDTEAALAYIQEKSQIWE 146 + ++ + AL Y+ ++ E Sbjct: 60 QG--NKRNWQTALEYVAAHPELDE 81 >gi|325918736|ref|ZP_08180828.1| hypothetical protein XVE_4859 [Xanthomonas vesicatoria ATCC 35937] gi|325535030|gb|EGD06934.1| hypothetical protein XVE_4859 [Xanthomonas vesicatoria ATCC 35937] Length = 130 Score = 88.2 bits (218), Expect = 2e-15, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 42/109 (38%), Gaps = 1/109 (0%) Query: 1 MQLRHK-TLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQ 59 Q + + + + L + + E + + + + + + +DP+ RQ Sbjct: 22 WQQQWRDAVRDPRVLLELLGLDAQAAGISAEAAAQFPLRVPQAFVARMRHGDLHDPLLRQ 81 Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108 +P E+ +P D +GD G++ +Y R LL C V+ Sbjct: 82 VLPLDAEMQPVPGFGLDAVGDAAARTAAGVIQKYRGRALLIATGSCAVH 130 >gi|227357433|ref|ZP_03841787.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906] gi|227162391|gb|EEI47391.1| conserved hypothetical protein [Proteus mirabilis ATCC 29906] Length = 63 Score = 87.1 bits (215), Expect = 4e-15, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 28/58 (48%) Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 PYYLH D G +HF + E ++I+ SL +SG P ++ G K +D Sbjct: 1 MPYYLHVLDKVQGAAHFMVPDSEAREIMKSLMSLVSGYMVPKLTREIGGEPSKTLLDL 58 >gi|154308719|ref|XP_001553695.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10] gi|150852733|gb|EDN27925.1| hypothetical protein BC1G_07782 [Botryotinia fuckeliana B05.10] Length = 309 Score = 85.2 bits (210), Expect = 2e-14, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 5/88 (5%) Query: 18 NLIKKEQ-IDEIKEISNHYSIAL--TPVIANLINPHNP-NDPIARQFIPQKE-ELNILPE 72 ++ +E I+++KE +++ P + ++I+ NP DPI RQFIP K +L P+ Sbjct: 211 GIVTREDFIEDVKEGIKLAPMSIRLPPHVLSIIDWENPFEDPIRRQFIPMKSSKLEDHPK 270 Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLK 100 D + +++ SP++G VHRY D+ L Sbjct: 271 VELDSLHESDDSPVEGFVHRYYDKALFL 298 >gi|163784746|ref|ZP_02179552.1| Lysine 2,3-aminomutase [Hydrogenivirga sp. 128-5-R1-1] gi|159879987|gb|EDP73685.1| Lysine 2,3-aminomutase [Hydrogenivirga sp. 128-5-R1-1] Length = 115 Score = 80.5 bits (198), Expect = 3e-13, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 41/88 (46%), Gaps = 3/88 (3%) Query: 1 MQLRHKTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQF 60 Q+ ++ LT+ +++ + KE + + + TP +LI + ++PI +Q Sbjct: 28 WQIANR-LTTLEEIKKIFPVSKELETAFLKTTEIFHFGTTPYYLSLIKEFSYDNPIFKQV 86 Query: 61 IPQKEELN--ILPEEREDPIGDNNHSPL 86 P +E++ EDP ++ SP+ Sbjct: 87 FPSLDEIDKEKQKYSYEDPFLEDTLSPV 114 >gi|213418029|ref|ZP_03351106.1| KamA family protein [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] Length = 67 Score = 80.2 bits (197), Expect = 5e-13, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLL 102 + NP+DP+ RQ + ++E + P DP+ + HS + G++H+Y +R LL + Sbjct: 9 FIARMEKGNPDDPLLRQVLTSRDEFIVAPGFSTDPL-EEQHSVVPGLLHKYQNRALLLVK 67 >gi|255281034|ref|ZP_05345589.1| PDZ domain protein [Bryantella formatexigens DSM 14469] gi|255268482|gb|EET61687.1| PDZ domain protein [Bryantella formatexigens DSM 14469] Length = 456 Score = 76.3 bits (187), Expect = 6e-12, Method: Composition-based stats. Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 41/184 (22%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 H C C FCF +M + T+ Y ++ + F G+ + L++ Sbjct: 88 YHSCRNRCIFCFIDQMPPGMRKTL-----------YFKDDD--TRLSFLQGNYVTLTN-- 132 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFS 220 + + QILR+H + Q +NP+L + L F+ Sbjct: 133 -------IGEMDMEQILRYHLSPINISFQTMNPQLRCKMLG---------------NRFA 170 Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGT 280 EA+ + RLA AGI + Q VL KG+ND E+ ++ + R PY + G Sbjct: 171 GEALKKVDRLAEAGIEMNGQIVLCKGVNDGEELEYSIRQL---TRYLPYLRSVSVVPVGL 227 Query: 281 SHFR 284 + FR Sbjct: 228 TRFR 231 >gi|262189696|ref|ZP_06048065.1| lysine 2,3-aminomutase [Vibrio cholerae CT 5369-93] gi|262034425|gb|EEY52796.1| lysine 2,3-aminomutase [Vibrio cholerae CT 5369-93] Length = 51 Score = 69.0 bits (168), Expect = 1e-09, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 27/48 (56%) Query: 278 AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTH 325 G +HF ++ ++ ++I+A L E++SG P ++ G K +D H Sbjct: 2 QGAAHFYVSDDKARQIMAGLIEQVSGYLVPKLTREIGGRPSKTPLDLH 49 >gi|167947613|ref|ZP_02534687.1| hypothetical protein Epers_14147 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 119 Score = 68.2 bits (166), Expect = 2e-09, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 2/105 (1%) Query: 7 TLTSAQDLYNANLIKK-EQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKE 65 T Q L+ + + + + + + A L+ +P DP+ RQ +P + Sbjct: 4 AFTHPQALFEFLQLDPGPAAWRALQAATTFPLRVPLGYAALMRKGDPADPLLRQVLPLAQ 63 Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDR-ILLKLLHVCPVYC 109 EL +P+GD+ P + + +CP C Sbjct: 64 ELQDQAGFDTNPVGDSAGRGTARSAAEVPGTSAIDRHWRLCPFNC 108 >gi|169626132|ref|XP_001806468.1| hypothetical protein SNOG_16345 [Phaeosphaeria nodorum SN15] gi|111055211|gb|EAT76331.1| hypothetical protein SNOG_16345 [Phaeosphaeria nodorum SN15] Length = 243 Score = 67.8 bits (165), Expect = 2e-09, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 3/96 (3%) Query: 225 AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHP-DLAAGTSHF 283 AAI L G+ + + + LL G+ + + L+ + I PY H A Sbjct: 75 AAIDHLFQHGVTVPNLTRLLSGVEEQASDMRELINKLSGIHIVPY--HVCLHEACEGEDL 132 Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGK 319 + + ++ ++ I P + DLP G GK Sbjct: 133 CVPLSVALQLEKEIRGPILDYQMPKLVADLPNGGGK 168 >gi|88800258|ref|ZP_01115825.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297] gi|88776973|gb|EAR08181.1| Molybdenum cofactor biosynthesis enzyme [Reinekea sp. MED297] Length = 322 Score = 67.4 bits (164), Expect = 3e-09, Method: Composition-based stats. Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 21/178 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + VC C +C G LS+ + EAA+ + ++ TGG+P + S Sbjct: 15 LSVTDVCNFRCSYCLPDGYQGKPDEAFLSASELEAAVRGFAQMGT-QKIRLTGGEPGLRS 73 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIV----DPQRINPELIQCLKEAGKPV-YIAIHA 213 L +++ L I + + PQRI L + + Sbjct: 74 D--LPEIIYRLNRIDGINNI-----AVTTNGYKLPQRIQHWADAGLNHLNVSIDSLDSST 126 Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD-PEILANLMRTFVELR 265 H E + E + +++ G+ + +VL+KG+NDD +L L +T V LR Sbjct: 127 FH--EITGHDRLAEVLEGLAKARELGLTVKVNAVLMKGVNDDLAAVLTWLKQTPVTLR 182 >gi|283797873|ref|ZP_06347026.1| PDZ domain protein [Clostridium sp. M62/1] gi|291074564|gb|EFE11928.1| PDZ domain protein [Clostridium sp. M62/1] Length = 465 Score = 67.1 bits (163), Expect = 4e-09, Method: Composition-based stats. Identities = 49/206 (23%), Positives = 76/206 (36%), Gaps = 50/206 (24%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q + T + Sbjct: 82 LMSEYRSCHNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 131 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 K + +I+RFH + Q +NP+L + L Sbjct: 132 KDKDFE------------RIIRFHLAPINISVQTMNPKLRCRMLN--------------- 164 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 F+ EA+ I RL AGI + Q VL KG+ND E+ ++ R PY + Sbjct: 165 NRFAGEALKKIDRLYEAGIPMNGQIVLCKGVNDGRELDFSIREL---TRYIPYMQSVSVV 221 Query: 277 AAGTSHFR---------LTIEEGQKI 293 G S +R E GQ I Sbjct: 222 PVGLSRYREGLYPLEPFTPEECGQAI 247 >gi|229004622|ref|ZP_04162360.1| Lysine 2,3-aminomutase protein [Bacillus mycoides Rock1-4] gi|228756663|gb|EEM05970.1| Lysine 2,3-aminomutase protein [Bacillus mycoides Rock1-4] Length = 177 Score = 65.5 bits (159), Expect = 1e-08, Method: Composition-based stats. Identities = 31/138 (22%), Positives = 51/138 (36%), Gaps = 38/138 (27%) Query: 6 KTLTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIA-NLINPHN-PNDPIARQFIPQ 63 T ++ +++ N I + EI+ I + + NLI+ N PNDP+ + P Sbjct: 14 YTTSNFKNIPQLNEISPHLMKEIEVIGSVLPFKVNSYYLNNLIDWGNVPNDPMFQLVFPN 73 Query: 64 KEE-------------------------------LNILPEERED---PIGDNNHSPLKGI 89 ++ LN P + + PI + N LKGI Sbjct: 74 RKMIEEEDYIKLESSIDTGDKALKKELVENIIKKLNPHPGGQMELNVPIVEENA--LKGI 131 Query: 90 VHRYPDRILLKLLHVCPV 107 H+Y + +L V PV Sbjct: 132 QHKYNETVLFFQKKVKPV 149 >gi|15607116|ref|NP_214498.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5] gi|7674126|sp|O67929|MOAA_AQUAE RecName: Full=Molybdenum cofactor biosynthesis protein A gi|2984358|gb|AAC07877.1| molybdenum cofactor biosynthesis protein A [Aquifex aeolicus VF5] Length = 320 Score = 64.0 bits (155), Expect = 3e-08, Method: Composition-based stats. Identities = 43/189 (22%), Positives = 85/189 (44%), Gaps = 30/189 (15%) Query: 94 PDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQ--EKSQIWEV 147 P ++L + L C + C FC M ++ L + E Y++ K + +V Sbjct: 9 PLKVLRISLTDRCNLRCNFC----MPPGKEYNFLPKRQLLTPEEIEEYVKIFAKLGVEKV 64 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KP 206 TGG+PL+ L+++++ + ++ ++ + + + +R ++ LKEAG K Sbjct: 65 RLTGGEPLLRED--LEEIIQRISKVEGIKDIALTTNG-VFLKER-----LKALKEAGLKR 116 Query: 207 VYIAIHANHP--------YEFS-EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 + +++H+ +P + E I R G + SV++KG NDD + +L Sbjct: 117 ITVSVHSLNPEKNQKLVNRSVNLGEVFEVIIRAKELGFKVKVNSVIIKGFNDD--EILDL 174 Query: 258 MRTFVELRI 266 R F L + Sbjct: 175 ARFFKNLGV 183 >gi|157694065|ref|YP_001488527.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus SAFR-032] gi|157682823|gb|ABV63967.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus SAFR-032] Length = 335 Score = 63.6 bits (154), Expect = 5e-08, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 75/192 (39%), Gaps = 37/192 (19%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKD 130 D I D H PL+ + + + C C +C E+ G K +LS ++ Sbjct: 2 DSILDKRHRPLRDLR--------ISVTDRCNFRCTYCMPAEIFGPDYPFLNKEELLSFEE 53 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIV 187 E + + ++ TGG+PL+ L +++ L I ++ + + +P+ Sbjct: 54 IEQLATLFAKDLGVVKIRITGGEPLLRKD--LPILIEKLSNIPGIEDIAMTTNGTLLPVY 111 Query: 188 DPQRINPELIQCLKEAGKP-VYIAIHANHPYEFS---------EEAIAAISRLANAGIIL 237 LK+AG V I++ + +P F ++ I AG+ + Sbjct: 112 ---------ADKLKKAGLQRVTISLDSLNPDRFKQMNGRNISIQKVFDGIEAAKKAGLAI 162 Query: 238 LSQSVLLKGIND 249 V+ KG+ND Sbjct: 163 KINMVVQKGVND 174 >gi|295110182|emb|CBL24135.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus obeum A2-162] Length = 460 Score = 61.3 bits (148), Expect = 2e-07, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 38/163 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C +C FCF +M + T+ Y ++ + F G+ + L Sbjct: 83 LMDDYRSCSNHCMFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYVTL 129 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 ++ + + +++++H V Q +NP+L + L H Sbjct: 130 TNMSQEDI---------ERVIKYHLSPINVSFQAMNPKLRCKML-----------H---- 165 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 F+ +A+ + RL AGI + Q VL KG+ND E+ +L Sbjct: 166 NRFAGDALKKVDRLYEAGITMNGQIVLCKGVNDGEELEYSLRE 208 >gi|332702939|ref|ZP_08423027.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio africanus str. Walvis Bay] gi|332553088|gb|EGJ50132.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio africanus str. Walvis Bay] Length = 345 Score = 60.5 bits (146), Expect = 4e-07, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 64/166 (38%), Gaps = 28/166 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C +CF +++ ++L ++ + + ++ I +V TGG+P + Sbjct: 26 LSVTDRCNLRCAYCFSKDIRFIDHQSILRYEELLTIVD-LAKELGIRKVRLTGGEPFVRK 84 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN---- 214 +++ + LR + + ++ LKE G H N Sbjct: 85 D--FLWLVEHILARHPELDLRITTNA------TLLAGKVRTLKELG-----VTHLNVSLD 131 Query: 215 ----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 +F + +A+ + GI L +V ++G+NDD Sbjct: 132 TLDPRKFVDITGRDFFRQVRSALDEVMAEGIKLKVNAVAMRGVNDD 177 >gi|66576257|gb|AAY51688.1| MiaB-like tRNA modifying enzyme [Chlorobium tepidum TLS] Length = 446 Score = 60.1 bits (145), Expect = 4e-07, Method: Composition-based stats. Identities = 48/229 (20%), Positives = 81/229 (35%), Gaps = 50/229 (21%) Query: 17 ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHN----PND--PIARQFIPQKEELNIL 70 + ++I +IK +S + + T I ++ PND P+ + P + + Sbjct: 81 YAQLDPKRIADIKGVS--FVLGTTDKFE--IAWYDGESLPNDSEPLVK-VSPVDKAITAH 135 Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF------RREMVGSQKGT 124 P + R LK+ C C +C R V Sbjct: 136 PACSMLSQPEKG-----------RTRAFLKIQDGCSFGCAYCSIPLARGRSRSVSLSTVL 184 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 + K +A E++ TG GD RL +L+ L I V +R Sbjct: 185 DRAQKIADAGY---------REIVLTGINIGD-YQDGDTRLSGLLRRLETID-VSRIRIS 233 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISR 229 S V+PQ ++ ELI + +GK I H + P + + + A+ R Sbjct: 234 S----VEPQLLDDELIDIVAASGK---IMPHFHLPLQSGSDTVLRAMRR 275 >gi|153812951|ref|ZP_01965619.1| hypothetical protein RUMOBE_03358 [Ruminococcus obeum ATCC 29174] gi|149830898|gb|EDM85988.1| hypothetical protein RUMOBE_03358 [Ruminococcus obeum ATCC 29174] Length = 468 Score = 59.7 bits (144), Expect = 6e-07, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 67/163 (41%), Gaps = 38/163 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C +C FCF +M + T+ Y ++ + F G+ + L Sbjct: 91 LMDDYRSCSNHCMFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYVTL 137 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 ++ + + +++++H V Q +NP+L + L H Sbjct: 138 TNMSQEDI---------ERVIKYHLSPINVSFQAMNPQLRCKML-----------H---- 173 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 F+ +A+ + +L AGI + Q VL KG+ND E+ +L + Sbjct: 174 NRFAGDALKKVDQLYEAGITMNGQIVLCKGVNDGEELEYSLQK 216 >gi|225570487|ref|ZP_03779512.1| hypothetical protein CLOHYLEM_06588 [Clostridium hylemonae DSM 15053] gi|225160684|gb|EEG73303.1| hypothetical protein CLOHYLEM_06588 [Clostridium hylemonae DSM 15053] Length = 435 Score = 59.7 bits (144), Expect = 7e-07, Method: Composition-based stats. Identities = 42/188 (22%), Positives = 71/188 (37%), Gaps = 41/188 (21%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M G + T+ D ++ L+++Q + T + Sbjct: 82 LMDEYRSCRNKCMFCFIDQMPGGMRDTLYFKDD-DSRLSFLQGN----YITLT-----NM 131 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 S ++ +I+ +H + NPEL + L H Sbjct: 132 SDHDIE------------RIVTYHLEPINISFHTTNPELRCKML-----------H---- 164 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 F+ +A+ + RL GI + Q VL KGIND E+ ++ R PY + Sbjct: 165 NRFAGDALRKVDRLYEGGITMNGQIVLCKGINDGEELERSIRD---MSRYLPYLQSVSVV 221 Query: 277 AAGTSHFR 284 G + +R Sbjct: 222 PVGLTKYR 229 >gi|163785257|ref|ZP_02179923.1| lysine 2,3-aminomutase related protein [Hydrogenivirga sp. 128-5-R1-1] gi|159879475|gb|EDP73313.1| lysine 2,3-aminomutase related protein [Hydrogenivirga sp. 128-5-R1-1] Length = 105 Score = 59.0 bits (142), Expect = 1e-06, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Query: 1 MQLRHKTLTSAQDLYNANL-IKKEQIDEIKEISNHYSIALTPVIAN-LINPHNP-NDPIA 57 M+ + T S +D+ + ++QI +I+ +S + + + LIN NP DPI Sbjct: 1 MRYKTYTAKSFKDIPQVKKYLTEQQIFDIEVVSRVFPFKVNNYVIEKLINWGNPLEDPIF 60 Query: 58 RQFIPQKEELNILPEER 74 R PQ+ L + Sbjct: 61 RLTFPQRGMLQDEDYYK 77 >gi|253578392|ref|ZP_04855664.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850710|gb|EES78668.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 460 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 40/161 (24%), Positives = 65/161 (40%), Gaps = 38/161 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C +C FCF +M + T+ D ++ L+++Q V T + Sbjct: 83 LMDEYRSCSNHCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 132 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 S L +I++FH V Q +NP+L + L H Sbjct: 133 SDYDLD------------RIIKFHLSPINVSFQTMNPKLRCKML-----------H---- 165 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 F+ +A+A + RL + + Q VL KGIND E+ +L Sbjct: 166 NRFAGDALAKVDRLYKGDVTMNGQIVLCKGINDRDELEYSL 206 >gi|94985862|ref|YP_605226.1| molybdenum cofactor biosynthesis protein A [Deinococcus geothermalis DSM 11300] gi|94556143|gb|ABF46057.1| Molybdenum cofactor biosynthesis protein A [Deinococcus geothermalis DSM 11300] Length = 333 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 72/183 (39%), Gaps = 32/183 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C + C +C E+ G + +L+ ++ E + ++ TGG+ Sbjct: 15 ISVTDRCNLRCTYCMPAEVFGPDYAFLPRTELLTFEEIERLARAF-VDLGVRKLRLTGGE 73 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC-LKE---------- 202 PL+ L +++ L I V+ + + + P R+ +L + LK Sbjct: 74 PLLRRD--LPELVARLGRIAGVEDIALTTNGLL-LP-RLAADLQRAGLKRVTVSLDSLDP 129 Query: 203 --AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 G+ + +H P + AA+ AG+ + +V+ +G+ND E L L Sbjct: 130 EVFGRMNGLNVH---PQRVLDGIEAALQ----AGLSVKVNTVVQRGVND--EGLRELWLA 180 Query: 261 FVE 263 E Sbjct: 181 LRE 183 >gi|291546331|emb|CBL19439.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus sp. SR1/5] Length = 462 Score = 58.6 bits (141), Expect = 1e-06, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 65/161 (40%), Gaps = 38/161 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ Y ++ + F G+ + L Sbjct: 85 LMDDYRSCSNKCMFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYVTL 131 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 ++ + + +++R+H + Q +NPEL + L H Sbjct: 132 TNMSEKDI---------ERVIRYHLEPINISFQAMNPELRCKML-----------H---- 167 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 F+ +A+ + L NAGI + Q VL KG+ND E+ +L Sbjct: 168 NRFAGKALDKVDMLYNAGITMNGQIVLCKGVNDGDELEYSL 208 >gi|254302942|ref|ZP_04970300.1| 2-methylthioadenine synthetase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148323134|gb|EDK88384.1| 2-methylthioadenine synthetase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 435 Score = 57.0 bits (137), Expect = 5e-06, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153 R +K+ C +C +C K ++ + + E EVI G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202 Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + +L+ + IK+++ +R S V P +I I+ K K + Sbjct: 203 SAYGEDFKEKDNFESLLEEILKIKNLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275 >gi|291519254|emb|CBK74475.1| RNA modification enzyme, MiaB family [Butyrivibrio fibrisolvens 16/4] Length = 382 Score = 56.7 bits (136), Expect = 5e-06, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C +C +C + + S+D E + + + EV+ TG Sbjct: 88 HTRAFVKVQDGCNQFCSYC-----IIPFARGRIRSRDIEDVVEEVTGLATNGYKEVVITG 142 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + L +L+ + I V+ +R S ++PQ + E + + K Sbjct: 143 IHLSSYGNGTDYNLADLLEAIEKIDGVERIRLGS----LEPQIVTEEFAKRVSALSK--- 195 Query: 209 IAIHA 213 + H Sbjct: 196 MCPHF 200 >gi|256845484|ref|ZP_05550942.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_36A2] gi|256719043|gb|EEU32598.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_36A2] Length = 435 Score = 55.9 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153 R +K+ C +C +C K ++ + + E EVI G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202 Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + +L+ + IK ++ +R S V P +I I+ K K + Sbjct: 203 SAYGKDFKEKDNFESLLEEILKIKDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275 >gi|237742211|ref|ZP_04572692.1| Fe-S oxidoreductase [Fusobacterium sp. 4_1_13] gi|229429859|gb|EEO40071.1| Fe-S oxidoreductase [Fusobacterium sp. 4_1_13] Length = 435 Score = 55.9 bits (134), Expect = 9e-06, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153 R +K+ C +C +C K ++ + + E EVI G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202 Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + +L+ + IK ++ +R S V P +I I+ K K + Sbjct: 203 SAYGKDFKEKDNFESLLEEILKIKDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275 >gi|14520767|ref|NP_126242.1| molybdenum cofactor biosynthesis protein a related [Pyrococcus abyssi GE5] gi|5457983|emb|CAB49473.1| mooA-like molybdenum cofactor biosynthesis protein A related [Pyrococcus abyssi GE5] Length = 419 Score = 55.5 bits (133), Expect = 1e-05, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 37/186 (19%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKS 142 G++ R + I ++ C + C FC E S+ + D + L + ++ Sbjct: 108 GLIDRGTNLIQVRGSTGCNMRCIFCSVDEGPYSRTRKLDFVVDIDYLLKWFDWVAKEKGK 167 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + + G+PL+ + ++++ LR HV ++ S + +N +L++ L E Sbjct: 168 GLEAHLDAQGEPLLYP--FIVELVQALREHPHVSVISMQSNGVL-----LNDKLVEELAE 220 Query: 203 AGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 AG V ++IH NH E +E L NAGI +L V++ Sbjct: 221 AGLDRVNLSIHSLDPEKAKMLMGIKDYDLNHVLEMAEA-------LVNAGIDVLIAPVIM 273 Query: 245 KGINDD 250 G+NDD Sbjct: 274 FGVNDD 279 >gi|255523321|ref|ZP_05390291.1| molybdenum cofactor biosynthesis protein A [Clostridium carboxidivorans P7] gi|255512975|gb|EET89245.1| molybdenum cofactor biosynthesis protein A [Clostridium carboxidivorans P7] Length = 318 Score = 55.1 bits (132), Expect = 2e-05, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 70/164 (42%), Gaps = 23/164 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDPLI 156 + L C + C +C + V + V+ ++ + I ++ +TGG+PLI Sbjct: 14 ISLTDRCNLRCIYCMPEQGVSKKCHEDVIRFEEVLKIIK--SAVPLGIKKIRYTGGEPLI 71 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 L + + ++ I+ ++ + + ++ +L LKEAG + I + Sbjct: 72 LKN--ISSLISETSKIQQIKDIAITTNGILLY------DLADELKEAGLK-RVNISLDTL 122 Query: 217 YE-----FS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + + + AI + + GI + +VL+KGINDD Sbjct: 123 KEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDD 166 >gi|262376486|ref|ZP_06069715.1| molybdenum cofactor biosynthesis protein A [Acinetobacter lwoffii SH145] gi|262308625|gb|EEY89759.1| molybdenum cofactor biosynthesis protein A [Acinetobacter lwoffii SH145] Length = 341 Score = 54.7 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 65/160 (40%), Gaps = 15/160 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C K +LS + A ++ I ++ TGG+PL+ Sbjct: 26 ISVTDRCNFKCSYCMPEHPQWMNKKDLLSFEALYAFCEFMVRH-GIEQIRVTGGEPLM-- 82 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPY 217 + + + L+ +K + + R + + Q LK AG + I++ + P Sbjct: 83 RQGIIHFIARLQTLKAIGLKRIS----MTSNGHYLADYAQPLKRAGLDDLNISLDSLDPK 138 Query: 218 EFSEEAIAAIS-------RLANAGIILLSQSVLLKGINDD 250 +F + + AG+ + SVL+KGIND+ Sbjct: 139 QFQQLTQKQLQPVLQGISAAQQAGLTVKINSVLIKGINDN 178 >gi|294785210|ref|ZP_06750498.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_27] gi|294486924|gb|EFG34286.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_27] Length = 435 Score = 54.7 bits (131), Expect = 2e-05, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153 R +K+ C +C +C K ++ + + E EVI G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202 Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + +L+ + IK ++ +R S V P +I I+ K K + Sbjct: 203 SAYGKDFKEKDNFESLLEDILKIKDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275 >gi|317497456|ref|ZP_07955776.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium 5_1_63FAA] gi|316895242|gb|EFV17404.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium 5_1_63FAA] Length = 440 Score = 54.3 bits (130), Expect = 2e-05, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 15/136 (11%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 E D D + L + R +K+ C +C +C G + + ++ Sbjct: 128 EVIDIAHDQEYESLHVEQLKEHTRAYIKVQDGCNQFCSYCIIPYARGRVRSRKM--EEVL 185 Query: 133 AALAYIQEKSQ----IWEVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + I + T G D L L +L+ + I V+ +R S Sbjct: 186 EEITNLTKHGCQEFVITGIHVTSYGKD---LGDVTLTDLLEEIAKIPEVKRIRLGS---- 238 Query: 187 VDPQRINPELIQCLKE 202 ++P I + + L + Sbjct: 239 LEPGFITKDTLDRLSK 254 >gi|222100438|ref|YP_002535006.1| hypothetical protein CTN_1464 [Thermotoga neapolitana DSM 4359] gi|221572828|gb|ACM23640.1| Putative uncharacterized protein [Thermotoga neapolitana DSM 4359] Length = 319 Score = 54.0 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 49/232 (21%), Positives = 85/232 (36%), Gaps = 32/232 (13%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI- 156 + C C FC + + G K V S D + + S+ +E+ F GG Sbjct: 6 VFLPYAGCRKRCVFCDQVKATGQVK--VPSLDDIAQLIEEYSKTSKEYELGFYGG-TFTG 62 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 LS +++++ L +R V+ +R +R P + E ++ LK+ + Sbjct: 63 LSEQKMEEYLSFVRRFPVVKSIRISTR-----PDEVTVEKLEILKKYDVETIEVGVQSFS 117 Query: 217 YEF---------SEEAIAAISRLANAGIILLSQSV-LLKGI---NDDPEILANLMRTFVE 263 E S+EA A + G L SV L+ G+ + + EIL+ L Sbjct: 118 DEVLEASKRGYTSDEAEKACKLIKKMGFRL---SVHLMVGLPKSSREGEILSALRTIECG 174 Query: 264 L---RIKPYYLH----HPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 RI P + + + + L +EE I + L + G Sbjct: 175 ADLVRIHPTLVFEGTELHRMMEASQYSPLDLEEAIDICSDLVCILEGWGVRV 226 >gi|291559329|emb|CBL38129.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium SSC/2] Length = 440 Score = 54.0 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 15/136 (11%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 E D D + L + R +K+ C +C +C G + + ++ Sbjct: 128 EVIDIAHDQEYESLHVEQLKEHTRAYIKVQDGCNQFCSYCIIPYARGRVRSRKM--EEVL 185 Query: 133 AALAYIQEKSQ----IWEVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + I + T G D L L +L+ + I V+ +R S Sbjct: 186 EEITNLTKHGCQEFVITGIHVTSYGKD---LGDVTLIDLLEEIAKIPEVKRIRLGS---- 238 Query: 187 VDPQRINPELIQCLKE 202 ++P I + + L + Sbjct: 239 LEPGFITKDTLDRLSK 254 >gi|315425435|dbj|BAJ47099.1| molybdenum cofactor biosynthesis protein A [Candidatus Caldiarchaeum subterraneum] Length = 347 Score = 54.0 bits (129), Expect = 3e-05, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 94/253 (37%), Gaps = 36/253 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C FC V +L+ ++ + I + +V +GG+PL+ Sbjct: 33 LSVTDRCNFRCDFCMPLHPVWIPHKEILTYEEMARVIR-ILVGMNVTKVRLSGGEPLMRR 91 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPY 217 L+K +K + I V+ + + E LKEAG V +++H+ P Sbjct: 92 D--LEKGVKLISSIPGVETISMTTNG------YFLEEKAAQLKEAGLQSVTVSLHSLKPE 143 Query: 218 EFSEEAIAA---------ISRLANAGI-ILLSQSVLLKGINDDPEI-LANL-MRTFVELR 265 F + + G+ + V+ +G NDD + L ++ +R Sbjct: 144 RFEKIVGRKDVFSKVLDGLREAKKVGLQPIKINCVVTRGCNDDEILDFVELGRQSGFSIR 203 Query: 266 IKPYYLHHPDLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDT 324 Y G + ++ + G +I+ ++EK GL ++LP G + Sbjct: 204 FIEY-----MPFDGRHLWDVSRLVPGMEIIEKIREKY-GL------VELPREPGSTAV-V 250 Query: 325 HNIKKVGNGSYCI 337 + +G+ + Sbjct: 251 YEFADGADGNVAV 263 >gi|167767374|ref|ZP_02439427.1| hypothetical protein CLOSS21_01893 [Clostridium sp. SS2/1] gi|167711349|gb|EDS21928.1| hypothetical protein CLOSS21_01893 [Clostridium sp. SS2/1] Length = 440 Score = 54.0 bits (129), Expect = 4e-05, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 48/136 (35%), Gaps = 15/136 (11%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 E D D + L + R +K+ C +C +C G + + ++ Sbjct: 128 EVIDIAHDQEYESLHVEQLKEHTRAYIKVQDGCNQFCSYCIIPYARGRVRSRKM--EEVL 185 Query: 133 AALAYIQEKSQ----IWEVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + + I + T G D L L +L+ + I V+ +R S Sbjct: 186 EEITNLTKHGCQEFVITGIHVTSYGKD---LGDVTLIDLLEEIAKIPEVKRIRLGS---- 238 Query: 187 VDPQRINPELIQCLKE 202 ++P I + + L + Sbjct: 239 LEPGFITKDTLDRLSK 254 >gi|78060080|ref|YP_366655.1| GTP cyclohydrolase subunit MoaA [Burkholderia sp. 383] gi|77964630|gb|ABB06011.1| GTP cyclohydrolase subunit MoaA [Burkholderia sp. 383] Length = 374 Score = 53.6 bits (128), Expect = 4e-05, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 58/233 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154 L ++ C C +C RE G+ + SS+ A L I + ++ TGG+P Sbjct: 46 LSVIDQCNFRCGYCMPRESFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEP 105 Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192 L+ + L+ +++ L + V + LR SRV + I Sbjct: 106 LL--RRNLEALIERLAALTTVDGKPVEIALTTNGSLLAAKARTLRDAGLSRVTVSL-DAI 162 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251 + + + + +A PV + A I AG + +V+ +G+NDD Sbjct: 163 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGVNDD- 208 Query: 252 EILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296 + L+R F + + Y G S + + ++++ Sbjct: 209 -QILPLVRHFRQSGVAVRFIEY-----MDVGGASFWSGDKVVPAARMRELIDE 255 >gi|95929921|ref|ZP_01312661.1| molybdenum cofactor synthesis-like [Desulfuromonas acetoxidans DSM 684] gi|95133890|gb|EAT15549.1| molybdenum cofactor synthesis-like [Desulfuromonas acetoxidans DSM 684] Length = 325 Score = 53.6 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 20/172 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + CR+C V VLS ++ + I ++ TGG+PL+ Sbjct: 16 LSVTDRCNMRCRYCMPAHGVEKVTHDDVLSYEELYRISQA-AVTTGIEKIRVTGGEPLV- 73 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYI---AIHA 213 K + L+ L I ++ L + + E+ LK+AG K + + +++A Sbjct: 74 -RKGIVPFLERLSRIDGLKQLVLTTNGL------MLDEMAYDLKQAGVKHLNVSLDSLNA 126 Query: 214 NHPYEFS--EEAIAAISRLANA---GIILLSQSVLLKGINDDP-EILANLMR 259 N E + + ++ LA A G+ + V+++G+ND E A L R Sbjct: 127 NTFAEVTRGANLVKVLAGLAAAERVGLPVKLNMVVMRGVNDHEIERFAELTR 178 >gi|313904193|ref|ZP_07837572.1| protein of unknown function DUF512 [Eubacterium cellulosolvens 6] gi|313470995|gb|EFR66318.1| protein of unknown function DUF512 [Eubacterium cellulosolvens 6] Length = 461 Score = 53.6 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 35/161 (21%), Positives = 64/161 (39%), Gaps = 36/161 (22%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q V T D Sbjct: 84 LMDNYKSCRNKCVFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YVTLTNMD---- 134 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 + ++++ ++ + I V +P+ L++ +H H Sbjct: 135 -DHDIDRIIR--YRMEPINI-----SVQTTNPE---------LRKT------MLHNRHAG 171 Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 E + RLA+AGI + Q VL KG+ND E+ ++ Sbjct: 172 EIFP----KLRRLADAGIEMNGQIVLCKGLNDGEELERSIR 208 >gi|317471603|ref|ZP_07930947.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp. 3_2_56FAA] gi|316900918|gb|EFV22888.1| molybdenum cofactor biosynthesis protein A [Anaerostipes sp. 3_2_56FAA] Length = 324 Score = 53.6 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 39/169 (23%), Positives = 72/169 (42%), Gaps = 21/169 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + CR+C ++ + +LS ++ + I + TGG+PL+ Sbjct: 14 ISVTDRCNLRCRYCMPEDIPSVEHTDILSYEELLSICES-AADLGICKFKITGGEPLV-- 70 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215 K ++ L+ + V+ + S +++P ++ LKEAG I I + Sbjct: 71 RKGCAGFIERLKQLPGVRQVTLTSNGLLLEPY------LERLKEAGID-GINISLDTLDE 123 Query: 216 --PYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 E + ++A+ A G+ V++KGINDD EIL L Sbjct: 124 KKYKEITGKTGVQTVLSAVRNSARMGLNTKVNCVVMKGINDD-EILDLL 171 >gi|254173709|ref|ZP_04880381.1| metallo cofactor biosynthesis protein [Thermococcus sp. AM4] gi|214032401|gb|EEB73231.1| metallo cofactor biosynthesis protein [Thermococcus sp. AM4] Length = 400 Score = 53.6 bits (128), Expect = 5e-05, Method: Composition-based stats. Identities = 37/208 (17%), Positives = 84/208 (40%), Gaps = 26/208 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FT 150 R P + + C + C+ C R E + LS+++ +A + + + + + ++ T Sbjct: 13 RKPVLVFWETTKACQLKCKHC-RAEAILQALPGELSTEEGKALIDSLTDFGRPYPILILT 71 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GGDPL+ + L + +R P V P + E I+ + +G ++ Sbjct: 72 GGDPLMRKD------IFELIDYAVEKGVRVGL-APAVTP-LLTEETIERIARSGVK-AVS 122 Query: 211 IHANHP----------YEFSEE-AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 I + P E + E + AI G+ + +V+++ + E L +++ Sbjct: 123 ISLDSPFPDVHDAIRGIEGTWEKTVWAIKEFLKHGLSVQVNTVVMR---ETVEGLPEMVK 179 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTI 287 +L ++ + + + G +F + Sbjct: 180 LLKDLGVEIWEVFYLVPT-GRGNFESDL 206 >gi|326434948|gb|EGD80518.1| molybdenum cofactor synthesis 1 isoform 2 [Salpingoeca sp. ATCC 50818] Length = 399 Score = 53.2 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 32/178 (17%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146 G H Y + + L C + C++C E V S K +L+ + LA I + + + Sbjct: 82 GRQHSY---LRISLTERCNLRCQYCMPEEGVQLSPKDELLTFDELVR-LARIFASNGVSK 137 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 + TGG+PL+ +L +++ R + ++ + + + LK+AG Sbjct: 138 IRLTGGEPLLYP--QLSDLIREFRGMPGIESVGITTNGLT------LARKLDALKDAGL- 188 Query: 207 VYIAIHAN------HPYEFSEEAIAA--------ISRLANAGIILLSQSVLLKGINDD 250 H N H ++F+ + I +AG+ VL + +NDD Sbjct: 189 ----THLNVSLDTFHEHKFNIISRRRGLDRVFRGIDAAIDAGLTPKINVVLTRNVNDD 242 >gi|331081966|ref|ZP_08331094.1| hypothetical protein HMPREF0992_00018 [Lachnospiraceae bacterium 6_1_63FAA] gi|330405561|gb|EGG85091.1| hypothetical protein HMPREF0992_00018 [Lachnospiraceae bacterium 6_1_63FAA] Length = 460 Score = 53.2 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 68/188 (36%), Gaps = 41/188 (21%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q V T + Sbjct: 83 LMDEYRSCRNKCVFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 132 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 S + +I+ +H + Q NP+L + L Sbjct: 133 SDHDID------------RIIHYHLAPINISFQTTNPKLRCKMLN--------------- 165 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 F+ + + RL AGI + Q VL KG+ND E+ ++ + P+ + Sbjct: 166 NRFAGDIFPKVQRLFEAGIEMNGQIVLCKGLNDKAELERSICDL---TQYLPHLRSVSVV 222 Query: 277 AAGTSHFR 284 G S +R Sbjct: 223 PVGLSKYR 230 >gi|296328428|ref|ZP_06870954.1| 2-methylthioadenine synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154502|gb|EFG95294.1| 2-methylthioadenine synthetase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 435 Score = 53.2 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153 R +K+ C +C +C K ++ + + E E+I G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEIILIGIDL 202 Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + +L+ + IK ++ +R S V P +I I+ K K + Sbjct: 203 SAYGEDFEEKDNFESLLEDILRIKDLKRVRIGS----VYPDKITDRFIELFK--NKKLMP 256 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275 >gi|19704549|ref|NP_604111.1| Fe-S oxidoreductase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19714835|gb|AAL95410.1| Fe-S oxidoreductase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 435 Score = 53.2 bits (127), Expect = 6e-05, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153 R +K+ C +C +C K ++ + + E E+I G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEIILIGIDL 202 Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + +L+ + IK ++ +R S V P +I I+ K K + Sbjct: 203 SAYGEDFEEKDNFESLLEDILRIKDLKRVRIGS----VYPDKITDRFIELFK--NKKLMP 256 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275 >gi|332797327|ref|YP_004458827.1| Radical SAM domain-containing protein [Acidianus hospitalis W1] gi|332695062|gb|AEE94529.1| Radical SAM domain protein [Acidianus hospitalis W1] Length = 396 Score = 53.2 bits (127), Expect = 7e-05, Method: Composition-based stats. Identities = 45/235 (19%), Positives = 99/235 (42%), Gaps = 35/235 (14%) Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTV 125 +PEE +D I + + + ++ +L L L + C C +CF++ + + Sbjct: 38 EVPEELKDIIEEGFSATFDEFLQKFKKEVLEPTLVLTYRCNFDCVYCFQKAF---RNNSS 94 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 +S K + Y++ + +V T GG+PL L +R++++ L +K+ S Sbjct: 95 VSDKVVRGFIKYVRTHANGRKVRVTYFGGEPL-LELRRIKEISTQLSDLKY-------SF 146 Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS---- 239 + + + + LK G ++ I + P E ++ + + IIL + Sbjct: 147 SIVTNGSLLTRHVFDELKSLGLT-HVQITLDGPREVHDKRRYFVGGKGSYDIILKNLKEI 205 Query: 240 Q---SVLLKGIN---DDPEILANLMRTFVELRIK-----PYYLHHPDLAAGTSHF 283 Q +V+L+ +N ++ + +L+R + I P+ +H D ++ Sbjct: 206 QDEVNVVLR-VNIDVNNLDSFRDLLRDLKQNGITKVRLDPHLVH--DNVFRNEYW 257 >gi|260588685|ref|ZP_05854598.1| PDZ domain protein [Blautia hansenii DSM 20583] gi|260541160|gb|EEX21729.1| PDZ domain protein [Blautia hansenii DSM 20583] Length = 460 Score = 52.8 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 68/188 (36%), Gaps = 41/188 (21%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q V T + Sbjct: 83 LMDEYRSCRNKCVFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 132 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 S + +I+ +H + Q NP+L + L Sbjct: 133 SDHDID------------RIIHYHLAPINISFQTTNPKLRCKMLN--------------- 165 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 F+ + + RL AGI + Q VL KG+ND E+ ++ + P+ + Sbjct: 166 NRFAGDIFPKVQRLFEAGIEMNGQIVLCKGLNDKAELERSICDL---TQYLPHLRSVSVV 222 Query: 277 AAGTSHFR 284 G S +R Sbjct: 223 PVGLSKYR 230 >gi|313114943|ref|ZP_07800439.1| putative FeS-containing Cyanobacterial-specific oxidoreductase [Faecalibacterium cf. prausnitzii KLE1255] gi|310622736|gb|EFQ06195.1| putative FeS-containing Cyanobacterial-specific oxidoreductase [Faecalibacterium cf. prausnitzii KLE1255] Length = 441 Score = 52.8 bits (126), Expect = 7e-05, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 48/167 (28%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156 H C +C FCF ++ + ++ D E YI Sbjct: 80 QKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 125 Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 + + +++K H+ + H+ +PQ ++ L Sbjct: 126 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 162 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 E + + RL GI + Q VL +GIND E+ L Sbjct: 163 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGINDGDELRRTLSDLL 204 >gi|291550924|emb|CBL27186.1| Fe-S oxidoreductase, related to NifB/MoaA family [Ruminococcus torques L2-14] Length = 459 Score = 52.8 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 41/188 (21%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ H C C FCF +M + T+ Y ++ + F G+ + L Sbjct: 84 LMDEYHSCHNKCIFCFIDQMPPGMRDTL-----------YFKDDDS--RLSFLQGNYVTL 130 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 ++ + +I+R+ + Q NPEL + L H Sbjct: 131 TN---------MSEKDMNRIVRYRLEPINISFQTTNPELRCKML-----------H---- 166 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 F+ EA+ + L GI + Q VL +G+ND E+ ++ R + P + Sbjct: 167 NRFAGEALKKVDILYQGGIEMNGQIVLCRGVNDGEELERSI-RDLTQ--YLPLLRSVSVV 223 Query: 277 AAGTSHFR 284 G S +R Sbjct: 224 PVGLSKYR 231 >gi|269215395|ref|ZP_06159249.1| Fe-S oxidoreductase, NifB/MoaA family [Slackia exigua ATCC 700122] gi|269130882|gb|EEZ61957.1| Fe-S oxidoreductase, NifB/MoaA family [Slackia exigua ATCC 700122] Length = 457 Score = 52.8 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 62/181 (34%), Gaps = 46/181 (25%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 D + + C C FCF R++ + +++ D + Q T Sbjct: 93 DGAIFDDIKTCRNACVFCFMRQLPADARDSLMLRDD-----DWRLSFLQGNFTSLTA--- 144 Query: 155 LILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 L+ + ++++ HV LR H I PE+ + I H Sbjct: 145 --LTDEEADEIIER-----HVSPLRVSLHC---------ITPEV--------RRTMIGRH 180 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL-----MRTFVELRIK 267 A H E + +L GI + Q VL+ GIND E++ L + I Sbjct: 181 APHGVEM-------MEKLLAGGIEMYMQIVLVPGINDGRELMKTLTWAYTHEGIANVGIV 233 Query: 268 P 268 P Sbjct: 234 P 234 >gi|262068261|ref|ZP_06027873.1| Fe-S oxidoreductase [Fusobacterium periodonticum ATCC 33693] gi|291377999|gb|EFE85517.1| Fe-S oxidoreductase [Fusobacterium periodonticum ATCC 33693] Length = 439 Score = 52.8 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153 R +K+ C +C +C K ++ + + E EVI G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202 Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + +L+ + IK ++ +R S V P +I + I K K + Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIKDLKRVRIGS----VYPDKITDKFIDLFK--NKNLMP 256 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275 >gi|237740317|ref|ZP_04570798.1| Fe-S oxidoreductase [Fusobacterium sp. 2_1_31] gi|229422334|gb|EEO37381.1| Fe-S oxidoreductase [Fusobacterium sp. 2_1_31] Length = 439 Score = 52.8 bits (126), Expect = 8e-05, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153 R +K+ C +C +C K ++ + + E EVI G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202 Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + +L+ + IK ++ +R S V P +I + I K K + Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIKDLKRVRIGS----VYPDKITDKFIDLFK--NKNLMP 256 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275 >gi|298675037|ref|YP_003726787.1| radical SAM domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298288025|gb|ADI73991.1| Radical SAM domain protein [Methanohalobium evestigatum Z-7303] Length = 315 Score = 52.8 bits (126), Expect = 9e-05, Method: Composition-based stats. Identities = 46/242 (19%), Positives = 81/242 (33%), Gaps = 58/242 (23%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H++ R+ L + C + C++C R G + + E ++E Sbjct: 33 QHKF-GRMHLAVAPKCNIQCKYCIRDNDCVNECRPGVTSKVLTPQEALEKTRQVLEEHPF 91 Query: 144 IWEVIFTG-GDPLILSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 I + G GDPL + + + K++K +V I+ + P RI+ L Sbjct: 92 IKVIAIAGPGDPL-ANDETFETFKLIKE--EFPNV-IICMSTNGLA-LPDRIDDML---- 142 Query: 201 KEAGKPVYIAIHANHPY-EFSEEAIAA------------------------ISRLANAGI 235 +AG N E + I R AGI Sbjct: 143 -DAGVQTLTVT-VNAVDPEIQRQICDRVVYNGKLYKGKEAAELLINNQLEGIKRAIEAGI 200 Query: 236 ILLSQSVLLKGINDD--PEILANLMR-TFVELRIKPYYLHHPDLAAGTSH--FRLTIEEG 290 ++ +VL+ +NDD +I + + I P L + +R+ EE Sbjct: 201 VIKINTVLVPDVNDDHVVDIAKKMNELGVFIMNIMP-------LIPQAEYAEWRVPTEEE 253 Query: 291 QK 292 +K Sbjct: 254 RK 255 >gi|34763184|ref|ZP_00144150.1| Fe-S OXIDOREDUCTASE (1.8.-.-) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887153|gb|EAA24258.1| Fe-S OXIDOREDUCTASE (1.8.-.-) [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 435 Score = 52.4 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153 R +K+ C +C +C K ++ + + E EVI G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202 Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + +L+ + IK ++ +R S V P +I I+ K + + Sbjct: 203 SAYGKDFKEKDNFESLLEDILKIKDLKRVRIGS----VYPDKITDRFIELFK--NENLMP 256 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275 >gi|14591390|ref|NP_143468.1| hypothetical protein PH1615 [Pyrococcus horikoshii OT3] gi|3258044|dbj|BAA30727.1| 420aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 420 Score = 52.4 bits (125), Expect = 9e-05, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 37/186 (19%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKS 142 G++ R + I ++ C + C FC E S+ + D + + + ++ Sbjct: 108 GLIDRGTNLIQVRGSTGCNMSCIFCSVDEGPYSRTRKLDFVVDIDYLMKWFNLVAKEKGK 167 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + + G+PL+ + ++++ LR HV ++ S + ++ +L++ L E Sbjct: 168 GLEAHLDAQGEPLMYP--FIVELVQALRDHPHVSVISMQSNGVL-----LDDKLVEELAE 220 Query: 203 AGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 AG V ++IH +H E +E L NAGI +L V++ Sbjct: 221 AGLDRVNLSIHSLDPKKAKMLMGIKDYDLSHVLEMAEA-------LVNAGIDVLIAPVII 273 Query: 245 KGINDD 250 GINDD Sbjct: 274 FGINDD 279 >gi|328555376|gb|AEB25868.1| molybdenum cofactor biosynthesis protein A [Bacillus amyloliquefaciens TA208] gi|328913747|gb|AEB65343.1| molybdenum cofactor biosynthesis protein A [Bacillus amyloliquefaciens LL3] Length = 341 Score = 52.4 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 29/176 (16%) Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143 DR L + + C C +C E+ G K +LS ++ E + Sbjct: 11 KRDRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLQKTELLSFEELERLAKLFVGRFG 70 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIV---DPQ----RIN 193 + ++ TGG+PL+ + ++++ L I ++ + S +P+ Q R+ Sbjct: 71 VEKIRLTGGEPLMRKD--MPELIRKLARIPGLKDIAMTTNGSLLPVYAEKLKQAGLHRVT 128 Query: 194 PELIQCLKEAGKPVY-IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 L E K + + N + + I AG+ + V+ KG+N Sbjct: 129 VSLDSLEDERFKAINGRGVSVN-------KVLEGIEAAKEAGLGVKINMVVQKGVN 177 >gi|308175399|ref|YP_003922104.1| molybdenum cofactor biosynthesis protein A [Bacillus amyloliquefaciens DSM 7] gi|307608263|emb|CBI44634.1| molybdenum cofactor biosynthesis protein A [Bacillus amyloliquefaciens DSM 7] Length = 344 Score = 52.4 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 29/176 (16%) Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143 DR L + + C C +C E+ G K +LS ++ E + Sbjct: 11 KRDRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLQKTELLSFEELERLAKLFVGRFG 70 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIV---DPQ----RIN 193 + ++ TGG+PL+ + ++++ L I ++ + S +P+ Q R+ Sbjct: 71 VEKIRLTGGEPLMRKD--MPELIRKLARIPGLKDIAMTTNGSLLPVYAEKLKQAGLHRVT 128 Query: 194 PELIQCLKEAGKPVY-IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 L E K + + N + + I AG+ + V+ KG+N Sbjct: 129 VSLDSLEDERFKAINGRGVSVN-------KVLEGIEAAKEAGLGVKINMVVQKGVN 177 >gi|260494169|ref|ZP_05814300.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_33] gi|260198315|gb|EEW95831.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Fusobacterium sp. 3_1_33] Length = 435 Score = 52.4 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153 R +K+ C +C +C K ++ + + E EVI G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202 Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + +L+ + I+ ++ +R S V P +I I+ K K + Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIRDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275 >gi|256027911|ref|ZP_05441745.1| Fe-S oxidoreductase [Fusobacterium sp. D11] gi|289765860|ref|ZP_06525238.1| fe-s oxidoreductase [Fusobacterium sp. D11] gi|289717415|gb|EFD81427.1| fe-s oxidoreductase [Fusobacterium sp. D11] Length = 435 Score = 52.4 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153 R +K+ C +C +C K ++ + + E EVI G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202 Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + +L+ + I+ ++ +R S V P +I I+ K K + Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIRDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275 >gi|237744247|ref|ZP_04574728.1| Fe-S oxidoreductase [Fusobacterium sp. 7_1] gi|229431476|gb|EEO41688.1| Fe-S oxidoreductase [Fusobacterium sp. 7_1] Length = 435 Score = 52.4 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 24/140 (17%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD- 153 R +K+ C +C +C K ++ + + E EVI G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGIDL 202 Query: 154 PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + +L+ + I+ ++ +R S V P +I I+ K K + Sbjct: 203 SAYGEDFEEKDSFESLLEDILKIRDLKRVRIGS----VYPDKITDRFIELFK--NKNLMP 256 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 HLHIS-LQSCDDTVLKNMRR 275 >gi|255322313|ref|ZP_05363459.1| conserved hypothetical protein [Campylobacter showae RM3277] gi|255300686|gb|EET79957.1| conserved hypothetical protein [Campylobacter showae RM3277] Length = 429 Score = 52.4 bits (125), Expect = 1e-04, Method: Composition-based stats. Identities = 42/212 (19%), Positives = 79/212 (37%), Gaps = 35/212 (16%) Query: 63 QKEELNILPEEREDPIGDNNH--SPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREMV 118 K+E + +DP + + S K IV Y + +K+ C C +C + Sbjct: 109 SKKEDINALLKSQDPFFELGNLKSIDKNIVTNYENHTKAFIKIQEGCDFACSYCI----I 164 Query: 119 GSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIK 173 + +G S + EA L I + E++ TG + L ++L L I Sbjct: 165 PAVRGKARSMDE-EAILREAKILAYNGYNELVLTGTNIGSYGKDTGSSLGRLLGRLGKIG 223 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 ++ +R S ++P +I+ + L+E+ ++ I H E A+ R+ Sbjct: 224 GIKRIRLGS----IEPSQIDESFREILRESWLERHLHIALQHTSE-------AMLRIMRR 272 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELR 265 +Q+ D E+ L + L Sbjct: 273 ----RNQAF------RDLELFLELSQMGFALG 294 >gi|154175462|ref|YP_001408235.1| hypothetical protein CCV52592_1067 [Campylobacter curvus 525.92] gi|112802784|gb|EAU00128.1| conserved hypothetical protein [Campylobacter curvus 525.92] Length = 416 Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 39/179 (21%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + ++++ AA Y E++ Sbjct: 132 HTKAFIKIQEGCNFACSYCIIPSVRGKARSMDENSIINEAKILAANGY-------NELVL 184 Query: 150 TGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L ++L L I ++ +R S ++P +I+ + LKE+ Sbjct: 185 TGTNIGSYGKDTGSSLGRLLANLGKIPGIRRIRLGS----IEPSQIDESFREILKESWLE 240 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 ++ I H E + R+ +Q+ +D L L Sbjct: 241 RHLHIALQHTSE-------KMLRIMRR----RNQA-----FSD-----LELFNELSSLG 278 >gi|302386478|ref|YP_003822300.1| protein of unknown function DUF512 [Clostridium saccharolyticum WM1] gi|302197106|gb|ADL04677.1| protein of unknown function DUF512 [Clostridium saccharolyticum WM1] Length = 459 Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 47/176 (26%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q V T + Sbjct: 82 LMSEYRSCRNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 131 Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 S + +++K L I + H+ P + Q L H Sbjct: 132 SDHDIDRIIKFKLAPI----NISVHTTNPSL--------RCQML-----------H---- 164 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE---ILANLMRTFVELRIKPY 269 F+ +A+ I +L A I + Q VL KG+ND E + +L + PY Sbjct: 165 NRFAGKALEKIQKLYEAEIPMNGQIVLCKGVNDGKELERTIEDLSKFL------PY 214 >gi|331085847|ref|ZP_08334930.1| hypothetical protein HMPREF0987_01233 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330406770|gb|EGG86275.1| hypothetical protein HMPREF0987_01233 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 448 Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 41/188 (21%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q + T + Sbjct: 92 LMDEYRSCRNKCMFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 141 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 S + ++++ +H + NPEL + L H Sbjct: 142 SDHDIDRIVQ------------YHLEPINISFHTTNPELRCKML-----------H---- 174 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 F+ +A+ + L GI + Q VL KGIND E+ ++ P+ + Sbjct: 175 NRFAGDALKKVQTLYEGGITMNGQIVLCKGINDGEELERSIRD---MTAYLPHLQSVSVV 231 Query: 277 AAGTSHFR 284 G + FR Sbjct: 232 PVGLTKFR 239 >gi|145220160|ref|YP_001130869.1| GTP cyclohydrolase subunit MoaA [Prosthecochloris vibrioformis DSM 265] gi|145206324|gb|ABP37367.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeovibrioides DSM 265] Length = 351 Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 18/170 (10%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAALAYIQEKSQIWEVIF 149 HR + + C + C +C R E G T +S + ++ + E + I ++ Sbjct: 32 HRQVSYARIAVTGACNLRCAYCMREEHESDSSGRTKMSFTELTTLISVLAE-AGITKIRL 90 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 TGG+PL+ + ++ T + ++ + + + ++ L L V + Sbjct: 91 TGGEPLLRGD--IADLVATAKNTPGIKTVSITTNGLL-----LDRHLDALLSAGIDAVNM 143 Query: 210 AIHANHPYEFSEEAI--------AAISRLAN-AGIILLSQSVLLKGINDD 250 +I + F A + RL + + L V+L+GINDD Sbjct: 144 SIDSLRADRFLAITRRNEFERTKANLDRLLSLESVPLKINVVMLRGINDD 193 >gi|225572012|ref|ZP_03780876.1| hypothetical protein RUMHYD_00306 [Blautia hydrogenotrophica DSM 10507] gi|225040545|gb|EEG50791.1| hypothetical protein RUMHYD_00306 [Blautia hydrogenotrophica DSM 10507] Length = 460 Score = 52.0 bits (124), Expect = 1e-04, Method: Composition-based stats. Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 38/162 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q V T + Sbjct: 83 LMDEYRSCSNKCIFCFIDQMPKGMRKTLYFKDD-DSRLSFLQGN----YVTLT-----NM 132 Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 S + ++L+ L I + F + +PQ Q L H Sbjct: 133 SDHDIDRILQYRLEPI----NISFQT----TNPQL----RCQLL-----------H---- 165 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 F+ +A+ + RL I + Q VL KGIND E+ +L Sbjct: 166 NRFAGKALEKVRRLYEGNIAMNGQIVLCKGINDGQELEKSLS 207 >gi|325661997|ref|ZP_08150616.1| hypothetical protein HMPREF0490_01354 [Lachnospiraceae bacterium 4_1_37FAA] gi|325471660|gb|EGC74879.1| hypothetical protein HMPREF0490_01354 [Lachnospiraceae bacterium 4_1_37FAA] Length = 448 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 68/188 (36%), Gaps = 41/188 (21%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q + T + Sbjct: 92 LMDEYRSCRNKCMFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 141 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 S + ++++ +H + NPEL + L H Sbjct: 142 SDHDIDRIVQ------------YHLEPINISFHTTNPELRCKML-----------H---- 174 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 F+ +A+ + L GI + Q VL KGIND E+ ++ P+ + Sbjct: 175 NRFAGDALKKVQTLYEGGITMNGQIVLCKGINDGEELERSIRD---MTAYLPHLQSVSVV 231 Query: 277 AAGTSHFR 284 G + FR Sbjct: 232 PVGLTKFR 239 >gi|70726341|ref|YP_253255.1| hypothetical protein SH1340 [Staphylococcus haemolyticus JCSC1435] gi|68447065|dbj|BAE04649.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 448 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + + E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NAGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I LK + K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLEEIDGLERIRISS----IEASQLTDEVIDVLKRSNK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHV 257 >gi|257439161|ref|ZP_05614916.1| PDZ domain protein [Faecalibacterium prausnitzii A2-165] gi|257198412|gb|EEU96696.1| PDZ domain protein [Faecalibacterium prausnitzii A2-165] Length = 442 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 52/167 (31%), Gaps = 48/167 (28%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156 H C +C FCF ++ + ++ D E YI Sbjct: 82 QKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 127 Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 + + +++K H+ + H+ +PQ ++ L Sbjct: 128 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 164 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 E + + RL GI + Q VL +GIND E+ L Sbjct: 165 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGINDGEELRRTLGDLL 206 >gi|78777220|ref|YP_393535.1| MiaB-like tRNA modifying enzyme [Sulfurimonas denitrificans DSM 1251] gi|78497760|gb|ABB44300.1| MiaB-like tRNA modifying enzyme [Sulfurimonas denitrificans DSM 1251] Length = 415 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 14/127 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C C +C + G + D E L I+ ++ E I TG Sbjct: 133 KSRAFIKIQEGCNFRCSYCIIPYVRGDARSM-----DEEKILEQIRRLARNGFGEFILTG 187 Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + + + ++K + I+ V+ +R S V+P +IN E + L E + Sbjct: 188 TNVGSYGQKNDSSIASLMKKISQIRGVRRIRVGS----VEPIQINDEFKEILDEPWLERH 243 Query: 209 IAIHANH 215 + I H Sbjct: 244 LHIALQH 250 >gi|323702404|ref|ZP_08114069.1| RNA modification enzyme, MiaB family [Desulfotomaculum nigrificans DSM 574] gi|323532710|gb|EGB22584.1| RNA modification enzyme, MiaB family [Desulfotomaculum nigrificans DSM 574] Length = 441 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 16/125 (12%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---- 151 R LK+ C +C +C G + + L +AA +Q+ E++ TG Sbjct: 145 RAFLKIQEGCNSFCAYCIIPYARGPVR-SRLPENVLKAATELVQQ--GYQEIVLTGIHIG 201 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 D + L +++ L + ++ LR S V+P IN LI+ + + Sbjct: 202 AYGQD-FTAQNIDLAWLVERLAAVPGLRRLRLGS----VEPHDINTALIEAVANHP-NIC 255 Query: 209 IAIHA 213 +H Sbjct: 256 RHLHI 260 >gi|297616758|ref|YP_003701917.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus lipocalidus DSM 12680] gi|297144595|gb|ADI01352.1| molybdenum cofactor biosynthesis protein A [Syntrophothermus lipocalidus DSM 12680] Length = 326 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 71/163 (43%), Gaps = 20/163 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + CR+C V +LS ++ + + + I +V TGG+PL+ Sbjct: 14 VSVTDRCNLRCRYCMPEAGVELKPHSEILSLEEIHRIIK-VGTRVGIRKVRLTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216 + L ++++ +R I + + + + PE+ LKEAG + +++ +P Sbjct: 72 -RRNLSRLVQMIRTIDLIDDVAITTNGLLF------PEMAGELKEAGLHRLNVSLDTMNP 124 Query: 217 YE---FS--EEAIAAISRLANA----GIILLSQSVLLKGINDD 250 + + A+ + A + +V+++GINDD Sbjct: 125 EKYSFITRNGSLKQALRAIETALALEFHPVKINTVVMRGINDD 167 >gi|15618388|ref|NP_224673.1| hypothetical protein CPn0477 [Chlamydophila pneumoniae CWL029] gi|4376761|gb|AAD18617.1| Hypothetical Protein CPn_0477 [Chlamydophila pneumoniae CWL029] Length = 421 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R +K+ C +C +C + G E LA I EV+ G Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPA-----EKILAEIAGVVDQGYREVVIAG 188 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 GD + L +++ + I ++ +R S +DP I +L + + + Sbjct: 189 INVGD-YCDGERSLASLIEQVDRIPGIERIRISS----IDPDDITEDLHRAITSSRHT 241 >gi|257063684|ref|YP_003143356.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] gi|256791337|gb|ACV22007.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] Length = 457 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 40/180 (22%), Positives = 62/180 (34%), Gaps = 44/180 (24%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 D + + VC C FCF R + + T +L D L+++Q T Sbjct: 93 DGAIFDGIRVCRNACMFCFMRMLPKESRDTLMLRDDDWR--LSFLQGN----FTTLT--- 143 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 LS + ++ + HV LR + C+ + I HA Sbjct: 144 --NLSEEDADEITER-----HVSPLRVS---------------LHCISPEVRSKMIGRHA 181 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN-----LMRTFVELRIKP 268 +H + +L GI L Q VLL G+ND E++ L + I P Sbjct: 182 DHGVRM-------MEKLLAGGIELYMQIVLLPGVNDGAELMKTLAWAYLHEGIANVGIVP 234 >gi|317486219|ref|ZP_07945053.1| molybdenum cofactor biosynthesis protein A [Bilophila wadsworthia 3_1_6] gi|316922518|gb|EFV43770.1| molybdenum cofactor biosynthesis protein A [Bilophila wadsworthia 3_1_6] Length = 347 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 20/162 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C +C +VL ++ E + + + +V TGG+P + Sbjct: 30 LSVTDRCNLRCTYCRSGMETFIPHESVLRYEEMEQLVD-MAMDMGVEKVRLTGGEPF--A 86 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215 K L+ LR +R + ++ P IQ LK G + + + Sbjct: 87 RKGFADFLERLRAAHPALDIRVTTNGTLIGPH------IQTLKAIGLN-AVNLSLDTFDR 139 Query: 216 -------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + + L +AGI +V L+G NDD Sbjct: 140 DKFEQITGRDLFGKVRENMDALLDAGIPFKLNAVALRGFNDD 181 >gi|295103495|emb|CBL01039.1| Fe-S oxidoreductase, related to NifB/MoaA family [Faecalibacterium prausnitzii SL3/3] Length = 445 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 52/170 (30%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156 H C +C FCF ++ + ++ D E YI Sbjct: 82 AKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 127 Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 + + +++K H+ + H+ +PQ ++ L Sbjct: 128 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 164 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 E + + RL GI + Q VL +G+ND L RT +L Sbjct: 165 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGVNDG----DELRRTLADL 205 >gi|325265090|ref|ZP_08131817.1| PDZ domain protein [Clostridium sp. D5] gi|324029780|gb|EGB91068.1| PDZ domain protein [Clostridium sp. D5] Length = 435 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 41/188 (21%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ Y ++ + F G+ + L Sbjct: 82 LMDEYRSCRNKCMFCFIDQMPAGMRDTL-----------YFKDDDS--RLSFLQGNYITL 128 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 ++ + +I+++H + NPEL + L H Sbjct: 129 TN---------MSDHDVERIVKYHLEPINISFHTTNPELRCKML-----------H---- 164 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 F+ +A+ + L GI + Q VL KG+ND E+ ++ P + Sbjct: 165 NRFAGDALKKVDILYQGGIEMNGQIVLCKGVNDGAELERSIRDL---TGYLPLLQSVSVV 221 Query: 277 AAGTSHFR 284 G + FR Sbjct: 222 PVGLTKFR 229 >gi|18978000|ref|NP_579357.1| molybdenum cofactor biosynthesis protein A [Pyrococcus furiosus DSM 3638] gi|18893779|gb|AAL81752.1| hypothetical protein PF1628 [Pyrococcus furiosus DSM 3638] Length = 419 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 75/190 (39%), Gaps = 45/190 (23%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFC---------FRREMVGSQKGTVLSSKDTEAALAYI 138 G++ R + I ++ C + C FC R ++ D A Sbjct: 108 GLIDRGTNLIQVRGSTGCNLSCIFCSVDEGPYSRTRNLDFVVDVDYLMKWFDWVAK---- 163 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 ++ + + G+PL+ + ++++ LR HV ++ S + ++ +L++ Sbjct: 164 EKGKGLEAHLDAQGEPLLYP--YIVELVQELRSHPHVSVISMQSNGVL-----LDEKLVE 216 Query: 199 CLKEAGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQ 240 L EAG V ++IH NH E +E L NAGI +L Sbjct: 217 ELAEAGLDRVNLSIHSLDPEKAKMLMGMKNYDLNHVLEMAE-------ALVNAGIDVLIA 269 Query: 241 SVLLKGINDD 250 V++ GIND+ Sbjct: 270 PVIIFGINDN 279 >gi|319957025|ref|YP_004168288.1| miab-like tRNA modifying enzyme [Nitratifractor salsuginis DSM 16511] gi|319419429|gb|ADV46539.1| MiaB-like tRNA modifying enzyme [Nitratifractor salsuginis DSM 16511] Length = 421 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 14/122 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C V + + + + E I TG + Sbjct: 135 KSRAFIKIQEGCNFRCSYCII-PFVRGNARSH-DEEQILEQVRRLAAN-GFGEFILTGTN 191 Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 R L K+LK + I+ V+ +R S ++P +I+ E ++ L E ++A Sbjct: 192 VGSYGRDRGTSLAKLLKRMSQIRGVRRIRIGS----LEPIQIDAEFMELLAEP----WMA 243 Query: 211 IH 212 H Sbjct: 244 RH 245 >gi|160942964|ref|ZP_02090202.1| hypothetical protein FAEPRAM212_00441 [Faecalibacterium prausnitzii M21/2] gi|158445658|gb|EDP22661.1| hypothetical protein FAEPRAM212_00441 [Faecalibacterium prausnitzii M21/2] Length = 447 Score = 51.6 bits (123), Expect = 2e-04, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 52/170 (30%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156 H C +C FCF ++ + ++ D E YI Sbjct: 84 AKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 129 Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 + + +++K H+ + H+ +PQ ++ L Sbjct: 130 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 166 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 E + + RL GI + Q VL +G+ND L RT +L Sbjct: 167 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGVNDG----DELRRTLADL 207 >gi|327398341|ref|YP_004339210.1| MiaB-like tRNA modifying enzyme [Hippea maritima DSM 10411] gi|327180970|gb|AEA33151.1| MiaB-like tRNA modifying enzyme [Hippea maritima DSM 10411] Length = 410 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 63/140 (45%), Gaps = 15/140 (10%) Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + PL+ I+ +Y R +K+ C +C +C + G ++ K+ + Sbjct: 107 DISDETKTYPLERILSQYRGKSRAFVKIQEGCNNHCTYCIISFLRGRERD-----KEKDK 161 Query: 134 ALAYIQ--EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 L+ I+ K+ E++ TG + I S++ L+ +L+ + ++ +R S ++P Sbjct: 162 VLSEIESLAKAGFSEIVLTGTN--IGSYRDLKGLLRDIDALEGDFRVRISS----IEPMY 215 Query: 192 INPELIQCLKEAGKPVYIAI 211 ++ E I + ++ I Sbjct: 216 VDKEFIDIVASGRFANHLHI 235 >gi|329942587|ref|ZP_08291397.1| RNA modification enzyme, MiaB family protein [Chlamydophila psittaci Cal10] gi|332287217|ref|YP_004422118.1| MiaB-like tRNA modifying enzyme [Chlamydophila psittaci 6BC] gi|313847811|emb|CBY16802.1| conserved hypothetical protein [Chlamydophila psittaci RD1] gi|325506891|gb|ADZ18529.1| MiaB-like tRNA modifying enzyme [Chlamydophila psittaci 6BC] gi|328815497|gb|EGF85485.1| RNA modification enzyme, MiaB family protein [Chlamydophila psittaci Cal10] gi|328914465|gb|AEB55298.1| MiaB-like tRNA modifying enzyme [Chlamydophila psittaci 6BC] Length = 422 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 66/192 (34%), Gaps = 39/192 (20%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R +K+ C +C +C + G + S+ + L I EV+ G Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSR-----SRPVQEILEEISGLVTQGYREVVIAG 188 Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + K L ++ + I ++ +R S +DP+ + +L L +GK Sbjct: 189 INVGDYQDQGKSLAYLISQVDEIPGIERIRISS----IDPEDVQDDLRDILL-SGKHTC- 242 Query: 210 AIHANH--PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 H++H S + ++R + G L D + L + + Sbjct: 243 --HSSHLVLQSGSNAILKRMNRKYSRGDFL-----------DCVDALRS---------VD 280 Query: 268 PYYLHHPDLAAG 279 P Y D+ G Sbjct: 281 PQYAFTTDVIVG 292 >gi|225418715|ref|ZP_03761904.1| hypothetical protein CLOSTASPAR_05939 [Clostridium asparagiforme DSM 15981] gi|225041770|gb|EEG52016.1| hypothetical protein CLOSTASPAR_05939 [Clostridium asparagiforme DSM 15981] Length = 486 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 38/189 (20%), Positives = 69/189 (36%), Gaps = 43/189 (22%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ Y ++ + F G+ + L Sbjct: 96 LMSDYRSCSNKCIFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITL 142 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 ++ + + + +I+R + Q NPEL + L H Sbjct: 143 TNMKERDI---------ERIIRMQLAPINISVQTTNPELRCKML-----------H---- 178 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHHPD 275 F+ E + + L + + + Q V KG+ND E L+RT + P+ Sbjct: 179 NRFAGETLKYMRMLYDGHVEMNGQVVCCKGVNDGAE----LVRTLDDLAGFLPFLRSVSV 234 Query: 276 LAAGTSHFR 284 + AG + +R Sbjct: 235 VPAGITKYR 243 >gi|77464115|ref|YP_353619.1| NifB family--FeMo cofactor biosynthesis protein [Rhodobacter sphaeroides 2.4.1] gi|77388533|gb|ABA79718.1| NifB family--FeMo cofactor biosynthesis protein [Rhodobacter sphaeroides 2.4.1] Length = 491 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 76/241 (31%), Gaps = 57/241 (23%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H Y R+ + + C + C +C R+ G + + LA E Q Sbjct: 58 AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117 Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174 + + G GD L +L ++++ I H Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDKVQSQLPDIKLCLSSNGLAMPDHVEEIVA--MNIDH 175 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 V L ++ P V +I P + + + A+ L G Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGKRHEGVEGAAILLARQM-----EALDMLVARG 226 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289 +++ SVL+ GIND + L R I P D A GT HF LT + Sbjct: 227 VLVKVNSVLIPGIND--AGMVELNREVKARGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280 Query: 290 G 290 G Sbjct: 281 G 281 >gi|269303354|gb|ACZ33454.1| RNA modification enzyme, MiaB family [Chlamydophila pneumoniae LPCoLN] Length = 421 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R +K+ C +C +C + G E LA I EV+ G Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPA-----EKILAEIAGVVDQGYREVVIAG 188 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 GD + L +++ + I ++ +R S +DP I +L + + + Sbjct: 189 INVGD-YCDGERSLASLIEQVDQIPGIERIRISS----IDPDDITEDLHRAITSSRHT 241 >gi|261367336|ref|ZP_05980219.1| PDZ domain protein [Subdoligranulum variabile DSM 15176] gi|282570095|gb|EFB75630.1| PDZ domain protein [Subdoligranulum variabile DSM 15176] Length = 445 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 59/165 (35%), Gaps = 39/165 (23%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 H C +C FCF ++ + + D E + LS + Sbjct: 83 KHSCANHCMFCFIDQLPPGMREPLYFKDDDERLSFLFGNYITLT----------NLSDRE 132 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANHPYEFS 220 + ++++ +I + + H+ +PQ RI + L Sbjct: 133 IDRIIE--MHISPI-FVSVHT----TNPQLRI-----RMLANKR---------------G 165 Query: 221 EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 E +A + RLA G+ L Q VL +GIND + L + + LR Sbjct: 166 GEVLAYLPRLAAGGVELNCQLVLCRGIND-GDELRRTLDDLLALR 209 >gi|15836008|ref|NP_300532.1| hypothetical protein CPj0477 [Chlamydophila pneumoniae J138] gi|16752565|ref|NP_444827.1| hypothetical protein CP0277 [Chlamydophila pneumoniae AR39] gi|33241829|ref|NP_876770.1| hypothetical protein CpB0496 [Chlamydophila pneumoniae TW-183] gi|14916790|sp|Q9Z874|Y477_CHLPN RecName: Full=Putative methylthiotransferase CPn_0477/CP_0277/CPj0477/CpB0496 gi|7189201|gb|AAF38135.1| conserved hypothetical protein [Chlamydophila pneumoniae AR39] gi|8978847|dbj|BAA98683.1| hypothetical protein [Chlamydophila pneumoniae J138] gi|33236338|gb|AAP98427.1| hypothetical protein CpB0496 [Chlamydophila pneumoniae TW-183] Length = 421 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 15/118 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R +K+ C +C +C + G E LA I EV+ G Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPA-----EKILAEIAGVVDQGYREVVIAG 188 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 GD + L +++ + I ++ +R S +DP I +L + + + Sbjct: 189 INVGD-YCDGERSLASLIEQVDQIPGIERIRISS----IDPDDITEDLHRAITSSRHT 241 >gi|213965848|ref|ZP_03394039.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III oxidase [Corynebacterium amycolatum SK46] gi|213951426|gb|EEB62817.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III oxidase [Corynebacterium amycolatum SK46] Length = 401 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/220 (21%), Positives = 84/220 (38%), Gaps = 47/220 (21%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 + P ++ ++ C + C+ C R + LS+ + + L + S+ V+ T Sbjct: 11 KKPFIVIWEVTRACGLVCKHC-RADAQHEPHPLQLSTAEGKVLLETLASYSKPKPLVVLT 69 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCLKEA 203 GGDP L+++ +RF + P V P R+ PE I+ L+EA Sbjct: 70 GGDPF--ERDDLEEL------------VRFGTEHGLNMSLSPSVTP-RLTPERIKSLREA 114 Query: 204 -GKPVYI----AIHANHP--YEFSEEAIAAISR---LANAGIILLSQSVLLKGINDDPEI 253 GK + + A H FS + + AG L S L KG + Sbjct: 115 GGKAMSMSLDGATAQTHDKFRGFSGTFEKTLKMAPHINEAGYRLQINSTLTKG---NIHE 171 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 L++T +E++ K +Y+ F + G + Sbjct: 172 APALLKTVMEMQAKMWYVF----------FLVPTGRGADL 201 >gi|315651882|ref|ZP_07904885.1| PDZ domain protein [Eubacterium saburreum DSM 3986] gi|315485884|gb|EFU76263.1| PDZ domain protein [Eubacterium saburreum DSM 3986] Length = 456 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 38/207 (18%), Positives = 73/207 (35%), Gaps = 50/207 (24%) Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P EE + E D IG +G++ Y C C FCF +M Sbjct: 56 PNGEEWELDIESDYDDIGLEFD---EGLMSDYK---------SCTNNCIFCFIDQMPQGM 103 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRF 180 + T+ D ++ L+++Q V T + + + ++++ L I + Sbjct: 104 RETLYFKDD-DSRLSFLQGN----YVTLT-----NMKDEDIDRIIRFNLAPI----NISV 149 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 H+ +P+ L++ +H F+ E++ I +L + + Q Sbjct: 150 HT----TNPE---------LRKK------MLH----NRFAGESLKYIDKLYEKNVPMNGQ 186 Query: 241 SVLLKGINDDPEILANLMRTFVELRIK 267 V+ G ND E+ L + Sbjct: 187 VVMCPGYNDGEELRRTLNDLLKYAPVM 213 >gi|288940317|ref|YP_003442557.1| molybdenum cofactor biosynthesis protein A [Allochromatium vinosum DSM 180] gi|288895689|gb|ADC61525.1| molybdenum cofactor biosynthesis protein A [Allochromatium vinosum DSM 180] Length = 328 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 66/162 (40%), Gaps = 19/162 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C + G ++ LS ++ E +A + V TGG+PL+ Sbjct: 19 LSVTDRCDLRCGYCLPKGFKGFEEPAHWLSFEEIERVVAAFTA-LGVRRVRLTGGEPLM- 76 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 + L ++ L + + L S L L AG + + +++ + +P Sbjct: 77 -RRGLTELAARLSALPGLDDLSLSSNA------TQLESLAGPLARAGVRRLNVSLDSLNP 129 Query: 217 ---YEFS----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 + + E I+ AG+ + +V+++G+ND Sbjct: 130 EVFRQITGGDLERVRRGIAAAREAGMEPIRVNTVVMRGVNDT 171 >gi|295100401|emb|CBK97946.1| Fe-S oxidoreductase, related to NifB/MoaA family [Faecalibacterium prausnitzii L2-6] Length = 443 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 54/170 (31%), Gaps = 52/170 (30%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTGGDPLI 156 H C +C FCF ++ + ++ D E YI Sbjct: 82 QKHSCSNHCMFCFIDQLPPGMRESLYFKDDDERLSFLFGNYITMT--------------N 127 Query: 157 LSHKRLQKVLKTLRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 + + +++K H+ + H+ +PQ ++ L Sbjct: 128 MQDHEIDRIIKM-----HISPINISVHT----TNPQL----RVRMLANKR---------- 164 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 E + + RL GI + Q VL +GIND L RT +L Sbjct: 165 -----GGEVLKYLPRLVEGGIAVNCQLVLCRGINDG----DELRRTLTDL 205 >gi|126462958|ref|YP_001044072.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter sphaeroides ATCC 17029] gi|126104622|gb|ABN77300.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter sphaeroides ATCC 17029] Length = 491 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 76/241 (31%), Gaps = 57/241 (23%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H Y R+ + + C + C +C R+ G + + LA E Q Sbjct: 58 AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117 Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174 + + G GD L +L ++++ I H Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDKVQSQLPDIKLCLSSNGLAMPDHVEEIVA--MNIDH 175 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 V L ++ P V +I P + + + A+ L G Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGKRHEGVEGAAILLARQM-----EALDMLVARG 226 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289 +++ SVL+ GIND + L R I P D A GT HF LT + Sbjct: 227 VLVKVNSVLIPGIND--AGMVELNREVKARGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280 Query: 290 G 290 G Sbjct: 281 G 281 >gi|315302537|ref|ZP_07873372.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL F6-596] gi|313629099|gb|EFR97397.1| molybdenum cofactor biosynthesis protein A [Listeria ivanovii FSL F6-596] Length = 333 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 42/174 (24%), Positives = 70/174 (40%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + I K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVGFME-IMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + AG + VL+KG NDD Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEAGLFPIKLNVVLIKGQNDD 170 >gi|332558991|ref|ZP_08413313.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter sphaeroides WS8N] gi|332276703|gb|EGJ22018.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter sphaeroides WS8N] Length = 491 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 76/241 (31%), Gaps = 57/241 (23%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H Y R+ + + C + C +C R+ G + + LA E Q Sbjct: 58 AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117 Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174 + + G GD L +L ++++ I H Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDKVQSQLPDIKLCLSSNGLAMPDHVEEIVA--MNIDH 175 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 V L ++ P V +I P + + + A+ L G Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGKRHEGVEGAAILLARQM-----EALDMLVARG 226 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289 +++ SVL+ GIND + L R I P D A GT HF LT + Sbjct: 227 VLVKVNSVLIPGIND--AGMVELNREVKARGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280 Query: 290 G 290 G Sbjct: 281 G 281 >gi|163813999|ref|ZP_02205392.1| hypothetical protein COPEUT_00151 [Coprococcus eutactus ATCC 27759] gi|158450693|gb|EDP27688.1| hypothetical protein COPEUT_00151 [Coprococcus eutactus ATCC 27759] Length = 442 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 58/162 (35%), Gaps = 38/162 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF + + T+ D ++ L+++Q + T + Sbjct: 80 LMDNYKSCYNKCIFCFIDQNPKGMRDTIYFKDD-DSRLSFLQGN----YITLT-----NM 129 Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + + +++ L I + H+ +PQ L Sbjct: 130 KDEDIDRIINYHLAPI----NISVHT----TNPQL----RCSMLN--------------- 162 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 F+ + I + NAGI + Q VL KGIND E+ ++ Sbjct: 163 NRFAGTILERIRKFYNAGIPMNGQIVLCKGINDGEELWRSIS 204 >gi|154687786|ref|YP_001422947.1| molybdenum cofactor biosynthesis protein A [Bacillus amyloliquefaciens FZB42] gi|166217238|sp|A7Z9P0|MOAA_BACA2 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|154353637|gb|ABS75716.1| MoaA [Bacillus amyloliquefaciens FZB42] Length = 341 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 25/166 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C E+ G K +LS ++ E + + ++ TGG+ Sbjct: 21 ISVTDRCNFRCTYCMPAELFGPDYPFLQKTELLSFEELERLAKLFVGRFGVEKIRLTGGE 80 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIV---DPQ----RINPELIQCLKEA 203 PL+ + +++K L I ++ + S +P+ Q R+ L E Sbjct: 81 PLMRKD--MPELIKKLARIPGLKDIAMTTNGSLLPVYAEKLKQAGLHRVTVSLDSLEDER 138 Query: 204 GKPVY-IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 K + + N + + I AG+ + V+ KG+N Sbjct: 139 FKAINGRGVSVN-------KVLEGIEAAKAAGLGVKINMVVQKGVN 177 >gi|153816158|ref|ZP_01968826.1| hypothetical protein RUMTOR_02406 [Ruminococcus torques ATCC 27756] gi|317500478|ref|ZP_07958702.1| PDZ domain-containing protein [Lachnospiraceae bacterium 8_1_57FAA] gi|331089421|ref|ZP_08338320.1| hypothetical protein HMPREF1025_01903 [Lachnospiraceae bacterium 3_1_46FAA] gi|145846493|gb|EDK23411.1| hypothetical protein RUMTOR_02406 [Ruminococcus torques ATCC 27756] gi|316898233|gb|EFV20280.1| PDZ domain-containing protein [Lachnospiraceae bacterium 8_1_57FAA] gi|330404789|gb|EGG84327.1| hypothetical protein HMPREF1025_01903 [Lachnospiraceae bacterium 3_1_46FAA] Length = 452 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 40/188 (21%), Positives = 69/188 (36%), Gaps = 41/188 (21%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q V T + Sbjct: 85 LMDEYRSCRNKCMFCFIDQMPEGMRDTLYFKDD-DSRLSFLQGN----YVTLT-----NM 134 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 S ++ +I+R+ + Q NP+L + L H Sbjct: 135 SDHDIE------------RIIRYRLEPINISFQTTNPQLRCKML-----------H---- 167 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 F+ +A+ + RL GI + Q VL KG ND E+ ++ + P + Sbjct: 168 NRFAGDALKKVDRLFEGGIEMNGQIVLCKGENDGAELERSI-KDLTA--YIPLLRSVSVV 224 Query: 277 AAGTSHFR 284 G + FR Sbjct: 225 PVGLTKFR 232 >gi|242280341|ref|YP_002992470.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio salexigens DSM 2638] gi|259495863|sp|C6C060|MOAA_DESAD RecName: Full=Molybdenum cofactor biosynthesis protein A gi|242123235|gb|ACS80931.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio salexigens DSM 2638] Length = 330 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 40/253 (15%), Positives = 88/253 (34%), Gaps = 43/253 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C +C ++ +L ++ + + I ++ TGG+P Sbjct: 16 LSVTDRCNLRCMYCVTKDFKHIPHPDILRYEEMLRLVD-LAASMNISKLRLTGGEPF-AR 73 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI----HAN 214 + + + + + LR + +++P + PEL + + + + + Sbjct: 74 KGFMDFISQVMDSHPEID-LRITTNGTLIEP--LVPEL-KKIGVSRLNISLDTLDRETF- 128 Query: 215 HPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDP-----EILANLMRTFVEL 264 E + + +A IS +AGI + +V +KGIND + + Sbjct: 129 --KEVTGRDHLTDVLATISACLSAGIRVKVNAVAMKGINDRELNSFIDFARENPIDMRFI 186 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ--------PFYILDLPGG 316 P D S F I+ +E ++ + P + + GG Sbjct: 187 EFMP----MGDDTKSDSRFW----SADDILEQGREYVNLIPVKRTAENRGPARMYSIEGG 238 Query: 317 YGKV----KIDTH 325 G++ + +H Sbjct: 239 KGRLGLISPVSSH 251 >gi|229917634|ref|YP_002886280.1| molybdenum cofactor biosynthesis protein A [Exiguobacterium sp. AT1b] gi|229469063|gb|ACQ70835.1| molybdenum cofactor biosynthesis protein A [Exiguobacterium sp. AT1b] Length = 335 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 9/85 (10%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C CR+C FR ++ +LS + E + I + +V TGG+ Sbjct: 17 ISVIDKCNFRCRYCMPEEAFRHHQF-LKRDELLSFDEIERFVRIIAPH-GVKKVRLTGGE 74 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ LR + ++ + Sbjct: 75 PLLRPN--LDELIRRLRAVTTIETI 97 >gi|256395785|ref|YP_003117349.1| hopanoid biosynthesis associated radical SAM protein HpnH [Catenulispora acidiphila DSM 44928] gi|256362011|gb|ACU75508.1| hopanoid biosynthesis associated radical SAM protein HpnH [Catenulispora acidiphila DSM 44928] Length = 334 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 87/222 (39%), Gaps = 36/222 (16%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 ++P + L+ L C + C C + + + E ALA ++E V G Sbjct: 25 KFPLLVELEPLFACNLACAGCGKIQHP---ADVLKKRMPVEQALAAMRECGAPM-VSIAG 80 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+PL+ ++ +++ L +K + + + ++ P+ + K + ++ Sbjct: 81 GEPLMHP--QIGELVDELVKMK--RYVFLCTNALLI------PKKLDRFKPSRYFTWVV- 129 Query: 212 HANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDDP----EILANL 257 H + E +EA+AA+ L G + + + + D P +IL L Sbjct: 130 HLDGLRERHDESVCKEGVFDEAVAAVRELRRRGFRVTTNTTIFDT--DSPQDVIDILDYL 187 Query: 258 MRTFV--ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 ++ I P Y + + A HF L +++ +++ Sbjct: 188 NDDLRVDQMMISPGYAY--EKAPDQQHF-LPVKQTRELFHKA 226 >gi|226355448|ref|YP_002785188.1| molybdenum cofactor biosynthesis protein A [Deinococcus deserti VCD115] gi|226317438|gb|ACO45434.1| putative molybdenum cofactor biosynthesis protein A [Deinococcus deserti VCD115] Length = 337 Score = 51.3 bits (122), Expect = 2e-04, Method: Composition-based stats. Identities = 34/183 (18%), Positives = 66/183 (36%), Gaps = 34/183 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C + C +C + G + +LS ++ E + ++ TGG+ Sbjct: 19 ISVTDRCNLRCTYCMPASVFGPDYAFVPRSELLSFEEIERLTRLFLI-LGVRKLRLTGGE 77 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 P + L ++ L ++ V+ L + + P L + LK AG Sbjct: 78 PTLRRD--LSDLIARLARLEGVEDLAMTTNGL------LLPRLARELKSAGLRRVTVSLD 129 Query: 212 --------HAN----HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 N HP + + AA+ AG+ + +V+ +G+ND + L L Sbjct: 130 SLDPDVFGQMNGLGVHPQQVLDGIEAALQ----AGLGVKINTVVQRGVND--QGLRELWL 183 Query: 260 TFV 262 Sbjct: 184 ALR 186 >gi|268609957|ref|ZP_06143684.1| MiaB-like tRNA modifying enzyme YliG [Ruminococcus flavefaciens FD-1] Length = 443 Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 13/125 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-PLIL 157 LK+ C C +C + G K + +D ++ E + E++ D L Sbjct: 149 LKVAEGCSNCCTYCAIPLIRG--KFRSVPMEDVLKEARFLAEN-GVTELVVIAQDTALYG 205 Query: 158 SH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIH 212 +L ++L L I ++ +R P+RI EL+ + K V Y+ I Sbjct: 206 KDLYGEPKLAELLTELCRIDGLKWIR----TLYCYPERITDELLDVIAREDKIVKYMEIP 261 Query: 213 ANHPY 217 H Sbjct: 262 IQHCN 266 >gi|146303295|ref|YP_001190611.1| radical SAM domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701545|gb|ABP94687.1| Radical SAM domain protein [Metallosphaera sedula DSM 5348] Length = 347 Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 41/283 (14%), Positives = 99/283 (34%), Gaps = 47/283 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++L+ C + C+ C + + G L++++ ++ + + S + + +GGD Sbjct: 4 PYVVVLESTKACDLACKHCRAKAIPNRLPGE-LTTEEVKSLVDDLAS-SGVKLFVISGGD 61 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 L + ++L+ +I + RIN E+ + +K+ G + ++I Sbjct: 62 AL--KRDDIFEILEY----SSAKI----TTALSPSGSRINVEVAKRIKDTGVSM-VSISV 110 Query: 214 NHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 + P E +E A A+ L + + S + + D + L + Sbjct: 111 DGPEEIHDEFRGVRGAFKMAKQAVDSLHEVKLPVQINSTISRYNVDHLQELRKTVEAL-- 168 Query: 264 LRIKPYY--LHHPDLA-AGTSHFRLTIEEGQKIVASL-KEKISGLCQ-----PFYILDLP 314 +P Y + T +T E+ ++++ ++ K ++ GL P+ + + Sbjct: 169 ---RPVYWDVFMLIPTGRATKEMMITSEQAEEVMRTITKWRMEGLNVRMTCAPYLVRVMN 225 Query: 315 GGYGKVKIDTHNIKKV----------GNGSYCITDHHNIVHDY 347 + Y + V+ Sbjct: 226 EMGVVRPLPPDKNYGRRSVNGARGCMAGNGYAFVAYDGTVYPC 268 >gi|115372589|ref|ZP_01459896.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1] gi|310823867|ref|YP_003956225.1| radical sam domain-containing protein [Stigmatella aurantiaca DW4/3-1] gi|115370310|gb|EAU69238.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1] gi|309396939|gb|ADO74398.1| Radical SAM domain protein [Stigmatella aurantiaca DW4/3-1] Length = 290 Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 12/139 (8%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + ++ C C +C ++ M G T + EAAL + WE +GG+P Sbjct: 7 TVSWNIVGGCNYRCTYCVQKHMPGIGGPT---DEQLEAALTTLTALPGSWEFKISGGEPF 63 Query: 156 ILSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 +L KRL +V K L H V +L + P R+ I+ E + ++H Sbjct: 64 LL--KRLPEVAKRLATAGHKVSLL-----TNLSAPLRVLATFIEAAGEQLRTFSCSLHRE 116 Query: 215 HPYEFSE-EAIAAISRLAN 232 E + E A+ L Sbjct: 117 EVEEAAFLEKAQAVQALLA 135 >gi|160895345|ref|ZP_02076116.1| hypothetical protein CLOL250_02904 [Clostridium sp. L2-50] gi|156863038|gb|EDO56469.1| hypothetical protein CLOL250_02904 [Clostridium sp. L2-50] Length = 439 Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 26/155 (16%), Positives = 57/155 (36%), Gaps = 25/155 (16%) Query: 69 ILPEEREDPIGDNNHSPLK---GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 + E D + + PL + H R +K+ C +C +C + Sbjct: 120 VTDEGMLDISAEKEYEPLTINSTLEH---TRAYVKIQDGCNQFCSYC-----IIPYVRGR 171 Query: 126 LSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQIL 178 + S+D + + ++ + + E++ TG + L V+ + I+ ++ + Sbjct: 172 IRSRDIASIIEEVERLALTGVKEIVLTGIHISSYGKDKENEVGLADVIDAISKIESIKRI 231 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 R S ++P I E I + + K + H Sbjct: 232 RLGS----LEPSIITDEFIDRIVDNEK---VCPHF 259 >gi|289671287|ref|ZP_06492362.1| hypothetical protein XcampmN_23115 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 78 Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 9/69 (13%), Positives = 24/69 (34%) Query: 8 LTSAQDLYNANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEEL 67 + + L + + + + + + + + +DP+ RQ +P E+ Sbjct: 1 MRDPRVLLEQLGLDAQAAAISDAAAAQFPLRVPRAFVARMRHGDLHDPLLRQVLPLDAEM 60 Query: 68 NILPEERED 76 +P D Sbjct: 61 QPVPGFGLD 69 >gi|110596760|ref|ZP_01385050.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium ferrooxidans DSM 13031] gi|110341447|gb|EAT59907.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium ferrooxidans DSM 13031] Length = 424 Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 79/218 (36%), Gaps = 50/218 (22%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE----KSQI 144 H++ RI L + C + C +C R+ ++ ++SK + A+ Y+ + I Sbjct: 17 HKF-GRIHLPIAPKCNIQCNYCNRKFDCMNENRPGVTSKILSPQQAMHYLDQAMILSPNI 75 Query: 145 WEVIFTG-GDPLILSHKRLQK------------------------VLKTLRY--IKHVQI 177 V G GDP ++ ++ + L + HV Sbjct: 76 AVVGIAGPGDPFANPNETMETLRLVRAKYPEMLLCVATNGLDLLPYIDELAELQVSHV-T 134 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 + + +DP+ I E+ ++ K +Y + + A+ RL AG+ Sbjct: 135 ITIN----AIDPE-IGSEIYAWVR-YNKKMYRD--IDAARVLIGNQLEALKRLKEAGVTA 186 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELR-----IKPYY 270 S+++ GIND I R EL PYY Sbjct: 187 KVNSIIIPGINDTHVIEVA--RKVAELGADILNCMPYY 222 >gi|221639981|ref|YP_002526243.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter sphaeroides KD131] gi|221160762|gb|ACM01742.1| Nitrogenase cofactor biosynthesis protein NifB [Rhodobacter sphaeroides KD131] Length = 491 Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 48/241 (19%), Positives = 76/241 (31%), Gaps = 57/241 (23%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H Y R+ + + C + C +C R+ G + + LA E Q Sbjct: 58 AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117 Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174 + + G GD L +L ++++ I H Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDRVQSQLPDIKLCLSSNGLAMPDHVEEIVA--MNIDH 175 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 V L ++ P V +I P + + + A+ L G Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGKRHEGVEGAAILLARQM-----EALDMLVARG 226 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289 +++ SVL+ GIND + L R I P D A GT HF LT + Sbjct: 227 VLVKVNSVLIPGIND--AGMVELNREVKARGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280 Query: 290 G 290 G Sbjct: 281 G 281 >gi|134300331|ref|YP_001113827.1| RNA modification protein [Desulfotomaculum reducens MI-1] gi|134053031|gb|ABO51002.1| RNA modification enzyme, MiaB family [Desulfotomaculum reducens MI-1] Length = 436 Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 18/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCF--------RREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 R LK+ C +C +C R + + + + + I Sbjct: 143 KTRAFLKIQEGCNSFCAYCIIPYARGPVRSRLP--ENVLSSAEELIQQGFQEIVLTG--I 198 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + G D L +++ L + + LR S V+P IN LI+ + E Sbjct: 199 HIGAYGQD-FTGKDIDLGWLVERLAKLPGLTRLRLGS----VEPHDINNALIKAVSEHP- 252 Query: 206 PVYIAIHA 213 V +H Sbjct: 253 NVCRHLHI 260 >gi|308176262|ref|YP_003915668.1| molybdenum cofactor biosynthesis protein A [Arthrobacter arilaitensis Re117] gi|307743725|emb|CBT74697.1| molybdenum cofactor biosynthesis protein A [Arthrobacter arilaitensis Re117] Length = 346 Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 69/172 (40%), Gaps = 29/172 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G ++ +LS ++ E LA I + ++ TGG+ Sbjct: 22 ISVTDRCNFRCVYCMPKEIFGRDFQFRERSELLSFEEIER-LARISVSLGVTKLRLTGGE 80 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF-------HSRVPIVDPQ-------RINPELIQC 199 PL+ + + ++ L ++ + R S +P++ P R+ L Sbjct: 81 PLL--RRGIVDLVAMLSNLRTPEGKRIDLAMTTNGSALPVLAPALKEAGLNRVTISLDSL 138 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E K + N P + + AI G+ + +V+ +G+ND Sbjct: 139 DDEKFKAINDV---NFPVS---KVLEAIQVAREVGLGPVKINTVIKRGVNDS 184 >gi|325108721|ref|YP_004269789.1| 23S rRNA m(2)A-2503 methyltransferase [Planctomyces brasiliensis DSM 5305] gi|324968989|gb|ADY59767.1| 23S rRNA m(2)A-2503 methyltransferase [Planctomyces brasiliensis DSM 5305] Length = 358 Score = 50.9 bits (121), Expect = 3e-04, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 71/207 (34%), Gaps = 49/207 (23%) Query: 86 LKGIVHRYPDRILLKLLHV--CPVYCRFC-------FRREMVGSQKGTVLSSKDTEAALA 136 ++ ++ R PDR + + C + C FC R V + Sbjct: 94 VECVLMREPDRNTICISTQVGCGMGCVFCASGLAGLTRNLQTAEILEQVARLDRLQ---- 149 Query: 137 YIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVD 188 + ++ V+ G G+PL L+++L L ++H V+ + + + Sbjct: 150 --SDDEKLTNVVVMGMGEPL----ANLKQLLPALERMQHALGLNLGVRRITVST---VGL 200 Query: 189 PQRINPELIQCLKEAGKP--VYIAIH------------ANHPYEFSEEAIAAISRLANAG 234 P RI + L GKP + +++H N AA G Sbjct: 201 PDRI-----RQLAAHGKPYNLAVSLHAPNDKLRDEIVPVNDKIGLDAVLSAADEYFETTG 255 Query: 235 IILLSQSVLLKGINDDPEILANLMRTF 261 + + VLLKGIND E L Sbjct: 256 RRVTYEYVLLKGINDSLEHAHELAEVL 282 >gi|223985672|ref|ZP_03635720.1| hypothetical protein HOLDEFILI_03026 [Holdemania filiformis DSM 12042] gi|223962363|gb|EEF66827.1| hypothetical protein HOLDEFILI_03026 [Holdemania filiformis DSM 12042] Length = 439 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 49/135 (36%), Gaps = 8/135 (5%) Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 + PL H R LK+ C +C +C G ++ L + + A Sbjct: 136 AEFEMLPLDEFEH--QTRAYLKVQDGCNQFCAYCIIPYARGRERSLPL-DEALKEARRLA 192 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 Q+ +I G L +++ + I+ ++ +R S + I + I EL+ Sbjct: 193 QKHKEIVLAGIHTGRYGKDRDTSLCDLIRGMCEIEPLERIRI-SSIEITE---ITDELL- 247 Query: 199 CLKEAGKPVYIAIHA 213 L E + +H Sbjct: 248 TLMETQPKIARHLHI 262 >gi|294782589|ref|ZP_06747915.1| Fe-S oxidoreductase [Fusobacterium sp. 1_1_41FAA] gi|294481230|gb|EFG29005.1| Fe-S oxidoreductase [Fusobacterium sp. 1_1_41FAA] Length = 439 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 26/141 (18%), Positives = 50/141 (35%), Gaps = 17/141 (12%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R +K+ C +C +C K ++ + + E EVI G D Sbjct: 146 TRAYVKIQDGCNHFCSYCKIP--FARGKSRSRKKENILKEIEKLVED-GFKEVILIGID- 201 Query: 155 LIL------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 L + +L+ + IK ++ +R S V P +I+ + I K K + Sbjct: 202 LSAYGEDFEKKDSFESLLEDILKIKDLKRVRIGS----VYPDKISDKFIDLFK--NKNLM 255 Query: 209 IAIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 256 PHLHIS-LQSCDDTVLKNMRR 275 >gi|147678958|ref|YP_001213173.1| molybdenum cofactor biosynthesis enzyme [Pelotomaculum thermopropionicum SI] gi|189028691|sp|A5CYZ0|MOAA_PELTS RecName: Full=Molybdenum cofactor biosynthesis protein A gi|146275055|dbj|BAF60804.1| molybdenum cofactor biosynthesis enzyme [Pelotomaculum thermopropionicum SI] Length = 325 Score = 50.5 bits (120), Expect = 3e-04, Method: Composition-based stats. Identities = 49/259 (18%), Positives = 99/259 (38%), Gaps = 47/259 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E V S G +L ++ E + + + ++ TGG+PL+ Sbjct: 14 ISVTDRCNLRCVYCMPEEGVRSLPHGEILRLEEIETVVRA-AALTGVKKIRLTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 K L+++++ + I + + + + P R + LKEAG K V +++ Sbjct: 72 -RKGLEELVRRVSGIPGIDDIALTTNGLL-LPSR-----AKALKEAGVKRVNVSLDTLRA 124 Query: 217 Y---EFS-----EEAIAAISRLANAGI-ILLSQSVLLKGIN-DDPEILANLMRTFVELRI 266 E + A I +AG+ + +V+++G N D+ +A L Sbjct: 125 DRYAEITRGGNLAGAWEGIQSALDAGLHPVKLNTVIIRGFNEDEVVAMAMLTIN------ 178 Query: 267 KPYYLHH----PDLAAGTSHFR----LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYG 318 +P LH +S + + +++ ++ K+ G P GG Sbjct: 179 RP--LHVRFIELMPIGSSSSWAAGRYVP---AAEVMDAISAKL-GPLVPARQP-AGGGPA 231 Query: 319 KVKIDTHNIKKVGNGSYCI 337 K + K G+ Sbjct: 232 K-----YYRLKDAAGTVGF 245 >gi|197302998|ref|ZP_03168046.1| hypothetical protein RUMLAC_01724 [Ruminococcus lactaris ATCC 29176] gi|197297853|gb|EDY32405.1| hypothetical protein RUMLAC_01724 [Ruminococcus lactaris ATCC 29176] Length = 456 Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 39/172 (22%), Positives = 65/172 (37%), Gaps = 41/172 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ H C C FCF +M + T+ D ++ L+++Q + T + Sbjct: 83 LMDEYHSCHNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 132 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 S K ++ +I+R+ + Q NPEL + L H Sbjct: 133 SDKDVE------------RIVRYRLEPINISFQTTNPELRCKML-----------H---- 165 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 F+ EA+ + L GI + Q VL KG+ND E+ ++ P Sbjct: 166 NRFAGEALKKVDILYQGGIEMNGQIVLCKGVNDGEELERSIRDL---TGYLP 214 >gi|114566232|ref|YP_753386.1| radical SAM protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337167|gb|ABI68015.1| radical SAM domain protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 333 Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 36/215 (16%), Positives = 77/215 (35%), Gaps = 39/215 (18%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C ++C C+R G++ LS++ + + I++ + +IF+GG+PL+ Sbjct: 3 VSWNTTNQCNMFCDHCYRDA--GARLEDELSTEQAKKLIEEIKK-AGFRIMIFSGGEPLM 59 Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVY------ 208 L + R RV + + I+PE+ Q LK+AG Sbjct: 60 RPDIFELGQYAT-----------RQGLRVVMGTNGSLISPEVAQKLKKAGFMAAGVSLDS 108 Query: 209 IAIHANHP-YEFSEEA---IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 + N+ + + L +AG+ + ++ + + L + +E+ Sbjct: 109 LNPAKNNAFRKLDNAFQLTCEGMQNLKDAGLPFQVHTTVMDW---NVDELEAICDFAIEI 165 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 Y++ F + G I Sbjct: 166 GAMAYHVF----------FLVPTGRGADIEEEALR 190 >gi|116749858|ref|YP_846545.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116698922|gb|ABK18110.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB] Length = 347 Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 75/206 (36%), Gaps = 37/206 (17%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFT 150 +P + +L C + CR C S + + ALA + + EV+FT Sbjct: 8 FPVLVGWELTLACNLRCRHC-----ASSAGEARSNELTLDEALAICDQLPPLLVLEVVFT 62 Query: 151 GGDPLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GG+PL+ + + + LR + HV ++ + I E+++ L+ AG + Sbjct: 63 GGEPLLSP--HWEAIARRLRELGIHVGVVTNGT--------LITDEMLERLRGAGIT-AM 111 Query: 210 AIHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLM 258 A+ + E + + I R AG + +V+ +N L+ ++ Sbjct: 112 AVSMDGLSETHDFIRGVPGLHDRVMRGIERSLKAGFQI---TVIT-TVNALTVRELSGML 167 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFR 284 + +K G R Sbjct: 168 ELLQGIGVK---RWQLQPVFGFGRMR 190 >gi|227872687|ref|ZP_03991017.1| possible 2-methylthioadenine synthetase [Oribacterium sinus F0268] gi|227841501|gb|EEJ51801.1| possible 2-methylthioadenine synthetase [Oribacterium sinus F0268] Length = 423 Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 18/157 (11%) Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113 D I ++ +P+ +E+ + + + RY LK+ C YC +C Sbjct: 89 DEIRKE-LPEIDEITSVKDYVKRLDHQMARVESGEKYSRY-----LKIAEGCDKYCSYCI 142 Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVIFTGGDPLILSHKRLQKVLKT 168 + G + ++ E A A + E + E G D + K L ++L Sbjct: 143 IPRLRGHYR-SIPKELVLEEARALVSEGAGELILVAQETTLYGTD--LYKKKALAELLAE 199 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L I ++Q +R P+ I PELI+ +K K Sbjct: 200 LSEIPNLQWIRI----LYCYPEEIEPELIREMKRNPK 232 >gi|228476133|ref|ZP_04060841.1| conserved hypothetical protein [Staphylococcus hominis SK119] gi|314936303|ref|ZP_07843650.1| Fe-S oxidoreductase [Staphylococcus hominis subsp. hominis C80] gi|228269956|gb|EEK11436.1| conserved hypothetical protein [Staphylococcus hominis SK119] gi|313654922|gb|EFS18667.1| Fe-S oxidoreductase [Staphylococcus hominis subsp. hominis C80] Length = 448 Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A +Q E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLVQS--GYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L I ++ +R S ++ ++ E+I LK + K Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLEEIDGLERIRISS----IEASQLTDEVIDVLKNSNK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHV 257 >gi|224477241|ref|YP_002634847.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus carnosus subsp. carnosus TM300] gi|7674139|sp|Q9ZIM6|MOAA_STACT RecName: Full=Molybdenum cofactor biosynthesis protein A gi|3955209|gb|AAC83144.1| MoaA [Staphylococcus carnosus] gi|222421848|emb|CAL28662.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus carnosus subsp. carnosus TM300] Length = 340 Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 38/174 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 L + C C +C +E+ G K +LS + E +A + + ++ TGG+ Sbjct: 18 LSVTDRCNFRCDYCMPKEIFGDDFVFLPKDELLSFSEMER-IARVYTHLGVKKIRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPEL 196 PL+ L K++ L I+ V+ + R V I+ EL Sbjct: 77 PLMRRD--LYKLIAALNEIEGVEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDNEL 134 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 Q + ++ + I + G + V+ KG+NDD Sbjct: 135 FQSINNRNIK-------------ADTILEQIDYAVSIGFKVKINVVVQKGVNDD 175 >gi|126458652|ref|YP_001054930.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM 11548] gi|126248373|gb|ABO07464.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum calidifontis JCM 11548] Length = 309 Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 43/220 (19%), Positives = 92/220 (41%), Gaps = 39/220 (17%) Query: 101 LLHVCPVYCRFCFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + C C FC G Q +G+ L+++D E A +Y+ K +++ TGG+PL+ Sbjct: 17 VDDECNYNCLFC---HFEGQQRRQGSTLTAEDYEFA-SYVFSKLGVYDFKLTGGEPLLRR 72 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPY 217 + K+++ + + V I + + L +AG + + ++IH P Sbjct: 73 D--IDKIVEAIARVAAVSITTNGL---------LLRRWVDRLYKAGLRKINVSIHTADPE 121 Query: 218 EF-------SEEAIAAISRL---ANAGIILLSQSVLLKGINDDPEILANLMR--TFVELR 265 ++ + + L N G+ + +V+L+GIN D + + L++ ++ Sbjct: 122 KYSKVVGAPTWAFKEVLRGLQESRNRGLAIKLNAVVLRGINTDDKSVKELVKLAASLDAS 181 Query: 266 IKPYYLHHPDLAAGT-----SHFRLTIEEGQKIVASLKEK 300 ++ + +G+ + IE +IV L + Sbjct: 182 LQ----FIELMPSGSGLKVFGDYYEPIETIAEIVTRLGGR 217 >gi|148270762|ref|YP_001245222.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1] gi|147736306|gb|ABQ47646.1| Radical SAM domain protein [Thermotoga petrophila RKU-1] Length = 317 Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 80/218 (36%), Gaps = 26/218 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI- 156 + C C FC + + G K V S D + S +E+ F GG Sbjct: 6 VFLPYAGCKRRCVFCDQIKATGQTK--VPSLDDIARIIEEYSRTSNEYELGFYGG-TFTG 62 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 LS +++++ L+ ++ V+ +R +R P IN ++ LK+ G V + Sbjct: 63 LSEEQMEEYLRFVKGFPVVKSIRVSTR-----PDEINERKLKILKKYGVNVIEVGVQSFL 117 Query: 217 YEF---------SEEAIAAISRLANAGIILLSQ-SVLLKGINDDPEILANLMRTFVEL-- 264 E S+EA A + G +L V L G + EIL+ L Sbjct: 118 DEVLEKSKRGYTSKEAERACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECGADM 177 Query: 265 -RIKPYYLH----HPDLAAGTSHFRLTIEEGQKIVASL 297 RI P + + + L +EE I + L Sbjct: 178 VRIHPTLVFEGTELHRMMKEKGYTPLDVEEAVDICSDL 215 >gi|326204997|ref|ZP_08194848.1| protein of unknown function DUF512 [Clostridium papyrosolvens DSM 2782] gi|325984863|gb|EGD45708.1| protein of unknown function DUF512 [Clostridium papyrosolvens DSM 2782] Length = 438 Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 43/238 (18%), Positives = 72/238 (30%), Gaps = 88/238 (36%) Query: 41 PVIAN----LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 + L+ P+ I E+ + +E ED D S + G Sbjct: 42 RYYQSSEELLLEIEKPDGEIW--------EIEVEKDETEDLGLDFEDSLIDG-------- 85 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 C C FCF ++ + TV D Sbjct: 86 -----AKSCTNKCIFCFIDQLPKGMRETVYFKDD-------------------------- 114 Query: 157 LSHKRLQKVLK---TLRYIKHVQILR-FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 RL + TL IK+ ++ R H R+ P+ +++H Sbjct: 115 --DSRLSFLTGNYVTLTNIKNEELERIIHYRM--------------------SPINVSVH 152 Query: 213 ANHP--------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE---ILANLMR 259 +P F+ + + I L + GI + Q VL + IND E + +L + Sbjct: 153 TTNPDLRKFMLGNRFAGDVMDKIRMLTDNGIEVNCQIVLCRDINDKDELDKTIEDLCQ 210 >gi|118474280|ref|YP_892031.1| hypothetical protein CFF8240_0856 [Campylobacter fetus subsp. fetus 82-40] gi|118413506|gb|ABK81926.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus 82-40] Length = 413 Score = 50.5 bits (120), Expect = 4e-04, Method: Composition-based stats. Identities = 29/138 (21%), Positives = 57/138 (41%), Gaps = 20/138 (14%) Query: 87 KGIVHRY--PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQE 140 K IV Y + +K+ C C +C R + + +L+ A+ Y Sbjct: 121 KNIVSNYENHTKAFIKIQEGCNFKCSYCIIPSVRGKSRSIDEEVILNEAKILASNGY--- 177 Query: 141 KSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197 E++ TG + ++ L K+L+ L IK ++ +R S ++P +I+ Sbjct: 178 ----NEIVLTGTNIGSYGEEKSSSLGKLLQKLGSIKGIKRIRLGS----IEPSQIDESFR 229 Query: 198 QCLKEAGKPVYIAIHANH 215 + L+E+ ++ I H Sbjct: 230 EILQESWLEKHLHIALQH 247 >gi|21226859|ref|NP_632781.1| NifB protein [Methanosarcina mazei Go1] gi|20905162|gb|AAM30453.1| NifB protein [Methanosarcina mazei Go1] Length = 328 Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 48/244 (19%), Positives = 83/244 (34%), Gaps = 46/244 (18%) Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRR------EMVGSQKGTVLSSKDTEAALAYIQE 140 K H++ RI L + C + C FC R G + + E + + Sbjct: 33 KNAQHKF-GRIHLAVAPKCNIQCNFCVREFDCVNESRPGVTSKVLSPREALEKTRQILAD 91 Query: 141 KSQIWEVIFTG-GDPLILSHKRLQ--KVLKTLRYIKHVQI----------------LRFH 181 I V G GDPL + + + ++++ V + LR Sbjct: 92 YPFIKVVAIAGPGDPL-ANDETFETFELIRK--EFPEVTLCMSTNGLMLPEKLPDMLRVG 148 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-----HPYEFS-EEAIAAISRLANAGI 235 V I+PE+ + + H E + + I +AGI Sbjct: 149 VSTLTVTVNAIDPEIQAKIVNH-----VVYHGKVYRGVEAAEIQIKNQLEGIKAAIDAGI 203 Query: 236 ILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA-AGT-SHFRLTIEEGQKI 293 ++ +VL+ GIND + + + R EL + Y ++ L G +H E +K Sbjct: 204 VVKVNTVLIPGIND--KHVVEIARKLNELGV--YIMNVMPLINQGAFAHLEPPTAEERKA 259 Query: 294 VASL 297 V Sbjct: 260 VQEA 263 >gi|319400639|gb|EFV88864.1| molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis FRI909] Length = 340 Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 38/174 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+ Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDYTFLPKDELLTFEELTR-ISKIYAQLGVKKIRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ + L K+++ L I ++ + + LK+ GK +Y Sbjct: 77 PLL--RRNLYKLIEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLYQAGLR 121 Query: 209 -IAIHA-----NHPYEFSEEAIAAISRL------ANAGIILLSQSVLLKGINDD 250 I + N E + I A + L + G + V+ KG+ND+ Sbjct: 122 RINVSLDAIEDNVFQEINNRNIKASTILEQIDYAVSIGFEVKVNVVIQKGVNDN 175 >gi|170289492|ref|YP_001739730.1| radical SAM domain-containing protein [Thermotoga sp. RQ2] gi|170176995|gb|ACB10047.1| Radical SAM domain protein [Thermotoga sp. RQ2] Length = 317 Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 50/218 (22%), Positives = 80/218 (36%), Gaps = 26/218 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI- 156 + C C FC + + G K V S D + S +E+ F GG Sbjct: 6 VFLPYAGCKRRCVFCDQIKATGQTK--VPSLDDIARIIEEYSRTSNEYELGFYGG-TFTG 62 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 LS +++++ L+ ++ V+ +R +R P IN ++ LK+ G V + Sbjct: 63 LSEEKMEEYLRFVKRFPVVKSIRVSTR-----PDEINERKLKILKKYGVNVIEIGVQSFL 117 Query: 217 YEF---------SEEAIAAISRLANAGIILLSQ-SVLLKGINDDPEILANLMRTFVEL-- 264 E SEEA A + G +L V L G + EIL+ L Sbjct: 118 DEVLERSKRGYTSEEAERACKLIKKNGFVLSVHLMVGLPGSDRRGEILSALRTVECGADM 177 Query: 265 -RIKPYYLH----HPDLAAGTSHFRLTIEEGQKIVASL 297 RI P + + + L +EE I + L Sbjct: 178 VRIHPTLVFEGTELHRMMEEGEYTPLNVEEAVDICSDL 215 >gi|323464328|gb|ADX76481.1| conserved hypothetical protein [Staphylococcus pseudintermedius ED99] Length = 449 Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKKVIEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L + ++ +R S ++ ++ E+I+ L+++ K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETVDGLERIRISS----IEASQLTDEVIEVLQQSQK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|315452778|ref|YP_004073048.1| MiaB-like tRNA modifying protein [Helicobacter felis ATCC 49179] gi|315131830|emb|CBY82458.1| MiaB-like tRNA modifying enzyme,2-methylthioadenine synthetase [Helicobacter felis ATCC 49179] Length = 418 Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 56/129 (43%), Gaps = 16/129 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C C +C + G + + + L ++ + I E++ TG Sbjct: 132 KTRAFVKIQEGCDFKCSYCVIPLVRGKSRSLIE-----DQILDQVRVLAQKGIVEIVLTG 186 Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKP 206 + + + ++++ + I+ ++ +R S ++P +I+ E ++ L K Sbjct: 187 TNVGSYGKETRSNIARLIQKIARIEGIKRVRIGS----LEPSQIDAEFLELLDHPILEKH 242 Query: 207 VYIAIHANH 215 ++IA+ +H Sbjct: 243 LHIALQHSH 251 >gi|319892634|ref|YP_004149509.1| MiaB family protein, possibly involved in tRNA or rRNA modification [Staphylococcus pseudintermedius HKU10-03] gi|317162330|gb|ADV05873.1| MiaB family protein, possibly involved in tRNA or rRNA modification [Staphylococcus pseudintermedius HKU10-03] Length = 449 Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKKVIEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L + ++ +R S ++ ++ E+I+ L+++ K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETVDGLERIRISS----IEASQLTDEVIEVLQQSQK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|315658148|ref|ZP_07911020.1| Fe-S oxidoreductase [Staphylococcus lugdunensis M23590] gi|315496477|gb|EFU84800.1| Fe-S oxidoreductase [Staphylococcus lugdunensis M23590] Length = 451 Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + + E++ TG Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKKVVEQATTLV--NAGYKEIVLTGIH 201 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L I ++ +R S ++ ++ E+I ++++ K Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLETIDSLERIRISS----IEASQLTDEVIDVIEKSNK- 253 Query: 207 VYIAIHA 213 V +H Sbjct: 254 VVRHLHI 260 >gi|227501282|ref|ZP_03931331.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Anaerococcus tetradius ATCC 35098] gi|227216515|gb|EEI81921.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Anaerococcus tetradius ATCC 35098] Length = 312 Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 67/165 (40%), Gaps = 27/165 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-----AALAYIQEKSQIWEVIFTGGD 153 + + C C++C +G +L +D +A I I ++ TGG+ Sbjct: 14 ISVTDRCNFRCKYC-----IGDDGVDLLKHEDILSYEEIKEIAEICADFGIKKIRVTGGE 68 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212 P + + L + + L I ++ + + +I +L + L+E G K + ++ Sbjct: 69 PFV--RRGLLNLFEMLTKIDGIEDI-----GVTTNGSKIYDKL-ERLRELGIKRINFSLD 120 Query: 213 A---NHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGIND 249 + + ++ E +I++ G + +VL+KG ND Sbjct: 121 TLDRDKFRQITKVDCLNEVKKSINKALELGFRVKINTVLIKGFND 165 >gi|15615089|ref|NP_243392.1| molybdenum cofactor biosynthesis protein A [Bacillus halodurans C-125] gi|24212015|sp|Q9K9W9|MOAA_BACHD RecName: Full=Molybdenum cofactor biosynthesis protein A gi|10175146|dbj|BAB06245.1| molybdopterin cofactor biosynthesis [Bacillus halodurans C-125] Length = 338 Score = 50.1 bits (119), Expect = 5e-04, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 25/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C ++ G K +LS ++T + + S I ++ TGG+ Sbjct: 19 ISVTDRCNFRCHYCMPADIFGPDYPFLKKTEILSFEETNRLVHLFHQTSPIKKIRITGGE 78 Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211 PL+ +L +L I+ V + + +P ++ LK+AG K V +++ Sbjct: 79 PLMRKDVDQLISMLTATTGIEDVAMTTNGTLLP---------KMADKLKKAGLKRVTVSL 129 Query: 212 HANHPYEF---------SEEAIAAISRLANAGIILLSQSVLLKGIND 249 + +F ++ + + AG+ + V+ KG+ND Sbjct: 130 DSLEDEQFGKINGRGIGTKPVLDGMEAAKEAGLGVKVNMVVQKGVND 176 >gi|254172055|ref|ZP_04878731.1| radical SAM domain protein [Thermococcus sp. AM4] gi|214033951|gb|EEB74777.1| radical SAM domain protein [Thermococcus sp. AM4] Length = 419 Score = 50.1 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 43/184 (23%), Positives = 77/184 (41%), Gaps = 33/184 (17%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-- 145 G++ R + I ++ + C + C FC E S+ + D + + + E ++I Sbjct: 108 GLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167 Query: 146 --EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 E G G+PLI + ++++ LR +V ++ S + + +L++ L E Sbjct: 168 GLEAHLDGQGEPLIYPFRV--ELVQALREHPNVSVISMQSNGTL-----LTDKLVEELAE 220 Query: 203 AGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLANAGIILLSQSVLLKG 246 AG V ++IH E + L NAGI +L V++ G Sbjct: 221 AGLDRVNLSIH-----SLDPEKAKMLMGMKSYDLEHVLEMAEALVNAGIDVLIAPVIIFG 275 Query: 247 INDD 250 INDD Sbjct: 276 INDD 279 >gi|296188253|ref|ZP_06856645.1| putative molybdenum cofactor biosynthesis protein A [Clostridium carboxidivorans P7] gi|296047379|gb|EFG86821.1| putative molybdenum cofactor biosynthesis protein A [Clostridium carboxidivorans P7] Length = 262 Score = 50.1 bits (119), Expect = 6e-04, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 19/118 (16%) Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 +I ++ +TGG+PLIL + + ++ I+ ++ + + ++ +L LKE Sbjct: 2 EIKKIRYTGGEPLILKN--ISSLISETSKIQQIKDIAITTNGILLY------DLADELKE 53 Query: 203 AGKPVYIAIHANHPYE-----FS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 AG + I + E + + + AI + + GI + +VL+KGINDD Sbjct: 54 AGLK-RVNISLDTLKEDKFSYITRGGDLNKVLKAIEKCISLGIKVKVNTVLIKGINDD 110 >gi|289578123|ref|YP_003476750.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter italicus Ab9] gi|289527836|gb|ADD02188.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter italicus Ab9] Length = 449 Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 21/121 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C YC +C + + S++ E L ++ S E++ TG Sbjct: 155 RTRAYVKIQDGCNQYCTYC-----IIPYARGPVRSREPEKILEEVRRFADSGYKEIVLTG 209 Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 D L + L ++K + I ++ +R S P+ E ++ + + Sbjct: 210 IHIASYGKD---LKNIGLLDIIKRIHEIDGIKRIRLSSIEPVFL----TEEFVKEIAKLP 262 Query: 205 K 205 K Sbjct: 263 K 263 >gi|314934315|ref|ZP_07841674.1| molybdenum cofactor biosynthesis protein A [Staphylococcus caprae C87] gi|313652245|gb|EFS16008.1| molybdenum cofactor biosynthesis protein A [Staphylococcus caprae C87] Length = 341 Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 69/177 (38%), Gaps = 44/177 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 L + C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+ Sbjct: 19 LSVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFEEMTR-ISRIYAELGVKKIRITGGE 77 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ + L ++++ L I+ ++ + + LK+ G+ +Y Sbjct: 78 PLL--RRNLYQLIEQLNEIEGIEDIGLTTNGL-------------LLKKHGQNLYNAGLR 122 Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250 I + + +E AI+ +L Q V+ KG+NDD Sbjct: 123 RINVSLDA---IDDEVFQAINNRNIKASTILEQIDYAVSIGFHVKVNVVIQKGVNDD 176 >gi|223042523|ref|ZP_03612572.1| molybdenum cofactor biosynthesis protein A [Staphylococcus capitis SK14] gi|222444186|gb|EEE50282.1| molybdenum cofactor biosynthesis protein A [Staphylococcus capitis SK14] Length = 341 Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 69/177 (38%), Gaps = 44/177 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 L + C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+ Sbjct: 19 LSVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFEEMTR-ISRIYAELGVKKIRITGGE 77 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ + L ++++ L I+ ++ + + LK+ G+ +Y Sbjct: 78 PLL--RRNLYQLIEQLNEIEGIEDIGLTTNGL-------------LLKKHGQNLYNAGLR 122 Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250 I + + +E AI+ +L Q V+ KG+NDD Sbjct: 123 RINVSLDA---IDDEVFQAINNRNIKASTILEQIDYAVSIGFHVKVNVVIQKGVNDD 176 >gi|188997227|ref|YP_001931478.1| Radical SAM domain protein [Sulfurihydrogenibium sp. YO3AOP1] gi|188932294|gb|ACD66924.1| Radical SAM domain protein [Sulfurihydrogenibium sp. YO3AOP1] Length = 208 Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 4/86 (4%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L+ L C C C+ +V G + E L I++ + ++ +GG+P I Sbjct: 21 CLILFLAGCNFRCLHCYNWRVVLDIAGNIP----IERVLEEIEKSPFLECIVISGGEPTI 76 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHS 182 + L +++ T++ + +R + Sbjct: 77 HEPEELIELVNTIKKVNPELKIRIDT 102 >gi|223039951|ref|ZP_03610234.1| conserved hypothetical protein [Campylobacter rectus RM3267] gi|222878819|gb|EEF13917.1| conserved hypothetical protein [Campylobacter rectus RM3267] Length = 431 Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 41/212 (19%), Positives = 78/212 (36%), Gaps = 35/212 (16%) Query: 63 QKEELNILPEEREDPIGDNNH--SPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREMV 118 K+E + +DP + + S K IV Y + +K+ C C +C + Sbjct: 111 SKKEDINALLKSQDPFFELGNLKSIDKNIVTNYENHTKAFIKIQEGCDFACSYCI----I 166 Query: 119 GSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIK 173 + +G S + EA L I + E++ TG + L ++L L + Sbjct: 167 PAVRGKARSMDE-EAILREAKILAYNGYNELVLTGTNIGSYGKDTGSSLGRLLGRLGKVG 225 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 ++ +R S ++P +I+ + L+E+ ++ I H E A+ R+ Sbjct: 226 GIKRIRLGS----IEPSQIDESFREILRESWLERHLHIALQHTSE-------AMLRIMRR 274 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELR 265 +Q+ D E+ L L Sbjct: 275 ----RNQAF------RDLELFLELSEMGFALG 296 >gi|240102758|ref|YP_002959067.1| Radical SAM protein, elongator protein 3/MiaB/NifB related [Thermococcus gammatolerans EJ3] gi|239910312|gb|ACS33203.1| Radical SAM protein, elongator protein 3/MiaB/NifB related [Thermococcus gammatolerans EJ3] Length = 419 Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 46/199 (23%), Positives = 81/199 (40%), Gaps = 38/199 (19%) Query: 78 IGDNNHSPL-----KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 I + PL G++ R + I ++ + C + C FC E S+ + D + Sbjct: 93 IHEALDVPLLGYNAFGLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDID 152 Query: 133 AALAYIQEKSQIW----EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + + E ++I E G G+PLI + ++++ LR +V ++ S + Sbjct: 153 YLMKWFDEVARIKGKGLEAHLDGQGEPLIYPFRV--ELVQALREHPNVSVISMQSNGTL- 209 Query: 188 DPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLA 231 + +L++ L EAG V ++IH E + L Sbjct: 210 ----LTDKLVEELAEAGLDRVNLSIH-----SLDPEKAKMLMGMKSYDLDHVLEMAEALV 260 Query: 232 NAGIILLSQSVLLKGINDD 250 NAGI +L V++ GINDD Sbjct: 261 NAGIDVLIAPVIIFGINDD 279 >gi|116753747|ref|YP_842865.1| radical SAM domain-containing protein [Methanosaeta thermophila PT] gi|116665198|gb|ABK14225.1| Radical SAM domain protein [Methanosaeta thermophila PT] Length = 365 Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 66/162 (40%), Gaps = 20/162 (12%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 +P ++L + C + C +C+ G + + A+ + E + ++V GG Sbjct: 22 HPRTLILWVTTDCNLRCVYCYAN---GGDNKAYMGWDVAKRAIDLVAEGADCFKVQLAGG 78 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 +PL L+ +++++ + + ++ + ++ P + L+ G V +++ Sbjct: 79 EPL-LNFGLIERIVFYIHDLGADASIQLQTNATLISPA-----IASRLRALGIGVGVSLD 132 Query: 213 ----AN-HPYEF------SEEAIAAISRLANAGIILLSQSVL 243 N H F + I I L +AGI + SVL Sbjct: 133 GVPAINDHLRPFADGHGSTHSVINGIRNLRDAGISVGMTSVL 174 >gi|220904538|ref|YP_002479850.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868837|gb|ACL49172.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 344 Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 55/167 (32%), Gaps = 31/167 (18%) Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C VL ++ + I + + +V TGG+P Sbjct: 29 LSVTDRCNLRCMYCCSNARQTCIPHTQVLRYEEMARMVG-IMARLGVTKVRLTGGEPFAR 87 Query: 158 S--HKRLQKVLKTLRYI------------KHVQILR-FHSRVPIVDPQRINPELIQCLKE 202 L + + H+ +LR + + + E + Sbjct: 88 KGCDGFLYMLHSRFPDMDLRLTTNGTLLEPHIPLLRQVGVKAVNLSLDSFDRETFAKVTG 147 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 + ++A+ RL +AGI + +V ++G+ND Sbjct: 148 --------------RDMQPAVLSALDRLLSAGIRVKVNAVAMRGVND 180 >gi|258424004|ref|ZP_05686886.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9635] gi|257845625|gb|EEV69657.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9635] Length = 448 Score = 49.7 bits (118), Expect = 6e-04, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S+ E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSEYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|268679888|ref|YP_003304319.1| MiaB-like tRNA modifying enzyme [Sulfurospirillum deleyianum DSM 6946] gi|268617919|gb|ACZ12284.1| MiaB-like tRNA modifying enzyme [Sulfurospirillum deleyianum DSM 6946] Length = 414 Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 33/184 (17%), Positives = 65/184 (35%), Gaps = 33/184 (17%) Query: 89 IVHRY--PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQI 144 IVH Y + +K+ C C +C V S+D + + ++ + Sbjct: 124 IVHEYTGKTKAFIKIQEGCNFRCSYCII-PFVRGN----ARSQDEQKIIEQVEKLALNGY 178 Query: 145 WEVIFTGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 E + TG + + L ++++ L I+ V+ +R S ++P +I+ + L Sbjct: 179 GEFVLTGTNIGSYGKDKGSSLGRLVQRLGAIRGVRRIRLGS----IEPVQIDESFREILN 234 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 E ++ I H E A+ +L + + D E+ L Sbjct: 235 EPWLERHLHIALQHTSE-------AMLQLMRR----RN------NVKRDLELFMELGEKG 277 Query: 262 VELR 265 L Sbjct: 278 FALG 281 >gi|307636979|gb|ADN79429.1| MiaB family protein [Helicobacter pylori 908] gi|325995571|gb|ADZ50976.1| MiaB-like tRNA modifying enzyme [Helicobacter pylori 2018] gi|325997166|gb|ADZ49374.1| putative MiaB like protein [Helicobacter pylori 2017] Length = 418 Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 16/129 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKP 206 + R + +++K L I ++ +R S ++P +IN E ++ L E K Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQITGLKRIRIGS----LEPNQINDEFLELLGEDFLEKH 243 Query: 207 VYIAIHANH 215 ++IA+ +H Sbjct: 244 LHIALQHSH 252 >gi|157164712|ref|YP_001466755.1| hypothetical protein CCC13826_0085 [Campylobacter concisus 13826] gi|157101465|gb|EAT97324.2| conserved hypothetical protein [Campylobacter concisus 13826] Length = 412 Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 35/192 (18%), Positives = 65/192 (33%), Gaps = 41/192 (21%) Query: 83 HSPLKGIVHRY--PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALA 136 +S K IV Y + +K+ C C +C R + + +L A Sbjct: 117 NSVDKNIVTNYENHTKAFIKIQEGCNFNCSYCIIPSVRGKARSMDEAMILKEARILAQNG 176 Query: 137 YIQEKSQIWEVIFTGGDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 Y E++ TG + ++ L K+L L I ++ +R S ++P +I+ Sbjct: 177 Y-------NELVLTGTNIGSYGKDTNSSLGKLLANLGKISGIRRIRLGS----IEPSQID 225 Query: 194 PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 + LKE ++ I H A+ + +++ N+ Sbjct: 226 ESFREILKEEWLERHLHIALQH-------TSQAMLK-------------IMRRRNNAFSD 265 Query: 254 LANLMRTFVELR 265 L L L Sbjct: 266 L-ELFNELSSLG 276 >gi|297570341|ref|YP_003691685.1| molybdenum cofactor biosynthesis protein A [Desulfurivibrio alkaliphilus AHT2] gi|296926256|gb|ADH87066.1| molybdenum cofactor biosynthesis protein A [Desulfurivibrio alkaliphilus AHT2] Length = 368 Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 42/187 (22%), Positives = 77/187 (41%), Gaps = 16/187 (8%) Query: 84 SPLKGIV--H-RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 P+ G+ H R + + L + C + CR+C + + +LS ++ E + Sbjct: 37 EPVSGLTDNHGRMVNYVRLAVTDRCNLNCRYCRPKGPCNEPRRELLSYEELERICRLLVA 96 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 I +V TGG+PL+ + L+ LR IK +Q L + ++ P ++ L Sbjct: 97 M-GISKVRVTGGEPLV--RHGMLGFLRQLRDIKGLQQLALTTNATLLAPHL---SELRQL 150 Query: 201 KEAGKPVYIAI------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEI 253 + +G + + A + A I AG+ + +V+ +GIN D+ Sbjct: 151 RLSGLNISLDTLQPERFAAITGQDLFARVFAVIEAAVAAGMPVKINAVVQEGINTDELLE 210 Query: 254 LANLMRT 260 LA L Sbjct: 211 LARLAEK 217 >gi|206895763|ref|YP_002246862.1| oxygen-independent coproporphyrinogen III oxidase [Coprothermobacter proteolyticus DSM 5265] gi|206738380|gb|ACI17458.1| oxygen-independent coproporphyrinogen III oxidase [Coprothermobacter proteolyticus DSM 5265] Length = 258 Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 17/120 (14%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTG 151 YP + C C FC +R + + E A YIQ+ + + E+ F G Sbjct: 4 YP---VFLSHAGCRQRCVFCNQRA----AERIKPWKESIEEAFHYIQKSNLVYDEIAFYG 56 Query: 152 GDPLILSHKRLQKVLKT---LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 G P S L+ +L+ I ++ +R +R P IN +IQ L + G Sbjct: 57 GTP-TSSENLLKDILQPFQTFLKIGKIKGIRISTR-----PDEINESIIQILVDYGVSTV 110 >gi|281416862|ref|ZP_06247882.1| RNA modification enzyme, MiaB family [Clostridium thermocellum JW20] gi|281408264|gb|EFB38522.1| RNA modification enzyme, MiaB family [Clostridium thermocellum JW20] Length = 434 Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 49/116 (42%), Gaps = 11/116 (9%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 V++ R +K+ C +C +C G + S ++ ++ + S EV+ Sbjct: 138 VYKERTRAFIKIQEGCNQFCTYCIIPYARGPVRSR--SEENILKEVSGL-AHSGYKEVVL 194 Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 TG + + L +++ + I+ ++ +R S ++P + E ++ +K Sbjct: 195 TGIHVASYGKDIKNTSLIDIIRKVHEIEGIERIRLGS----IEPTTVTEEFVRAIK 246 >gi|107022977|ref|YP_621304.1| molybdenum cofactor biosynthesis protein A [Burkholderia cenocepacia AU 1054] gi|116686780|ref|YP_840027.1| molybdenum cofactor biosynthesis protein A [Burkholderia cenocepacia HI2424] gi|105893166|gb|ABF76331.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia AU 1054] gi|116652495|gb|ABK13134.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia HI2424] Length = 374 Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 58/233 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154 L ++ C C +C RE G+ + SS+ A L I + ++ TGG+P Sbjct: 46 LSVIDQCNFRCGYCMPRESFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEP 105 Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192 L+ + L+ +++ L + V + LR SRV + + Sbjct: 106 LL--RRNLEALIERLAALTTVDGKPVEIALTTNGSLLAAKARALRDAGLSRVTVSL-DAL 162 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251 + + + + +A PV + A I AG + +V+ +G+NDD Sbjct: 163 DDAVFRRMSDADVPVARVL-------------AGIEAAHAAGLAPVKVNAVIERGVNDD- 208 Query: 252 EILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296 + L+R F + Y G S + + ++++ Sbjct: 209 -QILPLVRHFRHTGVAVRFIEY-----MDVGGASFWSGDKVVPAARMRELIDE 255 >gi|125972674|ref|YP_001036584.1| RNA modification protein [Clostridium thermocellum ATCC 27405] gi|256004833|ref|ZP_05429807.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM 2360] gi|125712899|gb|ABN51391.1| RNA modification enzyme, MiaB family [Clostridium thermocellum ATCC 27405] gi|255991143|gb|EEU01251.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM 2360] gi|316941090|gb|ADU75124.1| RNA modification enzyme, MiaB family [Clostridium thermocellum DSM 1313] Length = 434 Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 49/116 (42%), Gaps = 11/116 (9%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 V++ R +K+ C +C +C G + S ++ ++ + S EV+ Sbjct: 138 VYKERTRAFIKIQEGCNQFCTYCIIPYARGPVRSR--SEENILKEVSGL-AHSGYKEVVL 194 Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 TG + + L +++ + I+ ++ +R S ++P + E ++ +K Sbjct: 195 TGIHVASYGKDIKNTSLIDIIRKVHEIEGIERIRLGS----IEPTTVTEEFVRAIK 246 >gi|310779932|ref|YP_003968264.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926] gi|309749255|gb|ADO83916.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926] Length = 292 Score = 49.7 bits (118), Expect = 7e-04, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 55/152 (36%), Gaps = 19/152 (12%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWEVIFTGGDP 154 +LL++ C C FC ++ KD + A + I V GD Sbjct: 17 LLLQVTVGCAHNKCAFCTMYRETQFSTESIEQVEKDLKEAR---KIHKSIKRVFLVNGDA 73 Query: 155 LILSHKRLQKVLKT-LRYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 +L RL+ + + + Y V+++ H + + EL + K +++ + Sbjct: 74 FVLGASRLKPIAEKIIEYFPEVEVITMYAH---INNIKGKTDEELKELAKLRINDLWVGV 130 Query: 212 HANHPYEFS--------EEAIAAISRLANAGI 235 H EEA + RL +AGI Sbjct: 131 ETGHEEALKYLDKGFNLEEAKEQLKRLGDAGI 162 >gi|313904622|ref|ZP_07837997.1| Radical SAM domain protein [Eubacterium cellulosolvens 6] gi|313470592|gb|EFR65919.1| Radical SAM domain protein [Eubacterium cellulosolvens 6] Length = 457 Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 44/239 (18%), Positives = 86/239 (35%), Gaps = 52/239 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWEVIFTGGDPL 155 + C C +CF VG ++ + E + YI E ++++ GG+PL Sbjct: 119 IFPTSTCNAKCVYCFEENFVG----YTMTKEVQEQVVKYILETKMPGHAIDLLWFGGEPL 174 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAI-- 211 I K + + LR V+ + + + + + ++ +K + V I + Sbjct: 175 I-GAKIIDYICSELRKNG-VEF----TSMIVTNASLLTEDVADRMKNDWNIRQVQITLDG 228 Query: 212 ----------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN---DDPEILANLM 258 + + + +AIAAI R+++ GI VL++ +N ++ E L L+ Sbjct: 229 TQEEYDARKCYIDDSRSYFPQAIAAIHRVSDRGIP-----VLIR-LNLDRNNAENLRELI 282 Query: 259 RTF-------VELRIKPYYLHHPDLAAGTSHFRLTIEEGQK--IVASLK--EKISGLCQ 306 L + P LH G ++ + SGL + Sbjct: 283 DYLEVEFPKKNNLYVYPGLLHQLMREKNAMDMW-----GVHASLMEYARSKGFCSGLMR 336 >gi|15807624|ref|NP_293989.1| molybdenum cofactor biosynthesis protein A [Deinococcus radiodurans R1] Length = 247 Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 40/182 (21%), Positives = 69/182 (37%), Gaps = 26/182 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C + C +C E+ G + +LS ++ E ++ TGG+ Sbjct: 15 ISVTDRCNLRCTYCMPAEVFGPDYAFLPRAELLSFEEIERLARVFVGLGA-EKLRITGGE 73 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIH 212 P + L ++L L VQ L + + P L LK AG V I++ Sbjct: 74 PTLRRD--LPELLARLAAFPGVQDLAMTTNGL------LLPRLAADLKAAGLQRVTISLD 125 Query: 213 ANHPY---EFSEE------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 + P E + + I +AG+ + +V+ +G+ND E L L R E Sbjct: 126 SLDPQVFGEMNGLGVSPQKVLGGIEAALHAGLGVKINTVVKRGVND--EHLTELWRGLRE 183 Query: 264 LR 265 Sbjct: 184 FG 185 >gi|331090850|ref|ZP_08339696.1| hypothetical protein HMPREF9477_00339 [Lachnospiraceae bacterium 2_1_46FAA] gi|330399709|gb|EGG79371.1| hypothetical protein HMPREF9477_00339 [Lachnospiraceae bacterium 2_1_46FAA] Length = 437 Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 71/188 (37%), Gaps = 41/188 (21%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q + T + Sbjct: 82 LMDEYRSCRNKCMFCFIDQMPKGMRDTLYFKDD-DSRLSFLQGN----YITLT-----NM 131 Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 S +++++K L I + H+ +P+ L+ +H Sbjct: 132 SDDDVRRIVKYHLEPI----NISIHT----TNPE---------LR------CKMLH---- 164 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 F+ EA+ + L GI + Q VL KG ND E+ ++ + PY + Sbjct: 165 NRFAGEALKKVDILYEGGITMNGQIVLCKGENDGEELERSIRD---MTKYLPYLQSVSVV 221 Query: 277 AAGTSHFR 284 G + +R Sbjct: 222 PVGLTKYR 229 >gi|291522203|emb|CBK80496.1| Fe-S oxidoreductase, related to NifB/MoaA family [Coprococcus catus GD/7] Length = 444 Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 65/162 (40%), Gaps = 38/162 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF ++ + T+ D ++ L+++Q + T + Sbjct: 83 LMDDYRSCSNNCIFCFIDQLPKGMRETMYFKDD-DSRLSFLQGN----YITMT-----NM 132 Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + L+++++ L I + H+ +P+ L+ + +H Sbjct: 133 KDEALERIIRYKLEPI----NVSVHT----TNPE---------LR------CMMLH---- 165 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 F+ + + + +L GII+ Q VL K +ND E+ ++ Sbjct: 166 NRFAGKIMEQLQKLYEGGIIMNGQIVLCKNVNDGEELERSIR 207 >gi|62184901|ref|YP_219686.1| hypothetical protein CAB260 [Chlamydophila abortus S26/3] gi|62147968|emb|CAH63716.1| conserved hypothetical protein [Chlamydophila abortus S26/3] Length = 421 Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 35/195 (17%), Positives = 64/195 (32%), Gaps = 45/195 (23%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R +K+ C +C +C + G + S+ + L I EV+ G Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSR-----SRPVQEILEEISGLVSQGYREVVIAG 188 Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + K L ++ + I ++ +R S +DP+ + +L L +GK Sbjct: 189 INVGDYQDQGKSLAYLISQVDEIPGIERIRISS----IDPEDVQDDLRDVLL-SGKHTC- 242 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQS---VLLKGIND--DPEILANLMRTFVEL 264 H++H L+ QS +LK +N + + Sbjct: 243 --HSSH---------------------LVLQSGSNAILKRMNRKYSRGDFLDCVEALRSA 279 Query: 265 RIKPYYLHHPDLAAG 279 P Y D+ G Sbjct: 280 --DPQYTFTTDVIVG 292 >gi|301165856|emb|CBW25429.1| conserved hypothetical protein [Bacteriovorax marinus SJ] Length = 433 Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 28/115 (24%), Positives = 49/115 (42%), Gaps = 10/115 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C C FC + + + E A I++ E++ TG Sbjct: 144 HTRAFLKIQDGCNYVCSFCII-PFARGRSKAISINGALENAKKLIED--GFKEIVLTGVN 200 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G+ S ++L ++K L ++ ++ LR S V+P I EL++ K + K Sbjct: 201 IGEYETSSGEKLTDMVKALLDLEGLERLRLSS----VEPNTITDELLEVFKSSPK 251 >gi|52787593|ref|YP_093422.1| molybdenum cofactor biosynthesis protein A [Bacillus licheniformis ATCC 14580] gi|163119684|ref|YP_080993.2| molybdenum cofactor biosynthesis protein A [Bacillus licheniformis ATCC 14580] gi|319648075|ref|ZP_08002292.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. BT1B_CT2] gi|81608871|sp|Q65DY5|MOAA_BACLD RecName: Full=Molybdenum cofactor biosynthesis protein A gi|52350095|gb|AAU42729.1| MoaA [Bacillus licheniformis ATCC 14580] gi|145903194|gb|AAU25355.2| MoaA [Bacillus licheniformis ATCC 14580] gi|317389710|gb|EFV70520.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. BT1B_CT2] Length = 341 Score = 49.3 bits (117), Expect = 8e-04, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 68/173 (39%), Gaps = 39/173 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C + C +C E+ G KG +LS ++ E + + ++ TGG+ Sbjct: 21 ISVTDRCNLRCTYCMPAEIFGQDYPFLPKGELLSFEELERLAKLFVHQFGVEKIRLTGGE 80 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSR---VPIVDPQRINPELIQCLKEAG-KPVYI 209 PL+ + +++ L IK ++ + + +P+ LK+AG K V + Sbjct: 81 PLMRKD--MPELVGKLAGIKGIRDIAMTTNGVLLPVY---------ADKLKKAGLKRVTV 129 Query: 210 AIHANHPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGIN 248 ++ +E +A I AG+ + V+ KG+N Sbjct: 130 SL-----DSLDDERFKSINGRGVSVSKVLAGIEAAKKAGLGVKINMVVQKGVN 177 >gi|295092927|emb|CBK82018.1| MiaB-like tRNA modifying enzyme [Coprococcus sp. ART55/1] Length = 452 Score = 49.3 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 23/151 (15%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 E D + + + G V R +K+ C +C +C + + S+ Sbjct: 134 EYFVDISRETEYEEMGGHVPVGHTRAYVKIQDGCNQFCSYC-----IIPYVRGRIRSRSQ 188 Query: 132 EAALAYIQEKSQ--IWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 EA LA + E ++ I EV+ TG D + L ++++ + IK ++ +R S Sbjct: 189 EAILAEVSELAEAGIKEVVLTGIHISSYGKD--KNNEGALIELIEAISKIKGIKRIRLGS 246 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 ++P I E ++ + K + H Sbjct: 247 ----LEPGIITEEFVERISSNSK---VCPHF 270 >gi|313633909|gb|EFS00625.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri FSL N1-067] Length = 335 Score = 49.3 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 73/191 (38%), Gaps = 23/191 (12%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + I K I + Sbjct: 11 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVGFME-IMVKFGIKK 66 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 67 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 118 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDDPEILAN 256 V I++ + H F I + G + VL+KG NDD Sbjct: 119 RVNISLDSLHADRFQTITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDXX 178 Query: 257 LMRTFVELRIK 267 ++ I+ Sbjct: 179 QFTKDKDINIR 189 >gi|310643276|ref|YP_003948034.1| gtp cyclohydrolase subunit moaa [Paenibacillus polymyxa SC2] gi|309248226|gb|ADO57793.1| GTP cyclohydrolase subunit MoaA [Paenibacillus polymyxa SC2] Length = 338 Score = 49.3 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 69/190 (36%), Gaps = 44/190 (23%) Query: 86 LKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ- 143 LK ++ R P R L + + C C +C +E+ G + S+ + I ++ Sbjct: 6 LKDLLRR-PIRDLRISVTDRCNFRCSYCMPKEIFGDDFAFLPKSECL--SFEEIHRLTEL 62 Query: 144 -----IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL--------------RF---H 181 + ++ TGG+PL+ + L ++ + I V+ + R Sbjct: 63 FVGLGVKKIRLTGGEPLMRPN--LPDLVSRILSINGVEDMGLTTNGLLLGQQAQRLYDAG 120 Query: 182 SRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 R V +NPEL + G KP +I + E G + Sbjct: 121 LRRLNVSVDALNPELFGRMNGRGIKPAFILKQIDCAREI--------------GFEIKVN 166 Query: 241 SVLLKGINDD 250 V+ KG+ND Sbjct: 167 MVVQKGVNDS 176 >gi|282890695|ref|ZP_06299215.1| hypothetical protein pah_c026o007 [Parachlamydia acanthamoebae str. Hall's coccus] gi|281499288|gb|EFB41587.1| hypothetical protein pah_c026o007 [Parachlamydia acanthamoebae str. Hall's coccus] Length = 430 Score = 49.3 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 51/130 (39%), Gaps = 18/130 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R +K+ C +C +C + G + + + + I E++ TG Sbjct: 133 HTRAFVKVQDGCNEFCTYCIIPYVRGRSRSRTIP-EIIDEVKDLISN--GFKEIVLTGIN 189 Query: 152 -----GDPLI-LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL---KE 202 G+P+ + RL +++ + + ++ LR S +DP I+ EL + + Sbjct: 190 IGDFDGNPVEGMPPHRLVDLVRAVDQVPGLKRLRISS----IDPDEIDDELADAVLNGAK 245 Query: 203 AGKPVYIAIH 212 ++I + Sbjct: 246 TCHSMHIVLQ 255 >gi|242243931|ref|ZP_04798374.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus epidermidis W23144] gi|242232564|gb|EES34876.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus epidermidis W23144] Length = 340 Score = 49.3 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 38/174 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+ Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDYTFLPKDELLTFEELTR-ISKIYAQLGVKKIRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ + L K+++ L I ++ + + LK+ GK +Y Sbjct: 77 PLL--RRNLYKLVEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLYQAGLR 121 Query: 209 -IAIHA-----NHPYEFSEEAIAAISRL------ANAGIILLSQSVLLKGINDD 250 I + N E + I A + L + G + V+ KG+ND+ Sbjct: 122 RINVSLDAIEDNVFQEINNRNIKASTILEQIDYAVSIGFEVKVNVVIQKGVNDN 175 >gi|317128920|ref|YP_004095202.1| molybdenum cofactor biosynthesis protein A [Bacillus cellulosilyticus DSM 2522] gi|315473868|gb|ADU30471.1| molybdenum cofactor biosynthesis protein A [Bacillus cellulosilyticus DSM 2522] Length = 339 Score = 49.3 bits (117), Expect = 9e-04, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 65/170 (38%), Gaps = 31/170 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-AALAYIQ----EKSQIWEVIFTGGD 153 L + C CR+C E+ + ++ +AYI + + I +V TGG+ Sbjct: 18 LSVTDRCNFRCRYCMPPEIFDKNFQFLPKNEVLTLEEMAYITKLFVKAASIKKVRITGGE 77 Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-------RINPELIQCLKE--- 202 PL+ + L +++ + I+ + + S +P + R+ L CL + Sbjct: 78 PLMRQNVSHLIALIREIEAIEDIAMTTNGSLLPKYAKELKENGLDRVTISL-DCLDDEKF 136 Query: 203 ---AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 G+ + + + I AG+ + V+ +G+ND Sbjct: 137 RYINGRDISVNT-----------VLEGIKAAKKAGLHVKINMVVKRGMND 175 >gi|225166845|ref|YP_002650830.1| putative molybdenum cofactor biosynthesis protein A [Clostridium botulinum] gi|253771364|ref|YP_003034203.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum D str. 1873] gi|225007509|dbj|BAH29605.1| putative molybdenum cofactor biosynthesis protein A [Clostridium botulinum] gi|253721341|gb|ACT33634.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum D str. 1873] Length = 320 Score = 49.3 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 68/165 (41%), Gaps = 23/165 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156 + L C + C +C +E ++ + E + +++ I +V +TGG+PLI Sbjct: 14 ISLTEKCNLKCIYCMPKESYLEERHCTKKISN-EEIIKFLKASVNLGIKKVRYTGGEPLI 72 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + + K++ I + + + ++ ++++ LK +G + I + Sbjct: 73 VKD--IDKLIYDTGKIPEINDISITTNGILLY------DMVEELKNSGLK-RVNISLDTL 123 Query: 217 YE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E + + I + + G+ L VLLKGINDD Sbjct: 124 KEDRFKKITRNGDINKVFQGIDKCLSLGMTPLKINVVLLKGINDD 168 >gi|222529152|ref|YP_002573034.1| radical SAM domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222455999|gb|ACM60261.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 341 Score = 49.3 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 18/154 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + CP C FC ++ + G ++ L + E L I ++ E+ + GG+ Sbjct: 8 IFIPQYACPFNCIFCNQKTISGEKEEVSLDRIKRQIEQGLK-INSDEEV-ELAYYGGNFT 65 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIH 212 + +K+L+ + ++ +R +R P I+ E ++ LK I Sbjct: 66 AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLRLLKLYNVRTIELGIQSM 120 Query: 213 ANHPYEFSE------EAIAAISRLANAGIILLSQ 240 +H S + A+ + G +L Q Sbjct: 121 FDHVLNASARGHTAQHSKNAMEMIKKFGFLLGVQ 154 >gi|158319633|ref|YP_001512140.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus oremlandii OhILAs] gi|238065284|sp|A8MLX7|RIMO_ALKOO RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|158139832|gb|ABW18144.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus oremlandii OhILAs] Length = 438 Score = 49.3 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 25/161 (15%) Query: 93 YPDRIL--------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 Y +R+L LK+ C +C +C + G + +D + ++ I Sbjct: 127 YHNRVLTTGSNMAYLKIGEGCDNHCTYCAIPNIQGPYISRTM--EDILKEARNLAKQ-GI 183 Query: 145 WEVIFTGGD----PL-ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 E+I D L I RL ++L+ L I+ ++ +RF V P+ I ELI+ Sbjct: 184 KELIVIAQDTTKYGLDIYGEARLPQLLEELCKIEDIEWVRF----LYVYPESITDELIKV 239 Query: 200 LKEAGKPV-YIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 + E K Y I H S+ + ++R + G + + Sbjct: 240 VGENDKICNYFDIPIQH---ISDSVLKRMNR-KSDGASVRN 276 >gi|194336995|ref|YP_002018789.1| nitrogenase cofactor biosynthesis protein NifB [Pelodictyon phaeoclathratiforme BU-1] gi|194309472|gb|ACF44172.1| nitrogenase cofactor biosynthesis protein NifB [Pelodictyon phaeoclathratiforme BU-1] Length = 423 Score = 49.3 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 44/218 (20%), Positives = 79/218 (36%), Gaps = 50/218 (22%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQE----KSQI 144 H++ RI L + C + C +C R+ ++ ++SK A+ Y+ + I Sbjct: 17 HKF-GRIHLPVAPKCNIQCNYCNRKFDCMNENRPGVTSKILSSGQAMHYLDQAMILSPNI 75 Query: 145 WEVIFTG-GDPLILSHKR------------------------LQKVLKTLRY--IKHVQI 177 V G GDP + L + L + HV Sbjct: 76 AVVGIAGPGDPFANPDETMETLRLVRAKYPEMLLCMATNGLDLAPYIDELAELQVSHV-T 134 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 + ++ P+ I E+ ++ K +Y + + ++ + A+ +L AGI Sbjct: 135 ITINAIDPV-----IGSEIYAWVR-HNKKMYRDL--DAAKLLIDKQLEALKKLKAAGITA 186 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELR-----IKPYY 270 S+++ GIND+ I R EL PYY Sbjct: 187 KVNSIIIPGINDNHVIEVA--RKVAELGADILNCMPYY 222 >gi|85860740|ref|YP_462942.1| molybdenum cofactor biosynthesis protein A [Syntrophus aciditrophicus SB] gi|85723831|gb|ABC78774.1| molybdenum cofactor biosynthesis protein A [Syntrophus aciditrophicus SB] Length = 345 Score = 49.3 bits (117), Expect = 0.001, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 70/165 (42%), Gaps = 23/165 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C + CR+C E + S+ VLS + + + + I +V TGG+PL+ Sbjct: 33 ISVTDRCNLRCRYCMPEEGIESKLGHEGVLSLEAFARVVR-LAAQVGIRKVRLTGGEPLV 91 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + + ++++ + + + + + + P + + LK AG + I + Sbjct: 92 --RRNIPQLIRYIADVPQIDDIALTTNGILFAP------MAEELKAAGLN-RVNISLDSF 142 Query: 217 YE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E + ++A AI + + + +V+++G NDD Sbjct: 143 KEDRFRFITRVGNLDQAKKAIFKALELKMNPVKINTVVIRGFNDD 187 >gi|313638470|gb|EFS03650.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri FSL S4-171] Length = 335 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + I K I + Sbjct: 11 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEI-VGFMAIMVKFGIKK 66 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 67 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 118 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + G + VL+KG NDD Sbjct: 119 RVNISLDSLHADRFQTITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 172 >gi|212223647|ref|YP_002306883.1| Hypothetical molybdenum cofactor biosynthesis protein A [Thermococcus onnurineus NA1] gi|212008604|gb|ACJ15986.1| Hypothetical molybdenum cofactor biosynthesis protein A [Thermococcus onnurineus NA1] Length = 419 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 82/199 (41%), Gaps = 38/199 (19%) Query: 78 IGDNNHSPL-----KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 I + PL G++ R + I ++ + C + C FC E S+ + D + Sbjct: 93 IHEGMDVPLLGYNAFGLIDRGTNLIQIRGVSGCNLSCIFCSVDEGPYSRTRKLDYVVDID 152 Query: 133 AALAYIQEKSQIW----EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 + + + +QI E G G+PL+ + ++++ LR +V+++ S + Sbjct: 153 YLIKWFDDVAQIKGKGLEAHLDGQGEPLLYPFRV--ELVQALREHPNVRVISMQSNGTL- 209 Query: 188 DPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLA 231 +N L++ L EAG V +++H E + L Sbjct: 210 ----LNDRLVEELAEAGLDRVNLSLH-----SLDPEKAKMLMGRKDYDLQHVLDMAEALV 260 Query: 232 NAGIILLSQSVLLKGINDD 250 NAG+ +L V++ GIND+ Sbjct: 261 NAGVDVLIAPVIIFGINDN 279 >gi|194334917|ref|YP_002016777.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris aestuarii DSM 271] gi|194312735|gb|ACF47130.1| molybdenum cofactor biosynthesis protein A [Prosthecochloris aestuarii DSM 271] Length = 336 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 50/279 (17%), Positives = 100/279 (35%), Gaps = 57/279 (20%) Query: 79 GDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAA 134 + SPLK + RY + L + C + C +C R V + +G LS + + Sbjct: 5 HNAVSSPLKPLSDRYRRTVDYVRLAVTSQCNLRCMYCMREEHTVYNPEGEALSGDEIVSM 64 Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR----------- 183 LA + + +V +TGG+PL+ + ++++ + ++ ++ + + Sbjct: 65 LAVLARM-GVSKVRYTGGEPLLRQD--IVRLVRDAKALEGIETVSLTTNGLLLDRYLDDL 121 Query: 184 ------VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY--EFSEEAIAAISRLANAGI 235 +PE + + + ++ +H+N E + I Sbjct: 122 VAAGIDAINFSLDTFDPERYREI--TRRNLFDKVHSNLLRLLECDALLVK---------I 170 Query: 236 ILLSQSVLLKGIN-DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSH--FRLTIEEGQK 292 +L LL+ +N D+ L R +P + +L H +R G Sbjct: 171 NVL----LLRKVNIDEITTFVELTRD------RPVTVRFMELMPFDDHQIWRTGKFMGAD 220 Query: 293 -IVASLKEKIS------GLCQPFYILDLPGGYGKVKIDT 324 I+ +L G ++ LPG GKV + Sbjct: 221 KILETLHACYPDLQPMQGDATEYFSFSLPGYKGKVSVIP 259 >gi|302037249|ref|YP_003797571.1| putative tRNA modifying enzyme, MiaB-like [Candidatus Nitrospira defluvii] gi|300605313|emb|CBK41646.1| putative tRNA modifying enzyme, MiaB-like [Candidatus Nitrospira defluvii] Length = 447 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 21/162 (12%) Query: 31 ISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIV 90 + + + L + P + +Q P+ E + +RED + L G Sbjct: 101 VGTQFKMNLPDYL------PAPAK-LRKQ--PEPELRHSRTIDREDFV-------LPGTA 144 Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 + R LLK+ C C FC ++ + + A + E++ T Sbjct: 145 YSDSTRALLKIQDGCDFMCSFCLI-PFARGRERSRTAEDVLREARE-LAAH-GYRELVLT 201 Query: 151 GGDPLILSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQ 190 G + S++ L ++L+ L + V +R S P P Sbjct: 202 GVNIGRYSYQGLGLVELLRELESVPDVTRIRISSIEPTTVPA 243 >gi|281413068|ref|YP_003347147.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10] gi|281374171|gb|ADA67733.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10] Length = 317 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 50/221 (22%), Positives = 83/221 (37%), Gaps = 32/221 (14%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI- 156 + C C FC + + G K V S D + S +E+ F GG Sbjct: 6 VFLPYAGCKKRCVFCDQIKATGQTK--VPSLDDIARIIEEYSRTSNEYELGFYGG-TFTG 62 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 LS +++++ L+ ++ V+ +R +R P IN ++ LK+ G V + Sbjct: 63 LSEEQMEEYLRFVKGFPVVKSIRVSTR-----PDEINERKLKILKKYGVNVIEVGVQSFL 117 Query: 217 YEF---------SEEAIAAISRLANAGIILLSQSV-LLKGI---NDDPEILANLMRTFVE 263 E S+EA A + G +L SV L+ G+ + EIL+ L Sbjct: 118 DEVLERSKRGYTSKEAERACKLIKKNGFVL---SVHLMVGLPRSDRRGEILSALRTVECG 174 Query: 264 L---RIKPYYLH----HPDLAAGTSHFRLTIEEGQKIVASL 297 RI P + + + L +EE I + L Sbjct: 175 ADMVRIHPTLVFEGTELHRMMKEKGYTPLDVEEAVDICSDL 215 >gi|197303727|ref|ZP_03168764.1| hypothetical protein RUMLAC_02456 [Ruminococcus lactaris ATCC 29176] gi|197297247|gb|EDY31810.1| hypothetical protein RUMLAC_02456 [Ruminococcus lactaris ATCC 29176] Length = 438 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 23/129 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152 R +K+ C +C +C G + S +D + + E EV+ TG Sbjct: 150 HTRAYIKVQDGCNQFCTYCIIPYARGRVRSR--SMEDVTEEVRTLAEN-GYKEVVLTGIH 206 Query: 153 --------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 D + L +++ + I+ ++ +R S ++P I E + + + Sbjct: 207 LSSYGIDFD----KERHLLDLIRAVHQIEGIERIRLGS----LEPGIITEEFAEAISKLP 258 Query: 205 KPVYIAIHA 213 K + H Sbjct: 259 K---MCPHF 264 >gi|304439566|ref|ZP_07399471.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371945|gb|EFM25546.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus duerdenii ATCC BAA-1640] Length = 433 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 20/126 (15%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG--- 151 R +K+ C YC +C G + + E A ++ E++ TG Sbjct: 144 TRSYMKVQDGCNRYCTYCIIPYARGPIRSRTI-EDSVEEAKR--LSEAGYKELVLTGIHI 200 Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 D L +RL +++ + + ++ +R S ++P I + ++ +K GK Sbjct: 201 GSYGKD---LGDERLVDLIEEITKVDGIERIRLSS----IEPITITRDFLERIKATGK-- 251 Query: 208 YIAIHA 213 + H Sbjct: 252 -VCDHF 256 >gi|153938937|ref|YP_001391265.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum F str. Langeland] gi|166217247|sp|A7GEQ5|MOAA_CLOBL RecName: Full=Molybdenum cofactor biosynthesis protein A gi|152934833|gb|ABS40331.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum F str. Langeland] Length = 319 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 70/164 (42%), Gaps = 22/164 (13%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E +V + ++ ++ + + ++ FTGG+PLIL Sbjct: 14 VSVTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 + K++ I ++ + + + ++++ LK+AG + I + Sbjct: 73 KD--IDKLIYNTSKINSIKDIAMTTNAI------LLEDMVEELKKAGLK-RVNISLDSLK 123 Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E + + +I + + G+ + +V++KGINDD Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMKPIKINTVIMKGINDD 167 >gi|148379902|ref|YP_001254443.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A str. ATCC 3502] gi|153932339|ref|YP_001384199.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A str. ATCC 19397] gi|153937083|ref|YP_001387740.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A str. Hall] gi|226949238|ref|YP_002804329.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A2 str. Kyoto] gi|166217245|sp|A7FUZ6|MOAA_CLOB1 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|166217246|sp|A5I365|MOAA_CLOBH RecName: Full=Molybdenum cofactor biosynthesis protein A gi|254811539|sp|C1FPG7|MOAA_CLOBJ RecName: Full=Molybdenum cofactor biosynthesis protein A gi|148289386|emb|CAL83482.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A str. ATCC 3502] gi|152928383|gb|ABS33883.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A str. ATCC 19397] gi|152932997|gb|ABS38496.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A str. Hall] gi|226843612|gb|ACO86278.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A2 str. Kyoto] gi|322806201|emb|CBZ03769.1| molybdenum cofactor biosynthesis protein MoaA [Clostridium botulinum H04402 065] Length = 319 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 70/164 (42%), Gaps = 22/164 (13%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E +V + ++ ++ + + ++ FTGG+PLIL Sbjct: 14 VSVTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 + K++ I ++ + + + ++++ LK+AG + I + Sbjct: 73 KD--IDKLIYNTSKINSIKDIAMTTNAI------LLEDMVEELKKAGLK-RVNISLDSLK 123 Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E + + +I + + G+ + +V++KGINDD Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMKPIKINTVIMKGINDD 167 >gi|326201371|ref|ZP_08191243.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM 2782] gi|325988939|gb|EGD49763.1| RNA modification enzyme, MiaB family [Clostridium papyrosolvens DSM 2782] Length = 436 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 18/128 (14%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF 149 + R LK+ C +C +C + + S+ + + ++ S EV+ Sbjct: 140 KERTRAYLKIQEGCSQFCAYC-----IIPYARGPIRSRKPDDIIEEVRQLADSGFLEVVL 194 Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 TG L L +++ + I ++ +R S ++P I E ++ K Sbjct: 195 TGIHLASYGRELEDTSLLDIIRKIHSIDGIKRIRLGS----IEPTTITKEFVEAAVGLPK 250 Query: 206 PVYIAIHA 213 + H Sbjct: 251 ---LCPHF 255 >gi|154505328|ref|ZP_02042066.1| hypothetical protein RUMGNA_02843 [Ruminococcus gnavus ATCC 29149] gi|153794371|gb|EDN76791.1| hypothetical protein RUMGNA_02843 [Ruminococcus gnavus ATCC 29149] Length = 481 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 70/192 (36%), Gaps = 43/192 (22%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 D+ L+ C C FCF +M + T+ D ++ L+++Q + T Sbjct: 106 DQSLMDEYRSCRNKCMFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YITLT---- 156 Query: 155 LILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIH 212 +S +++++K L I + Q NPEL + L H Sbjct: 157 -NMSDHDVERIVKYRLEPI-------------NISFQTTNPELRCKML-----------H 191 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 F+ EA+ + L I + Q VL KG+ND E+ + PY Sbjct: 192 ----NRFAGEALKKVDILYRGQIEMNGQIVLCKGVNDGEELERTIRDL---TGYLPYLKS 244 Query: 273 HPDLAAGTSHFR 284 + G + +R Sbjct: 245 VSIVPVGLTKYR 256 >gi|152992605|ref|YP_001358326.1| tRNA modifying enzyme [Sulfurovum sp. NBC37-1] gi|151424466|dbj|BAF71969.1| tRNA modifying enzyme [Sulfurovum sp. NBC37-1] Length = 417 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 18/124 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C C +C + + +G S ++ E L I+ + E I TG Sbjct: 135 KSRAFIKIQEGCDFRCSYCI----IPAVRGNARSHRE-ETILEQIRKLAANGFGEFILTG 189 Query: 152 GDPLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + + K+LK + I+ V+ +R S P+ +I+ E ++ L E + Sbjct: 190 TNVGSYGRDHDTSMAKLLKKMSMIRGVRRIRIGSLEPV----QIDDEFMELLSEP----W 241 Query: 209 IAIH 212 +A H Sbjct: 242 MAKH 245 >gi|239627307|ref|ZP_04670338.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239517453|gb|EEQ57319.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 474 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 41/188 (21%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ Y ++ + F G+ + L Sbjct: 85 LMSDYRSCSNKCIFCFIDQMPPGMRDTL-----------YFKDDDS--RLSFLQGNYITL 131 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 ++ + + + +I+R + Q NPEL + L Sbjct: 132 TNMKERDI---------ERIIRMQLAPINISVQTTNPELRCKMLN--------------- 167 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 F+ E + + L + + + Q V K +ND E+ + R P+ + Sbjct: 168 NRFAGEKLKYLQMLYDGHVEMNGQVVCCKNVNDGAELERTMDDL---ARYLPFLRSVSVV 224 Query: 277 AAGTSHFR 284 AG + FR Sbjct: 225 PAGITRFR 232 >gi|15895263|ref|NP_348612.1| molybdenum cofactor biosynthesis protein MoaA [Clostridium acetobutylicum ATCC 824] gi|24212002|sp|Q97HL8|MOAA_CLOAB RecName: Full=Molybdenum cofactor biosynthesis protein A gi|15024974|gb|AAK79952.1|AE007703_7 Molybdenum cofactor biosynthesis enzyme MoaA, Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824] gi|325509409|gb|ADZ21045.1| Molybdenum cofactor biosynthesis enzyme MoaA, Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018] Length = 318 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 80/211 (37%), Gaps = 38/211 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C + Q+ +S D L I +V +TGG+PL+ Sbjct: 14 ISVTDRCNLRCIYCMPKMKGYIQENNKISCSDIFKLLRA-AVSVGINKVRYTGGEPLL-- 70 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA------- 210 ++ + K++ + + + + + PQ + + LK+AG K V I+ Sbjct: 71 NEEISKIIYETSKLPQINDIAITTNGIL-LPQ-----MAKDLKKAGLKRVNISLDTLKSD 124 Query: 211 --IHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIND-DPEILANLMRTF-VELR 265 + + ++ I I + + +VL+KGIND + NL R VE+R Sbjct: 125 TFTKITNFNQITK-VIDGIDTCLKLNLKPVKINTVLIKGINDLEVNDFVNLSREMPVEIR 183 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 + I EG KI Sbjct: 184 ------FIELM---------PIGEGAKIYEK 199 >gi|300856502|ref|YP_003781486.1| putative molybdenum cofactor biosynthesis protein A [Clostridium ljungdahlii DSM 13528] gi|300436617|gb|ADK16384.1| predicted molybdenum cofactor biosynthesis protein A [Clostridium ljungdahlii DSM 13528] Length = 322 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 35/163 (21%), Positives = 72/163 (44%), Gaps = 20/163 (12%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C +E +V G +L +D + I ++ +TGG+PLI+ Sbjct: 14 ISLTDRCNLRCIYCMPKEGIVKRPYGDLLRFEDILKIIKA-AATLGINKIRYTGGEPLIM 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 ++ +++ IK + + + ++ ++ LKEAG K V I++ Sbjct: 73 KD--IEYLIRETANIKGITDVAITTNGILLC------DMADKLKEAGLKRVNISLDTLKA 124 Query: 217 YE---FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 + + + + +I + + G+ + +VLLKG ND Sbjct: 125 DKYKFITRCGNLDAVLKSIDKCLSIGLTPVKINTVLLKGFNDT 167 >gi|116872442|ref|YP_849223.1| molybdenum cofactor biosynthesis protein A [Listeria welshimeri serovar 6b str. SLCC5334] gi|123466165|sp|A0AHG0|MOAA_LISW6 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|116741320|emb|CAK20442.1| molybdenum cofactor biosynthesis protein A [Listeria welshimeri serovar 6b str. SLCC5334] Length = 333 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 40/191 (20%), Positives = 74/191 (38%), Gaps = 23/191 (12%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + + I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFMELMVQF-GIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDDPEILAN 256 V I++ + H F I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDFL 176 Query: 257 LMRTFVELRIK 267 ++ I+ Sbjct: 177 KFTKDKDINIR 187 >gi|297544398|ref|YP_003676700.1| MiaB-like tRNA modifying protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296842173|gb|ADH60689.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 449 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 21/121 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C YC +C + + S++ E L ++ S E++ TG Sbjct: 155 RTRAYVKIQDGCNQYCTYC-----IIPYARGPVRSREPEKILEEVKRFADSGYKEIVLTG 209 Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 D L + L ++K + I ++ +R S P+ E ++ + + Sbjct: 210 IHIASYGKD---LKNIGLLDIIKRIHEIDGIKRIRLSSIEPVFL----TEEFVKEIAKLP 262 Query: 205 K 205 K Sbjct: 263 K 263 >gi|152990825|ref|YP_001356547.1| tRNA modifying enzyme [Nitratiruptor sp. SB155-2] gi|151422686|dbj|BAF70190.1| tRNA modifying enzyme [Nitratiruptor sp. SB155-2] Length = 410 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 47/124 (37%), Gaps = 18/124 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R +K+ C C +C + G+ + L + + + E I TG Sbjct: 129 KSRAFIKIQEGCDFRCSYCIIPYVRGNARSMDESLILEQIQKL-----ASNGFGEFILTG 183 Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + L K+LK + I+ V+ +R S ++P +I E + L E + Sbjct: 184 TNVGSYGKDKDTSLAKLLKKIAMIRGVRRIRLGS----IEPIQITDEFKEILDEP----W 235 Query: 209 IAIH 212 +A H Sbjct: 236 MAKH 239 >gi|251798581|ref|YP_003013312.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. JDR-2] gi|247546207|gb|ACT03226.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. JDR-2] Length = 333 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 38/179 (21%), Positives = 68/179 (37%), Gaps = 33/179 (18%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI------QEK 141 G H Y + + + C + C +C ++G + + +I + Sbjct: 9 GREHDY---LRISVTDRCNLRCLYCM------PEEGMEFADASHLLSYDHIVEVVQTAAE 59 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 I ++ TGG+PLI L +++ L+ I ++ + + ++ + LK Sbjct: 60 LGITKLRITGGEPLIRPD--LDSLIRRLKAIPGIEDIALTTNGMLLGKY------AEALK 111 Query: 202 EAGKP-VYIAIHANHPYEF-----SEEAIAAISRLANAG----IILLSQSVLLKGINDD 250 AG V I++ P F E I + AG + VLLKGIN+D Sbjct: 112 AAGLNRVNISLDTLDPARFKFIARRGELKRVIEGIEAAGRAGLAPIKLNCVLLKGINED 170 >gi|242278011|ref|YP_002990140.1| radical SAM domain protein [Desulfovibrio salexigens DSM 2638] gi|242120905|gb|ACS78601.1| Radical SAM domain protein [Desulfovibrio salexigens DSM 2638] Length = 343 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 43/228 (18%), Positives = 80/228 (35%), Gaps = 50/228 (21%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 L+L VC + C +C+ G + L ++ A+ ++ +I GG+P+ Sbjct: 27 TAELELSRVCDLRCIYCYAS--SGEKLNNELDFEEITDAVDQCRDLGARKIIILGGGEPM 84 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRF-----HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + +++ +RYI H L + RI PE+ L G I Sbjct: 85 LYP-----RIMDVIRYI-HELGLEIELFSNGT--------RITPEIASELYSMGVQPVIK 130 Query: 211 IHANHPYEFSE----------EAIAAISR----LANAG-----IILLSQSVLLKGINDDP 251 N +A AI + L AG I + +Q+++ + + Sbjct: 131 --FN---SLDPQIQDMLAGKKDAHKAIRQGLNNLLEAGYSKGDIPIGAQTIICRQ---NY 182 Query: 252 EILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTI--EEGQKIVASL 297 + + R +I PY+ D H L + E+ ++ L Sbjct: 183 AEIPEMWRWLRTRKIIPYFETITDQGRAKDHMELALNPEQIGELFDEL 230 >gi|91203193|emb|CAJ72832.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 447 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 60/168 (35%), Gaps = 22/168 (13%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 +DP Q L ++D I N S G R LK+ C +YC +C Sbjct: 118 DDPCIPQITSLPPYLLQNNTFQKDSIYRLNISRFHG-----HTRAFLKIEDGCDMYCSYC 172 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI----LSHKR-LQKV 165 + + S+ + + + E++ TG +S L K+ Sbjct: 173 -----IIPYVRGAIKSRKWQDIHDEAKRLIHNGYKEIVLTGIHLGAYGKEMSDGISLVKI 227 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 L+ L + +R S + + + I PEL+ + E K + +H Sbjct: 228 LERLSEFSGLGRIRL-SSIEVNE---ITPELMHLIAE-RKTICPHLHI 270 >gi|29840033|ref|NP_829139.1| MiaB-like tRNA modifying enzyme [Chlamydophila caviae GPIC] gi|29834380|gb|AAP05017.1| MiaB-like tRNA modifying enzyme [Chlamydophila caviae GPIC] Length = 421 Score = 48.9 bits (116), Expect = 0.001, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 17/126 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R +K+ C +C +C + G + S+ + L I EV+ G Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSR-----SRPIQEILDEISGLVSQGYQEVVIAG 188 Query: 152 GDPLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + + L +++ + IK ++ +R S +DP+ + +L L Sbjct: 189 INVGDYQDEGKSLAHLIRQVDEIKGIERIRISS----IDPEDVQEDLRDVLLSGRHTC-- 242 Query: 210 AIHANH 215 H++H Sbjct: 243 --HSSH 246 >gi|302670902|ref|YP_003830862.1| Fe-S oxidoreductase [Butyrivibrio proteoclasticus B316] gi|302395375|gb|ADL34280.1| Fe-S oxidoreductase [Butyrivibrio proteoclasticus B316] Length = 458 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 38/155 (24%), Positives = 59/155 (38%), Gaps = 40/155 (25%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q V T + Sbjct: 90 LMDDYRSCSNKCIFCFIDQMPKGMRKTLYFKDD-DSRLSFLQGN----YVTLT-----NM 139 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 S K + ++LK +H + Q NPEL + L Sbjct: 140 SDKDIDRILK------------YHLSPINISFQTTNPELRCKMLG--------------- 172 Query: 217 YEFSEEAIAAISRLAN--AGIILLSQSVLLKGIND 249 F+ EA+ + RL GI + Q VL KG+ND Sbjct: 173 NRFAGEALKKVDRLCAPGTGIEINGQIVLCKGVND 207 >gi|193212999|ref|YP_001998952.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum NCIB 8327] gi|193086476|gb|ACF11752.1| molybdenum cofactor biosynthesis protein A [Chlorobaculum parvum NCIB 8327] Length = 333 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 73/163 (44%), Gaps = 13/163 (7%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 D + + + C + C +C + E +K L + T A + + + I +V FTGG+P Sbjct: 21 DYVRIAVTSACNLRCTYCLKNEEDADRKIDQLDADQTVAVIEVLAQM-GIRKVRFTGGEP 79 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-HA 213 L+ + ++++ + + ++F + ++ R ELI + G + + A Sbjct: 80 LLHPD--IVELVRRAKATPGIDTVKFTTNGILL--DRYLDELIAAGLD-GINLSLDTLDA 134 Query: 214 NHPYEFS-----EEAIAAISRLAN-AGIILLSQSVLLKGINDD 250 + + AA+ RL + + + +++L+GIN+D Sbjct: 135 QKYRDITRRDRFASVRAALDRLLDIPDMSVKINTLMLRGINND 177 >gi|289550128|ref|YP_003471032.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus lugdunensis HKU09-01] gi|315659242|ref|ZP_07912106.1| molybdenum cofactor biosynthesis protein A [Staphylococcus lugdunensis M23590] gi|289179660|gb|ADC86905.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus lugdunensis HKU09-01] gi|315495667|gb|EFU83998.1| molybdenum cofactor biosynthesis protein A [Staphylococcus lugdunensis M23590] Length = 340 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 63/175 (36%), Gaps = 40/175 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G K +L+ ++ E +A I + + ++ TGG+ Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDFVFLPKDELLTFEEIER-IAEIYAELGVKKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPEL 196 PL+ + L +++ L I+ ++ + R V I+ + Sbjct: 77 PLL--RRNLYQLIARLNKIEGIEDIGLTTNGLLLKKHGLKLFEAGLRRINVSLDAIDNSV 134 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGINDD 250 Q + E I I+ G + V+ KG+NDD Sbjct: 135 FQAINNRN--------------IKAETILDQINYAIAIGFHVKVNVVIQKGVNDD 175 >gi|194016213|ref|ZP_03054827.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus ATCC 7061] gi|194011686|gb|EDW21254.1| molybdenum cofactor biosynthesis protein A [Bacillus pumilus ATCC 7061] Length = 305 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 24/142 (16%) Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 K +LS ++ E + + ++ TGG+PL+ L +++ L I ++ + Sbjct: 14 NKEELLSFEEIEQLATLFAKDLGVVKIRITGGEPLMRKD--LPILIEKLSKIPGIEDIAM 71 Query: 181 ---HSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPYEFS---------EEAIAAI 227 + +P+ + LK+AG V I++ + +P F ++ I Sbjct: 72 TTNGTLLPVY---------AEKLKKAGLQRVTISLDSLNPDRFKQMNGRNISIQKVFDGI 122 Query: 228 SRLANAGIILLSQSVLLKGIND 249 AG+ + V+ KG+ND Sbjct: 123 EAAKKAGLAIKINMVVQKGVND 144 >gi|289550653|ref|YP_003471557.1| MiaB family protein [Staphylococcus lugdunensis HKU09-01] gi|289180185|gb|ADC87430.1| MiaB family protein [Staphylococcus lugdunensis HKU09-01] Length = 448 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + + E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKKVVEQATTLV--NAGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L I ++ +R S ++ ++ E+I ++++ K Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLETIDGLERIRISS----IEASQLTDEVIDVIEKSNK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|291549892|emb|CBL26154.1| MiaB-like tRNA modifying enzyme [Ruminococcus torques L2-14] Length = 450 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 22/131 (16%), Positives = 47/131 (35%), Gaps = 27/131 (20%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C +C +C + + S+ E L ++ + EV+ TG Sbjct: 162 HTRAYIKVQDGCNQFCTYC-----IIPYARGRVRSRSMEDVLDEVRTLADNGYKEVVLTG 216 Query: 152 G---------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 D L ++++ + I ++ +R S ++P I E + + + Sbjct: 217 IHLSSYGIDFD----KEYHLLELIRAVHEIDGIERIRLGS----LEPGIITEEFAEGIAK 268 Query: 203 AGKPVYIAIHA 213 K + H Sbjct: 269 LPK---MCPHF 276 >gi|237807379|ref|YP_002891819.1| nitrogenase cofactor biosynthesis protein NifB [Tolumonas auensis DSM 9187] gi|237499640|gb|ACQ92233.1| nitrogenase cofactor biosynthesis protein NifB [Tolumonas auensis DSM 9187] Length = 476 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 49/258 (18%), Positives = 93/258 (36%), Gaps = 49/258 (18%) Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQE 140 H+Y R+ L + C V C +C R+ G + + + A A Sbjct: 46 PSAHHKYA-RMHLAVAPACNVQCHYCNRKYDCSNESRPGVVSELLNVEQALQKARAVAAA 104 Query: 141 KSQIWEVIFTG-GDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQ 198 Q+ + G GDPL + L+ LR + V++ + PQ ++ L++ Sbjct: 105 IPQLSVIGIAGPGDPLANQTRTFDT-LEGLRSALPDVKLC-VSTNGLA-LPQSVDS-LVE 160 Query: 199 CLKEAGKPVYIA---IHANH------------------PYEFSEEAIAAISRLANAGIIL 237 L + + H + ++ I + +L G+++ Sbjct: 161 -LGVDHVTITMNAIDAHVSAGIYDWIYFDGVRYRGKEGAQILIDQQIEGMRKLMENGVLV 219 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE--G 290 SVL+ G+ND L+ + ++ I P GT H+ L+ + Sbjct: 220 KINSVLIPGVND--LHLSEVSHAIRDMGAFLHNIMPL---ISKPEHGT-HYGLSGQREPT 273 Query: 291 QKIVASLKEKISGLCQPF 308 + VA ++E+ SG+ P Sbjct: 274 PEEVAQVRER-SGVFMPQ 290 >gi|262039459|ref|ZP_06012763.1| protein YqeV [Leptotrichia goodfellowii F0264] gi|261746526|gb|EEY34061.1| protein YqeV [Leptotrichia goodfellowii F0264] Length = 453 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 60/149 (40%), Gaps = 14/149 (9%) Query: 72 EEREDPI-GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 + D I + +S K + R R +K+ C +C +C G + +++ Sbjct: 134 HYQVDNIFDEKEYSSNKYTILREKARAFVKIQDGCSKFCSYCKIPYARGLSRSR--ATEH 191 Query: 131 TEAALAYIQEKSQIWEVIFTGGD----PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVP 185 + Y+ E+ EV+ TG + L L K +L+ + +K V+ +R S Sbjct: 192 VLEEINYLGEQ-GYKEVVLTGINMSEYGLDLEPKTDFDTLLEKILAVKSVERVRVSS--- 247 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHAN 214 V P I + + LK K + +H + Sbjct: 248 -VYPDTITDKFLGMLKNNPK-LMPHLHVS 274 >gi|253574226|ref|ZP_04851568.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. oral taxon 786 str. D14] gi|251846703|gb|EES74709.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. oral taxon 786 str. D14] Length = 335 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 22/171 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIF 149 R D + + + C + C +C E MV ++S ++ ++ + + ++ Sbjct: 10 RKHDYLRISVTDRCNLRCVYCMPAEGMVFQPHEEIMSYEEIAETVSAL--TPMGLRKIRL 67 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208 TGG+PL+ L++++ L I ++ + + + + LK+AG K V Sbjct: 68 TGGEPLVRKD--LEQLVAMLSSIPGIEDIALTTNG------MFLAKKAELLKQAGLKRVN 119 Query: 209 IAIHANHPYEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDD 250 I++ + F+ I G + VL+KGIN+D Sbjct: 120 ISLDSLRQDRFAMITRGGEVEKVLEGIQAAVEVGFEPIKLNVVLMKGINED 170 >gi|193214740|ref|YP_001995939.1| nitrogenase cofactor biosynthesis protein NifB [Chloroherpeton thalassium ATCC 35110] gi|193088217|gb|ACF13492.1| nitrogenase cofactor biosynthesis protein NifB [Chloroherpeton thalassium ATCC 35110] Length = 423 Score = 48.6 bits (115), Expect = 0.001, Method: Composition-based stats. Identities = 42/218 (19%), Positives = 73/218 (33%), Gaps = 57/218 (26%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE----KSQIWEVI 148 RI L + C + C FC R+ ++ ++SK E A+ Y+ I V Sbjct: 20 GRIHLPVAPKCNIQCNFCNRKFDCLNENRPGVTSKVLSPEQAVHYLGNALEISPNIAVVG 79 Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILR---------FHSRVPIVDPQRINPELIQ 198 G GDP + +K ++++R + V P EL + Sbjct: 80 IAGPGDPFANPDET----------MKTLRLVREKYPEMLLCVATNGLNVLPY--IDELAE 127 Query: 199 CLKEAGKPVYIAI-----------HANHPYEF--SEEAIA--------AISRLANAGIIL 237 L+ + + I H E+A A+ +L GI Sbjct: 128 -LQVSHVTITINAVSPKVGAEVYAWVRHQKRVLRDEQAAETLLENQLAALKKLKEKGITA 186 Query: 238 LSQSVLLKGINDD-----PEILANLMRTFVELRIKPYY 270 ++++ GIND + ++ L + PYY Sbjct: 187 KVNTIIIPGINDHHVLEVAKTVSELGADILNT--LPYY 222 >gi|313888926|ref|ZP_07822586.1| tRNA methylthiotransferase YqeV [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845099|gb|EFR32500.1| tRNA methylthiotransferase YqeV [Peptoniphilus harei ACS-146-V-Sch2b] Length = 432 Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 48/126 (38%), Gaps = 18/126 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C +C +C + + S+ E ++ + E++ TG Sbjct: 143 RTRAYMKVQDGCNRFCTYC-----IIPFARGPIRSRTIEDSVREARTLADRGFKEIVLTG 197 Query: 152 GD----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + L RL +++ + + ++ +R S V+P I + ++ + GK Sbjct: 198 IHIGSFGMDLGDMRLIDLIEAIAEVDGIERIRLSS----VEPIIITDDFMERAVKTGK-- 251 Query: 208 YIAIHA 213 + H Sbjct: 252 -LCDHF 256 >gi|307570581|emb|CAR83760.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes L99] Length = 333 Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 75/174 (43%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116 Query: 206 PVYI---AIHANHPYEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDD 250 V I ++HA+H + ++ + I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHADHFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170 >gi|313669401|ref|YP_004049828.1| GTP cyclohydrolase subunit MoaA [Sulfuricurvum kujiense DSM 16994] gi|313156598|gb|ADR35275.1| GTP cyclohydrolase subunit MoaA [Sulfuricurvum kujiense DSM 16994] Length = 321 Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 38/167 (22%), Positives = 67/167 (40%), Gaps = 29/167 (17%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C CR+C + K +LS ++ A + I + I ++ TGG+P Sbjct: 15 VSVTERCNFRCRYCMAEKPFSWVPKENLLSYEELFAFIK-IGIDNGIQKIRLTGGEP--T 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-----PELIQCLKEAG-KPVYIAI 211 + + L +++ HS P VD P L LK+AG + V I++ Sbjct: 72 TRENLDELIAM-----------IHSYAPDVDIGLTTNGYLLPSLAHKLKKAGLRRVNISL 120 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + E + I AG+ + SV+L+ IN++ Sbjct: 121 DSLDRNTLHYIAQKDVLPEILQGIEAAVEAGLSVKINSVILRNINEN 167 >gi|329731179|gb|EGG67549.1| molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis VCU144] gi|329735413|gb|EGG71704.1| molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis VCU028] Length = 340 Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 69/174 (39%), Gaps = 38/174 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+ Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDYTFLPKNELLTFEELTR-ISKIYAQLGVKKIRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ + L K+++ L I ++ + + LK+ GK +Y Sbjct: 77 PLL--RRNLYKLVEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLYQAGLR 121 Query: 209 -IAIHA-----NHPYEFSEEAIAAISRL------ANAGIILLSQSVLLKGINDD 250 I + N E + I A + L + G + V+ KG+NDD Sbjct: 122 RINVSLDAIEDNVFQEINNRNIKASTILEQIDYAVSIGFEVKVNVVIQKGVNDD 175 >gi|150015722|ref|YP_001307976.1| MiaB-like tRNA modifying enzyme [Clostridium beijerinckii NCIMB 8052] gi|149902187|gb|ABR33020.1| MiaB-like tRNA modifying enzyme [Clostridium beijerinckii NCIMB 8052] Length = 432 Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 20/121 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFT- 150 R LK+ C +C +C SKD + L I+ S+ E+I + Sbjct: 139 KTRAFLKIQDGCNRFCAYCLI-----PYTRGTTCSKDPQKVLDEIKNLSEHGFKEIILSG 193 Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G D + + L +L+ + + ++ +R S ++P E+I+ +K+ Sbjct: 194 IHTASYGVD--LDGNVTLITLLEEIEKLDGIERVRIGS----IEPSFFTDEVIEKMKKMK 247 Query: 205 K 205 K Sbjct: 248 K 248 >gi|119356568|ref|YP_911212.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeobacteroides DSM 266] gi|119353917|gb|ABL64788.1| GTP cyclohydrolase subunit MoaA [Chlorobium phaeobacteroides DSM 266] Length = 333 Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 17/180 (9%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R+ + + + C + C +C R + LSS++ + + I ++ F Sbjct: 16 QRHIEYARIAVTAHCNLRCTYCMREEHEYHTIADPELSSREVGKIIVALAS-IGIKKIRF 74 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC--------LK 201 TGG+PL+ + +++ + I ++ + + ++ R ELI L Sbjct: 75 TGGEPLLRKD--ISVLVRQAKSIAGIKTVSLTTNGILL--DRHLDELIDAGLDAINLSLD 130 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRT 260 + Y+A EF + LA A + V+++G+N D+ + L RT Sbjct: 131 TLDRERYLA--ITRRNEFDRVMSNLETLLAKATFPVKLNVVMMRGVNGDEIKDFIELTRT 188 >gi|332830635|gb|EGK03241.1| nitrogenase cofactor biosynthesis protein NifB [Dysgonomonas gadei ATCC BAA-286] Length = 420 Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 49/267 (18%), Positives = 86/267 (32%), Gaps = 80/267 (29%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEK----SQI 144 H+Y R+ L + C + C +C R+ ++ ++S ++ Y++ I Sbjct: 16 HKYA-RVHLPVAPKCNIQCNYCNRKYDCCNESRPGVTSTILSPLQSVHYMKALSEKIPNI 74 Query: 145 WEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 V G GDP + + L Q +R Q+ P+LI CL Sbjct: 75 SVVGIAGPGDPFANAEETL-------------QTMRLA--------QKEFPDLIFCLSSN 113 Query: 204 GKPVYI---------AIHAN-HPYEFSEEAIAAI-------------------------- 227 G + H + E +A I Sbjct: 114 GLDLAPYIDEIAEIGVSHVTITVNSLNPETLAKIYRWVRYKRRVYRGEEGAKVLLEQQLY 173 Query: 228 --SRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGT 280 +L I + +V+ GIND + +L + EL P Y T Sbjct: 174 CIQKLKEKNITVKINTVICPGIND--HEIEDLAKKVAELGADTMNCIPMY-----PTENT 226 Query: 281 SHFRLTIEEGQKIVASLKEKISGLCQP 307 F + E ++++ +K +IS +P Sbjct: 227 E-FEILKEPSKEMMKDIKARISKYIKP 252 >gi|312376680|gb|EFR23697.1| hypothetical protein AND_12429 [Anopheles darlingi] Length = 708 Score = 48.6 bits (115), Expect = 0.002, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 33/176 (18%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R+ + + L C + C++C E V +QK +L+S++ + ++ T Sbjct: 183 RFHTYLRISLTERCNLRCKYCMPAEGVQLTQKDKLLTSEEVIRLANLFVA-EGVRKIRLT 241 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P + L +++ L+ I +++ + + + + +L+ L AG + Sbjct: 242 GGEPTVRKD--LPEIVSQLKAIPNLESVGITTNGLM-----LTRQLV-GLHRAGLD-ALN 292 Query: 211 IHANHPYEFSEEAIAAISRLAN--------AGIILLSQ--------SVLLKGINDD 250 + +A ++ AGI L SQ VL+KG NDD Sbjct: 293 V------SLDTLKVARYEQITRRKGWERVIAGIDLASQLGYRPKVNCVLMKGFNDD 342 >gi|115360432|ref|YP_777569.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria AMMD] gi|115285760|gb|ABI91235.1| GTP cyclohydrolase subunit MoaA [Burkholderia ambifaria AMMD] Length = 372 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 50/248 (20%), Positives = 91/248 (36%), Gaps = 61/248 (24%) Query: 85 PLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE-- 140 PL + P R L L ++ C C +C R+ G + SS+ A L I Sbjct: 31 PLDTLAR--PLRDLRLSVIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAF 88 Query: 141 -KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-----KHVQI---------------LR 179 + ++ TGG+PL+ + L+ +++ L + K V+I LR Sbjct: 89 ISLGVEKIRLTGGEPLL--RRNLEALIERLATLTTLDGKPVEIALTTNGSLLAAKARSLR 146 Query: 180 FH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-II 236 SRV + I+ + + + +A PV + A I AG Sbjct: 147 DAGLSRVTVSL-DAIDDAVFRRMSDADVPVARVL-------------AGIEAAQAAGLAP 192 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIE 288 + +V+ +G+NDD + L+R F + Y G S + + Sbjct: 193 VKVNAVIERGVNDD--QILPLVRHFRHSGVAVRFIEY-----MDVGGASAWSGDKVVPAT 245 Query: 289 EGQKIVAS 296 ++++ + Sbjct: 246 RMRELIEA 253 >gi|308070127|ref|YP_003871732.1| molybdenum cofactor biosynthesis protein A [Paenibacillus polymyxa E681] gi|305859406|gb|ADM71194.1| Molybdenum cofactor biosynthesis protein A [Paenibacillus polymyxa E681] Length = 338 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 57/175 (32%), Gaps = 40/175 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G + LS ++ + ++ TGG+ Sbjct: 19 ISVTDRCNFRCSYCMPKEIFGDDYAFLPQNECLSFEEIHRLTKLFVS-LGVKKIRLTGGE 77 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPEL 196 PL+ + L ++ + I V+ + R V + PEL Sbjct: 78 PLM--RRNLPDLVSQILSIDGVEDIGLTTNGVLLGQQAKPLYDAGLRRLNVSLDALAPEL 135 Query: 197 IQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 L G KP +I + E G + V+ KG+ND Sbjct: 136 FGRLNGRGIKPDFILKQIEYAREI--------------GFEIKVNMVVQKGVNDS 176 >gi|256371930|ref|YP_003109754.1| Radical SAM domain protein [Acidimicrobium ferrooxidans DSM 10331] gi|256008514|gb|ACU54081.1| Radical SAM domain protein [Acidimicrobium ferrooxidans DSM 10331] Length = 375 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 71/179 (39%), Gaps = 22/179 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGG 152 P +L + CP+ C C R + + L++ + A + + + VI FTGG Sbjct: 18 PRLVLWETTQACPLACVHC-RANAISTPDPDELTTAEGFALIDDLAAVAGPRPVIVFTGG 76 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 DPL L + HV + P V +RI P + L +AG I+I Sbjct: 77 DPLS-RPDLLDLIAHAAARGLHVAV------SPAVS-ERITPATLTALYDAGAR-AISIS 127 Query: 213 A-----NH--PYEFSEEA---IAAISRLANAGIIL-LSQSVLLKGINDDPEILANLMRT 260 NH A + A++ + G+ + ++ +V+ +ND P + ++ Sbjct: 128 LDGLGRNHDATRRVPGHALRTLEALTMARSVGLRVQVNTTVMRTTVNDLPAVAEAMLAR 186 >gi|256827121|ref|YP_003151080.1| Fe-S oxidoreductase [Cryptobacterium curtum DSM 15641] gi|256583264|gb|ACU94398.1| Fe-S oxidoreductase [Cryptobacterium curtum DSM 15641] Length = 455 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 37/179 (20%), Positives = 64/179 (35%), Gaps = 42/179 (23%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 + + + C C FCF + + L+ +D + L+++Q V FT Sbjct: 80 SKAIFDEVIQCRNACMFCF-MRQLPDDVRSSLTLRDDDFRLSFLQG----TFVTFT---- 130 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+ ++++ H+ LR+ + PE+ + + V I Sbjct: 131 -NLTPADEARIIEQ-----HISPLRYSLHA-------VTPEVRRRMIGPRASVGI----- 172 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM-----RTFVELRIKP 268 A RL AGI L +Q VL+ G+ND E+ L + I P Sbjct: 173 ----------EAAERLLQAGIELHAQIVLMPGVNDGAELAQTLSWAWKHEGIRSVGIVP 221 >gi|219668949|ref|YP_002459384.1| radical SAM protein [Desulfitobacterium hafniense DCB-2] gi|219539209|gb|ACL20948.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2] Length = 440 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 12/174 (6%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 + + + +C C FCF + T +++ ++ + TGG+P Sbjct: 89 GTVTMYVSLMCHRNCYFCFNPNQEDYEHFTHNKRDLVSELTQHLKHGPKLTHLALTGGEP 148 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA 213 L+ + L L K + H+R ++ E++Q LK+AG + +I Sbjct: 149 LLHKKEMLDFF--RLAKEKSPKT---HTR-LYTSGDFLDREILQDLKDAGLSEIRFSIKM 202 Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRI 266 P +E I+ L+ I ++ + +L G + ++ + I Sbjct: 203 EDPERLKQEVYERIA-LSKEFIPDVMVEMPVLPG---SFAEMKEVLLELDRIGI 252 >gi|89894518|ref|YP_518005.1| hypothetical protein DSY1772 [Desulfitobacterium hafniense Y51] gi|89333966|dbj|BAE83561.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 440 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 65/174 (37%), Gaps = 12/174 (6%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 + + + +C C FCF + T +++ ++ + TGG+P Sbjct: 89 GTVTMYVSLMCHRNCYFCFNPNQEDYEHFTHNKRDLVSELTQHLKHGPKLTHLALTGGEP 148 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA 213 L+ + L L K + H+R ++ E++Q LK+AG + +I Sbjct: 149 LLHKKEMLDFF--RLAKEKSPKT---HTR-LYTSGDFLDREILQDLKDAGLSEIRFSIKM 202 Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRI 266 P +E I+ L+ I ++ + +L G + ++ + I Sbjct: 203 EDPERLKQEVYERIA-LSKEFIPDVMVEMPVLPG---SFAEMKEVLLELDRIGI 252 >gi|315649901|ref|ZP_07902983.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex V453] gi|315274700|gb|EFU38082.1| molybdenum cofactor biosynthesis protein A [Paenibacillus vortex V453] Length = 334 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E M ++S ++ A L + + + Sbjct: 10 GRVHDY---IRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAILRVLAPM-GVSK 65 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ L+ +++ + I+ +Q + + + P + LKEAG Sbjct: 66 VRLTGGEPLVRKD--LENLVRMIASIEGIQDISLTTNGI------MLPSKARLLKEAGLT 117 Query: 206 --PVYI-AIHANHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 + + ++H + + + I AG+ + VL+KG N+D Sbjct: 118 RINISLDSLHEERYARITRGGHVSKVLEGIEAAYEAGLDPIKLNMVLMKGFNED 171 >gi|92112102|gb|ABE73736.1| putative Fe-S oxidoreductase [Azoarcus communis] Length = 359 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 28/166 (16%) Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVI 148 D ++L + C C FC EM + + + + + L I+ + + V Sbjct: 81 DSLILPVTDGCSWNKCTFC---EMYTAPQKAFRARGE-DEVLESIRRTGERYGNQVRRVF 136 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQCLKEAGKPV 207 GD L+L +RL L+ +R +H+ + R S + R ++ L EAG + Sbjct: 137 LADGDALVLPTRRLLSYLEAIR--EHLPAVHRVSSYCLARNLARKTVAELRTLAEAGLKL 194 Query: 208 Y----------IAIHANHPYEFSEEAIAAISRLANAGI----ILLS 239 + N E E AA+ +L AGI ++L+ Sbjct: 195 AYLGAESGDDEVLARVN-KGETFESTRAALDKLGEAGISRSVMILN 239 >gi|300817404|ref|ZP_07097621.1| radical SAM domain protein [Escherichia coli MS 107-1] gi|300530030|gb|EFK51092.1| radical SAM domain protein [Escherichia coli MS 107-1] Length = 372 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 14/126 (11%) Query: 95 DRILLKLLHVCPVYCRFCFRREMV---GSQKGTVLSSKDTEAALAYIQEKSQIWE----V 147 D IL+K C + C +C+ + ++ E + I E S + E + Sbjct: 3 DTILIKTASRCNLDCTYCYVYRGADTSWQDQPYRMNDATIEKVVERITEYSLLQETGFAI 62 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQI--LRFHSRVPIVDPQRINPELIQCLKEAGK 205 + GG+PL+L +RL+ +L LR + + Q + + + I +++ + Sbjct: 63 VLHGGEPLLLGERRLESLLSGLRRVLNPQKYPISIQTNGVL-----ITEKILNLCSKYRV 117 Query: 206 PVYIAI 211 + ++I Sbjct: 118 SISVSI 123 >gi|218886327|ref|YP_002435648.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218757281|gb|ACL08180.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 361 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 17/161 (10%) Query: 99 LKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 L + C + C +C+ + VL ++ + + + + +V TGG+P Sbjct: 25 LSVTDRCNLRCSYCWGCSEMRFI--PHDDVLRYEEMARIVD-VAVEEGVEKVRLTGGEPF 81 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI---- 211 + K L L L +R + ++ P ++ L + + + Sbjct: 82 V--RKGLTGFLDMLHRRHPALDIRITTNGTLLAPH---AAALRGLGVSTVNISLDTFRRD 136 Query: 212 --HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 A + + + I +AG+ + +V LKG+NDD Sbjct: 137 RFAATTGRDMLPQVLEGIHAALDAGLAVKINAVALKGVNDD 177 >gi|222529567|ref|YP_002573449.1| radical SAM domain-containing protein [Caldicellulosiruptor bescii DSM 6725] gi|222456414|gb|ACM60676.1| Radical SAM domain protein [Caldicellulosiruptor bescii DSM 6725] Length = 429 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 72/167 (43%), Gaps = 25/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C +YC+ C+ + + + LS + A+ ++ + ++I +GG+P + + Sbjct: 91 LHYTNKCNLYCKGCYSYDQNRNDESQDLSMEYFLEAVKQLKTY-GLDKIIISGGEPTLRN 149 Query: 159 H-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 K LK + I ++ ++ + +P L+ ++E V ++I Sbjct: 150 DLDEFIKYLKEILDINYIVLITNGTNLP--------HNLLHTIREYVDDVAVSI------ 195 Query: 218 EFSEEAIAAISRLANAGI--ILLSQSVLLK--GINDDPEILANLMRT 260 + I+ + GI I+++ LLK GIN ++A L R Sbjct: 196 ---DGYEEGITFIRPTGIHKIVMNNIALLKEAGIN--VSMIATLHRK 237 >gi|84497391|ref|ZP_00996213.1| hypothetical protein JNB_14393 [Janibacter sp. HTCC2649] gi|84382279|gb|EAP98161.1| hypothetical protein JNB_14393 [Janibacter sp. HTCC2649] Length = 515 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 45/194 (23%), Positives = 84/194 (43%), Gaps = 36/194 (18%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 P+ L + ++ +L LL C + C CF + S E LA Sbjct: 91 PVPSAYEDGLPQMQTQHTCILLEDLLDHCNLKCPTCF-----AESSPALASVAPLEQVLA 145 Query: 137 YI-----QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 I +E +I ++ +GG+P++ +L+++L+ + V+IL ++ R Sbjct: 146 SIDTRLSRENGRIDVLMLSGGEPMLYP--QLEELLEAVIARPIVRIL-INTNGL-----R 197 Query: 192 I--NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA------------AISRLANAGI-I 236 + + EL+ L+ + V + + + E +E +IA AI RL+ AG+ Sbjct: 198 VAQDDELVALLRRHRERVEVYLQYD--GESAEASIAHRGADIRRFKERAIERLSAAGVFT 255 Query: 237 LLSQSVLLKGINDD 250 L+ + L G+NDD Sbjct: 256 TLTMTASL-GVNDD 268 >gi|145220155|ref|YP_001130864.1| nitrogenase cofactor biosynthesis protein NifB [Prosthecochloris vibrioformis DSM 265] gi|145206319|gb|ABP37362.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium phaeovibrioides DSM 265] Length = 420 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 40/216 (18%), Positives = 73/216 (33%), Gaps = 53/216 (24%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQE----KSQIWEVI 148 RI L + C + C +C R+ ++ +SSK AL Y++ I V Sbjct: 20 GRIHLPVAPKCNIQCNYCNRKFDCMNENRPGVSSKLLSPGQALHYLKAAVELSPNISVVG 79 Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILR---------FHSRVPIVDPQRINPELIQ 198 G GDP + ++ ++++R + + P EL + Sbjct: 80 IAGPGDPFANPDET----------METLRLVRKEYPEMLLCVATNGLNLLPY--IDELAE 127 Query: 199 CLKEAGKPVYIAI-----------HANHPYEFSEEAIAA----------ISRLANAGIIL 237 L+ + + I H + + AA + L GI Sbjct: 128 -LEVSHVTITINAIDPAVGAEIYAWVRHEKKMHRDIEAAELLIGKQLEGLKELKARGITA 186 Query: 238 LSQSVLLKGIND-DPEILANLMRTFVE--LRIKPYY 270 ++++ G+ND E +A + + L PYY Sbjct: 187 KVNTIIIPGVNDHHVETVARTVASLGADILNCLPYY 222 >gi|307721185|ref|YP_003892325.1| MiaB-like tRNA modifying enzyme [Sulfurimonas autotrophica DSM 16294] gi|306979278|gb|ADN09313.1| MiaB-like tRNA modifying enzyme [Sulfurimonas autotrophica DSM 16294] Length = 424 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 10/125 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C + G + +A + E I TG + Sbjct: 142 KSRAFIKIQEGCNFRCSYCIIPYVRGD--ARSMDENRILEQVARLAIN-GFGEFILTGTN 198 Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 L K++K + I+ V+ +R S V+P +I E + L E ++ Sbjct: 199 VGSYGQDTKTSLAKLMKKMSQIRGVRRIRLGS----VEPIQITDEFKEILDEPWMEKHMH 254 Query: 211 IHANH 215 I H Sbjct: 255 IALQH 259 >gi|317052447|ref|YP_004113563.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Desulfurispirillum indicum S5] gi|316947531|gb|ADU67007.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Desulfurispirillum indicum S5] Length = 236 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 11/102 (10%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 H C + CR+C +V Q G + L YI QI V TGG+PL + Sbjct: 29 THGCNLRCRYCHNPALVLGQPG----RSRQDQLLEYIDRH-QIGAVAITGGEPLF--QRE 81 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 L+ +L+ LR + +R P R+ L Q L + Sbjct: 82 LETLLQQLRS----RKIRIKLDTNGTLPHRLKQVLEQELVDF 119 >gi|89898549|ref|YP_515659.1| hypothetical protein CF0742 [Chlamydophila felis Fe/C-56] gi|89331921|dbj|BAE81514.1| conserved hypothetical protein [Chlamydophila felis Fe/C-56] Length = 421 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 51/124 (41%), Gaps = 13/124 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C +C +C + G + + + + E + + EV+ G + Sbjct: 134 KSRAFIKVQDGCNSFCSYCIIPYLRGRSR-SRPAREVLEEISGIVSQ--GYREVVIAGIN 190 Query: 154 PLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + L +++ + I+ ++ +R S +DP+ + +L L +GK Sbjct: 191 VGDYQDEGHSLAHLIRRVDEIEGIERIRISS----IDPEDVQEDLRDVLL-SGKHTC--- 242 Query: 212 HANH 215 H++H Sbjct: 243 HSSH 246 >gi|297621456|ref|YP_003709593.1| MiaB-like tRNA modifying enzyme [Waddlia chondrophila WSU 86-1044] gi|297376758|gb|ADI38588.1| MiaB-like tRNA modifying enzyme [Waddlia chondrophila WSU 86-1044] Length = 433 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 53/127 (41%), Gaps = 15/127 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152 R +K+ C +C +C + G + + + E I E++ TG Sbjct: 137 HTRAFVKVQDGCNSFCTYCIIPYVRGRSRSRTMG-QVLEEVKDLIAN--GYKEIVLTGIN 193 Query: 153 ----DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL---KEAGK 205 D +RL +++K + + ++ LR S +DP ++ E+++ + K+ + Sbjct: 194 IGDFDGGADEPRRLAELVKEVDAVPGLERLRVSS----IDPDEVDDEMLETIINGKKTCR 249 Query: 206 PVYIAIH 212 ++I + Sbjct: 250 SMHIVLQ 256 >gi|291522742|emb|CBK81035.1| MiaB-like tRNA modifying enzyme [Coprococcus catus GD/7] Length = 454 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 51/159 (32%), Gaps = 24/159 (15%) Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q+I D + + + R +K+ C +C +C Sbjct: 112 QYIQDNRHTEDRDAYVADIAHSHEYETMHIETVSEHTRAYIKIQDGCNQFCSYCIIPYAR 171 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-----------------GDPLILSHKR 161 G + + +D + + E++ TG D + + Sbjct: 172 GRVRSRKM--EDILQEVRNLTAN-GYKEIVLTGIHISSYGLDFEHTADEQEDYVPFKNSA 228 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 L +++ L I+ ++ +R S ++P+ I ++ L Sbjct: 229 LIDLIEALSGIEGLERIRLGS----LEPRIITENFVRRL 263 >gi|254478005|ref|ZP_05091389.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653] gi|214036009|gb|EEB76699.1| radical SAM domain protein [Carboxydibrachium pacificum DSM 12653] Length = 292 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 13/118 (11%) Query: 96 RIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R+L L + C + C +C +K +L +D E + + + + E++ TGG+P Sbjct: 3 RVLGLIVTSDCNLRCSYCDYSNKRRDKKSNLLV-EDVERFILAMSDYMNLGEIMITGGEP 61 Query: 155 LILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 +LS+ ++ + T++ ++ IL + I+ E I+ LK+ V+I+I Sbjct: 62 FLLSN--IEYWILTMKKYSPNISILTNGT--------LIDSEQIRWLKKHSVTVHISI 109 >gi|332157839|ref|YP_004423118.1| hypothetical protein PNA2_0196 [Pyrococcus sp. NA2] gi|331033302|gb|AEC51114.1| hypothetical protein PNA2_0196 [Pyrococcus sp. NA2] Length = 419 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 73/188 (38%), Gaps = 41/188 (21%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFC---------FRREMVGSQKGTVLSSKDTEAALAYI 138 G++ R + I ++ C + C FC R+ ++ + A Sbjct: 108 GLIDRGTNLIQVRGSTGCNMSCIFCSVDEGPYSRTRKLDFVVDVDYLMKWFNWVAE---- 163 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 Q+ + + G+PL+ + ++++ LR +V ++ S + +N +L++ Sbjct: 164 QKGKGLEAHLDAQGEPLLYP--FIVELVQALRDHPNVSVISMQSNGVL-----LNDKLVE 216 Query: 199 CLKEAGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLANAGIILLSQSV 242 L EAG V ++IH E + L NAGI +L V Sbjct: 217 ELAEAGLDRVNLSIH-----SLDPEKAKMLMGRKDYDLEHVLEMAEALVNAGIDVLIAPV 271 Query: 243 LLKGINDD 250 ++ GIND+ Sbjct: 272 IIFGINDN 279 >gi|229166606|ref|ZP_04294358.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621] gi|228616860|gb|EEK73933.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621] Length = 338 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGRDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ L ++++ L I V+ + Sbjct: 77 PLLRKD--LPELIQRLNEIDGVEDI 99 >gi|94496981|ref|ZP_01303555.1| probable molybdenum cofactor biosynthesis protein [Sphingomonas sp. SKA58] gi|94423657|gb|EAT08684.1| probable molybdenum cofactor biosynthesis protein [Sphingomonas sp. SKA58] Length = 326 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 22/164 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + CR+C M + VLS ++ + I ++ TGG+PL+ Sbjct: 14 ISVTDRCDLRCRYCMAERMHFLPRDQVLSLEEIALLADLFIAR-GITKIRLTGGEPLVRR 72 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRV----PIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 + ++++ + S + + R++ + V +++ + Sbjct: 73 D--IGELVRRIGRH-------LGSGLDELTLTTNATRLDSHAQDLFDAGVRRVNVSLDSR 123 Query: 215 HPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250 P F++ A + AG+ + V LKGINDD Sbjct: 124 DPARFADVTRGGDIGRVFAGLDAARAAGLAVKINMVALKGINDD 167 >gi|172056823|ref|YP_001813283.1| RNA modification protein [Exiguobacterium sibiricum 255-15] gi|171989344|gb|ACB60266.1| RNA modification enzyme, MiaB family [Exiguobacterium sibiricum 255-15] Length = 444 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 49/124 (39%), Gaps = 12/124 (9%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150 R LK+ C +C FC G + K + + +I I T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRQPEDVLKQAQQLVD--AGYKEIVLTGIHT 199 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI- 209 GG L L K+LK L + ++ LR S ++ +I E++ LK++ P+ + Sbjct: 200 GGYGEDLKDYNLAKLLKALESVTGLERLRISS----IEASQITDEVLDVLKDS--PIVVR 253 Query: 210 AIHA 213 +H Sbjct: 254 HLHV 257 >gi|32266379|ref|NP_860411.1| hypothetical protein HH0880 [Helicobacter hepaticus ATCC 51449] gi|32262429|gb|AAP77477.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449] Length = 423 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 15/124 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C C +C V + + E + + + + EV+ TG + Sbjct: 135 KSRAFLKIQEGCDFACSYCII-PFVRGKARSYPQKSILEQ-IRALAQNGK-TEVVLTGTN 191 Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK----EAGK 205 L L +++K + + ++ LR S ++P +I+ EL + L+ E Sbjct: 192 VGSYGKDLKDYNLARLIKDIYSLGVLKRLRVGS----LEPSQIDSELKESLELPFMEKHL 247 Query: 206 PVYI 209 + + Sbjct: 248 HIAL 251 >gi|117928855|ref|YP_873406.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B] gi|166217236|sp|A0LVG0|MOAA_ACIC1 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|117649318|gb|ABK53420.1| GTP cyclohydrolase subunit MoaA [Acidothermus cellulolyticus 11B] Length = 362 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 42/183 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGG 152 + + C + CR+C RE+ G + +L+ ++ A A+I+ + ++ TGG Sbjct: 18 ISVTDRCNMRCRYCMPREIFGPNFTFLPRSELLTFEEITRIAAAFIRA--GVRKIRLTGG 75 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQIL----------RF-------HSRVPIVDPQRINPE 195 +PL+ + L +++ L + V L R+ R V +NP Sbjct: 76 EPLLRAD--LPRLVAMLADLPDVHDLALTTNGSLLARYARPLRDAGLRRVTVSLDTLNPA 133 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGIND-DPEI 253 L + P+ + +A I +AG + +V+ +G+ND D E Sbjct: 134 TFSRLADTDIPL-------------DNVLAGIDAAQSAGFFPIKLNAVIRRGVNDGDVEE 180 Query: 254 LAN 256 LA Sbjct: 181 LAA 183 >gi|194334439|ref|YP_002016299.1| nitrogenase cofactor biosynthesis protein NifB [Prosthecochloris aestuarii DSM 271] gi|194312257|gb|ACF46652.1| nitrogenase cofactor biosynthesis protein NifB [Prosthecochloris aestuarii DSM 271] Length = 424 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 44/214 (20%), Positives = 76/214 (35%), Gaps = 49/214 (22%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAY----IQEKSQIWEVI 148 RI L + C + C +C R+ ++ ++SK AL Y I+ I V Sbjct: 20 GRIHLPVAPKCNIQCNYCNRKFDCLNENRPGVTSKVLSPHQALHYLDKAIELSPNISVVG 79 Query: 149 FTG-GDPLILSHKRLQK------------------------VLKTLRY--IKHVQILRFH 181 G GDP + ++ ++ L + HV L + Sbjct: 80 IAGPGDPFANPEETMETLRLVREKYPDMLLCVATNGLNVMPYIEELAQLQVSHV-TLTIN 138 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 VDP+ I E+ ++ K +Y N E +AA+ +L G+ + Sbjct: 139 ----AVDPE-IGSEIYAWVR-HRKKMYRDT--NAAKILLESQLAALKKLKEIGVTAKVNA 190 Query: 242 VLLKGINDD-----PEILANLMRTFVELRIKPYY 270 +++ G+ND + +A L PYY Sbjct: 191 IVIPGVNDKHVAEVAKTVAELGADIF--NCLPYY 222 >gi|320161123|ref|YP_004174347.1| oxidoreductase [Anaerolinea thermophila UNI-1] gi|319994976|dbj|BAJ63747.1| oxidoreductase [Anaerolinea thermophila UNI-1] Length = 395 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 13/120 (10%) Query: 57 ARQFIP-QKEELNILPEEREDPIGDNNHSPLKGIVH-RYPD--RILLKLLHVCPVYCRFC 112 Q +P E +P E + + + I+H R PD ++ ++ C ++C C Sbjct: 11 RLQ-LPFSFLERRQMPAGAEYWLDERDG---DLILHPRKPDVRKLYIEPTTGCNLHCVTC 66 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRY 171 R V + +S + E L I ++ V+FTG G+PL + + +++ +R Sbjct: 67 IRN--VWEDEEAQMSMQTFERILEGIDHLPELKRVVFTGFGEPLTHKN--IFDMIEEIRR 122 >gi|289434309|ref|YP_003464181.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri serovar 1/2b str. SLCC3954] gi|289170553|emb|CBH27093.1| molybdenum cofactor biosynthesis protein A [Listeria seeligeri serovar 1/2b str. SLCC3954] Length = 333 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 69/174 (39%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + I K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSQDEIVGFME-IMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHADRFQTITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170 >gi|16800108|ref|NP_470376.1| molybdenum cofactor biosynthesis protein A [Listeria innocua Clip11262] gi|24211995|sp|Q92CY2|MOAA_LISIN RecName: Full=Molybdenum cofactor biosynthesis protein A gi|16413498|emb|CAC96270.1| lin1039 [Listeria innocua Clip11262] Length = 333 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170 >gi|71908225|ref|YP_285812.1| GTP cyclohydrolase subunit MoaA [Dechloromonas aromatica RCB] gi|71847846|gb|AAZ47342.1| GTP cyclohydrolase subunit MoaA [Dechloromonas aromatica RCB] Length = 327 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 70/177 (39%), Gaps = 27/177 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C + G ++ LS + E + + V TGG+PL+ Sbjct: 19 LSVTDRCDLRCAYCMPSDFSGYEEPEHWLSFDEIERLVGLFARF-GLRRVRLTGGEPLM- 76 Query: 158 SHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA 213 K L + + ++ I V+ L +++ + Q L++AG + +++ Sbjct: 77 -RKGLAGLARRIKAIPGVEDLSLSTNGTQL---------RKHGQALRDAGVDRLNVSLDT 126 Query: 214 NHP---YEFS-----EEAIAAISRLANAG-IILLSQSVLLKGINDDP-EILANLMRT 260 P E + + +A ++ G + V L G+NDD E + + R Sbjct: 127 LQPARFAEITRRDALADVLAGLATAREIGFAPIKINMVWLAGVNDDELEAMVDFCRQ 183 >gi|313624269|gb|EFR94317.1| molybdenum cofactor biosynthesis protein A [Listeria innocua FSL J1-023] Length = 333 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170 >gi|168217043|ref|ZP_02642668.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239] gi|182625833|ref|ZP_02953599.1| conserved hypothetical protein [Clostridium perfringens D str. JGS1721] gi|177908867|gb|EDT71359.1| conserved hypothetical protein [Clostridium perfringens D str. JGS1721] gi|182380957|gb|EDT78436.1| conserved hypothetical protein [Clostridium perfringens NCTC 8239] Length = 445 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 53/177 (29%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L C C FCF ++ + T+ D ++ L+++Q V T Sbjct: 79 AILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FVTLT-----N 128 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + + + +++K RI+ P+ +++H +P Sbjct: 129 MKDEDIDRIIK----------------------YRIS------------PINVSVHTTNP 154 Query: 217 --------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 F+ + +LA AGI + +Q V++ GIN + + L + +LR Sbjct: 155 DLRKKILNNRFAGNVYERLQKLAAAGITVNAQIVVMPGIN-NGDELVRTVEDLYKLR 210 >gi|110802540|ref|YP_699042.1| hypothetical protein CPR_1727 [Clostridium perfringens SM101] gi|168207283|ref|ZP_02633288.1| conserved hypothetical protein [Clostridium perfringens E str. JGS1987] gi|169342694|ref|ZP_02863735.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] gi|110683041|gb|ABG86411.1| conserved hypothetical protein [Clostridium perfringens SM101] gi|169299200|gb|EDS81270.1| conserved hypothetical protein [Clostridium perfringens C str. JGS1495] gi|170661336|gb|EDT14019.1| conserved hypothetical protein [Clostridium perfringens E str. JGS1987] Length = 445 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 53/177 (29%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L C C FCF ++ + T+ D ++ L+++Q V T Sbjct: 79 AILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FVTLT-----N 128 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + + + +++K RI+ P+ +++H +P Sbjct: 129 MKDEDIDRIIK----------------------YRIS------------PINVSVHTTNP 154 Query: 217 --------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 F+ + +LA AGI + +Q V++ GIN + + L + +LR Sbjct: 155 DLRKKILNNRFAGNVYERLQKLAAAGITVNAQIVVMPGIN-NGDELVRTVEDLYKLR 210 >gi|18310738|ref|NP_562672.1| hypothetical protein CPE1756 [Clostridium perfringens str. 13] gi|110800057|ref|YP_696442.1| hypothetical protein CPF_2009 [Clostridium perfringens ATCC 13124] gi|168210611|ref|ZP_02636236.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC 3626] gi|168214233|ref|ZP_02639858.1| conserved hypothetical protein [Clostridium perfringens CPE str. F4969] gi|18145419|dbj|BAB81462.1| conserved hypothetical protein [Clostridium perfringens str. 13] gi|110674704|gb|ABG83691.1| conserved hypothetical protein [Clostridium perfringens ATCC 13124] gi|170711255|gb|EDT23437.1| conserved hypothetical protein [Clostridium perfringens B str. ATCC 3626] gi|170714325|gb|EDT26507.1| conserved hypothetical protein [Clostridium perfringens CPE str. F4969] Length = 445 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 65/177 (36%), Gaps = 53/177 (29%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L C C FCF ++ + T+ D ++ L+++Q V T Sbjct: 79 AILDKAKSCTNKCIFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FVTLT-----N 128 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + + + +++K RI+ P+ +++H +P Sbjct: 129 MKDEDIDRIIK----------------------YRIS------------PINVSVHTTNP 154 Query: 217 --------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 F+ + +LA AGI + +Q V++ GIN + + L + +LR Sbjct: 155 DLRKKILNNRFAGNVYERLQKLAAAGITVNAQIVVMPGIN-NGDELVRTVEDLYKLR 210 >gi|290893803|ref|ZP_06556782.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes FSL J2-071] gi|290556630|gb|EFD90165.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes FSL J2-071] Length = 333 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170 >gi|254828424|ref|ZP_05233111.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes FSL N3-165] gi|258600819|gb|EEW14144.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes FSL N3-165] Length = 333 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170 >gi|238917088|ref|YP_002930605.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750] gi|238872448|gb|ACR72158.1| 2-alkenal reductase [Eubacterium eligens ATCC 27750] Length = 446 Score = 48.2 bits (114), Expect = 0.002, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 20/127 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R +K+ C +C +C + G + +D + + + EV+ TG Sbjct: 149 HTRAYIKIQDGCNQFCSYCIIPYVRGRVRSR--KPEDIVNEVKTLAAT-GVKEVVLTGIH 205 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++++ + I+ ++ +R S ++P+ I E + + K Sbjct: 206 ISSYGTD---LENISLIELIEAIHEIEGIKRIRLGS----LEPRIITEEFAKRIAGLEK- 257 Query: 207 VYIAIHA 213 I H Sbjct: 258 --ICPHF 262 >gi|242371916|ref|ZP_04817490.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus epidermidis M23864:W1] gi|242350423|gb|EES42024.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus epidermidis M23864:W1] Length = 340 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 68/177 (38%), Gaps = 44/177 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 L + C C +C +E+ G K +L+ + ++ I + + ++ TGG+ Sbjct: 18 LSVTDRCNFRCDYCMPKEIFGDDFVFLPKDELLTFDEMTR-ISRIYAELGVKKIRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ + L ++++ L I+ ++ + + LK+ G+ +Y Sbjct: 77 PLL--RRNLYQLIEQLNEIEGIEDIGLTTNGL-------------LLKKHGQKLYDAGLR 121 Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250 I + + ++ AI+ +L Q V+ KG+NDD Sbjct: 122 RINVSLDA---IDDQVFQAINNRNIKASTILEQIDYAVSIGFHVKVNVVIQKGVNDD 175 >gi|313609517|gb|EFR85068.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes FSL F2-208] Length = 333 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170 >gi|299537483|ref|ZP_07050777.1| molybdenum cofactor biosynthesis protein A [Lysinibacillus fusiformis ZC1] gi|298727044|gb|EFI67625.1| molybdenum cofactor biosynthesis protein A [Lysinibacillus fusiformis ZC1] Length = 338 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 50/270 (18%), Positives = 91/270 (33%), Gaps = 56/270 (20%) Query: 90 VHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143 +HR P R L + + C CR+C E+ G +LS + E + I Sbjct: 8 LHR-PLRDLRISVTDRCNFRCRYCMPAEVFGPDYAFLPSDKILSFDEIERLVK-IFVSLG 65 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS------------------RVP 185 + ++ TGG+PL+ L +++ + IK V+ + + RV Sbjct: 66 VKKIRITGGEPLLRRD--LPELIARIHRIKGVEDIALTTNGSLLKKYAQPLAQAGLARVS 123 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 + + + GK + + I + A AG+ + V+ K Sbjct: 124 VSLDSLDDERFFEMNGYRGKVL--------------PVLEGIEKAAEAGLQVKINMVVQK 169 Query: 246 GIND-DPEILANLM-RTFVELRIKPYYLHHPDLAAGTSHFRL-TIEEGQKIVASLKEKIS 302 G N+ D +A LR Y ++ +RL + ++I+ + + Sbjct: 170 GKNEQDIVTMAQFFKEKQHILRFIEY-----MDVGNSNGWRLDDVVSKKEIIEQIHQFTP 224 Query: 303 GLCQPFYILDLPGGYGKVKIDTHNIKKVGN 332 QP P G+V G Sbjct: 225 --LQPV----APNYKGEVATRYQYQDAQGE 248 >gi|327311114|ref|YP_004338011.1| Radical SAM domain-containing protein [Thermoproteus uzoniensis 768-20] gi|326947593|gb|AEA12699.1| Radical SAM domain protein [Thermoproteus uzoniensis 768-20] Length = 370 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 49/307 (15%), Positives = 100/307 (32%), Gaps = 69/307 (22%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD---TEAALAYIQEKSQIWEVI 148 + P + ++ CP+ CR C ++ G + + + E + + + ++ I Sbjct: 12 KRPLLVFWEVTRACPLACRHCRADAILKPLPGELSTWEAKAFLEQLVDFGRPPPEL---I 68 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207 TGGDPL+ L ++L + + +P ++ L + L E + Sbjct: 69 VTGGDPLMRLD--LMEILDYAKELG----------IPTSLAPAVSKNLFEALPELRGRIK 116 Query: 208 YIAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANL 257 +I + E EE AI L AGI + +V+ + L ++ Sbjct: 117 SASISLDGLKEVHEELRGVPGVFDSTIEAIKALMGAGIRVQVNTVVWRK---SFPQLPDV 173 Query: 258 MRTFVELRIKPYYLHHPD---------LAAGTSH-----FRLTIEE-GQKI-------VA 295 + +L ++ + + + + F + G +I Sbjct: 174 FKLIYDLGVRVWEVFFLIETGRAVKALDISPQEYEDAVQFLVDASRYGVQIRTVEAPFYR 233 Query: 296 SLK-EKISG--LCQPFY------ILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVH- 345 K ++ SG P Y + +L G K +D + + V+ Sbjct: 234 RAKIQRASGLSYTSPAYEKLVARLRELMGEP-KKPLDPTVVPTRDGHGIIFVAYDGTVYP 292 Query: 346 ----DYP 348 YP Sbjct: 293 SGFLPYP 299 >gi|310779510|ref|YP_003967843.1| MiaB-like tRNA modifying enzyme [Ilyobacter polytropus DSM 2926] gi|309748833|gb|ADO83495.1| MiaB-like tRNA modifying enzyme [Ilyobacter polytropus DSM 2926] Length = 437 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 14/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R +K+ C +C +C + + + + A+ I K E+I G + Sbjct: 147 SRAYIKIQDGCNNFCSYC-KIPFARGKSRSRKLKSILKEAV--ILAKEGFKEIIIIGINL 203 Query: 155 LIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + + + +L + + ++ +R S + P +I+ I+ +K K + Sbjct: 204 GVYGEDIPENGDFETLLDEISKVDGIERIRIGS----MYPDKISDRFIELMKNNSK-LMP 258 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + +E + A++R Sbjct: 259 HLHIS-LQSCDDEILKAMNR 277 >gi|170735545|ref|YP_001774659.1| molybdenum cofactor biosynthesis protein A [Burkholderia cenocepacia MC0-3] gi|169821583|gb|ACA96164.1| molybdenum cofactor biosynthesis protein A [Burkholderia cenocepacia MC0-3] Length = 374 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 83/233 (35%), Gaps = 58/233 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154 L ++ C C +C RE G+ + SS+ A L I + ++ TGG+P Sbjct: 46 LSVIDQCNFRCGYCMPRESFGTDYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEP 105 Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192 L+ + L+ +++ L + V + LR SRV + + Sbjct: 106 LL--RRNLEALIERLATLTTVDGKPVEIALTTNGSLLAAKARALRDAGLSRVTVSL-DAL 162 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251 + + + + +A PV + A I AG + +V+ +G+NDD Sbjct: 163 DDAVFRRMNDADVPVARVL-------------AGIEAAHAAGLAPVKVNAVIERGVNDD- 208 Query: 252 EILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296 + L+R F + Y G S + + ++++ Sbjct: 209 -QILPLVRHFRHTGVAVRFIEY-----MDVGGASFWSGDKVVPAARMRELIDE 255 >gi|224500308|ref|ZP_03668657.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes Finland 1988] Length = 333 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170 >gi|16803087|ref|NP_464572.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes EGD-e] gi|47096135|ref|ZP_00233735.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes str. 1/2a F6854] gi|224502639|ref|ZP_03670946.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes FSL R2-561] gi|254830184|ref|ZP_05234839.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes 10403S] gi|254898780|ref|ZP_05258704.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes J0161] gi|254911731|ref|ZP_05261743.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes J2818] gi|254936057|ref|ZP_05267754.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes F6900] gi|255029181|ref|ZP_05301132.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes LO28] gi|284801379|ref|YP_003413244.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes 08-5578] gi|284994521|ref|YP_003416289.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes 08-5923] gi|24211990|sp|Q8Y870|MOAA_LISMO RecName: Full=Molybdenum cofactor biosynthesis protein A gi|16410449|emb|CAC99125.1| lmo1047 [Listeria monocytogenes EGD-e] gi|47015484|gb|EAL06417.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes str. 1/2a F6854] gi|258608646|gb|EEW21254.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes F6900] gi|284056941|gb|ADB67882.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes 08-5578] gi|284059988|gb|ADB70927.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes 08-5923] gi|293589681|gb|EFF98015.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes J2818] Length = 333 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170 >gi|315281772|ref|ZP_07870331.1| molybdenum cofactor biosynthesis protein A [Listeria marthii FSL S4-120] gi|313614582|gb|EFR88167.1| molybdenum cofactor biosynthesis protein A [Listeria marthii FSL S4-120] Length = 333 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LKEAG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKEAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHADRFQAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170 >gi|282908895|ref|ZP_06316713.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus subsp. aureus WW2703/97] gi|283958340|ref|ZP_06375791.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus A017934/97] gi|282327159|gb|EFB57454.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus subsp. aureus WW2703/97] gi|283790489|gb|EFC29306.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus A017934/97] Length = 448 Score = 47.8 bits (113), Expect = 0.002, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|302333252|gb|ADL23445.1| radical SAM domain protein [Staphylococcus aureus subsp. aureus JKD6159] Length = 448 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|254519873|ref|ZP_05131929.1| predicted protein [Clostridium sp. 7_2_43FAA] gi|226913622|gb|EEH98823.1| predicted protein [Clostridium sp. 7_2_43FAA] Length = 434 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 15/125 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C GS + + E E+I +G Sbjct: 141 KTRAFLKIQDGCNRFCTYCIIPYSRGSVCSKDPKK--VLEEVNKLAEH-GFKEIILSGIH 197 Query: 154 PLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 L +++ + ++ ++ +R S ++P PE+I+ +K+ K Sbjct: 198 TASYGLDLEGSVNLIDIIEEIEKVEGIERIRIGS----IEPAFFTPEVIEKIKKFKK--- 250 Query: 209 IAIHA 213 + H Sbjct: 251 LCPHF 255 >gi|21283257|ref|NP_646345.1| hypothetical protein MW1528 [Staphylococcus aureus subsp. aureus MW2] gi|49486411|ref|YP_043632.1| hypothetical protein SAS1514 [Staphylococcus aureus subsp. aureus MSSA476] gi|57651969|ref|YP_186473.1| hypothetical protein SACOL1633 [Staphylococcus aureus subsp. aureus COL] gi|87160469|ref|YP_494231.1| hypothetical protein SAUSA300_1536 [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88195385|ref|YP_500189.1| hypothetical protein SAOUHSC_01679 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268060|ref|YP_001247003.1| RNA modification protein [Staphylococcus aureus subsp. aureus JH9] gi|150394128|ref|YP_001316803.1| RNA modification protein [Staphylococcus aureus subsp. aureus JH1] gi|151221691|ref|YP_001332513.1| hypothetical protein NWMN_1479 [Staphylococcus aureus subsp. aureus str. Newman] gi|161509804|ref|YP_001575463.1| hypothetical protein USA300HOU_1577 [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253316051|ref|ZP_04839264.1| hypothetical protein SauraC_07882 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253732229|ref|ZP_04866394.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253733173|ref|ZP_04867338.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus TCH130] gi|257793652|ref|ZP_05642631.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9781] gi|258411048|ref|ZP_05681328.1| RNA modification protein [Staphylococcus aureus A9763] gi|258420148|ref|ZP_05683103.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9719] gi|258437408|ref|ZP_05689392.1| RNA modification protein [Staphylococcus aureus A9299] gi|258443614|ref|ZP_05691953.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|258446821|ref|ZP_05694975.1| RNA modification protein [Staphylococcus aureus A6300] gi|258448735|ref|ZP_05696847.1| RNA modification protein [Staphylococcus aureus A6224] gi|258450595|ref|ZP_05698657.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5948] gi|258453552|ref|ZP_05701530.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5937] gi|262049149|ref|ZP_06022026.1| hypothetical protein SAD30_0306 [Staphylococcus aureus D30] gi|262051236|ref|ZP_06023460.1| hypothetical protein SA930_1667 [Staphylococcus aureus 930918-3] gi|269203204|ref|YP_003282473.1| hypothetical protein SAAV_1568 [Staphylococcus aureus subsp. aureus ED98] gi|282893077|ref|ZP_06301311.1| MiaB tRNA modifying enzyme [Staphylococcus aureus A8117] gi|282920125|ref|ZP_06327850.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9765] gi|282928209|ref|ZP_06335814.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A10102] gi|284024635|ref|ZP_06379033.1| hypothetical protein Saura13_08590 [Staphylococcus aureus subsp. aureus 132] gi|294848607|ref|ZP_06789353.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9754] gi|295406699|ref|ZP_06816504.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8819] gi|296275802|ref|ZP_06858309.1| hypothetical protein SauraMR_05622 [Staphylococcus aureus subsp. aureus MR1] gi|297207705|ref|ZP_06924140.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297245719|ref|ZP_06929584.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8796] gi|300911786|ref|ZP_07129229.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus TCH70] gi|304380835|ref|ZP_07363495.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|21204697|dbj|BAB95393.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49244854|emb|CAG43315.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MSSA476] gi|57286155|gb|AAW38249.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus COL] gi|87126443|gb|ABD20957.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87202943|gb|ABD30753.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741129|gb|ABQ49427.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp. aureus JH9] gi|149946580|gb|ABR52516.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp. aureus JH1] gi|150374491|dbj|BAF67751.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] gi|160368613|gb|ABX29584.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253724018|gb|EES92747.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|253728713|gb|EES97442.1| 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus TCH130] gi|257787624|gb|EEV25964.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9781] gi|257840198|gb|EEV64662.1| RNA modification protein [Staphylococcus aureus A9763] gi|257843859|gb|EEV68253.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9719] gi|257848613|gb|EEV72601.1| RNA modification protein [Staphylococcus aureus A9299] gi|257851020|gb|EEV74963.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|257854396|gb|EEV77345.1| RNA modification protein [Staphylococcus aureus A6300] gi|257858013|gb|EEV80902.1| RNA modification protein [Staphylococcus aureus A6224] gi|257861753|gb|EEV84552.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5948] gi|257864283|gb|EEV87033.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A5937] gi|259160873|gb|EEW45893.1| hypothetical protein SA930_1667 [Staphylococcus aureus 930918-3] gi|259162818|gb|EEW47383.1| hypothetical protein SAD30_0306 [Staphylococcus aureus D30] gi|262075494|gb|ACY11467.1| hypothetical protein SAAV_1568 [Staphylococcus aureus subsp. aureus ED98] gi|269941066|emb|CBI49450.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus TW20] gi|282590016|gb|EFB95098.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A10102] gi|282594473|gb|EFB99458.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9765] gi|282764395|gb|EFC04521.1| MiaB tRNA modifying enzyme [Staphylococcus aureus A8117] gi|283470855|emb|CAQ50066.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ST398] gi|285817258|gb|ADC37745.1| MiaB family protein, possibly involved in tRNA or rRNA modification [Staphylococcus aureus 04-02981] gi|294824633|gb|EFG41056.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A9754] gi|294968446|gb|EFG44470.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8819] gi|296887722|gb|EFH26620.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC 51811] gi|297177370|gb|EFH36622.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus A8796] gi|298694858|gb|ADI98080.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ED133] gi|300886032|gb|EFK81234.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus TCH70] gi|304340562|gb|EFM06496.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312829964|emb|CBX34806.1| RNA modification enzyme, MiaB family protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129855|gb|EFT85845.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus CGS03] gi|315198728|gb|EFU29056.1| possible 2-methylthioadenine synthase [Staphylococcus aureus subsp. aureus CGS01] gi|320140539|gb|EFW32393.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp. aureus MRSA131] gi|320144076|gb|EFW35845.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp. aureus MRSA177] gi|323440474|gb|EGA98186.1| hypothetical protein SAO11_0770 [Staphylococcus aureus O11] gi|323443248|gb|EGB00866.1| hypothetical protein SAO46_0897 [Staphylococcus aureus O46] gi|329727386|gb|EGG63842.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp. aureus 21172] gi|329728416|gb|EGG64853.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp. aureus 21189] gi|329733119|gb|EGG69456.1| tRNA methylthiotransferase YqeV [Staphylococcus aureus subsp. aureus 21193] Length = 448 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|329314252|gb|AEB88665.1| RNA modification enzyme, MiaB family [Staphylococcus aureus subsp. aureus T0131] Length = 448 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|221140004|ref|ZP_03564497.1| hypothetical protein SauraJ_00040 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|302751406|gb|ADL65583.1| radical SAM domain protein [Staphylococcus aureus subsp. aureus str. JKD6008] Length = 448 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|49483824|ref|YP_041048.1| hypothetical protein SAR1653 [Staphylococcus aureus subsp. aureus MRSA252] gi|257425701|ref|ZP_05602125.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257428362|ref|ZP_05604760.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257430999|ref|ZP_05607379.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257433687|ref|ZP_05610045.1| RNA modification protein [Staphylococcus aureus subsp. aureus E1410] gi|257436601|ref|ZP_05612645.1| RNA modification protein [Staphylococcus aureus subsp. aureus M876] gi|282904158|ref|ZP_06312046.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus C160] gi|282905985|ref|ZP_06313840.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus Btn1260] gi|282911214|ref|ZP_06319016.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus subsp. aureus WBG10049] gi|282914383|ref|ZP_06322169.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M899] gi|282919352|ref|ZP_06327087.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp. aureus C427] gi|282924677|ref|ZP_06332345.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp. aureus C101] gi|293503457|ref|ZP_06667304.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus 58-424] gi|293510474|ref|ZP_06669180.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp. aureus M809] gi|293531014|ref|ZP_06671696.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M1015] gi|295428154|ref|ZP_06820786.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp. aureus EMRSA16] gi|297590880|ref|ZP_06949518.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus subsp. aureus MN8] gi|49241953|emb|CAG40648.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257271395|gb|EEV03541.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257275203|gb|EEV06690.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257278429|gb|EEV09065.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257281780|gb|EEV11917.1| RNA modification protein [Staphylococcus aureus subsp. aureus E1410] gi|257283952|gb|EEV14075.1| RNA modification protein [Staphylococcus aureus subsp. aureus M876] gi|282313512|gb|EFB43907.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp. aureus C101] gi|282317162|gb|EFB47536.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp. aureus C427] gi|282321564|gb|EFB51889.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M899] gi|282324909|gb|EFB55219.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus subsp. aureus WBG10049] gi|282331277|gb|EFB60791.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus Btn1260] gi|282595776|gb|EFC00740.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus C160] gi|290920282|gb|EFD97348.1| Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus M1015] gi|291095123|gb|EFE25388.1| MiaB tRNA modifying enzyme [Staphylococcus aureus subsp. aureus 58-424] gi|291466838|gb|EFF09358.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp. aureus M809] gi|295128512|gb|EFG58146.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp. aureus EMRSA16] gi|297575766|gb|EFH94482.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus subsp. aureus MN8] gi|312437955|gb|ADQ77026.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Staphylococcus aureus subsp. aureus TCH60] gi|315195479|gb|EFU25866.1| hypothetical protein CGSSa00_07410 [Staphylococcus aureus subsp. aureus CGS00] Length = 448 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|15924566|ref|NP_372100.1| hypothetical protein SAV1576 [Staphylococcus aureus subsp. aureus Mu50] gi|15927156|ref|NP_374689.1| hypothetical protein SA1405 [Staphylococcus aureus subsp. aureus N315] gi|156979894|ref|YP_001442153.1| hypothetical protein SAHV_1563 [Staphylococcus aureus subsp. aureus Mu3] gi|255006362|ref|ZP_05144963.2| hypothetical protein SauraM_07835 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|13701374|dbj|BAB42668.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14247347|dbj|BAB57738.1| putative 2-methylthioadenine synthetase [Staphylococcus aureus subsp. aureus Mu50] gi|156722029|dbj|BAF78446.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] Length = 448 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|237737741|ref|ZP_04568222.1| Fe-S oxidoreductase [Fusobacterium mortiferum ATCC 9817] gi|229419621|gb|EEO34668.1| Fe-S oxidoreductase [Fusobacterium mortiferum ATCC 9817] Length = 432 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 25/145 (17%) Query: 95 DRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R +K+ C +C +C R +K +L K+ E + E+I Sbjct: 146 SRAYVKIQDGCNNFCSYCKIPFARGRSRSRKKENIL--KEIEKLV-----NEGFKEIILI 198 Query: 151 GGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G + L + L++ +L+ + +K ++ +R S V P +I+ + K Sbjct: 199 GIN-LGAYGEDLEEDIDFEDLLEKILQVKGLERVRIGS----VYPDKISDRFVDMFK--Y 251 Query: 205 KPVYIAIHANHPYEFSEEAIAAISR 229 K + +H + + + + R Sbjct: 252 KNLMPHLHIS-LQSCDDTVLKMMKR 275 >gi|323703069|ref|ZP_08114724.1| protein of unknown function DUF512 [Desulfotomaculum nigrificans DSM 574] gi|323531963|gb|EGB21847.1| protein of unknown function DUF512 [Desulfotomaculum nigrificans DSM 574] Length = 436 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 63/184 (34%), Gaps = 58/184 (31%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 C C FCF +M + + T+ YI++ Sbjct: 84 FGPTRTCHNRCMFCFVDQMAPNMRPTL-----------YIRDD----------------- 115 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216 RL + +V+ + EL + + + P+YI++H +P Sbjct: 116 DYRLSFWQGNFISLTNVK----------------DEELQRIIHQKMGPLYISVHTTNPEL 159 Query: 217 ------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVEL 264 + + + + +LA GI + +Q+VL G+ND E+ LA L L Sbjct: 160 RRRMLNNRHAGKIMDQLRQLAAGGIEMHTQAVLCPGVNDGQEMERTITDLAGLWPRVHSL 219 Query: 265 RIKP 268 + P Sbjct: 220 AVVP 223 >gi|332652770|ref|ZP_08418515.1| Fe-S oxidoreductase [Ruminococcaceae bacterium D16] gi|332517916|gb|EGJ47519.1| Fe-S oxidoreductase [Ruminococcaceae bacterium D16] Length = 476 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 37/171 (21%), Positives = 63/171 (36%), Gaps = 39/171 (22%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 + L+ C C FCF +M + T+ D +A L+++ G+ Sbjct: 97 ETYLMDRARSCANNCIFCFVDQMPPGMRDTLYFKDD-DARLSFL------------MGNY 143 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHA 213 L L++ L + +I+ H V +P+L ++ LK Sbjct: 144 LTLTN---------LSQREVQRIIDLHISPINVSVHTTDPQLRVEMLKNKR--------- 185 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 + E+I + R A A I + Q V G+ND P + L R E+ Sbjct: 186 ------AGESIEVMRRFAAANITMNCQIVSCPGVNDGPALDRTL-RELSEM 229 >gi|254884770|ref|ZP_05257480.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 4_3_47FAA] gi|294774983|ref|ZP_06740513.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides vulgatus PC510] gi|319644167|ref|ZP_07998692.1| hypothetical protein HMPREF9011_04295 [Bacteroides sp. 3_1_40A] gi|254837563|gb|EET17872.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 4_3_47FAA] gi|294451192|gb|EFG19662.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides vulgatus PC510] gi|317384289|gb|EFV65260.1| hypothetical protein HMPREF9011_04295 [Bacteroides sp. 3_1_40A] Length = 152 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 25/60 (41%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C +CR C E GT L+ + E + I + + F+GGDPL + L Sbjct: 25 GCRHHCRGCQNPESWNPSAGTPLTPEKIEKMICEINANPLLDGITFSGGDPLYHPQEFLA 84 >gi|182626906|ref|ZP_02954640.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens D str. JGS1721] gi|177907756|gb|EDT70368.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens D str. JGS1721] Length = 434 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R LK+ C +C +C + SKD + L I+ ++ E+I +G Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195 Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 ++ L +L+ + I ++ +R S +DP ++++ + K Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250 Query: 207 VYIAIHA 213 + H Sbjct: 251 --LCPHF 255 >gi|168215652|ref|ZP_02641277.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens NCTC 8239] gi|182382416|gb|EDT79895.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens NCTC 8239] Length = 434 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R LK+ C +C +C + SKD + L I+ ++ E+I +G Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195 Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 ++ L +L+ + I ++ +R S +DP ++++ + K Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250 Query: 207 VYIAIHA 213 + H Sbjct: 251 --LCPHF 255 >gi|110803412|ref|YP_699306.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens SM101] gi|110683913|gb|ABG87283.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens SM101] Length = 434 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R LK+ C +C +C + SKD + L I+ ++ E+I +G Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195 Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 ++ L +L+ + I ++ +R S +DP ++++ + K Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250 Query: 207 VYIAIHA 213 + H Sbjct: 251 --LCPHF 255 >gi|110801313|ref|YP_696705.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens ATCC 13124] gi|110675960|gb|ABG84947.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens ATCC 13124] Length = 434 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R LK+ C +C +C + SKD + L I+ ++ E+I +G Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195 Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 ++ L +L+ + I ++ +R S +DP ++++ + K Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250 Query: 207 VYIAIHA 213 + H Sbjct: 251 --LCPHF 255 >gi|18311007|ref|NP_562941.1| MiaB-like tRNA modifying protein [Clostridium perfringens str. 13] gi|168208727|ref|ZP_02634352.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens B str. ATCC 3626] gi|168212938|ref|ZP_02638563.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens CPE str. F4969] gi|18145689|dbj|BAB81731.1| conserved hypothetical protein [Clostridium perfringens str. 13] gi|170713061|gb|EDT25243.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens B str. ATCC 3626] gi|170715635|gb|EDT27817.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens CPE str. F4969] Length = 434 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R LK+ C +C +C + SKD + L I+ ++ E+I +G Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLDEIRSLAEHGFKEIILSG 195 Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 ++ L +L+ + I ++ +R S +DP ++++ + K Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250 Query: 207 VYIAIHA 213 + H Sbjct: 251 --LCPHF 255 >gi|309811257|ref|ZP_07705048.1| molybdenum cofactor biosynthesis protein A [Dermacoccus sp. Ellin185] gi|308434797|gb|EFP58638.1| molybdenum cofactor biosynthesis protein A [Dermacoccus sp. Ellin185] Length = 362 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 86/207 (41%), Gaps = 40/207 (19%) Query: 63 QKEELNILPEERED-PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-S 120 + EL+ +D P+ D+ G VHR + + L C + C +C E V + Sbjct: 19 LRGELSTAAGVSDDGPLVDS-----FGRVHR---DLRISLTDKCNLRCTYCMPAEGVPLA 70 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + T+L+S + +A I ++ I E+ TGG+PL+ + +++ L ++ Sbjct: 71 PRDTLLASDEI-VTVARIAVEAGIDEIRLTGGEPLLRPD--IVDLVERLAALE------- 120 Query: 181 HSRVPIVDPQR-INPELIQC------LKEAGK-PVYIAIHANHPYEFSEEAIA------- 225 P P+ + ++ L++AG + +++ P F+ Sbjct: 121 ---GPGGRPELSMTTNAVRLAQLAKPLRDAGLARLNVSLDTLSPSRFATMTRRDRLDDVM 177 Query: 226 -AISRLANAG-IILLSQSVLLKGINDD 250 + AG + +VLL+G+NDD Sbjct: 178 TGLDAARCAGFAPIKINTVLLRGVNDD 204 >gi|282916846|ref|ZP_06324604.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp. aureus D139] gi|283770652|ref|ZP_06343544.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19] gi|282319333|gb|EFB49685.1| MiaB-like tRNA modifying enzyme [Staphylococcus aureus subsp. aureus D139] gi|283460799|gb|EFC07889.1| 2-alkenal reductase [Staphylococcus aureus subsp. aureus H19] Length = 448 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETINGLERIRISS----IEASQLTDEVIDVLERSTK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|239635993|ref|ZP_04677010.1| molybdenum cofactor biosynthesis protein A [Staphylococcus warneri L37603] gi|239598458|gb|EEQ80938.1| molybdenum cofactor biosynthesis protein A [Staphylococcus warneri L37603] Length = 341 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 66/177 (37%), Gaps = 44/177 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAA--LAYIQEKSQIWEVIFTGGD 153 L + C C +C +E+ G L ++ E ++ + + + ++ TGG+ Sbjct: 19 LSVTDRCNFRCDYCMPKEIFGDDF-VFLPKEELLTFEEMVRISKLYAQLGVKKIRITGGE 77 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ + L ++++ L I ++ + + LK+ G+ +Y Sbjct: 78 PLL--RRNLYQLIEQLNQIDGIEDIGLTTNGL-------------LLKKHGQNLYNAGLR 122 Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250 I I + +E AI+ +L Q V+ KG+NDD Sbjct: 123 RINISLDA---IDDEVFQAINNRNIKASTILEQIDYAISIGFKIKVNVVIQKGVNDD 176 >gi|170755099|ref|YP_001781504.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum B1 str. Okra] gi|226704813|sp|B1IN35|MOAA_CLOBK RecName: Full=Molybdenum cofactor biosynthesis protein A gi|169120311|gb|ACA44147.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum B1 str. Okra] Length = 319 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 69/164 (42%), Gaps = 22/164 (13%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E +V + ++ ++ + + ++ FTGG+PLIL Sbjct: 14 VSVTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 + K++ I ++ + + + ++++ LK+ G + I + Sbjct: 73 KD--IDKLIYNTSKINSIKDIAMTTNAI------LLEDMVEELKKDGLK-RVNISLDSLK 123 Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E + + +I + + G+ + +V++KGINDD Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMKPIKINTVIMKGINDD 167 >gi|110597800|ref|ZP_01386083.1| MiaB-like tRNA modifying enzyme [Chlorobium ferrooxidans DSM 13031] gi|110340525|gb|EAT59008.1| MiaB-like tRNA modifying enzyme [Chlorobium ferrooxidans DSM 13031] Length = 448 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 21/127 (16%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R LK+ C C +C R +++ A+ Y E++ Sbjct: 146 RTRAFLKIQDGCDSGCSYCTIPLIRGRSRSLPPDEIVARAMILASSGY-------REIVL 198 Query: 150 TG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG GD L L ++L+ L + V +R S ++P ++ E I+ + + K Sbjct: 199 TGVNIGDYLENGIG-LPELLRRLEKVP-VSRIRISS----IEPDVVDSEFIELVANS-KT 251 Query: 207 VYIAIHA 213 + +H Sbjct: 252 IVPHLHI 258 >gi|242309031|ref|ZP_04808186.1| tRNA modifying enzyme [Helicobacter pullorum MIT 98-5489] gi|239524455|gb|EEQ64321.1| tRNA modifying enzyme [Helicobacter pullorum MIT 98-5489] Length = 424 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 52/130 (40%), Gaps = 16/130 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C + G K + + + + E I TG + Sbjct: 134 KSRAFIKIQEGCDFACSYCIIPSVRG--KARSFPKEKIINQIKKLTQN-GFSEFILTGTN 190 Query: 154 PLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--EAGKP 206 + S + + K+L+++ I V+ LR S ++P +I + + L + K Sbjct: 191 --MGSWGKDLGENITKLLESICAIPQVKRLRLGS----LEPSQITQDFLDFLDNPKIEKH 244 Query: 207 VYIAIHANHP 216 ++IA+ P Sbjct: 245 LHIALQHTSP 254 >gi|253583199|ref|ZP_04860397.1| Fe-S oxidoreductase [Fusobacterium varium ATCC 27725] gi|251833771|gb|EES62334.1| Fe-S oxidoreductase [Fusobacterium varium ATCC 27725] Length = 432 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 52/141 (36%), Gaps = 17/141 (12%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R +K+ C +C +C K ++ + + E E+I G + Sbjct: 146 SRAYVKIQDGCNNFCSYCKIP--FARGKSRSRKKENIIKEIEKLVE-EGFKEIILIGIN- 201 Query: 155 LILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 L + L + +LK++ I +Q +R S V P +I+ E I K + Sbjct: 202 LGAYGEDLDEGENFESLLKSILEINKLQRVRIGS----VYPDKISDEFINMFD--NKKLM 255 Query: 209 IAIHANHPYEFSEEAIAAISR 229 +H + +E + + R Sbjct: 256 PHLHIS-LQSCDDEVLKRMRR 275 >gi|27468759|ref|NP_765396.1| molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis ATCC 12228] gi|57867756|ref|YP_189412.1| molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis RP62A] gi|251812031|ref|ZP_04826504.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus epidermidis BCM-HMP0060] gi|282875324|ref|ZP_06284197.1| molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis SK135] gi|293368414|ref|ZP_06615039.1| molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis M23864:W2(grey)] gi|38258081|sp|Q8CNE6|MOAA_STAES RecName: Full=Molybdenum cofactor biosynthesis protein A gi|81673523|sp|Q5HLY1|MOAA_STAEQ RecName: Full=Molybdenum cofactor biosynthesis protein A gi|27316307|gb|AAO05482.1|AE016750_87 molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis ATCC 12228] gi|57638414|gb|AAW55202.1| molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis RP62A] gi|251804479|gb|EES57136.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus epidermidis BCM-HMP0060] gi|281296089|gb|EFA88610.1| molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis SK135] gi|291317489|gb|EFE57910.1| molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis M23864:W2(grey)] gi|329737046|gb|EGG73301.1| molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis VCU045] Length = 340 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 69/174 (39%), Gaps = 38/174 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G K +L+ ++ ++ I + + ++ TGG+ Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDYTFLPKNELLTFEELTR-ISKIYAQLGVKKIRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ + L K+++ L I ++ + + LK+ GK +Y Sbjct: 77 PLL--RRNLYKLVEQLNLIDGIEDIGLTTNGL-------------LLKKHGKNLYQAGLR 121 Query: 209 -IAIHA-----NHPYEFSEEAIAAISRL------ANAGIILLSQSVLLKGINDD 250 I + N E + I A + L + G + V+ KG+ND+ Sbjct: 122 RINVSLDAIEDNVFQEINNRNIKASTILEQIDYAVSIGFEVKVNVVIQKGVNDN 175 >gi|302870435|ref|YP_003839072.1| radical SAM domain-containing protein [Micromonospora aurantiaca ATCC 27029] gi|302573294|gb|ADL49496.1| Radical SAM domain protein [Micromonospora aurantiaca ATCC 27029] Length = 768 Score = 47.8 bits (113), Expect = 0.003, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 52/123 (42%), Gaps = 12/123 (9%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEKSQIWE-----VIF 149 +LK+ C + C C+ E + ++ + A I E + + VI Sbjct: 14 VLKVHARCDLACDHCYVYEHADQSWRRRPVRMTPEVLRTAAGRIAEHAAAHDLPDVTVIL 73 Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GG+PL+L +RL +VL LR I V LR + V ++ +L L E V Sbjct: 74 HGGEPLLLGAERLDEVLADLRRVIAPVTRLRLGMQTNGVL---LSEQLCDLLAEHDVAVG 130 Query: 209 IAI 211 +++ Sbjct: 131 VSL 133 >gi|146277288|ref|YP_001167447.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter sphaeroides ATCC 17025] gi|145555529|gb|ABP70142.1| nitrogenase cofactor biosynthesis protein NifB [Rhodobacter sphaeroides ATCC 17025] Length = 491 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 47/241 (19%), Positives = 75/241 (31%), Gaps = 57/241 (23%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H Y R+ + + C + C +C R+ G + + LA E Q Sbjct: 58 AHHYFARMHVSVAPACNIQCNYCNRKYDCANESRPGVVSERLTPEQAARKVLAVAAEVPQ 117 Query: 144 IWEVIFTG-GDPLI---------------LSHKRL-------------QKVLKTLRYIKH 174 + + G GD L +L ++++ I H Sbjct: 118 LSVLGIAGPGDAAYDWKKTKATFDLVQTQLPDIKLCLSSNGLAVPDHVEEIVA--MNIDH 175 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 V L ++ P V +I P + + + A+ L G Sbjct: 176 V-TLTINTLDPEVG-AKIYPWVF--FRGRRHEGVEGAAILLARQM-----EALEMLVAHG 226 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHFRLTIEE 289 +++ SVL+ GIN + L R I P D A GT HF LT + Sbjct: 227 VLVKVNSVLIPGIN--EAGMVELNRIVKAKGAFLHNIMPL---ISDPAHGT-HFGLTGQR 280 Query: 290 G 290 G Sbjct: 281 G 281 >gi|257784457|ref|YP_003179674.1| pyruvate formate-lyase activating enzyme [Atopobium parvulum DSM 20469] gi|257472964|gb|ACV51083.1| pyruvate formate-lyase activating enzyme [Atopobium parvulum DSM 20469] Length = 260 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 44/195 (22%), Positives = 68/195 (34%), Gaps = 27/195 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P L+ CP+ C +C + GT S K+ A + + + TGG+ Sbjct: 25 PGTRLVVFTQGCPMRCAYCHNPDTWQFGIGTETSVKEILATFNRNRAFYRNGGITATGGE 84 Query: 154 PLILSHKRLQKVLKTLRYIKHVQ-ILRFHS----RVPIVDPQRINPELIQCLKEAGKPVY 208 PL + + L H R H+ +P+ PE + + + V Sbjct: 85 PLAQP-----EFVGALFEAAHNDPRGRIHTCLDSSGIAYNPE--TPEKFERILDNTDLVL 137 Query: 209 IAI-------HANHPYEFSEEAIAAI-SRLANAGIILLSQSVLLKGINDDPEILA----- 255 + I H N E E A L GI +L + V++ GI D E LA Sbjct: 138 LDIKHSDPKGHIN-LCEVGSERPLAFGDELNRRGIKVLIRHVVVPGITDSAEELAGVGRI 196 Query: 256 -NLMRTFVELRIKPY 269 + L + PY Sbjct: 197 IAHWDNVIGLDVLPY 211 >gi|194336426|ref|YP_002018220.1| molybdenum cofactor biosynthesis protein A [Pelodictyon phaeoclathratiforme BU-1] gi|194308903|gb|ACF43603.1| molybdenum cofactor biosynthesis protein A [Pelodictyon phaeoclathratiforme BU-1] Length = 326 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 45/270 (16%), Positives = 89/270 (32%), Gaps = 66/270 (24%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 HR+ D + + + C + C +C R E G + ++L + +A + E +V F Sbjct: 9 HRHVDYVRIAVTSRCNLRCSYCMREEHEGRADTVSLLDKNEINTIIAVLAE-LGFSKVRF 67 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQRINPEL------IQCL 200 TGG+PL+ + + +++ + ++ + + + P I+ L I L Sbjct: 68 TGGEPLL--REGIAGLVREAKQHPSIKTVGLTTNGVLLDRFLPSLIDAGLDTINFSIDTL 125 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAI-SRLANAGIILLSQSVLLKGINDDPEILANLMR 259 + G+ I + + + + L A I + V+++ IN D Sbjct: 126 -DRGRYYAI-----TRRDVYRQVRNNLDNLLKTALIAVKLNVVMMRDINSDE-------- 171 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIE-------------------EGQKIVASLKEK 300 T + +T+ KI L+ Sbjct: 172 -------------ICRFVDFTKDYDVTVRFIELQPFDDNQIWRTGRFFGADKIRELLQHH 218 Query: 301 ISGL------CQPFYILDLPGGYGKVKIDT 324 GL ++ LPG G + I Sbjct: 219 YPGLQAIRGSATQYFSYSLPGHKGSIAIIP 248 >gi|291276741|ref|YP_003516513.1| MiaB-like tRNA modifying enzyme [Helicobacter mustelae 12198] gi|290963935|emb|CBG39772.1| Putative MiaB-like tRNA modifying enzyme [Helicobacter mustelae 12198] Length = 413 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 58/158 (36%), Gaps = 24/158 (15%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R +K+ C C +C V + ++ E I + EV+ TG + Sbjct: 134 RAFIKIQEGCDFACSYCII-PSVRGISRSYPQARVLEQIG--ILADHGVSEVVLTGTNVG 190 Query: 156 ILSHK---RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK----EAGKPVY 208 + K++ + IK + +R S ++P +I+ E ++ L+ E + Sbjct: 191 SYGKDFGSNIAKLIHEISKIKGILRIRIGS----LEPSQIDEEFLELLEGDFLERHLHIA 246 Query: 209 IAIH--------ANHPYEFSEEAIAAISRLANAGIILL 238 + H N + + A + ++A+ G + Sbjct: 247 LQ-HSSDRMLEIMNRHNRVASD-RALLEKIADRGFAIG 282 >gi|289428026|ref|ZP_06429730.1| radical SAM domain protein [Propionibacterium acnes J165] gi|295131607|ref|YP_003582270.1| radical SAM domain protein [Propionibacterium acnes SK137] gi|289158909|gb|EFD07109.1| radical SAM domain protein [Propionibacterium acnes J165] gi|291376027|gb|ADD99881.1| radical SAM domain protein [Propionibacterium acnes SK137] gi|332676474|gb|AEE73290.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III oxidase [Propionibacterium acnes 266] Length = 426 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 67/208 (32%), Gaps = 45/208 (21%) Query: 93 YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 P ++ ++ C + C+ C + Q + + +Y + + I Sbjct: 45 KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYERPYPML---IL 101 Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 TGGD L +++ + HV I P V P + ++ ++EAG + Sbjct: 102 TGGDCFERPD--LVDLIEYAVSKGLHVSI------SPSVTP-LFTRDRVRAVQEAGVSMM 152 Query: 209 IA--------IH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDD 250 H +H + A L G+ +V K I++ Sbjct: 153 SMSLDGGSATTHDAFRGFPGTFDH-------TVEACHMLRELGMKFQLNTVFTAKNIHEA 205 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAA 278 P++L N ++L +Y Sbjct: 206 PQMLKNA----IDLGAMMFYTFMLVPTG 229 >gi|257467710|ref|ZP_05631806.1| Fe-S oxidoreductase [Fusobacterium ulcerans ATCC 49185] gi|317062003|ref|ZP_07926488.1| Fe-S oxidoreductase [Fusobacterium ulcerans ATCC 49185] gi|313687679|gb|EFS24514.1| Fe-S oxidoreductase [Fusobacterium ulcerans ATCC 49185] Length = 432 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 27/143 (18%), Positives = 54/143 (37%), Gaps = 21/143 (14%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152 R +K+ C +C +C G + + K+ E + EVI G Sbjct: 146 SRAYVKIQDGCNNFCSYCKIPFARGKSRSRKKYNIIKEIEKLVE-----EGFKEVILIGI 200 Query: 153 DPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 + L + L + +LK++ I ++ +R S V P +I+ E + K K Sbjct: 201 N-LGAYGEDLDEGENFESLLKSILEINKLERVRIGS----VYPDKISDEFMDMFK--NKK 253 Query: 207 VYIAIHANHPYEFSEEAIAAISR 229 + +H + ++ + + R Sbjct: 254 LMPHLHIS-LQSCDDDVLKRMRR 275 >gi|326204018|ref|ZP_08193879.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782] gi|325985785|gb|EGD46620.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782] Length = 471 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 45/115 (39%), Gaps = 14/115 (12%) Query: 97 ILLKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAAL-----AYIQEKSQIWEVIFT 150 + +H C + C++CF S + + L Y ++ + + Sbjct: 84 VSFPPVHRCNLNCQYCFAGGGNNYSGDRPEFDRERIDRLLHFVYEDYFKDYKKFRFDFVS 143 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQCLKE 202 GG+PL L+ + ++ +++ +R I R S+ + + I E+I L Sbjct: 144 GGEPL-LNFEAIRYLVERVREIDG----RKQSKSSFFLVTNGTLITDEIIDYLDR 193 >gi|315230631|ref|YP_004071067.1| hypothetical protein TERMP_00867 [Thermococcus barophilus MP] gi|315183659|gb|ADT83844.1| hypothetical protein TERMP_00867 [Thermococcus barophilus MP] Length = 424 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 77/186 (41%), Gaps = 37/186 (19%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KS 142 G++ R + I ++ C + C FC E S+ + D + + + E Sbjct: 112 GLIDRGTNLIQVRGSSGCNLSCIFCSVDEGPYSRTRRIDYVVDIDYLMKWFDEVARFKGK 171 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + + G+PL+ + ++++ L+ +V ++ S + +N +L++ L E Sbjct: 172 GLEAHLDGQGEPLLYP--FIVELVQALKEHPNVDVVSMQSNGVL-----LNDKLVEELAE 224 Query: 203 AGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 AG + +++H NH E +E L NAGI +L V++ Sbjct: 225 AGLDRINLSVHSLDPEKAKMLMGMKNYDLNHVLEMAE-------ALVNAGIDVLLAPVII 277 Query: 245 KGINDD 250 G+ND+ Sbjct: 278 FGVNDN 283 >gi|289425944|ref|ZP_06427691.1| radical SAM domain protein [Propionibacterium acnes SK187] gi|289153487|gb|EFD02201.1| radical SAM domain protein [Propionibacterium acnes SK187] Length = 426 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 67/208 (32%), Gaps = 45/208 (21%) Query: 93 YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 P ++ ++ C + C+ C + Q + + +Y + + I Sbjct: 45 KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYERPYPML---IL 101 Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 TGGD L +++ + HV I P V P + ++ ++EAG + Sbjct: 102 TGGDCFERPD--LVDLIEYAVSKGLHVSI------SPSVTP-LFTRDRVRAVQEAGVSMM 152 Query: 209 IA--------IH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDD 250 H +H + A L G+ +V K I++ Sbjct: 153 SMSLDGGSATTHDAFRGFPGTFDH-------TVEACHMLRELGMKFQLNTVFTAKNIHEA 205 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAA 278 P++L N ++L +Y Sbjct: 206 PQMLKNA----IDLGAMMFYTFMLVPTG 229 >gi|222151475|ref|YP_002560631.1| hypothetical protein MCCL_1228 [Macrococcus caseolyticus JCSC5402] gi|222120600|dbj|BAH17935.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402] Length = 448 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + + A +Q E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKEVVRQATQLVQS--GYQEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I + ++ K Sbjct: 199 TGGYGED---LKDYNLAQLLRDLETIDGLKRIRISS----IEASQLTDEVIDVIDKSNK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|168204736|ref|ZP_02630741.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens E str. JGS1987] gi|170663578|gb|EDT16261.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens E str. JGS1987] Length = 434 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R LK+ C +C +C + SKD + L I+ E+I +G Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLEEIRSLADHGFKEIILSG 195 Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 ++ L +L+ + I ++ +R S +DP ++++ + K Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250 Query: 207 VYIAIHA 213 + H Sbjct: 251 --LCPHF 255 >gi|169343507|ref|ZP_02864506.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens C str. JGS1495] gi|169298067|gb|EDS80157.1| MiaB-like tRNA modifying enzyme [Clostridium perfringens C str. JGS1495] Length = 434 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 46/127 (36%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R LK+ C +C +C + SKD + L I+ E+I +G Sbjct: 141 KTRAFLKIQDGCNRFCAYCLI-----PYTRGSVCSKDPKKVLEEIRSLADHGFKEIILSG 195 Query: 152 GDPLILS---HKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 ++ L +L+ + I ++ +R S +DP ++++ + K Sbjct: 196 IHTASYGVDLDEKVTLVDLLEEIEKIDGIERVRIGS----IDPTFFTEDVVRRILALKK- 250 Query: 207 VYIAIHA 213 + H Sbjct: 251 --LCPHF 255 >gi|257094413|ref|YP_003168054.1| Radical SAM domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046937|gb|ACV36125.1| Radical SAM domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 299 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 28/160 (17%) Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-----SQIWEVI 148 D ++L + C C FC EM + + + + ++E L I+ S+I V Sbjct: 21 DSLILPVTDGCSWNQCTFC---EMYTAPQKSFRARAESE-VLESIRHTGERIGSEIRRVF 76 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV-DP---QRINPELIQCLKEAG 204 GD L+L +RL +L +R H+ +R RV P +R + + ++ L AG Sbjct: 77 LADGDALVLPTRRLLAILDAIRT--HLPAVR---RVASYCLPRNLRRKSVDELRELAAAG 131 Query: 205 KPVYIAIHAN---------HPYEFSEEAIAAISRLANAGI 235 + + H E + A+ +L AGI Sbjct: 132 LSIAYVGAESGDDEVLERVHKGESYASTVDALDKLGQAGI 171 >gi|282854858|ref|ZP_06264192.1| radical SAM domain protein [Propionibacterium acnes J139] gi|282582004|gb|EFB87387.1| radical SAM domain protein [Propionibacterium acnes J139] Length = 426 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 67/208 (32%), Gaps = 45/208 (21%) Query: 93 YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 P ++ ++ C + C+ C + Q + + +Y + + I Sbjct: 45 KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYERPYPML---IL 101 Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 TGGD L +++ + HV I P V P + ++ ++EAG + Sbjct: 102 TGGDCFERPD--LVDLIEYAVSKGLHVSI------SPSVTP-LFTRDRVRAVQEAGVSMM 152 Query: 209 IA--------IH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDD 250 H +H + A L G+ +V K I++ Sbjct: 153 SMSLDGGSATTHDAFRGFPGTFDH-------TVEACHMLRELGMKFQLNTVFTAKNIHEA 205 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAA 278 P++L N ++L +Y Sbjct: 206 PQMLKNA----IDLGAIMFYTFMLVPTG 229 >gi|310643065|ref|YP_003947823.1| tRNA-i(6)a37 thiotransferase enzyme miab [Paenibacillus polymyxa SC2] gi|309248015|gb|ADO57582.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Paenibacillus polymyxa SC2] Length = 447 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 59/151 (39%), Gaps = 21/151 (13%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 + H R LK+ C +C FC G + +S A + + Sbjct: 137 VPDFAH--HTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDAASI-ITQARQLV--HAGYK 191 Query: 146 EVIFTG------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 E++ TG GD + + L +L L ++ ++ +R S ++ +I+ +++ Sbjct: 192 EIVLTGIHTGGYGD--DMDNYDLSDLLWDLEKVEGLERIRISS----IEASQIDEKMLDV 245 Query: 200 LKEAGKPVYIAIHANHPYEF-SEEAIAAISR 229 LK + K + H + P + + + + R Sbjct: 246 LKRSNK---LVRHFHIPLQAGDDTVLKRMRR 273 >gi|301055055|ref|YP_003793266.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis CI] gi|300377224|gb|ADK06128.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus biovar anthracis str. CI] Length = 338 Score = 47.4 bits (112), Expect = 0.003, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|229047248|ref|ZP_04192848.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676] gi|228724115|gb|EEL75460.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676] Length = 340 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 20 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L K+++ L I V+ + Sbjct: 79 PLL--RRGLPKLIERLNKIDGVEDI 101 >gi|196034109|ref|ZP_03101519.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W] gi|195993183|gb|EDX57141.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W] Length = 338 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|52141964|ref|YP_084863.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L] gi|51975433|gb|AAU16983.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L] Length = 338 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|228966456|ref|ZP_04127509.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar sotto str. T04001] gi|228793178|gb|EEM40728.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar sotto str. T04001] Length = 340 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 20 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L K+++ L I V+ + Sbjct: 79 PLL--RRGLPKLIERLHKIDGVEDI 101 >gi|229179852|ref|ZP_04307198.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus 172560W] gi|228603533|gb|EEK61008.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus 172560W] Length = 340 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 20 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L K+++ L I V+ + Sbjct: 79 PLL--RRGLPKLIERLNKIDGVEDI 101 >gi|224476684|ref|YP_002634290.1| putative radical SAM family protein [Staphylococcus carnosus subsp. carnosus TM300] gi|222421291|emb|CAL28105.1| putative radical SAM family protein [Staphylococcus carnosus subsp. carnosus TM300] Length = 448 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 49/127 (38%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATTLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I + + K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLETIDGLERIRISS----IEASQLTDEVINVISNSNK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHV 257 >gi|172065715|ref|YP_001816427.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria MC40-6] gi|171997957|gb|ACB68874.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria MC40-6] Length = 371 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 47/248 (18%), Positives = 87/248 (35%), Gaps = 61/248 (24%) Query: 85 PLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE-- 140 PL + P R L L ++ C C +C R+ G + SS+ A L I Sbjct: 30 PLDTLAR--PLRDLRLSVIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAF 87 Query: 141 -KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV--------------------QILR 179 + ++ TGG+PL+ + L+ +++ L + V + LR Sbjct: 88 ISLGVEKIRLTGGEPLL--RRNLEALIERLATLTTVDGKPVEIALTTNGSLLAAKARTLR 145 Query: 180 FH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-II 236 SRV + I+ + + + + PV + A I AG Sbjct: 146 DAGLSRVTVSL-DAIDDTVFRRMSDVEVPVARVL-------------AGIEAAQAAGLAP 191 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIE 288 + +V+ +G NDD + L+R F + Y G S + + Sbjct: 192 VKVNAVIERGANDD--QILPLVRHFRHSGVAVRFIEY-----MDVGGASAWSGDKVVPAT 244 Query: 289 EGQKIVAS 296 ++++ + Sbjct: 245 RMRELIEA 252 >gi|30021670|ref|NP_833301.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 14579] gi|228959754|ref|ZP_04121429.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar pakistani str. T13001] gi|229110990|ref|ZP_04240550.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock1-15] gi|229128840|ref|ZP_04257816.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-Cer4] gi|229146135|ref|ZP_04274511.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-ST24] gi|29897225|gb|AAP10502.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 14579] gi|228637346|gb|EEK93800.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-ST24] gi|228654545|gb|EEL10407.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-Cer4] gi|228672474|gb|EEL27758.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock1-15] gi|228799884|gb|EEM46826.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar pakistani str. T13001] Length = 340 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 20 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L K+++ L I V+ + Sbjct: 79 PLL--RRGLPKLIERLNKIDGVEDI 101 >gi|228916198|ref|ZP_04079768.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228843396|gb|EEM88474.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 338 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|212690793|ref|ZP_03298921.1| hypothetical protein BACDOR_00280 [Bacteroides dorei DSM 17855] gi|237708179|ref|ZP_04538660.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 9_1_42FAA] gi|237723710|ref|ZP_04554191.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. D4] gi|265756834|ref|ZP_06090822.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 3_1_33FAA] gi|212666670|gb|EEB27242.1| hypothetical protein BACDOR_00280 [Bacteroides dorei DSM 17855] gi|229437921|gb|EEO47998.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides dorei 5_1_36/D4] gi|229457732|gb|EEO63453.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 9_1_42FAA] gi|263233620|gb|EEZ19240.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 3_1_33FAA] Length = 152 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 25/60 (41%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C +CR C E GT L+ + E + I + + F+GGDPL + L Sbjct: 25 GCRHHCRGCQNPESWNPSAGTPLTPEKIEKIICEINANPLLDGITFSGGDPLYHPQEFLA 84 >gi|167947614|ref|ZP_02534688.1| hypothetical protein Epers_14152 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 59 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 36/59 (61%) Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +I +GGDPL+L +RL L L I H++ LR HSR+P+V P+RI+ L L + Sbjct: 1 MILSGGDPLLLDERRLAGWLDDLAAIPHLRRLRLHSRLPVVLPERISESLAHLLTASRL 59 >gi|118478814|ref|YP_895965.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis str. Al Hakam] gi|196044540|ref|ZP_03111775.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus 03BB108] gi|225865551|ref|YP_002750929.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus 03BB102] gi|118418039|gb|ABK86458.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis str. Al Hakam] gi|196024575|gb|EDX63247.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus 03BB108] gi|225786709|gb|ACO26926.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus 03BB102] Length = 338 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|47568929|ref|ZP_00239621.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus G9241] gi|47554413|gb|EAL12772.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus G9241] Length = 338 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|196038233|ref|ZP_03105542.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus NVH0597-99] gi|196030641|gb|EDX69239.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus NVH0597-99] Length = 338 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|296504074|ref|YP_003665774.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis BMB171] gi|296325126|gb|ADH08054.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis BMB171] Length = 338 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L K+++ L I V+ + Sbjct: 77 PLL--RRGLPKLIERLNKIDGVEDI 99 >gi|218904693|ref|YP_002452527.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820] gi|228928618|ref|ZP_04091654.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|218538124|gb|ACK90522.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820] gi|228830937|gb|EEM76538.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 338 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|325856357|ref|ZP_08172073.1| tRNA methylthiotransferase YqeV [Prevotella denticola CRIS 18C-A] gi|325483541|gb|EGC86513.1| tRNA methylthiotransferase YqeV [Prevotella denticola CRIS 18C-A] Length = 477 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C +C G + ++S E A E++ TG Sbjct: 184 RTRYFLKVQDGCSYFCTYCTIPYARGFSRNPTIASLVSQAEEA-----AHEGGREIVLTG 238 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GD + +R ++K L ++ ++ R S ++P I+ ELI ++ Sbjct: 239 VNIGDFGETTGERFLDLVKALDRVEGIRRYRISS----LEPDLIDDELIAYCAQSR---A 291 Query: 209 IAIHA 213 H Sbjct: 292 FMPHF 296 >gi|288555683|ref|YP_003427618.1| RNA modification enzyme, MiaB family [Bacillus pseudofirmus OF4] gi|288546843|gb|ADC50726.1| RNA modification enzyme, MiaB family [Bacillus pseudofirmus OF4] Length = 449 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + + A ++ E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKDVIKQATQLVEA--GYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L + ++ +R S ++ ++ E+I+ + + K Sbjct: 199 TGGYGED---LKDYSLARLLEDLEQVDGLKRIRISS----IEASQLTDEVIEVIDRSEK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|49478276|ref|YP_037649.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49329832|gb|AAT60478.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 338 Score = 47.4 bits (112), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|229031224|ref|ZP_04187231.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271] gi|228730091|gb|EEL81064.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271] Length = 338 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|168179650|ref|ZP_02614314.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum NCTC 2916] gi|168184928|ref|ZP_02619592.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum Bf] gi|237795372|ref|YP_002862924.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum Ba4 str. 657] gi|259495862|sp|C3KXJ8|MOAA_CLOB6 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|182669280|gb|EDT81256.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum NCTC 2916] gi|182672020|gb|EDT83981.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum Bf] gi|229263442|gb|ACQ54475.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum Ba4 str. 657] Length = 319 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 71/164 (43%), Gaps = 22/164 (13%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E ++ + ++ ++ + + ++ FTGG+PLIL Sbjct: 14 VSVTDRCNLRCVYCMPPEGIIKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 + + K++ I ++ + + + ++++ LK+AG + I + Sbjct: 73 KN--IDKLIYNTSKISSIKDIAMTTNAI------LLEDMVEELKKAGLK-RVNISLDSLK 123 Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E + + +I + + G+ + +V++KGINDD Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMRPIKINTVIMKGINDD 167 >gi|206969370|ref|ZP_03230325.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134] gi|206736411|gb|EDZ53569.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134] Length = 338 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L K+++ L I V+ + Sbjct: 77 PLL--RRGLPKLIERLNKIDGVEDI 99 >gi|146351232|ref|YP_001210459.1| molybdenum cofactor biosynthesis protein A [Arthrobacter nitroguajacolicus] gi|146218796|emb|CAL09868.1| putative MoaA-like protein [Arthrobacter nitroguajacolicus] Length = 376 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 44/190 (23%), Positives = 77/190 (40%), Gaps = 36/190 (18%) Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 G+V RY R L L C + C +C E M K V+S+++ + + Sbjct: 33 GLVDRYGRRATDMRLSLTDKCNLRCTYCMPAEGMEWLSKQAVMSAEEIQRIVRVGVHFLG 92 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELI 197 + E+ TGG+PL+ + L ++ +LR H +PI + + Sbjct: 93 VRELRLTGGEPLVRAD--LLDIISSLRQA--------HPELPIS----MTTNGIGLDKKA 138 Query: 198 QCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGI 247 LK AG + +++ + H F++ AG+ + +VL++GI Sbjct: 139 AGLKAAGLSRINVSLDSLHEETFAQLTRRPFLAKVLAGVDAAWAAGLGPVKINAVLMRGI 198 Query: 248 ND--DPEILA 255 ND P +LA Sbjct: 199 NDVESPALLA 208 >gi|75762416|ref|ZP_00742285.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228902038|ref|ZP_04066203.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis IBL 4222] gi|74490091|gb|EAO53438.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228857624|gb|EEN02119.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis IBL 4222] Length = 340 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 20 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L K+++ L I V+ + Sbjct: 79 PLL--RRGLPKLIERLHKIDGVEDI 101 >gi|228985250|ref|ZP_04145415.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774545|gb|EEM22946.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 337 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 68/167 (40%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G+ + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGADYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K+++ L I+ ++ + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LPKLIERLAKIEGIKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ + + AG+ + V+ KG+ND Sbjct: 129 AIEDYVFQKINGRNVSTKPVLKGMEEAKAAGLEVKVNMVVKKGMNDS 175 >gi|218234531|ref|YP_002368381.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264] gi|218162488|gb|ACK62480.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264] Length = 338 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L K+++ L I V+ + Sbjct: 77 PLL--RRGLPKLIERLNKIDGVEDI 99 >gi|56478522|ref|YP_160111.1| molybdenum cofactor biosynthesis protein A [Aromatoleum aromaticum EbN1] gi|56314565|emb|CAI09210.1| Molybdenum cofactor biosynthesis protein A [Aromatoleum aromaticum EbN1] Length = 359 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 75/185 (40%), Gaps = 30/185 (16%) Query: 85 PLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAAL 135 P G + DR + + + C C +C R + G+ + +LS ++ Sbjct: 23 PTDGPLKDRRDRAVQDLRISVTDRCNFRCIYCMPRSVFGADYPFLPRKELLSFEEITRIA 82 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195 + ++ TGG+PL+ K ++ +++ L I V+ L + + P+ Sbjct: 83 RRF-ATRGVRKIRITGGEPLL--RKHVENLIEMLAQIPDVE-LTLTTNGV------LLPK 132 Query: 196 LIQCLKEAGK-PVYIAIHA---------NHPYEFSEEAIAAISRLANAGI-ILLSQSVLL 244 + + LK+AG V I++ A N + I+ +AG+ + V+ Sbjct: 133 MARTLKDAGLDRVTISLDAIDDPTFRLMNDADFPVAAVLEGIAAAKDAGLGPIKVNMVVK 192 Query: 245 KGIND 249 +G+ND Sbjct: 193 RGVND 197 >gi|291087896|ref|ZP_06347812.2| radical SAM domain protein [Clostridium sp. M62/1] gi|291073644|gb|EFE11008.1| radical SAM domain protein [Clostridium sp. M62/1] Length = 322 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 39/183 (21%), Positives = 73/183 (39%), Gaps = 27/183 (14%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSS 128 E E+ + +N +GIV+R P ++++ C C FC M ++ V S Sbjct: 22 ELENRLKENRKMKYEGIVYRPPSEARSLIVQVTIGCAHNTCTFC---NMYKAKDFRVRSM 78 Query: 129 KDTEAALAYIQEKSQ----IWEVIFTGGDPLILSHKRLQKVLKTLRYI-KH-VQILRFHS 182 + L + + +V GD L+L ++L +L +R + + V++ + + Sbjct: 79 DEIMEDLR--EAHDGYGAYVQKVFLADGDALVLQTEKLLAILDAVRELFPNCVRVASYGT 136 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANA 233 I+ R + E ++ LKEAG + + E + E A +L Sbjct: 137 AQDIL---RKSEEELRQLKEAGLGIVYVGAESGDDEILREINKGVTARELKEAGQKLKRC 193 Query: 234 GII 236 GI Sbjct: 194 GIQ 196 >gi|257095940|ref|YP_003169581.1| nitrogenase cofactor biosynthesis protein NifB [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257048464|gb|ACV37652.1| nitrogenase cofactor biosynthesis protein NifB [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 505 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 66/222 (29%), Gaps = 61/222 (27%) Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------M 117 + + P ED H Y R+ + + C + C +C R+ Sbjct: 36 RARVQDHPCYSED-------------AHHYFARMHVAVAPACNIQCHYCNRKYDCANESR 82 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR--------------- 161 G + + LA Q+ + G GDPL + Sbjct: 83 PGVVSEVLTPDQAVRKTLAVAATIPQMSVLGIAGPGDPLANPERTFETFRQLALKAPDIK 142 Query: 162 ---------LQKVLKTLRY--IKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPV 207 L ++ L I HV + + VDP RI P + + Sbjct: 143 LCVATNGLVLPDYVEELARYNIDHV-TITIN----CVDPAIGARIYPWIFWKNRRVFGHE 197 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 AI + + L GI++ SVL+ G+ND Sbjct: 198 AAAI-------LIAQQQKGLEMLTARGILVKVNSVLIPGVND 232 >gi|225018723|ref|ZP_03707915.1| hypothetical protein CLOSTMETH_02673 [Clostridium methylpentosum DSM 5476] gi|224948451|gb|EEG29660.1| hypothetical protein CLOSTMETH_02673 [Clostridium methylpentosum DSM 5476] Length = 436 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 40/163 (24%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF ++ + ++ D + + F G+ + L Sbjct: 79 LMDKQRSCKNKCIFCFIDQLPKGMRKSLYFKDDDDR-------------LSFLFGNYITL 125 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-PEL-IQCLKEAGKPVYIAIHANH 215 ++ + + I + LR P+ PEL ++ +K Sbjct: 126 TN-----ITEE--EIDRIIKLRI---SPVNISVHTTNPELRVRMMKNPR----------- 164 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 + +++ I +LA+AGI L Q VL GIND E+ +L Sbjct: 165 ----AGDSLRFIKKLADAGIALNCQLVLCPGINDGAELERSLR 203 >gi|218898660|ref|YP_002447071.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842] gi|218544787|gb|ACK97181.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842] Length = 338 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L K+++ L I V+ + Sbjct: 77 PLL--RRGLPKLIERLHKIDGVEDI 99 >gi|229174229|ref|ZP_04301763.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus MM3] gi|228609247|gb|EEK66535.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus MM3] Length = 338 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|226223665|ref|YP_002757772.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes Clip81459] gi|254823680|ref|ZP_05228681.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes FSL J1-194] gi|254853066|ref|ZP_05242414.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes FSL R2-503] gi|254992565|ref|ZP_05274755.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes FSL J2-064] gi|255521212|ref|ZP_05388449.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes FSL J1-175] gi|259495866|sp|C1L1W8|MOAA_LISMC RecName: Full=Molybdenum cofactor biosynthesis protein A gi|225876127|emb|CAS04833.1| Putative molybdenum cofactor biosynthesis protein A [Listeria monocytogenes serotype 4b str. CLIP 80459] gi|258606413|gb|EEW19021.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes FSL R2-503] gi|293592902|gb|EFG00663.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes FSL J1-194] Length = 333 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LK+AG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKDAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHADRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170 >gi|317051390|ref|YP_004112506.1| MiaB-like tRNA modifying enzyme YliG [Desulfurispirillum indicum S5] gi|316946474|gb|ADU65950.1| MiaB-like tRNA modifying enzyme YliG [Desulfurispirillum indicum S5] Length = 440 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 43/193 (22%), Positives = 71/193 (36%), Gaps = 30/193 (15%) Query: 57 ARQFIPQKEELNILPEEREDPIGDN------NHSPLKGIVHRYPDRIL--------LKLL 102 RQ +P+ + E + IGD N +P + +R+L LK+ Sbjct: 90 LRQELPEVDIFIDTKESSMESIGDQLSRRLVNFTPQDHLEALPGERLLTTPSYMAYLKIA 149 Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILS 158 C C +C + G + +V K A S + E++ D L L Sbjct: 150 EGCSNTCTYCVIPRIRGPYQ-SVPQEKLVSEARE--LAASGVRELVLISQDSTEYGLDLY 206 Query: 159 HKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP 216 KR L +L L I+++ +R V P + ELI+ + K Y+ I H Sbjct: 207 GKRSLAPLLAELAKIENLHWIR----VLYTYPNHFDDELIETIAREPKICKYVDIPFQH- 261 Query: 217 YEFSEEAIAAISR 229 S + ++R Sbjct: 262 --MSNSVLKRMNR 272 >gi|78189217|ref|YP_379555.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium chlorochromatii CaD3] gi|78171416|gb|ABB28512.1| Nitrogenase cofactor biosynthesis protein NifB [Chlorobium chlorochromatii CaD3] Length = 423 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 43/217 (19%), Positives = 76/217 (35%), Gaps = 55/217 (25%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE----KSQIWEVI 148 RI L + C + C +C R+ ++ ++SK + AL Y+ + I V Sbjct: 20 GRIHLPVAPKCNIQCNYCSRKFDCMNENRPGVTSKVLSPQQALYYLDQAMELSPNIAVVG 79 Query: 149 FTG-GDPLILSHKRLQK------------------------VLKTLRY--IKHVQILRFH 181 G GDP + ++ + L + HV + + Sbjct: 80 IAGPGDPFANPDETMETLRLVRAKYPEMLLCVATNGLDLLPYIDELARLQVSHV-TITIN 138 Query: 182 SRVPIVDPQRINPELIQCLK-----EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 +DP+ I E+ ++ GK + N+ E A+ RL G+ Sbjct: 139 ----AIDPE-IGQEIYAWVRYNKKMYRGKDAAKVL-INNQLE-------ALKRLKEVGVT 185 Query: 237 LLSQSVLLKGIND-DPEILANLMRTFVE--LRIKPYY 270 S+++ GIND +A+ + L PYY Sbjct: 186 AKVNSIIIPGINDAHVITVASKVAELGADILNCLPYY 222 >gi|206975468|ref|ZP_03236381.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus H3081.97] gi|222097023|ref|YP_002531080.1| molybdenum cofactor biosynthesis protein a [Bacillus cereus Q1] gi|206746370|gb|EDZ57764.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus H3081.97] gi|221241081|gb|ACM13791.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus Q1] Length = 338 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|315506786|ref|YP_004085673.1| radical sam domain protein [Micromonospora sp. L5] gi|315413405|gb|ADU11522.1| Radical SAM domain protein [Micromonospora sp. L5] Length = 768 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 12/123 (9%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEKSQIWE-----VIF 149 +LK+ C + C C+ E + ++ + A I E + + VI Sbjct: 14 VLKVHARCDLACDHCYVYEHADQSWRRRPVRMTPEVLRTAAGRIAEHAAAHDLPDVTVIL 73 Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GG+PL+L +RL +VL LR I V LR + V ++ L L E V Sbjct: 74 HGGEPLLLGAERLGEVLADLRRVIDPVTRLRLGMQTNGVL---LSERLCDLLAEHDVAVG 130 Query: 209 IAI 211 +++ Sbjct: 131 VSL 133 >gi|167037275|ref|YP_001664853.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040032|ref|YP_001663017.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp. X514] gi|300914120|ref|ZP_07131436.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp. X561] gi|307724644|ref|YP_003904395.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp. X513] gi|320115692|ref|YP_004185851.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166854272|gb|ABY92681.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp. X514] gi|166856109|gb|ABY94517.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|300889055|gb|EFK84201.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp. X561] gi|307581705|gb|ADN55104.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter sp. X513] gi|319928783|gb|ADV79468.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 317 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 75/166 (45%), Gaps = 26/166 (15%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E + +L +++ + I + I +V FTGG+PL+ Sbjct: 14 VSVTDRCNLRCIYCMPEEGIPKKDHNEILRNEEILKIIR-ISAELGIKKVRFTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213 K ++ ++ IK ++ + +++ E+ LKEAG K V I++ + Sbjct: 72 -RKGIENIIYETSKIKGIEDIALTTNGTKL---------YEMADTLKEAGLKRVNISLDS 121 Query: 214 ---NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 + + ++ AI + + G+ + +V++KGINDD Sbjct: 122 LKKDRYRMITRLGNIDDVFRAIDKSLSIGLEPVKINTVVIKGINDD 167 >gi|257064532|ref|YP_003144204.1| predicted Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] gi|256792185|gb|ACV22855.1| predicted Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] Length = 384 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 70/182 (38%), Gaps = 32/182 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKG--TVLSSKDTEAALAYIQEKSQIWE----VIFTGG 152 LL C C+ C+ G + +S + + L+ I++ + + + +GG Sbjct: 10 WHLLDDCDQRCKHCYI--FSGDENEELNRMSFEQMQQTLSNIEDFCETFGREPYLYISGG 67 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-- 210 DP++ L L + +RF + +P + E+ + L ++G Y Sbjct: 68 DPILHPD---FWNLMDLLK---SKGIRF---TIMGNPFHLTDEVCERLHDSGCVRYQMSI 118 Query: 211 -----IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTFV 262 H P + E +A I LA GI S+++ ++D + L ++ V Sbjct: 119 DGNRQTHDWFRKPGSYD-ETLARIPMLARHGIR----SIIMTTVSDVNAAELPEIIDAVV 173 Query: 263 EL 264 E Sbjct: 174 EA 175 >gi|313668419|ref|YP_004048703.1| hypothetical protein NLA_11150 [Neisseria lactamica ST-640] gi|313005881|emb|CBN87337.1| conserved hypothetical protein [Neisseria lactamica 020-06] Length = 369 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 8/96 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIWE----V 147 D +LLK+ C + C +C+ + +LS K + + + + Sbjct: 3 DTVLLKVASRCNLNCTYCYVYHLGDDGWKDNPKLLSEKSIDDIEKSLFDLYSFQGKSFAI 62 Query: 148 IFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHS 182 + GG+P +L RL+ +LK LR + + + Sbjct: 63 VLHGGEPFLLPKHRLEYLLKKLRHRLPEYTTVSIQT 98 >gi|261400665|ref|ZP_05986790.1| putative radical SAM [Neisseria lactamica ATCC 23970] gi|269209574|gb|EEZ76029.1| putative radical SAM [Neisseria lactamica ATCC 23970] Length = 369 Score = 47.0 bits (111), Expect = 0.004, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 39/96 (40%), Gaps = 8/96 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIWE----V 147 D +LLK+ C + C +C+ + +LS K + + + + Sbjct: 3 DTVLLKVASRCNLNCTYCYVYHLGDDGWKDNPKLLSEKSIDDIEKSLFDLYSFQGKSFAI 62 Query: 148 IFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHS 182 + GG+P +L RL+ +LK LR + + + Sbjct: 63 VLHGGEPFLLPKHRLEYLLKKLRHRLPEYTTVSIQT 98 >gi|217960969|ref|YP_002339537.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187] gi|217063865|gb|ACJ78115.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187] Length = 338 Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKIDGVEDI 99 >gi|302874325|ref|YP_003842958.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans 743B] gi|307689408|ref|ZP_07631854.1| RNA modification enzyme, MiaB family protein [Clostridium cellulovorans 743B] gi|302577182|gb|ADL51194.1| RNA modification enzyme, MiaB family [Clostridium cellulovorans 743B] Length = 433 Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 23/129 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R LK+ C +C +C + SK+ E + + + E+I +G Sbjct: 141 KTRAFLKVQDGCNRFCSYCLI-----PYARGAVCSKNPETIIDEVNKLADNGFKEIILSG 195 Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 D + K L +++ + I ++ +R S V+P+ E+I+ + Sbjct: 196 IHIASYGVD--LEERKTLMDIIEEIHKINGIKRIRIGS----VEPRFFTDEVIEKMASME 249 Query: 205 KPVYIAIHA 213 K + H Sbjct: 250 K---MCPHF 255 >gi|167630503|ref|YP_001681002.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1] gi|167593243|gb|ABZ84991.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1] Length = 446 Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 31/151 (20%), Positives = 52/151 (34%), Gaps = 14/151 (9%) Query: 57 ARQFIPQKEELNILPEEREDPIGD----NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 R I E + E + + D L R R +K+ C +YC +C Sbjct: 105 RRSAIVDLVEEHRRSGETVNTVYDSCRIERFEELPAAPERSRARATIKIQDGCDLYCTYC 164 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-PLILSH--KRLQKVLKTL 169 G + + E A E++ +G S L K++ L Sbjct: 165 IIPYARGPVRSRRI-ESVVEEATR--LTGEGFKEIVLSGIHLGAYGSDFNADLAKLIVEL 221 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 I ++ +R S V+PQ PEL++ + Sbjct: 222 CRIPGLRRIRVGS----VEPQEFTPELLEAV 248 >gi|149193779|ref|ZP_01870877.1| MiaB-like tRNA modifying enzyme [Caminibacter mediatlanticus TB-2] gi|149135732|gb|EDM24210.1| MiaB-like tRNA modifying enzyme [Caminibacter mediatlanticus TB-2] Length = 405 Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 18/159 (11%) Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 KEE++ + + +GD + K + + +K+ C C +C ++ G Sbjct: 96 KEEIDKFLDFKGINLGDFDFVNKKIVESFDKTKAFIKIQEGCDFECAYCIIPKVRG---- 151 Query: 124 TVLSSKDTEA--ALAYIQ--EKSQIWEVIFTGGDPLIL---SHKRLQKVLKTLRYIKHVQ 176 SS+ E L I+ + I E + TG + ++ L K+++ + I+ V+ Sbjct: 152 ---SSRSIEESLILEEIKKLRDNGISEFVLTGINMGSYGKDTNTSLSKLIEKISNIRGVK 208 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 +R S ++P +I+ LI+ + ++ I H Sbjct: 209 RIRLGS----LEPSQIDDRLIELTQNGILEKHLHIALQH 243 >gi|220929654|ref|YP_002506563.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum H10] gi|219999982|gb|ACL76583.1| RNA modification enzyme, MiaB family [Clostridium cellulolyticum H10] Length = 454 Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 14/128 (10%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 ++ R LK+ C +C +C G + D + ++ E + E++ Sbjct: 159 TYKERTRAYLKIQEGCSQFCSYCIIPYARGPIRSR--KPDDIIEEVKHLAESGFL-EIVL 215 Query: 150 TGGDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 TG + L ++K I ++ +R S ++P I E + + K Sbjct: 216 TGIHLASFGREIKDTNLLDIIKKTHSIDGIKRIRLGS----LEPTTITEEFVDAVGRLPK 271 Query: 206 PVYIAIHA 213 + H Sbjct: 272 ---LCPHF 276 >gi|254000035|ref|YP_003052098.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp. SIP3-4] gi|253986714|gb|ACT51571.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp. SIP3-4] Length = 336 Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 77/177 (43%), Gaps = 20/177 (11%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R D I L + C C +C +M + VLS ++ + I + + +V TG Sbjct: 17 RKVDYIRLSITDRCDFRCVYCMAEDMTFLPRDEVLSLEECARLVK-IFVQMGVSKVRITG 75 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210 G+PL+ + + + + + ++ ++ L V + ++ + L++AG K + I+ Sbjct: 76 GEPLVRKNAQ--WLFEEIGHLPGLKEL-----VVTTNGSQLEHQ-AAALRQAGVKRINIS 127 Query: 211 IHANHPYEFSEEAI--------AAISRLANAGII-LLSQSVLLKGINDDPEILANLM 258 + + + F + I +AG + SV+++G+NDD E L L Sbjct: 128 VDSLNADRFRKITRVGDLSKVLRGIQAAKDAGFDNIKLNSVIMRGVNDD-EALDLLR 183 >gi|319790216|ref|YP_004151849.1| Radical SAM domain protein [Thermovibrio ammonificans HB-1] gi|317114718|gb|ADU97208.1| Radical SAM domain protein [Thermovibrio ammonificans HB-1] Length = 376 Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 36/201 (17%), Positives = 74/201 (36%), Gaps = 36/201 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + ++ C + C C R + S++D + L I + S+ V+ TGG+ Sbjct: 9 PKWVAWEITRRCNLQCIHC-RSASTMESEQGDFSTEDGKKLLDDIAKLSKPT-VVLTGGE 66 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRV-----PIVDPQRINPELIQCLKEAG-KPV 207 PL L++ + L + +++ + ++ E+ + +KE G + V Sbjct: 67 PL------LREDIWELAE--------YGTKLGFRMCIATNGTLVDDEVCRKMKEVGIRMV 112 Query: 208 YIAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANL 257 +++ + P E ++ A GI L S K + + N+ Sbjct: 113 SLSLDGSTP-EIHDDFRKQPGAYEGVIKAAELFNKHGIPFLINSSFTK---RNAHDIPNV 168 Query: 258 MRTFVELRIKPYYLHHPDLAA 278 + EL K +Y+ Sbjct: 169 YKKARELGAKAWYMFLVLPVG 189 >gi|327314071|ref|YP_004329508.1| tRNA methylthiotransferase YqeV [Prevotella denticola F0289] gi|326945694|gb|AEA21579.1| tRNA methylthiotransferase YqeV [Prevotella denticola F0289] Length = 450 Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C +C G + ++S E A E++ TG Sbjct: 157 RTRYFLKVQDGCSYFCTYCTIPYARGFSRNPTIASLVSQAEEA-----AHEGGREIVLTG 211 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GD + +R ++K L ++ ++ R S ++P I+ ELI ++ Sbjct: 212 VNIGDFGETTGERFLDLVKALDRVEGIRRYRISS----LEPDLIDDELIAYCAQSR---A 264 Query: 209 IAIHA 213 H Sbjct: 265 FMPHF 269 >gi|110637727|ref|YP_677934.1| GTP cyclohydrolase subunit MoaA [Cytophaga hutchinsonii ATCC 33406] gi|110280408|gb|ABG58594.1| GTP cyclohydrolase subunit MoaA [Cytophaga hutchinsonii ATCC 33406] Length = 317 Score = 47.0 bits (111), Expect = 0.005, Method: Composition-based stats. Identities = 35/210 (16%), Positives = 71/210 (33%), Gaps = 23/210 (10%) Query: 99 LKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L VC + C +C + VL+ ++ + + I + + + TGG+PL+ Sbjct: 20 VSLTAVCNMACVYCVTPGAIHTPSAEKVLTVEEYLSIIKNIHSQVGLKTIRLTGGEPLLF 79 Query: 158 SH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC---LKEAGKPVYIAIHA 213 L K +K L I +++ ++ V + L L V+ I Sbjct: 80 KELPVLIKGIKAL-GITDIKLTTNGLKLLSVLDALVEAGLTSINISLDALDPAVFRNITK 138 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND----------DPEILANLMRTFVE 263 N + I + GI + +V+L+G+ND + ++ Sbjct: 139 NQDLR---AVLDGIEAARHKGIAIKINTVVLRGVNDHQIIPLLEYASARNIPIRFLELMK 195 Query: 264 LRIKPY----YLHHPDLAAGTSHFRLTIEE 289 + Y Y D ++ + Sbjct: 196 MGYLHYNESDYFFGMDDIVEKISSVTSVAK 225 >gi|323345215|ref|ZP_08085438.1| 2-methylthioadenine synthetase [Prevotella oralis ATCC 33269] gi|323093329|gb|EFZ35907.1| 2-methylthioadenine synthetase [Prevotella oralis ATCC 33269] Length = 452 Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C G + ++S E A + E E++ TG Sbjct: 160 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTIASL-VEQARQAVAEGG--KEIVLTGVN 216 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + +++R ++K L ++ V+ R S ++P ++ ELI+ + Sbjct: 217 IGDFGVTTNERFIDLVKALDKVEGVKRYRISS----LEPDLLDDELIEYCARSR---AFM 269 Query: 211 IHA 213 H Sbjct: 270 PHF 272 >gi|170760513|ref|YP_001787335.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A3 str. Loch Maree] gi|226704814|sp|B1KU20|MOAA_CLOBM RecName: Full=Molybdenum cofactor biosynthesis protein A gi|169407502|gb|ACA55913.1| molybdenum cofactor biosynthesis protein A [Clostridium botulinum A3 str. Loch Maree] Length = 319 Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 70/164 (42%), Gaps = 22/164 (13%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E +V + ++ ++ + + ++ FTGG+PLIL Sbjct: 14 VSVTDRCNLRCVYCMPPEGIVKKEHDNIMRYEEIFKVVKS-ASLLGVNKIRFTGGEPLIL 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 + + K++ I ++ + + + + ++ LK+AG + I + Sbjct: 73 KN--IDKLIYNTSKISSIKDIAMTTNAI------LLEDRVEELKKAGLK-RVNISLDSLK 123 Query: 218 E-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E + + +I + + G+ + +V++KGINDD Sbjct: 124 EDRFKSITRGGDINKVFKSIEKSLSIGMRPIKINTVIMKGINDD 167 >gi|313202011|ref|YP_004040669.1| molybdenum cofactor biosynthesis protein a [Methylovorus sp. MP688] gi|312441327|gb|ADQ85433.1| molybdenum cofactor biosynthesis protein A [Methylovorus sp. MP688] Length = 336 Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 17/168 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R D I L + C C +C +M + VLS ++ + I + + +V TG Sbjct: 17 RKVDYIRLSITDRCDFRCVYCMAEDMTFLPRDEVLSLEECARLVK-IFVQMGVSKVRITG 75 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+PL+ + + + + + ++ ++ L V + ++ + K K + I++ Sbjct: 76 GEPLVRKNAQ--WLFEEIGHLPGLKEL-----VVTTNGSQLEHQAAALRKAGVKRINISV 128 Query: 212 HANHPYEFSEEAI--------AAISRLANAGII-LLSQSVLLKGINDD 250 + + F I AG + SV+++G+NDD Sbjct: 129 DSLNAERFRNITRVGDLSKVLRGIQAAKEAGFDNIKLNSVIMRGVNDD 176 >gi|294345246|emb|CBL51476.1| conserved radical SAM domain containing hypothetical protein [Thermus thermophilus] Length = 375 Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 43/222 (19%), Positives = 81/222 (36%), Gaps = 39/222 (17%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 RYP + ++ + C + CR C M G LS+++ + + ++ TG Sbjct: 8 RYPYLVAWEVTNACLLACRHCRASAMPHPLPGE-LSTEEGLRLIEEVATYRPKPLLLLTG 66 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQCLKEAGK-PV 207 GDPL L +++ R +V P P + E++ LKEAG + Sbjct: 67 GDPLAREDLFL--LMERARA--------LGLKVGLTPAATP-LLTREMVFRLKEAGVTRL 115 Query: 208 YIAIHANHPYE---FSEEA------IAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 +++ P F EA + A+S AG+ + + + ++ + L Sbjct: 116 ALSLDGASPESHDAFRGEAGTFQRTLEALSWAKEAGLPTQVNTTVTR---ENWPEIQALP 172 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 E + + L F + + G ++ L K Sbjct: 173 DLLAEKGVVLWSLF----------FLVPVGRG-ALLKQLSAK 203 >gi|218780597|ref|YP_002431915.1| molybdenum cofactor biosynthesis protein A [Desulfatibacillum alkenivorans AK-01] gi|218761981|gb|ACL04447.1| molybdenum cofactor biosynthesis protein A [Desulfatibacillum alkenivorans AK-01] Length = 315 Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 86/256 (33%), Gaps = 59/256 (23%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E + VLS ++ A + I +V TGG+PL+ Sbjct: 1 MSVTDRCNLRCFYCVPEEGLPFLGHKDVLSYEEITAIVQAGVRH-GIQKVRITGGEPLV- 58 Query: 158 SHKRLQKVLKTLRYIKHVQIL-------RFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 K +++++ ++ + ++ L R S + LK+AG Sbjct: 59 -RKGIEELVASISALPEIKDLAMTTNGVRLAS-------------MAHDLKKAGLHRVNV 104 Query: 211 -------------IHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD--PEIL 254 NH E I +AG+ + V + G+ND + Sbjct: 105 SLDSMKPEVFEKITGRNHCQE----VKEGIEAALDAGLTPVKINVVAVAGVNDSEFADFA 160 Query: 255 ANLMRTFVELRIKPYYLHHPDLAAGTSHF----RLTIEEGQKIVA-SLKEKIS----G-L 304 M V +R Y H+ ++ E ++I+ L G L Sbjct: 161 KLTMDKPVSVRFIEY-----MPIGKNMHWAEDRSISSREIREIIEKQLGPMTPVTEHGPL 215 Query: 305 CQPFYILDLPGGYGKV 320 P LPG G++ Sbjct: 216 DGPARRFSLPGAQGEI 231 >gi|82751179|ref|YP_416920.1| hypothetical protein SAB1448c [Staphylococcus aureus RF122] gi|82656710|emb|CAI81137.1| conserved hypothetical protein [Staphylococcus aureus RF122] Length = 448 Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L I ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGQD---LKDYNLAQLLRDLEMINGLERIRISS----IEASQLTDEVIDVLERSTK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|325960236|ref|YP_004291702.1| molybdenum cofactor biosynthesis protein A [Methanobacterium sp. AL-21] gi|325331668|gb|ADZ10730.1| molybdenum cofactor biosynthesis protein A [Methanobacterium sp. AL-21] Length = 320 Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 32/185 (17%), Positives = 74/185 (40%), Gaps = 36/185 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + + C V C +C +V + ++ K+ E + + ++ I ++ +GG+PLI Sbjct: 23 ISITNRCNVKCFYCHHDGIV--PQDYEMTPKEIERIVT-VAKELGIEKIRLSGGEPLIRE 79 Query: 159 HKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 ++ + I +V + + + +++ + L EAG + + + Sbjct: 80 D-----IVDMVSKIANVGFRDISLTTNGILLEKY------AEKLHEAGLT-RVNVSFDT- 126 Query: 217 YEFSEEAIAAISRL-----ANAGI---------ILLSQSVLLKGINDDPEILANLMRTFV 262 + E I++ A AGI + V++KGIND+ + ++ + Sbjct: 127 --LNPETYRFITKRDYMENAKAGIQKAVESGLNPVKVNMVVMKGINDN--EIWDMFQFCR 182 Query: 263 ELRIK 267 E Sbjct: 183 ETGAI 187 >gi|116672386|ref|YP_833319.1| radical SAM domain-containing protein [Arthrobacter sp. FB24] gi|116612495|gb|ABK05219.1| Radical SAM domain protein [Arthrobacter sp. FB24] Length = 533 Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 43/207 (20%), Positives = 85/207 (41%), Gaps = 33/207 (15%) Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q IP + + P+ + L + ++ +L ++ C + C CF Sbjct: 92 KQHIPDQA-------DNFRPVPEAYAYGLPAMQTQHTCILLQDIIEHCNLRCPTCFTSSG 144 Query: 118 VGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 Q L+ + +A LA +E ++ ++ +GG+P + L ++L+ L Sbjct: 145 PQLQGVAPLAEVLANVDARLA--RENGRLDVLMLSGGEPTLYP--HLAELLEELVARP-- 198 Query: 176 QILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHANHP-YE---------FSEEA 223 I+R + + + + EL+ L + V + + + P E + Sbjct: 199 -IVRI---MVNSNGMLMATDDELLALLAKHRDRVEVYLQYDGPSKEASIHHRGGDLTRFK 254 Query: 224 IAAISRLANAGI-ILLSQSVLLKGIND 249 AAISRL+ AG+ L+ + L G+ND Sbjct: 255 DAAISRLSEAGVFTTLTMTATL-GVND 280 >gi|301166467|emb|CBW26043.1| molybdenum cofactor biosynthesis protein A [Bacteriovorax marinus SJ] Length = 328 Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 68/167 (40%), Gaps = 17/167 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R ++ + L C + C +C + + LS + + + + + EV TG Sbjct: 25 RKIRKLRISLTDKCNLRCHYCMPLDATFMDEQRYLSVDEYAQVVEDLCKF-GLEEVRITG 83 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+PL+ K + +++ + + + + V + +L + + I++ Sbjct: 84 GEPLL--RKSFKSLVEKIGSLP---LKKIGLTTNAVLLHKYIEDLCEY---RVHHINISL 135 Query: 212 HANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250 + + F++ IS +AG+ + +VL+KG+NDD Sbjct: 136 DSLNEDRFNKITRSKNFKKVLENISLAKSAGLNIKINTVLMKGVNDD 182 >gi|302347912|ref|YP_003815550.1| Predicted Fe-S oxidoreductase [Acidilobus saccharovorans 345-15] gi|302328324|gb|ADL18519.1| Predicted Fe-S oxidoreductase [Acidilobus saccharovorans 345-15] Length = 387 Score = 46.6 bits (110), Expect = 0.005, Method: Composition-based stats. Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 32/204 (15%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTG 151 P + + CP+ C C R E + LS + + + E + + ++ FTG Sbjct: 12 KPLLVFWETTKACPLACIHC-RAEAITRPLPGELSHAEGLELVRQVAEFGRPYPILVFTG 70 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD---PQRINPELIQCLKEAGKPVY 208 GDPL S + + +++ + VP+ P R + + + +GK Sbjct: 71 GDPL--SREDIWELVDEAHSLG----------VPVAMAPSPSRALLDNLDRIA-SGKVSA 117 Query: 209 IAIHANHPY-EFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANL 257 ++I +HP E ++ AI L G+ + + +++ + L + Sbjct: 118 VSISIDHPSPEVHDKVRRYQGSWEAGVTAIRELIRRGVKVQVNTAVMR---STVDGLPGM 174 Query: 258 MRTFVELRIKPYYLHHPDLAAGTS 281 ++ +L + + + + Sbjct: 175 VKLLKDLGVDVWEVFYLVPVGRAE 198 >gi|251780327|ref|ZP_04823247.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084642|gb|EES50532.1| conserved hypothetical protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 434 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 45/127 (35%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G+ + K E + E EVI +G Sbjct: 141 KTRAFLKIQDGCNRFCTFCLIPYARGA-TCSKKPEKVIEEVKK-LAEH-GFKEVILSGIH 197 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D + + L +L+ + I + +R S ++P E+I +K K Sbjct: 198 TASYGVD--LGTDVTLISLLEDIEKIDGIDRVRIGS----IEPAFFTDEVINKIKNMKK- 250 Query: 207 VYIAIHA 213 + H Sbjct: 251 --LCPHF 255 >gi|325662160|ref|ZP_08150778.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium 4_1_37FAA] gi|331085957|ref|ZP_08335040.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium 9_1_43BFAA] gi|325471609|gb|EGC74829.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium 4_1_37FAA] gi|330406880|gb|EGG86385.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium 9_1_43BFAA] Length = 438 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 21/128 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C +C +C M G + ++ ++ + EV+ TG Sbjct: 148 HTRAYIKVQDGCNQFCTYCIIPYMRGRVRSRR--KEEVVEEVSALAAN-GYKEVVLTGI- 203 Query: 154 PLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 LS + L +++ + I+ ++ +R S ++P+ I E L K Sbjct: 204 --HLSSYGVDFEEKETLLSLIQAVHAIEGIERIRLGS----LEPRIITEEFASALSALPK 257 Query: 206 PVYIAIHA 213 I H Sbjct: 258 ---ICPHF 262 >gi|228940652|ref|ZP_04103217.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar berliner ATCC 10792] gi|228973571|ref|ZP_04134154.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228980129|ref|ZP_04140444.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis Bt407] gi|228779611|gb|EEM27863.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis Bt407] gi|228786158|gb|EEM34154.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar thuringiensis str. T01001] gi|228819031|gb|EEM65091.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar berliner ATCC 10792] Length = 340 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 20 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNEKILSFDEIERITR-IFVSLGVRKLRITGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L K+++ L I V+ + Sbjct: 79 PLL--RRGLPKLIERLNKIDGVEDI 101 >gi|148381600|ref|YP_001256140.1| putative bacteriocin biosynthesis protein [Clostridium botulinum A str. ATCC 3502] gi|148291084|emb|CAL81548.1| putative bacteriocin biosynthesis protein [Clostridium botulinum A str. ATCC 3502] Length = 430 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 7/77 (9%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 YP + ++ CP+ CR C+ + + ++LS + + L I + + I +V TGG Sbjct: 108 YPHALCWEITDYCPLNCRHCY----LPEKNNSILSRDNIDNVLE-IIDSAGIQQVQVTGG 162 Query: 153 DPLILSHKRLQKVLKTL 169 + L L+ ++ +L Sbjct: 163 EALTHP--ELEYIIDSL 177 >gi|327311467|ref|YP_004338364.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus uzoniensis 768-20] gi|326947946|gb|AEA13052.1| putative molybdenum cofactor biosynthesis protein A [Thermoproteus uzoniensis 768-20] Length = 341 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 42/228 (18%), Positives = 86/228 (37%), Gaps = 34/228 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + VC C FC G G +L++ D + + + + + TGG+PL+ Sbjct: 42 VAVNDVCNFSCIFC---HFEGQLRGVGRLLNADDYGFLVDVLSK-VGVRDYKLTGGEPLL 97 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 S + +++ + V+I + R+ + V +++H P Sbjct: 98 RSD--IVDIVRKMNR-DGVEI------SMTTNGFRLAELAEDLAAAGLRRVNVSVHTTDP 148 Query: 217 ----------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 E+ + + AG+ + +VLLKGINDD E L +L++ + Sbjct: 149 EKFSKVAGVPKEWFRRVLDGVHAAVKAGMKVKLNAVLLKGINDDRESLRSLVKLAASIGA 208 Query: 267 KPYYLHHPDLAAGTSHF---RLTIEEGQKIVASLKEKISGLCQPFYIL 311 + + G+ F R + +E +++ + +P Y Sbjct: 209 SIQLIELMPVGLGSRVFGDLRASADEVAELLEGMG------ARPAYTR 250 >gi|300087511|ref|YP_003758033.1| radical SAM domain-containing protein [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527244|gb|ADJ25712.1| Radical SAM domain protein [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 326 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 29/152 (19%), Positives = 52/152 (34%), Gaps = 17/152 (11%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 D + L + C CR C +VGS + G + A L ++ + I V TGG Sbjct: 31 DTLWLNITTRCNQSCRHC---HVVGSREAGDQMGHGILSACLELLRREPGITTVDITGGA 87 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILR-----------FHSRVPIVDPQRINPELIQCLKE 202 P + + + ++ L + ++R R P ++ L Sbjct: 88 PEL--NPLFESLVSALSEMGKRIVVRHNLTVTLDGDSVGGRSLAHLPGFFAAHRVEILAS 145 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 A ++I ++ RL +AG Sbjct: 146 LPSCQPTVTDAIRGRRVFAKSIESLKRLRDAG 177 >gi|326941284|gb|AEA17180.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar chinensis CT-43] Length = 338 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 20/85 (23%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNEKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L K+++ L I V+ + Sbjct: 77 PLL--RRGLPKLIERLNKIDGVEDI 99 >gi|71907086|ref|YP_284673.1| nitrogenase cofactor biosynthesis protein NifB [Dechloromonas aromatica RCB] gi|71846707|gb|AAZ46203.1| Nitrogenase cofactor biosynthesis protein NifB [Dechloromonas aromatica RCB] Length = 500 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 65/193 (33%), Gaps = 42/193 (21%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H Y R+ + + C + C +C R+ G + + + LA E Q Sbjct: 51 AHHYFARMHVAVAPACNIQCNYCNRKYDCSNESRPGVVSELLTPDQAIKKVLAVAAEIPQ 110 Query: 144 IWEVIFTG-GDPLILSHK------------------------RLQKVLKTLRY--IKHVQ 176 + + G GDPL + L + + + I HV Sbjct: 111 MTVLGIAGPGDPLANPGRTFETFEQLSARAPDIKLCVSTNGLNLPQYVDRIAQHNIDHV- 169 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII 236 + + VDP+ + ++ + K + E+ + L + GI+ Sbjct: 170 TITIN----CVDPE-VGAKIYPWIYWENKRI---TGVEGARILIEQQQKGLQMLTDRGIL 221 Query: 237 LLSQSVLLKGIND 249 + SVL+ G+ND Sbjct: 222 VKVNSVLIPGVND 234 >gi|322379439|ref|ZP_08053809.1| Radical SAM [Helicobacter suis HS1] gi|322380950|ref|ZP_08055016.1| MiaB-like rRNA/tRNA modification protein [Helicobacter suis HS5] gi|321146622|gb|EFX41456.1| MiaB-like rRNA/tRNA modification protein [Helicobacter suis HS5] gi|321148148|gb|EFX42678.1| Radical SAM [Helicobacter suis HS1] Length = 419 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 67/161 (41%), Gaps = 15/161 (9%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKG-IVHRY--PDRILLKLLHVCPVYCRFCFRREMVG 119 KEE+N L +E++ ++ L ++ + R +K+ C C +C Sbjct: 99 HKEEINALLQEKQGFFHEDKQECLDQILLSNFVGKTRAFVKIQEGCDFRCSYCIIP--TV 156 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR---LQKVLKTLRYIKHVQ 176 + L+ + + + + + EV+ TG + R L ++ + + ++ Sbjct: 157 RGQSRSLNQDHVLKQIEMLSQ-AGVLEVVLTGTNVGSYGLDRGTNLAHLILKIADLTPIK 215 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANH 215 +R S ++P +IN E ++ L + ++IA+ +H Sbjct: 216 RVRIGS----LEPSQINTEFLELLDHPILERHLHIALQHSH 252 >gi|326791229|ref|YP_004309050.1| RNA modification enzyme, MiaB family [Clostridium lentocellum DSM 5427] gi|326541993|gb|ADZ83852.1| RNA modification enzyme, MiaB family [Clostridium lentocellum DSM 5427] Length = 435 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 15/118 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTG 151 R+ +K+ C YC +C + + S+ E + + + + E+I TG Sbjct: 144 RTRVYVKVQEGCNNYCSYC-----IIPYTRGKIRSRKEEQVVEEVTKLVGLGFKEIILTG 198 Query: 152 GDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L L + L ++LK + I+ V+ +R S P+ I E I LKE K Sbjct: 199 IHVLAYGKDLGNTDLIQLLKRVHEIEGVERIRMSSIEPVA----ITDEFIYALKEMPK 252 >gi|118443956|ref|YP_878198.1| tRNA modifying protein [Clostridium novyi NT] gi|238065369|sp|A0Q0P6|RIMO_CLONN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|118134412|gb|ABK61456.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium novyi NT] Length = 444 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 16/116 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154 +++ C C +C + + S+ E+ + + + E+I G D Sbjct: 147 AYIRISEGCNNLCTYC-----IIPKIRGKYRSRSIESIINEAKELANMGVKELILVGQDT 201 Query: 155 LIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 I RL ++L+ L I+ ++ +R P+ I ELI+ +K K Sbjct: 202 AIYGSDLYKENRLSQLLRELSNIEDIEWIRI----LYTYPEEITDELIEEIKNNDK 253 >gi|324327466|gb|ADY22726.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar finitimus YBT-020] Length = 338 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L + ++ L I V+ + Sbjct: 77 PLL--RRGLPQFIERLNKIDGVEDI 99 >gi|331002254|ref|ZP_08325773.1| hypothetical protein HMPREF0491_00635 [Lachnospiraceae oral taxon 107 str. F0167] gi|330411348|gb|EGG90764.1| hypothetical protein HMPREF0491_00635 [Lachnospiraceae oral taxon 107 str. F0167] Length = 456 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 38/168 (22%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q V T + Sbjct: 80 LMSDYKSCTNNCVFCFIDQMPKGMRETLYFKDD-DSRLSFLQGN----YVTLT-----NM 129 Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 ++++++ L I + H+ +P+ L++ +H Sbjct: 130 KDADIERIIRFNLAPI----NISVHT----TNPE---------LRKK------MLH---- 162 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 F+ E++ I +L + + Q V+ G ND E+ L Sbjct: 163 NRFAGESLRYIDKLYEKNVPMNGQVVMCPGYNDGEELRKTLNDLLKYA 210 >gi|323358951|ref|YP_004225347.1| molybdenum cofactor biosynthesis enzyme [Microbacterium testaceum StLB037] gi|323275322|dbj|BAJ75467.1| molybdenum cofactor biosynthesis enzyme [Microbacterium testaceum StLB037] Length = 406 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 66/163 (40%), Gaps = 19/163 (11%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + ++ C + C +C + M + ++S+ + + E+ TGG+PL+ Sbjct: 83 VSVIDKCNLRCTYCMPADGMPWLPQAQLMSADEIRRIVRVAVHSLGAEELRITGGEPLVR 142 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216 L+ ++ +R + + Q LK+AG V +++ HP Sbjct: 143 KD--LEHIIAGIRADNPDLPISLTTNAVG------LDRRAQALKDAGLNRVNVSLDTLHP 194 Query: 217 ---YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E + ++ +A + AG+ + +VLL+GIND Sbjct: 195 ETFAELTRRPHLDKVLAGLQAARAAGLGPIKINAVLLRGINDT 237 >gi|22298906|ref|NP_682153.1| molybdenum cofactor biosynthesis protein A [Thermosynechococcus elongatus BP-1] gi|22295087|dbj|BAC08915.1| molybdenum cofactor biosynthesis protein A [Thermosynechococcus elongatus BP-1] Length = 332 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 13/173 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C +C + T L+ + +A + E I V TGG+PL+ Sbjct: 36 LSITDRCNLRCMYCMPVDAAFMPPQTYLTPTEYATIVAELVE-LGIESVRLTGGEPLL-- 92 Query: 159 HKRLQKVLKTL--RYIKHVQILRFHSRVPIVDP--QRINPELIQC-LKEAGKPVYIAIHA 213 +++ L + + + R+ P + L + AI Sbjct: 93 RAEFAEIVAALVAAGVPQLSLTTNGIRLVPFLPLLAHYGVRRLNISLDSLDPQTFAAISH 152 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 H E AAI+ + G + V++ G+ND L +++ L I Sbjct: 153 GHHLE---TVKAAIATAVDQGFQVKLNMVVMAGVND--HELVSMVEYAKGLGI 200 >gi|329929025|ref|ZP_08282827.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5] gi|328937014|gb|EGG33443.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. HGF5] Length = 334 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 40/175 (22%), Positives = 71/175 (40%), Gaps = 25/175 (14%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E M ++S ++ A + + + + Sbjct: 10 GRVHDY---IRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIAAIMRVLAPM-GVSK 65 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 V TGG+PL+ L+ ++ + I+ VQ + + + P + LKEAG Sbjct: 66 VRLTGGEPLVRKD--LETLVHKIASIEGVQDISLTTNGI------MLPSKARLLKEAGLT 117 Query: 207 VYIAIHANHPYE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 I I + E + + + I AG+ + VL+KG N+D Sbjct: 118 -RINISLDSLQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNED 171 >gi|319443027|ref|ZP_07992183.1| molybdenum cofactor biosynthesis protein A [Corynebacterium variabile DSM 44702] Length = 371 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 71/195 (36%), Gaps = 35/195 (17%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L+ C + C +C E M QK +L++++ + +V FTGG+PL+ Sbjct: 45 ISLIDKCNLRCTYCMPAEGMAWLQKDRLLTAEEAVRIADLGVRIFGVRDVRFTGGEPLVR 104 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPI-------VDPQRINPELIQCLKEAGKPVYIA 210 L ++ +R R H +PI +RI+ + L V + Sbjct: 105 HD--LADIIAGVR--------RLHPEIPISITTNGIGLDKRIDDLVDAGL--TRVNVSLD 152 Query: 211 IHANHP-YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE 263 E + + I + AG+ + +VL++GIND A+L+ V Sbjct: 153 TVDREAFKELTRRDRLPQVIKGLEAAKAAGLEPVKVNAVLMRGINDTGA--ADLLEWCVT 210 Query: 264 LRIKPYYLHHPDLAA 278 + Sbjct: 211 RG------YQLRFIE 219 >gi|291563947|emb|CBL42763.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium SS3/4] Length = 441 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 25/129 (19%), Positives = 46/129 (35%), Gaps = 22/129 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152 R +K+ C +C +C G + +D E + I + E++ TG Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRRP--EDVEEEVK-ILAEEGYKEIVLTGIH 198 Query: 153 ------DPLILSHKRLQKV--LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 D + + + ++ L I ++ +RF S ++P+ I E L Sbjct: 199 LTSYGID---FKDEGIDFLTLIRRLHEIDGIERIRFGS----LEPRVITEEFASELSRLP 251 Query: 205 KPVYIAIHA 213 K I H Sbjct: 252 K---ICPHF 257 >gi|253997401|ref|YP_003049465.1| molybdenum cofactor biosynthesis protein A [Methylotenera mobilis JLW8] gi|253984080|gb|ACT48938.1| molybdenum cofactor biosynthesis protein A [Methylotenera mobilis JLW8] Length = 341 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 68/190 (35%), Gaps = 32/190 (16%) Query: 83 HSPLKGIVHRYPDRIL-----------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 + YPD+++ L + C C +C EM + VLS ++ Sbjct: 2 TEKVPTPTSNYPDKLIDQFGRQVDYIRLSITDRCDFRCTYCMAEEMTFLPRDEVLSLEEC 61 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS------RVP 185 + + + +V TGG+PL+ + + + + ++ ++ L + + Sbjct: 62 LRLVKAFVQ-LGVTKVRITGGEPLVRKNAL--WLFEEVGKLERLKELVLTTNGSQLEKQA 118 Query: 186 IVDPQ----RINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQ 240 Q RIN L E K + E + + I AG + Sbjct: 119 ASLKQAGVKRINISLDSLNSERFKKI------TRTGELDK-VLHGIQAAKQAGFDNIKLN 171 Query: 241 SVLLKGINDD 250 +VL++G NDD Sbjct: 172 TVLMRGTNDD 181 >gi|242373881|ref|ZP_04819455.1| 2-methylthioadenine synthase [Staphylococcus epidermidis M23864:W1] gi|242348435|gb|EES40037.1| 2-methylthioadenine synthase [Staphylococcus epidermidis M23864:W1] Length = 451 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQASQLV--NSGYKEIVLTGIH 201 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L I ++ +R S ++ ++ E+I+ + + K Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLDEIDGLERIRISS----IEASQLTDEVIEVIGNSNK- 253 Query: 207 VYIAIHA 213 V +H Sbjct: 254 VVRHLHV 260 >gi|134300005|ref|YP_001113501.1| radical SAM domain-containing protein [Desulfotomaculum reducens MI-1] gi|134052705|gb|ABO50676.1| Radical SAM domain protein [Desulfotomaculum reducens MI-1] Length = 330 Score = 46.6 bits (110), Expect = 0.006, Method: Composition-based stats. Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 16/106 (15%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 + C +YC C+R V +++ LS+ + + L I E +IF+GG+PL+ Sbjct: 7 TTNACNLYCEHCYRDAGVKAEEE--LSTDEGKRLLDQIAE-VGFKIMIFSGGEPLMRPD- 62 Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204 + L + LR F + + I PE+ + LKE+G Sbjct: 63 -----IYELVAHARSKGLRPVFGTNGTL-----ITPEVAKRLKESG 98 >gi|315637089|ref|ZP_07892312.1| 2-methylthioadenine synthetase [Arcobacter butzleri JV22] gi|315478625|gb|EFU69335.1| 2-methylthioadenine synthetase [Arcobacter butzleri JV22] Length = 422 Score = 46.3 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 10/125 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C + G S + + E I TG + Sbjct: 139 KSRAFIKIQEGCDFRCSYCIIPYVRGD--ARSYSEDKILEQVTTLAAN-GFGEFILTGTN 195 Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 K+ L K+LK + IK V+ +R S ++P +I+ E + + E ++ Sbjct: 196 VGSYGKKQHTSLAKLLKKMSLIKGVRRIRMGS----IEPIQIDDEFKEIINEPFMAKHLH 251 Query: 211 IHANH 215 I H Sbjct: 252 IALQH 256 >gi|254250659|ref|ZP_04943978.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia cenocepacia PC184] gi|124879793|gb|EAY67149.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia cenocepacia PC184] Length = 393 Score = 46.3 bits (109), Expect = 0.006, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 83/233 (35%), Gaps = 58/233 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154 L ++ C C +C RE G+ + SS+ A L I + ++ TGG+P Sbjct: 65 LSVIDQCNFRCGYCMPRESFGADYAFMPSSERLSFAQLEKIARAFTSLGVEKIRITGGEP 124 Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192 L+ + L+ +++ L + V + LR SRV + + Sbjct: 125 LL--RRNLEALIERLATLTTVDGKPVEIALTTNGSLLAAKARALRDAGLSRVTVSL-DAL 181 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251 + L + + +A PV + A I AG + +V+ +G+NDD Sbjct: 182 DDALFRRMSDADVPVARVL-------------AGIEAAHAAGLAPVKVNAVIERGMNDD- 227 Query: 252 EILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIEEGQKIVAS 296 + L+R F + Y G S + + ++++ Sbjct: 228 -QILPLVRHFRHTGVAVRFIEY-----MDVGGASFWSGDKVVPAARMRELIDE 274 >gi|310827222|ref|YP_003959579.1| hypothetical protein ELI_1630 [Eubacterium limosum KIST612] gi|308738956|gb|ADO36616.1| hypothetical protein ELI_1630 [Eubacterium limosum KIST612] Length = 436 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 56/174 (32%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + C C FCF +M + T+ Y+++ + + G+ + L+ Sbjct: 85 MLETRTCKNNCVFCFIDQMPPGMRETL-----------YVKDDDERLSFLL--GNYVTLT 131 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216 + L + +I+R RI P+ I++H +P Sbjct: 132 N---------LTEAEMERIVR----------YRIM------------PINISVHTTNPEL 160 Query: 217 ------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 F+ + ++ A+ GI + Q VL G ND L RT +L Sbjct: 161 RCAMLHNRFAGSIVESLRYFADNGIGMNGQIVLCPGYNDR----DELRRTLNDL 210 >gi|315924411|ref|ZP_07920633.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter alactolyticus ATCC 23263] gi|315622290|gb|EFV02249.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pseudoramibacter alactolyticus ATCC 23263] Length = 432 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 30/193 (15%), Positives = 62/193 (32%), Gaps = 30/193 (15%) Query: 17 ANLIKKEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEERED 76 + E+I +I+E+ I + + D +AR +E + D Sbjct: 80 YAQVAPEEISKIEEVDL---------ILGTAHRNRVVDEVAR-----FQEDHHRQVYVSD 125 Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 + + HR R LK+ C +C +C + + S+ ++ Sbjct: 126 ISEQHIFEDMPIAEHRRHTRAFLKVQDGCNQFCTYC-----IVPYARGRIRSRRIDSVCE 180 Query: 137 YIQ--EKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDP 189 +Q E + +G L +++ + I V +R S ++P Sbjct: 181 EVQLLASDGFKEFVLSGIHIASYGKDMPGGPDLLTLIRAVDAIPGVARIRLGS----IEP 236 Query: 190 QRINPELIQCLKE 202 + + L E Sbjct: 237 LLMTETFVAGLSE 249 >gi|314935815|ref|ZP_07843167.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis subsp. hominis C80] gi|313656380|gb|EFS20120.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis subsp. hominis C80] Length = 340 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 44/177 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G K +L+ + +A + + + ++ TGG+ Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFDEITT-IAKVYAELGVKKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ L K+++ L I+ ++ + + LK+ G+ +Y Sbjct: 77 PLLRRD--LYKLIEKLNRIEGIEDIGLTTNGL-------------LLKKHGQKLYDAGLR 121 Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250 I + + +E AI+ +L Q V+ KGINDD Sbjct: 122 RINVSLDA---IDDEVFQAINNRNIKASTILQQIDYAVSIGFHVKVNVVIQKGINDD 175 >gi|312135001|ref|YP_004002339.1| Radical SAM domain-containing protein [Caldicellulosiruptor owensensis OL] gi|311775052|gb|ADQ04539.1| Radical SAM domain protein [Caldicellulosiruptor owensensis OL] Length = 341 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 45/114 (39%), Gaps = 11/114 (9%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + CP C FC ++ + G ++ L + E L I + E+ + GG+ Sbjct: 8 IFIPQYACPFNCIFCNQKTISGEKEEVSLDRIKRQIEQGLK-INSDEDV-ELAYYGGN-F 64 Query: 156 ILSHKRL-QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 +++L+ + ++ +R +R P I+ E ++ LK Sbjct: 65 TAIDMTFQERLLELANSFERIKSIRISTR-----PDCIDDERLRLLKLYNVRTI 113 >gi|323701819|ref|ZP_08113489.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574] gi|323533123|gb|EGB22992.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574] Length = 330 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 37/212 (17%), Positives = 76/212 (35%), Gaps = 39/212 (18%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C +YC C+R V +++ L++++ + + I E + +IF+GG+PL+ Sbjct: 3 VSWNTTNACNLYCAHCYRDAGVKAEEE--LNTEEGKRLIDQIAE-AGFKIMIFSGGEPLM 59 Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKE-----AGKPVYI 209 + L + LR F + + I PE+ + LK+ G + Sbjct: 60 RPD------IFELVAYAKSKGLRPVFGTNGTL-----ITPEVAKRLKDCGAAGMGISLDS 108 Query: 210 AIHANH----PYE-FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 H E + A+ + AG+ + ++ D+ E L +L V Sbjct: 109 VDPVKHDKFRAQEGCWQAAVEGMRNCRQAGLPFQIHTTVVDWNYDEVEALTDLA---VRE 165 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 +++ F + I Sbjct: 166 GAVAHHVF----------FLVPTGRAVNIEQE 187 >gi|78044693|ref|YP_359280.1| MiaB-like tRNA modifying enzyme [Carboxydothermus hydrogenoformans Z-2901] gi|77996808|gb|ABB15707.1| MiaB-like tRNA modifying enzyme [Carboxydothermus hydrogenoformans Z-2901] Length = 434 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 26/122 (21%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-- 151 R +K+ C YC +C + L S+ E +A +++ +S E++ TG Sbjct: 144 RAFVKIQEGCNSYCAYC-----IIPYARGPLRSRPLEDVVAEVKKLCQSGFSEIVLTGIH 198 Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 D +L ++ L I ++ LR S ++PQ EL+ L + Sbjct: 199 TGAYGQEKQD-----LPKLADLVAELFKIPELKRLRLSS----IEPQDFTVELLDVLANS 249 Query: 204 GK 205 K Sbjct: 250 PK 251 >gi|296273084|ref|YP_003655715.1| MiaB-like tRNA modifying protein [Arcobacter nitrofigilis DSM 7299] gi|296097258|gb|ADG93208.1| MiaB-like tRNA modifying enzyme [Arcobacter nitrofigilis DSM 7299] Length = 421 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 10/125 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C + G S + + E I TG + Sbjct: 139 KSRAFIKIQEGCDFRCSYCIIPYVRGD--ARSYSEDKILEQITTLASN-GFGEFILTGTN 195 Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 K+ L K+LK + IK V+ +R S ++P +I+ E + + E ++ Sbjct: 196 VGSYGKKKHTSLAKLLKKISLIKGVRRIRMGS----IEPIQIDDEFKEIIDEPFMARHLH 251 Query: 211 IHANH 215 I H Sbjct: 252 IALQH 256 >gi|328952311|ref|YP_004369645.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452635|gb|AEB08464.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109] Length = 291 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 37/188 (19%), Positives = 67/188 (35%), Gaps = 32/188 (17%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAY----IQEKSQ 143 Y R+ L + C + C +C R+ ++ ++S+ + A+ + ++ Sbjct: 19 ARHYFGRLHLPVAAGCNIQCGYCDRKYDCPNESRPGVTSQLLTPQEAIDHVEFILKNHPT 78 Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 I V G GD L+ VL +R IL + P + + + L+ Sbjct: 79 ISVVGIAGPGDAFHNPAVTLE-VLARIRAAHPDIILCVSTNGLN-LPDYV--DYLSRLRV 134 Query: 203 AGKPVYIAI-----------HANHPYEF--SEEAI--------AAISRLANAGIILLSQS 241 V I + +H EA+ AIS L G+ + + Sbjct: 135 NFVTVTINTLTPAIGTRIYDYISHHGRIVQGPEAVTILTRLQLQAISLLKRKGLRVKVNT 194 Query: 242 VLLKGIND 249 V++ GIND Sbjct: 195 VIIPGIND 202 >gi|256752725|ref|ZP_05493574.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter ethanolicus CCSD1] gi|256748400|gb|EEU61455.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter ethanolicus CCSD1] Length = 317 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 20/163 (12%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E + +L +++ + I + I +V FTGG+PL+ Sbjct: 14 VSVTDRCNLRCIYCMPEEGIPKKDHNEILRNEEILKIIR-ISAELGIKKVRFTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213 K ++ ++ IK ++ + + + E+ LKEAG K V I++ + Sbjct: 72 -RKGIENIIYETSKIKGIEDIALTTNG------TMLYEMADTLKEAGLKRVNISLDSLKK 124 Query: 214 NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 + + ++ AI + + G+ + +V++KGINDD Sbjct: 125 DRYRMITRLGNIDDVFRAIDKSLSIGLEPVKINTVVIKGINDD 167 >gi|224436696|ref|ZP_03657700.1| hypothetical protein HcinC1_02049 [Helicobacter cinaedi CCUG 18818] gi|313143194|ref|ZP_07805387.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] gi|313128225|gb|EFR45842.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818] Length = 427 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 14/123 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C C +C V + + K + L +S I EV+ TG + Sbjct: 135 KSRAFLKIQEGCDFACSYCII-PSVRGKARSYPKDKILKQILT--LAESGISEVVLTGTN 191 Query: 154 PLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK----EAGKP 206 L +++ + + ++ LR S ++P +I+ E + L+ E Sbjct: 192 VGSYGRDLDSNLAGLIREIYNLGVLRRLRIGS----LEPSQIDSEFKEVLELPIMEKHLH 247 Query: 207 VYI 209 + + Sbjct: 248 IAL 250 >gi|253582853|ref|ZP_04860072.1| molybdenum cofactor biosynthesis protein A [Fusobacterium varium ATCC 27725] gi|251835287|gb|EES63829.1| molybdenum cofactor biosynthesis protein A [Fusobacterium varium ATCC 27725] Length = 325 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 39/164 (23%), Positives = 75/164 (45%), Gaps = 22/164 (13%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C++C R M K +L+ ++ + + I K I ++ TGG+PL+ Sbjct: 14 LSVTDRCNLRCQYCMSERNMNFLPKEELLTVEEIKRIVT-IFSKIGIKKIRLTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 K ++L+ L IK+++ + + + E L + G K + I++ +P Sbjct: 72 -RKNFTEILENLHSIKNIEEISMTTNGL------LLEENFDSLVKNGVKKINISLDTLNP 124 Query: 217 ---YEFS-----EEAIAAISRLANAGI--ILLSQSVLLKGINDD 250 E + + I I + + G+ I L+ VL+KG ND+ Sbjct: 125 VLYSEITRGGSFNQVIKNIFKALDIGMERIKLN-IVLIKGKNDN 167 >gi|291542169|emb|CBL15279.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus bromii L2-63] Length = 446 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 58/170 (34%), Gaps = 16/170 (9%) Query: 67 LNILPEEREDPIGDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFC----FRREMVGS 120 L L ++ + D PL+G I+ P LK+ C C +C R Sbjct: 115 LETLDGQKCESFPDKVCLPLEGGRILSTPPYTAYLKIAEGCDNRCSYCAIPMIRGRFRSR 174 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 V+ + A + + G D L ++L+ L I + +R Sbjct: 175 DIEDVVKEAEGLAERGVKELNVIAQDTTRFGEDKY--GKPMLAELLRRLCRIDGFKWIR- 231 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISR 229 V P RI ELI + K V Y+ I H + + ++R Sbjct: 232 ---VLYCYPDRITDELIDTIAGEDKIVKYMDIPLQH---CDGDVLRRMNR 275 >gi|330686411|gb|EGG98011.1| molybdenum cofactor biosynthesis protein A [Staphylococcus epidermidis VCU121] Length = 341 Score = 46.3 bits (109), Expect = 0.007, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 68/177 (38%), Gaps = 44/177 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAA--LAYIQEKSQIWEVIFTGGD 153 L + C C +C +E+ G L ++ E ++ + + + ++ TGG+ Sbjct: 19 LSVTDRCNFRCDYCMPKEIFGDDF-VFLPKEELLTFEEMVRISKLYAQLGVKKIRITGGE 77 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ + L ++++ L I+ ++ + + LK+ G+ +Y Sbjct: 78 PLL--RRNLYQLIEQLNQIEGIEDIGLTTNGL-------------LLKKHGQNLYNAGLR 122 Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250 I I + ++E AI+ +L Q V+ KGINDD Sbjct: 123 RINISLDA---INDEVFQAINNRNIKASTILEQIDYAISIGFEIKVNVVIQKGINDD 176 >gi|206975055|ref|ZP_03235969.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus H3081.97] gi|229138875|ref|ZP_04267455.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-ST26] gi|206746476|gb|EDZ57869.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus H3081.97] gi|228644606|gb|EEL00858.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-ST26] Length = 337 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G+ + +LS + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGADYAFLQEEFLLSFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L +++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LSQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128 Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H N ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEDHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175 >gi|217959681|ref|YP_002338233.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187] gi|217066262|gb|ACJ80512.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187] Length = 337 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G+ + +LS + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGADYAFLQEEFLLSFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L +++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LSQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128 Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H N ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEGHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175 >gi|85857996|ref|YP_460198.1| molybdenum cofactor biosynthesis protein A [Syntrophus aciditrophicus SB] gi|85721087|gb|ABC76030.1| molybdenum cofactor biosynthesis protein A [Syntrophus aciditrophicus SB] Length = 329 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 26/164 (15%), Positives = 63/164 (38%), Gaps = 22/164 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + CR+C E + +LS +D ++ + I ++ TGG+PL+ Sbjct: 17 ISVTDRCNLRCRYCMPEEGISKLDHREILSLEDIVRSVK-VAAGVGIRKIRLTGGEPLVR 75 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ----------RINPELIQCLKEAGKPV 207 + +++ + + + + + + R+N + + E + + Sbjct: 76 KD--IARLIGFISEVPEIDDIAMTTNGVLFADMAEQLKAAGLDRVNFSMDTMVSEKFRYI 133 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 H + AI + G+ + +V+++G NDD Sbjct: 134 SRRDHL-------ADVRKAIFKALELGLEPVKINTVVIRGFNDD 170 >gi|289523492|ref|ZP_06440346.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503184|gb|EFD24348.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 463 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 21/154 (13%) Query: 53 NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 NDPI R P + ++L ++ D + S + + R +K+ C +C +C Sbjct: 120 NDPIER---PLFLKKDVLSNDKWDAL---ELSRVT-----FHTRSFVKVQDGCNRFCSYC 168 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTL 169 + G + T S K+ + + + EV+ TG G L ++ L Sbjct: 169 IVPFLRG--RPTSRSVKEVAEEVKRLVDH-GCKEVVLTGIHLGLYGYGCDFDLGDLINAL 225 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I+ ++ LRF S ++P ++ LI L E+ Sbjct: 226 SRIEGLRRLRFGS----IEPHALSDRLIDVLAES 255 >gi|328911014|gb|AEB62610.1| oxygen-independent coproporphyrinogen III oxidase, putative [Bacillus amyloliquefaciens LL3] Length = 522 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 45/233 (19%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131 I D + + + + + + CP C +C + + S Sbjct: 176 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 235 Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189 + ++++ ++ + F GG P ++ + + + + + R +V+ +R + V P Sbjct: 236 QKIGEWLKQHDIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPNVENIREIT-VEAGRP 294 Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 I E + L + + I P + E + AI R +V Sbjct: 295 DTITEEKLAVLNKYKIDRISIN-----PQSYENETLKAIGR---------HHTV------ 334 Query: 249 DDPEILAN--LMRTFVELRIKPYYLHHPDLA-----AGTSHFRLTIEEGQKIV 294 E + L R I + DL GT+ FR +++E +K++ Sbjct: 335 --EETIEKYHLSRKHGMNNI------NMDLIIGLPGEGTAEFRHSLDETEKLM 379 >gi|218903282|ref|YP_002451116.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820] gi|218538331|gb|ACK90729.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820] Length = 337 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 36/173 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALA-YIQEKSQIWEVIFTGG 152 + ++ C C +C E+ G + +L+ + E +I+ + ++ TGG Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFIRM--GVNKIRLTGG 75 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211 +PL+ L ++ L + ++ + + + Q + LKEAG K V I++ Sbjct: 76 EPLLRKD--LPHLIARLAKLDGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISL 127 Query: 212 --------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + ++ + I AG+ + V+ KG+ND Sbjct: 128 DAIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175 >gi|150390422|ref|YP_001320471.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus metalliredigens QYMF] gi|238065283|sp|A6TRJ4|RIMO_ALKMQ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|149950284|gb|ABR48812.1| MiaB-like tRNA modifying enzyme YliG [Alkaliphilus metalliredigens QYMF] Length = 446 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 12/114 (10%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--- 153 +K+ C YC +C ++ G + + ++ + + E+I D Sbjct: 147 AYIKISDGCDNYCTYCIIPKLRGKYRSRKM--ENIIQEAQTLANN-GVKEIILIAQDTTR 203 Query: 154 -PLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + L + RL +L L ++ +Q +R P+ I ELI +K K Sbjct: 204 YGIDLYDEYRLSALLDKLSEVEGIQWIRI----LYCYPEMITDELIATIKNNDK 253 >gi|154503579|ref|ZP_02040639.1| hypothetical protein RUMGNA_01403 [Ruminococcus gnavus ATCC 29149] gi|260589912|ref|ZP_05855825.1| putative elongator protein 3/MiaB/NifB [Blautia hansenii DSM 20583] gi|153795679|gb|EDN78099.1| hypothetical protein RUMGNA_01403 [Ruminococcus gnavus ATCC 29149] gi|260539719|gb|EEX20288.1| putative elongator protein 3/MiaB/NifB [Blautia hansenii DSM 20583] Length = 426 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 65/173 (37%), Gaps = 19/173 (10%) Query: 72 EEREDPIGDNNHSPLKGIV--HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 +E+ P+ +K I H + + L + C + C FC + + Sbjct: 51 QEKLFPVWKQQTEFIKEIENNHEKINTVYLMVTRKCNMNCDFCAISANDKLRPEKEFKLE 110 Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPI 186 D + + +K++ ++I TGG+PLI ++ ++ K LR + S Sbjct: 111 DIQNKVIPFFQKNKPHKMILTGGEPLI--KDQIVEIAKALRNGLTCP----ITLQSNGLA 164 Query: 187 VDPQRINPELIQCLKEAGKPVYIAI-H-ANHPYEFSEEAIAAISRLANAGIIL 237 I EL + LK + + H P E ++ I I AGI + Sbjct: 165 -----ITRELTEQLKGYIDEIDFSTMHMFGTP-EKEQQLINHIEMCQQAGIKV 211 >gi|330835443|ref|YP_004410171.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567582|gb|AEB95687.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4] Length = 352 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 49/287 (17%), Positives = 103/287 (35%), Gaps = 55/287 (19%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++L+ C + CR C + G L++++ ++ + + S + + +GGD Sbjct: 4 PYVVVLESTKACDLACRHCRANALPNRLPGE-LTTEEVKSLVEDLSS-SGVKLFVVSGGD 61 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD--P--QRINPELIQCLKEAGKPVYI 209 L + + + ILR+ SR P RIN ++ + +KE G + + Sbjct: 62 AL-----KRDDIFE---------ILRYSSRRLNTALSPSGSRINLDVAKKIKETGVSI-V 106 Query: 210 AIHANHPYEFSEE----------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 +I + P E +E A AI L G+ + + + K + E L +L+R Sbjct: 107 SISVDGPEEVHDEFRGVKGAFKMAKGAIESLKEVGVPVQINTTISKY---NVEKL-DLLR 162 Query: 260 TFVELRIKPYY--LHHPDLA-AGTSHFRLTIEEGQKIVASL-KEKISGLCQ-----PFYI 310 VE P + + T ++ ++ + ++ + + + GL P+ + Sbjct: 163 EVVE-GFNPAFWDIFMLIPTGRATKEMMISPDQAEIVMKRVTEWRSDGLNVRMTCAPYLV 221 Query: 311 LDLPGGYGKVKIDTHNIKKV----------GNGSYCITDHHNIVHDY 347 + + I Y + V+ Sbjct: 222 RVMNELNVTNPLPPDRIYGRRSVNGARGCMAGNGYAFISYDGTVYPC 268 >gi|57641163|ref|YP_183641.1| molybdenum cofactor biosynthesis protein A [Thermococcus kodakarensis KOD1] gi|57159487|dbj|BAD85417.1| probable molybdenum cofactor biosynthesis protein A [Thermococcus kodakarensis KOD1] Length = 419 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 33/184 (17%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-- 145 G++ R + I ++ + C + C FC E S+ + D + + + E ++I Sbjct: 108 GLIDRGTNLIQVRGVSGCNLSCVFCSVDEGPYSRTRKLDYVVDIDYLMKWFDEVARIKGK 167 Query: 146 --EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 E G G+PLI + ++++ LR +V ++ S + +N +L++ L E Sbjct: 168 GLEAHLDGQGEPLIYPFRV--ELVQALREHPNVSVISMQSNGTL-----LNDKLVEELAE 220 Query: 203 AGK-PVYIAIHANHPYEFSEEAIAAI---------------SRLANAGIILLSQSVLLKG 246 AG V ++IH + + L NAGI +L V++ G Sbjct: 221 AGLDRVNLSIH-----SLDPDKAKMLMGRKDYDLQHVLDMAEALVNAGIDVLIAPVIIFG 275 Query: 247 INDD 250 +ND+ Sbjct: 276 VNDN 279 >gi|294782047|ref|ZP_06747373.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. 1_1_41FAA] gi|294480688|gb|EFG28463.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. 1_1_41FAA] Length = 342 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 34/170 (20%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148 ++ + + CP C FC ++++ G + +S D + + Y++ I EV Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKEVA 59 Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G Sbjct: 60 FFGG-TFTGISMELQKQYLEVVKKYIDNADVEGVRISTR-----PECIDDEILTQLKKYG 113 Query: 205 -KPVYIAI-------------HANHPYEFSEEAIAAISRLANAGIILLSQ 240 K + + I H N YE + + G L Q Sbjct: 114 VKTIELGIQSLDDEVLKATGRHYN--YEI---VKKSCDLIKKYGFTLGVQ 158 >gi|291542691|emb|CBL15801.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Ruminococcus bromii L2-63] Length = 457 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 60/129 (46%), Gaps = 13/129 (10%) Query: 92 RYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-- 145 + + ++ L + H C + C +CF + + ++S + + A+ ++ E S Sbjct: 92 KKRNTVIKALCLHIAHTCNLNCEYCFASQGKYHGERALMSFEVGKRAIDFLIENSGSRVN 151 Query: 146 -EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKE 202 EV F GG+PL ++ +++++ R I +H + RF + ++ ++I+ + Sbjct: 152 LEVDFFGGEPL-MNFDVVKQIVAYARSIEKEHNKNFRF---TLTTNGMLVDDDVIEFANK 207 Query: 203 AGKPVYIAI 211 V +++ Sbjct: 208 ECHNVVLSL 216 >gi|126700065|ref|YP_001088962.1| putative radical SAM superfamily protein [Clostridium difficile 630] gi|254976042|ref|ZP_05272514.1| putative radical SAM superfamily protein [Clostridium difficile QCD-66c26] gi|255093430|ref|ZP_05322908.1| putative radical SAM superfamily protein [Clostridium difficile CIP 107932] gi|255101608|ref|ZP_05330585.1| putative radical SAM superfamily protein [Clostridium difficile QCD-63q42] gi|255307477|ref|ZP_05351648.1| putative radical SAM superfamily protein [Clostridium difficile ATCC 43255] gi|255315175|ref|ZP_05356758.1| putative radical SAM superfamily protein [Clostridium difficile QCD-76w55] gi|255517844|ref|ZP_05385520.1| putative radical SAM superfamily protein [Clostridium difficile QCD-97b34] gi|255650960|ref|ZP_05397862.1| putative radical SAM superfamily protein [Clostridium difficile QCD-37x79] gi|260684029|ref|YP_003215314.1| putative radical SAM superfamily protein [Clostridium difficile CD196] gi|260687689|ref|YP_003218823.1| putative radical SAM superfamily protein [Clostridium difficile R20291] gi|306520839|ref|ZP_07407186.1| putative radical SAM superfamily protein [Clostridium difficile QCD-32g58] gi|115251502|emb|CAJ69335.1| putative MiaB-like tRNA modifying enzyme [Clostridium difficile] gi|260210192|emb|CBA64398.1| putative radical SAM superfamily protein [Clostridium difficile CD196] gi|260213706|emb|CBE05587.1| putative radical SAM superfamily protein [Clostridium difficile R20291] Length = 432 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 17/120 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C +C +C + + S+D ++ + ++ + EV+ TG Sbjct: 141 KTRAFMKIQDGCDRFCTYC-----IIPYARGRVRSRDIDSIVDEVKKLANNGYKEVVLTG 195 Query: 152 GDPLI----LSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L + +L V+K + I+ ++ +R S V+P E + + + K Sbjct: 196 IHVASYGKDLKDRDIKLLDVIKQINQIEKIERIRLSS----VEPILFTDEFVNEVLKMDK 251 >gi|4104517|gb|AAD02057.1| unknown [Clostridium acetobutylicum DSM 1731] Length = 386 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 21/128 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R LK+ C +C +C G + SK+ E + I+ ++ E+I +G Sbjct: 141 KTRAFLKIQDGCNRFCSYCLIPYARGG-----VCSKNPEKVIGEIKRLAEHGFKEIILSG 195 Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 GD L L +++ I ++ +R S ++P+ + + I +K K Sbjct: 196 IHIASYGDDLKGDW-NLISIIEKAEQIDGIERIRIGS----IEPRFFDEDTISKIKNMKK 250 Query: 206 PVYIAIHA 213 + H Sbjct: 251 ---MCPHF 255 >gi|15894568|ref|NP_347917.1| Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824] gi|15024215|gb|AAK79257.1|AE007641_3 Fe-S oxidoreductases [Clostridium acetobutylicum ATCC 824] gi|325508700|gb|ADZ20336.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018] Length = 436 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 21/128 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R LK+ C +C +C G + SK+ E + I+ ++ E+I +G Sbjct: 141 KTRAFLKIQDGCNRFCSYCLIPYARGG-----VCSKNPEKVIGEIKRLAEHGFKEIILSG 195 Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 GD L L +++ I ++ +R S ++P+ + + I +K K Sbjct: 196 IHIASYGDDLKGDW-NLISIIEKAEQIDGIERIRIGS----IEPRFFDEDTISKIKNMKK 250 Query: 206 PVYIAIHA 213 + H Sbjct: 251 ---MCPHF 255 >gi|11499786|ref|NP_071029.1| arylsulfatase regulatory protein, putative [Archaeoglobus fulgidus DSM 4304] gi|3334443|sp|O28079|Y2204_ARCFU RecName: Full=Uncharacterized protein AF_2204 gi|2648320|gb|AAB89048.1| arylsulfatase regulatory protein, putative [Archaeoglobus fulgidus DSM 4304] Length = 412 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 22/106 (20%), Positives = 43/106 (40%), Gaps = 15/106 (14%) Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYP-----DRILLKLLHVCPVYCRFCFRREMV 118 +EE+ ER+D + + + RY + C C +C+ + Sbjct: 26 REEVERFYRERKDALLEE--------MQRYRFEVDIRTAYINPTESCNRNCPYCYIPAEI 77 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 ++GT +S + E L + E + VIF G +PL++ + + Sbjct: 78 -RERGTKMSYEKLEEILTVLAEN-GVERVIFHGAEPLMVKDEIFRA 121 >gi|294053874|ref|YP_003547532.1| molybdenum cofactor biosynthesis protein A [Coraliomargarita akajimensis DSM 45221] gi|293613207|gb|ADE53362.1| molybdenum cofactor biosynthesis protein A [Coraliomargarita akajimensis DSM 45221] Length = 335 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 36/190 (18%), Positives = 71/190 (37%), Gaps = 40/190 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + L C + C +C +E+ G K L + +A +A + ++ TGG+ Sbjct: 15 ISLTDRCNLRCTYCMPKEVFGPDYVFLKKQEWLRFSELDAVVAAFVR-LGVRKLRLTGGE 73 Query: 154 PLILSHKRLQKV--LKTLRYIKHVQI----LRF----------HSRVPIVDPQRINPELI 197 PL L L+ + L+ I+ V + +R + V ++ +L Sbjct: 74 PL-LRPGLLKYIEGLRRFEPIEDVALTTNGMRLAEKVGDLKAAGLKRVTVSLDALDADLC 132 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAA-ISRLANAGIILLSQSVLLKGINDDPEILAN 256 + G + + A I AG+ + V+ +G+ND E+L Sbjct: 133 GRMNGRG--------------IGPKVVLAGIDAALKAGLGVKVNMVVERGVND-AEVL-P 176 Query: 257 LMRTFVELRI 266 ++R F + + Sbjct: 177 MVRYFKSIGV 186 >gi|269215615|ref|ZP_06159469.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Slackia exigua ATCC 700122] gi|269131102|gb|EEZ62177.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Slackia exigua ATCC 700122] Length = 423 Score = 46.3 bits (109), Expect = 0.008, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 55/143 (38%), Gaps = 12/143 (8%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 +R + D + + G +P R+ +K+ C C FC V + + Sbjct: 135 ADRSFALSDAAAARVGGS---FPTRVPVKIQDGCDNACTFCIV--HVARGRSRSRDAAAV 189 Query: 132 EAALAYIQEKSQIWEVIFTGGDP--LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 E ++ + + + E++ +G + L + + L LR S ++P Sbjct: 190 EREVSALGA-AGVREIVLSGINLGRYRCGDAGLATLAERLLSCAPETRLRISS----IEP 244 Query: 190 QRINPELIQCLKEAGKPVYIAIH 212 Q ++ LI+ + +G V +H Sbjct: 245 QSVDDALIEVMATSGGRVCRHLH 267 >gi|295103959|emb|CBL01503.1| SSU ribosomal protein S12P methylthiotransferase [Faecalibacterium prausnitzii SL3/3] Length = 441 Score = 45.9 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 65/211 (30%), Gaps = 49/211 (23%) Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL--------LKLLHVCPVYCRFC----F 113 E E+ + G PL G R++ LK+ C C +C Sbjct: 113 ERLFHGEDHLESYGAKKDFPLGG------KRVIGTPAHYAYLKIAEGCNNRCHYCAIPGI 166 Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-----SHKRLQKVLKT 168 R + ++ A + E+I DP + ++L Sbjct: 167 RGPLHSRDMADCVAEARWLAG-------EGVKELIVVAQDPTAYGEDWGKPGSICELLDK 219 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP----------Y 217 L + ++ +R P+RI E I +K K V Y+ + H Sbjct: 220 LNKVPGLEWIRI----MYAYPERITDEFIAAMKRNEKVVPYLDLPIQHCNDTILKNMNRR 275 Query: 218 EFSEEAIAAISRLANA--GIILLSQSVLLKG 246 E + I +L GI L + L+ G Sbjct: 276 STRAELLEVIGKLRREIPGITLR--TTLIAG 304 >gi|291543502|emb|CBL16611.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus sp. 18P13] Length = 447 Score = 45.9 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 61/152 (40%), Gaps = 20/152 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150 LK+ C C +C + G + + +D ++ E + Sbjct: 147 AYLKIAEGCNNCCTYCAIPMIRGGFR--SVPMEDVLEEARWLTEHGVTELTVIAQDTTRY 204 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209 G D + RL ++L+ L I+ ++ +R V P+RI +L++ + K V Y+ Sbjct: 205 GED--LYGESRLPELLEQLCRIQGIRWIR----VLYCYPERITDKLLEVMAREEKLVKYL 258 Query: 210 AIHANHPYEFSEEAIAAISRLANAG--IILLS 239 I H + + + ++R +AG LL+ Sbjct: 259 DIPIQH---CNGDILRRMNRQGDAGTLAALLN 287 >gi|160942860|ref|ZP_02090099.1| hypothetical protein FAEPRAM212_00336 [Faecalibacterium prausnitzii M21/2] gi|158445761|gb|EDP22764.1| hypothetical protein FAEPRAM212_00336 [Faecalibacterium prausnitzii M21/2] Length = 441 Score = 45.9 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 65/211 (30%), Gaps = 49/211 (23%) Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL--------LKLLHVCPVYCRFC----F 113 E E+ + G PL G R++ LK+ C C +C Sbjct: 113 ERLFHGEDHLESYGAKKDFPLGG------KRVIGTPAHYAYLKIAEGCNNRCHYCAIPGI 166 Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-----SHKRLQKVLKT 168 R + ++ A + E+I DP + ++L Sbjct: 167 RGPLHSRDMADCVAEARWLAG-------EGVKELIVVAQDPTAYGEDWGKPGSICELLDK 219 Query: 169 LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP----------Y 217 L + ++ +R P+RI E I +K K V Y+ + H Sbjct: 220 LNKVPGLEWIRI----MYAYPERITDEFIAAMKRNEKVVPYLDLPIQHCNDTILKNMNRR 275 Query: 218 EFSEEAIAAISRLANA--GIILLSQSVLLKG 246 E + I +L GI L + L+ G Sbjct: 276 STRAELLEVIGKLRREIPGITLR--TTLIAG 304 >gi|222823704|ref|YP_002575278.1| MiaB-like tRNA modifying enzyme [Campylobacter lari RM2100] gi|222538926|gb|ACM64027.1| MiaB-like tRNA modifying enzyme [Campylobacter lari RM2100] Length = 418 Score = 45.9 bits (108), Expect = 0.008, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 10/128 (7%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + +K+ C C +C + G K + S + + + + EV+ TG + Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRG--KSRSIPSDEIIKQIKLLAQN-GYSEVVLTGTN 188 Query: 154 --PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 L K L K+L+ + I ++ +R S ++P +I+ + L E ++ Sbjct: 189 IGSYGLKDKTTLGKLLQEIGKINGIKRVRLGS----LEPAQIDESFKEILDEPWLERHLH 244 Query: 211 IHANHPYE 218 I H +E Sbjct: 245 IALQHTHE 252 >gi|27262458|gb|AAN87510.1| molybdenum cofactor biosynthesis protein A [Heliobacillus mobilis] Length = 327 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 36/175 (20%), Positives = 65/175 (37%), Gaps = 21/175 (12%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C + + VL ++ E + I I V TGG+PL+ Sbjct: 14 VSVTDRCNLRCVYCMPEQGIPLVDHEEVLRFEEFEQLIR-IAAAEGIRRVRVTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216 K + + ++ I ++ + + + PQ + LK AG V I++ P Sbjct: 72 -RKGIVDFVARVKEIPGIEDVALTTNGIL-LPQ-----FARDLKAAGLNRVNISLDTLRP 124 Query: 217 YEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDD-PEILANLMRTF 261 F A I + G+ + V++ G+NDD A L Sbjct: 125 ERFLSITRTGQVKDVWAGIEAALDEGLHPVKLNVVVMGGVNDDEVVDFARLTERL 179 >gi|228927225|ref|ZP_04090288.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229121710|ref|ZP_04250933.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus 95/8201] gi|228661754|gb|EEL17371.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus 95/8201] gi|228832551|gb|EEM78125.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 337 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 69/168 (41%), Gaps = 26/168 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALA-YIQEKSQIWEVIFTGG 152 + ++ C C +C E+ G + +L+ + E +I+ + ++ TGG Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFIRM--GVNKIRLTGG 75 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211 +PL+ L ++ L + ++ + + + Q + LKEAG K V I++ Sbjct: 76 EPLLRKD--LPHLIARLAKLDGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISL 127 Query: 212 -----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H N ++ + I AG+ + V+ KG+ND+ Sbjct: 128 DAIEDHVFKKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDN 175 >gi|163781559|ref|ZP_02176559.1| molybdenum cofactor biosynthesis protein A [Hydrogenivirga sp. 128-5-R1-1] gi|159882779|gb|EDP76283.1| molybdenum cofactor biosynthesis protein A [Hydrogenivirga sp. 128-5-R1-1] Length = 332 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 68/166 (40%), Gaps = 20/166 (12%) Query: 97 ILLKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 + + + C C FC +E+ Q+ +LS ++ + + + + TGG+P Sbjct: 13 VRISVTDRCNFRCFFCMPPDKEIEFLQRSELLSYEEIARLVGVLVS-LGVRKARITGGEP 71 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+ L+ +++ L I+ ++ + + ++ +L + K V +++ Sbjct: 72 LM--RAHLENLVEKLASIEGLRDI-----ALTTNGYTLDRKLDSLVSAGLKRVTVSLITL 124 Query: 215 HPYEFSE---------EAIAAISRLANAGI-ILLSQSVLLKGINDD 250 + +F+ I I G+ + V+++G+NDD Sbjct: 125 NQDKFTSMVGRDVSLNRVIEGIRSARQMGLNPVKVNMVVVRGVNDD 170 >gi|314933749|ref|ZP_07841114.1| Fe-S oxidoreductase [Staphylococcus caprae C87] gi|313653899|gb|EFS17656.1| Fe-S oxidoreductase [Staphylococcus caprae C87] Length = 448 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQASQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L I+ ++ +R S ++ ++ E+I+ + + K Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDEIEGLERIRISS----IEASQLTDEVIEVIGNSNK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHV 257 >gi|255656429|ref|ZP_05401838.1| putative radical SAM superfamily protein [Clostridium difficile QCD-23m63] gi|296450124|ref|ZP_06891885.1| 2-methylthioadenine synthetase [Clostridium difficile NAP08] gi|296878505|ref|ZP_06902510.1| 2-methylthioadenine synthetase [Clostridium difficile NAP07] gi|296260887|gb|EFH07721.1| 2-methylthioadenine synthetase [Clostridium difficile NAP08] gi|296430312|gb|EFH16154.1| 2-methylthioadenine synthetase [Clostridium difficile NAP07] Length = 432 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 17/120 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C +C +C + + S+D ++ + ++ + EV+ TG Sbjct: 141 KTRAFMKIQDGCDRFCTYC-----IIPYARGRVRSRDIDSIVDEVKKLANNGYKEVVLTG 195 Query: 152 GDPLI----LSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L + +L V+K + I+ ++ +R S V+P E + + + K Sbjct: 196 IHVASYGKDLKDRDIKLLDVIKQINKIEKIERIRLSS----VEPILFTDEFVNEVLKMDK 251 >gi|138894319|ref|YP_001124772.1| coenzyme PQQ synthesis protein PqqE [Geobacillus thermodenitrificans NG80-2] gi|134265832|gb|ABO66027.1| Coenzyme PQQ synthesis protein PqqE [Geobacillus thermodenitrificans NG80-2] Length = 372 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ +L C + C C R E + L+ ++ + + I + + ++FTGGD Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYDMDEPM-LVFTGGD 65 Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208 PL+ L K I + LR S P P + E I+ KE G + Sbjct: 66 PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLARWAFSL 116 Query: 209 ------IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMRT 260 I H F I AI L I + +V+ + N + + L+ Sbjct: 117 DGPNAEIHDHFRGTSGSFD-LTIRAIQYLHELDIPVQINTVISRY-NVHVLDEMVELVEK 174 Query: 261 F 261 Sbjct: 175 L 175 >gi|145220314|ref|YP_001131023.1| MiaB-like tRNA modifying enzyme [Prosthecochloris vibrioformis DSM 265] gi|145206478|gb|ABP37521.1| MiaB-like tRNA modifying enzyme [Chlorobium phaeovibrioides DSM 265] Length = 451 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 15/123 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LKL C C +C + + +V + A + S E++ TG Sbjct: 153 RTRAFLKLQDGCDYGCAYCTI-PLARGRSRSVPPEVVLQQAQ--MLADSGYREIVLTGVN 209 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + L+ +L+ L I V +R S ++P + EL+ + + I Sbjct: 210 TGDYRSGTTGFLE-LLRMLEDID-VPRIRISS----LEPDILTDELVALVAASRT---IV 260 Query: 211 IHA 213 H Sbjct: 261 PHF 263 >gi|223044380|ref|ZP_03614414.1| conserved hypothetical protein [Staphylococcus capitis SK14] gi|222442249|gb|EEE48360.1| conserved hypothetical protein [Staphylococcus capitis SK14] Length = 448 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQASQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L I+ ++ +R S ++ ++ E+I+ + + K Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDEIEGLERIRISS----IEASQLTDEVIEVIGNSNK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHV 257 >gi|260460192|ref|ZP_05808444.1| Radical SAM domain protein [Mesorhizobium opportunistum WSM2075] gi|259033837|gb|EEW35096.1| Radical SAM domain protein [Mesorhizobium opportunistum WSM2075] Length = 382 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 15/126 (11%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--------E 146 D +LLK+ C + C +C+ M G + + ++A + + ++ Sbjct: 12 DTVLLKVASRCNLDCSYCYIYHM-GDEAWRSQPKQMSDAVIQMVAQRLSDQLALQAVPFS 70 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 V+ GG+PL+L RL+ TLR + H + + I+ +I L Sbjct: 71 VVLHGGEPLLLGATRLEHFCATLRGVLPHPCGIHIQTNG-----ALISDRIIDVLVRYDV 125 Query: 206 PVYIAI 211 V ++I Sbjct: 126 GVSVSI 131 >gi|154482583|ref|ZP_02025031.1| hypothetical protein EUBVEN_00250 [Eubacterium ventriosum ATCC 27560] gi|149736608|gb|EDM52494.1| hypothetical protein EUBVEN_00250 [Eubacterium ventriosum ATCC 27560] Length = 437 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 50/124 (40%), Gaps = 12/124 (9%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C G + + + +A L + S E++ TG + Sbjct: 147 HTRAHLKIQDGCNNFCSYCIIPYARGRIRSRTM--ESIKAELERLSA-SGFKEIVLTGIN 203 Query: 154 PLILSHKRLQKVLKTLRYIKHV---QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 L +K++ + +V + +R S +DP+ + + ++ L + K + Sbjct: 204 -LSCYDDNGKKLIDVIEMADNVNGIERIRLGS----LDPEVVTEDFVERLGKV-KKICPH 257 Query: 211 IHAN 214 H + Sbjct: 258 FHFS 261 >gi|251796225|ref|YP_003010956.1| RNA modification enzyme, MiaB family [Paenibacillus sp. JDR-2] gi|247543851|gb|ACT00870.1| RNA modification enzyme, MiaB family [Paenibacillus sp. JDR-2] Length = 448 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 62/166 (37%), Gaps = 34/166 (20%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + S E A + EV+ TG Sbjct: 142 RTRAFLKIQEGCNNFCTFCIIPWSRGLSRSRDPKSV-LEQAKQLVAS--GYKEVVLTGIH 198 Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 GD + + RL +L L I+ ++ +R S ++ +I+ +I L + K + Sbjct: 199 TGGYGD--DMENYRLVDLLWDLDKIEGLERIRISS----IEASQIDDAMIDVLNRSTK-M 251 Query: 208 YIAIHANHPYEF--------------SEEAIAAISRLANA--GIIL 237 +H P + ++E A + R+ A G+ + Sbjct: 252 CRHLHI--PLQAGDTSVLKRMRRKYTTDEFAAKLKRIREAMPGVAI 295 >gi|297531022|ref|YP_003672297.1| radical SAM protein [Geobacillus sp. C56-T3] gi|297254274|gb|ADI27720.1| Radical SAM domain protein [Geobacillus sp. C56-T3] Length = 372 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 67/180 (37%), Gaps = 24/180 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ +L C + C C R E + L+ ++ + + I E Q ++FTGGD Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYEMDQPM-LVFTGGD 65 Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208 PL+ L K I + LR S P P + E I+ KE G + Sbjct: 66 PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLSRWAFSL 116 Query: 209 ------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMRTF 261 I H + I AI L I + +V+ + N + +A L+ Sbjct: 117 DGPNAEIHDHFRGVSGSFDLTIRAIQYLHELDIPVQINTVISRY-NVHVLDEMAALVEKL 175 >gi|296132657|ref|YP_003639904.1| Radical SAM domain protein [Thermincola sp. JR] gi|296031235|gb|ADG82003.1| Radical SAM domain protein [Thermincola potens JR] Length = 331 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 39/217 (17%), Positives = 81/217 (37%), Gaps = 49/217 (22%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C +YC C+R G++ L++++ +A L I + + +IF+GG+P + Sbjct: 3 VSWNTTNQCNMYCDHCYRDA--GAKATEELNTEEGKALLDEIAK-AGFKIMIFSGGEPFM 59 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIV--DPQRINPELIQCLKEAGKP-VYIAIHA 213 + ++ H + L H P+ + I P++ + LKE G V I++ Sbjct: 60 RED--IFDLVA------HAKKLGLH---PVFGTNGTLITPDVAKKLKELGVMGVGISL-- 106 Query: 214 NHPYEFSEEAIAAISRL--------------ANAGIILLSQSVLLKGINDDPEILANLMR 259 +E + +L AG+ + L+ D+ E + + Sbjct: 107 ---DSLDKEKHDNLRKLKGAWDGAVQGMINCREAGVPFQVHTTLMDWNYDEAEAITDFA- 162 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 VE+ K ++ F + + I Sbjct: 163 --VEIGAKAHHFF----------FLVPTGRAKNIEEE 187 >gi|56963428|ref|YP_175159.1| 2-methylthioadenine synthetase [Bacillus clausii KSM-K16] gi|56909671|dbj|BAD64198.1| 2-methylthioadenine synthetase [Bacillus clausii KSM-K16] Length = 445 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 22/129 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R LK+ C +C FC G ++ S+D + + Q+ + E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEVVRQAQQLVHAGYKEIVLTG 196 Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 D L L ++L+ L ++ ++ LR S ++ ++ E+I + ++ Sbjct: 197 IHTGGYGED---LKDYSLARLLEDLEKVEGLKRLRISS----IEASQLTDEVIAVIGKSS 249 Query: 205 KPVYIAIHA 213 K V +H Sbjct: 250 K-VVRHMHI 257 >gi|196248072|ref|ZP_03146774.1| Radical SAM domain protein [Geobacillus sp. G11MC16] gi|196212856|gb|EDY07613.1| Radical SAM domain protein [Geobacillus sp. G11MC16] Length = 372 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ +L C + C C R E + L+ ++ + + I + + ++FTGGD Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYDMDEPM-LVFTGGD 65 Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208 PL+ L K I + LR S P P + E I+ KE G + Sbjct: 66 PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLARWAFSL 116 Query: 209 ------IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMRT 260 I H F I AI L I + +V+ + N + + L+ Sbjct: 117 DGPNAEIHDHFRGTSGSFD-LTIRAIQYLHELDIPVQINTVISRY-NVHVLDEMVELVEK 174 Query: 261 F 261 Sbjct: 175 L 175 >gi|222055074|ref|YP_002537436.1| MiaB-like tRNA modifying enzyme [Geobacter sp. FRC-32] gi|221564363|gb|ACM20335.1| MiaB-like tRNA modifying enzyme [Geobacter sp. FRC-32] Length = 438 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 57/146 (39%), Gaps = 24/146 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150 R L++ + C +C +C + S E ALA I+ + EV+ T Sbjct: 145 HTRAFLQVQNGCDAFCSYC-----IVPYARGRSRSVSLEEALAGIRTFAERGFKEVVLTG 199 Query: 151 ---GGDPLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 G L L+ L +L + V+ +R S V+P ++ LI L ++ Sbjct: 200 IHLGAYGLDLNPPLSLLDLLNAAEKERLVERIRIGS----VEPTEVSDALISFLAKSATV 255 Query: 206 --PVYIAIHANHPYEFSEEAIAAISR 229 ++I + + H + A++R Sbjct: 256 CPHLHIPLQSGHDR-----VLKAMNR 276 >gi|261368034|ref|ZP_05980917.1| RNA modification enzyme, MiaB family [Subdoligranulum variabile DSM 15176] gi|282570022|gb|EFB75557.1| RNA modification enzyme, MiaB family [Subdoligranulum variabile DSM 15176] Length = 446 Score = 45.9 bits (108), Expect = 0.009, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 57/172 (33%), Gaps = 35/172 (20%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 LK+ C C +C R + ++ A + E+I Sbjct: 147 AYLKIAEGCNNRCHYCAIPLIRGPLRSRPIEDCVAEARWLAG-------EGVRELILVAQ 199 Query: 153 DPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 DP + ++L L+ I ++ +R P+RI+ I + K V Sbjct: 200 DPTAYGEDWGKPGAVCELLDRLQQIDGIRWIRI----LYAYPERISDAFIAAMVRNTKVV 255 Query: 208 -YIAIHANHPYEF----------SEEAIAAISRLANA--GIILLSQSVLLKG 246 Y+ + H + + AI+RL A GI L + L+ G Sbjct: 256 PYLDLPIQHCDDAVLKAMNRRGGRADIEDAIARLRAAIPGITLR--TTLIAG 305 >gi|317503044|ref|ZP_07961124.1| Fe-S oxidoreductase [Prevotella salivae DSM 15606] gi|315665844|gb|EFV05431.1| Fe-S oxidoreductase [Prevotella salivae DSM 15606] Length = 446 Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C +C G + +SS K E A A E++ TG Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTISSLIKQAEEAAA-----EGGKEIVLTG 207 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GD +H+R ++K L ++ ++ R S ++P I+ ELI E+ Sbjct: 208 VNIGDFGETTHERFIDLVKALDKVEGIKRFRISS----LEPDLIDDELIAFCAESR---A 260 Query: 209 IAIHA 213 H Sbjct: 261 FMPHF 265 >gi|225011453|ref|ZP_03701891.1| molybdenum cofactor biosynthesis protein A [Flavobacteria bacterium MS024-2A] gi|225003956|gb|EEG41928.1| molybdenum cofactor biosynthesis protein A [Flavobacteria bacterium MS024-2A] Length = 335 Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 40/169 (23%), Positives = 71/169 (42%), Gaps = 22/169 (13%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 H Y + + L C + C +C +E V L + + +LA + K+ + ++ T Sbjct: 16 HNY---LRISLTERCNLRCSYCMPQEGVTLTPKPQLMNAEEIFSLAALFVKNGVNKIRLT 72 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYI 209 GG+PL+ +L L + VQ+ + I I LK++G + I Sbjct: 73 GGEPLVRKD--FPDILSRLSQLP-VQL------SLTSNAFSI-DRHIPLLKDSGVHSINI 122 Query: 210 AI---HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 ++ A E + ++ I +L G + +VL+KGINDD Sbjct: 123 SLDTLQAKRFQEITFRNYFDQVHQNILKLIREGFNVKINAVLMKGINDD 171 >gi|153854410|ref|ZP_01995688.1| hypothetical protein DORLON_01683 [Dorea longicatena DSM 13814] gi|149752936|gb|EDM62867.1| hypothetical protein DORLON_01683 [Dorea longicatena DSM 13814] Length = 442 Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 54/153 (35%), Gaps = 29/153 (18%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLS 127 +E D + + L R +K+ C +C +C R + + +VL Sbjct: 134 QEILDINHEKVYEDLHLSTAAEHTRAYIKVQDGCNQFCSYCIIPFARGRVRSRSRDSVLD 193 Query: 128 SKDTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 T +A Y EV+ T G D L ++ + ++ ++ +R Sbjct: 194 EVKTLSANGY-------KEVVLTGIHLSSYGIDC----DDNLLSLILAIHEVEGIERIRL 242 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 S ++P+ I E Q + + K + H Sbjct: 243 GS----LEPRIITEEFAQTIAKLPK---MCPHF 268 >gi|294778157|ref|ZP_06743588.1| radical SAM domain protein [Bacteroides vulgatus PC510] gi|294448016|gb|EFG16585.1| radical SAM domain protein [Bacteroides vulgatus PC510] Length = 433 Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 52/119 (43%), Gaps = 13/119 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P+R+ + C + C+ CF + + SS DT+ L+ + + I + TGG+ Sbjct: 107 PERVDFLITKHCNLACKHCFEGSSPSFEVKRI-SSSDTDRILSQFEA-ANIQTLKITGGE 164 Query: 154 PLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 P + L + I+ H + + + +++ QRI+ +K+ + I++ Sbjct: 165 PFSHPD--IDNFL--FKAIQCHFETI-ILTNALLLNKQRID-----MIKKGHIQLGISL 213 >gi|302541833|ref|ZP_07294175.1| putative radical SAM domain protein [Streptomyces hygroscopicus ATCC 53653] gi|302459451|gb|EFL22544.1| putative radical SAM domain protein [Streptomyces himastatinicus ATCC 53653] Length = 326 Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 13/149 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +LL + CPV C C + + + + ++ V +GG+P + Sbjct: 20 VLLFITDRCPVGCAHCSVDSRP--DSPRITDHALFASIVDQLAALPELRMVGISGGEPFV 77 Query: 157 LSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRIN--PELIQCLKEAGKPVYIAIHA 213 + L + L HV + R + P+ I + E VY++ A Sbjct: 78 -ERRALALAVTRLAAADKHVVLYTSG-----FW-ARSDHAPQWIHRVLEQSAAVYLSTDA 130 Query: 214 NHPYEFSEE-AIAAISRLANAGIILLSQS 241 +H E A +A G+ ++ Q+ Sbjct: 131 HHVASQGPERFRNAARIIARHGLPIVVQA 159 >gi|157737373|ref|YP_001490056.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri RM4018] gi|114461634|gb|ABI75082.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri] gi|157699227|gb|ABV67387.1| MiaB-like tRNA modifying enzyme [Arcobacter butzleri RM4018] Length = 422 Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 10/125 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C + G S + + E I TG + Sbjct: 139 KSRAFIKIQEGCDFRCSYCIIPYVRGD--ARSYSEDKILEQVTTLASN-GFGEFILTGTN 195 Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 K+ L K+LK + IK V+ +R S ++P +I+ E + + E ++ Sbjct: 196 VGSYGKKQHTSLAKLLKKMSLIKGVRRIRMGS----IEPIQIDDEFKEIINEPFMAKHLH 251 Query: 211 IHANH 215 I H Sbjct: 252 IALQH 256 >gi|189501679|ref|YP_001957396.1| hypothetical protein Aasi_0223 [Candidatus Amoebophilus asiaticus 5a2] gi|189497120|gb|ACE05667.1| hypothetical protein Aasi_0223 [Candidatus Amoebophilus asiaticus 5a2] Length = 441 Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 20/128 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R LK+ C +C FC S E+ + + I E++ TG Sbjct: 140 RTRTFLKVQDGCNYHCSFCTI-----PLARGKSRSDTIESIVEQARKIADQGIKEIVLTG 194 Query: 152 ---GDPLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 GD I+ ++R +++ L + ++ R S ++P + E+IQ + ++G+ Sbjct: 195 VNIGDYGIIDNRRQTNFLSLIEALEKVVDIKRFRISS----IEPNLLTDEIIQFVAQSGR 250 Query: 206 PVYIAIHA 213 H Sbjct: 251 ---FVPHF 255 >gi|329122066|ref|ZP_08250674.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister micraerophilus DSM 19965] gi|327466873|gb|EGF12389.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister micraerophilus DSM 19965] Length = 445 Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 21/126 (16%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG-- 151 R +K+ C YC FC + L S+ E A+ I++ + EV+ TG Sbjct: 155 RAFVKVQEGCDNYCTFC-----IIPYARGRLKSRKQEDAVDEIKKLVEKGYREVVLTGIH 209 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D + + L ++ L I ++ +R S ++ ++ ELI +K K Sbjct: 210 LGNYGKD--LRNGTSLSTLVSELLKIPNLLRIRLGS----IESVELSDELINIIKN-EKR 262 Query: 207 VYIAIH 212 V +H Sbjct: 263 VCHHLH 268 >gi|308172965|ref|YP_003919670.1| oxygen-independent coproporphyrinogen III oxidase [Bacillus amyloliquefaciens DSM 7] gi|307605829|emb|CBI42200.1| oxygen-independent coproporphyrinogen III oxidase, putative [Bacillus amyloliquefaciens DSM 7] gi|328552610|gb|AEB23102.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens TA208] Length = 500 Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 38/233 (16%), Positives = 81/233 (34%), Gaps = 45/233 (19%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131 I D + + + + + + CP C +C + + S Sbjct: 154 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 213 Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189 + ++++ ++ + F GG P ++ + + + + + R +V+ +R + V P Sbjct: 214 QKIGEWLKQHDIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPNVENIREIT-VEAGRP 272 Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 I E + L + + I P + E + AI R +V Sbjct: 273 DTITEEKLAVLNKYKIDRISIN-----PQSYENETLKAIGR---------HHTV------ 312 Query: 249 DDPEILAN--LMRTFVELRIKPYYLHHPDLA-----AGTSHFRLTIEEGQKIV 294 E + L R I + DL GT+ FR +++E +K++ Sbjct: 313 --EETIEKYHLSRKHGMNNI------NMDLIIGLPGEGTAEFRHSLDETEKLM 357 >gi|299136219|ref|ZP_07029403.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8] gi|298602343|gb|EFI58497.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8] Length = 370 Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 25/131 (19%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGT-------VLSSKDTEAALAYIQ------EK 141 D +L+K+ C + C +C+ V +Q T +S + E + + + Sbjct: 4 DTVLIKVASRCNINCSYCY----VYNQGDTSWQRMPKHMSFEIVEDVIRQLATLYRDQDH 59 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCL 200 + V+ GG+PL+L L+ +LK L + SR + I+ +L++ Sbjct: 60 P--FAVVLHGGEPLLLPRNILEALLKGLADCLPAT-----CSRSIQTNGTLIDDDLLELC 112 Query: 201 KEAGKPVYIAI 211 G + ++I Sbjct: 113 VRTGTTLSVSI 123 >gi|160946408|ref|ZP_02093617.1| hypothetical protein PEPMIC_00368 [Parvimonas micra ATCC 33270] gi|158447524|gb|EDP24519.1| hypothetical protein PEPMIC_00368 [Parvimonas micra ATCC 33270] Length = 480 Score = 45.9 bits (108), Expect = 0.010, Method: Composition-based stats. Identities = 25/156 (16%), Positives = 57/156 (36%), Gaps = 25/156 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + L C CR CF + + G ++ + + + + V+ TGG+PL+ Sbjct: 127 MVLTTKCNFRCRHCFIK---NNSDGFTMNFLLWKRIIDKL-CNQGLTSVVVTGGEPLLYK 182 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 L + + + L H + + I+ I+ +++ V + + + Sbjct: 183 E------LTPILNYINDKKLNIH---LLTNGYLIDDNFIEEIRKF-NNVIVQVSLDGSNS 232 Query: 219 FS-----------EEAIAAISRLANAGIILLSQSVL 243 + + I +L ++GI++ VL Sbjct: 233 ITQKYQRLIENSFDVVTKNIKKLTDSGIVVNVAMVL 268 >gi|94263035|ref|ZP_01286854.1| Radical SAM:Molybdenum cofactor synthesis-like [delta proteobacterium MLMS-1] gi|93456578|gb|EAT06686.1| Radical SAM:Molybdenum cofactor synthesis-like [delta proteobacterium MLMS-1] Length = 338 Score = 45.9 bits (108), Expect = 0.011, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 79/224 (35%), Gaps = 39/224 (17%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L + C + CR+C + + +LS ++ E + + I +V TGG+PL+ Sbjct: 25 VRLAVTDRCNLNCRYCRPKGPCEEPRRELLSYEELERLVRLLVAM-GISKVRLTGGEPLV 83 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + + LR I ++ L + + ++ ++ L+ +G + + + Sbjct: 84 --RHGMIAFMGRLRAIAGLEQLALTTNA-TLLASHLDD--LRQLRLSGLNISLDT-LSAA 137 Query: 217 Y-------EFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRT-------- 260 + I GI L +V+ +GIN D+ LA L Sbjct: 138 RFATITGQDLFGRVFKVIEAALATGIPLKINAVVQEGINTDELLDLARLAEKWPLEVRYI 197 Query: 261 ---------FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 DLA +HF+ + E +IV Sbjct: 198 EPMPFAGRDEFSAG-------QWDLARLRAHFQANLPELTEIVR 234 >gi|323486972|ref|ZP_08092287.1| hypothetical protein HMPREF9474_04038 [Clostridium symbiosum WAL-14163] gi|323399744|gb|EGA92127.1| hypothetical protein HMPREF9474_04038 [Clostridium symbiosum WAL-14163] Length = 450 Score = 45.9 bits (108), Expect = 0.011, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 38/162 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q + T + Sbjct: 82 LMSDYRSCRNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 131 Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 K + +++K L I + S ++CL +H Sbjct: 132 KDKDIDRIIKYRLAPI----NISVQS----------TNPELRCL---------MLH---- 164 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 F+ +A+ I L A I + Q VL K +ND E+ ++ Sbjct: 165 NRFAGDALKKIDTLYEAEIPMNGQIVLCKNVNDKEELERSIR 206 >gi|313891670|ref|ZP_07825277.1| tRNA methylthiotransferase YqeV [Dialister microaerophilus UPII 345-E] gi|313119948|gb|EFR43133.1| tRNA methylthiotransferase YqeV [Dialister microaerophilus UPII 345-E] Length = 445 Score = 45.9 bits (108), Expect = 0.011, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 21/126 (16%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG-- 151 R +K+ C YC FC + L S+ E A+ I++ + EV+ TG Sbjct: 155 RAFVKVQEGCDNYCTFC-----IIPYARGRLKSRKQEDAVDEIKKLVEKGYREVVLTGIH 209 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D + + L ++ L I ++ +R S ++ ++ ELI +K K Sbjct: 210 LGNYGKD--LRNGTSLSTLVSELLKIPNLLRIRLGS----IESVELSDELINIIKN-EKR 262 Query: 207 VYIAIH 212 V +H Sbjct: 263 VCHHLH 268 >gi|197118653|ref|YP_002139080.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem] gi|197088013|gb|ACH39284.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem] Length = 326 Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 55/237 (23%), Positives = 93/237 (39%), Gaps = 62/237 (26%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + CR+C E V VLS D ++ + I ++ TGG+PL+ Sbjct: 16 LSVTDRCNLRCRYCMPEEGVEKLDHSQVLSYADLLR-ISTEAVAAGIEKIRVTGGEPLV- 73 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216 K + L+ L + ++ L + + E+ Q L+EAG + I++ Sbjct: 74 -RKGIISFLERLGALPGLKELVLTTNGL------LLKEMAQGLREAGVQRLNISL----- 121 Query: 217 YEFSEEAIAAISR---LAN----------AG-----IILLSQSVLLKGINDDPEIL--AN 256 E AAI+R L AG I + V+++G+NDD EIL Sbjct: 122 DSLKPETFAAITRGGELKRVLDGLEAAEKAGFPPHKINV----VVMRGVNDD-EILDFVE 176 Query: 257 LMRTFVELRIKPY------YLHHPDLAAGTSHFR---LTIEEGQKIV--ASLKEKIS 302 L +PY Y+ G + +R + E ++ + L E++S Sbjct: 177 LTMK------RPYAVRFIEYM----PTCGDADWRELCVPGAEIRERIGERYLIEEVS 223 >gi|323692019|ref|ZP_08106267.1| PDZ domain-containing protein [Clostridium symbiosum WAL-14673] gi|323503942|gb|EGB19756.1| PDZ domain-containing protein [Clostridium symbiosum WAL-14673] Length = 450 Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 38/162 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q + T + Sbjct: 82 LMSDYRSCRNKCIFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 131 Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 K + +++K L I + S ++CL +H Sbjct: 132 KDKDIDRIIKYRLAPI----NISVQS----------TNPELRCL---------MLH---- 164 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 F+ +A+ I L A I + Q VL K +ND E+ ++ Sbjct: 165 NRFAGDALKKIDTLYEAEIPMNGQIVLCKNVNDKEELERSIR 206 >gi|258514903|ref|YP_003191125.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778608|gb|ACV62502.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 358 Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 31/154 (20%), Positives = 48/154 (31%), Gaps = 39/154 (25%) Query: 90 VHRYPDRILLKL-------LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 +P+R + + +VC CRFC Q + I E Sbjct: 46 QRLHPERQVTFVIDRNINYTNVCLSRCRFC---AFYRDQNAPDAYIIGWQELYEKIAETV 102 Query: 143 QI--WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 E++ GG + L L LRYIK + HS P PE++ + Sbjct: 103 DAGGTELLIQGG---LHPDLTLDYYLDMLRYIKSNFDIHIHSFSP--------PEVMHMV 151 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 K +G + + +L AG Sbjct: 152 KGSGLSI----------------KEVLEKLRAAG 169 >gi|302874736|ref|YP_003843369.1| hypothetical protein Clocel_1861 [Clostridium cellulovorans 743B] gi|307690649|ref|ZP_07633095.1| hypothetical protein Ccel74_21016 [Clostridium cellulovorans 743B] gi|302577593|gb|ADL51605.1| protein of unknown function DUF512 [Clostridium cellulovorans 743B] Length = 443 Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 28/161 (17%), Positives = 60/161 (37%), Gaps = 52/161 (32%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C C FCF ++ + T+ D ++ L+++Q + T + + Sbjct: 86 SCHNKCIFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FITLT-----NMKDDDID 135 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP------- 216 ++++ RI+ P+ +++H +P Sbjct: 136 RIIR----------------------YRIS------------PINVSVHTTNPELRREML 161 Query: 217 -YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 F+ E + + +LA+AGI + +Q VL IN+ E++ Sbjct: 162 NNRFAGELMEKLKKLADAGITINTQIVLCPEINNGEELVRT 202 >gi|162451211|ref|YP_001613578.1| hypothetical protein sce2939 [Sorangium cellulosum 'So ce 56'] gi|161161793|emb|CAN93098.1| moaA3 [Sorangium cellulosum 'So ce 56'] Length = 373 Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 38/241 (15%), Positives = 74/241 (30%), Gaps = 42/241 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + + + C C +C G L + ++ + I V TGG+ Sbjct: 58 PRSVRISVTDRCDFACTYCRPSRHDG-YADGKLMTAAWRTMFEALR-DAGIRRVRLTGGE 115 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+ + ++ L + + + ++ + ++I Sbjct: 116 PLLHP--EIVSIVGCLAALGFEDL------ALTTNASQLARLAGALRAAGLHRLNVSIDT 167 Query: 214 NHPYEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVEL 264 P F E I AG + +V+L+G+NDD L E Sbjct: 168 LDPGRFGEMTRGGELARVLDGIDAAIAAGFSPIKLNTVVLRGVNDDEIERLALWA--WER 225 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIV-------ASLKEKISGLCQPFYILDLPGGY 317 R+ P + I EG ++V A ++ +++ P + Sbjct: 226 RMVP--RFLEVM---------PIAEGARLVGKHLVTAAEMRARLAEHLLPE---EAAAEP 271 Query: 318 G 318 G Sbjct: 272 G 272 >gi|283954557|ref|ZP_06372076.1| hypothetical protein C414_000230057 [Campylobacter jejuni subsp. jejuni 414] gi|283793961|gb|EFC32711.1| hypothetical protein C414_000230057 [Campylobacter jejuni subsp. jejuni 414] Length = 417 Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 18/132 (13%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + T+L + A Y E++ Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKTLLKQVEILGANGY-------SEIVL 184 Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L + L K+L+ + I ++ +R S ++P +I+ ++ L EA Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDEAWLE 240 Query: 207 VYIAIHANHPYE 218 ++ I H E Sbjct: 241 RHLHIALQHTSE 252 >gi|310826527|ref|YP_003958884.1| 2-methylthioadenine synthetase [Eubacterium limosum KIST612] gi|308738261|gb|ADO35921.1| 2-methylthioadenine synthetase [Eubacterium limosum KIST612] Length = 435 Score = 45.5 bits (107), Expect = 0.011, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 52/146 (35%), Gaps = 15/146 (10%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSS 128 D + ++++ L + R LK+ C +C +C R + VLS Sbjct: 123 FVSDIMREHHYEDLNITETKGKTRAFLKVQEGCNQFCTYCIVPFARGPVRSRPVDAVLSE 182 Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIV 187 AA Y + + G D L L +++ + ++ V+ +R S + Sbjct: 183 VKRVAAHGYAEVVLTGIHIASYGVD---LGDGVDLLSLIRAVDKVEGVKRIRLGS----L 235 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHA 213 +P + E +Q L E H Sbjct: 236 EPLLLTEEFVQGLSEVR---AFCPHF 258 >gi|227872811|ref|ZP_03991125.1| 2-methylthioadenine synthase [Oribacterium sinus F0268] gi|227841338|gb|EEJ51654.1| 2-methylthioadenine synthase [Oribacterium sinus F0268] Length = 478 Score = 45.5 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 32/168 (19%) Query: 66 ELNILPEEREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E + P E P+ + + L + R +K+ C +C +C +G Sbjct: 124 ENDASPMEPFSPVREEGEYENLFLSKPKDKSRAFVKVQDGCNQFCAYCIIPY----VRGR 179 Query: 125 VLSSKDTEAALAYIQ--EKSQIWEVIFTGG-------DPLILSHKR----------LQKV 165 + S K+ E L I+ K EV+ TG D LS++ L + Sbjct: 180 IRSRKE-EDCLEEIRHLAKEGFQEVVLTGIHLSSYGLDFENLSYEYASRKAETGEALLHL 238 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + + I +Q +R S ++P+ I + LKE I H Sbjct: 239 ISEVGKIPGIQRIRLGS----LEPRIITERFLAGLKEVE---AICPHF 279 >gi|228474586|ref|ZP_04059317.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis SK119] gi|228271249|gb|EEK12617.1| molybdenum cofactor biosynthesis protein A [Staphylococcus hominis SK119] Length = 340 Score = 45.5 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 44/177 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G K +L+ + +A + + + ++ TGG+ Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDFVFLPKEELLTFDEITT-IAKVYAELGVKKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ L K+++ L I+ ++ + + LK+ G+ +Y Sbjct: 77 PLLRRD--LYKLIEKLNRIEGIEDIGMTTNGL-------------LLKKHGQKLYDAGLR 121 Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250 I + + +E AI+ +L Q V+ KGINDD Sbjct: 122 RINVSLDA---IDDEVFQAINNRNIKASTILQQIDYAVSIGFHVKVNVVIQKGINDD 175 >gi|123485105|ref|XP_001324419.1| radical SAM domain containing protein [Trichomonas vaginalis G3] gi|121907301|gb|EAY12196.1| radical SAM domain containing protein [Trichomonas vaginalis G3] Length = 296 Score = 45.5 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 15/70 (21%), Positives = 31/70 (44%), Gaps = 3/70 (4%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + L C +C+FCF R G + + L ++ + I + + + F GG+P Sbjct: 6 TVNIHYLRSCNYHCKFCFHR---GIENSSTLKLEEWHKIIDTIAKSGLVKRINFAGGEPF 62 Query: 156 ILSHKRLQKV 165 +L + + Sbjct: 63 MLRKHIVDLI 72 >gi|162453511|ref|YP_001615878.1| hypothetical protein sce5235 [Sorangium cellulosum 'So ce 56'] gi|161164093|emb|CAN95398.1| hypothetical protein sce5235 [Sorangium cellulosum 'So ce 56'] Length = 423 Score = 45.5 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 61/156 (39%), Gaps = 18/156 (11%) Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P + E R D + + R +L + + C C FCF + + Sbjct: 116 VPTRHEEITAEAFRLD-----DAGLIDWAQCRPRSISVLPVANACQARCAFCFSKA--SA 168 Query: 121 QKGTVLSSKDTEAALAYIQEKSQI---WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 S E L + + + VI GG+P +L +RL+ +++ L + Sbjct: 169 SDLARQQSATLERYLDWARRAKERGAERAVITGGGEPTLLEPERLRALVRGLSEL----- 223 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIH 212 F + I + R++ ++ L++AG + ++ H Sbjct: 224 --FPKSLLITNGARLDLAQVEELRDAGLTTLAVSRH 257 >gi|78187401|ref|YP_375444.1| Elongator protein 3/MiaB/NifB [Chlorobium luteolum DSM 273] gi|78167303|gb|ABB24401.1| GTP cyclohydrolase subunit MoaA [Chlorobium luteolum DSM 273] Length = 339 Score = 45.5 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 24/179 (13%) Query: 86 LKGIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 + + R+ RI + L +C + C +C R E ++S + A + + Sbjct: 8 IPQLEDRFQRRITYARIALTRLCNLRCSYCMREEHESGTAAAMMSFSEVTAIIRALAAM- 66 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 I +V TGG+PL+ + + ++ + ++ + + + + L E Sbjct: 67 GIKKVRLTGGEPLLRND--ISDIVLAAKQTPGIEKVTLTTNG------LLLDRHLDRLLE 118 Query: 203 AGKPVYIAIHANH--PYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 AG I I + P + A A + RL G + + V+L+G+NDD Sbjct: 119 AGID-AINISIDSLQPKRYQAIARRDEYSRVKANLDRLIGIGTVPVKINVVMLRGVNDD 176 >gi|260911507|ref|ZP_05918095.1| Fe-S oxidoreductase [Prevotella sp. oral taxon 472 str. F0295] gi|260634371|gb|EEX52473.1| Fe-S oxidoreductase [Prevotella sp. oral taxon 472 str. F0295] Length = 446 Score = 45.5 bits (107), Expect = 0.012, Method: Composition-based stats. Identities = 40/218 (18%), Positives = 70/218 (32%), Gaps = 42/218 (19%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C S + A E++ TG + Sbjct: 153 RTRYFLKVQDGCDYFCTYCTI-PFARGFSRNPSISSLVQQAQD--AANEGGKEIVLTGVN 209 Query: 154 PLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 ++R ++K L ++ +Q R S ++P + ELI + Sbjct: 210 IGEFKGEGNERFIDLVKALDQVEGIQRFRISS----IEPNLLTDELIDYCATSR---AFM 262 Query: 211 IHANHP-YEFSEEAIAAISR-----LANAGIILLSQ-----------SVLLKG-----IN 248 H + P S+E + + R L + L+ Q V +G Sbjct: 263 PHFHIPLQSGSDEVLKLMQRRYDTALFAHKVQLIKQRIPNAFIGVDVMVGSRGEEPAYFE 322 Query: 249 DDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT 286 D L +L +L + PY GT+ R+ Sbjct: 323 DCYNFLKSL--DISQLHVFPYS-----ERPGTAALRIP 353 >gi|260437149|ref|ZP_05790965.1| RNA modification enzyme, MiaB family [Butyrivibrio crossotus DSM 2876] gi|292810461|gb|EFF69666.1| RNA modification enzyme, MiaB family [Butyrivibrio crossotus DSM 2876] Length = 439 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 30/148 (20%), Positives = 60/148 (40%), Gaps = 19/148 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIFTGG 152 LK+ C +C +C + G+ + + + Y+ + ++ E+ G Sbjct: 147 LKIAEGCDKHCTYCSIPMIRGAYR--SVPMDELVKEAEYLADNGVKELIIVAQEITVYGK 204 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211 D + K+L ++L L I +Q +R P+ I ELI+ ++ K YI + Sbjct: 205 D--LYGEKKLPELLHRLCKIPGIQWIRL----LYCYPEEITDELIETIRTEKKICHYIDM 258 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLS 239 H S++ + A+ R + L + Sbjct: 259 PIQHA---SDKILKAMGR-RTNNVELRN 282 >gi|257062817|ref|YP_003142489.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] gi|256790470|gb|ACV21140.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] Length = 321 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 47/234 (20%), Positives = 88/234 (37%), Gaps = 46/234 (19%) Query: 99 LKLLHVCPVY-CRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPL 155 L + CP C FC F + M + + +D EA LA + E I G G+PL Sbjct: 19 LPVAKGCPYNKCAFCDFYKHMTYRE----IPLEDIEAELARVSNAGGKPERIMLGDGNPL 74 Query: 156 ILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI----- 209 L RL+K+++ + + + L + V ++ + + + L G + Sbjct: 75 WLPFDRLKKIVEMIEHYLPSCTTLCSDASVLAIESK--TDDELAWLARHGYRMAYVGIES 132 Query: 210 ----AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLL-------KGINDDPEILANLM 258 + +++A I+RL AGI + ++ +GI + A L+ Sbjct: 133 GLDDVLEFMDKDHLNDQAREQIARLHKAGIDFGAH--IITGAAGNGRGIE-NARATAALI 189 Query: 259 RTFVELRIKPYYLHHPDL---AAGTSHFRLTIEEG-------QKIVASLKEKIS 302 +P +H D A + L E+G + + ++E +S Sbjct: 190 NEL-----RP--VHICDFSLYVASVTELGLKEEDGEFVRASMLENMREMREFVS 236 >gi|40063022|gb|AAR37878.1| molybdenum cofactor biosynthesis protein A [uncultured marine bacterium 560] Length = 331 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 20/162 (12%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C C +C + + VLS ++ + E + +V TGG+PL L Sbjct: 17 VSVTDHCNYRCHYCRDEDHQTHTTRSEVLSFEEIVKIVRLFAE-LGVTKVRLTGGEPL-L 74 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 L + + L I + + +P+ + P LK G V I+I + P Sbjct: 75 RRDILD-LTRMLGDIPGL------TEIPLSTNAHLLPSFAGKLKNHGINRVNISIDSLIP 127 Query: 217 ---YEFSEE-----AIAAISRLANAGI-ILLSQSVLLKGIND 249 E + + I I AG+ + V++KGIND Sbjct: 128 ERFKEITRDGDLAKVIKGIDAAIAAGMSPVKLNMVVMKGIND 169 >gi|170702587|ref|ZP_02893460.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria IOP40-10] gi|170132498|gb|EDT00953.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria IOP40-10] Length = 372 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 48/248 (19%), Positives = 87/248 (35%), Gaps = 61/248 (24%) Query: 85 PLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE-- 140 PL + P R L L ++ C C +C R+ G + SS+ A L I Sbjct: 31 PLDTLAR--PLRDLRLSVIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAF 88 Query: 141 -KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV--------------------QILR 179 + ++ TGG+PL+ + L +++ L + V + LR Sbjct: 89 ISLGVEKIRLTGGEPLL--RRNLGALIERLATLTTVDGKPVEIALTTNGSLLAAKARSLR 146 Query: 180 FH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-II 236 SRV + I+ + + + +A PV + A I AG Sbjct: 147 DAGLSRVTVSL-DAIDDAVFRRMSDADVPVARVL-------------AGIEAAQAAGLAP 192 Query: 237 LLSQSVLLKGINDDPEILANLMRTFVELRI----KPYYLHHPDLAAGTSHFR----LTIE 288 + +V+ +G NDD + L+R F + Y G S + + Sbjct: 193 VKVNAVIERGANDD--QILPLVRHFRHSGVAVRFIEY-----MDVGGASAWSGDKVVPAT 245 Query: 289 EGQKIVAS 296 ++++ + Sbjct: 246 RMRELIEA 253 >gi|297584652|ref|YP_003700432.1| RNA modification enzyme, MiaB family [Bacillus selenitireducens MLS10] gi|297143109|gb|ADH99866.1| RNA modification enzyme, MiaB family [Bacillus selenitireducens MLS10] Length = 441 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + A ++ E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRKP-EDVLSQANQLVEA--GYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D + L +L+ L I+ ++ +R S ++ +I E+I+ + + K Sbjct: 199 TGGYGED---MKDYNLAGLLRDLETIEGLRRIRISS----IEASQITDEVIEVINRSDK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVNHLHI 257 >gi|118602689|ref|YP_903904.1| GTP cyclohydrolase subunit MoaA [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|118567628|gb|ABL02433.1| GTP cyclohydrolase subunit MoaA [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 331 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 24/165 (14%) Query: 99 LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L + C C +C R ++ +LS +D E + + I +V TGG+PL+ Sbjct: 17 LSVTEHCNYRCFYC-RDDEHKPNCKRKDILSYEDIEKIVQLFAQ-LGITKVRLTGGEPLL 74 Query: 157 LS-HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214 ++ K++ + I V P+ + + + L + G V I+I + Sbjct: 75 RRGISKIAKLVSRIDGIDDV---------PLSTNAHLLEKFAKKLYQNGINRVNISIDSL 125 Query: 215 HPY---EFSE-----EAIAAISRLANAG-IILLSQSVLLKGINDD 250 P E + + I G + V ++G+NDD Sbjct: 126 IPKRFEEITHGGDLIQVTKGIDAAIQTGMAPIKINVVTMRGVNDD 170 >gi|50843535|ref|YP_056762.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III oxidase [Propionibacterium acnes KPA171202] gi|50841137|gb|AAT83804.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III oxidase [Propionibacterium acnes KPA171202] Length = 426 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 34/208 (16%), Positives = 66/208 (31%), Gaps = 45/208 (21%) Query: 93 YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 P ++ ++ C + C+ C + Q + +Y + + I Sbjct: 45 KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELINQLTSYERPYPML---IL 101 Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 TGGD L +++ + HV I P V P + ++ ++EAG + Sbjct: 102 TGGDCFERPD--LVDLIEYAVSKGLHVSI------SPSVTP-LFTRDRVRAVQEAGVSIM 152 Query: 209 IA--------IH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDD 250 H +H + A L G+ +V K I++ Sbjct: 153 SMSLDGGSATTHDAFRGFPGTFDH-------TVEACHMLRELGMKFQLNTVFTAKNIHEA 205 Query: 251 PEILANLMRTFVELRIKPYYLHHPDLAA 278 P++L N ++L +Y Sbjct: 206 PQMLKNA----IDLGAMMFYTFMLVPTG 229 >gi|300854432|ref|YP_003779416.1| hypothetical protein CLJU_c12460 [Clostridium ljungdahlii DSM 13528] gi|300434547|gb|ADK14314.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528] Length = 444 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 39/205 (19%), Positives = 71/205 (34%), Gaps = 58/205 (28%) Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 E+ E D + + G+ P ++ C C FCF +M + T+ Sbjct: 51 EIEKQSGEVWDLEIEKEYDEELGLEFEEP---IIDKPKSCHNKCIFCFIDQMPKGMRDTL 107 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 D ++ LA++Q V T ++ + + +++K Sbjct: 108 YFKDD-DSRLAFLQGN----FVTLT-----NMNDEEIDRIIK------------------ 139 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHANHP--------YEFSEEAIAAISRLANAGIIL 237 RI+ P+ +++H +P +F+ + RL GI + Sbjct: 140 ----YRIS------------PINVSVHTTNPDLRIKMINNKFAGNIYTLLKRLTQNGIKI 183 Query: 238 LSQSVLLKGINDDPE---ILANLMR 259 Q VL GIND E + +L R Sbjct: 184 NCQIVLCPGINDGAEFKRTVEDLYR 208 >gi|319400912|gb|EFV89131.1| RNA modification enzyme, MiaB family protein [Staphylococcus epidermidis FRI909] Length = 448 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L I+ ++ +R S ++ ++ E+I + + K Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|288927648|ref|ZP_06421495.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 317 str. F0108] gi|288330482|gb|EFC69066.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 317 str. F0108] Length = 446 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 53/156 (33%), Gaps = 19/156 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C + + A E++ TG + Sbjct: 153 RTRYFLKVQDGCDYFCTYCTI-PFARGFSRNPSIASLVQQAHD--AANDGGKEIVLTGVN 209 Query: 154 PLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 ++R ++K L ++ +Q R S ++P + ELI + Sbjct: 210 IGEFKGGGNERFIDLVKALDQVEGIQRFRISS----IEPNLLTDELIDYCASSR---AFM 262 Query: 211 IHANHP-YEFSEEAIAAISR-----LANAGIILLSQ 240 H + P S+E + + R L + L+ Q Sbjct: 263 PHFHIPLQSGSDEVLKLMQRRYDTALFAHKVQLIKQ 298 >gi|311067471|ref|YP_003972394.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942] gi|310867988|gb|ADP31463.1| coproporphyrinogen III oxidase [Bacillus atrophaeus 1942] Length = 500 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 15/161 (9%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDT 131 I D + + + + + + CP C +C F + Q G V S + Sbjct: 154 IVDRQLAAVPDLYQVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHFEI 213 Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189 + +++ ++ + F GG P ++ + + + + + R V+ +R + V P Sbjct: 214 QKIGEWLKRHEIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKQIREIT-VEAGRP 272 Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 I E + L + + I P + E + AI R Sbjct: 273 DTITEEKLDVLNKYHIDRISIN-----PQSYENETLKAIGR 308 >gi|262369704|ref|ZP_06063032.1| molybdopterin biosynthesis protein [Acinetobacter johnsonii SH046] gi|262315772|gb|EEY96811.1| molybdopterin biosynthesis protein [Acinetobacter johnsonii SH046] Length = 339 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 63/161 (39%), Gaps = 17/161 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C +K +LS ++ ++ + I ++ TGG+PL+ Sbjct: 23 ISVTDRCNFKCVYCMPEHPEWMKKHDLLSFEELYHFCKFMVQH-GIEQIRITGGEPLM-- 79 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAI------ 211 + + ++ L+ +K + R + + LK+AG + I++ Sbjct: 80 RQGVVHFIEQLQSLKKQGLKRIS----MTTNGHYLKQYAAALKQAGLDDLNISLDSLDAE 135 Query: 212 HANH--PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + + I G + +VL+KGINDD Sbjct: 136 QFQHLTKKQLHT-VLEGIQVAQQVGFNIKINTVLMKGINDD 175 >gi|239637612|ref|ZP_04678584.1| conserved hypothetical protein [Staphylococcus warneri L37603] gi|239596830|gb|EEQ79355.1| conserved hypothetical protein [Staphylococcus warneri L37603] Length = 448 Score = 45.5 bits (107), Expect = 0.013, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + + E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATTLV--NAGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L + ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDQVDGLERIRISS----IEASQLTDEVIDVLERSNK- 250 Query: 207 VYIAIHA 213 + +H Sbjct: 251 IVRHLHV 257 >gi|330686099|gb|EGG97720.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU121] Length = 448 Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + + E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATTLV--NAGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L + ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDQVDGLERIRISS----IEASQLTDEVIDVLERSNK- 250 Query: 207 VYIAIHA 213 + +H Sbjct: 251 IVRHLHV 257 >gi|89895872|ref|YP_519359.1| hypothetical protein DSY3126 [Desulfitobacterium hafniense Y51] gi|89335320|dbj|BAE84915.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 441 Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 50/139 (35%), Gaps = 25/139 (17%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA----ALAYIQEK 141 L I R LK+ C +C +C G + + + TEA A Y Sbjct: 144 LPLIEEESRTRATLKIQEGCNQFCTYCIIPYARGPVRSRIPENAVTEAEKLVAAGY---- 199 Query: 142 SQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 E++ T G D + L +++K L IK + LR S ++P P Sbjct: 200 ---KEIVLTGIHTGSYGED--LGEDWDLARLVKALAQIKGLHRLRLSS----IEPMEFTP 250 Query: 195 ELIQCLKEAGKPVYIAIHA 213 ELI + V +H Sbjct: 251 ELIDVIINYP-AVCPHLHI 268 >gi|163942456|ref|YP_001647340.1| molybdenum cofactor biosynthesis protein A [Bacillus weihenstephanensis KBAB4] gi|163864653|gb|ABY45712.1| molybdenum cofactor biosynthesis protein A [Bacillus weihenstephanensis KBAB4] Length = 337 Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C + C +C E+ G +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K+++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LAKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ + I AG+ + V+ KG+ND Sbjct: 129 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 175 >gi|219670301|ref|YP_002460736.1| RNA modification enzyme, MiaB family [Desulfitobacterium hafniense DCB-2] gi|219540561|gb|ACL22300.1| RNA modification enzyme, MiaB family [Desulfitobacterium hafniense DCB-2] Length = 439 Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 33/139 (23%), Positives = 50/139 (35%), Gaps = 25/139 (17%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA----ALAYIQEK 141 L I R LK+ C +C +C G + + + TEA A Y Sbjct: 142 LPLIEEESRTRATLKIQEGCNQFCTYCIIPYARGPVRSRIPENAVTEAEKLVAAGY---- 197 Query: 142 SQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 E++ T G D + L +++K L IK + LR S ++P P Sbjct: 198 ---KEIVLTGIHTGSYGED--LGEDWDLARLVKALAQIKGLHRLRLSS----IEPMEFTP 248 Query: 195 ELIQCLKEAGKPVYIAIHA 213 ELI + V +H Sbjct: 249 ELIDVIINYP-AVCPHLHI 266 >gi|296133939|ref|YP_003641186.1| RNA modification enzyme, MiaB family [Thermincola sp. JR] gi|296032517|gb|ADG83285.1| RNA modification enzyme, MiaB family [Thermincola potens JR] Length = 445 Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 53/145 (36%), Gaps = 17/145 (11%) Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD--TE 132 +D + L + + R LK+ C +C +C + ++ +D Sbjct: 123 KDIMQAREFEELPVLDYESRTRAFLKIQEGCNNFCTYCI---IPYARGPVRSRKRDNVIT 179 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIV 187 A + E E++ TG R L ++ L IK ++ LR S V Sbjct: 180 EAERLVGE--GFREIVLTGIHIGAYGRDRDDGYDLAALVADLARIKGLRRLRLGS----V 233 Query: 188 DPQRINPELIQCLKEAGKPVYIAIH 212 +P+ + P LI + + + +H Sbjct: 234 EPEDVTPHLIATMADNRV-ICRHLH 257 >gi|242242851|ref|ZP_04797296.1| 2-methylthioadenine synthase [Staphylococcus epidermidis W23144] gi|242233693|gb|EES36005.1| 2-methylthioadenine synthase [Staphylococcus epidermidis W23144] Length = 451 Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 201 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L I+ ++ +R S ++ ++ E+I + + K Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 253 Query: 207 VYIAIHA 213 V +H Sbjct: 254 VVRHLHI 260 >gi|30263518|ref|NP_845895.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Ames] gi|47528911|ref|YP_020260.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. 'Ames Ancestor'] gi|49186368|ref|YP_029620.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Sterne] gi|65320845|ref|ZP_00393804.1| COG2896: Molybdenum cofactor biosynthesis enzyme [Bacillus anthracis str. A2012] gi|165871039|ref|ZP_02215690.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0488] gi|167636277|ref|ZP_02394579.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0442] gi|167640544|ref|ZP_02398806.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0193] gi|170688439|ref|ZP_02879647.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0465] gi|170708165|ref|ZP_02898612.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0389] gi|177652522|ref|ZP_02934989.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0174] gi|190564908|ref|ZP_03017829.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis Tsiankovskii-I] gi|227813602|ref|YP_002813611.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. CDC 684] gi|229603477|ref|YP_002867763.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0248] gi|254686135|ref|ZP_05149994.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. CNEVA-9066] gi|254723532|ref|ZP_05185320.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A1055] gi|254738607|ref|ZP_05196310.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Western North America USA6153] gi|254744833|ref|ZP_05202511.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Kruger B] gi|254752925|ref|ZP_05204961.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Vollum] gi|254759197|ref|ZP_05211223.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Australia 94] gi|254811535|sp|C3LA56|MOAA_BACAC RecName: Full=Molybdenum cofactor biosynthesis protein A gi|30258153|gb|AAP27381.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Ames] gi|47504059|gb|AAT32735.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. 'Ames Ancestor'] gi|49180295|gb|AAT55671.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Sterne] gi|164713250|gb|EDR18776.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0488] gi|167511412|gb|EDR86796.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0193] gi|167528300|gb|EDR91072.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0442] gi|170126973|gb|EDS95853.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0389] gi|170667609|gb|EDT18364.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0465] gi|172082196|gb|EDT67263.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0174] gi|190564225|gb|EDV18189.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis Tsiankovskii-I] gi|227006379|gb|ACP16122.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. CDC 684] gi|229267885|gb|ACQ49522.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0248] Length = 338 Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L + V+ + Sbjct: 77 PLL--RRGLPQLIERLNKVDGVEDI 99 >gi|251810993|ref|ZP_04825466.1| 2-methylthioadenine synthase [Staphylococcus epidermidis BCM-HMP0060] gi|293366463|ref|ZP_06613140.1| Fe-S oxidoreductase [Staphylococcus epidermidis M23864:W2(grey)] gi|251805503|gb|EES58160.1| 2-methylthioadenine synthase [Staphylococcus epidermidis BCM-HMP0060] gi|291319232|gb|EFE59601.1| Fe-S oxidoreductase [Staphylococcus epidermidis M23864:W2(grey)] Length = 451 Score = 45.5 bits (107), Expect = 0.014, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 201 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L I+ ++ +R S ++ ++ E+I + + K Sbjct: 202 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 253 Query: 207 VYIAIHA 213 V +H Sbjct: 254 VVRHLHI 260 >gi|295094897|emb|CBK83988.1| Fe-S oxidoreductase, related to NifB/MoaA family [Coprococcus sp. ART55/1] Length = 436 Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 56/162 (34%), Gaps = 38/162 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF + + T+ D ++ L+++Q + T + Sbjct: 80 LMDNYKSCYNKCIFCFIDQNPKGMRDTIYFKDD-DSRLSFLQGN----YITLT-----NM 129 Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 K + +++ L I + H+ P L+ + Sbjct: 130 KEKDIDRIINYHLAPI----NISVHTTNP-------------KLRCSMLN---------- 162 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 F+ + I + AGI + Q VL KGIND E+ + Sbjct: 163 NRFAGAILDYIRKFYEAGIPMNGQIVLCKGINDGEELWRTIS 204 >gi|294013183|ref|YP_003546643.1| putative radical SAM [Sphingobium japonicum UT26S] gi|292676513|dbj|BAI98031.1| putative radical SAM [Sphingobium japonicum UT26S] Length = 382 Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 41/96 (42%), Gaps = 8/96 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREM---VGSQKGTVLSSKDTEAALAYIQEKSQIW----EV 147 D +LLK+ C + C +C+ M + +S +A + ++ + V Sbjct: 12 DTVLLKVASRCNLDCSYCYVYHMGDNAWRDQPKQMSDAVLDAVARRLADQYALQAVPFSV 71 Query: 148 IFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHS 182 + GG+PL+L +L++ LR + H + + Sbjct: 72 VLHGGEPLLLGVAKLERFCAKLRDALPHPCGIHIQT 107 >gi|260589077|ref|ZP_05854990.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583] gi|331082507|ref|ZP_08331632.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium 6_1_63FAA] gi|260540497|gb|EEX21066.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583] gi|330400485|gb|EGG80115.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium 6_1_63FAA] Length = 434 Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 46/127 (36%), Gaps = 21/127 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C V + + + E L K+ E + TG Sbjct: 143 HTRAYLKVQDGCNQFCSYCII-PYVRGRVRSRRKEEVLEEVLR--LTKNGYQEFVLTGIH 199 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L +++K + I+ V+ +R S ++P+ I E Q L K Sbjct: 200 LSSYGVDC----EDNLLELIKAVHEIEGVKRIRLGS----LEPRIITEEFAQALGNMPK- 250 Query: 207 VYIAIHA 213 I H Sbjct: 251 --ICPHF 255 >gi|117924506|ref|YP_865123.1| nitrogenase cofactor biosynthesis protein NifB [Magnetococcus sp. MC-1] gi|117608262|gb|ABK43717.1| nitrogenase cofactor biosynthesis protein NifB [Magnetococcus sp. MC-1] Length = 464 Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 39/214 (18%), Positives = 69/214 (32%), Gaps = 49/214 (22%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGS 120 ++ P +D H+Y R+ L + C + C +C R+ G Sbjct: 14 VDTHPCFSKDA------------HHKYA-RMHLAVAPACNIQCNYCNRKYDCANESRPGV 60 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + E A + Q+ V G GDPL + + + +Q+ Sbjct: 61 VSELLTPQQAVEKVRAVKAKIPQLTVVGIAGPGDPLANPARTFETCERIAAEFPELQLC- 119 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--------------HANHPYEFSEEAIA 225 + PQ + E I+ L + I H N + A Sbjct: 120 LSTNGL-TLPQHV--ERIKALNVHHVTITINALDPEVGAKVYPWIFHNN--RRIRGKKAA 174 Query: 226 AI---------SRLANAGIILLSQSVLLKGINDD 250 AI L G+++ SV++ G+N+D Sbjct: 175 AILIRNQFKGLEMLVERGVLVKVNSVMIPGMNED 208 >gi|295707098|ref|YP_003600173.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium DSM 319] gi|294804757|gb|ADF41823.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium DSM 319] Length = 338 Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 37/89 (41%), Gaps = 8/89 (8%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 L + C CR+C E+ G+ +LS + E + +V TGG+ Sbjct: 18 LSVTDRCNFRCRYCMPEEIFGADYPFLPAENILSFDELERLTRLFAS-LGVKKVRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS 182 PL+ K L ++ L+ I+ + + + Sbjct: 77 PLL--RKGLPDLINRLKQIEGIDDIAITT 103 >gi|189425003|ref|YP_001952180.1| radical SAM protein [Geobacter lovleyi SZ] gi|189421262|gb|ACD95660.1| Radical SAM domain protein [Geobacter lovleyi SZ] Length = 374 Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 64/160 (40%), Gaps = 28/160 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKS-QIWEVIFTGGDPLI 156 CP C FC + M+ + +V S++ E ++ + EV F GG Sbjct: 9 FIPHAGCPHTCLFCNQ-HMISGAQQSVPSARQISETVQQWLGRSPNRAAEVAFYGG-SFT 66 Query: 157 LSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208 L ++ L + ++ L + ++ +R +R P ++ ++ L Sbjct: 67 LLPRKQQEQLLEAVQPLLEQQKIRNIRISTR-----PDALDEAVLAFLAGHKVTTIEVGV 121 Query: 209 ------IAIHAN--HPYEFSEEAIAAISRLANAGIILLSQ 240 + + +N H + +++AAI R+ +AG + +Q Sbjct: 122 QSLDDLVLLQSNRGHT---AADSMAAIQRVRSAGFQVGAQ 158 >gi|27468181|ref|NP_764818.1| hypothetical protein SE1263 [Staphylococcus epidermidis ATCC 12228] gi|57867026|ref|YP_188720.1| hypothetical protein SERP1144 [Staphylococcus epidermidis RP62A] gi|282875998|ref|ZP_06284865.1| MiaB-like protein [Staphylococcus epidermidis SK135] gi|27315727|gb|AAO04862.1|AE016748_96 conserved hypothetical protein [Staphylococcus epidermidis ATCC 12228] gi|57637684|gb|AAW54472.1| conserved hypothetical protein [Staphylococcus epidermidis RP62A] gi|281295023|gb|EFA87550.1| MiaB-like protein [Staphylococcus epidermidis SK135] gi|329735363|gb|EGG71655.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU045] gi|329737126|gb|EGG73380.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU028] Length = 448 Score = 45.1 bits (106), Expect = 0.014, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L I+ ++ +R S ++ ++ E+I + + K Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|222151807|ref|YP_002560965.1| coproporphyrinogen III oxidase [Macrococcus caseolyticus JCSC5402] gi|222120934|dbj|BAH18269.1| coproporphyrinogen III oxidase [Macrococcus caseolyticus JCSC5402] Length = 489 Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 59/168 (35%), Gaps = 20/168 (11%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--- 129 E D I + L + + + + CP C +C + Sbjct: 139 ELMDRITKTQLNALPDLYELEQEVSIYIGIPFCPTKCAYCTFPAYAIQVHKNDVPEFLVG 198 Query: 130 ---DTEAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLR---YIKHVQILRFHS 182 + E +++ ++ + F GG P +S + L+ +L+ + + HV+ L Sbjct: 199 LLYEIEHIGEWLKAHDIKVTSIYFGGGTPTSISAQDLKLLLEAVYTHFDMTHVRELT--- 255 Query: 183 RVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 V P I+ ++ L + I P F++E + AI R Sbjct: 256 -VEAGRPDTIDEATLEVLNSFDINRISIN-----PQSFTDETLKAIGR 297 >gi|42782634|ref|NP_979881.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 10987] gi|42738560|gb|AAS42489.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 10987] Length = 338 Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C E+ G +LS + E I + ++ TGG+ Sbjct: 18 ISVTDRCNFRCRYCMPEEIFGPDYSFLSNDKILSFDEIERITR-IFVSLGVRKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ L I V+ + Sbjct: 77 PLL--RRGLPQLIERLNKINGVEDI 99 >gi|326942510|gb|AEA18406.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar chinensis CT-43] Length = 337 Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E LA + + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LAKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 129 AIDDDIFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 175 >gi|166031237|ref|ZP_02234066.1| hypothetical protein DORFOR_00924 [Dorea formicigenerans ATCC 27755] gi|166029084|gb|EDR47841.1| hypothetical protein DORFOR_00924 [Dorea formicigenerans ATCC 27755] Length = 428 Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 26/147 (17%), Positives = 57/147 (38%), Gaps = 19/147 (12%) Query: 73 EREDPIGDNNHSPLKGIVH-RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 E D + + ++ + H R +K+ C +C +C + + S++ Sbjct: 121 ELLDINHEKEYEEMQ-VTHTAEHTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRNL 174 Query: 132 EAALAYIQ--EKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 E L ++ S EV+ TG I + + L ++++ + I ++ +R S Sbjct: 175 EHVLEEVRTLAASGYKEVVLTGIHLSSYGIDTGESLLELIQKVHEIDGIKRIRLGS---- 230 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHA 213 ++P+ I E + K + H Sbjct: 231 LEPRIITEEFASSIAALPK---MCPHF 254 >gi|87310113|ref|ZP_01092245.1| probable MiaB protein-putative tRNA-thiotransferase [Blastopirellula marina DSM 3645] gi|87287103|gb|EAQ79005.1| probable MiaB protein-putative tRNA-thiotransferase [Blastopirellula marina DSM 3645] Length = 475 Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 21/141 (14%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 E DP+ D P + +++ C +C +C + G ++G +D Sbjct: 143 HESFDPLRDPEMRPTPF-------QAYVRIQIGCDKFCTYCIVPSVRGPEQGRRP--EDI 193 Query: 132 EAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 A ++ ++ + + G D S L +L + I ++ + + Sbjct: 194 LAETRHLADQGTVEITLVGQTVNSYRGQDAAGKSW-NLADLLAAIHEIDGIRRI----KF 248 Query: 185 PIVDPQRINPELIQCLKEAGK 205 P+ + EL+ ++E K Sbjct: 249 VTNYPKDMTDELLTAVRELDK 269 >gi|24212660|sp|O57854|MOAA_PYRHO RecName: Full=Probable molybdenum cofactor biosynthesis protein A Length = 310 Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 69/177 (38%), Gaps = 38/177 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + L C + C +C R + ++ ++ E + + + I +V TGG+P I Sbjct: 15 ISLTKECNLSCFYCHREGQL--DGERFMTPEEIERIVR-VASRLGIKKVKLTGGEPTIRK 71 Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG----------- 204 + ++++ L+ +V L + + + L + LKEAG Sbjct: 72 D--ILEIIRRLK--PYVVDLSLTTNGTTMYV---------LAEKLKEAGLDRVNISLDTL 118 Query: 205 --KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 K + N +E I I + + V++KG+NDD + ++MR Sbjct: 119 DRKKYKMITGFN----VLDEVIKGIKKATKLFYPVKLNMVVMKGVNDD--EIWDMMR 169 >gi|188586121|ref|YP_001917666.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Natranaerobius thermophilus JW/NM-WN-LF] gi|229890572|sp|B2A3X6|MIAB_NATTJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|179350808|gb|ACB85078.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Natranaerobius thermophilus JW/NM-WN-LF] Length = 451 Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 65/163 (39%), Gaps = 23/163 (14%) Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFCFRREMV 118 PQ E + +R I ++ + + H+ D + + + + C YC++C + Sbjct: 119 FPQLLEHVMQKGKRVKEISQDDSQVFENLPHKREDSIKAWVVISYGCDNYCKYCIVPYVR 178 Query: 119 GSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLR 170 G Q+ + E K + E+ G + + K L + +L+ L Sbjct: 179 GQQRSRDPEHIKYEVEKL-----AKEGLKEITLLGQN-VNSYGKDLDQNISFTNLLEELS 232 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 I+ ++ +RF + P+ + ELI LKE+ K I H Sbjct: 233 KIEGIERIRFMTSH----PKDFDKELITTLKESNK---ICEHF 268 >gi|189346211|ref|YP_001942740.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium limicola DSM 245] gi|189340358|gb|ACD89761.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium limicola DSM 245] Length = 424 Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 75/212 (35%), Gaps = 45/212 (21%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE----KSQIWEVI 148 RI L + C + C +C R+ ++ ++SK AL Y+Q+ I V Sbjct: 20 GRIHLPVAPKCNIQCNYCSRKFDCMNENRPGVTSKVLSPRQALYYLQQAMEISPNIAVVG 79 Query: 149 FTG-GDPLILSHKRLQKV------------------LKTLRYIK--------HVQILRFH 181 G GDP + ++ + L + +I HV + + Sbjct: 80 IAGPGDPFANPDETMETLRLVREHYPEMLLCVATNGLDLMPWIDELAELQVSHV-TITIN 138 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +DP+ + E+ ++ K + + A+ RL G+ S Sbjct: 139 ----AIDPE-VGSEIYAWVRHKKK---MYRDIEAAKLLIGNQLEALKRLKEVGVTAKVNS 190 Query: 242 VLLKGINDD--PEILANLMRTFVEL-RIKPYY 270 +++ GIND ++ + ++ PYY Sbjct: 191 IIIPGINDGHVIDVARKVSELGADILNCLPYY 222 >gi|224418140|ref|ZP_03656146.1| 2-methylthioadenine synthetase [Helicobacter canadensis MIT 98-5491] gi|253827467|ref|ZP_04870352.1| 2-methylthioadenine synthetase [Helicobacter canadensis MIT 98-5491] gi|313141675|ref|ZP_07803868.1| tRNA modifying enzyme [Helicobacter canadensis MIT 98-5491] gi|253510873|gb|EES89532.1| 2-methylthioadenine synthetase [Helicobacter canadensis MIT 98-5491] gi|313130706|gb|EFR48323.1| tRNA modifying enzyme [Helicobacter canadensis MIT 98-5491] Length = 423 Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 14/123 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C + G K + + + E I TG + Sbjct: 133 KSRAFIKIQEGCDFACSYCIIPSVRG--KARSFEKNKIINQITKLTQN-GFSEFILTGTN 189 Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK----EAGKP 206 S++ L +L+++ I V+ LR S ++P +I + + L E Sbjct: 190 MGSWGKDSNENLTSLLESICAIPEVKRLRLGS----LEPSQITQDFLDFLDHPKIERHLH 245 Query: 207 VYI 209 + + Sbjct: 246 IAL 248 >gi|220929547|ref|YP_002506456.1| hypothetical protein Ccel_2132 [Clostridium cellulolyticum H10] gi|219999875|gb|ACL76476.1| protein of unknown function DUF512 [Clostridium cellulolyticum H10] Length = 438 Score = 45.1 bits (106), Expect = 0.015, Method: Composition-based stats. Identities = 42/246 (17%), Positives = 81/246 (32%), Gaps = 83/246 (33%) Query: 41 PVIAN----LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR 96 L+ P+ I E+ + +E E+ + S + G Sbjct: 42 RYYQASEELLLEIEKPDGEIW--------EIEVEKDENEELGLEFEDSLIDG-------- 85 Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 C C FCF ++ + TV Y ++ + F G+ + Sbjct: 86 -----AKSCTNKCIFCFIDQLPKGMRETV-----------YFKDDDS--RLSFLTGNYVT 127 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 L++ ++K + L I H R++ P+ +++H +P Sbjct: 128 LTN--IKK--EELERIIH---------------YRMS------------PINVSVHTTNP 156 Query: 217 --------YEFSEEAIAAISRLANAGIILLSQSVLLKGIND------DPEILANLMRTFV 262 F+ + + I L + GI + Q VL + IND ++L+ L + Sbjct: 157 DLRKFMLGNRFAGDVMNKIRMLTDNGIEVNCQIVLCRDINDGNELDKTIDVLSELYPSIN 216 Query: 263 ELRIKP 268 + I P Sbjct: 217 SVSIVP 222 >gi|257467388|ref|ZP_05631699.1| Fe-S oxidoreductase [Fusobacterium gonidiaformans ATCC 25563] gi|315918518|ref|ZP_07914758.1| Fe-S oxidoreductase [Fusobacterium gonidiaformans ATCC 25563] gi|313692393|gb|EFS29228.1| Fe-S oxidoreductase [Fusobacterium gonidiaformans ATCC 25563] Length = 436 Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 20/139 (14%), Positives = 47/139 (33%), Gaps = 13/139 (9%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152 R +K+ C +C +C G + ++ + L ++ +I + G Sbjct: 145 TRAYVKIQDGCNEFCSYCKIPFARGKSRSRKQEKVLEEIDKLL--MEGFQEIILIGINLG 202 Query: 153 DPL--ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 D + + +++ + ++ +R S V P RI I K + Sbjct: 203 DYGKDLEGDTSFETLVQEILKRDSLKRVRIGS----VYPDRITDSFISLFKNP--KMMPH 256 Query: 211 IHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 LHIS-LQSCDDTVLRNMKR 274 >gi|317063767|ref|ZP_07928252.1| thiamine biosynthesis protein ThiH [Fusobacterium ulcerans ATCC 49185] gi|313689443|gb|EFS26278.1| thiamine biosynthesis protein ThiH [Fusobacterium ulcerans ATCC 49185] Length = 474 Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 15/149 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + L+ ++ + +++ + G DPL S Sbjct: 92 LYVSNYCVNNCEYCGYKHDNDELSRKKLNREELIEEVKSLEKLGHKRIALEAGEDPLNCS 151 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE------------AGKP 206 L +L+ ++ I ++ R V+ E + LKE KP Sbjct: 152 ---LDYILECIKDIYSIKFKNGSIRRINVNIAATTVENYKRLKEAEIGTYILFQETYHKP 208 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI 235 Y +H N P E A+ R AGI Sbjct: 209 TYERVHLNGPKRDYEYHTTAMFRAREAGI 237 >gi|56419300|ref|YP_146618.1| hypothetical protein GK0765 [Geobacillus kaustophilus HTA426] gi|56379142|dbj|BAD75050.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 372 Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 42/180 (23%), Positives = 67/180 (37%), Gaps = 24/180 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ +L C + C C R E + L+ ++ + + I E Q ++FTGGD Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYEMDQPM-LVFTGGD 65 Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208 PL+ L K I + LR S P P + E I+ KE G + Sbjct: 66 PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLSRWAFSL 116 Query: 209 ------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMRTF 261 I H + I AI L I + +V+ + N + +A L+ Sbjct: 117 DGPNAEIHDHFRGVSGSFDLTIRAIHYLHELDIPVQINTVISRY-NVHVLDEMAELVEKL 175 >gi|291301726|ref|YP_003513004.1| MiaB-like tRNA modifying enzyme YliG [Stackebrandtia nassauensis DSM 44728] gi|290570946|gb|ADD43911.1| MiaB-like tRNA modifying enzyme YliG [Stackebrandtia nassauensis DSM 44728] Length = 479 Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 67/210 (31%), Gaps = 41/210 (19%) Query: 47 INPHNPNDPIARQFIP-----QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR----- 96 I H P D R +P ++E ++P D + + + H R Sbjct: 126 IASHTPTD--RRTLLPISPVKRREATAVIPGHAA---PDTDDTAMP--AHLKVMRRRLTS 178 Query: 97 ---ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 LK+ C C FC FR V G +L+ A ++ Sbjct: 179 GPVANLKIASGCDRRCAFCAIPSFRGAFVSRDPGEILAEAQWLAEQGVVEVTLVSENTTS 238 Query: 150 TGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVD-PQRINPELIQCLKEA-GKP 206 G D LS L+K+L L + ++ +R P + P L++ + G Sbjct: 239 YGKD---LSDAAALEKLLPQLAAVDGIERVR-----VSYLQPAELRPSLVETIATTPGVA 290 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGII 236 Y + H + + R+ G Sbjct: 291 PYFDLSFQH------SSRDLLRRMRRFGST 314 >gi|261409709|ref|YP_003245950.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. Y412MC10] gi|261286172|gb|ACX68143.1| molybdenum cofactor biosynthesis protein A [Paenibacillus sp. Y412MC10] Length = 334 Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 71/175 (40%), Gaps = 25/175 (14%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E M ++S ++ + + + + + Sbjct: 10 GRVHDY---IRISVTDRCNLRCVYCMPEEGMEFQPHDQIMSYEEIASIMRVLAPM-GVSK 65 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 V TGG+PL+ L+ ++ + I+ VQ + + + P + LKEAG Sbjct: 66 VRLTGGEPLVRKD--LETLVHQIASIEGVQDISLTTNGI------MLPSKARLLKEAGLT 117 Query: 207 VYIAIHANHPYE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 I I + E + + + I AG+ + VL+KG N+D Sbjct: 118 -RINISLDSLQEERYARITRGGRVHKVLEGIEAAYEAGLNPIKLNMVLMKGFNED 171 >gi|304382742|ref|ZP_07365233.1| possible arylsulfatase regulator [Prevotella marshii DSM 16973] gi|327313870|ref|YP_004329307.1| radical SAM domain-containing protein [Prevotella denticola F0289] gi|304336137|gb|EFM02382.1| possible arylsulfatase regulator [Prevotella marshii DSM 16973] gi|326944612|gb|AEA20497.1| radical SAM domain protein [Prevotella denticola F0289] Length = 451 Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 57/150 (38%), Gaps = 23/150 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156 + C C +CF +++ +S E + +I+ + + T GG+PL+ Sbjct: 107 IAPTSDCNFNCPYCFEE----NKRPIRMSDAVIENIILFIKRYKHLEYLYITWYGGEPLM 162 Query: 157 LSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHAN 214 ++K+L + I +++ + + IN +++ + + I + N Sbjct: 163 AID-IIEKILNRISIEIPNIK---ISHHFLVTNGYLINEKMLSLFSKYPLNSIQITLDGN 218 Query: 215 HPYEFSEEAIAAISRLANAGI-----ILLS 239 P + +L +G+ I+ + Sbjct: 219 KPR------HDNLRKLKKSGLGTFDKIVRN 242 >gi|163816750|ref|ZP_02208113.1| hypothetical protein COPEUT_02940 [Coprococcus eutactus ATCC 27759] gi|158448007|gb|EDP25002.1| hypothetical protein COPEUT_02940 [Coprococcus eutactus ATCC 27759] Length = 450 Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 31/152 (20%), Positives = 60/152 (39%), Gaps = 21/152 (13%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 E D + + + G V R +K+ C +C +C + + S+ Sbjct: 134 EYFIDISKETEYEEMGGHVPVGHTRAYVKIQDGCNQFCSYC-----IIPYVRGRIRSRSE 188 Query: 132 EAALAYIQEKSQ--IWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 EA +A + E ++ I EV+ TG D + L ++ + IK ++ +R S Sbjct: 189 EAVIAEVTELAESGIKEVVLTGIHISSYGKD--KNNEGALIDLIDAISKIKGIKRIRLGS 246 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 ++P I + ++ + A K V H + Sbjct: 247 ----LEPGIITEDFVRRVS-ANKKVCPHFHLS 273 >gi|311029133|ref|ZP_07707223.1| putative Fe-S oxidoreductase, radical SAM superfamily protein [Bacillus sp. m3-13] Length = 374 Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L E + ++E ++ + TGG+P + Sbjct: 33 VEFTTTTLCNMRCEHCAVGYTLQPKDPKALP---IELLIQRLEEIPRLRSISITGGEP-M 88 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 +S K + + + L H + +R +IN L L K P +H + Sbjct: 89 MSMKSVNEYVVPLLKYAHERGVR----------TQINSNLTLDLARYEKIIPYLDVLHIS 138 Query: 215 H 215 H Sbjct: 139 H 139 >gi|229132987|ref|ZP_04261829.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-ST196] gi|228650484|gb|EEL06477.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-ST196] Length = 337 Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LPKLIARLTKLEGLKDIGLTTNGIHLAKQ------ARALKEAGLKRVNISLD 128 Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H N ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEDHVFRKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175 >gi|14590060|ref|NP_142124.1| molybdenum cofactor biosynthesis protein A [Pyrococcus horikoshii OT3] gi|3256500|dbj|BAA29183.1| 316aa long hypothetical molybdenum cofactor biosynthesis protein [Pyrococcus horikoshii OT3] Length = 316 Score = 45.1 bits (106), Expect = 0.016, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 69/177 (38%), Gaps = 38/177 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + L C + C +C R + ++ ++ E + + + I +V TGG+P I Sbjct: 21 ISLTKECNLSCFYCHREGQL--DGERFMTPEEIERIVR-VASRLGIKKVKLTGGEPTIRK 77 Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG----------- 204 + ++++ L+ +V L + + + L + LKEAG Sbjct: 78 D--ILEIIRRLK--PYVVDLSLTTNGTTMYV---------LAEKLKEAGLDRVNISLDTL 124 Query: 205 --KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 K + N +E I I + + V++KG+NDD + ++MR Sbjct: 125 DRKKYKMITGFN----VLDEVIKGIKKATKLFYPVKLNMVVMKGVNDD--EIWDMMR 175 >gi|257440231|ref|ZP_05615986.1| RNA modification enzyme, MiaB family [Faecalibacterium prausnitzii A2-165] gi|257197265|gb|EEU95549.1| RNA modification enzyme, MiaB family [Faecalibacterium prausnitzii A2-165] Length = 441 Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 LK+ C C +C R + ++ A + E+I Sbjct: 146 AYLKIAEGCNNRCHYCAIPGIRGPLHSRDLADCVAEARWLAG-------EGVKELIVVAQ 198 Query: 153 DPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 DP + ++L L + ++ +R P+RI + I +K K V Sbjct: 199 DPTAYGEDWGKPGSICELLDKLNKVPGLEWIRI----MYAYPERITDDFIAAMKRNEKVV 254 Query: 208 -YIAIHANHP----------YEFSEEAIAAISRLANA--GIILLSQSVLLKG 246 Y+ + H E + I +L GI L + L+ G Sbjct: 255 PYLDLPIQHCNDTILKNMNRRSTRAELLEVIGKLRREIPGITLR--TTLIAG 304 >gi|328948729|ref|YP_004366066.1| RNA modification enzyme, MiaB family [Treponema succinifaciens DSM 2489] gi|328449053|gb|AEB14769.1| RNA modification enzyme, MiaB family [Treponema succinifaciens DSM 2489] Length = 482 Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 43/128 (33%), Gaps = 14/128 (10%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 R LK+ C C FC R ++ K E A E E++ TG Sbjct: 175 KHSRATLKIQDGCNNSCSFC-RIHFARGTSVSLEPEKILERAKE--IENLGSSEIVLTGV 231 Query: 153 D----PLILSHKRL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + + + + +L L + + ++F R+ PQ I EL L + Sbjct: 232 NLSQYAGMSKDGAIFDFKDLLSFLLS--NTKKVKF--RISSFYPQHITKELCAVLSDKRV 287 Query: 206 PVYIAIHA 213 + + Sbjct: 288 QPFFHLSI 295 >gi|296129601|ref|YP_003636851.1| molybdenum cofactor biosynthesis protein A [Cellulomonas flavigena DSM 20109] gi|296021416|gb|ADG74652.1| molybdenum cofactor biosynthesis protein A [Cellulomonas flavigena DSM 20109] Length = 349 Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 45/187 (24%), Positives = 76/187 (40%), Gaps = 32/187 (17%) Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 G+V RY + L C + C +C E + + TVL+ + + E Sbjct: 16 GLVDRYGRVATDLRVSLTDRCNLRCTYCMPAEGLPWAPDDTVLTDAEVVRLVRIGVEHLG 75 Query: 144 IWEVIFTGGDPLILSHKRLQKVLK---TLRYIK--HVQILRFHSRVPIVDPQRINPELIQ 198 I EV FTGG+PL+ + L+ ++ LR HV+ + + + Sbjct: 76 IREVRFTGGEPLL--RRGLESIVAGTHALRTADGAHVRT------SLTTN-GLGLDKRAR 126 Query: 199 CLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLAN--AG---------IILLSQSVLLKG 246 L EAG V +++ + P F+ RLA+ AG + +VL++G Sbjct: 127 SLAEAGLDRVNVSLDSLDPVRFATITRR--DRLADVLAGLAAASATGLAPVKVNAVLVRG 184 Query: 247 INDDPEI 253 +NDD + Sbjct: 185 VNDDEAV 191 >gi|227874225|ref|ZP_03992425.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme [Oribacterium sinus F0268] gi|227839933|gb|EEJ50363.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme [Oribacterium sinus F0268] Length = 328 Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 31/174 (17%), Positives = 62/174 (35%), Gaps = 22/174 (12%) Query: 99 LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C ++C++C E + + + A A + I TGG+PL+ Sbjct: 14 MSITDRCNLHCQYCMPNGLENPLPMDRLLTYEELLQVAKAAVAC--GITRFKVTGGEPLV 71 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIHA 213 + +L+ + V+ + + + E + +E G V + Sbjct: 72 RKGAV--DFMASLKALPGVEQVTITTNGL------LLSEALPRFQEMGLDGINVSLDTLI 123 Query: 214 -NHPYEFSE--EAIAAISRLANA---GIILLSQSVLLKGIN-DDPEILANLMRT 260 YE + + + A GI + +VL KG+N D+ L L + Sbjct: 124 PERFYEITGFDALDKVLQGIKEAVVSGIPVKLNTVLQKGVNEDEIFALLALCKK 177 >gi|154248939|ref|YP_001409764.1| biotin synthase [Fervidobacterium nodosum Rt17-B1] gi|154152875|gb|ABS60107.1| Radical SAM domain protein [Fervidobacterium nodosum Rt17-B1] Length = 349 Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 15/115 (13%), Positives = 40/115 (34%), Gaps = 6/115 (5%) Query: 74 REDPIGDNNHSPLKGIVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128 D + + +Y R +++ + C +C +C R + ++ Sbjct: 20 STDEHNEEIFKVADEVRRKYVGTEVHLRAIIEFSNYCSQHCLYCGLRAENRNLNRYRMTE 79 Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 ++ I + V+ +G DP + +R+ ++ ++ + L R Sbjct: 80 EEILERARLIAKLGIKTIVLQSGEDPYY-TTERISYLITEIKKLDVAITLSIGER 133 >gi|282849041|ref|ZP_06258430.1| radical SAM domain protein [Veillonella parvula ATCC 17745] gi|282581316|gb|EFB86710.1| radical SAM domain protein [Veillonella parvula ATCC 17745] Length = 399 Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 63/167 (37%), Gaps = 30/167 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155 CP C FC + + G + L+ + + + Y+ + + WEV F GG Sbjct: 10 FIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWEVAFYGG-SF 68 Query: 156 ILSHKRLQK-VLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210 K LQ +L I + +R +R P + E I L+ G K V + Sbjct: 69 TAITKDLQHKLLMPAYEILQQGLIDGIRCSTR-----PDAVGDEAITLLQSYGVKTVELG 123 Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 + + H + E + A++RL + + + Q LL G Sbjct: 124 VQSMNDGILVDAKRGHTAQ---EVVEAVTRLKHRDMTVGVQ--LLPG 165 >gi|237752883|ref|ZP_04583363.1| 2-methylthioadenine synthetase [Helicobacter winghamensis ATCC BAA-430] gi|229375150|gb|EEO25241.1| 2-methylthioadenine synthetase [Helicobacter winghamensis ATCC BAA-430] Length = 366 Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 53/131 (40%), Gaps = 16/131 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C + G K S + + + + E I TG + Sbjct: 133 KSRAFIKIQEGCDFACSYCIIPSVRG--KARSFSQEKILKQVESLAQ-KGFSEFIITGTN 189 Query: 154 PLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--EAGKP 206 + S + + ++++L I ++ LR S ++P +I+ + L+ + + Sbjct: 190 --MGSWGKDFGLNIATLVESLCEIPLLKRLRIGS----LEPSQIDTHFLSVLENPKIERH 243 Query: 207 VYIAIHANHPY 217 ++IA+ P Sbjct: 244 LHIALQHTSPK 254 >gi|255036824|ref|YP_003087445.1| molybdenum cofactor biosynthesis protein A [Dyadobacter fermentans DSM 18053] gi|254949580|gb|ACT94280.1| molybdenum cofactor biosynthesis protein A [Dyadobacter fermentans DSM 18053] Length = 330 Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 62/178 (34%), Gaps = 39/178 (21%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA--LAYIQE---KSQIWE 146 R + + L C + C +C + + SK A +AY+ + + + Sbjct: 11 RKHTYLRISLTDKCNLRCTYCM-----PQEDMQFMPSKWLMQADEIAYLAGLFVEMGVEK 65 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 + TGG+PL+ +++ TL + S + I + I LK AG Sbjct: 66 IRLTGGEPLVRKDA--GEIIATLGKLP-------ASLTLTTNAVHI-DQFIAELKSAG-- 113 Query: 207 VYIAIHANHP---------YEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 N E + + + I L G ++ V+++G NDD Sbjct: 114 ---VTSLNVSLDTLKEARFREITKRDHFSKTLDHIRLLLAEGFVVKLNMVVMRGTNDD 168 >gi|210610065|ref|ZP_03288244.1| hypothetical protein CLONEX_00430 [Clostridium nexile DSM 1787] gi|210152676|gb|EEA83682.1| hypothetical protein CLONEX_00430 [Clostridium nexile DSM 1787] Length = 430 Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 22/141 (15%), Positives = 49/141 (34%), Gaps = 30/141 (21%) Query: 90 VHRY----------PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 H Y R +K+ C +C +C + + +D + + Sbjct: 129 THEYEEMHLNKTAEHTRAYIKVQDGCNQFCTYCIIP--FARGRVRSRAKEDVVREVTELA 186 Query: 140 EKSQIWEVIFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 EV+ TG D L ++ L ++ + I+ ++ +R S ++P+ I Sbjct: 187 AN-GYQEVVLTGIHLSSYGVD---LENENLLSLILAVNEIEGIKRIRLGS----LEPRII 238 Query: 193 NPELIQCLKEAGKPVYIAIHA 213 + ++ + K + H Sbjct: 239 TEDFVKTISGLEK---MCPHF 256 >gi|227542935|ref|ZP_03972984.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC 51866] gi|227181157|gb|EEI62129.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC 51866] Length = 413 Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 75/204 (36%), Gaps = 37/204 (18%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTG 151 P ++ ++ C + C+ C R + L+ ++ + L + + + V+FTG Sbjct: 17 KPFIVIWEVTRACALVCKHC-RADAQHEPHPDQLTMEEGKRLLDQLASYEKPYPLVVFTG 75 Query: 152 GDPLILSH-KRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-GKPVY 208 GDP S L + L I S P V P ++ PE + L+EA GK + Sbjct: 76 GDPFERSDLAELCQYGTDLGLSI---------SLSPSVTP-KVTPERLHELREAGGKAMS 125 Query: 209 IAIHANHPYEFSEEAIAAIS--------------RLANAGIILLSQSVLLKGINDDPEIL 254 +++ + E A + G L S L KG + Sbjct: 126 MSL-----DGATPETHDAFRGFSGTFDATLEKAPLINAEGYRLQINSTLTKG---NIHEA 177 Query: 255 ANLMRTFVELRIKPYYLHHPDLAA 278 L++ +E++ K +Y+ Sbjct: 178 PALLKRVIEMQAKMWYVFFLVPTG 201 >gi|15613914|ref|NP_242217.1| hypothetical protein BH1351 [Bacillus halodurans C-125] gi|10173967|dbj|BAB05070.1| BH1351 [Bacillus halodurans C-125] Length = 448 Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 50/127 (39%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + + + A +Q E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKEVIKQAEQLVQA--GYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L L ++L+ L + ++ +R S ++ ++ E+I+ + + K Sbjct: 199 TGGYGED---LKDYSLARLLEDLEQVNGLKRIRISS----IEASQLTDEVIEVIDRSTK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|150016017|ref|YP_001308271.1| hypothetical protein Cbei_1133 [Clostridium beijerinckii NCIMB 8052] gi|149902482|gb|ABR33315.1| protein of unknown function DUF512 [Clostridium beijerinckii NCIMB 8052] Length = 444 Score = 45.1 bits (106), Expect = 0.017, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 66/171 (38%), Gaps = 42/171 (24%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C C FCF ++ + T+ D ++ L+++Q V T + + + Sbjct: 86 SCSNKCIFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FVTLT-----NMKDEDID 135 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223 +++K +I + + H+ +P+ +Q L F+ Sbjct: 136 RIIK--YHISPIN-ISVHT----TNPEL----RVQMLN---------------NRFAGNV 169 Query: 224 IAAISRLANAGIILLSQSVLLKGIND------DPEILANLMRTFVELRIKP 268 + + RLA+AGI + +Q V + GIN+ E L L ++ + P Sbjct: 170 LERMQRLADAGITMNAQIVCVPGINNGNELKRTIEDLYKLYPEVSDVAVVP 220 >gi|257469523|ref|ZP_05633615.1| thiamine biosynthesis protein ThiH [Fusobacterium ulcerans ATCC 49185] Length = 469 Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 53/149 (35%), Gaps = 15/149 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + L+ ++ + +++ + G DPL S Sbjct: 87 LYVSNYCVNNCEYCGYKHDNDELSRKKLNREELIEEVKSLEKLGHKRIALEAGEDPLNCS 146 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE------------AGKP 206 L +L+ ++ I ++ R V+ E + LKE KP Sbjct: 147 ---LDYILECIKDIYSIKFKNGSIRRINVNIAATTVENYKRLKEAEIGTYILFQETYHKP 203 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI 235 Y +H N P E A+ R AGI Sbjct: 204 TYERVHLNGPKRDYEYHTTAMFRAREAGI 232 >gi|39995358|ref|NP_951309.1| BchE/P-methylase family protein [Geobacter sulfurreducens PCA] gi|39982120|gb|AAR33582.1| BchE/P-methylase family protein [Geobacter sulfurreducens PCA] Length = 428 Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 35/193 (18%) Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 P+ R +P +E+ P R + + RY ++ CP C FC Sbjct: 132 PVYRAPVPT-DEILSAPWPRREILA----------GRRYLTTQTVQASRGCPYDCSFCT- 179 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 V G +D + LA I+ +++ D L+ + + +L+ L + Sbjct: 180 ---VTPYFGRTFRYRDPDDILAEIRSFR--RKLVVFLDDNLLGDPAKARPILRGLAEM-- 232 Query: 175 VQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIA-------IHANHPYEFSEEA-I 224 +R+ S+ + R +PEL++ + ++G HAN + + Sbjct: 233 --NVRWGSQTNL----RFAEDPELLKLVADSGCIGLFVGIESVTGAHANMAKSGTRYSQA 286 Query: 225 AAISRLANAGIIL 237 + R+ +AGIIL Sbjct: 287 DLMKRVRDAGIIL 299 >gi|38233743|ref|NP_939510.1| putative coenzyme PQQ synthesis related protein [Corynebacterium diphtheriae NCTC 13129] gi|38200004|emb|CAE49673.1| Putative coenzyme PQQ synthesis related protein [Corynebacterium diphtheriae] Length = 399 Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 41/230 (17%), Positives = 81/230 (35%), Gaps = 43/230 (18%) Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 +P D ++G ++ P + ++ C + C+ C R + L+++ Sbjct: 1 MPHTSSDVADFKEVRHIRGDINLKPFIAIWEVTRACGLVCQHC-RADAQHEPHPEQLTTE 59 Query: 130 DTEAALAYIQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---- 184 + L+ + + V+ TGGDP L++++ + + + Sbjct: 60 QGKQLLSDLASYERPKPLVVLTGGDPFERQD--LEELVD------------YGTSLGLNV 105 Query: 185 ---PIVDPQRINPELIQCLKEA-GKPVYIA-------IH-----ANHPYEFSEEAIAAIS 228 P V P R+ PE I L E GK + ++ H + F A + Sbjct: 106 SLSPSVTP-RLTPERIHRLYELGGKAMSMSLDGATAETHDAFRGFS--GTFDTTVKRA-A 161 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278 + AG L S L K + L++T + + K +Y+ Sbjct: 162 DILQAGFRLQINSTLTK---SNIREAPALLKTVMGMGAKMWYVFFLVPTG 208 >gi|237727284|ref|ZP_04557765.1| conserved hypothetical protein [Bacteroides sp. D4] gi|229434140|gb|EEO44217.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] Length = 368 Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 22/156 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 P +L C + C CF V + G +L + +Q+ ++ ++ TG Sbjct: 24 PITANFELTPTCTLNCDMCFIHTERNVVERHGGLLPLQQWLDWAEQLQDMGTLF-ILLTG 82 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+P++ +++ LR + + L + I+ E+++ L+ Sbjct: 83 GEPMLYP--HFKELYTRLREMGFILTL-------NTNGTLIDNEMVRILQTHKPRRVNVT 133 Query: 212 HANHPYEFSEEAI----------AAISRLANAGIIL 237 E A+ RL AGI + Sbjct: 134 LYGSSRETYGRLCHNPQGYTLCVEALKRLKKAGIDV 169 >gi|312795515|ref|YP_004028437.1| molybdenum cofactor biosynthesis protein A [Burkholderia rhizoxinica HKI 454] gi|312167290|emb|CBW74293.1| Molybdenum cofactor biosynthesis protein A [Burkholderia rhizoxinica HKI 454] Length = 372 Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 13/121 (10%) Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRRE 116 R+ IP EL+ +P P G + + P R L + + C C +C R Sbjct: 12 RRVIPL-NELSAVPAFSSAP-GAPRGHVIDRLAR--PLRDLRISVTDRCNFRCVYCMPRT 67 Query: 117 MVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 + G +L+ ++ E + + ++ TGG+PL+ K L+++++ L Sbjct: 68 VFGRDYPFLPHSALLTFEEIERVARLFVAQ-GVEKIRLTGGEPLL--RKHLERLIERLAA 124 Query: 172 I 172 + Sbjct: 125 L 125 >gi|283956404|ref|ZP_06373884.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni 1336] gi|283792124|gb|EFC30913.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni 1336] Length = 416 Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 18/132 (13%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + +L + A Y E++ Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184 Query: 150 TGGD--PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L + L K+L+ + I ++ +R S ++P +I+ ++ L E Sbjct: 185 TGTNIGSYGLKNGTSLGKLLRKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLE 240 Query: 207 VYIAIHANHPYE 218 ++ I H E Sbjct: 241 RHLHIALQHTSE 252 >gi|218134604|ref|ZP_03463408.1| hypothetical protein BACPEC_02507 [Bacteroides pectinophilus ATCC 43243] gi|217989989|gb|EEC56000.1| hypothetical protein BACPEC_02507 [Bacteroides pectinophilus ATCC 43243] Length = 354 Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 29/164 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI----FTGGDP 154 + C C+ C+ G + ++ K + +A ++ +I+ + TGGDP Sbjct: 12 WHITDECDQRCKHCYIFSGKGCSELKSMTWKQMQEVVANCEDFCRIYNKLPYFYITGGDP 71 Query: 155 LILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210 ++ +L +LK+ R I + +P ++ E+ LK G Y Sbjct: 72 ILHPDFWKLMVLLKS-RGIPF---------TIMGNPFHLDDEVCTILKACGCEKYQMSLD 121 Query: 211 ----IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 H P F + + L AGI SV++ ++ Sbjct: 122 GMRSTHDWFRKPRSFD-LTLEKVGCLNRAGIK----SVIMSTVS 160 >gi|171320975|ref|ZP_02909966.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria MEX-5] gi|171093770|gb|EDT38910.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria MEX-5] Length = 372 Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 46/245 (18%), Positives = 87/245 (35%), Gaps = 57/245 (23%) Query: 85 PLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE-- 140 PL + P R L L ++ C C +C R+ G + SS+ A L I Sbjct: 31 PLDTLAR--PLRDLRLSVIDQCNFRCGYCMPRDSFGPDYAFMPSSERLSFAQLEKIARAF 88 Query: 141 -KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV--------------------QILR 179 + ++ TGG+PL+ + L+ +++ L + + + LR Sbjct: 89 ISLGVEKIRLTGGEPLL--RRNLEALIERLATLTTIDGKPVEIALTTNGSLLAAKARTLR 146 Query: 180 FH--SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-II 236 SRV + I+ + + + +A PV + A I AG Sbjct: 147 DAGLSRVTVSL-DAIDDVVFRRMSDADVPVARVL-------------AGIEAAQAAGLAP 192 Query: 237 LLSQSVLLKGINDD--PEILANLMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEG 290 + +V+ +G NDD ++ + V +R Y G S + + Sbjct: 193 VKVNAVIERGANDDQILPLVRHFRHGGVAVRFIEY-----MDVGGASAWSGDKVVPATRM 247 Query: 291 QKIVA 295 ++++ Sbjct: 248 RELIE 252 >gi|46907279|ref|YP_013668.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes serotype 4b str. F2365] gi|47092939|ref|ZP_00230720.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes str. 4b H7858] gi|254933405|ref|ZP_05266764.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes HPB2262] gi|67460888|sp|Q721B9|MOAA_LISMF RecName: Full=Molybdenum cofactor biosynthesis protein A gi|46880546|gb|AAT03845.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes serotype 4b str. F2365] gi|47018686|gb|EAL09438.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes str. 4b H7858] gi|293584966|gb|EFF96998.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes HPB2262] gi|328466819|gb|EGF37933.1| molybdenum cofactor biosynthesis protein A [Listeria monocytogenes 1816] gi|332311456|gb|EGJ24551.1| Molybdenum cofactor biosynthesis protein [Listeria monocytogenes str. Scott A] Length = 333 Score = 45.1 bits (106), Expect = 0.018, Method: Composition-based stats. Identities = 39/174 (22%), Positives = 70/174 (40%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 V TGG+PL+ + + ++++ L I ++ + + + + LK+AG Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITTNA------MYLAKKAEALKDAGLT 116 Query: 206 PVYIAIHANHPYEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD 250 V I++ + H F I + G + VL+KG NDD Sbjct: 117 RVNISLDSLHEDRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDD 170 >gi|311694651|gb|ADP97524.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase [marine bacterium HP15] Length = 298 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 56/161 (34%), Gaps = 23/161 (14%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 ++L + + C C FC + + + + V GD + Sbjct: 22 LILPVTNGCSWNKCTFCEMYTQPQKKFRARKPEDVLQDIRNAARSLGGVRRVFLADGDAM 81 Query: 156 ILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIAI 211 +L +RL ++L LR +Q + P + E + LK+AG + Sbjct: 82 VLPTRRLLEILGQLREAFPDLQRV-----SSYCLPRNLAKKTVEELAQLKDAGLEILYVG 136 Query: 212 HANHPYEF--------SEE-AIAAISRLANAG----IILLS 239 + E + E +A+ ++ AG +++L+ Sbjct: 137 MESGDDEILRRVNKGETWESTRSALLKIREAGLTSSVMVLN 177 >gi|306821117|ref|ZP_07454733.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550810|gb|EFM38785.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 475 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 21/135 (15%), Positives = 56/135 (41%), Gaps = 14/135 (10%) Query: 78 IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 + D + + ++G+ V RY + + +++ C +C +C ++ + L + Sbjct: 165 VWDIDGNIVEGLPSVRRYDFKAFVNIMYGCNNFCTYCI-VPFTRGRERSRLPKDILDEVK 223 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKV-----LKTLRYIKHVQILRFHSRVPIVDPQ 190 + ++ + E+ G + + K L+ + + +++ +RF + P+ Sbjct: 224 --LLAQNNVKEITLLGQNVNSYGNNFTDKYSFPMLLEDINKVDNIRRIRFMTSH----PK 277 Query: 191 RINPELIQCLKEAGK 205 I+ ELI+ K Sbjct: 278 DISDELIESFGRLDK 292 >gi|237746858|ref|ZP_04577338.1| radical SAM family protein [Oxalobacter formigenes HOxBLS] gi|229378209|gb|EEO28300.1| radical SAM family protein [Oxalobacter formigenes HOxBLS] Length = 298 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 33/157 (21%), Positives = 65/157 (41%), Gaps = 23/157 (14%) Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGG 152 + ++L++ + C C +C ++ +V +D + + + I V G Sbjct: 20 NSLILQVTNGCSWNKCTYCDMYTQPQ-KRFSVKPEEDVKKEIEWFSRHYDGIQRVFLADG 78 Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIV-DPQRI----NPELIQCLKEAGKP 206 D + LS +RL +L T+R + V +RV P+ + + EL K Sbjct: 79 DVVALSTRRLLNILNTIREYLPEV------TRVASYCSPRNVANKSDEELKTLFDAGLKQ 132 Query: 207 VYI--------AIHANHPYEFSEEAIAAISRLANAGI 235 VY+ + + + E + + A++RL +AGI Sbjct: 133 VYVGAESGDDFVLESINKGETHQSTVEALNRLGDAGI 169 >gi|189348694|ref|YP_001941890.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans ATCC 17616] gi|189338832|dbj|BAG47900.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans ATCC 17616] Length = 374 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 45/195 (23%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154 L ++ C C +C RE+ GS + + A L I + ++ TGG+P Sbjct: 46 LSVIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLERIARAFVSLGVEKIRITGGEP 105 Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192 L+ + L+ +++ L + V + LR +RV + + Sbjct: 106 LL--RRHLETLIERLAALTTVDGRPVELALTTNGALLAAKARTLRDAGLTRVTVSL-DAL 162 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251 + + + + +A PV + A I AG + +V+ +G NDD Sbjct: 163 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGANDD- 208 Query: 252 EILANLMRTFVELRI 266 + L+R F + Sbjct: 209 -QILPLVRHFRHTGV 222 >gi|302554728|ref|ZP_07307070.1| radical SAM domain-containing protein [Streptomyces viridochromogenes DSM 40736] gi|302472346|gb|EFL35439.1| radical SAM domain-containing protein [Streptomyces viridochromogenes DSM 40736] Length = 409 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 70/191 (36%), Gaps = 35/191 (18%) Query: 96 RILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----V 147 +LK+ C + C +C + Q+ V+S I E ++ V Sbjct: 34 TFILKVHSRCDLACDYCYMYTAADQTWRQQPRVMSPAVVTWTARRIAEHVRVHGLRQVAV 93 Query: 148 IFTGGDPLILSHKRLQKVLKTL-RYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204 + GG+PL+ +RL++++ + R + +R + R+ + E Sbjct: 94 VLHGGEPLLAGPRRLRQIVTEIAREVGPEVRVRTSVQTNGV-----RLTDAWLDLFAELD 148 Query: 205 KPVYIAI---------HANHP--YEFSEEAIAAISRLANA-----GIILLSQSVLLKGIN 248 V ++I H HP ++ A+ RLA A LL +V L+ N Sbjct: 149 IRVGVSIDGGRSEHDRHRRHPDGRGSHDQVAQAVQRLAAAPRRRLFAGLLC-TVDLR--N 205 Query: 249 DDPEILANLMR 259 D L+R Sbjct: 206 DPVATYEELLR 216 >gi|228945768|ref|ZP_04108115.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228813989|gb|EEM60263.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 333 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 14 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 72 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 73 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 124 Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + ++ + I AG+ + V+ KG+ND Sbjct: 125 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171 >gi|229091138|ref|ZP_04222361.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock3-42] gi|228692269|gb|EEL46005.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock3-42] Length = 333 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 14 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 72 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 73 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 124 Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + ++ + I AG+ + V+ KG+ND Sbjct: 125 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171 >gi|229184372|ref|ZP_04311579.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BGSC 6E1] gi|228599168|gb|EEK56781.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BGSC 6E1] Length = 333 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 14 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 72 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 73 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 124 Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + ++ + I AG+ + V+ KG+ND Sbjct: 125 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171 >gi|118477567|ref|YP_894718.1| GTP cyclohydrolase subunit MoaA [Bacillus thuringiensis str. Al Hakam] gi|225864114|ref|YP_002749492.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus 03BB102] gi|118416792|gb|ABK85211.1| GTP cyclohydrolase subunit MoaA [Bacillus thuringiensis str. Al Hakam] gi|225790320|gb|ACO30537.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus 03BB102] Length = 337 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128 Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175 >gi|49481735|ref|YP_036288.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar konkukian str. 97-27] gi|301053674|ref|YP_003791885.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis CI] gi|49333291|gb|AAT63937.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar konkukian str. 97-27] gi|300375843|gb|ADK04747.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus biovar anthracis str. CI] Length = 337 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128 Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175 >gi|52143300|ref|YP_083529.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L] gi|51976769|gb|AAU18319.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L] Length = 337 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128 Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175 >gi|30262154|ref|NP_844531.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Ames] gi|47778008|ref|YP_018776.2| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. 'Ames Ancestor'] gi|49184996|ref|YP_028248.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Sterne] gi|167633002|ref|ZP_02391328.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0442] gi|167638349|ref|ZP_02396626.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0193] gi|170686396|ref|ZP_02877617.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0465] gi|170706016|ref|ZP_02896478.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0389] gi|177650979|ref|ZP_02933876.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0174] gi|229602502|ref|YP_002866510.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0248] gi|254684722|ref|ZP_05148582.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. CNEVA-9066] gi|254720932|ref|ZP_05182723.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A1055] gi|254737167|ref|ZP_05194871.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Western North America USA6153] gi|254743647|ref|ZP_05201332.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Kruger B] gi|254751482|ref|ZP_05203519.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Vollum] gi|254758355|ref|ZP_05210382.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Australia 94] gi|30256780|gb|AAP26017.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Ames] gi|47551713|gb|AAT31251.2| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. 'Ames Ancestor'] gi|49178923|gb|AAT54299.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Sterne] gi|167513650|gb|EDR89019.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0193] gi|167531814|gb|EDR94479.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0442] gi|170129018|gb|EDS97883.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0389] gi|170669472|gb|EDT20214.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0465] gi|172083440|gb|EDT68501.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0174] gi|229266910|gb|ACQ48547.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0248] Length = 337 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 34/172 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128 Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175 >gi|70725785|ref|YP_252699.1| hypothetical protein SH0784 [Staphylococcus haemolyticus JCSC1435] gi|82592973|sp|Q4L8D2|MOAA_STAHJ RecName: Full=Molybdenum cofactor biosynthesis protein A gi|68446509|dbj|BAE04093.1| moaA [Staphylococcus haemolyticus JCSC1435] Length = 340 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 33/177 (18%), Positives = 66/177 (37%), Gaps = 44/177 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G K +L+ ++ +A + + + ++ TGG+ Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDDYVFLPKDELLTFEEMVR-IAKVYAELGVKKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ + L +++ L I ++ + + LK+ G+ +Y Sbjct: 77 PLL--RRNLYQLIAELNQIDGIEDIGMTTNGL-------------LLKKHGQKLYDAGLR 121 Query: 209 -IAIHANHPYEFSEEAIAAISRLANAGIILLSQ--------------SVLLKGINDD 250 I + + E AI+ +L Q V+ KGINDD Sbjct: 122 RINVSLDA---IDNEVFQAINNRNIKATTILDQIDYAVSIGFHVKVNVVIQKGINDD 175 >gi|86150946|ref|ZP_01069162.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni 260.94] gi|315124495|ref|YP_004066499.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85842116|gb|EAQ59362.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni 260.94] gi|315018217|gb|ADT66310.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni ICDCCJ07001] Length = 416 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 18/132 (13%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + +L + A Y E++ Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184 Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L + L K+L+ + I ++ +R S ++P +I+ ++ L E Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLE 240 Query: 207 VYIAIHANHPYE 218 ++ I H E Sbjct: 241 RHLHIALQHTSE 252 >gi|238026593|ref|YP_002910824.1| molybdenum cofactor biosynthesis protein A [Burkholderia glumae BGR1] gi|237875787|gb|ACR28120.1| Molybdenum cofactor biosynthesis protein A [Burkholderia glumae BGR1] Length = 370 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 33/197 (16%), Positives = 67/197 (34%), Gaps = 47/197 (23%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F ++ +LS ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRDVFDKDYPFLPHSALLSLEELERVARLFVAH-GVEKIRITGGE 99 Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191 PL+ K L+ +++ L ++ V + LR +RV + Sbjct: 100 PLL--RKNLEFLIERLARMQTVGGHPLDLTLTTNGSLLARKARSLRDAGLTRVTVSL-DA 156 Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDD 250 ++ L + + N S + + I +AG + V+ +G ND Sbjct: 157 LDDALFRRM-------------NDANFASADVLEGIFAAQDAGLAPVKVNMVVKRGTND- 202 Query: 251 PEILANLMRTFVELRIK 267 + + R F I Sbjct: 203 -AEIVPMARRFKGTGIV 218 >gi|182418337|ref|ZP_02949632.1| conserved hypothetical protein [Clostridium butyricum 5521] gi|237666343|ref|ZP_04526328.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377719|gb|EDT75263.1| conserved hypothetical protein [Clostridium butyricum 5521] gi|237657542|gb|EEP55097.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 466 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 46/121 (38%), Gaps = 20/121 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R LK+ C +C +C + SKD E ++ I++ ++ E+I +G Sbjct: 173 KTRAFLKIQDGCNRFCAYCLI-----PYTRGAVCSKDPEKVISEIKKLAEHGFKEIILSG 227 Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 D + L +L+ + + ++ +R S P +I+ +K Sbjct: 228 IHTASYGVD--LEGDVSLMTILEEIEKVDGIERVRIGSIEPCF----FTDSVIEKMKSMK 281 Query: 205 K 205 K Sbjct: 282 K 282 >gi|157415263|ref|YP_001482519.1| MiaB-like tRNA modifying protein [Campylobacter jejuni subsp. jejuni 81116] gi|157386227|gb|ABV52542.1| hypothetical protein C8J_0943 [Campylobacter jejuni subsp. jejuni 81116] gi|307747905|gb|ADN91175.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni M1] gi|315932134|gb|EFV11077.1| RNA modification enzyme, MiaB family protein [Campylobacter jejuni subsp. jejuni 327] Length = 416 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 51/132 (38%), Gaps = 18/132 (13%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + +L + A Y E++ Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184 Query: 150 TGGD--PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L + L K+L+ + I ++ +R S ++P +I+ ++ L E Sbjct: 185 TGTNIGSYGLKNGTSLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLE 240 Query: 207 VYIAIHANHPYE 218 ++ I H E Sbjct: 241 RHLHIALQHTSE 252 >gi|167747072|ref|ZP_02419199.1| hypothetical protein ANACAC_01784 [Anaerostipes caccae DSM 14662] gi|167654032|gb|EDR98161.1| hypothetical protein ANACAC_01784 [Anaerostipes caccae DSM 14662] Length = 439 Score = 44.7 bits (105), Expect = 0.019, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 20/118 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150 R +K+ C +C +C + + S+D E L+ I+ ++ E + T Sbjct: 146 HTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRDMEDVLSEIRGLAQNGCREFVITG 200 Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 G D + K L +L+ + + V +R S ++P I + ++ L+ Sbjct: 201 IHVCSYGTD--LDGDKGLIDLLEEIGKVGGVDRIRLGS----LEPGIITEDFVKRLQS 252 >gi|317471887|ref|ZP_07931222.1| MiaB family RNA modification enzyme [Anaerostipes sp. 3_2_56FAA] gi|316900660|gb|EFV22639.1| MiaB family RNA modification enzyme [Anaerostipes sp. 3_2_56FAA] Length = 439 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 20/118 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150 R +K+ C +C +C + + S+D E L+ I+ ++ E + T Sbjct: 146 HTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRDMEDVLSEIRGLARNGCREFVITG 200 Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 G D + K L +L+ + + V +R S ++P I + ++ L+ Sbjct: 201 IHVCSYGTD--LDGDKGLIDLLEEIGKVGGVDRIRLGS----LEPGIITEDFVKRLQS 252 >gi|313112748|ref|ZP_07798396.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium cf. prausnitzii KLE1255] gi|310624947|gb|EFQ08254.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium cf. prausnitzii KLE1255] Length = 322 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 59/158 (37%), Gaps = 16/158 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + +C + CR+C + +L+ ++ A + I V TGG+PL+ Sbjct: 14 LSVTDLCNLRCRYCMPDGVPKLAHEDILTYEEFLRLAALFAQC-GIDTVRITGGEPLV-- 70 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216 + ++++ L+ I ++ + + ++ +L L V I++ HP Sbjct: 71 RRGVEQLTAGLKAIPGIRRVALTTNGVLLA-----QKLPALLAAGLDSVNISLDTLHPET 125 Query: 217 -YEFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248 + I +GI + V G+N Sbjct: 126 FRRITGKDELAAVQNGIRAALASGIPVKLNCVPQPGVN 163 >gi|311070188|ref|YP_003975111.1| molybdenum cofactor biosynthesis protein A [Bacillus atrophaeus 1942] gi|310870705|gb|ADP34180.1| molybdenum cofactor biosynthesis protein A [Bacillus atrophaeus 1942] Length = 341 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 63/182 (34%), Gaps = 41/182 (22%) Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQ 143 DR L + + C C +C E+ G K +LS ++ E + Sbjct: 11 KRDRPLRDLRISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLAKLFVSRFG 70 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP-------QRIN 193 + ++ TGG+PL+ + +++K L I V+ + S +P+ R+ Sbjct: 71 VEKIRLTGGEPLMRKD--MPELIKKLARIPGVRDIAMTTNGSLLPVYAEKLKNAGLHRVT 128 Query: 194 -------PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 E + + G V + I AG+ + V+ KG Sbjct: 129 VSLDSLEDERFKAINGRGVSVSKVL-------------EGIEAAKQAGLGIKVNMVVQKG 175 Query: 247 IN 248 +N Sbjct: 176 VN 177 >gi|260886564|ref|ZP_05897827.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185] gi|330839603|ref|YP_004414183.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185] gi|260863707|gb|EEX78207.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185] gi|329747367|gb|AEC00724.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185] Length = 330 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 16/106 (15%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 + C +YC+ C+R G + LS+ + + L I + +IF+GG+PL Sbjct: 7 TTNACNMYCKHCYRDA--GCKAEEELSTAEAKKLLDEIAR-AGFKIMIFSGGEPLTRPD- 62 Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204 + ++++ + LR F + + I PE+ + LK AG Sbjct: 63 -ILELVEHATKLG----LRSVFGTNGTL-----ITPEMARDLKAAG 98 >gi|169333944|ref|ZP_02861137.1| hypothetical protein ANASTE_00330 [Anaerofustis stercorihominis DSM 17244] gi|169259509|gb|EDS73475.1| hypothetical protein ANASTE_00330 [Anaerofustis stercorihominis DSM 17244] Length = 408 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 45/126 (35%), Gaps = 15/126 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R +K+ C ++C +C + +L + E L+ I K EV+ TG Sbjct: 120 KSRAFIKVQDGCNMFCTYC-----IIPYARGILKNASVEKVLSQIDALSKKGYREVVITG 174 Query: 152 GDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + ++ L I + +R S ++P+ + ++ L E K Sbjct: 175 IHVASYKADTGENLIDLLELIDKENKIDRIRLGS----LEPKLLTDTFLKRLSEL-KSFC 229 Query: 209 IAIHAN 214 H + Sbjct: 230 PHFHIS 235 >gi|34557848|ref|NP_907663.1| 2-methylthioadenine synthetase [Wolinella succinogenes DSM 1740] gi|34483566|emb|CAE10563.1| conserved hypothetical protein-2-methylthioadenine synthetase [Wolinella succinogenes] Length = 416 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 38/183 (20%), Positives = 67/183 (36%), Gaps = 23/183 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C + G K L + + + + E + TG + Sbjct: 133 KSRAFVKVQEGCDFSCSYCIIPSVRG--KARSLPVDRIVSQVEILAQH-GFGEFVLTGTN 189 Query: 154 PLILSHK---RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE----AGKP 206 + + K+LK L IK V+ LR S ++P +I+ E ++ L+E Sbjct: 190 VGSYGKESGLNVAKLLKALSQIKGVKRLRLGS----LEPSQIDAEFMELLEEPFMARHLH 245 Query: 207 VYI------AIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 + + + N E + A RLA G L + +L + E+ Sbjct: 246 IALQHTSPKMLQIMNRRNEAQGDL-ALFERLAQKGYALGTDF-ILGHPGESEEVWKEAWE 303 Query: 260 TFV 262 FV Sbjct: 304 RFV 306 >gi|146306671|ref|YP_001187136.1| radical SAM domain-containing protein [Pseudomonas mendocina ymp] gi|145574872|gb|ABP84404.1| Radical SAM domain protein [Pseudomonas mendocina ymp] Length = 297 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 39/87 (44%), Gaps = 9/87 (10%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152 ++L + + C C FC EM + + + + + L I+ + + V G Sbjct: 23 LILPVTNGCSWNQCTFC---EMYTAPQKKFRARDEAQ-VLEEIRRAGEQLIVNRVFLADG 78 Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178 D L+L +RL +L+ +R + V+ + Sbjct: 79 DALVLPTRRLLAILQAIREHMPEVRRV 105 >gi|300870181|ref|YP_003785052.1| MiaB-like tRNA modifying enzyme [Brachyspira pilosicoli 95/1000] gi|300687880|gb|ADK30551.1| MiaB-like tRNA modifying enzyme [Brachyspira pilosicoli 95/1000] Length = 415 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 9/123 (7%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C V+C +C + G K + A+ I E++ TG + Sbjct: 126 QSRAYLKIQDGCEVFCSYCIVSRVRGKHKSLEPNK--IYEAIK-IANDYNYKEIVLTGLN 182 Query: 154 --PLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 +++ + +LK + +R R+ V+P + ELI K + Sbjct: 183 LGSYNFNNEIKFADILKNILEHSSKYGIRI--RLSSVEPIYFDDELINLFKNKDV-LCPH 239 Query: 211 IHA 213 H Sbjct: 240 AHI 242 >gi|296502742|ref|YP_003664442.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis BMB171] gi|296323794|gb|ADH06722.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis BMB171] Length = 337 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L ++ L ++ +Q + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LSTLIARLTNLEGLQDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128 Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H N ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEDHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175 >gi|30020258|ref|NP_831889.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 14579] gi|229043907|ref|ZP_04191603.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676] gi|29895808|gb|AAP09090.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 14579] gi|228725438|gb|EEL76699.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676] Length = 337 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKEELLLTFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L ++ L ++ +Q + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LSTLIARLTNLEGLQDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128 Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H N ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEDHVFQKINGRNVSTKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175 >gi|255081048|ref|XP_002504090.1| molybdopterin synthase [Micromonas sp. RCC299] gi|226519357|gb|ACO65348.1| molybdopterin synthase [Micromonas sp. RCC299] Length = 365 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 39/211 (18%), Positives = 75/211 (35%), Gaps = 44/211 (20%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 + RQ +EE R P+ D G H Y + + L C + C +C Sbjct: 25 LRRQ---LREE---AIAGRSGPLEDT-----FGRRHNY---LRISLTEKCNLRCLYCMPE 70 Query: 116 EMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 E + + K +LS+ + + ++ TGG+P + L+++++ LR + Sbjct: 71 EGIDLTAKEELLSTDEVVRVARLFVAN-GVDKIRLTGGEPTVRPD--LEEIIRRLRALPG 127 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN--------------HPYEFS 220 ++ + + + L+ AG H N Sbjct: 128 LRDIAITTNGLT------LHRNLHALQAAGL-----THVNISLDTLVPPKFELLTRRRGH 176 Query: 221 EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 + + +I R G + VL++G+NDD Sbjct: 177 DRVLKSIDRAVELGYDPVKVNVVLMRGVNDD 207 >gi|255282411|ref|ZP_05346966.1| MiaB protein [Bryantella formatexigens DSM 14469] gi|255266995|gb|EET60200.1| MiaB protein [Bryantella formatexigens DSM 14469] Length = 454 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 15/125 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C +C +C G + L+ D A ++ + E EV+ TG Sbjct: 173 HTRAYIKVQDGCNQFCSYCIIPYARGRIRSRELA--DVLAEVSTLAEN-GYQEVVLTGIH 229 Query: 154 PLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 ++ L ++++ + ++ ++ +R S ++P+ I E + L E K Sbjct: 230 LSSYGKEKDDGIGLLQLIEAVHEVEGIRRIRLGS----LEPRIITEEFAERLSELPK--- 282 Query: 209 IAIHA 213 I H Sbjct: 283 ICPHF 287 >gi|325295204|ref|YP_004281718.1| MiaB-like tRNA modifying enzyme [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065652|gb|ADY73659.1| MiaB-like tRNA modifying enzyme [Desulfurobacterium thermolithotrophum DSM 11699] Length = 437 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 17/127 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C ++C +C + + + S+ E L ++E S E++ T Sbjct: 142 KTRAFLKIQQGCELFCSYC-----IIPKARGKMLSEKPEKVLEQVKELINSGYKEIVLTG 196 Query: 151 ---GGDPLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 GG L L L K+++ + I + LR S V+P + ELI+ + + K Sbjct: 197 THLGGYGLDLEESLSLAKLIEKIVKIPGLYRLRISS----VEPIEFSDELIEVVTSSPK- 251 Query: 207 VYIAIHA 213 + +H Sbjct: 252 IAPHLHI 258 >gi|315638251|ref|ZP_07893433.1| 2-methylthioadenine synthetase [Campylobacter upsaliensis JV21] gi|315481787|gb|EFU72409.1| 2-methylthioadenine synthetase [Campylobacter upsaliensis JV21] Length = 413 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + +K+ C C +C V + +V S E IQ E++ TG + Sbjct: 131 HTKAFVKIQEGCDFNCSYCII-PSVRGRSRSVKESDLLEQIKILIQN--GYTEIVLTGTN 187 Query: 154 --PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 L L K+L+ + I ++ +R S ++P +I+ ++ L E ++ Sbjct: 188 IGSYGLKDGTTLGKLLQKMMQISGLKRIRLGS----LEPAQIDESFMEILDEKLLERHLH 243 Query: 211 IHANHPYE 218 I H E Sbjct: 244 IALQHTSE 251 >gi|261419008|ref|YP_003252690.1| radical SAM protein [Geobacillus sp. Y412MC61] gi|319765824|ref|YP_004131325.1| radical SAM protein [Geobacillus sp. Y412MC52] gi|261375465|gb|ACX78208.1| Radical SAM domain protein [Geobacillus sp. Y412MC61] gi|317110690|gb|ADU93182.1| Radical SAM domain protein [Geobacillus sp. Y412MC52] Length = 372 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 41/182 (22%), Positives = 67/182 (36%), Gaps = 28/182 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ +L C + C C R E + L+ ++ + + I E Q ++FTGGD Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKKLIDEIYEMDQPM-LVFTGGD 65 Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208 PL+ L K I + LR S P P + E I+ KE G + Sbjct: 66 PLMRPDVYDLAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEVGLSRWAFSL 116 Query: 209 ------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI---LANLMR 259 I H + I AI L I + +V+ + + + +A L+ Sbjct: 117 DGPNAEIHDHFRGVSGSFDLTIRAIQYLHELDIPVQINTVISRY---NVHVLNEMAALVE 173 Query: 260 TF 261 Sbjct: 174 KL 175 >gi|57242028|ref|ZP_00369968.1| MiaB-like tRNA modifying enzyme [Campylobacter upsaliensis RM3195] gi|57017220|gb|EAL54001.1| MiaB-like tRNA modifying enzyme [Campylobacter upsaliensis RM3195] Length = 413 Score = 44.7 bits (105), Expect = 0.020, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 10/128 (7%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + +K+ C C +C V + +V S E IQ E++ TG + Sbjct: 131 HTKAFVKIQEGCDFNCSYCII-PSVRGRSRSVKESDLLEQIKILIQN--GYTEIVLTGTN 187 Query: 154 --PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 L L K+L+ + I ++ +R S ++P +I+ ++ L E ++ Sbjct: 188 IGSYGLKDGTTLGKLLQKMMQISGLKRIRLGS----LEPAQIDESFMEILDEKLLERHLH 243 Query: 211 IHANHPYE 218 I H E Sbjct: 244 IALQHTSE 251 >gi|212704636|ref|ZP_03312764.1| hypothetical protein DESPIG_02699 [Desulfovibrio piger ATCC 29098] gi|212672035|gb|EEB32518.1| hypothetical protein DESPIG_02699 [Desulfovibrio piger ATCC 29098] Length = 335 Score = 44.7 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 19/162 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L L C + C +C VL ++ + I + +V TGG+P Sbjct: 19 LSLTDRCNLRCLYCHSNARHQCIPHEKVLRYEEMIRLVQ-IVRGMGVGKVRLTGGEPFAR 77 Query: 158 S--HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP--QRINPELIQCLKEA--GKPVY 208 L ++ + + +R + + P QRI + ++ + Sbjct: 78 KGCDDFLLRLRQRFDDLD----IRITTNGTLLEEHIPLLQRIRISAVNLSLDSFDRETFA 133 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + E + A+ + AGI + +V L+GIND Sbjct: 134 RVT----GRDMLPEVLRALDAMLAAGIRVKINAVGLRGINDS 171 >gi|238019507|ref|ZP_04599933.1| hypothetical protein VEIDISOL_01376 [Veillonella dispar ATCC 17748] gi|237864206|gb|EEP65496.1| hypothetical protein VEIDISOL_01376 [Veillonella dispar ATCC 17748] Length = 380 Score = 44.7 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 64/167 (38%), Gaps = 30/167 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155 CP C FC + + G + L+ + + Y+ + + WEV F GG Sbjct: 10 FIPHVGCPYVCTFCNQSRITGQSGISHLTPDYIKKTITDYVGKKRNDKFWEVAFYGG-SF 68 Query: 156 ILSHKRLQK-VLKTLRYI---KHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210 H+ LQ +L+ + + +R +R P + + I L+ G K V + Sbjct: 69 TAIHRDLQHTLLEPAYEMLQQDIIDGIRCSTR-----PDAVGDKAITLLQSYGVKTVELG 123 Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 + + H + E + A++RL G+ + Q LL G Sbjct: 124 VQSMNDGILVDAKRGHTAQ---EVVDAVARLKQRGMTVGVQ--LLPG 165 >gi|128228|sp|P11067|NIFB_AZOVI RecName: Full=FeMo cofactor biosynthesis protein nifB gi|142338|gb|AAA22148.1| nifB [Azotobacter vinelandii] Length = 502 Score = 44.7 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 37/201 (18%), Positives = 66/201 (32%), Gaps = 59/201 (29%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H Y R+ + + C + C +C R+ G + + + A Q Sbjct: 52 AHHYFARMHVAVAPACNIQCHYCNRKYDCANESRPGVVSEVLTPEQAVKKVKAVAAAIPQ 111 Query: 144 IWEVIFTG-GDPLILSHKRLQ------------------------KVLKTLRY--IKHVQ 176 + + G GDPL + L + ++ L I HV Sbjct: 112 MSVLGIAGPGDPLANPKRTLDTFRMLSEQAPDMKLCVSTNGLALPECVEELAKHNIDHV- 170 Query: 177 ILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVYIAIHANHPYE-----FSEEAIAAIS 228 + + VDP+ +I P+L++ HP E+ + Sbjct: 171 TITIN----CVDPEIGAKIYPDLLE-------------QQAHPRRQGRKILIEQQQKGLE 213 Query: 229 RLANAGIILLSQSVLLKGIND 249 L GI++ SV++ G+ND Sbjct: 214 MLVARGILVKVNSVMIPGVND 234 >gi|229155743|ref|ZP_04283849.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 4342] gi|228627729|gb|EEK84450.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 4342] Length = 337 Score = 44.7 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 68/167 (40%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G+ + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGADYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K+++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LPKLIERLAKLEGIKDIGLTTNGIHLAKQ------AKVLKEAGLKRVNISLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ + + AG+ + V+ KG+ND Sbjct: 129 AIEDYVFQKINGRNVSTKPVLKGMEEAKAAGLEVKVNMVVKKGMNDS 175 >gi|295101447|emb|CBK98992.1| SSU ribosomal protein S12P methylthiotransferase [Faecalibacterium prausnitzii L2-6] Length = 441 Score = 44.7 bits (105), Expect = 0.021, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 43/131 (32%), Gaps = 21/131 (16%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 LK+ C C +C R + + ++ A + E+I Sbjct: 146 AYLKIAEGCNNRCHYCAIPGIRGPLRSREMADCVAEARWLAG-------EGVKELIIVAQ 198 Query: 153 DPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 DP + ++L L I ++ +R P+RI + I +K K + Sbjct: 199 DPTAYGEDWGKPGSICELLDKLNKIPGLEWIRI----MYAYPERITDDFIAAMKRNEKVL 254 Query: 208 -YIAIHANHPY 217 Y+ + H Sbjct: 255 PYLDLPIQHCN 265 >gi|313112838|ref|ZP_07798485.1| MiaB-like tRNA modifying enzyme YliG [Faecalibacterium cf. prausnitzii KLE1255] gi|310624908|gb|EFQ08216.1| MiaB-like tRNA modifying enzyme YliG [Faecalibacterium cf. prausnitzii KLE1255] Length = 441 Score = 44.7 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 54/172 (31%), Gaps = 35/172 (20%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 LK+ C C +C R + ++ A + E+I Sbjct: 146 AYLKIAEGCNNRCHYCAIPGIRGPLHSRDMADCVAEARWLAG-------EGVKELIVVAQ 198 Query: 153 DPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 DP + ++L L + ++ +R P+RI E I +K K V Sbjct: 199 DPTAYGEDWGKPGSICELLDKLNKVPGLEWIRI----MYAYPERITDEFIAAMKRNEKVV 254 Query: 208 -YIAIHANHP----------YEFSEEAIAAISRLANA--GIILLSQSVLLKG 246 Y+ + H E + I +L GI L + L+ G Sbjct: 255 PYLDLPIQHCNDTILKNMNRRSNRAELLEVIGKLRREIPGITLR--TTLIAG 304 >gi|164686289|ref|ZP_02210319.1| hypothetical protein CLOBAR_02727 [Clostridium bartlettii DSM 16795] gi|164601891|gb|EDQ95356.1| hypothetical protein CLOBAR_02727 [Clostridium bartlettii DSM 16795] Length = 432 Score = 44.7 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 17/120 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C YC +C + + S+D E+ + ++ + EV+ TG Sbjct: 141 KTRAFMKIQDGCDRYCSYC-----IIPYARGRVRSRDLESIVKEVENLASNGYKEVVLTG 195 Query: 152 GDPLIL------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 S +L V+K + I+ ++ +R S V+P E ++ + K Sbjct: 196 IHVASYGKDIKDSDIKLLDVIKQINDIEGIERIRLSS----VEPILFTDEFVEAVSTMDK 251 >gi|94269536|ref|ZP_01291489.1| Radical SAM:Molybdenum cofactor synthesis-like [delta proteobacterium MLMS-1] gi|93451185|gb|EAT02100.1| Radical SAM:Molybdenum cofactor synthesis-like [delta proteobacterium MLMS-1] Length = 338 Score = 44.7 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 41/224 (18%), Positives = 79/224 (35%), Gaps = 39/224 (17%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L + C + CR+C + + +LS ++ E + + I +V TGG+PL+ Sbjct: 25 VRLAVTDRCNLNCRYCRPKGPCEEPRRELLSYEELERLVRLLVAM-GISKVRLTGGEPLV 83 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + + LR I ++ L + + ++ ++ L+ +G + + + Sbjct: 84 --RHGMIAFMGRLRAIAGLEQLALTTNA-TLLASHLDD--LRQLRLSGLNISLDT-LSAA 137 Query: 217 Y-------EFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRT-------- 260 + I GI L +V+ +GIN D+ LA L Sbjct: 138 RFATITGQDLFGRVFTVIEAALATGIPLKINAVVQEGINTDELLDLARLAEKWPLEVRFI 197 Query: 261 ---------FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 DLA +HF+ + E +IV Sbjct: 198 EPMPFAGRDEFSAG-------QWDLARLRAHFQANLPELTEIVR 234 >gi|18309092|ref|NP_561026.1| thiamine biosynthesis protein ThiH [Clostridium perfringens str. 13] gi|18143767|dbj|BAB79816.1| conserved hypothetical protein [Clostridium perfringens str. 13] Length = 473 Score = 44.7 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + K L+ + + ++ + G DP+ Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150 Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202 L +L ++ I ++ +R R+ + E + LK+ Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261 KP Y +H + P A+ R AGI + V L G+ D E LA LM Sbjct: 204 YHKPTYEKLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262 Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307 + P+ L P + + + E+ +KIVA L+ L P Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312 >gi|258516114|ref|YP_003192336.1| molybdenum cofactor biosynthesis protein A [Desulfotomaculum acetoxidans DSM 771] gi|257779819|gb|ACV63713.1| molybdenum cofactor biosynthesis protein A [Desulfotomaculum acetoxidans DSM 771] Length = 325 Score = 44.7 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 20/163 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C V + + +L+ ++ E + + ++ FTGG+PL+ Sbjct: 14 VSVTDRCNLRCVYCMPAGGVAAARHEDILTLEEIEQVIRA-AADVGVRKIRFTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 K L ++K + I+ + + + + P+ + LK AG K V I++ P Sbjct: 72 -RKGLPGLVKNIANIRAIDDIALTTNGI------LLPDFGEELKAAGLKRVNISLDTLKP 124 Query: 217 ---YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E + E+ I + + +V+++GINDD Sbjct: 125 ERFREITRLGALEDVWKGIRAALRLNLTPVKINTVVMRGINDD 167 >gi|253702046|ref|YP_003023235.1| radical SAM protein [Geobacter sp. M21] gi|251776896|gb|ACT19477.1| Radical SAM domain protein [Geobacter sp. M21] Length = 511 Score = 44.7 bits (105), Expect = 0.022, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 47/126 (37%), Gaps = 25/126 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C +C + + T+LS+K + ++ + I +V +GGDPL Sbjct: 144 LMFSNECETNCSYCQAQRRYLPEN-TLLSAKRWKEIISE-AKSLGIEQVTLSGGDPLYRK 201 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--INPELIQCLKEAG--KPVYIAIHAN 214 + L I + ++ P + I E+ L E G KP+ N Sbjct: 202 --------EALVLIGEL----IAKKMLFQLPTKCCITEEIADRLVEVGMTKPI------N 243 Query: 215 HP-YEF 219 H E Sbjct: 244 HYLREI 249 >gi|289671288|ref|ZP_06492363.1| hypothetical protein XcampmN_23120 [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 33 Score = 44.7 bits (105), Expect = 0.023, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 2/34 (5%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 C V+CR+CFRR +++ + A+ Sbjct: 1 TGSCAVHCRYCFRRHFPYAEE--TAARDGWREAV 32 >gi|302671973|ref|YP_003831933.1| MiaB-like tRNA modifying enzyme [Butyrivibrio proteoclasticus B316] gi|302396446|gb|ADL35351.1| MiaB-like tRNA modifying enzyme [Butyrivibrio proteoclasticus B316] Length = 454 Score = 44.7 bits (105), Expect = 0.023, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 30/132 (22%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R +K+ C +C +C V + S++ L I+ + EV+ TG Sbjct: 159 HTRAYIKIQDGCNQFCSYC-----VIPYARGRVRSREMSEILTEIEGLVQKGCKEVVLTG 213 Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 G+P+ L +++ + I + +R S ++P+ I E + L Sbjct: 214 IHIGSYGLDKGEPM------LVDLVEKIADISGIDRIRLGS----IEPRLITAENTRRLA 263 Query: 202 EAGKPVYIAIHA 213 K + H Sbjct: 264 AIDK---LCPHF 272 >gi|282857132|ref|ZP_06266378.1| conserved hypothetical protein [Pyramidobacter piscolens W5455] gi|282585067|gb|EFB90389.1| conserved hypothetical protein [Pyramidobacter piscolens W5455] Length = 436 Score = 44.7 bits (105), Expect = 0.023, Method: Composition-based stats. Identities = 28/138 (20%), Positives = 53/138 (38%), Gaps = 20/138 (14%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLS 127 R D + + + SP Y R +K+ C C +C R V +L+ Sbjct: 137 GRRWDSL-ELDRSP-------YFGRAFVKVQDGCDHRCTYCIVPVLRGPSVSRPVADILA 188 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 AA + + G D S + +++ L ++ +Q LRF S + Sbjct: 189 EARRCAAAGQFELILTGVHLGLFGRD----SGESFAALVRALDSVEGIQRLRFGS----L 240 Query: 188 DPQRINPELIQCLKEAGK 205 +P I +L++ L ++ + Sbjct: 241 EPFSIGDDLLEALAQSPR 258 >gi|269797947|ref|YP_003311847.1| MiaB-like tRNA modifying enzyme [Veillonella parvula DSM 2008] gi|269094576|gb|ACZ24567.1| MiaB-like tRNA modifying enzyme [Veillonella parvula DSM 2008] Length = 431 Score = 44.7 bits (105), Expect = 0.023, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 17/126 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R +K+ C YC FC + L S+ + + + E++ TG Sbjct: 143 KTRAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVQEAKRLVDHGFHEIVLTG 197 Query: 152 ---GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 G+ + R L V+K L I ++ +RF S ++ ++ EL++ L K Sbjct: 198 IHLGNYGVELPGRPTLADVVKALLEIPNLYRIRFGS----IESVEVSDELVE-LMATNKR 252 Query: 207 VYIAIH 212 V +H Sbjct: 253 VCPHLH 258 >gi|169342221|ref|ZP_02863304.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens C str. JGS1495] gi|169299705|gb|EDS81762.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens C str. JGS1495] Length = 473 Score = 44.7 bits (105), Expect = 0.024, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + K L+ + + ++ + G DP+ Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150 Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202 L +L ++ I ++ +R R+ + E + LK+ Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261 KP Y +H + P A+ R AGI + V L G+ D E LA LM Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262 Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307 + P+ L P + + + E+ +KIVA L+ L P Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312 >gi|110803728|ref|YP_697445.1| thiamine biosynthesis protein ThiH [Clostridium perfringens SM101] gi|110684229|gb|ABG87599.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens SM101] Length = 473 Score = 44.7 bits (105), Expect = 0.024, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + K L+ + + ++ + G DP+ Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150 Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202 L +L ++ I ++ +R R+ + E + LK+ Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVEDYKRLKDAEIGTYILFQET 203 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261 KP Y +H + P A+ R AGI + V L G+ D E LA LM Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262 Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307 + P+ L P + + + E+ +KIVA L+ L P Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312 >gi|294102421|ref|YP_003554279.1| MiaB-like tRNA modifying enzyme [Aminobacterium colombiense DSM 12261] gi|293617401|gb|ADE57555.1| MiaB-like tRNA modifying enzyme [Aminobacterium colombiense DSM 12261] Length = 434 Score = 44.7 bits (105), Expect = 0.024, Method: Composition-based stats. Identities = 30/142 (21%), Positives = 50/142 (35%), Gaps = 11/142 (7%) Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 R D + L R +K+ C +C +C V + + + E Sbjct: 130 RNDILHSEEWDHLFQFQPLLHSRAFVKIQDGCNHFCSYCVI-PFVRGEPVSRPLNSVLEE 188 Query: 134 ALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + S EV+ TG G L ++++ I V+ +RF S ++P Sbjct: 189 VRS--IADSGCTEVVLTGVHLGLYGQFGEVSLGELVRQAGAIPGVERIRFGS----LEPF 242 Query: 191 RINPELIQCLKEAGKPVYIAIH 212 IN EL+ L E +H Sbjct: 243 GINDELLSALAETP-QFCPHLH 263 >gi|167463117|ref|ZP_02328206.1| molybdenum cofactor biosynthesis protein A [Paenibacillus larvae subsp. larvae BRL-230010] Length = 334 Score = 44.7 bits (105), Expect = 0.024, Method: Composition-based stats. Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 25/177 (14%) Query: 89 IVHRY---PDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQI 144 ++ RY D + + + C + C +C E M +L+ + + + + Sbjct: 5 LIDRYGRVHDYLRISVTDRCNLRCVYCMPEEGMEFEPDDHLLTFNEITTVVRVLAR-LGV 63 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 ++ TGG+PL+ K ++ ++ L I ++ + + + P+ + LK AG Sbjct: 64 RKLRLTGGEPLV--RKHIEDLVNRLSSIPGIEDIALTTNGMFLGPK------AEQLKAAG 115 Query: 205 KPVYIAIHANHPYE-----FS--EEAIAAISRL-ANAGI---ILLSQSVLLKGINDD 250 I I + E + + + L A+A + + VL+KGINDD Sbjct: 116 LT-RINISLDSLKEDRFAFITRGGKLKKVLEGLNASAKVGFNPIKLNVVLMKGINDD 171 >gi|253574631|ref|ZP_04851971.1| MiaB-like tRNA modifying enzyme [Paenibacillus sp. oral taxon 786 str. D14] gi|251845677|gb|EES73685.1| MiaB-like tRNA modifying enzyme [Paenibacillus sp. oral taxon 786 str. D14] Length = 447 Score = 44.3 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 19/143 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + S + A + E++ TG Sbjct: 143 HTRAYLKIQEGCNNFCTFCIIPWSRGLSRSRDPQSV-IQQARQLVAA--GYKEIVLTGIH 199 Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 GD L + RL +L L ++ + +R S ++ +I+ ++ LK + K Sbjct: 200 TGGYGD--DLENYRLSDLLWDLDKVEGLGRIRISS----IEASQIDDRMLDVLKNSSK-- 251 Query: 208 YIAIHANHPYEF-SEEAIAAISR 229 + H + P + S E + + R Sbjct: 252 -MCRHFHIPLQAGSNEVLKRMRR 273 >gi|56410451|ref|YP_145825.1| molybdopterin cofactor biosynthesis protein [Geobacillus kaustophilus HTA426] gi|56378348|dbj|BAD74257.1| molybdopterin cofactor biosynthesis protein (moaA/nifB/pqqE family) [Geobacillus kaustophilus HTA426] Length = 341 Score = 44.3 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 L + C C +C E+ G +G +L+ ++ A LA + + ++ TGG+ Sbjct: 22 LSVTDQCNFRCVYCMPAEVFGPNFRFLDEGQLLTVEEM-ALLAECFVELGVEKIRLTGGE 80 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ L +++ L I ++ + Sbjct: 81 PLLRRD--LDALIERLSAIPGLRDI 103 >gi|313902875|ref|ZP_07836271.1| Radical SAM domain protein [Thermaerobacter subterraneus DSM 13965] gi|313466810|gb|EFR62328.1| Radical SAM domain protein [Thermaerobacter subterraneus DSM 13965] Length = 458 Score = 44.3 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 41/215 (19%), Positives = 75/215 (34%), Gaps = 42/215 (19%) Query: 97 ILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + L C + C+FC+ V+ AL+ E + + V F GG+P Sbjct: 111 VNLYTTTRCNLNCKFCYLSADTRQQYGPNVMERTLLAKALSDCAE-AGVMCVNFLGGEPF 169 Query: 156 ILSHKRLQKVLKTLRYIKH------VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + ++ + I+H + I + P + + L G V + Sbjct: 170 L--DQQAIRY-----AIEHYYNRFLISITTNGTIAP-------DDYTLSLLSRPGVDVIV 215 Query: 210 AIHANHPYEFSEEAIAA----------ISRLANAGIILLSQSVLLK-GINDDPEILANLM 258 +IH++ P E + A + RL AG+ Q VL + DD L + Sbjct: 216 SIHSSKP-EVHDFVTQATGAWHRAVHTLKRLTRAGVRTAVQMVLTRFTTKDDVIGLVRMA 274 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 R + ++ G+ +++EE I Sbjct: 275 RELGANG-----FYVNNMFPGSH---MSLEEYVAI 301 >gi|295111872|emb|CBL28622.1| Predicted Fe-S oxidoreductases [Synergistetes bacterium SGP1] Length = 358 Score = 44.3 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 39/116 (33%), Gaps = 17/116 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEA----ALAYIQEKSQIWEVIFTGG 152 + C CR C+ G + + ++ K + L + ++ TGG Sbjct: 9 WHITDECDQRCRHCYI--FSGDPRRKLDSMTWKQLQETFYNCLDFCDVHDRLPYFYLTGG 66 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 DP++ L + H + F + +P + + + LK G Y Sbjct: 67 DPILHPD------FWRLLKLFHKHAIPF---TIMGNPFHLTDRVCRELKSLGCQKY 113 >gi|229196388|ref|ZP_04323136.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293] gi|228587242|gb|EEK45312.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293] Length = 333 Score = 44.3 bits (104), Expect = 0.024, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 66/172 (38%), Gaps = 34/172 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E I ++ TGG+ Sbjct: 14 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GINKIRLTGGE 72 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q LKEAG K V I++ Sbjct: 73 PLLRKD--LPKLIGRLAKLEGLKDIGLTTNGIHLAKQ------ATALKEAGLKRVNISLD 124 Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + ++ + I AG+ + V+ KG+ND Sbjct: 125 AIEDCVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 171 >gi|182625971|ref|ZP_02953735.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens D str. JGS1721] gi|177908778|gb|EDT71285.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens D str. JGS1721] Length = 473 Score = 44.3 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + K L+ + + ++ + G DP+ Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150 Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202 L +L ++ I ++ +R R+ + E + LK+ Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261 KP Y +H + P A+ R AGI + V L G+ D E LA LM Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262 Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307 + P+ L P + + + E+ +KIVA L+ L P Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312 >gi|317128304|ref|YP_004094586.1| RNA modification enzyme, MiaB family [Bacillus cellulosilyticus DSM 2522] gi|315473252|gb|ADU29855.1| RNA modification enzyme, MiaB family [Bacillus cellulosilyticus DSM 2522] Length = 448 Score = 44.3 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 47/127 (37%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + + A + E++ TG Sbjct: 144 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRKP-EEVIKQAEQLVAS--GYKEIVLTGIH 200 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D + L +L L + ++ +R S ++ +I E+IQ + ++ K Sbjct: 201 TGGYGED---MKDYSLANLLLDLEKVDGLKRIRISS----IEASQITDEVIQVIDQSEK- 252 Query: 207 VYIAIHA 213 V +H Sbjct: 253 VVNHLHV 259 >gi|227499809|ref|ZP_03929904.1| 2-methylthioadenine synthetase [Anaerococcus tetradius ATCC 35098] gi|227218113|gb|EEI83381.1| 2-methylthioadenine synthetase [Anaerococcus tetradius ATCC 35098] Length = 431 Score = 44.3 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 18/119 (15%) Query: 95 DRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R +K+ C +YC +C + R + S+ + + A K+ E++ TG Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNIVSRDMESIKEEAIRLA------KNGYKEIVLTG 195 Query: 152 GDPLI----LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L + KRL V++ + ++ +R S ++P+ I + ++ +K K Sbjct: 196 IHVASYGKDLKNGKRLIDVIEEVAKTDGIERIRLSS----MEPRHITKDFLERMKATRK 250 >gi|319957591|ref|YP_004168854.1| GTP cyclohydrolase subunit moaa [Nitratifractor salsuginis DSM 16511] gi|319419995|gb|ADV47105.1| GTP cyclohydrolase subunit MoaA [Nitratifractor salsuginis DSM 16511] Length = 322 Score = 44.3 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 44/255 (17%), Positives = 87/255 (34%), Gaps = 46/255 (18%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C C++C + + +LS +D + I + ++ TGG+PL+ Sbjct: 15 VSVTERCNFRCQYCMPEKPFSWVPQENLLSFEDLFKFIK-IAIDEGVSKIRLTGGEPLLR 73 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 L + +K + K L + + P+ Q L++AG K + I++ Sbjct: 74 QD--LDRFVKMIHDYKPDIDL-----ALTTNGY-LLPDTAQALRDAGLKRINISL----- 120 Query: 217 YEFSEEAIAAIS-------------RLANAGIILLSQSVLLKGINDDPEILANL-MRTFV 262 A I+ + G+ + V LKGIND EIL L Sbjct: 121 DSLKPAVAAQIAQKNVLGKVLEGIDKALEVGLGVKINMVPLKGIND-AEILDILEYARAR 179 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKI 322 +R++ + ++ + G++I+ +KE+ + Sbjct: 180 GIRVR----FIEYMENAHANSEIEGMHGKEILERIKER---YTIRRLGREGA-------- 224 Query: 323 DTHNIKKVGNGSYCI 337 K+ Y Sbjct: 225 SPSYNYKIEENGYIF 239 >gi|82751856|ref|YP_417597.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus RF122] gi|123741049|sp|Q2YYS8|MOAA_STAAB RecName: Full=Molybdenum cofactor biosynthesis protein A gi|82657387|emb|CAI81829.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus RF122] Length = 340 Score = 44.3 bits (104), Expect = 0.025, Method: Composition-based stats. Identities = 28/160 (17%), Positives = 66/160 (41%), Gaps = 10/160 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154 L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP--QRINPELIQCLKEAGKPV--YIA 210 L+ L ++ L I ++ + + ++ Q++ ++ + + + + Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N+ + + I + G+ + V+ KGINDD Sbjct: 136 QSINNCNIKATTILEQIDYATSIGLNVKVNVVIQKGINDD 175 >gi|325284885|ref|YP_004264347.1| molybdenum cofactor biosynthesis protein A [Deinococcus proteolyticus MRP] gi|324316600|gb|ADY27712.1| molybdenum cofactor biosynthesis protein A [Deinococcus proteolyticus MRP] Length = 332 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 67/178 (37%), Gaps = 28/178 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C + C +C E+ G + +LS ++ E + + ++ TGG+ Sbjct: 15 ISVTDRCNLRCTYCMPAEVFGPDYAFLPQSELLSFEEIERVSRVMVG-LGVQKLRLTGGE 73 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL----------RFHSRVPIVDPQRINPELIQCLKEA 203 PL+ + L ++ L I+ VQ L RF + + QR+ L E Sbjct: 74 PLL--RRELPMLVAQLARIEGVQDLAMTTNGLLLPRFAAELKAAGLQRVTVSLDALDAET 131 Query: 204 GKPVYIAIHANHPYEFSEE-AIAAISRLANAGIILLSQSVLLKGINDD--PEILANLM 258 + S E +A I +AG+ + +V+ +G ND E L Sbjct: 132 FGQMNGLG-------VSPEKVLAGIDAALSAGLGVKLNTVVKRGANDAGLAEFWRELR 182 >gi|260591614|ref|ZP_05857072.1| Fe-S oxidoreductase [Prevotella veroralis F0319] gi|260536414|gb|EEX19031.1| Fe-S oxidoreductase [Prevotella veroralis F0319] Length = 454 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 49/123 (39%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C G + ++S + A K E++ TG Sbjct: 161 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASL-VQQAEE--AAKEGGKEIVLTGVN 217 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + +R ++K L ++ ++ R S ++P I+ +LI+ ++ Sbjct: 218 IGDFGETTGERFLDLVKALDKVEGIERFRISS----LEPDLIDDDLIEYCAQSR---AFM 270 Query: 211 IHA 213 H Sbjct: 271 PHF 273 >gi|227488321|ref|ZP_03918637.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC 51867] gi|227091731|gb|EEI27043.1| radical SAM domain protein [Corynebacterium glucuronolyticum ATCC 51867] Length = 413 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 76/204 (37%), Gaps = 37/204 (18%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTG 151 P ++ ++ C + C+ C R + L++++ + L + + + V+FTG Sbjct: 17 KPFIVIWEVTRACALVCKHC-RADAQHEPHPDQLTTEEGKRLLDQLASYEKPYPLVVFTG 75 Query: 152 GDPLILSH-KRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA-GKPVY 208 GDP S L + L I S P V P ++ PE + L+EA GK + Sbjct: 76 GDPFERSDLAELCQYGTDLGLSI---------SLSPSVTP-KVTPERLHELREAGGKAMS 125 Query: 209 IAIHANHPYEFSEEAIAAIS--------------RLANAGIILLSQSVLLKGINDDPEIL 254 +++ + E A + G L S L KG + Sbjct: 126 MSL-----DGATPETHDAFRGFSGTFDATLEKAPLINAEGYRLQINSTLTKG---NIHEA 177 Query: 255 ANLMRTFVELRIKPYYLHHPDLAA 278 L++ +E++ K +Y+ Sbjct: 178 PALLKRVIEMQAKMWYVFFLVPTG 201 >gi|153809478|ref|ZP_01962146.1| hypothetical protein BACCAC_03796 [Bacteroides caccae ATCC 43185] gi|149127859|gb|EDM19082.1| hypothetical protein BACCAC_03796 [Bacteroides caccae ATCC 43185] Length = 167 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 18/111 (16%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C +C C E G L+ + ++ + I+ + V F+GGDPL + L Sbjct: 35 GCSHHCPGCHNPESWNPNAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPLFYPEEFLA 94 Query: 164 KVLKTLRYIKHVQI----------LRFHSRVPIVDPQ-------RINPELI 197 ++K ++ + I +R R+ V P R +L Sbjct: 95 -LVKRVKEETGMNIWCYTGYTYEEIREQPRLNAVLPYINVLVDGRFEQDLF 144 >gi|168205735|ref|ZP_02631740.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens E str. JGS1987] gi|170662764|gb|EDT15447.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens E str. JGS1987] Length = 473 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + K L+ + + ++ + G DP+ Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150 Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202 L +L ++ I ++ +R R+ + E + LK+ Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261 KP Y +H + P A+ R AGI + V L G+ D E LA LM Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262 Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307 + P+ L P + + + E+ +KIVA L+ L P Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312 >gi|169235987|ref|YP_001689187.1| coenzyme PQQ synthesis protein E [Halobacterium salinarum R1] gi|167727053|emb|CAP13838.1| homolog to coenzyme PQQ synthesis protein E [Halobacterium salinarum R1] Length = 365 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 42/255 (16%), Positives = 84/255 (32%), Gaps = 59/255 (23%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 P+G + +P+ P ++ ++ C + C C + LS+ + + L Sbjct: 6 PVG--SMTPVD--TSERPVVLVWEVTQACALACDHCRASARPQR-HPSELSTAEGKQLLT 60 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRIN 193 V+ +GGDPL T+ ++H R+ + P + Sbjct: 61 DAAAFGDGQLVVLSGGDPLARPD--------TVELVEHGTDC--GLRMTVT-PSGTASLT 109 Query: 194 PELIQCLKEAGKPVYIA--------IHANHPYEFSEEA------IAAISRLANAGIIL-L 238 P I+ L +AG + H EF EA + A + G+ L + Sbjct: 110 PTAIEALADAGVAQFAVSIDGATPTTH----DEFRGEAGSFERTLRAARAIRELGVPLQV 165 Query: 239 SQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI----- 293 + +V D E L + EL + + + F + + G+ + Sbjct: 166 NTTVCA----DTVEALPAIRDLVAELGVALWSVF----------FLVPVGRGRALDPVSP 211 Query: 294 --VASLKEKISGLCQ 306 + + G+ + Sbjct: 212 ARAEEVMAWLDGVAR 226 >gi|95928924|ref|ZP_01311669.1| Radical SAM [Desulfuromonas acetoxidans DSM 684] gi|95134825|gb|EAT16479.1| Radical SAM [Desulfuromonas acetoxidans DSM 684] Length = 319 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 64/161 (39%), Gaps = 18/161 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT----EAALAYIQEKSQIWEVIFTGGDP 154 L + C + CR+C ++ +L ++ + A+ + ++ TGG+P Sbjct: 16 LSITDQCNLRCRYCQPHGRAANRTRRLLRDREIMFLAQQAID-----LGVEKIRITGGEP 70 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+ + ++L LR ++ +Q L + ++ R P+L + ++ Sbjct: 71 LV--RSGVIRLLSELRALEGLQHLVLTTNGLLLS--RYAPDLAAAGVKRINVSIDSLRHE 126 Query: 215 HPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDD 250 E + E I AG+ + V++ G+NDD Sbjct: 127 RFREITRGGSLVEWCRGIDAAEKAGLTVKLNVVVMAGVNDD 167 >gi|329924074|ref|ZP_08279337.1| tRNA methylthiotransferase YqeV [Paenibacillus sp. HGF5] gi|328940913|gb|EGG37221.1| tRNA methylthiotransferase YqeV [Paenibacillus sp. HGF5] Length = 447 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 16/126 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + S + A + E++ TG Sbjct: 142 RTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDPKSI-IKQAHQLVGA--GYKEIVLTGIH 198 Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 GD L RL +L L + ++ +R S ++ +I+ +++ L + K + Sbjct: 199 TGGYGD--DLEDYRLSDLLWDLDRVDGLERIRISS----IEASQIDEKMLDVLNRSSK-M 251 Query: 208 YIAIHA 213 +H Sbjct: 252 CRHLHI 257 >gi|261405595|ref|YP_003241836.1| RNA modification enzyme, MiaB family [Paenibacillus sp. Y412MC10] gi|261282058|gb|ACX64029.1| RNA modification enzyme, MiaB family [Paenibacillus sp. Y412MC10] Length = 447 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 16/126 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + S + A + E++ TG Sbjct: 142 RTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDPKSI-IKQAHQLVGA--GYKEIVLTGIH 198 Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 GD L RL +L L + ++ +R S ++ +I+ +++ L + K + Sbjct: 199 TGGYGD--DLEDYRLSDLLWDLDRVDGLERIRISS----IEASQIDEKMLDVLNRSSK-M 251 Query: 208 YIAIHA 213 +H Sbjct: 252 CRHLHI 257 >gi|186475582|ref|YP_001857052.1| molybdenum cofactor biosynthesis protein A [Burkholderia phymatum STM815] gi|184192041|gb|ACC70006.1| molybdenum cofactor biosynthesis protein A [Burkholderia phymatum STM815] Length = 370 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + G +L+ ++ E A + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRAVFGKDYPFLPHSALLTFEEIERLAAIFVAH-GVEKIRLTGGE 99 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K L+ +++ L + Sbjct: 100 PLL--RKNLEFLIERLARM 116 >gi|317125385|ref|YP_004099497.1| radical SAM protein [Intrasporangium calvum DSM 43043] gi|315589473|gb|ADU48770.1| Radical SAM domain protein [Intrasporangium calvum DSM 43043] Length = 400 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 74/186 (39%), Gaps = 29/186 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGG 152 P ++ ++ C + C C R + + L+++ L I + V+ TGG Sbjct: 21 PMIVIWEVTRACALVCLHC-RADAQHRRNPHELTTEQGRTLLDDIAAWGAPYPIVVLTGG 79 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAG-----KP 206 DP L ++++ H + H + P V P R+ PE++ L+ AG Sbjct: 80 DPFERPD--LAELVR------HGSSIGLHMALSPSVTP-RLTPEVLAELRAAGAGALSLS 130 Query: 207 VYIAIHANH------PYEFSEEAIAAISRLANAGIIL-LSQSVLLKGINDDPEILANLMR 259 + A H P F AA + +AG L ++ +V + L +L+R Sbjct: 131 LDGNTAATHDAFRGVPGVFDATLRAA-QDVRDAGFRLQINSTVTQANV----HELPDLLR 185 Query: 260 TFVELR 265 T ++L Sbjct: 186 TVIDLG 191 >gi|313897359|ref|ZP_07830902.1| tRNA methylthiotransferase YqeV [Clostridium sp. HGF2] gi|312957729|gb|EFR39354.1| tRNA methylthiotransferase YqeV [Clostridium sp. HGF2] Length = 441 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 14/130 (10%) Query: 90 VHRY--PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 +HR+ R LK+ C +C +C L + A + E E+ Sbjct: 136 IHRFEHQTRAFLKIQDGCNQFCSYCIIP--FARGAERSLPEDEVLAIARSLSESGH-REI 192 Query: 148 IFTG---GDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 + +G G + L +++K + + I +Q +R S ++ I EL++ +K Sbjct: 193 VLSGIHTGRYGNGINSSLCQLMKRMVKEIPKLQRIRISS----IEMNEITDELLEFIKGE 248 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 249 EK-IARHLHI 257 >gi|291535169|emb|CBL08281.1| MiaB-like tRNA modifying enzyme [Roseburia intestinalis M50/1] Length = 435 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C +C +C + +G V S K E L I+ KS EV+ TG Sbjct: 143 HTRAFIKVQDGCNQFCSYCI----IPFARGRVRSRK-MEDVLNEIKGLAKSGYKEVVLTG 197 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + + + L +++ + I+ ++ +R S ++P+ + + + L E K Sbjct: 198 IHLSSYGVDTGETLLSLIEHVHEIEGIERIRLGS----LEPRIVTEDFAKRLSELTK--- 250 Query: 209 IAIHA 213 I H Sbjct: 251 ICPHF 255 >gi|262068133|ref|ZP_06027745.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium periodonticum ATCC 33693] gi|291378221|gb|EFE85739.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium periodonticum ATCC 33693] Length = 348 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 21/146 (14%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148 ++ + + CP C FC ++++ G + +S D + + Y++ I EV Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKEVA 59 Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G Sbjct: 60 FFGG-TFTGISMELQKQYLEVVKKYIDNADVEGVRISTR-----PECIDDEILTQLKKYG 113 Query: 205 -KPVYIAIHANHPYEFSEEAIAAISR 229 K + + I +E + A R Sbjct: 114 VKTIELGI-----QSLDDEVLKATGR 134 >gi|237740803|ref|ZP_04571284.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. 2_1_31] gi|229422820|gb|EEO37867.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. 2_1_31] Length = 348 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 32/146 (21%), Positives = 64/146 (43%), Gaps = 21/146 (14%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148 ++ + + CP C FC ++++ G + +S D + + Y++ I EV Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKEVA 59 Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G Sbjct: 60 FFGG-TFTGISMELQKQYLEVVKKYIDNADVEGVRISTR-----PECIDDEILTQLKKYG 113 Query: 205 -KPVYIAIHANHPYEFSEEAIAAISR 229 K + + I +E + A R Sbjct: 114 VKTIELGI-----QSLDDEVLKATGR 134 >gi|240145918|ref|ZP_04744519.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis L1-82] gi|257201983|gb|EEV00268.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis L1-82] Length = 435 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 53/125 (42%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C +C +C + +G V S K E L I+ KS EV+ TG Sbjct: 143 HTRAFIKVQDGCNQFCSYCI----IPFARGRVRSRK-MEDVLNEIKGLAKSGYKEVVLTG 197 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + + + L +++ + I+ ++ +R S ++P+ + + + L E K Sbjct: 198 IHLSSYGVDTGETLLSLIEHVHEIEGIERIRLGS----LEPRIVTEDFAKRLSELTK--- 250 Query: 209 IAIHA 213 I H Sbjct: 251 ICPHF 255 >gi|210622341|ref|ZP_03293110.1| hypothetical protein CLOHIR_01058 [Clostridium hiranonis DSM 13275] gi|210154329|gb|EEA85335.1| hypothetical protein CLOHIR_01058 [Clostridium hiranonis DSM 13275] Length = 442 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 36/153 (23%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C C FCF ++ + T+ D ++ L+++Q V T +S + ++ Sbjct: 93 SCRNKCMFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FVTLT-----NMSEQDIE 142 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223 +++ I + + H+ +P+ L++ + F+ Sbjct: 143 DIIR--YRISPIN-ISVHT----TNPE---------LRQR-----MIT-----NRFAGRL 176 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 + + RLA AGI + Q VL G+ND E+ Sbjct: 177 YSIMERLAEAGITMNCQIVLCPGVNDGKELERT 209 >gi|168213395|ref|ZP_02639020.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens CPE str. F4969] gi|170715134|gb|EDT27316.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens CPE str. F4969] Length = 473 Score = 44.3 bits (104), Expect = 0.026, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + K L+ + + ++ + G DP+ Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150 Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202 L +L ++ I ++ +R R+ + E + LK+ Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVEDYKRLKDAEIGTYILFQET 203 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261 KP Y +H + P A+ R AGI + V L G+ D E LA LM Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262 Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307 + P+ L P + + + E+ +KIVA L+ L P Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312 >gi|168211864|ref|ZP_02637489.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens B str. ATCC 3626] gi|170710191|gb|EDT22373.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens B str. ATCC 3626] Length = 473 Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + K L+ + + ++ + G DP+ Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150 Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202 L +L ++ I ++ +R R+ + E + LK+ Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261 KP Y +H + P A+ R AGI + V L G+ D E LA LM Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262 Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307 + P+ L P + + + E+ +KIVA L+ L P Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312 >gi|78355553|ref|YP_387002.1| hypothetical protein Dde_0506 [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|123727796|sp|Q315T9|RIMO_DESDG RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|78217958|gb|ABB37307.1| SSU ribosomal protein S12P methylthiotransferase [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 430 Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 16/162 (9%) Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 +++ PE +G H P ++ P LK+ C C FC + + G Sbjct: 105 RDMDAWPEMIGRALGVAVHVPPVRLLSTGPSYAYLKVSDGCGHNCSFCT---IPSIRGGL 161 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILR 179 V + D A A + E+IF D L+ +L L + ++ LR Sbjct: 162 VSTPADVLEAEAVNLLSRGVKELIFVAQDVAAYGRDMGLRHGLRSLLDRLLPLDGLERLR 221 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVY----IAIHANHPY 217 + P ++ L++ L++AGKP I + HP Sbjct: 222 L----MYLYPAGLDAGLLRYLRDAGKPFVPYFDIPVQHAHPD 259 >gi|297244007|ref|ZP_06927897.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A8796] gi|297178785|gb|EFH38030.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A8796] Length = 340 Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154 L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197 L+ L ++ L I ++ + R V I+ L Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 Q + + + I + G+ + V+ KGINDD Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175 >gi|296275048|ref|ZP_06857555.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus MR1] Length = 340 Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154 L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197 L+ L ++ L I ++ + R V I+ L Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 Q + + + I + G+ + V+ KGINDD Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175 >gi|296331307|ref|ZP_06873779.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305676293|ref|YP_003867965.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis subsp. spizizenii str. W23] gi|296151422|gb|EFG92299.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305414537|gb|ADM39656.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis subsp. spizizenii str. W23] Length = 341 Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 66/173 (38%), Gaps = 39/173 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C E+ G K +LS ++ E + + ++ TGG+ Sbjct: 21 ISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGE 80 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYI 209 PL+ + +++K L I V+ + S +P+ + LKEAG K V I Sbjct: 81 PLMRKD--MPELIKKLARIPGVRDIAMTTNGSLLPVY---------AERLKEAGLKRVTI 129 Query: 210 AIHANHPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGIN 248 ++ +E + I AG+ + V+ KG+N Sbjct: 130 SL-----DSLEDERFKKINGRGVSVSKVLEGIEAAKQAGLGVKINMVVQKGVN 177 >gi|258422713|ref|ZP_05685618.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9635] gi|257847124|gb|EEV71133.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9635] Length = 340 Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154 L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197 L+ L ++ L I ++ + R V I+ L Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 Q + + + I + G+ + V+ KGINDD Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175 >gi|109157586|pdb|2FB2|A Chain A, Structure Of The Moaa Arg17266268ALA TRIPLE MUTANT gi|109157587|pdb|2FB2|B Chain B, Structure Of The Moaa Arg17266268ALA TRIPLE MUTANT Length = 340 Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154 L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197 L+ L ++ L I ++ + R V I+ L Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 Q + + + I + G+ + V+ KGINDD Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175 >gi|49484483|ref|YP_041707.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus MRSA252] gi|257423751|ref|ZP_05600180.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus 55/2053] gi|257426429|ref|ZP_05602831.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus 65-1322] gi|257429068|ref|ZP_05605455.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus 68-397] gi|257431715|ref|ZP_05608078.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus E1410] gi|257434675|ref|ZP_05610726.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus M876] gi|282902170|ref|ZP_06310063.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus C160] gi|282906610|ref|ZP_06314458.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus Btn1260] gi|282909580|ref|ZP_06317391.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911828|ref|ZP_06319624.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus WBG10049] gi|282915116|ref|ZP_06322893.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus M899] gi|282920843|ref|ZP_06328561.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus C427] gi|282925748|ref|ZP_06333396.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus C101] gi|283959046|ref|ZP_06376487.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus A017934/97] gi|293497520|ref|ZP_06665374.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus 58-424] gi|293511095|ref|ZP_06669792.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus M809] gi|293549701|ref|ZP_06672373.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus M1015] gi|295428850|ref|ZP_06821474.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus EMRSA16] gi|81650568|sp|Q6GEG6|MOAA_STAAR RecName: Full=Molybdenum cofactor biosynthesis protein A gi|49242612|emb|CAG41333.1| putative molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus MRSA252] gi|257272769|gb|EEV04871.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus 55/2053] gi|257276060|gb|EEV07511.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus 65-1322] gi|257279549|gb|EEV10136.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus 68-397] gi|257282594|gb|EEV12726.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus E1410] gi|257285271|gb|EEV15387.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus M876] gi|282312577|gb|EFB42981.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus C101] gi|282315258|gb|EFB45642.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus C427] gi|282320837|gb|EFB51171.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus M899] gi|282323524|gb|EFB53840.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus WBG10049] gi|282326559|gb|EFB56861.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus WW2703/97] gi|282329509|gb|EFB59030.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus Btn1260] gi|282596629|gb|EFC01588.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus C160] gi|283788638|gb|EFC27465.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus A017934/97] gi|290918748|gb|EFD95824.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus M1015] gi|291096451|gb|EFE26709.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus 58-424] gi|291466082|gb|EFF08611.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus M809] gi|295127199|gb|EFG56841.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus EMRSA16] gi|312437321|gb|ADQ76392.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus TCH60] gi|315193523|gb|EFU23919.1| putative molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus CGS00] Length = 340 Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154 L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197 L+ L ++ L I ++ + R V I+ L Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 Q + + + I + G+ + V+ KGINDD Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175 >gi|15925258|ref|NP_372792.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus Mu50] gi|156980583|ref|YP_001442842.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus Mu3] gi|255007046|ref|ZP_05145647.2| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus Mu50-omega] gi|24211997|sp|Q931G4|MOAA_STAAM RecName: Full=Molybdenum cofactor biosynthesis protein A gi|166217891|sp|A7X5J1|MOAA_STAA1 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|14248041|dbj|BAB58430.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus Mu50] gi|156722718|dbj|BAF79135.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus Mu3] Length = 340 Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154 L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197 L+ L ++ L I ++ + R V I+ L Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQELYDAGLRRINVSLDAIDDTLF 135 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 Q + + + I + G+ + V+ KGINDD Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175 >gi|15927848|ref|NP_375381.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus N315] gi|21283915|ref|NP_647003.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus MW2] gi|49487049|ref|YP_044270.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus MSSA476] gi|57650853|ref|YP_187068.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus COL] gi|87161067|ref|YP_494854.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|88196183|ref|YP_501000.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus NCTC 8325] gi|148268706|ref|YP_001247649.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus JH9] gi|150394772|ref|YP_001317447.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus JH1] gi|151222380|ref|YP_001333202.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus str. Newman] gi|161510463|ref|YP_001576122.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253314609|ref|ZP_04837822.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|253729935|ref|ZP_04864100.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257794612|ref|ZP_05643591.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9781] gi|258408785|ref|ZP_05681069.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9763] gi|258422383|ref|ZP_05685295.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9719] gi|258439773|ref|ZP_05690519.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9299] gi|258442671|ref|ZP_05691231.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A8115] gi|258446630|ref|ZP_05694785.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A6300] gi|258450252|ref|ZP_05698344.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A6224] gi|258450738|ref|ZP_05698797.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A5948] gi|258455375|ref|ZP_05703335.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A5937] gi|262048529|ref|ZP_06021413.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus D30] gi|262052284|ref|ZP_06024488.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus 930918-3] gi|269203899|ref|YP_003283168.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus ED98] gi|282893707|ref|ZP_06301939.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A8117] gi|282922136|ref|ZP_06329832.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9765] gi|282926815|ref|ZP_06334442.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A10102] gi|283767359|ref|ZP_06340274.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus H19] gi|284025292|ref|ZP_06379690.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus 132] gi|294848805|ref|ZP_06789550.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9754] gi|295404949|ref|ZP_06814762.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A8819] gi|300910930|ref|ZP_07128380.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus TCH70] gi|304379453|ref|ZP_07362188.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|54037811|sp|P65389|MOAA_STAAW RecName: Full=Molybdenum cofactor biosynthesis protein A gi|54041471|sp|P65388|MOAA_STAAN RecName: Full=Molybdenum cofactor biosynthesis protein A gi|66773819|sp|P69848|MOAA_STAA8 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|81648816|sp|Q6G754|MOAA_STAAS RecName: Full=Molybdenum cofactor biosynthesis protein A gi|81693942|sp|Q5HDT9|MOAA_STAAC RecName: Full=Molybdenum cofactor biosynthesis protein A gi|123722359|sp|Q2FEM4|MOAA_STAA3 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|172049050|sp|A6QJA8|MOAA_STAAE RecName: Full=Molybdenum cofactor biosynthesis protein A gi|189028696|sp|A6U3Z2|MOAA_STAA2 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|189028697|sp|A5IV50|MOAA_STAA9 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|189028698|sp|A8Z366|MOAA_STAAT RecName: Full=Molybdenum cofactor biosynthesis protein A gi|52695872|pdb|1TV7|A Chain A, Structure Of The S-Adenosylmethionine Dependent Enzyme Moaa gi|52695873|pdb|1TV7|B Chain B, Structure Of The S-Adenosylmethionine Dependent Enzyme Moaa gi|52695874|pdb|1TV8|A Chain A, Structure Of Moaa In Complex With S-Adenosylmethionine gi|52695875|pdb|1TV8|B Chain B, Structure Of Moaa In Complex With S-Adenosylmethionine gi|109157588|pdb|2FB3|A Chain A, Structure Of Moaa In Complex With 5'-Gtp gi|109157589|pdb|2FB3|B Chain B, Structure Of Moaa In Complex With 5'-Gtp gi|13702068|dbj|BAB43360.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus N315] gi|21205357|dbj|BAB96051.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus MW2] gi|49245492|emb|CAG43969.1| putative molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus MSSA476] gi|57285039|gb|AAW37133.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus COL] gi|87127041|gb|ABD21555.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus USA300_FPR3757] gi|87203741|gb|ABD31551.1| molybdopterin cofactor biosynthesis protein A, putative [Staphylococcus aureus subsp. aureus NCTC 8325] gi|147741775|gb|ABQ50073.1| GTP cyclohydrolase subunit MoaA [Staphylococcus aureus subsp. aureus JH9] gi|149947224|gb|ABR53160.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus JH1] gi|150375180|dbj|BAF68440.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus str. Newman] gi|160369272|gb|ABX30243.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus USA300_TCH1516] gi|253726382|gb|EES95111.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus USA300_TCH959] gi|257788584|gb|EEV26924.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9781] gi|257840468|gb|EEV64928.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9763] gi|257841814|gb|EEV66251.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9719] gi|257847549|gb|EEV71551.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9299] gi|257851792|gb|EEV75726.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A8115] gi|257854698|gb|EEV77646.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A6300] gi|257856344|gb|EEV79253.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A6224] gi|257861521|gb|EEV84323.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A5948] gi|257862586|gb|EEV85354.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A5937] gi|259159803|gb|EEW44843.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus 930918-3] gi|259163387|gb|EEW47945.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus D30] gi|262076189|gb|ACY12162.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus ED98] gi|282591266|gb|EFB96339.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A10102] gi|282593604|gb|EFB98597.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9765] gi|282763765|gb|EFC03893.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A8117] gi|283461238|gb|EFC08322.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus H19] gi|285817930|gb|ADC38417.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus aureus 04-02981] gi|294824184|gb|EFG40608.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A9754] gi|294969894|gb|EFG45912.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus A8819] gi|298695526|gb|ADI98748.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus ED133] gi|300887910|gb|EFK83105.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus TCH70] gi|304341985|gb|EFM07889.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|312830616|emb|CBX35458.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129647|gb|EFT85638.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus CGS03] gi|315198198|gb|EFU28529.1| molybdenum (Mo2+) cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus CGS01] gi|329314952|gb|AEB89365.1| Molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus T0131] gi|329723623|gb|EGG60152.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus 21172] gi|329730314|gb|EGG66704.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus 21193] gi|329732017|gb|EGG68372.1| molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus 21189] Length = 340 Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154 L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197 L+ L ++ L I ++ + R V I+ L Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 Q + + + I + G+ + V+ KGINDD Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175 >gi|325262830|ref|ZP_08129566.1| 2-methylthioadenine synthetase [Clostridium sp. D5] gi|324031924|gb|EGB93203.1| 2-methylthioadenine synthetase [Clostridium sp. D5] Length = 440 Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 28/149 (18%), Positives = 53/149 (35%), Gaps = 21/149 (14%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 E D + PL+ R +K+ C +C +C + + D Sbjct: 131 EMLDINHTKEYEPLRLSKTGEHTRAYIKVQDGCNQFCSYCIIP--FARGRVRSRAKADVL 188 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRYIKHVQILRFHSRV 184 + + E EV+ TG LS + L +++ + ++ ++ +R S Sbjct: 189 EEVRRLAEN-GYQEVVLTGI---HLSSYGIDLEETESLLSLIRAVHEVRGIRRIRLGS-- 242 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHA 213 ++P+ I E +Q L K I H Sbjct: 243 --LEPRIITEEFVQELASLEK---ICPHF 266 >gi|225375407|ref|ZP_03752628.1| hypothetical protein ROSEINA2194_01032 [Roseburia inulinivorans DSM 16841] gi|225212743|gb|EEG95097.1| hypothetical protein ROSEINA2194_01032 [Roseburia inulinivorans DSM 16841] Length = 438 Score = 44.3 bits (104), Expect = 0.027, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 44/123 (35%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R +K+ C +C +C + +S+D + + E E++ TG Sbjct: 146 HTRAFIKVQDGCNQFCSYCIIP--FARGRVRSRNSEDVIREVKRLAEH-GFREIVLTGIH 202 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + + L +++ + + ++ +R S ++P+ + L K I Sbjct: 203 LSSYGVDTGDNLLHLIREVHNVDGIERIRLGS----LEPRIVTDGFAAALAGLPK---IC 255 Query: 211 IHA 213 H Sbjct: 256 PHF 258 >gi|304313911|ref|YP_003849058.1| molybdopterin cofactor biosynthesis protein A [Methanothermobacter marburgensis str. Marburg] gi|313104133|sp|Q50746|MOAA_METTM RecName: Full=Probable molybdenum cofactor biosynthesis protein A gi|302587370|gb|ADL57745.1| predicted molybdopterin cofactor biosynthesis protein A [Methanothermobacter marburgensis str. Marburg] Length = 305 Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 68/173 (39%), Gaps = 31/173 (17%) Query: 91 HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 HR P L + + C V C +C R ++ S + +S +D E + + ++ Sbjct: 7 HRRPLVSLRISVTGRCNVSCIYCHRDGILRSDEE--MSPEDIENICR-VASDLGVKKIRL 63 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 +GG+PLI + ++++ + I + + + + +L L++AG + Sbjct: 64 SGGEPLIRDD--IVEIVEKINSIG-FRDISITTNG------TLLEDLSVPLRDAGLD-RV 113 Query: 210 AIHANHPYEFSEEAIAAISR-----LANAGI---------ILLSQSVLLKGIN 248 + + E I+R AGI + V+L+G+N Sbjct: 114 NVSFDT---LKPETYRFITRKDYLERVKAGIEGAVMAGLDPVKINMVILRGVN 163 >gi|258645469|ref|ZP_05732938.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister invisus DSM 15470] gi|260402822|gb|EEW96369.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dialister invisus DSM 15470] Length = 447 Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 79/233 (33%), Gaps = 77/233 (33%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFT- 150 R +K+ C YC FC + L S+ A+ I+ + EV+ T Sbjct: 152 KTRAFIKIQEGCDNYCTFC-----IIPFARGKLKSRRQSDAVEEIRRLVEKGYREVVLTG 206 Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G D + L ++ L I + +R S ++ ++ ELI+ ++E Sbjct: 207 IHLGNYGKD--LHDGTSLSTLVTELVRIPDLLRIRLGS----IESVELSDELIRIIREEP 260 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 K V +H + G +DD IL + R Sbjct: 261 K-VCPHLHL----------------------------PIQAG-SDD--ILKRMNR----- 283 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGG 316 H+R + E ++++ +L+++I GL I+ PG Sbjct: 284 -----------------HYR--LAEYKELIRNLRKEIPGLALTTDLIVGFPGE 317 >gi|256827193|ref|YP_003151152.1| MiaB-like tRNA modifying enzyme [Cryptobacterium curtum DSM 15641] gi|256583336|gb|ACU94470.1| MiaB-like tRNA modifying enzyme [Cryptobacterium curtum DSM 15641] Length = 409 Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 11/123 (8%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTG 151 +P R+ LK+ C C FC + + + A Y + + EV+ TG Sbjct: 128 FPTRVGLKIQDGCSAACTFCI-VHVARGKAFSRPLPDVLREAHELY---DAGVREVVLTG 183 Query: 152 GD--PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + ++ L KV + L I + LR R+ ++P ELI+ L V Sbjct: 184 INLGTYTSNNANLAKVAQQL--IDEMPKLRV--RISSIEPLHATDELIEVLSRQEGRVCR 239 Query: 210 AIH 212 +H Sbjct: 240 HLH 242 >gi|307295474|ref|ZP_07575310.1| molybdenum cofactor biosynthesis protein A [Sphingobium chlorophenolicum L-1] gi|306878513|gb|EFN09733.1| molybdenum cofactor biosynthesis protein A [Sphingobium chlorophenolicum L-1] Length = 341 Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 63/166 (37%), Gaps = 26/166 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + CR+C M K VL+ ++ + + + TGG+PL+ Sbjct: 29 ISVTDRCDLRCRYCMAERMTFLPKDQVLTLEEIALLADLFIAR-GVRRIRLTGGEPLVRR 87 Query: 159 HKRLQKVLKTLRY-----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212 + ++ + + V + +R+ + Q L +AG + + +++ Sbjct: 88 D--IVDLVHRIGRHVGKGLDEVTLTTNGTRL---------AQHAQALADAGVRRINVSMD 136 Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250 + P F+ + AG+ + V LKGIN+D Sbjct: 137 SRDPDRFAHVTRNGDIRLVFEGLEAAQAAGLAVKINMVALKGINED 182 >gi|78043007|ref|YP_359644.1| tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995122|gb|ABB14021.1| tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein [Carboxydothermus hydrogenoformans Z-2901] Length = 365 Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 40/90 (44%), Gaps = 10/90 (11%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 P I Y L+L +C + CR C+R S KG ++ K E L + Sbjct: 13 EPQPDIQEIY-----LELSGLCNLNCRHCYRN--SWSYKGGLMERKTWEKVLEDAKALPL 65 Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLRYI 172 + ++ G G+PL+ +++++ ++ + Sbjct: 66 LSRIVLGGIGEPLLHP--EIKEIITNIKAM 93 >gi|42783913|ref|NP_981160.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 10987] gi|42739843|gb|AAS43768.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 10987] Length = 334 Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E LA + + ++ TGG+ Sbjct: 15 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LARLFVSIGVRKIRLTGGE 73 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 74 PLLRKD--LTKLIARLMKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 125 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 126 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 172 >gi|297539312|ref|YP_003675081.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylotenera sp. 301] gi|297258659|gb|ADI30504.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylotenera sp. 301] Length = 456 Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 46/124 (37%), Gaps = 18/124 (14%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDP 154 L ++ C YC FC V S+ EA L + ++ + E+ G + Sbjct: 165 AFLSIMEGCSKYCSFC-----VVPYTRGEEVSRPFEAILTEAAQLAEQGVKEITLLGQNV 219 Query: 155 ----LILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + L +++ + I V+ +RF + P QR LI C K + Sbjct: 220 NAYRAQYNDLEADLAMLIEYIAEIPQVERIRFTTSHPNEMSQR----LIDCFANIPK-LA 274 Query: 209 IAIH 212 + +H Sbjct: 275 VQLH 278 >gi|257125843|ref|YP_003163957.1| radical SAM protein [Leptotrichia buccalis C-1013-b] gi|257049782|gb|ACV38966.1| Radical SAM domain protein [Leptotrichia buccalis C-1013-b] Length = 316 Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 69/189 (36%), Gaps = 28/189 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + L C C FC + S+K + ++ + I K+ ++ FT G+PL Sbjct: 9 ISLTEKCNYRCFFCHEEGLDMSKKRISKTKEEVYDLIE-IALKNGYNDLTFTDGEPLT-K 66 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--GKPVYIAIH---- 212 K +Q K L + K + + + ++ EL++C+ + I++H Sbjct: 67 KKDIQWYFKKLDHKKMYPDITI-----VTNGFLMDDELLECVSKYKGNFKFNISLHSLNP 121 Query: 213 ------------ANHPYEFSEEAIAAISRLANAGIILLS---QSVLLKGINDDPEILANL 257 N + + A + L+ VLLKGIN + + + Sbjct: 122 EDYEKIICLAENLNSEKVMDVRFKKVVENIRKAKLRNLNIKLNFVLLKGINTGKDKIREI 181 Query: 258 MRTFVELRI 266 + ++ I Sbjct: 182 LEFALQNNI 190 >gi|20808722|ref|NP_623893.1| Fe-S oxidoreductase [Thermoanaerobacter tengcongensis MB4] gi|20517363|gb|AAM25497.1| predicted Fe-S oxidoreductases [Thermoanaerobacter tengcongensis MB4] Length = 475 Score = 44.3 bits (104), Expect = 0.028, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 49/126 (38%), Gaps = 17/126 (13%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGD 153 +++++ + + C C++C+ + + + + Y + I+ + GG+ Sbjct: 86 EKLVIIVTNNCNCRCKYCYANGGSYGLDVNNMKRDEAKNIIDYFVKNFRVIYNIQIFGGE 145 Query: 154 PLILSH--KRLQKVLKTLRY------IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 P++ K + + + LR + I+ + +P E I +K+ Sbjct: 146 PMLNYDVIKVICEYFENLRNNNIIDYMPQFGIVTNGTYLP--------SEAIDIMKKFRF 197 Query: 206 PVYIAI 211 + I++ Sbjct: 198 NITISL 203 >gi|163783468|ref|ZP_02178459.1| Radical SAM [Hydrogenivirga sp. 128-5-R1-1] gi|159881232|gb|EDP74745.1| Radical SAM [Hydrogenivirga sp. 128-5-R1-1] Length = 362 Score = 44.3 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 22/126 (17%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + + E + D + P G++ ++ L + C +YC+ C+ + L Sbjct: 1 MLRVSEYIRKALSDEPYRPFPGVI------LIWNLTNRCNLYCKHCYSSA--NQETKGEL 52 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPL----------ILSHKRLQKVLKT---LRYIK 173 S + + ++ I +GG+PL IL K ++ L T L Sbjct: 53 SLDEIRKVADDL-VNEKVRFAILSGGEPLLREDIYDVSAILREKGIKTYLSTNGLLINRD 111 Query: 174 HVQILR 179 +V+++R Sbjct: 112 NVKLIR 117 >gi|254252868|ref|ZP_04946186.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia dolosa AUO158] gi|124895477|gb|EAY69357.1| Molybdenum cofactor biosynthesis enzyme [Burkholderia dolosa AUO158] Length = 369 Score = 44.3 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 22/114 (19%) Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFCFRREMVGSQ-- 121 P+ D + P + GI H PD L + + C C +C RE+ Sbjct: 7 PLADVSGMPDVSGIAHV-PDGALTDTFARPLRDLRISVTDRCNFRCVYCMPREVFDKDYP 65 Query: 122 ---KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 +L+ ++ E + ++ TGG+PL+ K L+ +++ L + Sbjct: 66 FLPHSALLAHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116 >gi|88602761|ref|YP_502939.1| radical SAM family protein [Methanospirillum hungatei JF-1] gi|88188223|gb|ABD41220.1| GTP cyclohydrolase subunit MoaA [Methanospirillum hungatei JF-1] Length = 292 Score = 44.3 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 70/181 (38%), Gaps = 32/181 (17%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 + D+ P+ + + + C + C +C R + T LS +D A L Sbjct: 3 LHDSYGRPISNLR--------ISVNSGCNLRCVYCHREGETKPE--TPLSLEDIRAILD- 51 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197 + I V FTGG+PL+ +++ +R + + + L Sbjct: 52 VAGNIGIRTVKFTGGEPLLRED-----IVEIIRSVPP------GIESSMTTNGTLLGSLA 100 Query: 198 QCLKEAGK-PVYIAIHANHP---YEFSE-----EAIAAISRLANAGI-ILLSQSVLLKGI 247 L++AG V I++ + +P + + + I +AG+ + VLLKGI Sbjct: 101 HDLRDAGLARVNISLDSLNPETYKSITGTGLLSDVLEGIEAARDAGLTPIKINMVLLKGI 160 Query: 248 N 248 N Sbjct: 161 N 161 >gi|229093829|ref|ZP_04224927.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock3-42] gi|228689562|gb|EEL43371.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock3-42] Length = 339 Score = 44.3 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177 >gi|310827022|ref|YP_003959379.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum KIST612] gi|308738756|gb|ADO36416.1| molybdenum cofactor biosynthesis protein A [Eubacterium limosum KIST612] Length = 318 Score = 44.3 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 30/175 (17%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R + + + + +C + C +C E + + T LS ++ EA + I ++ T Sbjct: 7 RKVNYLRISITDLCNLRCVYCMPEEGVPKRRHATNLSFEEIEALVRA-GADMGIDKIRLT 65 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYI 209 GG+PL+ L ++K L I ++ + + PE+ LK AG + V I Sbjct: 66 GGEPLV-RAGVLD-LVKKLGAIPGIRDFAMTTNGI------LLPEMAADLKAAGLRRVNI 117 Query: 210 AIHANHPYEFSEEAIAAISRLAN-----AGI---------ILLSQSVLLKGINDD 250 ++ F E A I+R AGI L +VL+KG NDD Sbjct: 118 SL-----DTFDPEKYARITRCGRLEDALAGIDAAVAAGLTPLKINTVLIKGFNDD 167 >gi|304439005|ref|ZP_07398925.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304372494|gb|EFM26080.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 288 Score = 44.3 bits (104), Expect = 0.029, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 27/158 (17%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEKSQIWEVIFTG 151 ++++ C C FC K +D E Y++E+ V Sbjct: 17 LIVQATVGCSYNKCDFC------SMYKDDTFHLRDLEELKVEVKEYLEERPFYKRVFIAD 70 Query: 152 GDPLILSHKRLQKVLKTLRY-IKHVQILR-FHS-RVPIVDPQRINPELIQCLKEAGKPVY 208 GD L LS+ +L + +++++ + + + + + R E ++ L+E G + Sbjct: 71 GDALCLSNDKLVDLCDFFAKNMENLERITSYATAKDIL----RKTDEELRELREHGIEMV 126 Query: 209 IAIHANHPYEFSEEAIA---------AISRLANAGIIL 237 + + E ++ A + AGI + Sbjct: 127 YVGYESGSDEILKDVNKNSTAEEYILATKKAKAAGIKV 164 >gi|281417744|ref|ZP_06248764.1| protein of unknown function DUF512 [Clostridium thermocellum JW20] gi|281409146|gb|EFB39404.1| protein of unknown function DUF512 [Clostridium thermocellum JW20] Length = 440 Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 60/182 (32%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C C FCF ++ + T+ Y ++ + F G+ + L++ Sbjct: 87 TKSCRNKCIFCFIDQLPKGMRETL-----------YFKDDDS--RLSFFMGNYVTLTNMS 133 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-- 219 ++ + +K P+ +++H ++P E Sbjct: 134 -------------------------------YDDIDRIIKYKMSPINVSVHTSNP-ELRV 161 Query: 220 -------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRI 266 + + + I RL GI + +Q VL++G+ND E+ L+ L + + Sbjct: 162 YMLRNKTAGDVMDKIKRLIEGGIKVNAQIVLVRGVNDGKELDRTLKDLSALYPGLNSISV 221 Query: 267 KP 268 P Sbjct: 222 VP 223 >gi|256003358|ref|ZP_05428349.1| protein of unknown function DUF512 [Clostridium thermocellum DSM 2360] gi|255992648|gb|EEU02739.1| protein of unknown function DUF512 [Clostridium thermocellum DSM 2360] gi|316940219|gb|ADU74253.1| protein of unknown function DUF512 [Clostridium thermocellum DSM 1313] Length = 440 Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 60/182 (32%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C C FCF ++ + T+ Y ++ + F G+ + L++ Sbjct: 87 TKSCRNKCIFCFIDQLPKGMRETL-----------YFKDDDS--RLSFFMGNYVTLTNMS 133 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-- 219 ++ + +K P+ +++H ++P E Sbjct: 134 -------------------------------YDDIDRIIKYKMSPINVSVHTSNP-ELRV 161 Query: 220 -------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRI 266 + + + I RL GI + +Q VL++G+ND E+ L+ L + + Sbjct: 162 YMLRNKTAGDVMDKIKRLIEGGIKVNAQIVLVRGVNDGKELDRTLKDLSALYPGLNSISV 221 Query: 267 KP 268 P Sbjct: 222 VP 223 >gi|15790256|ref|NP_280080.1| coenzyme PQQ synthesis protein [Halobacterium sp. NRC-1] gi|10580720|gb|AAG19560.1| coenzyme PQQ synthesis protein [Halobacterium sp. NRC-1] Length = 356 Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 40/249 (16%), Positives = 80/249 (32%), Gaps = 57/249 (22%) Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 +P+ P ++ ++ C + C C + LS+ + + L Sbjct: 1 MTPVD--TSERPVVLVWEVTQACALACDHCRASARPQR-HPSELSTAEGKQLLTDAAAFG 57 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQC 199 V+ +GGDPL T+ ++H R+ + P + P I+ Sbjct: 58 DGQLVVLSGGDPLARPD--------TVELVEHGTDC--GLRMTVT-PSGTASLTPTAIEA 106 Query: 200 LKEAGKPVYIA--------IHANHPYEFSEEA------IAAISRLANAGIIL-LSQSVLL 244 L +AG + H EF EA + A + G+ L ++ +V Sbjct: 107 LADAGVAQFAVSIDGATPTTH----DEFRGEAGSFERTLRAARAIRELGVPLQVNTTVCA 162 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI-------VASL 297 D E L + EL + + + F + + G+ + + Sbjct: 163 ----DTVEALPAIRDLVAELGVALWSVF----------FLVPVGRGRALDPVSPARAEEV 208 Query: 298 KEKISGLCQ 306 + G+ + Sbjct: 209 MAWLDGVAR 217 >gi|125973540|ref|YP_001037450.1| hypothetical protein Cthe_1025 [Clostridium thermocellum ATCC 27405] gi|125713765|gb|ABN52257.1| protein of unknown function DUF512 [Clostridium thermocellum ATCC 27405] Length = 445 Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 63/182 (34%), Gaps = 60/182 (32%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C C FCF ++ + T+ Y ++ + F G+ + L++ Sbjct: 92 TKSCRNKCIFCFIDQLPKGMRETL-----------YFKDDDS--RLSFFMGNYVTLTNMS 138 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF-- 219 ++ + +K P+ +++H ++P E Sbjct: 139 -------------------------------YDDIDRIIKYKMSPINVSVHTSNP-ELRV 166 Query: 220 -------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRI 266 + + + I RL GI + +Q VL++G+ND E+ L+ L + + Sbjct: 167 YMLRNKTAGDVMDKIKRLIEGGIKVNAQIVLVRGVNDGKELDRTLKDLSALYPGLNSISV 226 Query: 267 KP 268 P Sbjct: 227 VP 228 >gi|312622597|ref|YP_004024210.1| Radical SAM domain-containing protein [Caldicellulosiruptor kronotskyensis 2002] gi|312203064|gb|ADQ46391.1| Radical SAM domain protein [Caldicellulosiruptor kronotskyensis 2002] Length = 341 Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 28/154 (18%), Positives = 59/154 (38%), Gaps = 18/154 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + CP C FC ++ + G ++ L + E L I ++ E+ + GG+ Sbjct: 8 IFIPQYACPFNCIFCNQKTISGEKEEVSLDRIKRQIEQGLK-INLDEEV-ELAYYGGNFT 65 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIH 212 + +K+L+ + ++ +R +R P I+ E + LK I Sbjct: 66 AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLILLKFYNVRTIELGIQSM 120 Query: 213 ANHPYEF------SEEAIAAISRLANAGIILLSQ 240 +H ++ + A+ + G +L Q Sbjct: 121 FDHVLNACARGHTAQHSKNAMEMIKKFGFLLGVQ 154 >gi|289423896|ref|ZP_06425689.1| conserved hypothetical protein [Peptostreptococcus anaerobius 653-L] gi|289155673|gb|EFD04345.1| conserved hypothetical protein [Peptostreptococcus anaerobius 653-L] Length = 442 Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 33/207 (15%), Positives = 71/207 (34%), Gaps = 40/207 (19%) Query: 17 ANLIKKEQIDEIKEISNHYSIALTPVIANL-INPHNPNDPIARQFIPQKEELNILPEERE 75 + + E+I EI+++ NL + ++ R + + EEL+ + Sbjct: 79 YSQVSPEEILEIEDV-------------NLVMGTND-----RRTIVDRIEELDSNSKLST 120 Query: 76 --DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + ++ + R +K+ C YC +C + + S++ + Sbjct: 121 VDDIMKVREFESIEISQNNGKTRAFIKIQDGCDRYCTYC-----IIPYARGRIRSRNIDE 175 Query: 134 ALAYI--QEKSQIWEVIFTGGDPLILSHKRLQKV-----LKTLRYIKHVQILRFHSRVPI 186 I + EV+ TG + + +K + I ++ +R S Sbjct: 176 IREEIITLANNGYKEVVLTGIHVASYGKDLKEDIGILDVIKAVNDIDGIERIRLSS---- 231 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHA 213 V+P E I + + K + H Sbjct: 232 VEPVLFTDEFIDEICKIDK---LVPHF 255 >gi|229159568|ref|ZP_04287582.1| dehydrogenase [Bacillus cereus R309803] gi|228623870|gb|EEK80682.1| dehydrogenase [Bacillus cereus R309803] Length = 375 Score = 44.3 bits (104), Expect = 0.030, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L + L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|229171266|ref|ZP_04298856.1| dehydrogenase [Bacillus cereus MM3] gi|228612223|gb|EEK69455.1| dehydrogenase [Bacillus cereus MM3] Length = 375 Score = 44.3 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L + L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|308069953|ref|YP_003871558.1| hypothetical protein PPE_03202 [Paenibacillus polymyxa E681] gi|305859232|gb|ADM71020.1| Conserved hypothetical protein [Paenibacillus polymyxa E681] Length = 447 Score = 44.3 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 60/145 (41%), Gaps = 23/145 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R LK+ C +C FC G + S+D + +A ++ + E++ TG Sbjct: 143 HTRAFLKIQDGCNNFCTFCIIPWSRG-----LSRSRDAASIIAQARQLVHAGYKEIVLTG 197 Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 GD + + L +L L ++ ++ +R S ++ +I+ +++ L + K Sbjct: 198 IHTGGYGD--DMDNYDLSDLLWDLEKVEGLERIRISS----IEASQIDEKMLDVLNRSTK 251 Query: 206 PVYIAIHANHPYEF-SEEAIAAISR 229 + H + P + + + + R Sbjct: 252 ---LVRHFHIPLQAGDDTVLKRMRR 273 >gi|170756026|ref|YP_001782588.1| RNA modification protein [Clostridium botulinum B1 str. Okra] gi|169121238|gb|ACA45074.1| RNA modification enzyme, MiaB family [Clostridium botulinum B1 str. Okra] Length = 432 Score = 44.3 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%) Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145 + Y D R LK+ C +C +C ++ +G V S K + + + Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189 Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 E+I +G D L +L+ + ++ ++ +R S +DP E I + Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGS----IDPTFFTEEEIIRI 245 Query: 201 KEAGKPVYIAIHA 213 + + H Sbjct: 246 SKLKR---FCPHF 255 >gi|153939005|ref|YP_001392232.1| RNA modification protein [Clostridium botulinum F str. Langeland] gi|152934901|gb|ABS40399.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str. Langeland] gi|295320230|gb|ADG00608.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str. 230613] Length = 432 Score = 44.3 bits (104), Expect = 0.031, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%) Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145 + Y D R LK+ C +C +C ++ +G V S K + + + Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189 Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 E+I +G D L +L+ + ++ ++ +R S +DP E I + Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDRVEGIERIRIGS----IDPTFFTEEEIIRI 245 Query: 201 KEAGKPVYIAIHA 213 + + H Sbjct: 246 SKLKR---FCPHF 255 >gi|225028013|ref|ZP_03717205.1| hypothetical protein EUBHAL_02282 [Eubacterium hallii DSM 3353] gi|224954727|gb|EEG35936.1| hypothetical protein EUBHAL_02282 [Eubacterium hallii DSM 3353] Length = 444 Score = 43.9 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 38/169 (22%), Positives = 65/169 (38%), Gaps = 42/169 (24%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ H C C FCF +M + T+ Y ++ + F G+ + L Sbjct: 83 LMDEYHSCCNKCMFCFIDQMPPGMRDTL-----------YFKDDDS--RLSFLQGNYITL 129 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 ++ R + + +++++H + NPEL + L H Sbjct: 130 TNMRDKDI---------ERVIKYHLSPINISVHTTNPELRCKML-----------H---- 165 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 F+ + + I R AGI + SQ VL +G+ND L RT +L Sbjct: 166 NRFAGDVLDKIGRFYEAGIRMNSQVVLCQGLND----EEELDRTISDLG 210 >gi|320115265|ref|YP_004185424.1| Radical SAM domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|319928356|gb|ADV79041.1| Radical SAM domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 327 Score = 43.9 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 25/160 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +++ + C C FC VG + + D + + +++ + + + TGG+PLI Sbjct: 4 VIIGMTRECNGNCNFC----QVGGPQRDINKRFDYKQLVRFLKGNN--YHIQITGGEPLI 57 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-----KPVYIAI 211 K L +++ L+ H ++ + + + I+ + I+ LKE+ V I Sbjct: 58 -RKKELAPLIQDLKEDGH--MITLLTNLVL-----IDKKFIELLKESFSILDVVQVSIYA 109 Query: 212 HANHPYEF-----SEEAIAA-ISRLANAGIILLSQSVLLK 245 H +E + A I+ L N GI L + L K Sbjct: 110 HNPQLHEIISGRNDWSKLNALITELINNGIQLRANLTLTK 149 >gi|229022012|ref|ZP_04178568.1| dehydrogenase [Bacillus cereus AH1272] gi|228739268|gb|EEL89708.1| dehydrogenase [Bacillus cereus AH1272] Length = 369 Score = 43.9 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L + L I + + TGG+P + Sbjct: 28 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 83 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 84 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 133 Query: 215 H 215 H Sbjct: 134 H 134 >gi|163939949|ref|YP_001644833.1| molybdenum cofactor biosynthesis protein A [Bacillus weihenstephanensis KBAB4] gi|163862146|gb|ABY43205.1| molybdenum cofactor biosynthesis protein A [Bacillus weihenstephanensis KBAB4] Length = 337 Score = 43.9 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LPKLIARLTKLEGLKDIGLTTNGIHLAKQ------ARSLKEAGLKRVNISLD 128 Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H N ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEDHVFRKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175 >gi|167036843|ref|YP_001664421.1| radical SAM domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166855677|gb|ABY94085.1| Radical SAM domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 338 Score = 43.9 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 67/160 (41%), Gaps = 25/160 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +++ + C C FC VG + + D + + +++ + + + TGG+PLI Sbjct: 15 VIIGMTRECNGNCNFC----QVGGPQRDINKRFDYKQLVRFLKGNN--YHIQITGGEPLI 68 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-----KPVYIAI 211 K L +++ L+ H ++ + + + I+ + I+ LKE+ V I Sbjct: 69 -RKKELAPLIQDLKEDGH--MITLLTNLVL-----IDKKFIELLKESFSILDVVQVSIYA 120 Query: 212 HANHPYEF-----SEEAIAA-ISRLANAGIILLSQSVLLK 245 H +E + A I+ L N GI L + L K Sbjct: 121 HNPQLHEIISGRNDWSKLNALITELINNGIQLRANLTLTK 160 >gi|258542214|ref|YP_003187647.1| molybdenum cofactor biosynthesis protein A [Acetobacter pasteurianus IFO 3283-01] gi|256633292|dbj|BAH99267.1| molybdenum cofactor biosynthesis protein A [Acetobacter pasteurianus IFO 3283-01] gi|256636351|dbj|BAI02320.1| molybdenum cofactor biosynthesis protein A [Acetobacter pasteurianus IFO 3283-03] gi|256639404|dbj|BAI05366.1| molybdenum cofactor biosynthesis protein A [Acetobacter pasteurianus IFO 3283-07] gi|256642460|dbj|BAI08415.1| molybdenum cofactor biosynthesis protein A [Acetobacter pasteurianus IFO 3283-22] gi|256645515|dbj|BAI11463.1| molybdenum cofactor biosynthesis protein A [Acetobacter pasteurianus IFO 3283-26] gi|256648568|dbj|BAI14509.1| molybdenum cofactor biosynthesis protein A [Acetobacter pasteurianus IFO 3283-32] gi|256651621|dbj|BAI17555.1| molybdenum cofactor biosynthesis protein A [Acetobacter pasteurianus IFO 3283-01-42C] gi|256654612|dbj|BAI20539.1| molybdenum cofactor biosynthesis protein A [Acetobacter pasteurianus IFO 3283-12] Length = 338 Score = 43.9 bits (103), Expect = 0.032, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 52/174 (29%), Gaps = 37/174 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C M + VL+ + + + + TGG+PL+ Sbjct: 18 VSVTDRCDMRCTYCMAERMTFLPRSDVLNYDELLRLCRVFVQH-GVRRLRITGGEPLVRR 76 Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHS-----------------RVPIVDPQRINPEL 196 + L LK ++ L + R V ++ Sbjct: 77 DIGPFFQELGSWLKHSDNRGQLEELTLTTNGSHLAQYAQTLFDAGVRRVNVSLDTLDEAR 136 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + GK + I + G+ L +V + G+NDD Sbjct: 137 FAKITRRGK--------------LAATLEGIRAARDVGLALRINTVAMAGVNDD 176 >gi|294791673|ref|ZP_06756821.1| radical SAM domain protein [Veillonella sp. 6_1_27] gi|294456903|gb|EFG25265.1| radical SAM domain protein [Veillonella sp. 6_1_27] Length = 391 Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 30/167 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155 CP C FC + + G + L+ + + + Y+ + + WEV F GG Sbjct: 5 FIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWEVAFYGG-SF 63 Query: 156 ILSHKRLQK-VLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210 K LQ +L + + +R +R P + E I L+ G K V + Sbjct: 64 TAITKDLQHKLLMPAYEMLQQGLIDGIRCSTR-----PDAVGDEAITLLQSYGVKTVELG 118 Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 + + H + E + A++RL + + + Q LL G Sbjct: 119 VQSMNDGILVDAKRGHTAQ---EVVEAVTRLKHRDMTVGVQ--LLPG 160 >gi|284048503|ref|YP_003398842.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731] gi|283952724|gb|ADB47527.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731] Length = 292 Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 31/73 (42%), Gaps = 5/73 (6%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDP 154 L++ C CRFC +V + L I++ ++ + G DP Sbjct: 17 CFLQVTSGCSHNKCRFCT---FYKEAPFSVSPESEIREDLQEIRDSGWKVKRIFLQGADP 73 Query: 155 LILSHKRLQKVLK 167 +LS+ RL++++ Sbjct: 74 FLLSYDRLKRIMD 86 >gi|218887708|ref|YP_002437029.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758662|gb|ACL09561.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 427 Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 34/188 (18%), Positives = 67/188 (35%), Gaps = 40/188 (21%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAY----IQEKSQIWEVI 148 R+ + + C + C +C R+ ++ ++S AL Y + +I + Sbjct: 23 GRVHVPVAPRCNIQCGYCNRKYDCVNESRPGVTSAVLSPRQALDYVDKVLAADPRITVIG 82 Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 G GDP+ + L+ + L + +H ++L S + P + LKE G Sbjct: 83 IAGPGDPMANPAETLETL--RLVHERHPELLFCLSSNGLGLP-----PHLDRLKELGVTH 135 Query: 208 YIAIHANHP---------------------YEFSEEAIAA----ISRLANAGIILLSQSV 242 N E +E +A + L G+++ ++ Sbjct: 136 VTVT-INAVDPAIGEKLYSWVRDDKVVWRGREAAELLLARQLESVRGLVERGMVVKVNTI 194 Query: 243 LLKGINDD 250 L+ G+ND Sbjct: 195 LVPGVNDR 202 >gi|159901008|ref|YP_001547255.1| MiaB-like tRNA modifying enzyme YliG [Herpetosiphon aurantiacus ATCC 23779] gi|238066313|sp|A9AZS3|RIMO_HERA2 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|159894047|gb|ABX07127.1| MiaB-like tRNA modifying enzyme YliG [Herpetosiphon aurantiacus ATCC 23779] Length = 469 Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 32/189 (16%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPD-RILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 L++ P D +G I LK+ C + C FC G + Sbjct: 141 LSLTPAATGDSLGAYGDWRTTAITRNKRGPSAYLKISDGCNLRCAFCTIPSFKGDMRSKA 200 Query: 126 L------SSKDTEAALAYI---QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHV 175 + + + EA + I + + G D L + L +L+ L + Sbjct: 201 VGSILGEARELVEAGVQEIILVAQH-----LTDYGRD-LGMKQNGLGVLLEELAAVVPAD 254 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAG---KPVYIAIHANHPYEF--------SEEAI 224 + +R PQ + P+L++ + V + + HP +++ Sbjct: 255 RWIRL----MYAYPQSVTPDLVETMARLPQLCHYVDMPLQHAHPDTLRRMRRPPDTDKTK 310 Query: 225 AAISRLANA 233 A ++ L A Sbjct: 311 AIVNSLRQA 319 >gi|229114076|ref|ZP_04243501.1| dehydrogenase [Bacillus cereus Rock1-3] gi|228669346|gb|EEL24763.1| dehydrogenase [Bacillus cereus Rock1-3] Length = 375 Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L + L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|86143254|ref|ZP_01061656.1| molybdenum cofactor biosynthesis protein A [Leeuwenhoekiella blandensis MED217] gi|85830159|gb|EAQ48619.1| molybdenum cofactor biosynthesis protein A [Leeuwenhoekiella blandensis MED217] Length = 335 Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 22/189 (11%) Query: 90 VH-RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 H R + + + L C + C +C + + S + ++S+++ EA E + ++ Sbjct: 11 THGRKHNYLRISLSEKCNLRCTYCMPHDGIPLSPRANLMSAEEIEAFAKVFVEN-GVDKI 69 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KP 206 TGG+PL+ +LK L + V+ L + + I K+ G K Sbjct: 70 RLTGGEPLVRKD--FSDILKRLAKLP-VK-LSITTNAL------LTHRFIADFKKYGLKD 119 Query: 207 VYIAIHANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGINDDPEILANLM 258 + +++ + + +F+ I +L G + +VL+K N+D + + Sbjct: 120 INVSLDSLNAEKFNFITRRDQYKKAFTNIEQLIKEGFNVKINAVLMKNFNEDEIVEFIKL 179 Query: 259 RTFVELRIK 267 ++ ++ Sbjct: 180 TRERDINVR 188 >gi|299144166|ref|ZP_07037246.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518651|gb|EFI42390.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 435 Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 28/130 (21%) Query: 95 DRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R +K+ C YC +C R + ++ A Y E+I T Sbjct: 145 TRAYIKVQDGCNRYCTYCIIPFARGNIRSRSIEDSMNEARKLAKAGY-------KEIILT 197 Query: 151 G-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + +RL +++ + I ++ +R S ++P+ I + ++ + Sbjct: 198 GIHIGSYGYD---IGKERLIDLIENIASIDGIERIRLSS----IEPRTITDDFMKRVVAT 250 Query: 204 GKPVYIAIHA 213 K + H Sbjct: 251 NK---LCDHF 257 >gi|228989607|ref|ZP_04149591.1| dehydrogenase [Bacillus pseudomycoides DSM 12442] gi|228995795|ref|ZP_04155455.1| dehydrogenase [Bacillus mycoides Rock3-17] gi|229003415|ref|ZP_04161235.1| dehydrogenase [Bacillus mycoides Rock1-4] gi|228757793|gb|EEM07018.1| dehydrogenase [Bacillus mycoides Rock1-4] gi|228763956|gb|EEM12843.1| dehydrogenase [Bacillus mycoides Rock3-17] gi|228770144|gb|EEM18724.1| dehydrogenase [Bacillus pseudomycoides DSM 12442] Length = 410 Score = 43.9 bits (103), Expect = 0.033, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L + L I + + TGG+P + Sbjct: 69 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 124 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 125 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 174 Query: 215 H 215 H Sbjct: 175 H 175 >gi|282917614|ref|ZP_06325366.1| LOW QUALITY PROTEIN: molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus D139] gi|282318576|gb|EFB48934.1| LOW QUALITY PROTEIN: molybdenum cofactor biosynthesis protein A [Staphylococcus aureus subsp. aureus D139] Length = 217 Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 59/173 (34%), Gaps = 36/173 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154 L + C C +C +E+ G + ++ D A +A + + + ++ TGG+P Sbjct: 18 LSVTDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITGGEP 77 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRVPIVDPQRINPELI 197 L+ L ++ L I ++ + R V I+ L Sbjct: 78 LMRRD--LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLF 135 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 Q + + + I + G+ + V+ KGINDD Sbjct: 136 QSINNRNIK-------------ATTILEQIDYATSIGLNVKVNVVIQKGINDD 175 >gi|288942731|ref|YP_003444971.1| nitrogenase cofactor biosynthesis protein NifB [Allochromatium vinosum DSM 180] gi|288898103|gb|ADC63939.1| nitrogenase cofactor biosynthesis protein NifB [Allochromatium vinosum DSM 180] Length = 500 Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 40/221 (18%), Positives = 69/221 (31%), Gaps = 65/221 (29%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGS 120 +N P ED H Y R+ + + C + C +C R+ G Sbjct: 35 VNNHPCFSEDA------------HHHYA-RMHVAVAPACNIQCHYCNRKYDCANESRPGV 81 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQ---------------- 163 + + + LA Q+ + G GDPL + L+ Sbjct: 82 VSELLTPDQAVKKVLAVAAAIPQMTVLGIAGPGDPLANPERTLETFRQLAEKAPDIRLCV 141 Query: 164 --------KVLKTLRY--IKHVQILRFHSRVPIVDP---QRINPELI--QCLKEAGKPVY 208 ++ L I+HV + + VDP +I P + + K Sbjct: 142 STNGLALPDLVDELCQYNIEHV-TITIN----CVDPDVGAKIYPWIFWNNRRIKGRKAAE 196 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 I + +L G+++ SVL+ G+ND Sbjct: 197 I---------LIRRQQEGLEKLVARGVLVKVNSVLIPGVND 228 >gi|319954255|ref|YP_004165522.1| gtp cyclohydrolase subunit moaa [Cellulophaga algicola DSM 14237] gi|319422915|gb|ADV50024.1| GTP cyclohydrolase subunit MoaA [Cellulophaga algicola DSM 14237] Length = 327 Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 25/136 (18%), Positives = 55/136 (40%), Gaps = 16/136 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C E + ++ + + + L+ I I ++ TGG+P + Sbjct: 15 LAVTDRCNLRCNYCMPSEGIDFAENDKLFTIDELIR-LSQILITQGITKIRITGGEPFVR 73 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 L +L+ L I ++ + + ++ P I LK G K + +++ A Sbjct: 74 KD--LMVLLRELSKIDALEDISITTNATVIGPY------ISELKALGIKNINVSLDA--- 122 Query: 217 YEFSEEAIAAISRLAN 232 +++ I+R Sbjct: 123 --ITKDVFEKITRRKQ 136 >gi|296132280|ref|YP_003639527.1| molybdenum cofactor biosynthesis protein A [Thermincola sp. JR] gi|296030858|gb|ADG81626.1| molybdenum cofactor biosynthesis protein A [Thermincola potens JR] Length = 326 Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 37/165 (22%), Positives = 68/165 (41%), Gaps = 24/165 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C C +C E V + +LS ++ + K I ++ TGG+PL+ Sbjct: 14 VSVTDRCNYRCVYCMPAEGVPMHCRDEILSLEEILKVIKS-STKLGIRKIRLTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 K + +++ + I + + + + P LKEAG K V I++ P Sbjct: 72 -RKGIINLVQGIARIPQIDDIALTTNG-ALLPA-----YATALKEAGLKRVNISLDTLKP 124 Query: 217 YEFSEEAIAAISRLAN--AGI---------ILLSQSVLLKGINDD 250 F + + RL + AGI + +V+++G NDD Sbjct: 125 DRFRQITR--VGRLQDVWAGIEAAWEEGFEPVKINTVVIRGFNDD 167 >gi|270294216|ref|ZP_06200418.1| radical SAM domain-containing protein [Bacteroides sp. D20] gi|270275683|gb|EFA21543.1| radical SAM domain-containing protein [Bacteroides sp. D20] Length = 292 Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 32/65 (49%), Gaps = 1/65 (1%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 D++ + + + C C FC + V++ + + + Y++ +I E+ F+GG+P Sbjct: 8 DKLRILVTNGCNYRCPFCHNEGQTSKDRFNVMNLDNFKLLIDYLK-DEEISEITFSGGEP 66 Query: 155 LILSH 159 + + Sbjct: 67 FLNPN 71 >gi|229074347|ref|ZP_04207385.1| dehydrogenase [Bacillus cereus Rock4-18] gi|229095122|ref|ZP_04226117.1| dehydrogenase [Bacillus cereus Rock3-29] gi|229101224|ref|ZP_04231988.1| dehydrogenase [Bacillus cereus Rock3-28] gi|228682192|gb|EEL36305.1| dehydrogenase [Bacillus cereus Rock3-28] gi|228688307|gb|EEL42190.1| dehydrogenase [Bacillus cereus Rock3-29] gi|228708789|gb|EEL60924.1| dehydrogenase [Bacillus cereus Rock4-18] Length = 375 Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L + L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|149907724|ref|ZP_01896471.1| radical SAM domain protein [Moritella sp. PE36] gi|149809394|gb|EDM69323.1| radical SAM domain protein [Moritella sp. PE36] Length = 295 Score = 43.9 bits (103), Expect = 0.034, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%) Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSK--DTEA-ALAYIQEKSQIWEVIFTGG 152 ++L++ + C C FC +M + + K D EA L+ + + V G Sbjct: 19 LILQVANGCSWNNCTFC---DMYTQPQKKFRAKKIADIEAEILSVVASGQKHQRVFLADG 75 Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178 D + L KRL+++L +R + HVQ + Sbjct: 76 DAMTLPFKRLKEILLLIRKHMPHVQRV 102 >gi|332298374|ref|YP_004440296.1| MiaB-like tRNA modifying enzyme [Treponema brennaborense DSM 12168] gi|332181477|gb|AEE17165.1| MiaB-like tRNA modifying enzyme [Treponema brennaborense DSM 12168] Length = 515 Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 23/129 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C R + + ++ ++ E + I+ ++Q EV+ TG + Sbjct: 188 HSRASIKIQDGCNNACTYC-RIHLARGKAVSLDAASVLER-VRSIEARNQ-HEVVLTGVN 244 Query: 154 ---------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 L L + L + + + +RF R+ + P+R++ L + + Sbjct: 245 LSQYRGSFGSFFLDIAGLLRFL-----LDNTERIRF--RLSSLYPERVDDALCEVIAHER 297 Query: 205 KPVYIAIHA 213 I H Sbjct: 298 ----IMPHF 302 >gi|304403939|ref|ZP_07385601.1| RNA modification enzyme, MiaB family [Paenibacillus curdlanolyticus YK9] gi|304346917|gb|EFM12749.1| RNA modification enzyme, MiaB family [Paenibacillus curdlanolyticus YK9] Length = 464 Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 60/168 (35%), Gaps = 38/168 (22%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C FC G + S E + + E++ TG Sbjct: 143 RTRAFLKIQEGCNNFCTFCIIPWSRGLSRSRDPKSVIAQAEQLVE-----AGYKEIVLTG 197 Query: 152 ------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 GD L + RL +L L ++ ++ +R S ++ +I+ ++I L + K Sbjct: 198 IHTGGYGD--DLENYRLSDLLWDLDKVEGLERIRISS----IEASQIDDKMIDVLNRSSK 251 Query: 206 PVYIAIHANHPYEF--------------SEEAIAAISRLANA--GIIL 237 + +H P + + E + L A G+ + Sbjct: 252 -MCRHLHI--PLQAGEDAVLKRMRRKYTTAEFAEKVKMLHRAMPGVAI 296 >gi|229083725|ref|ZP_04216046.1| dehydrogenase [Bacillus cereus Rock3-44] gi|228699583|gb|EEL52247.1| dehydrogenase [Bacillus cereus Rock3-44] Length = 375 Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L + L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|256423142|ref|YP_003123795.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis DSM 2588] gi|256038050|gb|ACU61594.1| molybdenum cofactor biosynthesis protein A [Chitinophaga pinensis DSM 2588] Length = 326 Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 38/175 (21%), Positives = 65/175 (37%), Gaps = 32/175 (18%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 VH Y + + L C + C +C E + L D A LA I + + ++ Sbjct: 9 VHDY---LRISLTDNCNLRCFYCMPEEDYDFTPASRLMQADEIATLAGIFTANGVRKIRL 65 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL-----RFHSRVPIVDPQRINPELIQCLKEAG 204 TGG+PL+ K++ +L + + R H E L+EAG Sbjct: 66 TGGEPLVRKDA--AKIILSLSRLPVELTMTTNGARLH-------------EFADVLEEAG 110 Query: 205 ---KPVYIAI------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + + + + I L N GI + V++KG+ND+ Sbjct: 111 IRSLNISLDTLQADKFMLITRRDLFHQVKSNIDLLLNMGIRVKVNVVMMKGLNDN 165 >gi|163938411|ref|YP_001643295.1| YfkB-like domain-containing protein [Bacillus weihenstephanensis KBAB4] gi|229009905|ref|ZP_04167124.1| dehydrogenase [Bacillus mycoides DSM 2048] gi|163860608|gb|ABY41667.1| YfkB-like domain protein [Bacillus weihenstephanensis KBAB4] gi|228751336|gb|EEM01143.1| dehydrogenase [Bacillus mycoides DSM 2048] Length = 375 Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L + L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|307565379|ref|ZP_07627870.1| MiaB-like protein [Prevotella amnii CRIS 21A-A] gi|307345911|gb|EFN91257.1| MiaB-like protein [Prevotella amnii CRIS 21A-A] Length = 452 Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C +C G + + S K E A+A E++ TG Sbjct: 158 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPPIKSLVKQAEEAVA-----EGGREIVLTG 212 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GD +++ ++K L +K ++ R S ++P I+ +LI+ + Sbjct: 213 VNIGDFGRTTNESFLDLVKALDNVKGIERYRISS----LEPDLIDDDLIEYCATSEH--- 265 Query: 209 IAIHA 213 H Sbjct: 266 FMPHF 270 >gi|227485372|ref|ZP_03915688.1| thiamine biosynthesis protein ThiH [Anaerococcus lactolyticus ATCC 51172] gi|227236663|gb|EEI86678.1| thiamine biosynthesis protein ThiH [Anaerococcus lactolyticus ATCC 51172] Length = 472 Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 47/117 (40%), Gaps = 5/117 (4%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117 E +L +ED + + K + H+ Y +RI+L + C C +C Sbjct: 51 SHREAFVLLSCKEDDLNEEIFKLAKDLKHKFYANRIVLFAPLYLSNYCVNGCVYCPYHGQ 110 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 S LS ++ + + +Q++ + G DP+ + + + T+ IKH Sbjct: 111 NRSIPRKKLSQEEIKEQVIALQDQGHKRLALEAGEDPINNPIDYILESIHTIYNIKH 167 >gi|168211168|ref|ZP_02636793.1| radical SAM domain protein [Clostridium perfringens B str. ATCC 3626] gi|169344594|ref|ZP_02865560.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495] gi|169297204|gb|EDS79316.1| radical SAM domain protein [Clostridium perfringens C str. JGS1495] gi|170710824|gb|EDT23006.1| radical SAM domain protein [Clostridium perfringens B str. ATCC 3626] Length = 418 Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 8/118 (6%) Query: 64 KEELNILPEEREDPIGDNNHSPL---KGIVHRYPDRILLKLLHVCPVYCRFCFR-REMVG 119 KEEL + E+ I + KG + L L C + C +C++ + + Sbjct: 47 KEELKSMGFSLENNINEIELMKCTLNKGKFSEKSMTLFLSLTRQCNLNCSYCYQDKRKMM 106 Query: 120 SQKGTVLSSKDTEAALAYIQEKS-QIWEVIFT--GGDPLILSHKRLQKVLKTLRYIKH 174 ++ + L+ D ++++KS + E+ T GG+PL L+ + +++ L +K+ Sbjct: 107 DKENSFLNKNDWFKIFEFLKKKSVNLNELHITLFGGEPL-LNKSIILQIIDDLNSLKN 163 >gi|196043992|ref|ZP_03111229.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus 03BB108] gi|225866714|ref|YP_002752092.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus 03BB102] gi|196025328|gb|EDX63998.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus 03BB108] gi|225787425|gb|ACO27642.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus 03BB102] Length = 337 Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175 >gi|118479860|ref|YP_897011.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis str. Al Hakam] gi|118419085|gb|ABK87504.1| GTP cyclohydrolase subunit MoaA [Bacillus thuringiensis str. Al Hakam] Length = 339 Score = 43.9 bits (103), Expect = 0.035, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177 >gi|226227077|ref|YP_002761183.1| molybdenum cofactor biosynthesis protein A [Gemmatimonas aurantiaca T-27] gi|226090268|dbj|BAH38713.1| molybdenum cofactor biosynthesis protein A [Gemmatimonas aurantiaca T-27] Length = 323 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 21/173 (12%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C C++C E + KG +L ++ + + + + TGG+P I Sbjct: 14 ISVTDRCNFRCQYCMPVEGLPWLPKGDILRYEEIADIVGQLAPM-GLKRLRITGGEPTI- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216 L ++++ LR I ++ + + + PQ + L EAG V I+ + P Sbjct: 72 -RPELPRLIRMLRDIPGIEDIALSTNG-VKLPQ-----MSDALAEAGLHRVNISADSLRP 124 Query: 217 YEFSEEAIA--------AISRLANAGI-ILLSQSVLLKGINDD-PEILANLMR 259 A A AGI + V+++GINDD A L R Sbjct: 125 DRVVAIARRDLGFDLKTAALAAERAGIGPIKINVVVMRGINDDEVADFAALTR 177 >gi|317051787|ref|YP_004112903.1| MiaB-like tRNA modifying enzyme [Desulfurispirillum indicum S5] gi|316946871|gb|ADU66347.1| MiaB-like tRNA modifying enzyme [Desulfurispirillum indicum S5] Length = 426 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 19/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 +R+ LK+ C C +C G + + + A + E+I TG Sbjct: 136 DERVNLKIQDGCDNTCSYCLVTIARGPSR--SIKMEHVLETAAELAHT--FDEIILTGVH 191 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D + L ++++ L I H+ LR S ++P I+ ++ L + Sbjct: 192 IGSYGKD--LAEPSSLGRLMERLLEIPHLGRLRLSS----IEPAEIDETILGLL--SHPK 243 Query: 207 VYIAIHAN 214 + +H + Sbjct: 244 LCRHLHIS 251 >gi|228917377|ref|ZP_04080930.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228842304|gb|EEM87399.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 339 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177 >gi|229124294|ref|ZP_04253485.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus 95/8201] gi|228659195|gb|EEL14844.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus 95/8201] Length = 339 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177 >gi|170758363|ref|YP_001788268.1| RNA modification protein [Clostridium botulinum A3 str. Loch Maree] gi|169405352|gb|ACA53763.1| RNA modification enzyme, MiaB family [Clostridium botulinum A3 str. Loch Maree] Length = 432 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 27/134 (20%), Positives = 51/134 (38%), Gaps = 23/134 (17%) Query: 90 VHRYPD--RILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 + Y D R LK+ C +C +C F R V S+K + ++ + + + Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYCLIPFARGAVCSKKPEKI-MEEVQK----LSKH-GF 188 Query: 145 WEVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 E+I +G D L +L+ + ++ +Q +R S +DP E I Sbjct: 189 KEIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIQRIRIGS----IDPTFFTEEEIMR 244 Query: 200 LKEAGKPVYIAIHA 213 + + + H Sbjct: 245 ISKLKR---FCPHF 255 >gi|196040891|ref|ZP_03108189.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus NVH0597-99] gi|301056234|ref|YP_003794445.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis CI] gi|196028345|gb|EDX66954.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus NVH0597-99] gi|300378403|gb|ADK07307.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus biovar anthracis str. CI] Length = 337 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175 >gi|167633892|ref|ZP_02392215.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0442] gi|170685934|ref|ZP_02877157.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0465] gi|254687534|ref|ZP_05151390.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. CNEVA-9066] gi|254725099|ref|ZP_05186882.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A1055] gi|254741872|ref|ZP_05199559.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Kruger B] gi|167530693|gb|EDR93395.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0442] gi|170670398|gb|EDT21138.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. A0465] Length = 337 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175 >gi|196032982|ref|ZP_03100395.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W] gi|218905955|ref|YP_002453789.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820] gi|195994411|gb|EDX58366.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus W] gi|218538708|gb|ACK91106.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH820] Length = 337 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175 >gi|153816459|ref|ZP_01969127.1| hypothetical protein RUMTOR_02712 [Ruminococcus torques ATCC 27756] gi|331087554|ref|ZP_08336485.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Lachnospiraceae bacterium 3_1_46FAA] gi|145846201|gb|EDK23119.1| hypothetical protein RUMTOR_02712 [Ruminococcus torques ATCC 27756] gi|330400694|gb|EGG80298.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Lachnospiraceae bacterium 3_1_46FAA] Length = 483 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 66/158 (41%), Gaps = 32/158 (20%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + I + D I ++ S +YP + + ++ C +C +C + Sbjct: 167 MVIDIWKDTDKIVEDLPS-----ERKYPFKSGVNIMFGCNNFCSYC-----IVPYVRGRE 216 Query: 127 SSKDTEAALAYIQEKSQ--IWEVIFTGGD----------PLILSHKRLQKVLKTLRYIKH 174 S+D +A + I+ ++ + EV+ G + P+ ++L+ + I Sbjct: 217 RSRDPKAIIREIERLAEDGVVEVMLLGQNVNSYGKTLEHPMTF-----AQLLREIEKIDK 271 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 ++ +RF + P+ ++ ELI+ + ++ K + +H Sbjct: 272 IERIRFMTSH----PKDLSDELIEVMAQS-KKICRHLH 304 >gi|77919453|ref|YP_357268.1| putative MiaB-like tRNA modifying enzyme [Pelobacter carbinolicus DSM 2380] gi|77545536|gb|ABA89098.1| putative MiaB-like tRNA modifying enzyme [Pelobacter carbinolicus DSM 2380] Length = 432 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 53/142 (37%), Gaps = 16/142 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFT-- 150 R +++ + C +C +C G + + L + + + +I Sbjct: 138 RSRAFVQIQNGCNAFCSYCIIPHARGPSR-SALPQQVVDQVCKFCTAGFPEIVLTGIHIG 196 Query: 151 --GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 G D + L +++ L V LR S ++PQ ++ ELI + + Sbjct: 197 GYGND--LQPPLSLADLVRRLLDDTQVSRLRLGS----IEPQEVSMELIDLVAHCER--- 247 Query: 209 IAIHANHPYEF-SEEAIAAISR 229 + H + P + + + A++R Sbjct: 248 LCPHFHIPLQAGDDAVLKAMNR 269 >gi|49478739|ref|YP_038771.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar konkukian str. 97-27] gi|228936036|ref|ZP_04098846.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|49330295|gb|AAT60941.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar konkukian str. 97-27] gi|228823804|gb|EEM69626.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 339 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177 >gi|52140778|ref|YP_086052.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L] gi|51974247|gb|AAU15797.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus E33L] Length = 337 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175 >gi|306821751|ref|ZP_07455347.1| molybdenum cofactor biosynthesis protein A [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550220|gb|EFM38215.1| molybdenum cofactor biosynthesis protein A [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 145 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 20/93 (21%), Positives = 42/93 (45%), Gaps = 8/93 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREM--VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 + L L C + C +C + V QK ++S + Y+ + I + TGG+P Sbjct: 12 VRLSLTDRCNLNCVYCMPKGQSPVFLQKDEIMSVDEIYKICLYLSK-IGIDTIKLTGGEP 70 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF---HSRV 184 L+ ++V+K ++ I ++ + +R+ Sbjct: 71 LLRED--FEEVVKKIKTIDEIKNITLTTNGTRL 101 >gi|229013933|ref|ZP_04171059.1| Molybdenum cofactor biosynthesis protein A [Bacillus mycoides DSM 2048] gi|228747353|gb|EEL97230.1| Molybdenum cofactor biosynthesis protein A [Bacillus mycoides DSM 2048] Length = 339 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C + C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K+++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ + I AG+ + V+ KG+ND Sbjct: 131 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 177 >gi|229062411|ref|ZP_04199727.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH603] gi|228716882|gb|EEL68569.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH603] Length = 339 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C + C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K+++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ + I AG+ + V+ KG+ND Sbjct: 131 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 177 >gi|229135567|ref|ZP_04264350.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-ST196] gi|228647909|gb|EEL03961.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-ST196] Length = 339 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C + C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K+++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ + I AG+ + V+ KG+ND Sbjct: 131 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 177 >gi|229169460|ref|ZP_04297166.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621] gi|228614018|gb|EEK71137.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH621] Length = 339 Score = 43.9 bits (103), Expect = 0.036, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 60/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C + C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNLRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K+++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIERLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ + I AG+ + V+ KG+ND Sbjct: 131 AIDDNVFRAINGRNMNTKPVLKGIMAAKEAGLEVKVNMVVKKGMNDH 177 >gi|294501748|ref|YP_003565448.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium QM B1551] gi|294351685|gb|ADE72014.1| molybdenum cofactor biosynthesis protein A [Bacillus megaterium QM B1551] Length = 338 Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 20/89 (22%), Positives = 38/89 (42%), Gaps = 8/89 (8%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 L + C CR+C E+ G+ +LS + E + + +V TGG+ Sbjct: 18 LSVTDRCNFRCRYCMPEEIFGADYPFLPAENILSFDELERLTR-LFALLGVKKVRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS 182 PL+ K L ++ L+ I+ + + + Sbjct: 77 PLL--RKGLPDLINRLKQIEGIDDIAITT 103 >gi|229056258|ref|ZP_04195679.1| dehydrogenase [Bacillus cereus AH603] gi|229165420|ref|ZP_04293204.1| dehydrogenase [Bacillus cereus AH621] gi|228618018|gb|EEK75059.1| dehydrogenase [Bacillus cereus AH621] gi|228721063|gb|EEL72601.1| dehydrogenase [Bacillus cereus AH603] Length = 369 Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 41/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L + L I + + TGG+P + Sbjct: 28 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMELLLKRLDEI---PHLRSLSITGGEP-M 83 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 84 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 133 Query: 215 H 215 H Sbjct: 134 H 134 >gi|145631425|ref|ZP_01787195.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021] gi|144982962|gb|EDJ90471.1| predicted lysine 2,3-aminomutase [Haemophilus influenzae R3021] Length = 41 Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 15/36 (41%) Query: 285 LTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKV 320 ++ E +I +L+ SG P ++ G K Sbjct: 2 ISDIEAMQIYKTLQSLTSGYLVPKLAREIAGEPNKT 37 >gi|119962194|ref|YP_947341.1| molybdenum cofactor biosynthesis protein A [Arthrobacter aurescens TC1] gi|119949053|gb|ABM07964.1| molybdopterin cofactor synthesis protein A [Arthrobacter aurescens TC1] Length = 379 Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 40/190 (21%), Positives = 73/190 (38%), Gaps = 36/190 (18%) Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 G+ RY R L L C + C +C E + K V++ + + Sbjct: 36 GLWDRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLSKQAVMTKDEIVRIVRVGVNALG 95 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELI 197 + E+ TGG+PL+ + L +++ +R H P + + Sbjct: 96 VRELRLTGGEPLVRAD--LVEIIAGIRS-DHPD-----------LPISMTTNGVGLDKKA 141 Query: 198 QCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGI 247 Q LK AG + +++ + H F++ AG+ + +VL++GI Sbjct: 142 QALKAAGLTRINVSLDSLHEETFTKLTRRPFLDRVLAGVDAAWAAGLGPVKLNAVLMRGI 201 Query: 248 ND--DPEILA 255 ND P++LA Sbjct: 202 NDAESPDLLA 211 >gi|154504516|ref|ZP_02041254.1| hypothetical protein RUMGNA_02020 [Ruminococcus gnavus ATCC 29149] gi|153794998|gb|EDN77418.1| hypothetical protein RUMGNA_02020 [Ruminococcus gnavus ATCC 29149] Length = 430 Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152 R +K+ C +C +C G + + +D A + + + EV+ TG Sbjct: 142 HTRAYIKVQDGCNQFCSYCIIPYARGRVRSR--AKEDVVAEVTDLAKN-GYQEVVLTGIH 198 Query: 153 ------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D + L +++ + I+ ++ +R S ++P+ I E +Q + K Sbjct: 199 LSSYGID--FENEDNLLSLIRAVHEIEGIKRIRLGS----LEPRIITEEFVQAIAALPK- 251 Query: 207 VYIAIHA 213 + H Sbjct: 252 --MCPHF 256 >gi|328766119|gb|EGF76180.1| hypothetical protein BATDEDRAFT_28746 [Batrachochytrium dendrobatidis JAM81] Length = 1450 Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 57/316 (18%), Positives = 114/316 (36%), Gaps = 77/316 (24%) Query: 46 LINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL-----LK 100 LI+ P D +A Q ++L I IG + L H Y RI+ + Sbjct: 1085 LISKSAPTD-LALQ---LADDLGITA------IGFARGNRLNIYTHPY--RIIEANLRIS 1132 Query: 101 LLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 ++ C C +C F R+ V K +LS ++ E E I ++ TGG+PL Sbjct: 1133 VIDRCNFRCTYCMPKEIFGRDFVFMPKDQLLSFEEIERLAKNFVE-LGIRKIRLTGGEPL 1191 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHS------------------RVPIVDPQRINPELI 197 + L +++ L +K ++ + + R+ + ++ + Sbjct: 1192 LRRD--LPILIERLTRMKDLEDIALTTNGSLLGALASKLKDAGLDRINVSL-DALDDAIF 1248 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 + + ++G P + I + G+ + V+ KG+ND + + Sbjct: 1249 KKINDSGVG---------PERI----LRGIKKAHAVGLEVKVNMVVKKGMNDS--QIVPM 1293 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILDLPGG 316 F E I Y+ D T+ + + + ++I+ LK + L+ Sbjct: 1294 ANYFKENGITLRYIEFMD-VGQTNGWDFSKVITKKEIIEKLKGN--------FALE---- 1340 Query: 317 YGKVKIDTHNIKKVGN 332 ++ + I +V Sbjct: 1341 ----PVEPNYIGEVAK 1352 >gi|304406819|ref|ZP_07388474.1| molybdenum cofactor biosynthesis protein A [Paenibacillus curdlanolyticus YK9] gi|304344352|gb|EFM10191.1| molybdenum cofactor biosynthesis protein A [Paenibacillus curdlanolyticus YK9] Length = 333 Score = 43.9 bits (103), Expect = 0.037, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 64/174 (36%), Gaps = 23/174 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y + + + C + C +C E V +LS + + + Sbjct: 9 GRVHNY---LRISVTDRCNLRCVYCMPEEGVQFTDTSNLLSYDHIVELVQS-AASLGVTK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 + TGG+PL+ L ++ L I + + + ++ Q + L+ AG Sbjct: 65 LRITGGEPLV--RPGLDGLISRLSRIPGISDIALTTNGLLLAQQ------AEALRAAGLN 116 Query: 207 -VYIAIHANHPYEF-----SEEAIAAISRLANAGI----ILLSQSVLLKGINDD 250 V I++ F E + + AG + VLL+G+N+D Sbjct: 117 RVNISLDTLDSTRFKFIARRGELRRVMEGIEAAGRVGFDPIKLNCVLLRGVNED 170 >gi|313226405|emb|CBY21549.1| unnamed protein product [Oikopleura dioica] Length = 347 Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 68/166 (40%), Gaps = 21/166 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + CR+C E V + +LS+++ + + + + + ++ TGG+PL+ Sbjct: 25 ISLTEKCNLRCRYCMPIEGVKLTPSDQLLSAQELYRFSSLLVKNAGVQKIRLTGGEPLV- 83 Query: 158 SHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY------- 208 + +Q+++ L + V+ + + + ++ + L++AG Sbjct: 84 -RREIQEIISDLNSLRDDGVKQIGITTNGVALSKRK-----AKRLRDAGLDTANISLDTL 137 Query: 209 --IAIHANHPYE--FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + AI +AGI VL +G+NDD Sbjct: 138 EPMKAEFITRRSKDMHYSVMKAIENSIDAGITTKINCVLQRGLNDD 183 >gi|281357638|ref|ZP_06244125.1| Radical SAM domain protein [Victivallis vadensis ATCC BAA-548] gi|281315895|gb|EFA99921.1| Radical SAM domain protein [Victivallis vadensis ATCC BAA-548] Length = 482 Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 36/225 (16%), Positives = 81/225 (36%), Gaps = 42/225 (18%) Query: 95 DRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIF 149 +R+L ++ +C C +C T L +E A + I++ +++ +V+ Sbjct: 21 NRLLSIEIEFNRLCNYRCPYC-----YAGDPETELPEMSSELADSVIRQAAELGARKVVI 75 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GG+PL+ L++ ++ + + +I ++ + V Sbjct: 76 LGGEPLLYP--ELERKIELVNSLGMGAEIFTNG--------ALLDEAAARMFAAHNCRVV 125 Query: 209 IAIHANHPY---------EFSEEAIAAISRLANAGI---ILLSQSVLLKGINDDPEILAN 256 + +++ P E E A A+ L AG + + SV+ +++ + + Sbjct: 126 VKLNSLDPAVQARMTGEPEALELAQRALRLLREAGCGAGRVAASSVI---CSENVDGMPA 182 Query: 257 LMRTFVELRIKPYYLHHPDLAAG----TSHFRLTIEEGQKIVASL 297 L R E I PY G H + +++ + Sbjct: 183 LWRYLREREILPY--FEMMTPQGRMLENRHLMVEPARLRQVFEEI 225 >gi|90416699|ref|ZP_01224629.1| molybdenum cofactor biosynthesis protein A [marine gamma proteobacterium HTCC2207] gi|90331452|gb|EAS46688.1| molybdenum cofactor biosynthesis protein A [marine gamma proteobacterium HTCC2207] Length = 336 Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 36/178 (20%), Positives = 73/178 (41%), Gaps = 21/178 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C +C EM K +LS ++ A E I ++ TGG+PLI Sbjct: 25 LSVTDRCNLRCTYCMAEEMTFLPKQQILSLEELRDAATAFVE-LGIRKIRLTGGEPLIRR 83 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE---AGKPVYI-AIHAN 214 + K++ +L + + L + + P + Q LK+ + + + ++ A Sbjct: 84 D--ILKLVSSLSALPGLDELTMTTNGL------LLPTMAQPLKDAGISRLNISVDSLKAE 135 Query: 215 HPYEFS--EEAIAAISRLANAGII----LLSQSVLLKGINDDPEILANLMRTFVELRI 266 + + + + + A + + +V+L G NDD + +L R V+ + Sbjct: 136 RFKQLTRVGDLSQVLEGIHAANAVGFGKIKLNAVILAGFNDD--EVIDLARFAVDNGM 191 >gi|308070036|ref|YP_003871641.1| molybdenum cofactor biosynthesis protein A [Paenibacillus polymyxa E681] gi|305859315|gb|ADM71103.1| Molybdenum cofactor biosynthesis protein A (narA protein) [Paenibacillus polymyxa E681] Length = 337 Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 37/178 (20%), Positives = 73/178 (41%), Gaps = 25/178 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C CR+C E+ G K +L+ ++ L+ I + ++ TGG+ Sbjct: 18 ISVIDRCNFRCRYCMPEEIFGHDYPFLPKEKILTFEEITR-LSRIFVSLGVTKLRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L ++ +L + V+ + + + P + L+EAG K V +++ Sbjct: 77 PLLRKD--LSLLIHSLTQLDGVEDIAMTTNG-VFLP-----KYAVALREAGLKRVTVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRT 260 N + + I A AG+ + V+ KG ND D +A+ + Sbjct: 129 SLDDDRFRQMNGGRSSVKAVLDGIEAAAQAGMQVKINMVVQKGFNDQDIVPMADYFQK 186 >gi|115376179|ref|ZP_01463422.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1] gi|115366829|gb|EAU65821.1| radical SAM domain protein [Stigmatella aurantiaca DW4/3-1] Length = 441 Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 34/182 (18%) Query: 86 LKGIVHRYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 L + +Y R + + C C++C V + ++ + + AL Sbjct: 40 LDLLALKYRTRAEQLAAFTGLHIFVVTLRCDHSCQYCQVSRQVEDRARFDMTREHADRAL 99 Query: 136 AYIQEKSQIW-EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRI 192 + + ++ F GG+PL L+ ++ V++ + + L+F V + R+ Sbjct: 100 DLVFQSPSPALKIEFQGGEPL-LNFGLIRHVVERALTLNQPLGRDLQF---VIATNLSRL 155 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEE------------AIAAISRLANAGIILLSQ 240 + E++ K+ G ++++ + P + I R A L Q Sbjct: 156 SEEMLAFCKQHG--IFLSTSLDGPEALHNAQRPVRGGNSHQRTVEGIRRAREA---LGDQ 210 Query: 241 SV 242 +V Sbjct: 211 AV 212 >gi|83589922|ref|YP_429931.1| hypothetical protein Moth_1074 [Moorella thermoacetica ATCC 39073] gi|123752930|sp|Q2RJK1|RIMO_MOOTA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|83572836|gb|ABC19388.1| SSU ribosomal protein S12P methylthiotransferase [Moorella thermoacetica ATCC 39073] Length = 432 Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 11/127 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGG 152 LK+ C C +C + G + L EA + ++ + G Sbjct: 143 AYLKIAEGCNNRCTYCTIPSIKGPYRSRPLEKVVAEAVSLAARGIKELVLVAQDTTAYGL 202 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAI 211 D RL ++L+ L I+ ++ +R P RI PELI+ + E G Y+ + Sbjct: 203 DCY--GEYRLPELLRRLARIEGIEWVRL----LYAYPTRITPELIEVMATEPGVVPYLDL 256 Query: 212 HANHPYE 218 H E Sbjct: 257 PLQHASE 263 >gi|87312365|ref|ZP_01094457.1| molybdopterin cofactor synthesis protein A [Blastopirellula marina DSM 3645] gi|87284930|gb|EAQ76872.1| molybdopterin cofactor synthesis protein A [Blastopirellula marina DSM 3645] Length = 333 Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E V + + +L+ ++ E +A + + + TGG+PL+ Sbjct: 20 ISVTDRCNIRCFYCMPLENVQFKPRAELLTFEEIER-VARLAVSLGVRKFRLTGGEPLV- 77 Query: 158 SHKRLQKVLKTLRYIKHVQIL 178 +L ++++ L I V+ L Sbjct: 78 -RAQLHELIQRLAAIPGVEDL 97 >gi|228948475|ref|ZP_04110757.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228811234|gb|EEM57573.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 339 Score = 43.9 bits (103), Expect = 0.038, Method: Composition-based stats. Identities = 31/166 (18%), Positives = 58/166 (34%), Gaps = 24/166 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMND 176 >gi|330815962|ref|YP_004359667.1| Molybdenum cofactor biosynthesis protein A [Burkholderia gladioli BSR3] gi|327368355|gb|AEA59711.1| Molybdenum cofactor biosynthesis protein A [Burkholderia gladioli BSR3] Length = 370 Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 67/197 (34%), Gaps = 47/197 (23%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C RE+ +LS ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPREVFDKDYPFLPHSALLSLEELERTARIFVAH-GVEKIRITGGE 99 Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191 PL+ K L+ +++ L ++ V + LR +RV + Sbjct: 100 PLL--RKNLEFLIERLARMETVDGRPLDLTLTTNGSLLARKARSLRDAGLTRVTVSL-DA 156 Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDD 250 ++ L + + N S + + I +AG L V+ +G ND Sbjct: 157 LDDTLFRRM-------------NDADFASADVLEGIFAAQDAGLAPLKVNMVVKRGTND- 202 Query: 251 PEILANLMRTFVELRIK 267 + + R F + Sbjct: 203 -AEIVPMARRFRNTGVV 218 >gi|301059397|ref|ZP_07200319.1| radical SAM domain protein [delta proteobacterium NaphS2] gi|300446478|gb|EFK10321.1| radical SAM domain protein [delta proteobacterium NaphS2] Length = 453 Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 64/185 (34%), Gaps = 18/185 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L CP C +C + + + ++ + Y K I + F L+ Sbjct: 210 VCLMTSTGCPYSCHYCA-SHFLFPEF-VQRNPEEISEEILYWHNKWGIRDFSFYDDALLV 267 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIHA 213 S K + +L+ + H +RFH+ I + I + L + G + Sbjct: 268 SSDKHMAVLLERIA--DHNLNIRFHTPNAIHVKE-ITKSIALRLHQTGFQTIRLGLETSD 324 Query: 214 NHPY-EFS-----EEAIAAISRLANAGIILLSQ-SV-LLKGI-NDDPEILANLMRTFVEL 264 NH + A+ L NAG +Q V ++ G+ P+ +A + Sbjct: 325 NHKRWHLDKKISQGDFAHAMDHLRNAGFH-PNQIGVYIMVGLPEQSPDAVAETIHHADRW 383 Query: 265 RIKPY 269 PY Sbjct: 384 GGIPY 388 >gi|295090679|emb|CBK76786.1| Fe-S oxidoreductase [Clostridium cf. saccharolyticum K10] Length = 290 Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 67/169 (39%), Gaps = 27/169 (15%) Query: 87 KGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 +GIV+R P ++++ C C FC M ++ V S + L + Sbjct: 4 EGIVYRPPSEARSLIVQVTIGCAHNTCTFC---NMYKAKDFRVRSMDEIMEDLR--EAHD 58 Query: 143 Q----IWEVIFTGGDPLILSHKRLQKVLKTLRYI-KH-VQILRFHSRVPIVDPQRINPEL 196 + +V GD L+L ++L +L +R + + V++ + + I+ R + E Sbjct: 59 GYGAYVQKVFLADGDALVLQTEKLLAILDAVRELFPNCVRVASYGTAQDIL---RKSEEE 115 Query: 197 IQCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGII 236 ++ LKEAG + + E + E A +L GI Sbjct: 116 LRQLKEAGLGIVYVGAESGDDEILREINKGVTARELKEAGQKLKRCGIQ 164 >gi|226311621|ref|YP_002771515.1| hypothetical protein BBR47_20340 [Brevibacillus brevis NBRC 100599] gi|226094569|dbj|BAH43011.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 452 Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 54/141 (38%), Gaps = 15/141 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149 R LK+ C +C FC G + S + + + Y++ Sbjct: 143 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRKPESVVEQAQKLVEAGYLEIVLTGIHTGG 202 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 G D L L K+L L ++ ++ +R S ++ +I E+I+ + + + V Sbjct: 203 YGED---LEDYNLAKLLIDLHQVEGLKRIRISS----IEASQITDEVIEVINNSDR-VVR 254 Query: 210 AIHANHPYEF-SEEAIAAISR 229 +H P + +E + + R Sbjct: 255 HLHV--PLQAGDDEVLKRMRR 273 >gi|222150403|ref|YP_002559556.1| molybdenum cofactor biosynthesis protein MoaA homolog [Macrococcus caseolyticus JCSC5402] gi|222119525|dbj|BAH16860.1| molybdenum cofactor biosynthesis protein MoaA homolog [Macrococcus caseolyticus JCSC5402] Length = 336 Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 40/85 (47%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G K +LS ++ +A + + + +V TGG+ Sbjct: 17 ISVTDRCNFRCTYCMPKEIFGDDYVFLPKDELLSFEELTR-IAKVYAQLGVKKVRITGGE 75 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ L +++ + I+ ++ + Sbjct: 76 PLLRRD--LPDLIREIHAIEGIEDI 98 >gi|221211776|ref|ZP_03584754.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans CGD1] gi|221167861|gb|EEE00330.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans CGD1] Length = 367 Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 45/195 (23%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154 L ++ C C +C RE+ GS + + A L I + ++ TGG+P Sbjct: 39 LSVIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLGRIARAFVSLGVEKIRITGGEP 98 Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192 L+ + L+ +++ L + V + LR +RV + + Sbjct: 99 LL--RRHLETLIERLAALTTVDGRPVELALTTNGALLAAKARTLRDAGLTRVTVSL-DAL 155 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251 + + + + +A PV + A I AG + +V+ +G NDD Sbjct: 156 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGANDD- 201 Query: 252 EILANLMRTFVELRI 266 + L+R F + Sbjct: 202 -QILPLVRHFRHTGV 215 >gi|83590678|ref|YP_430687.1| hypothetical protein Moth_1844 [Moorella thermoacetica ATCC 39073] gi|83573592|gb|ABC20144.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073] Length = 360 Score = 43.9 bits (103), Expect = 0.039, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 30/134 (22%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160 ++C CRFC + G +G +LS ++ A + +++ GG + Sbjct: 60 TNICVNACRFCAFYRLPGDPEGYLLSREEIGRKIEATLAAGG--TQILMQGG---LHPDL 114 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220 L +IK + HS P+ E+ ++ G PV Sbjct: 115 DLAWFEDLFSWIKSRYPVTLHSLSPV--------EIDDLARKEGLPVI------------ 154 Query: 221 EEAIAAISRLANAG 234 + RL AG Sbjct: 155 ----EVLRRLKKAG 164 >gi|206900889|ref|YP_002250798.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dictyoglomus thermophilum H-6-12] gi|229890516|sp|B5YE40|MIAB_DICT6 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|206739992|gb|ACI19050.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Dictyoglomus thermophilum H-6-12] Length = 440 Score = 43.9 bits (103), Expect = 0.040, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 15/108 (13%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GGDPLIL 157 C +C +C + G +K ++ + Y+ + + + G D L Sbjct: 154 GCNNFCTYCIVPYLRGREKSR--DPEEIIREVEYLASQGVVEVTLLGQNVDSYGKD---L 208 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + L +L + I ++ +RF + P+ ++ +LI+ + K Sbjct: 209 GNVDLADLLVEIHRIPRIKRIRFLTSH----PRDVSDKLIRVVATHPK 252 >gi|75760857|ref|ZP_00740872.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228967829|ref|ZP_04128843.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar sotto str. T04001] gi|74491671|gb|EAO54872.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228791879|gb|EEM39467.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar sotto str. T04001] Length = 339 Score = 43.9 bits (103), Expect = 0.040, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E LA + + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDIFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177 >gi|317500218|ref|ZP_07958449.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae bacterium 8_1_57FAA] gi|316898389|gb|EFV20429.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Lachnospiraceae bacterium 8_1_57FAA] Length = 483 Score = 43.9 bits (103), Expect = 0.040, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 66/158 (41%), Gaps = 32/158 (20%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + I + D I ++ S +YP + + ++ C +C +C + Sbjct: 167 MVIDIWKDTDKIVEDLPS-----ERKYPFKSGVNIMFGCNNFCSYC-----IVPYVRGRE 216 Query: 127 SSKDTEAALAYIQEKSQ--IWEVIFTGGD----------PLILSHKRLQKVLKTLRYIKH 174 S+D +A + I+ ++ + EV+ G + P+ ++L+ + I Sbjct: 217 RSRDPKAIIREIERLAEDGVVEVMLLGQNVNSYGKTLEHPMTF-----AQLLREIEKIDK 271 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 ++ +RF + P+ ++ ELI+ + ++ K + +H Sbjct: 272 IERIRFMTSH----PKDLSDELIEVMAQS-KKICRHLH 304 >gi|291087073|ref|ZP_06345323.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1] gi|291076389|gb|EFE13753.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1] Length = 452 Score = 43.9 bits (103), Expect = 0.040, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAY-------IQEKS 142 R +K+ C +C +C R + V+ + AA Y I S Sbjct: 151 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRSMEDVVQEVEALAASGYKEIVLTGIHLSS 210 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + T +P + L ++ L I ++ +R S ++P+ I E + L Sbjct: 211 YGADFKRTAENPEAAAD--LLSLIVRLDRIPGIERIRLGS----LEPRIITDEFAETLA 263 >gi|167644029|ref|YP_001681692.1| molybdenum cofactor biosynthesis protein A [Caulobacter sp. K31] gi|167346459|gb|ABZ69194.1| molybdenum cofactor biosynthesis protein A [Caulobacter sp. K31] Length = 348 Score = 43.9 bits (103), Expect = 0.040, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 63/181 (34%), Gaps = 39/181 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-- 156 + + C + C +C M K VLS ++ + + + ++ TGG+PL+ Sbjct: 35 VSVTDRCDLRCTYCMAEHMTFLPKAEVLSLEELDRLASTFVG-LGVRKLRLTGGEPLVRK 93 Query: 157 ------------LSHKRLQKVL-----KTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQ 198 L+ L ++ L H L R + V + P+L + Sbjct: 94 GIMTLVERLSRHLATGALDELTLTTNGTQLAQ--HASDLARLGVKRINVSLDTLKPDLFR 151 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 L G + +A I AGI + +V L+ D+ E L L+ Sbjct: 152 KLTRGGD--------------LSKVLAGIDAALAAGIQVKINAVALRH--DNAEELPALI 195 Query: 259 R 259 + Sbjct: 196 Q 196 >gi|296331887|ref|ZP_06874352.1| putative Fe-S oxidoreductase, radical SAM superfamily protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673499|ref|YP_003865171.1| putative Fe-S oxidoreductase, radical SAM superfamily protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296150965|gb|EFG91849.1| putative Fe-S oxidoreductase, radical SAM superfamily protein [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411743|gb|ADM36862.1| putative Fe-S oxidoreductase, radical SAM superfamily protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 373 Score = 43.9 bits (103), Expect = 0.041, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 16/119 (13%) Query: 62 PQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 P E + + D GD + ++ +C + C C + Sbjct: 9 PITPEFDPWEAYMDVDQYGDMQLTNVE-----------FTTTTLCNMRCEHCAVGYTLQP 57 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + L + L ++E ++ + TGG+P +LS K +++ + L H + +R Sbjct: 58 KDPNALP---IDLLLKRLEEIPRLRSISITGGEP-MLSLKSVKEYVVPLLKYAHERGVR 112 >gi|289427369|ref|ZP_06429082.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium acnes J165] gi|295129634|ref|YP_003580297.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium acnes SK137] gi|289159299|gb|EFD07490.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium acnes J165] gi|291375565|gb|ADD99419.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium acnes SK137] gi|332674504|gb|AEE71320.1| conserved radical SAM superfamily protein [Propionibacterium acnes 266] Length = 364 Score = 43.9 bits (103), Expect = 0.041, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 17/159 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 RY ++L C + C +C+RR+ G + ++ + ++ Q V G Sbjct: 4 RY---LVLWPTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEGVRTTGQPAHVQLAG 60 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKEAGKPVYI 209 G+P L ++ V K + I R+ + + R++ ++I LK V + Sbjct: 61 GEP-TLVPSLIEHVAKRVVEI------RWGKVTCGIQTNAARLDGDIIAMLKRHSVRVGV 113 Query: 210 AIHANHP-YEFSEEAIAA----ISRLANAGIILLSQSVL 243 ++ P +E + + A + LA+A I + +VL Sbjct: 114 SVDGPPPVHEKTRGSAAQTFRGLLALAHADIPVRVTTVL 152 >gi|312793341|ref|YP_004026264.1| Radical SAM domain-containing protein [Caldicellulosiruptor kristjanssonii 177R1B] gi|312180481|gb|ADQ40651.1| Radical SAM domain protein [Caldicellulosiruptor kristjanssonii 177R1B] Length = 341 Score = 43.9 bits (103), Expect = 0.041, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + CP C FC ++ + G ++ + E L I + E+ + GG+ Sbjct: 8 IFIPQYACPFNCIFCNQKTISGEKEEVSFDRIKRQIEQGLK-INPDEDV-ELAYYGGNFT 65 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214 + +K+L+ + ++ +R +R P I+ E ++ LK K + + I Sbjct: 66 AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLRLLKLYNVKTIELGI--- 117 Query: 215 HPYEFSEEAIAAISR 229 ++ + A +R Sbjct: 118 --QSMFDDVLNACAR 130 >gi|237750753|ref|ZP_04581233.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] gi|229373843|gb|EEO24234.1| conserved hypothetical protein [Helicobacter bilis ATCC 43879] Length = 412 Score = 43.9 bits (103), Expect = 0.041, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 51/126 (40%), Gaps = 10/126 (7%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153 R +K+ C C +C + GS S + I E+S + EVI TG + Sbjct: 115 RAFIKIQEGCNFACSYCIIPSVRGS--ARSFSEAHILDQIK-ILEQSGVTEVILTGTNIG 171 Query: 154 PLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 L K + +++ + I + +R S ++P +I+ ++ L+ ++ I Sbjct: 172 SYGLDTKTHIATLIQKIHDISGILRIRLGS----LEPSQIDSAFLEILELNKLERHLHIA 227 Query: 213 ANHPYE 218 H E Sbjct: 228 LQHTSE 233 >gi|221317881|ref|ZP_03599175.1| YfkA [Bacillus subtilis subsp. subtilis str. JH642] gi|221322154|ref|ZP_03603448.1| YfkA [Bacillus subtilis subsp. subtilis str. SMY] gi|255767189|ref|NP_388677.2| Fe-S oxidoreductase, radical SAM superfamily [Bacillus subtilis subsp. subtilis str. 168] gi|321314524|ref|YP_004206811.1| putative Fe-S oxidoreductase, radical SAM superfamily protein [Bacillus subtilis BSn5] gi|261278024|sp|O34400|YFKA_BACSU RecName: Full=Putative protein yfkA gi|225184816|emb|CAB12625.2| putative Fe-S oxidoreductase, radical SAM superfamily [Bacillus subtilis subsp. subtilis str. 168] gi|291483237|dbj|BAI84312.1| hypothetical protein BSNT_01329 [Bacillus subtilis subsp. natto BEST195] gi|320020798|gb|ADV95784.1| putative Fe-S oxidoreductase, radical SAM superfamily protein [Bacillus subtilis BSn5] Length = 373 Score = 43.9 bits (103), Expect = 0.041, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 28/157 (17%) Query: 62 PQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 P E + + D GD + ++ +C + C C + Sbjct: 9 PITPEFDPWEAYMDVDQYGDMQLTNVE-----------FTTTTLCNMRCEHCAVGYTLQP 57 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + L + L ++E ++ + TGG+P +LS K +++ + L H + +R Sbjct: 58 KDPNALP---IDLLLKRLEEIPRLRSISITGGEP-MLSLKSVKEYVVPLLKYAHERGVR- 112 Query: 181 HSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215 +IN L ++ P +H +H Sbjct: 113 ---------TQINSNLTLDIERYEWIIPYLDVLHISH 140 >gi|146282949|ref|YP_001173102.1| oxygen-independent coproporphyrinogen III oxidase, putative [Pseudomonas stutzeri A1501] gi|145571154|gb|ABP80260.1| oxygen-independent coproporphyrinogen III oxidase, putative [Pseudomonas stutzeri A1501] Length = 298 Score = 43.9 bits (103), Expect = 0.041, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 9/87 (10%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152 ++L + + C C FC EM + + + + E L I+ + + V G Sbjct: 24 LILPVTNGCSWNACTFC---EMYTAPQKKFRARDEVE-VLEEIRRCGEQLIVQRVFLADG 79 Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178 D L+L +RL K+L+ +R + VQ + Sbjct: 80 DALVLPTRRLLKILEQIRQCLPEVQRV 106 >gi|50841594|ref|YP_054821.1| radical SAM superfamily protein [Propionibacterium acnes KPA171202] gi|289424485|ref|ZP_06426268.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium acnes SK187] gi|50839196|gb|AAT81863.1| conserved radical SAM superfamily protein [Propionibacterium acnes KPA171202] gi|289155182|gb|EFD03864.1| putative bacteriochlorophyll 4-vinyl reductase [Propionibacterium acnes SK187] Length = 364 Score = 43.6 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 66/159 (41%), Gaps = 17/159 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 RY ++L C + C +C+RR+ G + ++ + ++ Q V G Sbjct: 4 RY---LVLWPTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEGVRTTGQPAHVQLAG 60 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKEAGKPVYI 209 G+P L ++ V K + I R+ + + R++ ++I LK V + Sbjct: 61 GEP-TLVPSLIEHVAKRVVEI------RWGKVTCGIQTNAARLDGDIIAMLKRHSVRVGV 113 Query: 210 AIHANHP-YEFSEEAIAA----ISRLANAGIILLSQSVL 243 ++ P +E + + A + LA+A I + +VL Sbjct: 114 SVDGPPPVHEKTRGSAAQTFRGLLALAHADIPVRVTTVL 152 >gi|2626813|dbj|BAA23391.1| YfkA [Bacillus subtilis] Length = 154 Score = 43.6 bits (102), Expect = 0.041, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 55/157 (35%), Gaps = 28/157 (17%) Query: 62 PQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 P E + + D GD + ++ +C + C C + Sbjct: 9 PITPEFDPWEAYMDVDQYGDMQLTNVE-----------FTTTTLCNMRCEHCAVGYTLQP 57 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + L + L ++E ++ + TGG+P +LS K +++ + L H + +R Sbjct: 58 KDPNALP---IDLLLKRLEEIPRLRSISITGGEP-MLSLKSVKEYVVPLLKYAHERGVR- 112 Query: 181 HSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215 +IN L ++ P +H +H Sbjct: 113 ---------TQINSNLTLDIERYEWIIPYLDVLHISH 140 >gi|315925688|ref|ZP_07921897.1| radical SAM protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315621006|gb|EFV00978.1| radical SAM protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 408 Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 55/160 (34%), Gaps = 37/160 (23%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R P + + + C C CFR K LS K+ E + + V TG Sbjct: 80 RIPIQADIVVTGKCHCNCWHCFR----IKDKREDLSLKEIERVMGELYALGTAT-VGITG 134 Query: 152 GDPLILSHKRLQKVLK--------TLRYIKHVQILRFH--------SRVPIVDPQRINPE 195 G+P++ ++ +LK L H F +RV + + Sbjct: 135 GEPMLRED--IRDILKLIPEGMEGQLYTTGHQIDKNFAEFIQSTNVTRVIVSL-DHYLED 191 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI 235 ++ H H YE EA+ AI L ++G+ Sbjct: 192 AANAMR----------HYGHAYE---EAVKAIQCLVSSGV 218 >gi|229148819|ref|ZP_04277067.1| dehydrogenase [Bacillus cereus m1550] gi|228634613|gb|EEK91194.1| dehydrogenase [Bacillus cereus m1550] Length = 375 Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|225028525|ref|ZP_03717717.1| hypothetical protein EUBHAL_02804 [Eubacterium hallii DSM 3353] gi|224954168|gb|EEG35377.1| hypothetical protein EUBHAL_02804 [Eubacterium hallii DSM 3353] Length = 450 Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 49/131 (37%), Gaps = 28/131 (21%) Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R +K+ C +C +C R + V+ AA Y E++ Sbjct: 150 HTRAYIKIQDGCNQFCSYCIIPYTRGRIRSKNPEEVIEEVKNLAAQGY-------KEIVL 202 Query: 150 TG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 TG D L L V+K ++ ++ V+ +R S ++P+ I E ++ L + Sbjct: 203 TGIHLSSYGKD---LGTVTLLDVIKRIQQVEDVERIRLGS----LEPRIITEEFVKELVK 255 Query: 203 AGKPVYIAIHA 213 K + H Sbjct: 256 CDK---VCPHF 263 >gi|152996920|ref|YP_001341755.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinomonas sp. MWYL1] gi|229890562|sp|A6VZE1|MIAB_MARMS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|150837844|gb|ABR71820.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Marinomonas sp. MWYL1] Length = 451 Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 43/122 (35%), Gaps = 13/122 (10%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFT 150 + ++ C YC FC R E V ++L + E + I V Sbjct: 148 AFVSIMEGCSKYCTFCVVPYTRGEEVSRPFDSILKEVVQLAEQGVREI--HLLGQNVNAY 205 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD L ++ + I V+ +RF + P+ + LI+ + K + Sbjct: 206 RGDTAEGDEADLADIIHAVAQIDGVERIRFTTSHPV----EFSDSLIEAFRNEPK-LVSH 260 Query: 211 IH 212 +H Sbjct: 261 LH 262 >gi|307266180|ref|ZP_07547723.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter wiegelii Rt8.B1] gi|306918784|gb|EFN49015.1| molybdenum cofactor biosynthesis protein A [Thermoanaerobacter wiegelii Rt8.B1] Length = 317 Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 74/166 (44%), Gaps = 26/166 (15%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E + +L +++ + I + I +V FTGG+PL+ Sbjct: 14 VSVTDRCNLRCIYCMPEEGIPKKDHNEILRNEEILKIIR-ISAELGIKKVRFTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213 K ++ ++ IK ++ + +++ E+ LKEAG K V I++ + Sbjct: 72 -RKGIENIIYETSKIKGIEDIALTTNGTKL---------YEMADTLKEAGLKRVNISLDS 121 Query: 214 ---NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 + + ++ AI + + G+ + +V++K INDD Sbjct: 122 LKKDRYRMITRLGNIDDVFRAIDKSLSIGLEPVKINTVVIKSINDD 167 >gi|228906226|ref|ZP_04070113.1| dehydrogenase [Bacillus thuringiensis IBL 200] gi|228853382|gb|EEM98152.1| dehydrogenase [Bacillus thuringiensis IBL 200] Length = 375 Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|30018672|ref|NP_830303.1| thioredoxin-like oxidoreductase [Bacillus cereus ATCC 14579] gi|228956898|ref|ZP_04118679.1| dehydrogenase [Bacillus thuringiensis serovar pakistani str. T13001] gi|229108087|ref|ZP_04237712.1| dehydrogenase [Bacillus cereus Rock1-15] gi|229125914|ref|ZP_04254939.1| dehydrogenase [Bacillus cereus BDRD-Cer4] gi|229143207|ref|ZP_04271639.1| dehydrogenase [Bacillus cereus BDRD-ST24] gi|296501246|ref|YP_003662946.1| thioredoxin-like oxidoreductase [Bacillus thuringiensis BMB171] gi|29894213|gb|AAP07504.1| Thioredoxin-like oxidoreductases [Bacillus cereus ATCC 14579] gi|228640288|gb|EEK96686.1| dehydrogenase [Bacillus cereus BDRD-ST24] gi|228657572|gb|EEL13385.1| dehydrogenase [Bacillus cereus BDRD-Cer4] gi|228675362|gb|EEL30581.1| dehydrogenase [Bacillus cereus Rock1-15] gi|228802741|gb|EEM49577.1| dehydrogenase [Bacillus thuringiensis serovar pakistani str. T13001] gi|296322298|gb|ADH05226.1| thioredoxin-like oxidoreductase [Bacillus thuringiensis BMB171] Length = 375 Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|322383639|ref|ZP_08057390.1| ribosomal protein S12 methylthiotransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321151851|gb|EFX44794.1| ribosomal protein S12 methylthiotransferase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 446 Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C FC G + S + A ++ + E++ T Sbjct: 139 RTRAFLKIQEGCNNFCTFCIIPWSRGLMRSRDPKSV-VQQA--HMLVDAGYKEIVLTGIH 195 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 G D + L K+L L + ++ +R S ++ +I E+++ L + K Sbjct: 196 TGGYGED---MEDYSLAKLLWDLDKVDGLERIRISS----IEASQITDEVLEVLNASDK- 247 Query: 207 VYIAIHA 213 + +H Sbjct: 248 MCRHLHI 254 >gi|42779617|ref|NP_976864.1| hypothetical protein BCE_0537 [Bacillus cereus ATCC 10987] gi|206974237|ref|ZP_03235154.1| conserved hypothetical protein [Bacillus cereus H3081.97] gi|217958018|ref|YP_002336562.1| hypothetical protein BCAH187_A0537 [Bacillus cereus AH187] gi|222094217|ref|YP_002528274.1| thioredoxin-like oxidoreductase [Bacillus cereus Q1] gi|229137284|ref|ZP_04265900.1| dehydrogenase [Bacillus cereus BDRD-ST26] gi|229194799|ref|ZP_04321586.1| dehydrogenase [Bacillus cereus m1293] gi|42735533|gb|AAS39472.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] gi|206747477|gb|EDZ58867.1| conserved hypothetical protein [Bacillus cereus H3081.97] gi|217065915|gb|ACJ80165.1| conserved hypothetical protein [Bacillus cereus AH187] gi|221238272|gb|ACM10982.1| thioredoxin-like oxidoreductase [Bacillus cereus Q1] gi|228588647|gb|EEK46678.1| dehydrogenase [Bacillus cereus m1293] gi|228646187|gb|EEL02405.1| dehydrogenase [Bacillus cereus BDRD-ST26] gi|324324522|gb|ADY19782.1| thioredoxin-like oxidoreductase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 375 Score = 43.6 bits (102), Expect = 0.042, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|226950381|ref|YP_002805472.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str. Kyoto] gi|226843573|gb|ACO86239.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str. Kyoto] Length = 432 Score = 43.6 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%) Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145 + Y D R LK+ C +C +C ++ +G V S K + + + Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189 Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 E+I +G D L +L+ + ++ ++ +R S +DP E I + Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245 Query: 201 KEAGKPVYIAIHA 213 + + H Sbjct: 246 SKLKR---FCPHF 255 >gi|218899882|ref|YP_002448293.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842] gi|218545891|gb|ACK98285.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus G9842] Length = 337 Score = 43.6 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 24/166 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E LA + + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 + N ++ I I AG+ + V+ KG+ND Sbjct: 129 AIDDDIFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMND 174 >gi|148380907|ref|YP_001255448.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str. ATCC 3502] gi|153931336|ref|YP_001385215.1| RNA modification protein [Clostridium botulinum A str. ATCC 19397] gi|153937595|ref|YP_001388684.1| RNA modification protein [Clostridium botulinum A str. Hall] gi|148290391|emb|CAL84518.1| putative radical SAM superfamily protein [Clostridium botulinum A str. ATCC 3502] gi|152927380|gb|ABS32880.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str. ATCC 19397] gi|152933509|gb|ABS39008.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str. Hall] Length = 432 Score = 43.6 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%) Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145 + Y D R LK+ C +C +C ++ +G V S K + + + Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189 Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 E+I +G D L +L+ + ++ ++ +R S +DP E I + Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245 Query: 201 KEAGKPVYIAIHA 213 + + H Sbjct: 246 SKLKR---FCPHF 255 >gi|16080723|ref|NP_391551.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis subsp. subtilis str. 168] gi|221311629|ref|ZP_03593476.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis subsp. subtilis str. 168] gi|221315956|ref|ZP_03597761.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221320868|ref|ZP_03602162.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis subsp. subtilis str. JH642] gi|221325153|ref|ZP_03606447.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis subsp. subtilis str. SMY] gi|730103|sp|P39757|MOAA_BACSU RecName: Full=Molybdenum cofactor biosynthesis protein A; Short=Protein narA gi|516272|emb|CAA84540.1| unknown [Bacillus subtilis subsp. subtilis str. 168] gi|1648856|emb|CAB03683.1| MoaA-like protein [Bacillus subtilis subsp. subtilis str. 168] gi|2636195|emb|CAB15687.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis subsp. subtilis str. 168] Length = 341 Score = 43.6 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 33/170 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C E+ G K +LS ++ E + + ++ TGG+ Sbjct: 21 ISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGE 80 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP-------QRINPEL----IQC 199 PL+ + +++K L I ++ + S +P+ +R+ L + Sbjct: 81 PLMRKD--MPELIKKLARIPGIRDIAMTTNGSLLPVYAKRLKEAGLKRVTISLDSLEDER 138 Query: 200 LKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 K+ G+ V ++ + + I AG+ + V+ KG+N Sbjct: 139 FKKINGRGVSVS-----------KVLEGIEAAKQAGLGVKINMVVQKGVN 177 >gi|321313219|ref|YP_004205506.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis BSn5] gi|320019493|gb|ADV94479.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis BSn5] Length = 341 Score = 43.6 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 33/170 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C E+ G K +LS ++ E + + ++ TGG+ Sbjct: 21 ISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGE 80 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP-------QRINPEL----IQC 199 PL+ + +++K L I ++ + S +P+ +R+ L + Sbjct: 81 PLMRKD--MPELIKKLARIPGIRDIAMTTNGSLLPVYAKRLKEAGLKRVTISLDSLEDER 138 Query: 200 LKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 K+ G+ V ++ + + I AG+ + V+ KG+N Sbjct: 139 FKKINGRGVSVS-----------KVLEGIEAAKQAGLGVKINMVVQKGVN 177 >gi|254736837|ref|ZP_05194543.1| molybdenum cofactor biosynthesis protein A [Bacillus anthracis str. Western North America USA6153] Length = 247 Score = 43.6 bits (102), Expect = 0.043, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 26 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 84 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 85 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 136 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 137 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 183 >gi|291486249|dbj|BAI87324.1| molybdenum cofactor biosynthesis protein A [Bacillus subtilis subsp. natto BEST195] Length = 341 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 66/170 (38%), Gaps = 33/170 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C E+ G K +LS ++ E + + ++ TGG+ Sbjct: 21 ISVTDRCNFRCTYCMPAELFGPDYPFLKKEELLSFEELERLATLFVTRFGVEKIRLTGGE 80 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP-------QRINPEL----IQC 199 PL+ + +++K L I ++ + S +P+ +R+ L + Sbjct: 81 PLMRKD--MPELIKKLARIPGIRDIAMTTNGSLLPVYAKRLKEAGLKRVTISLDSLEDER 138 Query: 200 LKE-AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 K+ G+ V ++ + + I AG+ + V+ KG+N Sbjct: 139 FKKINGRGVSVS-----------KVLEGIEAAKQAGLGVKINMVVQKGVN 177 >gi|254456428|ref|ZP_05069857.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Pelagibacter sp. HTCC7211] gi|207083430|gb|EDZ60856.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Candidatus Pelagibacter sp. HTCC7211] Length = 442 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 19/116 (16%), Positives = 43/116 (37%), Gaps = 13/116 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA---YIQEKSQIWEVIF-TGGDP 154 L + C +C FC V S+ E L Y+ + V+ + Sbjct: 152 LTIQEGCDKFCHFC-----VVPYTRGPEYSRPLEQILDEAKYLADNGAQEIVLLGQNVNA 206 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 +L ++ + I ++ +R+ + P+ ++ +LI+ K + K + + Sbjct: 207 YSYEQNKLSNLIFEIEKIPQIKRIRYTTSH----PKDMSDDLIKVYKSSKKLMPLV 258 >gi|52144823|ref|YP_082004.1| moaA/nifB/pqqE family protein [Bacillus cereus E33L] gi|300119045|ref|ZP_07056756.1| moaA/nifB/pqqE family protein [Bacillus cereus SJ1] gi|51978292|gb|AAU19842.1| probable moaA/nifB/pqqE family protein [Bacillus cereus E33L] gi|298723661|gb|EFI64392.1| moaA/nifB/pqqE family protein [Bacillus cereus SJ1] Length = 375 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|330503695|ref|YP_004380564.1| putative radical SAM protein [Pseudomonas mendocina NK-01] gi|328917981|gb|AEB58812.1| putative radical SAM protein [Pseudomonas mendocina NK-01] Length = 496 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 12/98 (12%) Query: 83 HSPLKGIVHRYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 H+PL + +Y R L + C CR+C G +S++ E Sbjct: 77 HNPLPEMAAQYRSRKSFVFGGPALHLFVVTLRCNHSCRYCQVSRAPLGGAGHDMSAEHAE 136 Query: 133 AALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTL 169 A+ + E + V F GG+PL L+ R+++V++ + Sbjct: 137 YAVERLFESPSPVLTVEFQGGEPL-LAFNRIRQVVEAV 173 >gi|229028271|ref|ZP_04184407.1| dehydrogenase [Bacillus cereus AH1271] gi|228733035|gb|EEL83881.1| dehydrogenase [Bacillus cereus AH1271] Length = 375 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|229048433|ref|ZP_04194000.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676] gi|229130005|ref|ZP_04258969.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-Cer4] gi|229147295|ref|ZP_04275646.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-ST24] gi|228636196|gb|EEK92675.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-ST24] gi|228653449|gb|EEL09323.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus BDRD-Cer4] gi|228722948|gb|EEL74326.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH676] Length = 339 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ GS +L+ + E LA + + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEIFGSDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAV-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177 >gi|229152925|ref|ZP_04281107.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1550] gi|228630538|gb|EEK87185.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1550] Length = 339 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E LA + + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAV-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177 >gi|218233618|ref|YP_002369523.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264] gi|218161575|gb|ACK61567.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus B4264] Length = 337 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 62/167 (37%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E LA + + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEIFGPDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAV-----HLTKQ-AKALKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 129 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 175 >gi|218231727|ref|YP_002365264.1| hypothetical protein BCB4264_A0486 [Bacillus cereus B4264] gi|218159684|gb|ACK59676.1| conserved hypothetical protein [Bacillus cereus B4264] Length = 375 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|206967566|ref|ZP_03228522.1| conserved hypothetical protein [Bacillus cereus AH1134] gi|228919345|ref|ZP_04082714.1| dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|229068169|ref|ZP_04201476.1| dehydrogenase [Bacillus cereus F65185] gi|229177006|ref|ZP_04304401.1| dehydrogenase [Bacillus cereus 172560W] gi|229188686|ref|ZP_04315725.1| dehydrogenase [Bacillus cereus ATCC 10876] gi|206736486|gb|EDZ53633.1| conserved hypothetical protein [Bacillus cereus AH1134] gi|228594875|gb|EEK52655.1| dehydrogenase [Bacillus cereus ATCC 10876] gi|228606481|gb|EEK63907.1| dehydrogenase [Bacillus cereus 172560W] gi|228714983|gb|EEL66851.1| dehydrogenase [Bacillus cereus F65185] gi|228840281|gb|EEM85553.1| dehydrogenase [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 375 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|160901857|ref|YP_001567438.1| molybdenum cofactor biosynthesis protein A [Petrotoga mobilis SJ95] gi|189028692|sp|A9BF51|MOAA_PETMO RecName: Full=Molybdenum cofactor biosynthesis protein A gi|160359501|gb|ABX31115.1| molybdenum cofactor biosynthesis protein A [Petrotoga mobilis SJ95] Length = 323 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 94/222 (42%), Gaps = 33/222 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C + V + + +L ++ + + + I +V TGG+PL+ Sbjct: 14 VSITDRCNLRCIYCMPPQGVTFKTHSSILRYEEIIKIVE-VGTELGIKKVRITGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216 + + ++K LR I ++ + + ++ LK AG V I++ + +P Sbjct: 72 -RQGVVNLIKELRKIPELEDITMTTNGVLLPKYAF------ALKRAGLSRVNISLDSLNP 124 Query: 217 ---YEFS--EEAIAAISRLANA---GI-ILLSQSVLLKGINDDP-------EILANLMRT 260 + E AI + A G+ + +V++KGIND+ I +L Sbjct: 125 DTYKTITRRGEFSQAIEGIKAALEVGLNPVKINTVVMKGINDNELENFVNLTIDKDLHVR 184 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKIS 302 F+E Y+ + + + ++ +++ E ++I+ + Sbjct: 185 FIE------YMPMGETSLLSGNYYVSLNEFKEIIIDKMGMVP 220 >gi|30022797|ref|NP_834428.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 14579] gi|296505191|ref|YP_003666891.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis BMB171] gi|29898356|gb|AAP11629.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 14579] gi|296326243|gb|ADH09171.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis BMB171] Length = 337 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ GS +L+ + E LA + + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEIFGSDYAFLKDEFLLTFDEIER-LAKLFVNIGVRKIRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAV-----HLTKQ-AKALKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 129 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 175 >gi|228950973|ref|ZP_04113094.1| dehydrogenase [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229077776|ref|ZP_04210403.1| dehydrogenase [Bacillus cereus Rock4-2] gi|228705504|gb|EEL57863.1| dehydrogenase [Bacillus cereus Rock4-2] gi|228808700|gb|EEM55198.1| dehydrogenase [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 375 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|218895539|ref|YP_002443950.1| hypothetical protein BCG9842_B4837 [Bacillus cereus G9842] gi|218541756|gb|ACK94150.1| conserved hypothetical protein [Bacillus cereus G9842] Length = 375 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|196034724|ref|ZP_03102132.1| conserved hypothetical protein [Bacillus cereus W] gi|228944235|ref|ZP_04106611.1| dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|195992767|gb|EDX56727.1| conserved hypothetical protein [Bacillus cereus W] gi|228815386|gb|EEM61631.1| dehydrogenase [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 375 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|167462198|ref|ZP_02327287.1| RNA modification enzyme, MiaB family protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 449 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C FC G + S + A ++ + E++ T Sbjct: 142 RTRAFLKIQEGCNNFCTFCIIPWSRGLMRSRDPKSV-VQQA--HMLVDAGYKEIVLTGIH 198 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 G D + L K+L L + ++ +R S ++ +I E+++ L + K Sbjct: 199 TGGYGED---MEDYSLAKLLWDLDKVDGLERIRISS----IEASQITDEVLEVLNASDK- 250 Query: 207 VYIAIHA 213 + +H Sbjct: 251 MCRHLHI 257 >gi|118476173|ref|YP_893324.1| radical SAM superfamily oxidoreductase [Bacillus thuringiensis str. Al Hakam] gi|225862462|ref|YP_002747840.1| oxidoreductase, radical SAM superfamily [Bacillus cereus 03BB102] gi|118415398|gb|ABK83817.1| oxidoreductase, radical SAM superfamily [Bacillus thuringiensis str. Al Hakam] gi|225788857|gb|ACO29074.1| oxidoreductase, radical SAM superfamily [Bacillus cereus 03BB102] Length = 375 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|75760084|ref|ZP_00740147.1| Thioredoxin-like oxidoreductases [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228977177|ref|ZP_04137576.1| dehydrogenase [Bacillus thuringiensis Bt407] gi|74492434|gb|EAO55587.1| Thioredoxin-like oxidoreductases [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228782486|gb|EEM30665.1| dehydrogenase [Bacillus thuringiensis Bt407] gi|326938204|gb|AEA14100.1| thioredoxin-like oxidoreductase [Bacillus thuringiensis serovar chinensis CT-43] Length = 375 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|47567247|ref|ZP_00237961.1| thioredoxin-like oxidoreductases [Bacillus cereus G9241] gi|228983679|ref|ZP_04143879.1| dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|229042322|ref|ZP_04190072.1| dehydrogenase [Bacillus cereus AH676] gi|47556090|gb|EAL14427.1| thioredoxin-like oxidoreductases [Bacillus cereus G9241] gi|228726981|gb|EEL78188.1| dehydrogenase [Bacillus cereus AH676] gi|228776031|gb|EEM24397.1| dehydrogenase [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 375 Score = 43.6 bits (102), Expect = 0.044, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|303233275|ref|ZP_07319947.1| ribosomal protein S12 methylthiotransferase RimO [Atopobium vaginae PB189-T1-4] gi|302480665|gb|EFL43753.1| ribosomal protein S12 methylthiotransferase RimO [Atopobium vaginae PB189-T1-4] Length = 532 Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 61/173 (35%), Gaps = 32/173 (18%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +K+ C C FC + G +D A + + + I E+I G D I Sbjct: 220 AFVKISEGCSRMCAFCAIPHIRGPY--ASRPPQDILAEVDML-VDAGIHEIILIGQDTGI 276 Query: 157 L-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210 K L +L+ + + HV+ + RV + P+ + PELI +++ + + YI Sbjct: 277 WGCDFKEPKTLAWLLQQVAH--HVRGKQCWIRVLYLQPEGMTPELISTIRDTPEVLPYID 334 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 I H E + R+ G + L L T Sbjct: 335 IPIQHCSE------QVLKRMGRTG---------------SAQELHELFATLRR 366 >gi|312200419|ref|YP_004020480.1| radical SAM domain protein [Frankia sp. EuI1c] gi|311231755|gb|ADP84610.1| Radical SAM domain protein [Frankia sp. EuI1c] Length = 428 Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 33/161 (20%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGT-------VLSSKDTEAALAYIQEKSQIW----- 145 +LK+ C + C +C+ V S + +S + E A+ I E ++ Sbjct: 55 ILKIHSRCNLACDYCY----VYSAADSGWRRQPPRMSRRTAEQAIRRIAEHTRTHGLSQV 110 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 E++ GG+PL+ + + LR I +R ++ V + L+ L E Sbjct: 111 EIVLHGGEPLLAGADFVGWLADELRRQIPPPVRVRIVTQTNGVA---LRAGLLDLLVERD 167 Query: 205 KPVYIA------IHANHPYEFS------EEAIAAISRLANA 233 V ++ H H F+ A+ L +A Sbjct: 168 IAVCVSLDGPSGAHDRH-RRFADGRRSYPRVREALELLTSA 207 >gi|182419316|ref|ZP_02950569.1| heme biosynthesis [Clostridium butyricum 5521] gi|237667748|ref|ZP_04527732.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182376956|gb|EDT74527.1| heme biosynthesis [Clostridium butyricum 5521] gi|237656096|gb|EEP53652.1| radical SAM domain protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 453 Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 31/125 (24%), Positives = 58/125 (46%), Gaps = 12/125 (9%) Query: 65 EELNILPE----EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +E+ L E ED + HS + Y I L ++H C + C++CF E Sbjct: 63 DEIQELAEDGILYSEDQYEEIAHSSMD--DRDYIKAICLNVIHGCNLRCKYCFADEGEYH 120 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIKH--V 175 G V+S + + A+ Y+ ++S E+ GG+P L ++++++K R + Sbjct: 121 GHGGVMSVETAKKAIDYVIKRSGPRKNIEIDLFGGEP-TLIMDKIKEIIKYARDNEEKWG 179 Query: 176 QILRF 180 + +RF Sbjct: 180 KRIRF 184 >gi|160940239|ref|ZP_02087584.1| hypothetical protein CLOBOL_05128 [Clostridium bolteae ATCC BAA-613] gi|158436819|gb|EDP14586.1| hypothetical protein CLOBOL_05128 [Clostridium bolteae ATCC BAA-613] Length = 472 Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 33/188 (17%), Positives = 65/188 (34%), Gaps = 41/188 (21%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ Y ++ + F G+ + L Sbjct: 85 LMSDYRSCSNKCIFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITL 131 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 ++ + + + +I+R + Q NP+L + L Sbjct: 132 TNMKERDI---------ERIIRMQLAPINISVQTTNPQLRCKMLN--------------- 167 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 F+ + + + L + + + Q V K +ND E+ + R P+ + Sbjct: 168 NRFAGDKLKYLQMLYDGHVEMNGQVVCCKNVNDGAELERTIRDL---SRYLPFLRSVSVV 224 Query: 277 AAGTSHFR 284 AG + FR Sbjct: 225 PAGITKFR 232 >gi|324328622|gb|ADY23882.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar finitimus YBT-020] Length = 337 Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E LA + + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIER-LARLFVSIGVRKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175 >gi|85859326|ref|YP_461528.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB] gi|85722417|gb|ABC77360.1| radical SAM superfamily [Syntrophus aciditrophicus SB] Length = 408 Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 40/200 (20%), Positives = 69/200 (34%), Gaps = 45/200 (22%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 YP + ++ C + C C L++ + + + I ++FTGG Sbjct: 60 YPGHPVWEVTRACNLSCIHC--HAKSSQAASDELTTAEGKRLIDQIASMPAFRTLVFTGG 117 Query: 153 DPLILSHKRLQKVLKT-----LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 +PL+ + ++L+ L I + I+ + + LK+ G V Sbjct: 118 EPLVRKD--IFELLRHSQKAGLANI------------LATNGTLIDDAMARKLKDHGV-V 162 Query: 208 YIAIHANHPYE-----------FSEEAIAAISRLANAGIIL--------LSQSV---LLK 245 AI + P E E A+ I AGI+L + V L+ Sbjct: 163 CNAISVDAPDETIHNYVRNSPRAFELALRGIEATKKAGILLQINTTAMEYNLPVLSELID 222 Query: 246 GINDDPEILANLMRTFVELR 265 IND + LM V + Sbjct: 223 FINDQGASVM-LMYQLVAVG 241 >gi|30260587|ref|NP_842964.1| hypothetical protein BA_0421 [Bacillus anthracis str. Ames] gi|47525697|ref|YP_017046.1| hypothetical protein GBAA_0421 [Bacillus anthracis str. 'Ames Ancestor'] gi|49183436|ref|YP_026688.1| hypothetical protein BAS0408 [Bacillus anthracis str. Sterne] gi|65317850|ref|ZP_00390809.1| COG0535: Predicted Fe-S oxidoreductases [Bacillus anthracis str. A2012] gi|170707171|ref|ZP_02897627.1| conserved hypothetical protein [Bacillus anthracis str. A0389] gi|229603544|ref|YP_002865034.1| hypothetical protein BAA_0486 [Bacillus anthracis str. A0248] gi|254762009|ref|ZP_05213858.1| hypothetical protein BantA9_26321 [Bacillus anthracis str. Australia 94] gi|30253955|gb|AAP24450.1| conserved hypothetical protein [Bacillus anthracis str. Ames] gi|47500845|gb|AAT29521.1| conserved hypothetical protein [Bacillus anthracis str. 'Ames Ancestor'] gi|49177363|gb|AAT52739.1| conserved hypothetical protein [Bacillus anthracis str. Sterne] gi|170127949|gb|EDS96820.1| conserved hypothetical protein [Bacillus anthracis str. A0389] gi|229267952|gb|ACQ49589.1| conserved hypothetical protein [Bacillus anthracis str. A0248] Length = 375 Score = 43.6 bits (102), Expect = 0.045, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + + P +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGV----------PTQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|257470893|ref|ZP_05634983.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans ATCC 49185] gi|317065094|ref|ZP_07929579.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans ATCC 49185] gi|313690770|gb|EFS27605.1| molybdenum cofactor biosynthesis protein A [Fusobacterium ulcerans ATCC 49185] Length = 324 Score = 43.6 bits (102), Expect = 0.046, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 70/162 (43%), Gaps = 18/162 (11%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C++C R M + +L+ ++ + + I K I ++ TGG+PL+ Sbjct: 14 LSITDRCNLRCQYCMSERNMNFLPREELLTFEEIKRVVK-IFSKIGIKKIRLTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP- 216 + +L+ + ++ ++ + + + + LK K + I++ +P Sbjct: 72 -RRNFSDILENISSVEGIKEINLTTNGLL-----LGENFESLLKNKVKKINISLDTLNPV 125 Query: 217 --YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E + ++ + I + GI + VL+KG ND+ Sbjct: 126 LYNEITRGGSLDKVLKNIFKAIELGIERVKINIVLIKGKNDN 167 >gi|40062747|gb|AAR37641.1| molybdenum cofactor biosynthesis protein A [uncultured marine bacterium 439] Length = 331 Score = 43.6 bits (102), Expect = 0.046, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 20/162 (12%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C C +C + + VLS ++ + E + +V TGG+PL+ Sbjct: 17 VSVTDHCNYRCHYCRDEDHQTHTTRSEVLSFEEIVKIVGLFAE-LGVTKVRLTGGEPLLR 75 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP 216 + + + L I + + P+ + P L LK G I+I + P Sbjct: 76 KD--ILDLTRMLGDIPGLTDI------PLSTNAHLLPSLAGKLKSHGINRANISIDSLIP 127 Query: 217 ---YEFSEE-----AIAAISRLANAGI-ILLSQSVLLKGIND 249 E + + I I AG+ + V++KG+ND Sbjct: 128 ERFKEITRDGDLARVIKGIDAAIAAGMSPIKLNMVVMKGVND 169 >gi|49480103|ref|YP_034749.1| moaA/nifB/pqqE family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|218901625|ref|YP_002449459.1| hypothetical protein BCAH820_0467 [Bacillus cereus AH820] gi|228925675|ref|ZP_04088762.1| dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|229120083|ref|ZP_04249335.1| dehydrogenase [Bacillus cereus 95/8201] gi|49331659|gb|AAT62305.1| probable moaA/nifB/pqqE family protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|218536468|gb|ACK88866.1| conserved hypothetical protein [Bacillus cereus AH820] gi|228663321|gb|EEL18909.1| dehydrogenase [Bacillus cereus 95/8201] gi|228833950|gb|EEM79500.1| dehydrogenase [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 375 Score = 43.6 bits (102), Expect = 0.046, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|295092195|emb|CBK78302.1| MiaB-like tRNA modifying enzyme [Clostridium cf. saccharolyticum K10] Length = 443 Score = 43.6 bits (102), Expect = 0.046, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 17/119 (14%) Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAY-------IQEKS 142 R +K+ C +C +C R + V+ + AA Y I S Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRSMEDVVQEVEALAASGYKEIVLTGIHLSS 201 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + T +P + L ++ L I ++ +R S ++P+ I E + L Sbjct: 202 YGADFKRTAENPEAAAD--LLSLIVRLDRIPGIERIRLGS----LEPRIITDEFAETLA 254 >gi|23097891|ref|NP_691357.1| hypothetical protein OB0436 [Oceanobacillus iheyensis HTE831] gi|22776115|dbj|BAC12392.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 376 Score = 43.6 bits (102), Expect = 0.047, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 42/117 (35%), Gaps = 12/117 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 ++C + C C + L + E L I + + TGG+P +++ Sbjct: 36 FTTTYMCNMRCAHCAVGYTLQQMDPDALPMELIEKRLDEI---PHLRTLSITGGEP-MMN 91 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 K +++ + L H + ++ + P E++ L +H +H Sbjct: 92 KKSVRQYVLPLLKYAHERGIKTQMNSNLTLPYNRYEEIVPYLD--------VLHISH 140 >gi|320161385|ref|YP_004174609.1| molybdenum cofactor biosynthesis protein A [Anaerolinea thermophila UNI-1] gi|319995238|dbj|BAJ64009.1| molybdenum cofactor biosynthesis protein A [Anaerolinea thermophila UNI-1] Length = 328 Score = 43.6 bits (102), Expect = 0.047, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 72/165 (43%), Gaps = 24/165 (14%) Query: 99 LKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C + + + ++ ++ + + + I ++ TGG+PL Sbjct: 15 ISVTDRCNLRCVYCMPPQGIPLTSHDAIMRYEEIVEVVR-VAAEQGITDIRLTGGEPL-- 71 Query: 158 SHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214 RL +++ + + ++ + + ++ +R E LKEAG K V I++ Sbjct: 72 --ARLGITELVHMIAAVPGIRDISMTTNGLLL--ERFAGE----LKEAGLKRVNISLDTL 123 Query: 215 HPYEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDD 250 +P F+ I +AG+ + +V+++G+NDD Sbjct: 124 NPERFARITRGGSFEQVWRGILAAESAGLYPIKLNTVVMRGVNDD 168 >gi|298385134|ref|ZP_06994693.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 1_1_14] gi|298262278|gb|EFI05143.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 1_1_14] Length = 164 Score = 43.6 bits (102), Expect = 0.047, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%) Query: 89 IVHRYPDRILL-------KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 ++ YP+ I+ L C +C C E + G +L+ + ++ + I+ Sbjct: 13 LLSTYPETIVDGEGIRYSIYLAGCSHHCVGCHNPESWNPRAGELLTEERIQSIIREIKAN 72 Query: 142 SQIWEVIFTGGDPLILSHKRL 162 + V F+GGDP L Sbjct: 73 PLLDGVTFSGGDPFYNPEAFL 93 >gi|161522430|ref|YP_001585359.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans ATCC 17616] gi|160345983|gb|ABX19067.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans ATCC 17616] Length = 408 Score = 43.6 bits (102), Expect = 0.047, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 45/195 (23%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154 L ++ C C +C RE+ GS + + A L I + ++ TGG+P Sbjct: 80 LSVIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLERIARAFVSLGVEKIRITGGEP 139 Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192 L+ + L+ +++ L + V + LR +RV + + Sbjct: 140 LL--RRHLETLIERLAALTTVDGRPVELALTTNGALLAAKARTLRDAGLTRVTVSL-DAL 196 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251 + + + + +A PV + A I AG + +V+ +G NDD Sbjct: 197 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGANDD- 242 Query: 252 EILANLMRTFVELRI 266 + L+R F + Sbjct: 243 -QILPLVRHFRHTGV 256 >gi|303229106|ref|ZP_07315908.1| MiaB-like protein [Veillonella atypica ACS-134-V-Col7a] gi|302516230|gb|EFL58170.1| MiaB-like protein [Veillonella atypica ACS-134-V-Col7a] Length = 435 Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFT 150 R +K+ C YC FC + L S+ + + + E E++ T Sbjct: 147 KSRAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVNEAKRLVEH-GFHEIVLT 200 Query: 151 G---GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G G+ + R L V+K L I ++ +RF S ++ ++ ELI+ L K Sbjct: 201 GIHLGNYGVELPGRPTLADVVKALLEIPNLHRIRFGS----IESVEVSDELIE-LMATDK 255 Query: 206 PVYIAIH 212 V +H Sbjct: 256 RVCPHLH 262 >gi|229182806|ref|ZP_04310045.1| dehydrogenase [Bacillus cereus BGSC 6E1] gi|228600686|gb|EEK58267.1| dehydrogenase [Bacillus cereus BGSC 6E1] Length = 375 Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|196040113|ref|ZP_03107415.1| conserved hypothetical protein [Bacillus cereus NVH0597-99] gi|196045287|ref|ZP_03112519.1| oxidoreductase, radical SAM superfamily [Bacillus cereus 03BB108] gi|228913169|ref|ZP_04076808.1| dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|301052137|ref|YP_003790348.1| putative moaA/nifB/pqqE family protein [Bacillus anthracis CI] gi|196023871|gb|EDX62546.1| oxidoreductase, radical SAM superfamily [Bacillus cereus 03BB108] gi|196028968|gb|EDX67573.1| conserved hypothetical protein [Bacillus cereus NVH0597-99] gi|228846574|gb|EEM91587.1| dehydrogenase [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|300374306|gb|ADK03210.1| probable moaA/nifB/pqqE family protein [Bacillus cereus biovar anthracis str. CI] Length = 375 Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|165870651|ref|ZP_02215304.1| conserved hypothetical protein [Bacillus anthracis str. A0488] gi|167634839|ref|ZP_02393158.1| conserved hypothetical protein [Bacillus anthracis str. A0442] gi|167641253|ref|ZP_02399506.1| conserved hypothetical protein [Bacillus anthracis str. A0193] gi|170688985|ref|ZP_02880186.1| conserved hypothetical protein [Bacillus anthracis str. A0465] gi|177654528|ref|ZP_02936384.1| conserved hypothetical protein [Bacillus anthracis str. A0174] gi|190567633|ref|ZP_03020546.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I] gi|227813094|ref|YP_002813103.1| hypothetical protein BAMEG_0492 [Bacillus anthracis str. CDC 684] gi|254686810|ref|ZP_05150668.1| hypothetical protein BantC_23620 [Bacillus anthracis str. CNEVA-9066] gi|254724884|ref|ZP_05186667.1| hypothetical protein BantA1_20854 [Bacillus anthracis str. A1055] gi|254738964|ref|ZP_05196666.1| hypothetical protein BantWNA_27720 [Bacillus anthracis str. Western North America USA6153] gi|254744552|ref|ZP_05202231.1| hypothetical protein BantKB_26716 [Bacillus anthracis str. Kruger B] gi|254756190|ref|ZP_05208219.1| hypothetical protein BantV_27321 [Bacillus anthracis str. Vollum] gi|164713485|gb|EDR19009.1| conserved hypothetical protein [Bacillus anthracis str. A0488] gi|167510761|gb|EDR86154.1| conserved hypothetical protein [Bacillus anthracis str. A0193] gi|167529913|gb|EDR92661.1| conserved hypothetical protein [Bacillus anthracis str. A0442] gi|170667086|gb|EDT17848.1| conserved hypothetical protein [Bacillus anthracis str. A0465] gi|172080640|gb|EDT65723.1| conserved hypothetical protein [Bacillus anthracis str. A0174] gi|190561420|gb|EDV15392.1| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I] gi|227003854|gb|ACP13597.1| conserved hypothetical protein [Bacillus anthracis str. CDC 684] Length = 375 Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|161525364|ref|YP_001580376.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans ATCC 17616] gi|189349899|ref|YP_001945527.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans ATCC 17616] gi|160342793|gb|ABX15879.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans ATCC 17616] gi|189333921|dbj|BAG42991.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans ATCC 17616] Length = 370 Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 21/125 (16%) Query: 58 RQFIPQKE-----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 R+ IP + +++ +P + + D PL+ + + + C C +C Sbjct: 3 RRIIPLADVSGVPDVSGVPHAPDGTLADTFGRPLRDLR--------ISVTDRCNFRCVYC 54 Query: 113 FRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 RE+ G +L+ ++ E + ++ TGG+PL+ K L+ +++ Sbjct: 55 MPREVFGKDYPFLPHSALLTHEEIERVARIFVAH-GVEKIRITGGEPLL--RKNLEFLIE 111 Query: 168 TLRYI 172 L + Sbjct: 112 RLARL 116 >gi|94502018|ref|ZP_01308524.1| radical SAM domain protein [Oceanobacter sp. RED65] gi|94425825|gb|EAT10827.1| radical SAM domain protein [Oceanobacter sp. RED65] Length = 294 Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 41/87 (47%), Gaps = 8/87 (9%) Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGG 152 ++L++ + C C FC EM ++ + K+ E I I +V G Sbjct: 18 LILQVTNGCSWNNCTFC---EMYTQEQKKFKARKEEEVEQDIINASKMIQPFEKVFLADG 74 Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178 D ++L +RL+ +L++++ + V+ + Sbjct: 75 DAMVLPMRRLKAILQSIKQHMPWVKRV 101 >gi|229089543|ref|ZP_04220810.1| dehydrogenase [Bacillus cereus Rock3-42] gi|228693759|gb|EEL47455.1| dehydrogenase [Bacillus cereus Rock3-42] Length = 375 Score = 43.6 bits (102), Expect = 0.048, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPMDLLLKRLDEI---PHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K + + L H + +R +IN L L + P +H + Sbjct: 90 LSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|303241628|ref|ZP_07328127.1| RNA modification enzyme, MiaB family [Acetivibrio cellulolyticus CD2] gi|302590848|gb|EFL60597.1| RNA modification enzyme, MiaB family [Acetivibrio cellulolyticus CD2] Length = 438 Score = 43.6 bits (102), Expect = 0.049, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 24/133 (18%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEV 147 V++ R +K+ C +C +C + + S+ E L ++ + E+ Sbjct: 138 VYKERTRAFIKIQEGCSQFCSYC-----IIPYARGPIRSRPVEYVLDEVRKLALNGYKEI 192 Query: 148 IFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 + TG D + L ++K + I V+ +R S ++P I E + + Sbjct: 193 VLTGIHIASYGKD---IKTTSLIDIIKKVHEIDGVERVRLGS----IEPTTITHEFVNEI 245 Query: 201 KEAGKPVYIAIHA 213 + K + H Sbjct: 246 GKLEK---VCPHF 255 >gi|282850176|ref|ZP_06259555.1| MiaB-like protein [Veillonella parvula ATCC 17745] gi|294791828|ref|ZP_06756976.1| Fe-S oxidoreductase [Veillonella sp. 6_1_27] gi|294793689|ref|ZP_06758826.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44] gi|282579669|gb|EFB85073.1| MiaB-like protein [Veillonella parvula ATCC 17745] gi|294455259|gb|EFG23631.1| Fe-S oxidoreductase [Veillonella sp. 3_1_44] gi|294457058|gb|EFG25420.1| Fe-S oxidoreductase [Veillonella sp. 6_1_27] Length = 431 Score = 43.6 bits (102), Expect = 0.049, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 17/124 (13%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-- 151 R +K+ C YC FC + L S+ + + + E++ TG Sbjct: 145 RAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVQEAKRLVDHGFHEIVLTGIH 199 Query: 152 -GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 G+ + R L V+K L I ++ +RF S ++ ++ EL++ L K V Sbjct: 200 LGNYGVELPGRPTLADVVKALLEIPNLYRIRFGS----IESVEVSDELVE-LMATNKRVC 254 Query: 209 IAIH 212 +H Sbjct: 255 PHLH 258 >gi|226311475|ref|YP_002771369.1| coproporphyrinogen III oxidase [Brevibacillus brevis NBRC 100599] gi|226094423|dbj|BAH42865.1| putative coproporphyrinogen III oxidase [Brevibacillus brevis NBRC 100599] Length = 507 Score = 43.6 bits (102), Expect = 0.049, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 58/161 (36%), Gaps = 15/161 (9%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF------RREMVGSQKGTVLSSKDT 131 I D + + + + + + CP C +C R + Sbjct: 154 IVDKQLNVVPDLYQIDRELSVYIGIPFCPTKCAYCTFPAYAIRSHTASVNPFLEGLHYEM 213 Query: 132 EAALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189 E +++ Q I + F GG P ++ + ++ +T+ R H+ +R + V P Sbjct: 214 ERMGEWLRANDQRITSIYFGGGTPTSITADDMNQLFETMHRSFPHMGDVRELT-VEAGRP 272 Query: 190 QRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR 229 I E + +K + I P F++E + AI R Sbjct: 273 DTITREKLDVMKRWEVDRISIN-----PQSFTQETLQAIGR 308 >gi|221201327|ref|ZP_03574366.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans CGD2M] gi|221208807|ref|ZP_03581805.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans CGD2] gi|221214113|ref|ZP_03587086.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans CGD1] gi|221166290|gb|EED98763.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans CGD1] gi|221171263|gb|EEE03712.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans CGD2] gi|221178595|gb|EEE11003.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans CGD2M] Length = 370 Score = 43.6 bits (102), Expect = 0.049, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 51/125 (40%), Gaps = 21/125 (16%) Query: 58 RQFIPQKE-----ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 R+ IP + +++ +P + + D PL+ + + + C C +C Sbjct: 3 RRIIPLADVSGVPDVSGVPHAPDGTLADTFGRPLRDLR--------ISVTDRCNFRCVYC 54 Query: 113 FRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 RE+ G +L+ ++ E + ++ TGG+PL+ K L+ +++ Sbjct: 55 MPREVFGKDYPFLPHSALLTHEEIERVARIFVAH-GVEKIRITGGEPLL--RKNLEFLIE 111 Query: 168 TLRYI 172 L + Sbjct: 112 RLARL 116 >gi|49187615|ref|YP_030868.1| molybdenum cofactor biosynthesis protein A, N-terminus [Bacillus anthracis str. Sterne] gi|49181542|gb|AAT56918.1| molybdenum cofactor biosynthesis protein A, N-terminus [Bacillus anthracis str. Sterne] Length = 252 Score = 43.6 bits (102), Expect = 0.049, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 31 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERVAKLFVS-IGVRKIRLTGGE 89 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 90 PLLRKD--LAKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 141 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 142 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 188 >gi|108757868|ref|YP_632408.1| molybdenum cofactor biosynthesis protein MoaA [Myxococcus xanthus DK 1622] gi|108461748|gb|ABF86933.1| molybdenum cofactor biosynthesis protein MoaA [Myxococcus xanthus DK 1622] Length = 334 Score = 43.6 bits (102), Expect = 0.049, Method: Composition-based stats. Identities = 39/223 (17%), Positives = 69/223 (30%), Gaps = 45/223 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C +C K +L ++ E + I V TGG+PLI Sbjct: 30 LSITDRCNFRCSYC--SPASWGGKRDLLGPEELERITSVFARM-GIRRVRLTGGEPLIRP 86 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 + + + + + +Q L + L + L+EAG N Sbjct: 87 D--ILDIARRIAAVPGIQHLAI-TSNASHL-----ERLARPLREAG-----VTQLN--LS 131 Query: 219 FSEEAIAAISRLANAG---IILLS--------------QSVLLKGINDDPEILANLMRTF 261 R++ G +L V+++G+ND E + L+ Sbjct: 132 LDTLLAETFRRISKQGDFDAVLRGVDAAAGAGYASLKLNVVVMRGVND--EEASALIAYA 189 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 P + G + ++V L+ SGL Sbjct: 190 HARGFTP--RFIELMPFGQG---TPVPTA-ELVERLQA--SGL 224 >gi|332669698|ref|YP_004452706.1| Radical SAM domain-containing protein [Cellulomonas fimi ATCC 484] gi|332338736|gb|AEE45319.1| Radical SAM domain protein [Cellulomonas fimi ATCC 484] Length = 398 Score = 43.6 bits (102), Expect = 0.050, Method: Composition-based stats. Identities = 33/202 (16%), Positives = 72/202 (35%), Gaps = 40/202 (19%) Query: 85 PLKGIVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 P++ + H DR ++ ++ C + CR C R + + + L + D + + + Sbjct: 19 PVRVLHHDVSDRPFLVIWEVTRACALACRHC-RADAIPRRDPRELDTDDGKRLMDDLASF 77 Query: 142 SQIWEVI-FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRIN 193 ++ TGGDP L +++ + + P V P R+ Sbjct: 78 GAPRPLLVLTGGDPFERPD--LTELVA------------YGTSIGLSVALAPSVTP-RLT 122 Query: 194 PELIQCLKEAGKPVYIA--------IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 +++ L++AG H + + A+ + +AGI L + + Sbjct: 123 RDVLLELRDAGAKAVSVSLDGAQAETHDAFRGVPGVYDATLTAMEAVRSAGIRLQVNTTV 182 Query: 244 LKGINDDPEILANLMRTFVELR 265 G L ++R ++ Sbjct: 183 TAG---TVHELPWVLRRVLDAG 201 >gi|288959088|ref|YP_003449429.1| nitrogen fixation protein [Azospirillum sp. B510] gi|288911396|dbj|BAI72885.1| nitrogen fixation protein [Azospirillum sp. B510] Length = 521 Score = 43.6 bits (102), Expect = 0.050, Method: Composition-based stats. Identities = 54/256 (21%), Positives = 87/256 (33%), Gaps = 67/256 (26%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H Y R+ + + C + C +C R+ G + + + LA QE Q Sbjct: 65 AHHYFARMHVAVAPACNIQCNYCNRKYDCSNESRPGVVSEKLTPDQALKKILAVAQEIPQ 124 Query: 144 IWEVIFTG-GDPL-----------------------ILSHKRLQ--KVLKTLRY--IKHV 175 + + G GD L LS L + T+ I HV Sbjct: 125 LSVIGIAGPGDSLAAAGKNTFATFEMLQKKAPDLKLCLSTNGLALPDHVDTIAQYNIDHV 184 Query: 176 QILRFHSRVPIVDPQ---RINPELIQCLKE-AGKPVYIAIHANHPYEFSEEAIAAISRLA 231 + + +VDP+ RI P + K G +H E+ + + L Sbjct: 185 -TITIN----MVDPEVGARIYPWIFYKHKRWTGLDAAKILH--------EQQMLGLEMLT 231 Query: 232 NAGIILLSQSVLLKGINDDPEILANLMRTFVELR-----IKPYYLHHPDLAAGTSHF--- 283 + GI++ SV++ G+ND E L + + I P D A GT +F Sbjct: 232 SRGILVKVNSVMIPGVND--EHLLEVNKAVKSCGAFLHNIMPL---ISDPAHGT-YFGLN 285 Query: 284 --RLTIEEGQKIVASL 297 R + K+V Sbjct: 286 GQRGPTAQELKLVQDA 301 >gi|256389735|ref|YP_003111299.1| radical SAM domain-containing protein [Catenulispora acidiphila DSM 44928] gi|256355961|gb|ACU69458.1| Radical SAM domain protein [Catenulispora acidiphila DSM 44928] Length = 815 Score = 43.6 bits (102), Expect = 0.050, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 36/161 (22%) Query: 98 LLKLLHVCPVYCRFCFRRE---MVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-----IF 149 +LK+ C + C C+ E + V+S + E I + ++ V I Sbjct: 13 ILKVHSRCDLACNHCYMYEGADQSWQARPKVMSLETAERIGGRIADHARRHGVDSVRLIL 72 Query: 150 TGGDPLILSHKRLQKVLKTLRYI-KHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 GG+PL+ ++L+ ++ LR + + +R H+ R++ + + V Sbjct: 73 HGGEPLLAGTEQLEGIILRLRKVLDGITADIRVHTNAV-----RLDARFLDLFVKHDVRV 127 Query: 208 YIAI---------H-------ANHPYEFSEEAIAAISRLAN 232 +++ H +HP AA++ L Sbjct: 128 GVSLDGDRLANDRHRLYSDGRTSHPQ-----VRAALALLRR 163 >gi|187778883|ref|ZP_02995356.1| hypothetical protein CLOSPO_02478 [Clostridium sporogenes ATCC 15579] gi|187772508|gb|EDU36310.1| hypothetical protein CLOSPO_02478 [Clostridium sporogenes ATCC 15579] Length = 454 Score = 43.6 bits (102), Expect = 0.050, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 63/169 (37%), Gaps = 39/169 (23%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L + C C FCF ++ + T+ D ++ L+++Q + T Sbjct: 89 AILDVPQRCHNNCLFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FLTLT-----N 138 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215 + + +++++ I + + H+ +P+ R+ EL+ Sbjct: 139 MKDEDIERIIN--YKISPIN-ISVHT----TNPELRV--ELLN----------------- 172 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 F+ + +LA GI + Q VL G+N + E L + L Sbjct: 173 -NRFAGNIYERMKKLAEGGIKMNCQVVLCPGLN-NAEELKRTIEDLYAL 219 >gi|325289531|ref|YP_004265712.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271] gi|324964932|gb|ADY55711.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271] Length = 332 Score = 43.6 bits (102), Expect = 0.050, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C +YC C+R V ++ LS+ + E L I + +IF+GG+PL+ Sbjct: 3 VSWNTTNACNMYCDHCYRDSGVRQEEE--LSTAEAETMLEQIAR-AGFKIMIFSGGEPLM 59 Query: 157 LSH-KRLQKVLKTL 169 L + L Sbjct: 60 RPDIVDLAAYAREL 73 >gi|312877235|ref|ZP_07737203.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A] gi|311795949|gb|EFR12310.1| Radical SAM domain protein [Caldicellulosiruptor lactoaceticus 6A] Length = 218 Score = 43.6 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 15/135 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + CP C FC ++ + G ++ + E L I + E+ + GG+ Sbjct: 8 IFIPQYACPFNCIFCNQKTISGEKEEVSFDRIKRQIEQGLK-INPDEDV-ELAYYGGNFT 65 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214 + +K+L+ + ++ +R +R P I+ E ++ LK K + + I Sbjct: 66 AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLRLLKLYNVKTIELGI--- 117 Query: 215 HPYEFSEEAIAAISR 229 ++ + A +R Sbjct: 118 --QSMFDDVLNACAR 130 >gi|210623865|ref|ZP_03294100.1| hypothetical protein CLOHIR_02051 [Clostridium hiranonis DSM 13275] gi|210153291|gb|EEA84297.1| hypothetical protein CLOHIR_02051 [Clostridium hiranonis DSM 13275] Length = 432 Score = 43.6 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 20/128 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C +C +C + + S+D + + ++ EV+ TG Sbjct: 141 RTRAFMKIQDGCDRFCTYC-----IIPYARGRVRSRDLDNIVEEVKLLASKGYKEVVLTG 195 Query: 152 GDPLI----LSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + K +L V+K + I ++ +R S V+P E ++ + + K Sbjct: 196 IHVASYGKDIKDKEVKLLDVIKAVNEIDGIERIRTSS----VEPILFTDEFVEEISKMNK 251 Query: 206 PVYIAIHA 213 + H Sbjct: 252 ---VCPHF 256 >gi|169830805|ref|YP_001716787.1| molybdenum cofactor biosynthesis protein A [Candidatus Desulforudis audaxviator MP104C] gi|169637649|gb|ACA59155.1| molybdenum cofactor biosynthesis protein A [Candidatus Desulforudis audaxviator MP104C] Length = 327 Score = 43.6 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 45/222 (20%), Positives = 83/222 (37%), Gaps = 41/222 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156 + L C + C +C G QK + E+ + I+ + I ++ TGG+PL+ Sbjct: 17 VSLTERCNLNCFYC----RPGEQKTPTVDGLPLESLMRVIRAGARVGIRKIRLTGGEPLV 72 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANH 215 V+ L I + + + ++ P+ Q L+ AG K V I++ Sbjct: 73 RPDVI--PVVAALNEIPQIDDIALTTNGSLLAPR------AQGLRAAGLKRVNISLDTLR 124 Query: 216 PYEF-----SEEAIAAISRLANAGI----ILLSQSVLLKGINDDP-EILANLMRTFVELR 265 P F + E A ++ L A + V+++GINDD + L Sbjct: 125 PDRFRSITRNGELSAVMNGLEAALAQDLHPVKLNMVVMRGINDDEIDDFVRLTED----- 179 Query: 266 IKPYYLHH----PDLAAGTSHFR----LTIEEGQKIVASLKE 299 +P LH +SH+ + +E ++ + Sbjct: 180 -RP--LHIRFIELMPIGVSSHWASEYYVPADEIRRNIDQRYG 218 >gi|118580731|ref|YP_901981.1| MiaB-like tRNA modifying protein [Pelobacter propionicus DSM 2379] gi|118503441|gb|ABK99923.1| MiaB-like tRNA modifying enzyme [Pelobacter propionicus DSM 2379] Length = 427 Score = 43.6 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 17/151 (11%) Query: 72 EEREDPIGDNNHSPLKGIVHR----YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + ED + D + ++H R L++ + C +C +C G + +S Sbjct: 110 DASEDMVKDAGQATGGALLHLTSFAEHTRAFLQVQNGCDSFCSYCIVPYARG--RSRSVS 167 Query: 128 SKDTEAALAYIQEKSQIWEVIFT----GGDPLILSH-KRLQKVLKTLRYIKHVQILRFHS 182 + + + S EV+ T G L LS + L +++ + ++ LR S Sbjct: 168 PAEVLEGVRRL-VDSGFREVVLTGIHLGAYGLDLSPGESLACLVERILEETSLERLRIGS 226 Query: 183 RVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 ++P + LI + + V H Sbjct: 227 ----LEPNEFDDRLISLFSRSPR-VCHHFHI 252 >gi|310823369|ref|YP_003955727.1| hypothetical protein STAUR_6143 [Stigmatella aurantiaca DW4/3-1] gi|309396441|gb|ADO73900.1| conserved uncharacterized protein [Stigmatella aurantiaca DW4/3-1] Length = 480 Score = 43.6 bits (102), Expect = 0.051, Method: Composition-based stats. Identities = 30/182 (16%), Positives = 67/182 (36%), Gaps = 34/182 (18%) Query: 86 LKGIVHRYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 L + +Y R + + C C++C V + ++ + + AL Sbjct: 79 LDLLALKYRTRAEQLAAFTGLHIFVVTLRCDHSCQYCQVSRQVEDRARFDMTREHADRAL 138 Query: 136 AYIQEKSQIW-EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRI 192 + + ++ F GG+PL L+ ++ V++ + + L+F V + R+ Sbjct: 139 DLVFQSPSPALKIEFQGGEPL-LNFGLIRHVVERALTLNQPLGRDLQF---VIATNLSRL 194 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEE------------AIAAISRLANAGIILLSQ 240 + E++ K+ G ++++ + P + I R A L Q Sbjct: 195 SEEMLAFCKQHG--IFLSTSLDGPEALHNAQRPVRGGNSHQRTVEGIRRAREA---LGDQ 249 Query: 241 SV 242 +V Sbjct: 250 AV 251 >gi|299783310|gb|ADJ41308.1| Molybdenum (Mo2+) cofactor biosynthesis enzyme [Lactobacillus fermentum CECT 5716] Length = 332 Score = 43.6 bits (102), Expect = 0.052, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 40/92 (43%), Gaps = 4/92 (4%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R D + + + C + C +C +E + VLS + + + I +V T Sbjct: 10 RLHDYVRISITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLITNFAQ-LGIHKVRIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 GG+PL+ + +++ ++ I ++ + + Sbjct: 69 GGEPLLRTDVV--DIVRRIKEIDGIEDVSITT 98 >gi|313680339|ref|YP_004058078.1| radical sam domain protein [Oceanithermus profundus DSM 14977] gi|313153054|gb|ADR36905.1| Radical SAM domain protein [Oceanithermus profundus DSM 14977] Length = 357 Score = 43.6 bits (102), Expect = 0.052, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 15/118 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE---VI 148 RYP + ++ H C + C+ C ++ + TE A +++E + ++ Sbjct: 7 RYPFLVAWEMTHACDLACKHC----RASAEPDPLPGEITTEEAFRFLEEMATYKPKPILL 62 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TGGDPL L ++L+ R + ++ P V P + E+I KE Sbjct: 63 PTGGDPL--KRHDLWEILEKARELG----IKIGI-TPAVTP-LLTHEVIDRFKELDVH 112 >gi|302330623|gb|ADL20817.1| Putative coenzyme PQQ synthesis related protein [Corynebacterium pseudotuberculosis 1002] Length = 412 Score = 43.6 bits (102), Expect = 0.052, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 50/226 (22%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-V 147 I H+ P + ++ C + C+ C G + + + A L + + V Sbjct: 34 INHK-PFIAIWEVTRACGLVCKHCRANAQHKPHPGQLTTKQGF-ALLKDLASYDKPRPLV 91 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCL 200 + TGGDP + L+++++ + ++ P V P R+ E I L Sbjct: 92 VLTGGDPF--EREDLEELVE------------YGTQQGLSVSLSPSVTP-RLTSERIHRL 136 Query: 201 KEA-GKPVYIAIHANHPY----------EFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 + GK + +++ F A + +AG L S L K + Sbjct: 137 HDLGGKAMSMSLDGATAQTHDAFRGFSGTFDATVSMA-QTILDAGFRLQINSTLTK---N 192 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 + L++T +E+ K +Y+ F + G + A Sbjct: 193 NIREAPLLLKTVMEMGAKMWYVF----------FLVPTGRGAALHA 228 >gi|65319439|ref|ZP_00392398.1| COG2896: Molybdenum cofactor biosynthesis enzyme [Bacillus anthracis str. A2012] Length = 337 Score = 43.6 bits (102), Expect = 0.052, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 34/172 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ + + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LPKLIARLAKLEGXKDIGLTTNGIHLAKQ------AKALKEAGLKRVNISLD 128 Query: 212 -------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEDRVFQKINGRHVS-----TKPVLKGIEAAKEAGLEVKVNMVVKKGMNDS 175 >gi|303232181|ref|ZP_07318884.1| MiaB-like protein [Veillonella atypica ACS-049-V-Sch6] gi|302513287|gb|EFL55326.1| MiaB-like protein [Veillonella atypica ACS-049-V-Sch6] Length = 431 Score = 43.6 bits (102), Expect = 0.053, Method: Composition-based stats. Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFT 150 R +K+ C YC FC + L S+ + + + E E++ T Sbjct: 143 KSRAFMKIQEGCNNYCAFC-----IIPYTRGKLKSRKVDDIVNEAKRLVEH-GFHEIVLT 196 Query: 151 G---GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G G+ + R L V+K L I ++ +RF S ++ ++ ELI+ L K Sbjct: 197 GIHLGNYGVELPGRPTLADVVKALLEIPNLHRIRFGS----IESVEVSDELIE-LMATDK 251 Query: 206 PVYIAIH 212 V +H Sbjct: 252 RVCPHLH 258 >gi|295402412|ref|ZP_06812366.1| molybdenum cofactor biosynthesis protein A [Geobacillus thermoglucosidasius C56-YS93] gi|294975575|gb|EFG51199.1| molybdenum cofactor biosynthesis protein A [Geobacillus thermoglucosidasius C56-YS93] Length = 340 Score = 43.6 bits (102), Expect = 0.053, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 38/174 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C E+ G + +L+ ++ E + ++ TGG+ Sbjct: 21 ISVTDQCNFRCVYCMPAEIFGPNFRFLREDELLTIEEMTLLAESFAE-LGVEKIRITGGE 79 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL--------------RF---HSRVPIVDPQRINPEL 196 PL+ L ++ L I ++ + R + V ++ ++ Sbjct: 80 PLLRRD--LDVFIERLVRIPGIRDIGLTTNGIHLVKWAKRLKEAGLKRVNVSLDALDDDI 137 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + G V + + I AG+ + V+ KG+ND Sbjct: 138 FKKMNGVGVGV-------------KPVLKGIEAAVEAGLGVKVNMVVKKGMNDS 178 >gi|312112039|ref|YP_003990355.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. Y4.1MC1] gi|311217140|gb|ADP75744.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. Y4.1MC1] Length = 340 Score = 43.6 bits (102), Expect = 0.053, Method: Composition-based stats. Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 38/174 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C E+ G + +L+ ++ E + ++ TGG+ Sbjct: 21 ISVTDQCNFRCVYCMPAEIFGPNFRFLREDELLTIEEMTLLAESFAE-LGVEKIRITGGE 79 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL--------------RF---HSRVPIVDPQRINPEL 196 PL+ L ++ L I ++ + R + V ++ ++ Sbjct: 80 PLLRRD--LDVFIERLVRIPGIRDIGLTTNGIHLVKWAKRLKEAGLKRVNVSLDALDDDI 137 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + G V + + I AG+ + V+ KG+ND Sbjct: 138 FKKMNGVGVGV-------------KPVLKGIEAAVEAGLGVKVNMVVKKGMNDS 178 >gi|302385233|ref|YP_003821055.1| Radical SAM domain protein [Clostridium saccharolyticum WM1] gi|302195861|gb|ADL03432.1| Radical SAM domain protein [Clostridium saccharolyticum WM1] Length = 347 Score = 43.6 bits (102), Expect = 0.053, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 11/109 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +L C + C+ C+ + + ++S++ + Y+ E I+E I +GG+PL+ Sbjct: 45 FELTSHCNLACKHCYNNSGINNISDA-MTSQNWISFSQYLVEHGGIFECIISGGEPLLFG 103 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSR-VPIVDPQRINPELIQCLKEAGKP 206 + L + I H + I + + E+ L++ Sbjct: 104 ND-----LFKIMDILHED----GTLFFLITNGYLLTKEIADQLRKYRYH 143 >gi|296132310|ref|YP_003639557.1| Radical SAM domain protein [Thermincola sp. JR] gi|296030888|gb|ADG81656.1| Radical SAM domain protein [Thermincola potens JR] Length = 443 Score = 43.6 bits (102), Expect = 0.054, Method: Composition-based stats. Identities = 25/164 (15%), Positives = 61/164 (37%), Gaps = 41/164 (25%) Query: 80 DNNHSPLKGIVH-------------------RYPDRIL-------LKLLHVCPVYCRFCF 113 + +++ +KGIV+ +YP + +++ CP C FC Sbjct: 149 EEDYTSVKGIVYMEKRGGIRFTGRRRPVNLNKYPPFAIKHRLFSPIEITRGCPYLCSFCQ 208 Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDPL--------ILSHKRLQ 163 + G Q + E L Y++ ++ + ++ F + ++ +L+ Sbjct: 209 TGHIFGPQ----PRHRSIENILGYVRLLTERGLTDIKFITPNAFSYGSPDGKTINVNKLE 264 Query: 164 KVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 +L+ +R I + + S V P+ + E + +++ Sbjct: 265 ALLRGVRAIIGNRGRIFMGSFPSEVRPEHVTEETVNLVRKYANN 308 >gi|291539696|emb|CBL12807.1| MiaB-like tRNA modifying enzyme [Roseburia intestinalis XB6B4] Length = 435 Score = 43.6 bits (102), Expect = 0.054, Method: Composition-based stats. Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C +C +C + +G V S K E L I KS EV+ TG Sbjct: 143 HTRAFIKVQDGCNQFCSYCI----IPFARGRVRSRK-MEDVLNEINELAKSGYKEVVLTG 197 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + + + L +++ + I+ ++ +R S ++P+ + + + L E K Sbjct: 198 IHLSSYGVDTGETLLSLIEHVHEIEGIERIRLGS----LEPRIVTEDFAKRLSELTK--- 250 Query: 209 IAIHA 213 I H Sbjct: 251 ICPHF 255 >gi|229161145|ref|ZP_04289132.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus R309803] gi|228622241|gb|EEK79080.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus R309803] Length = 337 Score = 43.6 bits (102), Expect = 0.054, Method: Composition-based stats. Identities = 34/167 (20%), Positives = 68/167 (40%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G+ + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGTDYAFLQEECLLTFDEIERLARLFISM-GVEKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LPKLIARLAKLEGLKDIGLTTNGIHLAKQ------AKLLKEAGLKRVNISLD 128 Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H N ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEDHVFQKINGRNVSTKPVLKGIEAAKAAGLEVKVNMVVKKGMNDS 175 >gi|57168872|ref|ZP_00368002.1| MiaB-like tRNA modifying enzyme [Campylobacter coli RM2228] gi|305431977|ref|ZP_07401144.1| 2-methylthioadenine synthetase [Campylobacter coli JV20] gi|57019708|gb|EAL56394.1| MiaB-like tRNA modifying enzyme [Campylobacter coli RM2228] gi|304445061|gb|EFM37707.1| 2-methylthioadenine synthetase [Campylobacter coli JV20] Length = 418 Score = 43.6 bits (102), Expect = 0.054, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 18/132 (13%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + +L + A Y EV+ Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEQALLRQVEILGANGY-------SEVVL 184 Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L + L K+L+ + I ++ +R S ++P +I+ ++ L E Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDERWME 240 Query: 207 VYIAIHANHPYE 218 ++ I H E Sbjct: 241 RHLHIALQHTSE 252 >gi|219669369|ref|YP_002459804.1| radical SAM protein [Desulfitobacterium hafniense DCB-2] gi|219539629|gb|ACL21368.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2] Length = 332 Score = 43.6 bits (102), Expect = 0.054, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 26/152 (17%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C +YC C+R G Q L++ + + L I + +IF+GG+PL+ Sbjct: 3 VSWNTTNACNMYCDHCYRDA--GCQAEEELNTAEAKTLLEQIAR-AGFKIMIFSGGEPLL 59 Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKP---VYI-A 210 + +++ + LR F + + I E+ + LKEAG + + + Sbjct: 60 RPD--IVELVAYATSLG----LRPVFGTNGTL-----ITVEMARRLKEAGAMGMGISLDS 108 Query: 211 IHANHPYEFS------EEAIAAISRLANAGII 236 +H + +F EEA+ + G+ Sbjct: 109 LHIDKHNQFRKYPRAWEEAVQGMRNCREVGLP 140 >gi|160915923|ref|ZP_02078131.1| hypothetical protein EUBDOL_01946 [Eubacterium dolichum DSM 3991] gi|158432399|gb|EDP10688.1| hypothetical protein EUBDOL_01946 [Eubacterium dolichum DSM 3991] Length = 249 Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 18/190 (9%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + L+ C + C++C + Q+ + S + + AL Y Q + +GG+ Sbjct: 19 PGVRFVIFLNGCQMRCKYCHNVDTWQMQEANMTSDELLKKALRYRSYWKQGGGITVSGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVYIAIH 212 PL+ L+ + + + K V + + P Q +L + L + H Sbjct: 79 PLLQIDFVLE-LFEKAKA-KGVHTV-LDTSGNPFTIEQPFFDKLQKLLAVTDLILLDIKH 135 Query: 213 AN---HPYEFSEEAIAAI----SRLANAGIILLSQSVLLKGINDDPEILANLM---RTFV 262 + H E + + A I L+ + + VL+ GINDD L L + Sbjct: 136 IDALAH-KELTGQDNANILAFARYLSEIQKPVWIRHVLVPGINDDEAQLKRLSVFIKELS 194 Query: 263 ---ELRIKPY 269 + + PY Sbjct: 195 NVERVEVLPY 204 >gi|194335250|ref|YP_002017044.1| Radical SAM domain protein [Pelodictyon phaeoclathratiforme BU-1] gi|194307727|gb|ACF42427.1| Radical SAM domain protein [Pelodictyon phaeoclathratiforme BU-1] Length = 428 Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 41/187 (21%), Positives = 66/187 (35%), Gaps = 29/187 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTG 151 P I ++ C + C C V S +V T L I E + I E+ F+G Sbjct: 96 PQTIFWEVTSRCNLQCLHC-----VVSAGESVTHDLSTRRCLELIDEWAAIGVQEITFSG 150 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+PL L++ L L + L + + ++ + K G V I++ Sbjct: 151 GEPL------LREDLFELAAAAKQRNLTI---SMATNGTLMTRDVARRCKALGFDVQISL 201 Query: 212 HANHP---------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 + E + + I + G+ L +VL K DD L L+ Sbjct: 202 DGSTAEIYGAVRGRKEAFADVMEGIRNTLSEGVNLTVGTVLTKNNVDDIPELLKLVE--- 258 Query: 263 ELRIKPY 269 I PY Sbjct: 259 RSGI-PY 264 >gi|315928738|gb|EFV08014.1| uncharacterized protein family UPF0004 family protein [Campylobacter jejuni subsp. jejuni 305] Length = 255 Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 50/129 (38%), Gaps = 18/129 (13%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + +L + A Y E++ Sbjct: 137 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 189 Query: 150 TGGD--PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L + L K+L+ + I ++ +R S ++P +I+ ++ L E Sbjct: 190 TGTNIGSYGLKNGTSLGKLLQKMGQISGIKRIRLGS----LEPAQIDESFLEILDETWLE 245 Query: 207 VYIAIHANH 215 ++ I H Sbjct: 246 RHLHIALQH 254 >gi|308070144|ref|YP_003871749.1| Fe-S oxidoreductase [Paenibacillus polymyxa E681] gi|305859423|gb|ADM71211.1| Predicted Fe-S oxidoreductase [Paenibacillus polymyxa E681] Length = 371 Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 6/71 (8%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVI 148 H P ++ ++ C + C C R E L+ ++ + + I E V+ Sbjct: 11 HTDPFIVIWEVTRACALKCLHC-RAEAQYKPDPRQLTLEEGKKLIDQIAEMNHP---LVV 66 Query: 149 FTGGDPLILSH 159 FTGGDPL+ Sbjct: 67 FTGGDPLMRPD 77 >gi|258514901|ref|YP_003191123.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257778606|gb|ACV62500.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 367 Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 12/88 (13%) Query: 95 DRILLKL------LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEV 147 DR+ + ++C C+FC G + VLS + EA ALA I E+ Sbjct: 54 DRVHFIVNRHINHTNICANRCKFCAFGRDAGDKGAYVLSLDEIEAKALA--SRNENISEI 111 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHV 175 GG + +L ++ L+ +K V Sbjct: 112 HIVGG---LNPDLKLDYYVEALKRVKRV 136 >gi|255525323|ref|ZP_05392263.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7] gi|296188191|ref|ZP_06856583.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7] gi|255510995|gb|EET87295.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7] gi|296047317|gb|EFG86759.1| MiaB-like tRNA modifying enzyme [Clostridium carboxidivorans P7] Length = 436 Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 60/189 (31%), Gaps = 37/189 (19%) Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFCFR 114 +Q + KE + E + + Y D R LK+ C +C +C Sbjct: 115 RKQVVEVKEVMKNNAFEELN-------------IESYQDKTRAFLKIQDGCNRFCSYCLI 161 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-------GDPLILSHKRLQKVLK 167 + K + E+I +G D + L VL+ Sbjct: 162 -PFARGAVCSKPPEKIISEVKE-LAAH-GFKEIILSGIHTASYGVD--LEEDCSLLSVLE 216 Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--PYEFSEEAIA 225 + I ++ +R S +DPQ +I+ + K + H H E + Sbjct: 217 QIDKIPGIERVRIGS----IDPQFFTEGVIERISVLKK---LCPHF-HLSLQSGCNETLK 268 Query: 226 AISRLANAG 234 ++R AG Sbjct: 269 RMNRRYTAG 277 >gi|289578151|ref|YP_003476778.1| radical SAM protein [Thermoanaerobacter italicus Ab9] gi|289527864|gb|ADD02216.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9] Length = 726 Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 25/160 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +++ + C C FC +G + S D + + +++ + + + TGG+PLI Sbjct: 410 VIIGITRECNGNCNFC----QIGGPQKDTNKSFDYKQLVRFLKGNN--YHIQITGGEPLI 463 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-----PVYIAI 211 L +++ L+ H+ + + + + I+ E I+ LKE+ V I Sbjct: 464 -RKSELTPLIRELKKDGHI--ITLLTNLVL-----IDREFIELLKESFSVLDVGQVSIYA 515 Query: 212 HANHPYEFS------EEAIAAISRLANAGIILLSQSVLLK 245 H +E + I+ + N GI L + VL K Sbjct: 516 HNPQLHEIISGRNDWSKLNTLITEVINNGIQLRANLVLTK 555 >gi|168217879|ref|ZP_02643504.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens NCTC 8239] gi|182380088|gb|EDT77567.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens NCTC 8239] Length = 473 Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 47/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + K L+ + + ++ + G DP+ Sbjct: 91 LYVSNYCVNNCTYCGYKYCNNELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150 Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202 L +L ++ I ++ +R R+ + E + LK+ Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAAT-TVENYKRLKDAEIGTYILFQET 203 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261 KP Y +H + P A+ R AGI + V L G+ D E LA LM Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262 Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307 + P+ L P + + + E+ +KIVA L+ L P Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312 >gi|89894967|ref|YP_518454.1| hypothetical protein DSY2221 [Desulfitobacterium hafniense Y51] gi|89334415|dbj|BAE84010.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 332 Score = 43.2 bits (101), Expect = 0.055, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 26/152 (17%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C +YC C+R G Q L++ + + L I + + +IF+GG+PL+ Sbjct: 3 VSWNTTNACNMYCDHCYRDA--GCQAEEELNTAEAKTLLEQIAK-AGFKIMIFSGGEPLL 59 Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKP---VYI-A 210 + +++ + LR F + + I E+ + LKEAG + + + Sbjct: 60 RPD--IVELVAYATSLG----LRPVFGTNGTL-----ITVEMARRLKEAGAMGMGISLDS 108 Query: 211 IHANHPYEFS------EEAIAAISRLANAGII 236 +H + +F EEA+ + G+ Sbjct: 109 LHIDKHNQFRKYPRAWEEAVQGMRNCREVGLP 140 >gi|313896883|ref|ZP_07830430.1| putative heme d1 biosynthesis radical SAM protein NirJ2 [Selenomonas sp. oral taxon 137 str. F0430] gi|320530825|ref|ZP_08031863.1| radical SAM domain protein [Selenomonas artemidis F0399] gi|312974330|gb|EFR39798.1| putative heme d1 biosynthesis radical SAM protein NirJ2 [Selenomonas sp. oral taxon 137 str. F0430] gi|320136911|gb|EFW28855.1| radical SAM domain protein [Selenomonas artemidis F0399] Length = 333 Score = 43.2 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159 + C +YC C+R G + LS+++ + L I + + +IF+GG+PL Sbjct: 8 TTNACNMYCAHCYRDA--GCRAEEELSTEEAKKLLREIAK-AGFRIMIFSGGEPLTRPDI 64 Query: 160 KRLQKVLKTLRYIK 173 L + L I Sbjct: 65 IELVAYARGLGLIP 78 >gi|312127785|ref|YP_003992659.1| Radical SAM domain-containing protein [Caldicellulosiruptor hydrothermalis 108] gi|311777804|gb|ADQ07290.1| Radical SAM domain protein [Caldicellulosiruptor hydrothermalis 108] Length = 341 Score = 43.2 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 46/113 (40%), Gaps = 9/113 (7%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + CP C FC ++ + G ++ L + E L I + E+ + GG+ Sbjct: 8 IFIPQYACPFNCIFCNQKTISGEKEEVSLDRIKRQIEQGLK-INPNEDV-ELAYYGGNFT 65 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + +K+L+ + ++ +R +R P I+ E ++ LK Sbjct: 66 AIDIDFQKKLLELANSFERIKSIRISTR-----PDCIDEERLRLLKLYNVRTI 113 >gi|253570571|ref|ZP_04847979.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 1_1_6] gi|251839520|gb|EES67603.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 1_1_6] Length = 164 Score = 43.2 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%) Query: 89 IVHRYPDRILL-------KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 ++ YP+ I+ L C +C C E + G +L+ + ++ + I+ Sbjct: 13 LLSTYPETIVDGEGIRYSIYLAGCSHHCVGCHNPESWNPRAGELLTEERIQSIIREIKAN 72 Query: 142 SQIWEVIFTGGDPLILSHKRL 162 + V F+GGDP L Sbjct: 73 PLLDGVTFSGGDPFYNPEAFL 93 >gi|212697143|ref|ZP_03305271.1| hypothetical protein ANHYDRO_01709 [Anaerococcus hydrogenalis DSM 7454] gi|212675918|gb|EEB35525.1| hypothetical protein ANHYDRO_01709 [Anaerococcus hydrogenalis DSM 7454] Length = 166 Score = 43.2 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 88 GIVHRYPD------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 G + +Y R + C C+ CF +E + G + K T+ ++Y+++ Sbjct: 4 GQIRKYDVANGPGIRTSFFVTG-CHANCKNCFNKEYMDPNFGNFWTEKQTQEVISYLKKD 62 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 +I + GG+P S + L K++K +R Sbjct: 63 -EIEGLTILGGEPFE-STEDLIKIVKKIRE 90 >gi|83591857|ref|YP_425609.1| GTP cyclohydrolase subunit MoaA [Rhodospirillum rubrum ATCC 11170] gi|83574771|gb|ABC21322.1| GTP cyclohydrolase subunit MoaA [Rhodospirillum rubrum ATCC 11170] Length = 365 Score = 43.2 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 25/168 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C +MV K +LS ++ E ALA+I+ + ++ TGG+PL Sbjct: 46 LSVTDRCDLRCAYCMAEDMVFLPKRDLLSLEELETVALAFIRR--GVRKIRITGGEPLH- 102 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCLKEAGKPVYIA 210 + L +++ L + LR R + R+ + + ++ Sbjct: 103 -RRGLMGLIENLG-----RTLRPAERECGLDELTLTTNATRLAEVAGDLAARGVRRINVS 156 Query: 211 IHANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250 + P F A ++ AG+ + +V L+G+N+D Sbjct: 157 LDTLRPERFRAITRRGDLDRVMAGLAAADRAGLAVKINTVALRGVNED 204 >gi|304437665|ref|ZP_07397617.1| radical SAM domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369298|gb|EFM22971.1| radical SAM domain protein [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 378 Score = 43.2 bits (101), Expect = 0.056, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159 + + C +YC C+R G + LS+++ + L I + + +IF+GG+PL Sbjct: 53 VTNACNMYCAHCYRDA--GCRADEELSTEEGKKLLREIAK-AGFRIMIFSGGEPLSRPDI 109 Query: 160 KRLQKVLKTLRYIK 173 L + L I Sbjct: 110 LELVAYARGLGLIP 123 >gi|147677311|ref|YP_001211526.1| Fe-S oxidoreductases [Pelotomaculum thermopropionicum SI] gi|146273408|dbj|BAF59157.1| predicted Fe-S oxidoreductases [Pelotomaculum thermopropionicum SI] Length = 330 Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 77/213 (36%), Gaps = 41/213 (19%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C +YC+ C+R G++ LS+++ A + I + +IF+GG+PL+ Sbjct: 3 VSWNTTNACNMYCKHCYRDA--GAKAAEELSTEEGLALIDQIAG-AGFKIMIFSGGEPLM 59 Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA- 213 + ++ R + LR F + + I E + LKEAG V + I Sbjct: 60 RDD--IFTLVARARE----RGLRPVFGTNGTL-----ITGETARRLKEAGAAV-MGISLD 107 Query: 214 -----NHPY-EFSE----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 +H + A+ + AG+ + ++ D+ E L V Sbjct: 108 SVDPKSHDDFRATPGAWQGAVDGMRACREAGLPFQVHTTVMGWNKDEVE---RLTDFAVR 164 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 + +++ F + I Sbjct: 165 MGAVGHHIF----------FLVPTGRAVGIAEE 187 >gi|29347409|ref|NP_810912.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides thetaiotaomicron VPI-5482] gi|29339309|gb|AAO77106.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides thetaiotaomicron VPI-5482] Length = 164 Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 33/81 (40%), Gaps = 7/81 (8%) Query: 89 IVHRYPDRILL-------KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 ++ YP+ I+ L C +C C E + G +L+ + ++ + I+ Sbjct: 13 LLSTYPETIVDGEGIRYSIYLAGCSHHCVGCHNPESWNPRAGELLTEERIQSIIREIKAN 72 Query: 142 SQIWEVIFTGGDPLILSHKRL 162 + V F+GGDP L Sbjct: 73 PLLDGVTFSGGDPFYNPEAFL 93 >gi|146296621|ref|YP_001180392.1| radical SAM domain-containing protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410197|gb|ABP67201.1| Radical SAM domain protein [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 341 Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 52/114 (45%), Gaps = 11/114 (9%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + CP C FC ++ + G ++ + + E L+ + K + E+ + GG+ Sbjct: 8 IFIPQYGCPFKCIFCNQKIISGEKEDVTVQRIKRQIEEGLS--KNKGEDVELAYYGGN-F 64 Query: 156 ILSHKRLQ-KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 ++Q K+L+ R ++++ +R +R P I+ E++ LK+ Sbjct: 65 TAIDIKMQQKLLELARSFENIKSIRISTR-----PDCIDKEILGFLKDYNVKTV 113 >gi|188589299|ref|YP_001920259.1| hypothetical protein CLH_0864 [Clostridium botulinum E3 str. Alaska E43] gi|188499580|gb|ACD52716.1| conserved hypothetical protein [Clostridium botulinum E3 str. Alaska E43] Length = 434 Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 42/125 (33%), Gaps = 15/125 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C FC G+ + K E + E EVI +G Sbjct: 141 KTRAFLKIQDGCNRFCTFCLIPYARGA-TCSKKPEKVIEEVKK-LAEH-GFKEVILSGIH 197 Query: 154 PLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 L +L+ + I + +R S ++P E+I +K K Sbjct: 198 TASYGVDLGAGVTLISLLEDIEKIDGIDRVRIGS----IEPAFFTDEVINKIKNMKK--- 250 Query: 209 IAIHA 213 + H Sbjct: 251 LCPHF 255 >gi|167753918|ref|ZP_02426045.1| hypothetical protein ALIPUT_02203 [Alistipes putredinis DSM 17216] gi|167658543|gb|EDS02673.1| hypothetical protein ALIPUT_02203 [Alistipes putredinis DSM 17216] Length = 344 Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats. Identities = 41/228 (17%), Positives = 74/228 (32%), Gaps = 44/228 (19%) Query: 95 DRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151 DR L + C + CRFC LS+ + + + E+ ++ V+F G Sbjct: 101 DRATLCISSQAGCRMGCRFCATGRQ---GLQHSLSTNEILNQIESLPERERLTNVVFMGM 157 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEAG 204 G+PL L +L L + F P RI L + L+ Sbjct: 158 GEPL----DNLDSLLPALEVLTSAWG--FG-----WSPTRITVSTAGVASRLERFLEATQ 206 Query: 205 KPVYIAIH--ANH------PYEFSEEAIAAISRLANAGIILLSQS------VLLKGINDD 250 + +++H H P E + + L Q +++ G+ND Sbjct: 207 VHLAVSLHNPFPHERAEIMPIEKAWPIREVVEILRRYDFT--HQRRVSFEYIVMSGLNDS 264 Query: 251 PEILANLMRTFVELRIKPYYL-HHPDLAAGTSHFRLTIEEGQKIVASL 297 P + L R ++ + + H G+ +F + Sbjct: 265 PRHIRELCRLLDGIKCRINLIRFH--KIPGSPYFS-PDDRAMIAFRDA 309 >gi|94967848|ref|YP_589896.1| radical SAM family Fe-S protein [Candidatus Koribacter versatilis Ellin345] gi|94549898|gb|ABF39822.1| Fe-S protein, radical SAM family [Candidatus Koribacter versatilis Ellin345] Length = 375 Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats. Identities = 34/212 (16%), Positives = 70/212 (33%), Gaps = 35/212 (16%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 P + + C + C C L++ D + + I E + + TGG Sbjct: 10 KPFIAIWETTQACDLACVHCRACAQPQRSSDE-LTTADAKKLVDEIAEM-AVPVFVLTGG 67 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAI 211 DPL + +++ + +R S P P + E I LKEAG + +++ Sbjct: 68 DPLKRPD--IFEIVGYAAS----RKVRI-SLTPSATP-LLTREAILRLKEAGLARLAVSL 119 Query: 212 HANHPYEFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 E + A+ G+ + + + + + + +++ Sbjct: 120 DGPTA-EIHDAFRKVAGSFQWTMDAVRWAREIGLPVQINTTITRH---NFHQIHDVIALL 175 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 +L I + + F + GQ I Sbjct: 176 EKLDITLWSVF----------FLVPTGRGQDI 197 >gi|71907513|ref|YP_285100.1| radical SAM family protein [Dechloromonas aromatica RCB] gi|71847134|gb|AAZ46630.1| Radical SAM [Dechloromonas aromatica RCB] Length = 296 Score = 43.2 bits (101), Expect = 0.057, Method: Composition-based stats. Identities = 19/91 (20%), Positives = 40/91 (43%), Gaps = 11/91 (12%) Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-----SQIWEVI 148 + ++L + C C FC EM + + ++ + + L I+ + I V Sbjct: 18 ESLILPVTDGCSWNKCTFC---EMYTAPQKKFVARGE-DEVLESIRLTGLRYGNDIRRVF 73 Query: 149 FTGGDPLILSHKRLQKVLKTLR-YIKHVQIL 178 GD L+L +RL +L+ + ++ V+ + Sbjct: 74 LADGDALVLPTRRLLTILEAIHTHMPAVRRI 104 >gi|242399892|ref|YP_002995317.1| MooA-like molybdenum cofactor biosynthesis protein A related [Thermococcus sibiricus MM 739] gi|242266286|gb|ACS90968.1| MooA-like molybdenum cofactor biosynthesis protein A related [Thermococcus sibiricus MM 739] Length = 419 Score = 43.2 bits (101), Expect = 0.058, Method: Composition-based stats. Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 37/185 (20%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-- 145 G++ R + I ++ C V C FC E S+ + D + L + E +Q Sbjct: 108 GLIDRGTNLIQVRGSTGCNVSCIFCSVDEGPYSRTRILDYVVDVDYLLKWFNEVAQFKGK 167 Query: 146 --EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 E G G+PL+ + ++++ LR +V ++ S +N +LI+ L E Sbjct: 168 RLEAHLDGQGEPLVYP--FIVELVQGLRENPNVSVISMQSNG-----ALLNDKLIEELAE 220 Query: 203 AGK-PVYIAIH-----------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 AG V ++IH NH E +E L NAGI +L V++ Sbjct: 221 AGLDRVNLSIHSFDPEKAKMLMGMKDYDLNHVLEMAE-------ALINAGIDVLFAPVII 273 Query: 245 KGIND 249 GIND Sbjct: 274 FGIND 278 >gi|325290323|ref|YP_004266504.1| SSU ribosomal protein S12P methylthiotransferase [Syntrophobotulus glycolicus DSM 8271] gi|324965724|gb|ADY56503.1| SSU ribosomal protein S12P methylthiotransferase [Syntrophobotulus glycolicus DSM 8271] Length = 442 Score = 43.2 bits (101), Expect = 0.058, Method: Composition-based stats. Identities = 28/153 (18%), Positives = 58/153 (37%), Gaps = 23/153 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +K+ C C +C ++ GS + + + +A++ E+ + E+I T D Sbjct: 147 AYIKIAEGCNNRCSYCVIPQIKGSYRSR--TKESILGEVAWLAEQ-GVKEIIVTAQDTTR 203 Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210 L +L + I ++ +R P+ ELI+ +++ K Y+ Sbjct: 204 YGMDIYQGLELANLLAAIAEIDGIEWIRL----LYCYPEVFTDELIEVMRKEPKICKYLD 259 Query: 211 IHANHPY-----EFS-----EEAIAAISRLANA 233 I H E + ++ I++L A Sbjct: 260 IPLQHANNKILTEMNRRYLKQDVERLINKLRKA 292 >gi|298504362|gb|ADI83085.1| cobalamin-binding radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter sulfurreducens KN400] Length = 428 Score = 43.2 bits (101), Expect = 0.058, Method: Composition-based stats. Identities = 39/193 (20%), Positives = 74/193 (38%), Gaps = 35/193 (18%) Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 P+ R +P +E+ P R + + RY ++ CP C FC Sbjct: 132 PVYRAPVPT-DEILSAPWPRREILA----------GRRYLTTQTVQASRGCPYDCSFCT- 179 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 V G +D + LA I+ +++ D L+ + + +L+ L + Sbjct: 180 ---VTPYFGRTFRYRDPDDILAEIRSFR--RKLVVFLDDNLLGDPIKARPILRGLAEMD- 233 Query: 175 VQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIA-------IHANHPYEFSEEAI- 224 +R+ S+ + R +PEL++ + ++G HAN + + Sbjct: 234 ---VRWGSQTNL----RFAEDPELLKLVADSGCIGLFVGIESVTGSHANMAKSGTRYSQT 286 Query: 225 AAISRLANAGIIL 237 + R+ +AGIIL Sbjct: 287 DLMKRVRDAGIIL 299 >gi|293115612|ref|ZP_05792317.2| tRNA-I(6)A37 thiotransferase enzyme MiaB [Butyrivibrio crossotus DSM 2876] gi|292809090|gb|EFF68295.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Butyrivibrio crossotus DSM 2876] Length = 444 Score = 43.2 bits (101), Expect = 0.058, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 28/132 (21%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C +C +C + + S+ + +A I+ S EV+ TG Sbjct: 146 HTRAYVKIQDGCNRFCSYC-----IIPYVRGRIRSRKPDDVMAEIKRVAASGCKEVVLTG 200 Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 D S +L V++ + I+ ++ +R S ++P + E ++ L Sbjct: 201 IHLSSYGLDFKD----STVKLIDVIEAVNRIEGIERIRLGS----LEPLIVTEEFVRRLA 252 Query: 202 EAGKPVYIAIHA 213 + K I H Sbjct: 253 KCKK---ICPHF 261 >gi|323698700|ref|ZP_08110612.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio sp. ND132] gi|323458632|gb|EGB14497.1| nitrogenase cofactor biosynthesis protein NifB [Desulfovibrio desulfuricans ND132] Length = 422 Score = 43.2 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 28/182 (15%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAY----IQEKSQIWEVI 148 R+ L + C + C +C R+ ++ ++S + A Y ++++ +I Sbjct: 20 GRVHLPVAPKCNIQCNYCNRKYDCVNESRPGVTSGVLKPFQAAEYMEKVLEKEPRITVAG 79 Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIVDPQ----------RINPEL 196 G GDP + L+ L KH +++ + + P + + Sbjct: 80 IAGPGDPFANPAETLE--TMRLLNAKHPELIFCLSTNGMGILPYLDDIAELGVSHVTITI 137 Query: 197 IQCLKEAGKPVY-------IAIHANHPYEFSEEAI-AAISRLANAGIILLSQSVLLKGIN 248 G +Y + H E + AI L GI + S+++ GIN Sbjct: 138 SAVDPAIGAQIYAWVKDGNVVYHGEKGAEILLDRQLKAIKGLKERGITVKINSIVIPGIN 197 Query: 249 DD 250 D Sbjct: 198 DH 199 >gi|325847803|ref|ZP_08170025.1| tRNA methylthiotransferase YqeV [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480821|gb|EGC83874.1| tRNA methylthiotransferase YqeV [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 432 Score = 43.2 bits (101), Expect = 0.059, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 20/120 (16%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT-- 150 R +K+ C +YC +C ++S+D + + + + E++ T Sbjct: 142 TRAYIKIQDGCNMYCSYCLI-----PYARGNIASRDLVSIIDEAKRLRDNGFKEIVLTGI 196 Query: 151 -----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L L+ + V++ + I ++ +R S ++P+ I+ E +Q +K+ K Sbjct: 197 HVASYGKD-LDLNISLID-VIEHISKIDGIERIRLSS----MEPRHIDREFLQRMKDTKK 250 >gi|323476926|gb|ADX82164.1| Radical SAM domain protein [Sulfolobus islandicus HVE10/4] Length = 394 Score = 43.2 bits (101), Expect = 0.060, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 42/239 (17%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 + + +P+ L + EE ++ + + + L L + C C +CF++ Sbjct: 33 LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173 G +K +S K + YI++ + +V T GG+PL L ++++++ + L +K Sbjct: 91 ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 + S + + + ++ + L G + P E +E R Sbjct: 147 Y-------SFSVVTNGSLLTRKIAERLIPLGLTYAQIT-LDGPKEVHDE-----RRFFVR 193 Query: 234 G-----IILLS----Q---SVLLKGINDDPEILA---NLMRTFVELRI-----KPYYLH 272 G +I+ + Q V+L+ IN D + L L+ I P+ +H Sbjct: 194 GKGSFDVIVKNLKEVQDLIKVVLR-INIDVKNLTEIEELLDELKREGINKVRLDPHLVH 251 >gi|323474023|gb|ADX84629.1| Radical SAM domain protein [Sulfolobus islandicus REY15A] Length = 394 Score = 43.2 bits (101), Expect = 0.060, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 42/239 (17%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 + + +P+ L + EE ++ + + + L L + C C +CF++ Sbjct: 33 LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173 G +K +S K + YI++ + +V T GG+PL L ++++++ + L +K Sbjct: 91 ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 + S + + + ++ + L G + P E +E R Sbjct: 147 Y-------SFSVVTNGSLLTRKIAERLIPLGLTYAQIT-LDGPKEVHDE-----RRFFVR 193 Query: 234 G-----IILLS----Q---SVLLKGINDDPEILA---NLMRTFVELRI-----KPYYLH 272 G +I+ + Q V+L+ IN D + L L+ I P+ +H Sbjct: 194 GKGSFDVIVKNLKEVQDLIKVVLR-INIDVKNLTEIEELLDELKREGINKVRLDPHLVH 251 >gi|210623789|ref|ZP_03294049.1| hypothetical protein CLOHIR_02000 [Clostridium hiranonis DSM 13275] gi|210153371|gb|EEA84377.1| hypothetical protein CLOHIR_02000 [Clostridium hiranonis DSM 13275] Length = 465 Score = 43.2 bits (101), Expect = 0.060, Method: Composition-based stats. Identities = 51/245 (20%), Positives = 101/245 (41%), Gaps = 48/245 (19%) Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRRE 116 Q +E+ L EE ++N+ VHR P + L + H C + C++CF ++ Sbjct: 62 QVEEAWDEIANLEEEGL-LYTEDNYQFHPAFVHREPVVKALCLNVAHDCNLKCKYCFAKQ 120 Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYI- 172 K ++S + + AL ++ S ++ F GG+PL ++ + ++++++ R I Sbjct: 121 GNFGGKPELMSFEVGKRALDFLVANSGSRRNLDIDFFGGEPL-MNFEVVKQLVEYGRSIE 179 Query: 173 -KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231 +H + +RF + +N E+I + E V +++ + A++ Sbjct: 180 KEHGKNMRF---TITTNGLLLNDEIIDYINENMHNVVLSL----------DGRKAVNDNM 226 Query: 232 NAGIILLSQSVLLKGIND--DPEILANLMRTFVELRIKP----YYLH------HPDLAAG 279 IND +++ M+ VE R P YY+ + D + Sbjct: 227 RM------------TINDKGSYDVIVPKMQKLVEKR--PKDKYYYVRGTFTRENLDFSKD 272 Query: 280 TSHFR 284 HFR Sbjct: 273 ILHFR 277 >gi|182414976|ref|YP_001820042.1| radical SAM domain-containing protein [Opitutus terrae PB90-1] gi|177842190|gb|ACB76442.1| Radical SAM domain protein [Opitutus terrae PB90-1] Length = 351 Score = 43.2 bits (101), Expect = 0.060, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 40/102 (39%), Gaps = 10/102 (9%) Query: 93 YPDRILLKLLHVCPVYCRFCFRR------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 +P + + + C + C C + ++G L+++D I Sbjct: 5 FPAFVSFTVTNACNLRCAMCGQWSPAGYIRSGRGRRGHPLTAEDWMRLADEAAAH-GIKS 63 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH-VQILRFHSRVPIV 187 ++ GG+P +L +Q++L+ L + + I +R+ Sbjct: 64 ILLRGGEPFMLP--GIQRLLEHLHDLGMFISIDTNGTRLAAF 103 >gi|76809653|ref|YP_334300.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 1710b] gi|76579106|gb|ABA48581.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 1710b] Length = 370 Score = 43.2 bits (101), Expect = 0.060, Method: Composition-based stats. Identities = 34/197 (17%), Positives = 64/197 (32%), Gaps = 47/197 (23%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + G +L+ ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99 Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191 PL+ K L+ +++ L + V + LR SRV + Sbjct: 100 PLL--RKNLEFLIERLANMTTVDGRPLDITLTTNGSLLMRKAKSLRDAGLSRVTVSL--- 154 Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDD 250 L L + +H S + + I AG + V+ +G ND Sbjct: 155 --DALDDTLFKLR---------DHADFASADVLDGIFAAHAAGLAPVKVNMVVKRGTND- 202 Query: 251 PEILANLMRTFVELRIK 267 + + R F + Sbjct: 203 -AEIVPMARRFKGTGVV 218 >gi|295706646|ref|YP_003599721.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium DSM 319] gi|294804305|gb|ADF41371.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium DSM 319] Length = 452 Score = 43.2 bits (101), Expect = 0.061, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 11/124 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150 R LK+ C +C FC G + + + +I I T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVVAQAQQLVD--AGYKEIVLTGIHT 199 Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GG + L ++L+ L +K ++ +R S ++ +I E+I+ L ++ + V Sbjct: 200 GGYGEDMKDYNLAQLLRDLESQVKGLKRIRISS----IEASQITDEVIEVLDQS-EMVVR 254 Query: 210 AIHA 213 +H Sbjct: 255 HLHI 258 >gi|294501299|ref|YP_003564999.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium QM B1551] gi|294351236|gb|ADE71565.1| ribosomal protein S12 methylthiotransferase [Bacillus megaterium QM B1551] Length = 452 Score = 43.2 bits (101), Expect = 0.061, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 11/124 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150 R LK+ C +C FC G + + + +I I T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVVAQAQQLVD--AGYKEIVLTGIHT 199 Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GG + L ++L+ L +K ++ +R S ++ +I E+I+ L ++ + V Sbjct: 200 GGYGEDMKDYNLAQLLRDLESQVKGLKRIRISS----IEASQITDEVIEVLDQS-EMVVR 254 Query: 210 AIHA 213 +H Sbjct: 255 HLHI 258 >gi|256544964|ref|ZP_05472334.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Anaerococcus vaginalis ATCC 51170] gi|256399351|gb|EEU12958.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Anaerococcus vaginalis ATCC 51170] Length = 166 Score = 43.2 bits (101), Expect = 0.061, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 9/89 (10%) Query: 88 GIVHRYPD------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 G + +Y R + C C+ CF +E + G + + K T+ + Y+++ Sbjct: 4 GQIRKYDVANGPGIRTSFFVTG-CHANCKNCFNKEYMDPNFGNLWTDKQTQEIITYLKKD 62 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +I + GG+P S + L K++K +R Sbjct: 63 -EIEGLTILGGEPFE-STEDLIKIVKKIR 89 >gi|153852905|ref|ZP_01994342.1| hypothetical protein DORLON_00324 [Dorea longicatena DSM 13814] gi|149754547|gb|EDM64478.1| hypothetical protein DORLON_00324 [Dorea longicatena DSM 13814] Length = 481 Score = 43.2 bits (101), Expect = 0.061, Method: Composition-based stats. Identities = 39/195 (20%), Positives = 71/195 (36%), Gaps = 52/195 (26%) Query: 56 IARQFIPQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 I + P EE L + +E +D +G + G++ Y C C FCF Sbjct: 65 IRK---PSGEEWLLEIDKEYDDELGVEFEN---GLMSEYR---------SCSNKCMFCFI 109 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 +M + T+ Y ++ + F G+ + +++ + + I H Sbjct: 110 DQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITMTNMKQADI----DRIIH 152 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG 234 +Q+ PI + ++C +H F+ E + + L A Sbjct: 153 MQL------APINISVQTTNPELRC---------KMLH----NRFAGEKLKFLQDLYEAH 193 Query: 235 IILLSQSVLLKGIND 249 I + Q VL KG+ND Sbjct: 194 IEMNGQIVLCKGVND 208 >gi|315651093|ref|ZP_07904127.1| radical SAM domain protein [Eubacterium saburreum DSM 3986] gi|315486683|gb|EFU77031.1| radical SAM domain protein [Eubacterium saburreum DSM 3986] Length = 351 Score = 43.2 bits (101), Expect = 0.061, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 51/166 (30%), Gaps = 33/166 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-------IFTG 151 + C C+ C+ + L S + E TG Sbjct: 9 WHITDECDQRCKHCY---IFSGGNYNCLKSMSWQEMQDTFNNCLDFCETYGRTPYFYLTG 65 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA- 210 GDP++ L L +++ + +P +N ++ + LKE G Y Sbjct: 66 GDPILHPD---FWKLLELFSENNIKF------TIMGNPFHLNDDVCKKLKEYGCEKYQMS 116 Query: 211 ------IH--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 H P + + I L AGI SV++ ++ Sbjct: 117 IDGIRETHDWFRKPGSYDC-TLEKIGCLNKAGIR----SVIMTTVS 157 >gi|311069144|ref|YP_003974067.1| YqeV protein [Bacillus atrophaeus 1942] gi|310869661|gb|ADP33136.1| YqeV [Bacillus atrophaeus 1942] Length = 451 Score = 43.2 bits (101), Expect = 0.061, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G +L S+D E + Q+ + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196 Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + K+L+ L + ++ +R S ++ +I E+I+ L + Sbjct: 197 IHTGGYGED---MKDYNFAKLLRELDARVDGLKRIRISS----IEASQITDEVIEVLDRS 249 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 250 DK-IVRHLHI 258 >gi|86604900|ref|YP_473663.1| molybdenum cofactor biosynthesis protein A [Synechococcus sp. JA-3-3Ab] gi|86553442|gb|ABC98400.1| molybdenum cofactor biosynthesis protein A [Synechococcus sp. JA-3-3Ab] Length = 312 Score = 43.2 bits (101), Expect = 0.062, Method: Composition-based stats. Identities = 35/165 (21%), Positives = 64/165 (38%), Gaps = 27/165 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + L C + CR+C K + L+ + + + + + I EV TGG+PL+ Sbjct: 16 VSLTDQCNLRCRYCMPLHPEFLDKSSYLTPQQYKEIIGELLDY-GIEEVRITGGEPLVRQ 74 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 +V++ L +K + L + ++ R L +A + + + Sbjct: 75 D--FDEVIQELAKLK-IPSLSLTTNGLLL--HRYWDVL-----KAANVLNLNVSL---DS 121 Query: 219 FSEEAIAAISR-------LAN------AGIILLSQSVLLKGINDD 250 AAI+R L N G L +V+++GIND Sbjct: 122 LQPSTQAAIARRDCLADILRNIQEGIARGFSLKVNTVVMRGINDC 166 >gi|221198572|ref|ZP_03571617.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans CGD2M] gi|221207801|ref|ZP_03580808.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans CGD2] gi|221172298|gb|EEE04738.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans CGD2] gi|221181023|gb|EEE13425.1| molybdenum cofactor biosynthesis protein A [Burkholderia multivorans CGD2M] Length = 367 Score = 43.2 bits (101), Expect = 0.062, Method: Composition-based stats. Identities = 38/195 (19%), Positives = 72/195 (36%), Gaps = 45/195 (23%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQE---KSQIWEVIFTGGDP 154 L ++ C C +C RE+ GS + + A L I + ++ TGG+P Sbjct: 39 LSVIDRCNFRCGYCMPREIFGSDYAFMPPADRLSFAQLERIARAFVSLGVEKIRITGGEP 98 Query: 155 LILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQRI 192 L+ + L+ +++ L + V + LR +RV + + Sbjct: 99 LL--RRHLETLIERLAALTTVHGRPVELALTTNGALLAAKARTLRDAGLARVTVSL-DAL 155 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDP 251 + + + + +A PV + A I AG + +V+ +G NDD Sbjct: 156 DDAVFRRMSDADVPVSRVL-------------AGIEAAQAAGLAPVKVNAVIERGANDD- 201 Query: 252 EILANLMRTFVELRI 266 + L+R F + Sbjct: 202 -QMLPLVRHFRHTGV 215 >gi|218883344|ref|YP_002427726.1| Fe-S oxidoreductase family protein [Desulfurococcus kamchatkensis 1221n] gi|218764960|gb|ACL10359.1| Fe-S oxidoreductase family protein [Desulfurococcus kamchatkensis 1221n] Length = 439 Score = 43.2 bits (101), Expect = 0.062, Method: Composition-based stats. Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 28/157 (17%) Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL--LKLLHVCPVYCRFCFRREMVGSQ 121 +EE ++ R PI + H P Y RI+ L++ CP C +C V Sbjct: 143 REEDKVIATGRARPIDLDKHDPFP-----YWRRIINPLEITRGCPYGCLYC----QVSYI 193 Query: 122 KGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLI-------------LSHKRLQKVL 166 G + E + Y++E ++I + F D L L + L + Sbjct: 194 HGMSYRHRSIEKIVFYVKEMARIGVRDYRFITPDSLSYGLTKISREPDTGLIEELLSSIH 253 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 LR I + + S V P+ +N ++++ L++ Sbjct: 254 SALRSIG--GRIFYGSFPSEVRPEHVNKDVVRVLRKY 288 >gi|14520330|ref|NP_125805.1| molybdenum cofactor biosynthesis protein A [Pyrococcus abyssi GE5] gi|18203544|sp|Q9V2G2|MOAA_PYRAB RecName: Full=Probable molybdenum cofactor biosynthesis protein A gi|5457545|emb|CAB49036.1| moaA molybdenum cofactor biosynthesis protein [Pyrococcus abyssi GE5] Length = 306 Score = 43.2 bits (101), Expect = 0.062, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 67/174 (38%), Gaps = 32/174 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + L C + C +C R + + ++ E + I + I +V TGG+P I Sbjct: 15 ISLTKECNLNCFYCHREGQL--DGERTMKPEEIERIVR-IASRLGIKKVKLTGGEPTIRK 71 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-------------K 205 + ++++ +R +V L + + L + LKEAG K Sbjct: 72 D--IVEIIRRIR--PYVVDLSLTTNGTTLY------TLAEELKEAGLDRVNISLDTLDRK 121 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 + + ++ I I + + V+++GINDD + +L+R Sbjct: 122 KYKMITGFD----VLDQVIKGIEKATKLFYPVKLNMVVMRGINDD--EIWDLIR 169 >gi|254556403|ref|YP_003062820.1| molybdenum cofactor biosynthesis protein A [Lactobacillus plantarum JDM1] gi|254045330|gb|ACT62123.1| molybdenum cofactor biosynthesis protein A [Lactobacillus plantarum JDM1] Length = 332 Score = 43.2 bits (101), Expect = 0.063, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 10/115 (8%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R D + L + C + C +C +E + VLS + + + +V T Sbjct: 10 RLHDYVRLSITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLIENFAAM-GVSKVRIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 GG+PL+ + ++++ ++ + + + + +L + LKEAG Sbjct: 69 GGEPLLRTDVV--EIVRRIKAVDGINDVSITTNGL------FLAKLAKPLKEAGL 115 >gi|28378196|ref|NP_785088.1| molybdenum cofactor biosynthesis protein A [Lactobacillus plantarum WCFS1] gi|38258047|sp|Q88WY1|MOAA_LACPL RecName: Full=Molybdenum cofactor biosynthesis protein A gi|28271031|emb|CAD63936.1| molybdopterin precursor synthase MoaA [Lactobacillus plantarum WCFS1] Length = 332 Score = 43.2 bits (101), Expect = 0.063, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 10/115 (8%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R D + L + C + C +C +E + VLS + + + +V T Sbjct: 10 RLHDYVRLSITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLIENFAAM-GVSKVRIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 GG+PL+ + ++++ ++ + + + + +L + LKEAG Sbjct: 69 GGEPLLRTDVV--EIVRRIKAVDGINDVSITTNGL------FLAKLAKPLKEAGL 115 >gi|320450824|ref|YP_004202920.1| coenzyme PQQ synthesis protein PqqE [Thermus scotoductus SA-01] gi|320150993|gb|ADW22371.1| coenzyme PQQ synthesis protein PqqE [Thermus scotoductus SA-01] Length = 375 Score = 43.2 bits (101), Expect = 0.063, Method: Composition-based stats. Identities = 40/222 (18%), Positives = 79/222 (35%), Gaps = 39/222 (17%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 +YP + ++ + C + CR C M G LS+++ + + ++ TG Sbjct: 8 QYPYLVAWEVTNACLLACRHCRASAMPHPLPGE-LSTEEGLGLIEEVATYRPKPLLLLTG 66 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQCLKEAGK-PV 207 GDPL L +++ R +V P P + E + LKEAG + Sbjct: 67 GDPLARPD--LLFLIQRARE--------LGLKVGLTPAATP-LLTREKVFQLKEAGVTRL 115 Query: 208 YIAIHANHPYE---FSEE------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 +++ P F E +AA+ AG+ + + + ++ + L Sbjct: 116 ALSLDGASPKSHDAFRGEEGTFARTLAALGWAKEAGLPTQVNTTVTR---ENWPEIQALP 172 Query: 259 RTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 E + + L F + + G ++ L + Sbjct: 173 DLLAEKGVVLWSLF----------FLVPVGRG-ALLKQLSAR 203 >gi|317489825|ref|ZP_07948322.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA] gi|316911074|gb|EFV32686.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA] Length = 334 Score = 43.2 bits (101), Expect = 0.063, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 76/215 (35%), Gaps = 47/215 (21%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C + C C++ LS ++ + + I + +IF+GG+PL+ Sbjct: 3 VSWMTTNKCNLKCVHCYQDAE--EATDKELSCEEGKKMIDEIAR-AGFKVMIFSGGEPLM 59 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG--------KP 206 + +++ + LR P+ I PE+ LKEAG Sbjct: 60 RPD--IYELVAHAAS----RGLR-----PVFGSNGTLITPEVAVRLKEAGACAMGISVDS 108 Query: 207 VYIAIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRT 260 + H H Y+ + I A AG+ Q L + D + + + ++ Sbjct: 109 LDAVKHDRFRGLEHAYDLTMAGIEAC---KQAGLPF--Q--LHTTVVDWNRDEVCDITDF 161 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 VE+ +Y+ F + + G+ I Sbjct: 162 AVEIGAMAHYVF----------FLIPVGRGKFIQE 186 >gi|282883211|ref|ZP_06291810.1| protein YqeV [Peptoniphilus lacrimalis 315-B] gi|281297023|gb|EFA89520.1| protein YqeV [Peptoniphilus lacrimalis 315-B] Length = 431 Score = 43.2 bits (101), Expect = 0.063, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 48/117 (41%), Gaps = 21/117 (17%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQIWEVIF 149 H+ R +K+ C YC +C +GT+ S + + I+ + E+I Sbjct: 143 HK--TRSYMKVQDGCNRYCTYCIIPY----ARGTIRSRRIGDCVREAIRLANAGYKEIIL 196 Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 T G D L RL +++ + + ++ +R S V+P I+ + ++ Sbjct: 197 TGIHVGSYGVD---LGPVRLIDLIEAIAEVDGIERIRLSS----VEPNIISEDFMRR 246 >gi|229019959|ref|ZP_04176752.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1273] gi|229026193|ref|ZP_04182557.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1272] gi|228735121|gb|EEL85752.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1272] gi|228741343|gb|EEL91550.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1273] Length = 339 Score = 43.2 bits (101), Expect = 0.063, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRITGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIARLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDIFRNINGRNINTKPVIKGIKAAKEAGLEVKVNMVVKKGMNDH 177 >gi|225567883|ref|ZP_03776908.1| hypothetical protein CLOHYLEM_03956 [Clostridium hylemonae DSM 15053] gi|225163361|gb|EEG75980.1| hypothetical protein CLOHYLEM_03956 [Clostridium hylemonae DSM 15053] Length = 307 Score = 43.2 bits (101), Expect = 0.064, Method: Composition-based stats. Identities = 32/184 (17%), Positives = 66/184 (35%), Gaps = 31/184 (16%) Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAIHA 213 L+++ V+I+ +R P ++ ++I L++ KPV++ + Sbjct: 98 YAPLPYLRRIFTEAARHPDVRIISIATR-----PDCLDKDVISMLEDIRRIKPVWVELGL 152 Query: 214 NHPYEFS----------EEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRTFV 262 +E + A + L +AGI ++ ++L L G +D ++ + + Sbjct: 153 QTIHEETAAFIGRGYSLPVFEQAAAMLQDAGIDVIVHTILALPG--EDLSMMLDTLHYLN 210 Query: 263 ELRI---KPYYLHHPDLAAGTSH-----FRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 I K LH A ++ F + + L + G P +L Sbjct: 211 GAGIQGLKLQLLHVLRGTALAAYYEAHPFWIP---SMEEYFYLLGRCIGSISPDIVLHRL 267 Query: 315 GGYG 318 G G Sbjct: 268 TGDG 271 >gi|333029185|ref|ZP_08457246.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides coprosuis DSM 18011] gi|332739782|gb|EGJ70264.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides coprosuis DSM 18011] Length = 153 Score = 43.2 bits (101), Expect = 0.064, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 7/82 (8%) Query: 88 GIVHRYPDRILL-------KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 I+H Y + I+ CP C C E + GT+L+ + + + I Sbjct: 2 NILHTYSETIVDGDGIRYSIYFAGCPHRCVGCHNPESRNPKAGTLLTDEKLDKIIDEINN 61 Query: 141 KSQIWEVIFTGGDPLILSHKRL 162 + + +GGDP + L Sbjct: 62 NPLLDGITLSGGDPFFNPIEML 83 >gi|110799003|ref|YP_694570.1| thiamine biosynthesis protein ThiH [Clostridium perfringens ATCC 13124] gi|110673650|gb|ABG82637.1| putative thiazole biosynthesis protein ThiH [Clostridium perfringens ATCC 13124] Length = 473 Score = 43.2 bits (101), Expect = 0.064, Method: Composition-based stats. Identities = 46/236 (19%), Positives = 81/236 (34%), Gaps = 41/236 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + K L+ + + ++ + G DP+ Sbjct: 91 LYVSNYCVNNCTYCGYKHCNDELKRKKLNKEQLIEEVKVLESLGHKRIALEAGEDPVNAP 150 Query: 159 HKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKE------------ 202 L +L ++ I ++ +R R+ + + + LK+ Sbjct: 151 ---LDYILDCIKSIYSIKFDNGSIR---RINVNIAATSVEDY-KRLKDAEIGTYILFQET 203 Query: 203 AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF 261 KP Y +H + P A+ R AGI + V L G+ D E LA LM Sbjct: 204 YHKPTYERLHVSGPKHNYNYHTTAMHRAREAGIDDIGMGV-LYGLYDYKYETLAMLMHAM 262 Query: 262 V---ELRIKPYYLHHPDLAAGTSH-------FRLTIEEGQKIVASLKEKISGLCQP 307 + P+ L P + + + E+ +KIVA L+ L P Sbjct: 263 DLEETTGVGPHTLSVPR-IRPAENVSLENYPYLVDDEDFKKIVAILR-----LAVP 312 >gi|310780511|ref|YP_003968843.1| ribonucleoside-triphosphate reductase class III activase subunit [Ilyobacter polytropus DSM 2926] gi|309749834|gb|ADO84495.1| ribonucleoside-triphosphate reductase class III activase subunit [Ilyobacter polytropus DSM 2926] Length = 166 Score = 43.2 bits (101), Expect = 0.065, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 1/72 (1%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C YC+ C E G VL + ++ I + V +GGDP + + L Sbjct: 24 SGCSHYCQGCHNPETWKGDIGEVLDETYMKKIISQISNNPLLDGVTLSGGDPFFIPEELL 83 Query: 163 QKVLKTLRYIKH 174 L+ L+ H Sbjct: 84 G-FLRRLKEETH 94 >gi|300858354|ref|YP_003783337.1| coenzyme PQQ synthesis protein [Corynebacterium pseudotuberculosis FRC41] gi|300685808|gb|ADK28730.1| coenzyme PQQ synthesis protein [Corynebacterium pseudotuberculosis FRC41] gi|302206071|gb|ADL10413.1| Predicted Fe-S oxidoreductase [Corynebacterium pseudotuberculosis C231] Length = 412 Score = 43.2 bits (101), Expect = 0.065, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 80/226 (35%), Gaps = 50/226 (22%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-V 147 I H+ P + ++ C + C+ C G + + + A L + + V Sbjct: 34 INHK-PFIAIWEVTRACGLVCKHCRADAQHKPHPGQLTTKQGF-ALLKDLASYDKPRPLV 91 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCL 200 + TGGDP + L+++++ + ++ P V P R+ E I L Sbjct: 92 VLTGGDPF--EREDLEELVE------------YGTQQGLSVSLSPSVTP-RLTSERIHRL 136 Query: 201 KEA-GKPVYIAIHANHPY----------EFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 + GK + +++ F A + +AG L S L K + Sbjct: 137 HDLGGKAMSMSLDGATAQTHDAFRGFSGTFDATVSMA-QTILDAGFRLQINSTLTK---N 192 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 + L++T +E+ K +Y+ F + G + A Sbjct: 193 NIREAPLLLKTVMEMGAKMWYVF----------FLVPTGRGAALHA 228 >gi|160879625|ref|YP_001558593.1| molybdenum cofactor biosynthesis protein A [Clostridium phytofermentans ISDg] gi|160428291|gb|ABX41854.1| molybdenum cofactor biosynthesis protein A [Clostridium phytofermentans ISDg] Length = 332 Score = 43.2 bits (101), Expect = 0.065, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 59/160 (36%), Gaps = 20/160 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C ++ + ++L+ ++ I ++ TGG+P++ Sbjct: 14 ISITDRCNLRCTYCMPEDVEKLEHESILTYEEILRICKS-ASSLGIRKIKITGGEPMVRK 72 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA---GKPVYIAI---- 211 K++ ++ I ++ + + + E ++ L + G V + Sbjct: 73 DAV--KLMANIKAIPGIEFVTLTTNGV------LLEEHVEELAKIPLDGVNVSLDTLNTD 124 Query: 212 ---HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 EF + I +L AGI V KG+N Sbjct: 125 TFKKITRRDEFLK-VWNGIQKLIEAGIPTKINCVPQKGVN 163 >gi|292670086|ref|ZP_06603512.1| radical SAM domain protein [Selenomonas noxia ATCC 43541] gi|292648274|gb|EFF66246.1| radical SAM domain protein [Selenomonas noxia ATCC 43541] Length = 346 Score = 43.2 bits (101), Expect = 0.066, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 4/74 (5%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159 + C +YC C+R G + LS+++ + L I + + +IF+GG+PL Sbjct: 21 TTNACNMYCAHCYRDA--GCRAEEELSTEEAKKLLREIAK-AGFRIMIFSGGEPLTRPDI 77 Query: 160 KRLQKVLKTLRYIK 173 L + L I Sbjct: 78 LELVSYARGLGLIP 91 >gi|238059271|ref|ZP_04603980.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149] gi|237881082|gb|EEP69910.1| coproporphyrinogen III oxidase [Micromonospora sp. ATCC 39149] Length = 399 Score = 43.2 bits (101), Expect = 0.066, Method: Composition-based stats. Identities = 36/169 (21%), Positives = 57/169 (33%), Gaps = 31/169 (18%) Query: 94 PDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWE 146 P L +HV C + C FC G+ V + + E + + Sbjct: 43 PRDALFLYVHVPFCEMRCGFCNLFTRTGAPAEQVTAYLRQLRRQAERVADALGGDPRHAR 102 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCL 200 V F GG P L+ L ++ + +R+P V P P+ + L Sbjct: 103 VAFGGGTPTYLTAGELTELFD-------IATSTLGARLPGVPLSVETSPATATPDRLAVL 155 Query: 201 KEAG-KPVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLS 239 G V I + A P + E AA+ + +A I LL+ Sbjct: 156 AAHGATRVSIGVQSFLDAEARAAGRPQRRT-EVEAALGAIRDAAIPLLN 203 >gi|78222094|ref|YP_383841.1| MiaB-like tRNA modifying enzyme [Geobacter metallireducens GS-15] gi|78193349|gb|ABB31116.1| MiaB-like tRNA modifying enzyme [Geobacter metallireducens GS-15] Length = 431 Score = 43.2 bits (101), Expect = 0.066, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 45/127 (35%), Gaps = 17/127 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R L++ + C +C +C G + S + A + + EV+ T Sbjct: 140 HTRAFLQVQNGCDAFCSYCIVPYARGRSRSVSFS--EALAGIRNFAAQ-GFREVVLTGIH 196 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 G D + L +L+ K V LR S V+P + L+ L + + Sbjct: 197 LGAYGLD--LAPPTNLLALLEASEAEKAVPRLRVGS----VEPNELTDALVDFLARS-ET 249 Query: 207 VYIAIHA 213 V +H Sbjct: 250 VCPHLHI 256 >gi|284996927|ref|YP_003418694.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5] gi|284444822|gb|ADB86324.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5] Length = 394 Score = 43.2 bits (101), Expect = 0.066, Method: Composition-based stats. Identities = 42/234 (17%), Positives = 93/234 (39%), Gaps = 32/234 (13%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 + + +P+ L + EE ++ + + + L L + C C +CF++ Sbjct: 33 LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173 G +K +S K + YI++ + +V T GG+PL L ++++++ + L +K Sbjct: 91 ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 + S + + + ++ + L G + P E ++ + + Sbjct: 147 Y-------SFSVVTNGSLLTRKIAERLISLGLTYAQIT-LDGPKEVHDKRRFFVRGRGSF 198 Query: 234 GIILLS----Q---SVLLKGINDDPEILA---NLMRTFVELRI-----KPYYLH 272 +I+ + Q V+L+ IN D + L L+ I P+ +H Sbjct: 199 DVIVKNLKEVQDLIKVVLR-INIDVKNLTEIEELLDELKREGINKVRLDPHLVH 251 >gi|241676232|ref|XP_002400329.1| molybdenum cofactor biosynthesis pathway protein, putative [Ixodes scapularis] gi|215504220|gb|EEC13714.1| molybdenum cofactor biosynthesis pathway protein, putative [Ixodes scapularis] Length = 381 Score = 43.2 bits (101), Expect = 0.066, Method: Composition-based stats. Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 13/123 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R + + L C + C +C E V L S D LA + + +V TG Sbjct: 62 RKHSYLRISLTEKCSLRCVYCMPAEGVPLTPNEKLLSSDEIVHLATLFATFGVNKVRLTG 121 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+PL+ +++ L I ++ L + + + LK+AG Sbjct: 122 GEPLVRKDTL--DIVEKLSQIPQLETLGMTTNGLV------LSRKLADLKKAGL-----T 168 Query: 212 HAN 214 H N Sbjct: 169 HLN 171 >gi|300813542|ref|ZP_07093873.1| MiaB-like protein [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300512290|gb|EFK39459.1| MiaB-like protein [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 431 Score = 43.2 bits (101), Expect = 0.067, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 21/117 (17%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQIWEVIF 149 H+ R +K+ C YC +C + +GT+ S + + I+ + E+I Sbjct: 143 HK--TRSYMKVQDGCNRYCTYCI----IPYARGTIRSRRIGDCVREAIRLANAGYKEIIL 196 Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 T G D L RL +++ + + ++ +R S V+P I+ + ++ Sbjct: 197 TGIHVGSYGVD---LGPVRLIDLIEAIAEVDGIERIRLSS----VEPNIISEDFMRR 246 >gi|89097965|ref|ZP_01170852.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. NRRL B-14911] gi|89087467|gb|EAR66581.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. NRRL B-14911] Length = 309 Score = 43.2 bits (101), Expect = 0.067, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 32/146 (21%) Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL--- 178 K +LS ++ E + + I + TGG+PL+ L ++++ L I V + Sbjct: 15 KDQLLSFEEIEKLASVFAKAFGIQKFRLTGGEPLMRKD--LPQLVEKLSSIPGVDDIAMT 72 Query: 179 -------RF-------HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI 224 R+ R + ++ EL + G V ++ + Sbjct: 73 TNGILLPRYAKELKSAGLRRVSISLDSLDDELFGKINGRGIKV-------------DQVL 119 Query: 225 AAISRLANAGIILLSQSVLLKGINDD 250 I A AG+ + V+ KG+ND Sbjct: 120 KGIDAAAEAGLKVKINMVVQKGVNDH 145 >gi|119356260|ref|YP_910904.1| RNA modification protein [Chlorobium phaeobacteroides DSM 266] gi|119353609|gb|ABL64480.1| RNA modification enzyme, MiaB family [Chlorobium phaeobacteroides DSM 266] Length = 446 Score = 43.2 bits (101), Expect = 0.067, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 51/150 (34%), Gaps = 25/150 (16%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R LK+ C C +C R +++ A Y E++ Sbjct: 146 RTRAFLKIQDGCDYGCAYCTIPFARGRSRSFSPDDIIAQASALVASGY-------REIVL 198 Query: 150 TG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG GD RL +L+ L + V +R S ++P ++ LI + + Sbjct: 199 TGVNIGD-YRYRGVRLAALLRMLEKVP-VARIRISS----IEPDILDDALIAVVAASE-- 250 Query: 207 VYIAIHANHPYE--FSEEAIAAISRLANAG 234 IA H + P + A R AG Sbjct: 251 -IIAPHFHLPLQSGSDAVLRAMCRRYDTAG 279 >gi|212550840|ref|YP_002309157.1| hypothetical protein CFPG_483 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212549078|dbj|BAG83746.1| conserved hypothetical protein [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 477 Score = 43.2 bits (101), Expect = 0.067, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 51/116 (43%), Gaps = 13/116 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDPLI 156 ++ C C +C + +KG +S + + I E I ++ F GG+PL Sbjct: 92 MIVPTVRCNSNCIYCQASKKNLIEKGFDMSKGIAKKIVKMIFESPSSIIKIEFQGGEPLT 151 Query: 157 LSHKRLQKVLKTLRYI-----KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + + +Q +++ +I KH++ + + + I P++++ LK+ + Sbjct: 152 -NFEMVQYIMEEAEWINLFKKKHLEFV-ICTNI-----SLITPKILRYLKKHKCHI 200 >gi|331084033|ref|ZP_08333140.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Lachnospiraceae bacterium 6_1_63FAA] gi|330402395|gb|EGG81965.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Lachnospiraceae bacterium 6_1_63FAA] Length = 491 Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 68/156 (43%), Gaps = 20/156 (12%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 + + I + D I + P++ +YP + + ++ C +C +C + G ++ Sbjct: 172 LSDRMIIDIWKDTDKIVE--DLPVE---RKYPFKSGVNIMFGCNNFCSYCIVPYVRGRER 226 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQ 176 + KD + + + + EV+ G + + K L + +L + I+ ++ Sbjct: 227 SR--NPKDIVREIERLVKD-GVVEVMLLGQN-VNSYGKNLDEPMTFAQLLTEIEKIEGLK 282 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 +RF + P+ ++ ELI+ +K + K + +H Sbjct: 283 RIRFMTSH----PKDLSDELIEVMKNS-KKICKHLH 313 >gi|313900870|ref|ZP_07834360.1| iron-only hydrogenase maturation rSAM protein HydE [Clostridium sp. HGF2] gi|312954290|gb|EFR35968.1| iron-only hydrogenase maturation rSAM protein HydE [Clostridium sp. HGF2] Length = 362 Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats. Identities = 38/204 (18%), Positives = 62/204 (30%), Gaps = 43/204 (21%) Query: 90 VHRYP-----DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 HRY R L++ + C C +C R + L +D Sbjct: 46 AHRYYGNKVYTRGLIEFSNYCRNDCYYCGIRRSNSHAQRYRLKKEDILTCCDEGYNLGFR 105 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA- 203 V+ +G D + + L +++ ++ R P I L + KE+ Sbjct: 106 TFVLQSGEDGYY-TDELLIEIITDIKR-----------RYPDCA---ITLSLGEKEKESY 150 Query: 204 -------------GKPVYIAIHAN--HPYEFSEEAIAAISRLANA-------GIILLSQS 241 A H HP E + E + A GI++ S S Sbjct: 151 QCYYDAGADRYLLRHETSNAQHYRCLHPKELTSEHRKQCLKDLKAIGFQTGCGIMVGSPS 210 Query: 242 VLLKGINDDPEILANLMRTFVELR 265 LK I +D + L V + Sbjct: 211 QTLKHIVEDLHFMKELQPEMVGIG 234 >gi|238927734|ref|ZP_04659494.1| radical SAM [Selenomonas flueggei ATCC 43531] gi|238884450|gb|EEQ48088.1| radical SAM [Selenomonas flueggei ATCC 43531] Length = 384 Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159 + + C +YC C+R G + LS+++ + L I + + +IF+GG+PL Sbjct: 59 VTNACNMYCAHCYRDA--GCRADEELSTEEGKKLLREIAK-AGFRIMIFSGGEPLSRPDI 115 Query: 160 KRLQKVLKTLRYIK 173 L + L I Sbjct: 116 IELVAYARGLGLIP 129 >gi|269797767|ref|YP_003311667.1| radical SAM protein [Veillonella parvula DSM 2008] gi|269094396|gb|ACZ24387.1| Radical SAM domain protein [Veillonella parvula DSM 2008] Length = 399 Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 30/167 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155 CP C FC + + G + L+ + + + Y+ + + WEV F GG Sbjct: 10 FIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWEVAFYGG-SF 68 Query: 156 ILSHKRLQK-VLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210 K LQ +L + + +R +R P + E I L+ G K V + Sbjct: 69 TAIIKDLQHKLLMPAYEMLQQGLIDGIRCSTR-----PDAVGDEAITLLQSYGVKTVELG 123 Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 + + H + E + A++RL + + + Q LL G Sbjct: 124 VQSMNDGILVDAKRGHTAQ---EVVEAVTRLKHRDMTVGVQ--LLPG 165 >gi|154148690|ref|YP_001406630.1| hypothetical protein CHAB381_1072 [Campylobacter hominis ATCC BAA-381] gi|153804699|gb|ABS51706.1| conserved hypothetical protein [Campylobacter hominis ATCC BAA-381] Length = 414 Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 51/130 (39%), Gaps = 16/130 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQI----W 145 + + +K+ C C +C + G + L ++ + +A ++I Sbjct: 130 KSHTKAFIKIQEGCDFNCSYCIIPSVRGKSRSVDENLIIEEVKKIIA--GNHTEIVLTGT 187 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + G D + L ++L+ L I ++ +R S ++P +I+ + + L E Sbjct: 188 NIGSYGKD----NGSSLGELLQKLGKISGLKRIRLGS----IEPSQIDEKFREILDEPWL 239 Query: 206 PVYIAIHANH 215 ++ I H Sbjct: 240 EKHLHIALQH 249 >gi|326389860|ref|ZP_08211424.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus JW 200] gi|325994128|gb|EGD52556.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus JW 200] Length = 455 Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150 R +K+ C YC +C + + S+D + L ++ S E++ T Sbjct: 161 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 215 Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G D L + L ++K + I ++ +R S P E ++ + Sbjct: 216 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 268 Query: 205 K 205 K Sbjct: 269 K 269 >gi|307266431|ref|ZP_07547967.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter wiegelii Rt8.B1] gi|306918539|gb|EFN48777.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter wiegelii Rt8.B1] Length = 455 Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150 R +K+ C YC +C + + S+D + L ++ S E++ T Sbjct: 161 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 215 Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G D L + L ++K + I ++ +R S P E ++ + Sbjct: 216 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 268 Query: 205 K 205 K Sbjct: 269 K 269 >gi|256751980|ref|ZP_05492850.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus CCSD1] gi|320116201|ref|YP_004186360.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|256749185|gb|EEU62219.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter ethanolicus CCSD1] gi|319929292|gb|ADV79977.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 455 Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150 R +K+ C YC +C + + S+D + L ++ S E++ T Sbjct: 161 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 215 Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G D L + L ++K + I ++ +R S P E ++ + Sbjct: 216 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 268 Query: 205 K 205 K Sbjct: 269 K 269 >gi|167039974|ref|YP_001662959.1| MiaB-like tRNA modifying protein [Thermoanaerobacter sp. X514] gi|300914064|ref|ZP_07131380.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X561] gi|307724703|ref|YP_003904454.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X513] gi|166854214|gb|ABY92623.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X514] gi|300888999|gb|EFK84145.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X561] gi|307581764|gb|ADN55163.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter sp. X513] Length = 449 Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150 R +K+ C YC +C + + S+D + L ++ S E++ T Sbjct: 155 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 209 Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G D L + L ++K + I ++ +R S P E ++ + Sbjct: 210 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 262 Query: 205 K 205 K Sbjct: 263 K 263 >gi|167037786|ref|YP_001665364.1| MiaB-like tRNA modifying protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|166856620|gb|ABY95028.1| MiaB-like tRNA modifying enzyme [Thermoanaerobacter pseudethanolicus ATCC 33223] Length = 467 Score = 43.2 bits (101), Expect = 0.068, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 44/121 (36%), Gaps = 21/121 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT- 150 R +K+ C YC +C + + S+D + L ++ S E++ T Sbjct: 173 RTRAYIKIQDGCNQYCTYC-----IIPYARGPVRSRDPKKVLDEVKRFADSGYKEIVLTG 227 Query: 151 ------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G D L + L ++K + I ++ +R S P E ++ + Sbjct: 228 IHIASYGKD---LKNIGLLDIIKMIHEIDGIKRIRLSSIEPTFL----TEEFVKEIANLP 280 Query: 205 K 205 K Sbjct: 281 K 281 >gi|153951587|ref|YP_001397915.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. doylei 269.97] gi|152939033|gb|ABS43774.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. doylei 269.97] Length = 416 Score = 43.2 bits (101), Expect = 0.069, Method: Composition-based stats. Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 18/132 (13%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + +L + A Y E++ Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184 Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L + L K+L+ + I ++ +R S ++P +++ ++ L E Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQISGIKRIRLGS----LEPAQLDESFLEILDETWLE 240 Query: 207 VYIAIHANHPYE 218 ++ I H E Sbjct: 241 RHLHIALQHTSE 252 >gi|269837323|ref|YP_003319551.1| MiaB-like tRNA modifying enzyme [Sphaerobacter thermophilus DSM 20745] gi|269786586|gb|ACZ38729.1| MiaB-like tRNA modifying enzyme [Sphaerobacter thermophilus DSM 20745] Length = 449 Score = 43.2 bits (101), Expect = 0.069, Method: Composition-based stats. Identities = 27/156 (17%), Positives = 52/156 (33%), Gaps = 33/156 (21%) Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYI 138 ++ P++ + R R ++K+ C +C +C G+ + + + + A+ Sbjct: 137 DSDEPVEHVETR--TRRMIKIQEGCRAHCTYCIIPRARGAPRNVAPAEVVRRVQEAID-- 192 Query: 139 QEKSQIWEVIFTGGDPLILSHK------RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 EV+ TG RL +L+ + ++ LR S V P I Sbjct: 193 ---EGYREVVLTGTHVGTYKWPEGDRTLRLADLLELVLEATTIERLRVTS----VGPHEI 245 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 + I NHP + A+ Sbjct: 246 DERFIAL-------------VNHPR-MAPHLHMALQ 267 >gi|237737408|ref|ZP_04567889.1| molybdenum cofactor biosynthesis protein A [Fusobacterium mortiferum ATCC 9817] gi|229421270|gb|EEO36317.1| molybdenum cofactor biosynthesis protein A [Fusobacterium mortiferum ATCC 9817] Length = 324 Score = 43.2 bits (101), Expect = 0.069, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 72/166 (43%), Gaps = 26/166 (15%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C++C +++V K +LS ++ + I I ++ TGG+PL+ Sbjct: 14 LSITDRCNLRCKYCMGDKDIVFLPKDELLSVEEIGRVIK-IFSDLGIKKIRITGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP- 216 + + +++T+ I+ ++ + + R++ EL + LK+ + I + Sbjct: 72 -RRNFRDIVETINNIEDIEEINITTNGI-----RLSEEL-EFLKDKKIH-SLNISLDTLK 123 Query: 217 ----YEFS--EEAIAAISRLANAGIIL------LSQSVLLKGINDD 250 E + + + L A I L L+ VL++G ND Sbjct: 124 KDLFKEITGGGDLDKVLFSLHRA-IELKFKRIKLN-VVLVRGKNDS 167 >gi|237730471|ref|ZP_04560952.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2] gi|226906010|gb|EEH91928.1| coproporphyrinogen III oxidase [Citrobacter sp. 30_2] Length = 445 Score = 43.2 bits (101), Expect = 0.069, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 54/146 (36%), Gaps = 19/146 (13%) Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC--FR 114 R IP +EL + + + P R++ + C +C FC ++ Sbjct: 30 WRGAIPVAKELLSQTWQ------EVINQPTPP-----RKRLVYLHIPFCATHCTFCGFYQ 78 Query: 115 REMVGSQKGTVLSS--KDTE-AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 ++ ++ E A + + + + I V F GG P LS + L +++ LR Sbjct: 79 NRFEEDNCALYTNALLREIEMEADSALHQSAPIHAVYFGGGTPSALSAQDLARIITALRD 138 Query: 172 ---IKHVQILRFHSRVPIVDPQRINP 194 + + RV D RI+ Sbjct: 139 KLPLAPDCEITIEGRVLNFDDARIDA 164 >gi|303245617|ref|ZP_07331900.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio fructosovorans JJ] gi|302492880|gb|EFL52745.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio fructosovorans JJ] Length = 432 Score = 42.8 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 67/179 (37%), Gaps = 19/179 (10%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMV 118 EL+++P +G + +P P LK+ C CR+C R ++ Sbjct: 105 LPTELDLIPGRLATALGADADAPAGRRSSTPPSYAYLKIAEGCDHACRYCTIPAIRGKLA 164 Query: 119 GSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 +++ + + +Q +V G D + + L+ +L+ L + + Sbjct: 165 SRPIDGLITEAKGLIDQGARELVLVAQ--DVTAYGRDLGM--KEGLKALLEKLLPLPGLS 220 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISRLANA 233 LR + P + L+ L AG+P Y I H E +AA++R A Sbjct: 221 WLRL----LYLYPSGVTESLLSFLAGAGRPFVPYFDIPFQH---VHPEMLAAMARPKAA 272 >gi|121534710|ref|ZP_01666531.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1] gi|121306730|gb|EAX47651.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1] Length = 327 Score = 42.8 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 40/214 (18%), Positives = 83/214 (38%), Gaps = 32/214 (14%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 C + C C+R G+++ L++ + + L I + + +I +GG+PL+ Sbjct: 7 TTQACNINCLHCYRDA--GAKRADELTTAEGKKLLGEIAK-AGFKIMILSGGEPLLRPD- 62 Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVY-IAI------ 211 + ++++ R + LR + ++ P E+ + LK+AG V I+I Sbjct: 63 -IYELIRHARAVG----LRPVIGTNGTLIAP-----EVAKKLKDAGLAVAGISIDSLDRS 112 Query: 212 HANHPYEFSEE---AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 H +H S + I AG+ + + + + + VEL Sbjct: 113 HHDHFRGCSGAWEQTLRGIEACRQAGLPFQIHTTVTSW---NEHEILAITDKAVELGAIA 169 Query: 269 YYLHHPDLA-AGTSHFRLTIEEGQKIVASLKEKI 301 +++ G T++ Q +L E+I Sbjct: 170 HHIFFLVPTGRGKDIEDTTLKTAQ--YEALLERI 201 >gi|86152771|ref|ZP_01070976.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni HB93-13] gi|121612428|ref|YP_001000685.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni 81-176] gi|167005607|ref|ZP_02271365.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni 81-176] gi|85843656|gb|EAQ60866.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249241|gb|EAQ72202.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni 81-176] Length = 416 Score = 42.8 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 18/132 (13%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + +L + A Y E++ Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184 Query: 150 TGGD--PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L + L K+L+ + I ++ +R S ++P +++ ++ L EA Sbjct: 185 TGTNIGSYGLKNGTSLGKLLQKMGQISGIKRIRLGS----LEPAQLDESFLEILDEAWLE 240 Query: 207 VYIAIHANHPYE 218 ++ I H E Sbjct: 241 RHLHIALQHTSE 252 >gi|329725446|gb|EGG61929.1| tRNA methylthiotransferase YqeV [Staphylococcus epidermidis VCU144] Length = 448 Score = 42.8 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + K E A + S E++ TG Sbjct: 142 RTRDSLKIQEGCNNFCTFCIIPWARGLMR-SRDPEKVVEQATQLV--NSGYKEIVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L + L ++L+ L I+ ++ +R S ++ ++ E+I + + K Sbjct: 199 TGGYGQD---LKNYNLAQLLRDLDTIEGLERIRISS----IEASQLTDEVIDVIGNSNK- 250 Query: 207 VYIAIHA 213 V +H Sbjct: 251 VVRHLHI 257 >gi|322807272|emb|CBZ04846.1| miab family protein, possibly involved in tRNA or rRNAmodification [Clostridium botulinum H04402 065] Length = 432 Score = 42.8 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 21/133 (15%) Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIW 145 + Y D R LK+ C +C +C ++ +G V S K E + ++ K Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKK-PEKIMEEVKKLSKHGFK 189 Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 E+I +G D L +L+ + ++ ++ +R S +DP E I + Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245 Query: 201 KEAGKPVYIAIHA 213 + + H Sbjct: 246 SKLKR---FCPHF 255 >gi|168179386|ref|ZP_02614050.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC 2916] gi|182669715|gb|EDT81691.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC 2916] Length = 432 Score = 42.8 bits (100), Expect = 0.071, Method: Composition-based stats. Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 21/133 (15%) Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIW 145 + Y D R LK+ C +C +C ++ +G V S K E + ++ K Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKK-PEKIMEEVKKLSKHGFK 189 Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 E+I +G D L +L+ + ++ ++ +R S +DP E I + Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245 Query: 201 KEAGKPVYIAIHA 213 + + H Sbjct: 246 SKLKR---FCPHF 255 >gi|15669097|ref|NP_247902.1| chondro-6-sulfatase regulatory protein [Methanocaldococcus jannaschii DSM 2661] gi|3334424|sp|Q58317|Y907_METJA RecName: Full=Uncharacterized protein MJ0907 gi|1591581|gb|AAB98909.1| chondro-6-sulfatase regulatory protein isolog [Methanocaldococcus jannaschii DSM 2661] Length = 286 Score = 42.8 bits (100), Expect = 0.072, Method: Composition-based stats. Identities = 17/82 (20%), Positives = 37/82 (45%), Gaps = 10/82 (12%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 + G+ H ++LK+ + C + C +C+ + A+ Y+ Sbjct: 2 VDGMKH-----LILKVTNRCNLNCIYCYANNKNNKDMDFKTAK----NAIDYLLNLDNQI 52 Query: 146 EVIFTGGDPLILSHKRLQKVLK 167 ++ FTGG+PL L+ ++K++ Sbjct: 53 KIQFTGGEPL-LNFNLIEKIVD 73 >gi|167586605|ref|ZP_02378993.1| molybdenum cofactor biosynthesis protein A [Burkholderia ubonensis Bu] Length = 370 Score = 42.8 bits (100), Expect = 0.073, Method: Composition-based stats. Identities = 20/101 (19%), Positives = 42/101 (41%), Gaps = 13/101 (12%) Query: 81 NNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDT 131 H+P G++H R L + + C C +C F ++ +L+ ++ Sbjct: 20 AAHTP-DGLLHDTLARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTLEEI 78 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 E + ++ TGG+PL+ K L+ +++ L + Sbjct: 79 ERIARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116 >gi|326791250|ref|YP_004309071.1| ribosomal protein S12 methylthiotransferase rimO [Clostridium lentocellum DSM 5427] gi|326542014|gb|ADZ83873.1| Ribosomal protein S12 methylthiotransferase rimO [Clostridium lentocellum DSM 5427] Length = 448 Score = 42.8 bits (100), Expect = 0.074, Method: Composition-based stats. Identities = 32/159 (20%), Positives = 59/159 (37%), Gaps = 24/159 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--- 153 +K+ C +C +C ++ G + + +A + + + E+I D Sbjct: 150 AYVKISEGCDKHCTYCIIPKLRGKYRSRQMDK--IKAEVEKLAAD-GVSEIILVAQDTTE 206 Query: 154 -PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211 L + L K+L L I+ ++ +R V P+ I ELI+ +K K Y+ I Sbjct: 207 YGRDLENASLAKLLHELGEIEGIEWIR----VLYCYPESITDELIEEIKTNPKVCKYLDI 262 Query: 212 HANHP-----YEFS-----EEAIAAISRLANA--GIILL 238 H + E+ + +L GI L Sbjct: 263 PIQHASTAILKRMARKSSLEQLKERLGKLRQEIPGIALR 301 >gi|315645963|ref|ZP_07899084.1| RNA modification enzyme, MiaB family protein [Paenibacillus vortex V453] gi|315278724|gb|EFU42038.1| RNA modification enzyme, MiaB family protein [Paenibacillus vortex V453] Length = 447 Score = 42.8 bits (100), Expect = 0.075, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 16/126 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + S + A + E++ TG Sbjct: 142 RTRAFLKIQDGCNNFCTFCIIPWSRGLSRSRDPKSI-IQQAHQLVGA--GYKEIVLTGIH 198 Query: 152 ----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 GD L RL +L L + ++ +R S ++ +I+ +++ L + K + Sbjct: 199 TGGYGD--DLEEYRLSDLLWDLDRVDGLERIRISS----IEASQIDEKMLDVLNRSTK-M 251 Query: 208 YIAIHA 213 +H Sbjct: 252 CRHLHI 257 >gi|321314705|ref|YP_004206992.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5] gi|291483457|dbj|BAI84532.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. natto BEST195] gi|320020979|gb|ADV95965.1| coproporphyrinogen III oxidase [Bacillus subtilis BSn5] Length = 501 Score = 42.8 bits (100), Expect = 0.075, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 15/161 (9%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131 I D + + + + + + CP C +C + + S Sbjct: 153 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 212 Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189 + +++E ++ + F GG P ++ + + + + + R V+ +R + V P Sbjct: 213 QKIGEWLKEHDVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREIT-VEAGRP 271 Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 I E + L + + I P + E + AI R Sbjct: 272 DTITEEKLAVLNKYDIDRISIN-----PQSYENETLKAIGR 307 >gi|154505306|ref|ZP_02042044.1| hypothetical protein RUMGNA_02820 [Ruminococcus gnavus ATCC 29149] gi|153794349|gb|EDN76769.1| hypothetical protein RUMGNA_02820 [Ruminococcus gnavus ATCC 29149] Length = 440 Score = 42.8 bits (100), Expect = 0.075, Method: Composition-based stats. Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 21/151 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 LK+ C +C +C ++ G+ + + + + Y+ E+ ++ L Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFR--SVPMEQLLSEAEYLAEQGVKELILVAQETTLY 203 Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211 K L K+L+ L I ++ +R P+ I ELIQ +KE K Y+ + Sbjct: 204 GKDLYGEKSLHKLLRELCKISGIRWIRI----LYCYPEEIYDELIQTIKEEPKICHYLDL 259 Query: 212 HANHPY-EF---------SEEAIAAISRLAN 232 H E +E I IS+L Sbjct: 260 PIQHANDEILKRMGRRTTKQELIDIISKLRR 290 >gi|225175074|ref|ZP_03729070.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT 1] gi|225169250|gb|EEG78048.1| RNA modification enzyme, MiaB family [Dethiobacter alkaliphilus AHT 1] Length = 431 Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 19/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C +C + ++ + AA A + E++ + Sbjct: 140 RTRAFLKVQEGCRQFCSYCI---VPYARGPLHSRPPEDAAAEAERLAEQGFSEMVLSGVH 196 Query: 151 ----GGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L + L +++ L I+ ++ +R S ++P I P+LI+ L + K Sbjct: 197 LGSYGED---LPGELALSDLIRELVTIEKIRRIRISS----IEPTEITPDLIEVLLDYPK 249 Query: 206 PVYIAIHA 213 V +H Sbjct: 250 -VCRHLHI 256 >gi|225389119|ref|ZP_03758843.1| hypothetical protein CLOSTASPAR_02865 [Clostridium asparagiforme DSM 15981] gi|225044818|gb|EEG55064.1| hypothetical protein CLOSTASPAR_02865 [Clostridium asparagiforme DSM 15981] Length = 378 Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 58/130 (44%), Gaps = 15/130 (11%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + +YP + + ++ C +C +C + G ++ ++ + + + E++ Sbjct: 191 VERKYPFKSGVNIIFGCNNFCSYCIVPYVRGRERSRRP--EEILKEVKRLAAD-GVVEIM 247 Query: 149 FTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 G + + K L++ +L+ + I ++ +RF + P+ ++ ELI+ + + Sbjct: 248 LLGQN-VNSYGKNLEEPMTFAQLLREVEKIDGIERIRFMTSH----PKDLSDELIEVMSQ 302 Query: 203 AGKPVYIAIH 212 + K + +H Sbjct: 303 S-KKICRHLH 311 >gi|196015044|ref|XP_002117380.1| hypothetical protein TRIADDRAFT_61388 [Trichoplax adhaerens] gi|190580133|gb|EDV20219.1| hypothetical protein TRIADDRAFT_61388 [Trichoplax adhaerens] Length = 590 Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 16/114 (14%) Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGT 124 E+ E D G R D + + L C + C++C E VG + + Sbjct: 40 EVKPFSEFLTDSFG------------RKHDYLRISLTERCNLRCQYCMPSEGVGLTPQER 87 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 +L++ + L+ + + ++ TGG+PL+ L +++ + I + ++ Sbjct: 88 LLTADEIIK-LSQLFASEGVTKIRLTGGEPLVRRD--LIDIVREINLIPGIDVI 138 >gi|296242016|ref|YP_003649503.1| radical SAM domain-containing protein [Thermosphaera aggregans DSM 11486] gi|296094600|gb|ADG90551.1| Radical SAM domain protein [Thermosphaera aggregans DSM 11486] Length = 305 Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 64/186 (34%), Gaps = 33/186 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L C +C +C+ +G + T S+ + + LA +++ S I + T DP Sbjct: 32 LHPYTGCSHFCLYCYATSYIGRKPSTPKSNFLESLKTDLAKVEKGSIIE--LSTSSDPY- 88 Query: 157 LSHKRLQKVL-----KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 +++ + L H ++ I RI + L ++ + I Sbjct: 89 ---PPIEEWVGLTRNTLLLLRDH------GMKILITTKSRIVERDVDILSKS--HAAVMI 137 Query: 212 HANH-----PYEFSEEAI------AAISRLANAGIILLSQS-VLLKGINDDPEILANLMR 259 A I L + G+ + + ++ G+NDDP L L+ Sbjct: 138 TITTLDREVSRRLEPGAASPEDRLRTIQYLKDHGVPVGVRIDPVIPGVNDDPLELKELVD 197 Query: 260 TFVELR 265 V+ Sbjct: 198 AVVDAG 203 >gi|225017551|ref|ZP_03706743.1| hypothetical protein CLOSTMETH_01478 [Clostridium methylpentosum DSM 5476] gi|224949701|gb|EEG30910.1| hypothetical protein CLOSTMETH_01478 [Clostridium methylpentosum DSM 5476] Length = 441 Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 60/168 (35%), Gaps = 27/168 (16%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 LK+ C C +C + G + L +D ++ S + E+I D Sbjct: 147 AYLKIAEGCDNNCTYCAIPAIRGPYRSRKL--EDIVEEAEWLAS-SGVKELIVVAQDTTR 203 Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210 +L ++L+ L I +R V P+ + EL+ L E K YI Sbjct: 204 YGSDLYGELKLPELLRRLCQIDGFVWIR----VLYCYPEMVTDELLDVLAEEPKMAKYID 259 Query: 211 I---HAN-------HPYEFSEEAIAAISRLANA--GIILLSQSVLLKG 246 I H N H EE ++ + R+ I L + L+ G Sbjct: 260 IPIQHINSAVLRRMHRRSTREEILSVVQRVRERVPNITLR--TTLIAG 305 >gi|91773394|ref|YP_566086.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM 6242] gi|91712409|gb|ABE52336.1| Radical SAM family protein [Methanococcoides burtonii DSM 6242] Length = 403 Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 51/146 (34%), Gaps = 26/146 (17%) Query: 92 RY-PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVI 148 +Y P+ + ++ C C C M G + + K + AL + Sbjct: 100 KYVPETVSFEITRNCNCNCEHCI---MSGGEGDLDTATIKKAIDEALD-----MGAVVIT 151 Query: 149 FTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 FT GDPL+ L + + + I V I + + PE+ Q LK+ G Sbjct: 152 FTEGDPLLREDIFELIEYVDKDKAI--VNIYTPGTEM--------TPEVAQKLKDTGLHN 201 Query: 208 YIAIHANHPYEFSEEAIAAISRLANA 233 + + E ++ +L A Sbjct: 202 LLVSIYSTV----PEEHDSVRKLKGA 223 >gi|15894987|ref|NP_348336.1| Fe-S oxidoreductase [Clostridium acetobutylicum ATCC 824] gi|15024675|gb|AAK79676.1|AE007680_9 Fe-S oxidoreductase, related to NifB/MoaA family with PDZ N-terminal domain [Clostridium acetobutylicum ATCC 824] gi|325509124|gb|ADZ20760.1| Fe-S oxidoreductase [Clostridium acetobutylicum EA 2018] Length = 437 Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 63/167 (37%), Gaps = 37/167 (22%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 +L C C FCF ++ + T+ D ++ L+++Q V T + Sbjct: 80 ILDSAKSCRNKCIFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FVTLT-----NM 129 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 S + +++K I + I V +P+ L++ Sbjct: 130 SDDDIDRIIK--YRISPINI-----SVQTTNPE---------LRKKMLN----------N 163 Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 +F+ + + +L+NAGI + Q VL GIN E + + +L Sbjct: 164 KFAGNLMERMKKLSNAGITMNCQVVLCPGIN-SGEEFSKTVNDLYKL 209 >gi|16079597|ref|NP_390421.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis subsp. subtilis str. 168] gi|221310468|ref|ZP_03592315.1| hypothetical protein Bsubs1_13906 [Bacillus subtilis subsp. subtilis str. 168] gi|221314791|ref|ZP_03596596.1| hypothetical protein BsubsN3_13822 [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221319714|ref|ZP_03601008.1| hypothetical protein BsubsJ_13743 [Bacillus subtilis subsp. subtilis str. JH642] gi|221323991|ref|ZP_03605285.1| hypothetical protein BsubsS_13877 [Bacillus subtilis subsp. subtilis str. SMY] gi|1730990|sp|P54462|YQEV_BACSU RecName: Full=Putative methylthiotransferase yqeV gi|1303812|dbj|BAA12468.1| YqeV [Bacillus subtilis] gi|1890061|dbj|BAA12080.1| YqeV [Bacillus subtilis] gi|2634989|emb|CAB14485.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis subsp. subtilis str. 168] gi|291484990|dbj|BAI86065.1| hypothetical protein BSNT_03787 [Bacillus subtilis subsp. natto BEST195] Length = 451 Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G +L S+D E + Q+ + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196 Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + K+L L ++ V+ +R S ++ +I E+I+ L + Sbjct: 197 IHTGGYGED---MKDYNFAKLLSELDTRVEGVKRIRISS----IEASQITDEVIEVLDRS 249 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 250 DK-IVNHLHI 258 >gi|119718600|ref|YP_925565.1| radical SAM domain-containing protein [Nocardioides sp. JS614] gi|119539261|gb|ABL83878.1| Radical SAM domain protein [Nocardioides sp. JS614] Length = 381 Score = 42.8 bits (100), Expect = 0.076, Method: Composition-based stats. Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 27/135 (20%) Query: 81 NNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 + ++ + H DR L+ + C + CR C R + L+++ +A L Sbjct: 7 ADQRAVRQLHHDPGDRPLITIWEVTRACALVCRHC-RADAQTRADPRQLTTEQGKALLDD 65 Query: 138 IQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-------PIVDP 189 I + + V+ TGGDP L ++ +R+ + + P V P Sbjct: 66 IAGFGKPYPIVVLTGGDPFERPD--LAEL------------VRYGTALGLHVALSPSVTP 111 Query: 190 QRINPELIQCLKEAG 204 R+ P+++ L+ AG Sbjct: 112 -RLTPDVLAELRAAG 125 >gi|296333299|ref|ZP_06875752.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305675196|ref|YP_003866868.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis subsp. spizizenii str. W23] gi|296149497|gb|EFG90393.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305413440|gb|ADM38559.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis subsp. spizizenii str. W23] Length = 451 Score = 42.8 bits (100), Expect = 0.077, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G +L S+D E + Q+ + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196 Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + K+L L ++ V+ +R S ++ +I E+I+ L + Sbjct: 197 IHTGGYGED---MKDYNFAKLLSELDTRVEGVKRIRISS----IEASQITDEVIEVLDRS 249 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 250 DK-IVNHLHI 258 >gi|187477325|ref|YP_785349.1| molybdenum cofactor biosynthesis protein A [Bordetella avium 197N] gi|115421911|emb|CAJ48431.1| molybdenum cofactor biosynthesis protein A [Bordetella avium 197N] Length = 360 Score = 42.8 bits (100), Expect = 0.077, Method: Composition-based stats. Identities = 46/254 (18%), Positives = 85/254 (33%), Gaps = 60/254 (23%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDT 131 P+ D PL+ + + + C C +C R++ + +LS ++ Sbjct: 24 PLRDQRGRPLRDLR--------ISVTDRCNFRCTYCMPRDVFDASYRFMPHSALLSFEEI 75 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 A ++ TGG+PL+ + K++ L + R P P Sbjct: 76 TRAARVFTRLGT-EKIRLTGGEPLLRKD--VDKLIAMLADL----------RTPQGLPLD 122 Query: 192 IN----PELIQC----LKEAGK-PVYIAIHANHPYEF--------SE-EAIAAISRLANA 233 + L+ LK AG V +++ A P F + + + I A A Sbjct: 123 LTLTTNASLLARKASALKAAGLGRVTVSLDALDPGRFKQLADADYTPSDVLRGIDAAAAA 182 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 G+ + V+ +G+NDD + L R F H + + G + Sbjct: 183 GLPVKVNMVVRRGVNDD--QILPLARHFRHSG------HVLRFI---EYMDVGNSNGWNL 231 Query: 294 VA-----SLKEKIS 302 L ++S Sbjct: 232 AEVLPSAELIARLS 245 >gi|16081159|ref|NP_388865.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis str. 168] gi|221308821|ref|ZP_03590668.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis str. 168] gi|221313144|ref|ZP_03594949.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318068|ref|ZP_03599362.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis str. JH642] gi|221322343|ref|ZP_03603637.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis str. SMY] gi|59799598|sp|Q796V8|HEMZ_BACSU RecName: Full=Oxygen-independent coproporphyrinogen-III oxidase 2; Short=Coprogen oxidase; Short=Coproporphyrinogenase gi|32468726|emb|CAB12823.2| coproporphyrinogen III oxidase [Bacillus subtilis subsp. subtilis str. 168] Length = 501 Score = 42.8 bits (100), Expect = 0.077, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 15/161 (9%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131 I D + + + + + + CP C +C + + S Sbjct: 153 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 212 Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189 + +++E ++ + F GG P ++ + + + + + R V+ +R + V P Sbjct: 213 QKIGEWLKEHDVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREIT-VEAGRP 271 Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 I E + L + + I P + E + AI R Sbjct: 272 DTITEEKLAVLNKYDIDRISIN-----PQSYENETLKAIGR 307 >gi|228987980|ref|ZP_04148086.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228771784|gb|EEM20244.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 339 Score = 42.8 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177 >gi|222098198|ref|YP_002532255.1| molybdenum cofactor biosynthesis protein a [Bacillus cereus Q1] gi|221242256|gb|ACM14966.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus Q1] Length = 334 Score = 42.8 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 15 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 73 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 74 PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 125 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 126 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 172 >gi|206977358|ref|ZP_03238255.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus H3081.97] gi|217962214|ref|YP_002340784.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187] gi|206744509|gb|EDZ55919.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus H3081.97] gi|217067222|gb|ACJ81472.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH187] Length = 337 Score = 42.8 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175 >gi|23099419|ref|NP_692885.1| hypothetical protein OB1964 [Oceanobacillus iheyensis HTE831] gi|22777648|dbj|BAC13920.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831] Length = 450 Score = 42.8 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 18/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + E A ++ E++ TG Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWSRGLLR-SRDPKNVIEQATKLVKA--GYKELVLTGIH 198 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D + +L+ L ++ ++ +R S ++ +I E+I + ++ K Sbjct: 199 TAGYGED---MKDYNFAMLLRELEEVEGLERIRISS----IEASQITDEVIDVIDQSNK- 250 Query: 207 VYIAIHA 213 + +H Sbjct: 251 IVRHLHV 257 >gi|47565151|ref|ZP_00236194.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus G9241] gi|47557937|gb|EAL16262.1| molybdopterin cofactor biosynthesis protein A [Bacillus cereus G9241] Length = 337 Score = 42.8 bits (100), Expect = 0.078, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 77 PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 128 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 129 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 175 >gi|260173948|ref|ZP_05760360.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. D2] gi|315922216|ref|ZP_07918456.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. D2] gi|313696091|gb|EFS32926.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. D2] Length = 152 Score = 42.8 bits (100), Expect = 0.079, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C +C C E G L+ + ++ + I+ + V F+GGDP + L Sbjct: 25 GCSHHCLGCHNPESWNPGAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEEFL 83 >gi|257460123|ref|ZP_05625227.1| radical SAM domain protein [Campylobacter gracilis RM3268] gi|257442564|gb|EEV17703.1| radical SAM domain protein [Campylobacter gracilis RM3268] Length = 275 Score = 42.8 bits (100), Expect = 0.079, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 64/184 (34%), Gaps = 36/184 (19%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQE----KSQIWEVI 148 R+ L + C + C FC R ++ ++ + + A Y++ + I + Sbjct: 24 GRVHLPVAPNCNIQCNFCNRIYDCANENRPGVTGRVQSPDEAALYVENLFKFRQDISVIG 83 Query: 149 FTG-GDPLILSHKRLQKV---------------LKTLRYIKHV-QILRFHSRVPIVDPQR 191 G GDP+ + K L L +HV I+R V Sbjct: 84 IAGPGDPMCDADKTLATFEKCKARFPHALLCLSTNGLSLPEHVDDIVRIGVSHVTVTVNA 143 Query: 192 INPELIQCLKEAGKPVYIAIHAN---HPYE----FSEEAIAAISRLANAGIILLSQSVLL 244 + P++ GK H N H E E I +L A +I+ +V++ Sbjct: 144 VTPDV------GGKIYAWVRHKNKIYHGEEGARILGERQEEGIRKLKEARMIVKINTVVI 197 Query: 245 KGIN 248 G+N Sbjct: 198 PGVN 201 >gi|138894331|ref|YP_001124784.1| molybdenum cofactor biosynthesis protein A [Geobacillus thermodenitrificans NG80-2] gi|196248059|ref|ZP_03146761.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. G11MC16] gi|134265844|gb|ABO66039.1| Molybdenum cofactor biosynthesis protein A [Geobacillus thermodenitrificans NG80-2] gi|196212843|gb|EDY07600.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. G11MC16] Length = 341 Score = 42.8 bits (100), Expect = 0.079, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 63/174 (36%), Gaps = 38/174 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 L ++ C C +C E+ G +G +L+ ++ A L+ + + ++ TGG+ Sbjct: 22 LSVIDQCNFRCIYCMPAEVFGPNFRFLAEGELLTVEEM-ALLSECFVELGVEKIRLTGGE 80 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRV--PIVDPQR---------------INPEL 196 PL+ L ++ L I ++ + + + QR ++ ++ Sbjct: 81 PLLRRD--LDALVARLSAIPGLRDIGLTTNGVHLVKWAQRLKEAGLKRVNVSLDALDDDI 138 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + G V + I AG+ + V+ KG ND Sbjct: 139 FRKMNGIGVGVA-------------PVLKGIEAARAAGLGVKVNMVVKKGWNDS 179 >gi|187778464|ref|ZP_02994937.1| hypothetical protein CLOSPO_02058 [Clostridium sporogenes ATCC 15579] gi|187772089|gb|EDU35891.1| hypothetical protein CLOSPO_02058 [Clostridium sporogenes ATCC 15579] Length = 432 Score = 42.8 bits (100), Expect = 0.079, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 21/133 (15%) Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIW 145 + Y D R LK+ C +C +C ++ +G V S K E + ++ K Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKK-PEKVMEEVRKLSKHGFK 189 Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 E+I +G D L +L+ + ++ ++ +R S +DP E I + Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEDIDKVEGIERIRIGS----IDPTFFTEEEIIRI 245 Query: 201 KEAGKPVYIAIHA 213 + K H Sbjct: 246 SKLKK---FCPHF 255 >gi|325829809|ref|ZP_08163267.1| putative heme d1 biosynthesis radical SAM protein NirJ2 [Eggerthella sp. HGA1] gi|325487976|gb|EGC90413.1| putative heme d1 biosynthesis radical SAM protein NirJ2 [Eggerthella sp. HGA1] Length = 334 Score = 42.8 bits (100), Expect = 0.080, Method: Composition-based stats. Identities = 39/215 (18%), Positives = 75/215 (34%), Gaps = 47/215 (21%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C + C C++ LS ++ + + I + +IF+GG+PL+ Sbjct: 3 VSWMTTNKCNLKCVHCYQDAE--EATDKELSCEEGKKMIDEIAR-AGFKVMIFSGGEPLM 59 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG--------KP 206 + +++ + LR P+ I PE+ LKEAG Sbjct: 60 RPD--IYELVAHAAS----RGLR-----PVFGSNGTLITPEVAVRLKEAGACAMGISVDS 108 Query: 207 VYIAIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRT 260 + H H Y+ + I A AG+ Q L + D + + + + Sbjct: 109 LDAVKHDRFRGLEHAYDLTMAGIEAC---KQAGLPF--Q--LHTTVVDWNRDEVCAITDF 161 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 VE+ +Y+ F + + G+ I Sbjct: 162 AVEIGAMAHYVF----------FLIPVGRGKFIQE 186 >gi|294793531|ref|ZP_06758668.1| radical SAM domain protein [Veillonella sp. 3_1_44] gi|294455101|gb|EFG23473.1| radical SAM domain protein [Veillonella sp. 3_1_44] Length = 394 Score = 42.8 bits (100), Expect = 0.080, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 30/167 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYI--QEKSQIWEVIFTGGDPL 155 CP C FC + + G + L+ + + + Y+ + + WEV F GG Sbjct: 5 FIPHVGCPYVCTFCNQSRITGQSGISHLTPEYIQQTIKDYVGTKRNEKFWEVAFYGG-SF 63 Query: 156 ILSHKRLQK-VLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210 K LQ +L + + +R +R P + E I L+ G K V + Sbjct: 64 TAIIKDLQHKLLMPAYEMLQQGLIDGIRCSTR-----PDAVGDEAITLLQSYGVKTVELG 118 Query: 211 IHAN-----------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 + + H + E + A++RL + + + Q LL G Sbjct: 119 VQSMNDGILVDAKRGHTAQ---EVVEAVTRLKHRDMTVGVQ--LLPG 160 >gi|118602407|ref|YP_903622.1| radical SAM protein [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] gi|205829871|sp|A1AW44|RLMN_RUTMC RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|118567346|gb|ABL02151.1| 23S rRNA m(2)A-2503 methyltransferase [Candidatus Ruthia magnifica str. Cm (Calyptogena magnifica)] Length = 356 Score = 42.8 bits (100), Expect = 0.080, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 66/186 (35%), Gaps = 37/186 (19%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYI-QEKSQIWEVIFTG-GDPLILS- 158 C + C FC M G K + A Y+ + +I V+F G G+PL+ Sbjct: 111 GCGLACTFCS-TGMQGFNKNLTTAEIIAQVLIASRYLNSKTKRISNVVFMGMGEPLLNEH 169 Query: 159 ------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 L + L + + + + P +++ + + +++H Sbjct: 170 AVYNACDLLLDDLAFGLSR----RKVTISTSGVV-------PAMLRMSERTPVSLAVSLH 218 Query: 213 AN--HPY-EFSE--------EAIAAISRLANAGII---LLSQSVLLKGINDDPEILANLM 258 A+ H E E + A AG +L + V+LKG+ND E L+ Sbjct: 219 ASDDHLRNELVPINQKYSLEELLKACKVYLQAGTQKRHILFEYVMLKGVNDSIEHANKLV 278 Query: 259 RTFVEL 264 + + Sbjct: 279 KLLKGI 284 >gi|54024605|ref|YP_118847.1| hypothetical protein nfa26360 [Nocardia farcinica IFM 10152] gi|54016113|dbj|BAD57483.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 526 Score = 42.8 bits (100), Expect = 0.080, Method: Composition-based stats. Identities = 41/204 (20%), Positives = 77/204 (37%), Gaps = 27/204 (13%) Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 P K L P DP+ L + ++ +L +L C + C CF + Sbjct: 87 PTKAHLPDTPG-NFDPVPAAYLRGLPEMQTQHTCILLADILAGCNLRCPTCF--ADSTPE 143 Query: 122 KGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 V++ D A + +E ++ ++ +GG+P + L +L L + + Sbjct: 144 LAGVVAVADVLANVDQRLAREHGRLDVLMLSGGEPTLHPD--LPTLLAELTARP-ITRIL 200 Query: 180 FHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHAN--------HPY--EFSEEAIAAI 227 ++ R+ + L+ L E + V + + + H + A+ Sbjct: 201 INTNGV-----RLARDESLVALLAEHRERVEVYLQYDGVSAAASRHHRGGDLRALKAEAL 255 Query: 228 SRLANAGI-ILLSQSVLLKGINDD 250 RL+ GI L +V L G+NDD Sbjct: 256 RRLSGHGIFTTLVMTVAL-GVNDD 278 >gi|6685644|sp|O27593|MOAA_METTH RecName: Full=Probable molybdenum cofactor biosynthesis protein A Length = 305 Score = 42.8 bits (100), Expect = 0.080, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 30/164 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C V C +C R M S+ LS+ D E + + ++ +GG+PLI Sbjct: 16 LSITGRCNVNCIYCHRDGMTSSRGE--LSAADIEKLCR-VASDLGVGKIRLSGGEPLIRD 72 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 + ++++ + I + + + + L EAG + + + Sbjct: 73 D--IVEIVERINNIG-FRDISITTNG------TLLEGYSAALSEAGLD-RVNVSFDT--- 119 Query: 219 FSEEAIAAISR-----LANAGI---------ILLSQSVLLKGIN 248 + E I+R +GI + V+L+G+N Sbjct: 120 LNPETYRFITRKDYLERVKSGITSAVDVGLDPVKINMVILRGVN 163 >gi|295106858|emb|CBL04401.1| Predicted Fe-S oxidoreductases [Gordonibacter pamelaeae 7-10-1-b] Length = 335 Score = 42.8 bits (100), Expect = 0.081, Method: Composition-based stats. Identities = 40/215 (18%), Positives = 74/215 (34%), Gaps = 47/215 (21%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C + C C++ LS+ + + I + +IF+GG+PL+ Sbjct: 3 VSWMTTNKCNLKCVHCYQDAE--EASALELSTDEGRKMIDEIAR-AGFKVMIFSGGEPLM 59 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG--------KP 206 + +++ + LR P+ I PE LKEAG Sbjct: 60 RPD--IYELVAHAAS----RGLR-----PVFGSNGTLITPEAAARLKEAGACAMGISVDS 108 Query: 207 VYIAIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRT 260 + A H H Y+ + I A AG+ Q L + D + + + + Sbjct: 109 LDAAKHDKFRGLEHAYDLTMAGIEAC---KQAGLPF--Q--LHTTVVDWNRDEVCAITDF 161 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 VE+ +Y+ F + + G+ I Sbjct: 162 AVEIGAMAHYVF----------FLIPVGRGKFIQE 186 >gi|262196535|ref|YP_003267744.1| molybdenum cofactor biosynthesis protein A [Haliangium ochraceum DSM 14365] gi|262079882|gb|ACY15851.1| molybdenum cofactor biosynthesis protein A [Haliangium ochraceum DSM 14365] Length = 346 Score = 42.8 bits (100), Expect = 0.081, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 77/212 (36%), Gaps = 21/212 (9%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C C +C MV + +LS ++ E + + + TGG+P + Sbjct: 25 VSLTDRCNFRCTYCMPATGMVFRARKELLSFEELERLIGVFAS-VGVRRIRLTGGEP-TV 82 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216 + + ++ + + + V + + PEL Q L EAG V I++ P Sbjct: 83 RAEVVS-LVGRIARVPGID------EVVMTSNGHLFPELAQPLAEAGLAGVNISLDTLDP 135 Query: 217 YEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 F A I AG+ + +V LKG ND + L I P Sbjct: 136 ERFRALTRRGDLARVLAGIDAARAAGLEVKINAVALKGEND--AEVPALCAYAWGRGITP 193 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 ++ H ++ G + +I A++ Sbjct: 194 RFIEHMPMSEGQLYSETRQLTAAEIRAAVSAH 225 >gi|154500609|ref|ZP_02038647.1| hypothetical protein BACCAP_04282 [Bacteroides capillosus ATCC 29799] gi|150270498|gb|EDM97807.1| hypothetical protein BACCAP_04282 [Bacteroides capillosus ATCC 29799] Length = 253 Score = 42.8 bits (100), Expect = 0.081, Method: Composition-based stats. Identities = 36/193 (18%), Positives = 69/193 (35%), Gaps = 25/193 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + CP+ C +C + G++ GT ++ + AA + + + TGG+ Sbjct: 21 PGIRFVVFFQGCPMRCLYCHNPDTWGTEGGTEMTVDELLAAYQRNKGFYRQGGITATGGE 80 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFH----SRVPIVDPQRINPELIQCLKEAGKPVYI 209 PL L L ++ + H + + P E + Sbjct: 81 PL-LQLPFLTELFTAAKEQG------IHTCLDTSGIVYRPDHRQGEFDALFAVTDLVLLD 133 Query: 210 AIHAN---HPYEFSEE----AIAAISRLANAGIILLSQSVLLKGINDDPEILANL----- 257 HA+ H + + + +A L A + ++ + V++ G+ D P+ L L Sbjct: 134 IKHADPQGH-RQLTGQDQSPVLAFARALEQAKVPIIVRHVVVPGLTDSPQELTALGRLIA 192 Query: 258 -MRTFVELRIKPY 269 R L + PY Sbjct: 193 PFRNLKGLEVLPY 205 >gi|299148082|ref|ZP_07041145.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 3_1_23] gi|298514265|gb|EFI38151.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 3_1_23] Length = 152 Score = 42.8 bits (100), Expect = 0.081, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C +C C E G L+ + ++ + I+ + V F+GGDP + L Sbjct: 25 GCSHHCPGCHNPESWNPGAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEEFL 83 >gi|227504771|ref|ZP_03934820.1| radical SAM domain protein [Corynebacterium striatum ATCC 6940] gi|227198621|gb|EEI78669.1| radical SAM domain protein [Corynebacterium striatum ATCC 6940] Length = 394 Score = 42.8 bits (100), Expect = 0.081, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 24/120 (20%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTG 151 P + ++ C + C+ C R + L+++ +A L I + V+ TG Sbjct: 17 KPFIAIWEVTRACQLVCQHC-RADAQHEPAPGQLTTEQGKALLDSIASYDKPRPIVVLTG 75 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-------PIVDPQRINPELIQCLKEAG 204 GDP L+++ + + + + P V P R+ E ++ L+ AG Sbjct: 76 GDPFERGD--LEELTE------------YGTSLGLNVSLSPSVTP-RLTRERLEGLRAAG 120 >gi|313159153|gb|EFR58528.1| menaquinone biosynthesis protein, SCO4494 family [Alistipes sp. HGB5] Length = 360 Score = 42.8 bits (100), Expect = 0.082, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 4/77 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 ++ + C CRFC R GS + + ++ E +A ++ I EV GG + Sbjct: 58 IEPTNRCVFNCRFCSYRRPAGSPEAWDYTMEEIEQ-IARGRQGKGITEVHIVGG---VHP 113 Query: 159 HKRLQKVLKTLRYIKHV 175 L+ + +R +K + Sbjct: 114 DHGLEYYIDMIRRVKAI 130 >gi|303232268|ref|ZP_07318967.1| MiaB-like protein [Atopobium vaginae PB189-T1-4] gi|302481678|gb|EFL44739.1| MiaB-like protein [Atopobium vaginae PB189-T1-4] Length = 449 Score = 42.8 bits (100), Expect = 0.082, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 17/128 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R +K+ C C FC + G S D + ++ ++ EV+ TG Sbjct: 162 RTRPGIKVQDGCNNRCSFCIVWKARGP-----ACSADVDEIISQVRATQAHGAHEVVLTG 216 Query: 152 ---GDP---LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 GD S RL +L + ++ +R S ++P I EL+ + + Sbjct: 217 INLGDYRYEYKGSRLRLPGLLSEIMKQTSIERIRLSS----IEPPDITDELLDVIAGSEG 272 Query: 206 PVYIAIHA 213 + +H Sbjct: 273 RIAQFLHI 280 >gi|282857182|ref|ZP_06266426.1| 23S rRNA m2A2503 methyltransferase [Pyramidobacter piscolens W5455] gi|282584968|gb|EFB90292.1| 23S rRNA m2A2503 methyltransferase [Pyramidobacter piscolens W5455] Length = 365 Score = 42.8 bits (100), Expect = 0.082, Method: Composition-based stats. Identities = 43/224 (19%), Positives = 80/224 (35%), Gaps = 48/224 (21%) Query: 104 VCPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLI 156 CP+ C FC F+R + + + ++ +++ I V+F G G+PL+ Sbjct: 134 GCPLRCEFCATGQQGFKRNLSAGEIVSHFAAMESDVGHD-------INNVVFMGMGEPLL 186 Query: 157 LSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 ++ L+ V+ + + PE I+ L + G +Y+ + Sbjct: 187 NYENVVKAVRMFLEPKMRGLSVRHVTISTSGI--------PEGIRRLADEGLDIYLCLSL 238 Query: 214 NHPY-EFS------------EEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILANL-- 257 + P E +A+ G+ L + V+LK +ND P+ L Sbjct: 239 HAPNNELRSRIMPVNERFPLGAVFSALEYWQKKTGVRLTIEYVMLKNVNDTPDCAYELAT 298 Query: 258 --MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKE 299 V + + PY + AGT R + + LK Sbjct: 299 LFSNLQVYVNLIPY-----NPVAGTQFARPSASRIAPFMKILKG 337 >gi|311067283|ref|YP_003972206.1| putative Fe-S oxidoreductase, radical SAM superfamily protein [Bacillus atrophaeus 1942] gi|310867800|gb|ADP31275.1| putative Fe-S oxidoreductase, radical SAM superfamily protein [Bacillus atrophaeus 1942] Length = 372 Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L + L ++E + + TGG+P + Sbjct: 33 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALP---IDLLLQRLEEIPLLRSISITGGEP-M 88 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K +++ + L H + +R +IN L ++ P +H + Sbjct: 89 LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIERYEWIIPYLDVLHIS 138 Query: 215 H 215 H Sbjct: 139 H 139 >gi|303239253|ref|ZP_07325782.1| protein of unknown function DUF512 [Acetivibrio cellulolyticus CD2] gi|302593298|gb|EFL63017.1| protein of unknown function DUF512 [Acetivibrio cellulolyticus CD2] Length = 434 Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 65/164 (39%), Gaps = 40/164 (24%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 ++ ++ C C FCF ++ + ++ D ++ L+++Q V T Sbjct: 77 EKEIMDEARSCRNNCLFCFIDQLPKGMRKSLYFKDD-DSRLSFLQGN----FVTLT---- 127 Query: 155 LILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIH 212 ++ + + ++++ + I + H+ +P RI + LK Sbjct: 128 -NMTDEDIDRIIRYRICPI----NISVHT----TNPDLRI-----KMLK----------- 162 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 F+ + + +LA AGI++ Q VL G N+ E++ Sbjct: 163 ----NRFAGDVYTRLQKLAAAGIMMNCQIVLCPGYNNGEELIKT 202 >gi|239623740|ref|ZP_04666771.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521771|gb|EEQ61637.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 492 Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 65/160 (40%), Gaps = 28/160 (17%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 K ++ I E D I + P++ +YP + + ++ C +C +C + G ++ Sbjct: 170 HKHKMVIDVWEDTDQIVE--DLPVE---RKYPFKSGVNIMFGCNNFCSYCIVPYVRGRER 224 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----------PLILSHKRLQKVLKTLRYI 172 ++ + + + EV+ G + P+ +L+ + + Sbjct: 225 SR--KPEEIIKEIRRLASD-GVVEVMLLGQNVNSYGKNLETPMTF-----AGLLREVEKV 276 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 ++ +RF + P+ ++ ELI+ + +GK + +H Sbjct: 277 DGIRRIRFMTSH----PKDLSDELIEVMAGSGK-ICRHLH 311 >gi|149199462|ref|ZP_01876497.1| putative Fe-S oxidoreductase [Lentisphaera araneosa HTCC2155] gi|149137397|gb|EDM25815.1| putative Fe-S oxidoreductase [Lentisphaera araneosa HTCC2155] Length = 437 Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 42/124 (33%), Gaps = 13/124 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R LK+ C C FC + S+D E L + E++ TG Sbjct: 148 KTRANLKIQDGCDFMCTFC-----IIPMARGRSRSRDMENLLEEARTLIGQGFREIVITG 202 Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + + V+ L ++ ++ +R S P P++I + + + Sbjct: 203 VNVATYDSQGRTFLDVIDRLNELEGIERIRISSIEPTTIPEKI----FDYMADPNHALVP 258 Query: 210 AIHA 213 +H Sbjct: 259 YLHI 262 >gi|310659190|ref|YP_003936911.1| hypothetical protein CLOST_1886 [Clostridium sticklandii DSM 519] gi|308825968|emb|CBH22006.1| conserved protein of unknown function [Clostridium sticklandii] Length = 445 Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 58/185 (31%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 ++ + C C FCF ++ + T+ D ++ L+++Q + T + Sbjct: 87 IIDSVKTCRNKCIFCFIDQLPEGMRETLYFKDD-DSRLSFLQGN----FITMT-----NM 136 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP- 216 K + K++K RI+ PV +++H +P Sbjct: 137 GDKEIDKMIK----------------------YRIS------------PVNVSVHTTNPT 162 Query: 217 -------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVE 263 F+ + + + RL +A I + +Q VL+ +ND E+ LA+L Sbjct: 163 LRAKMLGNRFAGDVLDKMKRLKSADITMNAQIVLVPDVNDKEELDKTINDLASLYPQLNS 222 Query: 264 LRIKP 268 + I P Sbjct: 223 VAIVP 227 >gi|134277196|ref|ZP_01763911.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 305] gi|134250846|gb|EBA50925.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 305] Length = 377 Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 21/131 (16%) Query: 55 PIARQFIPQ-----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 P++R+ IP +L+ P + D PL+ + + + C C Sbjct: 7 PMSRRIIPVTPVSAAPDLSGAPLTPTGTLRDALARPLRDLR--------ISVTDRCNFRC 58 Query: 110 RFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 +C R + G +L+ ++ E + ++ TGG+PL+ K L+ Sbjct: 59 VYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPLL--RKNLEF 115 Query: 165 VLKTLRYIKHV 175 +++ L + V Sbjct: 116 LIERLANMTTV 126 >gi|126454258|ref|YP_001067111.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 1106a] gi|217420454|ref|ZP_03451959.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 576] gi|226197916|ref|ZP_03793490.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei Pakistan 9] gi|254259569|ref|ZP_04950623.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 1710a] gi|126227900|gb|ABN91440.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 1106a] gi|217395866|gb|EEC35883.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 576] gi|225930104|gb|EEH26117.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei Pakistan 9] gi|254218258|gb|EET07642.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 1710a] Length = 377 Score = 42.8 bits (100), Expect = 0.083, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 21/131 (16%) Query: 55 PIARQFIPQ-----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 P++R+ IP +L+ P + D PL+ + + + C C Sbjct: 7 PMSRRIIPVTPVSAAPDLSGAPLTPTGTLRDALARPLRDLR--------ISVTDRCNFRC 58 Query: 110 RFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 +C R + G +L+ ++ E + ++ TGG+PL+ K L+ Sbjct: 59 VYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPLL--RKNLEF 115 Query: 165 VLKTLRYIKHV 175 +++ L + V Sbjct: 116 LIERLANMTTV 126 >gi|313114194|ref|ZP_07799746.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii KLE1255] gi|310623603|gb|EFQ07006.1| radical SAM domain protein [Faecalibacterium cf. prausnitzii KLE1255] Length = 487 Score = 42.8 bits (100), Expect = 0.084, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 9/118 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C +CF + ++S + + A+ ++ E S EV F GG+PL Sbjct: 107 LHVAHTCNLNCSYCFASQGRYQGDRALMSFEVGKRAMDFLIENSGTRRNLEVDFFGGEPL 166 Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + K+L + I H + RF + I+ ++I + V +++ Sbjct: 167 MNFDMVKKLVAYCREQEKI-HNKNFRF---TMTTNGMLIDDDVIDFCNKECHNVVLSL 220 >gi|295100532|emb|CBK98077.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Faecalibacterium prausnitzii L2-6] Length = 483 Score = 42.8 bits (100), Expect = 0.084, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 9/118 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C +CF + ++S + + A+ ++ E S EV F GG+PL Sbjct: 103 LHVAHTCNLNCSYCFASQGRYQGDRALMSFEVGKRAMDFLIENSGTRRNLEVDFFGGEPL 162 Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + K+L + I H + RF + I+ ++I + V +++ Sbjct: 163 MNFDMVKKLVAYCREQEKI-HNKNFRF---TMTTNGMLIDDDVIDFCNKECHNVVLSL 216 >gi|291459649|ref|ZP_06599039.1| putative heme biosynthesis protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291417681|gb|EFE91400.1| putative heme biosynthesis protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 432 Score = 42.8 bits (100), Expect = 0.084, Method: Composition-based stats. Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 2/63 (3%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 ++ + + + C + C CF G + L ++ A + I+E + + +++ +GG+PL Sbjct: 108 KVHITMTNNCNMRCPHCFVSA--GIVEKQELKVEEILAVVERIKEINGLTDIVVSGGEPL 165 Query: 156 ILS 158 I S Sbjct: 166 IHS 168 >gi|239623774|ref|ZP_04666805.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239521805|gb|EEQ61671.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 448 Score = 42.8 bits (100), Expect = 0.084, Method: Composition-based stats. Identities = 33/192 (17%), Positives = 58/192 (30%), Gaps = 24/192 (12%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 I +Q + K ++ + D + Y LK+ C C +C Sbjct: 111 IVKQVLEGKGITHLTSFHDLGELPDTQAGRVVTTGGYY---AFLKIAEGCDKRCTYCIIP 167 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH----KRLQKVLKTLRY 171 + G + + + + ++ L K L K+L L Sbjct: 168 YLRGPYR--SVPMEQLLEEARQLASGGVKELILVAQETTLYGKDIYGGKSLPKLLHELAQ 225 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHP-YEF---------S 220 I +Q +R P+ I ELI+ ++ K Y+ I H Sbjct: 226 IPGIQWIRIQ----YCYPEEITDELIEAIRSEEKVCHYLDIPIQHASNRILKRMGRRTNR 281 Query: 221 EEAIAAISRLAN 232 EE I++L Sbjct: 282 EELTERIAKLRK 293 >gi|331649321|ref|ZP_08350407.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli M605] gi|331041819|gb|EGI13963.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli M605] Length = 445 Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + +R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RNRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSGPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|301060145|ref|ZP_07201012.1| radical SAM domain protein [delta proteobacterium NaphS2] gi|300445657|gb|EFK09555.1| radical SAM domain protein [delta proteobacterium NaphS2] Length = 295 Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats. Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 12/90 (13%) Query: 97 ILLKLLHVCPVY-CRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 ILL++ C C FC + T+LS D A Y++ + +I G Sbjct: 21 ILLQVTLGCSHNKCTFCGTYTDKRFTIKDDKTILS--DILFASKYMKRQDRI---FLMDG 75 Query: 153 DPLILSHKRLQKVLKTLRYIKHV-QILRFH 181 D LI+ KRL +L +R +H+ I R Sbjct: 76 DALIIPQKRLMWILDRIR--EHLPWIKRVG 103 >gi|237813219|ref|YP_002897670.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei MSHR346] gi|237506155|gb|ACQ98473.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei MSHR346] Length = 377 Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 21/131 (16%) Query: 55 PIARQFIPQ-----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 P++R+ IP +L+ P + D PL+ + + + C C Sbjct: 7 PMSRRIIPVTPVSAAPDLSGAPLTPTGTLRDALARPLRDLR--------ISVTDRCNFRC 58 Query: 110 RFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 +C R + G +L+ ++ E + ++ TGG+PL+ K L+ Sbjct: 59 VYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPLL--RKNLEF 115 Query: 165 VLKTLRYIKHV 175 +++ L + V Sbjct: 116 LIERLANMTTV 126 >gi|255691222|ref|ZP_05414897.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides finegoldii DSM 17565] gi|260623136|gb|EEX46007.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides finegoldii DSM 17565] Length = 163 Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C +C C E + G L+ + ++ + I+ + V F+GGDP L Sbjct: 35 GCSHHCPGCHNPESWNPEAGERLTEEKIQSIIKEIKANPLLDGVTFSGGDPFYNPEAFL 93 >gi|254521757|ref|ZP_05133812.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas sp. SKA14] gi|219719348|gb|EED37873.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas sp. SKA14] Length = 326 Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 61/175 (34%), Gaps = 13/175 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L L C C +C + L + + + ++ TGG+P + Sbjct: 17 LSLTEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAA-LGMSKIRLTGGEPSLRK 75 Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHA 213 L +++ T+ + ++ + + +P P R + ++ + Sbjct: 76 D--LDEIIATVAAVPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFRTIT 133 Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDD--PEILANLMRTFVELR 265 H E ++ G+ + +VLL+G+NDD P+ + L +R Sbjct: 134 GHDR--LPEIEQGLALAQALGLPAIKLNAVLLRGLNDDELPQWMDYLRDRPFSVR 186 >gi|91203561|emb|CAJ71214.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 331 Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 69/187 (36%), Gaps = 32/187 (17%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R+P ++L++ H+C + C C R + T+ + I E V TG Sbjct: 25 RFPLVLMLEVTHLCNLACEGCGR---ILEYHDTMREMLSVGECMQAIHECPTP-VVTITG 80 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--GKPVYI 209 G+PL+ + K++ + IK + + + + L+ LK+ K + I Sbjct: 81 GEPLMHP--EIDKIISGI--IKEKRHVYLCTNGIL---------LVDALKKLKPHKYLNI 127 Query: 210 AIHANHPYE---------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPE-ILANLMR 259 +H + E + A AI AG + + + + K D E + L Sbjct: 128 NVHIDGLAETHDKIAGKGIFDRATNAIREAKKAGFKVCTNTTIFK---DTSEKEIVELFS 184 Query: 260 TFVELRI 266 L + Sbjct: 185 FLQGLGV 191 >gi|134299022|ref|YP_001112518.1| hypothetical protein Dred_1159 [Desulfotomaculum reducens MI-1] gi|134051722|gb|ABO49693.1| protein of unknown function DUF512 [Desulfotomaculum reducens MI-1] Length = 439 Score = 42.8 bits (100), Expect = 0.085, Method: Composition-based stats. Identities = 37/185 (20%), Positives = 63/185 (34%), Gaps = 60/185 (32%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + C C FCF +M S + ++ YI++ Sbjct: 84 FGPIRRCHNRCLFCFVDQMAPSMRESL-----------YIKDD----------------- 115 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 RL + +V+ + EL + + + P+YI++H + E Sbjct: 116 DYRLSFWQGNFVSLTNVK----------------DEELKRIIDQKLGPLYISVHTTNS-E 158 Query: 219 F---------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVE 263 + + + + LA AGI + +Q VL GIND E+ LA L Sbjct: 159 LRCRMLNNRHAGKILEQLKMLAEAGIEMQTQVVLCPGINDGEELKRTIRDLALLWPQVHS 218 Query: 264 LRIKP 268 L + P Sbjct: 219 LAVVP 223 >gi|167947811|ref|ZP_02534885.1| hypothetical protein Epers_15217 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 213 Score = 42.8 bits (100), Expect = 0.086, Method: Composition-based stats. Identities = 39/168 (23%), Positives = 64/168 (38%), Gaps = 26/168 (15%) Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 Q + ++ +LNI+P+ + + G++ R R +K+ C C FC V Sbjct: 45 QIVQRELDLNIMPQ----SVTEEESG---GLLARGRQRAFIKVQDGCRYRCTFCI----V 93 Query: 119 GSQKGTVLSSKDTEAALAYI-QEKSQ-IWEVIFTG---GDPLILSHKRLQKVLKTLRYIK 173 +G S E +A I + S+ I EV+ TG G L +++ + Sbjct: 94 TLARGEERSRPADEEVIAEINRLHSEGIQEVVLTGVHLGGYGSDIDSDLGQLIDRVLADS 153 Query: 174 HVQILRFHSRVPIVDPQ---------RINPELIQCLKEAGKPVYIAIH 212 + LR S P P R P L L + + + IA H Sbjct: 154 EIPRLRVGSLEPWDLPDNFWSRFDNPRFMPHLHLPL-QRRQRLCIATH 200 >gi|320449128|ref|YP_004201224.1| radical SAM domain-containing protein [Thermus scotoductus SA-01] gi|320149297|gb|ADW20675.1| radical SAM domain protein [Thermus scotoductus SA-01] Length = 356 Score = 42.8 bits (100), Expect = 0.087, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 16/126 (12%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +HR+P + ++ C + C+ C R V L++++ L + + ++ Sbjct: 5 LHRFPLLVAWEMTRACLLACQHC-RASAVPDPLPGELTTEEGLRLLEELATYTPKPILLP 63 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQCLKEAG-K 205 TGGDPL L +L+ + R +V P V P R+ E+++ KE Sbjct: 64 TGGDPLARPDLFL--LLEEAK--------RLGLKVGITPAVTP-RLTREVVERFKELSVH 112 Query: 206 PVYIAI 211 + I++ Sbjct: 113 QMAISL 118 >gi|167570715|ref|ZP_02363589.1| molybdenum cofactor biosynthesis protein A [Burkholderia oklahomensis C6786] Length = 363 Score = 42.8 bits (100), Expect = 0.087, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 31/189 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + G +L+ ++ E + ++ TGG+ Sbjct: 34 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 92 Query: 154 PLILSHKRLQKVLKTLRYIKHV----QILRFHSR-VPIVDPQ---------RINPELIQC 199 PL+ K ++ +++ L + V + + +V R+ L Sbjct: 93 PLL--RKNIEFLIERLARMTTVAGRPLDITLTTNGSLLVRKAKSLRDAGLSRVTVSLDAL 150 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLM 258 K + N S + + I AG + V+ +G ND + + Sbjct: 151 DDALFKRM------NDADFASADVLDGIFAAQAAGLAPVKVNMVVKRGTNDC--EIVPMA 202 Query: 259 RTFVELRIK 267 R F + Sbjct: 203 RRFKGTGVV 211 >gi|53720059|ref|YP_109045.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei K96243] gi|53725728|ref|YP_102316.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei ATCC 23344] gi|254199210|ref|ZP_04905576.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei FMH] gi|254205515|ref|ZP_04911867.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei JHU] gi|254296849|ref|ZP_04964302.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 406e] gi|52210473|emb|CAH36456.1| putative molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei K96243] gi|52429151|gb|AAU49744.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei ATCC 23344] gi|147748806|gb|EDK55880.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei FMH] gi|147752958|gb|EDK60023.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei JHU] gi|157807170|gb|EDO84340.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 406e] Length = 360 Score = 42.8 bits (100), Expect = 0.087, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + G +L+ ++ E + ++ TGG+ Sbjct: 31 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 89 Query: 154 PLILSHKRLQKVLKTLRYIKHV 175 PL+ K L+ +++ L + V Sbjct: 90 PLL--RKNLEFLIERLANMTTV 109 >gi|282856153|ref|ZP_06265436.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pyramidobacter piscolens W5455] gi|282585912|gb|EFB91197.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Pyramidobacter piscolens W5455] Length = 435 Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats. Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 21/138 (15%) Query: 61 IPQKEELNILPEER-----EDP--IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113 +P E + +E+ +DP + + +P + ++P + + + H C +C +C Sbjct: 108 VPDALETAMSGDEKIVLLDDDPRELHELRFAP---LERQFPWKASVMISHGCDNFCTYCI 164 Query: 114 ----RREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 R ++S + E + I Q V G D L +L Sbjct: 165 VPYVRGRFASRSPREIMSEAEQLVEGGVKEICLLGQ--NVDTYGKD---LDRYSFADLLN 219 Query: 168 TLRYIKHVQILRFHSRVP 185 + +IK ++ LRF + P Sbjct: 220 DVAHIKGLERLRFMTSYP 237 >gi|228960999|ref|ZP_04122629.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar pakistani str. T13001] gi|228798716|gb|EEM45699.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar pakistani str. T13001] Length = 339 Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177 >gi|228955004|ref|ZP_04117021.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|229072231|ref|ZP_04205438.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus F65185] gi|229081982|ref|ZP_04214473.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock4-2] gi|228701359|gb|EEL53854.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock4-2] gi|228710888|gb|EEL62856.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus F65185] gi|228804731|gb|EEM51333.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 339 Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177 >gi|229193012|ref|ZP_04319968.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 10876] gi|228590459|gb|EEK48322.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus ATCC 10876] Length = 339 Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177 >gi|168181641|ref|ZP_02616305.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf] gi|237796408|ref|YP_002863960.1| MiaB family RNA modification protein [Clostridium botulinum Ba4 str. 657] gi|182675137|gb|EDT87098.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf] gi|229261767|gb|ACQ52800.1| RNA modification enzyme, MiaB family [Clostridium botulinum Ba4 str. 657] Length = 432 Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats. Identities = 25/133 (18%), Positives = 49/133 (36%), Gaps = 21/133 (15%) Query: 90 VHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIW 145 + Y D R LK+ C +C +C ++ +G V S K + + + Sbjct: 135 IEEYRDKTRAFLKIQDGCNRFCSYC----LIPFARGAVCSKKPEKIMEEVEKLSKH-GFK 189 Query: 146 EVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 E+I +G D L +L+ + ++ ++ +R S +DP E I + Sbjct: 190 EIILSGIDIASYGFDLEGKYNLTSILEEIDKVEGIERIRIGS----IDPTFFTEEEIIGI 245 Query: 201 KEAGKPVYIAIHA 213 + + H Sbjct: 246 SKLKR---FCPHF 255 >gi|206969465|ref|ZP_03230419.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134] gi|206735153|gb|EDZ52321.1| molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1134] Length = 334 Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 15 ISVIDRCNFRCTYCMPAEIFGPEYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 73 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 74 PLLRKD--LTKLIARLVKIDGLIDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 125 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 126 AIDDDIFKNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 172 >gi|160944519|ref|ZP_02091747.1| hypothetical protein FAEPRAM212_02032 [Faecalibacterium prausnitzii M21/2] gi|158444301|gb|EDP21305.1| hypothetical protein FAEPRAM212_02032 [Faecalibacterium prausnitzii M21/2] Length = 325 Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 65/168 (38%), Gaps = 17/168 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + +C + CR+C + ++ VL+ ++ A + I V TGG+PL+ Sbjct: 14 LSVTDLCNLRCRYCMPDGVEKLEREAVLTYEEFLRLAALFAQC-GIDTVRVTGGEPLV-- 70 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216 K + +++ L+ ++ + + + +L L V I++ P Sbjct: 71 RKNVAQLVAGLKATPGIRRVTLTTNA-----MLLAEQLSALLDAGLDSVNISLDTLRPEV 125 Query: 217 -YEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANL 257 + + A + +G+ + V G+N+ E LA L Sbjct: 126 FRQITARDDFAAVQAGLQAALESGLPVKLNCVPQAGVNEGELETLAAL 173 >gi|148265592|ref|YP_001232298.1| molybdenum cofactor biosynthesis protein A [Geobacter uraniireducens Rf4] gi|146399092|gb|ABQ27725.1| GTP cyclohydrolase subunit MoaA [Geobacter uraniireducens Rf4] Length = 325 Score = 42.8 bits (100), Expect = 0.088, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 64/160 (40%), Gaps = 17/160 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C +C + + + S + +A S I ++ TGG+PL+ Sbjct: 16 LSVTDRCNMRCVYCMPADGIPLLTHNDILSYEELLLVAKTAVASGIEKIRVTGGEPLV-- 73 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPY 217 K + L L I ++ L + E+ + L++AG + I++ + P Sbjct: 74 RKGIVPFLTRLAAIPGLRQLVLTTNGL------YLAEMAESLRQAGVQRLNISLDSLQPE 127 Query: 218 EFSEEAIAA--------ISRLANAGIILLSQSVLLKGIND 249 F+ A I+ AG L V+++G+ND Sbjct: 128 TFAGITRGADLHRVMAGIAAAEQAGFPLKINVVVMRGVND 167 >gi|310821937|ref|YP_003954295.1| molybdenum cofactor biosynthesis protein moaa [Stigmatella aurantiaca DW4/3-1] gi|309395009|gb|ADO72468.1| Molybdenum cofactor biosynthesis protein MoaA [Stigmatella aurantiaca DW4/3-1] Length = 335 Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats. Identities = 36/223 (16%), Positives = 69/223 (30%), Gaps = 45/223 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C +C K +LS+ + E ++ I V TGG+PLI Sbjct: 28 LSVTDRCNFRCTYC--SPASWGGKKDLLSALEFERIVSVFASM-GIQRVRLTGGEPLIRP 84 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 + ++ + L + V+ + + N ++ L N Sbjct: 85 D--ILEIAQRLSALPGVERVAITT----------NASHLERLA-VPLREAGVSQLN--IS 129 Query: 219 FSEEAIAAISRLANAG-----------------IILLSQSVLLKGINDDPEILANLMRTF 261 + R++ G L V+++G+ND A L+ Sbjct: 130 LDTLSAETFRRISKQGDFASTLRGIDAAAAAGFASLKLNVVVMRGVNDGEA--AALVEYA 187 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL 304 + P + G + +++ L+ SGL Sbjct: 188 HARGLTP--RFIELMPFGQGE---PVPTA-ELIERLQA--SGL 222 >gi|121598421|ref|YP_993796.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei SAVP1] gi|124385812|ref|YP_001028740.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei NCTC 10229] gi|126451180|ref|YP_001081354.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei NCTC 10247] gi|242314341|ref|ZP_04813357.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 1106b] gi|251767263|ref|ZP_02266560.2| molybdenum cofactor biosynthesis protein A [Burkholderia mallei PRL-20] gi|254178129|ref|ZP_04884784.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei ATCC 10399] gi|254357683|ref|ZP_04973956.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei 2002721280] gi|121227231|gb|ABM49749.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei SAVP1] gi|124293832|gb|ABN03101.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei NCTC 10229] gi|126244050|gb|ABO07143.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei NCTC 10247] gi|148026810|gb|EDK84831.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei 2002721280] gi|160699168|gb|EDP89138.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei ATCC 10399] gi|242137580|gb|EES23982.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 1106b] gi|243063305|gb|EES45491.1| molybdenum cofactor biosynthesis protein A [Burkholderia mallei PRL-20] Length = 363 Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + G +L+ ++ E + ++ TGG+ Sbjct: 34 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 92 Query: 154 PLILSHKRLQKVLKTLRYIKHV 175 PL+ K L+ +++ L + V Sbjct: 93 PLL--RKNLEFLIERLANMTTV 112 >gi|298377685|ref|ZP_06987636.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_19] gi|298265388|gb|EFI07050.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_19] Length = 444 Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 11/123 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C YC +C G + ++S E A + E++ TG Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQE--VARKGGKEIVLTGVN 205 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + +++ L + + R S ++P I E I K Sbjct: 206 IGDFGKSTDETFIDLIRALDEVDGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260 Query: 211 IHA 213 H Sbjct: 261 FHI 263 >gi|295697132|ref|YP_003590370.1| Radical SAM domain protein [Bacillus tusciae DSM 2912] gi|295412734|gb|ADG07226.1| Radical SAM domain protein [Bacillus tusciae DSM 2912] Length = 394 Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 44/108 (40%), Gaps = 10/108 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 ++ ++ C ++C C + LS+++ L + E + V+ TGGDP Sbjct: 29 VIWEVTRACSLHCLHCRADAQF-RRDPRELSTEEGFRLLDELAEWK-VPLVVLTGGDPFE 86 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 + L + LR S P P R+ E ++ LKEAG Sbjct: 87 RPD------VFDLVRYGAERGLRM-SVTPSATP-RVTREALERLKEAG 126 >gi|255016549|ref|ZP_05288675.1| putative Fe-S oxidoreductase [Bacteroides sp. 2_1_7] Length = 444 Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 11/123 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C YC +C G + ++S E A + E++ TG Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQE--VARKGGKEIVLTGVN 205 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + +++ L + + R S ++P I E I K Sbjct: 206 IGDFGKSTDETFIDLIRALDEVDGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260 Query: 211 IHA 213 H Sbjct: 261 FHI 263 >gi|150006722|ref|YP_001301465.1| putative Fe-S oxidoreductase [Parabacteroides distasonis ATCC 8503] gi|149935146|gb|ABR41843.1| putative Fe-S oxidoreductase [Parabacteroides distasonis ATCC 8503] Length = 444 Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 11/123 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C YC +C G + ++S E A + E++ TG Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQE--VARKGGKEIVLTGVN 205 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + +++ L + + R S ++P I E I K Sbjct: 206 IGDFGKSTDETFIDLIRALDEVDGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260 Query: 211 IHA 213 H Sbjct: 261 FHI 263 >gi|152974241|ref|YP_001373758.1| YfkB-like domain-containing protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152022993|gb|ABS20763.1| YfkB-like domain protein [Bacillus cytotoxicus NVH 391-98] Length = 375 Score = 42.8 bits (100), Expect = 0.089, Method: Composition-based stats. Identities = 23/121 (19%), Positives = 42/121 (34%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L E L + E + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNPLPM---ELLLKRLDEVPHLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 +S K + + L H + +R +IN L L + P +H + Sbjct: 90 MSKKSVDNYVTPLLKYAHERGVR----------TQINSNLTIDLARYEQIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|323486989|ref|ZP_08092303.1| hypothetical protein HMPREF9474_04054 [Clostridium symbiosum WAL-14163] gi|323692033|ref|ZP_08106281.1| MiaB family RNA modification enzyme [Clostridium symbiosum WAL-14673] gi|323399701|gb|EGA92085.1| hypothetical protein HMPREF9474_04054 [Clostridium symbiosum WAL-14163] gi|323503956|gb|EGB19770.1| MiaB family RNA modification enzyme [Clostridium symbiosum WAL-14673] Length = 445 Score = 42.8 bits (100), Expect = 0.090, Method: Composition-based stats. Identities = 36/154 (23%), Positives = 54/154 (35%), Gaps = 27/154 (17%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGG 152 LK+ C C +C + G + + TEA Q ++ E G Sbjct: 146 AFLKISEGCNKRCTYCIIPSLRGPYRSVPMERLLTEAGQLAGQGVKELILVAQETTLYGT 205 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211 D + K L ++L+ L I ++ LR P+ I EL+Q +KE K Y+ I Sbjct: 206 D--LYGKKMLPELLRRLAEIPGIEWLRVQ----YCYPEEITEELVQVIKEEEKVCHYLDI 259 Query: 212 HANHP-------------YEFSEEAIAAISRLAN 232 H E E I+RL Sbjct: 260 PIQHASDRILKSMGRKTSRE---ELKERIARLRE 290 >gi|222475965|ref|YP_002564486.1| Radical SAM domain protein [Halorubrum lacusprofundi ATCC 49239] gi|222454336|gb|ACM58600.1| Radical SAM domain protein [Halorubrum lacusprofundi ATCC 49239] Length = 258 Score = 42.8 bits (100), Expect = 0.090, Method: Composition-based stats. Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 5/74 (6%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + C + C FC G + +D ++ + + Q V+ TGG+PLI Sbjct: 42 VFVRTSGCNLRCWFCDSYHTSWEPTG---AWRDVDSIIEEVHSHEQANHVVLTGGEPLIH 98 Query: 158 SHKRLQKVLKTLRY 171 ++L+ L Sbjct: 99 EESI--ELLERLAA 110 >gi|150018969|ref|YP_001311223.1| radical SAM domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905434|gb|ABR36267.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052] Length = 453 Score = 42.8 bits (100), Expect = 0.090, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 10/114 (8%) Query: 65 EELNILPEE----REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +E+ L EE ED + HS + Y I L ++H C + C++CF E Sbjct: 63 DEIQELAEEGILYSEDQYEEIAHSSMD--DRDYIKAICLNVIHGCNLRCKYCFADEGEYH 120 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171 G V+S+ + A+ Y+ ++S E+ GG+P L +++++K R Sbjct: 121 GHGGVMSADTAKKAIDYVIKRSGPRKNIEIDLFGGEP-TLIMDTIKEIIKYARD 173 >gi|268326277|emb|CBH39865.1| conserved hypothetical protein, radical SAM superfamily [uncultured archaeon] Length = 395 Score = 42.8 bits (100), Expect = 0.091, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 16/115 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 ++ ++ C + C C G + L+ ++ A + I I +FTGG+PL Sbjct: 77 VVWEMTGRCNLDCIHC---HAFGGEASYDELTEEEGRALIDQIAA-LDIRSFVFTGGEPL 132 Query: 156 ILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + L ++ + I V I + I E+ + L++ V I Sbjct: 133 LRED--LFDLIAYAKSIGFSVFIATNGT--------LITKEVAKLLRKYNVGVVI 177 >gi|268325167|emb|CBH38755.1| conserved hypothetical protein, radical SAM superfamily [uncultured archaeon] Length = 395 Score = 42.8 bits (100), Expect = 0.091, Method: Composition-based stats. Identities = 23/115 (20%), Positives = 44/115 (38%), Gaps = 16/115 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 ++ ++ C + C C G + L+ ++ A + I I +FTGG+PL Sbjct: 77 VVWEMTGRCNLDCIHC---HAFGGEASYDELTEEEGRALIDQIAA-LDIRSFVFTGGEPL 132 Query: 156 ILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + L ++ + I V I + I E+ + L++ V I Sbjct: 133 LRED--LFDLIAYAKSIGFSVFIATNGT--------LITKEVAKLLRKYNVGVVI 177 >gi|184155556|ref|YP_001843896.1| molybdenum cofactor biosynthesis protein A [Lactobacillus fermentum IFO 3956] gi|260662959|ref|ZP_05863852.1| molybdenum cofactor biosynthesis protein A [Lactobacillus fermentum 28-3-CHN] gi|226704822|sp|B2GCN4|MOAA_LACF3 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|183226900|dbj|BAG27416.1| molybdopterin precursor synthase MoaA [Lactobacillus fermentum IFO 3956] gi|260552580|gb|EEX25580.1| molybdenum cofactor biosynthesis protein A [Lactobacillus fermentum 28-3-CHN] Length = 332 Score = 42.8 bits (100), Expect = 0.091, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 4/92 (4%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R D + + + C + C +C +E + VLS + + + + +V T Sbjct: 10 RLHDYVRISITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLITNFAQ-LGVHKVRIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 GG+PL+ + +++ ++ I ++ + + Sbjct: 69 GGEPLLRTDVV--DIVRRIKEIDGIEDVSITT 98 >gi|160883454|ref|ZP_02064457.1| hypothetical protein BACOVA_01423 [Bacteroides ovatus ATCC 8483] gi|237720232|ref|ZP_04550713.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 2_2_4] gi|293371156|ref|ZP_06617693.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides ovatus SD CMC 3f] gi|156111174|gb|EDO12919.1| hypothetical protein BACOVA_01423 [Bacteroides ovatus ATCC 8483] gi|229450784|gb|EEO56575.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 2_2_4] gi|292633814|gb|EFF52366.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides ovatus SD CMC 3f] Length = 152 Score = 42.8 bits (100), Expect = 0.091, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 25/59 (42%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C +C C E + G L+ + ++ + I+ + V F+GGDP + L Sbjct: 25 GCSHHCPGCHNPESWNPRAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEEFL 83 >gi|15679546|ref|NP_276663.1| molybdenum cofactor biosynthesis protein A [Methanothermobacter thermautotrophicus str. Delta H] gi|2622671|gb|AAB86024.1| molybdenum cofactor biosynthesis MoaA [Methanothermobacter thermautotrophicus str. Delta H] Length = 316 Score = 42.8 bits (100), Expect = 0.091, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 30/164 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C V C +C R M S+ LS+ D E + + ++ +GG+PLI Sbjct: 27 LSITGRCNVNCIYCHRDGMTSSRGE--LSAADIEKLCR-VASDLGVGKIRLSGGEPLIRD 83 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 + ++++ + I + + + + L EAG + + + Sbjct: 84 D--IVEIVERINNIG-FRDISITTNG------TLLEGYSAALSEAGLD-RVNVSFDT--- 130 Query: 219 FSEEAIAAISR-----LANAGI---------ILLSQSVLLKGIN 248 + E I+R +GI + V+L+G+N Sbjct: 131 LNPETYRFITRKDYLERVKSGITSAVDVGLDPVKINMVILRGVN 174 >gi|227514963|ref|ZP_03945012.1| molybdenum (Mo2+) cofactor biosynthesis enzyme [Lactobacillus fermentum ATCC 14931] gi|227086662|gb|EEI21974.1| molybdenum (Mo2+) cofactor biosynthesis enzyme [Lactobacillus fermentum ATCC 14931] Length = 332 Score = 42.8 bits (100), Expect = 0.092, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 40/92 (43%), Gaps = 4/92 (4%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R D + + + C + C +C +E + VLS + + + + +V T Sbjct: 10 RLHDYVRISITDRCNLRCVYCMPKEGLPFFPTDRVLSQDEIVQLITNFAQ-LGVHKVRIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 GG+PL+ + +++ ++ I ++ + + Sbjct: 69 GGEPLLRTDVV--DIVRRIKEIDGIEDVSITT 98 >gi|126441374|ref|YP_001059824.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 668] gi|126220867|gb|ABN84373.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 668] Length = 377 Score = 42.8 bits (100), Expect = 0.092, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 21/131 (16%) Query: 55 PIARQFIPQ-----KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYC 109 P++R+ IP +L+ P + D PL+ + + + C C Sbjct: 7 PMSRRIIPVTPVSAAPDLSGAPLTPTGTLRDALARPLRDLR--------ISVTDRCNFRC 58 Query: 110 RFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK 164 +C R + G +L+ ++ E + ++ TGG+PL+ K L+ Sbjct: 59 VYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGEPLL--RKNLEF 115 Query: 165 VLKTLRYIKHV 175 +++ L + V Sbjct: 116 LIERLANMTTV 126 >gi|150018843|ref|YP_001311097.1| radical SAM domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149905308|gb|ABR36141.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052] Length = 288 Score = 42.8 bits (100), Expect = 0.092, Method: Composition-based stats. Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 5/78 (6%) Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGG 152 + +++++ C C FC M S+K T+ S +D +A + Y +E S + ++ G Sbjct: 14 NSLIIQVTLGCSHNKCNFC---NMYKSKKFTIKSLEDIKADVNYFREMYSYVEKIFLADG 70 Query: 153 DPLILSHKRLQKVLKTLR 170 D LI+ ++L+++L +R Sbjct: 71 DALIIPTEKLKEILTLIR 88 >gi|46447397|ref|YP_008762.1| putative 2-methylthioadenine synthetase [Candidatus Protochlamydia amoebophila UWE25] gi|46401038|emb|CAF24487.1| putative 2-methylthioadenine synthetase [Candidatus Protochlamydia amoebophila UWE25] Length = 434 Score = 42.4 bits (99), Expect = 0.093, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 22/163 (13%) Query: 60 FIPQKE-ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 IP +E E + ++ + + + + R +K+ C +C +C V Sbjct: 100 VIPNREKEQLLARLFPKENLPEFSITQFDS-----HTRAFIKVQDGCNSFCTYCII-PYV 153 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG-----DPLILS---HKRLQKVLKTLR 170 + + + E A A I E++ TG D + RL ++++ + Sbjct: 154 RGRSRSRSVEEVLEEAKALISN--GYKEIVLTGINIGDFDGKVAKGETPVRLSELVRMVD 211 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + ++ LR S +DP ++ EL + GK ++H Sbjct: 212 QLPGLERLRLSS----IDPDEVDDELSDAILN-GKHTCHSMHI 249 >gi|313904016|ref|ZP_07837396.1| MiaB-like tRNA modifying enzyme YliG [Eubacterium cellulosolvens 6] gi|313471165|gb|EFR66487.1| MiaB-like tRNA modifying enzyme YliG [Eubacterium cellulosolvens 6] Length = 453 Score = 42.4 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 15/126 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIFTGG 152 LK+ C +C +C +M G + + +D + ++ E G Sbjct: 148 LKIAEGCDRHCTYCAIPDMRGPYR--SVPMEDLLEEARGLAADGVKELILVAQETTLYGT 205 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211 D + + KRL +LK L I+ + +R V P+ I PELIQ +KE K Y+ I Sbjct: 206 D--LYNEKRLHILLKELCKIEDIHWIR----VLYCYPEEIYPELIQTMKEEPKICHYMDI 259 Query: 212 HANHPY 217 H Sbjct: 260 PIQHAN 265 >gi|285017403|ref|YP_003375114.1| molybdenum cofactor biosynthesis protein a [Xanthomonas albilineans GPE PC73] gi|283472621|emb|CBA15126.1| probable molybdenum cofactor biosynthesis protein a [Xanthomonas albilineans] Length = 344 Score = 42.4 bits (99), Expect = 0.095, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 28/176 (15%) Query: 94 PDRIL----LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIW 145 R L L ++ C C +C + V G LS E + Sbjct: 18 RGRALHDLRLSVIEACNFRCGYCMPADKVPDDYGFDAAGRLSFAQIETLARAFVRN-GVR 76 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 ++ TGG+PL+ + L ++++ L I V+ L + + Q L++AG Sbjct: 77 KLRLTGGEPLL--RRELPELVRRLARIAGVEDLAMTTNGV------LLATHAQALRDAGL 128 Query: 206 P-VYIAIHANHP---YEFS------EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 V +++ A P + S + +A I AG+ + V+ +G+NDD Sbjct: 129 QRVTVSLDAIDPLLFRQLSGGRGEIAQVLAGIDAAVAAGLGPVKLNCVVQRGVNDD 184 >gi|326796263|ref|YP_004314083.1| (dimethylallyl)adenosine tRNA methylthiotransferase miaB [Marinomonas mediterranea MMB-1] gi|326547027|gb|ADZ92247.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Marinomonas mediterranea MMB-1] Length = 450 Score = 42.4 bits (99), Expect = 0.096, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 45/125 (36%), Gaps = 19/125 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDP 154 + ++ C YC FC V S+ E L + + S+ + E+ G + Sbjct: 148 AFVSVMEGCSKYCTFC-----VVPYTRGEEVSRPYEDVLKEVAQLSEQGVREIHLLGQNV 202 Query: 155 LILSHKR-------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + L ++ + I+ V+ +RF + P+ LI+ + K + Sbjct: 203 NAYRGETQDGDEADLADIIHAIARIEGVERIRFTTSHPV----EFTDSLIEAFRTEPK-L 257 Query: 208 YIAIH 212 +H Sbjct: 258 VSHLH 262 >gi|52081091|ref|YP_079882.1| hypothetical protein BL02101 [Bacillus licheniformis ATCC 14580] gi|52786470|ref|YP_092299.1| YqeV [Bacillus licheniformis ATCC 14580] gi|319644951|ref|ZP_07999184.1| hypothetical protein HMPREF1012_00217 [Bacillus sp. BT1B_CT2] gi|52004302|gb|AAU24244.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580] gi|52348972|gb|AAU41606.1| YqeV [Bacillus licheniformis ATCC 14580] gi|317392760|gb|EFV73554.1| hypothetical protein HMPREF1012_00217 [Bacillus sp. BT1B_CT2] Length = 451 Score = 42.4 bits (99), Expect = 0.096, Method: Composition-based stats. Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G +L S+D E + Q+ + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIRQAQQLVDAGYKEIVLTG 196 Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + ++LK L +K ++ +R S ++ +I E+I+ L + Sbjct: 197 IHTGGYGED---MKDYNFAQLLKELDSRVKGLKRIRISS----IEASQITDEVIEVLDRS 249 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 250 DK-IVRHLHI 258 >gi|254302542|ref|ZP_04969900.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] gi|148322734|gb|EDK87984.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium nucleatum subsp. polymorphum ATCC 10953] Length = 348 Score = 42.4 bits (99), Expect = 0.097, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 19/126 (15%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148 ++ + + CP C FC ++++ G + +S D + + Y++ I +V Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH------VQILRFHSRVPIVDPQRINPELIQCLKE 202 F GG LQK + L +KH V+ +R +R P+ I+ E++ LK+ Sbjct: 60 FFGG-TFTGISMNLQK--EYLEVVKHYIDNNDVEGVRISTR-----PECIDDEILTQLKK 111 Query: 203 AGKPVY 208 G Sbjct: 112 YGVKTI 117 >gi|108801200|ref|YP_641397.1| radical SAM family protein [Mycobacterium sp. MCS] gi|119870351|ref|YP_940303.1| radical SAM domain-containing protein [Mycobacterium sp. KMS] gi|126437180|ref|YP_001072871.1| radical SAM domain-containing protein [Mycobacterium sp. JLS] gi|108771619|gb|ABG10341.1| Radical SAM [Mycobacterium sp. MCS] gi|119696440|gb|ABL93513.1| Radical SAM domain protein [Mycobacterium sp. KMS] gi|126236980|gb|ABO00381.1| Radical SAM domain protein [Mycobacterium sp. JLS] Length = 514 Score = 42.4 bits (99), Expect = 0.097, Method: Composition-based stats. Identities = 37/198 (18%), Positives = 67/198 (33%), Gaps = 42/198 (21%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKD 130 DPI L + ++ +L + C + C CF V + + Sbjct: 90 DPIPQAYLRGLPEMQTQHTCILLQDISDTCNLRCPTCFTESSPDLRNVVPVAEVLANVDQ 149 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL------RFHSRV 184 +E ++ V+ +GG+P + RL ++L L +IL R + Sbjct: 150 RLR-----RENGRLDVVMLSGGEPTLHP--RLAELLTELVDRPITRILVNTNGVRIAT-- 200 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE----------FSEEAIAAISRLANAG 234 + L+ L + V + + + E AA+ RL+ Sbjct: 201 --------DDALLDLLTAHRERVEVYLQYDGLSEAAHRHHRGGDLRRIKRAALQRLSERE 252 Query: 235 I--ILLSQSVLLKGINDD 250 I L+ + L G+NDD Sbjct: 253 IFTTLVMTTAL--GVNDD 268 >gi|46581406|ref|YP_012214.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450828|gb|AAS97474.1| radical SAM domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|311235063|gb|ADP87917.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1] Length = 370 Score = 42.4 bits (99), Expect = 0.098, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 20/180 (11%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWEVIF 149 +P R+ L+L + C C C R G D + AL I + +F Sbjct: 86 FPQRLQLELTNCCNNDCVMCPRH---GGHFTRKPKHMDLDLVRRALDEIAQHYNYQLQLF 142 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 G+PL+ R+ ++L L + S+ + P + L + + Sbjct: 143 HIGEPLLHP--RIFEILDMLEDYPTLGRKWISSKGQELTPDIMRRVLTSKVDYFNYSLLA 200 Query: 210 AIHANHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 A + + RLA+ L Q L+ + + E+ Sbjct: 201 MTPATYAR-IVPNGDYATVRGNLERLADLKRDLGVQRPYLR------AQMIEMDEALHEI 253 >gi|20094510|ref|NP_614357.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19] gi|19887619|gb|AAM02287.1| Predicted Fe-S oxidoreductase [Methanopyrus kandleri AV19] Length = 499 Score = 42.4 bits (99), Expect = 0.098, Method: Composition-based stats. Identities = 41/174 (23%), Positives = 66/174 (37%), Gaps = 38/174 (21%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPL 155 ++ + + C + C CF S + E L ++ + + V F GG+PL Sbjct: 96 IIDVTNRCNMNCPVCFANAEAKGYV-YEPSLEQIEEMLDLLRSERPVPAPAVQFAGGEPL 154 Query: 156 ILSHKRLQKVLKTLRYIK----HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + +++ + HVQI V+ R NPEL + L AG V + + Sbjct: 155 VRED-----IVEIVAAADERGFHVQIATNG-----VEFAR-NPELAEDLHAAGLNV-VYL 202 Query: 212 HANHPY-EFSEEAI----------AAISRLANAGIILLSQSVLL----KGINDD 250 + E EE AI L GI +VL+ +G+NDD Sbjct: 203 QFDGLNPEIYEEIRGSRKVLELKKEAIKVLEREGIS----TVLVPTLARGVNDD 252 >gi|51892771|ref|YP_075462.1| 2-methylthioadenine synthetase [Symbiobacterium thermophilum IAM 14863] gi|81388877|sp|Q67NX5|RIMO_SYMTH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|51856460|dbj|BAD40618.1| 2-methylthioadenine synthetase [Symbiobacterium thermophilum IAM 14863] Length = 485 Score = 42.4 bits (99), Expect = 0.098, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 12/110 (10%) Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFT 150 LK+ C C FC R +++ A + ++E I + + Sbjct: 163 TAYLKIAEGCDCACAFCSIPLMRGRHRSRPIESIVDEARRLAGMG-VRELVVISQDTTYY 221 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 G D + L ++L+ L + ++ +R H P RI ELI+ + Sbjct: 222 GLD--LYRKPMLARLLRELAQVDGIRWIRIHYS----YPTRITDELIEVI 265 >gi|310828246|ref|YP_003960603.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium limosum KIST612] gi|308739980|gb|ADO37640.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Eubacterium limosum KIST612] Length = 439 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 55/140 (39%), Gaps = 18/140 (12%) Query: 72 EEREDPIGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 ER I D++H ++ + +YP + + +++ C +C +C + S+ Sbjct: 123 GERIFEIWDDSHEIIEDLPVDRKYPFKSFVTIMNGCNNFCTYC-----IVPYTRGREVSR 177 Query: 130 DTEAALAYIQ--EKSQIWEVIFTGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHS 182 E + + EV G + + +L+ L I+ ++ +RF + Sbjct: 178 QPEKIIEEVTRLADEGCLEVTLLGQNVNSYGNDLKTGYHFADLLRDLNQIEKIKRIRFMT 237 Query: 183 RVPIVDPQRINPELIQCLKE 202 P+ + E+I+ + + Sbjct: 238 SH----PKDLTDEVIEAIAQ 253 >gi|256751942|ref|ZP_05492812.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749147|gb|EEU62181.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 522 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 66/160 (41%), Gaps = 25/160 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +++ + C C FC +G + S D + + +++ + + + TGG+PLI Sbjct: 206 VIIGITRECNGNCNFC----QIGGPQKDTNKSFDCKQLVRFLKGNN--YHIQITGGEPLI 259 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-----KPVYIAI 211 L +++ L+ H+ + + + + I+ E I+ LKE+ V I Sbjct: 260 -RKSELTPLIRELKKDGHI--ITLLTNLVL-----IDREFIELLKESFSVLDVVQVSIYA 311 Query: 212 HANHPYEFS------EEAIAAISRLANAGIILLSQSVLLK 245 H +E + I+ + N GI L + VL K Sbjct: 312 HNPQLHEIISGRNDWSKLNTLITEVINNGIQLRANLVLTK 351 >gi|119897898|ref|YP_933111.1| molybdenum cofactor biosynthesis protein A [Azoarcus sp. BH72] gi|119670311|emb|CAL94224.1| molybdenum cofactor biosynthesis protein A [Azoarcus sp. BH72] Length = 357 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 71/181 (39%), Gaps = 33/181 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C RE+ +G +LS ++ + + ++ TGG+ Sbjct: 39 ISVTDRCNFRCVYCMPREVFDKDYPFLPRGQLLSFEEILRVARLFVAR-GVRKIRITGGE 97 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI---- 209 PL+ ++++++ L + V+ L + + P L + L++AG Sbjct: 98 PLLRKD--IERLVEMLAALDGVE-LTLTTNGV------LLPRLAKKLRDAGLHRVTVSLD 148 Query: 210 ---------AIHANHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGIND-DPEILANLM 258 A++P E + I+ +AG + V+ +G ND D E +A Sbjct: 149 ALDDATFRRMNDADYPVE---RVLEGIAAARDAGFEGIKVNMVVKRGTNDQDIEAMAQHF 205 Query: 259 R 259 R Sbjct: 206 R 206 >gi|310658041|ref|YP_003935762.1| radical sam domain-containing protein [Clostridium sticklandii DSM 519] gi|308824819|emb|CBH20857.1| Radical SAM domain protein [Clostridium sticklandii] Length = 304 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 44/210 (20%), Positives = 76/210 (36%), Gaps = 38/210 (18%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI- 138 D + + +KGI+ + L C C +C R + E A+ + Sbjct: 14 DMHFTKVKGILSPKNG---MNLYRGCTHGCIYCDSRSTCYQMNHKFEDIEIKENAIELLE 70 Query: 139 ----QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH----SRVPIVDPQ 190 +++ + + + DP I +L+ K L V RF ++ IV Sbjct: 71 DALKRKRKKCMIGMGSMTDPYIPEEIKLKHTRKALEV---VSRYRFGITLITKSNIVL-- 125 Query: 191 RINPELIQCLKEAGKPVYIAIHANHPYEF----------SEEAIAAISRLANAGII-LLS 239 R + +L++ + E K V + E ++E A+ L +AGI ++ Sbjct: 126 R-DLDLLKEINEKTKCVVQMTLTTYDEELCKEIEPNVSTTKERFEALLTLRDAGIPTVVW 184 Query: 240 QSVLLKGINDDPEILANLMRTFVELRIKPY 269 + LL IND E L L I Y Sbjct: 185 LTPLLPYINDTEENL---------LGILNY 205 >gi|288801250|ref|ZP_06406705.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 299 str. F0039] gi|288331861|gb|EFC70344.1| 2-methylthioadenine synthetase [Prevotella sp. oral taxon 299 str. F0039] Length = 447 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 50/125 (40%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C +C G + +SS + E A + E++ TG Sbjct: 154 RTRYFLKVQDGCSYFCTYCTIPFARGFSRNPSISSLVEQAEQA-----AREGGKEIVLTG 208 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GD + +++ ++K L ++ ++ R S ++P ++ E+I+ + Sbjct: 209 VNIGDFGVSTNETFFDLIKALDKVEGIKRFRISS----LEPDLLSDEIIEYCANSR---A 261 Query: 209 IAIHA 213 H Sbjct: 262 FMPHF 266 >gi|282856950|ref|ZP_06266205.1| radical SAM domain protein [Pyramidobacter piscolens W5455] gi|282585241|gb|EFB90554.1| radical SAM domain protein [Pyramidobacter piscolens W5455] Length = 344 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 29/153 (18%), Positives = 49/153 (32%), Gaps = 29/153 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV-------IFTG 151 + C C+ C+ + ++S + V TG Sbjct: 9 WHITDDCDQRCKHCY---IYSGGAKRCVNSMSWAQMEDVLANCHDFCSVYRRRPYFYITG 65 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG---KPVY 208 GDP++ ++LK LR + V + +P ++ + LKE G + Sbjct: 66 GDPILHPD--FWRLLKKLRKMD-------APFVILGNPFHLDDTVCARLKELGCEQYQLS 116 Query: 209 I----AIH--ANHPYEFSEEAIAAISRLANAGI 235 + H P F + IS L AGI Sbjct: 117 LDGLRETHDWFRRPGSFDC-TLEKISALKKAGI 148 >gi|282163555|ref|YP_003355940.1| hypothetical protein MCP_0885 [Methanocella paludicola SANAE] gi|282155869|dbj|BAI60957.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 375 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 17/115 (14%), Positives = 44/115 (38%), Gaps = 13/115 (11%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R P + +++ C + C +C + L ++ + + + +V + Sbjct: 5 RSPRSVDIEITGKCNLRCLYC--SHFTSASDISNDLPKEEWLEFFKGL-NRCSVMDVTLS 61 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 GG+P S ++++++ + + +RF + + I EL L + Sbjct: 62 GGEPFCRSD--IREIIEGII----LNRMRF---SILTNGTLITDELAAFLSSTRR 107 >gi|270295900|ref|ZP_06202100.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. D20] gi|270273304|gb|EFA19166.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. D20] Length = 438 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 55/137 (40%), Gaps = 8/137 (5%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C YC +C G + ++S +A+ A + +I GD Sbjct: 148 RTRFFLKVQDGCDYYCSYCTIPFARGRSRNGSIASMVEQASQAAAEGGKEIVLTGVNIGD 207 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + + ++K L ++ ++ R S ++P + E+I+ + + + H Sbjct: 208 FGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEYVSRSRR---FMPHF 260 Query: 214 NHP-YEFSEEAIAAISR 229 + P S+E + + R Sbjct: 261 HIPLQSGSDEVLKLMRR 277 >gi|256545382|ref|ZP_05472745.1| Fe-S oxidoreductase [Anaerococcus vaginalis ATCC 51170] gi|256398943|gb|EEU12557.1| Fe-S oxidoreductase [Anaerococcus vaginalis ATCC 51170] Length = 432 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 16/118 (13%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGG 152 R +K+ C +YC +C ++S+D + + + + E++ TG Sbjct: 142 TRAYIKIQDGCNMYCSYCLI-----PYARGNIASRDLVSIIDEAKRLRDNGYKEIVLTGI 196 Query: 153 DPLILS-----HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L V++ + I ++ +R S ++P+ I+ E ++ +K+ K Sbjct: 197 HVASYGKDFDLDISLIDVIEHIAKIDGIERIRLSS----MEPRHIDREFLKRMKDTKK 250 >gi|226324639|ref|ZP_03800157.1| hypothetical protein COPCOM_02424 [Coprococcus comes ATCC 27758] gi|225207087|gb|EEG89441.1| hypothetical protein COPCOM_02424 [Coprococcus comes ATCC 27758] Length = 441 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 26/133 (19%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C G + +D + + E EV+ TG Sbjct: 144 HTRAYLKVQDGCNQFCTYCIIPYARGRVRSR--KKEDVVEEVRTLAEH-GYQEVVLTGI- 199 Query: 154 PLILSHKRLQK-------------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 LS L+ +++ + ++ ++ +R S ++P+ + E + L Sbjct: 200 --HLSSYGLEWKDENGKQTEGLLDLIRAVHGVEGIKRIRLGS----LEPRIVTEEFAKEL 253 Query: 201 KEAGKPVYIAIHA 213 K I H Sbjct: 254 ACLPK---ICPHF 263 >gi|220903851|ref|YP_002479163.1| Radical SAM domain-containing protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219868150|gb|ACL48485.1| Radical SAM domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 296 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 42/200 (21%), Positives = 66/200 (33%), Gaps = 54/200 (27%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 HR R L + C V C F RR G + + EAAL +++ Sbjct: 18 AHRSFGRAHLPVAAGCNVQCGFYDRRYSCVNESRPGVTARLLEPEEALEAALRAVKQMPH 77 Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVP---------------- 185 + + G GDPL + + L L+ LR + H+ + + Sbjct: 78 LSVIGIAGPGDPLADAGRTLHT-LEALRKALPHILLC-LSTNGLALPLHAAALSSLGVGH 135 Query: 186 ------IVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA---------ISRL 230 VDP I ++ + + + AA I RL Sbjct: 136 VTVTVNAVDPS-IGADIYTWVSDG------------ARRLTGTDAAALLLERQEEGIRRL 182 Query: 231 ANAGIILLSQSVLLKGINDD 250 AG+ + SV++ GIND Sbjct: 183 KAAGVTVKINSVVIPGINDR 202 >gi|190574699|ref|YP_001972544.1| putative molybdenum cofactor biosynthesis protein A [Stenotrophomonas maltophilia K279a] gi|226707389|sp|B2FUM0|MOAA_STRMK RecName: Full=Molybdenum cofactor biosynthesis protein A gi|190012621|emb|CAQ46249.1| putative molybdenum cofactor biosynthesis protein A [Stenotrophomonas maltophilia K279a] Length = 326 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 55/158 (34%), Gaps = 11/158 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L L C C +C + L + + + ++ TGG+P + Sbjct: 17 LSLTEACNFRCSYCLPDGYQADGRPRFLQVDEIARLVRAFAA-LGMSKIRLTGGEPSLRK 75 Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHA 213 L +++ T+ + ++ + + +P P R + ++ + Sbjct: 76 D--LDEIIATVAAVPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFKTIT 133 Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDD 250 H E ++ G+ + +VLL+G+NDD Sbjct: 134 GHDR--LPEIEQGLALAQALGLPAIKLNAVLLRGLNDD 169 >gi|167903657|ref|ZP_02490862.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei NCTC 13177] Length = 370 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + G +L+ ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99 Query: 154 PLILSHKRLQKVLKTLRYIKHV 175 PL+ K L+ +++ L + V Sbjct: 100 PLL--RKNLEFLIERLANMTTV 119 >gi|160890923|ref|ZP_02071926.1| hypothetical protein BACUNI_03368 [Bacteroides uniformis ATCC 8492] gi|317479661|ref|ZP_07938785.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 4_1_36] gi|156859922|gb|EDO53353.1| hypothetical protein BACUNI_03368 [Bacteroides uniformis ATCC 8492] gi|316904162|gb|EFV25992.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 4_1_36] Length = 438 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 55/137 (40%), Gaps = 8/137 (5%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C YC +C G + ++S +A+ A + +I GD Sbjct: 148 RTRFFLKVQDGCDYYCSYCTIPFARGRSRNGSIASMVEQASQAAAEGGKEIVLTGVNIGD 207 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + + ++K L ++ ++ R S ++P + E+I+ + + + H Sbjct: 208 FGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEYVSRSRR---FMPHF 260 Query: 214 NHP-YEFSEEAIAAISR 229 + P S+E + + R Sbjct: 261 HIPLQSGSDEVLKLMRR 277 >gi|158320492|ref|YP_001512999.1| radical SAM domain-containing protein [Alkaliphilus oremlandii OhILAs] gi|158140691|gb|ABW19003.1| Radical SAM domain protein [Alkaliphilus oremlandii OhILAs] Length = 342 Score = 42.4 bits (99), Expect = 0.099, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 30/186 (16%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPL 155 + CP C FC ++++ G + EA L ++++ ++ E+ F GG Sbjct: 10 IFIPHRGCPHDCSFCNQKKIAGIGTDVTAEQVLEIIEAQLEHLKDVNRPKEIAFYGG-SF 68 Query: 156 I-LSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--- 208 L +++ +++L + +Q +R +R P IN E++Q L G + Sbjct: 69 TGLPYEQQRQLLAMAYEKKKLNFIQDIRISTR-----PDYINEEILQLLGSYGVSIIELG 123 Query: 209 ------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQ-SVLLKGINDDPEILANLM 258 + N H E + A + + I L Q V L G D E + Sbjct: 124 VQSTDPTVLELNNRGHSKE---DVYRAAALIKKQNIQLGLQMMVGLYG--DTKEKMLRTA 178 Query: 259 RTFVEL 264 R ++ Sbjct: 179 RDIIDC 184 >gi|313893435|ref|ZP_07827007.1| tRNA methylthiotransferase YqeV [Veillonella sp. oral taxon 158 str. F0412] gi|313442076|gb|EFR60496.1| tRNA methylthiotransferase YqeV [Veillonella sp. oral taxon 158 str. F0412] Length = 431 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 17/124 (13%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG-- 151 R +K+ C YC FC + L S+ E + + E++ TG Sbjct: 145 RAFMKIQEGCNNYCSFC-----IIPYTRGKLKSRKIEDIVEEAKRLVDHGFHEIVLTGIH 199 Query: 152 -GDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 G+ + R L V+K L I + +RF S ++ ++ EL++ L + K V Sbjct: 200 LGNYGVELPGRPTLADVVKALLEIPELYRIRFGS----IESVEVSDELVE-LMDTDKRVC 254 Query: 209 IAIH 212 +H Sbjct: 255 PNLH 258 >gi|187932620|ref|YP_001885098.1| hypothetical protein CLL_A0897 [Clostridium botulinum B str. Eklund 17B] gi|187720773|gb|ACD21994.1| conserved hypothetical protein [Clostridium botulinum B str. Eklund 17B] Length = 434 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 42/125 (33%), Gaps = 15/125 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C FC G+ + + + E EVI +G Sbjct: 141 KTRAFLKIQDGCNRFCTFCLIPYARGA--TCSKKPEKVLEEVKKLAEH-GFKEVILSGIH 197 Query: 154 PLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 L +L+ + I+ + +R S ++P E+I +K K Sbjct: 198 TASYGVDLGTGVTLISLLEDIEKIEGIDRVRIGS----IEPAFFTDEVINKIKNMKK--- 250 Query: 209 IAIHA 213 + H Sbjct: 251 LCPHF 255 >gi|330444283|ref|YP_004377269.1| MiaB-like tRNA modifying protein [Chlamydophila pecorum E58] gi|328807393|gb|AEB41566.1| MiaB-like tRNA modifying enzyme [Chlamydophila pecorum E58] Length = 425 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 15/112 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R +K+ C +C +C + G + L I+ + EV+ +G Sbjct: 138 KSRAFIKVQDGCNSFCSYCIIPYLRGRSVSRPS-----QEILEEIRTLIEGGYREVVISG 192 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 GD L +L+ + + ++ LR S +DP + +L Q L Sbjct: 193 INVGD-YSHEGDSLASLLRKIDMLPGLERLRVSS----IDPDDVQEDLCQAL 239 >gi|154253144|ref|YP_001413968.1| molybdenum cofactor biosynthesis protein A [Parvibaculum lavamentivorans DS-1] gi|154157094|gb|ABS64311.1| molybdenum cofactor biosynthesis protein A [Parvibaculum lavamentivorans DS-1] Length = 345 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 25/162 (15%), Positives = 63/162 (38%), Gaps = 21/162 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + + ++ TGG+PL+ Sbjct: 30 VSVTDRCDFRCVYCMSEHMNFLPKPELLTLEELDRVCSAFIA-KGVRKLRLTGGEPLVRR 88 Query: 159 H--KRLQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 ++ + + L + + + S++ R +L + + +++ Sbjct: 89 DVMTLIRSLGRHLESGALDELTLTTNGSQL-----ARYADDLHAA---GIRRINVSLDTL 140 Query: 215 HPY---EFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248 +P E + + + I+ AG+ + +V LKG+N Sbjct: 141 NPDLFAEITRWGRLPQVLDGIAAAKRAGLQIKINTVALKGVN 182 >gi|152991807|ref|YP_001357528.1| molybdenum cofactor biosynthesis protein A [Sulfurovum sp. NBC37-1] gi|166217892|sp|A6Q6R2|MOAA_SULNB RecName: Full=Molybdenum cofactor biosynthesis protein A gi|151423668|dbj|BAF71171.1| molybdenum cofactor biosynthesis protein A [Sulfurovum sp. NBC37-1] Length = 326 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 30/180 (16%), Positives = 67/180 (37%), Gaps = 15/180 (8%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C C++C + K +LS ++ + + + ++ TGG+PL+ Sbjct: 15 VSVTERCNFRCQYCMPEKPFSWVPKENLLSFEELFLFMK-VAMDEGVNKIRITGGEPLLR 73 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI------AI 211 L +K + K L + + PQ + ++ + + Sbjct: 74 ED--LDSFIKMIHDYKPDIDLALTTNAYL-LPQ--TAQKLKDAGLKRLNISLDSLKPEVA 128 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP--EILANLMRTFVELRIKPY 269 H + + + I + G+ + V LKGIND+ +++ M +++R Y Sbjct: 129 HQIAQKDVLGQVLKGIDKALEVGLGVKINMVPLKGINDNEILDVMEYCMDRNIKIRFIEY 188 >gi|20094416|ref|NP_614263.1| Fe-S oxidoreductase [Methanopyrus kandleri AV19] gi|19887500|gb|AAM02193.1| Predicted Fe-S oxidoreductase [Methanopyrus kandleri AV19] Length = 403 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 7/83 (8%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + R P+ + + + CP C C + T LS++D A+ + V Sbjct: 85 LGRRVPEAVTMAVTQRCPCNCVHCSADRR----RPTELSTEDWHRAIRE-ALDLGTYNVT 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171 FTGGDPL L ++++ + Sbjct: 140 FTGGDPLFRED--LPELIQAVDD 160 >gi|331083857|ref|ZP_08332966.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae bacterium 6_1_63FAA] gi|330403282|gb|EGG82842.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae bacterium 6_1_63FAA] Length = 446 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 16/114 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------G 151 LK+ C C +C ++ G+ + + + + Y+ + + E+I G Sbjct: 149 LKIAEGCDKRCTYCIIPKLRGNYR--SIPMEQLISQAEYLAGQ-GVRELILVAQETTVYG 205 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D I K L K+LK L I +Q +R P+ I PELIQ +KE K Sbjct: 206 KD--IYGKKCLHKLLKELCKIPGIQWIRI----LYCYPEEIYPELIQTMKEEKK 253 >gi|291557494|emb|CBL34611.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Eubacterium siraeum V10Sc8a] Length = 480 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 17/141 (12%) Query: 98 LLKLLHVCPVYCRFC-FRRE-------MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 L + CP C +C F ++G G +L D A + + ++ V Sbjct: 160 LYVSIPFCPSRCSYCSFISASGEGALKLIGDYFGLLLKELDIYADIVK-RFSLKVDTVYI 218 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208 GG P LS +L +++ L + +R + P I + ++ LK G + + Sbjct: 219 GGGTPTTLSASQLDRLIDKLGEFD-IANIREFT-AEAGRPDTITEDKLRALKNGGVRRIS 276 Query: 209 IAIHANHPYEFSEEAIAAISR 229 I P ++ + A+ R Sbjct: 277 IN-----PQSMNDSVLEAVGR 292 >gi|120554396|ref|YP_958747.1| radical SAM domain-containing protein [Marinobacter aquaeolei VT8] gi|120324245|gb|ABM18560.1| Radical SAM domain protein [Marinobacter aquaeolei VT8] Length = 298 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 41/170 (24%) Query: 97 ILLKLLHVCPVY-CRFC---------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 ++L + + C C FC FR D E A A + + Sbjct: 22 LILPVTNGCSWNQCTFCEMYTQPQKKFRARKPEDI------RADIEKAAAAFGD---VRR 72 Query: 147 VIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP---QRINPELIQCLKE 202 V GD ++L +RL +++ L R ++ + P + + E + L+E Sbjct: 73 VFLADGDAMVLPTRRLLEIIADLKRAFPGLERV-----SSYCLPRNLAKKSVEELAQLRE 127 Query: 203 AGKPVYIAIHANHPYEF--------SEE-AIAAISRLANAG----IILLS 239 AG + + E + E +A+ ++ AG +++L+ Sbjct: 128 AGLKILYVGMESGDDEVLRRVNKGETWESTRSALVKIREAGLVSSVMVLN 177 >gi|325847827|ref|ZP_08170049.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480845|gb|EGC83898.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 166 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 9/90 (10%) Query: 88 GIVHRYPD------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 G + +Y R + C C+ CF E + G + + K T+ ++Y+++ Sbjct: 4 GQIRKYDVANGPGIRTSFFVTG-CHANCKNCFNNEYMNPNFGNLWTEKQTQEVISYLKKD 62 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 ++ + GG+P S + L K++K +R Sbjct: 63 -EVEGLTILGGEPFE-STEDLIKIVKKIRE 90 >gi|167720586|ref|ZP_02403822.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei DM98] gi|167739576|ref|ZP_02412350.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 14] gi|167816780|ref|ZP_02448460.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 91] gi|167825186|ref|ZP_02456657.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 9] gi|167846683|ref|ZP_02472191.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei B7210] gi|167895272|ref|ZP_02482674.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 7894] gi|167911906|ref|ZP_02498997.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei 112] gi|167919900|ref|ZP_02506991.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei BCC215] gi|254191222|ref|ZP_04897726.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei Pasteur 52237] gi|254195839|ref|ZP_04902265.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei S13] gi|157938894|gb|EDO94564.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei Pasteur 52237] gi|169652584|gb|EDS85277.1| molybdenum cofactor biosynthesis protein A [Burkholderia pseudomallei S13] Length = 370 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + G +L+ ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99 Query: 154 PLILSHKRLQKVLKTLRYIKHV 175 PL+ K L+ +++ L + V Sbjct: 100 PLL--RKNLEFLIERLANMTTV 119 >gi|283782364|ref|YP_003373119.1| radical SAM domain-containing protein [Pirellula staleyi DSM 6068] gi|283440817|gb|ADB19259.1| Radical SAM domain protein [Pirellula staleyi DSM 6068] Length = 518 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 32/170 (18%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPLI 156 L+++ C + C C+ G + +V D + A+ + +V +GG+P I Sbjct: 102 LVEVTSSCNLTCPMCYASSAPGGKHTSV---DDCKLAIDRLVAVEGRADVCQLSGGEPTI 158 Query: 157 LSHKRLQKVLKTLRY--IKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 L+ ++ I +V I +RF S +P L++ +++ + + I Sbjct: 159 HP--ELETIVDYALAQPIDYVMINTNGIRFAS----------DPALVEFIRQRRERMEIY 206 Query: 211 IHANHPY-EFSEEAI---------AAISRLANAGIILLSQSVLLKGINDD 250 + E + + A+ L AGI + + L G+NDD Sbjct: 207 FQLDGLNDEIALKLRGEKLLERKIKALDALEAAGIHVTLVATLQAGVNDD 256 >gi|254446971|ref|ZP_05060438.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium HTCC5015] gi|198263110|gb|EDY87388.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium HTCC5015] Length = 329 Score = 42.4 bits (99), Expect = 0.10, Method: Composition-based stats. Identities = 16/92 (17%), Positives = 38/92 (41%), Gaps = 4/92 (4%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R + L + C + CR+C LS + + + + +V T Sbjct: 10 RKVTYVRLSVTDRCDLRCRYCMPEGFSDYHVPDHWLSVDEWLHLVGALAR-GGVQKVRIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 GG+PL+ + L ++++ + I+ ++ + + Sbjct: 69 GGEPLL--RRELPELIEGISQIEGIEDIALST 98 >gi|154497024|ref|ZP_02035720.1| hypothetical protein BACCAP_01317 [Bacteroides capillosus ATCC 29799] gi|150273423|gb|EDN00551.1| hypothetical protein BACCAP_01317 [Bacteroides capillosus ATCC 29799] Length = 493 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 48/252 (19%), Positives = 81/252 (32%), Gaps = 82/252 (32%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS---------SKDTEAALAYIQEKS 142 + + L + CP C +C V + G L ++ EAA ++ Sbjct: 166 KEDEISLYVGIPFCPTRCAYCS---FVSADVGKALKLLPPYLEALFREVEAAGDLLKRLG 222 Query: 143 -QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI--VDPQRINPELIQC 199 + V GG P LS ++L ++ +R H+ + R + + P I E + Sbjct: 223 LYVRTVYIGGGTPTTLSAEQLSALMGHIRT--HIDLSR-CTEYTVEAGRPDTITAEKLAA 279 Query: 200 LKEAG-KPVYIAIHANHPYEFSEEAIAAISR-------------LANAGIILLS------ 239 LKE G V + P S++ + A+ R + N+GI ++ Sbjct: 280 LKENGADRVSVN-----PQSMSDKVLRAMGRSHTAADILRAYELVRNSGIPCVNMDLIAG 334 Query: 240 --------------Q---------SV----LLKG------------INDDPEILANLMRT 260 Q +V L KG D ++L T Sbjct: 335 LPEDSREGFRSTLDQVLSMDPANITVHTLALKKGSRLMTEGGSLPTAEDVADMLDYAWTT 394 Query: 261 FVELRIKPYYLH 272 PYYL+ Sbjct: 395 LRGAGYVPYYLY 406 >gi|145301230|ref|YP_001144070.1| radical SAM domain-containing protein [Aeromonas salmonicida subsp. salmonicida A449] gi|142856007|gb|ABO92322.1| radical SAM domain protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 484 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 53/162 (32%), Gaps = 21/162 (12%) Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI----------LLKLLHVCPVYCR 110 +P EL + + G + L+ + +Y R + + C C Sbjct: 58 LPTDTELYQELKRKSFLAGSEDSYALRCLSAKYRQRKSFLSGGPGLHIFVITLRCGNSCE 117 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPLILSHKRLQKVLKTL 169 +C + +S + A+ + E I F GG+PL+ ++K + Sbjct: 118 YCQASRKSVTSSQHDMSQETARNAVDRVFESPNQRITIEFQGGEPLLAFD-----LIKFI 172 Query: 170 RYIKHVQILRFHSRVPIV----DPQRINPELIQCLKEAGKPV 207 H + H + + Q I E++ +K + Sbjct: 173 VDYAHEKN-SVHGKSLVFVIATSLQYITDEMLDFIKLHSIQI 213 >gi|295402407|ref|ZP_06812361.1| Radical SAM domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312112044|ref|YP_003990360.1| radical SAM protein [Geobacillus sp. Y4.1MC1] gi|294975570|gb|EFG51194.1| Radical SAM domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311217145|gb|ADP75749.1| Radical SAM domain protein [Geobacillus sp. Y4.1MC1] Length = 373 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 41/180 (22%), Positives = 67/180 (37%), Gaps = 24/180 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ +L C + C C R E + L+ ++ + + I E Q ++FTGGD Sbjct: 8 PFIVIWELTRACQLKCLHC-RAEAQYHRDPRELTFEEGKRLIDDIYEMEQPL-LVFTGGD 65 Query: 154 PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 PL+ L K I + LR S P P + E I+ KE G + A Sbjct: 66 PLMRPDVFELAKY-----AID--KGLRV-SMTPSATPN-VTKEAIRKAKEIGLSRW-AFS 115 Query: 213 ANHPY-EFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 + P E + AI L I + +V+ + + +A L+ Sbjct: 116 LDGPNAEIHDRFRGMPGSFDLTIKAIEYLHELDIPVQINTVISRYNVHALDEMAKLVEKL 175 >gi|148657495|ref|YP_001277700.1| radical SAM domain-containing protein [Roseiflexus sp. RS-1] gi|148569605|gb|ABQ91750.1| Radical SAM domain protein [Roseiflexus sp. RS-1] Length = 800 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 11/126 (8%) Query: 90 VHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 +H PDR++ + + + C + C C+ G ++ + D + + Sbjct: 444 LHTPPDRLVNAYIHITYACNLTCAHCY--AEAGPRRREAMPVGDVLRLAEE-AARLGFQK 500 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 V+ TGG+PL+ + +L+ L + ++ R R + P + P+LI L A Sbjct: 501 VVITGGEPLMHPQR--DALLEGLAALRPLLRPTRLALRTNLAYP--LTPKLIAALVHAAD 556 Query: 206 PVYIAI 211 V +++ Sbjct: 557 QVIVSL 562 >gi|255658518|ref|ZP_05403927.1| radical SAM domain protein [Mitsuokella multacida DSM 20544] gi|260849318|gb|EEX69325.1| radical SAM domain protein [Mitsuokella multacida DSM 20544] Length = 332 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 14/105 (13%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH- 159 + C +YC C+R G + L++++ + L+ I + + +IF+GG+PL+ Sbjct: 8 TTNACNMYCAHCYRDA--GCRAEEELNTEEGKKLLSEIAK-AGFKIMIFSGGEPLMRPDI 64 Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 L K L I V F + + I ++ + LKEAG Sbjct: 65 LELVKYASDLHMIP-V----FGTNGTL-----ITLDMAKKLKEAG 99 >gi|15674141|ref|NP_268316.1| hypothetical protein L19128 [Lactococcus lactis subsp. lactis Il1403] gi|12725219|gb|AAK06257.1|AE006444_8 unknown protein [Lactococcus lactis subsp. lactis Il1403] Length = 707 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 70/184 (38%), Gaps = 28/184 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C+FC+ + +G L + L I + + +V GG+P Sbjct: 13 WMLTNKCNLRCKFCY----LEDYQGKELELDEINQVLD-IIQDKEFTQVSLLGGEP--TE 65 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHANHP 216 + + ++ L LR S + Q++ N ELI+ L ++ + I P Sbjct: 66 CEYFEYIIIQLEK------LRI-SYSFSTNGQKLFRNEELIRILSKSKYLKEVQISLESP 118 Query: 217 YEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF--VEL 264 + +A+ +++ L + V+ K N + + ++ T EL Sbjct: 119 QKLINDAVRGKGTFESAIKSVALLVKENVPTRLAMVVTKENNSTIQQMIDMCATLGCREL 178 Query: 265 RIKP 268 R+ P Sbjct: 179 RLMP 182 >gi|330994803|ref|ZP_08318725.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp. SXCC-1] gi|329758064|gb|EGG74586.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp. SXCC-1] Length = 339 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 21/166 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C +M K +LS + E A + + TGG+PL+ Sbjct: 19 VSVTDRCDMRCIYCMAEDMTFLPKAEILSLTELERLCAAFIRH-GVRRLRITGGEPLVRR 77 Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212 + + + L + L + R+ + L+ G + + +++ Sbjct: 78 DVMAFFREMGQWLGRPGGQPGLDELTLTTNA-----SRL-AAFAEDLRACGVRRINVSLD 131 Query: 213 ANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGINDD 250 + P F+ I AG+ L +V + G+NDD Sbjct: 132 SLDPARFARITRRGNLSRTLDGIRAAREAGLALRINTVAMAGVNDD 177 >gi|291563253|emb|CBL42069.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [butyrate-producing bacterium SS3/4] Length = 476 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 59/130 (45%), Gaps = 15/130 (11%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 I +YP + + ++ C +C +C + G ++ +D + + + EV+ Sbjct: 178 IERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--EDIIKEIEGLVAD-GVVEVM 234 Query: 149 FTGGDPLILSHKRLQ------KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 G + + K L+ ++L+ + I+ ++ +RF + P+ ++ ELI+ +K Sbjct: 235 LLGQN-VNSYGKNLEQPITFAELLRRVEKIEGLERIRFMTSH----PKDLSDELIETMKN 289 Query: 203 AGKPVYIAIH 212 + K + +H Sbjct: 290 S-KKICSHLH 298 >gi|167563554|ref|ZP_02356470.1| molybdenum cofactor biosynthesis protein A [Burkholderia oklahomensis EO147] Length = 370 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 30/189 (15%), Positives = 62/189 (32%), Gaps = 31/189 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + G +L+ ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99 Query: 154 PLILSHKRLQKVLKTLRYIKHV----QILRFHSR-VPIVDPQ---------RINPELIQC 199 PL+ K ++ +++ L + V + + +V R+ L Sbjct: 100 PLL--RKNIEFLIERLARMTTVAGRPLDITLTTNGSLLVRKAKSLRDAGLSRVTVSLDAL 157 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLM 258 K + N S + + I AG + V+ +G ND + + Sbjct: 158 DDALFKRM------NDADFASADVLDGIFAAQAAGLAPVKVNMVVKRGTNDC--EIVPMA 209 Query: 259 RTFVELRIK 267 R F + Sbjct: 210 RRFKGTGVV 218 >gi|148243988|ref|YP_001220226.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Acidiphilium cryptum JF-5] gi|146400551|gb|ABQ29084.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Acidiphilium cryptum JF-5] Length = 235 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 63/164 (38%), Gaps = 37/164 (22%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGGDPLILSHKR 161 CP+ CR+C V Q S AL ++ ++ + + V+F+GG+P + + Sbjct: 31 RGCPLRCRYC---HNVDLQARRGTSPLRWLEALTWLDQRRGLLDSVVFSGGEPTM--DRC 85 Query: 162 LQKVLKTLRY--------------------IKHVQILRFHSRVPIVDPQRINPE------ 195 L+++++ +R + +Q + + P D RI Sbjct: 86 LEQMIRDVRSLGFEVALHTAGVSPKRLERVLPMLQWVGLDIKAPFGDYARITGSEASGAR 145 Query: 196 ---LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS-RLANAGI 235 + L+E+G P + HP + + ++ L +GI Sbjct: 146 ARVALAMLRESGVPYEVRTTV-HPALLDAQVLQTLALDLRASGI 188 >gi|325971811|ref|YP_004248002.1| MiaB-like tRNA modifying enzyme [Spirochaeta sp. Buddy] gi|324027049|gb|ADY13808.1| MiaB-like tRNA modifying enzyme [Spirochaeta sp. Buddy] Length = 437 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 18/126 (14%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y R LK+ C C +C R + + ++ + + E ALA E S E++ TG Sbjct: 142 YHSRAYLKIQDGCDNSCAYC-RVHIARGKAVSLQTEQVIERALA--LEASGFQEIMLTGV 198 Query: 153 DPLILSHKR-------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + L + + L+K+L L +R R+ ++P I+ L+ L + Sbjct: 199 N-LTMYDHQGEGLGGLLEKLLAKLSS-----SVRI--RLSSMEPDHIDDRLLDVLTDRRM 250 Query: 206 PVYIAI 211 + I Sbjct: 251 QPHFHI 256 >gi|322434558|ref|YP_004216770.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9] gi|321162285|gb|ADW67990.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9] Length = 359 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 35/214 (16%), Positives = 59/214 (27%), Gaps = 64/214 (29%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + C CR+C+ R + + Y +++E LI Sbjct: 65 INPYRGCEFGCRYCYARY----THEFLAAKNRPADTPDY--RDPELFER-------LIFL 111 Query: 159 HKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQ-------RINPELIQCLKEA------- 203 + +L+ LR I + + + DP RI L++ Sbjct: 112 KENAAWLLEQELRKIDPAEEIALGT---ATDPYQPIERTARITRSLLEVFARKSGYRLGI 168 Query: 204 -------------------GKPVYIAIHANHP-----YEFSEEA------IAAISRLANA 233 + + P A AA+ L A Sbjct: 169 ISKSQLILRDIDLLSEISKRNTLVLHTTITTPDAKLARVLEPRAPRPDLRFAAVKALREA 228 Query: 234 GIIL--LSQSVLLKGINDDPEILANLMRTFVELR 265 G+ + L S LL GI D+ + L + R E Sbjct: 229 GLTVGILC-SPLLPGITDNEKALDAMARRAAEAG 261 >gi|296446184|ref|ZP_06888132.1| MiaB-like tRNA modifying enzyme [Methylosinus trichosporium OB3b] gi|296256378|gb|EFH03457.1| MiaB-like tRNA modifying enzyme [Methylosinus trichosporium OB3b] Length = 400 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 31/148 (20%), Positives = 46/148 (31%), Gaps = 25/148 (16%) Query: 57 ARQFI-------PQKEELNILPEEREDP------------IGDNNHSPLKGIVHRYPDRI 97 ARQ I P E + R DP +G+ +PL R Sbjct: 48 ARQAIRRLHRERPSAEIVVAGCAARIDPASFATMAGVTRVLGEAQDAPLARSASEGQTRA 107 Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--PL 155 L + + C C FC G + D A + + E++ TG D Sbjct: 108 FLAVQNGCDHRCSFCVIP--FGRGPSRSAAPADVIAEARRLVAVGR-REIVLTGVDLTSY 164 Query: 156 ILSHKRLQKVLKT-LRYIKHVQILRFHS 182 L + + LR ++ LR S Sbjct: 165 RHEDVTLGALAREILRATPQLERLRLSS 192 >gi|260587855|ref|ZP_05853768.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583] gi|260542120|gb|EEX22689.1| RNA modification enzyme, MiaB family [Blautia hansenii DSM 20583] Length = 446 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 16/114 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------G 151 LK+ C C +C ++ G+ + + + + Y+ + + E+I G Sbjct: 149 LKIAEGCDKRCTYCIIPKLRGNYR--SIPMEQLISQAEYLAGQ-GVRELILVAQETTVYG 205 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D I K L K+LK L I +Q +R P+ I PELIQ +KE K Sbjct: 206 KD--IYGKKCLHKLLKELCKIPGIQWIRI----LYCYPEEIYPELIQTMKEEKK 253 >gi|87198947|ref|YP_496204.1| GTP cyclohydrolase subunit MoaA [Novosphingobium aromaticivorans DSM 12444] gi|87134628|gb|ABD25370.1| GTP cyclohydrolase subunit MoaA [Novosphingobium aromaticivorans DSM 12444] Length = 339 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 61/170 (35%), Gaps = 34/170 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-LAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C M K VLS ++ L +I + ++ TGG+PL+ Sbjct: 25 LSVTDRCDLRCAYCMPERMEFLPKAEVLSLEELHRLSLHFIAR--GVRKIRLTGGEPLVR 82 Query: 158 SH--KRLQKVLKTLRY-IKHVQILRFHSRV--------------PIVDPQRINPELIQCL 200 ++ + + L + + + +R+ V ++ E L Sbjct: 83 RDMVDLVRALGRKLGDGLDELTMTTNGTRLAEFAGDLAAAGLRRINVSLDTLDREAFARL 142 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + + I+ AG+ + +V LKGIN+D Sbjct: 143 SR--------------RDVLPQVLEGIAAAREAGLRVKINAVALKGINED 178 >gi|319787616|ref|YP_004147091.1| molybdenum cofactor biosynthesis protein A [Pseudoxanthomonas suwonensis 11-1] gi|317466128|gb|ADV27860.1| molybdenum cofactor biosynthesis protein A [Pseudoxanthomonas suwonensis 11-1] Length = 339 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 7/84 (8%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDP 154 L ++ C C +C + V GT +S+ E + + + ++ TGG+P Sbjct: 24 LSVIDACNFRCGYCMPADRVPDDHGTSAASRMSFDQIETLVRGFVQ-VGVRKLRLTGGEP 82 Query: 155 LILSHKRLQKVLKTLRYIKHVQIL 178 L+ + L +++ L I ++ L Sbjct: 83 LL--RRNLPELIARLARIPGIEDL 104 >gi|26250136|ref|NP_756176.1| coproporphyrinogen III oxidase [Escherichia coli CFT073] gi|26110565|gb|AAN82750.1|AE016768_168 Putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli CFT073] Length = 445 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|20089140|ref|NP_615215.1| hypothetical protein MA0242 [Methanosarcina acetivorans C2A] gi|19914008|gb|AAM03695.1| conserved hypothetical protein [Methanosarcina acetivorans C2A] Length = 373 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 11/113 (9%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQK-----GTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R +++ CP CR+C + G + +VL + L +I Sbjct: 142 RAPIEISRGCPWGCRYCQTPRLFGREVRHRSIDSVLKNARYYDDLRFIASN-----AFAY 196 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + +++K+L L + +I F + V P+ + E ++ +++ Sbjct: 197 GSDGIHPRFDKVEKLLSALHELPDKKIF-FGTFPSEVRPEFVTEESVELVRKY 248 >gi|253681883|ref|ZP_04862680.1| conserved hypothetical protein [Clostridium botulinum D str. 1873] gi|253561595|gb|EES91047.1| conserved hypothetical protein [Clostridium botulinum D str. 1873] Length = 444 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 35/176 (19%), Positives = 69/176 (39%), Gaps = 39/176 (22%) Query: 57 ARQFIPQKEELNILPEER--EDPIGDNNHSPLKGIVHRYPD-------RIL--------L 99 +Q IP+ + + + + +D I + + K +Y D RIL + Sbjct: 90 LQQLIPEIDIMLGVNDYANIQDYIDEFFENKNKICKCKYSDVSINEGKRILTTDKHVAYI 149 Query: 100 KLLHVCPVYCRFCFRREMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTGGDP 154 ++ C +C +C ++ G + + S K+ A + E+I G D Sbjct: 150 RISEGCDNFCTYCIIPKIRGKYRSRSIDSIVKEAKELSAM--------GVKELILVGQDT 201 Query: 155 LIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 I S +L +++ + I+ ++ +R V P+ I ELI+ +K K Sbjct: 202 AIYGRDIYSENKLPDLIRAISEIESIEWIR----VLYTYPEEITDELIEEIKNNDK 253 >gi|167772323|ref|ZP_02444376.1| hypothetical protein ANACOL_03700 [Anaerotruncus colihominis DSM 17241] gi|167665426|gb|EDS09556.1| hypothetical protein ANACOL_03700 [Anaerotruncus colihominis DSM 17241] Length = 434 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 56/164 (34%), Gaps = 36/164 (21%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 + L+ H C C FCF +M + ++ Y ++ +F G+ Sbjct: 76 ETYLMDRQHTCKNKCVFCFVDQMPPGMRDSL-----------YFKDDDSRMSFLF--GNY 122 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 + L++ + I + +R P+ ++ + HA Sbjct: 123 ITLTN-----LTDA--DIDRIIKMRI---SPVNISVHTTDPALRV------QLMKNPHA- 165 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 ++ I RL AGI + +Q VL G+ND + L Sbjct: 166 ------AGSLRYIGRLTGAGIRVNAQLVLCPGLNDGAALERTLC 203 >gi|313682137|ref|YP_004059875.1| miab-like tRNA modifying enzyme [Sulfuricurvum kujiense DSM 16994] gi|313154997|gb|ADR33675.1| MiaB-like tRNA modifying enzyme [Sulfuricurvum kujiense DSM 16994] Length = 415 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 48/125 (38%), Gaps = 10/125 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C V ++ +K E + + E + TG + Sbjct: 132 KSRAFIKIQEGCNFRCSYCII-PFVRGDARSMDEAKILEQ-IQRLASN-GFGEFVLTGTN 188 Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + + +++K + I+ V+ +R S ++P +IN + L E ++ Sbjct: 189 VGSYGQGEGRNIAELMKKMSLIRGVRRIRVGS----LEPIQINESFREILSEPWLERHLH 244 Query: 211 IHANH 215 I H Sbjct: 245 IAIQH 249 >gi|94499363|ref|ZP_01305901.1| Molybdenum cofactor biosynthesis enzyme [Oceanobacter sp. RED65] gi|94428995|gb|EAT13967.1| Molybdenum cofactor biosynthesis enzyme [Oceanobacter sp. RED65] Length = 330 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 39/180 (21%), Positives = 70/180 (38%), Gaps = 21/180 (11%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + + C C +C +M + VLS + E E + + TGG+PLI Sbjct: 15 VRISVTDRCDFRCVYCMAEDMTFIPRKDVLSFEQIELISQAFVE-LGVTSIRLTGGEPLI 73 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANH 215 K + ++ L + + + + PQ L LK+AG + I++ + Sbjct: 74 --RKNIVDLVAKLNQLDGLNEITMTTNG-SQLPQ-----LAHGLKQAGLSRLNISLDSLK 125 Query: 216 PYEFSEEAIA--------AISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRI 266 P F E I AG + +V+L+G NDD + +L++ + I Sbjct: 126 PERFKELTRTGDLQNVLVGIEAAKQAGFDRIKLNAVILRGRNDD--EILDLVKFVRDQGI 183 >gi|303237126|ref|ZP_07323696.1| MiaB-like protein [Prevotella disiens FB035-09AN] gi|302482513|gb|EFL45538.1| MiaB-like protein [Prevotella disiens FB035-09AN] Length = 452 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C +C G + + S + E A K E++ TG Sbjct: 159 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTIQSLVEQAEQA-----AKEGGKEIVLTG 213 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GD + + ++K L ++ ++ R S ++P I+ ELI+ + Sbjct: 214 VNIGDFGRTTSESFLDLVKALDQVEGIERFRISS----LEPDLIDDELIRYCATSR---A 266 Query: 209 IAIHA 213 H Sbjct: 267 FMPHF 271 >gi|291519359|emb|CBK74580.1| SSU ribosomal protein S12P methylthiotransferase [Butyrivibrio fibrisolvens 16/4] Length = 442 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 14/113 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIFTGG 152 LK+ C C +C + G + + ++ + + +I E G Sbjct: 149 LKIAEGCNKRCTYCIIPYIRGDYR--SVPMEEILSEAKQLVADGVKEIILVAQETTVYGM 206 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D I + K L ++L L I ++ +R P+ I ELI+C+ K Sbjct: 207 D--IYNKKSLPELLNKLCEIDGLEWIRI----LYAYPEEITDELIECMASQPK 253 >gi|237732747|ref|ZP_04563228.1| radical SAM-superfamily protein [Mollicutes bacterium D7] gi|229384170|gb|EEO34261.1| radical SAM-superfamily protein [Coprobacillus sp. D7] Length = 402 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 65/164 (39%), Gaps = 34/164 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C +C C + + S+ + + +A + ++ + + FTGG+PL+ Sbjct: 102 IAVTDKCMYHCWHCSASKFMKDATSNSQFSTLELKKIIAQL-QRLGVAIIGFTGGEPLLR 160 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGK-PVYIAI-- 211 L++++ ++ R ++ + LKEAG + I++ Sbjct: 161 ED--LEELIASIDE-----------RSVSYIFTTGYKLTYQRALALKEAGLFGIAISLDS 207 Query: 212 ----------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 H +H Y + A+ AI AG+ +SQ+V + Sbjct: 208 LDAQRHNGMRHNDHAY---DYAVEAIKNAKKAGLYTMSQTVCTR 248 >gi|168704786|ref|ZP_02737063.1| hypothetical protein GobsU_34937 [Gemmata obscuriglobus UQM 2246] Length = 467 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 12/114 (10%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 LK+ C C +C +M G K ++ + + E+I D Sbjct: 169 AYLKVSEGCDRLCTYCAIPKMRG--KHVTKPIEEVIREARELAAD-GVRELIIVAQDTTY 225 Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 RL ++L+ L +++++ +R P+ I+ ELI+ + K Sbjct: 226 YGMDLYGRTRLAELLRELDKVENIEWIR----TLYAYPEHISDELIETFAGSKK 275 >gi|167756317|ref|ZP_02428444.1| hypothetical protein CLORAM_01850 [Clostridium ramosum DSM 1402] gi|167703725|gb|EDS18304.1| hypothetical protein CLORAM_01850 [Clostridium ramosum DSM 1402] Length = 366 Score = 42.4 bits (99), Expect = 0.11, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 65/164 (39%), Gaps = 34/164 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C +C C + + S+ + + +A + ++ + + FTGG+PL+ Sbjct: 66 IAVTDKCMYHCWHCSASKFMKDATSNSQFSTLELKKIIAQL-QRLGVAIIGFTGGEPLLR 124 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGK-PVYIAI-- 211 L++++ ++ R ++ + LKEAG + I++ Sbjct: 125 ED--LEELIASIDE-----------RSVSYIFTTGYKLTYQRALALKEAGLFGIAISLDS 171 Query: 212 ----------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLK 245 H +H Y + A+ AI AG+ +SQ+V + Sbjct: 172 LDAQRHNGMRHNDHAY---DYAVEAIKNAKKAGLYTMSQTVCTR 212 >gi|301059325|ref|ZP_07200252.1| radical SAM domain protein [delta proteobacterium NaphS2] gi|300446554|gb|EFK10392.1| radical SAM domain protein [delta proteobacterium NaphS2] Length = 375 Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 33/187 (17%), Positives = 71/187 (37%), Gaps = 25/187 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 P + L + + C + CR C S +V S T+ I++ + + E+ TG Sbjct: 21 PKILTLMVTNGCNLACRHC--WPQSVSGTESVASPVSTKTLKEIIRQWSRLDLEEICLTG 78 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+PL ++L+ V+ + + ++ P+ + E + + + V +++ Sbjct: 79 GEPLTHP--HWLEILRFACEQTEVKRVCLQTNATLLKPE--DCEELAGIGKREILVQVSL 134 Query: 212 HANHPYEFS--------EEAIAAISRLANAGIILLSQSVL----LKGINDDPEILANLMR 259 N E A+ + RL AG L ++V+ + + + LM Sbjct: 135 EGNTEAEHDLVRGKGNFLAAVRGMERLVQAG--LGKRTVVALTETRH---NFPSIPRLME 189 Query: 260 TFVELRI 266 + + Sbjct: 190 RLSSMGV 196 >gi|266624276|ref|ZP_06117211.1| Fe-S oxidoreductase [Clostridium hathewayi DSM 13479] gi|288863884|gb|EFC96182.1| Fe-S oxidoreductase [Clostridium hathewayi DSM 13479] Length = 295 Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 22/75 (29%), Positives = 33/75 (44%), Gaps = 7/75 (9%) Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 +H F+ +A+ I L AG+ + Q VL KG+ND E+ + R + PY Sbjct: 2 MLH----NRFAGQALKRIDELYKAGVPMNGQIVLCKGLNDGVELERTI-RDLSK--YLPY 54 Query: 270 YLHHPDLAAGTSHFR 284 + G S FR Sbjct: 55 MESVSVVPVGLSKFR 69 >gi|325270230|ref|ZP_08136837.1| Fe-S oxidoreductase [Prevotella multiformis DSM 16608] gi|324987531|gb|EGC19507.1| Fe-S oxidoreductase [Prevotella multiformis DSM 16608] Length = 450 Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 46/125 (36%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C +C G + ++S E A + E++ TG Sbjct: 157 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPTIASLVSQAEEA-----AREGGKEIVLTG 211 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GD + + ++K L ++ ++ R S ++P I+ +LI + Sbjct: 212 VNIGDFGETTGESFLDLVKALDRVEGIRRFRISS----LEPDLIDDDLIAYCARSR---A 264 Query: 209 IAIHA 213 H Sbjct: 265 FMPHF 269 >gi|261855784|ref|YP_003263067.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halothiobacillus neapolitanus c2] gi|261836253|gb|ACX96020.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halothiobacillus neapolitanus c2] Length = 482 Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 26/149 (17%), Positives = 53/149 (35%), Gaps = 20/149 (13%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154 + ++ C YC FC G + D A +A + E+ + EV G + Sbjct: 172 TAFVSIMEGCSKYCSFCVVPYTRGEEISRPF--DDVIAEVAELAEQ-GVREVNLLGQNVN 228 Query: 155 ---LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 ++ + L +++ + I + +RF + P+ LI+ + K + Sbjct: 229 AYRGVMHDGQIADLALLIEYIARIDSIGRIRFTTSHPV----EFTDRLIEAYRNVPK-LA 283 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIIL 237 +H P + + I L G + Sbjct: 284 AYLHL--PVQVGSD---RILALMKRGHTV 307 >gi|153853286|ref|ZP_01994695.1| hypothetical protein DORLON_00681 [Dorea longicatena DSM 13814] gi|149754072|gb|EDM64003.1| hypothetical protein DORLON_00681 [Dorea longicatena DSM 13814] Length = 440 Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 33/136 (24%), Positives = 51/136 (37%), Gaps = 21/136 (15%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 P+ + G + Y LK+ C +C +C V +V + + A Sbjct: 131 PLPETKRLVTTGGHYAY-----LKIAEGCDKHCTYCII-PKVRGNYRSVPMERLIKEAQE 184 Query: 137 YIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 + E+I G D I K L K+LK L IK ++ +R P Sbjct: 185 --LADQGVKELILVAQETTVYGQD--IYGEKSLHKLLKELCQIKGIRWIRL----LYCYP 236 Query: 190 QRINPELIQCLKEAGK 205 + I+ LIQ +KE K Sbjct: 237 EEIDDNLIQVMKEEPK 252 >gi|54301718|ref|YP_131711.1| hypothetical protein PBPRB0038 [Photobacterium profundum SS9] gi|46915138|emb|CAG21911.1| conserved hypothetical protein [Photobacterium profundum SS9] Length = 295 Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 57/165 (34%), Gaps = 31/165 (18%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSK--DTEAALAYI-QEKSQIWEVIFTGG 152 ++L++ + C C FC +M K D E L I +++ V G Sbjct: 19 LILQVTNGCSHNQCTFC---DMYTQPHKKFRPKKPDDIERELQQIVASGTRVHRVFLADG 75 Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILRFHS----RVPIVDPQRINPELIQCLKEAGKPV 207 D + L RLQ + + + VQ R S R E + L++ G + Sbjct: 76 DAMTLPFARLQHICSLINQYLPDVQ--RISSYCLPRNLTNK----TEEQLAELRQLGLSL 129 Query: 208 YIAIHANHPYEFSEEAIA---------AISRLANAG----IILLS 239 + E + A+ +L AG +++L+ Sbjct: 130 LYVGCESGDDEVLAKVQKGETFESSLIALKKLKAAGMKSSVMILN 174 >gi|15669680|ref|NP_248493.1| hypothetical protein MJ_1487 [Methanocaldococcus jannaschii DSM 2661] gi|38258708|sp|Q58882|Y1487_METJA RecName: Full=Uncharacterized methyltransferase MJ1487 gi|1592124|gb|AAB99497.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM 2661] Length = 426 Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 39/240 (16%), Positives = 88/240 (36%), Gaps = 53/240 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPL- 155 +++ CP C FC + G + +D E Y I + + ++ F + Sbjct: 177 IEITRGCPYKCYFCQTPRIFG----KKIRHRDVENIYKYVEIMAERNLKDIRFITPNAFG 232 Query: 156 -------ILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEA--GK 205 L+ +++K+L+++R I + + F + V P+ +N E + + K Sbjct: 233 YGSKDGKTLNIDKIEKLLESIREILGNNGRIFFGTFPSEVRPEHVNIETVDLILRYADNK 292 Query: 206 PVYIAI-----------HANHPYEFSEEAIAAISRLANAGIILLSQSV-LLKGI----ND 249 + I H H E + A+ AG+ + V + G+ + Sbjct: 293 NLVIGAQSGSEKVLELCHRGHTVE---DVYNAVRVARKAGLGVD---VDFIFGLPGETEE 346 Query: 250 DPEILANLMRTFVELRIKPY-YLHHPDLAAGTSHFRLTIEEG------QKIVASLKEKIS 302 D E +M+ +++ K + + P + + +KI+ +++ +I Sbjct: 347 DVEKTIKVMKDLIKMGAKIHAHTFMPLP-------QTPFAKANPGKVDKKIIRAMRYEIP 399 >gi|67527057|gb|AAY68326.1| putative molybdenum cofactor biosynthesis enzyme [uncultured marine bacterium 66A03] Length = 334 Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 34/193 (17%), Positives = 64/193 (33%), Gaps = 46/193 (23%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 D + + + C C +C +M K +L+ ++ E ++ TGG+P Sbjct: 15 DYVRISVTDRCDFRCVYCMSEQMTFLPKKDLLTLEEIAIVCDSFIELGT-KKIRLTGGEP 73 Query: 155 LILSHKRLQKVLKTLRYIKHVQI-----LRFHS-----------------RVPIVDPQRI 192 L+ + + ++K L HV+ + + R V + Sbjct: 74 LV--RRNIMHLIKHLGT--HVKKGKLEEITITTNGSQLQKFSDLLLEAGVRRINVSIDTL 129 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 +PE + + GK + + + AG+ + +V LKGINDD Sbjct: 130 DPEKFERITRWGK--------------LDVVLNGLDAAKKAGLKIKLNTVALKGINDD-- 173 Query: 253 ILANLMRTFVELR 265 L Sbjct: 174 ---ELSTMLNWAG 183 >gi|78358583|ref|YP_390032.1| Elongator protein 3/MiaB/NifB [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78220988|gb|ABB40337.1| Elongator protein 3/MiaB/NifB [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 464 Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 48/240 (20%), Positives = 82/240 (34%), Gaps = 44/240 (18%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 +L ++ C ++CRFCF G + + ++ V +GG+P Sbjct: 94 TLLFEITSRCNLHCRFCFASA--GKSAPPDPDMAALRTLMDNARPRTGPCNVQLSGGEP- 150 Query: 156 ILSHKRLQKVLKTL-RYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEA-GKPVYI 209 + L +++ VQ+ LR R P + Q L + G I Sbjct: 151 TMRDD-LPQIIGMAKERFPFVQLNTNGLRIA-REPSLAAQLARAGLDSVFLQFDGTQDAI 208 Query: 210 AIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD-PEILANLMRTFVEL--R 265 A E + A+ L+ AGI I+L +V+ G+NDD + L Sbjct: 209 YT-ALRGMPLLREKMEAVRLLSEAGIGIVLVPTVV-PGVNDDNIGEILRLGAALCPAVRG 266 Query: 266 IKPYYLHHPDLAAGTSHF-RLTIEEGQ-----------------KIVASLKEKISGLCQP 307 + P SHF R +G +I+ L+++ +GL Sbjct: 267 VH----FQP-----VSHFGRHPAPDGATRAPEQGPPPAERITLPEIMRGLEKQTAGLVTT 317 >gi|261855208|ref|YP_003262491.1| molybdenum cofactor biosynthesis protein A [Halothiobacillus neapolitanus c2] gi|261835677|gb|ACX95444.1| molybdenum cofactor biosynthesis protein A [Halothiobacillus neapolitanus c2] Length = 328 Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 68/175 (38%), Gaps = 32/175 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C + L++ + E L + E + V TGG+PL+ Sbjct: 17 LSVTDRCDLRCFYCMPEGFNDFEVPEHWLTADEIERLLGVMAEM-GLRRVRITGGEPLV- 74 Query: 158 SHKRLQKVLKTLRYIKHVQILRF---HSRV-PIVDP------QRINPELIQCLKEAGKPV 207 + ++ +++ + + ++ + +R+ + P RIN L + K Sbjct: 75 -RRGIEDIVRRIDALPGIRDIALSTNATRLGKMAAPLKAAGVDRINVSLDTLDADRFKQ- 132 Query: 208 YIAIHANHPYEFSE----EAIAAISRLANAGI-ILLSQSVLLKGIN-DDPEILAN 256 ++ + I + +AG+ + V++KG+N DD E + Sbjct: 133 -----------ITQGKLSKVIDGLMAAKDAGLSPIKLNMVVMKGVNEDDVESVLE 176 >gi|225572114|ref|ZP_03780978.1| hypothetical protein RUMHYD_00408 [Blautia hydrogenotrophica DSM 10507] gi|225040448|gb|EEG50694.1| hypothetical protein RUMHYD_00408 [Blautia hydrogenotrophica DSM 10507] Length = 488 Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 28/157 (17%), Positives = 67/157 (42%), Gaps = 24/157 (15%) Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 + + I E D I + P +YP + + ++ C +C +C + G ++ Sbjct: 171 SDRMIIDIWEGTDQIVE--DLPTD---RKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERS 225 Query: 124 TVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHV 175 + ++ E +A + EV+ G + + K L + +L+ + ++ + Sbjct: 226 REPKAIIREIEKLVA-----DGVREVMLLGQN-VNSYGKTLDEPVSFARLLEEVEQVEGL 279 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 + +RF + P+ ++ ELIQ + ++ K + +H Sbjct: 280 ERIRFMTSH----PKDLSDELIQVMAKSQK-ICRHLH 311 >gi|91773247|ref|YP_565939.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM 6242] gi|91712262|gb|ABE52189.1| FeMo cofactor biosynthesis protein nifB [Methanococcoides burtonii DSM 6242] Length = 312 Score = 42.4 bits (99), Expect = 0.12, Method: Composition-based stats. Identities = 39/212 (18%), Positives = 72/212 (33%), Gaps = 35/212 (16%) Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRR------EMVGSQKGTVLSSKDTEAALAYIQE 140 K H++ RI L + C + C +C R+ G + + E +++ Sbjct: 33 KNAQHKF-GRIHLAVAPKCNIQCNYCDRKFDCVNESRPGVTSEILTPQEALEKTRQVLKD 91 Query: 141 KSQIWEVIFTG-GDPLIL--SHKRLQKVLKTLRYI-------------KHVQILRFHSRV 184 I V G GDPL + + L+ + + K ++LR Sbjct: 92 HPFIKVVAVAGPGDPLANDETFETLELIKNEFPDVTLCLSTNGLALPDKMDELLRVGVST 151 Query: 185 PIV-----DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 V DP +I +++ + GK + I + AG+++ Sbjct: 152 LTVTLNAIDP-KIQAQIVDHISYKGKSY---TGVEAAEILIANQLEGIKKAVEAGMVIKV 207 Query: 240 QSVLLKGINDD--PEILANLMR-TFVELRIKP 268 +VL+ IN D E+ + + I P Sbjct: 208 NTVLIPEINKDHIVEVAKKIREMGVFIMNIMP 239 >gi|262277765|ref|ZP_06055558.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium HIMB114] gi|262224868|gb|EEY75327.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium HIMB114] Length = 435 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 13/111 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD--P 154 + + C +C+FC V S+D L I + E++ G + Sbjct: 153 VTIQEGCDKFCKFC-----VVPYTRGPEFSRDHNKILDEILSLTDNGTKEIVLLGQNVSA 207 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + L +++K + I +V+ +RF + P + ELI E K Sbjct: 208 YKNNDISLARLIKKIAKINNVKRIRFTTSHPND----FDQELISLFGEEPK 254 >gi|258406363|ref|YP_003199105.1| ribosomal RNA large subunit methyltransferase N [Desulfohalobium retbaense DSM 5692] gi|257798590|gb|ACV69527.1| radical SAM enzyme, Cfr family [Desulfohalobium retbaense DSM 5692] Length = 359 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 54/298 (18%), Positives = 98/298 (32%), Gaps = 78/298 (26%) Query: 11 AQDLYNANLIK-KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNI 69 A+ ++ IK +++ +S AL+ V PIA +P E++ Sbjct: 28 AEQIWQWLWIKGATSFEDMTNVSKSLRSALSQVF-----------PIA---LPTVAEVHT 73 Query: 70 LPEEREDPIGDNNHSPL------KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 + + + + + G H L C + C FC Q G Sbjct: 74 SADGTRKFLLNLHDGHVLETVLIPGGEHF---TQCLSTQVGCNLGCTFCS-----TGQMG 125 Query: 124 TVLSSKDTEAALAYIQEKSQIWE----------VIFTGGDPLILSHKRLQKVLKTLRYIK 173 + E A I ++ +W+ V G+PL L+ + + L L Sbjct: 126 LTRNLSAAEIAGQVIVARNHLWQTGTGMRLRNLVFMGMGEPL-LNWENVDNALDRL---- 180 Query: 174 HVQILRFHSRVPIVDPQRIN------PELIQCLKEAGK-PVYIAIHANHPYE-----FSE 221 H+ P+R+ P + L + K + +++HA P + Sbjct: 181 ------IHASAMNFSPRRVTVSTVGVPGTLDALGHSHKASLAVSLHA--PNQELREKIMP 232 Query: 222 EAIAAI------SRLA------NAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 A + +RL + + VLL G+ND + L+R +R K Sbjct: 233 RAARMLPLPDLLARLRSYPMAPRQRVTIE--YVLLGGVNDSLDQARQLVRCLNGIRCK 288 >gi|170290655|ref|YP_001737471.1| molybdenum cofactor biosynthesis protein A [Candidatus Korarchaeum cryptofilum OPF8] gi|170174735|gb|ACB07788.1| molybdenum cofactor biosynthesis protein A [Candidatus Korarchaeum cryptofilum OPF8] Length = 310 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 33/74 (44%), Gaps = 7/74 (9%) Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + + C C FC R V ++ + ++ + + + + V TGG+PL+ Sbjct: 15 ISVTNSCNYNCFFCHREGHYVRGEE---MRPEEIGRLMRVLSKH-GVKRVKLTGGEPLMR 70 Query: 158 SHKRLQKVLKTLRY 171 L++++ L+ Sbjct: 71 RD--LEEIVSELKS 82 >gi|110643748|ref|YP_671478.1| coproporphyrinogen III oxidase [Escherichia coli 536] gi|227883662|ref|ZP_04001467.1| coproporphyrinogen III oxidase [Escherichia coli 83972] gi|300985061|ref|ZP_07177267.1| radical SAM domain protein [Escherichia coli MS 45-1] gi|300987452|ref|ZP_07178220.1| radical SAM domain protein [Escherichia coli MS 200-1] gi|301050257|ref|ZP_07197148.1| radical SAM domain protein [Escherichia coli MS 185-1] gi|110345340|gb|ABG71577.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli 536] gi|222035213|emb|CAP77958.1| oxygen independent coproporphyrinogen III oxidase [Escherichia coli LF82] gi|227839541|gb|EEJ50007.1| coproporphyrinogen III oxidase [Escherichia coli 83972] gi|300298029|gb|EFJ54414.1| radical SAM domain protein [Escherichia coli MS 185-1] gi|300306144|gb|EFJ60664.1| radical SAM domain protein [Escherichia coli MS 200-1] gi|300408221|gb|EFJ91759.1| radical SAM domain protein [Escherichia coli MS 45-1] gi|307555606|gb|ADN48381.1| putative coproporphyrinogen III oxidase [Escherichia coli ABU 83972] gi|312948061|gb|ADR28888.1| coproporphyrinogen III oxidase [Escherichia coli O83:H1 str. NRG 857C] gi|315291787|gb|EFU51141.1| radical SAM domain protein [Escherichia coli MS 153-1] gi|315296048|gb|EFU55357.1| radical SAM domain protein [Escherichia coli MS 16-3] gi|324014495|gb|EGB83714.1| radical SAM domain protein [Escherichia coli MS 60-1] Length = 445 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|116749338|ref|YP_846025.1| molybdenum cofactor biosynthesis protein A [Syntrophobacter fumaroxidans MPOB] gi|116698402|gb|ABK17590.1| GTP cyclohydrolase subunit MoaA [Syntrophobacter fumaroxidans MPOB] Length = 329 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 41/192 (21%), Positives = 68/192 (35%), Gaps = 30/192 (15%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C + G +L ++ LA I I ++ TGG+PL+ Sbjct: 18 LSITDRCNLRCTYCMPEGGVPKLAHGDILRYEEILR-LARIVTAMGISKIRITGGEPLVR 76 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS------RVPIVDPQ----RINPELIQCLKEAGKPV 207 + ++ I ++ L + R+ Q RIN L LK Sbjct: 77 RDVLF--LCGSIAGIPQLRSLSITTNGVLLGRLAGGLFQAGIKRINVSL-DTLKPGRFAS 133 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDDPEILANLMRTFVELRI 266 + EE I AG + +V+++G+NDD +A+L R E Sbjct: 134 I------TRQDCFEEVWKGIMAAHEAGFAPIKLNAVVMRGVNDD--EIADLARLTFE--- 182 Query: 267 KPYYLHHPDLAA 278 Y H Sbjct: 183 ---YPFHMRFIE 191 >gi|323141762|ref|ZP_08076632.1| putative FeS-containing Cyanobacterial-specific oxidoreductase [Phascolarctobacterium sp. YIT 12067] gi|322413751|gb|EFY04600.1| putative FeS-containing Cyanobacterial-specific oxidoreductase [Phascolarctobacterium sp. YIT 12067] Length = 427 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 31/188 (16%), Positives = 63/188 (33%), Gaps = 61/188 (32%) Query: 90 VHRYPD--------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 + +YPD + + C C FCF +M+ + + Y+++ Sbjct: 64 IEKYPDEDLGLEFDSAVFDRVATCYNNCVFCFVDQMIPGMRPGL-----------YVRDD 112 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 RL + + +++ + + + ++ Sbjct: 113 -----------------DYRLSFLYGNFITLTNMK----------------DEDFERIIR 139 Query: 202 EAGKPVYIAIHANHP--------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 P+Y+++HA P F+ + + + L +AGI + +Q V G ND EI Sbjct: 140 THLTPLYVSVHATDPQVRCQMMHNRFAGQLMERLQLLFDAGIQVHTQIVCCPGYND-GEI 198 Query: 254 LANLMRTF 261 LA Sbjct: 199 LAKSFHDL 206 >gi|302872012|ref|YP_003840648.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47] gi|302574871|gb|ADL42662.1| Radical SAM domain protein [Caldicellulosiruptor obsidiansis OB47] Length = 341 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 15/135 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + CP C FC ++ + G ++ L + E L I + E+ + GG+ Sbjct: 8 IFIPQYACPFNCIFCNQKIISGEKEEVSLDRIKRQIEQGLK-INSDEHV-ELAYYGGNFT 65 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214 + +K+L+ K ++ +R +R P I+ E ++ LK K + + I Sbjct: 66 AIDIDFQKKLLELANSFKKIKSIRISTR-----PDCIDEERLRFLKLYNVKTIELGI--- 117 Query: 215 HPYEFSEEAIAAISR 229 ++ + A +R Sbjct: 118 --QSMFDDVLNACAR 130 >gi|256842238|ref|ZP_05547742.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parabacteroides sp. D13] gi|301308989|ref|ZP_07214934.1| Fe-S oxidoreductase [Bacteroides sp. 20_3] gi|256736122|gb|EEU49452.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Parabacteroides sp. D13] gi|300833015|gb|EFK63640.1| Fe-S oxidoreductase [Bacteroides sp. 20_3] Length = 444 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 43/123 (34%), Gaps = 11/123 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C YC +C G + ++S E A + E++ TG Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQAQE--VARKGGKEIVLTGVN 205 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + +++ L ++ + R S ++P I E I K Sbjct: 206 IGDFGKSTDETFIDLIRALDEVEGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260 Query: 211 IHA 213 H Sbjct: 261 FHI 263 >gi|229198890|ref|ZP_04325581.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293] gi|228584593|gb|EEK42720.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus m1293] Length = 339 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 58/167 (34%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIARLVKIDGLLDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDIFKAINGRNINTKPVIKGIIAAKEAGLDVKVNMVVKKGMNDH 177 >gi|28211649|ref|NP_782593.1| Fe-S oxidoreductase [Clostridium tetani E88] gi|28204091|gb|AAO36530.1| Fe-S oxidoreductase [Clostridium tetani E88] Length = 433 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 42/125 (33%), Gaps = 15/125 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C + K E ++ EV +G Sbjct: 141 KTRAFLKIQDGCNSFCSYCLI-PFARGGICSKEPKKVIEEIKKLVEH--GFKEVTLSGIQ 197 Query: 154 -PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 L + + L +L+ + I+ ++ +R S + P+ ++I K Sbjct: 198 ISLYGNDFQDNWDLITLLEEIDKIEGIERVRIGS----ISPKYFKDDIIDRFSNLKK--- 250 Query: 209 IAIHA 213 + H Sbjct: 251 LCPHF 255 >gi|331685157|ref|ZP_08385743.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli H299] gi|331077528|gb|EGI48740.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli H299] Length = 445 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|212704755|ref|ZP_03312883.1| hypothetical protein DESPIG_02819 [Desulfovibrio piger ATCC 29098] gi|212671818|gb|EEB32301.1| hypothetical protein DESPIG_02819 [Desulfovibrio piger ATCC 29098] Length = 399 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 36/182 (19%), Positives = 66/182 (36%), Gaps = 34/182 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156 ++ C + C+ C G S+++ +A + Q+ +IFTGGDP++ Sbjct: 57 WEVTRSCNLACKHCRAEAHPEPYPGE-FSTEEAKALIDTF---PQVGNPIIIFTGGDPMM 112 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG-KPVYIAIH- 212 + L H + L P I PEL + +KEAG I+I Sbjct: 113 RPD------VYELVAYAHNKGLTC-----AFSPNGTLITPELARKIKEAGVNRCSISIDG 161 Query: 213 ---ANHPYEFSE------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 A+H EF ++ I L AG+ + + + ++ ++ Sbjct: 162 ADAASH-DEFRGVPGAFDASMRGIEYLKQAGVPFQINTTVTR---NNLHSFKDIFNLCER 217 Query: 264 LR 265 + Sbjct: 218 IG 219 >gi|296332403|ref|ZP_06874864.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305673684|ref|YP_003865356.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii str. W23] gi|296150321|gb|EFG91209.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305411928|gb|ADM37047.1| coproporphyrinogen III oxidase [Bacillus subtilis subsp. spizizenii str. W23] Length = 501 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 26/161 (16%), Positives = 57/161 (35%), Gaps = 15/161 (9%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131 I D + + + + + + CP C +C + + S Sbjct: 153 IVDRQLAAVPDLYQVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 212 Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189 + +++E ++ + F GG P ++ + + + + + R V+ +R + V P Sbjct: 213 QKIGEWLKEHDVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREIT-VEAGRP 271 Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 I E + L + + I P + E + AI R Sbjct: 272 DTITEEKLAVLNKYDIDRISIN-----PQSYENETLKAIGR 307 >gi|212697105|ref|ZP_03305233.1| hypothetical protein ANHYDRO_01670 [Anaerococcus hydrogenalis DSM 7454] gi|212675880|gb|EEB35487.1| hypothetical protein ANHYDRO_01670 [Anaerococcus hydrogenalis DSM 7454] Length = 432 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 20/120 (16%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT-- 150 R +K+ C +YC +C ++S+D + + + + E++ T Sbjct: 142 TRSYIKIQDGCNMYCSYCLI-----PYARGNIASRDLVSIIDEAKRLRDNGFKEIVLTGI 196 Query: 151 -----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L L+ + V++ + I ++ +R S ++P+ I+ E +Q +K+ K Sbjct: 197 HVASYGKD-LDLNISLID-VIEHIAKIDGIERIRLSS----MEPRHIDREFLQRMKDTKK 250 >gi|116670001|ref|YP_830934.1| molybdenum cofactor biosynthesis protein A [Arthrobacter sp. FB24] gi|116610110|gb|ABK02834.1| GTP cyclohydrolase subunit MoaA [Arthrobacter sp. FB24] Length = 347 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 39/182 (21%), Positives = 72/182 (39%), Gaps = 34/182 (18%) Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 G++ RY R L L C + C +C E + K V+S+++ + + Sbjct: 4 GLMDRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLAKQAVMSAEEIVRIVRIGVDMLG 63 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELI 197 + E+ TGG+PL+ + L ++ LR H +PI + + Sbjct: 64 VRELRLTGGEPLVRAD--LLDIISALRQA--------HPELPIS----MTTNAVGLDKKA 109 Query: 198 QCLKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGI 247 LK AG + +++ + H F++ AG+ + +VL++GI Sbjct: 110 AGLKAAGLSRINVSLDSLHEETFTKLTRRPFLDKVLAGVDAAWAAGLGPVKLNAVLMRGI 169 Query: 248 ND 249 ND Sbjct: 170 ND 171 >gi|294784572|ref|ZP_06749861.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. 3_1_27] gi|294487788|gb|EFG35147.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. 3_1_27] Length = 348 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148 ++ + + CP C FC ++++ G + +S D + + Y++ I +V Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59 Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G Sbjct: 60 FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113 Query: 205 KPVY 208 Sbjct: 114 VKTI 117 >gi|260496870|ref|ZP_05815990.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium sp. 3_1_33] gi|260196612|gb|EEW94139.1| glucosamine 6-phosphate N-acetyltransferase [Fusobacterium sp. 3_1_33] Length = 348 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148 ++ + + CP C FC ++++ G + +S D + + Y++ I +V Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59 Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G Sbjct: 60 FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113 Query: 205 KPVY 208 Sbjct: 114 VKTI 117 >gi|256027059|ref|ZP_05440893.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. D11] gi|289765043|ref|ZP_06524421.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. D11] gi|289716598|gb|EFD80610.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. D11] Length = 348 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148 ++ + + CP C FC ++++ G + +S D + + Y++ I +V Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59 Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G Sbjct: 60 FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113 Query: 205 KPVY 208 Sbjct: 114 VKTI 117 >gi|237743503|ref|ZP_04573984.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. 7_1] gi|229433282|gb|EEO43494.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. 7_1] Length = 348 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148 ++ + + CP C FC ++++ G + +S D + + Y++ I +V Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59 Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G Sbjct: 60 FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113 Query: 205 KPVY 208 Sbjct: 114 VKTI 117 >gi|19703498|ref|NP_603060.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] gi|19713586|gb|AAL94359.1| Oxygen-independent coproporphyrinogen III oxidase [Fusobacterium nucleatum subsp. nucleatum ATCC 25586] Length = 348 Score = 42.0 bits (98), Expect = 0.12, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148 ++ + + CP C FC ++++ G + +S D + + Y++ I +V Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59 Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G Sbjct: 60 FFGG-TFTGISMNLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113 Query: 205 KPVY 208 Sbjct: 114 VKTI 117 >gi|319650177|ref|ZP_08004324.1| HemZ protein [Bacillus sp. 2_A_57_CT2] gi|317398109|gb|EFV78800.1| HemZ protein [Bacillus sp. 2_A_57_CT2] Length = 504 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 31/161 (19%), Positives = 66/161 (40%), Gaps = 15/161 (9%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDT 131 I D + + + + + + + CP C +C F + ++G+V S + Sbjct: 155 IVDRQLAVVPDLYNLKNEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVNSFLGGLHFEM 214 Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDP 189 +++E +I V + GG P ++ + + + + + V+ +R + V P Sbjct: 215 RKIGEWLKENDVKITTVYYGGGTPTSITAEEMDMLYEEMYDSFPDVENIREVT-VEAGRP 273 Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 I PE ++ LK+ + I P + +E + AI R Sbjct: 274 DTITPEKLEVLKKWNIDRISIN-----PQSYIQETLKAIGR 309 >gi|229032383|ref|ZP_04188354.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271] gi|228728946|gb|EEL79951.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus AH1271] Length = 339 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKLFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I+ + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIARLVKIEGLVDIGLTTNAI-----HLTKQ-AKVLKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDVFKAINGRNINTKPVIKGIMAAKEAGLDVKVNMVVKKGMNDH 177 >gi|120601413|ref|YP_965813.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4] gi|120561642|gb|ABM27386.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4] Length = 327 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 11/96 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI------QEKSQIWEV 147 P + L+L + C + C FC M G+ + + + +A + + + +I V Sbjct: 7 PRVVNLELTNRCDMGCVFCDHAAMRGTMRMGDMPPERLDAIVDQLLDALAGRRLPEIGMV 66 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHS 182 G+P++ ++ L+ L +L I H + F+S Sbjct: 67 GL--GEPML--NRHLETHLASLARIAPHCDRVTFNS 98 >gi|134295140|ref|YP_001118875.1| molybdenum cofactor biosynthesis protein A [Burkholderia vietnamiensis G4] gi|134138297|gb|ABO54040.1| GTP cyclohydrolase subunit MoaA [Burkholderia vietnamiensis G4] Length = 370 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%) Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118 P+ D + P + G+ H PD L + + C C +C F ++ Sbjct: 7 PLADVSAMPDISGVAHT-PDGALTDRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKDYP 65 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 +L+ ++ E + ++ TGG+PL+ K L+ +++ L + Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116 >gi|297529334|ref|YP_003670609.1| RNA modification enzyme, MiaB family [Geobacillus sp. C56-T3] gi|297252586|gb|ADI26032.1| RNA modification enzyme, MiaB family [Geobacillus sp. C56-T3] Length = 449 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 19/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C FC G + + + A + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPQEIIRQARQLVAA--GYKEIVLTGIH 198 Query: 151 ----GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L +L+ L + ++ LR S ++ +I E+I LK + K Sbjct: 199 TGGYGTD---LKDYNFASLLRDLDEQVPGLRRLRISS----IEASQITDEVIDVLKRSEK 251 Query: 206 PVYIAIHA 213 + +H Sbjct: 252 -IVRHLHI 258 >gi|289191984|ref|YP_003457925.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22] gi|288938434|gb|ADC69189.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22] Length = 426 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 38/242 (15%), Positives = 85/242 (35%), Gaps = 57/242 (23%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPL- 155 +++ CP C FC + G + + E Y I + + ++ F + Sbjct: 177 IEITRGCPYGCYFCQTPRIFGKN----VRHRSIENICKYVEIMAERNLKDIRFITPNAFG 232 Query: 156 -------ILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 L+ +++K+L+ +R I + + F + V P+ +N E + + + Sbjct: 233 YGSKDGKTLNIDKVEKLLENIREILGNNGRIFFGTFPSEVRPEHVNDETVDLILKYADNK 292 Query: 208 YIAI-------------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI------- 247 + + H H E + A++ GI SV L I Sbjct: 293 SLVVGAQSGSQRILDLCHRGHTVE---DIYNAVTTAIKKGI-----SVSLDFIFGLPGET 344 Query: 248 NDDPEILANLMRTFVELRIKPY-YLHHPDLAAGTSHFRLTIEEG------QKIVASLKEK 300 +D E +M+ +++ K + + P + + +KI+ +++ + Sbjct: 345 EEDVEKTIKVMKDLIKMGAKIHAHTFMPLP-------QTPFAKANPGVVNKKIIRAMRHE 397 Query: 301 IS 302 I Sbjct: 398 IP 399 >gi|229076235|ref|ZP_04209202.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock4-18] gi|228706884|gb|EEL59090.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock4-18] Length = 339 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIARLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177 >gi|229578332|ref|YP_002836730.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14] gi|228009046|gb|ACP44808.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14] Length = 394 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 8/120 (6%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 + + +P+ L + EE ++ + + + L L + C C +CF++ Sbjct: 33 LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173 G +K +S K + YI++ + +V T GG+PL L ++++++ + L +K Sbjct: 91 ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146 >gi|226324718|ref|ZP_03800236.1| hypothetical protein COPCOM_02504 [Coprococcus comes ATCC 27758] gi|225207166|gb|EEG89520.1| hypothetical protein COPCOM_02504 [Coprococcus comes ATCC 27758] Length = 446 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 38/153 (24%), Positives = 58/153 (37%), Gaps = 24/153 (15%) Query: 67 LNILPEERED---PIGDNNHSPLKGIVHRYPDR----ILLKLLHVCPVYCRFCFRREMVG 119 L+ P ER D + D ++ P+ HR LK+ C +C +C V Sbjct: 116 LSDSPMERGDVRLTMKDVDYLPVTD-THRMVTTGGHFAYLKIAEGCDKHCTYCII-PKVR 173 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYI 172 +V E A + E+I G D + KRL ++L+ L I Sbjct: 174 GDFRSVPMEHLLEEAQN--LADGGVKELILVAQETTMYGTD--LYGEKRLPQLLRALCKI 229 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 ++ +R P+ I ELIQ +KE K Sbjct: 230 SGLRWIRI----LYCYPEEITDELIQVIKEEPK 258 >gi|227829999|ref|YP_002831778.1| radical SAM protein [Sulfolobus islandicus L.S.2.15] gi|229582731|ref|YP_002841130.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51] gi|227456446|gb|ACP35133.1| Radical SAM domain protein [Sulfolobus islandicus L.S.2.15] gi|228013447|gb|ACP49208.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51] Length = 394 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 8/120 (6%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 + + +P+ L + EE ++ + + + L L + C C +CF++ Sbjct: 33 LRKGIVPEH--LKDIIEEGFSAADEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173 G +K +S K + YI++ + +V T GG+PL L ++++++ + L +K Sbjct: 91 ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146 >gi|46581412|ref|YP_012220.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|46450834|gb|AAS97480.1| radical SAM domain protein [Desulfovibrio vulgaris str. Hildenborough] gi|311235069|gb|ADP87923.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1] Length = 327 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 21/96 (21%), Positives = 43/96 (44%), Gaps = 11/96 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI------QEKSQIWEV 147 P + L+L + C + C FC M G+ + + + +A + + + +I V Sbjct: 7 PRVVNLELTNRCDMGCVFCDHAAMRGTMRMGDMPPERLDAIVDQLLDALAGRRLPEIGMV 66 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHS 182 G+P++ ++ L+ L +L I H + F+S Sbjct: 67 GL--GEPML--NRHLETHLASLARIAPHCDRVTFNS 98 >gi|322806672|emb|CBZ04241.1| ribosomal protein S12p Asp88 (E. coli) methylthiotransferase [Clostridium botulinum H04402 065] Length = 445 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%) Query: 91 HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 H+Y D RIL + C +C +C + G + ++ + Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184 Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + ++ + E+I D + K L ++L+ + ++ V+ +R P+ Sbjct: 185 ENLAKQ-GVREIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239 Query: 191 RINPELIQCLKEAGK 205 I ELI+ +K K Sbjct: 240 EITKELIEEIKNNDK 254 >gi|307730551|ref|YP_003907775.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. CCGE1003] gi|307585086|gb|ADN58484.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. CCGE1003] Length = 369 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 20/113 (17%) Query: 77 PIGDNNHSPL--------KGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQ--- 121 P+ D + +P+ G++H R L + + C C +C R + Sbjct: 7 PVADLSAAPVISGPLQTPSGVLHDTLARPLRDLRISVTDRCNFRCVYCMPRAIFDKDYAF 66 Query: 122 --KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 +LS ++ E + ++ TGG+PL+ K L+ +++ L + Sbjct: 67 LPHSALLSFEEIERLARLFVAH-GVEKIRLTGGEPLL--RKNLEFLIERLAQL 116 >gi|2226152|emb|CAA74441.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168] Length = 346 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 54/153 (35%), Gaps = 15/153 (9%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EAALAYIQ 139 + + + + + CP C +C + + S + +++ Sbjct: 6 VPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEMQKIGEWLK 65 Query: 140 EKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELI 197 E ++ + F GG P ++ + + + + + R V+ +R + V P I E + Sbjct: 66 EHDVKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVKNIREIT-VEAGRPDTITEEKL 124 Query: 198 QCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 L + + I P + E + AI R Sbjct: 125 AVLNKYDIDRISIN-----PQSYENETLKAIGR 152 >gi|296271625|ref|YP_003654256.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter nitrofigilis DSM 7299] gi|296095800|gb|ADG91750.1| nitrogenase cofactor biosynthesis protein NifB [Arcobacter nitrofigilis DSM 7299] Length = 482 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 49/218 (22%), Positives = 76/218 (34%), Gaps = 58/218 (26%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEK-SQ 143 H++ RI + + C + C +C R+ E LS +D + Y+ Q Sbjct: 32 AHQHYARIHVAVAPACNIQCNYCNRKFDCSNESRPGVTSAKLSPEDAVKKVLYVGGDIQQ 91 Query: 144 IWEVIFTG-GDPLILSHK------------------------RLQKVLKTL--RYIKHVQ 176 + V G GD L K RL + + + HV Sbjct: 92 LSVVGIAGPGDALANPKKTFDTFRMLHEKAPDQKLCLSTNGLRLPDYVDEMVKYNVDHV- 150 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIA--------AIS 228 + +S VDP E G +Y +H NH F E I Sbjct: 151 TVTINS----VDPT----------GEIGAKIYPWVHWNHEKVFGAEGAKILLEQQLKGIK 196 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 L GI++ + SVL+ G+ND + L N+ + EL + Sbjct: 197 MLTERGILVKANSVLIPGVND--KELVNVAKKLKELNV 232 >gi|284039515|ref|YP_003389445.1| molybdenum cofactor biosynthesis protein A [Spirosoma linguale DSM 74] gi|283818808|gb|ADB40646.1| molybdenum cofactor biosynthesis protein A [Spirosoma linguale DSM 74] Length = 326 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 38/218 (17%), Positives = 75/218 (34%), Gaps = 25/218 (11%) Query: 99 LKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C E + K VL+ ++ E + + + +V TGG+P + Sbjct: 15 LAVTDRCNLRCFYCMPEEGIKYLPKHQVLTYEEMERLVRVLAR-LGVQKVRITGGEPFV- 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI------ 211 L L L I + + + + P + L + + Sbjct: 73 -RAGLMDFLHRLAEIDGLNDISLTTNGVLTAPH---IPALAALGVKSVNLSLDTLDRERF 128 Query: 212 -HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTF-VELRIKP 268 E + + L AGI +V++ G N D L + RT V++R Sbjct: 129 YKITRRDEL-PAVLKTLDALLEAGIQTKINAVVMDGQNTQDLVPLTEMTRTMPVDVR--- 184 Query: 269 YYLHHPDLA--AGTSHFRLTIEEGQKIVASLKEKISGL 304 ++ SH+ + ++I+ ++ L Sbjct: 185 ---FIEEMPFNGEGSHYPVLNWTHRRIIDEIRAHFPDL 219 >gi|222100234|ref|YP_002534802.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359] gi|221572624|gb|ACM23436.1| AstB/chuR-related protein [Thermotoga neapolitana DSM 4359] Length = 437 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 27/163 (16%) Query: 62 PQKEELNILPEER--------EDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCR 110 P EL+ E+ +D + + +RY DR L + L H C C Sbjct: 27 PSSAELSKAEVEKLKRGMFLLDDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCV 86 Query: 111 FCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK--R 161 +C+++ ++ G+ +S K D E L Y +K + V F GG+PL+L Sbjct: 87 YCYQK-VIHISSGSYISEKVQSNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEETVVN 143 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 L LK L V+ F + + + +++ L++AG Sbjct: 144 LSSKLKRLCEKYGVKYDSF----IVTNGYLLTEKMVDDLQKAG 182 >gi|210621258|ref|ZP_03292564.1| hypothetical protein CLOHIR_00507 [Clostridium hiranonis DSM 13275] gi|210154869|gb|EEA85875.1| hypothetical protein CLOHIR_00507 [Clostridium hiranonis DSM 13275] Length = 349 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 50/254 (19%), Positives = 87/254 (34%), Gaps = 55/254 (21%) Query: 43 IANLINPHNPNDPIARQFIPQKEE----LNILPEEREDPIGDNNHSPLKGIVHRYPDRI- 97 + NLI+ N Q + KEE L I ++ D + + I Y R+ Sbjct: 1 MKNLIDKLEKN-----QIL-SKEEFVRLLAISEKDDIDYLTERAKCVRDDI---YGKRVF 51 Query: 98 ---LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 L+++ + C C +C R + + LS + + E V+ G D Sbjct: 52 IRGLIEISNYCKNDCYYCGIRRSNKNAQRYRLSKEQILSCCENGYELGFRTFVMQGGEDA 111 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVP---IVDP--QRINPELIQCLKEAGKPVYI 209 + ++ +++ R P + +R + +KEAG Y+ Sbjct: 112 FF-KDDVVCDIVSSIKE-----------RYPDCAVTLSLGERSTESY-RKMKEAGADRYL 158 Query: 210 -------AIHAN--HPYEFSEEAIAAISRLANA-------GIILLS--QSVLLKGINDDP 251 IH N HP E E R A GI++ S Q+ L+ I +D Sbjct: 159 LRHETFDNIHYNKLHPVELDPENRKRCLRDLKALRYQTGTGIMVGSPYQT--LENIAEDL 216 Query: 252 EILANLMRTFVELR 265 + L + + Sbjct: 217 LFIKELNPEMIGIG 230 >gi|148270585|ref|YP_001245045.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1] gi|170289289|ref|YP_001739527.1| radical SAM domain-containing protein [Thermotoga sp. RQ2] gi|281412894|ref|YP_003346973.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10] gi|147736129|gb|ABQ47469.1| Radical SAM domain protein [Thermotoga petrophila RKU-1] gi|170176792|gb|ACB09844.1| Radical SAM domain protein [Thermotoga sp. RQ2] gi|281373997|gb|ADA67559.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10] Length = 454 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 27/163 (16%) Query: 62 PQKEELNILPEER--------EDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCR 110 P EL+ E+ +D + + +RY DR L + L H C C Sbjct: 44 PSSAELSKAEVEKLKRGMFLLDDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCV 103 Query: 111 FCFRREMVGSQKGTVLSSK-------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK--R 161 +C+++ ++ G+ +S K D E L Y +K + V F GG+PL+L Sbjct: 104 YCYQK-VIHISSGSYISEKVQSNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEETVVN 160 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 L LK L V+ F + + + +++ L++AG Sbjct: 161 LSSKLKRLCEKYGVKYDSF----IVTNGYLLTEKMVDDLQKAG 199 >gi|18977826|ref|NP_579183.1| hypothetical protein PF1454 [Pyrococcus furiosus DSM 3638] gi|18893579|gb|AAL81578.1| hypothetical protein PF1454 [Pyrococcus furiosus DSM 3638] Length = 588 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 49/249 (19%), Positives = 83/249 (33%), Gaps = 54/249 (21%) Query: 91 HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQI--W 145 HR +L + L + C + C +CF + V + + L ++++ I Sbjct: 136 HRSHTNLLNIVLTNRCNLSCWYCF---FYAREGEPVYEPTLEQIRMMLRNAKKENPIGAN 192 Query: 146 EVIFTGGDPLILSHKRLQKV-LKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCL 200 V FTGG+P L ++ + + HVQ+ +R PEL++ + Sbjct: 193 AVQFTGGEP-TLRDDLIEIIKIAKEEGYDHVQLNTDGIRLA----------FEPELVKKI 241 Query: 201 KEAGKPVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 +EAG + NH E + + GI+L+ L++ +ND Sbjct: 242 REAGVNTLYLSYDGMTPQTNWKNHW-EI-PLIFENVRKAGGPGIVLV--PTLIRNVNDHE 297 Query: 252 E---ILANLMRTFVELRIKPYYLHHP------DLAAGTSHFRLTIEEGQ-KIVASLKEKI 301 I L + + P FR+TI KI I Sbjct: 298 AGAIINFGLNHLDIVRGVN----FQPISLVGRVPKKERQRFRITIAGAIKKIEEQTNGAI 353 Query: 302 S---GLCQP 307 S P Sbjct: 354 SRDDWYPIP 362 >gi|302875219|ref|YP_003843852.1| Radical SAM domain-containing protein [Clostridium cellulovorans 743B] gi|307688900|ref|ZP_07631346.1| biotin synthase [Clostridium cellulovorans 743B] gi|302578076|gb|ADL52088.1| Radical SAM domain protein [Clostridium cellulovorans 743B] Length = 346 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 43/109 (39%), Gaps = 18/109 (16%) Query: 76 DPIGDNNHSPLKGIVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 D + S + +Y R LL+ +VC C +C R + + LS + Sbjct: 26 DQYDEELFSAANRVTEKYLGNQVELRGLLEFTNVCKRNCLYCGLRRENNNIERYRLSKEQ 85 Query: 131 T----EAALAYIQEKSQIWEVIFTGG--DPLILSHKRLQKVLKTLRYIK 173 + A++Y ++ GG D + +RL +++K ++ + Sbjct: 86 ILDFSKKAVSY-----GYNTIVLQGGEDDYFTV--ERLSEIIKEIKQLD 127 >gi|198277605|ref|ZP_03210136.1| hypothetical protein BACPLE_03827 [Bacteroides plebeius DSM 17135] gi|198270103|gb|EDY94373.1| hypothetical protein BACPLE_03827 [Bacteroides plebeius DSM 17135] Length = 153 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 23/59 (38%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C C+ C E + G L+ + E + I + V F+GGDP + L Sbjct: 26 GCAHRCKGCHNPESWNPKAGKPLTQEVLEQIIQEINANPLLDGVTFSGGDPFYNPEEFL 84 >gi|323692752|ref|ZP_08106980.1| hypothetical protein HMPREF9475_01843 [Clostridium symbiosum WAL-14673] gi|323503194|gb|EGB19028.1| hypothetical protein HMPREF9475_01843 [Clostridium symbiosum WAL-14673] Length = 436 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 23/132 (17%) Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R +K+ C +C +C R + G V+ + AA Y E++ Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRAIGDVVKEVEGLAAAGY-------KEIVL 194 Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 T G D + L ++ L I+ ++ +R S ++P+ I E + L Sbjct: 195 TGIHLSSYGVDFSEEKRENLLSLITCLDKIQGIERIRLGS----LEPRIITEEFVSALAG 250 Query: 203 AGKPVYIAIHAN 214 K + H + Sbjct: 251 L-KSICPHFHLS 261 >gi|297531012|ref|YP_003672287.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. C56-T3] gi|297254264|gb|ADI27710.1| molybdenum cofactor biosynthesis protein A [Geobacillus sp. C56-T3] Length = 341 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 L + C C +C E+ G + +L+ ++ A LA + + ++ TGG+ Sbjct: 22 LSVTDQCNFRCVYCMPAEVFGPNFRFLAEDQLLTVEEM-ALLAECFVELGVEKIRLTGGE 80 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ L +++ L + ++ + Sbjct: 81 PLLRRD--LDALIERLSALPGLRDI 103 >gi|283780939|ref|YP_003371694.1| MiaB-like tRNA modifying enzyme YliG [Pirellula staleyi DSM 6068] gi|283439392|gb|ADB17834.1| MiaB-like tRNA modifying enzyme YliG [Pirellula staleyi DSM 6068] Length = 465 Score = 42.0 bits (98), Expect = 0.13, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 53/154 (34%), Gaps = 25/154 (16%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150 LK+ C C FC +M G K ++ + VI Sbjct: 164 AYLKISEGCDRLCTFCAIPKMRG--KHATKPMEEVLKEARQLAADGVKELVIVAQDTTYY 221 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209 G D + RL ++L+ + ++ +Q +R P I ELI + ++ K V YI Sbjct: 222 GID--LYGEPRLAELLREIEKVEGIQWIRL----MYFYPMYITDELIDVIAKSEKIVPYI 275 Query: 210 AI---HANH------PYEFS-EEAIAAISRLANA 233 + H N + E I +L A Sbjct: 276 DMPLQHINDTMLRRMSRRVTRAETELQIKKLREA 309 >gi|282860156|ref|ZP_06269231.1| MiaB-like protein [Prevotella bivia JCVIHMP010] gi|282587045|gb|EFB92275.1| MiaB-like protein [Prevotella bivia JCVIHMP010] Length = 451 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C +C G + ++S K E A+A E++ TG Sbjct: 158 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVKQAEEAVA-----EGGREIVLTG 212 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GD + + ++K L ++ ++ R S ++P I+ ELI + Sbjct: 213 VNIGDFGRTTSESFLDLVKALDKVEGIERYRISS----LEPDLIDDELIAYCATSKH--- 265 Query: 209 IAIHA 213 H Sbjct: 266 FMPHF 270 >gi|269139692|ref|YP_003296393.1| molybdenum cofactor biosynthesis protein A [Edwardsiella tarda EIB202] gi|267985353|gb|ACY85182.1| molybdenum cofactor biosynthesis protein A [Edwardsiella tarda EIB202] gi|304559561|gb|ADM42225.1| Molybdenum cofactor biosynthesis protein A [Edwardsiella tarda FL6-60] Length = 328 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 42/259 (16%), Positives = 81/259 (31%), Gaps = 55/259 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L + VC C +C LS + +V TGG+P + Sbjct: 17 LSVTDVCNFRCTYCLPDGYRPDSHAAKRFLSRDEIRRISHAFAALGT-EKVRLTGGEPTL 75 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-- 214 ++ +R ++ L + R+ ++ ++AG I + + Sbjct: 76 RRD--FCDIVAAVRENPAIRTL-----AVTTNGYRMARDVGAW-RDAGLT-AINVSVDSL 126 Query: 215 -----HPYEFSEEAIAA-----ISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE 263 H + E A I +AG + +VL++G+ND +L Sbjct: 127 DARQFHA--ITGEDRFAQVMAGIDAAFDAGFERIKVNTVLMRGVND-----GSLKAFLHW 179 Query: 264 LRIKPYYLHHPDLAA------GTSHFR---LTIE--EGQKIVASLKEKISGLCQPFYILD 312 +R +P G+ FR ++ Q + A + ++ G Sbjct: 180 IRRRP---IQMRFIELMETGDGSELFRRHHVSGATIRAQLLAAGWQRRLPGR-------- 228 Query: 313 LPGGYGKVKIDTHNIKKVG 331 G +V + +VG Sbjct: 229 -SDGPAQVFWHPDYLGEVG 246 >gi|319793190|ref|YP_004154830.1| molybdenum cofactor biosynthesis protein a [Variovorax paradoxus EPS] gi|315595653|gb|ADU36719.1| molybdenum cofactor biosynthesis protein A [Variovorax paradoxus EPS] Length = 386 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 12/97 (12%) Query: 85 PLKGIVHRYPDRIL----LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAAL 135 P G++ R L + + C C +C F ++ +LS ++ Sbjct: 31 PATGLLRDRLGRPLTDLRISVTDRCNFRCSYCMPKDVFDKDYKYLPHSALLSFEEMTRLA 90 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 + ++ TGG+PL+ K ++ +++ L I Sbjct: 91 RLFAAH-GVRKIRLTGGEPLL--RKNIEALIEQLAEI 124 >gi|257094392|ref|YP_003168033.1| Radical SAM domain-containing protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046916|gb|ACV36104.1| Radical SAM domain protein [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 332 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 3/77 (3%) Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 + R + + + L + C C C G Q+ ++++ +A LA+I ++ Sbjct: 14 PALTRRSVETVQVNLGYRCNQSCLHCHVNA--GPQRKEEMTAETIDALLAFIAASPEVKV 71 Query: 147 VIFTGGDP-LILSHKRL 162 + TGG P L + +RL Sbjct: 72 LDLTGGAPELNPNFRRL 88 >gi|124009850|ref|ZP_01694518.1| radical SAM domain protein [Microscilla marina ATCC 23134] gi|123984171|gb|EAY24532.1| radical SAM domain protein [Microscilla marina ATCC 23134] Length = 310 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 65/166 (39%), Gaps = 28/166 (16%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 + + +C C C+ + KG +S ++ + + +I +I +GG+P Sbjct: 9 ESVYWVFTQLCNDQCAHCY---NLSGPKGAKMSEEECMQIIENLP--PKIDRIILSGGEP 63 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF--HSR-VPIVDPQRINPELIQCLKEAGKPVYIAI 211 L ++L +L L+ R+ H++ + + + E++ L G + Sbjct: 64 L-AERQKLYAILDRLKQ-------RYPAHTQLMLQTNGDLLTEEILDTLIAKGVTRFDIA 115 Query: 212 HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILAN 256 F + A A ++ LA+ +G+N DD + L + Sbjct: 116 SI---DRFHKNAGARLTELADMFAS--------RGVNGDDKDPLVD 150 >gi|317152637|ref|YP_004120685.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio aespoeensis Aspo-2] gi|316942888|gb|ADU61939.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio aespoeensis Aspo-2] Length = 333 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 40/255 (15%), Positives = 89/255 (34%), Gaps = 47/255 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C +L ++ + + + + + FTGG+P + Sbjct: 18 ISVTDRCNLRCTYCAGEGQEFVPHSDILRYEEILELMD-MATRLGMVKFRFTGGEPFV-R 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPY 217 ++ V + + + E + L +G + V I++ P Sbjct: 76 KGFADFLIAAAARFPGVDMC-------VTTNATLIGEHVDRLASSGVRRVNISLDTLDPE 128 Query: 218 EFS--------EEAIAAISRLANAGIILLSQSVLLKGINDD--PEILANLMRTFVELRIK 267 +F + A I R +AG+++ +V +KGIND P + +++R Sbjct: 129 KFHRVTGFDKYDVVRANIDRCLDAGMVVKVNAVAMKGINDGELPGFIEFARSRPLDMR-- 186 Query: 268 PYYLHHPDLAAGTS-----HFRLTIEEGQKIVASL-----------KEKISGLCQPFYIL 311 + G H ++ + + I+A + + G P Sbjct: 187 ----FIEFMPVGLETGWSDH---SVWKAEDILAQASALAELVPSGGEGNVPG--GPARTF 237 Query: 312 DLPGGYGKVKIDTHN 326 D+ GG G++ + + Sbjct: 238 DIVGGQGRIGVISPY 252 >gi|153812695|ref|ZP_01965363.1| hypothetical protein RUMOBE_03102 [Ruminococcus obeum ATCC 29174] gi|149831211|gb|EDM86300.1| hypothetical protein RUMOBE_03102 [Ruminococcus obeum ATCC 29174] Length = 419 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 31/132 (23%) Query: 96 RILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R +K+ C +C +C R + + VL +T AA Y EV+ TG Sbjct: 124 RAYIKVQDGCNQFCTYCIIPFARGRVRSRKIEDVLREVETLAAKGY-------KEVVLTG 176 Query: 152 GDPLILS----------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 LS + L +++ + ++ + +R S ++P+ I E ++ + Sbjct: 177 I---HLSSYGVDFPKEERESLLSLIQAVSRVEGISRIRLGS----LEPRIITEEFLEGIV 229 Query: 202 EAGKPVYIAIHA 213 + GK + H Sbjct: 230 KTGK---VCPHF 238 >gi|56421035|ref|YP_148353.1| hypothetical protein GK2500 [Geobacillus kaustophilus HTA426] gi|261418482|ref|YP_003252164.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC61] gi|319767557|ref|YP_004133058.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC52] gi|56380877|dbj|BAD76785.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] gi|261374939|gb|ACX77682.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC61] gi|317112423|gb|ADU94915.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y412MC52] Length = 449 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 46/128 (35%), Gaps = 19/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C FC G + + + A + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPQEIIRQARQLVAA--GYKEIVLTGIH 198 Query: 151 ----GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L +L+ L + ++ LR S ++ +I E+I LK + K Sbjct: 199 TGGYGTD---LKDYNFASLLRDLDEQVPGLKRLRISS----IEASQITDEVIDVLKRSEK 251 Query: 206 PVYIAIHA 213 + +H Sbjct: 252 -IVRHLHI 258 >gi|326407736|gb|ADZ64807.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis subsp. lactis CV56] Length = 707 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 28/184 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C+FC+ + +G L + L I + + V GG+P Sbjct: 13 WMLTNKCNLRCKFCY----LEDYQGKELELDEINQVLD-IIQDKEFTHVSLLGGEP--TE 65 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHANHP 216 + + ++ L LR S + Q++ N ELI+ L ++ + I P Sbjct: 66 CEYFEHIIIQLEK------LRI-SYSFSTNGQKLFRNEELIRILSKSKYLKEVQISLESP 118 Query: 217 YEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF--VEL 264 + +A+ +++ L + V+ K N + + ++ T EL Sbjct: 119 QKLINDAVRGKGTFESAIKSVALLVKENVPTRLAMVVTKENNSTIQQMIDMCATLGCREL 178 Query: 265 RIKP 268 R+ P Sbjct: 179 RLMP 182 >gi|227486728|ref|ZP_03917044.1| 2-methylthioadenine synthetase [Anaerococcus lactolyticus ATCC 51172] gi|227235316|gb|EEI85331.1| 2-methylthioadenine synthetase [Anaerococcus lactolyticus ATCC 51172] Length = 432 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 46/118 (38%), Gaps = 16/118 (13%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152 R +K+ C +YC +C G+ + S K+ E ++ E++ TG Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNVVSRPMDSIVKEAERL-----AENGFKEIVLTGI 196 Query: 153 DPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L V++ + + ++ +R S ++P+ I + ++ +K K Sbjct: 197 HVASYGKDFKDGISLIDVIENVAKVDGIKRIRLSS----MEPRHITRDFLERMKATKK 250 >gi|170041251|ref|XP_001848384.1| molybdopterin cofactor synthesis protein a [Culex quinquefasciatus] gi|167864830|gb|EDS28213.1| molybdopterin cofactor synthesis protein a [Culex quinquefasciatus] Length = 553 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 40/207 (19%), Positives = 79/207 (38%), Gaps = 33/207 (15%) Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQ 139 SPL R+ + + L C + C++C E V + K ++L++ + LA + Sbjct: 27 EEASPLTDKFGRFHSYLRISLTERCNLRCKYCMPEEGVPLTAKDSLLTTDEVLR-LAGLF 85 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + + ++ TGG+P + L ++ L+ I ++ + + + + +L+ Sbjct: 86 VREGVRKIRLTGGEPTVRKD--LTDIVAALKRIPSLESVGITTNGLM-----LTRQLVGL 138 Query: 200 LKEA--GKPVYIAIHANHPYEFSEEAIAAISRLAN-----AGIILLSQ--------SVLL 244 + G + + I+R AGI L Q VL+ Sbjct: 139 QRAGLDGLNISLDT-------LKAAKYERITRRKGWERVIAGIDLAIQLGYKPKVNCVLM 191 Query: 245 KGINDDP--EILANLMRTFVELRIKPY 269 KG NDD + + V++R Y Sbjct: 192 KGFNDDELCDFVEMTRDRCVDIRFIEY 218 >gi|115351039|ref|YP_772878.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria AMMD] gi|115281027|gb|ABI86544.1| GTP cyclohydrolase subunit MoaA [Burkholderia ambifaria AMMD] Length = 370 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%) Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118 P+ D + P + G+ H PD L + + C C +C F ++ Sbjct: 7 PLADVSGMPDISGVAHT-PDGALADRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKDYP 65 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 +L+ ++ E + ++ TGG+PL+ K L+ +++ L + Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116 >gi|256751948|ref|ZP_05492818.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749153|gb|EEU62187.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 333 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 15/117 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 ++L + C + C +C+++ ++GS+ +L K + + + + VI GG+PL+ Sbjct: 24 IELTNRCNLDCIYCYKK-VIGSRNDDILPEKAIDIIVENLGSNPAVL-VILEGGEPLLHP 81 Query: 159 HKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + ++ +K V IL + + P+ I +L + + V I++ Sbjct: 82 -----RFIEIFYKLKEYSVAVDILTNGT---LFTPE-IVHDLAKIFSQKYDSVQISL 129 >gi|167630039|ref|YP_001680538.1| radical sam [Heliobacterium modesticaldum Ice1] gi|167592779|gb|ABZ84527.1| radical sam [Heliobacterium modesticaldum Ice1] Length = 331 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 16/106 (15%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 + C ++C C+R G + L++++ + L I + + +IF+GG+PL+ Sbjct: 7 TTNQCNMFCDHCYRDA--GVKADQELNTQEGKQLLDEIAK-AGFKIMIFSGGEPLMRPD- 62 Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204 + L + LR F + + I EL + LK+AG Sbjct: 63 -----IVELVAYATSKGLRSVFGTNGTL-----ITRELARDLKKAG 98 >gi|146297144|ref|YP_001180915.1| MiaB-like tRNA modifying enzyme YliG [Caldicellulosiruptor saccharolyticus DSM 8903] gi|238065313|sp|A4XLD9|RIMO_CALS8 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|145410720|gb|ABP67724.1| SSU ribosomal protein S12P methylthiotransferase [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 440 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 25/116 (21%), Positives = 44/116 (37%), Gaps = 12/116 (10%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL- 155 +K+ C C +C + G+ + D + E E++ T D Sbjct: 148 AYIKIAEGCNNRCSYCSIPLIRGNYTSRYI--DDIIQEARKLSED-GYKEIVLTAQDTTK 204 Query: 156 ----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 I K L +L+ L I +++ +RF P+ I+ EL+ +K K V Sbjct: 205 YGIDIYQKKMLATLLQKLSEIDNIKWIRF----LYSYPEDIDDELLNIVKSLPKVV 256 >gi|291550415|emb|CBL26677.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruminococcus torques L2-14] Length = 482 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 23/132 (17%), Positives = 61/132 (46%), Gaps = 19/132 (14%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWE 146 + +YP + + ++ C +C +C + G ++ + ++ E +A + E Sbjct: 183 VERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSREPKAIIREIERLVA-----DGVVE 237 Query: 147 VIFTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 V+ G + + K L++ +L+ + I+ ++ +RF + P+ ++ ELI+ + Sbjct: 238 VMLLGQN-VNSYGKNLEEPMTFAQLLQEIEKIEGLERIRFMTSH----PKDLSDELIEVM 292 Query: 201 KEAGKPVYIAIH 212 ++ K + +H Sbjct: 293 SKS-KKICKHLH 303 >gi|120601419|ref|YP_965819.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4] gi|120561648|gb|ABM27392.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4] Length = 317 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 31/180 (17%), Positives = 56/180 (31%), Gaps = 20/180 (11%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWEVIF 149 +P R+ L+L + C C C R G D + AL I + +F Sbjct: 33 FPQRLQLELTNCCNNDCVMCPRH---GGHFTRKPKHMDLDLVRRALDEIAQHYNYQLQLF 89 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 G+PL+ R+ ++L L + S+ + P + L + + Sbjct: 90 HIGEPLLHP--RIFEILDMLEDYPTLGRKWISSKGQELTPDIMRRVLTSKVDYFNYSLLA 147 Query: 210 AIHANHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 A + + RLA+ L Q L+ + + E+ Sbjct: 148 MTPATYAR-IVPNGDYATVRGNLERLADLKRDLGVQRPYLR------AQMIEMDEALHEI 200 >gi|172060044|ref|YP_001807696.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria MC40-6] gi|171992561|gb|ACB63480.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria MC40-6] Length = 370 Score = 42.0 bits (98), Expect = 0.14, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%) Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118 P+ D + P + G+ H PD L + + C C +C F ++ Sbjct: 7 PLADVSGMPDISGVAHT-PDGALADRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKDYP 65 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 +L+ ++ E + ++ TGG+PL+ K L+ +++ L + Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116 >gi|331091338|ref|ZP_08340178.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium 2_1_46FAA] gi|330404499|gb|EGG84043.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium 2_1_46FAA] Length = 449 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 28/131 (21%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R LK+ C +C +C R + +K V++ A Y EV+ Sbjct: 162 HTRAYLKVQDGCNQFCTYCIIPYARGRVRSREKENVVAEVKQLVANGY-------QEVVL 214 Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 T G D L + L ++ + I+ ++ +R S ++P+ I E + + Sbjct: 215 TGIHLSSYGVD---LQGEDLLSLILAVNEIEGLKRIRLGS----LEPRIITEEFAKTISG 267 Query: 203 AGKPVYIAIHA 213 K I H Sbjct: 268 LEK---ICPHF 275 >gi|225424671|ref|XP_002262749.1| PREDICTED: hypothetical protein [Vitis vinifera] gi|296086557|emb|CBI32146.3| unnamed protein product [Vitis vinifera] Length = 439 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 39/188 (20%), Positives = 74/188 (39%), Gaps = 36/188 (19%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-----EKSQIWEVI 148 + + + C + C+FC+ M + +++ E A+ Y + E I V+ Sbjct: 179 RNTVCVSSQVGCAMNCQFCYTGRM--GLTRHLTAAEIVEQAV-YARRLFSSEVGSITNVV 235 Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 F G G+P ++ V+K + H Q L F R V + P+L L+E+ + Sbjct: 236 FMGMGEPF----HNIESVIKAADIMVHDQGLHFSPRKVTVSTSGLVPQLKHFLRESNCAL 291 Query: 208 YIAIHANHPYEFSEEAIAAISRL-ANAGIILLSQS-----------------VLLKGIND 249 ++++A ++E + + + LL Q+ V+L G+ND Sbjct: 292 AVSLNAT-----TDEVRNWVMPINRKYNLSLLLQTLREELRSKHNYKVLFEYVMLAGVND 346 Query: 250 DPEILANL 257 E L Sbjct: 347 SLEDARRL 354 >gi|209521138|ref|ZP_03269865.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. H160] gi|209498413|gb|EDZ98541.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. H160] Length = 382 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + +LS ++ E + ++ TGG+ Sbjct: 54 ISVTDRCNFRCVYCMPRAVFDKDYAFLPHSALLSFEEIERLAQLFVAH-GVEKIRLTGGE 112 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K L+ +++ L + Sbjct: 113 PLL--RKNLEFLIERLARL 129 >gi|282853150|ref|ZP_06262487.1| radical SAM domain protein [Propionibacterium acnes J139] gi|282582603|gb|EFB87983.1| radical SAM domain protein [Propionibacterium acnes J139] Length = 364 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 31/157 (19%), Positives = 67/157 (42%), Gaps = 13/157 (8%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 RY ++L C + C +C+RR+ G + ++ + ++ + V G Sbjct: 4 RY---LVLWPTAACDLTCPYCYRRDRRGGRMPVEVADTALDLVAEDVRTTGRPAHVQLAG 60 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+P L ++ V K + I+ ++ + + R++ ++I LK V +++ Sbjct: 61 GEP-TLVPSLIEHVAKRVVEIRWEKV----TCGIQTNAARLDGDIIAMLKRHSVRVGVSV 115 Query: 212 HANHP-YEFSEEAIAA----ISRLANAGIILLSQSVL 243 P +E + + A + LA+A I + +VL Sbjct: 116 DGPPPVHEKTRGSAAQTFRGLLALAHADIPVRVTTVL 152 >gi|150021064|ref|YP_001306418.1| radical SAM domain-containing protein [Thermosipho melanesiensis BI429] gi|149793585|gb|ABR31033.1| Radical SAM domain protein [Thermosipho melanesiensis BI429] Length = 314 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 40/112 (35%), Gaps = 15/112 (13%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + C C FC + M G + + D + + E+ F GG Sbjct: 5 IFLPNAGCKNRCIFCNQYSMTG---EKMPTKSDILKIID---KYPIKNEIAFYGG---TF 55 Query: 158 SHKRLQKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + ++K ++ L +K + + +R +R P I E + LK+ Sbjct: 56 TGLSIKKQIEILESVKFLNLPIRISTR-----PDEITEENLHILKKYNVKTI 102 >gi|167752159|ref|ZP_02424286.1| hypothetical protein ALIPUT_00401 [Alistipes putredinis DSM 17216] gi|167660400|gb|EDS04530.1| hypothetical protein ALIPUT_00401 [Alistipes putredinis DSM 17216] Length = 433 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 13/141 (9%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C C +C G+ + ++ D I Q E++ TG Sbjct: 142 RTRAFLKVQDGCDYKCAYCTIHYARGASRNMPIA--DLVKEAEQIAAAGQ-REIVITGIN 198 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + +R +L+ L ++ ++ R S ++P + E+I + K Sbjct: 199 TGDFGRTTGERFIDLLRALNEVEGIERYRISS----IEPNLLTDEIIAFCASSPK---FQ 251 Query: 211 IHANHPYEFSEEAIAAISRLA 231 H + P + +++ A R Sbjct: 252 HHFHIPLQSGSDSVLARMRRR 272 >gi|160933141|ref|ZP_02080530.1| hypothetical protein CLOLEP_01984 [Clostridium leptum DSM 753] gi|156868215|gb|EDO61587.1| hypothetical protein CLOLEP_01984 [Clostridium leptum DSM 753] Length = 424 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 59/136 (43%), Gaps = 14/136 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAY-IQEKSQI-WEVIFTGGDP 154 LK+ C +C +C + G + + + E + ++E I + G D Sbjct: 129 LKIAEGCDNHCTYCAIPLIRGGYRSRKMEDILAEAEKLAQWGVKELMVIAQDTTRYGED- 187 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHA 213 + +L ++L L ++ ++ +R V P+RI EL++ + + K + Y+ + Sbjct: 188 -LYGEGKLPQLLTELCKVEGLRWIR----VLYCYPERITDELLEVMAKEDKILKYMDLPL 242 Query: 214 NHPYEFSEEAIAAISR 229 H S + + A++R Sbjct: 243 QH---CSRQVLRAMNR 255 >gi|302325942|gb|ADL25143.1| radical SAM domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 336 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 16/114 (14%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y + + C + C+ C++ G K L++ + + I + + +IF+GG Sbjct: 5 YGMIVSWMTTNKCNLTCKHCYQDA--GENKSAELTTDEALKLIDEIAK-AGFKIMIFSGG 61 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204 +P+ + L + LR F + + I +L LKEAG Sbjct: 62 EPMTRPD------IVELVAHARERGLRPVFGTNGTL-----ITHDLAFMLKEAG 104 >gi|227498447|ref|ZP_03928593.1| predicted protein [Acidaminococcus sp. D21] gi|226903905|gb|EEH89823.1| predicted protein [Acidaminococcus sp. D21] Length = 369 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 9/118 (7%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGG 152 + I L L + C + CR+C + +V ++ + E E + F GG Sbjct: 10 NTIFLMLGNGCNMNCRYCLQHPLVEKSLSGHVNPDVYRFIRQVVDENDDKTELGLHFYGG 69 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 +PLI +++++ L+ V+ +RF + I + + I E+++ V I+ Sbjct: 70 EPLI-YFPLMKEIIGKLKD---VKGIRFST---ISNGKAITDEMVELFNSLPLYVCIS 120 >gi|73541963|ref|YP_296483.1| molybdenum cofactor biosynthesis protein A [Ralstonia eutropha JMP134] gi|72119376|gb|AAZ61639.1| GTP cyclohydrolase subunit MoaA [Ralstonia eutropha JMP134] Length = 396 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 45/260 (17%), Positives = 83/260 (31%), Gaps = 55/260 (21%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + D R P E + P + D PL + + + C C Sbjct: 32 DLRDHRYRSMTPSIPETLVEPSGL---VADTRARPLHDLR--------ISVTDRCNFRCV 80 Query: 111 FCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 +C +E+ +LS ++ E + ++ TGG+PL+ K ++K+ Sbjct: 81 YCMPKEVFDKDYTFLPHSELLSFEEIERTARLFVS-LGVEKIRLTGGEPLL--RKNIEKL 137 Query: 166 LKTLRYIKHV--------------------QILR-FHSRVPIVDPQRINPELIQCLKEAG 204 ++ L I V Q LR R V I+ + + + Sbjct: 138 VEMLARIDTVSGKPLDLTLTTNASLLARKAQSLRDAGLRRVSVSLDAIDDVTFRRMNDVD 197 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 V +H E A+ + V+ +G ND + + R F Sbjct: 198 FAVADVLH-------GIETAQAVGL-----APIKVNMVVKRGTND--AEIVPMARHFRGS 243 Query: 265 RIKPYYLHHPDLAAGTSHFR 284 I Y+ D ++H++ Sbjct: 244 GIIVRYIEFMD-VGASNHWQ 262 >gi|256831301|ref|YP_003160028.1| Radical SAM domain-containing protein [Jonesia denitrificans DSM 20603] gi|256684832|gb|ACV07725.1| Radical SAM domain protein [Jonesia denitrificans DSM 20603] Length = 386 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 13/128 (10%) Query: 81 NNHSPLKGIVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 + H ++ + H DR + ++ C + C+ C R + + L+++ +A L Sbjct: 5 DEHRSVRRLHHDAGDRPMITIWEVTRACALVCQHC-RADAQHRRNPRELTTEQGKALLDN 63 Query: 138 IQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196 I + + V+ TGGDP L L H Q L P V P ++ P+ Sbjct: 64 IASFGKPFPIVVMTGGDPFERDD------LAELVAHGHAQGLHMAL-SPSVTP-KMTPQR 115 Query: 197 IQCLKEAG 204 ++ L+ AG Sbjct: 116 LRELRAAG 123 >gi|51244049|ref|YP_063933.1| hypothetical protein DP0197 [Desulfotalea psychrophila LSv54] gi|50875086|emb|CAG34926.1| hypothetical protein DP0197 [Desulfotalea psychrophila LSv54] Length = 312 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 39/178 (21%), Positives = 67/178 (37%), Gaps = 39/178 (21%) Query: 104 VCPVYCRFCFRRE---MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSH 159 VC + C +C + G +K V K E L Y + F+G G+P LS Sbjct: 27 VCSLDCIYCESGRTTVLTGERKEYVSHEKVKEELLDYFANNPDPDYITFSGSGEP-TLS- 84 Query: 160 KRLQKVLKTLRYI----KHVQ--ILRFHS--RVPIVDPQRINPELI---------QCLKE 202 ++ T+ +I +V+ +L + P V + + +L+ + Sbjct: 85 ---SRIGDTIEFIKAQKPNVKVAVLTNGTLFSNPAVRRELMGADLVIPSLDAATWDSFRR 141 Query: 203 AGKPVY---IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 +P+ + H F EE + + +L +L G+NDD E LA L Sbjct: 142 INRPLATLDLDTHIEGIRLFKEEFSGKMD------LEIL----ILPGVNDDEESLAAL 189 >gi|323486941|ref|ZP_08092256.1| hypothetical protein HMPREF9474_04007 [Clostridium symbiosum WAL-14163] gi|323399713|gb|EGA92096.1| hypothetical protein HMPREF9474_04007 [Clostridium symbiosum WAL-14163] Length = 503 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 60/129 (46%), Gaps = 15/129 (11%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +YP + + ++ C +C +C + G ++ + +D + + S + E++ Sbjct: 197 ERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSR--NPEDIIREIEALVA-SGVVEIML 253 Query: 150 TGGDPLILSHKRLQ------KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G + + K L+ ++L+ + I+ ++ +RF + P+ ++ ELI+ +K + Sbjct: 254 LGQN-VNSYGKNLEKPITFAELLQQIEQIEGLERIRFMTSH----PKDLSDELIEVMKHS 308 Query: 204 GKPVYIAIH 212 K + +H Sbjct: 309 RK-ICRHLH 316 >gi|269126500|ref|YP_003299870.1| molybdenum cofactor biosynthesis protein A [Thermomonospora curvata DSM 43183] gi|268311458|gb|ACY97832.1| molybdenum cofactor biosynthesis protein A [Thermomonospora curvata DSM 43183] Length = 329 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 48/249 (19%), Positives = 93/249 (37%), Gaps = 45/249 (18%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C E + K +L+ + +A + I EV +TGG+PL+ Sbjct: 15 VSLTDRCNLRCTYCMPPEGLPWLPKPQLLTDDEVVRLVAIGVRRLGITEVRYTGGEPLL- 73 Query: 158 SHKRLQKVLKT---LRYIKHVQILR--FHSRVPIVDPQ-------RINPELIQCLKEAGK 205 + L ++++ LR + + R P R+N L + Sbjct: 74 -RRGLVEIVRRTAELRPRPQISLTTNGIGLRRLA--PALAEAGLDRVNVSLDTLDAGLFR 130 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVEL 264 + H + +A + AG+ + +VL++G+ND + L+R +E Sbjct: 131 RLA------HRDRL-ADVLAGLEAAHRAGLHPVKVNAVLMRGVNDHEAV--PLLRFCLER 181 Query: 265 RIKPYYLHHPDLAAGTSH--FRLTIEEGQKIVASLKE---------KISGLCQP--FYIL 311 + + H R + ++I+A L + G P +++ Sbjct: 182 GYQ--LRFIEQMPLDAQHGWRRAQMVTAEEILAELSREFELTPEDPRTRGSA-PAETFLV 238 Query: 312 DLPGGYGKV 320 D GG G+V Sbjct: 239 D--GGPGRV 245 >gi|257466298|ref|ZP_05630609.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium gonidiaformans ATCC 25563] gi|315917455|ref|ZP_07913695.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium gonidiaformans ATCC 25563] gi|313691330|gb|EFS28165.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium gonidiaformans ATCC 25563] Length = 348 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 27/119 (22%), Positives = 55/119 (46%), Gaps = 13/119 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYIQEKS--QIWEVI 148 R+ + + CP +C FC ++++ G + + +D + Y++ EV Sbjct: 2 RHYNIPIFISHFGCPNHCVFCNQKKINGQETDIQV--EDIHRIVKEYLKTLPKKSEKEVA 59 Query: 149 FTGGDPLILSHKRLQKVLKTL-RYIKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG LS + ++ L+ L YI+ +Q +R +R P I ++++ L++ G Sbjct: 60 FFGGTFTGLSMELQREYLEALQEYIERGDIQGIRLSTR-----PDYIQKDILEQLRKYG 113 >gi|254518626|ref|ZP_05130682.1| molybdenum cofactor biosynthesis protein A [Clostridium sp. 7_2_43FAA] gi|226912375|gb|EEH97576.1| molybdenum cofactor biosynthesis protein A [Clostridium sp. 7_2_43FAA] Length = 323 Score = 42.0 bits (98), Expect = 0.15, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 72/162 (44%), Gaps = 19/162 (11%) Query: 99 LKLLHVCPVYCRFCFR-REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C + +K L++ + + K I +V FTGG+PL+ Sbjct: 14 ISLTDNCNLRCIYCMEEKNNTFLKKEDKLTNDEIYKIVCE-SAKLGIKKVRFTGGEPLVR 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213 + ++++ + I+ ++ + + + E ++ L +AG K V I++ + Sbjct: 73 KD--IVELMQRINTIQGIEEIYLTTNGI------LLEENVEILAKAGLKGVNISLDSLKK 124 Query: 214 NHPYEFSEE-----AIAAISRLANAGIILLSQSVLLKGINDD 250 + +AAI + + GI + +V+++ INDD Sbjct: 125 ETFKRLTRLGDLNKVLAAIDKCISLGIKVKLNTVMIEDINDD 166 >gi|323691989|ref|ZP_08106237.1| hypothetical protein HMPREF9475_01100 [Clostridium symbiosum WAL-14673] gi|323503912|gb|EGB19726.1| hypothetical protein HMPREF9475_01100 [Clostridium symbiosum WAL-14673] Length = 500 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 60/129 (46%), Gaps = 15/129 (11%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +YP + + ++ C +C +C + G ++ + +D + + S + E++ Sbjct: 194 ERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSR--NPEDIIREIEALVA-SGVVEIML 250 Query: 150 TGGDPLILSHKRLQ------KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G + + K L+ ++L+ + I+ ++ +RF + P+ ++ ELI+ +K + Sbjct: 251 LGQN-VNSYGKNLEKPITFAELLQQIEQIEGLERIRFMTSH----PKDLSDELIEVMKHS 305 Query: 204 GKPVYIAIH 212 K + +H Sbjct: 306 RK-ICRHLH 313 >gi|167769111|ref|ZP_02441164.1| hypothetical protein ANACOL_00434 [Anaerotruncus colihominis DSM 17241] gi|167668751|gb|EDS12881.1| hypothetical protein ANACOL_00434 [Anaerotruncus colihominis DSM 17241] Length = 441 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 30/159 (18%), Positives = 53/159 (33%), Gaps = 25/159 (15%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRIL--------LKLLHVCPVYCRFC----FRREMVG 119 E+ G+ L+G +R+L LK+ C C +C R Sbjct: 120 GEKTVAFGEKEALSLEG------ERVLANEPYFAYLKVAEGCDNRCSYCAIPLIRGPFRS 173 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +++ AA + + G D + L ++L+ L + V+ +R Sbjct: 174 RPMENIVAEAQRLAACGVTELNVVAQDTTRYGED--LYGRLALPELLEKLCRLDGVRWVR 231 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPY 217 + P RI L+ + K V Y+ I H Sbjct: 232 ----MLYCYPDRITDRLLDVMAREEKIVKYMDIPIQHVN 266 >gi|220927786|ref|YP_002504695.1| radical SAM protein [Clostridium cellulolyticum H10] gi|219998114|gb|ACL74715.1| Radical SAM domain protein [Clostridium cellulolyticum H10] Length = 468 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 20/94 (21%), Positives = 42/94 (44%), Gaps = 9/94 (9%) Query: 72 EEREDPIGDNN-HSPLKGIVHRYPDRI---LLKLLHVCPVYCRFCFRREMVGS--QKGTV 125 +D I + H K I H R+ +L++ C + C +C + G Sbjct: 57 GYLKDSILEEIVHPETKYIKHHLDHRVQFLILQVTQSCNLRCNYCTYSGNYTNRVHSGKS 116 Query: 126 LSSKDTEAALAYIQEK-SQIWEVIFT--GGDPLI 156 +S + + ++ Y+ + ++I +V + GG+PL+ Sbjct: 117 MSWELAKKSIDYLYDHSNEIEKVRISFYGGEPLL 150 >gi|325290900|ref|YP_004267081.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271] gi|324966301|gb|ADY57080.1| Radical SAM domain protein [Syntrophobotulus glycolicus DSM 8271] Length = 296 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 80/239 (33%), Gaps = 39/239 (16%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 H+Y RI L + C + C+FC R G + K E ++ +I Sbjct: 28 HKY-GRIHLPVSPRCNIQCKFCKRSLNKFENRPGVAGSILTPEKALEVVDKALELCPEIT 86 Query: 146 EVIFTG-GDPLILSHKRLQKV---------------LKTLRYIKHV-QILRFHSRVPIVD 188 V G GD L + L L ++V +I++ + V Sbjct: 87 VVGIAGPGDTL-ATPHALDTFQLVHEKYPDLIKCLSTNGLLLRENVNRIVKAGVKTVTVT 145 Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA----ISRLANAGIILLSQSVLL 244 ++PE LK ++ + E + + A I +++ GI++ +VL+ Sbjct: 146 VNAVDPE---ILKNICSYIFYNGQLINGKEAALWLLEAQLAGIKKISERGIVVKINTVLI 202 Query: 245 KGINDD--PEILANLMRTFVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 IN+ E+ + I P S FR+ E + E+ Sbjct: 203 PEINNGHVGEVARVTSAAGASTINIIP-----LIPQNEMSDFRVPNCEELNVEREAAER 256 >gi|257438968|ref|ZP_05614723.1| radical SAM domain protein [Faecalibacterium prausnitzii A2-165] gi|257198553|gb|EEU96837.1| radical SAM domain protein [Faecalibacterium prausnitzii A2-165] Length = 487 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 9/118 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C +CF + + ++S + + A+ ++ E S EV F GG+PL Sbjct: 107 LHVAHTCNLNCSYCFASQGRYQGERALMSFEVGKRAMDFLIENSGSRRNLEVDFFGGEPL 166 Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + K+L + I H + RF + I+ ++I + V +++ Sbjct: 167 MNFDMVKKLVAYCREQEKI-HNKNFRF---TMTTNGMLIDDDVIDFCNKECHNVVLSL 220 >gi|237741210|ref|ZP_04571691.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. 4_1_13] gi|256846346|ref|ZP_05551803.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. 3_1_36A2] gi|229430742|gb|EEO40954.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. 4_1_13] gi|256718115|gb|EEU31671.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. 3_1_36A2] Length = 348 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 15/124 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148 ++ + + CP C FC ++++ G + +S D + + Y++ I +V Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59 Query: 149 FTGGDPLI-LSHKRLQKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG +S ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G Sbjct: 60 FFGG-TFTGISMDLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113 Query: 205 KPVY 208 Sbjct: 114 VKTI 117 >gi|160942971|ref|ZP_02090209.1| hypothetical protein FAEPRAM212_00448 [Faecalibacterium prausnitzii M21/2] gi|158445665|gb|EDP22668.1| hypothetical protein FAEPRAM212_00448 [Faecalibacterium prausnitzii M21/2] Length = 431 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 18/119 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R +K+ C C +C G + + + A L + + EV+ + Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--AEESILAELHQLAA-AGYREVVLSAIS 197 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L ++++ + ++ +R S +DP + PE I L K Sbjct: 198 LPSYGLDTGT----NLVELVEKCAQVPGIERIRLGS----LDPDMLTPEFISRLAAVDK 248 >gi|116749020|ref|YP_845707.1| MiaB-like tRNA modifying enzyme YliG [Syntrophobacter fumaroxidans MPOB] gi|238066613|sp|A0LIM0|RIMO_SYNFM RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|116698084|gb|ABK17272.1| MiaB-like tRNA modifying enzyme YliG [Syntrophobacter fumaroxidans MPOB] Length = 444 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 10/118 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGT----VLSSKDTEAALAYIQEKSQIWEVIF 149 +K+ C C FC + G + +L A + + Sbjct: 146 RSSAYVKIAEGCGNRCAFCLIPRLRGPYRSRRAVDILREAHRLVACGAKELNIVAQDTTA 205 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 G D L +L++L I+ ++ +R P RI PELI+ + ++ K V Sbjct: 206 FGSD--RGEEHALVSLLESLEEIEKLEWVRL----LYAYPDRITPELIRTMSQSRKVV 257 >gi|34764314|ref|ZP_00145148.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27885914|gb|EAA23256.1| Coproporphyrinogen oxidase, anaerobic [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 320 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 15/124 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148 ++ + + CP C FC ++++ G + +S D + + Y++ I +V Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59 Query: 149 FTGGDPLI-LSHKRLQKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG +S ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G Sbjct: 60 FFGG-TFTGISMDLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113 Query: 205 KPVY 208 Sbjct: 114 VKTI 117 >gi|295103489|emb|CBL01033.1| MiaB-like tRNA modifying enzyme [Faecalibacterium prausnitzii SL3/3] Length = 431 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 42/119 (35%), Gaps = 18/119 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R +K+ C C +C G + + + A L + + EV+ + Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--AEESILAELHQLAA-AGYREVVLSAIS 197 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L ++++ + ++ +R S +DP + PE I L K Sbjct: 198 LPSYGLDTGT----NLVELVEKCAQVPGIERIRLGS----LDPDMLTPEFISRLAAVDK 248 >gi|237714068|ref|ZP_04544549.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. D1] gi|262407119|ref|ZP_06083668.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 2_1_22] gi|294644009|ref|ZP_06721789.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides ovatus SD CC 2a] gi|294810385|ref|ZP_06769043.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides xylanisolvens SD CC 1b] gi|229445892|gb|EEO51683.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. D1] gi|262355822|gb|EEZ04913.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. 2_1_22] gi|292640646|gb|EFF58884.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides ovatus SD CC 2a] gi|294442412|gb|EFG11221.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides xylanisolvens SD CC 1b] Length = 152 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 23/59 (38%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C +C C E G L+ + ++ + I+ + V F+GGDP L Sbjct: 25 GCSHHCPGCHNPESWNPGAGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEAFL 83 >gi|315058449|gb|ADT72778.1| MiaB family protein [Campylobacter jejuni subsp. jejuni S3] Length = 416 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 18/132 (13%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + +L + A Y E++ Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184 Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L + L K+L+ + I ++ +R S ++P +++ ++ L EA Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRLGS----LEPAQLDESFLEILDEAWLE 240 Query: 207 VYIAIHANHPYE 218 ++ I H E Sbjct: 241 RHLHIALQHTSE 252 >gi|289578146|ref|YP_003476773.1| radical SAM protein [Thermoanaerobacter italicus Ab9] gi|289527859|gb|ADD02211.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9] Length = 304 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 15/117 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 ++L + C + C +C+++ ++GS+ +L K + + + + VI GG+PL+ Sbjct: 9 IELTNRCNLDCIYCYKK-VIGSRNDDILPEKAIDIIVENLGSNPAVL-VILEGGEPLLHP 66 Query: 159 HKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + ++ +K V IL + + P+ I +L + + V I++ Sbjct: 67 -----RFIEIFYKLKEYSVAVDILTNGT---LFTPE-IVHDLAKIFSQKYDSVQISL 114 >gi|205356717|ref|ZP_03223478.1| hypothetical protein Cj8421_1025 [Campylobacter jejuni subsp. jejuni CG8421] gi|205345455|gb|EDZ32097.1| hypothetical protein Cj8421_1025 [Campylobacter jejuni subsp. jejuni CG8421] Length = 354 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 18/132 (13%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + +L + A Y E++ Sbjct: 70 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 122 Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L + L K+L+ + I ++ +R S ++P +++ ++ L EA Sbjct: 123 TGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRLGS----LEPAQLDESFLEILDEAWLE 178 Query: 207 VYIAIHANHPYE 218 ++ I H E Sbjct: 179 RHLHIALQHTSE 190 >gi|149914618|ref|ZP_01903148.1| arginyl-tRNA-protein transferase [Roseobacter sp. AzwK-3b] gi|149811411|gb|EDM71246.1| arginyl-tRNA-protein transferase [Roseobacter sp. AzwK-3b] Length = 317 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 61/158 (38%), Gaps = 20/158 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ----IWEVIF 149 P+ + +C + C C+ + + +++ + L Y+ + ++ I E+ F Sbjct: 34 PETLWFNTGTLCNITCANCYIESSPTNDRLVYITA---DEVLDYLDQITERGWPIREIGF 90 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 TGG+P ++ + + L V IL R P++ + L+ K + + Sbjct: 91 TGGEPF-MNPEMISMTRACLERGYEVLILTNAMR-PMMRKS-VKAGLLDLAKTWRDTLTL 147 Query: 210 AIHANHPYEFSEE----------AIAAISRLANAGIIL 237 I +H E + I + L +AGI + Sbjct: 148 RISVDHWSEVRHDEERGKDAFKRTIEGMCWLRDAGIRM 185 >gi|57237831|ref|YP_179079.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni RM1221] gi|88596372|ref|ZP_01099609.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni 84-25] gi|148926084|ref|ZP_01809770.1| hypothetical protein Cj8486_1074 [Campylobacter jejuni subsp. jejuni CG8486] gi|218562622|ref|YP_002344401.1| putative MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|57166635|gb|AAW35414.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni RM1221] gi|88191213|gb|EAQ95185.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni 84-25] gi|112360328|emb|CAL35124.1| putative MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|145845563|gb|EDK22655.1| hypothetical protein Cj8486_1074 [Campylobacter jejuni subsp. jejuni CG8486] gi|284926236|gb|ADC28588.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni IA3902] gi|315928365|gb|EFV07680.1| RNA modification enzyme, MiaB family protein [Campylobacter jejuni subsp. jejuni DFVF1099] Length = 416 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 52/132 (39%), Gaps = 18/132 (13%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + +L + A Y E++ Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184 Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L + L K+L+ + I ++ +R S ++P +++ ++ L EA Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRLGS----LEPAQLDESFLEILDEAWLE 240 Query: 207 VYIAIHANHPYE 218 ++ I H E Sbjct: 241 RHLHIALQHTSE 252 >gi|253582208|ref|ZP_04859431.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] gi|251835747|gb|EES64285.1| conserved hypothetical protein [Fusobacterium varium ATCC 27725] Length = 469 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 52/149 (34%), Gaps = 15/149 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + L+ ++ + +++ + G DP+ S Sbjct: 87 LYVSNYCVNNCEYCGYKHDNDELSRKKLNREELIEEVKSLEKLGHKRIALEAGEDPINCS 146 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE------------AGKP 206 L +L ++ I ++ R V+ E + LKE KP Sbjct: 147 ---LDYILDCIKDIYSIKFKNGSIRRINVNIAATTVENYKRLKEAEIGTYILFQETYHKP 203 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGI 235 Y +H N P E A+ R AGI Sbjct: 204 TYERVHLNGPKRDYEYHTTAMFRAREAGI 232 >gi|83721219|ref|YP_442241.1| molybdenum cofactor biosynthesis protein A [Burkholderia thailandensis E264] gi|167619209|ref|ZP_02387840.1| molybdenum cofactor biosynthesis protein A [Burkholderia thailandensis Bt4] gi|257138434|ref|ZP_05586696.1| molybdenum cofactor biosynthesis protein A [Burkholderia thailandensis E264] gi|83655044|gb|ABC39107.1| molybdenum cofactor biosynthesis protein A [Burkholderia thailandensis E264] Length = 370 Score = 41.6 bits (97), Expect = 0.16, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 8/82 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + G +L+ ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99 Query: 154 PLILSHKRLQKVLKTLRYIKHV 175 PL+ K ++ +++ L + V Sbjct: 100 PLL--RKNIEFLIERLAKMTTV 119 >gi|328954329|ref|YP_004371663.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109] gi|328454653|gb|AEB10482.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109] Length = 511 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 35/190 (18%), Positives = 72/190 (37%), Gaps = 29/190 (15%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 SP+ + RY + L + C + CR C+ +G L L QE Sbjct: 206 SPIPSL--RYLE---LMITERCNLRCRHCY----LGEVGEAELPLDAVLQTLQEFQEMQG 256 Query: 144 IWEVIFTGGDPLILS-HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + V+ +GG+PL+ + L L LRF V + + + ++I+ L+ Sbjct: 257 LR-VLLSGGEPLMHRHWQELNNHLPEFE-------LRF---VLLSNGLLLTDKVIEALRV 305 Query: 203 AGKPVYI-AIHANHPYEFSE----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 + + + H + + + L +AG + +++ +G + LA + Sbjct: 306 HEVQLSLDGLEPGHDLLRGPGTWKKTVDRMQALQSAGFEVSVATMIHRG---NVAELAEM 362 Query: 258 MRTFVELRIK 267 R + ++ Sbjct: 363 SRWLQQAEVR 372 >gi|160873411|ref|YP_001552727.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica OS195] gi|160858933|gb|ABX47467.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica OS195] gi|315265640|gb|ADT92493.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica OS678] Length = 337 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + VC C +C K LS + E ++ + ++ TGG+P + Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217 +++ + R H+ + R+ + + + +++ + P Sbjct: 87 D--FTDIIRVVADNP-----RIHTIATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139 Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249 + + E + I +AG + +VLLKG+ND Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179 >gi|306821073|ref|ZP_07454691.1| MiaB family tRNA modification enzyme [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550909|gb|EFM38882.1| MiaB family tRNA modification enzyme [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 452 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 38/147 (25%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT 150 R +K+ C YC +C + + S++ + +Q + EV+ T Sbjct: 142 KNTRAFVKIQDGCDRYCSYC-----IIPYTRGRIRSRNIGDIVKEVQSLSDNGYKEVVLT 196 Query: 151 G------------------------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 G D I L V++ + IK + +R S Sbjct: 197 GIHIASYGKDLKKSKDKLIPIIHSQKDDFIQEDISLIDVIEEVSKIKDIHRVRIGS---- 252 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHA 213 V+P I+ + +Q L + K H Sbjct: 253 VEPIIISDDFLQRLTKIEK---FCPHF 276 >gi|325681387|ref|ZP_08160913.1| ribosomal protein S12 methylthiotransferase RimO [Ruminococcus albus 8] gi|324106877|gb|EGC01167.1| ribosomal protein S12 methylthiotransferase RimO [Ruminococcus albus 8] Length = 443 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 60/160 (37%), Gaps = 20/160 (12%) Query: 79 GDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 G P++G I+ P +K+ C C +C + G K +D Sbjct: 128 GSKTDLPMEGGRIISTEPFYAYIKIAEGCSNNCTYCAIPAIRG--KFRSRKMEDILEEAR 185 Query: 137 YIQEKSQIWEVIFT------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 ++ E V+ G D I +L ++L+ L I + +R P+ Sbjct: 186 WLAENGVTELVVIAQDTTRYGED--IYGKSKLPELLRELCKIDGFKWIR----TLYSYPE 239 Query: 191 RINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISR 229 RI+ E I L K V YI + H + + + +++R Sbjct: 240 RISEEFIDVLASEEKLVKYIDMPIQH---CNGDVLRSMNR 276 >gi|113868543|ref|YP_727032.1| molybdenum cofactor biosynthesis protein A [Ralstonia eutropha H16] gi|113527319|emb|CAJ93664.1| molybdopterin biosynthesis protein [Ralstonia eutropha H16] Length = 374 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 48/214 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ +LS ++ E + ++ TGG+ Sbjct: 47 ISVTDRCNFRCVYCMPKEVFDKDYTFLPHSELLSFEEIERTARLFVAH-GVEKIRLTGGE 105 Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191 PL+ K ++ +++ L I+ V + LR +RV + Sbjct: 106 PLL--RKNIEHLVEMLAKIETVSGKPLDLTLTTNASLLARKARALRDAGLTRVSVSL-DA 162 Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 I+ + + + V +H E A+ + V+ +G ND Sbjct: 163 IDDATFRRMNDVDFAVADVLH-------GIETAQAVGL-----APIKVNMVVKRGTND-- 208 Query: 252 EILANLMRTFVELRIKPYYLHHP-DLAAGTSHFR 284 + + + R F I ++H++ Sbjct: 209 QEIVPMARHFRNSGII--LRFIEFMDVGASNHWQ 240 >gi|91774113|ref|YP_566805.1| molybdenum cofactor biosynthesis protein A [Methanococcoides burtonii DSM 6242] gi|91713128|gb|ABE53055.1| Molybdenum cofactor biosynthesis protein A [Methanococcoides burtonii DSM 6242] Length = 318 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 38/176 (21%), Positives = 68/176 (38%), Gaps = 31/176 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + + C + C +C G + S T + + K + +V F+GG+PL+ Sbjct: 21 ISITNRCNLDCIYC---HSEGDEGSRKEMSAKTISVIVSAAAKFGVNKVKFSGGEPLVRK 77 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK------------- 205 + +L+ L +K V + + +R LKEAG Sbjct: 78 D--FEDILRKLPKLKDVSVTTNG----VFLKERAFS-----LKEAGLDRVNVSLDTLDPE 126 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIN-DDPEILANLMR 259 H + E + + I +AG+ + VLLKGIN D+ + +L+R Sbjct: 127 KYAYITHGS--PETLHKVLEGIDAAISAGLTPVKLNMVLLKGINEDEIGDMLDLVR 180 >gi|310658985|ref|YP_003936706.1| hypothetical protein CLOST_1681 [Clostridium sticklandii DSM 519] gi|308825763|emb|CBH21801.1| conserved protein of unknown function [Clostridium sticklandii] Length = 442 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 15/146 (10%) Query: 66 ELNILPEEREDPIGD-NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 EL D D S + +Y LK+ C C +C ++ G + Sbjct: 118 ELGENNSLILDINHDLKPDSKRSLLTEKY--TAFLKIAEGCDNLCTYCIIPKLRGKYRSR 175 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGD----PL-ILSHKRLQKVLKTLRYIKHVQILR 179 L +D + S + E+I D L I + K L ++L+ L I+ + +R Sbjct: 176 KL--EDIVKEAKVLAA-SGVKEIIVIAQDTTKYGLDIYNEKSLPRLLRELNAIEDLNWIR 232 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGK 205 F P+ I+ +LI +KE+ K Sbjct: 233 F----LYSYPEDIDLDLILTVKESDK 254 >gi|300869794|ref|YP_003784665.1| molybdenum cofactor biosynthesis protein A [Brachyspira pilosicoli 95/1000] gi|300687493|gb|ADK30164.1| molybdenum cofactor biosynthesis protein A [Brachyspira pilosicoli 95/1000] Length = 265 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 12/109 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDPLI 156 + + C + C +C E G +K T E ++E ++ + +V TGG+PL+ Sbjct: 14 VSVTDRCNLRCVYCMPEE--GIEKKTHNEILSYEQIYNVVKESAELGVKKVRLTGGEPLV 71 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 K + +++ +R +K+++ + + I+ P + + LK+AG Sbjct: 72 --RKNIDELVAMIRTLKNIETIAMTTNALILSP------IAERLKKAGL 112 >gi|297200519|ref|ZP_06917916.1| radical SAM domain-containing protein [Streptomyces sviceus ATCC 29083] gi|297147672|gb|EFH28704.1| radical SAM domain-containing protein [Streptomyces sviceus ATCC 29083] Length = 401 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 59/158 (37%), Gaps = 31/158 (19%) Query: 98 LLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIW-----EVIF 149 LLK+ C + C +C+ E V + ++ A A I E ++ +V+ Sbjct: 8 LLKIHSRCNLACDYCYVYESVDQSWRDRPRTMAPGVVRRAAALIAEHAREHALSEVQVVL 67 Query: 150 TGGDPLILSHKRLQKVLKTLR-YIKHVQILRF-----HSRVPIVDPQRINPELIQCLKEA 203 GG+PL++ +RL VL+ L + V LR R+ +P L+ L Sbjct: 68 HGGEPLLVGAERLDAVLRELAGALDGVAELRLNLQTNGLRLVE------DPALLPVLARH 121 Query: 204 GKPVYI------AIHANHPYE-----FSEEAIAAISRL 230 G V + A H H + A+ L Sbjct: 122 GVRVGVSLDGTPATHDRHRRRPGGSGSHADVARALRLL 159 >gi|210612282|ref|ZP_03289230.1| hypothetical protein CLONEX_01431 [Clostridium nexile DSM 1787] gi|210151656|gb|EEA82663.1| hypothetical protein CLONEX_01431 [Clostridium nexile DSM 1787] Length = 440 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 12/114 (10%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQI----WEVIFTG 151 LK+ C +C +C + +V + + A + + +I E G Sbjct: 146 AYLKIAEGCDKHCTYCII-PKIRGNFRSVPIERLLKEAEDLVAQGVKEIILVAQETTLYG 204 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D + K L K+L+ L I ++ +R P+ I ELIQ +KE K Sbjct: 205 KD--LYGEKSLHKLLRELCKISGLRWIRI----LYCYPEEITDELIQVIKEEDK 252 >gi|218283069|ref|ZP_03489164.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989] gi|218216138|gb|EEC89676.1| hypothetical protein EUBIFOR_01750 [Eubacterium biforme DSM 3989] Length = 464 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 27/141 (19%), Positives = 63/141 (44%), Gaps = 13/141 (9%) Query: 80 DNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 ++ + P+ G + ++ L + H C + C +CF + ++S + + AL Sbjct: 78 EDTYEPMAGQLKAKTSGVIKALCLHIAHTCNLNCSYCFASQGKYHGDRALMSFETGKRAL 137 Query: 136 AYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQ 190 ++ E S EV F GG+PL ++ +++++ R I+ + RF + Sbjct: 138 DFLVENSGTRRNLEVDFFGGEPL-MNFDVVKQLVAYARSIEKEAGKNFRF---TLTTNGM 193 Query: 191 RINPELIQCLKEAGKPVYIAI 211 I+ ++I+ + V +++ Sbjct: 194 LIDDDVIEFANKEMSNVVLSL 214 >gi|319424662|gb|ADV52736.1| molybdenum cofactor biosynthesis protein A [Shewanella putrefaciens 200] Length = 337 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + VC C +C K LS + E ++ + ++ TGG+P + Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217 +++ + R H+ + R+ + + + +++ + P Sbjct: 87 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139 Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249 + + E + I +AG + +VLLKG+ND Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179 >gi|325289811|ref|YP_004265992.1| protein of unknown function DUF512 [Syntrophobotulus glycolicus DSM 8271] gi|324965212|gb|ADY55991.1| protein of unknown function DUF512 [Syntrophobotulus glycolicus DSM 8271] Length = 445 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 47/227 (20%), Positives = 74/227 (32%), Gaps = 82/227 (36%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C C FCF R+M + ++ D Y + T G + LS+ Sbjct: 91 RCRNNCVFCFVRQMPQGLRKSLYDKDD-----DY--------RLSVTQGSYITLSN---- 133 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP------- 216 L ++ILR H P+Y+++HA +P Sbjct: 134 -----LTEKDFLRILRLHIS----------------------PLYLSVHAWNPAARKKLM 166 Query: 217 -YEFSEEAIAAISRLANAGIILLSQSVLLKGIN------DDPEILANLMRTFVELRIKPY 269 + I RL I L +Q VL+ G N D LA L + + + P Sbjct: 167 KNSRAALLPEQIQRLVEGRITLHTQIVLVPGYNDGEILWDTVNHLAELYPSVQSVGVVP- 225 Query: 270 YLHHPDLAAGTSHFR--LT-------------IEEGQKIVASLKEKI 301 G + FR L +EEG K+ +L+++ Sbjct: 226 --------VGLTKFREGLPLLRTVTRKEAEMILEEGTKLQETLRQRT 264 >gi|323483386|ref|ZP_08088774.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14163] gi|323691115|ref|ZP_08105395.1| radical SAM domain-containing protein [Clostridium symbiosum WAL-14673] gi|323403240|gb|EGA95550.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14163] gi|323504812|gb|EGB20594.1| radical SAM domain-containing protein [Clostridium symbiosum WAL-14673] Length = 291 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 27/168 (16%) Query: 87 KGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDT----EAALAYI 138 +G+V+R P ++++ C C FC M ++ V ++ + A Sbjct: 4 EGVVYRPPSEARSLIVQVTIGCAHNTCTFC---NMYKDKQFRVRKMEEIMADLQEAHDAY 60 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQIL-RFHSRVPIVDPQRINPEL 196 + +V GD LI+ + L +L ++ + V + + + I+ R + E Sbjct: 61 AAY--VQKVFLADGDALIMKTEDLLTILAAVKELFPRVTRVAAYGTAQDIL---RKSEEE 115 Query: 197 IQCLKEAGKPVYIA---------IHANHPYEFSEEAIAAISRLANAGI 235 ++ LKEAG + + H + E IAA +L GI Sbjct: 116 LRLLKEAGLGIVYVGAETGDDEILEYIHKGVTAGEVIAAGQKLKRCGI 163 >gi|138896073|ref|YP_001126526.1| Fe-S oxidoreductase [Geobacillus thermodenitrificans NG80-2] gi|196248967|ref|ZP_03147667.1| RNA modification enzyme, MiaB family [Geobacillus sp. G11MC16] gi|134267586|gb|ABO67781.1| Fe-S oxidoreductase [Geobacillus thermodenitrificans NG80-2] gi|196211843|gb|EDY06602.1| RNA modification enzyme, MiaB family [Geobacillus sp. G11MC16] Length = 449 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 46/128 (35%), Gaps = 19/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C FC G + + + A + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPQEIIRQARQLVAA--GYKEIVLTGIH 198 Query: 151 ----GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L +L+ L + ++ +R S ++ ++ E+I L+ + K Sbjct: 199 TGGYGTD---LKDYNFAALLRDLDEQVPGLKRIRISS----IEASQLTDEVIDVLRRSDK 251 Query: 206 PVYIAIHA 213 + +H Sbjct: 252 -IVRHLHI 258 >gi|323483779|ref|ZP_08089159.1| hypothetical protein HMPREF9474_00908 [Clostridium symbiosum WAL-14163] gi|323402970|gb|EGA95288.1| hypothetical protein HMPREF9474_00908 [Clostridium symbiosum WAL-14163] Length = 436 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 27/135 (20%), Positives = 49/135 (36%), Gaps = 29/135 (21%) Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R +K+ C +C +C R + G V+ + AA Y E++ Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRAIGDVVKEVEGLAAAGY-------KEIVL 194 Query: 150 TGGDPLILS----------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 TG LS + L ++ L I+ ++ +R S ++P+ I E + Sbjct: 195 TGI---HLSSYGVDFPEEKRENLLSLITCLDKIQGIERIRLGS----LEPRIITEEFVSA 247 Query: 200 LKEAGKPVYIAIHAN 214 L K + H + Sbjct: 248 LAGL-KSICPHFHLS 261 >gi|313888496|ref|ZP_07822163.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845525|gb|EFR32919.1| radical SAM protein, TIGR01212 family [Peptoniphilus harei ACS-146-V-Sch2b] Length = 349 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 48/120 (40%), Gaps = 19/120 (15%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPL 155 + + CP C FC +R++ G S + + L Y+ ++ EV F GG Sbjct: 9 IFIPHYGCPNDCVFCNQRKITGMSTDISNSDVE-DTILEYLSYFKRKDNVEVAFYGG--- 64 Query: 156 ILSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + L++ + H V+ +R +R P I+ +++ LK+ G + Sbjct: 65 SFTAIPLEE-QSEFLKVAHSYKEKGLVKYIRLSTR-----PDAIDDRILENLKKYGVDII 118 >gi|15644072|ref|NP_229121.1| astB/chuR-related protein [Thermotoga maritima MSB8] gi|148270594|ref|YP_001245054.1| radical SAM domain-containing protein [Thermotoga petrophila RKU-1] gi|157364077|ref|YP_001470844.1| radical SAM domain-containing protein [Thermotoga lettingae TMO] gi|170289295|ref|YP_001739533.1| radical SAM domain-containing protein [Thermotoga sp. RQ2] gi|222100244|ref|YP_002534812.1| Radical SAM domain protein [Thermotoga neapolitana DSM 4359] gi|281412902|ref|YP_003346981.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10] gi|4981877|gb|AAD36391.1|AE001786_4 astB/chuR-related protein [Thermotoga maritima MSB8] gi|147736138|gb|ABQ47478.1| Radical SAM domain protein [Thermotoga petrophila RKU-1] gi|157314681|gb|ABV33780.1| Radical SAM domain protein [Thermotoga lettingae TMO] gi|170176798|gb|ACB09850.1| Radical SAM domain protein [Thermotoga sp. RQ2] gi|221572634|gb|ACM23446.1| Radical SAM domain protein [Thermotoga neapolitana DSM 4359] gi|281374005|gb|ADA67567.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10] Length = 463 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 30/195 (15%), Positives = 67/195 (34%), Gaps = 30/195 (15%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R+ L + VC + CR+C+ G + L + + + GG+PL Sbjct: 83 RLALNVSQVCRLKCRYCYANAGTYGNPG-FMKRNVLVRTLDFFLSNYNVHNIHIFGGEPL 141 Query: 156 ILSHKRLQKVLKTLRY-----IKHVQILRFHSRVPIVD-----PQRINPELIQCLKEAGK 205 L+ + ++++ + L +++ + + + + + +I Sbjct: 142 -LNIEMIEEMFRILTSKYAKKFNNLR-ITVATSLFVSEETINRFIKIYESYKDKF----- 194 Query: 206 PVYIAIHANHPYEFSEEAIAAIS------RLANAGIILLSQSVLLKGINDDPE-ILANLM 258 +Y+ + + P E + ++ I LL Q KG + E L Sbjct: 195 QIYMVVSLDGPKEIQDNTRPSLDSKSSSFDRIKNNINLLKQ----KGFSISFEVTYTKLH 250 Query: 259 RTFVELRIKPY-YLH 272 + +K Y Y + Sbjct: 251 KQLGWNILKIYKYFY 265 >gi|87307866|ref|ZP_01090009.1| astB/chuR-related protein [Blastopirellula marina DSM 3645] gi|87289480|gb|EAQ81371.1| astB/chuR-related protein [Blastopirellula marina DSM 3645] Length = 355 Score = 41.6 bits (97), Expect = 0.17, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 66/191 (34%), Gaps = 39/191 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + H C + C +C+ E + K + A+ ++ + E+ F GG+PLI Sbjct: 9 LVVNHACNLRCTYCYTGEKIRRPMSPETGRKAIDRAIRSVRRDGTL-ELSFFGGEPLI-E 66 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRV-------------PIVDPQRINPELIQCLKEAGK 205 + + +++ R Q +R + + PQ L + G Sbjct: 67 AELILDLVRYARSAADEQDVRLALSMTTNGTIESAAAWSVMTLPQ-----LELAISHDGL 121 Query: 206 PVYIAIHANHPYEFSEE-----AIAAISRLANAG----IILLSQSVLLKGINDDPEILAN 256 P + H H ++RL +AG I+++ Q D L + Sbjct: 122 P---SAHDGHRVTVDGLPSSFRVQNTMARLIDAGKEFRIVMVVQP-------DSVASLPD 171 Query: 257 LMRTFVELRIK 267 M L ++ Sbjct: 172 GMEFLYTLGVR 182 >gi|224368605|ref|YP_002602768.1| HemN1 [Desulfobacterium autotrophicum HRM2] gi|223691321|gb|ACN14604.1| HemN1 [Desulfobacterium autotrophicum HRM2] Length = 291 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 59/162 (36%), Gaps = 35/162 (21%) Query: 95 DRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGG 152 + +LL++ C C FC M K ++ S + E L + + V G Sbjct: 15 NSLLLQVTVGCTHNKCTFCT---MYKDTKFSIESLEQIEEDLKEARALYGDVKRVFLVNG 71 Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILR-------FHSRVPIVDPQRINPELIQCLKEAG 204 D +LS RL+ ++K + V+++ S+ + ++ L++ Sbjct: 72 DAFVLSANRLKPIVKLIIQYFPDVKVITMYASINNIKSK---------TDQELEELRDLR 122 Query: 205 -KPVYIAIHANHPYEFSEE----------AIAAISRLANAGI 235 ++I H E + E + + RL AGI Sbjct: 123 INDLWIGTETGH--EETLEYMNKGFSLKDSYEQLERLNKAGI 162 >gi|332877549|ref|ZP_08445296.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332684655|gb|EGJ57505.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 447 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 41/190 (21%), Positives = 71/190 (37%), Gaps = 32/190 (16%) Query: 56 IARQFIPQKEELNILPEERE--DPIGDNNHSPLKGIVHRY--------PDRILLKLLHVC 105 I R +E L +LP ER+ D + P K I H + R LK+ C Sbjct: 113 ILRY---LEERLPLLPAERKLADAEHEAYTVPTKDI-HTFVPSCSCGDRTRYFLKVQDGC 168 Query: 106 PVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG---GDPLILSHK 160 YC +C G + ++S + E A E++ TG GD + + Sbjct: 169 DYYCTYCTIPYARGRSRNGSIASLVRQAEQA-----ASEGGREIVLTGVNIGDFGKTTGE 223 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEF 219 ++K L ++ + R S ++P + E++ E+ H + P Sbjct: 224 SFLDLVKALDRVEGIARYRISS----IEPNLLTEEVLAYCAESR---AFMPHFHIPLQSG 276 Query: 220 SEEAIAAISR 229 S+E + + R Sbjct: 277 SDEVLKLMRR 286 >gi|312880310|ref|ZP_07740110.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Aminomonas paucivorans DSM 12260] gi|310783601|gb|EFQ23999.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Aminomonas paucivorans DSM 12260] Length = 446 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 44/122 (36%), Gaps = 26/122 (21%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151 R + + H C +C +C + S+D EA L ++ + E+ G Sbjct: 147 RAYVTIAHGCDHFCAYC-----IVPYVRGRFQSRDPEAILREVRCLADRGVREITLLGQN 201 Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 D ++L+ + + V +R+ + P+ + EL++ + E Sbjct: 202 VNRFGVDRSDGFSFP-----RLLREVAEVPGVLRVRYATSHPVD----FSEELVRVMAEH 252 Query: 204 GK 205 + Sbjct: 253 PR 254 >gi|300853988|ref|YP_003778972.1| putative oxidoreductase [Clostridium ljungdahlii DSM 13528] gi|300434103|gb|ADK13870.1| predicted oxidoreductase [Clostridium ljungdahlii DSM 13528] Length = 463 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 22/129 (17%), Positives = 48/129 (37%), Gaps = 19/129 (14%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF 149 + R LK+ C +C +C + SK + + ++ ++ E+I Sbjct: 164 QKRTRAFLKIQDGCNRFCSYC-----AIPFARGAVCSKSPDKIIEEVEKLSRNNFKEIIL 218 Query: 150 TGGDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 +G L ++L+ + +K + +R S +DPQ +I+ + + Sbjct: 219 SGIHIASYGTDIDGDWNLLRILQEIDKVKGIDRVRIGS----IDPQFFTEGVIEKMSKLE 274 Query: 205 KPVYIAIHA 213 K + H Sbjct: 275 K---LCPHF 280 >gi|167581126|ref|ZP_02374000.1| molybdenum cofactor biosynthesis protein A [Burkholderia thailandensis TXDOH] Length = 370 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 15/82 (18%), Positives = 34/82 (41%), Gaps = 8/82 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + G +L+ ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99 Query: 154 PLILSHKRLQKVLKTLRYIKHV 175 PL+ K ++ +++ L + V Sbjct: 100 PLL--RKNIEFLIERLAKMTTV 119 >gi|194366021|ref|YP_002028631.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas maltophilia R551-3] gi|226707388|sp|B4SL67|MOAA_STRM5 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|194348825|gb|ACF51948.1| molybdenum cofactor biosynthesis protein A [Stenotrophomonas maltophilia R551-3] Length = 326 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 28/175 (16%), Positives = 60/175 (34%), Gaps = 13/175 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L L C C +C + L + + + ++ TGG+P + Sbjct: 17 LSLTEACNFRCSYCLPDGYQVDGRPRFLQVDEIARLVRAFAA-LGMSKIRLTGGEPSLRK 75 Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHA 213 L +++ T+ ++ + + +P P R + ++ + Sbjct: 76 D--LDEIIATVAAAPGIRKVAITTNGTLLPRRLPGWHRAGLTALNVSMDSLQRERFRTIT 133 Query: 214 NHPYEFSEEAIAAISRLANAGII-LLSQSVLLKGINDD--PEILANLMRTFVELR 265 H E ++ G+ + +VLL+G+NDD P+ + L +R Sbjct: 134 GHDR--LPEIEQGLALAQALGLPAIKLNAVLLRGLNDDELPQWMDYLRDRPFSVR 186 >gi|262041408|ref|ZP_06014612.1| arylsulfatase-activating protein AtsB [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259041262|gb|EEW42329.1| arylsulfatase-activating protein AtsB [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 395 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 46/232 (19%), Positives = 84/232 (36%), Gaps = 34/232 (14%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135 P+ SP+ + P + C + CR+C+ +K + E + Sbjct: 13 PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDEKPVNKMDDARLEQFI 63 Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189 YI + +I ++ GG+PL+ +K L RY + S + Sbjct: 64 RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119 Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242 IN + +E G + +++ N + + S + A GI LL Q V Sbjct: 120 TLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVDFN 179 Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 LL + N+ A + V L + Y P ++ G + + EG ++ Sbjct: 180 LLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225 >gi|229102501|ref|ZP_04233207.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28] gi|228680891|gb|EEL35062.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28] Length = 383 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 65/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 121 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H E + + AI L I + +V+ D + +A L+ Sbjct: 122 SLDGPTAEIHDHFRGTEESFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLKEMAMLIEE 181 Query: 261 F 261 Sbjct: 182 L 182 >gi|283797908|ref|ZP_06347061.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1] gi|291074375|gb|EFE11739.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium sp. M62/1] gi|295091886|emb|CBK77993.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Clostridium cf. saccharolyticum K10] Length = 483 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 66/152 (43%), Gaps = 20/152 (13%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + I + D I ++ S +YP + + ++ C +C +C + G ++ Sbjct: 167 MVIDIWKDTDKIVEDLPS-----ERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSRRP 221 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL------QKVLKTLRYIKHVQILRF 180 +D + + + EV+ G + + K L ++L+ + I+ ++ +RF Sbjct: 222 --EDIIKEIEGLVAD-GVVEVMLLGQN-VNSYGKNLPEPITFAELLRRVEQIEGLERIRF 277 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 + P+ ++ ELI+ ++++ K + +H Sbjct: 278 MTSH----PKDLSDELIEVMRDS-KKICRHLH 304 >gi|297619205|ref|YP_003707310.1| Radical SAM domain-containing protein [Methanococcus voltae A3] gi|297378182|gb|ADI36337.1| Radical SAM domain protein [Methanococcus voltae A3] Length = 327 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 43/79 (54%), Gaps = 7/79 (8%) Query: 92 RYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 +Y ++LKL + C + C++C+ ++ G + + + A+ Y+ ++ Sbjct: 2 KY---LILKLTNNCNLRCKYCYANLSSDLDGDISNRNMDFETAKKAIDYLLSIDNNLKIQ 58 Query: 149 FTGGDPLILSHKRLQKVLK 167 FTGG+PL L+ + L+K+++ Sbjct: 59 FTGGEPL-LNFELLKKIVE 76 >gi|238019340|ref|ZP_04599766.1| hypothetical protein VEIDISOL_01204 [Veillonella dispar ATCC 17748] gi|237864039|gb|EEP65329.1| hypothetical protein VEIDISOL_01204 [Veillonella dispar ATCC 17748] Length = 431 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 29/163 (17%) Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ ++ +N E G+ + R +K+ C YC FC Sbjct: 117 RQINAVRDIMNESNFEEMPLYGNESDKA----------RAFMKIQEGCNNYCAFC----- 161 Query: 118 VGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFTG---GDPLILSHKR--LQKVLKTL 169 + L S+ + + + E E++ TG G+ + R L V+K L Sbjct: 162 IIPYTRGKLKSRKVDDIVQEAKRLVEH-GFHEIVLTGIHLGNYGVELPGRPTLADVVKAL 220 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 I + +RF S ++ ++ EL++ L K V +H Sbjct: 221 LEIPDLYRIRFGS----IESVEVSDELVE-LMATNKRVCPHLH 258 >gi|229590703|ref|YP_002872822.1| putative radical SAM protein [Pseudomonas fluorescens SBW25] gi|229362569|emb|CAY49476.1| putative radical SAM protein [Pseudomonas fluorescens SBW25] Length = 500 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 21/97 (21%), Positives = 40/97 (41%), Gaps = 12/97 (12%) Query: 82 NHSPLKGIVHRYPDRI----------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 H P + +Y R L + C C++C LS D Sbjct: 80 RHDPFPEMAAQYRSRKDFLFQGPALHLFVVTLRCNHTCQYCQVSRAPLGGSNHDLSEADA 139 Query: 132 EAALAYI-QEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 +AA+ + + + V F GG+PL L+ +R++++++ Sbjct: 140 QAAVDRLFESNAPALTVEFQGGEPL-LAFERVRQIVE 175 >gi|168187897|ref|ZP_02622532.1| conserved hypothetical protein [Clostridium botulinum C str. Eklund] gi|169294251|gb|EDS76384.1| conserved hypothetical protein [Clostridium botulinum C str. Eklund] Length = 444 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 12/114 (10%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +++ C C +C ++ G + L A + E+I G D I Sbjct: 147 AYIRISEGCDNLCTYCIIPKIRGKYRSRSL-ESIINEAKE--LANMGVKELILVGQDTAI 203 Query: 157 LSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +L +LK L I+ ++ +R V P+ I ELI+ +K K Sbjct: 204 YGSDLYEENKLSTLLKELSNIEDIEWIR----VLYTYPEEITDELIEEIKNNDK 253 >gi|160903003|ref|YP_001568584.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95] gi|160360647|gb|ABX32261.1| Radical SAM domain protein [Petrotoga mobilis SJ95] Length = 455 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 13/123 (10%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKSQIWEVIFT 150 +L L C C +CF+ E + D+E + +I + + T Sbjct: 91 TFVLYLTLNCNFNCVYCFQGEE-NKNRNITFKKNDSELIVNFIKKKFDASDDEKLTLTLT 149 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+PL L +Q+++ L V R +R I + ++ E + ++ +++ Sbjct: 150 GGEPL-LKFPLIQEIVTKLES--QVGKNRLSTR-LISNGSLLDEEKCRFFEKHN---WVS 202 Query: 211 IHA 213 Sbjct: 203 TQI 205 >gi|124026938|ref|YP_001012258.1| Fe-S oxidoreductase - arylsulfatase regulator AslB [Hyperthermus butylicus DSM 5456] gi|123977632|gb|ABM79913.1| Fe-S oxidoreductase - arylsulfatase regulator AslB [Hyperthermus butylicus DSM 5456] Length = 415 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 38/224 (16%), Positives = 85/224 (37%), Gaps = 31/224 (13%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + + E P+ P + R P + + C + C+ C R + L Sbjct: 1 MKVGSEHSGYPLH--RTWPFE----RNPLLVFWETTKACMLACKHC-RASAILKSLPGEL 53 Query: 127 SSKDTEAALAYIQEKSQIWEVI-FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 ++++ + + Q + ++ TGGDPL+ S + ++ + + LR P Sbjct: 54 TTEEAYKLIDDVAAFGQPYPILVLTGGDPLLRSD--IWDIIAYAKG----KGLRLAV-AP 106 Query: 186 IVDPQRINPELIQCLKEAGKP-VYIAIHANHPYEFSEEAIA----------AISRLANAG 234 V P + + ++ L E G V I++ + P E + AI G Sbjct: 107 AVSPN-LTEDKVKKLAELGVDGVSISLDGSRP-EIHDGIRGTSGVFEKTLWAIKTFQEYG 164 Query: 235 IILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA 278 + + + +++ D+ LA++ ++L +K + + + Sbjct: 165 VRVQVNTAVMR---DNVHDLADIAALLLKLGVKVWEVFYLVPVG 205 >gi|120597074|ref|YP_961648.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. W3-18-1] gi|146291496|ref|YP_001181920.1| molybdenum cofactor biosynthesis protein A [Shewanella putrefaciens CN-32] gi|120557167|gb|ABM23094.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. W3-18-1] gi|145563186|gb|ABP74121.1| GTP cyclohydrolase subunit MoaA [Shewanella putrefaciens CN-32] Length = 337 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + VC C +C K LS + E ++ + ++ TGG+P + Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217 +++ + R H+ + R+ + + + +++ + P Sbjct: 87 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139 Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249 + + E + I +AG + +VLLKG+ND Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179 >gi|308172658|ref|YP_003919363.1| hypothetical protein BAMF_0767 [Bacillus amyloliquefaciens DSM 7] gi|307605522|emb|CBI41893.1| hypothetical protein yfkA1 [Bacillus amyloliquefaciens DSM 7] Length = 177 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 45/121 (37%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L + L ++E + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALP---IDLLLKRLEEIPLLRSISITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K +++ + L H + +R +IN L + + P +H + Sbjct: 90 LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIGRYERIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|256828649|ref|YP_003157377.1| nitrogenase cofactor biosynthesis protein NifB [Desulfomicrobium baculatum DSM 4028] gi|256577825|gb|ACU88961.1| nitrogenase cofactor biosynthesis protein NifB [Desulfomicrobium baculatum DSM 4028] Length = 418 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 45/264 (17%), Positives = 87/264 (32%), Gaps = 80/264 (30%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAY----IQEKSQIWEVI 148 R+ L + C + C +C R+ ++ ++S + A+ Y ++++ +I V Sbjct: 22 GRVHLPVAPGCNIQCNYCNRKYDCVNESRPGVTSAILPPDRAVEYLDEVLKKEPRITVVG 81 Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP----------IVDPQRINPELI 197 G GDP+ + +TL I+ R +++ P + P+ ++ Sbjct: 82 IAGPGDPM-------AEAKRTLETIE-----RINAKYPNMLYCLSSNGLALPEHVD---- 125 Query: 198 QCLKEAGKPVYIAIHAN-HPYEFSEEA----------------------------IAAIS 228 L E G H E + +I Sbjct: 126 -RLAELG-----VTHVTVTMNAVDPEIGAKIYSWVRVGKVVYRGVEGAKILLERQLESIR 179 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI---KPYYLHHPDLAAGTSHFRL 285 L GI + S+++ G+ND I + + I P LH Sbjct: 180 LLKAKGITVKVNSIIIPGVNDHHLIEVAKVAASLGADIQNLIP--LHPTADTPFAG---- 233 Query: 286 TIEE-GQKIVASLKEKISGLCQPF 308 +EE ++++ L+ K G P Sbjct: 234 -VEEPTKELIHELRAK-GGALVPQ 255 >gi|206559374|ref|YP_002230135.1| molybdenum cofactor biosynthesis protein A [Burkholderia cenocepacia J2315] gi|206561224|ref|YP_002231989.1| molybdenum cofactor biosynthesis protein A [Burkholderia cenocepacia J2315] gi|198035412|emb|CAR51288.1| molybdenum cofactor biosynthesis protein A 2 [Burkholderia cenocepacia J2315] gi|198037266|emb|CAR53188.1| molybdenum cofactor biosynthesis protein A 1 [Burkholderia cenocepacia J2315] Length = 370 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%) Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118 P+ D + P + G+ H PD L + + C C +C F ++ Sbjct: 7 PLADVSGMPDVSGVAHA-PDGTLADTFARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYP 65 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 +L+ ++ E + ++ TGG+PL+ K L+ +++ L + Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116 >gi|218246611|ref|YP_002371982.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC 8801] gi|257059654|ref|YP_003137542.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC 8802] gi|218167089|gb|ACK65826.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC 8801] gi|256589820|gb|ACV00707.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC 8802] Length = 491 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 76/230 (33%), Gaps = 63/230 (27%) Query: 59 QFI-PQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116 Q I P +E + P ED H Y R+ + + C + C +C R+ Sbjct: 41 QAIAPDIQERIAKHPCYSEDA------------HHHYA-RLHVAVAPACNIQCNYCNRKY 87 Query: 117 ------MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHK--------- 160 G + + AL + Q+ + G GDPL + Sbjct: 88 DCANESRPGVVSEVLTPEEAAHKALVIAGKIPQMTVLGIAGPGDPLANPEQTFRTFELVA 147 Query: 161 ---------------RLQKVLKTL--RYIKHVQILRFHSRVPIVDP---QRINPELIQCL 200 L + + I HV L + ++DP ++I P ++ Sbjct: 148 EKAPDIKLCLSSNGLMLPDYIDRIKELKIDHV-TLTIN----MIDPEIGEKIYP-WVRFN 201 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 ++ K + + H + ++ L A I+ SV++ GIND Sbjct: 202 RKRYKGLE-GVKILHERQM-----ESLDALREANILCKVNSVMIPGINDH 245 >gi|2183203|gb|AAC33370.1| nitrogenase [Cyanothece sp. PCC 8801] Length = 558 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 43/230 (18%), Positives = 76/230 (33%), Gaps = 63/230 (27%) Query: 59 QFI-PQKEE-LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116 Q I P +E + P ED H Y R+ + + C + C +C R+ Sbjct: 41 QAIAPDIQERIAKHPCYSEDA------------HHHYA-RLHVAVAPACNIQCNYCNRKY 87 Query: 117 ------MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHK--------- 160 G + + AL + Q+ + G GDPL + Sbjct: 88 DCANESRPGVVSEVLTPEEAAHKALVIAGKIPQMTVLGIAGPGDPLANPEQTFRTFELVA 147 Query: 161 ---------------RLQKVLKTL--RYIKHVQILRFHSRVPIVDP---QRINPELIQCL 200 L + + I HV L + ++DP ++I P ++ Sbjct: 148 EKAPDIKLCLSSNGLMLPDYIDRIKELKIDHV-TLTIN----MIDPEIGEKIYP-WVRFN 201 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 ++ K + + H + ++ L A I+ SV++ GIND Sbjct: 202 RKRYKGLE-GVKILHERQM-----ESLDALREANILCKVNSVMIPGINDH 245 >gi|317152988|ref|YP_004121036.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316943239|gb|ADU62290.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 315 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 33/173 (19%), Positives = 64/173 (36%), Gaps = 30/173 (17%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 + C + CR+C+ ++ + ++ LA + E ++ ++ GG+PL Sbjct: 18 ITTSCSLSCRYCYASHW---KEERHIDTERFLELLAEMDEM-GVFLLLLAGGEPLRHPD- 72 Query: 161 RLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPV---YIAIHANHP 216 ++L+ + V +L + P EL L E K + + + +HP Sbjct: 73 -FFRILEAAIQTRMSVSVLTNGTESP---------ELAVRLAECHKNIHPFVVQVSLDHP 122 Query: 217 YEF--------SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 E + I LA G+ +V+ +N D L +L F Sbjct: 123 SEAVNDRTRGKTASVRQFIHTLAENGLTPQIATVIT-TVNKDR--LGDLFHAF 172 >gi|260587677|ref|ZP_05853590.1| tRNA-I(6)A37 modification enzyme MiaB [Blautia hansenii DSM 20583] gi|260541942|gb|EEX22511.1| tRNA-I(6)A37 modification enzyme MiaB [Blautia hansenii DSM 20583] Length = 312 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 27/149 (18%), Positives = 65/149 (43%), Gaps = 19/149 (12%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 + + I + D I + P++ +YP + + ++ C +C +C + G ++ Sbjct: 175 LSDRMIIDIWKDTDKIVE--DLPVE---RKYPFKSGVNIMFGCNNFCSYCIVPYVRGRER 229 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQ 176 + KD + + + + EV+ G + + K L + +L + I+ ++ Sbjct: 230 SR--NPKDIVREIERLVKD-GVVEVMLLGQN-VNSYGKNLDEPMTFAQLLTEIEKIEGLK 285 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +RF + P+ ++ ELI+ +K + K Sbjct: 286 RIRFMTSH----PKDLSDELIEVMKNSKK 310 >gi|255321817|ref|ZP_05362967.1| molybdenum cofactor biosynthesis protein A [Campylobacter showae RM3277] gi|255300921|gb|EET80188.1| molybdenum cofactor biosynthesis protein A [Campylobacter showae RM3277] Length = 322 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 58/162 (35%), Gaps = 19/162 (11%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C C++C + + +LS ++ + + ++ TGG+PL+ Sbjct: 15 ISVTQRCNFRCKYCMPKTPFSWEPRENLLSFEEL-FLFVKVCLDEGVKKIRITGGEPLLR 73 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA------ 210 L K + + L + + + LK AG K + ++ Sbjct: 74 KD--LDKFIAMINEHSPDVDLAITTNGF------MLKHYAKALKNAGLKRINMSLDSLKT 125 Query: 211 --IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 E +A + AG+ + +V L+G+NDD Sbjct: 126 EKAKFLAQKSVLHEVLAGLDAALEAGLKVKLNTVALRGVNDD 167 >gi|226311189|ref|YP_002771083.1| menaquinone biosynthesis protein [Brevibacillus brevis NBRC 100599] gi|226094137|dbj|BAH42579.1| putative menaquinone biosynthesis protein [Brevibacillus brevis NBRC 100599] Length = 368 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 24/74 (32%), Positives = 30/74 (40%), Gaps = 8/74 (10%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159 +VC YCRFC GS +G VL E IQE + E++ GG Sbjct: 60 TNVCDTYCRFCAFYRPPGSSEGYVLPR---ETIFEKIQETVDVGGTEILMQGG---TNPD 113 Query: 160 KRLQKVLKTLRYIK 173 +L LR IK Sbjct: 114 LKLDYYTDLLRAIK 127 >gi|323463736|gb|ADX75889.1| molybdenum cofactor biosynthesis protein A [Staphylococcus pseudintermedius ED99] Length = 340 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G K +LS ++ + + + +V TGG+ Sbjct: 18 ISVTDRCNFRCDYCMPKEIFGDNYVFLPKNQLLSFEEIVRITK-LYAQLGVKKVRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ L +++ + I+ ++ + Sbjct: 77 PLLRRD--LHQLIAQITQIEGIEDI 99 >gi|253682144|ref|ZP_04862941.1| conserved hypothetical protein [Clostridium botulinum D str. 1873] gi|253561856|gb|EES91308.1| conserved hypothetical protein [Clostridium botulinum D str. 1873] Length = 433 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 23/129 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R LK+ C +C +C + SKD E + +++ S+ E+I +G Sbjct: 141 KTRAFLKIQDGCNNFCSYCLI-----PFARGAVCSKDPEIIIDEVKKLSEHGFKEIILSG 195 Query: 152 GDPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--QCLKEAG 204 D L +VLK + I+ + +R S I PE +KE G Sbjct: 196 IDIASYGVDLEGDWNLLRVLKAIDEIEGINRVRIGS---------IGPEFFNEDIIKEIG 246 Query: 205 KPVYIAIHA 213 + H Sbjct: 247 SLKKLCPHF 255 >gi|291297322|ref|YP_003508720.1| radical SAM enzyme, Cfr family [Meiothermus ruber DSM 1279] gi|290472281|gb|ADD29700.1| radical SAM enzyme, Cfr family [Meiothermus ruber DSM 1279] Length = 342 Score = 41.6 bits (97), Expect = 0.18, Method: Composition-based stats. Identities = 48/209 (22%), Positives = 77/209 (36%), Gaps = 48/209 (22%) Query: 93 YPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL--AYIQEK--SQIWE 146 Y +R + + + CP C FC M + +++ + L AY Q+ +I Sbjct: 95 YLNRKTICISSMVGCPAGCTFCATGRM--GFGRNLTAAEMLDQVLFAAYHQQHAPREIRN 152 Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC------ 199 V+ G G+PL+ L+ V K L + H + P+RI + Sbjct: 153 VVLMGMGEPLL----NLENVFKALERM-------LHPEGLAMSPRRITLSTVGIPRGIYK 201 Query: 200 LKEAGK--PVYIAIHA------------NHPYEFSE--EAIAAISRLANAGIILLSQSVL 243 + E G + +++HA H Y +E EA+ I L L Sbjct: 202 MAEWGLEVRLALSLHAPDDETRQRIIPTAHRYSIAEIMEAVRHYYAKTKRRITLE--YTL 259 Query: 244 LKGINDD---PEILANLMRTF-VELRIKP 268 LKG+ND LA R V + + P Sbjct: 260 LKGVNDHDWQARALAQHFRGLSVHMNLIP 288 >gi|171317149|ref|ZP_02906351.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria MEX-5] gi|171097716|gb|EDT42546.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria MEX-5] Length = 370 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 22/114 (19%) Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118 P+ D + P + G+ H PD L + + C C +C F + Sbjct: 7 PLADVSGMPDISGVAHT-PDGALADRFARPLHDLRISVTDRCNFRCVYCMPRDVFDKNYP 65 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 +L+ ++ E + ++ TGG+PL+ K L+ +++ L + Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116 >gi|146337422|ref|YP_001202470.1| putative Fe-S oxidoreductases [Bradyrhizobium sp. ORS278] gi|146190228|emb|CAL74220.1| conserved hypothetical protein; putative predicted Fe-S oxidoreductases [Bradyrhizobium sp. ORS278] Length = 470 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 35/171 (20%), Positives = 61/171 (35%), Gaps = 31/171 (18%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155 L+++ C + C CF Q+ E L + Q + + V +GG+P Sbjct: 103 ALIEITDHCNLTCPVCF--AESSPQRAHFSPLATVERMLDALVQSEGEPDLVQISGGEP- 159 Query: 156 ILSHKRLQKVLKTLRY--IKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 L + +L +R I+HV I LR R P + + L E + + + Sbjct: 160 TLHPEFFD-ILAAVRARPIRHVMINTNGLRIA-REP---------DFVSRLAETKRGLEV 208 Query: 210 AIHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + A+ L AGI + + +G+NDD Sbjct: 209 YLQFDSLSRAGLTNIRGADLRRIRQQALENLERAGISTTLVATIKRGVNDD 259 >gi|170732420|ref|YP_001764367.1| molybdenum cofactor biosynthesis protein A [Burkholderia cenocepacia MC0-3] gi|254245935|ref|ZP_04939256.1| Radical SAM:Molybdenum cofactor synthesis C [Burkholderia cenocepacia PC184] gi|124870711|gb|EAY62427.1| Radical SAM:Molybdenum cofactor synthesis C [Burkholderia cenocepacia PC184] gi|169815662|gb|ACA90245.1| molybdenum cofactor biosynthesis protein A [Burkholderia cenocepacia MC0-3] Length = 370 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F ++ +L+ ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTHEEIERVARLFVAH-GVEKIRITGGE 99 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K L+ +++ L + Sbjct: 100 PLL--RKNLEFLIERLARL 116 >gi|107022186|ref|YP_620513.1| molybdenum cofactor biosynthesis protein A [Burkholderia cenocepacia AU 1054] gi|116689132|ref|YP_834755.1| molybdenum cofactor biosynthesis protein A [Burkholderia cenocepacia HI2424] gi|105892375|gb|ABF75540.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia AU 1054] gi|116647221|gb|ABK07862.1| GTP cyclohydrolase subunit MoaA [Burkholderia cenocepacia HI2424] Length = 370 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%) Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118 P+ D + P + G+ H PD L + + C C +C F ++ Sbjct: 7 PLADVSGMPDVSGVAHA-PDGTLADTFARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYP 65 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 +L+ ++ E + ++ TGG+PL+ K L+ +++ L + Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116 >gi|312898876|ref|ZP_07758264.1| radical SAM domain protein [Megasphaera micronuciformis F0359] gi|310620038|gb|EFQ03610.1| radical SAM domain protein [Megasphaera micronuciformis F0359] Length = 481 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 63/179 (35%), Gaps = 42/179 (23%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS------KDTEAALAYIQEK 141 + H D L + C +C +C F +VG++K L +D + + Sbjct: 150 VQHETRDAALYVGIPYCASHCLYCSFPSRLVGNEKAERLLDFTNKLIEDIQDVQRLCSDT 209 Query: 142 S-QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK------HVQILRFHSRVPIVDPQRINP 194 +I + GG P LS + +++++ L+ + V+ R P + Sbjct: 210 GIRIDSIYVGGGTPTSLSVEAVERIMSALQPLAGACREWTVEAGR---------PDTMTE 260 Query: 195 ELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR-------------LANAGIILLS 239 E + L+ G + I P + + A+ R +AG +++ Sbjct: 261 EKARILRAYGVDRISIN-----PQTMQQHLLDALGRRHTVRDIYRMFDYCRDAGFSVIN 314 >gi|289548187|ref|YP_003473175.1| nitrogenase cofactor biosynthesis protein NifB [Thermocrinis albus DSM 14484] gi|289181804|gb|ADC89048.1| nitrogenase cofactor biosynthesis protein NifB [Thermocrinis albus DSM 14484] Length = 472 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 36/211 (17%), Positives = 70/211 (33%), Gaps = 38/211 (18%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144 H Y R+ + + C + C +C R+ G + + + LA E Q+ Sbjct: 39 HFYA-RMHVAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPEEAAKKVLAVAMEIPQL 97 Query: 145 WEVIFTG-GDPLILSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQ----------R 191 V G GDPL + + +++K +++ + ++D Sbjct: 98 TVVGIAGPGDPLANPERTFRTFELIKE--KAPDIKLC-LSTNGLVLDKYINKIKDLEIDH 154 Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAI--------AAISRLANAGIILLSQSVL 243 + + + +Y I NH +EA + GI++ +V Sbjct: 155 VTITINAVSVDTASKIYPWIFYNHRRYRDKEAAKILLEKQYEGLQACVENGILVKVNTVF 214 Query: 244 LKGINDDPEILANLMRTFVELR-----IKPY 269 + IN E + L + + I PY Sbjct: 215 VPEIN--GEEIPELSKKVRSMGAFLHNIMPY 243 >gi|237745122|ref|ZP_04575603.1| predicted protein [Fusobacterium sp. 7_1] gi|229432351|gb|EEO42563.1| predicted protein [Fusobacterium sp. 7_1] Length = 367 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 66/185 (35%), Gaps = 36/185 (19%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C C C+ + + + T E L Y Q+ ++I + GGDP + Sbjct: 31 FYITNKCTESCEHCYLKNTKIQKELTTKEVISKIEEFLEYCQKTNKIPIIDLIGGDPFLR 90 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 ++ +L+ L+ ++ + F + P + PQ I L E G Y + + Sbjct: 91 LD--IKNILRYLK----LKKINFGIKGNPNLLPQNI-----NLLVEYGARRY-QLSLDGT 138 Query: 217 YEFSE---------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 E + + I +I L + I + + L E L + Sbjct: 139 EEIHDRIRSKGSFKKTIESIKLLNDVNIPVNIKFTL------SSENETELWKLL------ 186 Query: 268 PYYLH 272 YYL+ Sbjct: 187 -YYLY 190 >gi|170700217|ref|ZP_02891233.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria IOP40-10] gi|170134850|gb|EDT03162.1| molybdenum cofactor biosynthesis protein A [Burkholderia ambifaria IOP40-10] Length = 370 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 44/114 (38%), Gaps = 22/114 (19%) Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118 P+ D + P + G+ H PD L + + C C +C F + Sbjct: 7 PLADVSGMPDISGVAHT-PDGALADRFARPLRDLRISVTDRCNFRCVYCMPRDVFDKNYP 65 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 +L+ ++ E + ++ TGG+PL+ K L+ +++ L + Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116 >gi|158320587|ref|YP_001513094.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus oremlandii OhILAs] gi|229890436|sp|A8MFD5|MIAB_ALKOO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|158140786|gb|ABW19098.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus oremlandii OhILAs] Length = 471 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 51/130 (39%), Gaps = 12/130 (9%) Query: 78 IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 + D ++G+ +Y + + +++ C +C +C G ++ ++ A Sbjct: 159 VWDEETGIVEGLPANRKYDLKGFINIMYGCNNFCTYCIVPYTRGRERSREVA-DIIREAT 217 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDP 189 + E+ G + + K L+ +L+ L I ++ +RF + P Sbjct: 218 D--LANNGTKEITLLGQN-VNSYGKTLEHPIDFADLLRALNKIDGIERIRFMTSHPKDLS 274 Query: 190 QRINPELIQC 199 +R+ + +C Sbjct: 275 ERLIDAIAEC 284 >gi|327398946|ref|YP_004339815.1| Radical SAM domain-containing protein [Hippea maritima DSM 10411] gi|327181575|gb|AEA33756.1| Radical SAM domain protein [Hippea maritima DSM 10411] Length = 356 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDP 154 R+ ++L C C+ CF+ +K + + + ++ EV+ G G+P Sbjct: 22 RVYIELTSACNFNCKMCFKNAFT--EKDGFMDKRTLSNLKKSLTSLPKLKEVVLGGIGEP 79 Query: 155 LILSHKRLQKVLKTLRY 171 LI + L+ ++ L+ Sbjct: 80 LIHND--LKDIVTFLKE 94 >gi|154496671|ref|ZP_02035367.1| hypothetical protein BACCAP_00963 [Bacteroides capillosus ATCC 29799] gi|150273923|gb|EDN01023.1| hypothetical protein BACCAP_00963 [Bacteroides capillosus ATCC 29799] Length = 386 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 24/170 (14%), Positives = 57/170 (33%), Gaps = 39/170 (22%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-------------AALAYIQEKSQI 144 ++ C + C++CF E S + + + + Y +++ Sbjct: 21 IIACTKECNMRCKYCFEEENFKSDYSVPSAKINADFQLGIPYFERFGRELIEYNRKRGFR 80 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 E F GG+P+++ + + ++ + + + + I E++ L++ Sbjct: 81 TEFTFHGGEPMLIKPELIAQLCEYYISLDPAVLFNVQTNGTIC-----TEEMLGLLRKYR 135 Query: 205 KPVYIAI----------------HANHPYEFSEEAIAAISRLANAGIILL 238 V ++I H H + I ++ AGI L Sbjct: 136 FRVGVSIDGTEALHDENRVFPNGHGTH-----SVVMQNIRKMQKAGIQLG 180 >gi|78065694|ref|YP_368463.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. 383] gi|77966439|gb|ABB07819.1| GTP cyclohydrolase subunit MoaA [Burkholderia sp. 383] Length = 370 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 22/114 (19%) Query: 77 PIGDNNHSP-LKGIVHRYPDRIL------------LKLLHVCPVYCRFC-----FRREMV 118 P+ D + P + G+ H PD L + + C C +C F ++ Sbjct: 7 PLADVSGMPDVSGVAHA-PDGTLADTFARPLRDLRISVTDRCNFRCVYCMPRAVFDKDYP 65 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 +L+ ++ E + ++ TGG+PL+ K L+ +++ L + Sbjct: 66 FLPHSALLTHEEIERVARLFVAH-GVEKIRITGGEPLL--RKNLEFLIERLARL 116 >gi|118579699|ref|YP_900949.1| radical SAM domain-containing protein [Pelobacter propionicus DSM 2379] gi|118502409|gb|ABK98891.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379] Length = 344 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 31/156 (19%), Positives = 65/156 (41%), Gaps = 17/156 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 RY ++L L C + C +C+ G ++G +S + AL + V +G Sbjct: 5 RY---LVLGLTTRCNLSCAYCY---HAGLERGMDMSPEVARTALDLVALGEGPLHVQLSG 58 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+P L+ + ++ V+ +R +K + + + ++ +L++ L E G V +++ Sbjct: 59 GEP-TLAREMVRYVVAEIRRLKRPCTVGIQTNATL-----LDEDLVRFLGEHGVQVGVSL 112 Query: 212 HANHP--YEFSEEAIAA---ISRLANAGIILLSQSV 242 EA A ++ L G+ +V Sbjct: 113 DGPPAIQQRLRGEADKALLGLTLLEKMGVPFRVTTV 148 >gi|296446358|ref|ZP_06888303.1| Radical SAM domain protein [Methylosinus trichosporium OB3b] gi|296256131|gb|EFH03213.1| Radical SAM domain protein [Methylosinus trichosporium OB3b] Length = 298 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 11/91 (12%) Query: 95 DRILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-----SQIWEVI 148 D ++L + C C FC EM + + + E L ++ + V Sbjct: 20 DSLILPVTDGCSWNRCAFC---EMYTAPQKRFRPRDEAE-VLESLRRCGAELGDSVKRVF 75 Query: 149 FTGGDPLILSHKRLQKVLKTLRY-IKHVQIL 178 GD + LS +RL +L +R + V+ + Sbjct: 76 LADGDAMTLSTRRLATILAAIRRELPGVRRV 106 >gi|295115178|emb|CBL36025.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [butyrate-producing bacterium SM4/1] Length = 457 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 26/152 (17%), Positives = 66/152 (43%), Gaps = 20/152 (13%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + I + D I ++ S +YP + + ++ C +C +C + G ++ Sbjct: 141 MVIDIWKDTDKIVEDLPS-----ERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSRRP 195 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL------QKVLKTLRYIKHVQILRF 180 +D + + + EV+ G + + K L ++L+ + I+ ++ +RF Sbjct: 196 --EDIIKEIEGLVAD-GVVEVMLLGQN-VNSYGKNLPEPITFAELLRRVEQIEGLERIRF 251 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 + P+ ++ ELI+ ++++ K + +H Sbjct: 252 MTSH----PKDLSDELIEVMRDS-KKICRHLH 278 >gi|116748310|ref|YP_844997.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697374|gb|ABK16562.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB] Length = 331 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 66/188 (35%), Gaps = 29/188 (15%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 V ++P ++L+ H C + C C R T+ + L + E V Sbjct: 23 VEKFPLVLMLEPTHRCNLTCSGCGRIR---EYHDTLHQEMTLDECLRSVDESPSP-VVTI 78 Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 TGG+PL+ S R+Q ++ + L KH+ F + + E + + + Sbjct: 79 TGGEPLLYS--RIQALVDSVLARKKHIY---FCTNAL------LLEESLPMFQPHSHFTW 127 Query: 209 IAIHANHPYEFSEE-------AIAAISRLANA---GIILLSQSVLLKGINDDPEILANLM 258 +H + + A++ + A G + + + + + D + L L Sbjct: 128 -NVHFDGTETVHDAIIGRPGGFQKALAGVRAAKARGFRVSTNTTVYR--ETDVDDLERLF 184 Query: 259 RTFVELRI 266 + Sbjct: 185 EQLAAAGV 192 >gi|304411770|ref|ZP_07393382.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica OS183] gi|307306178|ref|ZP_07585923.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica BA175] gi|304349958|gb|EFM14364.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica OS183] gi|306911051|gb|EFN41478.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica BA175] Length = 337 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + VC C +C K LS + E ++ + ++ TGG+P + Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217 +++ + R H+ + R+ + + + +++ + P Sbjct: 87 D--FTDIIRVVADNP-----RIHTIATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139 Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249 + + E + I +AG + +VLLKG+ND Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179 >gi|149183016|ref|ZP_01861471.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1] gi|148849300|gb|EDL63495.1| coproporphyrinogen III oxidase [Bacillus sp. SG-1] Length = 450 Score = 41.6 bits (97), Expect = 0.19, Method: Composition-based stats. Identities = 37/205 (18%), Positives = 82/205 (40%), Gaps = 22/205 (10%) Query: 37 IALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIG---DNNHSPLKGIVHRY 93 I T + + P + I R + +E ++ +E+ D + D S + + Sbjct: 68 IRPTKLYHKSVREGTPREEIRR----KLKEDYLITDEKIDLMERIVDRQLSVVPDLYSLQ 123 Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDTEAALAYIQEKS-QIWE 146 + + + CP C +C F + ++G V S + + +++E +I Sbjct: 124 KEISIYIGIPFCPTKCAYCTFPAYAILGKQGRVDSFLTGLHYEIQETGRWLKENGVKITT 183 Query: 147 VIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204 + + GG P ++ +++ + + + R V +R + V P I P+ ++ L + Sbjct: 184 IYYGGGTPTSITAEQMDLLYEEMYRSFPDVDQVREVT-VEAGRPDTITPDKLEVLNKWNI 242 Query: 205 KPVYIAIHANHPYEFSEEAIAAISR 229 + I P ++ E + AI R Sbjct: 243 DRISIN-----PQSYTNETLKAIGR 262 >gi|298373586|ref|ZP_06983575.1| Fe-S oxidoreductase [Bacteroidetes oral taxon 274 str. F0058] gi|298274638|gb|EFI16190.1| Fe-S oxidoreductase [Bacteroidetes oral taxon 274 str. F0058] Length = 417 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C YC +C G + ++ A+A E+I TG Sbjct: 141 RTRYFLKVQDGCNYYCTYCTIPFARGKSRSASVAVTMDTIRRAIA-----EGAREIILTG 195 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GD S +R +++ + + R S V+P + ++I+ + + + Sbjct: 196 VNIGDFGNGSSERFIDLVRNIDDMTDEVRFRISS----VEPNLLEDDIIRLIAHSRR--- 248 Query: 209 IAIHA 213 IA H Sbjct: 249 IAPHF 253 >gi|284047499|ref|YP_003397838.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731] gi|283951720|gb|ADB46523.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731] Length = 302 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 13/116 (11%) Query: 98 LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQIWEVIFTGGDP 154 +L++ C C FC M + +V ++ + ALA ++Q+ + GD Sbjct: 24 ILRVTRGCAHNTCTFC---AMYKDVRFSVCPDEEISRQIALAARYARNQVKRIFLADGDA 80 Query: 155 LILSHKRLQKVLKTLRY-IKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPV 207 L+L ++L K+L L ++Q + R + R + E + L+EAG + Sbjct: 81 LVLPTEKLLKILAVLYRTFPNLQRVTSYAGPRDIL----RKSDEDMVRLREAGLKM 132 >gi|219667417|ref|YP_002457852.1| radical SAM protein [Desulfitobacterium hafniense DCB-2] gi|219537677|gb|ACL19416.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2] Length = 318 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 29/108 (26%), Positives = 43/108 (39%), Gaps = 7/108 (6%) Query: 55 PIARQFIPQKEELNILP-EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113 P+ RQ I Q E+L E + ++H G VH R+ L + C + CRFC Sbjct: 12 PLRRQIINQIEQLIETQMEHQLRTPNISDHPCFNGAVHGKKGRLHLPISPACNIQCRFCR 71 Query: 114 R-----REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPL 155 R G KG + + + ++ +I V G GD L Sbjct: 72 RACNSKELRPGVAKGILPIEEAVDIVGKALELCPEITVVGIAGPGDAL 119 >gi|148263090|ref|YP_001229796.1| radical SAM domain-containing protein [Geobacter uraniireducens Rf4] gi|146396590|gb|ABQ25223.1| Radical SAM domain protein [Geobacter uraniireducens Rf4] Length = 332 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 33/186 (17%), Positives = 65/186 (34%), Gaps = 29/186 (15%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 +YP ++L+ H+C + C C R T+ E LA + E V TG Sbjct: 25 KYPLVLMLEPTHLCNLACSGCGRIR---EYADTIQDMMSLEECLASVDECPAP-VVTITG 80 Query: 152 GDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G+P + + ++++ L KH+ + +++ + ++ + Sbjct: 81 GEPFLYP--HIFELIEAVLERGKHIY---LCTNALLLEKA------LDNMRPHP-NFTLN 128 Query: 211 IHA-----NHPY--EFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEILANLMRT 260 IH H E AI + A G + + + + K D + L Sbjct: 129 IHMDGMEETHDRILERKGTFKTAIEAIKKAKKLGFRVCTNTTIFK--ETDLVEIEMLFSR 186 Query: 261 FVELRI 266 E+ + Sbjct: 187 LQEIGV 192 >gi|310643295|ref|YP_003948053.1| radical sam domain protein [Paenibacillus polymyxa SC2] gi|309248245|gb|ADO57812.1| Radical SAM domain protein [Paenibacillus polymyxa SC2] Length = 368 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 6/68 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 P ++ ++ C + C C R E L+ ++ + L I E V+FTG Sbjct: 14 PFIVIWEVTRACALKCLHC-RAEAQYKPDPRQLTFEEGKKLLDQIAEMNHP---LVVFTG 69 Query: 152 GDPLILSH 159 GDPL Sbjct: 70 GDPLSRPD 77 >gi|322434214|ref|YP_004216426.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9] gi|321161941|gb|ADW67646.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9] Length = 469 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 33/181 (18%), Positives = 60/181 (33%), Gaps = 34/181 (18%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDP----IGDNNHSPLKGI----VHRYPDR------ 96 + +DP + I L+ ++ I D + P +HRY + Sbjct: 138 DADDPNWKSKIAGAAYLDEAGGFHQNAARAQIADLDAQPWPARHAIDLHRYVETWRTHHQ 197 Query: 97 ---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + CP CR+C V Q + ++ K ++ + D Sbjct: 198 QGSVNFITARGCPYRCRWC--SHQVYGQTHRRRDPIKVVDEVEWL-MKEYTPDIAWVSDD 254 Query: 154 PLILSHKRLQKVLKTLRY----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208 ++H ++K +R I I SR R+N E++ L E G ++ Sbjct: 255 VFTINHDWIRKYSAEMRRRGLHIPFECI----SRA-----DRLNEEMLDLLAELGCFRIW 305 Query: 209 I 209 I Sbjct: 306 I 306 >gi|222056186|ref|YP_002538548.1| protein of unknown function DUF512 [Geobacter sp. FRC-32] gi|221565475|gb|ACM21447.1| protein of unknown function DUF512 [Geobacter sp. FRC-32] Length = 433 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 42/213 (19%), Positives = 67/213 (31%), Gaps = 64/213 (30%) Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKG 123 E+ + +E E P+G +P+ C C FCF ++ G +K Sbjct: 61 WEMEVERDESE-PLGLIFQAPVP---------------AECGNKCIFCFVHQLPKGLRKP 104 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 + +D + Y V D L IK ++ Sbjct: 105 LYVKDEDYRLSFLY------GNYVTLANIDA------------SDLERIKSQRL------ 140 Query: 184 VPIVDPQRINPELI--QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 P+ L+ + L + G P + E I LA AGI + +Q Sbjct: 141 SPLYISVHATDPLVRERMLGKTGIPPIL--------EI-------IKELAGAGITMHTQV 185 Query: 242 VLLKGIND------DPEILANLMRTFVELRIKP 268 VL G+ND L++L L + P Sbjct: 186 VLCPGVNDGKVLAQTVADLSSLFPAVASLAVVP 218 >gi|89894712|ref|YP_518199.1| hypothetical protein DSY1966 [Desulfitobacterium hafniense Y51] gi|123279971|sp|Q24W37|RIMO_DESHY RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|89334160|dbj|BAE83755.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 445 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 20/118 (16%) Query: 97 ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 +K+ C YC +C R + ++L ++ EA + EV+ Sbjct: 151 AYVKVAEGCDNYCTYCIIPHVRGHFRSRTQESIL--REVEAM-----ASEGVKEVLLIAQ 203 Query: 153 DPL-ILSHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D + RL ++K + I+ ++ +R P+ ELI +KE K Sbjct: 204 DTTRYGKDRYGEYRLPSLIKEIARIEGIEWIRL----MYCYPELFTDELITVMKETPK 257 >gi|293416947|ref|ZP_06659584.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli B185] gi|291431523|gb|EFF04508.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli B185] Length = 445 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|262384855|ref|ZP_06077987.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 2_1_33B] gi|262293571|gb|EEY81507.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 2_1_33B] Length = 444 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 11/123 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C YC +C G + ++S E A E++ TG Sbjct: 149 RTRHFLKVQDGCDYYCSYCTIPFARGRSRNGTIASM-VEQARE--VASKGGKEIVLTGVN 205 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + +++ L ++ + R S ++P I E I K Sbjct: 206 IGDFGKSTDETFIDLIRALDEVEGIVRYRISS----IEPNLITDEAID-FVAHSKRFAPH 260 Query: 211 IHA 213 H Sbjct: 261 FHI 263 >gi|229584084|ref|YP_002842585.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27] gi|228019133|gb|ACP54540.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27] Length = 394 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 55/120 (45%), Gaps = 8/120 (6%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 + + +P+ L + EE ++ + + + L L + C C +CF++ Sbjct: 33 LRKGIVPEH--LKDIIEEGFSATDEDLDEEIDKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173 G +K +S K + YI++ + +V T GG+PL L ++++++ + L +K Sbjct: 91 ---GFRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146 >gi|46578994|ref|YP_009802.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris str. Hildenborough] gi|120603415|ref|YP_967815.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris DP4] gi|46448407|gb|AAS95061.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris str. Hildenborough] gi|120563644|gb|ABM29388.1| GTP cyclohydrolase subunit MoaA [Desulfovibrio vulgaris DP4] gi|311232845|gb|ADP85699.1| molybdenum cofactor biosynthesis protein A [Desulfovibrio vulgaris RCH1] Length = 341 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 32/187 (17%), Positives = 71/187 (37%), Gaps = 26/187 (13%) Query: 78 IGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDT 131 + + P +V + R+ L + C + C +C+ + +L ++ Sbjct: 1 MNHYDDRPASSLVDLHGRRVRYLRLSVTDRCNLRCLYCWGGGGMRFI--PHDDILRYEEM 58 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 + + +S + +V TGG+PL+ K + +++ +R LR + Sbjct: 59 ARLVD-VAVESGVEKVRLTGGEPLV--RKNVLHLVELVRKKHPAIDLRITTNG------T 109 Query: 192 INPELIQCLKEAGKPVYIAI---------HANHPYEFSEEAIAAISRLANAGIILLSQSV 242 + + L++ G H +F + +A + + AG+ L +V Sbjct: 110 LLESHVAGLRDLGVSTVNVSLDTFRREVFHEVTGRDFLPQVMAGMEAVLAAGLSLKVNAV 169 Query: 243 LLKGIND 249 L+G+ND Sbjct: 170 ALRGVND 176 >gi|317501694|ref|ZP_07959885.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium 8_1_57FAA] gi|331088421|ref|ZP_08337336.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium 3_1_46FAA] gi|316896945|gb|EFV19025.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium 8_1_57FAA] gi|330408188|gb|EGG87676.1| MiaB-like tRNA modifying enzyme [Lachnospiraceae bacterium 3_1_46FAA] Length = 431 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 25/130 (19%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C +C +C + + S+ T+ L ++ + EV+ TG Sbjct: 143 HTRAYIKVQDGCNQFCTYC-----IIPYARGRVRSRQTKDVLEEVRDLAGNGYKEVVLTG 197 Query: 152 GDPLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 LS + L ++K + ++ ++ +R S ++P I E + L E Sbjct: 198 I---HLSSYGIDFDGQRHLLDLIKEVHKVEGIERIRLGS----LEPGIITEEFAKELSEM 250 Query: 204 GKPVYIAIHA 213 K + H Sbjct: 251 PK---VCPHF 257 >gi|307596561|ref|YP_003902878.1| Radical SAM domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307551762|gb|ADN51827.1| Radical SAM domain protein [Vulcanisaeta distributa DSM 14429] Length = 354 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 38/190 (20%), Positives = 67/190 (35%), Gaps = 44/190 (23%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCF---------RREMVGSQKGTVLSSKDTEAALAYI 138 GIV R + I ++ +CP+ C +C R T+L E + Sbjct: 31 GIVDRGTNIIEVRPTTLCPLSCIYCSVNAGPRSTNRWAEFVDDPETLL--MALEEVVR-F 87 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 + I I G+P + L +++ ++ I V I+ +R+ E ++ Sbjct: 88 KGTKDIEVHIDGMGEPGVYP--YLTYLIRGIKEIDGVSIVSMQTRL-----YMFTEEELR 140 Query: 199 CLKEAGK---PVYIAI---------------HANHPYEFSEEAIAAISRLANAGIILLSQ 240 L +AG + I NH E + A+ GI +++ Sbjct: 141 ELAQAGLDRINLSIDTLNPELAKKISGVPWYDVNHVMEL---VVQALEL----GINVIAS 193 Query: 241 SVLLKGINDD 250 V L IND+ Sbjct: 194 PVWLPSINDN 203 >gi|256811190|ref|YP_003128559.1| Radical SAM domain protein [Methanocaldococcus fervens AG86] gi|256794390|gb|ACV25059.1| Radical SAM domain protein [Methanocaldococcus fervens AG86] Length = 377 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 14/143 (9%) Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 EE+ EE D + + ++G ++++L + +C C +C E ++ Sbjct: 4 EEIEKYLEENFDKLPEGCKQCVRG------EKLVLFITGICNNNCYYCPLSEKRKNKDVI 57 Query: 125 VLSSKDTEAALAYIQEKS--QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + + I+E V TGG+PL L R K L L+ + FHS Sbjct: 58 YANERLLTTVGEAIEEAKLCSSKGVGITGGNPL-LKINRTVKFLNALKN----EFDEFHS 112 Query: 183 RVPIVDPQRINPELIQCLKEAGK 205 + P+ ++ E ++ LKEAG Sbjct: 113 HLYAT-PETVDEEKLKLLKEAGL 134 >gi|226311193|ref|YP_002771087.1| molybdenum cofactor biosynthesis protein A [Brevibacillus brevis NBRC 100599] gi|254811536|sp|C0Z9B3|MOAA_BREBN RecName: Full=Molybdenum cofactor biosynthesis protein A gi|226094141|dbj|BAH42583.1| molybdenum cofactor biosynthesis protein A [Brevibacillus brevis NBRC 100599] Length = 339 Score = 41.6 bits (97), Expect = 0.20, Method: Composition-based stats. Identities = 30/174 (17%), Positives = 66/174 (37%), Gaps = 40/174 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C CR+C ++ G + +L+ ++ I + ++ TGG+ Sbjct: 18 ISVTDKCNFRCRYCMPADIFGPDFEFLPQSKLLTFEEITRLTQ-IFTSLGVGKIRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS------------------RVPIVDPQRINPE 195 PL+ + L ++++ +R ++ VQ + + RV + ++ E Sbjct: 77 PLM--RRNLPELIRMIREVEGVQDIAMTTNGSLLSRHAQALKEAGLDRVTVSL-DSLDNE 133 Query: 196 LIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 L G V + + I A+AG+ + V+ +G+ND Sbjct: 134 RFGMLNGRGYQV-------------DSVLDGIRVAADAGLSIKINMVVQRGVND 174 >gi|328554278|gb|AEB24770.1| ribosomal protein S12 methylthiotransferase [Bacillus amyloliquefaciens TA208] gi|328912675|gb|AEB64271.1| ribosomal protein S12 methylthiotransferase [Bacillus amyloliquefaciens LL3] Length = 451 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G +L S+D E + Q+ + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196 Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + K+L+ L ++ ++ +R S ++ +I E+I+ L + Sbjct: 197 IHTGGYGED---MKDYNFAKLLRELDTRVEGLKRIRISS----IEASQITDEVIEVLDAS 249 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 250 DK-IVRHLHI 258 >gi|325981206|ref|YP_004293608.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Nitrosomonas sp. AL212] gi|325530725|gb|ADZ25446.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Nitrosomonas sp. AL212] Length = 442 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 23/144 (15%), Positives = 45/144 (31%), Gaps = 45/144 (31%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153 + ++ C YC FC V S+ + L I I E+ G + Sbjct: 148 TAFVSIMEGCSKYCSFC-----VVPYTRGEEVSRPLDDVLTEIAVLAAQGIKEITLLGQN 202 Query: 154 P----LILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 +++ + +L+ L I ++ +R+ + Sbjct: 203 VNAYLGMMNDGEIADFALLLEYLHDIPGIERIRYTT------------------------ 238 Query: 207 VYIAIHANHPYEFSEEAIAAISRL 230 +HP EF+ I A ++L Sbjct: 239 -------SHPKEFTTRLIQAYNQL 255 >gi|308174331|ref|YP_003921036.1| 30S ribosomal protein S12 methylthiotransferase [Bacillus amyloliquefaciens DSM 7] gi|307607195|emb|CBI43566.1| ribosomal protein S12 methylthiotransferase [Bacillus amyloliquefaciens DSM 7] Length = 451 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G +L S+D E + Q+ + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196 Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + K+L+ L ++ ++ +R S ++ +I E+I+ L + Sbjct: 197 IHTGGYGED---MKDYNFAKLLRELDTRVEGLKRIRISS----IEASQITDEVIEVLDAS 249 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 250 DK-IVRHLHI 258 >gi|154686803|ref|YP_001421964.1| YqeV [Bacillus amyloliquefaciens FZB42] gi|154352654|gb|ABS74733.1| YqeV [Bacillus amyloliquefaciens FZB42] Length = 451 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G +L S+D E + Q+ + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196 Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + K+L+ L ++ ++ +R S ++ +I E+I+ L + Sbjct: 197 IHTGGYGED---MKDYNFAKLLRELDTRVEGLKRIRISS----IEASQITDEVIEVLDAS 249 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 250 DK-IVRHLHI 258 >gi|302865999|ref|YP_003834636.1| MiaB-like tRNA modifying enzyme YliG [Micromonospora aurantiaca ATCC 27029] gi|302568858|gb|ADL45060.1| MiaB-like tRNA modifying enzyme YliG [Micromonospora aurantiaca ATCC 27029] Length = 500 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 33/166 (19%) Query: 81 NNHSPLKG---IVHRYPD--RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDT 131 + H+P + HR LKL C C FC FR V +L+ + Sbjct: 169 DAHTPAHLRQVLRHRLDTGPVASLKLASGCDRRCAFCAIPAFRGAFVSRTPDELLAEAEW 228 Query: 132 EAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 A K+ + E++ G D + + L+K+L L I + +R Sbjct: 229 LA-------KTGVRELVLVSENSTSYGKD--LGDPRALEKLLPQLAAIDGIVRVR----A 275 Query: 185 PIVDPQRINPELIQCLKEA-GKPVYIAIHANHPYEFSEEAIAAISR 229 + P P L++ + G Y + H E + + R Sbjct: 276 SYLQPAETRPGLVEVIATTPGVAAYFDLSFQHSSE---PVLRRMRR 318 >gi|268608005|ref|ZP_06141736.1| hypothetical protein RflaF_00715 [Ruminococcus flavefaciens FD-1] Length = 224 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 41/171 (23%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 + L+ C C FCF +M + T+ D +A L+++Q V T Sbjct: 75 ETFLMDNKQSCSNKCVFCFIDQMPKGMRETLYFKDD-DARLSFLQGN----YVTLT---- 125 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L + ++++ I + H+ +P+ V + H Sbjct: 126 -NLKQSDIDRIIEMKLNI----NVSVHT----TNPE--------------LRVKMM-H-- 159 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 F+ E + I +LA GI L Q V G+ND L R+ +L Sbjct: 160 --NRFAGEKLKFIWQLAENGIKLNCQIVCCPGLNDG----DELRRSLTDLG 204 >gi|187934049|ref|YP_001885400.1| Fe-S oxidoreductase [Clostridium botulinum B str. Eklund 17B] gi|187722202|gb|ACD23423.1| Fe-S oxidoreductase [Clostridium botulinum B str. Eklund 17B] Length = 444 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 53/160 (33%), Gaps = 52/160 (32%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF ++ + T+ D Sbjct: 80 LMDKAKRCSNKCIFCFIDQLPPGMRDTLYFKDD--------------------------- 112 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP- 216 RL + + +++ ++ + +K P+ +++H +P Sbjct: 113 -DSRLSFLQGNFVTLTNMK----------------EEDIDRIIKYHISPINVSVHTTNPE 155 Query: 217 -------YEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 F+ + + RL +AGII+ SQ V + GIN+ Sbjct: 156 LRVKMLNNRFAGNILERLKRLTDAGIIINSQVVCIPGINN 195 >gi|157693043|ref|YP_001487505.1| 2-methylthioadenine synthetase [Bacillus pumilus SAFR-032] gi|157681801|gb|ABV62945.1| 2-methylthioadenine synthetase [Bacillus pumilus SAFR-032] Length = 453 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G +L S+D E + Q+ + E++ T Sbjct: 143 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVINQAQQLVDAGYKEIVLTG 197 Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D L K+LK L + ++ +R S ++ +I E+I+ L ++ Sbjct: 198 IHTGGYGED---LKDYNFAKLLKELDERVNGLKRIRISS----IEASQITDEVIEVLDQS 250 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 251 DK-IVRHLHI 259 >gi|325960201|ref|YP_004291667.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21] gi|325331633|gb|ADZ10695.1| Radical SAM domain protein [Methanobacterium sp. AL-21] Length = 349 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 41/84 (48%), Gaps = 6/84 (7%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTG 151 P+ + + + + C C +C+R+ S+ G+ +S +D + L + ++++ G Sbjct: 36 PELVDISISNYCTNDCDYCYRQ---SSETGSFMSIEDFQTCLEQLNNTKFGSVFQIALGG 92 Query: 152 GDPLILSH-KRLQKVLKTLRYIKH 174 G+PL+ ++ ++ + I + Sbjct: 93 GEPLLHPDFSKMLRLTREYNIIPN 116 >gi|153815340|ref|ZP_01968008.1| hypothetical protein RUMTOR_01574 [Ruminococcus torques ATCC 27756] gi|145847402|gb|EDK24320.1| hypothetical protein RUMTOR_01574 [Ruminococcus torques ATCC 27756] Length = 442 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 25/130 (19%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C +C +C + + S+ T+ L ++ + EV+ TG Sbjct: 154 HTRAYIKVQDGCNQFCTYC-----IIPYARGRVRSRQTKDVLEEVRDLAGNGYKEVVLTG 208 Query: 152 GDPLILSH--------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 LS + L ++K + ++ ++ +R S ++P I E + L E Sbjct: 209 I---HLSSYGIDFDGQRHLLDLIKEVHKVEGIERIRLGS----LEPGIITEEFAKELSEM 261 Query: 204 GKPVYIAIHA 213 K + H Sbjct: 262 PK---VCPHF 268 >gi|147919913|ref|YP_686334.1| hypothetical protein RCIX1817 [uncultured methanogenic archaeon RC-I] gi|110621730|emb|CAJ37008.1| conserved hypothetical protein (MiaB/NifB-like) [uncultured methanogenic archaeon RC-I] Length = 422 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 13/114 (11%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 + P RI L L + C C C+ G ++ LS+K+ + + +K ++ ++FTG Sbjct: 114 KSPLRIDLALTYRCNNNCGHCYAG---GPRQTKELSTKEWKQIIDK-AQKFEVPNIVFTG 169 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G+ L+ L++++ + V I + + + E + LK+AG Sbjct: 170 GESLLRED--LEELIAQAEKLGIVT-------GLITNGRLLTKERVAKLKKAGL 214 >gi|117918731|ref|YP_867923.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. ANA-3] gi|117611063|gb|ABK46517.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. ANA-3] Length = 337 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 60/160 (37%), Gaps = 17/160 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + VC C +C + K LS + E ++ + ++ TGG+P + Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPNGKQQFLSLSEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217 +++ + R H+ + R+ + + + +++ + P Sbjct: 87 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAQEWFDAGLRRINVSVDSLDPKM 139 Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249 + + E + I +AG + +VLLKG+ND Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND 179 >gi|320352978|ref|YP_004194317.1| Radical SAM domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320121480|gb|ADW17026.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032] Length = 350 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 32/216 (14%), Positives = 65/216 (30%), Gaps = 35/216 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P I ++ C + C C + S + + L I + V+ +GG+ Sbjct: 5 PKWIAWEITRRCNLRCVHCRSSSQLEIDGHPDFSLTEAKRVLNEIHAYANP-VVVLSGGE 63 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212 PL+ + + LR + + E + +K++G + V +++ Sbjct: 64 PLLRPD------VFEIAAHGTSLGLRIC---LATNGSLVTAETCRDIKQSGIRMVSLSLD 114 Query: 213 ANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 + E ++ AI I L S K + + Sbjct: 115 GSTA-EVHDDFRNQPGAFAGVMNAIRLFNEHQIDFLINSSFTK---RNKAEAPKIYHLVK 170 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 L +YL + G++I+ L Sbjct: 171 SLGATAWYLFM----------IVPTGRGEEIMEELI 196 >gi|313157725|gb|EFR57136.1| tRNA methylthiotransferase YqeV [Alistipes sp. HGB5] Length = 432 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 22/120 (18%), Positives = 42/120 (35%), Gaps = 7/120 (5%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C C +C G + ++ EA + +I GD Sbjct: 142 RTRAFLKVQDGCDYKCAYCTIHYARGGSRNMPIADLVAEARQIAAAGQKEIVITGINTGD 201 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + +R +L+ L ++ ++ R S ++P + E+I + K H Sbjct: 202 FGRTTGERFIDLLRALNEVEGIERYRISS----IEPNLLTDEIIAFCAASPK---FQHHF 254 >gi|306821367|ref|ZP_07454975.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550585|gb|EFM38568.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 296 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 51/131 (38%), Gaps = 17/131 (12%) Query: 87 KGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK- 141 +G+V+R P ++++ C C FC M + + S KD + Y + Sbjct: 4 EGMVYRPPSEAYSLIVQVTTGCSQNTCTFC---AMYKEARFKIRSLKDIKEDFLYAKAHY 60 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRI---NPELI 197 I + GD LI+ + L ++LK + + ++ + P+ I E + Sbjct: 61 RGIDRIFLADGDALIMPFEDLLEILKFIEELFPNLDRV-----SLYASPRSILSKTKEQL 115 Query: 198 QCLKEAGKPVY 208 + L+ + Sbjct: 116 ETLRAHNLKLA 126 >gi|299535792|ref|ZP_07049113.1| hypothetical protein BFZC1_07203 [Lysinibacillus fusiformis ZC1] gi|298728992|gb|EFI69546.1| hypothetical protein BFZC1_07203 [Lysinibacillus fusiformis ZC1] Length = 444 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 13/125 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149 R LK+ C +C FC G + + + Y++ Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPQEVLHQAQQLVDAGYLEIVLTGIHTGG 201 Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 G D L L ++L+ L +K ++ LR S ++ ++ E+I+ L+E+ K V Sbjct: 202 YGQD---LKDYNLAQLLRDLEANVKGLKRLRISS----IEASQLTDEVIEVLRES-KIVV 253 Query: 209 IAIHA 213 +H Sbjct: 254 NHLHI 258 >gi|298479623|ref|ZP_06997823.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. D22] gi|298274013|gb|EFI15574.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides sp. D22] Length = 152 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 23/59 (38%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C +C C E G L+ + ++ + I+ + V F+GGDP L Sbjct: 25 GCSHHCPGCHNPESWNPGVGEELTEEKIQSIIREIKANPLLDGVTFSGGDPFFHPEAFL 83 >gi|297195245|ref|ZP_06912643.1| radical SAM domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] gi|297152723|gb|EDY63581.2| radical SAM domain-containing protein [Streptomyces pristinaespiralis ATCC 25486] Length = 729 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 53/127 (41%), Gaps = 18/127 (14%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY----IQEKSQIW-----EV 147 I++K+ C + C C+ E Q ++ A+++ + E ++ V Sbjct: 12 IVVKVHSRCDLACDHCYIYEHA-DQSWRTRPKAISDEAISWTALRLAEHAKSHALPSVSV 70 Query: 148 IFTGGDPLILSHKRLQKVLKTL-RYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAG 204 I GG+PL+ +RL++V + ++ V LR H+ R+N + E Sbjct: 71 ILHGGEPLLAGPERLRRVCEEFTAALEPVAALDLRIHTNGI-----RLNDRFLDLFDEFD 125 Query: 205 KPVYIAI 211 V I++ Sbjct: 126 VRVGISL 132 >gi|260885593|ref|ZP_05735307.2| 2-methylthioadenine synthetase [Prevotella tannerae ATCC 51259] gi|260851662|gb|EEX71531.1| 2-methylthioadenine synthetase [Prevotella tannerae ATCC 51259] Length = 524 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 15/124 (12%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R LK+ C YC +C R +++ + AA + +I Sbjct: 237 RTRYFLKVQDGCNYYCTYCTIPLARGRSRNGTIASLVGQAEAVAA----EGGKEIVLTGV 292 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GD + + ++++ L +K ++ R S ++P + E+I ++ Sbjct: 293 NTGDFGRSTGETFFQLIQALDRVKGIERYRISS----IEPNLLTDEIIDFCAQSR---AF 345 Query: 210 AIHA 213 H Sbjct: 346 MPHF 349 >gi|288573974|ref|ZP_06392331.1| radical SAM enzyme, Cfr family [Dethiosulfovibrio peptidovorans DSM 11002] gi|288569715|gb|EFC91272.1| radical SAM enzyme, Cfr family [Dethiosulfovibrio peptidovorans DSM 11002] Length = 341 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 44/211 (20%), Positives = 79/211 (37%), Gaps = 47/211 (22%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREM-------VGSQKGTVLSSKDTEAALAYIQEK 141 + H L CP+ C FC VG G L+ + + + Sbjct: 97 MDHGNHHTACLSTQVGCPLRCDFCATGRQGFVRNLTVGEIVGHFLAMESW------LGQD 150 Query: 142 SQIWEVIFTG-GDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPEL 196 I ++F G G+PL L+ + ++K ++ L + K ++ + + + P Sbjct: 151 --IKNIVFMGMGEPL-LNWENVKKAIEILNHPKMRGMGIRRITISTSGVV--PG------ 199 Query: 197 IQCLKEAGKPVYIAIHANHPY-EFS------------EEAIAAISRL-ANAGIILLSQSV 242 I L ++G V ++ + P + + + A+ G + + V Sbjct: 200 ILALADSGLDVRLSFSLHAPNDQIRSKLMPVNERYPLGQVVEALQEFQKKTGNRITVEYV 259 Query: 243 LLKGINDDP----EILANLMRTFVELRIKPY 269 LLK IND+P EI A L V + + PY Sbjct: 260 LLKRINDEPSMAYEIAALLSDLDVYINLIPY 290 >gi|215488780|ref|YP_002331211.1| coproporphyrinogen III oxidase [Escherichia coli O127:H6 str. E2348/69] gi|312968176|ref|ZP_07782386.1| radical SAM superfamily protein [Escherichia coli 2362-75] gi|215266852|emb|CAS11293.1| putative coproporphyrinogen oxidase [Escherichia coli O127:H6 str. E2348/69] gi|312287001|gb|EFR14911.1| radical SAM superfamily protein [Escherichia coli 2362-75] Length = 445 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|171186343|ref|YP_001795262.1| radical SAM domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935555|gb|ACB40816.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta] Length = 368 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 69/169 (40%), Gaps = 26/169 (15%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-F 149 H P + + CP+ C+ C R + + L++++ + + + ++ Sbjct: 12 HSAPLIVFWESTKACPLACKHC-RADAILRPLPGELNTEEGKRLIEQVASFGDPKPLLVI 70 Query: 150 TGGDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 TGGDPL+ + L ++ + S P V P ++PE ++ ++E G Sbjct: 71 TGGDPLMRND--LFDLVDYAVQLGVPT-------SLAPAVSPN-LSPETLKAIREHGVK- 119 Query: 208 YIAIHANHPYEFSEE-----------AIAAISRLANAGIILLSQSVLLK 245 I+I + E + + +AAI +AG+ + +V+ + Sbjct: 120 AISISLDGAREETHDEIRGVPGSFRNTLAAIKAAVDAGVQVQVNTVVWR 168 >gi|91213008|ref|YP_542994.1| coproporphyrinogen III oxidase [Escherichia coli UTI89] gi|117625785|ref|YP_859108.1| coproporphyrinogen III oxidase [Escherichia coli APEC O1] gi|218560578|ref|YP_002393491.1| coproporphyrinogen III oxidase [Escherichia coli S88] gi|237703269|ref|ZP_04533750.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA] gi|331659808|ref|ZP_08360746.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli TA206] gi|91074582|gb|ABE09463.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli UTI89] gi|115514909|gb|ABJ02984.1| putative oxygen independent coproporphyrinogen III oxidase ChuW [Escherichia coli APEC O1] gi|218367347|emb|CAR05126.1| putative oxygen independent coproporphyrinogen III oxidase (chuW-like) [Escherichia coli S88] gi|226902533|gb|EEH88792.1| coproporphyrinogen III oxidase [Escherichia sp. 3_2_53FAA] gi|294491802|gb|ADE90558.1| HugW [Escherichia coli IHE3034] gi|307628582|gb|ADN72886.1| coproporphyrinogen III oxidase [Escherichia coli UM146] gi|315286173|gb|EFU45609.1| radical SAM domain protein [Escherichia coli MS 110-3] gi|323950177|gb|EGB46060.1| HemN protein [Escherichia coli H252] gi|323954735|gb|EGB50516.1| HemN protein [Escherichia coli H263] gi|324009284|gb|EGB78503.1| radical SAM domain protein [Escherichia coli MS 57-2] gi|331053023|gb|EGI25056.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli TA206] Length = 445 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|148264465|ref|YP_001231171.1| molybdenum cofactor biosynthesis protein A [Geobacter uraniireducens Rf4] gi|146397965|gb|ABQ26598.1| GTP cyclohydrolase subunit MoaA [Geobacter uraniireducens Rf4] Length = 326 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 42/169 (24%), Positives = 68/169 (40%), Gaps = 32/169 (18%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLI 156 L + C + C +C E + Q G +LS +D A + I ++ TGG+PL+ Sbjct: 16 LSVTDRCNLRCSYCMPAEGIPKLQHGEMLSYEDLYRVACESVAL--GIEKIRVTGGEPLV 73 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANH 215 K L + + L I ++ L + + EL L++AG + I++ Sbjct: 74 --RKGLVQFIGRLADIPGLKELVLTTNGL------LLGELAIPLRQAGAQRLNISL---- 121 Query: 216 PYEFSEEAIAAISR---LANA--GI---------ILLSQSVLLKGINDD 250 E A I+R L GI + V++KGINDD Sbjct: 122 -DSLKPETFARITRGGDLRKVVDGIAAAEEAGFPPVKINMVVMKGINDD 169 >gi|310659093|ref|YP_003936814.1| hypothetical protein CLOST_1789 [Clostridium sticklandii DSM 519] gi|308825871|emb|CBH21909.1| conserved protein of unknown function [Clostridium sticklandii] Length = 454 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 46/124 (37%), Gaps = 14/124 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C G + ++ D + + + + EV+ TG Sbjct: 162 KTRAFLKIQEGCDRFCSYCIIPYTRGPVRSRSIN--DIISEVKSLAKN-GYKEVVLTGIH 218 Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 L RL V+K + I + +R S V+P I + + LKE K Sbjct: 219 VASYGKDLGDIRLIDVIKAINNIDGIHRIRTSS----VEPLIITDDFLSELKEIDK---F 271 Query: 210 AIHA 213 H Sbjct: 272 CPHF 275 >gi|302389502|ref|YP_003825323.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646] gi|302200130|gb|ADL07700.1| Radical SAM domain protein [Thermosediminibacter oceani DSM 16646] Length = 463 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 5/126 (3%) Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMV 118 I +EL+ L + + L+G+ + + L L + H C + C++CF + Sbjct: 59 IIEAIKELDELKARGFLFVEADLTRALEGLRQKKNVKALCLNVAHDCNLRCKYCFASKGH 118 Query: 119 GSQKGTVLSSKDTEAALAYIQEKS---QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV 175 + + ++ K ++A+ ++ E S + EV F GG+PL+ ++ V+ R ++ Sbjct: 119 YNGERRLMDKKVAQSAVDFLIEHSGNLKNLEVDFFGGEPLMAFD-TIKYVISYARSLEDR 177 Query: 176 QILRFH 181 RFH Sbjct: 178 CGKRFH 183 >gi|291297888|ref|YP_003509166.1| molybdenum cofactor biosynthesis protein A [Stackebrandtia nassauensis DSM 44728] gi|290567108|gb|ADD40073.1| molybdenum cofactor biosynthesis protein A [Stackebrandtia nassauensis DSM 44728] Length = 341 Score = 41.2 bits (96), Expect = 0.21, Method: Composition-based stats. Identities = 40/192 (20%), Positives = 74/192 (38%), Gaps = 33/192 (17%) Query: 89 IVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQI 144 +V RY + + L C + C +C E + + +L+ + + + + Sbjct: 15 LVDRYGRTAVDLRVSLTDRCNLRCTYCMPAEGLAWLPRQEILTDDEIVRLVGLAVTRLGV 74 Query: 145 WEVIFTGGDPLILSHKRLQKVLKT---LRYIKHVQILR--FHSRVPIVDPQRINPELIQC 199 +V FTGG+PL+ L ++ L V + + R+ P Sbjct: 75 TQVRFTGGEPLLRPA--LADIVARTTALEPRPRVSLTTNAIGLK-------RMAP----A 121 Query: 200 LKEAGK-PVYIAIHANHPYEFSE--------EAIAAISRLANAG-IILLSQSVLLKGIND 249 L+EAG V I++ P F + + I+ AG + + SVL++G+N+ Sbjct: 122 LREAGLDRVNISLDTLDPARFKTLAHRDRLNDTVEGIAAAKAAGLVPVKVNSVLMRGVNE 181 Query: 250 DPEILANLMRTF 261 D E + L Sbjct: 182 D-EAVPLLRFAL 192 >gi|310658965|ref|YP_003936686.1| molybdopterin biosynthesis protein a [Clostridium sticklandii DSM 519] gi|308825743|emb|CBH21781.1| molybdopterin biosynthesis protein A [Clostridium sticklandii] Length = 316 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 63/163 (38%), Gaps = 21/163 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + +C C +C + +L ++ E + ++ I ++ TGG+PL+ Sbjct: 14 ISVTDLCNFNCEYCMPEGIEKKDHSDILRIEEIENICK-VAARNGIKKIRLTGGEPLV-- 70 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 K + ++ ++ I + + + + E+ + LK AG I + + E Sbjct: 71 RKGILSLINKIKSIDEITEVAITTNGV------LLDEMAKDLKAAGLD-RINLSLDSMDE 123 Query: 219 -----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 + E + +AG + +VL+ +ND+ Sbjct: 124 NVFRKITRGHELSEVYKGLESALDAGFENIKINTVLINKVNDN 166 >gi|331674993|ref|ZP_08375750.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli TA280] gi|331067902|gb|EGI39300.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli TA280] Length = 445 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|154503634|ref|ZP_02040694.1| hypothetical protein RUMGNA_01458 [Ruminococcus gnavus ATCC 29149] gi|260589858|ref|ZP_05855771.1| putative radical SAM domain protein [Blautia hansenii DSM 20583] gi|153795734|gb|EDN78154.1| hypothetical protein RUMGNA_01458 [Ruminococcus gnavus ATCC 29149] gi|260539665|gb|EEX20234.1| putative radical SAM domain protein [Blautia hansenii DSM 20583] Length = 463 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 45/77 (58%), Gaps = 5/77 (6%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFT 150 PD ++L L C + C++C+ + S G ++ + + A+ +I E + + + +IF Sbjct: 103 PDTVILMLCQECNLRCKYCYAGDGEYSNPG-IMKYEIGKKAIDFIAEFCGEKEQFNIIFF 161 Query: 151 GGDPLILSHKRLQKVLK 167 GG+PL + ++L+K+++ Sbjct: 162 GGEPL-MDFRKLKKLVE 177 >gi|117924283|ref|YP_864900.1| MiaB-like tRNA modifying enzyme [Magnetococcus sp. MC-1] gi|117608039|gb|ABK43494.1| MiaB-like tRNA modifying enzyme [Magnetococcus sp. MC-1] Length = 467 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 21/169 (12%) Query: 52 PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111 P P+ + + E LP E P+ + KG R +++ + C C F Sbjct: 136 PRTPLRQSGLEPLAEEAPLPRWEEGPLVAADA--FKG-----QARAFVQVQNGCDKRCTF 188 Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR------LQKV 165 C + G + A +++Q E++ TG D ++ L ++ Sbjct: 189 CVIPALRGPSRSQSPQWV-MAQAQSFLQA--GYQELVLTGIDLGSYGREQTGQGWSLARL 245 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 ++ L + + LR S +DP + P LI + A K + +H + Sbjct: 246 VEQLLSLDGLARLRLSS----IDPMDMEPALIALMGRAPK-LCPHLHLS 289 >gi|330995923|ref|ZP_08319818.1| tRNA methylthiotransferase YqeV [Paraprevotella xylaniphila YIT 11841] gi|329574262|gb|EGG55837.1| tRNA methylthiotransferase YqeV [Paraprevotella xylaniphila YIT 11841] Length = 447 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 36/189 (19%), Positives = 70/189 (37%), Gaps = 30/189 (15%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGI-VHRY--------PDRILLKLLHVCP 106 I R +E L +LP ER+ ++ + +H + R LK+ C Sbjct: 113 ILRY---LEERLPLLPAERKSADAEHAAYTVPTKDIHTFVPSCSCGDRTRYFLKVQDGCD 169 Query: 107 VYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKR 161 YC +C G + ++S + E A E++ TG GD + + Sbjct: 170 YYCTYCTIPYARGRSRNGSIASLVRQAEQA-----ASEGGREIVLTGVNIGDFGKTTGES 224 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEFS 220 ++K L ++ + R S ++P + +++ E+ H + P S Sbjct: 225 FLDLVKALDRVEGIARYRISS----IEPNLLTEDVLAFCAESR---AFMPHFHIPLQSGS 277 Query: 221 EEAIAAISR 229 +E + + R Sbjct: 278 DEVLKLMRR 286 >gi|320101749|ref|YP_004177340.1| 23S rRNA m(2)A-2503 methyltransferase [Isosphaera pallida ATCC 43644] gi|319749031|gb|ADV60791.1| 23S rRNA m(2)A-2503 methyltransferase [Isosphaera pallida ATCC 43644] Length = 400 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 35/206 (16%), Positives = 69/206 (33%), Gaps = 45/206 (21%) Query: 94 PDRILLKLLHVCPVYCRFC-------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 + + C + C FC R VG +L ++D + E ++ Sbjct: 129 RRTVCVSSQVGCGMGCVFCASGLKGVERNLTVGEITEELLHARDL------LPEHERLTN 182 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVDPQRINPELIQC 199 ++ G + S L+ ++ L I + + + + P++I + + Sbjct: 183 IVVMG---MGESLANLENLIAALDRICSPSGLGLSQRAVTIST---VGLPEKI--KRLAA 234 Query: 200 LKEAGKPVYIAIH------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 L + + +++H NH AA A G + + VLL GI Sbjct: 235 L-DRRYHLAVSLHAPTEELRDQLVPINHKVGLRAVMEAADHYFAVTGRQVTFEYVLLGGI 293 Query: 248 NDDPEILANLMRTF--VELRI--KPY 269 ND +L+ + + PY Sbjct: 294 NDRDRDARDLVALLAGRKAHVNLIPY 319 >gi|168334360|ref|ZP_02692544.1| molybdopterin cofactor biosynthesis protein A, putative [Epulopiscium sp. 'N.t. morphotype B'] Length = 299 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 39/161 (24%), Positives = 68/161 (42%), Gaps = 27/161 (16%) Query: 101 LLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C VG+ K L+ + E +A I I +V TGG+PLI S Sbjct: 1 MTNRCNLKCIYC-----VGADKFEAKYLTIDEIER-VANIFATLGITKVKLTGGEPLIRS 54 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 L ++K LR V+ + + + + + L AG I + + Sbjct: 55 D--LANIVKRLRSAGMVE-VTLTTNGL------LLEQKLTTLIAAGVT-AINVSLDAIDG 104 Query: 219 FSEEA---IAAISRLANA------GIILLSQSVLLKGINDD 250 + EA +AA++++ A + S+L+KG ND Sbjct: 105 ATFEALTGVAAVNKVMQAVEASAKVVPTKINSLLIKGTNDS 145 >gi|289423981|ref|ZP_06425773.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L] gi|289155617|gb|EFD04290.1| radical SAM domain protein [Peptostreptococcus anaerobius 653-L] Length = 380 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 42/117 (35%), Gaps = 13/117 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + CP C FC ++++ G + +L I + +++ F G Sbjct: 8 IFVPHQGCPHDCIFCNQKKITGLSTSMTDEDARDIIIESLKTIPDDAEVEIAFFGGS--F 65 Query: 156 ILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 ++L V K + + V +R +R P I+ + LKE G + Sbjct: 66 TAIDTDIQRKLLSVAKDFKDMGKVDDIRLSTR-----PDCIDDRELDLLKEYGVTII 117 >gi|218691787|ref|YP_002399999.1| coproporphyrinogen III oxidase [Escherichia coli ED1a] gi|218429351|emb|CAR10315.2| putative oxygen independent coproporphyrinogen III oxidase (chuW-like) [Escherichia coli ED1a] Length = 445 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEREADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|218702268|ref|YP_002409897.1| coproporphyrinogen III oxidase [Escherichia coli IAI39] gi|218372254|emb|CAR20116.1| putative oxygen independent coproporphyrinogen III oxidase (chuW-like) [Escherichia coli IAI39] Length = 445 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|319651610|ref|ZP_08005737.1| hypothetical protein HMPREF1013_02349 [Bacillus sp. 2_A_57_CT2] gi|317396677|gb|EFV77388.1| hypothetical protein HMPREF1013_02349 [Bacillus sp. 2_A_57_CT2] Length = 450 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 49/128 (38%), Gaps = 19/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C FC G + + + A + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDPKEVIRQAQQLVDA--GYKEIVLTGIH 198 Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + L +L+ L +K ++ LR S ++ +I E+I+ + ++ K Sbjct: 199 TGGYGED---MKDYNLAMLLRDLEAQVKGLKRLRISS----IEASQITDEVIEVMDQS-K 250 Query: 206 PVYIAIHA 213 V +H Sbjct: 251 VVVRHLHI 258 >gi|307298742|ref|ZP_07578545.1| MiaB-like tRNA modifying enzyme [Thermotogales bacterium mesG1.Ag.4.2] gi|306915907|gb|EFN46291.1| MiaB-like tRNA modifying enzyme [Thermotogales bacterium mesG1.Ag.4.2] Length = 425 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 18/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGS----QKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R L + C C +C R + K L ++ E ++ E++ Sbjct: 132 RTRAFLGIEDGCLNCCSYC-RVRLARGSKIISKPIDLVKREFEGLVS-----RGYREIVL 185 Query: 150 TGGDPLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L K+L L ++ +R S +DP R++ EL+ + + + Sbjct: 186 TGINIGYYGFDLDSSLVKLLIELDKLEGEWRIRLGS----LDPDRVDGELLHLITTSRR- 240 Query: 207 VYIAIHAN 214 + +H + Sbjct: 241 MARHLHLS 248 >gi|291529131|emb|CBK94717.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale M104/1] Length = 434 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 32/162 (19%) Query: 70 LPEEREDPIGDNNHSPLKGIVH----------RYPDRILLKLLHVCPVYCRFCFRREMVG 119 L E D + D G H + R +K+ C +C +C G Sbjct: 109 LEEYSLDSVNDTVDDINDG-KHDFEELFIDQTKEHTRAFIKVQDGCNQFCSYCIIPYARG 167 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRY 171 + ++ A + + EV+ TG LS L ++++ + Sbjct: 168 RVRSRRF--ENVIAEVERLAAN-GFKEVVLTGI---HLSSYGVDFEEATGLLELIQAVNA 221 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 +K ++ +R S ++P+ + L + K I H Sbjct: 222 VKGIERIRLGS----LEPKIVTEHFASELSKLDK---ICPHF 256 >gi|291525036|emb|CBK90623.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale DSM 17629] Length = 434 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 32/162 (19%) Query: 70 LPEEREDPIGDNNHSPLKGIVH----------RYPDRILLKLLHVCPVYCRFCFRREMVG 119 L E D + D G H + R +K+ C +C +C G Sbjct: 109 LEEYSLDSVNDTVDDINDG-KHDFEELFIDQTKEHTRAFIKVQDGCNQFCSYCIIPYARG 167 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRY 171 + ++ A + + EV+ TG LS L ++++ + Sbjct: 168 RVRSRRF--ENVIAEVERLAAN-GFKEVVLTGI---HLSSYGVDFEEATGLLELIQAVNA 221 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 +K ++ +R S ++P+ + L + K I H Sbjct: 222 VKGIERIRLGS----LEPKIVTEHFASELSKLDK---ICPHF 256 >gi|269957895|ref|YP_003327684.1| Radical SAM domain-containing protein [Xylanimonas cellulosilytica DSM 15894] gi|269306576|gb|ACZ32126.1| Radical SAM domain protein [Xylanimonas cellulosilytica DSM 15894] Length = 376 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 14/119 (11%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIF 149 R P + +L C + CR C R E V L+++ A L IQ + V+ Sbjct: 25 QRSPMIVYWELTTACGLACRHC-RAEAVRQPLPGELTTRQALAVLDQIQGFGDPLPHVVM 83 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILR-FH-SRVPIVDPQRINPELIQCLKEAGKP 206 TGGDPL + L ++ R S P V P +N + ++ L+E+G Sbjct: 84 TGGDPLRRAD--LDLLIDAATE-------RGIGVSLAPAVTP-LLNRDRLEGLRESGVQ 132 >gi|154685441|ref|YP_001420602.1| coproporphyrinogen III oxidase [Bacillus amyloliquefaciens FZB42] gi|154351292|gb|ABS73371.1| HemZ [Bacillus amyloliquefaciens FZB42] Length = 500 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 39/233 (16%), Positives = 78/233 (33%), Gaps = 45/233 (19%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------ 131 I D + + + + + + CP C +C + + S Sbjct: 154 IVDRQLAAVPDLYRVKDEVSIYIGIPFCPTKCAYCTFPAYAIQGQAGRVGSFLWGLHYEM 213 Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189 + +++ ++ + F GG P ++ + + + + + R V +R + V P Sbjct: 214 QKIGEWLKRHDIKVTTIYFGGGTPTSITAEEMDLLYEEMVRSFPDVANIREIT-VEAGRP 272 Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 I E + L + + I P + E + AI R +V Sbjct: 273 DTITEEKLAVLNKYKIDRISIN-----PQSYENETLKAIGR---------HHTV------ 312 Query: 249 DDPEILAN--LMRTFVELRIKPYYLHHPDLA-----AGTSHFRLTIEEGQKIV 294 E + L R I + DL GT+ FR ++EE +K++ Sbjct: 313 --EETIEKYHLSRKHGMNNI------NMDLIIGLPGEGTAEFRHSLEETEKLM 357 >gi|153873510|ref|ZP_02002070.1| radical SAM family protein [Beggiatoa sp. PS] gi|152070023|gb|EDN67929.1| radical SAM family protein [Beggiatoa sp. PS] Length = 356 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 36/168 (21%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEV 147 YP +++ + C + C++CF Q+ + + LA I+E +S+I Sbjct: 9 YPSVVVVNITTACNLRCKYCFADCEPSQQREDMTE----DVMLAIIREMLVLPESEIITF 64 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI-----KHVQILRFHSRVPIVDPQRINPELIQCLKE 202 F GG+P L+ +++ + + K V+ R S + I ELI LK+ Sbjct: 65 EFQGGEP-TLNIVGIERFISIAEQLKTSSNKTVKY-RIESNGTV-----ITDELITLLKK 117 Query: 203 AGKPVYIAIHANHPYEFSEEAI-------------AAISRLANAGIIL 237 + I I + P + + A I +L GI + Sbjct: 118 Y--NMEIGISIDGPMDMTNNARVYEDGTGAFTDIENGIKKLHENGIKV 163 >gi|28804570|dbj|BAC57983.1| hypothetical protein [Leptospira interrogans] Length = 264 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 29/160 (18%) Query: 56 IARQFIPQKEELNILPEEREDPIGD--NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC- 112 I R+ P EL+ E D + + S ++ Y +K+ C C FC Sbjct: 93 ILREKFP---ELSPSQLEFNDSLLERWKLSSKIENYSKPY---AYVKVSDGCNRGCSFCI 146 Query: 113 ---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKV 165 FR + V S +L +DT A+ +I + ++ G D + L + Sbjct: 147 IPSFRGKFVESPLDDIL--RDTNRAIR--AGAKEICLVSQDTVYYGRDS-----EILLDM 197 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 ++ + I ++ILR + P + +LI+ + E K Sbjct: 198 VRKVAEIDSLEILRL----LYLYPDKKTEKLIRLMGETSK 233 >gi|194334092|ref|YP_002015952.1| radical SAM domain-containing protein [Prosthecochloris aestuarii DSM 271] gi|194311910|gb|ACF46305.1| Radical SAM domain protein [Prosthecochloris aestuarii DSM 271] Length = 346 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 26/163 (15%), Positives = 65/163 (39%), Gaps = 25/163 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 ++L + C + C +C+ E G +S + E A+ + + + + +GG+PL+ Sbjct: 9 LILVVTRSCNLSCVYCY--ENACRHDGAAMSLQTAEQAVGLVAASGKPFHIQLSGGEPLL 66 Query: 157 LSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 ++++ + I + + + ++ E+I+ L G + +++ + Sbjct: 67 APDTIFAVMELIRK-KGIP--AFVSLQTNGVL-----LDREMIRSLNGYGVSIGLSL--D 116 Query: 215 HPYEFSEEAI-------AAISRLANAGIILLSQSVLLKGINDD 250 P EE A+ L + G+ +V ++D Sbjct: 117 GPPRLQEELRGGSAATYRALRLLEDEGVPFRVTTV----VSDC 155 >gi|110638137|ref|YP_678346.1| 2-methylthioadenine synthetase [Cytophaga hutchinsonii ATCC 33406] gi|110280818|gb|ABG59004.1| possible 2-methylthioadenine synthetase [Cytophaga hutchinsonii ATCC 33406] Length = 438 Score = 41.2 bits (96), Expect = 0.22, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 35/160 (21%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C C FC GS + ++ + I + E++ TG Sbjct: 140 RTRTFLKVQDGCDYSCSFCTIPLARGSSRSDTIA--NIVKTAKEIAA-KDVKEIVLTGVN 196 Query: 152 -GDPLILS----HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 GD I+S L ++K L ++ ++ R S ++P + E+I + + + Sbjct: 197 IGDYGIISGTRTTSFLD-LIKELDKVEGIERFRISS----IEPNLLTDEIISFVSTSRR- 250 Query: 207 VYIAIHANHP-----------------YEFSEEAIAAISR 229 H + P E E + AI + Sbjct: 251 --FVPHFHIPLQSGNDKILKLMRRRYKRELYAERVEAIKK 288 >gi|296328080|ref|ZP_06870614.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] gi|296154856|gb|EFG95639.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium nucleatum subsp. nucleatum ATCC 23726] Length = 348 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 15/124 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKS--QIWEVI 148 ++ + + CP C FC ++++ G + +S D + + Y++ I +V Sbjct: 2 KHYNIPVFISHFGCPNACVFCNQKKINGRETD--VSLDDLKNIIDSYLKTLPKNSIKQVA 59 Query: 149 FTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG L ++ L+ ++ I + V+ +R +R P+ I+ E++ LK+ G Sbjct: 60 FFGG-TFTGISINLQKEYLEVVKKYIDNNDVEGVRISTR-----PECIDDEILTQLKKYG 113 Query: 205 KPVY 208 Sbjct: 114 VKTI 117 >gi|168700820|ref|ZP_02733097.1| Radical SAM [Gemmata obscuriglobus UQM 2246] Length = 277 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 30/176 (17%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCF-----RREMVGSQKGTVLSSKDTEAALAYI 138 SP G + R C C +C+ + ++ G +++K AALA Sbjct: 11 SPATGFIRRGGFEWTCNPYVGCTFGCTYCYAAFLPQNRRPANEWGKWITAKKNAAALAEK 70 Query: 139 QEKSQIWEVIF--TGGDP-------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 Q + ++ + DP L+L+ L+ +L H L +R P+V Sbjct: 71 QATKVAGQPVYLSSVTDPYQPAERSLMLTRGILEALL------PHQPRLTIQTRGPLVV- 123 Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPY-EFSEEAI------AAISRLANAGIILL 238 R + ++++ + V I + +F +A A+ +L +AG+ + Sbjct: 124 -R-DIDVLKDFRSLRVNVSIPTDSERVRQQFEPKAPPLEGRWDAVQQLKDAGVSVG 177 >gi|187924899|ref|YP_001896541.1| molybdenum cofactor biosynthesis protein A [Burkholderia phytofirmans PsJN] gi|187716093|gb|ACD17317.1| molybdenum cofactor biosynthesis protein A [Burkholderia phytofirmans PsJN] Length = 369 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + +LS ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYTFLPHSALLSFEEIERLARLFVAH-GVEKIRLTGGE 99 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K L+ +++ L + Sbjct: 100 PLL--RKNLEFLIERLAQL 116 >gi|295677201|ref|YP_003605725.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. CCGE1002] gi|295437044|gb|ADG16214.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. CCGE1002] Length = 369 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + +LS ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYAFLPHSALLSFEEIERLAQQFVAH-GVEKIRLTGGE 99 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K L+ ++ L + Sbjct: 100 PLL--RKNLEFLIDRLARL 116 >gi|206890348|ref|YP_002249124.1| AstB/chuR-related protein [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742286|gb|ACI21343.1| AstB/chuR-related protein [Thermodesulfovibrio yellowstonii DSM 11347] Length = 405 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 17/100 (17%) Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR----------REMVGSQKGTVLSSKDT 131 SP+ + RY + L++ + C + C+ CF V K LS + Sbjct: 87 EQSPIPSL--RYLE---LQITNRCNLRCKHCFVNSGTCQKKKFSHFVDIDKSQELSFEKI 141 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSH-KRLQKVLKTLR 170 + L ++ + V+ TGG+PL+ S K++ +K L Sbjct: 142 KKTLKEFEKMQGLR-VLITGGEPLLHSEFKKINNFIKDLA 180 >gi|170680480|ref|YP_001745771.1| coproporphyrinogen III oxidase [Escherichia coli SMS-3-5] gi|170518198|gb|ACB16376.1| putative coproporphyrinogen III oxidase [Escherichia coli SMS-3-5] Length = 445 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|157960282|ref|YP_001500316.1| radical SAM domain-containing protein [Shewanella pealeana ATCC 700345] gi|157845282|gb|ABV85781.1| Radical SAM domain protein [Shewanella pealeana ATCC 700345] Length = 294 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 84/233 (36%), Gaps = 48/233 (20%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 ++L++ + C C FC + + K + ++ ++ I V GD + Sbjct: 18 LILQVTNGCSWNQCSFCDMYTQPQKRFRAQKADKIEQDLISVANSQAHISRVFLADGDAM 77 Query: 156 ILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKPVYIA 210 L RL+ + ++ + +V +R+ P+ I PE +Q L+E G + Sbjct: 78 TLPFARLEAICLLIKKYLPNV------TRISSYCLPRNINNKTPEQLQRLRELGLSLLYI 131 Query: 211 IHANHPYEFSEEAIA---------AISRLANAGI----ILLSQSVLLKGIN---DDPEIL 254 + E E A+ ++ AGI ++L+ L G+ E Sbjct: 132 GCESGDDEVLERIKKGETFDSSLAALQKIKAAGIKASVMILN---GLAGVELSKQHAENS 188 Query: 255 ANLMRTFVELRIKPYYLHHPDLA--AGTS--------HFRLTIEEGQKIVASL 297 A LM +P YL + GT HF+L + ++ + Sbjct: 189 AKLMNA-----AQPEYLSTLVVTLPLGTERMDEAFGGHFQLPNQ--AQLFEEM 234 >gi|331089440|ref|ZP_08338339.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae bacterium 3_1_46FAA] gi|330404808|gb|EGG84346.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae bacterium 3_1_46FAA] Length = 440 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 10/113 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 LK+ C +C +C + +V + + A + E+ ++ L Sbjct: 146 AYLKIAEGCDKHCTYCII-PKIRGNFRSVPMERLIKEAKE-LAEQGVKELILVAQETTLY 203 Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 K L ++++ L I ++ +R P+ I ELI+ +K+ K Sbjct: 204 GKDLYGEKCLHRLVEELCKIAGIRWIRI----LYCYPEEITDELIEVIKKEPK 252 >gi|304384048|ref|ZP_07366503.1| 2-methylthioadenine synthetase [Prevotella marshii DSM 16973] gi|304334836|gb|EFM01111.1| 2-methylthioadenine synthetase [Prevotella marshii DSM 16973] Length = 443 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C + E A + E++ TG + Sbjct: 153 RTRYFLKVQDGCDYFCTYCTI-PFARGRSRNPSIESLVEQAET--AARQGGKEIVLTGVN 209 Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 S L +++KTL ++ +Q R S ++P ++ ELI E+ Sbjct: 210 IGEFSTAEGLGLLELVKTLDCVEGIQRFRISS----IEPDLLDDELIAYCAESR---AFM 262 Query: 211 IHA 213 H Sbjct: 263 PHF 265 >gi|210622624|ref|ZP_03293284.1| hypothetical protein CLOHIR_01232 [Clostridium hiranonis DSM 13275] gi|210154125|gb|EEA85131.1| hypothetical protein CLOHIR_01232 [Clostridium hiranonis DSM 13275] Length = 445 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 26/126 (20%) Query: 92 RYPDR----ILLKLLHVCPVYCRFC--------FRREMVGS--QKGTVLSSKDTEAALAY 137 RY LK+ C +C +C +R + ++ L+++ + + Sbjct: 138 RYVSTPEHMAYLKIGEGCSNHCTYCIIPKLRGKYRSRKIEDIVEEAKTLAAEGVKELVV- 196 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197 I + + G D + +L ++L+ L I+ ++ +R P+ I +LI Sbjct: 197 IAQ-----DTTRYGED--LYGEAKLAELLEELAGIEGIKWIRI----MYSYPESITEKLI 245 Query: 198 QCLKEA 203 + Sbjct: 246 DVIAAH 251 >gi|317500459|ref|ZP_07958683.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium 8_1_57FAA] gi|316898214|gb|EFV20261.1| MiaB family RNA modification enzyme [Lachnospiraceae bacterium 8_1_57FAA] Length = 440 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 43/113 (38%), Gaps = 10/113 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 LK+ C +C +C + +V + + A + E+ ++ L Sbjct: 146 AYLKIAEGCDKHCTYCII-PKIRGNFRSVPMERLIKEAKE-LAEQGVKELILVAQETTLY 203 Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 K L ++++ L I ++ +R P+ I ELI+ +K+ K Sbjct: 204 GKDLYGEKCLHRLVEELCKIAGIRWIRI----LYCYPEEITDELIEVIKKEPK 252 >gi|281180540|dbj|BAI56870.1| putative coproporphyrinogen oxidase [Escherichia coli SE15] Length = 445 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 62/165 (37%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSGPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|7963892|gb|AAF71374.1|AF262989_1 iron-sulfur modifier protein [Klebsiella pneumoniae] Length = 395 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 48/233 (20%), Positives = 86/233 (36%), Gaps = 36/233 (15%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKL-LHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAA 134 P+ SP+ +H IL+K C + CR+C+ + + E Sbjct: 13 PLAAEPRSPVP--LH-----ILMKPIGPACNLACRYCY---YPQDETPVNKMDDARLEQF 62 Query: 135 L-AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVD 188 + YI + +I ++ GG+PL+ +K L RY + S + Sbjct: 63 IRRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTN 118 Query: 189 PQRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V-- 242 IN + +E G + +++ N + + S + A GI LL Q V Sbjct: 119 GTLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVGF 178 Query: 243 -LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 LL + N+ A + V L + Y P ++ G + + EG ++ Sbjct: 179 NLLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225 >gi|297569896|ref|YP_003691240.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296925811|gb|ADH86621.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 355 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 39/216 (18%), Positives = 73/216 (33%), Gaps = 35/216 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + ++ C + C C + +++ S + + L I + V+ +GG+ Sbjct: 5 PKWLAWEITRRCNLNCVHCRSSSELEAKEHPDFSFDEAKRILDDIASYASP-VVVLSGGE 63 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL L+ + + + LR + +N ++ + LKEAG + Sbjct: 64 PL------LRDDVFEIAAYGTGKGLRMC---LATNGTLVNEQVCRRLKEAGIRMVSLSLD 114 Query: 209 -----IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 + + N P F I A I L S K + + + R Sbjct: 115 GADATVHDNFRNQPGAFDG-TINAARLFKEHDIPFLINSSFTK---RNQAEIPKVYRLAK 170 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 EL K +Y+ + G+ I+A L Sbjct: 171 ELGAKAWYMFM----------IVPTGRGEDIMAELI 196 >gi|196232689|ref|ZP_03131540.1| Radical SAM domain protein [Chthoniobacter flavus Ellin428] gi|196223149|gb|EDY17668.1| Radical SAM domain protein [Chthoniobacter flavus Ellin428] Length = 368 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 8/80 (10%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 +VC VYC+FC + VLS + + L + + ++ G P + Sbjct: 76 TNVCNVYCKFCAFYRTEKDEDHYVLSHEQLDQKLDELSAIGGVQILLQGGHHPKL----D 131 Query: 162 LQKVLKTLRYI----KHVQI 177 + L L +I H+ I Sbjct: 132 IDWYLAMLSHIREKYPHINI 151 >gi|7963896|gb|AAF71376.1|AF262990_1 iron-sulfur modifier protein [Klebsiella pneumoniae] Length = 395 Score = 41.2 bits (96), Expect = 0.23, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 83/232 (35%), Gaps = 34/232 (14%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135 P+ SP+ + P + C + CR+C+ + + E + Sbjct: 13 PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDETPVNKMDDARLEQFI 63 Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189 YI + +I ++ GG+PL+ +K L RY + S + Sbjct: 64 RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119 Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242 IN + +E G + +++ N + + S + A GI LL Q V Sbjct: 120 TLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVGFN 179 Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 LL + N+ A + V L + Y P ++ G + + EG ++ Sbjct: 180 LLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225 >gi|289422296|ref|ZP_06424147.1| putative oxygen-independent coproporphyrinogen III oxidase [Peptostreptococcus anaerobius 653-L] gi|289157301|gb|EFD05915.1| putative oxygen-independent coproporphyrinogen III oxidase [Peptostreptococcus anaerobius 653-L] Length = 378 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 46/116 (39%), Gaps = 9/116 (7%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGGD 153 ++ + + C C +C VG + E + Y+ +K I+ + GG Sbjct: 4 NKAIYIHIPFCAKKCYYCDFTSYVGRDEEINSYLDSLEKEMDLYMDKKEDIYSIFIGGGT 63 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL---RFHSRVPIVDPQRINPELIQCLKEAGKP 206 P +LS +L ++ + +++ L S +P + + ++ +K+ G Sbjct: 64 PSLLSPDQLDRLFGIIEKKVNLESLCEYTIES-----NPGTLTRDKLRTMKKHGVN 114 >gi|288555141|ref|YP_003427076.1| hypothetical protein BpOF4_10655 [Bacillus pseudofirmus OF4] gi|288546301|gb|ADC50184.1| hypothetical protein BpOF4_10655 [Bacillus pseudofirmus OF4] Length = 370 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 16/119 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +C + C C + + T L + + + E + TGG+P +LS Sbjct: 34 FTTTTLCNMRCEHCAVGYTLQHKDPTPLP---LDLLIMRLDEIPHLKAFSITGGEP-MLS 89 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215 K + + + L H + +R +IN L LK K P +H +H Sbjct: 90 MKSVDQYVVPLLKYAHERGVR----------TQINSNLTLDLKRYEKIIPYLDVLHISH 138 >gi|260892512|ref|YP_003238609.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4] gi|260864653|gb|ACX51759.1| RNA modification enzyme, MiaB family [Ammonifex degensii KC4] Length = 437 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 23/116 (19%), Positives = 45/116 (38%), Gaps = 16/116 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152 R LK+ C +C +C V + +AA ++QE E++ TG Sbjct: 147 RTRAFLKVQEGCRDFCTYCI-VPYVRGPCRSRPLEAVLKAARRFLQE--GFVELVLTGTH 203 Query: 153 ------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 D + L +++ L ++ LR S ++P + +LI+ ++ Sbjct: 204 LGLYGQD--LTPSLTLAHLVERLLEFPELKRLRLSS----IEPLEVTADLIELMRR 253 >gi|163783641|ref|ZP_02178630.1| predicted glycyl radical activating enzyme [Hydrogenivirga sp. 128-5-R1-1] gi|159881134|gb|EDP74649.1| predicted glycyl radical activating enzyme [Hydrogenivirga sp. 128-5-R1-1] Length = 209 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 14/85 (16%), Positives = 37/85 (43%), Gaps = 3/85 (3%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ + C CR C +V ++ ++ ++ L + I ++ +GG+P + Sbjct: 21 LVLFMKGCNFRCRHCHNWRLVVGEEKEEITEREV---LYEVSSNPVIDTLVLSGGEPTVH 77 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182 + K+L + ++ + +R + Sbjct: 78 NPKKLMDFILRVKSRNPLIKIRVDT 102 >gi|324326187|gb|ADY21447.1| molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar finitimus YBT-020] Length = 337 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G+ + +LS + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGADYAFLQEEFLLSFDEIERLARLFIGM-GVEKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L +++ L ++ ++ + + + Q + LKEAG K V I++ Sbjct: 77 PLLRKD--LSQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKTLKEAGLKRVNISLD 128 Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H N ++ + I G+ + V+ KG+ND Sbjct: 129 AIEDHVFQTINGRNVSTKPVLKGIEAAKAIGLEVKVNMVVKKGMNDS 175 >gi|238619042|ref|YP_002913867.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4] gi|238380111|gb|ACR41199.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4] Length = 394 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 17/116 (14%) Query: 69 ILPEEREDPIGDNNHSPLKGIVH------RYPDRIL---LKLLHVCPVYCRFCFRREMVG 119 I+PE +D I + + + + R P +L L L + C C +CF++ G Sbjct: 37 IVPEHLKDIIEEGFSAADEDLEEEIDKFLRKP--VLEPTLVLTYNCNFDCIYCFQK---G 91 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173 +K +S K + YI++ + +V T GG+PL L ++++++ + L +K Sbjct: 92 FRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146 >gi|227826907|ref|YP_002828686.1| radical SAM protein [Sulfolobus islandicus M.14.25] gi|227458702|gb|ACP37388.1| Radical SAM domain protein [Sulfolobus islandicus M.14.25] Length = 394 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 56/116 (48%), Gaps = 17/116 (14%) Query: 69 ILPEEREDPIGDNNHSPLKGIVH------RYPDRIL---LKLLHVCPVYCRFCFRREMVG 119 I+PE +D I + + + + R P +L L L + C C +CF++ G Sbjct: 37 IVPEHLKDIIEEGFSAADEDLEEEIDKFLRKP--VLEPTLVLTYNCNFDCIYCFQK---G 91 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173 +K +S K + YI++ + +V T GG+PL L ++++++ + L +K Sbjct: 92 FRKNVSVSDKVIRGFVNYIRKNERGRKVRITYFGGEPL-LQLRKIEEISRELSDLK 146 >gi|168335412|ref|ZP_02693503.1| MiaB-like tRNA modifying enzyme YliG [Epulopiscium sp. 'N.t. morphotype B'] Length = 446 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 43/108 (39%), Gaps = 10/108 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +K+ C +C +C + G + + K E + + E + E+I + + Sbjct: 149 AYIKIAEGCNSHCTYCIIPSLRGQYR-SRPKEKIVEEVMQ-LAED-GVSEIILVAQNTTM 205 Query: 157 LSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + L +L+ L I ++ +R P+ I ELI+ +K Sbjct: 206 YGIDKGYTLTNLLQELSDIDGIEWIRI----LYCYPENITDELIEEIK 249 >gi|257063746|ref|YP_003143418.1| MiaB-like tRNA modifying enzyme [Slackia heliotrinireducens DSM 20476] gi|256791399|gb|ACV22069.1| MiaB-like tRNA modifying enzyme [Slackia heliotrinireducens DSM 20476] Length = 409 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 43/122 (35%), Gaps = 9/122 (7%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 +P R+ +K+ C C FC + + + A Y + + E++ TG Sbjct: 139 FPTRVGIKVQDGCNNACTFCI-VHVARGRAWSRPYKDVVAEAGEY--ARRGVREIVLTGI 195 Query: 153 D--PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + L ++L L R S V+P ++ + I + + + Sbjct: 196 NLGAYRTEDADLVRLLDGLLEAAPNTRFRLSS----VEPHTLSDDFIGLMAASDGRICRH 251 Query: 211 IH 212 +H Sbjct: 252 LH 253 >gi|167770639|ref|ZP_02442692.1| hypothetical protein ANACOL_01985 [Anaerotruncus colihominis DSM 17241] gi|167667234|gb|EDS11364.1| hypothetical protein ANACOL_01985 [Anaerotruncus colihominis DSM 17241] Length = 457 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 6/87 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF ++S + AA+ Y+ + S EV GG+PL Sbjct: 101 LHIAHDCNLRCKYCFADTGEYMGHRELMSPETGRAAIDYLIDHSAGRHNLEVDLFGGEPL 160 Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180 ++ + +++V++ R ++ H ++ RF Sbjct: 161 -MNFETVREVVRYARSLEKKHGKLFRF 186 >gi|126652827|ref|ZP_01724972.1| Fe-S oxidoreductase [Bacillus sp. B14905] gi|126590363|gb|EAZ84483.1| Fe-S oxidoreductase [Bacillus sp. B14905] Length = 449 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 13/125 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149 R LK+ C +C FC G + + + Y++ Sbjct: 147 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPQEVLHQAQQLVDAGYLEIVLTGIHTGG 206 Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 G D L L ++L+ L +K ++ LR S ++ ++ E+I L+E+ K V Sbjct: 207 YGQD---LKDYNLAQLLRDLEANVKGLKRLRISS----IEASQLTDEVIDVLRES-KIVV 258 Query: 209 IAIHA 213 +H Sbjct: 259 NHLHI 263 >gi|307244383|ref|ZP_07526494.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678] gi|306492202|gb|EFM64244.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678] Length = 462 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQK---GTVLSSKDTEAALAYIQEKSQIWEVI 148 R P ++LL+L + C + C CF + LS +D + I + ++E++ Sbjct: 122 RSPLKVLLELTYSCNLRCIHCFADADFCCENRMVQNELSYEDWCKIIDNIIKN-DVFEIL 180 Query: 149 FTGGDPLILSHKRLQ 163 +GG+ + ++ Sbjct: 181 LSGGEA-TMRDDLIK 194 >gi|315502559|ref|YP_004081446.1| miab-like tRNA modifying enzyme ylig [Micromonospora sp. L5] gi|315409178|gb|ADU07295.1| MiaB-like tRNA modifying enzyme YliG [Micromonospora sp. L5] Length = 500 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 57/166 (34%), Gaps = 33/166 (19%) Query: 81 NNHSPLKG---IVHRYPD--RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDT 131 + H+P + HR LKL C C FC FR V +L+ + Sbjct: 169 DAHTPAHLRQVLRHRLDTGPVASLKLASGCDRRCAFCAIPAFRGAFVSRTPDELLAEAEW 228 Query: 132 EAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 A K+ + E++ G D + + L+K+L L I + +R Sbjct: 229 LA-------KTGVRELVLVSENSTSYGKD--LGDPRALEKLLPQLAAIDGIVRVR----A 275 Query: 185 PIVDPQRINPELIQCLKEA-GKPVYIAIHANHPYEFSEEAIAAISR 229 + P P L++ + G Y + H E + + R Sbjct: 276 SYLQPAETRPGLVEVIATTPGVAAYFDLSFQHSSE---PVLRRMRR 318 >gi|229829019|ref|ZP_04455088.1| hypothetical protein GCWU000342_01104 [Shuttleworthia satelles DSM 14600] gi|229792182|gb|EEP28296.1| hypothetical protein GCWU000342_01104 [Shuttleworthia satelles DSM 14600] Length = 449 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 36/210 (17%), Positives = 75/210 (35%), Gaps = 47/210 (22%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 LL C C FCF + + T+ D + L+++Q V T + Sbjct: 86 LLDDYRSCSNACLFCFIDQNPPGMRKTIYFKDD-DTRLSFLQGN----YVTLT-----NM 135 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 + + +++ ++ + + V +P L+E +H Sbjct: 136 KEEEIDRLIA--YRMEPINV-----SVQATEP---------LLREK------MLH----N 169 Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLA 277 F+ + + + +L +A I + Q VL KG+ND + + PY + Sbjct: 170 RFAGQLMDKLKKLYDAEISMNGQVVLCKGLNDKEHLDRTIKDLLSFY---PYMGTLSVVP 226 Query: 278 AGTSHFRLTI--------EEGQKIVASLKE 299 G + FR + E+ +++V ++ Sbjct: 227 VGLTRFRQGLYPLKPFKKEDAREVVEQIRR 256 >gi|171909566|ref|ZP_02925036.1| hypothetical protein VspiD_00300 [Verrucomicrobium spinosum DSM 4136] Length = 320 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 17/130 (13%) Query: 89 IVHRYPDRILLKL------LHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEK 141 + H R+ L +C CRFC R + +S L + + Sbjct: 37 LQHDARTRVPLFAKLELSLTGLCNRKCRFCPRSDASFFPNVNEHMSDALLHGMLDELAQA 96 Query: 142 SQIWEVIFTG-GDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQC 199 V +G G+PL+ R+++++ T+ + H +I + + R+ L + Sbjct: 97 GWKGTVSLSGFGEPLLHP--RIREIVGTIHRVLPHARI------EMVSNGDRLTAGLARD 148 Query: 200 LKEAGKPVYI 209 L +AG V + Sbjct: 149 LFDAGLHVLV 158 >gi|168184612|ref|ZP_02619276.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf] gi|237795842|ref|YP_002863394.1| MiaB family RNA modification protein [Clostridium botulinum Ba4 str. 657] gi|182672297|gb|EDT84258.1| RNA modification enzyme, MiaB family [Clostridium botulinum Bf] gi|229260716|gb|ACQ51749.1| RNA modification enzyme, MiaB family [Clostridium botulinum Ba4 str. 657] Length = 445 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 27/135 (20%) Query: 91 HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 H+Y D RIL + C +C +C + G + ++ + Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184 Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + ++ + E+I D + K L ++L+ + +K V+ +R P+ Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVKGVKWIRL----LYCYPE 239 Query: 191 RINPELIQCLKEAGK 205 I ELI+ +K K Sbjct: 240 EITNELIEEIKSNDK 254 >gi|152969099|ref|YP_001334208.1| putative iron-sulfur modifier protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|329998396|ref|ZP_08303095.1| anaerobic sulfatase maturase [Klebsiella sp. MS 92-3] gi|150953948|gb|ABR75978.1| putative iron-sulfur modifier protein [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gi|328538696|gb|EGF64788.1| anaerobic sulfatase maturase [Klebsiella sp. MS 92-3] Length = 395 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 48/234 (20%), Positives = 85/234 (36%), Gaps = 38/234 (16%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD---TEA 133 P+ SP+ + P + C + CR+C Q T ++ D E Sbjct: 13 PLAAEPRSPVPFHILMKP------IGPACNLACRYC-----YYPQDETSVNKMDDARLEQ 61 Query: 134 AL-AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIV 187 + YI + +I ++ GG+PL+ +K L RY + S Sbjct: 62 FIRRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQT 117 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V- 242 + IN + +E G + +++ N + + S + A GI LL Q V Sbjct: 118 NGTLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVD 177 Query: 243 --LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 LL + N+ A + V L + Y P ++ G + + EG ++ Sbjct: 178 FNLLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225 >gi|317129637|ref|YP_004095919.1| radical SAM protein [Bacillus cellulosilyticus DSM 2522] gi|315474585|gb|ADU31188.1| Radical SAM domain protein [Bacillus cellulosilyticus DSM 2522] Length = 356 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 2/66 (3%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ ++ C + C C R E LS + +A + I +FTGGD Sbjct: 11 PFIVIWEVTRACALKCLHC-RAEAQYKSDPRELSRNEGKALIDDIASMDNPL-FVFTGGD 68 Query: 154 PLILSH 159 PL+ S Sbjct: 69 PLMRSD 74 >gi|91200261|emb|CAJ73306.1| similar to moaA/nifB/ppqE/nirJ protein family for cofactor bionsynthesis [Candidatus Kuenenia stuttgartiensis] Length = 333 Score = 41.2 bits (96), Expect = 0.24, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 39/103 (37%), Gaps = 9/103 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-G 152 P RI L + C + C++C R+ + + A +Q + G G Sbjct: 28 PTRICLYVTDRCTLSCKWCLRQ-STQDKFSNKRHDMSVDQARKILQHFPNAARLSLAGFG 86 Query: 153 DPLILSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINP 194 +PL++ L K+ + V I+ + + +RI+ Sbjct: 87 EPLMVDD--LFKITAEFKKRPMRVSIITNGTLLL----ERIDD 123 >gi|290769880|gb|ADD61651.1| putative protein [uncultured organism] Length = 502 Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 40/212 (18%), Positives = 81/212 (38%), Gaps = 42/212 (19%) Query: 14 LYNANLIKKEQIDEIKEISNHYSIA--LTPVIANLINPHNPNDPIARQFIPQKEELNILP 71 L + L ++ ++++ Y +TP + ND EEL Sbjct: 34 LIDQGLTREAATAQLEQ---KYRDRADVTPA--------DIND-----CFDDIEELTAAG 77 Query: 72 E-EREDPIGDNN------HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 + D D+ + +K + L + H C + C +CF + + Sbjct: 78 QLFAPDAYADHAFDFKNRSNVVKALC--------LHVAHTCNLNCSYCFAAQGKFHGEAG 129 Query: 125 VLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILR 179 ++S + + AL ++ E S EV F GG+PL ++ + ++++ R I +H + R Sbjct: 130 LMSFETGKRALDFLIEHSGTRRNLEVDFFGGEPL-MNFEVCKQLVAYARSIEKEHNKNFR 188 Query: 180 FHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 F + I E+I + V +++ Sbjct: 189 F---TMTTNGIGITDEVIDWCNKECHNVVLSL 217 >gi|169832193|ref|YP_001718175.1| MiaB-like tRNA modifying protein [Candidatus Desulforudis audaxviator MP104C] gi|169639037|gb|ACA60543.1| MiaB-like tRNA modifying enzyme [Candidatus Desulforudis audaxviator MP104C] Length = 450 Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 18/126 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R +K+ C +C +C + L S+ E L + E++ TG Sbjct: 151 RTRAFIKVQEGCRDFCTYC-----IVPYARGPLRSRPPERVLELARGLVDRGYSELVLTG 205 Query: 152 GDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + L + L +++ L I + LR S V+P I EL++ + E Sbjct: 206 VNLGAYGRDLGTENLPGLVRRLVRIPGLARLRLSS----VEPNEITRELVEAVAE---NP 258 Query: 208 YIAIHA 213 A H Sbjct: 259 VCAPHF 264 >gi|154685272|ref|YP_001420433.1| YfkA [Bacillus amyloliquefaciens FZB42] gi|154351123|gb|ABS73202.1| YfkA [Bacillus amyloliquefaciens FZB42] Length = 373 Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 44/121 (36%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L + L + E + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALP---IDLLLKRLDEIPLLRSISITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K +++ + L H + +R +IN L + + P +H + Sbjct: 90 LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIGRYERIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|284165007|ref|YP_003403286.1| radical SAM protein [Haloterrigena turkmenica DSM 5511] gi|284014662|gb|ADB60613.1| Radical SAM domain protein [Haloterrigena turkmenica DSM 5511] Length = 380 Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 40/210 (19%), Positives = 76/210 (36%), Gaps = 36/210 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ +L C + C C R + ++ L + + + L E V+ +GGD Sbjct: 12 PMVLIWELTQACGLACDHC-RADARPNRHPDELPTAEGKRLLEDAAEFGDGQLVVLSGGD 70 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--INPELIQCLKEAG-KPVYIA 210 PL+ ++ L I H L R+ I + + I+ + +AG K + ++ Sbjct: 71 PLVRDD------VEEL--IAHGDDL--GLRMTITPSGTGSLTADRIRAMADAGLKRMAVS 120 Query: 211 IHANHP---YEFS------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 I P EF EE I A+ AG+ + + + + L + Sbjct: 121 IDGATPESHDEFRGETGSFEETIRAVEDAKAAGLPVQVNTTVCRQ---TVGELPEIRDLL 177 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQ 291 E+ + + F + I G+ Sbjct: 178 REIGAVMWSVF----------FLVPIGRGR 197 >gi|169334037|ref|ZP_02861230.1| hypothetical protein ANASTE_00430 [Anaerofustis stercorihominis DSM 17244] gi|169258754|gb|EDS72720.1| hypothetical protein ANASTE_00430 [Anaerofustis stercorihominis DSM 17244] Length = 438 Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 27/167 (16%), Positives = 64/167 (38%), Gaps = 29/167 (17%) Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGI-VHR-YPDRILLKLLHVCPVYCRFCFRREM 117 +P E + + +++ +G+ VHR + + + ++ C +C +C Sbjct: 110 SLPSLLEECDAKRKLIVEVLEDSDKLAEGLPVHRQFKHKAFVSIMKGCNNFCSYC----- 164 Query: 118 VGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGG----------DPLILSHKRLQKV 165 + S++ + L+ ++ + EV G DP + +L K+ Sbjct: 165 IVPYTRGRERSREYQNILSEVRELANDGVKEVTLLGQNVNSYGKNLDDP--VPFAKLLKM 222 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 + + I+ V+ + H + ELI+ +++ K + IH Sbjct: 223 VSEVEGIERVRFMTSHPKDLS-------DELIEVIRDNPK-ICRHIH 261 >gi|160872066|ref|ZP_02062198.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsiella grylli] gi|159120865|gb|EDP46203.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsiella grylli] Length = 443 Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 40/111 (36%), Gaps = 10/111 (9%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154 R L+ ++ C YC FC G + L D A + ++ ++ + E+ G + Sbjct: 149 RALVSIMEGCNKYCSFCVVPYTRGEEISRPL--DDVLAEVVHLSQQ-GVREITLLGQNVN 205 Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 L +++ + I + +RF + P+ R+ Sbjct: 206 DYQGPRFEGGTADLADLIRYIAAIDDILRIRFTTSHPLAFSDRLIQAYADI 256 >gi|78043321|ref|YP_359656.1| molybdenum cofactor biosynthesis protein MoaA [Carboxydothermus hydrogenoformans Z-2901] gi|123576645|sp|Q3ADX8|MOAA_CARHZ RecName: Full=Molybdenum cofactor biosynthesis protein A gi|77995436|gb|ABB14335.1| molybdenum cofactor biosynthesis protein MoaA [Carboxydothermus hydrogenoformans Z-2901] Length = 321 Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 43/239 (17%), Positives = 92/239 (38%), Gaps = 33/239 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C G +L+ ++ + + +V TGG+PL+ Sbjct: 14 ISVTDKCNLNCFYCKPGNFQEFSPGDILTFEEILEVVRAFL-PLGLKKVRITGGEPLV-- 70 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP- 216 K L +++ + + + L + + P + LK AG V ++ + +P Sbjct: 71 RKNLLYLIENIAALPGIDDLALTTNGILF------PRYARDLKSAGLSRVNFSLDSLNPD 124 Query: 217 --YEFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIN-DDPEILAN-LMRTFVELR- 265 + + AI+ + + +VLL+GIN D+ + + + R V R Sbjct: 125 KFRSITGGGELKNVLEAINLALELDLTPVKINTVLLRGINLDEIDAFVDFIFRYPVHWRF 184 Query: 266 --IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQ----PFYILDLPGGYG 318 + P D F ++++E +I+++ + I G P ++P G Sbjct: 185 IELMP----LNDREKWQRQF-VSVKEIVEIISAKYKLIPGKTVGGAGPARYYEVPEALG 238 >gi|29346323|ref|NP_809826.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron VPI-5482] gi|81445146|sp|Q8A9A2|RIMO_BACTN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|29338218|gb|AAO76020.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron VPI-5482] Length = 436 Score = 41.2 bits (96), Expect = 0.25, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 71/227 (31%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + S ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKSMEEILDEVRYLVSQGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G D + + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 + L+ I+D+ + LMR Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316 ++ E+ K++ ++++ G+ + ++ PG Sbjct: 268 --------------VSKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGE 300 >gi|153009561|ref|YP_001370776.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum anthropi ATCC 49188] gi|151561449|gb|ABS14947.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum anthropi ATCC 49188] Length = 345 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 58/169 (34%), Gaps = 31/169 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + ++ TGG+PL+ Sbjct: 30 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCTAFI-DKGVRKLRLTGGEPLV-- 86 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI- 211 K + +++ L + + + S++ R EL +C V + Sbjct: 87 RKNIMHLIRQLSRHLKSGALDELTLTTNGSQL-----SRFADELAEC-GIRRINVSLDTL 140 Query: 212 -----HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + + + I AGI + +V LK ND Sbjct: 141 DPEKFH-----QITRWGDLPRVLEGIEAAQRAGIRVKINAVALKDFNDH 184 >gi|321312027|ref|YP_004204314.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis BSn5] gi|320018301|gb|ADV93287.1| ribosomal protein S12 methylthiotransferase [Bacillus subtilis BSn5] Length = 451 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G +L S+D E + Q+ + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LLRSRDPEEVIKQAQQLVDAGYKEIVLTG 196 Query: 151 ------GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + K+L L ++ V+ +R S ++ +I ++I+ L + Sbjct: 197 IHTGGYGED---MKDYNFAKLLSELDTRVEGVKRIRISS----IEASQITDKVIEVLDRS 249 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 250 DK-IVNHLHI 258 >gi|307946521|ref|ZP_07661856.1| putative radical SAM domain protein [Roseibium sp. TrichSKD4] gi|307770185|gb|EFO29411.1| putative radical SAM domain protein [Roseibium sp. TrichSKD4] Length = 472 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 40/235 (17%), Positives = 90/235 (38%), Gaps = 34/235 (14%) Query: 57 ARQFIPQKEELNI-LPEEREDPIGDNN---HSPLKGIVHRYPDRILLKLLHVCPVYCRFC 112 Q +P + E + D + +N + + + ++L + +C + C +C Sbjct: 36 FLQNLPGEREYQAGIQAFFSDFLASHNAPSTNDVSWPTENKIEDLVLNISQICNLACSYC 95 Query: 113 FRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 + ++ + G ++S + AL Y + + + F GG+P L+ + ++ ++ Sbjct: 96 YADDL--NSAGKIMSKSVCQEALDRAYQMSDTGLKSLKFLGGEP-TLAFEEIKYAVEYAE 152 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAI------ 224 I + R S V + + +IN E+ Q A K Y+ + + P Sbjct: 153 TICAAEGYRLPSFVIVTNGTKINAEMAQFF--ASKNFYVLVSMDGPQSIHNLLRPFTGGR 210 Query: 225 -------AAISRLANAGI-----ILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 AI L + + +Q+ G++ + L+ F+E+ I+ Sbjct: 211 GSYSKALDAIVELKKKNVEVAIEAVYTQTHYKNGVS-----IRCLLDHFLEIGIR 260 >gi|288553679|ref|YP_003425614.1| hypothetical protein BpOF4_03280 [Bacillus pseudofirmus OF4] gi|288544839|gb|ADC48722.1| hypothetical protein BpOF4_03280 [Bacillus pseudofirmus OF4] Length = 370 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159 + C YCRFC G +G VL D E IQE + E++ GG Sbjct: 61 TNFCDTYCRFCAFYRKPGHSEGYVL---DNERIFEKIQETIDVGGTEILMQGG---TNPD 114 Query: 160 KRLQKVLKTLRYIK 173 +L LR IK Sbjct: 115 LKLDYYTNLLREIK 128 >gi|284923527|emb|CBG36622.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli 042] Length = 445 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMLNQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|256378891|ref|YP_003102551.1| Coproporphyrinogen dehydrogenase [Actinosynnema mirum DSM 43827] gi|255923194|gb|ACU38705.1| Coproporphyrinogen dehydrogenase [Actinosynnema mirum DSM 43827] Length = 460 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 35/183 (19%), Positives = 60/183 (32%), Gaps = 48/183 (26%) Query: 71 PEEREDPIGDNNHSPLKGIVHR----YPDRILLKLLHVCPVYCRFCF--------RREMV 118 P + P+ + + G+V R +PD L + C CRFC R + Sbjct: 38 PRQSYRPLPPGPDADVPGLVSRSLARFPDLNLYAHVPFCRQICRFCNLYAVADAGRDDRH 97 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 VLS + AA + ++ + + GG P +L + L++++ L Sbjct: 98 DDYVTAVLSEAERLAA---LTDRKHVTTLYLGGGTPSLLRPQLLERLVTGLLA------- 147 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA--IAAISRLANAGII 236 + DP PE E AA+ + AGI Sbjct: 148 -----LFATDPATPPPE-------------------TALEVDPATVDAAALRDIRAAGIN 183 Query: 237 LLS 239 ++ Sbjct: 184 RIN 186 >gi|167837373|ref|ZP_02464256.1| molybdenum cofactor biosynthesis protein A [Burkholderia thailandensis MSMB43] Length = 370 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + G +L+ ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRTVFGKDYPFLPHSALLTLEEIERLARLFVAH-GVEKIRITGGE 99 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K ++ +++ L + Sbjct: 100 PLL--RKNIEFLIERLAKM 116 >gi|22255838|gb|AAM94763.1| CalE1 [Micromonospora echinospora] Length = 441 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 32/163 (19%), Positives = 52/163 (31%), Gaps = 29/163 (17%) Query: 98 LLKLLHVCPVYCRFC---FRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGG 152 L + C + C FC R Q L + E + + F GG Sbjct: 49 LYVHVPFCEMRCGFCNLFTRANAPAEQVTGYLRQLRRQAEQVADALGADAGYARAAFGGG 108 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELIQCLKEAGK- 205 P L+ L ++ + +R+P V P P+ + L G Sbjct: 109 TPTYLTADELAELFD-------IATTTTGARLPGVPLSVETSPATATPDRLAVLAAHGTT 161 Query: 206 PVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLS 239 V I + A P + E AA+ + +A I +L+ Sbjct: 162 RVSIGVQSFLDAEARAAGRPQRRT-EVEAALGAIRDARIPVLN 203 >gi|84496509|ref|ZP_00995363.1| molybdenum cofactor biosynthesis protein A [Janibacter sp. HTCC2649] gi|84383277|gb|EAP99158.1| molybdenum cofactor biosynthesis protein A [Janibacter sp. HTCC2649] Length = 336 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 37/180 (20%), Positives = 71/180 (39%), Gaps = 22/180 (12%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + CR+C E + K +L+ + ++ I + +V TGG+PL+ Sbjct: 23 VSVTDRCNLRCRYCMPAEGLPWLAKPEMLTDDELIRLVS-IFVALGVEQVRLTGGEPLL- 80 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216 + L ++ + + + + L L AG V I++ P Sbjct: 81 -RRSLTDLVGRIAALTPRPRIAMTTNGIG------LDRLAGPLAAAGLDRVNISLDTVDP 133 Query: 217 YEFSEEAI--------AAISRLANAG-IILLSQSVLLKGINDD--PEILANLMRTFVELR 265 EF++ A + AG + + +V ++GIND ++LA + ELR Sbjct: 134 KEFADLTRRDRLKDVEAGLEAAREAGLVPVKVNAVAMRGINDHSVADLLAWCLERGYELR 193 >gi|310658531|ref|YP_003936252.1| isopentenyl-adenosine a37 tRNA methylthiolase [Clostridium sticklandii DSM 519] gi|308825309|emb|CBH21347.1| isopentenyl-adenosine A37 tRNA methylthiolase [Clostridium sticklandii] Length = 477 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 57/137 (41%), Gaps = 18/137 (13%) Query: 78 IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 + D + + ++G+ RY + + +++ C +C +C + S++ E + Sbjct: 166 VWDIDGNVIEGLPSARRYDLKAFVNIMYGCNNFCTYC-----IVPYTRGRERSRNPEDVI 220 Query: 136 AYIQ--EKSQIWEVIFTGGDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVD 188 ++ ++ + E+ G + + K+L L I+ ++ +RF + Sbjct: 221 NEVKDLARNGVKEITLLGQNVNSYGNDFDNKVSFAKLLTMLNDIQGIERIRFMTSH---- 276 Query: 189 PQRINPELIQCLKEAGK 205 P+ I+ ELI + K Sbjct: 277 PKDISEELIDAVANLDK 293 >gi|193213382|ref|YP_001999335.1| MiaB-like tRNA modifying enzyme [Chlorobaculum parvum NCIB 8327] gi|193086859|gb|ACF12135.1| MiaB-like tRNA modifying enzyme [Chlorobaculum parvum NCIB 8327] Length = 456 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 45/126 (35%), Gaps = 21/126 (16%) Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R LK+ C C +C R TV+ A Y E++ Sbjct: 154 RTRAFLKIQDGCSFGCAYCAIPLARGRSRSVPLATVMERAAAIAEAGY-------REIVL 206 Query: 150 TGGDPLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 TG + + +L+ L + V +R S ++PQ ++ ELI+ + + K Sbjct: 207 TGINIADYHDGQHGFTDLLRHLEELD-VSRIRISS----IEPQFLDDELIELVAGSTK-- 259 Query: 208 YIAIHA 213 I H Sbjct: 260 -IMPHF 264 >gi|197117199|ref|YP_002137626.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] gi|197086559|gb|ACH37830.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] Length = 507 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 39/108 (36%), Gaps = 16/108 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C +C + + T+L +K + + + I +V +GGDPL Sbjct: 144 LMFSNECETNCSYCQAQRRYLPEN-TLLPAKRWKEIIGE-AKSLGIEQVTLSGGDPLYRK 201 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR--INPELIQCLKEAG 204 + L I + + P + I E+ + L E G Sbjct: 202 --------EALALIGEL----IAKDMLFQLPTKCCITEEIAERLVEVG 237 >gi|300940154|ref|ZP_07154761.1| radical SAM domain protein [Escherichia coli MS 21-1] gi|300455015|gb|EFK18508.1| radical SAM domain protein [Escherichia coli MS 21-1] Length = 445 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMLNQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEREADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|291548154|emb|CBL21262.1| RNA modification enzyme, MiaB family [Ruminococcus sp. SR1/5] Length = 375 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 22/130 (16%), Positives = 51/130 (39%), Gaps = 27/130 (20%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD 153 R +K+ C +C +C + + S++ E+ L ++ ++ EV+ TG Sbjct: 79 RAYIKVQDGCNQFCTYC-----IIPYARGRVRSRNIESVLKEVRALAEKGYKEVVLTGI- 132 Query: 154 PLILSH----------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 LS + L +++ + I+ ++ +R S ++P + E + + Sbjct: 133 --HLSSYGVDFPEEKKETLLSLIRAVHEIEGIRRIRLGS----LEPGIVTREFAEGIAAL 186 Query: 204 GKPVYIAIHA 213 K + H Sbjct: 187 PK---VCPHF 193 >gi|197303019|ref|ZP_03168067.1| hypothetical protein RUMLAC_01746 [Ruminococcus lactaris ATCC 29176] gi|197297874|gb|EDY32426.1| hypothetical protein RUMLAC_01746 [Ruminococcus lactaris ATCC 29176] Length = 440 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 57/146 (39%), Gaps = 16/146 (10%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEA 133 P+ + G Y LK+ C +C +C ++ G+ + + + E Sbjct: 131 PLPETKRLVTTGGHFAY-----LKIAEGCDKHCTYCIIPKVRGNYRSVPMERLVNEAREL 185 Query: 134 ALAYIQEKSQI-WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 A ++E + E G D + K L K++K L I ++ +R P+ I Sbjct: 186 AEQGVKELILVAQETTLYGKD--LYGEKSLHKLVKELCNISGIRWIRI----LYCYPEEI 239 Query: 193 NPELIQCLKEAGKPV-YIAIHANHPY 217 ELIQ +KE K Y+ + H Sbjct: 240 TDELIQVMKEEPKVCHYLDLPIQHAN 265 >gi|52425076|ref|YP_088213.1| molybdenum cofactor biosynthesis protein A [Mannheimia succiniciproducens MBEL55E] gi|81609553|sp|Q65TT2|MOAA_MANSM RecName: Full=Molybdenum cofactor biosynthesis protein A gi|52307128|gb|AAU37628.1| MoaA protein [Mannheimia succiniciproducens MBEL55E] Length = 337 Score = 41.2 bits (96), Expect = 0.26, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 62/161 (38%), Gaps = 18/161 (11%) Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + VC C +C QK + LS + + +V TGG+P L Sbjct: 27 LSVTDVCNFKCTYCLPSGYQPPVQKESFLSLDEIRRIVGAFAAMGT-EKVRLTGGEP-TL 84 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 L +++T+ ++ ++ + + R+ ++ + K + +++ + P Sbjct: 85 RKDFLA-IVETISALEGIKKV-----ALTTNGYRMEKDVERWKKAGVSSINVSVDSLDPR 138 Query: 218 E---FSEE-----AIAAISRLANAGII-LLSQSVLLKGIND 249 + + E + I R G + SVL+K +ND Sbjct: 139 QFYSITGENKFHQVMKGIERAFEIGYEKIKVNSVLMKNLND 179 >gi|91201046|emb|CAJ74104.1| similar to moaA/nirJ/ppqE family of cofactor synthesis proteins [Candidatus Kuenenia stuttgartiensis] Length = 350 Score = 41.2 bits (96), Expect = 0.27, Method: Composition-based stats. Identities = 42/222 (18%), Positives = 81/222 (36%), Gaps = 44/222 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L+ C + C +C+ G LS ++ ++ + + ++ GG+PL+ Sbjct: 32 LEFTKKCNLRCLYCYSSA--GFAAENELSLEEMKSVVDQAKGLGAKKIILLGGGEPLLY- 88 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 + + ++K + I +Q + F + + I+ E+ Q L V + I N Sbjct: 89 -EGVVDIIKYINSIG-LQQILF-TNGVL-----IDKEIAQTL--YRNKVSVVIKYN---S 135 Query: 219 FSEEAIAAISR--------------LANAGII-----LLSQSVLLK-GINDDPEILANLM 258 F+ E ++ L +G L QSV+ K IN+ PE+ + Sbjct: 136 FNPEVQDMLANAKGTYKQITRGLKILMESGYPREDLGLGIQSVICKQNINEIPEMW--MW 193 Query: 259 RTFVELRIKPY---YLHHPDLAAGTSHFRLTIEEGQKIVASL 297 + I PY + A + E ++I L Sbjct: 194 AR--KRNIIPYFEILTYQGR-ARENKDLIVPTLEIKEIFKRL 232 >gi|332827121|gb|EGJ99906.1| ribosomal protein S12 methylthiotransferase rimO [Dysgonomonas gadei ATCC BAA-286] Length = 431 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 37/229 (16%), Positives = 69/229 (30%), Gaps = 53/229 (23%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C M G + + ++ E + ++ ++ + Sbjct: 138 AYLKISEGCNRACSYCSIPIMTGKHQSRQI--EEVEEEVRHLVASGVKEFQVIAQDLSYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ------RINPELI------- 197 G D +L +++ + I+ V+ +R H P P R N + Sbjct: 196 GLD--NYKQAKLPELIDRIAKIEGVEWIRLHYAYPANFPYDLLPVMRNNENVCKYLDIAL 253 Query: 198 -----QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 LK+ + + N EE GI + + L+ G P Sbjct: 254 QHISDNMLKKMRRNITKEQTYNLIKRIREEV---------PGIHIR--TTLMVG---HPG 299 Query: 253 ILANLMRTFV---------ELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 + + PY H D +H+R I + K Sbjct: 300 ESHKDFEELLQFVKDVRFDRMGAFPY--SHEDGTYAYAHYRDEISDAVK 346 >gi|291550943|emb|CBL27205.1| SSU ribosomal protein S12P methylthiotransferase [Ruminococcus torques L2-14] Length = 440 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 52/146 (35%), Gaps = 16/146 (10%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 P+ + G Y LK+ C +C +C + +V + + A Sbjct: 131 PLPETKRLVTTGGHFAY-----LKIAEGCDKHCTYCII-PKIRGNFRSVPMERLLKEAQD 184 Query: 137 YIQEKSQIWEVIFTGGDPLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 + E+ ++ L K L K+L+ L I ++ +R P+ I Sbjct: 185 -LAEQGVKELILVAQETTLYGKDLYGEKSLPKLLRELCKISGIRWIRI----LYCYPEEI 239 Query: 193 NPELIQCLKEAGKPV-YIAIHANHPY 217 ELIQ +KE K Y+ + H Sbjct: 240 TDELIQVMKEESKICHYLDLPIQHAN 265 >gi|253577928|ref|ZP_04855200.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251850246|gb|EES78204.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 485 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 63/145 (43%), Gaps = 21/145 (14%) Query: 78 IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 + + ++G+ +Y + + ++ C +C +C + S++ EA + Sbjct: 175 VWKESDEIVEGMPSDRKYSFKTGVNIMFGCNNFCSYC-----IVPYVRGREKSREPEAII 229 Query: 136 AYIQE--KSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIV 187 I+ + EV+ G + + K L+ +LK + I+ ++ +RF + Sbjct: 230 EEIKGLVADGVTEVMLLGQN-VNSYGKTLEHPVTFAQLLKQVEAIEGLKRIRFMTSH--- 285 Query: 188 DPQRINPELIQCLKEAGKPVYIAIH 212 P+ ++ ELI+ + E+ K V +H Sbjct: 286 -PKDLSDELIRTMAES-KKVCHHLH 308 >gi|171185411|ref|YP_001794330.1| radical SAM domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170934623|gb|ACB39884.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta] Length = 216 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 5/81 (6%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L CP+ CR+C + G L D E + + V+ TGG+PLI Sbjct: 23 AVFIRLAGCPIRCRYCDTKYSWDPLGGEEL---DAEEVVRRAAAHGPLGHVVITGGEPLI 79 Query: 157 LSHKRLQKVLKTLRYIKHVQI 177 + L ++ LR + V++ Sbjct: 80 --WRNLHELACPLRRLGTVEV 98 >gi|158422523|ref|YP_001523815.1| molybdenum cofactor biosynthesis protein A [Azorhizobium caulinodans ORS 571] gi|158329412|dbj|BAF86897.1| molybdenum cofactor biosynthesis protein A [Azorhizobium caulinodans ORS 571] Length = 399 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 31/172 (18%), Positives = 58/172 (33%), Gaps = 41/172 (23%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + + + ++ TGG+PL+ Sbjct: 84 VSVTDRCDFRCVYCMSEHMTFLPKPDLLTLEELDRLCSAFVAR-GVRKLRLTGGEPLVRR 142 Query: 159 H-KRLQKVLKTLRYIKHVQILRF--------HSRVPIVDPQRINPELIQCLKEAGKPVYI 209 L + L H++ R S++ R +L C + V I Sbjct: 143 DVMTLFRSLSR-----HLETGRLEELTLTTNGSQL-----ARFAGDLAACGVK-RINVSI 191 Query: 210 AIHANHPYEFSEEAIAAISRL-------------ANAGIILLSQSVLLKGIN 248 + AI+R AGI + +V LK +N Sbjct: 192 DT-------LDPDKFRAITRWGDLAKVLEGVKAAQRAGIHVKLNAVALKDVN 236 >gi|116748163|ref|YP_844850.1| radical SAM domain-containing protein [Syntrophobacter fumaroxidans MPOB] gi|116697227|gb|ABK16415.1| Radical SAM domain protein [Syntrophobacter fumaroxidans MPOB] Length = 292 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 50/120 (41%), Gaps = 14/120 (11%) Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKD---TEAALAYIQEKSQ-IWEVIF 149 D +LL++ C C FC G+ KG KD +A + Y + V Sbjct: 18 DSVLLQVTVGCSHNKCTFC------GTYKGERFRIKDDATIDADIRYAAGNLSFLHRVFL 71 Query: 150 TGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GD LI+ RL ++++ +R + ++ + + + R PE + L+E G + Sbjct: 72 VDGDALIIPQDRLVRIMRRIREEMPWIRRVGLYGNAKSIL--RKTPEQLAELRELGLGIV 129 >gi|300691998|ref|YP_003752993.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum PSI07] gi|299079058|emb|CBJ51720.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum PSI07] Length = 387 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 16/90 (17%), Positives = 37/90 (41%), Gaps = 16/90 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +++ +LS ++ E E + ++ TGG+ Sbjct: 62 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERIARLFIEH-GVEKIRLTGGE 120 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSR 183 PL+ ++++++ L R H+R Sbjct: 121 PLLRKD--IERLVEMLA--------RLHTR 140 >gi|224538617|ref|ZP_03679156.1| hypothetical protein BACCELL_03511 [Bacteroides cellulosilyticus DSM 14838] gi|224519751|gb|EEF88856.1| hypothetical protein BACCELL_03511 [Bacteroides cellulosilyticus DSM 14838] Length = 498 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 82/226 (36%), Gaps = 41/226 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDPLI 156 L L + C +CR+C + V + T L I+E ++ + ++ GG+ + Sbjct: 146 LMLTNRCMAHCRYC-----YADTRTQVQNWLPTSRILELIREAAELPVQQINLIGGEIFL 200 Query: 157 LSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 +L L ++H ++ +++P E ++ LK+ I + + Sbjct: 201 HKD--WDIILAEL--VRHGIEPEFISTKIP------FTEECLRKLKQTHYKNLIQVSLDA 250 Query: 216 ------PYEFSEEAIAAISRLANAGIILLSQ--------SVLLKGINDDPEILANLMR-- 259 S ++ A + G+ +L Q SVL N DP L +L R Sbjct: 251 IDTTVLVQSLSVDSSYASEMMR--GLRMLDQSGLPYQVSSVLTTY-NCDPRTLTDLFRFL 307 Query: 260 ----TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKI 301 + R+ P G + + + ++ I L+E + Sbjct: 308 STLKNLHDWRLTPVSNSTTTKYPGFADLKPSHQKISDIFRFLQEAV 353 >gi|239627763|ref|ZP_04670794.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239517909|gb|EEQ57775.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 460 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 30/167 (17%), Positives = 57/167 (34%), Gaps = 29/167 (17%) Query: 64 KEELNILPEEREDPIGDNNHSP--LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQ 121 ++E D G + + P + I R +K+ C +C +C G Sbjct: 119 EDEGPKSGIHVLDIGGTDEYEPLHVDNIED--HTRAFIKVQDGCNQFCSYCIIPYARGRV 176 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTG------------GDPLILSH---KRLQKVL 166 + +D EA + + + EV+ TG G P+ + L ++ Sbjct: 177 RSR--KPEDVEAEVEGLVAR-GYKEVVLTGIHLSSYGMEHREGGPVQGGNWDHGPLLDLI 233 Query: 167 KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + I ++ +R S ++P+ I E + L K H Sbjct: 234 GRIHRIPGLERIRLGS----LEPRIITEEFAEALAGLAK---FCPHF 273 >gi|170754856|ref|YP_001781949.1| RNA modification protein [Clostridium botulinum B1 str. Okra] gi|238065365|sp|B1II37|RIMO_CLOBK RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|169120068|gb|ACA43904.1| RNA modification enzyme, MiaB family [Clostridium botulinum B1 str. Okra] Length = 445 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%) Query: 91 HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 H+Y D RIL + C +C +C + G + ++ + Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184 Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + ++ + E+I D + K L ++L+ + ++ V+ +R P+ Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239 Query: 191 RINPELIQCLKEAGK 205 I ELI+ +K K Sbjct: 240 EITKELIEEIKNNDK 254 >gi|168180715|ref|ZP_02615379.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC 2916] gi|226949759|ref|YP_002804850.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str. Kyoto] gi|182668451|gb|EDT80430.1| RNA modification enzyme, MiaB family [Clostridium botulinum NCTC 2916] gi|226843731|gb|ACO86397.1| RNA modification enzyme, MiaB family [Clostridium botulinum A2 str. Kyoto] Length = 445 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%) Query: 91 HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 H+Y D RIL + C +C +C + G + ++ + Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184 Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + ++ + E+I D + K L ++L+ + ++ V+ +R P+ Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239 Query: 191 RINPELIQCLKEAGK 205 I ELI+ +K K Sbjct: 240 EITKELIEEIKNNDK 254 >gi|167764860|ref|ZP_02436981.1| hypothetical protein BACSTE_03252 [Bacteroides stercoris ATCC 43183] gi|167697529|gb|EDS14108.1| hypothetical protein BACSTE_03252 [Bacteroides stercoris ATCC 43183] Length = 440 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 35/174 (20%), Positives = 65/174 (37%), Gaps = 21/174 (12%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYP-------DRILLKLLHVCPVYCRFCFRREMVG 119 L L + R+ G+ + S LK I P R LK+ C YC +C Sbjct: 114 LQYLGDLRKHESGEAHTSALKDIRSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTI-PFAR 172 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQ 176 + + E A E++ TG GD + + ++K L ++ ++ Sbjct: 173 GRSRNGSIASLVEQARQ--AAAEGGKEIVLTGVNIGDFGKSTGETFFDLVKALDDVECIE 230 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229 R S ++P + E+I+ + + + H + P S+E + + R Sbjct: 231 RYRISS----IEPNLLTDEIIEFVSRSKR---FMPHFHIPLQSGSDEVLKLMRR 277 >gi|153940621|ref|YP_001391704.1| RNA modification protein [Clostridium botulinum F str. Langeland] gi|238065366|sp|A7GFZ4|RIMO_CLOBL RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|152936517|gb|ABS42015.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str. Langeland] gi|295319732|gb|ADG00110.1| RNA modification enzyme, MiaB family [Clostridium botulinum F str. 230613] Length = 445 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%) Query: 91 HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 H+Y D RIL + C +C +C + G + ++ + Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184 Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + ++ + E+I D + K L ++L+ + ++ V+ +R P+ Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239 Query: 191 RINPELIQCLKEAGK 205 I ELI+ +K K Sbjct: 240 EITKELIEEIKNNDK 254 >gi|148380361|ref|YP_001254902.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str. ATCC 3502] gi|153932059|ref|YP_001384581.1| RNA modification protein [Clostridium botulinum A str. ATCC 19397] gi|153935820|ref|YP_001388097.1| RNA modification protein [Clostridium botulinum A str. Hall] gi|238065360|sp|A7FVY1|RIMO_CLOB1 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|238065364|sp|A5I4I1|RIMO_CLOBH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|148289845|emb|CAL83953.1| radical SAM superfamily protein [Clostridium botulinum A str. ATCC 3502] gi|152928103|gb|ABS33603.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str. ATCC 19397] gi|152931734|gb|ABS37233.1| RNA modification enzyme, MiaB family [Clostridium botulinum A str. Hall] Length = 445 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%) Query: 91 HRYPD-------RILLKLLHV--------CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 H+Y D RIL + C +C +C + G + ++ + Sbjct: 127 HKYSDTKINEGNRILTTPTYTAYVRIAEGCNNFCTYCAIPRIRGKYRSR--KKENILKEV 184 Query: 136 AYIQEKSQIWEVIFTGGDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 + ++ + E+I D + K L ++L+ + ++ V+ +R P+ Sbjct: 185 ENLAKQ-GVKEIILIAQDTTMYGIDIYGKKVLHELLRDISKVEGVKWIRL----LYCYPE 239 Query: 191 RINPELIQCLKEAGK 205 I ELI+ +K K Sbjct: 240 EITKELIEEIKNNDK 254 >gi|117924796|ref|YP_865413.1| GTP cyclohydrolase subunit MoaA [Magnetococcus sp. MC-1] gi|167011814|sp|A0L7R4|MOAA_MAGSM RecName: Full=Molybdenum cofactor biosynthesis protein A gi|117608552|gb|ABK44007.1| GTP cyclohydrolase subunit MoaA [Magnetococcus sp. MC-1] Length = 326 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 59/168 (35%), Gaps = 30/168 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C E + LS + LA + I TGG+PL+ Sbjct: 16 VSVSEQCNMRCNYCRVPEQESQLREQWLSFAELSRLLARFAQ-LGIGRFRLTGGEPLVRK 74 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPY 217 L +++ L + V+ + + + P + LKEAG V I++ Sbjct: 75 D--LAQLVAGLHQLAGVEEISLSTNGL------LLPRFAKALKEAGIARVNISL-----D 121 Query: 218 EFSE--------------EAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E A I AG+ + V++ G+ND Sbjct: 122 SLDPSGFQKICGDVGSPDEVKAGILAALEAGLTPVKVNMVVMGGVNDH 169 >gi|291519768|emb|CBK74989.1| Organic radical activating enzymes [Butyrivibrio fibrisolvens 16/4] Length = 222 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 7/82 (8%) Query: 97 ILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + L C + C +C R ++ + L Y++ + V TGG+PL Sbjct: 24 AVFIRLRGCNLACSYCDTRWACSYEAPAEQMTEVEI---LDYVKST-GVNRVTLTGGEPL 79 Query: 156 ILSHKRLQKVLKTLRYIKHVQI 177 + ++ +L+ ++++ Sbjct: 80 --KARDIKDLLRAFAAEPNIKV 99 >gi|291459240|ref|ZP_06598630.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Oribacterium sp. oral taxon 078 str. F0262] gi|291418494|gb|EFE92213.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Oribacterium sp. oral taxon 078 str. F0262] Length = 479 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 56/127 (44%), Gaps = 12/127 (9%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + + R + + + C +C +C V ++ + S + +++ + E++ Sbjct: 185 LRKTDFRASVNISYGCNNFCTYCI-VPYVRGREKSRSSEEILRECRDLVRD--GVKEIML 241 Query: 150 TGGDP--LILSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G + L + L+ ++L+ + I ++ +RF + P +P+ + ELI + E + Sbjct: 242 LGQNVNSYGLDREELRFPELLRRVSEIPGLRRIRFMT--P--NPKDFSEELIDLIGE-RE 296 Query: 206 PVYIAIH 212 + IH Sbjct: 297 NICRHIH 303 >gi|167754725|ref|ZP_02426852.1| hypothetical protein CLORAM_00229 [Clostridium ramosum DSM 1402] gi|167705557|gb|EDS20136.1| hypothetical protein CLORAM_00229 [Clostridium ramosum DSM 1402] Length = 382 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 9/134 (6%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 YP + + + C + C C G+ ++ D + L+ ++ V GG Sbjct: 49 YPKTLQFPITNKCNLDCIMCNIH---GNDIKNEMNIDDIKRVLSN-SIFCKVESVGINGG 104 Query: 153 DPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 +P IL ++ +L TL ++++ I+ + +P P +I E+ K+ ++ Sbjct: 105 EPFILKDITSIIETILDTLPALRNLYIISNGT-IPN-CPDKI-KEIYNLCKKHNVKFTLS 161 Query: 211 IHANHPYEFSEEAI 224 + E E Sbjct: 162 FSIDGFDEMHNEMR 175 >gi|113968874|ref|YP_732667.1| radical SAM domain-containing protein [Shewanella sp. MR-4] gi|114048989|ref|YP_739539.1| radical SAM domain-containing protein [Shewanella sp. MR-7] gi|113883558|gb|ABI37610.1| Radical SAM domain protein [Shewanella sp. MR-4] gi|113890431|gb|ABI44482.1| Radical SAM domain protein [Shewanella sp. MR-7] Length = 295 Score = 40.9 bits (95), Expect = 0.27, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 66/165 (40%), Gaps = 31/165 (18%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKS-QIWEVIFTGG 152 ++L++ + C C FC +M + + K E + I + + V G Sbjct: 19 LILQVTNGCSWNQCSFC---DMYTQPQKAFRAQKLDKIEQDILAIAKTGMPVSRVFLADG 75 Query: 153 DPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKPV 207 D + L RL+ + + + R++ V +R+ P+ + PE + L+E G + Sbjct: 76 DAMSLPFARLEAICELINRHLPQV------TRISSYCLPRNLNNKTPEQLARLRELGLSL 129 Query: 208 YIAIHANHPYEF---------SEEAIAAISRLANAG----IILLS 239 + E E ++AA+ ++ AG +++L+ Sbjct: 130 LYVGCESGDDEVLAKIKKGETFESSLAALQKIRAAGMKSSVMILN 174 >gi|302389477|ref|YP_003825298.1| RNA modification enzyme, MiaB family [Thermosediminibacter oceani DSM 16646] gi|302200105|gb|ADL07675.1| RNA modification enzyme, MiaB family [Thermosediminibacter oceani DSM 16646] Length = 441 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 8/115 (6%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 E ED + N + HR R LK+ C ++C +C + G + L + Sbjct: 128 EVEDIMQTRNFEEIAFRGHRQRTRAFLKIQEGCNMFCSYCIIPYVRGPVRSRTL--ESII 185 Query: 133 AALAYIQEKSQIWEVIFTGGD-PLILSH----KRLQKVLKTLRYIKHVQILRFHS 182 + E++ TG L + L V++ L I+ ++ +R S Sbjct: 186 REAENLAGD-GFKEIVLTGIHLGLYGADFKGGPTLYDVIERLSRIEGIKRIRLSS 239 >gi|238893550|ref|YP_002918284.1| putative iron-sulfur modifier protein [Klebsiella pneumoniae NTUH-K2044] gi|238545866|dbj|BAH62217.1| putative iron-sulfur modifier protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 395 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 83/232 (35%), Gaps = 34/232 (14%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135 P+ SP+ + P + C + CR+C+ + + E + Sbjct: 13 PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDETPVNKMDDARLEQFI 63 Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189 YI + +I ++ GG+PL+ +K L RY + S + Sbjct: 64 RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119 Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242 IN + +E G + +++ N + + S + A GI LL Q V Sbjct: 120 TLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVDFN 179 Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 LL + N+ A + V L + Y P ++ G + + EG ++ Sbjct: 180 LLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225 >gi|257068045|ref|YP_003154300.1| GTP cyclohydrolase subunit MoaA [Brachybacterium faecium DSM 4810] gi|256558863|gb|ACU84710.1| GTP cyclohydrolase subunit MoaA [Brachybacterium faecium DSM 4810] Length = 366 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 41/235 (17%), Positives = 76/235 (32%), Gaps = 51/235 (21%) Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCRFCFRREM 117 +P + E D + +P + R+ L L C + C +C Sbjct: 10 MPTPRRTDETATELPDTS-ERPDTPA--LADRFGREATDLRLSLTDFCNLRCTYCM---- 62 Query: 118 VGSQKGTVLSSKDT---EAALAYIQ---EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 + T L K + + ++ E+ I +V FTGG+PL L++++ + Sbjct: 63 -PASGLTFLGKKQLLSVDEVVRLVRIGVERLGIEQVRFTGGEPLTRPD--LEEIIAGVAS 119 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231 + + + L+ AG RL+ Sbjct: 120 LDPRPDISLTTNAIG------LDHRAARLRAAGLDRINV-------SLDSVVSETFERLS 166 Query: 232 N--------AGI---------ILLSQSVLLKGINDD--PEILANLMRTFVELRIK 267 AGI + +VLL G+ND P++L + ++LR+ Sbjct: 167 RRPLLHRVLAGIDGARAAGLDPIKVNAVLLPGVNDQELPDLLDWCLERELQLRVI 221 >gi|83310894|ref|YP_421158.1| arylsulfatase regulator [Magnetospirillum magneticum AMB-1] gi|82945735|dbj|BAE50599.1| Arylsulfatase regulator [Magnetospirillum magneticum AMB-1] Length = 459 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 27/140 (19%) Query: 43 IANLINPHNPNDPIARQFIPQKEELNILPEE----------REDPIGDNNHSPLKGIVHR 92 LI+ N + R K+E+ + + RED + + H Sbjct: 26 YTALIDADNAFWALVR-----KDEMERVLDNGALERDWRAKREDFAREMDMLRF----HL 76 Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL----AYIQEK-SQIWE- 146 P + C + C +C+ + G +S A+ Y + + Sbjct: 77 KPSAVYFNPTERCNLDCSYCYI-PQTMRRSGEHMSRDRLMEAMARLDEYFSRTMPEGRKP 135 Query: 147 -VIFTGGDPLILSHKRLQKV 165 +IF G +PL+ + + Sbjct: 136 QIIFHGAEPLLNRDAMFEAI 155 >gi|150019250|ref|YP_001311504.1| thiamine biosynthesis protein ThiH [Clostridium beijerinckii NCIMB 8052] gi|149905715|gb|ABR36548.1| biotin and thiamin synthesis associated [Clostridium beijerinckii NCIMB 8052] Length = 472 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 41/210 (19%), Positives = 75/210 (35%), Gaps = 32/210 (15%) Query: 90 VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 Y +RI+ L L + C C +C L+ ++ + + +Q+ Sbjct: 77 QRFYGNRIVMFAPLYLSNYCVNGCTYCPYHHKNKHITRKKLTQEEIKNEVIALQDMGHKR 136 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPELIQCLK 201 + TG DP+ + + + ++T+ IKH ++ + V+ E + LK Sbjct: 137 LALETGEDPVNNPLEYVLESIETIYSIKHKNGAIRRV-------NVNIAATTVENYRKLK 189 Query: 202 EAGKPVYIAI----HANHPYEFSEEA--------IAAISRLANAGIILLSQSVLLKGIN- 248 +AG YI H E A+ R AGI + V L G+N Sbjct: 190 DAGIGTYILFQETYHKKTYEELHPTGPKHDYAYHTEAMDRAMEAGIDDVGLGV-LYGLNM 248 Query: 249 ---DDPEILANLMRTFVELRIKPYYLHHPD 275 D +L + + + P+ + P Sbjct: 249 YRYDFVGLLMHAEHLEAAMGVGPHTISVPR 278 >gi|257094383|ref|YP_003168024.1| molybdenum cofactor biosynthesis protein A [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257046907|gb|ACV36095.1| molybdenum cofactor biosynthesis protein A [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 359 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 33/191 (17%), Positives = 70/191 (36%), Gaps = 37/191 (19%) Query: 85 PLKGIVHRYPDRIL------------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 P+ + R+P L L + C C +C EM + VL+ ++ Sbjct: 21 PISPVTSRHPKGALVDKFGRHVTYIRLSITDRCDFRCSYCMAEEMTFLPRAQVLTLEECL 80 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDP 189 + +V TGG+PL+ + +L+ + + ++ L S++ Sbjct: 81 RIAGTF-VDLGVTKVRVTGGEPLVRHNAI--WLLERIAGLSGLKELVITTNGSQL----- 132 Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHP---YEFS-----EEAIAAISRLANAGI-ILLS 239 L+ AG + + +++ E + + + + AG L Sbjct: 133 ----DRFAAALRAAGVRRINVSLDTLRSQRFREITRVGDLAKVLRGLDAAQAAGFERLKL 188 Query: 240 QSVLLKGINDD 250 +V+++G+NDD Sbjct: 189 NTVMMRGVNDD 199 >gi|220933522|ref|YP_002512421.1| GTP cyclohydrolase subunit MoaA [Thioalkalivibrio sp. HL-EbGR7] gi|219994832|gb|ACL71434.1| GTP cyclohydrolase subunit MoaA [Thioalkalivibrio sp. HL-EbGR7] Length = 327 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 58/176 (32%), Gaps = 35/176 (19%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFT 150 R+ + + L + C + C +C + ++ LS + + + + V T Sbjct: 10 RHIEYVRLSVTDQCDLRCFYCMPKGFKDFEEPEHWLSFDEIARVMGAFGQ-LGVQRVRIT 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAGKPV 207 GG+PL+ + ++ L + + + +R+ + Q LK+AG Sbjct: 69 GGEPLVRKD--IPDLVSRLAALPGINDISLSTNATRM---------AKHAQALKDAG--- 114 Query: 208 YIAIHAN-HPYEFSEEAIAA------------ISRLANAGI-ILLSQSVLLKGIND 249 N E + AG + V +KG+ND Sbjct: 115 --VARINVSLDSLKPEVFKQVTGGKLEKVLDGLMAAKAAGFSPIKINMVAMKGVND 168 >gi|293412933|ref|ZP_06655601.1| conserved hypothetical protein [Escherichia coli B354] gi|291468580|gb|EFF11073.1| conserved hypothetical protein [Escherichia coli B354] Length = 445 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIINTLREKLPLTPDCEITIEGRVLNFDAERIDA 164 >gi|289578370|ref|YP_003476997.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter italicus Ab9] gi|297544647|ref|YP_003676949.1| MiaB-like tRNA modifying protein YliG [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528083|gb|ADD02435.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter italicus Ab9] gi|296842422|gb|ADH60938.1| MiaB-like tRNA modifying enzyme YliG [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 436 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 31/140 (22%), Positives = 52/140 (37%), Gaps = 18/140 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150 LK+ C C FC + G + + +D + +K ++ Sbjct: 146 AYLKIAEGCSNVCSFCAIPRIRGRYRSRKM--EDILKEAEELVKKGAKELILIAQDTTKY 203 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209 G D I L ++LK L I +++ +R P + ELI+ +K K V YI Sbjct: 204 GID--IYKKFMLPQLLKELSLIPNLKWIRL----LYAYPDSVTDELIEEIKANKKVVKYI 257 Query: 210 AIHANHPYEFSEEAIAAISR 229 I H +E + + R Sbjct: 258 DIPLQHSN---DEVLKRMKR 274 >gi|228949292|ref|ZP_04111556.1| antilisterial bacteriocin (subtilosin) production [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810418|gb|EEM56775.1| antilisterial bacteriocin (subtilosin) production [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 462 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 5/74 (6%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 YP +++ + C V CR C+ G+ K V+S ++ L + + + TGG Sbjct: 122 YPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSIDQIKSLLDDL-NHIGVKLIELTGG 178 Query: 153 DPLILSHKRLQKVL 166 D + + L+++L Sbjct: 179 DITVHPN--LKEIL 190 >gi|170756363|ref|YP_001782065.1| hypothetical protein CLD_2115 [Clostridium botulinum B1 str. Okra] gi|169121575|gb|ACA45411.1| conserved hypothetical protein [Clostridium botulinum B1 str. Okra] Length = 444 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 30/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L + C C FCF ++ + T+ D ++ L+++Q + T Sbjct: 79 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215 + + + +++ I + + H+ +P+ R+ +L+ Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 F+ + RLA GI + Q VL G+N + E L + L Sbjct: 163 -NRFAGNLYDRMKRLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209 >gi|121594117|ref|YP_986013.1| molybdenum cofactor biosynthesis protein A [Acidovorax sp. JS42] gi|120606197|gb|ABM41937.1| GTP cyclohydrolase subunit MoaA [Acidovorax sp. JS42] Length = 378 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 8/83 (9%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F + +LS ++ + ++ TGG+ Sbjct: 44 ISVTDRCNFRCGYCMPKEVFDKHYRYLPHSDLLSFEEITRLARLFMAH-GVRKIRLTGGE 102 Query: 154 PLILSHKRLQKVLKTLRYIKHVQ 176 PL+ L+ ++ L ++ ++ Sbjct: 103 PLLRKD--LENLVAQLAELRTLE 123 >gi|331270008|ref|YP_004396500.1| MiaB-like tRNA modifying protein [Clostridium botulinum BKT015925] gi|329126558|gb|AEB76503.1| MiaB-like tRNA modifying enzyme [Clostridium botulinum BKT015925] Length = 433 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 21/128 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R LK+ C +C +C + SK+ E + +++ S+ EVI +G Sbjct: 141 KTRAFLKIQDGCNNFCSYCLI-----PFARGAVCSKNPETIIDEVKKLSEHGFKEVILSG 195 Query: 152 GDP------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D L + L+ VLK + I+ + +R S + P+ + ++I+ + K Sbjct: 196 IDISSYGVDLEGNWNLLK-VLKAIDEIEGINRVRIGS----IGPEFFDEDIIKEIGSLKK 250 Query: 206 PVYIAIHA 213 + H Sbjct: 251 ---LCPHF 255 >gi|260072600|gb|ACX30499.1| molybdenum cofactor biosynthesis protein A [uncultured SUP05 cluster bacterium] gi|269467972|gb|EEZ79700.1| molybdenum cofactor biosynthesis protein A [uncultured SUP05 cluster bacterium] Length = 331 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 67/164 (40%), Gaps = 22/164 (13%) Query: 99 LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C C +C R ++ +LS +D + + E I +V TGG+PL+ Sbjct: 17 ISITEHCNYRCFYC-RDDEHTPNCKREDILSYEDIQRIVRLFAE-LGISKVRLTGGEPLL 74 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA-- 213 + + K+ + + I ++ + P+ + + L E G V I+I + Sbjct: 75 --RRGIVKIARLISSIDGIKDV------PLSTNAHLLEKFAPKLHENGINRVNISIDSLM 126 Query: 214 -NHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 N E + E I I +G+ + V+++G ND+ Sbjct: 127 PNRFKEITRGGDVNEVIKGIDAAIASGMHPIKINMVVMRGNNDN 170 >gi|157373260|ref|YP_001471860.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis HAW-EB3] gi|157315634|gb|ABV34732.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis HAW-EB3] Length = 328 Score = 40.9 bits (95), Expect = 0.28, Method: Composition-based stats. Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 31/175 (17%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE---KSQIWE 146 R + + L + C C +C S+ L+ + LA++ + + + + Sbjct: 10 RKVEYLRLSVTDRCDFRCVYCM------SEDPCFLNREQVLSLEELAWVGQAFTELGVRK 63 Query: 147 VIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + TGG+PL+ + +L K+L L + + + SR+ + + ++ +G Sbjct: 64 IRLTGGEPLVRTDCDQLVKLLGDLPGLSELSMTTNGSRL---------TKFAEKMRGSGL 114 Query: 206 -PVYIAIHANHPY---EFS-----EEAIAAISRLANAGII-LLSQSVLLKGINDD 250 + I++ P E + E I I AG + +V+L+G NDD Sbjct: 115 GRLNISLDTLKPELFTELTRNGKLERVIEGIDAAKAAGFTRIKINAVILRGQNDD 169 >gi|163814151|ref|ZP_02205543.1| hypothetical protein COPEUT_00305 [Coprococcus eutactus ATCC 27759] gi|158450600|gb|EDP27595.1| hypothetical protein COPEUT_00305 [Coprococcus eutactus ATCC 27759] Length = 437 Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 14/115 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIFT 150 K+ C C +C + G + + A+ + ++ E Sbjct: 142 AYFKIAEGCNKLCTYCIIPHIRGRYR--SIPMDRLLASAEKLAADGIKELVLVAQETTLY 199 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + K+L ++L L I+ ++ +R P+ I ELI + E K Sbjct: 200 GVD--LYGGKKLPELLTKLSDIEGIEWIRL----LYCYPEEITDELISVMAENPK 248 >gi|237737359|ref|ZP_04567840.1| radical SAM domain-containing protein [Fusobacterium mortiferum ATCC 9817] gi|229421221|gb|EEO36268.1| radical SAM domain-containing protein [Fusobacterium mortiferum ATCC 9817] Length = 222 Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 32/79 (40%), Gaps = 5/79 (6%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C + C +C R G L S+D I + S I + TGG+PL+ Sbjct: 24 AIFIRLQKCNLNCSYCDTRWANGDDAPYTLMSED--KIYDRILK-SGIKNITLTGGEPLL 80 Query: 157 LSHKRLQKVLKTLRYIKHV 175 + +L+ + ++ Sbjct: 81 HKDVEI--LLEKIGENPNL 97 >gi|229106153|ref|ZP_04236707.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28] gi|228677271|gb|EEL31594.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-28] Length = 373 Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 41/181 (22%), Positives = 69/181 (38%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ +L C + C C R E + L+ ++ + + I E + ++FTGGD Sbjct: 10 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDNIYEMNNPM-LVFTGGD 67 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ + + IK + +R S P P + E IQ KE G + Sbjct: 68 PLMRPD--IYDIAD--YAIK--KGVRL-SMTPSATPN-VTKETIQKAKEVGIARWAFSLD 119 Query: 209 -----IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H +E + I AI L I + +V+ + E +A L+ Sbjct: 120 GPTAEIHDHFRGVEGSFELT---INAIRYLHELEIPVQINTVISNYNVNVLEDMAKLVEE 176 Query: 261 F 261 Sbjct: 177 L 177 >gi|288572914|ref|ZP_06391271.1| MiaB-like tRNA modifying enzyme [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568655|gb|EFC90212.1| MiaB-like tRNA modifying enzyme [Dethiosulfovibrio peptidovorans DSM 11002] Length = 432 Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 10/111 (9%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R LK+ C +C +C + G L D E + + E S E++ TG Sbjct: 144 TRAFLKVQDGCDHFCSYCIIPFLRGKPVSRPL--DDLEREVRSVVE-SGCPEIVLTGVHL 200 Query: 155 LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + + L +L+ + I V+ +RF S ++P + +L+ + E Sbjct: 201 GLYGREGGPGLADLLRAVGAIDGVKRIRFGS----LEPFSVGDDLLDAMAE 247 >gi|218707132|ref|YP_002414651.1| coproporphyrinogen III oxidase [Escherichia coli UMN026] gi|293407121|ref|ZP_06651045.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412] gi|298382869|ref|ZP_06992464.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli FVEC1302] gi|300898197|ref|ZP_07116554.1| radical SAM domain protein [Escherichia coli MS 198-1] gi|331665122|ref|ZP_08366023.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli TA143] gi|218434229|emb|CAR15147.1| putative oxygen independent coproporphyrinogen III oxidase (chuW-like) [Escherichia coli UMN026] gi|291425932|gb|EFE98966.1| coproporphyrinogen III oxidase [Escherichia coli FVEC1412] gi|298276705|gb|EFI18223.1| oxygen-independent coproporphyrinogen III oxidase [Escherichia coli FVEC1302] gi|300358113|gb|EFJ73983.1| radical SAM domain protein [Escherichia coli MS 198-1] gi|331057632|gb|EGI29618.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli TA143] Length = 445 Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 24/167 (14%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGD---NNHSPLKGIVHRYP 94 LTP A ++ P D R +P + + + E+ + SP Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTASP--------R 56 Query: 95 DRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIF 149 R++ + C +C FC F + + ++ E A + + + + I V F Sbjct: 57 KRLIYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYF 116 Query: 150 TGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRIN 193 GG P LS L +++ TLR + + RV D +RI+ Sbjct: 117 GGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERID 163 >gi|291522480|emb|CBK80773.1| Radical SAM superfamily [Coprococcus catus GD/7] Length = 278 Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 7/81 (8%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 ++ +Y ++ L +L C C CF R GS K ++ KD + + E + E Sbjct: 1 MLKKY--KVNLHVLEACNFRCFHCFSR--FGSNK--IMGLKDWKQIVDNCMESQVVSEFN 54 Query: 149 FTGGDPLILSHKR-LQKVLKT 168 GG+PL+ L K ++ Sbjct: 55 IAGGEPLLYKDLIGLTKYIRE 75 >gi|323526884|ref|YP_004229037.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. CCGE1001] gi|323383886|gb|ADX55977.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. CCGE1001] Length = 369 Score = 40.9 bits (95), Expect = 0.29, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + +LS ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYAFLPHSALLSFEEIERLARLFVAH-GVEKIRLTGGE 99 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K L+ +++ L + Sbjct: 100 PLL--RKNLEFLIERLSQL 116 >gi|320104529|ref|YP_004180120.1| GTP cyclohydrolase subunit MoaA [Isosphaera pallida ATCC 43644] gi|319751811|gb|ADV63571.1| GTP cyclohydrolase subunit MoaA [Isosphaera pallida ATCC 43644] Length = 341 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 67/159 (42%), Gaps = 19/159 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C + + +LS ++ E + + I ++ TGG+PL+ Sbjct: 29 ISVTDRCNIRCVYCMPETVQFLPRAEILSFEEIERVVR-VAVGLGINKLRLTGGEPLVRR 87 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHP- 216 L K++ L I +Q + + ++ P L Q L +AG + + +++ P Sbjct: 88 D--LTKLVARLTAIPGIQDVGLTTNGLLLGP------LAQPLWDAGLRRINVSLDTLDPV 139 Query: 217 --YEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGI 247 E + E+ I I AG + +V +KG+ Sbjct: 140 SFRELTRRDGLEQVIEGILAAKRAGFDPVKINAVAIKGV 178 >gi|297171740|gb|ADI22732.1| 2-methylthioadenine synthetase [uncultured verrucomicrobium HF0500_27H16] Length = 439 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 28/140 (20%), Positives = 53/140 (37%), Gaps = 16/140 (11%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG 152 R LK+ C C FC + S+D + L Q + E+I TG Sbjct: 148 QRANLKIQDGCDFMCTFC-----IIPFARGRARSRDFQNLLEEAQNLVARGVRELIITGV 202 Query: 153 DPLI--LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + S + + ++ L + + +R S P P+ L + +++ + Sbjct: 203 NIGTYKHSGEGIVDIVDALDDLDGLTRIRISSIEPTTIPEI----LFERMRDPSHALLPY 258 Query: 211 IHANHPYEF-SEEAIAAISR 229 +H P + S+E + A+ R Sbjct: 259 LHI--PLQAGSDEILEAMRR 276 >gi|317488728|ref|ZP_07947264.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA] gi|316912159|gb|EFV33732.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA] Length = 435 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 62/177 (35%), Gaps = 22/177 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGDPLI 156 L C C FCF + + + + ++ V TGG+PL+ Sbjct: 89 FFLSLACNRSCYFCFNANQA-DYADRLRVNDAWRDEVDAFADACGGEVTHVGLTGGEPLL 147 Query: 157 LSHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG---KPVYI-- 209 + + + ++ H+++ ++ L+ L++AG + I Sbjct: 148 HADESVAFCAYVRQRFPRAHIRLYTAG--------DFLDEPLLDRLRDAGLDELRMSIKL 199 Query: 210 -AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 + + E ++A+ ++R ++ + ++ G E + L+ ++ Sbjct: 200 DVLDVDRADEIIDDAVDVLARAKRFIPQVMVEMPVMPG---TGEAMRRLLDRLDQVG 253 >gi|251772224|gb|EES52794.1| conserved protein of unknown function [Leptospirillum ferrodiazotrophum] Length = 464 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 9/78 (11%) Query: 195 ELIQCLKEAGKPVYIAIHANHP---YEF-----SEEAIAAISRLANAGIILLSQSVLLKG 246 + ++ L++ P+YI++HA P + +++ + + RL N GI L +Q VL+ G Sbjct: 148 DYLRILEQRLSPLYISVHATEPALRRQILKNDRAQDVLPLLERLCNGGITLHTQVVLMPG 207 Query: 247 INDDPEILANLMRTFVEL 264 IND E L + L Sbjct: 208 IND-GEALLRTWKDLSAL 224 >gi|319899903|ref|YP_004159631.1| MiaB-like tRNA modifying enzyme [Bacteroides helcogenes P 36-108] gi|319414934|gb|ADV42045.1| MiaB-like tRNA modifying enzyme [Bacteroides helcogenes P 36-108] Length = 439 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 56/151 (37%), Gaps = 14/151 (9%) Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 HS R LK+ C YC +C + + E A + + Sbjct: 137 HSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTI-PFARGRSRNGTVASMVEQARQAVADGG 195 Query: 143 QIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 E++ TG GD + + ++K L ++ ++ R S ++P + E+I+ Sbjct: 196 --KEIVLTGVNIGDFGKSTGETFFDLVKALDGVEGIERYRISS----IEPNLLTDEIIEY 249 Query: 200 LKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229 + + + H + P S+E + + R Sbjct: 250 VAGSRR---FMPHFHIPLQSGSDEVLKLMRR 277 >gi|312897518|ref|ZP_07756938.1| radical SAM protein family [Megasphaera micronuciformis F0359] gi|310621370|gb|EFQ04910.1| radical SAM protein family [Megasphaera micronuciformis F0359] Length = 349 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 26/159 (16%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + CP C FC + V Q + + Y ++K +EV F GG Sbjct: 8 VFIPHLGCPHRCVFCDQ-HTVTGQAEVPTGADTAQKIATYTRKKGAAYEVAFYGG-SFTA 65 Query: 158 SHKRL-QKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212 L +++L+ V +R +R P I+ E++ LK G + V + + Sbjct: 66 VSATLQEELLQPAYEALQNGLVSAIRCSTR-----PDCIDDEVLNRLKRYGVRTVELGVQ 120 Query: 213 AN-----------HPYEFSEEAIAAISRLANAGIILLSQ 240 + H E + A+S L +G + Q Sbjct: 121 SMDDRVLQAAKRGHTSE---DVYRAVSLLKKSGFTIGLQ 156 >gi|284518792|gb|ADB92509.1| radical SAM family protein [Desulfotignum phosphitoxidans] Length = 505 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 31/137 (22%), Positives = 54/137 (39%), Gaps = 20/137 (14%) Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSP-LKGIV--HRYPDR-ILLKLLHVCPVYCR 110 P+ R +P E + +PE R+ G+N P G+ H+ +LL++ C ++CR Sbjct: 60 PVWRNHVPITEWIGDVPEIRD---GENLDCPHACGLCPDHQRETCCVLLEVTGQCNLHCR 116 Query: 111 FCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 FCF T + V +GG+P + L ++++ R Sbjct: 117 FCFADAAPALDPATETVKGWLDQL-----AVPGKTLVQLSGGEP-TVRDD-LPEIIRHAR 169 Query: 171 YI--KHVQI----LRFH 181 HVQ+ +R Sbjct: 170 QAGCAHVQLNSNGIRLG 186 >gi|295114964|emb|CBL35811.1| Fe-S oxidoreductase [butyrate-producing bacterium SM4/1] Length = 290 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 25/168 (14%) Query: 87 KGIVHRYPDRI---LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 +GIV+R P ++++ C C FC M ++ V S + L + Sbjct: 4 EGIVYRPPSEARSLIVQVTIGCAHNTCTFC---NMYKAKDFRVRSMDEIMEDLR--EAHD 58 Query: 143 Q----IWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELI 197 + +V GD L+L ++L +L +R + + +R S D R + E + Sbjct: 59 GYGAYVQKVFLADGDALVLQTEKLLAILDAVRELFPN--CVRVASYGTAQDILRKSEEEL 116 Query: 198 QCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGII 236 + LKEAG + + E + E +L GI Sbjct: 117 RQLKEAGLGIVYVGAESGDDEILREINKGVTARELKEVGQKLKRCGIQ 164 >gi|256374624|ref|YP_003098284.1| molybdenum cofactor biosynthesis protein A [Actinosynnema mirum DSM 43827] gi|255918927|gb|ACU34438.1| molybdenum cofactor biosynthesis protein A [Actinosynnema mirum DSM 43827] Length = 341 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 41/226 (18%), Positives = 81/226 (35%), Gaps = 47/226 (20%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C E + + +LS ++ + + + +V FTGG+PL+ Sbjct: 29 VSLTDKCNLRCTYCMPAEGLDWLRGPELLSDEELVRVIGIAVTRLGVTDVRFTGGEPLL- 87 Query: 158 SHKRLQKVLKT---LRYIKHVQI----LRFHSRVPIVDPQ----RINPELIQCLKEAGKP 206 + L+ VL L + + +R R+N L +E Sbjct: 88 -RRGLEDVLAATTALEPRPRTSMTTNGISLATRA-AGLKAAGLDRVNVSLDTLDRERF-- 143 Query: 207 VYIAIHANHPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRT 260 E + + +A ++ AG+ + SVL++G+NDD + L+ Sbjct: 144 ----------RELTRRDRLPDVLAGLAAAREAGLEPVKINSVLMRGVNDDEAV--ALVEF 191 Query: 261 FVELRIKPYYLHHPDLAA-----GTSHF-RLTIEEGQKIVASLKEK 300 VE + + R + Q+I+ +L + Sbjct: 192 AVEHG------YQLRFIEQMPLDPQHGWDRSEMVTAQEILDALGTR 231 >gi|114049235|ref|YP_739785.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. MR-7] gi|113890677|gb|ABI44728.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. MR-7] Length = 337 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 60/160 (37%), Gaps = 17/160 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + VC C +C + + LS + E ++ + ++ TGG+P + Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPNGRQQFLSLSEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217 +++ + R H+ + R+ + + + +++ + P Sbjct: 87 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAQEWFDAGLRRINVSVDSLDPKM 139 Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249 + + E + I +AG + +VLLKG+ND Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND 179 >gi|283782458|ref|YP_003373213.1| radical SAM enzyme, Cfr family [Pirellula staleyi DSM 6068] gi|283440911|gb|ADB19353.1| radical SAM enzyme, Cfr family [Pirellula staleyi DSM 6068] Length = 391 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 33/190 (17%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIFTG-GDPLILSH 159 C + C FC + + + + E L + EK ++ ++ G G+PL Sbjct: 143 GCAMGCVFCASG--LDGVDRNLTAGEIVEQMLLLQRLLPEKERLSHIVMMGMGEPLANID 200 Query: 160 KRLQKVLKTLRY----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH--- 212 L+ + + R I + + + + P + +L + + +++H Sbjct: 201 HVLEALGEATREDGLGISP-RRITIST---VGLPAAL-DKLCNLEAKY--HLAVSLHAPN 253 Query: 213 ---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF-- 261 N + +A +G L + VLL G+ND P+ L Sbjct: 254 NELRTRLVPINKAIGIEKVIESADRYFETSGRRLTFEYVLLAGVNDHPDHAQELAELLAG 313 Query: 262 --VELRIKPY 269 L + PY Sbjct: 314 RTAMLNVIPY 323 >gi|289192435|ref|YP_003458376.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22] gi|288938885|gb|ADC69640.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22] Length = 377 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 14/143 (9%) Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 EE+ EE D + + +KG ++++L + +C C +C E ++ Sbjct: 4 EEIEKYLEENFDKLPEGCKQCVKG------EKLVLFITGICNNNCYYCPLSEKRKNKDVI 57 Query: 125 VLSSKDTEAALAYIQEKS--QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + + I+E V TGG+PL L R K LK L+ + FH+ Sbjct: 58 YANERLITTVEEAIEEAKLCSSKGVGITGGNPL-LKINRTVKFLKALKN----EFDEFHA 112 Query: 183 RVPIVDPQRINPELIQCLKEAGK 205 P+ IN E ++ LKEAG Sbjct: 113 -HLYTTPETINEENLKLLKEAGL 134 >gi|260427313|ref|ZP_05781292.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citreicella sp. SE45] gi|260421805|gb|EEX15056.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Citreicella sp. SE45] Length = 435 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 5/93 (5%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153 L + C +C FC G++ + + + A ++ + E+ G + Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRVLTEARDLVER--GVREITLLGQNVN 206 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + L +++ L I ++ +RF + P Sbjct: 207 AYHGHDRGLAGLIRELAAIDGLERIRFTTSHPN 239 >gi|194290177|ref|YP_002006084.1| molybdenum cofactor biosynthesis protein a [Cupriavidus taiwanensis LMG 19424] gi|193224012|emb|CAQ70021.1| MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A [Cupriavidus taiwanensis LMG 19424] Length = 389 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 48/214 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ +LS ++ E + ++ TGG+ Sbjct: 62 ISVTDRCNFRCVYCMPKEVFDKDYTFLPHSELLSFEEIERTARLFVAH-GVEKIRLTGGE 120 Query: 154 PLILSHKRLQKVLKTLRYIKHV--------------------QILRFH--SRVPIVDPQR 191 PL+ K ++ +++ L I+ V + LR +RV + Sbjct: 121 PLL--RKNIEHLVEMLAKIETVSGKPLDLTLTTNASLLARKARALRDAGLTRVSVSL-DA 177 Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 I+ + + + V +H E A+ + V+ +G ND Sbjct: 178 IDDATFRRMNDVDFAVADVLH-------GIETAQAVGL-----APIKVNMVVKRGTND-- 223 Query: 252 EILANLMRTFVELRIKPYYLHHP-DLAAGTSHFR 284 + + + R F I ++H++ Sbjct: 224 QEIVPMARHFRHSGII--LRFIEFMDVGASNHWQ 255 >gi|229917969|ref|YP_002886615.1| Radical SAM domain protein [Exiguobacterium sp. AT1b] gi|229469398|gb|ACQ71170.1| Radical SAM domain protein [Exiguobacterium sp. AT1b] Length = 360 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 14/117 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTG 151 P ++ ++ C + C C + + DTE A I+E + ++FTG Sbjct: 10 PFIVIWEVTRACALSCVHCRAEAQFHRYENEL----DTEEGKALIREIHAMDNPILVFTG 65 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GDPL+ L ++ + R S P P R+ + ++ K AG + Sbjct: 66 GDPLMRED--LFELTAYASSLGM----RV-SMTPSATP-RVTHDAVKRAKAAGLSRW 114 >gi|150390308|ref|YP_001320357.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus metalliredigens QYMF] gi|229890435|sp|A6TR80|MIAB_ALKMQ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|149950170|gb|ABR48698.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alkaliphilus metalliredigens QYMF] Length = 476 Score = 40.9 bits (95), Expect = 0.30, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 51/118 (43%), Gaps = 16/118 (13%) Query: 78 IGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 + D ++G+ +Y + + ++ C +C +C G ++ S++ + + Sbjct: 165 VWDKEGDIVEGLPVTRKYGLKAFINIMFGCNNFCTYCIVPHTRGRER-----SREVQEII 219 Query: 136 AYIQ--EKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKHVQILRFHSRVP 185 ++ K+ E+ G + + K L++ +LK L I+ ++ +RF + P Sbjct: 220 DEVEELAKNGTKEITLLGQN-VNSYGKTLEEETDFGNLLKVLNKIEGIERIRFMTSHP 276 >gi|308051310|ref|YP_003914876.1| molybdenum cofactor biosynthesis protein A [Ferrimonas balearica DSM 9799] gi|307633500|gb|ADN77802.1| molybdenum cofactor biosynthesis protein A [Ferrimonas balearica DSM 9799] Length = 328 Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 27/166 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C + + VL+ ++ E + ++ TGG+PL+ S Sbjct: 16 MSVTDHCDFRCVYCMDEDPTFLPRDQVLTLEELHQIAQAFTE-LGVEKIRLTGGEPLVKS 74 Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214 L +++ + + ++ L SR+ + Q L+ AG K + I++ Sbjct: 75 D--LTYLVEQVAALPGLRDLCLTTNGSRL---------KKFAQPLQAAGLKRINISLDTL 123 Query: 215 HPYEFSEEAI--------AAISRLANAGI--ILLSQSVLLKGINDD 250 P F+ A I AG I L+ +V +KG NDD Sbjct: 124 DPERFTAVTRNGKLERVLAGIDAAIEAGFERIKLN-TVAMKGSNDD 168 >gi|332799055|ref|YP_004460554.1| MiaB-like tRNA modifying enzyme [Tepidanaerobacter sp. Re1] gi|332696790|gb|AEE91247.1| MiaB-like tRNA modifying enzyme [Tepidanaerobacter sp. Re1] Length = 435 Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 49/133 (36%), Gaps = 26/133 (19%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVI 148 HR R LK+ C ++C +C + + S+ + + Q K E++ Sbjct: 139 HRQKTRAFLKIQDGCNMFCSYC-----IIPYARGPVRSRSIDNIIDEAQSLAKDGFKEIV 193 Query: 149 FT-------GGDPLILSHKRLQKV--LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 T G D + + + + + I+ ++ +R S ++ + E ++ Sbjct: 194 LTGIHLGLYGRD---FKDENIHLLDVISRIADIEGIERIRLSS----IEAMELTDEFLKS 246 Query: 200 L---KEAGKPVYI 209 L K+ ++ Sbjct: 247 LCGIKKFCHHFHV 259 >gi|24213838|ref|NP_711319.1| 2-methylthioadenine synthetase [Leptospira interrogans serovar Lai str. 56601] gi|81589771|sp|Q8F710|RIMO_LEPIN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|24194676|gb|AAN48337.1| 2-methylthioadenine synthetase [Leptospira interrogans serovar Lai str. 56601] Length = 437 Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 63/160 (39%), Gaps = 29/160 (18%) Query: 56 IARQFIPQKEELNILPEEREDPIGD--NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC- 112 I R+ P EL+ E D + + S ++ Y +K+ C C FC Sbjct: 112 ILREKFP---ELSPSQLEFNDSLLERWKLSSKIENYSKPY---AYVKVSDGCNRGCSFCI 165 Query: 113 ---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKV 165 FR + V S +L +DT A+ +I + ++ G D + L + Sbjct: 166 IPSFRGKFVESPLDDIL--RDTNRAIR--AGAKEICLVSQDTVYYGRDS-----EILLDM 216 Query: 166 LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 ++ + I ++ILR + P + +LI+ + E K Sbjct: 217 VRKVAEIDSLEILRL----LYLYPDKKTEKLIRLMGETSK 252 >gi|113968617|ref|YP_732410.1| molybdenum cofactor biosynthesis protein A [Shewanella sp. MR-4] gi|113883301|gb|ABI37353.1| GTP cyclohydrolase subunit MoaA [Shewanella sp. MR-4] Length = 337 Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 60/160 (37%), Gaps = 17/160 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + VC C +C + + LS + E ++ + ++ TGG+P + Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPNGRQQFLSLSEIENLVSAFSQ-VGTQKIRITGGEPTLRK 86 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217 +++ + R H+ + R+ + + + +++ + P Sbjct: 87 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAQEWFDAGLRRINVSVDSLDPKM 139 Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249 + + E + I +AG + +VLLKG+ND Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND 179 >gi|125973459|ref|YP_001037369.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum ATCC 27405] gi|256005355|ref|ZP_05430320.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum DSM 2360] gi|281417660|ref|ZP_06248680.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum JW20] gi|238065327|sp|A3DDZ7|RIMO_CLOTH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|125713684|gb|ABN52176.1| SSU ribosomal protein S12P methylthiotransferase [Clostridium thermocellum ATCC 27405] gi|255990674|gb|EEU00791.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum DSM 2360] gi|281409062|gb|EFB39320.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum JW20] gi|316940304|gb|ADU74338.1| MiaB-like tRNA modifying enzyme YliG [Clostridium thermocellum DSM 1313] Length = 453 Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 13/126 (10%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP-L 155 LK+ C C +C + G + + +D + ++ + EVI D + Sbjct: 154 AYLKISEGCDNRCTYCAIPYIRGPYRSRKM--EDIISEAEFLAG-KGVKEVILVAQDVTV 210 Query: 156 ILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210 K+L ++++ + I+ ++ +R P+ I+ ELI+ + K V Y+ Sbjct: 211 YGKDLYGQKKLVELVREVSGIEGIEWIRL----LYTYPEEIDEELIKEIANNEKVVKYLD 266 Query: 211 IHANHP 216 I H Sbjct: 267 IPIQHA 272 >gi|78223881|ref|YP_385628.1| ribosomal RNA large subunit methyltransferase N [Geobacter metallireducens GS-15] gi|123742801|sp|Q39S71|RLMN_GEOMG RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|78195136|gb|ABB32903.1| 23S rRNA m(2)A-2503 methyltransferase [Geobacter metallireducens GS-15] Length = 346 Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 46/252 (18%), Positives = 91/252 (36%), Gaps = 48/252 (19%) Query: 95 DRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151 DR L + C + C FC ++ L++ + + ++ + ++F G Sbjct: 102 DRTTLCISSQVGCAMACEFCLTGTFRLTRN---LTAGEIVNQICAVRRDVPVRNIVFMGM 158 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+PL L V+K L+ I H L+F +R V L+ ++ G+ V + + Sbjct: 159 GEPL----ANLDNVVKALKIILHDDGLQFSTRRVTVS----TSGLVPEMERLGREVTVNL 210 Query: 212 HANHPYEFSEEAIAAI---------SRLANAG----------IILLSQSVLLKGINDDPE 252 + ++E I L +A I + V++KG+ND E Sbjct: 211 AVS-LNATTDEVRDRIMPVNRRYPLRLLLDACRSYPLPGRRKITIE--YVMIKGLNDSLE 267 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSH----FRLTIEEGQKIVAS--LKEKISGLCQ 306 L++ ++ K +L H F+ + + S L + + + + Sbjct: 268 DAKRLVKLLSDISSK------INLIPFNEHDGCSFKSPDQGAIDVFHSYLLSKHFTVITR 321 Query: 307 PFYILDLPGGYG 318 D+ G Sbjct: 322 SSRGSDISAACG 333 >gi|325295010|ref|YP_004281524.1| molybdenum cofactor biosynthesis protein A [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065458|gb|ADY73465.1| molybdenum cofactor biosynthesis protein A [Desulfurobacterium thermolithotrophum DSM 11699] Length = 324 Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 36/179 (20%), Positives = 70/179 (39%), Gaps = 30/179 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQ--IWEVIFTGGDP 154 + + C CR+C M K + S+ E ++ ++ I V TGG+P Sbjct: 9 ISVTDRCNFRCRYC----MPEGTKKFIPHSEILRYEEITEIVRVFTEFGIDSVRLTGGEP 64 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA 213 L+ K ++ ++ +R ++ ++ + + E ++ LKE G V I+I Sbjct: 65 LV--RKGIESLIVQIRELEEIRDISLTTNGF------FLSEKVKSLKEHGLNRVNISIDT 116 Query: 214 NHPYEF-----SEEAI------AAISRLANAGI-ILLSQSVLLKGINDDP-EILANLMR 259 P +F + + + + G+ + +VL+KG ND E L Sbjct: 117 LEPEKFGFITGTGDTRTLSRVLHGLEKAIEEGLNPVKVNTVLIKGFNDKEIESFVKLSE 175 >gi|291531886|emb|CBK97471.1| SSU ribosomal protein S12P methylthiotransferase [Eubacterium siraeum 70/3] Length = 446 Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 27/176 (15%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + P L++ C C +C + G + + E A + ++ + E++ Sbjct: 141 LQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKM-ENIIEEAKKF--AENGVKELV 197 Query: 149 FTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 D + L +LK L I ++ +R P+R+ ELI+ +K Sbjct: 198 IVAQDVTAYGIDLYKKYALPDLLKELCKIDGIKWIRL----LYCYPERMTDELIETIKTE 253 Query: 204 GKPV-YIAIHANHPY-EF---------SEEAIAAISRLANA--GIILLSQSVLLKG 246 K + YI I H E + ++L G++L + L+ G Sbjct: 254 DKVLNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLR--TTLITG 307 >gi|222111161|ref|YP_002553425.1| molybdenum cofactor biosynthesis protein a [Acidovorax ebreus TPSY] gi|221730605|gb|ACM33425.1| molybdenum cofactor biosynthesis protein A [Acidovorax ebreus TPSY] Length = 378 Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 13/83 (15%), Positives = 32/83 (38%), Gaps = 8/83 (9%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F + +LS ++ + ++ TGG+ Sbjct: 44 ISVTDRCNFRCGYCMPKEVFDKHYRYLPHSDLLSFEEITRLARLFMAH-GVRKIRLTGGE 102 Query: 154 PLILSHKRLQKVLKTLRYIKHVQ 176 PL+ L+ ++ L ++ ++ Sbjct: 103 PLLRKD--LENLVAQLAELRTLE 123 >gi|149200218|ref|ZP_01877240.1| molybdenum cofactor biosynthesis protein A [Lentisphaera araneosa HTCC2155] gi|149136660|gb|EDM25091.1| molybdenum cofactor biosynthesis protein A [Lentisphaera araneosa HTCC2155] Length = 335 Score = 40.9 bits (95), Expect = 0.31, Method: Composition-based stats. Identities = 18/93 (19%), Positives = 38/93 (40%), Gaps = 8/93 (8%) Query: 94 PDRIL-LKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 P R L L ++ C C +C R + + ++ L+ I + + + Sbjct: 10 PMRDLRLSVIDACNFRCLYCMPPDRDYDFFKKNEMLSVNEAIR--LSEIFVQLGVRRIRL 67 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 TGG+PL+ L +++ + I ++ L + Sbjct: 68 TGGEPLLRKD--LDQIIAGIAKIPELEDLAITT 98 >gi|295103385|emb|CBL00929.1| GTP cyclohydrolase subunit MoaA [Faecalibacterium prausnitzii SL3/3] Length = 325 Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 26/158 (16%), Positives = 60/158 (37%), Gaps = 16/158 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + +C + CR+C + ++ VL+ ++ A + I V TGG+PL+ Sbjct: 14 LSVTDLCNLRCRYCMPDGVEKLEREAVLTYEEFLRLAALFAQC-GIDTVRVTGGEPLV-- 70 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP-- 216 K + +++ L+ ++ + + ++ +L L V I++ P Sbjct: 71 RKNVAQLVAGLKATPGIRRVTLTTNAVLLA-----EQLPALLDAGLDSVNISLDTLRPEV 125 Query: 217 -YEFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248 + + + +G+ + V G+N Sbjct: 126 FRQITARDDFAAVQTGLQAALESGLPVKLNCVPQAGVN 163 >gi|225028441|ref|ZP_03717633.1| hypothetical protein EUBHAL_02715 [Eubacterium hallii DSM 3353] gi|224954239|gb|EEG35448.1| hypothetical protein EUBHAL_02715 [Eubacterium hallii DSM 3353] Length = 465 Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 14/116 (12%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQI----WEVIF 149 LK+ C C +C + G + +D + E ++ E Sbjct: 163 TAYLKIAEGCNKRCTYCIIPYIRGHYR--SFPMEDLLEEARKLAEGGVKELILIAQETTV 220 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D K L ++L L I+ ++ +R P+ I ELI +K+ K Sbjct: 221 YGMDCY--GRKALPELLTKLCEIEGIEWIRI----LYCYPEEITDELIAVMKKEKK 270 >gi|219669148|ref|YP_002459583.1| MiaB-like tRNA modifying enzyme YliG [Desulfitobacterium hafniense DCB-2] gi|219539408|gb|ACL21147.1| MiaB-like tRNA modifying enzyme YliG [Desulfitobacterium hafniense DCB-2] Length = 442 Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 44/118 (37%), Gaps = 20/118 (16%) Query: 97 ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 +K+ C YC +C R + ++L ++ EA + EV+ Sbjct: 148 AYVKVAEGCDNYCTYCIIPHVRGHFRSRTQESIL--REVEAM-----ASEGVKEVLLIAQ 200 Query: 153 DPL-ILSHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D + RL ++K + I+ ++ +R P+ ELI +KE K Sbjct: 201 DTTRYGKDRYGEYRLPSLIKEIAGIEGIEWIRL----MYCYPELFTDELITVMKETPK 254 >gi|323704197|ref|ZP_08115776.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium xylanolyticum LX-11] gi|323536263|gb|EGB26035.1| RNA modification enzyme, MiaB family [Thermoanaerobacterium xylanolyticum LX-11] Length = 467 Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 11/109 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C YC +C G + + D + +++ EV+ TG Sbjct: 160 HTRAYLKIQDGCNQYCTYCIIPYARGPIRSRKPN--DIFDEVKRLRDN-GYKEVVLTGIH 216 Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 L + L ++K + I+ ++ +R S P + ++ Sbjct: 217 VASYGKDLENVDLLDIIKMIHEIEGIERIRLSSIEPTFL----TEDFVR 261 >gi|167749835|ref|ZP_02421962.1| hypothetical protein EUBSIR_00803 [Eubacterium siraeum DSM 15702] gi|167657147|gb|EDS01277.1| hypothetical protein EUBSIR_00803 [Eubacterium siraeum DSM 15702] Length = 480 Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 21/143 (14%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS---------SKDTEAALAYIQEKS-QIWEV 147 L + CP C +C + + L K+ + ++ S ++ V Sbjct: 160 LYISIPFCPSRCSYCS---FISASGEGALKLIDDYFGLLLKELDIYADIVKRFSLKVDTV 216 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KP 206 GG P LS +L +++ L + +R + P I + ++ LK G + Sbjct: 217 YIGGGTPTTLSASQLDSLIEKLGEFD-IANIREFT-AEAGRPDTITEDKLRALKNGGVRR 274 Query: 207 VYIAIHANHPYEFSEEAIAAISR 229 + I P ++ + A+ R Sbjct: 275 ISIN-----PQSMNDSVLEAVGR 292 >gi|291547922|emb|CBL21030.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Ruminococcus sp. SR1/5] Length = 231 Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 4/71 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156 L L+ C + C +CF E G +S + A+ Y+ E S +V+ T GG+PL+ Sbjct: 101 LMLVQGCNLACSYCFGDEGSYCDSG-KMSKETAFKAIDYLFEHSDADKVLITFFGGEPLL 159 Query: 157 LSHKRLQKVLK 167 +++++ Sbjct: 160 AVD-LMKEIIS 169 >gi|33469596|gb|AAQ19837.1| molybdenum cofactor biosynthesis protein A [Alcaligenes faecalis] Length = 364 Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 21/101 (20%), Positives = 42/101 (41%), Gaps = 16/101 (15%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDT 131 P+ D + P++ + + + C C +C F V + +LS ++ Sbjct: 28 PLTDQHGRPVRDLR--------ISVTDRCNFRCTYCMPREVFDDRFVFLPRQDMLSFEEI 79 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 E LA I + ++ +GG+PL+ LQ ++ L + Sbjct: 80 ER-LARIFVGLGVRKLRLSGGEPLMRKD--LQDLVAKLAQL 117 >gi|85858425|ref|YP_460627.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB] gi|85721516|gb|ABC76459.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB] Length = 369 Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 39/209 (18%), Positives = 75/209 (35%), Gaps = 32/209 (15%) Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 N SPL + + ++ C + C C G G LS+++++ L I Sbjct: 2 NSSPLPSTLRM----VAWEVTRSCNLSCIHCRASAEKGPYAGE-LSTEESKNLLEEIAAF 56 Query: 142 SQIWEVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 S+ VI TGG+PL+ L L LR V + + + + + Sbjct: 57 SRP-VVILTGGEPLLREDIYELAAYGDGLG-------LRM---VLATNGTLVTEGIARRM 105 Query: 201 KEAGKPVYIAIHANHP--------YEFSEEAIAAI---SRLANAGIILLSQSVLLKGIND 249 +E+G ++I + P + S A+ + L AG+ + + + Sbjct: 106 RESGIQ-RVSISLDGPDAESHDAFRQMSGAFAGAMTGIAALKKAGMEFQVNTTIT---ST 161 Query: 250 DPEILANLMRTFVELRIKPYYLHHPDLAA 278 + L+ +M V L +++ Sbjct: 162 NRHQLSAMMDLAVRLGAAAHHIFLLVPTG 190 >gi|114710|sp|P20714|ANSME_KLEAE RecName: Full=Anaerobic sulfatase-maturating enzyme; Short=AnSME; AltName: Full=Arylsulfatase-activating protein; AltName: Full=Ser-type sulfatase-activating enzyme gi|149165|gb|AAA25050.1| atsB protein [Klebsiella aerogenes] Length = 405 Score = 40.9 bits (95), Expect = 0.32, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 83/232 (35%), Gaps = 34/232 (14%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135 P+ SP+ + P + C + CR+C+ + + E + Sbjct: 13 PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDETPVNKMDDARLEQFI 63 Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189 YI + +I ++ GG+PL+ +K L RY + S + Sbjct: 64 RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119 Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242 IN + +E G + +++ N + + S + A GI LL Q V Sbjct: 120 TLINDAWCRLFREHGFIIGLSLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVDFN 179 Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 LL + N+ A + V L + Y P ++ G + + EG ++ Sbjct: 180 LLVVVHNEMAAHAAAIYDRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225 >gi|160895257|ref|ZP_02076029.1| hypothetical protein CLOL250_02817 [Clostridium sp. L2-50] gi|156863136|gb|EDO56567.1| hypothetical protein CLOL250_02817 [Clostridium sp. L2-50] Length = 472 Score = 40.9 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 59/162 (36%), Gaps = 38/162 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ D ++ L+++Q + T + Sbjct: 83 LMSDYRSCTNKCMFCFIDQMPPGMRETLYFKDD-DSRLSFLQGN----YITLT-----NM 132 Query: 158 SHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + + + +++K L I + + ++C +H Sbjct: 133 TDEDVDRIIKMQLAPI----NISIQT----------TNPDLRC---------KMLH---- 165 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 F+ + + + RL + + Q VL K +ND E+ ++ Sbjct: 166 NRFAGDRLKYLDRLFEGHVEMNGQIVLCKHVNDGTELERSIR 207 >gi|257438716|ref|ZP_05614471.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium prausnitzii A2-165] gi|257198851|gb|EEU97135.1| molybdenum cofactor biosynthesis protein A [Faecalibacterium prausnitzii A2-165] Length = 326 Score = 40.9 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 9/166 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + +C + CR+C + ++ +L+ ++ LA + + + V TGG+PL+ Sbjct: 14 LSVTDLCNLRCRYCMPDGVDKLEREDILTYEEFLR-LAALFARCGVDTVRVTGGEPLV-- 70 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIV---DPQRINPELIQC-LKEAGKPVYIAIHAN 214 K +++++K L+ I ++ + + ++ P + L + + Sbjct: 71 RKGVEQLVKGLKAIPGIRKVTMTTNAVLLEQQLPALLEAGLDSVNISLDTLDPALFAKIT 130 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP-EILANLMR 259 EF A I +GI + V G+N+ E LA L + Sbjct: 131 ARDEF-AAVQAGIHAALESGIPVKLNCVPQVGVNEGELEALAALAQ 175 >gi|313905328|ref|ZP_07838694.1| MiaB-like tRNA modifying enzyme [Eubacterium cellulosolvens 6] gi|313469798|gb|EFR65134.1| MiaB-like tRNA modifying enzyme [Eubacterium cellulosolvens 6] Length = 437 Score = 40.9 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 51/127 (40%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R +K+ C +C +C G + ++ D + + S + EV+ T Sbjct: 145 HTRAFIKVQDGCNQFCTYCIIPYARGRVRSRKIA--DVYEEVKRLAA-SGVKEVVVTGIH 201 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 G D + + L +++ + ++ ++ +R S ++P I+ + I+ L E K Sbjct: 202 VCSYGKD--LGEGEDLLALIRAVNEVEGIERIRLGS----LEPGSISEDFIKALSEMPK- 254 Query: 207 VYIAIHA 213 + H Sbjct: 255 --VCPHF 259 >gi|225011708|ref|ZP_03702146.1| MiaB-like tRNA modifying enzyme [Flavobacteria bacterium MS024-2A] gi|225004211|gb|EEG42183.1| MiaB-like tRNA modifying enzyme [Flavobacteria bacterium MS024-2A] Length = 450 Score = 40.9 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 59/163 (36%), Gaps = 33/163 (20%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R LK+ C C +C Q V S E + +++ S + E++ TG Sbjct: 154 RTRAFLKVQDGCDYKCTYCTI-----PQARGVSRSDTLENIINNVKKIGDSGLREIVLTG 208 Query: 152 ---GDPL---ILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQCLKEAG 204 GD + K L+ + I V+ + R R+ ++P +N ++I + + Sbjct: 209 VNIGDYGKGEFGNKKHQHTFLELINAIDMVKSIDRI--RISSIEPNLLNDDIIDFVSGSN 266 Query: 205 KPVYIAIHANHPYE--------------FSEEAIAAISRLANA 233 + H + P + + + ++R+ A Sbjct: 267 R---FVPHFHIPLQSGSDRILKSMRRRYLTPLYLQRVARIKEA 306 >gi|210610113|ref|ZP_03288275.1| hypothetical protein CLONEX_00461 [Clostridium nexile DSM 1787] gi|210152625|gb|EEA83631.1| hypothetical protein CLONEX_00461 [Clostridium nexile DSM 1787] Length = 507 Score = 40.9 bits (95), Expect = 0.33, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 62/172 (36%), Gaps = 41/172 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L+ C C FCF +M + T+ Y ++ + F G+ + L Sbjct: 118 LMSEYRTCSNKCIFCFIDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITL 164 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHP 216 ++ +L + +I++ H + Q NPEL + L H Sbjct: 165 TNMKLPDI---------ERIIQMHLAPINISVQTTNPELRCKML-----------H---- 200 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE---ILANLMRTFVELR 265 F+ E + + L I + Q V+ K +ND E + +L + +R Sbjct: 201 NRFAGEKLKFLDILYENHIEMNGQVVVCKNVNDGKELERTIDDLSKFLPFMR 252 >gi|21674009|ref|NP_662074.1| florfenicol resistance protein, putative [Chlorobium tepidum TLS] gi|81791215|sp|Q8KD71|RLMN_CHLTE RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|21647156|gb|AAM72416.1| florfenicol resistance protein, putative [Chlorobium tepidum TLS] Length = 374 Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 38/184 (20%), Positives = 70/184 (38%), Gaps = 42/184 (22%) Query: 104 VCPVYCRFC------FRREMVGSQ--KGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDP 154 CP+ C FC FRR + S+ L K+ + + + ++F G G+P Sbjct: 138 GCPLRCTFCATGHMGFRRNLTASEITDQVFLLEKEAQK-----RHWRGLTNIVFMGMGEP 192 Query: 155 LILSHKRLQKVLKTLRYIK-----HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 L+ L+ + TL + + + + P ++ + +G + Sbjct: 193 LLNLDNVLESI-GTLTEKDYQFSISERKITIST---VGLPVEMD-----RIARSGLKTKL 243 Query: 210 AIHANHPYEFSEE---------AIAAISRLANAGIILLSQSV-----LLKGINDDPEILA 255 AI + + E + +++ N+ + SQ V LL+GIND PE Sbjct: 244 AISLHSADQLIRERMMPIAADITLDKLAKAINSYNSVTSQPVTLVYMLLEGINDSPEDAR 303 Query: 256 NLMR 259 L+R Sbjct: 304 KLVR 307 >gi|291556571|emb|CBL33688.1| SSU ribosomal protein S12P methylthiotransferase [Eubacterium siraeum V10Sc8a] Length = 446 Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 27/176 (15%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + P L++ C C +C + G + + E A + ++ + E++ Sbjct: 141 LQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKM-ENIIEEAKKF--AENGVKELV 197 Query: 149 FTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 D + L +LK L I ++ +R P+R+ ELI+ +K Sbjct: 198 IVAQDVTAYGIDLYKKYALPDLLKQLCKIDGIKWIRL----LYCYPERMTDELIETIKTE 253 Query: 204 GKPV-YIAIHANHPY-EF---------SEEAIAAISRLANA--GIILLSQSVLLKG 246 K + YI I H E + ++L G++L + L+ G Sbjct: 254 DKVLNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLR--TTLITG 307 >gi|167750131|ref|ZP_02422258.1| hypothetical protein EUBSIR_01100 [Eubacterium siraeum DSM 15702] gi|167656874|gb|EDS01004.1| hypothetical protein EUBSIR_01100 [Eubacterium siraeum DSM 15702] Length = 446 Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 33/176 (18%), Positives = 63/176 (35%), Gaps = 27/176 (15%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + P L++ C C +C + G + + E A + ++ + E++ Sbjct: 141 LQSTLPHYAYLRIADGCSNKCSYCAIPLIRGKMRSRKM-ENIIEEAKKF--AENGVKELV 197 Query: 149 FTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 D + L +LK L I ++ +R P+R+ ELI+ +K Sbjct: 198 IVAQDVTAYGIDLYKKYALPDLLKQLCKIDGIKWIRL----LYCYPERMTDELIETIKTE 253 Query: 204 GKPV-YIAIHANHPY-EF---------SEEAIAAISRLANA--GIILLSQSVLLKG 246 K + YI I H E + ++L G++L + L+ G Sbjct: 254 DKVLNYIDIPIQHCNKEILRNMYRGGDEQSLRELFAKLRREIPGVVLR--TTLITG 307 >gi|91201666|emb|CAJ74726.1| conserved hypothetical protein [Candidatus Kuenenia stuttgartiensis] Length = 356 Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 29/127 (22%), Positives = 54/127 (42%), Gaps = 15/127 (11%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQ--IW 145 IV +Y + + CP C FC + ++ G+ ++ K+ +A Y++ + I Sbjct: 22 IVKKYSNIPIFIPELACPHQCVFCNQAKISGTY--SIPQPKEIRHIVAQYLETIPENRII 79 Query: 146 EVIFTGGDPLILSHKRL-QKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLK 201 + F GG L ++ LK +K+ V +R +R P IN +++ LK Sbjct: 80 NIAFFGG-SFTGIPVDLQEQYLKEAYGFVKNGKVSGIRLSTR-----PDYINETILELLK 133 Query: 202 EAGKPVY 208 + G Sbjct: 134 KYGVTTI 140 >gi|331269617|ref|YP_004396109.1| MiaB family RNA modification protein [Clostridium botulinum BKT015925] gi|329126167|gb|AEB76112.1| RNA modification enzyme, MiaB family [Clostridium botulinum BKT015925] Length = 444 Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 49/119 (41%), Gaps = 22/119 (18%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTG 151 +++ C +C +C ++ G + + S K+ A + E+I G Sbjct: 147 AYIRISEGCDNFCTYCIIPKIRGKYRSRSIDSIVKEAKELSAM--------GVKELILVG 198 Query: 152 GDPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D I + +L ++++ + I+ ++ +R V P+ I ELI+ +K K Sbjct: 199 QDTAIYGRDIYNENKLPELIRAISEIEAIEWIR----VLYTYPEEITDELIEEIKSNDK 253 >gi|327542013|gb|EGF28512.1| ribosomal RNA large subunit methyltransferase N [Rhodopirellula baltica WH47] Length = 365 Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 77/237 (32%), Gaps = 52/237 (21%) Query: 94 PDRILLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIF 149 P R + V C + C FC + + + E L + ++ ++ Sbjct: 116 PRRSICVSSQVGCAMGCVFCASG--LDGVDRNLTGGEILEQMLRLQQRLPADERLSHIVM 173 Query: 150 TG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELIQCLKE 202 G G+PL L VL L + L P+RI P I L Sbjct: 174 MGMGEPL----ANLPGVLSALDVARSEDGLGI-------SPRRITISTVGLPPAIDKLAA 222 Query: 203 AGKP--VYIAIH------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 AG P + +++H N AA +G L + VLL GIN Sbjct: 223 AGIPYNLAVSLHAPNDELRSELVPVNRKIGIEPVLQAADRYFHASGRRLTFEYVLLGGIN 282 Query: 249 DDPEILANLMRTF----VELRIKPYYLHHPDLAAGTSHFRLT----IEEGQKIVASL 297 D E L + V + + PY + AG +R I + I+ S Sbjct: 283 DGDEHARQLSQILRGRSVMMNVIPY-----NPVAGLP-YRTPSGAAIARFRAILESA 333 >gi|317056861|ref|YP_004105328.1| MiaB-like tRNA modifying enzyme YliG [Ruminococcus albus 7] gi|315449130|gb|ADU22694.1| MiaB-like tRNA modifying enzyme YliG [Ruminococcus albus 7] Length = 443 Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 34/160 (21%), Positives = 58/160 (36%), Gaps = 20/160 (12%) Query: 79 GDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 G P++G ++ P +K+ C C +C + G K +D Sbjct: 128 GSKTDLPMEGGRLISTEPFFAYIKIAEGCSNCCTYCAIPAIRG--KFRSRKMEDILEEAK 185 Query: 137 YIQEKSQIWEVIFT------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 ++ E V+ G D + L ++LK L I + +R P+ Sbjct: 186 WLAEHGVTELVVIAQDTTRYGED--LYGKSMLPELLKKLCEIDGFKWIR----TLYSYPE 239 Query: 191 RINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISR 229 RI+ E I L K V YI + H + E + ++R Sbjct: 240 RISDEFIDVLASEEKLVKYIDMPIQH---CNAEILKRMNR 276 >gi|251778072|ref|ZP_04820992.1| putative thiazole biosynthesis protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243082387|gb|EES48277.1| putative thiazole biosynthesis protein [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 472 Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 5/117 (4%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREM 117 E IL E D + H K I + Y +RI+ L L + C C +C Sbjct: 49 SHREAAILLECDLDEEIEKIHDLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCTYCPYHHQ 108 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 L+ ++ + + +Q+ + TG DP+ + + + +KT+ IKH Sbjct: 109 NKHISRKKLTQEEIKREVIALQDMGHKRLALETGEDPINNPIEYVLESIKTIYSIKH 165 >gi|183220785|ref|YP_001838781.1| putative MiaB-like tRNA modifying enzyme [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189910885|ref|YP_001962440.1| 2-methylthioadenine synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|238066359|sp|B0SGD8|RIMO_LEPBA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|238066364|sp|B0SPT9|RIMO_LEPBP RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|167775561|gb|ABZ93862.1| 2-methylthioadenine synthetase [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779207|gb|ABZ97505.1| Putative MiaB-like tRNA modifying enzyme [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 448 Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 62/161 (38%), Gaps = 17/161 (10%) Query: 49 PHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY 108 ++ I R+ P E L E ED + S KGI + +K+ C Sbjct: 115 KYDKAGEILRKNFPL--EFKDLTEFNEDLLERLTTS--KGIENYSKPYSYVKISDGCNRG 170 Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQK 164 C FC + G + T + + LA +I + +F G D +L Sbjct: 171 CHFCIIPNLRGKYRDTDSNDVLEQTKLAVKAGSKEICLVSQDTVFYGKD-----TDKLMD 225 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +++++ ++ ++ILR + P + +L+ +E K Sbjct: 226 LVRSVAAVEGLEILRL----LYLYPDKKTEKLLDLYREIPK 262 >gi|160915016|ref|ZP_02077229.1| hypothetical protein EUBDOL_01023 [Eubacterium dolichum DSM 3991] gi|158432815|gb|EDP11104.1| hypothetical protein EUBDOL_01023 [Eubacterium dolichum DSM 3991] Length = 435 Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 52/125 (41%), Gaps = 12/125 (9%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151 + R LK+ C +C +C G+++ L+ + + + E++ TG Sbjct: 141 HQTRAFLKIQDGCNQFCSYCIIPYARGAER--SLAEDQVIESAKQLVNNQHL-EIVLTGI 197 Query: 152 --GDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 G + + L +LK L + ++ +R S ++ I+ ELI +KE + + Sbjct: 198 HTGRYGNGTGRNLLDLLKRLVAEVPKLRRIRISS----IEMNEISDELIAFMKEEPR-IA 252 Query: 209 IAIHA 213 +H Sbjct: 253 RHLHI 257 >gi|39997663|ref|NP_953614.1| MiaB-like tRNA modifying enzyme [Geobacter sulfurreducens PCA] gi|39984555|gb|AAR35941.1| MiaB-like tRNA modifying enzyme [Geobacter sulfurreducens PCA] gi|298506603|gb|ADI85326.1| MiaB-like tRNA-modifying enzyme [Geobacter sulfurreducens KN400] Length = 434 Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 42/127 (33%), Gaps = 17/127 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R L++ + C +C +C G + +D + EV+ T Sbjct: 140 HTRAFLQVQNGCDAFCSYCIVPHARGRSRSVPF--RDVLEGIGTF-AYQGFREVVLTGIH 196 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 G D + L +L+ V LR S V+P I+ LI + + Sbjct: 197 LGAYGAD--LEPPASLLDLLEAADAEALVPRLRVGS----VEPHEISDGLIALMARSPV- 249 Query: 207 VYIAIHA 213 + +H Sbjct: 250 ICPHLHI 256 >gi|32477801|ref|NP_870795.1| Fe-S-oxidoreductase [Rhodopirellula baltica SH 1] gi|81658686|sp|Q7UHU7|RLMN_RHOBA RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|32448358|emb|CAD77872.1| conserved hypothetical protein-putative Fe-S-oxidoreductase [Rhodopirellula baltica SH 1] Length = 371 Score = 40.9 bits (95), Expect = 0.34, Method: Composition-based stats. Identities = 51/237 (21%), Positives = 77/237 (32%), Gaps = 52/237 (21%) Query: 94 PDRILLKLLHV-CPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQEKSQIWEVIF 149 P R + V C + C FC + + + E L + ++ ++ Sbjct: 122 PRRSICVSSQVGCAMGCVFCASG--LDGVDRNLTGGEILEQMLRLQQRLPADERLSHIVM 179 Query: 150 TG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELIQCLKE 202 G G+PL L VL L + L P+RI P I L Sbjct: 180 MGMGEPL----ANLPGVLSALDVARSEDGLGI-------SPRRITISTVGLPPAIDKLAA 228 Query: 203 AGKP--VYIAIH------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 AG P + +++H N AA +G L + VLL GIN Sbjct: 229 AGIPYNLAVSLHAPNDELRSELVPVNRKIGIEPVLQAADRYFHASGRRLTFEYVLLGGIN 288 Query: 249 DDPEILANLMRTF----VELRIKPYYLHHPDLAAGTSHFRLT----IEEGQKIVASL 297 D E L + V + + PY + AG +R I + I+ S Sbjct: 289 DGDEHARQLSQILRGRSVMMNVIPY-----NPVAGLP-YRTPSGAAIARFRAILESA 339 >gi|329960232|ref|ZP_08298674.1| tRNA methylthiotransferase YqeV [Bacteroides fluxus YIT 12057] gi|328532905|gb|EGF59682.1| tRNA methylthiotransferase YqeV [Bacteroides fluxus YIT 12057] Length = 439 Score = 40.9 bits (95), Expect = 0.35, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 14/151 (9%) Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 HS R LK+ C YC +C + + E A Sbjct: 137 HSFAPSCSRGDRTRFFLKVQDGCDYYCSYCTI-PFARGRSRNGSIASLVEQARQ--AAAE 193 Query: 143 QIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 E++ TG GD + + ++K L ++ ++ R S ++P + E+I+ Sbjct: 194 GGREIVLTGVNIGDFGKTTGETFFDLVKALDEVEGIERYRISS----IEPNLLTEEIIEF 249 Query: 200 LKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229 + + + H + P S+E + + R Sbjct: 250 VSRSKR---FMPHFHIPLQSGSDEVLKLMRR 277 >gi|325525113|gb|EGD03003.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. TJI49] Length = 355 Score = 40.9 bits (95), Expect = 0.35, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F ++ +L+ ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYPFLPHSALLTHEEIERVARIFVAH-GVEKIRITGGE 99 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K L+ +++ L + Sbjct: 100 PLL--RKNLEFLIERLARL 116 >gi|228469810|ref|ZP_04054768.1| conserved hypothetical protein [Porphyromonas uenonis 60-3] gi|228308649|gb|EEK17400.1| conserved hypothetical protein [Porphyromonas uenonis 60-3] Length = 449 Score = 40.9 bits (95), Expect = 0.35, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 15/124 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151 R LK+ C YC +C G S+ G++ S +A + E+I TG Sbjct: 160 RTRHFLKVQDGCNYYCTYCTIPAARGVSRNGSIASLVAQAERVAELGG----REIILTGV 215 Query: 152 --GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GD + + L ++L L + + R S ++P+ + PE+IQ + E + Sbjct: 216 NIGDFGRSTGETLLELLHRLTQVAGIARYRIGS----IEPELLTPEIIQFVAETAQ---F 268 Query: 210 AIHA 213 H Sbjct: 269 MPHF 272 >gi|283785773|ref|YP_003365638.1| hypothetical protein ROD_20861 [Citrobacter rodentium ICC168] gi|282949227|emb|CBG88837.1| conserved hypothetical protein [Citrobacter rodentium ICC168] Length = 436 Score = 40.5 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 54/161 (33%), Gaps = 28/161 (17%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 RY L++ C C FC T E +A I + F Sbjct: 150 RYAPLALVQYSRGCRFACDFCSIHAFYPDGVRTRP----VEQIMAEIDALPGDRFIAFV- 204 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 D L S K+L+ +L+ L I ++ R+ ++ +D R + L+ L +AG + Sbjct: 205 DDNLFASRKKLESLLEAL--IP-LKR-RWGCQI-SIDVAR-DEALLDRLAQAGCGFVLMG 258 Query: 212 --------------HANHPYEFSEEAIAAISRLANAGIILL 238 NH + + I L GI + Sbjct: 259 FESLNPANLRQMGKQWNHA---AGDYRRVIRALHARGICVY 296 >gi|29832258|ref|NP_826892.1| hypothetical protein SAV_5715 [Streptomyces avermitilis MA-4680] gi|29609377|dbj|BAC73427.1| hypothetical protein [Streptomyces avermitilis MA-4680] Length = 723 Score = 40.5 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 16/126 (12%) Query: 97 ILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIWEVI 148 ++LK+ C + C C+ + + +++ + + + + + VI Sbjct: 13 LVLKIHSRCNLACDHCYVYEHEDQSWQARPVLIAEETLDKVAHRLAAYTVDRKLESVSVI 72 Query: 149 FTGGDPLILSHKRLQKVLKTLRYI-KHVQI--LRFHSRVPIVDPQRINPELIQCLKEAGK 205 GG+PL++ RL+ + LR + + LR H+ R+N ++ LKE Sbjct: 73 LHGGEPLLVGPTRLRNICAQLRSVLDPLTTLDLRIHTNGV-----RLNRAHLEILKEFDV 127 Query: 206 PVYIAI 211 V I++ Sbjct: 128 KVGISL 133 >gi|332300583|ref|YP_004442504.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Porphyromonas asaccharolytica DSM 20707] gi|332177646|gb|AEE13336.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Porphyromonas asaccharolytica DSM 20707] Length = 157 Score = 40.5 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C +C C E GT L+ + + I + + +GGDP + S + L Sbjct: 25 GCSHHCPGCHNPESHNPLVGTPLTEAYLQQIIDDINNNPLLDGITLSGGDP-MFSPEELL 83 Query: 164 KVLKTLRY 171 +LK L+ Sbjct: 84 TLLKRLKS 91 >gi|319650007|ref|ZP_08004156.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. 2_A_57_CT2] gi|317398188|gb|EFV78877.1| molybdenum cofactor biosynthesis protein A [Bacillus sp. 2_A_57_CT2] Length = 338 Score = 40.5 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 32/171 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C++C E+ G K +LS ++ E LA I + ++ TGG+ Sbjct: 19 ISVIDRCNFRCQYCMPAEVFGPDFAFLPKNELLSYEEIER-LAKIFVSLGVEKIRLTGGE 77 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+ + K++K L I+ ++ + + ++ P+ LKEAG V + I Sbjct: 78 PLMRKD--MPKLVKMLSDIEGLKDIGLTTNG-VLLPKHAKD-----LKEAGL-VRVNISL 128 Query: 214 NHPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDD 250 +E + I AG+ + V+ KG+ND Sbjct: 129 ---DSLDDELFGKINGRNVGVKPVLKGIEAAKEAGLGVKLNMVVKKGLNDS 176 >gi|255280937|ref|ZP_05345492.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bryantella formatexigens DSM 14469] gi|255268385|gb|EET61590.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bryantella formatexigens DSM 14469] Length = 518 Score = 40.5 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 52/127 (40%), Gaps = 22/127 (17%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + +YP + + ++ C +C +C + G ++ ++ + + + EV+ Sbjct: 221 VERKYPFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--REILREIERLAAD-GVVEVM 277 Query: 149 FTGGD----------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 G + P+ ++L+ + I ++ +RF + P+ ++ ELI+ Sbjct: 278 LLGQNVNSYGKNLPEPMSF-----AQLLREVEKIDGIKRIRFMTSH----PKDLSDELIE 328 Query: 199 CLKEAGK 205 + + K Sbjct: 329 VMASSEK 335 >gi|53713716|ref|YP_099708.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46] gi|60681987|ref|YP_212131.1| putative oxidoreductase [Bacteroides fragilis NCTC 9343] gi|81314949|sp|Q5LCF8|RIMO_BACFN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|81382384|sp|Q64TK5|RIMO_BACFR RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|52216581|dbj|BAD49174.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46] gi|60493421|emb|CAH08207.1| putative oxidoreductase [Bacteroides fragilis NCTC 9343] Length = 432 Score = 40.5 bits (94), Expect = 0.35, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPI--EEILDEVRYLVSNGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + + L ++++ + I V+ +R H P EL + ++E Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPEELFRVMRER 242 >gi|322806790|emb|CBZ04359.1| fe-S oxidoreductase, related to NifB/MoaA family with PDZ N-terminal domain [Clostridium botulinum H04402 065] Length = 444 Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L + C C FCF ++ + T+ D ++ L+++Q + T Sbjct: 79 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215 + + + +++ I + + H+ +P+ R+ +L+ Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 F+ + +LA GI + Q VL G+N + E L + L Sbjct: 163 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209 >gi|229825163|ref|ZP_04451232.1| hypothetical protein GCWU000182_00514 [Abiotrophia defectiva ATCC 49176] gi|229790535|gb|EEP26649.1| hypothetical protein GCWU000182_00514 [Abiotrophia defectiva ATCC 49176] Length = 479 Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 10/98 (10%) Query: 92 RYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQI 144 ++ + ++ L + H C + CR+CF E ++S + +AA ++ + Sbjct: 101 KHRNTVVKALCLNIAHDCNLACRYCFAGEGEYQGDRGMMSYEVGKAAFDFLIKNSGHRKN 160 Query: 145 WEVIFTGGDPLI--LSHKRLQKVLKTLRYIKHVQILRF 180 EV F GG+PL+ + K L + L I H + RF Sbjct: 161 LEVDFFGGEPLMNWNTVKMLVAYGRELEKI-HDKNFRF 197 >gi|226949876|ref|YP_002804967.1| hypothetical protein CLM_2825 [Clostridium botulinum A2 str. Kyoto] gi|226844173|gb|ACO86839.1| conserved hypothetical protein [Clostridium botulinum A2 str. Kyoto] Length = 454 Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L + C C FCF ++ + T+ D ++ L+++Q + T Sbjct: 89 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 138 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215 + + + +++ I + + H+ +P+ R+ +L+ Sbjct: 139 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 172 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 F+ + +LA GI + Q VL G+N + E L + L Sbjct: 173 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 219 >gi|182701775|ref|ZP_02615257.2| conserved hypothetical protein [Clostridium botulinum NCTC 2916] gi|182668614|gb|EDT80593.1| conserved hypothetical protein [Clostridium botulinum NCTC 2916] Length = 454 Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L + C C FCF ++ + T+ D ++ L+++Q + T Sbjct: 89 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 138 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215 + + + +++ I + + H+ +P+ R+ +L+ Sbjct: 139 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 172 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 F+ + +LA GI + Q VL G+N + E L + L Sbjct: 173 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 219 >gi|170760297|ref|YP_001787837.1| hypothetical protein CLK_1904 [Clostridium botulinum A3 str. Loch Maree] gi|169407286|gb|ACA55697.1| conserved hypothetical protein [Clostridium botulinum A3 str. Loch Maree] Length = 444 Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L + C C FCF ++ + T+ D ++ L+++Q + T Sbjct: 79 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215 + + + +++ I + + H+ +P+ R+ +L+ Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 F+ + +LA GI + Q VL G+N + E L + L Sbjct: 163 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209 >gi|153939159|ref|YP_001391818.1| hypothetical protein CLI_2583 [Clostridium botulinum F str. Langeland] gi|152935055|gb|ABS40553.1| conserved hypothetical protein [Clostridium botulinum F str. Langeland] gi|295319843|gb|ADG00221.1| conserved hypothetical protein [Clostridium botulinum F str. 230613] Length = 444 Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L + C C FCF ++ + T+ D ++ L+++Q + T Sbjct: 79 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215 + + + +++ I + + H+ +P+ R+ +L+ Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 F+ + +LA GI + Q VL G+N + E L + L Sbjct: 163 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209 >gi|148380477|ref|YP_001255018.1| hypothetical protein CBO2520 [Clostridium botulinum A str. ATCC 3502] gi|153931168|ref|YP_001384701.1| hypothetical protein CLB_2397 [Clostridium botulinum A str. ATCC 19397] gi|153937400|ref|YP_001388222.1| hypothetical protein CLC_2379 [Clostridium botulinum A str. Hall] gi|148289961|emb|CAL84074.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC 3502] gi|152927212|gb|ABS32712.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC 19397] gi|152933314|gb|ABS38813.1| conserved hypothetical protein [Clostridium botulinum A str. Hall] Length = 444 Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 62/169 (36%), Gaps = 39/169 (23%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L + C C FCF ++ + T+ D ++ L+++Q + T Sbjct: 79 AILDVPQRCHNNCLFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FLTLT-----N 128 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215 + + + +++ I + + H+ +P+ R+ +L+ Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 F+ + +LA GI + Q VL G+N + E L + L Sbjct: 163 -NRFAGNLYDRMKKLAQGGIKMDCQVVLCPGLN-NGEELKRTIEDLYAL 209 >gi|24211989|sp|Q8Y0K4|MOAA_RALSO RecName: Full=Molybdenum cofactor biosynthesis protein A Length = 345 Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 7/77 (9%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F ++ Q +LS ++ E + E + ++ TGG+ Sbjct: 20 ISVTDRCNFRCIYCMPKDVFDKDYRFLQHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 78 Query: 154 PLILSH-KRLQKVLKTL 169 PL+ +RL ++L L Sbjct: 79 PLLRKDIERLVEMLARL 95 >gi|317125950|ref|YP_004100062.1| radical SAM protein [Intrasporangium calvum DSM 43043] gi|315590038|gb|ADU49335.1| Radical SAM domain protein [Intrasporangium calvum DSM 43043] Length = 406 Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 69/184 (37%), Gaps = 38/184 (20%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGG 152 P + ++ C + C+ C M G+ G L+ + + + + + ++ TGG Sbjct: 18 PMLVFWEVTRACQLACKHCRANAMAGALPGE-LNHEQGLDLIDQVAAFGRPYPILVLTGG 76 Query: 153 DPLILSHKRLQKVLK--TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 D L+ + ++++ R I P V PQ + PE I + ++G Sbjct: 77 DCLLRPD--IWELVEASRARGIPTAL-------SPSVTPQ-LTPETIARMVDSGINAVSI 126 Query: 209 ---------------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 I H + I AI L++AG+ + + ++K D+ Sbjct: 127 SLDGACAATHDGVRGIPGHF-------ADTIPAIRALSDAGLTVQINTTVMKSNLDELAD 179 Query: 254 LANL 257 +A L Sbjct: 180 VAKL 183 >gi|18976462|ref|NP_577819.1| molybdenum cofactor biosynthesis protein A [Pyrococcus furiosus DSM 3638] gi|24211985|sp|Q8U4J5|MOAA_PYRFU RecName: Full=Probable molybdenum cofactor biosynthesis protein A gi|18892001|gb|AAL80214.1| molybdenum cofactor biosynthesis protein [Pyrococcus furiosus DSM 3638] Length = 307 Score = 40.5 bits (94), Expect = 0.36, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 59/172 (34%), Gaps = 44/172 (25%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + L C + C +C R ++ ++ E + I + I V TGG+P + Sbjct: 15 ISLTKECNLNCFYCHREGQ--QDGERTMTPEEIERIVR-IASRLGIRNVKLTGGEPTVRP 71 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL----------IQCLKEAGKPVY 208 + I +Q +R P ++ + + LKEAG Sbjct: 72 D---------IYEI--IQRIR---------PYVVDLSMTTNGTTLYASAEKLKEAGLD-R 110 Query: 209 IAIHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + I + ++ + I R N + V+++GINDD Sbjct: 111 VNISLDTLDRKKYKMITGYDVLDQVLKGIRRATNLFYPVKLNMVVMRGINDD 162 >gi|332158286|ref|YP_004423565.1| molybdenum cofactor biosynthesis protein A [Pyrococcus sp. NA2] gi|331033749|gb|AEC51561.1| molybdenum cofactor biosynthesis protein A [Pyrococcus sp. NA2] Length = 306 Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 32/166 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + L C + C +C R + +++ + E + I + I +V TGG+P I Sbjct: 15 ISLTKECNLSCFYCHREGQ--GEGEREMTADEIERIVK-IASRLGIRKVKLTGGEPTIRK 71 Query: 159 HKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAG------------- 204 +++ +R I +V L + + L + LKEAG Sbjct: 72 D-----IIEIVRKIRPYVVDLSLTTNGTTLY------SLAEKLKEAGLDRVNISLDTLDR 120 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 K + + ++ + I + + V+++GINDD Sbjct: 121 KKYKMITGFD----VLDQVLKGIRKATKLFYPVKLNMVVMRGINDD 162 >gi|295702571|ref|YP_003595646.1| hypothetical protein BMD_0385 [Bacillus megaterium DSM 319] gi|294800230|gb|ADF37296.1| conserved hypothetical protein [Bacillus megaterium DSM 319] Length = 372 Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 31 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPLDLILKRLDEI---PTLRALSITGGEP-M 86 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 +S ++ + L H + +R +IN L L + P +H + Sbjct: 87 MSLSSVKNYVVPLLKYAHERGVR----------TQINSNLTLDLARYEQIIPYLDVLHIS 136 Query: 215 H 215 H Sbjct: 137 H 137 >gi|253565664|ref|ZP_04843119.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|265764040|ref|ZP_06092608.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16] gi|251945943|gb|EES86350.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|263256648|gb|EEZ27994.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16] Length = 432 Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPI--EEILDEVRYLVSNGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + + L ++++ + I V+ +R H P EL + ++E Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPEELFRVMRER 242 >gi|85859749|ref|YP_461951.1| radical SAM protein [Syntrophus aciditrophicus SB] gi|123752486|sp|Q2LUM5|RLMN_SYNAS RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|85722840|gb|ABC77783.1| radical SAM family enzyme [Syntrophus aciditrophicus SB] Length = 348 Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 42/191 (21%), Positives = 68/191 (35%), Gaps = 28/191 (14%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG-G 152 + C + CRFCF G ++ S Y+ E +I ++ G G Sbjct: 105 TACISTQVGCHMGCRFCFTARQ-GFRRNLKPSEITGQLTMLQFYLPEGPEIKNIVMMGMG 163 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-- 210 +PL L+ + R I L F +R + I P +++ G+ + I Sbjct: 164 EPLANYRNTLKAI----RIITSDYGLGFSTRKITLSTSGITP----MIEQLGRDLCINLA 215 Query: 211 IHANHP-----YEFSEEAIAA-ISRLANA-------GIILLS-QSVLLKGINDDPEILAN 256 I N P E + RL A G +L+ + +L+ G+N P Sbjct: 216 ISLNAPTDSIRSELMPVNRKYPLDRLLQACRNYPMPGRRMLTFEYILIDGVNSSPAHAEM 275 Query: 257 LMRTFVELRIK 267 L R +R K Sbjct: 276 LCRLLKGIRCK 286 >gi|294497200|ref|YP_003560900.1| hypothetical protein BMQ_0384 [Bacillus megaterium QM B1551] gi|294347137|gb|ADE67466.1| conserved hypothetical protein [Bacillus megaterium QM B1551] Length = 372 Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 40/121 (33%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 31 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPLDLILKRLDEI---PTLRALSITGGEP-M 86 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 +S ++ + L H + +R +IN L L + P +H + Sbjct: 87 MSLSSVKNYVVPLLKYAHERGVR----------TQINSNLTLDLARYEQIIPYLDVLHIS 136 Query: 215 H 215 H Sbjct: 137 H 137 >gi|111225093|ref|YP_715887.1| hypothetical protein FRAAL5734 [Frankia alni ACN14a] gi|122953811|sp|Q0RDV0|RIMO_FRAAA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|111152625|emb|CAJ64366.1| Conserved hypothetical protein [Frankia alni ACN14a] Length = 545 Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 29/139 (20%), Positives = 47/139 (33%), Gaps = 16/139 (11%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 LK+ C C FC FR V VL+ + A + G Sbjct: 189 AALKISSGCDRRCAFCAIPSFRGSHVSRPADDVLAEAEWLAGEGARELVLVSENSTSYGK 248 Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ-CLKEAGKPVYIA 210 D L + L+K+L L + + +R + P + P L++ L G Y+ Sbjct: 249 D---LGDLRALEKLLPQLAAVPGIVRVR----TVYLQPAELRPSLLEVLLTTPGLAPYLD 301 Query: 211 IHANHPYEFSEEAIAAISR 229 + H S + + R Sbjct: 302 LSFQHA---SPAVLRRMRR 317 >gi|301057214|ref|ZP_07198343.1| radical SAM domain protein [delta proteobacterium NaphS2] gi|300448665|gb|EFK12301.1| radical SAM domain protein [delta proteobacterium NaphS2] Length = 341 Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 41/191 (21%), Positives = 69/191 (36%), Gaps = 26/191 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156 +L C + C C GS++G DT+ L +Q+ Q+ VI TGG+PL Sbjct: 3 WELTRKCNLNCVHC----RAGSERGPYPGELDTKKCLEILQQIQQVGNPIVILTGGEPL- 57 Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L++ + L LR + ++ PQRI +K + A Sbjct: 58 -----LREDIFDLAKAGTEMGLRMVMATNGTLMTPQRIAQMKASGIKRLSISIDGATAEQ 112 Query: 215 HP--YEFSEEAIAAISRLANAGIILLSQSVLLKGIND-----DPEILANLMRTFVELRIK 267 H + A+ GI LL++ L IN + L ++ V+L Sbjct: 113 HDAFRKVPGAFERAME-----GIGLLNEHGLEFQINTTVSRHNVNELEKILNLTVKLGAV 167 Query: 268 PYYLHHPDLAA 278 +++ Sbjct: 168 AHHIFLLVPTG 178 >gi|255009413|ref|ZP_05281539.1| putative oxidoreductase [Bacteroides fragilis 3_1_12] gi|313147172|ref|ZP_07809365.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313135939|gb|EFR53299.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 432 Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 14/113 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVRYLVSNGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GVD--LYKKQMLPELIERVSEIPGVEWIRLH----YAYPAHFPEDLFRVMRER 242 >gi|168187871|ref|ZP_02622506.1| conserved hypothetical protein [Clostridium botulinum C str. Eklund] gi|169294276|gb|EDS76409.1| conserved hypothetical protein [Clostridium botulinum C str. Eklund] Length = 433 Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 22/127 (17%), Positives = 37/127 (29%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C + + + EVI +G D Sbjct: 141 KTRAFLKIQDGCNNFCSYCLI-PFARGAVCSKNPKIVIDEVKK-LAAH-GFKEVILSGID 197 Query: 154 PLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--QCLKEAGKP 206 L +LK + I + +R S I PE +++ G Sbjct: 198 ISSYGVDLEGDWNLLNILKEIDKIDGITRVRIGS---------IGPEFFNEDRIRQIGNL 248 Query: 207 VYIAIHA 213 + H Sbjct: 249 KKLCPHF 255 >gi|256811095|ref|YP_003128464.1| Radical SAM domain protein [Methanocaldococcus fervens AG86] gi|256794295|gb|ACV24964.1| Radical SAM domain protein [Methanocaldococcus fervens AG86] Length = 426 Score = 40.5 bits (94), Expect = 0.37, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 47/124 (37%), Gaps = 15/124 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPL- 155 +++ CP C FC + G + + E Y I + + ++ F + Sbjct: 177 IEITRGCPYSCYFCQTPRIFGKN----VRHRSIENICKYVEIMAERNLKDIRFITPNAFG 232 Query: 156 -------ILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 L+ +++K+L+ +R I + F + V P+ +N E + + + Sbjct: 233 YGSKDGKTLNIDKIEKLLENIREILGKDGRIFFGTFPSEVRPEHVNDETVDLILKYADNK 292 Query: 208 YIAI 211 + I Sbjct: 293 NLVI 296 >gi|229082873|ref|ZP_04215297.1| antilisterial bacteriocin (subtilosin) production [Bacillus cereus Rock4-2] gi|228700411|gb|EEL52973.1| antilisterial bacteriocin (subtilosin) production [Bacillus cereus Rock4-2] Length = 462 Score = 40.5 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Query: 79 GDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 + + P+ I + YP +++ + C V CR C+ G+ K V+S ++ L Sbjct: 106 EEPINVPVNLIEEQTIYPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSLDQIKSLLD 163 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 + + + TGGD + + L+++L Sbjct: 164 DL-NNIGVKLIELTGGDITVHPN--LKEIL 190 >gi|221642191|ref|YP_002533278.1| ywiA protein [Bacillus cereus Q1] gi|221243126|gb|ACM15835.1| ywiA protein [Bacillus cereus Q1] Length = 462 Score = 40.5 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Query: 79 GDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 + + P+ I + YP +++ + C V CR C+ G+ K V+S ++ L Sbjct: 106 EEPINVPVNLIEEQTIYPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSLDQIKSLLD 163 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 + + + TGGD + + L+++L Sbjct: 164 DL-NNIGVKLIELTGGDITVHPN--LKEIL 190 >gi|170696802|ref|ZP_02887909.1| molybdenum cofactor biosynthesis protein A [Burkholderia graminis C4D1M] gi|170138291|gb|EDT06512.1| molybdenum cofactor biosynthesis protein A [Burkholderia graminis C4D1M] Length = 369 Score = 40.5 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + +L+ ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYAFLPHSALLTFEEIERLARLFVAH-GVEKIRLTGGE 99 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K L+ +++ L + Sbjct: 100 PLL--RKNLEFLIERLAQL 116 >gi|206973072|ref|ZP_03233994.1| radical SAM domain protein [Bacillus cereus AH1134] gi|206731956|gb|EDZ49156.1| radical SAM domain protein [Bacillus cereus AH1134] gi|262358192|gb|ACY56718.1| ThnB [Bacillus thuringiensis] Length = 459 Score = 40.5 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 7/90 (7%) Query: 79 GDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 + + P+ I + YP +++ + C V CR C+ G+ K V+S ++ L Sbjct: 103 EEPINVPVNLIEEQTIYPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSLDQIKSLLD 160 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 + + + TGGD + + L+++L Sbjct: 161 DL-NNIGVKLIELTGGDITVHPN--LKEIL 187 >gi|114766591|ref|ZP_01445547.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Pelagibaca bermudensis HTCC2601] gi|114541207|gb|EAU44259.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. HTCC2601] Length = 435 Score = 40.5 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 5/104 (4%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 L + C +C FC G++ + + + A ++ + ++ + Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRVLTEARDLVERGVRELTLLGQNVNAY 208 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + L +++ L I ++ +RF + P ++ +LI Sbjct: 209 HGHDRGLAGLIRELAKIDGLERIRFTTSHPND----MDDDLIAA 248 >gi|194466736|ref|ZP_03072723.1| molybdenum cofactor biosynthesis protein A [Lactobacillus reuteri 100-23] gi|194453772|gb|EDX42669.1| molybdenum cofactor biosynthesis protein A [Lactobacillus reuteri 100-23] Length = 332 Score = 40.5 bits (94), Expect = 0.38, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 4/89 (4%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R D + L + C + C +C + + ++S + + + +V Sbjct: 9 QRKIDYLRLSITDRCNLRCVYCMPAAGLDFFSQDKIMSQDEIVRLVQNFAR-LGVTKVRL 67 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 TGG+PL+ L ++ +R I + + Sbjct: 68 TGGEPLLRRD--LATIIYRIRQIPEITDI 94 >gi|330838563|ref|YP_004413143.1| molybdenum cofactor biosynthesis protein A [Selenomonas sputigena ATCC 35185] gi|329746327|gb|AEB99683.1| molybdenum cofactor biosynthesis protein A [Selenomonas sputigena ATCC 35185] Length = 328 Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 28/171 (16%), Positives = 66/171 (38%), Gaps = 23/171 (13%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R + + + + C + CR+C + V +LS ++ + + + I +V Sbjct: 6 RRKIEYVRISVTDRCNLRCRYCMPADGVEKLSHADILSFEEIVRVVRALAQ-LGIRKVRL 64 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 TGG+PL+ + + +++ ++ ++ ++ + + + +L + L+ AG + Sbjct: 65 TGGEPLL--RRGVVDLVREIKAVEGIERVALTTNGV------LLADLAEELRAAGLD-GV 115 Query: 210 AIHANHPYE------------FSEEAIAAISRLANAGIILLSQSVLLKGIN 248 I + E + AG+ V LKG+N Sbjct: 116 NISLDTLAEDAFYDITRRSASLLSVVRQGMEAALAAGLKTKLNCVPLKGVN 166 >gi|315650922|ref|ZP_07903963.1| molybdenum cofactor biosynthesis protein A [Eubacterium saburreum DSM 3986] gi|315486836|gb|EFU77177.1| molybdenum cofactor biosynthesis protein A [Eubacterium saburreum DSM 3986] Length = 323 Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 30/168 (17%), Positives = 60/168 (35%), Gaps = 21/168 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R D + + + + C C +C T+ + + A A K I + TG Sbjct: 7 RKIDYMRISVTNRCNFRCTYC--MPETKKVDDTLSLDEIYQVAFA--ASKCGITKFKITG 62 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+PL+ + ++ L I V+ + + + + L +AG Sbjct: 63 GEPLV--RDGIVDFIRRLHDIDSVKDITMTTNGFYLYKY------AKSLADAGLSSVNIS 114 Query: 212 HANHPYE----FSE-----EAIAAISRLANAGIILLSQSVLLKGINDD 250 + E + + + I+ AG+ +VL +G+N+D Sbjct: 115 LDSLKKERFIKITGVDALSDVVKGINEAKRAGLSTKINTVLQRGVNED 162 >gi|87119366|ref|ZP_01075264.1| hypothetical protein MED121_13890 [Marinomonas sp. MED121] gi|86165757|gb|EAQ67024.1| hypothetical protein MED121_13890 [Marinomonas sp. MED121] Length = 438 Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 40/123 (32%), Gaps = 15/123 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + ++ C YC FC G + + E + + E+ G + Sbjct: 135 AFVSIMEGCSKYCTFCVVPYTRGEEVSRPFTDILVEVMQ---LAEQGVREIHLLGQNVNA 191 Query: 157 L-------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + L V+ + I V+ +RF + P+ LI+ + K + Sbjct: 192 YRGVDNEGTESDLADVISAIAQIDGVERIRFTTSHPV----EFTDSLIEAFRNIPK-LVS 246 Query: 210 AIH 212 +H Sbjct: 247 HLH 249 >gi|320161621|ref|YP_004174846.1| hypothetical protein ANT_22200 [Anaerolinea thermophila UNI-1] gi|319995475|dbj|BAJ64246.1| hypothetical protein ANT_22200 [Anaerolinea thermophila UNI-1] Length = 798 Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 49/114 (42%), Gaps = 9/114 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + CP+ C C+ R G + K E A ++ + TGG+PL+ Sbjct: 451 LHITFECPLRCNHCYARG--GRHSPAFPAEKAIELAQQ--ASRAGFRHFVITGGEPLVHP 506 Query: 159 HKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + +L+ L ++ + +R R +V P ++ E ++ L A V +++ Sbjct: 507 --EIFPLLEHLEGLQQDLSPMRIVLRTSLVSP--LSDEPMRLLANAPHEVVVSL 556 Score = 40.1 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 54/150 (36%), Gaps = 15/150 (10%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGGDPLI 156 ++ CP C++CF QK ++ + E +++ E+ E+ F GG+PL Sbjct: 8 MIVPSSGCPASCQYCFGPH----QKDKTMNKQVLERTASWLGEEKASTLEITFHGGEPLT 63 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI----H 212 K + L+ + +RF+ + + +N LI E + ++ H Sbjct: 64 AGVKFFRNAFDVLQNQNPEKNIRFNLQSNLWL---LNDALIDLFAEHRVSMGTSLDGPEH 120 Query: 213 ANHPYEFSEEAIA---AISRLANAGIILLS 239 N I + G+ + Sbjct: 121 INDAQRGKGYFRRTMLGIEKARRKGLAVGC 150 >gi|307730932|ref|YP_003908156.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. CCGE1003] gi|307585467|gb|ADN58865.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. CCGE1003] Length = 461 Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 26/138 (18%) Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143 H P R+ + ++ C YC +C V S+ + L I Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192 Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 + EV G + L L + +++ + I ++ +R+ + P+ Sbjct: 193 VREVTLLGQNVNAFRGALTLGSSEIADFATLIEYVAEIPGIERIRYTTSH----PKEFTQ 248 Query: 195 ELIQCLKEAGKPVYIAIH 212 LI + K + +H Sbjct: 249 RLIDTYAKVPK-LVSHLH 265 >gi|282600941|ref|ZP_05980225.2| 2-methylthioadenine synthetase [Subdoligranulum variabile DSM 15176] gi|282570102|gb|EFB75637.1| 2-methylthioadenine synthetase [Subdoligranulum variabile DSM 15176] Length = 465 Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 37/114 (32%), Gaps = 8/114 (7%) Query: 94 PDRILLKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R +K+ C C +C R + ++ +I + Sbjct: 174 HTRAFVKVEDGCNRRCAYCVIPRARGPVRSREESSILQELHRLTE--AGYKEIVLTAISL 231 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 S L ++++ + V+ LR S +DP ++ E+I L K Sbjct: 232 PSYGTDSGTSLVELVEKAAAVPGVERLRLGS----LDPDMLHDEVILRLSRVKK 281 >gi|222445702|ref|ZP_03608217.1| hypothetical protein METSMIALI_01343 [Methanobrevibacter smithii DSM 2375] gi|261349749|ref|ZP_05975166.1| putative molybdenum cofactor biosynthesis protein A [Methanobrevibacter smithii DSM 2374] gi|222435267|gb|EEE42432.1| hypothetical protein METSMIALI_01343 [Methanobrevibacter smithii DSM 2375] gi|288861704|gb|EFC94002.1| putative molybdenum cofactor biosynthesis protein A [Methanobrevibacter smithii DSM 2374] Length = 309 Score = 40.5 bits (94), Expect = 0.39, Method: Composition-based stats. Identities = 34/189 (17%), Positives = 70/189 (37%), Gaps = 27/189 (14%) Query: 92 RYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 +Y IL + + + C C +C +++ + I + + ++ Sbjct: 9 KYERPILSLRITITNKCNENCLYC--HHDGMDDSQEEMNADEIYRICE-IAKNIGVRKIR 65 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-V 207 +GG+PLI + +++ + + I I + + + LKEAG V Sbjct: 66 ISGGEPLIRKD--IVEIVSKIASLDFDDI-------SITSNGTLLGKYAKDLKEAGLNRV 116 Query: 208 YIAIHANHP--------YEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258 I++ +P E A I + G+ + VL+KGIN++ + ++ Sbjct: 117 NISLDTLNPETYKKVTTKNLLESAKNGILKAVEVGLYPVKINMVLMKGINEN--EVDDMF 174 Query: 259 RTFVELRIK 267 E I Sbjct: 175 EFCKEHGII 183 >gi|238924259|ref|YP_002937775.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale ATCC 33656] gi|238875934|gb|ACR75641.1| MiaB-like tRNA modifying enzyme [Eubacterium rectale ATCC 33656] Length = 434 Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 28/162 (17%), Positives = 54/162 (33%), Gaps = 32/162 (19%) Query: 70 LPEEREDPIGDNNHSPLKGIVH----------RYPDRILLKLLHVCPVYCRFCFRREMVG 119 L E D + D G H + R +K+ C +C +C G Sbjct: 109 LEEYSLDSVNDTVDDINDG-KHDFEELFIDQTKEHTRAFIKVQDGCNQFCSYCIIPYARG 167 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRY 171 + ++ A + + EV+ TG LS L ++++ + Sbjct: 168 RVRSRRF--ENVIAEVERLAAN-GFKEVVLTGI---HLSSYGVDFEEAVGLLELIQAVNA 221 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 +K ++ +R S ++P+ + L + K I H Sbjct: 222 VKGIERIRLGS----LEPKIVTEHFASELSKLDK---ICPHF 256 >gi|256830160|ref|YP_003158888.1| Radical SAM domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256579336|gb|ACU90472.1| Radical SAM domain protein [Desulfomicrobium baculatum DSM 4028] Length = 399 Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 36/212 (16%), Positives = 77/212 (36%), Gaps = 40/212 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156 ++ C + C+ C + +G + DT A A I Q+ +IFTGGDP++ Sbjct: 57 WEVTRSCNLACKHCRAEAHLEPYEGEL----DTAEAKALIDTFPQVGNPIIIFTGGDPMM 112 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHS-RVP--IVDPQ--RINPELIQCLKEAGKPVYIAI 211 + +++R+ + + ++ P I P+ + ++EAG +I Sbjct: 113 RADVY--------------ELIRYATDKGLRCVMSPNGTLITPDTARQMREAGVQ-RCSI 157 Query: 212 HANHPY-EFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 + P E +E I L +AGI + + + + + +L Sbjct: 158 SIDGPDAESHDEFRGVQGAFDASMRGIQYLKDAGIEFQVNTTVTRANLGSFKKIFDLCE- 216 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 + +++ + + GQ+ Sbjct: 217 --RIGAVAWHIFLLVPTGRAAQLGAEVITGQE 246 >gi|332797245|ref|YP_004458745.1| Fe-S oxidoreductase family [Acidianus hospitalis W1] gi|332694980|gb|AEE94447.1| Fe-S oxidoreductase family [Acidianus hospitalis W1] Length = 351 Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 51/298 (17%), Positives = 104/298 (34%), Gaps = 62/298 (20%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R P + ++ CP+ C+ C R + L++ + + L I ++ V+FTG Sbjct: 5 RAPHLVFWEVTKACPLACKHC-RANAIQDPLPGELTTAEGKKLLEEISTFGKV-VVVFTG 62 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIA 210 GDPL S + +++ + + V + P P ++N + I+ +KE+G Y++ Sbjct: 63 GDPL--SRDDIFELMDYAKQLGLVTSI-----APA--PSYKLNEDTIRKIKESGVT-YMS 112 Query: 211 IHANHPYEFSEEAIAAISRL-------------ANAGIILLSQSVLLKGINDDPEILANL 257 I + E + L G+I+ +++ KG L + Sbjct: 113 ISLDGAK---PETHDWLRGLTSYKYAINGIKEGLKQGLIVQVNTLIWKG---SYPELPQI 166 Query: 258 MRTFVELRIKPYYLHHPDLA-AGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP-- 314 + +L +K + + G+ + E +K+V L E +S ++ P Sbjct: 167 AKILHDLGVKVWEIFFLIPVGRGSIELDIPKENYKKVVNFLLE-VSKYNIIVRTVEGPFF 225 Query: 315 ------------------------GGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDYP 348 G K+ +D + + + YP Sbjct: 226 RRAKLEYPEGFEDNELIEELRKLLGKPPKMDVDKSIVPTRDGSGVIFISYDGEI--YP 281 >gi|291531040|emb|CBK96625.1| Coproporphyrinogen III oxidase and related Fe-S oxidoreductases [Eubacterium siraeum 70/3] Length = 480 Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 26/143 (18%), Positives = 52/143 (36%), Gaps = 21/143 (14%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS---------SKDTEAALAYIQEKS-QIWEV 147 L + CP C +C + + L K+ + ++ S ++ V Sbjct: 160 LYISIPFCPSRCSYCS---FISASGEGALKLIDDYFGLLLKELDIYADIVKRFSLKVDTV 216 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KP 206 GG P LS +L +++ L + +R + P I + ++ LK G + Sbjct: 217 YIGGGTPTTLSASQLDRLIDKLGEFD-IANIREFT-AEAGRPDTITEDKLRTLKNGGVRR 274 Query: 207 VYIAIHANHPYEFSEEAIAAISR 229 + I P ++ + A+ R Sbjct: 275 ISIN-----PQSMNDSVLEAVGR 292 >gi|257075637|ref|ZP_05569998.1| molybdenum cofactor biosynthesis protein A [Ferroplasma acidarmanus fer1] Length = 315 Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 71/167 (42%), Gaps = 30/167 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGT-VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 ++L +C +C FC M G+++ ++ + E +A + + ++ FTGG+PL+ Sbjct: 23 IQLNAICNFHCIFC---HMEGTERSMQYMTPEQIENVVA-VAASHGVNKIKFTGGEPLLR 78 Query: 158 SHKRLQKVLKTLRYI-KHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAI- 211 +L+ +R KH+ + + + P +L + LKEAG + + Sbjct: 79 ED-----ILEIVRRTRKHITGNISLTTNG-VELP-----KLAKGLKEAGLDRVNISMHAI 127 Query: 212 -----HA--NHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 H + F I +AG+ + VL+K IN+D Sbjct: 128 DEYNFHFITDTKKNFLPIVKQGIQAARDAGLGPIKINFVLMKNINED 174 >gi|46447392|ref|YP_008757.1| 2-methylthioadenine synthetase [Candidatus Protochlamydia amoebophila UWE25] gi|81626503|sp|Q6MAB7|MIAB_PARUW RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|46401033|emb|CAF24482.1| probable 2-methylthioadenine synthetase [Candidatus Protochlamydia amoebophila UWE25] Length = 450 Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 47/126 (37%), Gaps = 18/126 (14%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153 + + ++ C +C +C V S+ E L + E+ G + Sbjct: 159 KAYVSIIRGCDKFCTYC-----VVPYTRGSEVSRAPENILEECRHLVNQGYKEITLLGQN 213 Query: 154 PLILSHKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 +L+ +L L I ++ +RF + P+ I+ EL++ +++ K + Sbjct: 214 VNSYGKDKLEWKCLFHDLLYQLDKIPGLERVRFMTSHPVD----ISKELMEAIRDL-KTL 268 Query: 208 YIAIHA 213 +H Sbjct: 269 CEFVHF 274 >gi|325107255|ref|YP_004268323.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Planctomyces brasiliensis DSM 5305] gi|324967523|gb|ADY58301.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Planctomyces brasiliensis DSM 5305] Length = 497 Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 52/151 (34%), Gaps = 28/151 (18%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 + DP+ D P Y +++ C +C +C V S++ Sbjct: 160 QSYDPLRDPEMRPSP-----YQ--AFVRITFGCDKFCTYC-----VVPMTRGPEQSRNPS 207 Query: 133 AALAYIQ--EKSQIWEVIFTGG--DPLILSHK----RLQKVLKTLRYIKHVQILRFHSRV 184 L + + E+ G + L+ RL +L L ++ ++ + + Sbjct: 208 EILKETKALADQGVQEITLLGQTVNSYRLTENGKEYRLADLLTMLHEVEGIKRI----KF 263 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 P+ + +L+Q +++ K H H Sbjct: 264 VTNYPKDMTNDLLQAVRDYKK----VSHYLH 290 >gi|210622529|ref|ZP_03293222.1| hypothetical protein CLOHIR_01170 [Clostridium hiranonis DSM 13275] gi|210154164|gb|EEA85170.1| hypothetical protein CLOHIR_01170 [Clostridium hiranonis DSM 13275] Length = 358 Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 43/125 (34%), Gaps = 17/125 (13%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIF 149 + + CP C FC ++++ G E L I + +++ F Sbjct: 5 KKRIIPIFVPHQGCPNDCIFCNQKKITGVCTTVTPEIVRDIIEECLPTIDKDAEVEIAFF 64 Query: 150 TGGDPLILSHKRLQKVLKTLRY------IKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G +Q+ L + I V+ +R +R P I E+++ +K Sbjct: 65 GGS--FTAIDMDIQRSLLAVAKEYKDRGI--VKDIRMSTR-----PDCITDEILEMVKSY 115 Query: 204 GKPVY 208 G + Sbjct: 116 GTTII 120 >gi|158520204|ref|YP_001528074.1| molybdenum cofactor biosynthesis protein A [Desulfococcus oleovorans Hxd3] gi|158509030|gb|ABW65997.1| molybdenum cofactor biosynthesis protein A [Desulfococcus oleovorans Hxd3] Length = 330 Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 23/163 (14%), Positives = 57/163 (34%), Gaps = 20/163 (12%) Query: 99 LKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C R + +LS ++ + +I I ++ TGG+P + Sbjct: 19 VSVTDRCNLNCLYCRRWDFSEYFPSSEILSYEEMLRLI-HIGAGLGITKIRITGGEPFVR 77 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI----- 211 + + + + + + + L++AG + + I++ Sbjct: 78 KDA--CSFIDRVAAFDGISDISVTTNGL------LLGRYLDRLRQAGIRRLNISLDSLKR 129 Query: 212 ---HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 + I +AG + V+++ +NDD Sbjct: 130 EKYRLITGRDVFHTVWDNIMAALDAGFDPVKVNVVVMREVNDD 172 >gi|146303294|ref|YP_001190610.1| radical SAM domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701544|gb|ABP94686.1| Radical SAM domain protein [Metallosphaera sedula DSM 5348] Length = 366 Score = 40.5 bits (94), Expect = 0.40, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 3/87 (3%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 D + + G+ RYP ++ + C + C C+ + LS+ A+ Sbjct: 10 DRKEEADRIRYAGLKDRYPSVLVFNVTRNCNLRCLHCYSGSGTQLFQDLPLST--WINAV 67 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRL 162 + ++ +GG+PL L Sbjct: 68 KQ-ASDMGVKHILLSGGEPLARRDLHL 93 >gi|229815885|ref|ZP_04446209.1| hypothetical protein COLINT_02941 [Collinsella intestinalis DSM 13280] gi|229808580|gb|EEP44358.1| hypothetical protein COLINT_02941 [Collinsella intestinalis DSM 13280] Length = 363 Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 39/85 (45%), Gaps = 4/85 (4%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C C +C + + G +L++++ + I + I V TGG+PL+ Sbjct: 18 ISVTDKCNFRCVYCMPEKGVPARAHGELLTAEEIARFVR-IVAQEGITRVRLTGGEPLVS 76 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182 R+ +++ +R I ++ + + Sbjct: 77 --HRIVPLIEEIRSISEIEDISLTT 99 >gi|187251699|ref|YP_001876181.1| MiaB family RNA modification enzyme [Elusimicrobium minutum Pei191] gi|186971859|gb|ACC98844.1| RNA modification enzyme, MiaB family [Elusimicrobium minutum Pei191] Length = 409 Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 54/160 (33%), Gaps = 13/160 (8%) Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +Q +P E +N + D++ + G R R +K+ C +C +C Sbjct: 88 KQNLPSAEIINKHNIAKTLFDTDDDFWAVSGNEGR--SRAFIKIQDGCDNFCSYCII-PF 144 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSH-KRLQKVLKTLRYIK 173 ++K + I E++ TG G+ L L +LK + I+ Sbjct: 145 ARNKKLSKPIPSTVNEIKELIS--KGFKEIVLTGINIGNYLCPQTGADLAVLLKEIFKIE 202 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 +RF S + L+ KE G H Sbjct: 203 GEYRIRFSSIELNT----VTDSLLAAAKEGGSKFCNYFHI 238 >gi|260461259|ref|ZP_05809507.1| nitrogenase cofactor biosynthesis protein NifB [Mesorhizobium opportunistum WSM2075] gi|319785436|ref|YP_004144912.1| nitrogenase cofactor biosynthesis protein NifB [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|259032796|gb|EEW34059.1| nitrogenase cofactor biosynthesis protein NifB [Mesorhizobium opportunistum WSM2075] gi|317171324|gb|ADV14862.1| nitrogenase cofactor biosynthesis protein NifB [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 493 Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 45/248 (18%), Positives = 87/248 (35%), Gaps = 43/248 (17%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H Y R+ + + C V C +C R+ G + + +A E Q Sbjct: 61 AHHYFARMHVAVAPACNVQCNYCNRKYDCSNESRPGVVSEKLTPDQAVRKVIAVANEVPQ 120 Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + + G GD ++ + + +R I +++ + P + EL Sbjct: 121 LSVLGIAGPGDA-CYDWEKTKATFERVVREIPDIKLC-ISTNGLA-LPDHV-AELADMNV 176 Query: 202 EA------------GKPVYIAIHANHPYEFSEEAIA--------AISRLANAGIILLSQS 241 + G +Y I +H EA ++ L+ GI+ S Sbjct: 177 DHVTITINMVDPEIGAKIYPWIFYDHRRYVGIEAARILHERQMLSLEMLSARGILTKINS 236 Query: 242 VLLKGINDDPEILANLMRTFVEL---RIKPYYLHHPDLAAGTSHFRLTIEEG---QKIVA 295 V++ G+ND + N + P D A GT ++ LT + G + + Sbjct: 237 VMIPGVNDQHLVEVNKQVKQRGAILHNVMPL---ISDPAHGT-YYGLTGQRGPNALE-MR 291 Query: 296 SLKEKISG 303 +L++++ G Sbjct: 292 ALQDRLQG 299 >gi|322417559|ref|YP_004196782.1| Radical SAM domain-containing protein [Geobacter sp. M18] gi|320123946|gb|ADW11506.1| Radical SAM domain protein [Geobacter sp. M18] Length = 357 Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 39/221 (17%), Positives = 76/221 (34%), Gaps = 42/221 (19%) Query: 94 PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 P I + C + C C E+ S+ ++++ + L I + S+ V+ +GG Sbjct: 7 PKWIAWETTQRCNLKCVHCRCSSELTSSEGD--FTTEEGKKLLKEIADFSKP-VVVLSGG 63 Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAG-KPVYI 209 +PL+ L + +L R+ + + E+ + +K+A K V + Sbjct: 64 EPLMRPDIFELAEYGTSL-----------GLRMCMATNGALVTDEVCEKMKKADIKMVSL 112 Query: 210 A-------IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 + +H N P F AA G L S K + +A + Sbjct: 113 SLDGSTADVHDNFRQCPGSFDGVMRAA-ELFKKHGQKFLVNSSFTK---RNQTDIAATFK 168 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 + +Y+ + G++I+ L K Sbjct: 169 VAKSIGATAWYMFM----------IVPTGRGEEIMNELISK 199 >gi|261417406|ref|YP_003251089.1| Radical SAM domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373862|gb|ACX76607.1| Radical SAM domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 330 Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 23/110 (20%), Positives = 44/110 (40%), Gaps = 16/110 (14%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C + C+ C++ G K L++ + + I + + +IF+GG+P+ Sbjct: 3 VSWMTTNKCNLTCKHCYQDA--GENKSAELTTDEALKLIDEIAK-AGFKIMIFSGGEPMT 59 Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204 + L + LR F + + I +L LKEAG Sbjct: 60 RPD------IVELVAHARERGLRPVFGTNGTL-----ITHDLAFMLKEAG 98 >gi|237795960|ref|YP_002863512.1| hypothetical protein CLJ_B2751 [Clostridium botulinum Ba4 str. 657] gi|229262403|gb|ACQ53436.1| conserved hypothetical protein [Clostridium botulinum Ba4 str. 657] Length = 454 Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 39/169 (23%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L + C C FCF ++ + T+ D ++ L+++Q + T Sbjct: 89 AILDVPQRCHNNCLFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FLTLT-----N 138 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215 + + + +++ I + + H+ +P+ R+ +L+ Sbjct: 139 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 172 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 F+ + +LA GI + Q VL G+N + E L ++ L Sbjct: 173 -NRFAGNIYERMKKLAQGGIKMNCQVVLCPGLN-NGEELKRTIKDLYAL 219 >gi|229099205|ref|ZP_04230137.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock3-29] gi|228684186|gb|EEL38132.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock3-29] Length = 339 Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 60/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLVKVFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIACLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177 >gi|206889422|ref|YP_002249076.1| deoxyribonuclease, TatD family [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741360|gb|ACI20417.1| deoxyribonuclease, TatD family [Thermodesulfovibrio yellowstonii DSM 11347] Length = 449 Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 8/104 (7%) Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE--MVGSQKGTVLSSKDTEAALAYIQE 140 P I ++ D + L + + C CRFC R V + E + I + Sbjct: 251 DLPKGEIAYKIRDTLYLNVTNRCTNVCRFCVRFHTDYVKGHNLRLEKEPSAEDLIQTIGD 310 Query: 141 KSQIWEVIFTG-GDPLILSHKRLQKVLKTLRYI-KHVQILRFHS 182 E++F G G+P + RL + + ++I + +R ++ Sbjct: 311 PKNYKEIVFCGYGEPFL----RLDLIKEVAKWIKEQGGRVRVNT 350 >gi|168182598|ref|ZP_02617262.1| conserved hypothetical protein [Clostridium botulinum Bf] gi|182674230|gb|EDT86191.1| conserved hypothetical protein [Clostridium botulinum Bf] Length = 444 Score = 40.5 bits (94), Expect = 0.41, Method: Composition-based stats. Identities = 29/169 (17%), Positives = 63/169 (37%), Gaps = 39/169 (23%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L + C C FCF ++ + T+ D ++ L+++Q + T Sbjct: 79 AILDVPQRCHNNCLFCFIDQLPKGMRKTLYFKDD-DSRLSFLQGN----FLTLT-----N 128 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAIHANH 215 + + + +++ I + + H+ +P+ R+ +L+ Sbjct: 129 MKDEDIDRIIN--YKISPIN-ISVHT----TNPELRV--KLLN----------------- 162 Query: 216 PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 F+ + +LA GI + Q VL G+N + E L ++ L Sbjct: 163 -NRFAGNIYERMKKLAQGGIKMNCQVVLCPGLN-NGEELKRTIKDLYAL 209 >gi|313888304|ref|ZP_07821975.1| ribosomal protein S12 methylthiotransferase RimO [Peptoniphilus harei ACS-146-V-Sch2b] gi|312845707|gb|EFR33097.1| ribosomal protein S12 methylthiotransferase RimO [Peptoniphilus harei ACS-146-V-Sch2b] Length = 438 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 18/138 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GG 152 +K+ C C +C + G + + +D + + Y+ K ++ G Sbjct: 147 VKISEGCNNNCSYCIIPSLRGKNRSRKI--EDIYSEVEYLVSKGAREIILIAQNTTDYGI 204 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211 D + S L ++ + I+ ++ +R V + P ELI+ K K V Y+ + Sbjct: 205 D--LYSKYSLANLINKISKIEDLKWIR----VLYLYPDHFTDELIEEFKNNDKLVNYVDM 258 Query: 212 HANHPYEFSEEAIAAISR 229 H S++ + ++R Sbjct: 259 PLQH---ISDDVLKRMNR 273 >gi|299144058|ref|ZP_07037138.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518543|gb|EFI42282.1| 2-methylthioadenine synthetase [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 438 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 21/114 (18%), Positives = 41/114 (35%), Gaps = 16/114 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GG 152 +K+ C C +C ++ G + + +D + Y+ ++ G Sbjct: 147 VKISEGCNNNCTYCIIPKLRGRNRSRKI--EDIYDEVKYLVNNGTREVILIAQNTTDYGI 204 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD-PQRINPELIQCLKEAGK 205 D +L+ ++K L IK ++ +R + P ELI K K Sbjct: 205 D--NYKEYKLKDLVKKLSEIKDLKWIR-----LMYLYPDNFTDELIDEFKNNDK 251 >gi|228952519|ref|ZP_04114596.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar kurstaki str. T03a001] gi|228807130|gb|EEM53672.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar kurstaki str. T03a001] Length = 337 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFNEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q + LK+AG K V I++ Sbjct: 77 PLLRKD--LPKLIARLTNLEGLKDIGLTTNGIHLAKQ------AKALKDAGLKRVNISLD 128 Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H N ++ + I AG+ + V+ KG+ND Sbjct: 129 AIEDHVFKKINGRNVSTKPVLKGIEAANAAGLEVKVNMVVKKGMNDS 175 >gi|229079338|ref|ZP_04211882.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock4-2] gi|228704006|gb|EEL56448.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock4-2] Length = 333 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 67/167 (40%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 14 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEECLLTFNEIERLARLFISM-GVNKIRLTGGE 72 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L K++ L ++ ++ + + + Q + LK+AG K V I++ Sbjct: 73 PLLRKD--LPKLIARLTNLEGLKDIGLTTNGIHLAKQ------AKALKDAGLKRVNISLD 124 Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H N ++ + I AG+ + V+ KG+ND Sbjct: 125 AIEDHVFKKINGRNVSTKPVLKGIEAANAAGLEVKVNMVVKKGMNDS 171 >gi|139439619|ref|ZP_01773032.1| Hypothetical protein COLAER_02059 [Collinsella aerofaciens ATCC 25986] gi|133774960|gb|EBA38780.1| Hypothetical protein COLAER_02059 [Collinsella aerofaciens ATCC 25986] Length = 449 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 21/146 (14%) Query: 97 ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSS-KDTEAA----LAYIQEKSQIWEV 147 +K+ C +C FC R +++S +D A + I + + IW Sbjct: 144 AYVKISDGCNRFCSFCMIPYIRGRYHSRNSESIISEVRDLVAGGVREIVLIGQDTGIWGT 203 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS---RVPIVDPQRINPELIQCLKEAG 204 F D S + L ++L+ + + +R H+ RV + P+ + ELI +++ Sbjct: 204 DFADEDVADGSPRNLAQLLRAVA-----EAVRPHNVWVRVLYLQPEGMTDELIDTIRDTP 258 Query: 205 KPV-YIAIHANHPYEFSEEAIAAISR 229 + + YI I H + A+ R Sbjct: 259 EVLPYIDIPVQH---CDARILKAMRR 281 >gi|323527295|ref|YP_004229448.1| RNA modification enzyme, MiaB family [Burkholderia sp. CCGE1001] gi|323384297|gb|ADX56388.1| RNA modification enzyme, MiaB family [Burkholderia sp. CCGE1001] Length = 461 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 46/138 (33%), Gaps = 26/138 (18%) Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143 H P R+ + ++ C YC +C V S+ + L I Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192 Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 + EV G + L L + +++ + I ++ +R+ + P+ Sbjct: 193 VREVTLLGQNVNAYRGALTLGSSEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248 Query: 195 ELIQCLKEAGKPVYIAIH 212 LI + K + +H Sbjct: 249 RLIDTYAKVPK-LVSHLH 265 >gi|74317041|ref|YP_314781.1| GTP cyclohydrolase subunit MoaA [Thiobacillus denitrificans ATCC 25259] gi|74056536|gb|AAZ96976.1| Elongator protein 3/MiaB/NifB [Thiobacillus denitrificans ATCC 25259] Length = 327 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 56/171 (32%), Gaps = 22/171 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFT 150 R+ D + L + C + C +C G ++ L + E L + V T Sbjct: 12 RHIDYVRLSVTDRCDLRCSYCMPEGFKGFEEPADWLDFDEIERLLGAFAR-LGVRRVRLT 70 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG------ 204 GG+PL+ + + + + + ++ L + LK AG Sbjct: 71 GGEPLLRRD--ISGLARRIASLPGIEDLSLSTNA------TQLDRHAAALKAAGVTRLNV 122 Query: 205 ----KPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGINDD 250 N + + + ++ AG + V ++G NDD Sbjct: 123 SLDSLQQARVERIN-GRDVLAKVMTGLAAAQEAGFAPIKLNMVAMRGSNDD 172 >gi|15644078|ref|NP_229127.1| astB/chuR-related protein [Thermotoga maritima MSB8] gi|4981884|gb|AAD36397.1|AE001787_2 astB/chuR-related protein [Thermotoga maritima MSB8] Length = 454 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 37/162 (22%), Positives = 63/162 (38%), Gaps = 25/162 (15%) Query: 62 PQKEELNILPEER--------EDPIGDNNHSPLKGIVHRYPDRIL---LKLLHVCPVYCR 110 P EL+ E+ +D + + +RY DR L + L H C C Sbjct: 44 PSSTELSKTEVEKLKRGMFLLDDNFDELEFLKFRFNTYRYSDRFLRYTIVLTHSCNFDCV 103 Query: 111 FCFRREMVGSQKGTVLSSK------DTEAALAYIQEKSQIWEVIFTGGDPLILSHK--RL 162 +C+++ + S + D E L Y +K + V F GG+PL+L L Sbjct: 104 YCYQKVLHISSGSYISEKVQSNFLLDVERKLEY--QKPNLLSVTFYGGEPLLLEETVVNL 161 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 LK L V+ F + + + +++ L++AG Sbjct: 162 SSKLKRLCEKYGVKYDSF----IVTNGYLLTEKMVDDLQKAG 199 >gi|282878779|ref|ZP_06287547.1| translation initiation factor IF-1 [Prevotella buccalis ATCC 35310] gi|282880979|ref|ZP_06289670.1| translation initiation factor IF-1 [Prevotella timonensis CRIS 5C-B1] gi|281299170|gb|EFA91571.1| translation initiation factor IF-1 [Prevotella buccalis ATCC 35310] gi|281305202|gb|EFA97271.1| translation initiation factor IF-1 [Prevotella timonensis CRIS 5C-B1] Length = 72 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ +E G +I+ ISG + YI LPG KV++ +++ K G Sbjct: 22 FRVELENGVEII----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70 >gi|225574860|ref|ZP_03783470.1| hypothetical protein RUMHYD_02938 [Blautia hydrogenotrophica DSM 10507] gi|225037934|gb|EEG48180.1| hypothetical protein RUMHYD_02938 [Blautia hydrogenotrophica DSM 10507] Length = 447 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 44/125 (35%), Gaps = 18/125 (14%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT----- 150 R +K+ C +C +C G + S + + + + EV+ T Sbjct: 151 RAYIKVQDGCNQFCTYCIIPYTRGRVRSR--SKDEVQKEVVRL-ANRGYHEVVLTGIHLS 207 Query: 151 --GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 G D L +++ + + + +R S ++P I E ++ L E K Sbjct: 208 SYGVD-FKEQPDSLLDLIRAIHQVDGITRIRLSS----LEPGVITEEFVKGLAELWK--- 259 Query: 209 IAIHA 213 + H Sbjct: 260 VCPHF 264 >gi|224372902|ref|YP_002607274.1| hypothetical protein NAMH_0871 [Nautilia profundicola AmH] gi|223589641|gb|ACM93377.1| conserved hypothetical protein [Nautilia profundicola AmH] Length = 408 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 20/123 (16%), Positives = 49/123 (39%), Gaps = 10/123 (8%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + +K+ C C +C + G L + + + I E + TG + Sbjct: 128 KAFVKIQEGCDFECAYCIIPSVRG--HSRSLPENIILEQIKTLSQN-GISEFVLTGINMG 184 Query: 156 IL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 ++ L ++++ + I+ V+ +R S ++P +++ LI+ + ++ I Sbjct: 185 SYGKDTNTTLSELIEKISKIRGVKRIRLGS----LEPSQLDERLIELTQNGILEKHLHIA 240 Query: 213 ANH 215 H Sbjct: 241 LQH 243 >gi|189463972|ref|ZP_03012757.1| hypothetical protein BACINT_00307 [Bacteroides intestinalis DSM 17393] gi|189438545|gb|EDV07530.1| hypothetical protein BACINT_00307 [Bacteroides intestinalis DSM 17393] Length = 439 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 13/134 (9%) Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 HS R LK+ C YC +C + + E A Sbjct: 137 HSFAPSCSRGDRTRYFLKVQDGCDYYCSYCTI-PFARGRSRNGTVASMVEQARQ--AAAE 193 Query: 143 QIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 E++ TG GD + + ++K L ++ ++ R S ++P + E+I+ Sbjct: 194 GGKEIVLTGVNIGDFGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEF 249 Query: 200 LKEAGKPVYIAIHA 213 + + H Sbjct: 250 VSHSR---SFMPHF 260 >gi|182678041|ref|YP_001832187.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Beijerinckia indica subsp. indica ATCC 9039] gi|229890430|sp|B2IIK5|MIAB_BEII9 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|182633924|gb|ACB94698.1| RNA modification enzyme, MiaB family [Beijerinckia indica subsp. indica ATCC 9039] Length = 510 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 18/100 (18%), Positives = 36/100 (36%), Gaps = 15/100 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG-- 152 + + C +C FC V +S+ EA LA ++ S + EV G Sbjct: 187 AFVTVQEGCDKFCSFC-----VVPYTRGAETSRPVEAILAEVETLIASGVREVTLIGQNV 241 Query: 153 ------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 D + + L ++ + + + +R+ + P Sbjct: 242 NAYHGFDAMTGAPASLASLMARVAAMPGLLRIRYTTSHPN 281 >gi|1361913|pir||S57481 molybdopterin biosynthesis protein moaA - Methanobacterium thermoautotrophicum (strain Marburg) (fragment) gi|871467|emb|CAA61207.1| moaA [Methanothermobacter thermautotrophicus] Length = 87 Score = 40.5 bits (94), Expect = 0.42, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 6/83 (7%) Query: 91 HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 HR P L + + C V C +C R ++ S + +S +D E + + ++ Sbjct: 7 HRRPLVSLRISVTGRCNVSCIYCHRDGILRSDEE--MSPEDIENICR-VASDLGVKKIRL 63 Query: 150 TGGDPLILSHKRLQKVLKTLRYI 172 +GG+PLI + ++++ + I Sbjct: 64 SGGEPLIRDD--IVEIVEKINSI 84 >gi|237808516|ref|YP_002892956.1| molybdenum cofactor biosynthesis protein A [Tolumonas auensis DSM 9187] gi|259495873|sp|C4LFK3|MOAA_TOLAT RecName: Full=Molybdenum cofactor biosynthesis protein A gi|237500777|gb|ACQ93370.1| molybdenum cofactor biosynthesis protein A [Tolumonas auensis DSM 9187] Length = 336 Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 28/179 (15%), Positives = 64/179 (35%), Gaps = 22/179 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C +C + + L+ + + Y + + ++ TGG+P + Sbjct: 27 LSVTEACNFRCTYCLPDGYRPDGRKSFLTVDEIRRVV-YGFAELGVKKIRLTGGEPSMRR 85 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 L +++T+ ++ + + R+ Q + + ++I + P + Sbjct: 86 D--LPAIIETVANTAGIEKV-----AMTTNGYRLKDRAQQWFDAGLRSLNVSIDSLDPRQ 138 Query: 219 ---FSEEAI-----AAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + E + AG + +VLLK +ND L + L+ +P Sbjct: 139 FQLITGENKLVEILEGLEAAQKAGFRKIKVNTVLLKNLNDH-----ELSQFLFWLKKQP 192 >gi|251798763|ref|YP_003013494.1| radical SAM protein [Paenibacillus sp. JDR-2] gi|247546389|gb|ACT03408.1| Radical SAM domain protein [Paenibacillus sp. JDR-2] Length = 379 Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 9/88 (10%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159 ++C VYCRFC GS +G VLS+ E L IQE + E++ GG + Sbjct: 62 TNICDVYCRFCAFYRAPGSNEGYVLSN---ETILNKIQETIDVGGTEILMQGG---TNPN 115 Query: 160 KRLQKVLKTLRYIK-HVQILRFHSRVPI 186 LR IK H + HS P Sbjct: 116 LPFSYYTDLLREIKQHFPDITMHSFSPA 143 >gi|332981525|ref|YP_004462966.1| 30S ribosomal protein S12P methylthiotransferase [Mahella australiensis 50-1 BON] gi|332699203|gb|AEE96144.1| SSU ribosomal protein S12P methylthiotransferase [Mahella australiensis 50-1 BON] Length = 440 Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 53/147 (36%), Gaps = 27/147 (18%) Query: 80 DNNHSPLKGIVHRY----PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 + ++GI R P +K+ C C +C + G + + E + Sbjct: 127 EGGDVSVEGIEKRILSTPPYMAYVKIAEGCDNGCSYCIIPFLRGPYRSRPM-----ENII 181 Query: 136 AYIQE--KSQIWEVIFTGGD-PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVD 188 +E + E+I D + RL ++L L I +++ +R V Sbjct: 182 EECKELVDRGVKEIILIAQDTSVYGRDIYGKPRLAELLHELDNINNIEWIR----VLYCY 237 Query: 189 PQRINPELIQCLKEAGKPVYIAIHANH 215 P +N ELI+ + ++ H H Sbjct: 238 PDYVNDELIEAIVQSR-------HVCH 257 >gi|299143546|ref|ZP_07036626.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 386 str. F0131] gi|298518031|gb|EFI41770.1| radical SAM domain protein [Peptoniphilus sp. oral taxon 386 str. F0131] Length = 288 Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 34/85 (40%), Gaps = 6/85 (7%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDP 154 ++++ C C FC+ M + + D A L I++ Q V GD Sbjct: 17 LIIQATIGCSHNDCTFCY---MYKDEPFIIRKIDDIIAELETIRDYFPQFERVFIADGDA 73 Query: 155 LILSHKRLQKVLKTLRY-IKHVQIL 178 L+L L ++L+ + +V + Sbjct: 74 LVLKTTDLLRLLEYINKNFPNVNRI 98 >gi|167753010|ref|ZP_02425137.1| hypothetical protein ALIPUT_01274 [Alistipes putredinis DSM 17216] gi|167659324|gb|EDS03454.1| hypothetical protein ALIPUT_01274 [Alistipes putredinis DSM 17216] Length = 432 Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 46/198 (23%), Positives = 72/198 (36%), Gaps = 35/198 (17%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD--- 153 LK+ C C +C ++ +V E A + E+I D Sbjct: 136 AYLKISEGCNWKCGYCAI-PLIRGPHASVPMETLLEEARK--LAAGGVRELIVIAQDTTY 192 Query: 154 -PLIL-SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210 L L +RL ++L+ L I ++ +R H P P E+I+ + K Y+ Sbjct: 193 YGLDLYGKRRLAELLEALCRIDGIRWIRLHYAYPTAFP----DEVIEVMAREPKICKYLD 248 Query: 211 IHANHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKG----INDDPEI 253 I H S++ +AA+ R L A L ++ LL G D E Sbjct: 249 IPFQH---ISDDQLAAMHRRHTKAQAYELIDKLRQAIPDLALRTTLLVGYPGETEADFEE 305 Query: 254 LANLMR--TFVELRIKPY 269 L +R F L + PY Sbjct: 306 LLEFVRTVRFERLGVFPY 323 >gi|86742221|ref|YP_482621.1| hypothetical protein Francci3_3540 [Frankia sp. CcI3] gi|123737129|sp|Q2J750|RIMO_FRASC RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|86569083|gb|ABD12892.1| SSU ribosomal protein S12P methylthiotransferase [Frankia sp. CcI3] Length = 523 Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 30/144 (20%), Positives = 50/144 (34%), Gaps = 16/144 (11%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 +LK+ C C FC FR V VL+ + A + G Sbjct: 184 AVLKISSGCDRRCAFCAIPSFRGSHVSRSPDDVLAEAEWLAGQGARELVLVSENSTSYGK 243 Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ-CLKEAGKPVYIA 210 D L + L+K+L L + + +R + P + P L++ L G Y+ Sbjct: 244 D---LGDLRALEKLLPQLAAVSGIVRVR----TVYLQPAEMRPSLLEVLLTTPGLAPYLD 296 Query: 211 IHANHPYEFSEEAIAAISRLANAG 234 + H S + + R +G Sbjct: 297 LSFQHA---SPPVLRRMRRFGGSG 317 >gi|15804047|ref|NP_290083.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 EDL933] gi|15833637|ref|NP_312410.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. Sakai] gi|168746962|ref|ZP_02771984.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4113] gi|168753312|ref|ZP_02778319.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4401] gi|168759583|ref|ZP_02784590.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4501] gi|168765907|ref|ZP_02790914.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4486] gi|168772547|ref|ZP_02797554.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4196] gi|168779643|ref|ZP_02804650.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4076] gi|168785365|ref|ZP_02810372.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC869] gi|168797330|ref|ZP_02822337.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC508] gi|195935030|ref|ZP_03080412.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4024] gi|208808940|ref|ZP_03251277.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4206] gi|208814241|ref|ZP_03255570.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4045] gi|208818610|ref|ZP_03258930.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4042] gi|209395960|ref|YP_002272979.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4115] gi|217326043|ref|ZP_03442127.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. TW14588] gi|254795455|ref|YP_003080292.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. TW14359] gi|261224817|ref|ZP_05939098.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. FRIK2000] gi|261254287|ref|ZP_05946820.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. FRIK966] gi|291284875|ref|YP_003501693.1| putative coproporphyrinogen III oxidase [Escherichia coli O55:H7 str. CB9615] gi|12518212|gb|AAG58644.1|AE005576_3 putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EDL933] gi|13363857|dbj|BAB37806.1| putative coproporphyrinogen oxidase [Escherichia coli O157:H7 str. Sakai] gi|187771599|gb|EDU35443.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4196] gi|188018368|gb|EDU56490.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4113] gi|189002627|gb|EDU71613.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4076] gi|189359172|gb|EDU77591.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4401] gi|189364804|gb|EDU83223.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4486] gi|189369751|gb|EDU88167.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4501] gi|189374481|gb|EDU92897.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC869] gi|189379883|gb|EDU98299.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC508] gi|208728741|gb|EDZ78342.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4206] gi|208735518|gb|EDZ84205.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4045] gi|208738733|gb|EDZ86415.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4042] gi|209157360|gb|ACI34793.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC4115] gi|217322264|gb|EEC30688.1| putative coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. TW14588] gi|254594855|gb|ACT74216.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. TW14359] gi|290764748|gb|ADD58709.1| Putative coproporphyrinogen III oxidase [Escherichia coli O55:H7 str. CB9615] gi|320639818|gb|EFX09412.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. G5101] gi|320645318|gb|EFX14334.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str. 493-89] gi|320650629|gb|EFX19095.1| coproporphyrinogen III oxidase [Escherichia coli O157:H- str. H 2687] gi|320655823|gb|EFX23746.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str. 3256-97 TW 07815] gi|320661605|gb|EFX29020.1| coproporphyrinogen III oxidase [Escherichia coli O55:H7 str. USDA 5905] gi|320666628|gb|EFX33611.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. LSU-61] gi|326337500|gb|EGD61335.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1044] Length = 445 Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 24/168 (14%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGD---NNHSPLKGIVHRYP 94 LTP A ++ P D R +P + + + E+ + SP Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTASP--------R 56 Query: 95 DRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIF 149 R++ + C +C FC F + + ++ E A + + + + I V F Sbjct: 57 KRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYF 116 Query: 150 TGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 GG P LS L +++ TLR + + RV D +RI+ Sbjct: 117 GGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|116625479|ref|YP_827635.1| GTP cyclohydrolase subunit MoaA [Candidatus Solibacter usitatus Ellin6076] gi|116228641|gb|ABJ87350.1| GTP cyclohydrolase subunit MoaA [Candidatus Solibacter usitatus Ellin6076] Length = 331 Score = 40.5 bits (94), Expect = 0.43, Method: Composition-based stats. Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 4/98 (4%) Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQE 140 N +PL HR D + + + C + C +C V ++ +L ++ E + + Sbjct: 2 NATPLVDSFHRVHDNLRISVTDRCNIRCFYCMPETGVTFVERREILDFEEIERFVR-VAA 60 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 I ++ TGG+PL+ L ++ L I +Q L Sbjct: 61 GLGIRKLRVTGGEPLLRRD--LPVLIGRLACIPGIQDL 96 >gi|17988440|ref|NP_541073.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. 16M] gi|17984225|gb|AAL53337.1| oxygen-independent coproporphyrinogen iii oxidase [Brucella melitensis bv. 1 str. 16M] Length = 474 Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145 D L + C C +C T ++ KD + L Y+ +I Sbjct: 70 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 120 Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194 E+ F GG P I+ L ++ LR R + +DP+R+ P Sbjct: 121 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 173 Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 E+ L +G + + F + AI+R+ A L Sbjct: 174 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 212 >gi|332884205|gb|EGK04473.1| ribosomal protein S12 methylthiotransferase rimO [Dysgonomonas mossii DSM 22836] Length = 431 Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 14/112 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFT 150 LK+ C C +C M G + + ++ E + + + ++ F Sbjct: 138 AYLKISEGCNRTCSYCSIPIMTGKHQSRPI--EEIEEEVRNLVAVGVKEFQVIAQDLSFY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 G D +L ++++ + I+ V+ +R H P P +L++ ++E Sbjct: 196 GYD--NYKQAKLPELIERIAKIEGVKWIRLHYAYPANFPY----DLLRVMRE 241 >gi|169831502|ref|YP_001717484.1| radical SAM domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169638346|gb|ACA59852.1| Radical SAM domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 334 Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 44/291 (15%), Positives = 91/291 (31%), Gaps = 78/291 (26%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + ++C + C C+R G + LS+ + +A + I + +IF+GG+PL+ Sbjct: 3 VSWNTTNMCNLACAHCYRDA--GQKAEDELSTAEGKALIDEIAG-AGFKIMIFSGGEPLM 59 Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213 + ++ + LR S + I PE+ L +AG + + I++ Sbjct: 60 RPD--IYDLIAYAAS----RGLRPVLGSNGTL-----ITPEVAGRLVQAGARAIGISL-- 106 Query: 214 NHPYEFSE--------------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 A+ + AG+ + ++ ++ E L +L Sbjct: 107 ---DSVDPGAHDGFRAEKGSWQAAVEGMKNCRAAGLPFQVHTTVMDWNEEEVEGLTDLAV 163 Query: 260 TFVELRIKPYYLHHPDLAAGTSH---FRLTIEEGQKI---------VASLKEK------I 301 G +H F + I L + Sbjct: 164 EL----------------GGIAHHVFFLVPTGRALAIEHTTLRARQYEQLLRRLLKKQQT 207 Query: 302 SGL-----CQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNIVHDY 347 +GL C P +I K + + + +YC+ + + Sbjct: 208 AGLEVKPTCAPQFIRVADQLGAKTRFTRGCLAGI---AYCLVNPVGDLQAC 255 >gi|83589452|ref|YP_429461.1| MiaB-like tRNA modifying enzyme [Moorella thermoacetica ATCC 39073] gi|83572366|gb|ABC18918.1| MiaB-like tRNA modifying enzyme [Moorella thermoacetica ATCC 39073] Length = 450 Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 27/122 (22%), Positives = 41/122 (33%), Gaps = 13/122 (10%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 R LK+ C +C +C G + L + + Y++ G Sbjct: 145 RAFLKIQEGCQEFCTYCIVPYARGPLRSRDPELIRAEVRRLVDAGYLEIVLTGVHTGAYG 204 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 D + L +LK L + ++ LR S +DP PEL L G I Sbjct: 205 RD--LAGDIDLAGLLKNLVQVPGLRRLRISS----IDPLDFTPELKAVLTGEG---IICP 255 Query: 212 HA 213 H Sbjct: 256 HF 257 >gi|326388685|ref|ZP_08210278.1| radical SAM domain-containing protein [Novosphingobium nitrogenifigens DSM 19370] gi|326206936|gb|EGD57760.1| radical SAM domain-containing protein [Novosphingobium nitrogenifigens DSM 19370] Length = 424 Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 33/175 (18%), Positives = 60/175 (34%), Gaps = 39/175 (22%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155 ++++ C + C CF + G + E L + + + + V +GG+P Sbjct: 54 AIIEVTEACDLACPVCF--ADAADRNGRHRPLAEIETMLDVLVESEGEPDLVQISGGEP- 110 Query: 156 ILSHKRLQKVLKTL--RYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 L + +L + R I+HV I +R +P + L + I Sbjct: 111 TLHPEFFA-ILDAVKRRPIRHVMINTNGVRLAQ----------DPTFVARLATYRPALEI 159 Query: 210 AIHANHPY----------EFSEEAIAAISRLANAGIILLSQSVLL----KGINDD 250 + + S A+ L AGI + L+ G+NDD Sbjct: 160 YLQFDSLRDEALMDLRGARLSRIRKEALEALEQAGIS----TTLVVAVKHGVNDD 210 >gi|296132944|ref|YP_003640191.1| MiaB-like tRNA modifying enzyme YliG [Thermincola sp. JR] gi|296031522|gb|ADG82290.1| MiaB-like tRNA modifying enzyme YliG [Thermincola potens JR] Length = 439 Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 53/144 (36%), Gaps = 21/144 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFTG 151 P +K+ C C +C + G + G K+ + ++ + EVI Sbjct: 144 PYTAYVKIAEGCDNRCSYC---AIPGIRGGYRSRPKESILQEVNDLVRR--GVKEVILIA 198 Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L ++++ + + V +R P RI +LIQ ++ K Sbjct: 199 QDTTRYGTDIYGRYALAELIQEIASLP-VHWIRI----LYAYPTRITDDLIQIIRGEPKV 253 Query: 207 V-YIAIHANHPYEFSEEAIAAISR 229 Y+ + H ++ I A++R Sbjct: 254 CKYLDMPIQH---VDKDIIKAMNR 274 >gi|91784732|ref|YP_559938.1| molybdenum cofactor biosynthesis protein A [Burkholderia xenovorans LB400] gi|91688686|gb|ABE31886.1| GTP cyclohydrolase subunit MoaA [Burkholderia xenovorans LB400] Length = 369 Score = 40.5 bits (94), Expect = 0.44, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 31/79 (39%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C R + +LS ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRAVFDKDYTFLPHSALLSFEEIERLARIFVAH-GVEKIRLTGGE 99 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K L+ ++ L + Sbjct: 100 PLL--RKNLEFLIDRLARL 116 >gi|315181901|gb|ADT88814.1| radical SAM domain protein [Vibrio furnissii NCTC 11218] Length = 294 Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 27/79 (34%), Gaps = 5/79 (6%) Query: 95 DRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTE-AALAYIQEKSQIWEVIFTGG 152 + ILL++ C CRFC + K E + + GG Sbjct: 15 NSILLEVTVGCTHNSCRFCT---FYYDTPYRIAPKKQVEHDLQEAQRVNPNAKRIYAVGG 71 Query: 153 DPLILSHKRLQKVLKTLRY 171 DP L +L + + +R Sbjct: 72 DPFTLRTAKLVDLARMIRR 90 >gi|294101544|ref|YP_003553402.1| Radical SAM domain protein [Aminobacterium colombiense DSM 12261] gi|293616524|gb|ADE56678.1| Radical SAM domain protein [Aminobacterium colombiense DSM 12261] Length = 315 Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 14/118 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R + + CP C +C +R + G + S + L+ + E ++ F G Sbjct: 2 KRRAVFLPMRNCPHRCIYCDQRAITGEYQP--PSPHEVVTMLSTLLEPVEL--CYFGGS- 56 Query: 154 PLILSHKRL-QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 +RL ++ L + +RF + I+ + ++ LK+ P+ + Sbjct: 57 -FTCQPERLQEEYLAAIVAAPSGSSVRFSTHPLC-----ISRDTVERLKKF--PISMV 106 >gi|169350747|ref|ZP_02867685.1| hypothetical protein CLOSPI_01520 [Clostridium spiroforme DSM 1552] gi|169292610|gb|EDS74743.1| hypothetical protein CLOSPI_01520 [Clostridium spiroforme DSM 1552] Length = 461 Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 9/118 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C +CF + + ++S + + AL ++ E S EV F GG+PL Sbjct: 104 LHVAHTCNLNCSYCFASQGKYKGERALMSFEVGKQALDFLVENSGTRHNLEVDFFGGEPL 163 Query: 156 ILSHKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 ++ + ++ ++ R I+ + RF + I+ E+I+ V +++ Sbjct: 164 -MNFQVVKDLVAYARSIEKEKNKNFRF---TLTTNGMLIDDEVIEFANRECSNVVLSL 217 >gi|152983231|ref|YP_001352703.1| hypothetical protein mma_1013 [Janthinobacterium sp. Marseille] gi|151283308|gb|ABR91718.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille] Length = 480 Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 31/132 (23%), Positives = 53/132 (40%), Gaps = 16/132 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGG 152 P ++ C C++C + + G + +D +AA I E S V F GG Sbjct: 89 PSLHIIVPTLQCAHSCKYCQVSRSLNDE-GHTIKIEDLDAACESIFESSSPTLTVEFQGG 147 Query: 153 DPLILSHKRLQKVLKTLRYIKHV-----QILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 DPL+ R V + + YI + + +R+ V ++N E+ KE V Sbjct: 148 DPLL----RFDLVRRAILYITSLNKSQNRRIRY---VVASTLHQLNVEMCLFFKE--HKV 198 Query: 208 YIAIHANHPYEF 219 Y++ + P Sbjct: 199 YLSTSIDGPSRL 210 >gi|148508185|gb|ABQ75975.1| molybdopterin-based tungsten cofactor biosynthesis protein [uncultured haloarchaeon] Length = 572 Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 ++++ C + C FCF GT S + E L I + + F+GG+P Sbjct: 175 AVIEVTSDCNLSCSFCFAS---SGPGGTHRSFETVEKLLQTIVKSGGPRPIQFSGGEP-T 230 Query: 157 LSHKRLQKVLKTLRYI--KHVQI 177 + L ++++ + +H+QI Sbjct: 231 VRDD-LPEIVERAGQMGFEHIQI 252 >gi|119871554|ref|YP_929561.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119672962|gb|ABL87218.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184] Length = 216 Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFTGGDPL 155 + L CP+ CR+C + G + +++ + A AY Q+ V+ TGG+PL Sbjct: 23 AVFIRLAGCPIRCRYCDTKYSWDPLGGVEIDAEEVVQRAAAY----GQLGHVVITGGEPL 78 Query: 156 ILSHKRLQKVLKTLRYIKHVQI 177 I + L ++ LR + V++ Sbjct: 79 I--WRNLHELACPLRRLGTVEV 98 >gi|110667956|ref|YP_657767.1| molybdopterin-based tungsten cofactor biosynthesis protein [Haloquadratum walsbyi DSM 16790] gi|109625703|emb|CAJ52135.1| molybdopterin-based tungsten cofactor biosynthesis protein [Haloquadratum walsbyi DSM 16790] Length = 572 Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 7/83 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 ++++ C + C FCF GT S + E L I + + F+GG+P Sbjct: 175 AVIEVTSDCNLSCSFCFAS---SGPGGTHRSFETVEKLLQTIVKSGGPRPIQFSGGEP-T 230 Query: 157 LSHKRLQKVLKTLRYI--KHVQI 177 + L ++++ + +H+QI Sbjct: 231 IRDD-LPEIVERAGQMGFEHIQI 252 >gi|322420567|ref|YP_004199790.1| Radical SAM domain-containing protein [Geobacter sp. M18] gi|320126954|gb|ADW14514.1| Radical SAM domain protein [Geobacter sp. M18] Length = 294 Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 12/82 (14%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEVIFT 150 ++ ++ C CRFC G K + + LA I+ + + V Sbjct: 19 LIFQITIGCSQNRCRFC------GMYKMKHFRIRSLDQVLAEIRSVPPRYRPCVRRVFLA 72 Query: 151 GGDPLILSHKRLQKVLKTLRYI 172 GD LI + L ++L L + Sbjct: 73 DGDALIYPQEGLGRILDELSDV 94 >gi|331004679|ref|ZP_08328140.1| hypothetical protein HMPREF0491_03002 [Lachnospiraceae oral taxon 107 str. F0167] gi|330409504|gb|EGG88946.1| hypothetical protein HMPREF0491_03002 [Lachnospiraceae oral taxon 107 str. F0167] Length = 449 Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 24/162 (14%), Positives = 65/162 (40%), Gaps = 19/162 (11%) Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYP------------DRILLKLLHVCPVYCRF 111 +E + +D + + +S + +Y +R+++ L + C + C + Sbjct: 41 AKEDIKKQFDIDDNMYEKYYSNIFNSYSKYTVINVEKSAEKNLNRLVIHLTNDCNMRCGY 100 Query: 112 CFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 C+ + +++ + + + E I + F GG+PL ++++ ++ K + Sbjct: 101 CYANGGAYYSQRSIMDKAVLDKLVDRFFGEFHIINNIQFFGGEPL-MNYELMEYACKIVS 159 Query: 171 YIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 I + + F + + I+ + I +K+ V I+ Sbjct: 160 SIAKKRNYNITFG---LVTNGTLIDCKFIDLVKKFNIQVTIS 198 >gi|288947682|ref|YP_003445065.1| Radical SAM domain protein [Allochromatium vinosum DSM 180] gi|288898198|gb|ADC64033.1| Radical SAM domain protein [Allochromatium vinosum DSM 180] Length = 581 Score = 40.5 bits (94), Expect = 0.45, Method: Composition-based stats. Identities = 43/210 (20%), Positives = 73/210 (34%), Gaps = 46/210 (21%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFR------REMVGSQKGTVLSSKDTEAALAYIQ 139 +K + HR + + C C FC RE +++ + D AL Y Sbjct: 72 IKSLPHR--RSVRFSITEKCNYRCFFCHEEGLDMDRERQKTEEAALFKVFDQLKALDY-- 127 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI---KHVQILRFHSRVPIVDPQRINPEL 196 ++ FTGG+PL L +++ + L+ ++ I V+ + RV N Sbjct: 128 -----DDLTFTGGEPL-LKWRQILRALEYMQAIGYRPDVKFVSNG-RVL-------NDTF 173 Query: 197 IQCLKEA--GKPVYIAIH---------ANHPYEFS--------EEAIAAISRLANAGIIL 237 I+ LK I++H HP ++RL A I Sbjct: 174 IEGLKRYPGRVRFNISMHSLDSACYDRIVHPLSSHTPGTRDDLAHVQHNLARLNAAEIPF 233 Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIK 267 VLL G+N E + + + + Sbjct: 234 KLNFVLLNGLNTSAEQIDRIFAYALACGAR 263 >gi|240169459|ref|ZP_04748118.1| Fe-S oxidoreductase [Mycobacterium kansasii ATCC 12478] Length = 491 Score = 40.1 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 17/107 (15%), Positives = 40/107 (37%), Gaps = 13/107 (12%) Query: 94 PDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 P+ +LLKL C + C +C+ + L + + ++ + F Sbjct: 106 PNALLLKLTGGCNIACTYCYDYDKTRF-----RARLDDDRIHELVDVLIARNSHLSIAFH 160 Query: 151 GGDPLILSHKRLQKVL----KTLRYIKHVQILRFHSRVPIVDPQRIN 193 GG+PL L ++++ + + + H+ + P ++ Sbjct: 161 GGEPL-LRWDQIKRTVSYARERAAAVGHLVSFSIQTNGLFFTPAVVD 206 >gi|16950513|dbj|BAB72009.1| quinohemoprotein amine dehydrogenase unknown subunit. [Pseudomonas putida] Length = 476 Score = 40.1 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 27/187 (14%), Positives = 67/187 (35%), Gaps = 26/187 (13%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTG 151 + ++L + C + C +C++ ++ G +S+ EA++ + + Q + V+F G Sbjct: 102 NTVVLNVNTGCNLSCTYCYKEDLDKPSAGKKMSTATAEASVEMLLKESPDEQRYSVVFFG 161 Query: 152 GDPLILSH--KRLQKVLKT--LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 G+PL + + + K V+ + + + E++ L + Sbjct: 162 GEPLSNRPLIEHMVAYCERRFAEAGKQVEFI------MTTNATLLTEEIVDWLNAHRFGL 215 Query: 208 YIAI----HANHPYEFS-------EEAIAAISRL--ANAGIILLSQSVLLKGINDDPEIL 254 ++I + + + + L + ++ L +GI D I Sbjct: 216 SVSIDGPKTVHDRNRITVGGQGTYDVVRRKVDMLLSRYHSRPVGARVTLTRGITDVETIW 275 Query: 255 ANLMRTF 261 +L Sbjct: 276 NHLFNEL 282 >gi|218781894|ref|YP_002433212.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01] gi|218763278|gb|ACL05744.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01] Length = 340 Score = 40.1 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 67/163 (41%), Gaps = 18/163 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C++C+R G V+ + + A+ + + + TGG+PL L+ Sbjct: 11 LSVTGKCNLACKYCYR----GEPNNDVMKPEWAKTAIDLAAASGEGFHIQITGGEPL-LA 65 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA----IHA- 213 + K+L+ ++ K VQ S + I+ + + L + ++ IH Sbjct: 66 WDMILKLLEYIQKSK-VQ----ASVGLQTNGTLIDDNIARALLAHKVQLGVSLDGPIHIH 120 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILAN 256 N +E+ + ++ L + + + +V+ D+ L Sbjct: 121 NKLRGKAEQTLNNLALLTDRNVPFRTTTVVTA---DNAASLGK 160 >gi|89095299|ref|ZP_01168218.1| radical SAM domain protein [Oceanospirillum sp. MED92] gi|89080418|gb|EAR59671.1| radical SAM domain protein [Oceanospirillum sp. MED92] Length = 299 Score = 40.1 bits (93), Expect = 0.46, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 12/122 (9%) Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGG 152 + ++L++ + C C FC + +K ++ EA + + + V G Sbjct: 21 NSLILQVTNGCSWNKCTFC-EMYTLPQKKFRPKPQQEIEAEIKACAAQLGAVRRVFLADG 79 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV-DPQRINP---ELIQCLKEAGKPVY 208 D + LS KRL+++L ++ H+ + +RV P+ +N E + L+E G + Sbjct: 80 DAMALSFKRLKEILLAIKT--HLPTV---TRVSSYCLPRNLNNKSVEELAELRELGLQLM 134 Query: 209 IA 210 Sbjct: 135 YV 136 >gi|299067006|emb|CBJ38201.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum CMR15] Length = 373 Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 7/77 (9%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F ++ Q +LS ++ E + E + ++ TGG+ Sbjct: 48 ISVTDRCNFRCIYCMPKDVFDKDYRFLQHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 106 Query: 154 PLILSH-KRLQKVLKTL 169 PL+ +RL ++L L Sbjct: 107 PLLRKDIERLVEMLARL 123 >gi|260564161|ref|ZP_05834646.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella melitensis bv. 1 str. 16M] gi|260151804|gb|EEW86897.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella melitensis bv. 1 str. 16M] Length = 450 Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145 D L + C C +C T ++ KD + L Y+ +I Sbjct: 46 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 96 Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194 E+ F GG P I+ L ++ LR R + +DP+R+ P Sbjct: 97 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 149 Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 E+ L +G + + F + AI+R+ A L Sbjct: 150 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 188 >gi|257062972|ref|YP_003142644.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] gi|256790625|gb|ACV21295.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] Length = 293 Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 99 LKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTGGDPL 155 L++ C C+FC + V ++ EA L + + G D Sbjct: 19 LQITSGCSHNRCKFCT---FYKDARFAVSPWEEIEADLDELAASPWRYYDRIWLQGADSF 75 Query: 156 ILSHKRLQKVLKTL-RYIKHVQIL 178 +L + RL +V +T+ + V+ + Sbjct: 76 VLPYDRLMRVAETIYEKLPWVKSI 99 >gi|182417560|ref|ZP_02626322.2| conserved hypothetical protein [Clostridium butyricum 5521] gi|237667762|ref|ZP_04527746.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] gi|182378573|gb|EDT76101.1| conserved hypothetical protein [Clostridium butyricum 5521] gi|237656110|gb|EEP53666.1| conserved hypothetical protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 464 Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 12/116 (10%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTG 151 +++ C +C +C R + + +L + E A I+E I + G Sbjct: 167 AYIRIAEGCNNFCTYCIIPKIRGKFRSRKMENILKEAE-ELASQGIKELILIAQDTTMYG 225 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 D I K L ++L L I+ ++ +R V P+ I ELI + + K V Sbjct: 226 SD--IYGKKNLHELLNELSKIEGIEWIR----VLYCYPEEIYDELIDEMAQNNKVV 275 >gi|17545758|ref|NP_519160.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum GMI1000] gi|17428052|emb|CAD14741.1| probable molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum GMI1000] Length = 373 Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 35/77 (45%), Gaps = 7/77 (9%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F ++ Q +LS ++ E + E + ++ TGG+ Sbjct: 48 ISVTDRCNFRCIYCMPKDVFDKDYRFLQHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 106 Query: 154 PLILSH-KRLQKVLKTL 169 PL+ +RL ++L L Sbjct: 107 PLLRKDIERLVEMLARL 123 >gi|86150486|ref|ZP_01068711.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni CF93-6] gi|85839081|gb|EAQ56345.1| MiaB-like tRNA modifying enzyme [Campylobacter jejuni subsp. jejuni CF93-6] Length = 256 Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 51/129 (39%), Gaps = 18/129 (13%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +K+ C C +C R + + +L + A Y E++ Sbjct: 132 HTKAFVKIQEGCDFACSYCIIPSVRGKSRSVDEKALLKQVEILGANGY-------SEIVL 184 Query: 150 TGGD--PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG + L + L K+L+ + I ++ +R S ++P +++ ++ L EA Sbjct: 185 TGTNIGSYGLKNGTTLGKLLQKMGQILGIKRIRLGS----LEPAQLDESFLEILDEAWLE 240 Query: 207 VYIAIHANH 215 ++ I H Sbjct: 241 RHLHIALQH 249 >gi|126172736|ref|YP_001048885.1| radical SAM domain-containing protein [Shewanella baltica OS155] gi|125995941|gb|ABN60016.1| Radical SAM domain protein [Shewanella baltica OS155] Length = 295 Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 32/162 (19%), Positives = 64/162 (39%), Gaps = 25/162 (15%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 ++L++ + C CRFC K + LA + + + V GD + Sbjct: 19 LILQVTNGCSWNQCRFCDMYTQPQKAFRAQKLDKVEQDILAVARSGAPVSRVFLADGDAM 78 Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKPVYIA 210 L RL+ + K + R++ V +R+ P+ + PE + L+E G + Sbjct: 79 SLPFARLEAICKLINRHLPQV------TRISSYCLPRNLNNKTPEQLARLRELGLSLLYV 132 Query: 211 IHANHPYEF---------SEEAIAAISRLANAG----IILLS 239 + E E ++AA+ ++ AG +++L+ Sbjct: 133 GCESGDDEVLAKIQKGETFESSLAALLKIRAAGMKSSVMILN 174 >gi|256811140|ref|YP_003128509.1| Radical SAM domain protein [Methanocaldococcus fervens AG86] gi|256794340|gb|ACV25009.1| Radical SAM domain protein [Methanocaldococcus fervens AG86] Length = 280 Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 8/76 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 +Y ++LK+ + C + C +C+ V ++ + K + A+ Y+ ++ FTG Sbjct: 2 KY---LILKITNRCNLNCIYCY----VNNKDNKDMDFKTAKNAIDYLLSLDNKIKIQFTG 54 Query: 152 GDPLILSHKRLQKVLK 167 G+PL L+ K ++KV+ Sbjct: 55 GEPL-LNFKLIEKVVD 69 >gi|219854162|ref|YP_002471284.1| hypothetical protein CKR_0819 [Clostridium kluyveri NBRC 12016] gi|219567886|dbj|BAH05870.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 463 Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R LK+ C +C +C + SK+ + + ++ + + E+I +G Sbjct: 166 RTRAFLKIQDGCNRFCSYCLI-----PFARGPVCSKEPDKIIKEVKKLQVNNFKEIILSG 220 Query: 152 GDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 L K+L+ + IK + +R S +DP+ ++I + K Sbjct: 221 IHIASYGVDISGSWNLIKILEEIDKIKGIDRVRIGS----IDPKFFTEDIINRMASLTK- 275 Query: 207 VYIAIHA 213 + H Sbjct: 276 --LCPHF 280 >gi|153953540|ref|YP_001394305.1| oxidoreductase [Clostridium kluyveri DSM 555] gi|146346421|gb|EDK32957.1| Predicted oxidoreductase [Clostridium kluyveri DSM 555] Length = 434 Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 23/127 (18%), Positives = 47/127 (37%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R LK+ C +C +C + SK+ + + ++ + + E+I +G Sbjct: 137 RTRAFLKIQDGCNRFCSYCLI-----PFARGPVCSKEPDKIIKEVKKLQVNNFKEIILSG 191 Query: 152 GDPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 L K+L+ + IK + +R S +DP+ ++I + K Sbjct: 192 IHIASYGVDISGSWNLIKILEEIDKIKGIDRVRIGS----IDPKFFTEDIINRMASLTK- 246 Query: 207 VYIAIHA 213 + H Sbjct: 247 --LCPHF 251 >gi|83952182|ref|ZP_00960914.1| radical SAM domain protein [Roseovarius nubinhibens ISM] gi|83837188|gb|EAP76485.1| radical SAM domain protein [Roseovarius nubinhibens ISM] Length = 327 Score = 40.1 bits (93), Expect = 0.47, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 63/170 (37%), Gaps = 7/170 (4%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 DP P + +P+ + +C + C C+ + + ++ + A L Sbjct: 26 DPAVTAKGEPRASVPLSHPETLWFNTGTLCNITCVNCYIESSPNNDRLVYITEPEMRAYL 85 Query: 136 AYI-QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 + + E+ FTGG+P ++ + L V IL R P++ + Sbjct: 86 DELTARNWPVREIAFTGGEPF-MNPEMCAMARTALARGYEVLILTNAMR-PMMRKS-VQA 142 Query: 195 ELIQCLKEAGKPVYIAIHANHP-YEFSEEAI--AAISRLANAGIILLSQS 241 EL + + G + + I +H E ++ A +R + I L Q Sbjct: 143 ELAALIADYGPRLTLRISLDHWSEEMHDQMRGKQAFARTLDGMIWLRDQG 192 >gi|298383745|ref|ZP_06993306.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14] gi|298263349|gb|EFI06212.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14] Length = 443 Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C + + E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTVASMVEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + + Sbjct: 205 IGDFGKTTGETFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSRSRR---FM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|239625860|ref|ZP_04668891.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA] gi|239520090|gb|EEQ59956.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA] Length = 353 Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 39/84 (46%), Gaps = 3/84 (3%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + CR+C + + +LS ++ E A+A I + TGG+PL+ Sbjct: 14 ISITDRCNLRCRYCMPNGVESLARSEILSLEEIE-AIAICAASLGISRIKVTGGEPLVRR 72 Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182 +++K L+ I ++ + + Sbjct: 73 DC--CQLVKLLKSIPGIEKVTITT 94 >gi|193213822|ref|YP_001995021.1| radical SAM domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193087299|gb|ACF12574.1| Radical SAM domain protein [Chloroherpeton thalassium ATCC 35110] Length = 403 Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 15/107 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L+ +C +YC C+R ++K + S + L Q+ + GGDPL+ Sbjct: 26 LEPTALCNLYCDGCYRM----NEKDSHKSLDVVKQELDTFQKLRNSDCISIAGGDPLLHP 81 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAG 204 ++L + +K R + + + + + EL++ LK+AG Sbjct: 82 -----QILDIVADVK-----RRGLKPIVNTNGKALTMELLKDLKKAG 118 >gi|29347563|ref|NP_811066.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron VPI-5482] gi|253572024|ref|ZP_04849428.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|29339463|gb|AAO77260.1| putative Fe-S oxidoreductase [Bacteroides thetaiotaomicron VPI-5482] gi|251838204|gb|EES66291.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 443 Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C + + E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTVASMVEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + + Sbjct: 205 IGDFGKTTGETFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSRSRR---FM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|326554660|gb|ADZ89299.1| coproporphyrinogen III oxidase [Brucella melitensis M5-90] Length = 458 Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145 D L + C C +C T ++ KD + L Y+ +I Sbjct: 54 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 104 Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194 E+ F GG P I+ L ++ LR R + +DP+R+ P Sbjct: 105 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 157 Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 E+ L +G + + F + AI+R+ A L Sbjct: 158 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 196 >gi|283853643|ref|ZP_06370877.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio sp. FW1012B] gi|283570976|gb|EFC19002.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio sp. FW1012B] Length = 432 Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 43/179 (24%), Positives = 68/179 (37%), Gaps = 19/179 (10%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 EL+ILP + +G P + P LK+ C CR+C + G Sbjct: 105 LPTELDILPGRLAEALGAEAADPTGRLASTPPSYAYLKIAEGCDHACRYCTIPSIRGGLV 164 Query: 123 GTVLSS--KDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 L ++ L + S++ +V G D L L LQ +L+ L + ++ Sbjct: 165 SRPLPGLVEEARGLLD--RGVSELVVVAQDVTAYGRD-LGLKDG-LQALLEKLLPLSGLK 220 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISRLANA 233 LR + P + L+ L AG+P Y I H E +AA++R A Sbjct: 221 WLRL----LYLYPSGVTDGLLSFLAGAGRPFVPYFDIPFQH---VHPEMLAAMARPKAA 272 >gi|225686939|ref|YP_002734911.1| coproporphyrinogen III oxidase [Brucella melitensis ATCC 23457] gi|256042927|ref|ZP_05445873.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. Rev.1] gi|256261920|ref|ZP_05464452.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella melitensis bv. 2 str. 63/9] gi|265989360|ref|ZP_06101917.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. Rev.1] gi|225643044|gb|ACO02957.1| oxygen-independent coproporphyrinogen III oxidase [Brucella melitensis ATCC 23457] gi|263000029|gb|EEZ12719.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 1 str. Rev.1] gi|263091400|gb|EEZ15936.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella melitensis bv. 2 str. 63/9] gi|326411370|gb|ADZ68434.1| coproporphyrinogen III oxidase [Brucella melitensis M28] Length = 450 Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145 D L + C C +C T ++ KD + L Y+ +I Sbjct: 46 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 96 Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194 E+ F GG P I+ L ++ LR R + +DP+R+ P Sbjct: 97 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 149 Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 E+ L +G + + F + AI+R+ A L Sbjct: 150 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 188 >gi|21227624|ref|NP_633546.1| Fe-S oxidoreductase [Methanosarcina mazei Go1] gi|20906012|gb|AAM31218.1| Fe-S oxidoreductase [Methanosarcina mazei Go1] Length = 374 Score = 40.1 bits (93), Expect = 0.48, Method: Composition-based stats. Identities = 18/108 (16%), Positives = 42/108 (38%), Gaps = 1/108 (0%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R +++ CP C++C + G + + A Y + G D + Sbjct: 143 RAPIEISRGCPWGCKYCQTPRLFGREVRHRSIDSILKNAQHYNDLRFIASNAFAYGSDGI 202 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 +++K+L L + +I F + V P+ + E ++ +++ Sbjct: 203 HPRFDKVEKLLSALHKLPDKKIF-FGTFPSEVRPEFVTEESVELVRKY 249 >gi|291166609|gb|EFE28655.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Filifactor alocis ATCC 35896] Length = 483 Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 63/151 (41%), Gaps = 21/151 (13%) Query: 65 EELNILPEEREDPIGDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 ++L + D + D + ++G+ ++ + + +++ C +C +C + Sbjct: 153 QQLTSNAGQLID-VWDIDGQIIEGLPTTRKFDVKSFVNIMYGCNNFCTYC-----IVPYT 206 Query: 123 GTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLILSHKRLQK------VLKTLRYIKH 174 S++ + L I+ I E+ G + + K L++ +L+ + I Sbjct: 207 RGRERSREPKDILDEIRFLANEGIKEITLLGQN-VNSYGKTLEQNYTFADLLRDVNDIDG 265 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 ++ +RF S P+ ++ ELI + E K Sbjct: 266 IERIRFMSSH----PKDLSDELIDAMAELPK 292 >gi|225570522|ref|ZP_03779547.1| hypothetical protein CLOHYLEM_06624 [Clostridium hylemonae DSM 15053] gi|225160719|gb|EEG73338.1| hypothetical protein CLOHYLEM_06624 [Clostridium hylemonae DSM 15053] Length = 441 Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 25/166 (15%) Query: 64 KEELNILPE-ERED----PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV 118 KE L P E ED P+ ++ G + Y LK+ C +C +C ++ Sbjct: 113 KEALEGHPCMEMEDIDVLPLVESKRLVTTGGHYAY-----LKIAEGCDKHCTYCIIPKIR 167 Query: 119 GSQKGTVLSS--KDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKVLKTLRYI 172 G+ + + K+ EA Q ++ E G D I K L ++L+ L I Sbjct: 168 GNFRSVPMERLVKEAEALAE--QGVKELILVAQETTLYGKD--IYGEKSLHRLLRKLCGI 223 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPY 217 + ++ +R P+ I ELIQ +KE K Y+ + H Sbjct: 224 EGLRWIRI----LYCYPEEIYDELIQVIKEEKKICHYLDLPIQHAN 265 >gi|155241764|gb|ABT18046.1| heme d1 biosynthesis protein [Heliobacillus mobilis] Length = 331 Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 16/106 (15%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 + C ++C C+R G++ LS+ + + L I + + +IF+GG+PL+ Sbjct: 7 TTNQCNMFCDHCYRDA--GAKAEQELSTVEGKQLLDEIAK-AGFKIMIFSGGEPLMRPD- 62 Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG 204 + L + LR F + + I E+ + LK+AG Sbjct: 63 -----IVELVAYATSKGLRSVFGTNGTL-----ITREMARDLKKAG 98 >gi|53715679|ref|YP_101671.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46] gi|52218544|dbj|BAD51137.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46] Length = 479 Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 41/96 (42%), Gaps = 14/96 (14%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVL---SSKDTEAALAYIQE---------KSQI 144 +L+++ C + C++C E + + + + + Y+ + Sbjct: 84 LLIEVTDKCNLKCKYCGYGEFYSNYDRRETCNQTFDNVKVLIDYLANLWRSDYNVSHNNT 143 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 V F GG+PL L+ K +Q+ + + + H+ LRF Sbjct: 144 VTVGFYGGEPL-LNMKLIQETIAYIESL-HIDNLRF 177 >gi|317121910|ref|YP_004101913.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermaerobacter marianensis DSM 12885] gi|315591890|gb|ADU51186.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Thermaerobacter marianensis DSM 12885] Length = 517 Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 26/151 (17%), Positives = 53/151 (35%), Gaps = 12/151 (7%) Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFC----FR 114 +PQ E E + ++ + R + + +++ C YC FC R Sbjct: 165 LPQLIERVRREEGMVVDVWQAAEGVVEHLPSRRAGGVKAWVNIIYGCDKYCTFCIVPTTR 224 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + V++ + AA Y + V G D +L L + Sbjct: 225 GRERSRRPEDVIAEVEYLAAEGYKEVTLLGQNVNSYGKDLGTGFD--FADLLARLDRVPG 282 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 ++ +R+ + P+ +LI+ + E+ K Sbjct: 283 IRWIRYTTSH----PRDFTDKLIRTIAESDK 309 >gi|296157337|ref|ZP_06840173.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. Ch1-1] gi|295892673|gb|EFG72455.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. Ch1-1] Length = 457 Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 20/128 (15%), Positives = 42/128 (32%), Gaps = 21/128 (16%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153 + ++ C YC +C V S+ + L I + EV G + Sbjct: 148 TAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQN 202 Query: 154 ------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 L L + +++ + I ++ +R+ + P+ LI + Sbjct: 203 VNAYRGGLTLGSSEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQRLIDTYAKVP 258 Query: 205 KPVYIAIH 212 K + +H Sbjct: 259 K-LVSHLH 265 >gi|256112100|ref|ZP_05453036.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str. Ether] gi|265993540|ref|ZP_06106097.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str. Ether] gi|262764410|gb|EEZ10442.1| coproporphyrinogen III oxidase [Brucella melitensis bv. 3 str. Ether] Length = 450 Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 41/164 (25%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145 D L + C C +C T ++ KD + L Y+ +I Sbjct: 46 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-QPILDYLDVLHKEIEMIARQRG 96 Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194 E+ F GG P I+ L ++ LR R + +DP+R+ P Sbjct: 97 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 149 Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 E+ L +G + + F + AI+R+ A L Sbjct: 150 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 188 >gi|48478258|ref|YP_023964.1| molybdenum cofactor biosynthesis protein A [Picrophilus torridus DSM 9790] gi|48430906|gb|AAT43771.1| molybdenum cofactor biosynthesis protein A [Picrophilus torridus DSM 9790] Length = 611 Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 67/168 (39%), Gaps = 35/168 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTV--LSSKDTEAALAYIQEKSQI--WEVIFTGGDP 154 + + + C + C +CF + + S L ++ + + V TGG+P Sbjct: 152 IVVTNRCDLSCWYCF---FYAKENEPIYEPSLDQIRMMLRRMRNEKPVGANAVQITGGEP 208 Query: 155 LILSHKRLQKV-LKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + L+ + + HVQ+ +R + +P+ ++ ++EAG V I Sbjct: 209 -TMRDDILEVIKIAREEGYDHVQLNTNSIR----------EAYDPDFVRKVREAGSNV-I 256 Query: 210 AIHA------NHPYEFSEEAIAAISRLANA--GIILLSQSVLLKGIND 249 ++P F E AA+ A G++L+ ++ GIND Sbjct: 257 YTSFDGPTPRSNPKNF-WEIPAALENYRKAPLGVVLV--PTVIGGIND 301 >gi|189500918|ref|YP_001960388.1| MiaB-like tRNA modifying enzyme [Chlorobium phaeobacteroides BS1] gi|189496359|gb|ACE04907.1| MiaB-like tRNA modifying enzyme [Chlorobium phaeobacteroides BS1] Length = 451 Score = 40.1 bits (93), Expect = 0.49, Method: Composition-based stats. Identities = 45/233 (19%), Positives = 87/233 (37%), Gaps = 39/233 (16%) Query: 22 KEQIDEIKEISNHYS---IALTPVIANL-------INPHNPNDPIARQFIPQKEELNILP 71 ++ +I+++ Y IA+T A + I+ + + ++IP+K ++ Sbjct: 61 QKSRQQIRKMIKKYPLSRIAVTGCYAQMYPDSVETIDGVHVILGVREKYIPEKYIKDVQE 120 Query: 72 E-EREDPIGDN--NHSPLKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQK--- 122 RE + + P ++ + R LK+ C C +C G + Sbjct: 121 AVYREVASPETIKDAEPAHSLIEKREKGRTRAFLKIQDGCDYACAYCTIPLARGKSRSVP 180 Query: 123 -GTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQIL 178 TVL+ A Y E++ TG D + + +L+ L + V + Sbjct: 181 LETVLAGAVRLAEAGY-------REIVLTGVNIADYRSGRNTFVDLLLE-LESVD-VSRI 231 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLA 231 R S ++P ++ LI + + K I H + P + +AI A R Sbjct: 232 RISS----IEPDILSDRLIDTVASSSK---IMPHFHLPLQSGSDAILAAMRRR 277 >gi|255528303|ref|ZP_05395115.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium carboxidivorans P7] gi|255508005|gb|EET84433.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium carboxidivorans P7] Length = 171 Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 5/60 (8%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R+L C C+ CF G L +D + L I++ + V F+GGDP Sbjct: 25 RVLF--SQGCKHNCKGCF-NPSTHCYDGGEL--RDMDELLDDIRKNPMLKGVTFSGGDPF 79 >gi|120611327|ref|YP_971005.1| molybdenum cofactor biosynthesis protein A [Acidovorax citrulli AAC00-1] gi|120589791|gb|ABM33231.1| GTP cyclohydrolase subunit MoaA [Acidovorax citrulli AAC00-1] Length = 386 Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G G +LS ++ + ++ TGG+ Sbjct: 51 ISVTDRCNFRCSYCMPKEVFGKDYPYLSHGDLLSFEEITRLARVFLAH-GVRKIRLTGGE 109 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ + L+ +++ L + Sbjct: 110 PLL--RRHLENLVEQLAGL 126 >gi|317010566|gb|ADU84313.1| hypothetical protein HPSA_01445 [Helicobacter pylori SouthAfrica7] Length = 418 Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C V + + K E + + EV+ TG + Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCNKGVQEVVLTGTN 189 Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + + +++K L I ++ +R S Sbjct: 190 VGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|225568730|ref|ZP_03777755.1| hypothetical protein CLOHYLEM_04809 [Clostridium hylemonae DSM 15053] gi|225162229|gb|EEG74848.1| hypothetical protein CLOHYLEM_04809 [Clostridium hylemonae DSM 15053] Length = 427 Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 50/125 (40%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R +K+ C +C +C + + S+ E+ LA ++ ++ EV+ TG Sbjct: 141 HTRAYIKVQDGCNQFCSYC-----IIPYARGRVRSRKRESVLAEVRRLAEGGYKEVVLTG 195 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + + L ++++ + ++ +R S ++P+ + E Q L K Sbjct: 196 IHLSSYGVDTGDDLLRLIEAVHGTDGIERIRLGS----LEPRIVTEEFAQALAGLPK--- 248 Query: 209 IAIHA 213 I H Sbjct: 249 ICPHF 253 >gi|254479101|ref|ZP_05092453.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Carboxydibrachium pacificum DSM 12653] gi|214034950|gb|EEB75672.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Carboxydibrachium pacificum DSM 12653] Length = 436 Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 30/175 (17%) Query: 59 QFIPQKEELN----ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 Q + EE+ +L D + D + I+ P LK+ C C FC Sbjct: 107 QIVDVIEEVKKGKKVLKYGHPDLLNDEG---IPRILTTPPYYAYLKIAEGCSNACSFCII 163 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP----------LILSHKRLQK 164 ++ G K + E A + + E+I D L+L + Sbjct: 164 PKLRGKYKSRKM-ENIIEEAQE--LARKGVKELIIIAQDTTKYGIDLYKKLMLP-----Q 215 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYE 218 +L+ L I+ ++ +R P + ELI+ +K K V YI I H E Sbjct: 216 LLRELSKIEELKWIRL----LYAYPDSVTDELIEEIKNNEKIVKYIDIPLQHSSE 266 >gi|217076998|ref|YP_002334714.1| Fe-S oxidoreductase [Thermosipho africanus TCF52B] gi|217036851|gb|ACJ75373.1| Fe-S oxidoreductase [Thermosipho africanus TCF52B] Length = 429 Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 16/126 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C R G++ + L + E++ TG Sbjct: 136 RTRAFIKVQDGCTNTCSYCAIRFARGNKIRSKPVDLVVSEVLRLV--NKDYKEIVITG-- 191 Query: 154 PLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 L L L ++L++L IK +R S ++P+ ++ ELI + K + Sbjct: 192 -LNLGKFGKDIDSSLHELLRSLVKIKGDFRIRLSS----INPEDLDEELISLIGAEEK-I 245 Query: 208 YIAIHA 213 +H Sbjct: 246 CNHLHI 251 >gi|167042814|gb|ABZ07532.1| putative TatD related DNase [uncultured marine microorganism HF4000_ANIW137I15] Length = 482 Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 16/129 (12%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEK 141 +P+ IV++ + L L + C C +C R + +G + D + ++ Sbjct: 281 NPVPQIVYKMHGALHLNLTYTCTNNCFYCPRFSSDYLGGHNLKLDRDPDPDEIWEALKAF 340 Query: 142 SQIWE-VIFTG-GDPLILSHKRLQKVLKTLRYI-KHVQILR------FHSRVPIVDPQRI 192 I + V F+G G+PL L L+++ ++ V++L H R V P+ Sbjct: 341 GDIRQLVTFSGYGEPL-LRLDVLKEIAGRIKEAGGTVRVLTNGQGNLIHGR--NVLPE-- 395 Query: 193 NPELIQCLK 201 L+ L+ Sbjct: 396 LQGLVDQLR 404 >gi|152992903|ref|YP_001358624.1| type II restriction-modification enzyme, R and M protein [Sulfurovum sp. NBC37-1] gi|151424764|dbj|BAF72267.1| type II restriction-modification enzyme, R and M protein [Sulfurovum sp. NBC37-1] Length = 1232 Score = 40.1 bits (93), Expect = 0.50, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 15/78 (19%) Query: 271 LHHPDLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 L D A G+ HF ++ + +I + L+ + D G K Sbjct: 521 LSICDPAVGSGHFLVSSLNTILEIKSQLR----------ILFDAEGKRIK----DDYELS 566 Query: 330 VGNGSYCITDHHNIVHDY 347 V N + D + +Y Sbjct: 567 VENDELIVRDDEGEIFEY 584 >gi|320352216|ref|YP_004193555.1| Radical SAM domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320120718|gb|ADW16264.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032] Length = 335 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 42/185 (22%), Positives = 66/185 (35%), Gaps = 24/185 (12%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWE---VIFTGGD 153 + CP C FC +R + G V S+ E ++ + + E V GG Sbjct: 7 IFIPHEGCPHRCIFCDQRRISGQVAPPVDSNGVAETIRVWLARSRPDRRERVQVALYGGS 66 Query: 154 PLILSHKRLQKVL---KTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-I 209 L +R +++L + R VQ +R +R P I+ + L+E G + + Sbjct: 67 FTGLPVERQRELLAAVQPFRRHGLVQEIRLSTR-----PDLIDSGRLDLLEEYGVSIVEL 121 Query: 210 AIHANHPYEFS--------EEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRT 260 + A +L G L Q +L L G D IL + T Sbjct: 122 GAQSCDDRVLRLAGRGHGGAAVEDAARQLRERGFGLGIQLMLGLPG--DSFRILRQTVAT 179 Query: 261 FVELR 265 V LR Sbjct: 180 VVSLR 184 >gi|295697188|ref|YP_003590426.1| molybdenum cofactor biosynthesis protein A [Bacillus tusciae DSM 2912] gi|295412790|gb|ADG07282.1| molybdenum cofactor biosynthesis protein A [Bacillus tusciae DSM 2912] Length = 344 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 38/89 (42%), Gaps = 5/89 (5%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 G VH Y + + + C + C +C V + L + + + + + + + Sbjct: 21 GRVHDY---LRISVTDRCNLRCLYCMPAHGVQFMESRRLMTYEEIVTVVRVAARLGVKRL 77 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 TGG+PL+ + ++++ L I ++ Sbjct: 78 RITGGEPLVRPD--IDRLIEALGAIPGIE 104 >gi|291536277|emb|CBL09389.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseburia intestinalis M50/1] Length = 496 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 55/134 (41%), Gaps = 23/134 (17%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + +Y + + ++ C +C +C + G ++ K+ + + + E++ Sbjct: 199 VERKYSFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--KEIIREIERLAAD-GVVEIM 255 Query: 149 FTGGD----------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 G + P+ ++L+ + + ++ +RF + P+ ++ +LI+ Sbjct: 256 LLGQNVNSYGKNLEQPMTF-----AQLLQEIEKVDGIERIRFMTSH----PKDLSDDLIE 306 Query: 199 CLKEAGKPVYIAIH 212 +K + K + +H Sbjct: 307 VMKNS-KKICKHLH 319 >gi|169830380|ref|YP_001716362.1| radical SAM domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169637224|gb|ACA58730.1| Radical SAM domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 370 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 11/118 (9%) Query: 61 IPQKEE---LNILPEEREDPIGDNNHSPLKG----IVHRYPDRILLKLLHVCPVYCRFCF 113 +P +EE L + D + + G VH R +++ + C C +C Sbjct: 39 VPTREEIVALLTAGDADTDALYRAADAVRAGHVGDTVHL---RAIIEFSNHCVQNCLYCG 95 Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 R +S + AA A +++ V+ +G DP L +++ L+ Sbjct: 96 LRRNNRRLFRYRMSPDEIFAAAAVARDQGYRTVVLQSGEDPGY-PTSELARLVHRLKD 152 >gi|160933769|ref|ZP_02081157.1| hypothetical protein CLOLEP_02630 [Clostridium leptum DSM 753] gi|156867646|gb|EDO61018.1| hypothetical protein CLOLEP_02630 [Clostridium leptum DSM 753] Length = 429 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 26/150 (17%), Positives = 53/150 (35%), Gaps = 23/150 (15%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF----RREMV 118 ++ E+ I P +D + R R LK+ C +C +C R + Sbjct: 115 RRREVKIRPYTGKDSF---ESLQIHSFQER--TRAFLKIQDGCNRFCSYCIIPYSRGRVR 169 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-PLILSHKRLQKV--LKTLRYIKHV 175 + T AA Y E++ TG + L ++ + + V Sbjct: 170 SKPLEELTREARTLAASGY-------REIVLTGINLSCYGQDSGLGLWDAVEAVCGLPEV 222 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + +R S ++P+++ +++ L K Sbjct: 223 ERVRLGS----LEPEQMELPVLERLARQEK 248 >gi|222480620|ref|YP_002566857.1| MiaB-like tRNA modifying enzyme [Halorubrum lacusprofundi ATCC 49239] gi|222453522|gb|ACM57787.1| MiaB-like tRNA modifying enzyme [Halorubrum lacusprofundi ATCC 49239] Length = 434 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 7/88 (7%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 +L + C C +C + + + ++ E A A + + E+ TG D + Sbjct: 126 ILPIARGCMSNCSYCITK-FATGRVDSPTVEENVEKARALV--HAGAKEIRVTGQDTGVY 182 Query: 158 S----HKRLQKVLKTLRYIKHVQILRFH 181 ++L ++L + I +R Sbjct: 183 GWDNGDRKLPELLDRICDIDGDFRVRLG 210 >gi|118444753|ref|YP_878562.1| MiaB-like tRNA modifying enzyme [Clostridium novyi NT] gi|118135209|gb|ABK62253.1| MiaB-like tRNA modifying enzyme [Clostridium novyi NT] Length = 433 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 28/130 (21%), Positives = 44/130 (33%), Gaps = 25/130 (19%) Query: 94 PDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R LK+ C +C +C F R V S+ ++ + + E+I + Sbjct: 141 KTRAFLKIQDGCNNFCSYCLIPFARGAVCSKNPEII----IDEVKK-LAAH-GFKEIILS 194 Query: 151 GGDPLIL-----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--QCLKEA 203 G D L +LK + I + +R S I PE +KE Sbjct: 195 GIDISSYGVDLEGDWNLLTILKKIDEIDGITRVRIGS---------IGPEFFNEDRIKEI 245 Query: 204 GKPVYIAIHA 213 GK + H Sbjct: 246 GKLKKLCPHF 255 >gi|167040005|ref|YP_001662990.1| radical SAM domain-containing protein [Thermoanaerobacter sp. X514] gi|300914096|ref|ZP_07131412.1| Radical SAM domain protein [Thermoanaerobacter sp. X561] gi|307724670|ref|YP_003904421.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513] gi|166854245|gb|ABY92654.1| Radical SAM domain protein [Thermoanaerobacter sp. X514] gi|300889031|gb|EFK84177.1| Radical SAM domain protein [Thermoanaerobacter sp. X561] gi|307581731|gb|ADN55130.1| Radical SAM domain protein [Thermoanaerobacter sp. X513] Length = 460 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 37/77 (48%), Gaps = 2/77 (2%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157 + + C + C++C+ +Q +++ + E +I+ ++ ++F GG+PL L Sbjct: 86 IHTSNECNLKCKYCYANHGDYNQGQAIMTEEIAEKVADFIKLNFPKVKVIVFFGGEPL-L 144 Query: 158 SHKRLQKVLKTLRYIKH 174 K + K+ + + H Sbjct: 145 GFKAIGKICEKMGKETH 161 >gi|167037358|ref|YP_001664936.1| radical SAM domain-containing protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|320115773|ref|YP_004185932.1| Radical SAM domain-containing protein [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166856192|gb|ABY94600.1| Radical SAM domain protein [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|319928864|gb|ADV79549.1| Radical SAM domain protein [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 460 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 15/77 (19%), Positives = 37/77 (48%), Gaps = 2/77 (2%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157 + + C + C++C+ +Q +++ + E +I+ ++ ++F GG+PL L Sbjct: 86 IHTSNECNLKCKYCYANHGDYNQGQAIMTEEIAEKVADFIKLNFPKVKVIVFFGGEPL-L 144 Query: 158 SHKRLQKVLKTLRYIKH 174 K + K+ + + H Sbjct: 145 GFKAIGKICEKMGKETH 161 >gi|189345895|ref|YP_001942424.1| RNA modification enzyme, MiaB family [Chlorobium limicola DSM 245] gi|189340042|gb|ACD89445.1| RNA modification enzyme, MiaB family [Chlorobium limicola DSM 245] Length = 458 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 16/140 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C C +C G + L S++ A + S E++ TG Sbjct: 155 RTRAFLKIQDGCDYACAYCTIPHARG--RSRSLPSEELVARARSL-AFSGYREIVLTGVN 211 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD L +L+ L + V +R S ++P ++ ELI+ + + K I Sbjct: 212 IGD-YRGHASGLVGLLRMLEDV-SVDRIRISS----LEPDILDDELIETVAASKK---IT 262 Query: 211 IHANHPYEFSEEAI-AAISR 229 H + P + ++I A+ R Sbjct: 263 PHFHVPLQSGSDSILKAMRR 282 >gi|218128607|ref|ZP_03457411.1| hypothetical protein BACEGG_00177 [Bacteroides eggerthii DSM 20697] gi|317475589|ref|ZP_07934851.1| MiaB-like tRNA modifying enzyme [Bacteroides eggerthii 1_2_48FAA] gi|217989209|gb|EEC55523.1| hypothetical protein BACEGG_00177 [Bacteroides eggerthii DSM 20697] gi|316908293|gb|EFV29985.1| MiaB-like tRNA modifying enzyme [Bacteroides eggerthii 1_2_48FAA] Length = 443 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 14/140 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C YC +C + + E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYYCSYCTI-PFARGRSRNGSVASLVEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + + Sbjct: 205 IGDFGKTTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEFVSRSKR---FM 257 Query: 211 IHANHP-YEFSEEAIAAISR 229 H + P S+E + + R Sbjct: 258 PHFHIPLQSGSDEVLKLMRR 277 >gi|297583836|ref|YP_003699616.1| radical SAM domain-containing protein [Bacillus selenitireducens MLS10] gi|297142293|gb|ADH99050.1| Radical SAM domain protein [Bacillus selenitireducens MLS10] Length = 378 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ +L C + C C R E ++ LS + +A + ++ + ++FTGGD Sbjct: 11 PFIVIWELTRACELKCLHC-RAEAQYTRDPRELSFDEGKALIDTFKDMNNPM-LVFTGGD 68 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 PL+ + + + +R S P P + E ++ KE G + Sbjct: 69 PLMRED------VFDIASYAISRGIRV-SMTPSATPN-VTLEAMKKAKEVGLSRWAFSLD 120 Query: 209 -----IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H Y+ + + AIS L + + +V+ + D + +A + Sbjct: 121 GPNAAIHDHFRGTEGSYQLTTD---AISYLHELELPVQINTVISRYNIDCLDEMAAKVEE 177 Query: 261 F 261 Sbjct: 178 L 178 >gi|14591248|ref|NP_143325.1| hypothetical protein PH1458 [Pyrococcus horikoshii OT3] gi|3257882|dbj|BAA30565.1| 587aa long hypothetical protein [Pyrococcus horikoshii OT3] Length = 587 Score = 40.1 bits (93), Expect = 0.51, Method: Composition-based stats. Identities = 36/176 (20%), Positives = 68/176 (38%), Gaps = 31/176 (17%) Query: 91 HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ----EKS-QI 144 HR ++ + L + C + C +CF +++G + E ++ E Sbjct: 134 HRSHTSLINIVLTNRCNLSCWYCF----FYAREGEPIYEPTLEQIRMMLRNAKKEHPIGA 189 Query: 145 WEVIFTGGDPLILSHKRLQKV-LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 V FTGG+P L ++ + + H+Q+ ++ +PEL++ L+EA Sbjct: 190 NAVQFTGGEP-TLRDDLIEIIKIAKEEGYDHIQLNTDGIKL------AFDPELVKKLREA 242 Query: 204 GKPVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 G + NH E + + GI+L+ L++ IND Sbjct: 243 GVNTLYLSYDGMTPQTNWKNHW-EI-PLIFENVRKAGGPGIVLV--PTLIRNINDH 294 >gi|329963574|ref|ZP_08301053.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides fluxus YIT 12057] gi|328528563|gb|EGF55534.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides fluxus YIT 12057] Length = 432 Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFT 150 LK+ C C +C + G K ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--KHVSRPMEEILDEVRYLVAGGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GVD--LYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPEDLFRVMRERPN 244 >gi|319759064|gb|ADV71006.1| metallo cofactor biosynthesis protein [Streptococcus suis JS14] Length = 413 Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 YP +I+++L + C + C CF+ G L ++ L + K +++E+ TGG Sbjct: 100 YPRKIVIELTNKCHLQCTHCFKEA--GPINRNFLKYEELINFLD--RVKGKVYEIQLTGG 155 Query: 153 DPLILS 158 +P+ Sbjct: 156 EPMAHP 161 >gi|291288343|ref|YP_003505159.1| molybdenum cofactor biosynthesis protein A [Denitrovibrio acetiphilus DSM 12809] gi|290885503|gb|ADD69203.1| molybdenum cofactor biosynthesis protein A [Denitrovibrio acetiphilus DSM 12809] Length = 332 Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 65/164 (39%), Gaps = 22/164 (13%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C C++C + Q +LS ++ A+ + +V TGG+PL+ Sbjct: 21 VSVTDRCNFRCKYCMPTTDFKCLQHENILSYEELLFAVDVFCS-LGVKKVRVTGGEPLV- 78 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 K + L+ L ++ ++ + + + E + +K AG + + + Sbjct: 79 -RKGIGSFLEGLGKMEKLEEVTLTTNG------ALLKEFTEQIKSAGIQ-RVNVSLDSLQ 130 Query: 218 E-----FSEEAI-----AAISRLANAGI-ILLSQSVLLKGINDD 250 E + +I + AGI + + V++KG NDD Sbjct: 131 EERYKDITGGFKLEKIIDSIKHVQRAGIGPVKTNMVVIKGYNDD 174 >gi|156937491|ref|YP_001435287.1| radical SAM domain-containing protein [Ignicoccus hospitalis KIN4/I] gi|156566475|gb|ABU81880.1| Radical SAM domain protein [Ignicoccus hospitalis KIN4/I] Length = 352 Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 20/161 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C FC E G LS D + +A + + V FTGG+PL+ S Sbjct: 15 VSVTERCNFNCIFCH-SEGAGRGSFDELSVNDYD-MIAEATSRLGLKYVKFTGGEPLLRS 72 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHA---N 214 L++++ + + + + + + P+R + LKEAG + +++H+ Sbjct: 73 D--LEEIIHSFKEHGFEE-ISITTNGFL-LPER-----TEGLKEAGVSWINVSLHSLKRQ 123 Query: 215 HPYEFSEE-----AIAAISRLANAGIILLSQSVLLKGINDD 250 + + I + GI + V+L+GIN+D Sbjct: 124 RFRRITGVDALNRVLNGIEKALENGIEVRVNVVVLRGINED 164 >gi|146319650|ref|YP_001199362.1| metallo cofactor biosynthesis protein [Streptococcus suis 05ZYH33] gi|146321848|ref|YP_001201559.1| metallo cofactor biosynthesis protein [Streptococcus suis 98HAH33] gi|253752648|ref|YP_003025789.1| radical SAM superfamily protein [Streptococcus suis SC84] gi|253754474|ref|YP_003027615.1| radical SAM superfamily protein [Streptococcus suis P1/7] gi|253756407|ref|YP_003029547.1| radical SAM superfamily protein [Streptococcus suis BM407] gi|145690456|gb|ABP90962.1| metallo cofactor biosynthesis protein [Streptococcus suis 05ZYH33] gi|145692654|gb|ABP93159.1| metallo cofactor biosynthesis protein [Streptococcus suis 98HAH33] gi|251816937|emb|CAZ52586.1| radical SAM superfamily protein [Streptococcus suis SC84] gi|251818871|emb|CAZ56714.1| radical SAM superfamily protein [Streptococcus suis BM407] gi|251820720|emb|CAR47482.1| radical SAM superfamily protein [Streptococcus suis P1/7] gi|292559267|gb|ADE32268.1| metallo cofactor biosynthesis protein [Streptococcus suis GZ1] Length = 415 Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 YP +I+++L + C + C CF+ G L ++ L + K +++E+ TGG Sbjct: 102 YPRKIVIELTNKCHLQCTHCFKEA--GPINRNFLKYEELINFLD--RVKGKVYEIQLTGG 157 Query: 153 DPLILS 158 +P+ Sbjct: 158 EPMAHP 163 >gi|76802239|ref|YP_327247.1| hypothetical protein NP3198A [Natronomonas pharaonis DSM 2160] gi|76558104|emb|CAI49690.1| conserved hypothetical protein [Natronomonas pharaonis DSM 2160] Length = 414 Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 15/88 (17%), Positives = 33/88 (37%), Gaps = 7/88 (7%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 +L + C C +C + + + +++ E A A + + E+ TG D + Sbjct: 124 ILPIARGCMSNCSYCITK-FATGRVDSPPVAENVEKARALV--HAGAKELRITGQDTGVY 180 Query: 158 SHK----RLQKVLKTLRYIKHVQILRFH 181 +L ++L + I +R Sbjct: 181 GWDTGERKLPELLDRICDIDGEFRVRLG 208 >gi|291522428|emb|CBK80721.1| SSU ribosomal protein S12P methylthiotransferase [Coprococcus catus GD/7] Length = 454 Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 9/111 (8%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 LK+ C +C +C ++ GS + ++ ++ AA + E G D Sbjct: 156 LKIAEGCDKHCTYCIIPKLRGSYRSHSMDYLIKQAESLAAQGVKELNIVAQETTVYGTD- 214 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L K L ++LK L I+ + +R V P+ IN ELIQ +KE K Sbjct: 215 LYNGQKMLPELLKRLCRIEGLSWIR----VLYCYPEEINEELIQVIKEEPK 261 >gi|290968565|ref|ZP_06560103.1| MiaB-like protein [Megasphaera genomosp. type_1 str. 28L] gi|290781218|gb|EFD93808.1| MiaB-like protein [Megasphaera genomosp. type_1 str. 28L] Length = 440 Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 20/148 (13%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 D + P + H R LK+ C +C +C + L S+ + Sbjct: 129 HSPDEFEEIPLYPAA-VTH---TRADLKIQEGCNNFCTYC-----IIPYTRGKLKSRRPD 179 Query: 133 AALAYIQEKSQ--IWEVIFTGGDPL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 A + + + E++ TG + L +L+ L V LR S Sbjct: 180 AIVEEAKRLVEAGFKELVLTGIHLGAYGKELAEKPTLAHILRRLVEETDVLRLRLGS--- 236 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIHA 213 +D ++ +LI+ + EA + + +H Sbjct: 237 -IDSLEVDDDLIRIINEAEQRICPHLHI 263 >gi|282858353|ref|ZP_06267533.1| translation initiation factor IF-1 [Prevotella bivia JCVIHMP010] gi|282588801|gb|EFB93926.1| translation initiation factor IF-1 [Prevotella bivia JCVIHMP010] Length = 72 Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ +E G +I+ ISG + YI LPG KV++ +++ K G Sbjct: 22 FRVELENGVEII----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70 >gi|282882041|ref|ZP_06290682.1| hypothetical protein HMPREF0628_0687 [Peptoniphilus lacrimalis 315-B] gi|281298071|gb|EFA90526.1| hypothetical protein HMPREF0628_0687 [Peptoniphilus lacrimalis 315-B] Length = 437 Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 14/108 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GG 152 +K+ C C +C ++ G + + +D ++Y+ + ++ G Sbjct: 147 VKISEGCNNNCSYCIIPKLRGKNRSRRI--EDIYEEVSYLAKNGAREIILIAQNTTDYGI 204 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 D + L K++K + I ++ +R V + P ELI Sbjct: 205 D--LYGRYSLSKLIKEISKINDIKWIR----VLYLYPDHFTDELINEF 246 >gi|269956621|ref|YP_003326410.1| molybdenum cofactor biosynthesis protein A [Xylanimonas cellulosilytica DSM 15894] gi|269305302|gb|ACZ30852.1| molybdenum cofactor biosynthesis protein A [Xylanimonas cellulosilytica DSM 15894] Length = 380 Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 40/195 (20%), Positives = 78/195 (40%), Gaps = 23/195 (11%) Query: 86 LKGIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEK 141 + G+V R+ + L C + C +C E + K V+S + + + Sbjct: 47 VPGLVDRFGRTATDLRVSLTDRCNLRCTYCMPAEGLPTLPKDAVMSRTEIARLVGVATRE 106 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + +V FTGG+PL+ + L +++ + + + + + L+ Sbjct: 107 LGVRQVRFTGGEPLLRAD--LVDIVRDVAALPQRPEISLTTNAVG------LDHRARALR 158 Query: 202 EAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI--------ILLSQSVLLKGINDD-- 250 +AG V I++ P F+ A AGI ++ +VL++G+N D Sbjct: 159 DAGLDRVNISLDTLDPDTFARLARRPFLERTLAGISAAAEVFDVIKINAVLVRGLNLDHA 218 Query: 251 PEILANLMRTFVELR 265 ++LA + ELR Sbjct: 219 ADLLAWCLERGFELR 233 >gi|154249651|ref|YP_001410476.1| MiaB-like tRNA modifying enzyme [Fervidobacterium nodosum Rt17-B1] gi|154153587|gb|ABS60819.1| MiaB-like tRNA modifying enzyme [Fervidobacterium nodosum Rt17-B1] Length = 421 Score = 40.1 bits (93), Expect = 0.52, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 55/156 (35%), Gaps = 27/156 (17%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E +I E +D I + R +K+ C C +C R + G++ Sbjct: 110 YWREDDISYEMVKDSIAE-------------RSRAFIKVEDGCNNGCTYCVIRSLRGTRI 156 Query: 123 GTVLSSKDTEAALAYI-QEKSQIWEVIFT----GGDPLILSHKRLQKVLKTLRYIKHVQI 177 + + A I ++ ++ G D L K+L + I Sbjct: 157 RSKPIEVVIKEAEQLITKKHKELVITGLNLGKYGKDIGT----NLAKLLNEVSKINGDFR 212 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 +R S ++P+ ++ ELI + E K + +H Sbjct: 213 IRLSS----INPEDLDDELINIILENDK-ICNHLHI 243 >gi|310640976|ref|YP_003945734.1| radical sam domain-containing protein [Paenibacillus polymyxa SC2] gi|309245926|gb|ADO55493.1| Radical SAM domain-containing protein [Paenibacillus polymyxa SC2] Length = 377 Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGD----PL 155 +VC VYCRFC GS +G VL E I+E ++ E++ GG P Sbjct: 62 TNVCDVYCRFCAFYRRPGSDEGYVLPD---EVIFQKIKETQEVGGTEILMQGGVNPNLPF 118 Query: 156 ILSHKRLQKVLKTLRYI 172 L+ + + I Sbjct: 119 SYYTDLLKAIKERFPDI 135 >gi|293402280|ref|ZP_06646418.1| pyruvate-formate lyase-activating enzyme [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304387|gb|EFE45638.1| pyruvate-formate lyase-activating enzyme [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 379 Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 24/104 (23%), Positives = 52/104 (50%), Gaps = 12/104 (11%) Query: 76 DPIGDNNHSPLKGIVHR----YPDRILLKL-LHVCPVYCRFCFRREMVG-SQKGTVLSSK 129 D + D L G+ YP ++ + C + C FC ++V ++ + + +K Sbjct: 142 DAMEDEKEIKLFGLQKLTLLDYPQKMASTIFTGGCNMRCPFCQNADLVFLNENTSQIPTK 201 Query: 130 DTEAALAYIQEKSQIWE-VIFTGGDPLILSHKRLQKVLKTLRYI 172 D +A+++++ + E V TGG+PL+ + L+ L+T++ + Sbjct: 202 DI---IAFLKKRRSVLEGVCITGGEPLL--NDTLESFLRTIKEL 240 >gi|256821541|ref|YP_003145504.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Kangiella koreensis DSM 16069] gi|256795080|gb|ACV25736.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Kangiella koreensis DSM 16069] Length = 446 Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%) Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWE 146 + ++ C YC FC R E V VL+ + + + + + Sbjct: 148 TAFVSVMEGCSKYCSFCVVPYTRGEEVSRPFDDVLAECAQLAEQGVREINLLGQNVNAYR 207 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR---INPELIQCLKEA 203 I GD L +++ + I + +R+ + P+ +R + E+ + + Sbjct: 208 GITHEGD-----TADLAELITYVAAIDGIDRIRYTTSHPVEFSERLIQVYAEVPELVSHL 262 Query: 204 GKPV 207 PV Sbjct: 263 HLPV 266 >gi|163759697|ref|ZP_02166782.1| molybdenum cofactor biosynthesis protein A [Hoeflea phototrophica DFL-43] gi|162283294|gb|EDQ33580.1| molybdenum cofactor biosynthesis protein A [Hoeflea phototrophica DFL-43] Length = 345 Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 69/179 (38%), Gaps = 39/179 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + E + ++ TGG+PL+ Sbjct: 30 VSVTDRCDFRCTYCMAENMTFLPKKDLLTLEELDRLCTVFVE-KGVRKIRLTGGEPLV-- 86 Query: 159 HKRLQKVLKTLR------YIKHV-------QILRFHS-------RVPIVDPQRINPELIQ 198 K + ++++ L + V Q+ RF S R V ++P+ + Sbjct: 87 RKNIMQLIRGLSRHIDAGRMDEVTLTTNGSQLTRFASELYDCGVRRINVSIDTLDPDKFR 146 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILA 255 + G E ++ + ++ AG+ + +V LKG ND P+++ Sbjct: 147 QITRWG-------------ELAK-VLDGVAAAQAAGLKIKINAVALKGFNDTEIPDMMK 191 >gi|90416925|ref|ZP_01224854.1| hypothetical protein GB2207_06678 [marine gamma proteobacterium HTCC2207] gi|90331272|gb|EAS46516.1| hypothetical protein GB2207_06678 [marine gamma proteobacterium HTCC2207] Length = 296 Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 10/88 (11%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ----IWEVIFTG 151 ++L++ + C C FC + + + S K E ++ ++ + V Sbjct: 20 LILQVTNGCSYNKCSFC----EMYTDQQKRFSPKPIEKIEEELRGLAEAGYPVKRVFLAD 75 Query: 152 GDPLILSHKRLQKVLKTLRY-IKHVQIL 178 GD + LS +RL +L+ + VQ + Sbjct: 76 GDAMTLSTRRLVDILQMINKYYPDVQRV 103 >gi|24375930|ref|NP_719973.1| molybdenum cofactor biosynthesis protein A [Shewanella oneidensis MR-1] gi|24350912|gb|AAN57417.1|AE015877_8 molybdenum cofactor biosynthesis protein A [Shewanella oneidensis MR-1] Length = 326 Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 59/160 (36%), Gaps = 17/160 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + VC C +C + K LS + E ++ ++ TGG+P + Sbjct: 17 MSVTDVCNFKCSYCLPDGYHPNGKQQFLSLSEIENLVSAF-SLVGTQKIRITGGEPTLRK 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217 +++ + R H+ + R+ + + + +++ + P Sbjct: 76 D--FTDIIRVVADNP-----RIHTVATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 128 Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249 + + E + I +AG + +VLLKG+ND Sbjct: 129 FYQITGENKFDEVMRGIDAALSAGFERVKVNAVLLKGMND 168 >gi|57234236|ref|YP_181685.1| MiaB family tRNA modification protein [Dehalococcoides ethenogenes 195] gi|57224684|gb|AAW39741.1| tRNA modification enzyme, MiaB family [Dehalococcoides ethenogenes 195] Length = 413 Score = 40.1 bits (93), Expect = 0.53, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 40/113 (35%), Gaps = 19/113 (16%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWE 146 R +K+ C +C +C RR + ++S + A Y + ++I E Sbjct: 126 RTRSFIKIQDGCDNFCSYCIVPFVRRHKSCRRVDEIISEINLRQAEGYQEIVLTGTEIGE 185 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 G D L +++ + + LR S + P I P L+ Sbjct: 186 YASGGVD--------LAGLIEAILANTQIPRLRLSS----LQPGEITPRLLAL 226 >gi|313896785|ref|ZP_07830333.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral taxon 137 str. F0430] gi|312974702|gb|EFR40169.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral taxon 137 str. F0430] Length = 332 Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 36/81 (44%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + CR+C V +LS ++ + + I +V TGG+PL+ Sbjct: 14 ISVTDCCNLRCRYCMPAHGVKKLAHEDILSYEEILRDVRALAA-LGIRKVRLTGGEPLVR 72 Query: 158 SHKRLQKVLKTLRYIKHVQIL 178 + +++ L+ I ++ + Sbjct: 73 RD--IVTLVRGLKEIPGIETV 91 >gi|301064673|ref|ZP_07205062.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [delta proteobacterium NaphS2] gi|300441215|gb|EFK05591.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [delta proteobacterium NaphS2] Length = 439 Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 44/120 (36%), Gaps = 14/120 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + ++ C +C +C + G + + +D Y+ I E+ G + Sbjct: 151 ISIMEGCNNFCSYCIVPYVRGRE--FFRAPEDILEEAEYLIS-EGIREITLLGQNVNSYV 207 Query: 159 HKR------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K+ +L L + H+ LRF + P+ + EL+ C K + IH Sbjct: 208 WKKNHNNWNFSSLLYELAELDHLLRLRFTTSH----PKDFSDELLACFAHIEK-LAGHIH 262 >gi|239820673|ref|YP_002947858.1| Radical SAM domain protein [Variovorax paradoxus S110] gi|239805526|gb|ACS22592.1| Radical SAM domain protein [Variovorax paradoxus S110] Length = 351 Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 45/218 (20%), Positives = 85/218 (38%), Gaps = 38/218 (17%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKRL 162 C V CRFC + S + A +A + + + +V+F G G+P L Sbjct: 105 GCAVGCRFCMTGR---DGLLRQVGSAEIIAQVALARMRRPVRKVVFMGMGEPA----HNL 157 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRI-NPELIQCLKEAGKP--VYIAIHAN----- 214 V++ + + V + + + +P + L++A + +++H Sbjct: 158 DNVMEAIELLGTVGN--IGHKNLVFS--TVGDPRAFERLQQARVRPALALSLHTTKAGLR 213 Query: 215 ------HPYEFSE-EAIAAISRLANA-GIILLSQSVLLKGINDDPE----ILANLMRTFV 262 P + E + A R A A G + Q LL G+ND PE I+ L F Sbjct: 214 KKLLPRAPN-MTPEELVGAGERYARATGYPIQYQWTLLDGVNDGPEEIDGIVRLLSGKFG 272 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 L + P + G + R ++E +++ +L ++ Sbjct: 273 VLNMIP---FNA--VEGVAFSRPSLERCEQMARTLHQR 305 >gi|18978436|ref|NP_579793.1| arylsulfatase regulatory protein, putative [Pyrococcus furiosus DSM 3638] gi|18894280|gb|AAL82188.1| arylsulfatase regulatory protein, putative [Pyrococcus furiosus DSM 3638] Length = 472 Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 9/126 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----VIFTGGD 153 L + + C + C +C+ ++ KG +L+ + E L + +Q + V F GG+ Sbjct: 93 LVMTYSCNLRCPYCYEGDI--KSKGGLLTREKIETILTFASAHAQGDKKPTISVSFYGGE 150 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL L+ K + L+ L +K + +R +S + + IN +++ + + I Sbjct: 151 PL-LNWKGCEYTLQRLEEMKENKEIRDYSAGFVTNGTLINEDIVDAINNYNV-YSMQITL 208 Query: 214 NHPYEF 219 + P E Sbjct: 209 DGPKEI 214 >gi|117926243|ref|YP_866860.1| radical SAM protein [Magnetococcus sp. MC-1] gi|117609999|gb|ABK45454.1| Radical SAM domain protein [Magnetococcus sp. MC-1] Length = 293 Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 6/85 (7%) Query: 97 ILLKLLHVCPV-YCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 ++L+ C V +C FC R K K+ E A V GD Sbjct: 18 LILQATIGCSVNHCTFCSMYRHKRFHIKPLPQLFKEIEHAA---SAWPTARRVFLADGDA 74 Query: 155 LILSHKRLQKVLKTLRY-IKHVQIL 178 L+L L+++L LR + +Q + Sbjct: 75 LVLPTDHLERILDHLRRHLPQLQRV 99 >gi|312879890|ref|ZP_07739690.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260] gi|310783181|gb|EFQ23579.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260] Length = 373 Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 27/150 (18%), Positives = 51/150 (34%), Gaps = 26/150 (17%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 ++ L C + CR C+ + +S ++ L V+ +GG+PL Sbjct: 30 VVWHLTDRCGLRCRHCY--AEATPEGERFVSLREGFRCLETFAAWGAP-AVLLSGGEPLE 86 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPI-VDPQRINPELIQCLKEAGKPVYIAIHANH 215 H R L+ + + + R++ + L + G Y+ + + Sbjct: 87 SPHGR--AFLERGAE--------LGLSLAVSTNGTRVDDSWAEALAKRG--AYVGVSLDG 134 Query: 216 PYEFSE----------EAIAAISRLANAGI 235 P E + A A + RL AG Sbjct: 135 PQEIHDSFRGVPGAWNAAAAGLERLKRAGA 164 >gi|319646743|ref|ZP_08000972.1| HemZ protein [Bacillus sp. BT1B_CT2] gi|317391331|gb|EFV72129.1| HemZ protein [Bacillus sp. BT1B_CT2] Length = 528 Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 15/159 (9%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EA 133 D + + + + + CP C +C + + S + Sbjct: 181 DRQLKAVPDLYELGQEVSIYIGIPFCPTKCAYCTFPAYAIRGQAGRVGSFLWGLHYEMQK 240 Query: 134 ALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQR 191 +++E I V F GG P ++ + + + + + R V+ +R + V P Sbjct: 241 IGEWLKENDVSITTVYFGGGTPTSITAEEMDLLYEEMHRSFPDVKNIREVT-VEAGRPDT 299 Query: 192 INPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 I E + LK+ + I P + E + AI R Sbjct: 300 ITEEKLAVLKKWNIDRISIN-----PQSYENETLKAIGR 333 >gi|92114198|ref|YP_574126.1| GTP cyclohydrolase subunit MoaA [Chromohalobacter salexigens DSM 3043] gi|91797288|gb|ABE59427.1| GTP cyclohydrolase subunit MoaA [Chromohalobacter salexigens DSM 3043] Length = 329 Score = 40.1 bits (93), Expect = 0.54, Method: Composition-based stats. Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 38/177 (21%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 RY + + + C C +C +M + VL+ ++ E E + ++ TG Sbjct: 13 RY---VRISVTDRCDFRCVYCMSEDMTFLPRAQVLTLEEIEQVARAFVE-LGVEKIRLTG 68 Query: 152 GDPLILSHKRLQKVLKTLRYIK----------------HVQILRF-HSRVPIVDPQRINP 194 G+PL+ + + ++ + + H + LR + + ++P Sbjct: 69 GEPLV--RRGIDDLVGRIGALPGLKDFAMTTNGAGLVKHAKALREGGLQRLNISIDSLDP 126 Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 E + L G E +A I +AG + +V+LKG NDD Sbjct: 127 ERFRQLTRTGN--------------LEHVVAGIRAARDAGFERIKLNAVMLKGRNDD 169 >gi|300694498|ref|YP_003750471.1| radical_sam domain [Ralstonia solanacearum PSI07] gi|299076535|emb|CBJ35860.1| conserved hypothethical protein, radical_SAM domain [Ralstonia solanacearum PSI07] Length = 398 Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 42/85 (49%), Gaps = 8/85 (9%) Query: 95 DRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIWE 146 ++ +LK++ C + C +C+ R + + V+S + + I E Q + Sbjct: 20 NQAILKVVQRCNLDCTYCYVYNRGDDSWKTRLPVISDRVIDKLAERINEHCARFALQSFT 79 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY 171 + GG+PL+L +R+++++ LR Sbjct: 80 IEIHGGEPLLLGKRRMREMVDRLRS 104 >gi|169335621|ref|ZP_02862814.1| hypothetical protein ANASTE_02041 [Anaerofustis stercorihominis DSM 17244] gi|169258359|gb|EDS72325.1| hypothetical protein ANASTE_02041 [Anaerofustis stercorihominis DSM 17244] Length = 448 Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 45/118 (38%), Gaps = 16/118 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154 LK+ C +C +C V S+ E ++ + + E+I D Sbjct: 153 AYLKVSEGCDKHCTYC-----VIPSIRGKQRSRKIEDIVSEAKRLADRGVKELILIAQDV 207 Query: 155 L-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + ++L ++L+ L I+ + +R V + P+ ++ ELI K + Sbjct: 208 GEYGTDLYGERKLPELLEELNKIESIHWIR----VLYIYPETVSDELIDKFVNLDKVL 261 >gi|218782945|ref|YP_002434263.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764329|gb|ACL06795.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01] Length = 334 Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats. Identities = 19/104 (18%), Positives = 45/104 (43%), Gaps = 13/104 (12%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + R+P I + + H C + C +C ++ + + + A+ + + + Sbjct: 18 LGRRFPASIGMIVTHRCNLRCAYCGFPDLPSDE----MDADQWLEAIHAFLQAGTLR-MG 72 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ-ILRFHSRVPIVDPQR 191 F+GG+PL L++ L L H + ++ ++ + P+R Sbjct: 73 FSGGEPL------LRQDLGRLLQAAHGKALITLNTNGLL-LPER 109 >gi|153853169|ref|ZP_01994578.1| hypothetical protein DORLON_00563 [Dorea longicatena DSM 13814] gi|149753955|gb|EDM63886.1| hypothetical protein DORLON_00563 [Dorea longicatena DSM 13814] Length = 481 Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats. Identities = 23/117 (19%), Positives = 53/117 (45%), Gaps = 19/117 (16%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLILSHKR 161 C +C +C + S+D EA ++ I++ + EV+ G + + K Sbjct: 198 GCNNFCSYC-----IVPYVRGRERSRDPEAIISEIRQLVADGVVEVMLLGQN-VNSYGKN 251 Query: 162 LQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 L+ +L+ + I+ ++ +RF + P+ ++ ELI+ + ++ K + +H Sbjct: 252 LEHPITFAQLLERIEQIEGLERIRFMTSH----PKDLSDELIEVMGKS-KKICKHLH 303 >gi|325299811|ref|YP_004259728.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides salanitronis DSM 18170] gi|324319364|gb|ADY37255.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides salanitronis DSM 18170] Length = 158 Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 25/59 (42%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C C+ C E G+ L+ K + ++ I+ + + F+GGDP S L Sbjct: 26 GCSHRCKGCHNPESWNPLAGSPLTDKVIDGMISQIKANPLLDGITFSGGDPFYHSEAFL 84 >gi|228470224|ref|ZP_04055131.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Porphyromonas uenonis 60-3] gi|228308175|gb|EEK17038.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Porphyromonas uenonis 60-3] Length = 156 Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 30/71 (42%), Gaps = 4/71 (5%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C +C C E GT L+ + + + I + + + +GGDP+ Sbjct: 25 GCSHHCPGCHNPESHSPLVGTPLTEEYLQQIIDEINDNPLLDGITLSGGDPMFSP----G 80 Query: 164 KVLKTLRYIKH 174 ++L L+ +KH Sbjct: 81 ELLTLLKRLKH 91 >gi|226939284|ref|YP_002794355.1| coproporphyrinogen III oxidase [Laribacter hongkongensis HLHK9] gi|226714208|gb|ACO73346.1| HemN [Laribacter hongkongensis HLHK9] Length = 470 Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 11/133 (8%) Query: 105 CPVYCRFCFRREMVGSQK---GTVLSSKDTEAAL--AYIQEKSQIWEVIFTGGDPLILSH 159 C C +C +++ K T L + E AL Y+Q Q+ ++ F GG P LS Sbjct: 74 CNTVCYYCACNKIITKDKSRADTYLDYLERELALHAEYLQGHPQLAQLHFGGGTPTFLSD 133 Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEF 219 ++ ++++ + H Q++ +DP+++ + ++ L G +F Sbjct: 134 AQMTRLMQAIGR--HFQLVPHGEYSIEIDPRKVTADNVKHLASLGFNRMSVG----VQDF 187 Query: 220 SEEAIAAISRLAN 232 + AA++R+ + Sbjct: 188 DPQVQAAVNRIQS 200 >gi|52784833|ref|YP_090662.1| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580] gi|163119326|ref|YP_078263.2| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580] gi|52347335|gb|AAU39969.1| HemZ [Bacillus licheniformis ATCC 14580] gi|145902832|gb|AAU22625.2| coproporphyrinogen III oxidase [Bacillus licheniformis ATCC 14580] Length = 502 Score = 40.1 bits (93), Expect = 0.55, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 55/159 (34%), Gaps = 15/159 (9%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT------EA 133 D + + + + + CP C +C + + S + Sbjct: 155 DRQLKAVPDLYELGQEVSIYIGIPFCPTKCAYCTFPAYAIRGQAGRVGSFLWGLHYEMQK 214 Query: 134 ALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQR 191 +++E I V F GG P ++ + + + + + R V+ +R + V P Sbjct: 215 IGEWLKENDVSITTVYFGGGTPTSITAEEMDLLYEEMHRSFPDVKNIREVT-VEAGRPDT 273 Query: 192 INPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 I E + LK+ + I P + E + AI R Sbjct: 274 ITEEKLAVLKKWNIDRISIN-----PQSYENETLKAIGR 307 >gi|310658888|ref|YP_003936609.1| radical sam-superfamily protein [Clostridium sticklandii DSM 519] gi|308825666|emb|CBH21704.1| Radical SAM-superfamily protein [Clostridium sticklandii] Length = 352 Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 40/118 (33%), Gaps = 14/118 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + CP C FC ++ + G D E +L I+ + I F G Sbjct: 8 IFIPHQGCPNDCVFCNQKRITGKGASIDFEEIKSDIEDSLKTIKPDTLIEIAFFGGS--F 65 Query: 156 ILSHKRLQKVLKTLR----YIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + LQ+ + + + +R +R P I+ E ++ LK + Sbjct: 66 TAINTELQRRCLEIANYYKSMDARICDIRISTR-----PDAISKEKLEFLKMYNVSII 118 >gi|290968070|ref|ZP_06559619.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L] gi|290781976|gb|EFD94555.1| radical SAM domain protein [Megasphaera genomosp. type_1 str. 28L] Length = 295 Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 8/116 (6%) Query: 98 LLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAY-IQEKSQIWEVIFTGGDPL 155 +L++ C C FC M + S + + + + + + GD L Sbjct: 21 ILRVTIGCSHNRCTFCS---MYKDSSYRIRSLAEIDGIIERGARAMPYVRRIFLADGDAL 77 Query: 156 ILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 +L L +LK + R + D R PE +Q LK+AG + Sbjct: 78 VLPTASLLHILKKCYDTFPQIT--RIGAYATPNDINRKTPEELQALKDAGLDILYM 131 >gi|291280509|ref|YP_003497344.1| molybdenum cofactor biosynthesis protein A [Deferribacter desulfuricans SSM1] gi|290755211|dbj|BAI81588.1| molybdenum cofactor biosynthesis protein A [Deferribacter desulfuricans SSM1] Length = 329 Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 21/111 (18%), Positives = 45/111 (40%), Gaps = 17/111 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C C++C + +LS +D + + E I ++ TGG+PL+ Sbjct: 18 ISVTDRCNFRCKYCMPQHNFKMLSHSDILSYEDIIFVVKTLTE-VGIEKIRITGGEPLV- 75 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 K + + + L +K+++ L + LK+ GK ++ Sbjct: 76 -RKNINYLFERLGGLKNIKDLTLTTNG-------------SLLKKYGKTIF 112 >gi|270296162|ref|ZP_06202362.1| cfr family radical SAM enzyme [Bacteroides sp. D20] gi|317480739|ref|ZP_07939825.1| cfr family radical SAM enzyme [Bacteroides sp. 4_1_36] gi|270273566|gb|EFA19428.1| cfr family radical SAM enzyme [Bacteroides sp. D20] gi|316903080|gb|EFV24948.1| cfr family radical SAM enzyme [Bacteroides sp. 4_1_36] Length = 346 Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 46/200 (23%) Query: 95 DRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG 151 DR L + C + C+FC M G Q T L+S ++ + E+ ++ V+ G Sbjct: 100 DRATLCVSSQVGCKMNCKFC----MTGKQGFTANLTSNQIINQISSLPERDKLTNVVMMG 155 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEA 203 G+PL L +VLK L + S P+R+ L + + E+ Sbjct: 156 MGEPL----DNLDEVLKALEIMT-------ASYGYAWSPKRVTLSSVGLKKGLQRFIGES 204 Query: 204 GKPVYIAIHANHP---YEFSEEAIA-AISRLANAGIILLS-----Q-------SVLLKGI 247 + I++H+ P E A +I+ + +L + Q V KG+ Sbjct: 205 DCHLAISLHSPIPLQRRELMPAEKAFSITEIVE---LLRNYDFSKQRRLSFEYIVF-KGV 260 Query: 248 NDDPEILANLMRTFVELRIK 267 ND L++ L + Sbjct: 261 NDSLPYAKELLKLLRGLDCR 280 >gi|160892219|ref|ZP_02073222.1| hypothetical protein BACUNI_04683 [Bacteroides uniformis ATCC 8492] gi|156858697|gb|EDO52128.1| hypothetical protein BACUNI_04683 [Bacteroides uniformis ATCC 8492] Length = 350 Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 44/200 (22%), Positives = 76/200 (38%), Gaps = 46/200 (23%) Query: 95 DRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG 151 DR L + C + C+FC M G Q T L+S ++ + E+ ++ V+ G Sbjct: 104 DRATLCVSSQVGCKMNCKFC----MTGKQGFTANLTSNQIINQISSLPERDKLTNVVMMG 159 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEA 203 G+PL L +VLK L + S P+R+ L + + E+ Sbjct: 160 MGEPL----DNLDEVLKALEIMT-------ASYGYAWSPKRVTLSSVGLKKGLQRFIGES 208 Query: 204 GKPVYIAIHANHP---YEFSEEAIA-AISRLANAGIILLS-----Q-------SVLLKGI 247 + I++H+ P E A +I+ + +L + Q V KG+ Sbjct: 209 DCHLAISLHSPIPLQRRELMPAEKAFSITEIVE---LLRNYDFSKQRRLSFEYIVF-KGV 264 Query: 248 NDDPEILANLMRTFVELRIK 267 ND L++ L + Sbjct: 265 NDSLPYAKELLKLLRGLDCR 284 >gi|312897930|ref|ZP_07757343.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Megasphaera micronuciformis F0359] gi|310620964|gb|EFQ04511.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Megasphaera micronuciformis F0359] Length = 167 Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 11/77 (14%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C +C CF E + GT+ + K+T+ ++Y++E I + GG+P+ + Sbjct: 24 TGCTHHCYNCFNEEYQNPEFGTLWTDKETDQVISYLKE-PTISGLTLLGGEPMQNTDGL- 81 Query: 163 QKVLKTLRYIKHVQILR 179 I ++ +R Sbjct: 82 ---------IPVIRRVR 89 >gi|303234163|ref|ZP_07320809.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Finegoldia magna BVS033A4] gi|302494704|gb|EFL54464.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Finegoldia magna BVS033A4] Length = 166 Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 3/76 (3%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R + C + C+ CF +E G + T + Y+ + +I + GG+P Sbjct: 18 RCTFFVTG-CSLNCKNCFNKEYQDPNFGEKWTDTQTNQIIDYL-NQEEIDGLTILGGEPF 75 Query: 156 ILSHKRLQKVLKTLRY 171 L ++++ +R Sbjct: 76 ESCDD-LIEIVEKIRE 90 >gi|253568256|ref|ZP_04845667.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251842329|gb|EES70409.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 306 Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 71/227 (31%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + S ++ + Y+ + E+ + Sbjct: 8 AYLKISEGCDRKCSYCAIPIITG--RHISKSMEEILDEVRYLVSQGVKEFQVIAQELTYY 65 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G D + + L ++++ + I V+ +R H P +L + ++E Sbjct: 66 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 114 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 + L+ I+D+ + LMR Sbjct: 115 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 137 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316 ++ E+ K++ ++++ G+ + ++ PG Sbjct: 138 --------------VSKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGE 170 >gi|229105357|ref|ZP_04236004.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock3-28] gi|228678069|gb|EEL32299.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock3-28] Length = 339 Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 29/167 (17%), Positives = 59/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LK+AG Sbjct: 79 PLLRKD--LTKLIARLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKKAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ +G+ND Sbjct: 131 AIDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKQGMNDH 177 >gi|237653116|ref|YP_002889430.1| molybdenum cofactor biosynthesis protein A [Thauera sp. MZ1T] gi|237624363|gb|ACR01053.1| molybdenum cofactor biosynthesis protein A [Thauera sp. MZ1T] Length = 359 Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 47/113 (41%), Gaps = 15/113 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C RE+ G + +LS ++ + + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPREVFGDDYAFLPRRQLLSFEEILRVARLFVAR-GVRKIRITGGE 99 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 PL+ + +++ L + V+ + + + P+L + LK+AG Sbjct: 100 PLLRKD--VDRLIGMLAALDGVE-VTLTTNGV------LLPKLARRLKDAGLH 143 >gi|154499609|ref|ZP_02037647.1| hypothetical protein BACCAP_03265 [Bacteroides capillosus ATCC 29799] gi|150271687|gb|EDM98931.1| hypothetical protein BACCAP_03265 [Bacteroides capillosus ATCC 29799] Length = 205 Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 42/105 (40%), Gaps = 15/105 (14%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--------EAALAYIQE 140 I + Y + + L + C C FC R KG++ + EA +++ Sbjct: 4 ITYEYEGGLYVNLTNRCDCACVFCLRH---NGHKGSIYADDLWLDHEPTREEALDDFLRR 60 Query: 141 K-SQIWEVIFTG-GDPLILSHKRLQKVLKTL-RYIKHVQILRFHS 182 + E++F G G+P+ + ++ L ++ +R ++ Sbjct: 61 DLTSYREIVFCGFGEPMY-RWDDIAWLIDALKARCPNLPPVRINT 104 >gi|153808740|ref|ZP_01961408.1| hypothetical protein BACCAC_03039 [Bacteroides caccae ATCC 43185] gi|149128566|gb|EDM19784.1| hypothetical protein BACCAC_03039 [Bacteroides caccae ATCC 43185] Length = 439 Score = 40.1 bits (93), Expect = 0.56, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 53/137 (38%), Gaps = 8/137 (5%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C G + ++S +A A + +I GD Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASMVEQAGQAAAEGGKEIVLTGVNIGD 207 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + + ++K L ++ ++ R S ++P + E+I+ + + H Sbjct: 208 FGKTTGETFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSRSR---SFMPHF 260 Query: 214 NHP-YEFSEEAIAAISR 229 + P S+E + + R Sbjct: 261 HIPLQSGSDEVLKLMRR 277 >gi|319901401|ref|YP_004161129.1| 23S rRNA m(2)A-2503 methyltransferase [Bacteroides helcogenes P 36-108] gi|319416432|gb|ADV43543.1| 23S rRNA m(2)A-2503 methyltransferase [Bacteroides helcogenes P 36-108] Length = 346 Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 47/203 (23%), Positives = 79/203 (38%), Gaps = 50/203 (24%) Query: 94 PDRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFT 150 DR L + C + C+FC M G Q T L++ ++ + E+ ++ V+ Sbjct: 99 DDRATLCVSSQVGCKMNCKFC----MTGKQGFTANLTANQIINQISSLPERDKLTNVVMM 154 Query: 151 G-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKE 202 G G+PL L +VLK L + S P+RI L + ++E Sbjct: 155 GMGEPL----DNLDEVLKALEVMT-------ASYGYSWSPKRITLSSVGLRKGLQRFIEE 203 Query: 203 AGKPVYIAIHANHP---YEFSEEAIA-AISRLANAGIILLS-----Q-------SVLLKG 246 + + I++H P E A +I+ + +L + Q V KG Sbjct: 204 SDCHLAISLHTPVPLQRRELMPAEKAFSITEIVE---LLRNYDFSKQRRLSFEYIVF-KG 259 Query: 247 INDD---PEILANLMRTFVELRI 266 +ND + L L+R + RI Sbjct: 260 VNDSLLYAKELLKLLRGL-DCRI 281 >gi|306816147|ref|ZP_07450285.1| coproporphyrinogen III oxidase [Escherichia coli NC101] gi|305850543|gb|EFM51000.1| coproporphyrinogen III oxidase [Escherichia coli NC101] Length = 445 Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 34/165 (20%), Positives = 63/165 (38%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ TLR + + RV D +RI+ Sbjct: 120 TPSALSAHDLTRIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|300710670|ref|YP_003736484.1| MiaB-like tRNA modifying enzyme [Halalkalicoccus jeotgali B3] gi|299124353|gb|ADJ14692.1| MiaB-like tRNA modifying enzyme [Halalkalicoccus jeotgali B3] Length = 414 Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 39/112 (34%), Gaps = 8/112 (7%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 +L + C C +C + G + + E A A + + E+ TG D + Sbjct: 124 ILPIARGCMSNCSYCITKHATGRVDSPTI-EANVEKARALV--HAGAKELRITGQDTGVY 180 Query: 158 SHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L ++L + I+ +R P I+ EL + E K Sbjct: 181 GWDDGERSLPELLSRICAIEGEFRVRLGMANPGGI-HGIHEELAEVFAENEK 231 >gi|304317725|ref|YP_003852870.1| radical SAM protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302779227|gb|ADL69786.1| Radical SAM domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 416 Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 +++ + + C + C +C +K +LS+ D + A+ I + EV+ +GG+PL Sbjct: 95 KVVFSITNRCNLSCEYCCVDADNYLKKDDILSTSDIKRAIDKILKLK-PQEVVISGGEPL 153 Query: 156 I 156 + Sbjct: 154 V 154 >gi|255020721|ref|ZP_05292781.1| tRNA-i(6)A37 methylthiotransferase [Acidithiobacillus caldus ATCC 51756] gi|254969837|gb|EET27339.1| tRNA-i(6)A37 methylthiotransferase [Acidithiobacillus caldus ATCC 51756] Length = 437 Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 38/126 (30%), Gaps = 21/126 (16%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGD 153 + + C +C FC G + + ++ + + EV G + Sbjct: 136 TAFVTVQEGCDKFCTFCVVPHTRGREFSRPMPDILREVRQLVD-----QGVREVTLLGQN 190 Query: 154 P-------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 ++ L ++L+ L I + LR+ + P R + Sbjct: 191 VNAYRGATGLIGEGDLAELLERLARIPDLLRLRYTTSHPNNLDDR-------LIAAHRDI 243 Query: 207 VYIAIH 212 +A H Sbjct: 244 PILAAH 249 >gi|212694739|ref|ZP_03302867.1| hypothetical protein BACDOR_04271 [Bacteroides dorei DSM 17855] gi|237710987|ref|ZP_04541468.1| radical SAM domain-containing protein [Bacteroides sp. 9_1_42FAA] gi|212662718|gb|EEB23292.1| hypothetical protein BACDOR_04271 [Bacteroides dorei DSM 17855] gi|229454831|gb|EEO60552.1| radical SAM domain-containing protein [Bacteroides sp. 9_1_42FAA] Length = 368 Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 54/160 (33%), Gaps = 22/160 (13%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 R P +L C + C CF R V + G + + +Q+ ++ + Sbjct: 20 QSRVPITTNFELTPTCTLNCDMCFIRTERSVVERHGGLSPLQQWLDWAEQLQDMGTLF-I 78 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + TGG+P++ +++ LR + + L + I+ E+++ L+ Sbjct: 79 LLTGGEPMLYP--HFKELYTRLREMGFILTL-------NTNGTLIDNEMVRILQTHKPRR 129 Query: 208 YIAIHANHPYEFSEEAI----------AAISRLANAGIIL 237 E A+ RL A I + Sbjct: 130 INVTLYGDSRETYGRLCHNPQGYTLCMEALKRLKKADIDV 169 >gi|126653928|ref|ZP_01725772.1| hypothetical protein BB14905_00445 [Bacillus sp. B14905] gi|126589588|gb|EAZ83728.1| hypothetical protein BB14905_00445 [Bacillus sp. B14905] Length = 370 Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 ++C + C C + ++ L + L + E + + TGG+P ++S Sbjct: 33 FTTTNLCNMRCAHCAVGYTLQNKDPEALP---IDLILRRLDEIPHLKTLSITGGEP-MMS 88 Query: 159 HKRLQKVLKTLRYIKHVQILR 179 K +Q + L H + +R Sbjct: 89 KKSVQNYVLPLLKYAHERGVR 109 >gi|256827640|ref|YP_003151599.1| putative Fe-S oxidoreductase [Cryptobacterium curtum DSM 15641] gi|256583783|gb|ACU94917.1| predicted Fe-S oxidoreductase [Cryptobacterium curtum DSM 15641] Length = 561 Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 29/182 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTG 151 P + ++ C + C C GS G + E A I + + I +I TG Sbjct: 140 PRIVAWEITRSCNLSCAHCRAAAEFGSYAGEL----SLEQCKAVIDDIATITNPILIITG 195 Query: 152 GDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208 G+P + + + + V + IV E+ + E G + + Sbjct: 196 GEPFMRPDIWDIIDYARER-GCMPVV-----GTNGTIV-----TEEIAHKMAEHGIRRMS 244 Query: 209 IAIHANHPYEFSE---------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 +++ E EAI I AG+ + + K + E + +L + Sbjct: 245 VSLDFPTAAEHDGFRGQQGSFNEAIRGIRLAQQAGVGVQINMTVTKKNAERMEEMHDLSQ 304 Query: 260 TF 261 Sbjct: 305 QL 306 >gi|114567375|ref|YP_754529.1| molybdenum cofactor biosynthesis protein A [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|122317679|sp|Q0AVU6|MOAA_SYNWW RecName: Full=Molybdenum cofactor biosynthesis protein A gi|114338310|gb|ABI69158.1| GTP cyclohydrolase subunit MoaA [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 326 Score = 40.1 bits (93), Expect = 0.57, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 58/170 (34%), Gaps = 34/170 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA--LAYIQEKSQIWEVIFTGGDPLI 156 + L C + CR+C G T S E L I + I ++ TGG+PL+ Sbjct: 14 ISLTDRCNLRCRYC--MPETGVDNLTHYSILSLEEMARLVRIASELGIQKIRLTGGEPLV 71 Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHAN 214 + +L + + I + + + + L + LK AG + ++ Sbjct: 72 RRNVPQLISYIAQIPRIDDIALTTNGT---------LFAALAEELKTAGLNRINFSL--- 119 Query: 215 HPYEFSEE-------------AIAAISRLANAGI-ILLSQSVLLKGINDD 250 E AI + + + V+++G NDD Sbjct: 120 --DSLVPEKFKYITRRGDLSKVKEAIFKALELDMHPVKINMVVIRGFNDD 167 >gi|303326380|ref|ZP_07356823.1| radical SAM domain protein [Desulfovibrio sp. 3_1_syn3] gi|302864296|gb|EFL87227.1| radical SAM domain protein [Desulfovibrio sp. 3_1_syn3] Length = 391 Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 19/112 (16%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154 + ++ C + C+ C G + + + A A I Q+ +IFTGGDP Sbjct: 48 VAWEVTRSCNLACKHCRAEAHPEPYPGELST----DEAKALIDTFPQVGNPIIIFTGGDP 103 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAG 204 ++ + L H + L P I PE + +KEAG Sbjct: 104 MMRPD------VYELVAYTHAKGLTC-----AFSPNGTLITPESARRIKEAG 144 >gi|257462828|ref|ZP_05627234.1| Fe-S oxidoreductase [Fusobacterium sp. D12] gi|317060457|ref|ZP_07924942.1| Fe-S oxidoreductase [Fusobacterium sp. D12] gi|313686133|gb|EFS22968.1| Fe-S oxidoreductase [Fusobacterium sp. D12] Length = 436 Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 21/140 (15%), Positives = 48/140 (34%), Gaps = 15/140 (10%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152 R +K+ C +C +C G + ++ + L ++ +I + G Sbjct: 145 TRAYVKIQDGCNEFCSYCKIPFARGRSRSRRPEKVLEEIDKLL--VEGFREIILIGINLG 202 Query: 153 DPLI-LSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI- 209 D L + + +++ + +Q +R S V P RI + P + Sbjct: 203 DYGKDLKEEINFEDLVRNILKKDLLQRVRIGS----VYPDRITESFMTLF---DHPKMMP 255 Query: 210 AIHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 256 HLHIS-LQSCDDTVLRNMRR 274 >gi|322418737|ref|YP_004197960.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M18] gi|320125124|gb|ADW12684.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M18] Length = 326 Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 30/167 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C + V + +LS ++ + + I ++ TGG+PL+ Sbjct: 16 LSVTDRCNMRCCYCMPAQGVAKLEHKEMLSYEELFKVASACVAQ-GIEKIRVTGGEPLV- 73 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216 + L L L + ++ L + EL L+EAG + I++ Sbjct: 74 -RRGLVDFLARLSRVPGLKELVLTTNGLQ------LEELALPLREAGVARLNISL----- 121 Query: 217 YEFSEEAIAAISRLAN-----AGI---------ILLSQSVLLKGIND 249 E A I+R A+ AGI L V+++G+ND Sbjct: 122 DSLQPETFARITRGADLNKVLAGIDAAQKAGFGPLKINMVVMRGVND 168 >gi|160947755|ref|ZP_02094922.1| hypothetical protein PEPMIC_01690 [Parvimonas micra ATCC 33270] gi|158446889|gb|EDP23884.1| hypothetical protein PEPMIC_01690 [Parvimonas micra ATCC 33270] Length = 443 Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 38/96 (39%), Gaps = 12/96 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R +K+ C ++C +C G K + E A+ + EVI TG Sbjct: 149 KTRAYIKIQEGCNMFCTYCIIPYARGPIKSRPI-DDIYEEAVK--LANNGYKEVIITGIH 205 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 D + + RL V++ L I+++ +R S Sbjct: 206 VGSYGLD--LGNDTRLIDVIEKLSTIENLDRIRLSS 239 >gi|325275801|ref|ZP_08141670.1| molybdenum cofactor synthesis domain-containing protein [Pseudomonas sp. TJI-51] gi|324099072|gb|EGB97049.1| molybdenum cofactor synthesis domain-containing protein [Pseudomonas sp. TJI-51] Length = 322 Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 64/160 (40%), Gaps = 20/160 (12%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C +C + +V +Q LS+ +AY+ E + I + TGG+PL+ Sbjct: 15 VSLTAACNYACTYCVPDGKRLVAAQDE--LSADALARGVAYLIEAAGIERLRITGGEPLV 72 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 RL L + + ++ + + Q + +L Q + + +++ P Sbjct: 73 SP--RLDAFLAAVAKLG-LEDI-----SLTTNGQMLGRKLPQLQAAGIRRLNVSLDTLDP 124 Query: 217 YEFSEEAI--------AAISRLANAGIILLSQSVLLKGIN 248 F + A AA+ R G+ + V ++G N Sbjct: 125 LAFRQIARGGDLATVLAAMERARAMGMQIKVNMVPMRGQN 164 >gi|293402175|ref|ZP_06646313.1| 2-methylthioadenine synthetase [Erysipelotrichaceae bacterium 5_2_54FAA] gi|291304282|gb|EFE45533.1| 2-methylthioadenine synthetase [Erysipelotrichaceae bacterium 5_2_54FAA] Length = 433 Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 30/171 (17%) Query: 66 ELNILPEEREDP-IGDNNHSPLKG-----------IVHRYPDRILLKLLHVCPVYCRFCF 113 E++ + RE P + + HS L G +V P LK+ C C +C Sbjct: 94 EIDAVISIREYPHLHEILHSLLDGKELVSYGKSERMVSSKPWTAYLKIAEGCSNRCTYCA 153 Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP------LILSHKRLQKVLK 167 ++ T + + A + + E++ D L L+ +L+ Sbjct: 154 I-PLIRGDNVTFPMEQLVQEAKE--LAQRGVKELVLIAQDTTKYGVDLYGKRSLLE-LLQ 209 Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----YIAIHAN 214 L I +R + P I+ +LI+ + + K + HAN Sbjct: 210 KLHEIDGFHWIRI----LYMYPDEIDEDLIEGMAKLPKVLPYFDIPMQHAN 256 >gi|189219894|ref|YP_001940535.1| Molybdenum cofactor biosynthesis enzyme [Methylacidiphilum infernorum V4] gi|189186752|gb|ACD83937.1| Molybdenum cofactor biosynthesis enzyme [Methylacidiphilum infernorum V4] Length = 337 Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 14/158 (8%) Query: 99 LKLLHVCPVYCRFCFRREM-VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C C +CF +++ S+K + LS ++ A + + K + TGG+PL+ Sbjct: 26 ISVTDRCNERCIYCFPQDLGFLSKKDSQLSFEELYAVVFHGAMKHGFRDFRITGGEPLV- 84 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSR-VPIVDPQRINPELIQCLKEAGKPVYIAI-HANH 215 L ++ L + +R + + R EL + + AG V + + Sbjct: 85 RKGTLA-FIRRLTRTPGISSVRLSTNGTLLGYYAR---ELKEA-QIAGINVSLDTLKPSL 139 Query: 216 PYEFSE----EAIAAISRLANAGI-ILLSQSVLLKGIN 248 + + + I GI + +VLLKGIN Sbjct: 140 YKKITGGDIVPVLEGIEECRKVGIEPIKLNTVLLKGIN 177 >gi|20807824|ref|NP_622995.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis MB4] gi|81481565|sp|Q8RA52|RIMO_THETN RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|20516384|gb|AAM24599.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis MB4] Length = 436 Score = 40.1 bits (93), Expect = 0.58, Method: Composition-based stats. Identities = 39/175 (22%), Positives = 63/175 (36%), Gaps = 30/175 (17%) Query: 59 QFIPQKEELN----ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 Q + EE+ +L D + D + I+ P LK+ C C FC Sbjct: 107 QIVDVIEEVKKGKKVLKYGHPDLLNDEG---IPRILTTPPYYAYLKIAEGCSNACSFCII 163 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP----------LILSHKRLQK 164 ++ G K + E A + + E+I D L+L + Sbjct: 164 PKLRGKYKSRKM-ENIIEEAQE--LARKGVKELIIIAQDTTKYGIDLYKKLMLP-----Q 215 Query: 165 VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYE 218 +L+ L I+ ++ +R P + ELI+ +K K V YI I H E Sbjct: 216 LLRELSKIEELKWIRL----LYAYPDSVTDELIEEIKNNQKIVKYIDIPLQHSSE 266 >gi|300704632|ref|YP_003746235.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum CFBP2957] gi|299072296|emb|CBJ43629.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum CFBP2957] Length = 373 Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 7/77 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +++ +LS ++ E + E + ++ TGG+ Sbjct: 48 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 106 Query: 154 PLILSH-KRLQKVLKTL 169 PL+ +RL ++L L Sbjct: 107 PLLRKDIERLVEMLARL 123 >gi|224368087|ref|YP_002602250.1| NifB2 [Desulfobacterium autotrophicum HRM2] gi|223690803|gb|ACN14086.1| NifB2 [Desulfobacterium autotrophicum HRM2] Length = 424 Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 48/253 (18%), Positives = 88/253 (34%), Gaps = 65/253 (25%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQE----KSQIWEVI 148 R+ L + C + C FC R+ ++ + S A+ Y+++ K I V Sbjct: 18 GRVHLPVAPRCNIQCNFCNRKFDCVNESRPGVCSSILSPFQAMEYLKQVVNRKKNISVVG 77 Query: 149 FTG-GDPLILSHKRLQ------------------------KVLKTLRY--IKHVQILRFH 181 G GDP + L + L + + HV I Sbjct: 78 IAGPGDPFANPEQTLTTIEMISKKYPDMLLCLASNGLNLPEYLDDIARFNVSHVSI---- 133 Query: 182 SRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE----FSEEAIAAISRLANAGIIL 237 I+ ++ ++ K + P + E+ +A+++ L GII+ Sbjct: 134 --TINAIDLAISEKIYSWVRFGKKSLA-------PGQGVKLLLEKQLASVAGLKERGIIV 184 Query: 238 LSQSVLLKGINDD-----PEILANLMRTFVELRIKPYYLHHPDLAAGT--SHFRLTI-EE 289 +++L GIND + +A + + PYY G+ +H R EE Sbjct: 185 KVNTIVLPGINDHHVTDIAKEMAKMGVDLL--NCMPYY-----PNEGSNFAHLREPSREE 237 Query: 290 GQKIVASLKEKIS 302 KI A ++ + Sbjct: 238 IAKIQADAQKYLP 250 >gi|213023904|ref|ZP_03338351.1| hypothetical protein Salmonelentericaenterica_15757 [Salmonella enterica subsp. enterica serovar Typhi str. 404ty] Length = 30 Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 6/26 (23%), Positives = 10/26 (38%) Query: 300 KISGLCQPFYILDLPGGYGKVKIDTH 325 +SG P ++ G K +D Sbjct: 1 MVSGYMVPRLAREIGGEPSKTPLDLQ 26 >gi|150390794|ref|YP_001320843.1| RNA modification protein [Alkaliphilus metalliredigens QYMF] gi|149950656|gb|ABR49184.1| RNA modification enzyme, MiaB family [Alkaliphilus metalliredigens QYMF] Length = 433 Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 42/125 (33%), Gaps = 15/125 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C YC +C G + + + + EV+ TG Sbjct: 141 KTRAFLKIQEGCNQYCAYCIIPYARGPIRSR--GKIEIIQEVQTLVNN-GFKEVVLTGIH 197 Query: 154 PLI----LSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 L L VLK + I+ ++ +R S ++P + + L + K Sbjct: 198 VASYGKDLGDHEGLLDVLKRVNAIEGLERIRLSS----LEPTLFSDAFLSALSKLEK--- 250 Query: 209 IAIHA 213 I H Sbjct: 251 ICDHF 255 >gi|289661642|ref|ZP_06483223.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 343 Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 62/187 (33%), Gaps = 32/187 (17%) Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125 LP+ P+ D PL+ + L ++ C C +C + V G Sbjct: 6 LPDLLTAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGFDSQQR 57 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS--- 182 LS E + + +V TGG+PL+ L ++ L I+ ++ L + Sbjct: 58 LSFDQLETLVRAFVS-VGVTKVRLTGGEPLLRRD--LPSLIARLSAIEGIEDLALTTNGT 114 Query: 183 ---RVPIVDPQ----RIN-------PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 R + Q RI P L + + + + E + I+ Sbjct: 115 LLARQAVALRQAGLRRITVSMDALEPALFRRMSGDRGEIAQVLAGIAAAELAGFQRLKIN 174 Query: 229 RLANAGI 235 + GI Sbjct: 175 CVVQRGI 181 >gi|326317352|ref|YP_004235024.1| molybdenum cofactor biosynthesis protein A [Acidovorax avenae subsp. avenae ATCC 19860] gi|323374188|gb|ADX46457.1| molybdenum cofactor biosynthesis protein A [Acidovorax avenae subsp. avenae ATCC 19860] Length = 386 Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G G +LS ++ + ++ TGG+ Sbjct: 51 ISVTDRCNFRCSYCMPKEVFGKDYPYLSHGDLLSFEEISRLARVFLAH-GVRKIRLTGGE 109 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ + L+ +++ L + Sbjct: 110 PLL--RRHLENLVEQLAGL 126 >gi|227827329|ref|YP_002829108.1| radical SAM protein [Sulfolobus islandicus M.14.25] gi|229584545|ref|YP_002843046.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27] gi|227459124|gb|ACP37810.1| Radical SAM domain protein [Sulfolobus islandicus M.14.25] gi|228019594|gb|ACP55001.1| Radical SAM domain protein [Sulfolobus islandicus M.16.27] Length = 350 Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 56/119 (47%), Gaps = 12/119 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + ++ CP+ C+ C R + + L+++++ L I ++ ++FTGGD Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPSELNTEESRKLLEDIARFGKV-VIVFTGGD 64 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211 PL S + ++++ + + V + P P R++ E ++ + + + I++ Sbjct: 65 PLSRSD--IFELMEYAKSLGLVVSI-----AP--SPSHRLDDETMKMISNYARYMSISL 114 >gi|212638682|ref|YP_002315202.1| 2-methylthioadenine synthetase [Anoxybacillus flavithermus WK1] gi|212560162|gb|ACJ33217.1| 2-methylthioadenine synthetase [Anoxybacillus flavithermus WK1] Length = 467 Score = 40.1 bits (93), Expect = 0.59, Method: Composition-based stats. Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 11/124 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150 R LK+ C +C FC G + + + + +I I T Sbjct: 159 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIRQAQQLVD--AGYKEIVLTGIHT 216 Query: 151 GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GG + +L+ + +K ++ LR S ++ +I E+I L+++ K + Sbjct: 217 GGYGEDMKDYNFAMLLRDMDEQVKGLKRLRISS----IEASQITDEVIDVLRQSDK-IVR 271 Query: 210 AIHA 213 +H Sbjct: 272 HLHI 275 >gi|322418241|ref|YP_004197464.1| Radical SAM domain-containing protein [Geobacter sp. M18] gi|320124628|gb|ADW12188.1| Radical SAM domain protein [Geobacter sp. M18] Length = 506 Score = 39.7 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 4/75 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C +CF + + LS+ + L + I +V +GGDPL Sbjct: 144 LMFSNDCHTNCAYCFAKGHCVPESKQ-LSTGRWKELLRE-AKSLGIEQVTLSGGDPLFRK 201 Query: 159 HKRLQKVLKTLRYIK 173 K+++ L + Sbjct: 202 DAL--KLIEELIDLD 214 >gi|83748466|ref|ZP_00945488.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum UW551] gi|83724877|gb|EAP72033.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum UW551] Length = 373 Score = 39.7 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 7/77 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +++ +LS ++ E + E + ++ TGG+ Sbjct: 48 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 106 Query: 154 PLILSH-KRLQKVLKTL 169 PL+ +RL ++L L Sbjct: 107 PLLRKDIERLVEMLARL 123 >gi|303239306|ref|ZP_07325834.1| protein of unknown function DUF512 [Acetivibrio cellulolyticus CD2] gi|302593092|gb|EFL62812.1| protein of unknown function DUF512 [Acetivibrio cellulolyticus CD2] Length = 440 Score = 39.7 bits (92), Expect = 0.60, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 51/157 (32%), Gaps = 38/157 (24%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C C FCF ++ + T+ D ++ + +S + Sbjct: 89 SCMNKCIFCFIDQLPKGMRDTLYFKDDDSRLSFFMGNYVTLT----------NMSFDDID 138 Query: 164 KVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 +++K + I + H+ ++ L K + + Sbjct: 139 RIIKYRMSPI----NVSVHT----------TNPDLRVLMLKNKN-------------AGD 171 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 + I +L + GI + Q VL GIND E+ ++ Sbjct: 172 VMLKIQKLIDGGIEVNCQIVLCAGINDGEELDRSISE 208 >gi|315608919|ref|ZP_07883891.1| RNA modification enzyme [Prevotella buccae ATCC 33574] gi|315249299|gb|EFU29316.1| RNA modification enzyme [Prevotella buccae ATCC 33574] Length = 434 Score = 39.7 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 37/202 (18%), Positives = 71/202 (35%), Gaps = 43/202 (21%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---------IWEV 147 LK+ C +C +C M G + + L ++E E+ Sbjct: 138 AYLKIAEGCDRHCAYCAIPLMTGRHVSRPM-----DEILDEVRELVAGGVKEFQVIAQEL 192 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--- 204 + G D + H + +++ + I V+ +R H P P +L+ ++E Sbjct: 193 TYYGID--LDGHHHIAELISRMADIPGVKWIRLHYAYPNQFPM----DLLDVMRERPNVC 246 Query: 205 --KPVYIAIHAN-------HPYEFSEEAIAAISRLANA--GIILLSQSVLLKGI----ND 249 + + H + H + +E + I ++ A GI + + LL G D Sbjct: 247 RYLDIALQ-HISDHILSRMHRHVTKQETVELIRKMREAVPGIHIR--TTLLVGFPGETED 303 Query: 250 DPEILANLMR--TFVELRIKPY 269 D L + +R F + Y Sbjct: 304 DFRQLVDFVREARFERMGAFAY 325 >gi|326203328|ref|ZP_08193193.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782] gi|325986586|gb|EGD47417.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782] Length = 468 Score = 39.7 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 45/110 (40%), Gaps = 22/110 (20%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVG--SQKGTVLSSKDTEAALAYIQEK-SQIW 145 + HR ++L++ C + C +C G ++ + + ++ Y+ + ++I Sbjct: 79 LEHR-VQFLILQVTQSCNLRCDYCTYSGQYNTRGHSGKSMTWELAKKSIDYLYQHSNEIE 137 Query: 146 EVIFT--GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 +V + GG+PL L ++K ++ ++ P RI Sbjct: 138 KVRISFYGGEPL-LEIDLIKKCVEYVKE---------------TYPHRIT 171 >gi|255691410|ref|ZP_05415085.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565] gi|260623056|gb|EEX45927.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565] Length = 439 Score = 39.7 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C G + ++S E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + +++ L I+ ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKTTGETFFDLVQALDQIEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|320353886|ref|YP_004195225.1| Radical SAM domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122388|gb|ADW17934.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032] Length = 289 Score = 39.7 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 48/122 (39%), Gaps = 14/122 (11%) Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFTGG 152 + ILL++ C C FC M Q+ ++ S A + Y + G Sbjct: 15 NSILLQVTTGCSHNKCTFCG---MYKGQRFSIKSDDIIFADIDYASNYFSFARRLFLCDG 71 Query: 153 DPLILSHKRLQKVLKTLR-YIKHVQILRF--HSRVPIVDPQRI-NPELIQCLKEAGKPVY 208 D LI+ +RL +L+ + + V + +S+ R+ E ++ L++ G + Sbjct: 72 DALIVPQQRLLAILQRIETRLPQVTRVGIYANSKSL-----RLKTVEELRQLRQHGLGIV 126 Query: 209 IA 210 Sbjct: 127 YM 128 >gi|310643623|ref|YP_003948381.1| arylsulfatase regulator (fe-s oxidoreductase) [Paenibacillus polymyxa SC2] gi|309248573|gb|ADO58140.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Paenibacillus polymyxa SC2] Length = 442 Score = 39.7 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 35/224 (15%), Positives = 85/224 (37%), Gaps = 29/224 (12%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLK---LLHVCPVYCRFCFRREMVGSQKG 123 L ED + + + + + +R+ L+ C C +CF ++ ++ Sbjct: 60 LIECGYIVEDNMNEKAYVKVNLLKNRFESSNLMLTIAPTMACNFRCVYCFEKDQYHNKT- 118 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVI---FTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 +S + ++ + +++ + + + + GG+PLI K++ ++ + I +++ Sbjct: 119 --MSEETAQSIVNFVKTNASKLDTLNVTWYGGEPLIA-MKQIVRISEDFLEICKENNIQY 175 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQ 240 + I + +N E +Q L G + P E + + ++++ Sbjct: 176 -TASVITNGYLLNKEKVQTLISCGVNDIQVT-VDGPKEV-HDLRRPLVSGRGTFDVIMNN 232 Query: 241 SVLLKG-------INDDPEILANLMR--------TFVELRIKPY 269 +KG IN D + NL + +E + PY Sbjct: 233 LKQIKGMIKIFMRINTDQDNWLNLHEIVGFLKENSLLEN-VIPY 275 >gi|298530196|ref|ZP_07017598.1| Radical SAM domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298509570|gb|EFI33474.1| Radical SAM domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 348 Score = 39.7 bits (92), Expect = 0.61, Method: Composition-based stats. Identities = 34/192 (17%), Positives = 60/192 (31%), Gaps = 42/192 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L+L C + C +C+ G+ L ++ AA+ E ++ GG+PL Sbjct: 31 LELSMACNLRCIYCY--AESGAPLENELRFEEITAAVDQAVELGARRIIVLGGGEPLAHP 88 Query: 159 H--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 LQ + K I + + I E + E G I + Sbjct: 89 QILPVLQHIYKRGAAID---LFTNGT--------LITAETAEIFAELGVSPVIKM----- 132 Query: 217 YEFSEEAIAAIS--------------RLANAGII-----LLSQSVLLKGINDDPEILANL 257 + E ++ L AG L Q+V+ + + + L + Sbjct: 133 NSMNPEVQDRLAGRPGAFQDISQGFKHLQQAGYPSSGLALGVQTVICRH---NLDELPEM 189 Query: 258 MRTFVELRIKPY 269 E + PY Sbjct: 190 WAWIRENSMVPY 201 >gi|325479090|gb|EGC82190.1| iron-only hydrogenase maturation rSAM protein HydG [Anaerococcus prevotii ACS-065-V-Col13] Length = 472 Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 47/117 (40%), Gaps = 5/117 (4%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117 E +L +ED + + K + ++ Y +RI+L + C C +C Sbjct: 51 SHREAFVLLSCKEDDLNEEIFKLAKELKYKFYANRIVLFAPLYLSNYCVNGCSYCPYHGQ 110 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + LS ++ + +Q++ + G DP+ + + + + T+ IKH Sbjct: 111 NRTIPRRKLSQEEIREQVIALQDQGHKRLALEAGEDPVNNPLEYILESIHTIYNIKH 167 >gi|302874938|ref|YP_003843571.1| MiaB-like tRNA modifying enzyme YliG [Clostridium cellulovorans 743B] gi|307690444|ref|ZP_07632890.1| MiaB-like tRNA modifying enzyme YliG [Clostridium cellulovorans 743B] gi|302577795|gb|ADL51807.1| MiaB-like tRNA modifying enzyme YliG [Clostridium cellulovorans 743B] Length = 445 Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 12/114 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 L++ C C +C + G + + + A + + E+I D Sbjct: 145 KQTAYLRISEGCSNNCSYCIIPRIRGKYR-SRTKESILKEAEDLVSS--GVKELILVAQD 201 Query: 154 PL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 I + K L ++L+ L IK ++ +R P+ I ELI + Sbjct: 202 TTRYGIDIYNKKVLHELLRDLSKIKGIKWIRI----LYCYPEEIYDELIDEIAN 251 >gi|256825735|ref|YP_003149695.1| GTP cyclohydrolase subunit MoaA [Kytococcus sedentarius DSM 20547] gi|256689128|gb|ACV06930.1| GTP cyclohydrolase subunit MoaA [Kytococcus sedentarius DSM 20547] Length = 333 Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Query: 86 LKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEK 141 G+V R+ + + L+ C + C +C E V K +LS ++ A+A + Sbjct: 3 TPGLVDRFGRVHTDLRISLIDKCNLRCTYCLPAEGVPWMAKDELLSREEL-RAIAAVAVA 61 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173 S I E+ TGG+PL+ L+ ++ L ++ Sbjct: 62 SGITEIRLTGGEPLLRPD--LEDLVADLASLE 91 >gi|304440349|ref|ZP_07400238.1| MiaB family RNA modification enzyme [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371101|gb|EFM24718.1| MiaB family RNA modification enzyme [Peptoniphilus duerdenii ATCC BAA-1640] Length = 444 Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 14/113 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GG 152 +K+ C +C +C ++ G + L ++ + Y+ E ++ G Sbjct: 149 VKISEGCDNFCTYCIIPKLKGKNRSRKL--ENIVGEVKYLVENGTREVILIAQNTTDYGI 206 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D + RL K+L L I+ ++ +R V + P ELI K K Sbjct: 207 D--LYGEYRLAKLLHELEKIEDLKWIR----VMYLYPDHFTKELIDEFKNNKK 253 >gi|301020499|ref|ZP_07184586.1| radical SAM domain protein [Escherichia coli MS 69-1] gi|300398687|gb|EFJ82225.1| radical SAM domain protein [Escherichia coli MS 69-1] Length = 445 Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 18/165 (10%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI 97 LTP A ++ P D R +P + + + E+ + + + R+ Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTVSP-----RKRL 59 Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGG 152 + + C +C FC F + + ++ E A + + + + I V F GG Sbjct: 60 VYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVYFGGG 119 Query: 153 DPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 P LS L +++ LR + + RV D +RI+ Sbjct: 120 TPSALSAHDLARIINILREKLPLAPDCEITIEGRVLNFDAERIDA 164 >gi|189425283|ref|YP_001952460.1| MiaB-like tRNA modifying enzyme [Geobacter lovleyi SZ] gi|189421542|gb|ACD95940.1| MiaB-like tRNA modifying enzyme [Geobacter lovleyi SZ] Length = 442 Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 17/127 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R L++ + C C +C + +V + EA + EV+ T Sbjct: 146 HTRAFLQIQNGCETGCSYCI-VPIARGPSRSVPPPEVLEAVSRLVAS--GYQEVVLTGIH 202 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 G D + L +++ L V LR S ++P + EL+ K++ + Sbjct: 203 MGAYGLD--LSPPGSLTALVQQLEDQNVVPRLRLGS----IEPNELTDELLTLFKKSSR- 255 Query: 207 VYIAIHA 213 + +H Sbjct: 256 LCHHLHI 262 >gi|73748729|ref|YP_307968.1| MiaB family tRNA modification protein [Dehalococcoides sp. CBDB1] gi|147669495|ref|YP_001214313.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. BAV1] gi|73660445|emb|CAI83052.1| tRNA modification enzyme, MiaB family [Dehalococcoides sp. CBDB1] gi|146270443|gb|ABQ17435.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. BAV1] Length = 416 Score = 39.7 bits (92), Expect = 0.62, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 51/155 (32%), Gaps = 30/155 (19%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R +K+ C +C +C RR ++S + A Y E++ Sbjct: 126 RTRSFIKIQDGCDNFCTYCIVPFVRRYKNCRGVDDIISEINLRQAEGY-------QEIVL 178 Query: 150 TGGDP--LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-- 205 TG + S L +++ + + LR S + P I L+ K Sbjct: 179 TGTEIGEYTSSGFNLAGLIEAILERTRIPRLRLSS----LQPNEITLPLLALWKNRRLCN 234 Query: 206 PVYIAIH---------ANHPYEFSEEAI--AAISR 229 ++A+ N PY ++ AI R Sbjct: 235 HFHMALQSGSDRILGLMNRPYSLTDYTRTLEAIRR 269 >gi|170694265|ref|ZP_02885419.1| transcriptional regulator, MarR family [Burkholderia graminis C4D1M] gi|170140688|gb|EDT08862.1| transcriptional regulator, MarR family [Burkholderia graminis C4D1M] Length = 181 Score = 39.7 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Query: 218 EFSEEAIAAISRLANAGIILLSQSVLLKGIND-DPEILANLMRTFVELRIKP 268 E + + A +L G +L+Q L+G +D D L L+ F+ I P Sbjct: 102 ELTPQGHEAAQQLPGIGAAVLNQQ--LRGFSDADLATLIELLSRFIANGIDP 151 >gi|269139140|ref|YP_003295841.1| coproporphyrinogen III oxidase [Edwardsiella tarda EIB202] gi|267984801|gb|ACY84630.1| coproporphyrinogen III oxidase [Edwardsiella tarda EIB202] gi|304559064|gb|ADM41728.1| Radical SAM family protein HutW [Edwardsiella tarda FL6-60] Length = 466 Score = 39.7 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 55/145 (37%), Gaps = 27/145 (18%) Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--- 95 +TP +A A + IP E +P + P+ + +G H Sbjct: 5 ITPYLA------------AAEGIPFPERWATMPWRHQQPLP--ADALAQGWQHLCQRTLP 50 Query: 96 ---RILLKLLHVCPVYCRFC--FRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 R++ + C +C FC ++ V + E+AL +Q+ + I Sbjct: 51 PNKRLVYVHIPFCATHCTFCGFYQNRFSEQAVARYCDYLQREIALESALP-LQQSAPIHA 109 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY 171 + GG P LS ++L +++ LR Sbjct: 110 IYLGGGTPSALSAEQLYRLITQLRS 134 >gi|251780641|ref|ZP_04823561.1| heme biosynthesis [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084956|gb|EES50846.1| heme biosynthesis [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 451 Score = 39.7 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 31/166 (18%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIA-LTPVI---ANLINPHNPNDPIARQFIPQKEELN 68 DL + N +K ++ + +K +SN Y ++ LI+ I Sbjct: 32 DLVDDNKLKSKE-ELVKALSNKYEENVISEAYDEILELIDNG-----IL----------- 74 Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128 +D + HS + Y + L ++H C + C++CF E V+S Sbjct: 75 ----YSKDQYEEIAHSSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYHGHKGVMSL 128 Query: 129 KDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171 + A+ Y+ ++S E+ GG+P + ++ ++K R Sbjct: 129 DVAKKAIDYVVKRSGPRKNIEIDLFGGEP-TMIMDTIKDIIKYARD 173 >gi|188590051|ref|YP_001922114.1| heme biosynthesis [Clostridium botulinum E3 str. Alaska E43] gi|188500332|gb|ACD53468.1| heme biosynthesis [Clostridium botulinum E3 str. Alaska E43] Length = 451 Score = 39.7 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 65/166 (39%), Gaps = 31/166 (18%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIA-LTPVI---ANLINPHNPNDPIARQFIPQKEELN 68 DL + N +K ++ + +K +SN Y ++ LI+ I Sbjct: 32 DLVDDNKLKSKE-ELVKALSNKYEENVISEAYDEILELIDNG-----IL----------- 74 Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128 +D + HS + Y + L ++H C + C++CF E V+S Sbjct: 75 ----YSKDQYEEIAHSSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYHGHKGVMSL 128 Query: 129 KDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171 + A+ Y+ ++S E+ GG+P + ++ ++K R Sbjct: 129 DVAKKAIDYVVKRSGPRKNIEIDLFGGEP-TMIMDTIKDIIKYARD 173 >gi|84687584|ref|ZP_01015459.1| pyrroloquinoline quinone biosynthesis protein PqqE [Maritimibacter alkaliphilus HTCC2654] gi|84664374|gb|EAQ10863.1| pyrroloquinoline quinone biosynthesis protein PqqE [Rhodobacterales bacterium HTCC2654] Length = 383 Score = 39.7 bits (92), Expect = 0.63, Method: Composition-based stats. Identities = 49/268 (18%), Positives = 87/268 (32%), Gaps = 65/268 (24%) Query: 79 GDNNHSPLKGI--VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 + + G+ H P +LL++ H CP+ C +C + + L+++D L Sbjct: 6 HEPDSKLAPGVGTTHGLPVAVLLEVTHRCPLQCPYCS-NPLNLERPAAELATEDWVRVLH 64 Query: 137 YIQEKSQIWEVIFTGGDPL--------------------------ILSHKRLQKVLKTLR 170 + + +V F+GG+P+ LS +RL + + Sbjct: 65 EL-ADLGVLQVHFSGGEPMARRDIVELVAAATDAGLYSNLITSGVNLSRERLAALAEA-- 121 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 + HVQI Q E + H + A Sbjct: 122 GLSHVQI----------SFQGSESETADRVGGYRNG--------HAKKL-----EAARLT 158 Query: 231 ANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI-------KPYYLHHPDLAAGTSHF 283 AG L +V+ + + L ++ VEL YY A Sbjct: 159 REAGFPLTVNAVMHRQ---NLHQLPEMIDMAVELGAQRIEVANVQYYGWALRNRAALMPT 215 Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYIL 311 IE +IVA +E++ G+ Y++ Sbjct: 216 MEQIETCNRIVAEAEERLRGILMIDYVV 243 >gi|218530828|ref|YP_002421644.1| molybdenum cofactor biosynthesis protein A [Methylobacterium chloromethanicum CM4] gi|240139398|ref|YP_002963873.1| molybdenum biosynthetic protein A [Methylobacterium extorquens AM1] gi|218523131|gb|ACK83716.1| molybdenum cofactor biosynthesis protein A [Methylobacterium chloromethanicum CM4] gi|240009370|gb|ACS40596.1| molybdenum biosynthetic protein A [Methylobacterium extorquens AM1] Length = 344 Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 39/173 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C +M K +L+ ++ + + ++ TGG+PL+ Sbjct: 30 ISVTDRCDFRCAYCMSEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRR 88 Query: 159 HKRLQKVLKTLRYIKHVQILRF--------HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + + + L H++ S++ R PEL + L V + Sbjct: 89 D--IMHLFRRLSR--HLKSGTLDELTLTTNGSQL-----ARFAPELAE-LGVRRINVSLD 138 Query: 211 IHANHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKGINDD 250 + AI+R AGI + +V LKG+N+D Sbjct: 139 T-------LDPDKFRAITRRGDLSVVLAGIEAARAAGIKVKINAVALKGVNED 184 >gi|187735294|ref|YP_001877406.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187425346|gb|ACD04625.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 415 Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 16/115 (13%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF 149 R P ++ + C + C C+ KG + D + A I ++ ++F Sbjct: 45 RKP-IVVWNITRTCNLKCVHCYADASARKFKGEL----DWDQCCAVIDDLADYKVNALLF 99 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 +GG+PL+ R ++L+ K +++ + RI PE KE G Sbjct: 100 SGGEPLVHP--RFMELLERATG-KGLKV------TISTNGTRITPEAAARFKELG 145 >gi|157112872|ref|XP_001657654.1| molybdopterin cofactor synthesis protein a [Aedes aegypti] gi|108884620|gb|EAT48845.1| molybdopterin cofactor synthesis protein a [Aedes aegypti] Length = 481 Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 54/127 (42%), Gaps = 11/127 (8%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYI 138 SPL R+ + + L C + C++C E V + K +L++ + LA + Sbjct: 100 QETDSPLTDNFGRFHSYLRISLTERCNLRCKYCMPAEGVQLTPKDNLLTTDEVLR-LATL 158 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH------SRVPIVDPQRI 192 + + ++ TGG+P + L ++++ L+ I ++ + +R + QR Sbjct: 159 FVEQGVRKIRLTGGEPTVRKD--LPEIIERLKRIPLLESVGITTNGLMLTRQLVGL-QRA 215 Query: 193 NPELIQC 199 + + Sbjct: 216 GLDALNI 222 >gi|78044427|ref|YP_360054.1| radical SAM domain-containing protein [Carboxydothermus hydrogenoformans Z-2901] gi|77996542|gb|ABB15441.1| radical SAM domain protein [Carboxydothermus hydrogenoformans Z-2901] Length = 331 Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 38/216 (17%), Positives = 80/216 (37%), Gaps = 47/216 (21%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C +YC C+R G++ LS+++ +A + I + + +IF+GG+PL+ Sbjct: 3 VSWNTTNQCNLYCEHCYRDA--GAKVEEELSTEEGKALIDEIVK-AGFKIMIFSGGEPLM 59 Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 + +++ +K V F + + I E+ Q LK+AG + + I Sbjct: 60 RED--ILELVDYASQKGLKPV----FGTNGTL-----ITLEMAQKLKKAG-ALAMGISL- 106 Query: 215 HPYEFSEE--------------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 E A+ + AG+ + +++ D+ E L + Sbjct: 107 --DSVDPEKHDRFRASPGSWEKAVEGMKNCKAAGLPFQIHTTVVEWNYDEVEQLTDFA-- 162 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 VE+ +++ F + I Sbjct: 163 -VEIGAIAHHIF----------FLVPTGRAVNIEQE 187 >gi|295400797|ref|ZP_06810773.1| Radical SAM domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|312111351|ref|YP_003989667.1| radical SAM protein [Geobacillus sp. Y4.1MC1] gi|294977060|gb|EFG52662.1| Radical SAM domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|311216452|gb|ADP75056.1| Radical SAM domain protein [Geobacillus sp. Y4.1MC1] Length = 390 Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 29/195 (14%), Positives = 60/195 (30%), Gaps = 23/195 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGG 152 P ++ ++ C + C C + + + Y + +FTGG Sbjct: 27 PFIVIWEVTRACQLKCVHCRADAQPVPDPRELTHEEGIKLIDDIYEMNNPML---VFTGG 83 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVYIAI 211 D ++ L ++ IK + P V +++ L G + Sbjct: 84 DCMMRED--LFELAD--YAIKKGMRVSITPSATPNVTKEKMEKAKQVGLSRWGFSLDGPT 139 Query: 212 HANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 H E + E I ++ L + L +V+ + D E +A L+ Sbjct: 140 PEIHDRFRGTPGSFELTIEKIKYLNEL---NMPLQINTVISRYNYDHLEEMAKLVADLKA 196 Query: 264 LRIKPYYLHHPDLAA 278 + +Y+ Sbjct: 197 VM---WYIFLLVPTG 208 >gi|169832127|ref|YP_001718109.1| radical SAM domain-containing protein [Candidatus Desulforudis audaxviator MP104C] gi|169638971|gb|ACA60477.1| Radical SAM domain protein [Candidatus Desulforudis audaxviator MP104C] Length = 453 Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 40/230 (17%), Positives = 85/230 (36%), Gaps = 46/230 (20%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPL 155 ++ + C + C C + + L+ + L +E +V+ F+GG+P Sbjct: 102 AIIDVTQACDLKCPAC----LADAGGSGFLAPEQVARLLDVYRECEGNPDVLQFSGGEPT 157 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHA 213 + L ++L L K +++++ ++ RI + + L E VY+ Sbjct: 158 LHP--ELFELL-ALARAKGIRLVQLNTNGL-----RIARDDAFLARLAEFRPSVYL---- 205 Query: 214 NHPYEFSEEAIA----------------AISRLANAGIILLSQSVLLKGINDDPEILANL 257 +F + A+ RL++ GI ++ + ++ G+ND L +L Sbjct: 206 ----QFDGLSAVVYRRIRGADLLADKLLAVERLSDCGIPIVLSATVVPGVND--GELGDL 259 Query: 258 MR-TFVELRIKPYYLHHPDLAAGTSHFRL-TIEEGQ--KIVASLKEKISG 303 +R RI+ + P G + I+ L+ + G Sbjct: 260 VRFALQNPRIR-GLMFQPVAHIGRHRLEFDPLNRITLPDILKGLERQTEG 308 >gi|163852070|ref|YP_001640113.1| molybdenum cofactor biosynthesis protein A [Methylobacterium extorquens PA1] gi|163663675|gb|ABY31042.1| molybdenum cofactor biosynthesis protein A [Methylobacterium extorquens PA1] Length = 344 Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 61/173 (35%), Gaps = 39/173 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C +M K +L+ ++ + + ++ TGG+PL+ Sbjct: 30 ISVTDRCDFRCAYCMSEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRR 88 Query: 159 HKRLQKVLKTLRYIKHVQILRF--------HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + + + L H++ S++ R PEL + L V + Sbjct: 89 D--IMHLFRRLSR--HLKSGTLDELTLTTNGSQL-----ARFAPELAE-LGVRRINVSLD 138 Query: 211 IHANHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKGINDD 250 + AI+R AGI + +V LKG+N+D Sbjct: 139 T-------LDPDKFRAITRRGDLSVVLAGIEAARAAGIKVKINAVALKGVNED 184 >gi|15898641|ref|NP_343246.1| coenzyme PQQ synthesis protein E (pqqE-5) [Sulfolobus solfataricus P2] gi|284175851|ref|ZP_06389820.1| coenzyme PQQ synthesis protein E (pqqE-5) [Sulfolobus solfataricus 98/2] gi|13815098|gb|AAK42036.1| Coenzyme PQQ synthesis protein E (pqqE-5) [Sulfolobus solfataricus P2] gi|261603136|gb|ACX92739.1| Radical SAM domain protein [Sulfolobus solfataricus 98/2] Length = 350 Score = 39.7 bits (92), Expect = 0.64, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 16/121 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + ++ CP+ C+ C R + LS+++++ L I ++ ++FTGGD Sbjct: 7 PHLVFWEVTKACPLSCKHC-RANAIDKPLPGELSTEESKKLLEDIARFGKV-VIVFTGGD 64 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIA 210 PL S + + + Y K + ++ + P R+ E ++ + + + I+ Sbjct: 65 PLSRSD-----IFEIMEYAKSLGLI------VSIAPSPSYRLRDETMKMISNYARYMSIS 113 Query: 211 I 211 I Sbjct: 114 I 114 >gi|323692405|ref|ZP_08106641.1| hypothetical protein HMPREF9475_01504 [Clostridium symbiosum WAL-14673] gi|323503545|gb|EGB19371.1| hypothetical protein HMPREF9475_01504 [Clostridium symbiosum WAL-14673] Length = 324 Score = 39.7 bits (92), Expect = 0.65, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 30/163 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQEKS--QIWEVIFTGGD 153 + + C + C +C + LS K E LA+ +E + I + TGG+ Sbjct: 16 VSVTDRCNLNCAYC------RPENSPFLSRKALLTSEEILAFCREAAILGIRHIKITGGE 69 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+ + +++ L+ ++ + + + E + LKEAG I I Sbjct: 70 PLLRTDC--CSIVEKLKKTPGIETVTLTTNGL------LLSEHLGRLKEAGID-GINISM 120 Query: 214 NHPYE-----FS-----EEAIAAISRLANAGIILLSQSVLLKG 246 + P + E + +I A GI + V++ G Sbjct: 121 DTPDRACYAALTGSDRLPELLDSIRSTAGLGIPMKINCVIMDG 163 >gi|222445792|ref|ZP_03608307.1| hypothetical protein METSMIALI_01435 [Methanobrevibacter smithii DSM 2375] gi|222435357|gb|EEE42522.1| hypothetical protein METSMIALI_01435 [Methanobrevibacter smithii DSM 2375] Length = 234 Score = 39.7 bits (92), Expect = 0.65, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 8/68 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 L+ + CP+ CR+C E++ K+ + A +I V+ +GG+PL Sbjct: 19 LVIFMSKCPLACRYCHNAELLDDNTQLSFEEIKKEIDDAADFIDA------VVISGGEPL 72 Query: 156 ILSHKRLQ 163 + S ++ Sbjct: 73 VQSDAVIE 80 >gi|146296852|ref|YP_001180623.1| RNA modification protein [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145410428|gb|ABP67432.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 434 Score = 39.7 bits (92), Expect = 0.65, Method: Composition-based stats. Identities = 23/126 (18%), Positives = 49/126 (38%), Gaps = 13/126 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R +K+ C +C +C GS LSS + + + E + TG Sbjct: 141 RTRAFIKIEEGCEQFCSYCIIPYARGSVVSRSLSSILDEVQRL-----ASNGYKEFVITG 195 Query: 152 GD-PLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 + L V++ + I+ V+ +R S PIV + L++ +++ Sbjct: 196 INISAYGKDLDYKVTLVDVIEEISKIEKVRRIRLSSLEPIVMKEDFIKRLVK-IEKLCHH 254 Query: 207 VYIAIH 212 +++++ Sbjct: 255 LHLSLQ 260 >gi|295100395|emb|CBK97940.1| MiaB-like tRNA modifying enzyme [Faecalibacterium prausnitzii L2-6] Length = 431 Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 18/119 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R +K+ C C +C G + S + A L + S EV+ + Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--SEESILAELRQLAA-SGYREVVLSAIS 197 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L ++++ ++ ++ +R S +DP + PE I L K Sbjct: 198 LPSYGLDTGT----NLVELVEKCARVEGIERIRLGS----LDPDMLTPESITRLAAVDK 248 >gi|298529710|ref|ZP_07017113.1| Radical SAM domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511146|gb|EFI35049.1| Radical SAM domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 355 Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 4/78 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L ++C CRFC + G + V+S A+ + I E+ GG + Sbjct: 58 LNYTNICSNACRFCAYSKRAGEEGAYVMSVDQIRVAVKS-RMHEPIDEIHVVGG---LNP 113 Query: 159 HKRLQKVLKTLRYIKHVQ 176 L+ L+ IK ++ Sbjct: 114 DLPYDYYLEMLKSIKEIR 131 >gi|207743614|ref|YP_002260006.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum IPO1609] gi|206595013|emb|CAQ61940.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum IPO1609] Length = 391 Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 7/77 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +++ +LS ++ E + E + ++ TGG+ Sbjct: 66 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 124 Query: 154 PLILSH-KRLQKVLKTL 169 PL+ +RL ++L L Sbjct: 125 PLLRKDIERLVEMLARL 141 >gi|126460321|ref|YP_001056599.1| radical SAM domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126250042|gb|ABO09133.1| Radical SAM domain protein [Pyrobaculum calidifontis JCM 11548] Length = 378 Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 34/168 (20%), Positives = 68/168 (40%), Gaps = 30/168 (17%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-F 149 H P + + CP+ C+ C R + + LS+++ + + + E ++ Sbjct: 12 HEAPLLVFWESTKACPLACKHC-RADAILKPLPGELSTEEGKRLIEQVAEFGDPKPLLII 70 Query: 150 TGGDPLILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPV 207 TGGDPL+ + L +++ + V + P V ++ E ++ +K +G K + Sbjct: 71 TGGDPLMRAD--LFELVDYANSLGVPVSL------APAVSKS-LDDEALRRIKSSGVKSI 121 Query: 208 YIA-------IHANHPYEFS------EEAIAAISRLANAGIILLSQSV 242 I+ H E E ++AI R + GI + +V Sbjct: 122 SISLDGATAETH----DELRGVPGSFAETVSAIKRALDLGISVQVNTV 165 >gi|134046659|ref|YP_001098144.1| radical SAM domain-containing protein [Methanococcus maripaludis C5] gi|132664284|gb|ABO35930.1| Radical SAM domain protein [Methanococcus maripaludis C5] Length = 369 Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 31/139 (22%), Positives = 57/139 (41%), Gaps = 20/139 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI--------FT 150 +++ CP CRFC ++ G + + E+ + ++ I V T Sbjct: 138 IEITRGCPYNCRFCQTPQIFGKN----IRHRSIESIVKIVKTMGDIRFVTPNAFSYGSKT 193 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G P + ++L+K++K L IK + L F + V P+ + E + + + YI Sbjct: 194 GTKP---NIEKLEKLMKHLFEIK--KRLFFGTFPSEVRPEFVTSETLDLINKYCDNRYI- 247 Query: 211 IHANHPYEFSEEAIAAISR 229 H S+E + I R Sbjct: 248 -HFG-AQSGSDEVLKHIRR 264 >gi|326791736|ref|YP_004309557.1| biotin and thiamin synthesis associated [Clostridium lentocellum DSM 5427] gi|326542500|gb|ADZ84359.1| biotin and thiamin synthesis associated [Clostridium lentocellum DSM 5427] Length = 472 Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 34/89 (38%), Gaps = 4/89 (4%) Query: 90 VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 Y +RI+ L L + C C +C L+ ++ A + +Q+ Sbjct: 77 QRFYGNRIVMFAPLYLSNYCVNGCIYCPYHHKNKHITRKKLTQEEIRAEVIALQDMGHKR 136 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + G DP + + +KT+ IKH Sbjct: 137 LALEAGEDPANNPLDYILESIKTIYSIKH 165 >gi|261349664|ref|ZP_05975081.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Methanobrevibacter smithii DSM 2374] gi|288861622|gb|EFC93920.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Methanobrevibacter smithii DSM 2374] Length = 234 Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 8/68 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 L+ + CP+ CR+C E++ K+ + A +I V+ +GG+PL Sbjct: 19 LVIFMSKCPLACRYCHNAELLDDNTQLSFEEIKKEIDDAADFIDA------VVISGGEPL 72 Query: 156 ILSHKRLQ 163 + S ++ Sbjct: 73 VQSDAVIE 80 >gi|153806285|ref|ZP_01958953.1| hypothetical protein BACCAC_00541 [Bacteroides caccae ATCC 43185] gi|149130962|gb|EDM22168.1| hypothetical protein BACCAC_00541 [Bacteroides caccae ATCC 43185] Length = 436 Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 30/227 (13%), Positives = 72/227 (31%), Gaps = 71/227 (31%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISKPI--EEILDEVRYLVSQGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G D + + L ++++ + I V+ +R H P +L + ++E G Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPIDLFRVMRERGN----- 244 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 + L+ I+D+ + LMR Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316 +T E+ +++ ++++ G+ + ++ PG Sbjct: 268 --------------VTKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE 300 >gi|114798903|ref|YP_759322.1| radical SAM domain-containing protein [Hyphomonas neptunium ATCC 15444] gi|114739077|gb|ABI77202.1| radical SAM domain protein [Hyphomonas neptunium ATCC 15444] Length = 311 Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 52/149 (34%), Gaps = 16/149 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L +C + C C+ + + L+ D L + E+++I TGG+P + Sbjct: 36 LNTGTLCNIECANCYIESSPKNDRLVYLTLADVLPFLDELTEQAEIG---ITGGEPFMCP 92 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG----KPVYIAIH-- 212 L + L + +L R P++ P R+ L G V + H Sbjct: 93 D-ILAIMGAALVRGHSLLVLTNAMR-PMMRP-RVQAGLKDLAARYGARMTLRVSLDSHDA 149 Query: 213 -ANHPYEFSEEAIAAI---SRLANAGIIL 237 N A + LA AGI + Sbjct: 150 ALNDAERGEGAFAEACTGLAWLAQAGIPV 178 >gi|71281310|ref|YP_268103.1| radical SAM domain-containing protein [Colwellia psychrerythraea 34H] gi|71147050|gb|AAZ27523.1| radical SAM domain protein [Colwellia psychrerythraea 34H] Length = 300 Score = 39.7 bits (92), Expect = 0.66, Method: Composition-based stats. Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 8/87 (9%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKS-QIWEVIFTGG 152 ++L++ + C C FC +M S+ K E + I V G Sbjct: 20 LILQVTNGCSWNKCTFC---DMYTSEDKKFKPKKVDVIEQEILKIANSGISTRRVFLADG 76 Query: 153 DPLILSHKRLQKVLKTL-RYIKHVQIL 178 D ++L RL+++L+ + ++ V + Sbjct: 77 DAMMLPFNRLKEILELIKLHLPQVSRV 103 >gi|291166144|gb|EFE28190.1| radical SAM domain protein [Filifactor alocis ATCC 35896] Length = 462 Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 19/72 (26%), Positives = 39/72 (54%), Gaps = 4/72 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C +CF ++ K ++S + + AL ++ E S EV F GG+PL Sbjct: 101 LHVAHTCNLACDYCFAKQGKYHGKDGLMSFEVGKKALDFLIEHSGTRTNLEVDFFGGEPL 160 Query: 156 ILSHKRLQKVLK 167 ++ + +++++ Sbjct: 161 -MNWEVVKQLVA 171 >gi|255524216|ref|ZP_05391175.1| MiaB-like tRNA modifying enzyme YliG [Clostridium carboxidivorans P7] gi|296185337|ref|ZP_06853747.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium carboxidivorans P7] gi|255512041|gb|EET88322.1| MiaB-like tRNA modifying enzyme YliG [Clostridium carboxidivorans P7] gi|296050171|gb|EFG89595.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Clostridium carboxidivorans P7] Length = 446 Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 44/111 (39%), Gaps = 12/111 (10%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 +++ C +C +C ++ G + S ++ + ++ + E+I D Sbjct: 148 TAYIRIAEGCNNFCTYCIIPKIRGKYRSR--SMENIIKEAQSLAQQ-GVKEIILVAQDTT 204 Query: 156 -----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 I K L ++++ L I+++ +R P+ I ELI + Sbjct: 205 RYGTDIYGKKALSELIRKLSKIENIHWIRI----LYCYPEEITEELIDEIA 251 >gi|254515478|ref|ZP_05127538.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium NOR5-3] gi|219675200|gb|EED31566.1| molybdenum cofactor biosynthesis protein A [gamma proteobacterium NOR5-3] Length = 361 Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 42/207 (20%), Positives = 84/207 (40%), Gaps = 28/207 (13%) Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFCFRRE 116 +P K ++ + + + + ++ R+ R+ L + C C +C + Sbjct: 5 ILPVKSAQRLVTAAQRSTLRAMHENTPPTLIDRFGRRVDYLRLSVTDRCDFRCVYCMAED 64 Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 M K +L+ ++ + ++ TGG+PL+ + ++++ L + + Sbjct: 65 MTFVPKSEILTLEELAQVAQAF-VNLGVRKIRLTGGEPLV--RHNIMQLVEQLGAMPGLD 121 Query: 177 IL---RFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFS--------EEAI 224 L S++ QR L Q L +AG K + I++ + P F E+ I Sbjct: 122 ELVMTTNGSQL-----QR----LAQPLSDAGVKRLNISLDSLQPRRFRQITRVGHLEQVI 172 Query: 225 AAISRLANAGI-ILLSQSVLLKGINDD 250 A I AG L +V+++G NDD Sbjct: 173 AGIDAACAAGFERLRINAVIMRGDNDD 199 >gi|315651497|ref|ZP_07904518.1| 2-methylthioadenine synthetase [Eubacterium saburreum DSM 3986] gi|315486232|gb|EFU76593.1| 2-methylthioadenine synthetase [Eubacterium saburreum DSM 3986] Length = 440 Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 28/116 (24%), Positives = 41/116 (35%), Gaps = 16/116 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150 LK+ C C +C + G+ + L A I E+I Sbjct: 146 AYLKIAEGCNKNCTYCIIPSLRGNYRSYPL-DDLIAQAKD--LATQGIKELILVAQETTL 202 Query: 151 -GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D I K L K+LK L I+ ++ +R P+ I ELI + K Sbjct: 203 YGVD--IYGKKTLPKLLKELAKIEGIEWIRI----LYCYPEEITDELIDVIASEDK 252 >gi|294673495|ref|YP_003574111.1| 30S ribosomal protein S12 methylthiotransferase RimO [Prevotella ruminicola 23] gi|294473743|gb|ADE83132.1| ribosomal protein S12 methylthiotransferase RimO [Prevotella ruminicola 23] Length = 437 Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 46/112 (41%), Gaps = 14/112 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIW----EVIFT 150 +K+ C +C +C + G K ++ + Y+ Q + E+ + Sbjct: 137 AYIKISEGCDRHCAYCAIPLITG--KHQSRPMQEILDEVRYLVSQGTKEFNVIAQELTYY 194 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 G D + + + ++++ + I V+ +R H P P +L++ ++E Sbjct: 195 GVD--LDGKQHIAELIEQMADIPGVEWIRLHYAYPTHFPW----DLLRVIRE 240 >gi|251770958|gb|EES51543.1| radical SAM family protein [Leptospirillum ferrodiazotrophum] Length = 357 Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 43/199 (21%), Positives = 69/199 (34%), Gaps = 51/199 (25%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKS----QIWEVIF 149 + L C + CRFC R +G + + A +++ I ++F Sbjct: 101 TLCLSTQAGCGIGCRFC-RTASMGLTRNLSTAEILSQWLLAARFVETLPPGESHIDHIVF 159 Query: 150 TG-GDPLILSHKRLQKVLKTLRYIKHV-------QILRFHSRVPIVDPQRINPELIQCLK 201 G G+PL L+ ++ +R + H + + + + P RI+ L Sbjct: 160 MGMGEPL----ANLEALIPAIRSLTHPDGAGLSPRRITVSTSGLV--P-RIDT-----LG 207 Query: 202 EAGKPVYIAIHANHP-----YEFSE--------EAIAAISRLANAGIILLS------QSV 242 EA V +AI P E E +AA R L + + V Sbjct: 208 EANTGVRLAISLCAPDDALRREIMPVGRIYSIEEILAACRRF-----PLRNRDRITFEYV 262 Query: 243 LLKGINDDPEILANLMRTF 261 LL G+ND P L R Sbjct: 263 LLAGVNDSPLQARQLGRLL 281 >gi|238619478|ref|YP_002914303.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4] gi|238380547|gb|ACR41635.1| Radical SAM domain protein [Sulfolobus islandicus M.16.4] Length = 350 Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 12/119 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + ++ CP+ C+ C R + L+++++ L I ++ ++FTGGD Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELNTEESRKLLEDIARFGKV-VIVFTGGD 64 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211 PL S + ++++ + + V + P P R++ E ++ + + + I++ Sbjct: 65 PLSRSD--IFELMEYAKSLGLVVSI-----AP--SPSHRLDDETMKMISNYARYMSISL 114 >gi|164686351|ref|ZP_02210381.1| hypothetical protein CLOBAR_02789 [Clostridium bartlettii DSM 16795] gi|164601953|gb|EDQ95418.1| hypothetical protein CLOBAR_02789 [Clostridium bartlettii DSM 16795] Length = 441 Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 33/154 (21%), Positives = 58/154 (37%), Gaps = 36/154 (23%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C C FCF ++ + T+ D ++ L+++Q V T +S + + Sbjct: 93 SCRNKCVFCFIDQLPKGMRETLYFKDD-DSRLSFLQGN----FVTLT-----NMSEEDID 142 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223 ++K I + + H+ P E + + HA + Sbjct: 143 NIIK--YRISPIN-ISVHTTNP----------------ELRRKMITNKHA-------GKL 176 Query: 224 IAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 I ++RLA+A I + Q VL G ND E+ L Sbjct: 177 IDTMNRLADAHIEMNCQIVLCPGYNDKEELDRTL 210 >gi|150021472|ref|YP_001306826.1| biotin synthase [Thermosipho melanesiensis BI429] gi|149793993|gb|ABR31441.1| Radical SAM domain protein [Thermosipho melanesiensis BI429] Length = 341 Score = 39.7 bits (92), Expect = 0.67, Method: Composition-based stats. Identities = 26/144 (18%), Positives = 52/144 (36%), Gaps = 15/144 (10%) Query: 74 REDPIGDNNHSPLKGIVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128 D D S I +Y R +++ + C + C +C R + K ++ Sbjct: 23 STDKYNDEILSLADEIRGKYVGNEVHIRAIIEFSNYCKMDCLYCGLRAPNKNLKRYRMTP 82 Query: 129 KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188 ++ I +K+ V+ +G DP + L+ ++ ++ + L R Sbjct: 83 EEIYKRAQLIAQKNIKTIVLQSGEDPFY-TTDILKDLIIKIKSLDIAITLSIGER----- 136 Query: 189 PQRINPELIQCLKEAGKPVYIAIH 212 + E + KE G Y+ H Sbjct: 137 ----DFEEYKIWKETGADRYLMRH 156 >gi|323474371|gb|ADX84977.1| Fe-S oxidoreductase family [Sulfolobus islandicus REY15A] gi|323476690|gb|ADX81928.1| Radical SAM domain protein [Sulfolobus islandicus HVE10/4] Length = 350 Score = 39.7 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 12/119 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + ++ CP+ C+ C R + L+++++ L I ++ ++FTGGD Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELNTEESRKLLEDIARFGKV-VIVFTGGD 64 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211 PL S + ++++ + + V + P P R++ E ++ + + + I++ Sbjct: 65 PLSRSD--IFELMEYAKSLGLVVSI-----AP--SPSHRLDDETMKMISNYTRYMSISL 114 >gi|258544941|ref|ZP_05705175.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Cardiobacterium hominis ATCC 15826] gi|258519861|gb|EEV88720.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Cardiobacterium hominis ATCC 15826] Length = 456 Score = 39.7 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 40/124 (32%), Gaps = 15/124 (12%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154 + ++ C YC FC G + D A A + + + E+ G + Sbjct: 151 TAFVSVMEGCSKYCTFCVVPYTRGEEVSRPF--DDVIAECASLAAQ-GVREINLLGQNVN 207 Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 L +++ + I + +RF + P+ LI+ + + Sbjct: 208 AYRGALFDGGTADLALLIEYVAAIDGIDRVRFTTSHPV----EFTDNLIEVYRRVP-QLV 262 Query: 209 IAIH 212 +H Sbjct: 263 SHLH 266 >gi|194334590|ref|YP_002016450.1| RNA modification enzyme, MiaB family [Prosthecochloris aestuarii DSM 271] gi|194312408|gb|ACF46803.1| RNA modification enzyme, MiaB family [Prosthecochloris aestuarii DSM 271] Length = 452 Score = 39.7 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 28/136 (20%), Positives = 45/136 (33%), Gaps = 20/136 (14%) Query: 85 PLKGIVHRY---PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAY 137 P ++ + R LK+ C C +C R + VL A Y Sbjct: 138 PAHSLIEKREMGRSRAFLKIQDGCDYGCGYCAIPLARGRSLSIDPDVVLDGARALAGAGY 197 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197 E++ TG + L LR + V + R RV ++P + ELI Sbjct: 198 C-------EIVLTGVNIAAYRFGELD-FAGLLRLLDQVDVQRI--RVSSIEPDCLTDELI 247 Query: 198 QCLKEAGKPVYIAIHA 213 + + + I H Sbjct: 248 DVVASSQR---IMPHF 260 >gi|295696236|ref|YP_003589474.1| RNA modification enzyme, MiaB family [Bacillus tusciae DSM 2912] gi|295411838|gb|ADG06330.1| RNA modification enzyme, MiaB family [Bacillus tusciae DSM 2912] Length = 484 Score = 39.7 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 39/103 (37%), Gaps = 11/103 (10%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILSH 159 C YC +C ++ + L +D A + + E I EV G + L L Sbjct: 195 GCNKYCTYCI-VPFTRGRERSRLP-EDVVAEVKQLAE-EGIREVTLLGQNVNDYGLDLGD 251 Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 +L+ + I ++ +RF + +P +LI + Sbjct: 252 VDFADLLQQVARIPGIERVRFTTS----NPWNFTDKLIDVIAA 290 >gi|148643466|ref|YP_001273979.1| molybdenum cofactor biosynthesis protein A [Methanobrevibacter smithii ATCC 35061] gi|89953725|gb|ABD83341.1| MoaA [Methanobrevibacter smithii] gi|148552483|gb|ABQ87611.1| molybdopterin cofactor biosynthesis protein A, MoaA [Methanobrevibacter smithii ATCC 35061] Length = 309 Score = 39.7 bits (92), Expect = 0.68, Method: Composition-based stats. Identities = 33/189 (17%), Positives = 70/189 (37%), Gaps = 27/189 (14%) Query: 92 RYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 +Y IL + + + C C +C +++ + I + + ++ Sbjct: 9 KYERPILSLRITITNKCNENCLYC--HHDGMDDSQEEMNADEIYRICE-IAKNIGVRKIR 65 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-V 207 +GG+PLI + +++ + + I I + + + LKEAG V Sbjct: 66 ISGGEPLIRKD--IVEIVSKIASLDFDDI-------SITSNGTLLGKYAKDLKEAGLNRV 116 Query: 208 YIAIHANHP--------YEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258 I++ +P E + I + G+ + VL+KGIN++ + ++ Sbjct: 117 NISLDTLNPETYKKVTTKNLLESSKNGILKAVEVGLYPVKINMVLMKGINEN--EVDDMF 174 Query: 259 RTFVELRIK 267 E I Sbjct: 175 EFCKEHGII 183 >gi|301163425|emb|CBW22976.1| putative oxidoreductase [Bacteroides fragilis 638R] Length = 432 Score = 39.7 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPI--EEILDEVRYLVSNGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + + L ++++ + I V+ +R H P EL + ++E Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPKELFRVMRER 242 >gi|90418074|ref|ZP_01225986.1| molybdenum cofactor biosynthesis protein [Aurantimonas manganoxydans SI85-9A1] gi|90337746|gb|EAS51397.1| molybdenum cofactor biosynthesis protein [Aurantimonas manganoxydans SI85-9A1] Length = 352 Score = 39.7 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 27/167 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C +M K +L+ ++ + + + ++ TGG+PL+ Sbjct: 37 VSVTDRCDFRCVYCMAEDMTFLPKRDLLTLEELDRLSSAFIA-KGVRKLRLTGGEPLV-- 93 Query: 159 HKRLQKVLKTLRYIKHVQI-----LRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 K + ++++L H++ L S++ R EL C + V + Sbjct: 94 RKNIMHLVRSLSR--HLESGALEELTLTTNGSQL-----ARFADELADCGVK-RLNVSLD 145 Query: 211 I-------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + I AGI + +V LKG N+D Sbjct: 146 TLDPDKFKQITRWGELDR-VMGGIRAAQAAGIKIKLNAVALKGFNED 191 >gi|83590234|ref|YP_430243.1| radical SAM family protein [Moorella thermoacetica ATCC 39073] gi|83573148|gb|ABC19700.1| Radical SAM [Moorella thermoacetica ATCC 39073] Length = 441 Score = 39.7 bits (92), Expect = 0.69, Method: Composition-based stats. Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 2/66 (3%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157 + C +C FCF G + + +D A L Y+Q ++ V TGG+PL+ Sbjct: 94 FFISLQCHRHCFFCFNPNQEG-YEYYTHNQRDCLAELEYLQRTGQEMKHVALTGGEPLLH 152 Query: 158 SHKRLQ 163 + L Sbjct: 153 PEETLA 158 >gi|313903997|ref|ZP_07837377.1| RNA modification enzyme, MiaB family [Eubacterium cellulosolvens 6] gi|313471146|gb|EFR66468.1| RNA modification enzyme, MiaB family [Eubacterium cellulosolvens 6] Length = 487 Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 23/155 (14%), Positives = 62/155 (40%), Gaps = 17/155 (10%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 +E+ + +++ D + + P+ Y + + +++ C +C +C + G +K Sbjct: 168 HPDEMVVDIQQKTDLMVEQ--LPVD---RTYKFKSGVNIMYGCNNFCSYCIVPYVRGREK 222 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL-----SHKRLQKVLKTLRYIKHVQI 177 D + + I EV+ G + + ++L+++ I ++ Sbjct: 223 SREPL--DILREIEQLVADGVI-EVMLLGQNVNSYGKTLENPVSFAELLESVAQIDGLRR 279 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 +RF + P+ ++ ELI + + + +H Sbjct: 280 VRFMTSH----PKDLSDELIAVMAKYPDKICPHLH 310 >gi|307565114|ref|ZP_07627622.1| translation initiation factor IF-1 [Prevotella amnii CRIS 21A-A] gi|307346145|gb|EFN91474.1| translation initiation factor IF-1 [Prevotella amnii CRIS 21A-A] Length = 72 Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ +E G +I+ ISG + YI LPG KV++ +++ K G Sbjct: 22 FRVELENGVEII----AHISGKMRMHYIKILPGDKIKVEMSPYDLTK---GRIVFR 70 >gi|288802855|ref|ZP_06408292.1| 2-methylthioadenine synthetase [Prevotella melaninogenica D18] gi|288334672|gb|EFC73110.1| 2-methylthioadenine synthetase [Prevotella melaninogenica D18] Length = 449 Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C A + E++ TG Sbjct: 156 RTRYFLKVQDGCNYFCTYCTI-PFARGFSRNPTIQSLVAQAEE--AAREGGKEIVLTGVN 212 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ +Q R S ++P I+ ELI E+ Sbjct: 213 IGDFGKTTGESFLDLVKALDKVEGIQRFRISS----LEPDLIDDELIAYCAESR---AFM 265 Query: 211 IHA 213 H Sbjct: 266 PHF 268 >gi|302346286|ref|YP_003814584.1| MiaB-like protein [Prevotella melaninogenica ATCC 25845] gi|302150387|gb|ADK96648.1| MiaB-like protein [Prevotella melaninogenica ATCC 25845] Length = 449 Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C A + E++ TG Sbjct: 156 RTRYFLKVQDGCNYFCTYCTI-PFARGFSRNPTIQSLVAQAEE--AAREGGKEIVLTGVN 212 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ +Q R S ++P I+ ELI E+ Sbjct: 213 IGDFGKTTGESFLDLVKALDKVEGIQRFRISS----LEPDLIDDELIAYCAESR---AFM 265 Query: 211 IHA 213 H Sbjct: 266 PHF 268 >gi|296127653|ref|YP_003634905.1| biotin and thiamin synthesis associated [Brachyspira murdochii DSM 12563] gi|296019469|gb|ADG72706.1| biotin and thiamin synthesis associated [Brachyspira murdochii DSM 12563] Length = 474 Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 20/76 (26%), Positives = 31/76 (40%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L L + C C +C G L+ + A + +Q + TG DP S Sbjct: 94 LYLSNYCINGCVYCPYHAKNGHIARKQLTQDEIRAEVTALQNMGHKRLALETGEDPDYAS 153 Query: 159 HKRLQKVLKTLRYIKH 174 + L + +KT+ IKH Sbjct: 154 MEYLLESIKTIYSIKH 169 >gi|73661954|ref|YP_300735.1| molybdenum cofactor biosynthesis protein A [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|82592974|sp|Q49ZI6|MOAA_STAS1 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|72494469|dbj|BAE17790.1| molybdenum cofactor biosynthesis protein A [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 340 Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 L + C C +C +E+ G K +L+ + +A + + + ++ TGG+ Sbjct: 18 LSVTDRCNFRCDYCMPKEIFGDDFVFLPKDELLTFDEMVR-IAQVYTQLGVKKIRITGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ L K++ L ++ V+ + Sbjct: 77 PLLRRD--LDKLIYQLNQLEGVEDI 99 >gi|302542868|ref|ZP_07295210.1| radical SAM [Streptomyces hygroscopicus ATCC 53653] gi|302460486|gb|EFL23579.1| radical SAM [Streptomyces himastatinicus ATCC 53653] Length = 321 Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 37/187 (19%), Positives = 67/187 (35%), Gaps = 32/187 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P L++ C + CR C+ G +S D + + + +V F GG+ Sbjct: 8 PQFAWLEITGFCNLNCRHCYANSSSQGDHG-DMSDADWIRVIDQL-NGLGVRDVQFIGGE 65 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIA-- 210 P L + L H ++ R+ + I PE+ + L G + + Sbjct: 66 P------TLHQSLPAFIRHAH----KYAMRIEVFSNMTHIRPEVWEALTLPGVRLAFSYY 115 Query: 211 --IHANHPYEFSEE------AIAAISRLANAGIILLSQSVL--LKGINDDPEILANLMRT 260 +H E +E A + + GI + SV+ L+G + AN Sbjct: 116 SDNETDH-DEVTEVRGSHARTRANVEKARELGIKMRG-SVIHVLEG-----QREANAHHE 168 Query: 261 FVELRIK 267 ++L I+ Sbjct: 169 LLQLGIR 175 >gi|83719624|ref|YP_441148.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia thailandensis E264] gi|167617973|ref|ZP_02386604.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia thailandensis Bt4] gi|257140190|ref|ZP_05588452.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia thailandensis E264] gi|123537978|sp|Q2T101|MIAB_BURTA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|83653449|gb|ABC37512.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia thailandensis E264] Length = 457 Score = 39.7 bits (92), Expect = 0.70, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 26/138 (18%) Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143 H P R+ + ++ C YC +C V S+ + L I Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQG 192 Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 + EV G + L + +++ + I ++ +R+ + P+ Sbjct: 193 VREVTLLGQNVNAYRGALTAGAHEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248 Query: 195 ELIQCLKEAGKPVYIAIH 212 L+ + K + +H Sbjct: 249 RLLDVYAKVPK-LVDHLH 265 >gi|296133089|ref|YP_003640336.1| protein of unknown function DUF512 [Thermincola sp. JR] gi|296031667|gb|ADG82435.1| protein of unknown function DUF512 [Thermincola potens JR] Length = 445 Score = 39.7 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 41/214 (19%), Positives = 75/214 (35%), Gaps = 47/214 (21%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 + + C C FCF +M + ++ D Y Q V T Sbjct: 80 ETATFDGITSCQNRCVFCFVDQMPAGMRKSLYIKDD-----DYRLSFLQGNFVTLT---- 130 Query: 155 LILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 L+ + +Q+++ L + + H+ P ++ L+ Sbjct: 131 -NLTAEAMQRIINMRLSPL----YISVHTTNP--------DLRVKMLRNKK--------- 168 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI------LANLMRTFVELRIK 267 + + + +LA+AGI + +Q VL GIND E+ L L + I Sbjct: 169 ------AARVMEQLQQLADAGIEMHTQIVLCPGINDGAELDRTLDDLTGLWPAVQSVAIV 222 Query: 268 PYYLHHPDLAAGTSHFR-LTIEEGQKIVASLKEK 300 P L AG + R +T EE + ++ + + Sbjct: 223 PVGLTGHR--AGLTELRTVTPEEARDLINRINSR 254 >gi|295399226|ref|ZP_06809208.1| RNA modification enzyme, MiaB family [Geobacillus thermoglucosidasius C56-YS93] gi|294978692|gb|EFG54288.1| RNA modification enzyme, MiaB family [Geobacillus thermoglucosidasius C56-YS93] Length = 451 Score = 39.7 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G ++ S+D + + Q+ + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEIIRQAQQLVNAGYKEIVLTG 196 Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + +L+ L + ++ LR S ++ +I E+I L+ + Sbjct: 197 IHTGGYGTD---MKDYNFAALLRDLDEQVVGLKRLRISS----IEASQITDEVIDVLRRS 249 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 250 DK-IVRHLHI 258 >gi|312110172|ref|YP_003988488.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y4.1MC1] gi|311215273|gb|ADP73877.1| RNA modification enzyme, MiaB family [Geobacillus sp. Y4.1MC1] Length = 451 Score = 39.7 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G ++ S+D + + Q+ + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEIIRQAQQLVNAGYKEIVLTG 196 Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + +L+ L + ++ LR S ++ +I E+I L+ + Sbjct: 197 IHTGGYGTD---MKDYNFAALLRDLDEQVVGLKRLRISS----IEASQITDEVIDVLRRS 249 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 250 DK-IVRHLHI 258 >gi|167579900|ref|ZP_02372774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia thailandensis TXDOH] Length = 457 Score = 39.7 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 26/138 (18%) Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143 H P R+ + ++ C YC +C V S+ + L I Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQG 192 Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 + EV G + L + +++ + I ++ +R+ + P+ Sbjct: 193 VREVTLLGQNVNAYRGALTAGAHEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248 Query: 195 ELIQCLKEAGKPVYIAIH 212 L+ + K + +H Sbjct: 249 RLLDVYAKVPK-LVDHLH 265 >gi|114797605|ref|YP_760268.1| molybdenum cofactor biosynthesis protein A [Hyphomonas neptunium ATCC 15444] gi|114737779|gb|ABI75904.1| molybdenum cofactor biosynthesis protein MoaA [Hyphomonas neptunium ATCC 15444] Length = 330 Score = 39.7 bits (92), Expect = 0.71, Method: Composition-based stats. Identities = 35/179 (19%), Positives = 63/179 (35%), Gaps = 32/179 (17%) Query: 99 LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L + VC C +C GS L++ + E + I +V TGG+P + Sbjct: 21 LSVTEVCNFRCTYCLPDGYRKTGSMD--FLAADEIERLVRAFTG-LGIRKVRLTGGEPTV 77 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 L +++ + V+ + + P+RI+ + L + Sbjct: 78 RKD--LTQLIARISATPGVEKVALTTNGWN-LPRRIDEWVGAGLTNLNVSI--------- 125 Query: 217 YEFSEEAIAAI---SRLAN--AGI---------ILLSQSVLLK-GINDDPEILANLMRT 260 EA I RLA+ AG+ + +VLL+ G+ +D +R Sbjct: 126 DSLDREAFHRITGHDRLADVLAGLECALALPLKTVKVNAVLLRDGLEEDFSSWTEFVRE 184 >gi|298291280|ref|YP_003693219.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM 506] gi|296927791|gb|ADH88600.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM 506] Length = 348 Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 23/165 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + + + ++ TGG+PL+ Sbjct: 33 VSVTDRCDFRCVYCMAEHMTFLPKPELLTLEELDRLCSAFVAR-GVRKLRLTGGEPLVRR 91 Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + L + L + ++ + + S++ R EL C K + +++ Sbjct: 92 DVMTLFRSLSRHLDS-GALEELTLTTNGSQL-----ARFASELADC---GVKRINVSLDT 142 Query: 214 NHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250 P F A I AGI + +V L+G N+D Sbjct: 143 LDPQRFRALTRWGDLNKVLAGIDAAQEAGIHVKLNAVALRGENED 187 >gi|322420929|ref|YP_004200152.1| hopanoid biosynthesis associated radical SAM protein HpnH [Geobacter sp. M18] gi|320127316|gb|ADW14876.1| hopanoid biosynthesis associated radical SAM protein HpnH [Geobacter sp. M18] Length = 332 Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 65/188 (34%), Gaps = 29/188 (15%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +YP ++L+ H+C + C C R T+ + L + E V Sbjct: 23 QEKYPLVLMLEPTHLCNLACSGCGRIR---EYADTIQEMMTLQECLNSVDECPAP-VVTI 78 Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 TGG+P + + +++ L+ KH+ + +++ + LK Sbjct: 79 TGGEPFLYP--HIFELIDAVLKRGKHIY---LCTNALLLEKA------LDTLKPHP-NFV 126 Query: 209 IAIHA-----NHPY--EFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEILANLM 258 + +H H E A+S + A G L + + + K N + L Sbjct: 127 LNVHLDGMEETHDRILERPGTFKIAMSAIKKAKALGFRLCTNTTIFKETN--LIEIEMLF 184 Query: 259 RTFVELRI 266 ++ + Sbjct: 185 SHLRDIGV 192 >gi|229118218|ref|ZP_04247576.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock1-3] gi|228665265|gb|EEL20749.1| Molybdenum cofactor biosynthesis protein A [Bacillus cereus Rock1-3] Length = 339 Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G +L+ + E + ++ TGG+ Sbjct: 20 ISVIDRCNFRCTYCMPAEVFGPDYAFLKDEFLLTFDEIERLAKVFVS-IGVRKIRLTGGE 78 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 PL+ L K++ L I + + + + + + LKEAG Sbjct: 79 PLLRKD--LTKLIACLVKIDGLVDIGLTTNAI-----HLTKQ-AKALKEAGLHRVNVSLD 130 Query: 212 --------HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + N ++ I I AG+ + V+ KG+ND Sbjct: 131 AIDDDTFRNINGRNINTKPVIKGIIAAKEAGLEVKVNMVVKKGMNDH 177 >gi|255658493|ref|ZP_05403902.1| molybdenum cofactor biosynthesis protein A [Mitsuokella multacida DSM 20544] gi|260849292|gb|EEX69299.1| molybdenum cofactor biosynthesis protein A [Mitsuokella multacida DSM 20544] Length = 329 Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 40/89 (44%), Gaps = 4/89 (4%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R + + + L C + CR+C E V + +L + + + + +V Sbjct: 6 QRKIEYVRISLTDRCNLRCRYCMPEEGVEKLRHEDILRFDEIVRIVRALAS-LGVRKVRL 64 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 TGG+PLI + + ++++ + + ++ + Sbjct: 65 TGGEPLI--RRNIVELVREIHAVPGIETI 91 >gi|207725239|ref|YP_002255635.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum MolK2] gi|206590473|emb|CAQ37435.1| molybdenum cofactor biosynthesis protein a [Ralstonia solanacearum MolK2] Length = 391 Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 7/77 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +++ +LS ++ E + E + ++ TGG+ Sbjct: 66 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMVRLFIEH-GVEKIRLTGGE 124 Query: 154 PLILSH-KRLQKVLKTL 169 PL+ +RL ++L L Sbjct: 125 PLLRKDIERLVEMLARL 141 >gi|94264027|ref|ZP_01287827.1| Radical SAM [delta proteobacterium MLMS-1] gi|93455538|gb|EAT05725.1| Radical SAM [delta proteobacterium MLMS-1] Length = 351 Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 65/216 (30%), Gaps = 35/216 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + ++ C + C C + ++ + + L I +Q V+ +GG+ Sbjct: 5 PKWLAWEITRRCNLNCVHCRSSSELEAKGHPDFDFTEAKRILDDITSYAQP-VVVLSGGE 63 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210 PL L + + LR + + E+ + LKE G + Sbjct: 64 PL-LRDDVFD-----IAAYGTEKGLRMC---LATNGTLVTDEVCRRLKEVGIRMVSMSLD 114 Query: 211 -----IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 +H N P F I A I L S K D + L + Sbjct: 115 GADAAVHDNFRSQPGAFDG-TINATRLFREHDIPFLFNSSFTKRNQADIPRVYRLAKEL- 172 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Y+ + G+ I++ L Sbjct: 173 --GATAWYMFM----------IVPTGRGEDILSELI 196 >gi|330685605|gb|EGG97251.1| YfkB-like domain protein [Staphylococcus epidermidis VCU121] Length = 380 Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 49/135 (36%), Gaps = 16/135 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 ++C + C C + ++ L L I + + TGG+P + S Sbjct: 35 FTTTNLCNMRCSHCAVGYTLQTKDPEPLPMDIIYRRLDEI---PNLRTLSITGGEP-MFS 90 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215 K ++ V+K L H + + + PQ ++ + + +H +H Sbjct: 91 KKSIKNVVKPLLKYAHQRGIYVQMNSNLTLPQDRYLDIAEYID--------VMHISHNWG 142 Query: 216 -PYEFSEEAIAAISR 229 EF++ A+ + Sbjct: 143 TIQEFTDVGFGAMKK 157 >gi|319650009|ref|ZP_08004158.1| coenzyme PQQ synthesis protein PqqE [Bacillus sp. 2_A_57_CT2] gi|317398190|gb|EFV78879.1| coenzyme PQQ synthesis protein PqqE [Bacillus sp. 2_A_57_CT2] Length = 375 Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 65/180 (36%), Gaps = 24/180 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ +L C + C C R E + LS + + + I+E + ++FTGGD Sbjct: 11 PFIVIWELTRACQLKCLHC-RAEAQYRRDPRELSFDEGKYLIDQIKEMNNPM-LVFTGGD 68 Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208 PL+ + + + +R S P P + E I+ KE G + Sbjct: 69 PLMRQDVFDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIEKAKEVGLARWAFSL 119 Query: 209 ------IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 I H F I I L I + +V+ + D E +A ++ Sbjct: 120 DGPKAEIHDHFRGTAGSFD-LTIERIKYLHELEIPVQINTVISRYNIDYLEEMAKVVEEL 178 >gi|292491535|ref|YP_003526974.1| molybdenum cofactor biosynthesis protein A [Nitrosococcus halophilus Nc4] gi|291580130|gb|ADE14587.1| molybdenum cofactor biosynthesis protein A [Nitrosococcus halophilus Nc4] Length = 335 Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 8/89 (8%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G + + +L+ ++ + I + +V TGG+ Sbjct: 16 VSVTDRCNFRCPYCMPKEIYGRKWAFLPRNELLTFEEISRLVR-IFVTLGVEKVRLTGGE 74 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS 182 PL+ L+++++ L I+ +Q L + Sbjct: 75 PLLRQD--LEQLVRMLASIEALQDLTLTT 101 >gi|302873840|ref|YP_003842473.1| Radical SAM domain-containing protein [Clostridium cellulovorans 743B] gi|307689915|ref|ZP_07632361.1| Radical SAM domain-containing protein [Clostridium cellulovorans 743B] gi|302576697|gb|ADL50709.1| Radical SAM domain protein [Clostridium cellulovorans 743B] Length = 467 Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 70/182 (38%), Gaps = 43/182 (23%) Query: 82 NHSPLKGIVHRY--PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 ++P+ RY P+ ++L L +VC C +C GS+ LS D + Sbjct: 122 QYNPV-----RYESPEELVLSLSYVCNHKCIYCCNS--SGSRIEDELSFNDWIKVIDE-A 173 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR------VPIVDPQRIN 193 + ++F+GG+PL+ +IK V+ ++ + + I+ Sbjct: 174 ADLGVETILFSGGEPLMYPD-----------FIKLVKR----TKDNGIYPIVSTNGTLIS 218 Query: 194 PELIQCLKEAGKPVYIAIHANHPYE------FS-----EEAIAAISRLANAGIILLSQSV 242 E + L EAG ++ + + E + AAI L + I + + V Sbjct: 219 EETAKQLSEAGID-FVHLSMSAANEELYDSIIGYKGNLPKVKAAIKALKDNNIYIRLKVV 277 Query: 243 LL 244 L+ Sbjct: 278 LM 279 >gi|148262099|ref|YP_001228805.1| radical SAM domain-containing protein [Geobacter uraniireducens Rf4] gi|146395599|gb|ABQ24232.1| Radical SAM domain protein [Geobacter uraniireducens Rf4] Length = 357 Score = 39.7 bits (92), Expect = 0.72, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 75/221 (33%), Gaps = 42/221 (19%) Query: 94 PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 P I + C + C C EM S+ ++++ + L I + S+ V+ +GG Sbjct: 7 PKWIAWETTQKCNLKCVHCRCSSEMTSSEGD--FTTEEGKKLLKEIADFSKP-VVVLSGG 63 Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVY-- 208 +PL+ L +L R+ + + E+ + +KEA + Sbjct: 64 EPLMRKDIFELAGYGTSL-----------GLRMCMASNGALVTDEVCEKMKEADIKMVSL 112 Query: 209 ------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 A+H N P F AA G L S K + +AN + Sbjct: 113 SLDGSTAAVHDNFRQCPGSFDGVVRAA-ELFRKHGQKFLINSSFTK---RNQADIANTFK 168 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 L +Y+ + G++I++ L K Sbjct: 169 VAKSLGATAWYMFM----------IVPTGRGEEIMSELISK 199 >gi|225850334|ref|YP_002730568.1| molybdenum cofactor biosynthesis protein A [Persephonella marina EX-H1] gi|225645594|gb|ACO03780.1| molybdenum cofactor biosynthesis protein A [Persephonella marina EX-H1] Length = 321 Score = 39.7 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 46/109 (42%), Gaps = 13/109 (11%) Query: 99 LKLLHVCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C + C +C E V +L ++ + + + + +V TGG+PL+ Sbjct: 8 VSVTDKCNLKCFYCRPDNSEFV--PHDEILRYEEIARLVKAMTKY-GLRKVRITGGEPLV 64 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +L++++K L+ I + + + + + L++AG Sbjct: 65 --RPQLEELVKMLKDIPQINDISLTTNAIT------LSKHAEKLRKAGL 105 >gi|154706007|ref|YP_001424838.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella burnetii Dugway 5J108-111] gi|229890504|sp|A9KCP2|MIAB_COXBN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|154355293|gb|ABS76755.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii Dugway 5J108-111] Length = 439 Score = 39.7 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 19/125 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD- 153 + ++ C YC FC V S+ + +A + + + E+ G + Sbjct: 148 AFVSIMEGCSKYCTFC-----VVPYTRGEEISRPFDDVIAEVASLCEQGVREITLLGQNV 202 Query: 154 ---PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 ++ + L ++ L + +++ +RF + P + LI E K + Sbjct: 203 NDYCGLMHDGQVADLALLIHYLAAMDNIERIRFTTSHPSA----FSENLIDAYAEEPK-L 257 Query: 208 YIAIH 212 +H Sbjct: 258 ANHLH 262 >gi|154501155|ref|ZP_02039193.1| hypothetical protein BACCAP_04845 [Bacteroides capillosus ATCC 29799] gi|150269847|gb|EDM97382.1| hypothetical protein BACCAP_04845 [Bacteroides capillosus ATCC 29799] Length = 434 Score = 39.7 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 57/160 (35%), Gaps = 24/160 (15%) Query: 64 KEELNILPEEREDPIGDN---NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 + E ++PE D I + P G+ R R +LK+ C +C +C G Sbjct: 115 RAEAELVPEMLVDNIMTHRSFEQLPAGGLEGR--TRAMLKVEDGCVNFCTYCIIPYARGP 172 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR-------LQKVLKTLRYIK 173 + LS E A + + E++ TG + I S L +++ + + Sbjct: 173 VRSLALS-AAVEQAKK-LAQD-GYREIVLTGIE--ISSWGHEFKDGTSLIDLVEGICHAV 227 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 +R S ++P+ I + + + H Sbjct: 228 PDLRVRLGS----LEPRTITEDFCRRAAALPN---LCPHF 260 >gi|152974529|ref|YP_001374046.1| coproporphyrinogen III oxidase [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152023281|gb|ABS21051.1| Coproporphyrinogen dehydrogenase [Bacillus cytotoxicus NVH 391-98] Length = 495 Score = 39.7 bits (92), Expect = 0.73, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 65/155 (41%), Gaps = 15/155 (9%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDTEAALAY 137 S + + + + + CP C +C F + ++G+V S + A+ Sbjct: 159 SVIPDLYRLKEEVSIYIGIPFCPTKCAYCTFPAYAINGRQGSVDSFLGGLHYEIREIGAF 218 Query: 138 IQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPE 195 ++EK ++ + + GG P ++ + + + + + +V+ +R + V P I PE Sbjct: 219 LKEKGIKVTTIYYGGGTPTSITAEEMDMLYEQMYESFPNVENVREVT-VEAGRPDTITPE 277 Query: 196 LIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 ++ L + + I P + +E + AI R Sbjct: 278 KLEVLNKWNIDRISIN-----PQSYHQETLKAIGR 307 >gi|304373805|ref|YP_003858550.1| NrdG anaerobic nucleotide reductase subunit [Enterobacteria phage RB16] gi|299829761|gb|ADJ55554.1| NrdG anaerobic nucleotide reductase subunit [Enterobacteria phage RB16] Length = 163 Score = 39.7 bits (92), Expect = 0.74, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 37/77 (48%), Gaps = 3/77 (3%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R++L + C C C+ R + GT + ++TE L + + + TGGDP Sbjct: 18 RVVLFVTG-CNHKCEGCYNRSTWNPRNGTPYT-EETENELIKLLSNPHVDGLTLTGGDPF 75 Query: 156 ILSHK-RLQKVLKTLRY 171 ++ +L K+L+ +R Sbjct: 76 YRTNHPKLLKLLQRVRA 92 >gi|205351955|ref|YP_002225756.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|207856135|ref|YP_002242786.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|229890644|sp|B5QWC1|MIAB_SALEP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|229890645|sp|B5R817|MIAB_SALG2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|205271736|emb|CAR36570.1| MiaB protein (putative tRNA-thiotransferase (or tRNA-methylthiotransferase)) [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|206707938|emb|CAR32227.1| MiaB protein (putative tRNA-thiotransferase (or tRNA-methylthiotransferase)) [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|326626994|gb|EGE33337.1| (Dimethylallyl)adenosine tRNA methylthiotransferase miaB [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 474 Score = 39.7 bits (92), Expect = 0.74, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 63/186 (33%), Gaps = 33/186 (17%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154 + ++ C YC +C G + S D +A + + + EV G + Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAAQ-GVREVNLLGQNVN 204 Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLK- 201 + +L+ + I + +RF + P I++ R PEL+ L Sbjct: 205 AWRGENYDGTTGTFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264 Query: 202 --EAGKPVYIA----IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI----NDDP 251 ++G + H + E A I +L A + S + G NDD Sbjct: 265 PVQSGSDRVLNLMGRTHT------ALEYKAIIRKLRAARPDIQISSDFIVGFPGETNDDF 318 Query: 252 EILANL 257 E L Sbjct: 319 EKTMKL 324 >gi|150002891|ref|YP_001297635.1| involved moaA/nifB/pqqE family protein, involved in molybdenum cofactor biosynthesis [Bacteroides vulgatus ATCC 8482] gi|319642417|ref|ZP_07997069.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 3_1_40A] gi|149931315|gb|ABR38013.1| involved moaA/nifB/pqqE family protein, involved in molybdenum cofactor biosynthesis [Bacteroides vulgatus ATCC 8482] gi|317385947|gb|EFV66874.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 3_1_40A] Length = 498 Score = 39.7 bits (92), Expect = 0.74, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 39/192 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156 L + C +C++C + S T+ + I+E Q+ +V GG+ + Sbjct: 146 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 200 Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212 ++ +LK L R I +++P+ +L+Q ++E G V I++ Sbjct: 201 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 249 Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261 A H + E + + L ++G+ SVL N +LA L+ Sbjct: 250 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQVNVLAELLHELS 308 Query: 262 -----VELRIKP 268 + RI P Sbjct: 309 HLKHIRDWRIIP 320 >gi|212712166|ref|ZP_03320294.1| hypothetical protein PROVALCAL_03248 [Providencia alcalifaciens DSM 30120] gi|212685213|gb|EEB44741.1| hypothetical protein PROVALCAL_03248 [Providencia alcalifaciens DSM 30120] Length = 326 Score = 39.7 bits (92), Expect = 0.74, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 59/162 (36%), Gaps = 21/162 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + VC C +C S + L+ + E +V TGG+P + Sbjct: 17 LSITDVCNFRCTYCLPDGYKPSGRHEFLTLDEIRRVSRAFAE-LGTEKVRITGGEPTMRK 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216 ++ ++ ++ + + R+ ++ ++AG + + + P Sbjct: 76 D--FTDIIAAIKENDSIKKI-----AVTTNGYRMARDVQAW-RDAGLN-AVNVSVDSLDP 126 Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGIND 249 +F+ + + I +AG + +VL+K +ND Sbjct: 127 RQFAAITGQDKFFQVMKGIDAAFDAGFDKVKVNAVLMKNVND 168 >gi|186680946|ref|YP_001864142.1| nitrogenase cofactor biosynthesis protein NifB [Nostoc punctiforme PCC 73102] gi|186463398|gb|ACC79199.1| nitrogenase cofactor biosynthesis protein NifB [Nostoc punctiforme PCC 73102] Length = 483 Score = 39.7 bits (92), Expect = 0.74, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 71/222 (31%), Gaps = 61/222 (27%) Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MV 118 E + P ED H Y R+ + + C + C +C R+ Sbjct: 43 ERIAKHPCYSEDA------------HHHYA-RMHVAVAPACNIQCNYCNRKYDCANESRP 89 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHK----------------- 160 G + + AL + Q+ V G GDPL K Sbjct: 90 GVVSELLTPEEAAHKALVIGGKIPQMTVVGIAGPGDPLANPEKTFRTFELIAAQAPDIKL 149 Query: 161 -------RLQKVLKTLRY--IKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVY 208 L + ++ I HV + + +VDP+ +I P + ++ + + Sbjct: 150 CLSTNGLMLPDYIDRIKQLNIDHV-TITIN----MVDPEIGAKIYP-WVHYRRKRYRGLE 203 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H + + L +A I+ SV++ GIND Sbjct: 204 -GAKILHERQM-----EGLQALKDADILCKVNSVMIPGINDH 239 >gi|307331899|ref|ZP_07610996.1| Radical SAM domain protein [Streptomyces violaceusniger Tu 4113] gi|306882464|gb|EFN13553.1| Radical SAM domain protein [Streptomyces violaceusniger Tu 4113] Length = 386 Score = 39.7 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 47/125 (37%), Gaps = 12/125 (9%) Query: 96 RILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-----EV 147 +LK+ + C + C +C+ ++ +S + A I E + V Sbjct: 12 TFILKVANRCNIDCDYCYVFNSKDQSSRHLPARMSLEVARATAQRIGEHAAANGMREVHV 71 Query: 148 IFTGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 + GG+PL+ + + +L T L I +RF + + + + G Sbjct: 72 VLHGGEPLLAGPQHMAGLLSTVLEAIPPTTDVRFELQTNGTL---LTEAWLNLFERYGVA 128 Query: 207 VYIAI 211 V I++ Sbjct: 129 VGISL 133 >gi|298373288|ref|ZP_06983277.1| translation initiation factor IF-1 [Bacteroidetes oral taxon 274 str. F0058] gi|298274340|gb|EFI15892.1| translation initiation factor IF-1 [Bacteroidetes oral taxon 274 str. F0058] Length = 72 Score = 39.7 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ ++ G +I+ ISG + YI LPG KV++ +++ K G Sbjct: 22 FRVQLQNGHEII----AHISGKMRMHYIRILPGDKVKVEMSPYDLSK---GRISFR 70 >gi|257066928|ref|YP_003153184.1| molybdenum cofactor biosynthesis protein A [Anaerococcus prevotii DSM 20548] gi|256798808|gb|ACV29463.1| molybdenum cofactor biosynthesis protein A [Anaerococcus prevotii DSM 20548] Length = 312 Score = 39.7 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 35/169 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAY--IQEKSQIWEVIFTGGD 153 + + C C++C G +L +D E + I I ++ TGG+ Sbjct: 14 ISVTDRCNFRCKYCM-----GEDGIKLLRHEDILTFEEIVETAQIMAGLGIRKIRLTGGE 68 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--------- 204 P + + + ++K L I ++ L + +V + ++ LKE G Sbjct: 69 PF--ARRGVMDLIKKLSQIPEIEDLAITTNGSMVY------DKLESLKEYGISRINFSLD 120 Query: 205 ----KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 + + A+ E AI + + VL+KG ND Sbjct: 121 TLDREKFKLITGADLLEEVKRTIFKAIELDFKVKVNI----VLIKGFND 165 >gi|255322795|ref|ZP_05363937.1| radical SAM domain protein [Campylobacter showae RM3277] gi|255300137|gb|EET79412.1| radical SAM domain protein [Campylobacter showae RM3277] Length = 275 Score = 39.7 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 36/184 (19%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQE----KSQIWEVI 148 R+ L + C + C FC R ++ ++ + + A Y++ + I + Sbjct: 24 GRVHLPVAPNCNIQCNFCNRIYDCANENRPGVTGRVQSPDEAALYVENLFKFRQDISVIG 83 Query: 149 FTG-GDPLILSHKRLQKV---------------LKTLRYIKHV-QILRFHSRVPIVDPQR 191 G GDP+ + K L L +HV I+R V Sbjct: 84 IAGPGDPMCDADKTLATFEKCKARFPHALLCLSTNGLSLPEHVDDIVRIGVSHVTVTVNA 143 Query: 192 INPELIQCLKEAGKPVYIAIHANH-------PYEFSEEAIAAISRLANAGIILLSQSVLL 244 + P++ GK H N E I +L A +I+ +V++ Sbjct: 144 VTPDV------GGKIYAWVRHKNKIYRGEDGARILGERQEEGIRKLKEARMIVKINTVVI 197 Query: 245 KGIN 248 G+N Sbjct: 198 PGVN 201 >gi|239813975|ref|YP_002942885.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Variovorax paradoxus S110] gi|239800552|gb|ACS17619.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Variovorax paradoxus S110] Length = 454 Score = 39.7 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 24/129 (18%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151 + ++ C YC +C V ++ + L I + EV G Sbjct: 146 TAFVSIMEGCSKYCSYC-----VVPYTRGEEVNRPLDDVLVEIAGLADQGVREVTLLGQN 200 Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 GD ++ L +++ + I ++ +R+ + P P LI+ + Sbjct: 201 VNAYRGRMGDTAEIADFAL--LIEYVAEIPGIERIRYTTSH----PNEFTPRLIEAYAKV 254 Query: 204 GKPVYIAIH 212 + +H Sbjct: 255 P-QLVSHLH 262 >gi|152976740|ref|YP_001376257.1| RNA modification protein [Bacillus cereus subsp. cytotoxis NVH 391-98] gi|152025492|gb|ABS23262.1| RNA modification enzyme, MiaB family [Bacillus cytotoxicus NVH 391-98] Length = 450 Score = 39.7 bits (92), Expect = 0.75, Method: Composition-based stats. Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 19/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C FC G + + + + A + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDGKEVIKQAQQLVDA--GYKEIVLTGIH 198 Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + L +L+ + +K ++ LR S ++ +I+ E+I+ L ++ K Sbjct: 199 TGGYGED---MKDYNLAGLLRDMEAEVKGLKRLRISS----IEASQISDEVIEVLDKS-K 250 Query: 206 PVYIAIHA 213 V +H Sbjct: 251 VVVRHLHI 258 >gi|294674416|ref|YP_003575032.1| Fe-S oxidoreductase [Prevotella ruminicola 23] gi|294471976|gb|ADE81365.1| putative Fe-S oxidoreductase [Prevotella ruminicola 23] Length = 445 Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 15/61 (24%), Positives = 23/61 (37%), Gaps = 3/61 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + L + C + C CF R G L + L + V F+GG+PL+ Sbjct: 107 IYLTNACNLRCEHCFMR--SGKPLDNELPKTEWLRILTEF-QHQGGKSVTFSGGEPLMNR 163 Query: 159 H 159 Sbjct: 164 D 164 >gi|239977822|ref|ZP_04700346.1| hypothetical protein SalbJ_00205 [Streptomyces albus J1074] gi|291449746|ref|ZP_06589136.1| predicted protein [Streptomyces albus J1074] gi|291352695|gb|EFE79597.1| predicted protein [Streptomyces albus J1074] Length = 365 Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 47/148 (31%), Gaps = 19/148 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L+ L CP+ C C G + D +A + + ++ TGG+PL+ Sbjct: 17 VLVTLTRRCPLSCAHCSTG--SGPDTDERPAPGDLRRLVASFTPRDRPDVMMLTGGEPLL 74 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-- 214 + +++ L + +R V + + H + Sbjct: 75 MP-----GLVRELALSAKEK----GTRT-AVLSGMFFARARSVPRAVLRAAEAVDHFSAS 124 Query: 215 ----HPYEF-SEEAIAAISRLANAGIIL 237 H E AA+ L+ G + Sbjct: 125 LDLHHEREVPRAAVFAALRALSTTGTRV 152 >gi|167747917|ref|ZP_02420044.1| hypothetical protein ANACAC_02647 [Anaerostipes caccae DSM 14662] gi|167652648|gb|EDR96777.1| hypothetical protein ANACAC_02647 [Anaerostipes caccae DSM 14662] Length = 312 Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 37/182 (20%), Positives = 73/182 (40%), Gaps = 22/182 (12%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVY-CRFC-FRREMVGSQKGTVL 126 E + + + +G+V+R P ++++ C C FC +E + Sbjct: 12 ENKTESYQEERQMEYEGMVYRPPSEAYSLIIQVTIGCSQNDCIFCNMYKEKRFRMRPLQD 71 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILR-FHSRV 184 D A Y + I ++ GD LI ++ L ++LK +R I + + + S Sbjct: 72 VLADFREAREY---YNSIGKIFLADGDALICKNEYLNEILKYIREEIPECRQVTCYASPK 128 Query: 185 PIVDPQRINPELIQCLKEAGKP-VYIAIHANHPYEF-------SE-EAIAAISRLANAGI 235 ++ E ++ L+E G VY+ + + + + E I + S++ AGI Sbjct: 129 SVMIK---TKEELRELRENGLDMVYMGLESGNAQVLKFMKKGATPDEMIQSASKIKQAGI 185 Query: 236 IL 237 L Sbjct: 186 RL 187 >gi|45658385|ref|YP_002471.1| hypothetical protein LIC12543 [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|81567903|sp|Q72PC8|RIMO_LEPIC RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|45601628|gb|AAS71108.1| conserved hypothetical protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 437 Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 32/158 (20%), Positives = 59/158 (37%), Gaps = 25/158 (15%) Query: 56 IARQFIPQKEELNILPEEREDPIGD--NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113 I R+ P EL+ E D + + S ++ Y +K+ C C FC Sbjct: 112 ILREKFP---ELSPSQLEFNDSLLERWKLSSKIENYSKPY---AYVKVSDGCNRGCSFCI 165 Query: 114 RREMVGSQKGTVLSS--KDTEAALAYIQEKSQI----WEVIFTGGDPLILSHKRLQKVLK 167 G + L +DT A+ +I + ++ G D + L +++ Sbjct: 166 IPSFRGKFAESPLDDILRDTNRAIR--AGAKEICLVSQDTVYYGRDS-----EILLDMVR 218 Query: 168 TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + I ++ILR + P + +LI+ + E K Sbjct: 219 KVAEIDSLEILRL----LYLYPDKKTEKLIRLMGETSK 252 >gi|329961551|ref|ZP_08299632.1| radical SAM domain protein [Bacteroides fluxus YIT 12057] gi|328531763|gb|EGF58592.1| radical SAM domain protein [Bacteroides fluxus YIT 12057] Length = 458 Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 44/233 (18%), Positives = 85/233 (36%), Gaps = 40/233 (17%) Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---K 141 P + D + L + H C + C++CF + + +V+S A+AY+ E Sbjct: 72 PSACCEKQKQDMLTLNVTHGCNMSCKYCFASTL--QDRKSVMSLSVVRKAIAYMLEGNPD 129 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINP 194 S+ + + F GG+PL+ ++ ++ + I +I+ SR + + I+ Sbjct: 130 SERYTIYFFGGEPLLH-----KQFVRDVVEIAKEEII---SRRNKDVCFLLNTNGTLIDD 181 Query: 195 ELIQCLKEAGKPVYIAI----HANHPYEF-------SEEAIAAISRLANAGIILLSQSVL 243 +++ + V ++I N + I RL G+ + L Sbjct: 182 DMMNFFVQEKFTVTVSIDGPQKMNDANRVFLNGRGSFRRIVENIERLKKRGVN-FN---L 237 Query: 244 LKGINDDPEILANLMRTFVELRIKPY-YLHHPD---LAAGTSHFRLTIEEGQK 292 I+ L R F + + PY Y D T+HF + Sbjct: 238 RATISPKNTRLLETFRFFESMEV-PYSYAFTIDSDVKDRSTTHFDTNGIKAID 289 >gi|313499923|gb|ADR61289.1| Molybdenum cofactor synthesis domain-containing protein [Pseudomonas putida BIRD-1] Length = 322 Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C +C + +V +Q LS+ +AY+ E + I + TGG+PL+ Sbjct: 15 VSLTAACNYACTYCVPDGKRLVAAQDE--LSADALARGVAYLIEAAGIERLRITGGEPLV 72 Query: 157 LSHKRLQKVLKTLRYIK 173 RL L + + Sbjct: 73 SP--RLDAFLAAVAKLD 87 >gi|282163323|ref|YP_003355708.1| probable molybdenum cofactor biosynthesis protein A [Methanocella paludicola SANAE] gi|282155637|dbj|BAI60725.1| probable molybdenum cofactor biosynthesis protein A [Methanocella paludicola SANAE] Length = 312 Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 39/179 (21%), Positives = 73/179 (40%), Gaps = 30/179 (16%) Query: 87 KGIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKS 142 + +V Y R+ + L + C + C +C G G ++ + + I K Sbjct: 3 ESLVDNYGRRVTSLRMSLTNRCNLQCIYC---HNEGESGSGGEITVDEIARLVR-IATKY 58 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + V F+GG+PL+ + L+ +L+ L ++ + + ++ P+ + LKE Sbjct: 59 GVDRVKFSGGEPLLRTD--LEDILRAL---PPLKDISLTTNGTLLAPR------AKGLKE 107 Query: 203 AGK-PVYIAIHANHPYEFSEEAIAA---------ISRLANAGI-ILLSQSVLLKGINDD 250 AG V I++ F I+ +AG+ + V LKGIN+D Sbjct: 108 AGLDRVNISLDTMDSGRFDLITQRKGQFSRVMDGINAAIDAGLTPVKLNMVYLKGINED 166 >gi|237748413|ref|ZP_04578893.1| molybdenum cofactor biosynthesis protein A [Oxalobacter formigenes OXCC13] gi|229379775|gb|EEO29866.1| molybdenum cofactor biosynthesis protein A [Oxalobacter formigenes OXCC13] Length = 372 Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 53/128 (41%), Gaps = 23/128 (17%) Query: 55 PIARQFIPQKEELNILPE----EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 PI RQ P E+ + PE P+ D PLK + + + C C Sbjct: 9 PILRQENP---EMPVRPEIILPAMSIPVLDRLERPLKDLR--------ISVTDRCNFRCV 57 Query: 111 FCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 +C +++ G +LS ++ + + ++ TGG+PL+ K ++++ Sbjct: 58 YCMPKQVFGKDFRFIPHSDMLSFEEIARLARLFVAR-GVEKIRLTGGEPLL--RKNVERL 114 Query: 166 LKTLRYIK 173 ++ L +K Sbjct: 115 IEQLSRLK 122 >gi|257066655|ref|YP_003152911.1| RNA modification enzyme, MiaB family [Anaerococcus prevotii DSM 20548] gi|256798535|gb|ACV29190.1| RNA modification enzyme, MiaB family [Anaerococcus prevotii DSM 20548] Length = 431 Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 44/118 (37%), Gaps = 16/118 (13%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 R +K+ C +YC +C G+ + K+ + ++ E++ TG Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNIASRDMDSIKKEAKRL-----AQNGYKEIVLTGI 196 Query: 153 DPLILSHK-----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L V++ + ++ +R S ++P+ I + ++ +K K Sbjct: 197 HVASYGKDLRNGTSLIDVIEEVSKTDGIERIRLSS----MEPRHITRDFLERMKATEK 250 >gi|126172537|ref|YP_001048686.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica OS155] gi|152998830|ref|YP_001364511.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica OS185] gi|217971490|ref|YP_002356241.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica OS223] gi|125995742|gb|ABN59817.1| GTP cyclohydrolase subunit MoaA [Shewanella baltica OS155] gi|151363448|gb|ABS06448.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica OS185] gi|217496625|gb|ACK44818.1| molybdenum cofactor biosynthesis protein A [Shewanella baltica OS223] Length = 337 Score = 39.7 bits (92), Expect = 0.76, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 17/160 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + VC C +C K LS + ++ + ++ TGG+P + Sbjct: 28 MSVTDVCNFKCSYCLPDGYHPDGKPKFLSLNEIANLVSAFSQ-VGTQKIRITGGEPTLRK 86 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217 +++ + R H+ + R+ + + + +++ + P Sbjct: 87 D--FTDIIRVVADNP-----RIHTIATTTNGYRLEKHAKEWFDAGLRRINVSVDSLDPKM 139 Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249 + + E + I +AG + +VLLKG+ND Sbjct: 140 FYQITGENKFDEVMRGIDAALSAGFERVKINAVLLKGLND 179 >gi|317124847|ref|YP_004098959.1| GTP cyclohydrolase subunit MoaA [Intrasporangium calvum DSM 43043] gi|315588935|gb|ADU48232.1| GTP cyclohydrolase subunit MoaA [Intrasporangium calvum DSM 43043] Length = 350 Score = 39.7 bits (92), Expect = 0.77, Method: Composition-based stats. Identities = 26/170 (15%), Positives = 59/170 (34%), Gaps = 36/170 (21%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E + + +LS ++ + + +V TGG+PL+ Sbjct: 37 VSVTDRCNLRCTYCMPAEGLPWMPQAEMLSDEEMLRLIGLFVRD-GVTQVRLTGGEPLL- 94 Query: 158 SHKRLQKVLKTLRYIKHVQIL----------RFHSRV-------PIVDPQRINPELIQCL 200 + L ++ + ++ + R R+ V I+ E L Sbjct: 95 -RRSLVDLVAGIASLEPRPRIAMTTNGVGLDRIAHRLAAAGLDRVNVSLDTIDSETFTRL 153 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGIND 249 + + + A+AG+ + +V ++G+ND Sbjct: 154 TRRDR--------------LPDVELGLKAAADAGLTPVKVNAVAMRGVND 189 >gi|197119727|ref|YP_002140154.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] gi|197089087|gb|ACH40358.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase, DUF3463-containing protein [Geobacter bemidjiensis Bem] Length = 332 Score = 39.7 bits (92), Expect = 0.77, Method: Composition-based stats. Identities = 32/188 (17%), Positives = 68/188 (36%), Gaps = 29/188 (15%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +YP ++L+ H+C + C C R ++S + L + E V Sbjct: 23 IEKYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMS---LKQCLDSVDECPAP-VVTI 78 Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 TGG+P + + ++++ L KH+ + +++ + +K + Sbjct: 79 TGGEPFLYP--HIFQLIEKVLERGKHIY---LCTNALLLEKA------LDSMKPHP-NLV 126 Query: 209 IAIHA-----NHPY--EFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEILANLM 258 I +H H E A+S + A G L + + + K D + L Sbjct: 127 INVHMDGMEETHDRILERPGTFKIAMSAIRKAKQLGFRLCTNTTIFK--ETDLIEIEMLF 184 Query: 259 RTFVELRI 266 ++ + Sbjct: 185 SHLKDIGV 192 >gi|330909553|gb|EGH38067.1| radical SAM family protein HutW [Escherichia coli AA86] Length = 419 Score = 39.7 bits (92), Expect = 0.77, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148 +R++ + C +C FC F + + ++ E A + + + I V Sbjct: 30 RNRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSGPIHAVY 89 Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 F GG P LS L +++ TLR + + RV D +RI+ Sbjct: 90 FGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138 >gi|298290897|ref|YP_003692836.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM 506] gi|296927408|gb|ADH88217.1| molybdenum cofactor biosynthesis protein A [Starkeya novella DSM 506] Length = 348 Score = 39.7 bits (92), Expect = 0.77, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 63/165 (38%), Gaps = 23/165 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + + + ++ TGG+PL+ Sbjct: 33 VSVTDRCDFRCVYCMAEHMTFLPKPELLTLEELDRLCSAFVAR-GVRKLRLTGGEPLVRR 91 Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + L + L + ++ + + S++ R EL C K + +++ Sbjct: 92 DVMTLFRSLSRHLDS-GALEELTLTTNGSQL-----ARFASELADC---GVKRINVSLDT 142 Query: 214 NHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250 P F A I AGI + +V L+G N+D Sbjct: 143 LDPQRFRALTRWGDLSKVLAGIDAAQAAGIHVKLNAVALRGENED 187 >gi|158604990|gb|EAT98763.2| asparate kinase, monofunctional class [Campylobacter concisus 13826] Length = 400 Score = 39.7 bits (92), Expect = 0.77, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 23/166 (13%) Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 IFT D + + R++K K L I + ++L S V R ++ K+ + Sbjct: 171 IFTDVDGVYTTDPRIEKKAKKLEKISYDEMLELASAGAKVLQNR----SVELAKKLNVKL 226 Query: 208 YIAIHANHPYEFSEEAIA-AISRLANAGIIL-LSQS-VLLKGINDDPEILANLMRTFVEL 264 NH E + A + + +GI L +Q+ V L+G+ D P I A + Sbjct: 227 ITRSSFNH-NEGTLIAKEDNMEAVLVSGIALDKNQARVTLRGVVDKPGIAAEIFTALAHQ 285 Query: 265 RIKPYYLHHPDL-AAGTSH-------FRLTIEEGQKIVASLKEKIS 302 I + D+ H F + E + +K+S Sbjct: 286 NI------NVDMIIQNVGHDGTTNLGFTVPQNE-LDLAKETMQKLS 324 >gi|157163983|ref|YP_001467151.1| aspartate kinase [Campylobacter concisus 13826] Length = 399 Score = 39.7 bits (92), Expect = 0.77, Method: Composition-based stats. Identities = 36/166 (21%), Positives = 62/166 (37%), Gaps = 23/166 (13%) Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 IFT D + + R++K K L I + ++L S V R ++ K+ + Sbjct: 170 IFTDVDGVYTTDPRIEKKAKKLEKISYDEMLELASAGAKVLQNR----SVELAKKLNVKL 225 Query: 208 YIAIHANHPYEFSEEAIA-AISRLANAGIIL-LSQS-VLLKGINDDPEILANLMRTFVEL 264 NH E + A + + +GI L +Q+ V L+G+ D P I A + Sbjct: 226 ITRSSFNH-NEGTLIAKEDNMEAVLVSGIALDKNQARVTLRGVVDKPGIAAEIFTALAHQ 284 Query: 265 RIKPYYLHHPDL-AAGTSH-------FRLTIEEGQKIVASLKEKIS 302 I + D+ H F + E + +K+S Sbjct: 285 NI------NVDMIIQNVGHDGTTNLGFTVPQNE-LDLAKETMQKLS 323 >gi|254884451|ref|ZP_05257161.1| moaA/nifB/pqqE family protein [Bacteroides sp. 4_3_47FAA] gi|254837244|gb|EET17553.1| moaA/nifB/pqqE family protein [Bacteroides sp. 4_3_47FAA] Length = 503 Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 39/192 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156 L + C +C++C + S T+ + I+E Q+ +V GG+ + Sbjct: 151 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 205 Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212 ++ +LK L R I +++P+ +L+Q ++E G V I++ Sbjct: 206 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 254 Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261 A H + E + + L ++G+ SVL N +LA L+ Sbjct: 255 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQVNVLAELLHELS 313 Query: 262 -----VELRIKP 268 + RI P Sbjct: 314 HLKHIRDWRIIP 325 >gi|169829242|ref|YP_001699400.1| hypothetical protein Bsph_3790 [Lysinibacillus sphaericus C3-41] gi|168993730|gb|ACA41270.1| UPF0004 protein [Lysinibacillus sphaericus C3-41] Length = 432 Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 13/125 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149 R LK+ C +C FC G + + + Y++ Sbjct: 130 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPQEVLHQAQQLVDAGYLEIVLTGIHTGG 189 Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 G D L L ++L+ L + ++ LR S ++ ++ E+I L+E+ K V Sbjct: 190 YGQD---LKDYNLAQLLRDLEANVTGLKRLRISS----IEASQLTDEVIDVLRES-KIVV 241 Query: 209 IAIHA 213 +H Sbjct: 242 NHLHI 246 >gi|331655124|ref|ZP_08356123.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli M718] gi|331047139|gb|EGI19217.1| putative oxygen independent coproporphyrinogen III oxidase [Escherichia coli M718] Length = 445 Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 24/167 (14%) Query: 39 LTPVIANLINPHNP-NDPIARQFIPQKEELNILPEEREDPIGD---NNHSPLKGIVHRYP 94 LTP A ++ P D R +P + + + E+ + SP Sbjct: 9 LTPHFA--LDGDQPFKD--RRAMMPFRGAIPVAKEQLAQTWQEMINQTASP--------R 56 Query: 95 DRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIF 149 R++ + C +C FC F + + ++ E A + + + + I V F Sbjct: 57 KRLVYLHIPFCATHCTFCGFYQNRFDEDACAHYTDALIREIEMEADSVLHQSAPIHAVYF 116 Query: 150 TGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRIN 193 GG P LS L +++ TLR + + RV D +RI+ Sbjct: 117 GGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERID 163 >gi|295109586|emb|CBL23539.1| MiaB-like tRNA modifying enzyme [Ruminococcus obeum A2-162] Length = 438 Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 27/130 (20%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C +C +C + +G V S K D + + EV+ TG Sbjct: 145 RAYIKVQDGCNQFCTYCI----IPFARGRVRSRKIADVLREVETLAS-KGYKEVVLTGI- 198 Query: 154 PLILS----------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 LS + L +++ + + +Q +R S ++P+ I E ++ + Sbjct: 199 --HLSSYGVDFPKEERESLLSLIQAVSKVAGIQRIRLGS----LEPRIITEEFLEGIVAT 252 Query: 204 GKPVYIAIHA 213 GK + H Sbjct: 253 GK---VCPHF 259 >gi|288553123|ref|YP_003425058.1| molybdenum cofactor biosynthesis protein A [Bacillus pseudofirmus OF4] gi|288544283|gb|ADC48166.1| molybdenum cofactor biosynthesis protein A [Bacillus pseudofirmus OF4] Length = 307 Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 18/139 (12%) Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 K +LS ++ + S I ++ TGG+PL+ + +++ LR + + Sbjct: 15 KDELLSFEEITRLTTLFTKASSIEKLRITGGEPLMRKD--VDQLIDQLRRATKIDDIAMT 72 Query: 182 SRVPIVDPQRINPELIQCLKEAG-KPVYIAI-HANHPY--EFSE------EAIAAISRLA 231 + + P++ LKEAG K V +++ N E + + + + A Sbjct: 73 TNGV------MLPKMASRLKEAGLKRVTVSLDSLNDKRFGEINGRGIGVDQVLKGMDAAA 126 Query: 232 NAGIILLSQSVLLKGINDD 250 AG+ + V+ KG+ND Sbjct: 127 EAGLGVKVNMVVQKGVNDH 145 >gi|187779327|ref|ZP_02995800.1| hypothetical protein CLOSPO_02923 [Clostridium sporogenes ATCC 15579] gi|187772952|gb|EDU36754.1| hypothetical protein CLOSPO_02923 [Clostridium sporogenes ATCC 15579] Length = 740 Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 34/90 (37%), Gaps = 20/90 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-----FTGGD 153 + C + C++C++ G + ++K + YI + +I+ F GG+ Sbjct: 44 FIVTEGCNLRCKYCYQVHKNGENRMDFATAK---KIVDYILDNREIFSAPGVVWDFIGGE 100 Query: 154 PLILSHKRLQKVLKTLRYIKHVQI-LRFHS 182 PL+ + + + +R + Sbjct: 101 PLL-----------EIELMDQITDYIRLQT 119 >gi|189424840|ref|YP_001952017.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Geobacter lovleyi SZ] gi|189421099|gb|ACD95497.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Geobacter lovleyi SZ] Length = 193 Score = 39.3 bits (91), Expect = 0.79, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 53/113 (46%), Gaps = 17/113 (15%) Query: 93 YPDRILLKLL-HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 YP ++ + CP C +C + ++ + + ++ + + +++++ + + V+F+ Sbjct: 15 YPGKLAAVVFCQGCPWRCSYCHNQHLLDAGQSGTVT---WQEIIRFLEQRRSLLDAVVFS 71 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIVDPQRINPELIQCLKE 202 GG+P + + + L+ I+ + L H+ P PQR L CL + Sbjct: 72 GGEPTMQPT-----LPEALQAIRRMGFLTGLHTGGP--YPQR----LAACLSQ 113 >gi|317008935|gb|ADU79515.1| putative MiaB-like tRNA modifying enzyme [Helicobacter pylori India7] Length = 418 Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 35/96 (36%), Gaps = 14/96 (14%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R +K+ C C +C R ++ +L D + + EV+ Sbjct: 133 KTRAFIKIQEGCDFDCNYCIIPSVRGRARSFEERKILEQVD-------LLCSKGVQEVVL 185 Query: 150 TGGDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 TG + R + +++K L I ++ +R S Sbjct: 186 TGTNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|313892993|ref|ZP_07826570.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella sp. oral taxon 158 str. F0412] gi|313442346|gb|EFR60761.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella sp. oral taxon 158 str. F0412] Length = 482 Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 37/88 (42%), Gaps = 7/88 (7%) Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y DRI+L + C C +C K L+ + + + ++ VI Sbjct: 90 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQEQIKEEVIALEAMGHKRIVI 149 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 +G DPL L+ +L++++ I ++ Sbjct: 150 ESGEDPLNNP---LEYILESIKTIYSIK 174 >gi|294778166|ref|ZP_06743597.1| radical SAM domain protein [Bacteroides vulgatus PC510] gi|294448025|gb|EFG16594.1| radical SAM domain protein [Bacteroides vulgatus PC510] Length = 503 Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 39/192 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156 L + C +C++C + S T+ + I+E Q+ +V GG+ + Sbjct: 151 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 205 Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212 ++ +LK L R I +++P+ +L+Q ++E G V I++ Sbjct: 206 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 254 Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261 A H + E + + L ++G+ SVL N +LA L+ Sbjct: 255 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQVNVLAELLHELS 313 Query: 262 -----VELRIKP 268 + RI P Sbjct: 314 HLKHIRDWRIIP 325 >gi|282877988|ref|ZP_06286797.1| MiaB-like protein [Prevotella buccalis ATCC 35310] gi|281299989|gb|EFA92349.1| MiaB-like protein [Prevotella buccalis ATCC 35310] Length = 453 Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 41/123 (33%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C + + A + E++ TG + Sbjct: 161 RTRYFLKVQDGCNYFCTYCTI-PFARGFSRNPSIASLVQQAEQ--AAEEGGKEIVLTGVN 217 Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + + ++K L ++ ++ R S ++P + ELI ++ Sbjct: 218 IGEFGERTDETFLDLVKALDQVEGIRRFRISS----LEPDLMADELIDYCAQSR---AFM 270 Query: 211 IHA 213 H Sbjct: 271 PHF 273 >gi|253997231|ref|YP_003049295.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylotenera mobilis JLW8] gi|253983910|gb|ACT48768.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylotenera mobilis JLW8] Length = 442 Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 22/113 (19%), Positives = 42/113 (37%), Gaps = 14/113 (12%) Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 H P R+ L ++ C YC FC G + + TEA + + Sbjct: 140 HLPPPRVEGVSAFLSIMEGCSKYCSFCVVPYTRGEEVSRPFADILTEAVQ---LAEQGVK 196 Query: 146 EVIFTGGDPLILSHKR------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 E+ G + + L +++T+ I ++ +RF + P +R+ Sbjct: 197 EITLLGQNVNAYRTEYDGVESDLAMLIETIAEIPQIERIRFTTSHPNEMNERL 249 >gi|302874950|ref|YP_003843583.1| Radical SAM domain-containing protein [Clostridium cellulovorans 743B] gi|307690432|ref|ZP_07632878.1| Radical SAM domain-containing protein [Clostridium cellulovorans 743B] gi|302577807|gb|ADL51819.1| Radical SAM domain protein [Clostridium cellulovorans 743B] Length = 454 Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 9/124 (7%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIF 149 Y + L ++H C + C++CF E +S + AL Y+ ++S EV Sbjct: 93 YVKALCLNIIHDCNLRCKYCFADEGEYHGHKGKMSIDTAKKALEYVIKRSGPRKNIEVDL 152 Query: 150 TGGDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 GG+PL+ K + + K L H + +RF + + PE++ L + + Sbjct: 153 FGGEPLMAMDVIKEVVQYGKELGE-NHKKNIRF---TMTTNSTLLTPEVVDFLDKEMGNI 208 Query: 208 YIAI 211 ++I Sbjct: 209 ILSI 212 >gi|257062911|ref|YP_003142583.1| GTP cyclohydrolase subunit MoaA [Slackia heliotrinireducens DSM 20476] gi|256790564|gb|ACV21234.1| GTP cyclohydrolase subunit MoaA [Slackia heliotrinireducens DSM 20476] Length = 333 Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 69/180 (38%), Gaps = 24/180 (13%) Query: 94 PDRIL----LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVI 148 R++ + L C + CR+C E V + +LS ++ E + + I + Sbjct: 5 HGRVIDYLRISLTDRCNLRCRYCMPEEGVSALSHEDILSLEEIERIIR-VAAGMGISRLR 63 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--- 205 TGG+PL+ K + ++K ++ + + + P++ LKEAG Sbjct: 64 LTGGEPLV--RKGIAGLIKEAMRTPGIESVALTTNGI------LLPKMAAELKEAGLSRV 115 Query: 206 PVYIAI------HANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLM 258 + + H + +A I AG + +V+++ +N D A + Sbjct: 116 NISLDTLDEEQFHYITRRGHVADVMAGIDAALEAGFNPVKINAVVVRSLNQDLYEFARMS 175 >gi|167757698|ref|ZP_02429825.1| hypothetical protein CLOSCI_00028 [Clostridium scindens ATCC 35704] gi|167664580|gb|EDS08710.1| hypothetical protein CLOSCI_00028 [Clostridium scindens ATCC 35704] Length = 427 Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 29/131 (22%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R +K+ C +C +C R + +V+ ++ E ++ EV+ Sbjct: 141 HTRAYIKVQDGCNQFCSYCIIPYARGRVRSRSHDSVI--REVEEL-----ARNGYKEVVL 193 Query: 150 TGGDPLILS-------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 TG LS L +L + I+ ++ +R S ++P+ I E + + Sbjct: 194 TGI---HLSSYGVDTGDDLLSLILS-IHEIEGIRRIRLGS----LEPRIITEEFAKTIAG 245 Query: 203 AGKPVYIAIHA 213 K + H Sbjct: 246 LPK---MCPHF 253 >gi|114617065|ref|XP_001150394.1| PREDICTED: leucine zipper protein 5 isoform 8 [Pan troglodytes] Length = 1096 Score = 39.3 bits (91), Expect = 0.80, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%) Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173 + V + + + Y+ + E + + K+L +LK L Sbjct: 744 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 797 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 ++ L + P P+ + L+ G ++IH H F E +S L + Sbjct: 798 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSMLEDT 850 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288 G L S+ +L I D E L R + +I YL G F++ ++ Sbjct: 851 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 907 Query: 289 EGQKIVASLKE 299 I+ ++K Sbjct: 908 RSLGIMQTVKG 918 >gi|330836389|ref|YP_004411030.1| Radical SAM domain-containing protein [Spirochaeta coccoides DSM 17374] gi|329748292|gb|AEC01648.1| Radical SAM domain protein [Spirochaeta coccoides DSM 17374] Length = 310 Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 6/63 (9%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 YP + + + C + C+ C + T LS KD + + Y+++ +I E+ GG Sbjct: 8 YPQKFNVLITSKCNLRCKHC-----YLDPRQTELSVKDFSSIIDYLKK-IKIKELCIEGG 61 Query: 153 DPL 155 +PL Sbjct: 62 EPL 64 >gi|317054889|ref|YP_004103356.1| Radical SAM domain-containing protein [Ruminococcus albus 7] gi|315447158|gb|ADU20722.1| Radical SAM domain protein [Ruminococcus albus 7] Length = 334 Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 37/81 (45%), Gaps = 7/81 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKSQIWEVIFTG 151 ++ + C + C +C+ M + K ++ + +AA+ + + + V F G Sbjct: 3 VVFWTTNDCNLNCSYCY-NRMSNNIKKEYMTREVADAAIDMLTKLDCWKTADEIAVQFHG 61 Query: 152 GDPLILSHKRLQKVLKTLRYI 172 G+PL ++ ++ +++ + Sbjct: 62 GEPL-MNCDIIEYIMERFEAL 81 >gi|152985383|ref|YP_001347577.1| hypothetical protein PSPA7_2205 [Pseudomonas aeruginosa PA7] gi|150960541|gb|ABR82566.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7] Length = 298 Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152 ++L + + C C FC EM + + + E L I+ + + V G Sbjct: 24 LILPVTNGCSWNRCGFC---EMYTQPQKKFRARDEAE-VLEEIRRCGERLIVKRVFLADG 79 Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178 D L+L +RL VL+ +R + V+ + Sbjct: 80 DALVLPTRRLLVVLEAIRRHLPEVERV 106 >gi|312135098|ref|YP_004002436.1| RNA modification enzyme, miab family [Caldicellulosiruptor owensensis OL] gi|311775149|gb|ADQ04636.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor owensensis OL] Length = 434 Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 47/124 (37%), Gaps = 9/124 (7%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C +C +C G+ + L + E + + E + TG + Sbjct: 141 RSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSL--ESIEEEVRRLVSN-GYKEFVITGIN 197 Query: 154 -PLILSHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 L V++ + I+ V+ +R S P++ ++ L+ + ++ Sbjct: 198 ISAYGKDLDGKITLIDVIERINEIEGVKRIRLSSLEPLIMSEQFISRLLS-FDKLCHHLH 256 Query: 209 IAIH 212 +++ Sbjct: 257 LSLQ 260 >gi|302871917|ref|YP_003840553.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor obsidiansis OB47] gi|302574776|gb|ADL42567.1| RNA modification enzyme, MiaB family [Caldicellulosiruptor obsidiansis OB47] Length = 433 Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 47/124 (37%), Gaps = 9/124 (7%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C +C +C G+ + L + E + + E + TG + Sbjct: 141 RSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSL--ESIEEEVRRLVSN-GYKEFVITGIN 197 Query: 154 -PLILSHK----RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 L V++ + I+ V+ +R S P++ ++ L+ + ++ Sbjct: 198 ISAYGKDLDGKITLIDVIERINEIEGVKRIRLSSLEPLIMSEQFISRLLS-FDKLCHHLH 256 Query: 209 IAIH 212 +++ Sbjct: 257 LSLQ 260 >gi|303229415|ref|ZP_07316205.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella atypica ACS-134-V-Col7a] gi|302515951|gb|EFL57903.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella atypica ACS-134-V-Col7a] Length = 472 Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 7/88 (7%) Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y DRI+L + C C +C K L+ + + + ++ VI Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQEQIKEEVIALEAMGHKRIVI 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 +G DPL L +L++++ I ++ Sbjct: 140 ESGEDPLNNP---LDYILESIKTIYSIK 164 >gi|206602846|gb|EDZ39327.1| Putative oxygen-independent coproporphyrinogen III oxidase [Leptospirillum sp. Group II '5-way CG'] Length = 389 Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 30/123 (24%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-------------KS 142 R L + CP C +C ++ S TE A AY++ S Sbjct: 12 RTLYVQVPFCPERCHYC-----------SLPVSLQTERAPAYLRALFREKKRLMEREDLS 60 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + + GG P +L LQ++L+ L+ + + + SR P + PE++ L+ Sbjct: 61 GLETLYVGGGTPTVLPLPHLQELLEELQKGLPPLAEITVESR-----PDTVTPEILHRLR 115 Query: 202 EAG 204 +G Sbjct: 116 SSG 118 >gi|159044234|ref|YP_001533028.1| hypothetical protein Dshi_1685 [Dinoroseobacter shibae DFL 12] gi|157911994|gb|ABV93427.1| hypothetical protein Dshi_1685 [Dinoroseobacter shibae DFL 12] Length = 314 Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 25/158 (15%), Positives = 61/158 (38%), Gaps = 20/158 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGG 152 P + +C + C C+ + + +++ + L +++++ + E+ FTGG Sbjct: 31 PQTLWFNTGTLCNIECANCYIESSPTNDRLVYITAAEVTDYLDQLEDRNWGVREIAFTGG 90 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVYI 209 +P ++ + ++ L V IL + P + L++ G + + Sbjct: 91 EPF-MNPEMIEMTEAALARGYEVLIL-----TNAMLPMMRKTMREGLLRLHAAYGDKLTL 144 Query: 210 AIHANHPYE-FSEE---------AIAAISRLANAGIIL 237 I +H E +E + ++ L + GI + Sbjct: 145 RISVDHWSEKLHDEERGKGSFAKTLQGMAWLRDNGIRM 182 >gi|107102506|ref|ZP_01366424.1| hypothetical protein PaerPA_01003569 [Pseudomonas aeruginosa PACS2] Length = 298 Score = 39.3 bits (91), Expect = 0.81, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152 ++L + + C C FC + +Q ++D L I+ + + V G Sbjct: 24 LILPVTNGCSWNKCGFC----EMYTQPQKKFRARDENEVLEEIRRCGERLIVKRVFLADG 79 Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178 D L+L +RL VL+ +R + V+ + Sbjct: 80 DALVLPTRRLLAVLQAIRQHLPEVERV 106 >gi|296185249|ref|ZP_06853659.1| radical SAM domain protein [Clostridium carboxidivorans P7] gi|296050083|gb|EFG89507.1| radical SAM domain protein [Clostridium carboxidivorans P7] Length = 328 Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C +YC C+R G + L+++ + + I + + +IF+GG+PL+ Sbjct: 4 VSWNTTNKCNMYCSHCYRD--SGKKYKEELTTEQGKKLIDEIAK-AGFKMMIFSGGEPLM 60 Query: 157 LSH-KRLQKVLKTLRYIK 173 L + L I Sbjct: 61 RKDIFELIQYASDLGVIP 78 >gi|288925693|ref|ZP_06419625.1| translation initiation factor IF-1 [Prevotella buccae D17] gi|294674749|ref|YP_003575365.1| translation initiation factor IF-1 [Prevotella ruminicola 23] gi|315606482|ref|ZP_07881497.1| translation initiation factor IF-1 [Prevotella buccae ATCC 33574] gi|317503958|ref|ZP_07961966.1| translation initiation factor IF-1 [Prevotella salivae DSM 15606] gi|288337631|gb|EFC75985.1| translation initiation factor IF-1 [Prevotella buccae D17] gi|294473082|gb|ADE82471.1| translation initiation factor IF-1 [Prevotella ruminicola 23] gi|315251888|gb|EFU31862.1| translation initiation factor IF-1 [Prevotella buccae ATCC 33574] gi|315664984|gb|EFV04643.1| translation initiation factor IF-1 [Prevotella salivae DSM 15606] Length = 72 Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ +E G +I+ ISG + YI LPG KV++ +++ K G Sbjct: 22 FRVELENGVQII----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70 >gi|257452357|ref|ZP_05617656.1| radical SAM domain-containing protein [Fusobacterium sp. 3_1_5R] gi|257465851|ref|ZP_05630162.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans ATCC 25563] gi|315917008|ref|ZP_07913248.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans ATCC 25563] gi|317058900|ref|ZP_07923385.1| radical SAM domain-containing protein [Fusobacterium sp. 3_1_5R] gi|313684576|gb|EFS21411.1| radical SAM domain-containing protein [Fusobacterium sp. 3_1_5R] gi|313690883|gb|EFS27718.1| radical SAM domain-containing protein [Fusobacterium gonidiaformans ATCC 25563] Length = 222 Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L C + C +C + + K + + E L+ + ++ +I + TGG+PL+ Sbjct: 24 ALFIRFQYCNLNCSYCDTKW--ANSKNSPFTWMSLEEILS-LAKEKRIKNITLTGGEPLL 80 Query: 157 LSHKRLQKVLKTLRY 171 + ++ +L+ Sbjct: 81 QTD--IRSLLEAFSK 93 >gi|255524292|ref|ZP_05391250.1| Radical SAM domain protein [Clostridium carboxidivorans P7] gi|255511975|gb|EET88257.1| Radical SAM domain protein [Clostridium carboxidivorans P7] Length = 328 Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 4/78 (5%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C +YC C+R G + L+++ + + I + + +IF+GG+PL+ Sbjct: 4 VSWNTTNKCNMYCSHCYRD--SGKKYKEELTTEQGKKLIDEIAK-AGFKMMIFSGGEPLM 60 Query: 157 LSH-KRLQKVLKTLRYIK 173 L + L I Sbjct: 61 RKDIFELIQYASDLGVIP 78 >gi|257791825|ref|YP_003182431.1| Radical SAM domain-containing protein [Eggerthella lenta DSM 2243] gi|257475722|gb|ACV56042.1| Radical SAM domain protein [Eggerthella lenta DSM 2243] Length = 333 Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 39/213 (18%), Positives = 75/213 (35%), Gaps = 43/213 (20%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C + C C++ LS+ + + + I + +IF+GG+PL+ Sbjct: 3 VSWMTTNKCNLKCVHCYQDAE--EATDRELSTDEGKKMIDEIAR-AGFKVMIFSGGEPLM 59 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKPVYIAIHAN 214 + +++ R R P+ I PE+ LKEAG + I + Sbjct: 60 RPD--IYELVAHAA--------RAGLR-PVFGSNGTLITPEVALRLKEAG-ACAMGISVD 107 Query: 215 ------HPY----EFSEEAIAA-ISRLANAGIILLSQSVLLKGIND-DPEILANLMRTFV 262 H E + + A I AG+ Q L + D + + + + V Sbjct: 108 SLDAAKHDRFRGLERAYDLTMAGIEACKQAGLPF--Q--LHTTVVDWNRDEVCAITDFAV 163 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 E+ +Y+ F + + G+ I Sbjct: 164 EIGAMAHYVF----------FLIPVGRGKFIQE 186 >gi|269798345|ref|YP_003312245.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula DSM 2008] gi|269094974|gb|ACZ24965.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula DSM 2008] Length = 321 Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L L C C +C E+ + +LS + L + V TGG+PL+ Sbjct: 12 VRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMKILGAF-HHIGVKAVRLTGGEPLL 70 Query: 157 LSHKRLQKVLKTLRY 171 ++++L ++ Sbjct: 71 YP--HIEELLSRIKE 83 >gi|160903203|ref|YP_001568784.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95] gi|160360847|gb|ABX32461.1| Radical SAM domain protein [Petrotoga mobilis SJ95] Length = 448 Score = 39.3 bits (91), Expect = 0.82, Method: Composition-based stats. Identities = 29/159 (18%), Positives = 65/159 (40%), Gaps = 28/159 (17%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA---LAY-IQEKSQIWEVI 148 Y ++L CP +C +C + K + + + Y ++++ + +++ Sbjct: 208 YLTYVVLVSSVGCPFHCTYC------VTPKMWKFQYRSIDKIINNIEYVLKKRPYVKDIV 261 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPV 207 F D +L K ++++LK L +R+H +P R++ E+ LK+A Sbjct: 262 FF-DDAFLLR-KDIKELLKYLSKFD----VRYH--LPNGIHARRVDDEIALLLKKANFKT 313 Query: 208 Y--------IAIHANHPYEFS-EEAIAAISRLANAGIIL 237 I ++ + + + A++ L NAG + Sbjct: 314 IKLGYESYDFNIQKGTGFKVTNNDLVKAVTCLKNAGFDM 352 >gi|325958472|ref|YP_004289938.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21] gi|325329904|gb|ADZ08966.1| Radical SAM domain protein [Methanobacterium sp. AL-21] Length = 515 Score = 39.3 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 21/135 (15%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 LL++ C CRFC + ++ L K+ +K+ + +V G + Sbjct: 209 LLEVSRGCTRGCRFCMAGCIFRPRREMPL--KELLKIAEEGCQKTGLKKVALIGA--AVS 264 Query: 158 SHKRLQKVLKTLRYIK-HVQI--LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 + +++++ L + V LR S I L++ LK +G Sbjct: 265 DYSKIEELCAGLHEMGLQVTTPSLRIES---------ITENLLEILKASGLKTITI---- 311 Query: 215 HPYEFSEEAIAAISR 229 E + E A ++ Sbjct: 312 -APESTWEVRKAANK 325 >gi|160880587|ref|YP_001559555.1| MiaB-like tRNA modifying enzyme YliG [Clostridium phytofermentans ISDg] gi|238065326|sp|A9KLS2|RIMO_CLOPH RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|160429253|gb|ABX42816.1| MiaB-like tRNA modifying enzyme YliG [Clostridium phytofermentans ISDg] Length = 440 Score = 39.3 bits (91), Expect = 0.83, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 22/114 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA----------LAYIQEKSQIWEVI 148 LK+ C +C +C ++ G + +V + E A L I +++ ++ V Sbjct: 148 LKIAEGCDKHCTYCIIPKIRGDYR-SVPMERLVEEAKFLSEGGVKELILIAQETTVYGVD 206 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 G K L ++L+ L I ++ +R P+ IN ELI LK Sbjct: 207 LYGK-------KMLPELLRKLCAIDGIEWIRIQ----YCYPEEINDELIDVLKS 249 >gi|325478525|gb|EGC81637.1| tRNA methylthiotransferase YqeV [Anaerococcus prevotii ACS-065-V-Col13] Length = 431 Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 18/119 (15%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT---- 150 R +K+ C +YC +C G+ + + + + E E++ T Sbjct: 142 TRAYMKIQDGCNMYCSYCLIPYARGNI--SSRDMESIKNEAKRLAEN-GYKEIVLTGIHV 198 Query: 151 ---GGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L + L V++ + ++ +R S ++P+ I E ++ +K K Sbjct: 199 SSYGKD---LKNGTSLIDVIEEVANTDGIERIRLSS----MEPRHITREFLERMKATKK 250 >gi|261414864|ref|YP_003248547.1| RNA modification enzyme, MiaB family [Fibrobacter succinogenes subsp. succinogenes S85] gi|261371320|gb|ACX74065.1| RNA modification enzyme, MiaB family [Fibrobacter succinogenes subsp. succinogenes S85] gi|302326764|gb|ADL25965.1| tRNA-i(6)A37 modification enzyme MiaB [Fibrobacter succinogenes subsp. succinogenes S85] Length = 440 Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 17/123 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIWEVIFTGG-- 152 + + C C +C + G +K +D + L + I EV+ G Sbjct: 151 AFVAIQRGCNKRCSYCIVPYLRGPEKY-----RDMDDVLTEVKRAADKGITEVMLLGQTV 205 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 + + +L + I ++ +RF S P P+ ELI L K H Sbjct: 206 NAYKTPNADFTTLLTKVSEIGGIKRIRFTS--P--HPRHYTNELIDVLLNNPK----VCH 257 Query: 213 ANH 215 H Sbjct: 258 YAH 260 >gi|148548997|ref|YP_001269099.1| molybdenum cofactor synthesis domain-containing protein [Pseudomonas putida F1] gi|148513055|gb|ABQ79915.1| molybdenum cofactor synthesis domain protein [Pseudomonas putida F1] Length = 322 Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C +C + +V +Q LS+ +AY+ E + I + TGG+PL+ Sbjct: 15 VSLTAACNYACTYCVPDGKRLVAAQDE--LSADALARGVAYLIEAAGIERLRITGGEPLV 72 Query: 157 LSHKRLQKVLKTLRYIK 173 RL L + + Sbjct: 73 SP--RLDAFLAAVAKLD 87 >gi|290960712|ref|YP_003491894.1| hypothetical protein SCAB_63441 [Streptomyces scabiei 87.22] gi|260650238|emb|CBG73354.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 736 Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 18/127 (14%) Query: 97 ILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDT----EAALAYI--QEKSQIWEV 147 ++LK+ C + C C+ + + TV++ + Y+ + + V Sbjct: 27 LVLKIHSRCDLACDHCYVYEASDQSWRTRPTVIAEETLVQVARRLTEYVCARNLPSVT-V 85 Query: 148 IFTGGDPLILSHKRLQKVLKTL-RYIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAG 204 I GG+PL+ RL+++ L R + V LR H+ R+N ++ E Sbjct: 86 ILHGGEPLLAGPARLERICAELTRALTPVTALDLRIHTNAV-----RLNENHLRIFDEFR 140 Query: 205 KPVYIAI 211 + I++ Sbjct: 141 VKIGISL 147 >gi|222444854|ref|ZP_03607369.1| hypothetical protein METSMIALI_00467 [Methanobrevibacter smithii DSM 2375] gi|222434419|gb|EEE41584.1| hypothetical protein METSMIALI_00467 [Methanobrevibacter smithii DSM 2375] Length = 376 Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 12/125 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPL 155 +++ C C++C+ E + + + ++++ + F GG+PL Sbjct: 5 VMIIPTLGCQCNCKYCWGSESTKEMMDISV----IDDIITWLKDFRDDKVHFTFHGGEPL 60 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 + + + L+ L I +++ S + ++ ELI + V ++ + Sbjct: 61 LAGYDFYAEALEKLSKIDNLEGFSLQS---NIW--LLSDELIDLFLKY--NVAVSTSIDG 113 Query: 216 PYEFS 220 P E + Sbjct: 114 PEEIN 118 >gi|241662581|ref|YP_002980941.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii 12D] gi|240864608|gb|ACS62269.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii 12D] Length = 373 Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 7/77 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +++ +LS ++ E E + ++ TGG+ Sbjct: 48 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMARLFIEH-GVEKIRLTGGE 106 Query: 154 PLILSH-KRLQKVLKTL 169 PL+ +RL ++L L Sbjct: 107 PLLRKDIERLVEMLARL 123 >gi|148643666|ref|YP_001274179.1| arylsulfatase regulator, AslB [Methanobrevibacter smithii ATCC 35061] gi|148552683|gb|ABQ87811.1| arylsulfatase regulator, AslB [Methanobrevibacter smithii ATCC 35061] Length = 376 Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 12/125 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPL 155 +++ C C++C+ E + + + ++++ + F GG+PL Sbjct: 5 VMIIPTLGCQCNCKYCWGSESTKEMMDISV----IDDIITWLKDFRDDKVHFTFHGGEPL 60 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 + + + L+ L I +++ S + ++ ELI + V ++ + Sbjct: 61 LAGYDFYAEALEKLSKIDNLEGFSLQS---NIW--LLSDELIDLFLKY--NVAVSTSIDG 113 Query: 216 PYEFS 220 P E + Sbjct: 114 PEEIN 118 >gi|62286584|sp|Q9X758|ANSME_KLEPN RecName: Full=Anaerobic sulfatase-maturating enzyme; Short=AnSME; AltName: Full=Arylsulfatase-activating protein; AltName: Full=Ser-type sulfatase-activating enzyme gi|4586202|emb|CAB40960.1| arylsulfatase activating protein [Klebsiella pneumoniae] Length = 395 Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 45/232 (19%), Positives = 82/232 (35%), Gaps = 34/232 (14%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG-TVLSSKDTEAAL 135 P+ SP+ + P + C + CR+C+ + + E + Sbjct: 13 PLAAEPRSPVPFHILMKP------IGPACNLACRYCY---YPQDETPVNKMDDARLEQFI 63 Query: 136 -AYIQEKS----QIWEVIFTGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDP 189 YI + +I ++ GG+PL+ +K L RY + S + Sbjct: 64 RRYIAAQPAGAREIN-FVWQGGEPLLAGLSFYKKALALQARYAPDGVTI---SNSLQTNG 119 Query: 190 QRINPELIQCLKEAGKPVYIAIHANHPYE-FSEEAIAAISRLANA--GIILLSQS-V--- 242 IN + +E G + + + N + + S + A GI LL Q V Sbjct: 120 TLINDAWCRLFREHGFIIGLGLEGNEALQDYHRPDKRGRSTWSAALRGIDLLHQHQVDFN 179 Query: 243 LLKGI-NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 LL + N+ A + V L + Y P ++ G + + EG ++ Sbjct: 180 LLVVVHNEMAAHAAAIYVRLVSLGAR-YLQFQPLMSEGAA-----LREGYQL 225 >gi|23014017|ref|ZP_00053858.1| COG2896: Molybdenum cofactor biosynthesis enzyme [Magnetospirillum magnetotacticum MS-1] Length = 324 Score = 39.3 bits (91), Expect = 0.84, Method: Composition-based stats. Identities = 26/167 (15%), Positives = 60/167 (35%), Gaps = 27/167 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C +C ++ + +L+ ++ + ++ TGG+PL+ Sbjct: 14 LSVTDRCDLRCVYCMAEDVTFKPRAELLTLEELGRLCEAFVR-KGVRKIRLTGGEPLV-- 70 Query: 159 HKRLQKVLKTLRYI------KHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211 + + ++ L + V + +++ + L AG + + +++ Sbjct: 71 RRNIMSLIDRLGALVADGRLDEVTLTTNGTQL---------AKHADGLATAGVRRINVSL 121 Query: 212 HANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250 P F+ I AG+ + +V L GIND Sbjct: 122 DTLDPTRFTSLTRHGRLEQVMEGIFAAKAAGLAVRINTVTLPGINDH 168 >gi|298385677|ref|ZP_06995235.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14] gi|298261818|gb|EFI04684.1| 2-methylthioadenine synthetase [Bacteroides sp. 1_1_14] Length = 436 Score = 39.3 bits (91), Expect = 0.85, Method: Composition-based stats. Identities = 29/227 (12%), Positives = 71/227 (31%), Gaps = 71/227 (31%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKPMEEIVDEVRYLVSQGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G D + + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 + L+ I+D+ + LMR Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316 ++ E+ K++ ++++ G+ + ++ PG Sbjct: 268 --------------VSKEDTYKLIEQFRKEVPGIHLRTTLMVGHPGE 300 >gi|291459250|ref|ZP_06598640.1| radical SAM domain protein [Oribacterium sp. oral taxon 078 str. F0262] gi|291418504|gb|EFE92223.1| radical SAM domain protein [Oribacterium sp. oral taxon 078 str. F0262] Length = 461 Score = 39.3 bits (91), Expect = 0.85, Method: Composition-based stats. Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 9/118 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C +CF + K ++S + + AL ++ E S EV F GG+PL Sbjct: 101 LLVSHRCNLNCSYCFASQGSFCGKQGLMSFETGKRALDFLIENSGSRRNLEVDFFGGEPL 160 Query: 156 ILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + + + +K++ R I +H + RF + + E+I+ V +++ Sbjct: 161 V-NFEVCRKLVSYARSIEKEHGKNFRF---TLTTNGVSVTDEVIEWANRECYNVVLSL 214 >gi|182412684|ref|YP_001817750.1| radical SAM domain-containing protein [Opitutus terrae PB90-1] gi|177839898|gb|ACB74150.1| Radical SAM domain protein [Opitutus terrae PB90-1] Length = 231 Score = 39.3 bits (91), Expect = 0.85, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 33/89 (37%), Gaps = 6/89 (6%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + C + C +C + + E + +Q V+ TGG+P+I Sbjct: 22 VFVRTSGCNLRCNWC---DTPYASWNPEGKPWRIEQIVREVQSHPTARHVVLTGGEPMIA 78 Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHSRVP 185 K + ++ L+ + H+ I + P Sbjct: 79 --KEIAELAAQLKGLHYHITIETAATVAP 105 >gi|307243816|ref|ZP_07525947.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678] gi|306492819|gb|EFM64841.1| radical SAM domain protein [Peptostreptococcus stomatis DSM 17678] Length = 457 Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 9/118 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF ++ K ++ + + AL Y+ S E+ F GG+PL Sbjct: 98 LNVAHDCNLKCKYCFAKQGDFGGKAELMPLEVGKKALDYLIANSGNRRNLEIDFFGGEPL 157 Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + K L K + + + +RF + ++ E I + E V +++ Sbjct: 158 MNWPVVKELVKYGREVEK-PAGKNIRF---TITTNGVLLDDEKIDFINEHMHNVVLSL 211 >gi|116747616|ref|YP_844303.1| RNA modification protein [Syntrophobacter fumaroxidans MPOB] gi|116696680|gb|ABK15868.1| RNA modification enzyme, MiaB family [Syntrophobacter fumaroxidans MPOB] Length = 440 Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 24/149 (16%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVI 148 H R LK+ C YC +C V S + L+ ++ ++ EVI Sbjct: 142 HTGRTRAYLKVQDGCNAYCSYC-----VVPYTRGRSRSLPADEVLSRLRRFVEVGYREVI 196 Query: 149 FT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 T G D + + L +L + +R S P+ L+ Sbjct: 197 LTGIHLGQWGKD--LTPTRDLAGLLDRIGDSDSPPRVRLSSLEPLEWSA-------GLLR 247 Query: 202 EAGKPVYIAIHANHP-YEFSEEAIAAISR 229 +I H + P ++ +AA+ R Sbjct: 248 RISTVPWICPHFHIPLQSGDDDVLAAMHR 276 >gi|326392152|ref|ZP_08213626.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200] gi|325991807|gb|EGD50325.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus JW 200] Length = 460 Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLI 156 + + C + C++C+ +Q+ +++ + E +I+ ++ ++F GG+PL+ Sbjct: 86 IHTSNECNLKCKYCYANHGDYNQEEAIVTEEIAEKVADFIKLNFPKVKVIVFFGGEPLL 144 >gi|325968873|ref|YP_004245065.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28] gi|323708076|gb|ADY01563.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28] Length = 362 Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 10/103 (9%) Query: 84 SPLKGIVHRYPDRI-------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 S + + +Y + +L +VC + CRFC + G + LS+++ + Sbjct: 36 SAAEYLTRKYFGNVVTFIPNMILNYTNVCVIACRFCAFYRLPGHPEAYTLSAEEALRRVM 95 Query: 137 YIQEKSQIWEVIFTGG-DPLILSHKRLQKVLKTL-RYIKHVQI 177 I + I +V+ GG +P L + +++ K L + HV I Sbjct: 96 AIDREFGIRQVLIQGGINP-ELDIEYYERLFKALKAKLPHVAI 137 >gi|294794006|ref|ZP_06759143.1| putative ThiH protein [Veillonella sp. 3_1_44] gi|294455576|gb|EFG23948.1| putative ThiH protein [Veillonella sp. 3_1_44] Length = 482 Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 7/88 (7%) Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y DRI+L + C C +C K L+ + ++ VI Sbjct: 90 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 149 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 +G DPL L+ +L++++ I ++ Sbjct: 150 ESGEDPLNNP---LEYILESIKTIYSIK 174 >gi|302873839|ref|YP_003842472.1| Radical SAM domain-containing protein [Clostridium cellulovorans 743B] gi|307689916|ref|ZP_07632362.1| Radical SAM domain-containing protein [Clostridium cellulovorans 743B] gi|302576696|gb|ADL50708.1| Radical SAM domain protein [Clostridium cellulovorans 743B] Length = 460 Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 43/186 (23%), Positives = 70/186 (37%), Gaps = 38/186 (20%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 P + + L H C C +CF G K L++ + L I++ + I + +G Sbjct: 118 PGEMTIILTHNCNFRCIYCF--NNSGEAKTVQLNTNEW---LEVIKQARELGIVKCTVSG 172 Query: 152 GDPLILSHKRLQKVLKTLRYIK----HVQILRFHSRVPIVDPQRINPELIQCLKEAGKP- 206 G+P++ LR I V I S ++ +++ KE G P Sbjct: 173 GEPMLHP-----GFFDILRAITDSGMSVYICTNGS--------LVDENVVKQFKEIGLPC 219 Query: 207 VYIAIHANHPYEFS----------EEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILA 255 V ++ A P E + I AI L AGI + +SV+ +N D L Sbjct: 220 VQFSLDAGTP-EIHDKMATVKGTYPKVINAIKLLVGAGIDVYIKSVITP-VNYSDISNLI 277 Query: 256 NLMRTF 261 +L Sbjct: 278 DLCSEL 283 >gi|213513990|ref|NP_001133850.1| Farnesyl pyrophosphate synthetase [Salmo salar] gi|209155566|gb|ACI34015.1| Farnesyl pyrophosphate synthetase [Salmo salar] Length = 359 Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 53/155 (34%), Gaps = 28/155 (18%) Query: 157 LSHKRLQKVLKTLRYIKHV-----QILR----FHSRVPIVDPQRINPELIQCLKEAGKPV 207 L+ L L LR + H + R S +V P + + ++ G + Sbjct: 39 LTDSVLTDALNRLREVLHYNTPGGKRNRGLSVIGSLRELVPPTELTQDAVRRALLVGWCI 98 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQS-------VLLKGINDDPEILANLMRT 260 E + + +A + Q V L IND + ++ R Sbjct: 99 ----------ELLQAFFLVADDIMDASVTRRGQPCWYKRERVGLDAINDSFLLEGSIYRL 148 Query: 261 FVE-LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 R +PYY+H +L TS F+ + + ++ Sbjct: 149 LRRHCRAQPYYVHLLELFTETS-FQTELGQALDLM 182 >gi|154150498|ref|YP_001404116.1| radical SAM domain-containing protein [Candidatus Methanoregula boonei 6A8] gi|153999050|gb|ABS55473.1| Radical SAM domain protein [Methanoregula boonei 6A8] Length = 391 Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 41/108 (37%), Gaps = 10/108 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C + C C+ R S LS+ + A + + + I VIFTGG+PL+ Sbjct: 40 VFWNLTDRCNLSCTHCYSRSAPDSPTQGELSTNEALAFIDDLAA-AGIPLVIFTGGEPLV 98 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 + L H + + + I E+ +K +G Sbjct: 99 RPD------IWQLAG--HCRDKGIKT-ALSTNGTLITDEVAAKIKASG 137 >gi|119357341|ref|YP_911985.1| radical SAM protein [Chlorobium phaeobacteroides DSM 266] gi|205829698|sp|A1BGN4|RLMN_CHLPD RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|119354690|gb|ABL65561.1| 23S rRNA m(2)A-2503 methyltransferase [Chlorobium phaeobacteroides DSM 266] Length = 363 Score = 39.3 bits (91), Expect = 0.86, Method: Composition-based stats. Identities = 39/184 (21%), Positives = 76/184 (41%), Gaps = 41/184 (22%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL---AYIQ---EKSQIWEVIFTG-GDPLI 156 CP+ CRFC + K + + + + +I+ E ++I ++F G G+PL Sbjct: 118 GCPLQCRFCASGQ--TGFKRNLSADEIIDQVFSLNDFIRTKHESNEITNIVFMGMGEPL- 174 Query: 157 LSHKRLQKVLKTLRY------IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VY 208 L+ + L++ ++ L + + + + + P I L ++G + Sbjct: 175 LNFENLKESIEVLSDQSYKFNLPQ-RKITIST--VGIIPG------INELGKSGLKTKLA 225 Query: 209 IAIHANHPYE----FSEEAIA-AISRLANAGIILLSQS------V--LLKGINDDPEILA 255 I++H + E A ++++L SQ+ V LLKGIND E Sbjct: 226 ISLH-SASQETRESLIPVASEFSLTQLRKTLSEYTSQTGEPVTLVYMLLKGINDSVEDAR 284 Query: 256 NLMR 259 L++ Sbjct: 285 LLVK 288 >gi|282163554|ref|YP_003355939.1| hypothetical protein MCP_0884 [Methanocella paludicola SANAE] gi|282155868|dbj|BAI60956.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 366 Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 3/83 (3%) Query: 89 IVHRYP-DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS-SKDTEAALAYIQEKSQIWE 146 +V +YP ++I L C ++CR C+ K T S + ++ + Sbjct: 5 VVEKYPLNQIYFYLTEGCNLHCRHCWIAPKYQDSKHTYPSLPFNLFQSIIKQARPLGLAA 64 Query: 147 VIFTGGDPLILSH-KRLQKVLKT 168 V TGG+PL+ + +++K Sbjct: 65 VKLTGGEPLMHPDINNILELIKQ 87 >gi|257453136|ref|ZP_05618435.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_5R] gi|317059671|ref|ZP_07924156.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_5R] gi|313685347|gb|EFS22182.1| Fe-S oxidoreductase [Fusobacterium sp. 3_1_5R] Length = 436 Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 47/139 (33%), Gaps = 13/139 (9%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGG 152 R +K+ C +C +C G + ++ + L ++ +I + G Sbjct: 145 TRAYVKIQDGCNEFCSYCKIPFARGKSRSRKQEKVLEEIDKLL--MEGFQEIILIGINLG 202 Query: 153 DPL--ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 D + + +++ + ++ +R S V P RI I + + Sbjct: 203 DYGKDLEGDISFETLVQEILKRDLLKRVRIGS----VYPDRITNSFISLFENP--KMMPH 256 Query: 211 IHANHPYEFSEEAIAAISR 229 +H + + + + R Sbjct: 257 LHIS-LQSCDDTVLKNMKR 274 >gi|237736966|ref|ZP_04567447.1| radical SAM domain-containing protein [Fusobacterium mortiferum ATCC 9817] gi|229420828|gb|EEO35875.1| radical SAM domain-containing protein [Fusobacterium mortiferum ATCC 9817] Length = 296 Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 12/117 (10%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDP 154 ++L++ C C FC M +K + + + + + + + + + + GD Sbjct: 19 LILQITLGCSHNKCTFC---NMYKDKKFRIKTLDEIKEEIDFFRAQIKYVRRIFLADGDA 75 Query: 155 LILSHKRLQKVLKTL-RYIKHVQILRF--HSRVPIVDPQRINPELIQCLKEAGKPVY 208 LI+ L ++L L + + + ++ PE ++ LKE G + Sbjct: 76 LIIKTSTLLEILNYLNEKFPEKERVSIYASPKSLMLK----TPEELRTLKETGIELV 128 >gi|220907769|ref|YP_002483080.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC 7425] gi|219864380|gb|ACL44719.1| nitrogenase cofactor biosynthesis protein NifB [Cyanothece sp. PCC 7425] Length = 495 Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 47/194 (24%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQI 144 H Y R+ + + C + C +C R+ G + + L + Q+ Sbjct: 53 HHYA-RMHVAVAPACNIQCNYCNRKYDCANESRPGVVSELLTPEEAAHKVLVIAGKIPQM 111 Query: 145 WEVIFTG-GDPLILSHK------------------------RLQKVLKTLRY--IKHVQI 177 + G GDPL K L + + ++ + HV Sbjct: 112 TVLGIAGPGDPLANPDKTFRTFELIAEKAPDIKLCLSTNGLMLPEYIDRIKQLNVDHV-T 170 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPV--YIAIHANHPYEFSEEAIAAISRLANAGI 235 + + +VDP+ I ++ ++ K A H + ++ L A I Sbjct: 171 ITIN----MVDPE-IGAKIYPWIRWKRKRFTGVEAARILHERQM-----ESLQALKEADI 220 Query: 236 ILLSQSVLLKGIND 249 + SV++ GIND Sbjct: 221 LCKVNSVMIPGIND 234 >gi|169349836|ref|ZP_02866774.1| hypothetical protein CLOSPI_00574 [Clostridium spiroforme DSM 1552] gi|169293404|gb|EDS75537.1| hypothetical protein CLOSPI_00574 [Clostridium spiroforme DSM 1552] Length = 428 Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 29/129 (22%), Positives = 47/129 (36%), Gaps = 14/129 (10%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 I R LK+ C +C +C R + K +VL+ T A Y++ Sbjct: 135 NIDRFKNTRAFLKIQDGCNNFCTYCIIPYARGRVRSRDKDSVLNQAKTLVANGYVEIVLT 194 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D L + +L L I ++ LR S ++ +I+ E+I + Sbjct: 195 GIHTAGYGED---LDNYSFYDLLVDLVKIDGLKRLRISS----IETSQISDEIINLI--- 244 Query: 204 GKPVYIAIH 212 G I H Sbjct: 245 GSNDIIVDH 253 >gi|78189894|ref|YP_380232.1| Elongator protein 3/MiaB/NifB [Chlorobium chlorochromatii CaD3] gi|78172093|gb|ABB29189.1| GTP cyclohydrolase subunit MoaA [Chlorobium chlorochromatii CaD3] Length = 333 Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 35/81 (43%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C + +LS+ + + + + I ++ FTGG+PL+ Sbjct: 24 LAVTSACNLRCGYCLSEAHEPATLHQPLLSTAELCTIIELLAKH-GIQKLRFTGGEPLLR 82 Query: 158 SHKRLQKVLKTLRYIKHVQIL 178 S + ++ R ++ + Sbjct: 83 SD--IVALIAMARQHSSIRTI 101 >gi|15898449|ref|NP_343054.1| coenzyme PQQ synthesis protein E (pqqE-2) [Sulfolobus solfataricus P2] gi|227829520|ref|YP_002831299.1| radical SAM protein [Sulfolobus islandicus L.S.2.15] gi|229578824|ref|YP_002837222.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14] gi|229582436|ref|YP_002840835.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51] gi|284997434|ref|YP_003419201.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5] gi|13814874|gb|AAK41844.1| Coenzyme PQQ synthesis protein E (pqqE-2) [Sulfolobus solfataricus P2] gi|227455967|gb|ACP34654.1| Radical SAM domain protein [Sulfolobus islandicus L.S.2.15] gi|228009538|gb|ACP45300.1| Radical SAM domain protein [Sulfolobus islandicus Y.G.57.14] gi|228013152|gb|ACP48913.1| Radical SAM domain protein [Sulfolobus islandicus Y.N.15.51] gi|284445329|gb|ADB86831.1| Radical SAM domain protein [Sulfolobus islandicus L.D.8.5] Length = 350 Score = 39.3 bits (91), Expect = 0.87, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 55/119 (46%), Gaps = 12/119 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + ++ CP+ C+ C R + L+++++ L I ++ ++FTGGD Sbjct: 7 PHLVFWEVTKACPLTCKHC-RANAIDKPLPGELNTEESRKLLEDIARFGKV-VIVFTGGD 64 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVYIAI 211 PL S + ++++ + + V + P P R++ E ++ + + + I++ Sbjct: 65 PLSRSD--IFELMEYAKSLGLVVSI-----AP--SPSHRLDDETMKIISNYARYMSISL 114 >gi|289522200|ref|ZP_06439054.1| radical SAM domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289504036|gb|EFD25200.1| radical SAM domain protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 323 Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 6/80 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C+ C ++ ++S + EA L I + I V TGG P + Sbjct: 31 LNITRRCNLCCKHCHVNA--SPKREEIMSREILEACLNVIDANN-ISVVDITGGSPEMHP 87 Query: 159 HKRLQKVLKTLRYIKHVQIL 178 L LK L +I+ Sbjct: 88 D--LAWFLKMLAR-PSRRII 104 >gi|253580717|ref|ZP_04857981.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848088|gb|EES76054.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 422 Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 31/132 (23%) Query: 96 RILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R +K+ C +C +C R + + V+ AA Y EV+ TG Sbjct: 124 RAYIKVQDGCNQFCTYCIIPYARGRVRSRKIAHVMDEVHALAAKGY-------KEVVLTG 176 Query: 152 GDPLILSH----------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 LS + L +++ + ++ ++ +R S ++P I E +Q + Sbjct: 177 I---HLSSYGVDFPAEEKETLLSLIRAVHEVEGIERIRLGS----LEPGIITEEFVQSIA 229 Query: 202 EAGKPVYIAIHA 213 K + H Sbjct: 230 ALPK---MCPHF 238 >gi|238928202|ref|ZP_04659962.1| molybdenum cofactor biosynthesis protein A [Selenomonas flueggei ATCC 43531] gi|238884162|gb|EEQ47800.1| molybdenum cofactor biosynthesis protein A [Selenomonas flueggei ATCC 43531] Length = 331 Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 45/102 (44%), Gaps = 6/102 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + CR+C V + VL+ ++ + + + +V TGG+PL+ Sbjct: 14 VSVTDCCNLRCRYCMPAHGVKKLRHADVLTYEEILRDVRALAA-LGVRKVRLTGGEPLVR 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + ++++ L+ I ++ + + ++ + EL+ Sbjct: 73 RD--ITRLVRGLKEIPGIETVALTTNGVLL--GTMMDELLDA 110 >gi|261418751|ref|YP_003252433.1| YfkB-like domain protein [Geobacillus sp. Y412MC61] gi|261375208|gb|ACX77951.1| YfkB-like domain protein [Geobacillus sp. Y412MC61] Length = 387 Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +C + C C + + L + L ++E + + TGG+P +LS Sbjct: 48 FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 103 Query: 159 HKRLQKVLKTLRYIKHVQILR 179 K +++ + L H + +R Sbjct: 104 LKSVEQYVVPLLRYAHERGVR 124 >gi|99034401|ref|ZP_01314414.1| hypothetical protein Wendoof_01000782 [Wolbachia endosymbiont of Drosophila willistoni TSC#14030-0811.24] gi|225630069|ref|YP_002726860.1| MiaB-like tRNA modifying enzyme [Wolbachia sp. wRi] gi|225592050|gb|ACN95069.1| MiaB-like tRNA modifying enzyme [Wolbachia sp. wRi] Length = 408 Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 33/161 (20%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +++ + C C FC E G+ + ++S + I+ ++ EV+FTG Sbjct: 123 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVPINS-----IIEQIRIFVENGYQEVVFTG 177 Query: 152 GDPL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D +L L +++ L+ I ++ LR S + + + ++ EL+ + + Sbjct: 178 VDITDFGTDLLGKPSLGSMIRRVLKDIPELKRLRL-SSIDVAE---VDDELMDLIANESR 233 Query: 206 PVYIAIHAN---------------HPYEFSEEAIAAISRLA 231 + +H + H E E + L Sbjct: 234 -LMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 273 >gi|42520370|ref|NP_966285.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Drosophila melanogaster] gi|42410108|gb|AAS14219.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Drosophila melanogaster] Length = 408 Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 33/161 (20%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +++ + C C FC E G+ + ++S + I+ ++ EV+FTG Sbjct: 123 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVPINS-----IIEQIRIFVENGYQEVVFTG 177 Query: 152 GDPL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D +L L +++ L+ I ++ LR S + + + ++ EL+ + + Sbjct: 178 VDITDFGTDLLGKPSLGSMIRRVLKDIPELKRLRL-SSIDVAE---VDDELMDLIANESR 233 Query: 206 PVYIAIHAN---------------HPYEFSEEAIAAISRLA 231 + +H + H E E + L Sbjct: 234 -LMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 273 >gi|58696768|ref|ZP_00372305.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Drosophila simulans] gi|58537042|gb|EAL60178.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Drosophila simulans] Length = 375 Score = 39.3 bits (91), Expect = 0.88, Method: Composition-based stats. Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 33/161 (20%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +++ + C C FC E G+ + ++S + I+ ++ EV+FTG Sbjct: 90 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVPINS-----IIEQIRIFVENGYQEVVFTG 144 Query: 152 GDPL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D +L L +++ L+ I ++ LR S + + + ++ EL+ + + Sbjct: 145 VDITDFGTDLLGKPSLGSMIRRVLKDIPELKRLRL-SSIDVAE---VDDELMDLIANESR 200 Query: 206 PVYIAIHAN---------------HPYEFSEEAIAAISRLA 231 + +H + H E E + L Sbjct: 201 -LMPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 240 >gi|325265342|ref|ZP_08132066.1| 2-methylthioadenine synthetase [Clostridium sp. D5] gi|324029343|gb|EGB90634.1| 2-methylthioadenine synthetase [Clostridium sp. D5] Length = 440 Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 11/126 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 LK+ C +C +C ++ G+ + + + Y+ E+ ++ L Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFR--SVPMEKLLKEAQYLAEQGVKELILVAQETTLY 203 Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAI 211 K L +LK L ++ ++ +R V P+ I ELIQ +KE K Y+ + Sbjct: 204 GKDIYGEKSLHLLLKELCRVQGIRWIR----VLYCYPEEITDELIQVMKEEEKICHYLDL 259 Query: 212 HANHPY 217 H Sbjct: 260 PIQHAN 265 >gi|323488006|ref|ZP_08093259.1| molybdenum cofactor biosynthesis protein A [Planococcus donghaensis MPA1U2] gi|323398274|gb|EGA91067.1| molybdenum cofactor biosynthesis protein A [Planococcus donghaensis MPA1U2] Length = 338 Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ G K +LS ++ + ++ TGG+ Sbjct: 19 ISVTDRCNFRCSYCMPKEVFGDDYAFLPKQELLSFEEIHRLTKVFVAM-GVKKIRLTGGE 77 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++++ + ++ V+ + Sbjct: 78 PLM--RRGLPQLVEKILSVEGVEDI 100 >gi|257064192|ref|YP_003143864.1| pyruvate-formate lyase-activating enzyme [Slackia heliotrinireducens DSM 20476] gi|256791845|gb|ACV22515.1| pyruvate-formate lyase-activating enzyme [Slackia heliotrinireducens DSM 20476] Length = 201 Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 31/77 (40%), Gaps = 1/77 (1%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ C C C E+ + + + AL + + S + FTGGD Sbjct: 15 PGSRIVVWTVGCSKRCPGCANPELWEASDANRIDNDQLAEALVRMAKASGTRAITFTGGD 74 Query: 154 PLILSHKRLQKVLKTLR 170 PL L VL+++R Sbjct: 75 PLEQPDD-LAWVLRSIR 90 >gi|225018731|ref|ZP_03707923.1| hypothetical protein CLOSTMETH_02681 [Clostridium methylpentosum DSM 5476] gi|224948459|gb|EEG29668.1| hypothetical protein CLOSTMETH_02681 [Clostridium methylpentosum DSM 5476] Length = 409 Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 15/118 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R +K+ C YC +C + G + ++ + L + V+ Sbjct: 122 RTRAFVKIEDGCDRYCTYCIIPKARGPVRSKQMA--ELREELRDLAANGYKEVVLVGINL 179 Query: 151 ---GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L + RL ++ + ++ +R S ++P+ + E IQ L K Sbjct: 180 SSYGRD---LENTRLIDAVRLACSVDGIERVRLGS----LEPELLTGEDIQTLASLPK 230 >gi|167760764|ref|ZP_02432891.1| hypothetical protein CLOSCI_03149 [Clostridium scindens ATCC 35704] gi|167661651|gb|EDS05781.1| hypothetical protein CLOSCI_03149 [Clostridium scindens ATCC 35704] Length = 476 Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 80/222 (36%), Gaps = 62/222 (27%) Query: 56 IARQFIPQKEE--LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113 I + P EE L I + ED +G + G++ Y C C FCF Sbjct: 59 IRK---PDGEEWLLEIDKDYDED-LGLEFDN---GLMSEYR---------TCSNKCIFCF 102 Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173 +M + T+ Y ++ + F G+ + L++ +++ + Sbjct: 103 IDQMPPGMRETL-----------YFKDDDS--RLSFLQGNYITLTNMKMEDI-------- 141 Query: 174 HVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 +I++ H + Q NPEL + L H F+ E + + L Sbjct: 142 -QRIVKMHLAPINISIQSTNPELRCKML-----------H----NRFAGEKLQFLDVLYE 185 Query: 233 AGIILLSQSVLLKGINDDPE---ILANLMRTFVELR---IKP 268 I + Q V K +ND PE + +L R +R + P Sbjct: 186 NHIEMNGQVVACKNVNDGPELERTIDDLSRYLPFMRSVSVVP 227 >gi|297584204|ref|YP_003699984.1| molybdenum cofactor biosynthesis protein A [Bacillus selenitireducens MLS10] gi|297142661|gb|ADH99418.1| molybdenum cofactor biosynthesis protein A [Bacillus selenitireducens MLS10] Length = 339 Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 7/85 (8%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F + K +LS ++ + +++ I ++ TGG+ Sbjct: 18 ISVTDKCNFRCSYCMPPEIFDKYFKFLPKDEILSFEEITRLSTIMVKEAGIRKLRVTGGE 77 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + K++ L I+ V + Sbjct: 78 PLM--RHEVSKLIAMLNKIEGVDDI 100 >gi|91775006|ref|YP_544762.1| tRNA-i(6)A37 modification enzyme MiaB [Methylobacillus flagellatus KT] gi|122985599|sp|Q1H3L6|MIAB_METFK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|91708993|gb|ABE48921.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylobacillus flagellatus KT] Length = 442 Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 46/137 (33%), Gaps = 26/137 (18%) Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 H P R+ L ++ C YC FC G + TEA + + Sbjct: 140 HLPPPRVEGAAAFLSIMEGCSKYCTFCVVPYTRGDEVSRPFDDILTEAIQ---LAEQGVK 196 Query: 146 EVIFTG----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195 E+ G D + L +++ L I ++ +R+ + P + P Sbjct: 197 EITLLGQNVNGYRSETADGEMAD---LALLIEYLAEIPEIERIRYTTSH----PNEMTPA 249 Query: 196 LIQCLKEAGKPVYIAIH 212 LI C K + +H Sbjct: 250 LIDCYARIPK-LVSHLH 265 >gi|49085554|gb|AAT51287.1| PA2956 [synthetic construct] Length = 299 Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152 ++L + + C C FC + +Q ++D L I+ + + V G Sbjct: 24 LILPVTNGCSWNKCGFC----EMYTQPQKKFRARDENEVLEEIRRCGERLIVKRVFLADG 79 Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178 D L+L +RL VL+ +R + V+ + Sbjct: 80 DALVLPTRRLLAVLQAIREHLPEVERV 106 >gi|255994803|ref|ZP_05427938.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Eubacterium saphenum ATCC 49989] gi|255993516|gb|EEU03605.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Eubacterium saphenum ATCC 49989] Length = 484 Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 31/143 (21%), Positives = 52/143 (36%), Gaps = 16/143 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C YC +C V Q + E A +++ E++ TG + Sbjct: 184 RKRAYIKIQDGCDRYCTYCIIAH-VRGQVRSKKVDDIYEEAKKLVED--GYREIVLTGIN 240 Query: 154 -PLILSH------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 L K + V+ + I +R S P V +N E I +K K Sbjct: 241 TALYGEDLHQGIGKSMVDVINKISTIPGDFRIRIGSLEPTV----VNKEYINLIKNLPK- 295 Query: 207 VYIAIHANHPYEFSEEAIAAISR 229 + H + S + +AA+ R Sbjct: 296 LCRHAHLS-VQSGSNDVLAAMGR 317 >gi|124005079|ref|ZP_01689921.1| molybdenum cofactor biosynthesis protein A [Microscilla marina ATCC 23134] gi|123989331|gb|EAY28892.1| molybdenum cofactor biosynthesis protein A [Microscilla marina ATCC 23134] Length = 334 Score = 39.3 bits (91), Expect = 0.89, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 70/180 (38%), Gaps = 21/180 (11%) Query: 99 LKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C E + K +LS ++ E + + + ++ TGG+P + Sbjct: 20 LAVTDRCNLRCFYCMPEEGIKYLPKKHLLSYEEMERLVRLLASM-GVNKIRLTGGEPFLR 78 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQRINPEL------IQCLKEAGKPVY 208 L ++T+R I+ + L + + P + + + L + Sbjct: 79 KD--LINFMQTIRNIEGINELNITTNGVLTEQYIPAMVKMGISSVNLSLDTLDKERF--- 133 Query: 209 IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN-DDPEILANLMRTFVELRIK 267 + EF + + + L +GI V++ G N +D LA L RT + ++ Sbjct: 134 --LKITRRNEFDK-VMRCLDALIESGIKTKINMVVMAGQNTEDIVPLAELTRT-HAIGVR 189 >gi|319646960|ref|ZP_08001188.1| hypothetical protein HMPREF1012_02225 [Bacillus sp. BT1B_CT2] gi|317391019|gb|EFV71818.1| hypothetical protein HMPREF1012_02225 [Bacillus sp. BT1B_CT2] Length = 373 Score = 39.3 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 16/123 (13%) Query: 58 RQFIPQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116 Q P E + + D GD + ++ +C + C C Sbjct: 5 MQVRPITPEYDPWEAYMDVDQFGDIQLTNVE-----------FTTTTLCNMRCEHCAVGY 53 Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 + ++ L L I ++ + TGG+P +LS K +++ + L H + Sbjct: 54 TLQTKDPDALPVSLLLKRLDEI---PRLRSLSITGGEP-MLSLKSVKEYVVPLLKYAHER 109 Query: 177 ILR 179 +R Sbjct: 110 GVR 112 >gi|304315571|ref|YP_003850716.1| radical SAM protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302777073|gb|ADL67632.1| Radical SAM domain protein [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 378 Score = 39.3 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 18/79 (22%), Positives = 38/79 (48%), Gaps = 7/79 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA----YIQEKS--QIWEVI 148 + I+ K+ + C + C++C+R+ + LS + E A YI+ + + + Sbjct: 13 NSIIFKVTNSCNLDCQYCYRK-KAKLENKQKLSLEILEKAFRDYSNYIEANNLDKTMNFV 71 Query: 149 FTGGDPLILSHKRLQKVLK 167 + GG+PLI+ K++ Sbjct: 72 WHGGEPLIVDIDFYNKIIS 90 >gi|288869733|ref|ZP_05975994.2| arylsulfatase regulator [Methanobrevibacter smithii DSM 2374] gi|288861360|gb|EFC93658.1| arylsulfatase regulator [Methanobrevibacter smithii DSM 2374] Length = 376 Score = 39.3 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 12/125 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPL 155 +++ C C++C+ E + + + ++++ + F GG+PL Sbjct: 5 VMIIPTLGCQCNCKYCWGSESTKEMMDINV----IDDIITWLKDFRDDKVHFTFHGGEPL 60 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 + + + L+ L I +++ S + ++ ELI + V ++ + Sbjct: 61 LAGYDFYAEALEKLSKIDNLEGFSLQS---NIW--LLSDELIDLFLKY--NVAVSTSIDG 113 Query: 216 PYEFS 220 P E + Sbjct: 114 PEEIN 118 >gi|163757739|ref|ZP_02164828.1| RNA modification enzyme, MiaB family protein [Hoeflea phototrophica DFL-43] gi|162285241|gb|EDQ35523.1| RNA modification enzyme, MiaB family protein [Hoeflea phototrophica DFL-43] Length = 480 Score = 39.3 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 45/131 (34%), Gaps = 22/131 (16%) Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQ 121 E E++ D + D + G + L + C +C FC R V Sbjct: 149 ETEFPTEDKFDRLPDASA----GTIRTRGVTAFLTVQEGCDKFCTFCVVPYTRGAEVSRP 204 Query: 122 KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP----LILSHKR---LQKVLKTLRYIKH 174 ++S + AA + EV G + S R L +++ L I+ Sbjct: 205 VERIMSEAERLAAA-------GVREVTLLGQNVNAWHGQGSDGREWGLGELVHRLAAIEG 257 Query: 175 VQILRFHSRVP 185 + +R+ + P Sbjct: 258 IDRIRYTTSHP 268 >gi|187927999|ref|YP_001898486.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii 12J] gi|187724889|gb|ACD26054.1| molybdenum cofactor biosynthesis protein A [Ralstonia pickettii 12J] Length = 373 Score = 39.3 bits (91), Expect = 0.90, Method: Composition-based stats. Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 7/77 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +++ +LS ++ E E + ++ TGG+ Sbjct: 48 VSVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMARLFIEH-GVEKIRLTGGE 106 Query: 154 PLILSH-KRLQKVLKTL 169 PL+ +RL ++L L Sbjct: 107 PLLRKDIERLVEMLARL 123 >gi|328871501|gb|EGG19871.1| molybdenum cofactor synthesis 1 [Dictyostelium fasciculatum] Length = 431 Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 29/168 (17%), Positives = 74/168 (44%), Gaps = 20/168 (11%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R + + L C + C++C E V Q +++ ++ L+ + + + ++ FT Sbjct: 109 RKHTYLRISLTERCNLRCQYCMPEEGVQLQPSENIMTDQEIIK-LSRLFVSAGVTKIRFT 167 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-I 209 GG+PL+ K ++ +++ + IK ++ + + ++ L++AG + I Sbjct: 168 GGEPLV--RKNIESMIEEIGKIKGLETIAMTTNAIA------LGRKLERLQKAGLNLLNI 219 Query: 210 AIHANHPYEFS--------EEAIAAISRLANAGI-ILLSQSVLLKGIN 248 ++ +F+ ++ +I + + G + V++K IN Sbjct: 220 SLDTLDANKFTIITRRLGWDKVKESIDKALSLGFNPVKINCVVMKNIN 267 >gi|319765567|ref|YP_004131068.1| YfkB-like domain-containing protein [Geobacillus sp. Y412MC52] gi|317110433|gb|ADU92925.1| YfkB-like domain-containing protein [Geobacillus sp. Y412MC52] Length = 374 Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +C + C C + + L + L ++E + + TGG+P +LS Sbjct: 35 FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 90 Query: 159 HKRLQKVLKTLRYIKHVQILR 179 K +++ + L H + +R Sbjct: 91 LKSVEQYVVPLLRYAHERGVR 111 >gi|323344658|ref|ZP_08084882.1| translation initiation factor IF-1 [Prevotella oralis ATCC 33269] gi|323093928|gb|EFZ36505.1| translation initiation factor IF-1 [Prevotella oralis ATCC 33269] Length = 72 Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ +E G +I+ ISG + YI LPG KV++ +++ K G Sbjct: 22 FRVELENGVQII----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70 >gi|307243292|ref|ZP_07525459.1| MiaB-like protein [Peptostreptococcus stomatis DSM 17678] gi|306493310|gb|EFM65296.1| MiaB-like protein [Peptostreptococcus stomatis DSM 17678] Length = 431 Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 21/128 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R +K+ C YC +C + + S+D ++ + I+ + EV+ TG Sbjct: 141 KTRAFIKIQDGCDRYCSYC-----IIPYARGRIRSRDRQSIIEEIEKLAANGYKEVVLTG 195 Query: 152 GDPLILSHKRLQKVLKTLRYIKHV------QILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + L + + L IK V + +R S V+P + I + + K Sbjct: 196 IHVASYG-RDLDEDIDILTVIKDVNKVEGIERIRLSS----VEPVLFTEDFIDQISKIDK 250 Query: 206 PVYIAIHA 213 + H Sbjct: 251 ---LVPHY 255 >gi|78042734|ref|YP_360230.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Carboxydothermus hydrogenoformans Z-2901] gi|123576193|sp|Q3ACA4|MIAB_CARHZ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|77994849|gb|ABB13748.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Carboxydothermus hydrogenoformans Z-2901] Length = 440 Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 28/166 (16%), Positives = 62/166 (37%), Gaps = 29/166 (17%) Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGI-VHRYPD-RILLKLLHVCPVYCRFCFRREMV 118 +P+ E ER + + ++GI V R P R + +++ C +C +C + Sbjct: 113 LPKILERVFEKHERVLEVWQSEGQIVEGIPVKREPGVRAWVTIMYGCNNFCTYCIVPYVR 172 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-----------PLILSHKRLQKVLK 167 G ++ +D + + EV G + P+ ++L Sbjct: 173 GRERSR--KKEDILQEIRQLVA-EGYREVTLLGQNVNSYGKDLKGKPMF------AELLA 223 Query: 168 TLRYIKHVQILRFHSRVPIVDPQR-INPELIQCLKEAGKPVYIAIH 212 + I + +RF + P R + ++I+ + + K + +H Sbjct: 224 DIEKIDGLWRVRFTTSHP-----RDLTDDVIEVMASSRK-ICEHLH 263 >gi|32476670|ref|NP_869664.1| 2-methylthioadenine synthetase [Rhodopirellula baltica SH 1] gi|81659389|sp|Q7UK39|RIMO_RHOBA RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|32447216|emb|CAD77042.1| conserved hypothetical protein-putative 2-methylthioadenine synthetase [Rhodopirellula baltica SH 1] Length = 477 Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 16/118 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDP 154 LK+ C C FC + +G S E + + S + EV+ D Sbjct: 179 AYLKISEGCDRLCTFC----AIPKMRGKHFSKP-IEQIIDEAKRLGDSGVREVVIVAQDT 233 Query: 155 LILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 R L ++LK L I+ + +R P I+ LI L A + V Sbjct: 234 TYYGMDRYGEPRLNQLLKELDKIESIDWIRL----MYFYPMYIDDALIDTLASARRIV 287 >gi|15598152|ref|NP_251646.1| hypothetical protein PA2956 [Pseudomonas aeruginosa PAO1] gi|116050958|ref|YP_790217.1| hypothetical protein PA14_25810 [Pseudomonas aeruginosa UCBPP-PA14] gi|218890846|ref|YP_002439710.1| putative oxidase [Pseudomonas aeruginosa LESB58] gi|254235931|ref|ZP_04929254.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|254241666|ref|ZP_04934988.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|296388552|ref|ZP_06878027.1| putative oxidase [Pseudomonas aeruginosa PAb1] gi|313108140|ref|ZP_07794275.1| putative oxidase [Pseudomonas aeruginosa 39016] gi|9949053|gb|AAG06344.1|AE004721_12 conserved hypothetical protein [Pseudomonas aeruginosa PAO1] gi|115586179|gb|ABJ12194.1| putative oxidase [Pseudomonas aeruginosa UCBPP-PA14] gi|126167862|gb|EAZ53373.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719] gi|126195044|gb|EAZ59107.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192] gi|218771069|emb|CAW26834.1| putative oxidase [Pseudomonas aeruginosa LESB58] gi|310880777|gb|EFQ39371.1| putative oxidase [Pseudomonas aeruginosa 39016] Length = 298 Score = 39.3 bits (91), Expect = 0.91, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 38/87 (43%), Gaps = 9/87 (10%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---IWEVIFTGG 152 ++L + + C C FC + +Q ++D L I+ + + V G Sbjct: 24 LILPVTNGCSWNKCGFC----EMYTQPQKKFRARDENEVLEEIRRCGERLIVKRVFLADG 79 Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQIL 178 D L+L +RL VL+ +R + V+ + Sbjct: 80 DALVLPTRRLLAVLQAIREHLPEVERV 106 >gi|302385460|ref|YP_003821282.1| molybdenum cofactor biosynthesis protein A [Clostridium saccharolyticum WM1] gi|302196088|gb|ADL03659.1| molybdenum cofactor biosynthesis protein A [Clostridium saccharolyticum WM1] Length = 322 Score = 39.3 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 38/85 (44%), Gaps = 4/85 (4%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E +V G +L+ + + I +V TGG+PL+ Sbjct: 14 ISVTDRCNLRCVYCMPEEGIVPMSHGDILTYHEILRICEA-GARLGIRKVKVTGGEPLVR 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182 ++ ++K L+ I ++ + + Sbjct: 73 KD--IEVLIKGLQSIPGIEDVTMTT 95 >gi|282881461|ref|ZP_06290135.1| MiaB-like protein [Prevotella timonensis CRIS 5C-B1] gi|281304687|gb|EFA96773.1| MiaB-like protein [Prevotella timonensis CRIS 5C-B1] Length = 455 Score = 39.3 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 42/125 (33%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C +C K E A A E++ TG Sbjct: 163 RTRYFLKVQDGCNYFCTYCTIPFARGFSRNPSIDFLVKQAEQAAA-----EGGKEIVLTG 217 Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + +++ ++K L ++ ++ R S ++P I+ ELI + Sbjct: 218 VNIGEFGESTNETFLDLVKALDQVQGIKRFRISS----LEPDLIDDELIDYCAHSR---A 270 Query: 209 IAIHA 213 H Sbjct: 271 FMPHF 275 >gi|56418960|ref|YP_146278.1| hypothetical protein GK0425 [Geobacillus kaustophilus HTA426] gi|56378802|dbj|BAD74710.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426] Length = 374 Score = 39.3 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +C + C C + + L + L ++E + + TGG+P +LS Sbjct: 35 FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 90 Query: 159 HKRLQKVLKTLRYIKHVQILR 179 K +++ + L H + +R Sbjct: 91 LKSVEQYVVPLLRYAHERGVR 111 >gi|297531281|ref|YP_003672556.1| YfkB-like domain protein [Geobacillus sp. C56-T3] gi|297254533|gb|ADI27979.1| YfkB-like domain protein [Geobacillus sp. C56-T3] Length = 374 Score = 39.3 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +C + C C + + L + L ++E + + TGG+P +LS Sbjct: 35 FTTTTLCNMRCEHCAVGYTLTMKDPEALP---LDMLLRRLEEIPHLRSLSITGGEP-MLS 90 Query: 159 HKRLQKVLKTLRYIKHVQILR 179 K +++ + L H + +R Sbjct: 91 LKSVEQYVVPLLRYAHERGVR 111 >gi|253699518|ref|YP_003020707.1| hopanoid biosynthesis associated radical SAM protein HpnH [Geobacter sp. M21] gi|251774368|gb|ACT16949.1| hopanoid biosynthesis associated radical SAM protein HpnH [Geobacter sp. M21] Length = 332 Score = 39.3 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 19/87 (21%), Positives = 38/87 (43%), Gaps = 7/87 (8%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 + +YP ++L+ H+C + C C R ++S + L + E V Sbjct: 23 IEKYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMS---LKQCLDSVDECPAP-VVTI 78 Query: 150 TGGDPLILSHKRLQKVLKT-LRYIKHV 175 TGG+P + + ++++ L KH+ Sbjct: 79 TGGEPFLYP--HIFQLIEKVLARGKHI 103 >gi|154174160|ref|YP_001409198.1| radical SAM family protein [Campylobacter curvus 525.92] gi|112803526|gb|EAU00870.1| radical SAM [Campylobacter curvus 525.92] Length = 417 Score = 39.3 bits (91), Expect = 0.92, Method: Composition-based stats. Identities = 23/111 (20%), Positives = 39/111 (35%), Gaps = 6/111 (5%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 D + L C C FCF +K + A ++ + V TGG+P Sbjct: 67 DTHSVYLSLKCNKNCYFCFNPNQDDFKKDVKRKFAAKQIANKILKNNQNVKFVALTGGEP 126 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L+ L+ I + H R + I+ + ++ LK +G Sbjct: 127 LLYKDDALE-----FFKIINESNTTIHKR-LYTNGTLIDTKYLKKLKSSGL 171 >gi|330503007|ref|YP_004379876.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01] gi|328917293|gb|AEB58124.1| coproporphyrinogen III oxidase [Pseudomonas mendocina NK-01] Length = 460 Score = 39.3 bits (91), Expect = 0.93, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 75/196 (38%), Gaps = 22/196 (11%) Query: 44 ANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLH 103 A+LI ++ P P + + D + S R R L +H Sbjct: 9 ADLIRRYDLAGP-RYTSYPTAVQFHDAIG-PFDLLHALRDS-------RKAGRPLSLYVH 59 Query: 104 V--CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + C C +C +++ +G L ++ E YI + I ++ F GG P Sbjct: 60 IPFCAHICYYCACNKVITKDRGRALPYLEKLEREIEIVSRYIDKNQPIEQLHFGGGTPTF 119 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANH 215 LSH L+++++ LR ++ +DP+ + + L+E G V + + Sbjct: 120 LSHDELRRLMQHLRQHFNLLDDDSGDYSIEIDPREADWSTMGLLRELGFNRVSLGV---- 175 Query: 216 PYEFSEEAIAAISRLA 231 + E A++RL Sbjct: 176 -QDLDPEVQRAVNRLQ 190 >gi|258513433|ref|YP_003189655.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257777138|gb|ACV61032.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 452 Score = 39.3 bits (91), Expect = 0.93, Method: Composition-based stats. Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRRE-MVGSQKGTVL---S 127 EDP+ +N++ P +G+V + L L L H C + CR+CF + G + Sbjct: 73 FSEDPLQNNDYLPGEGVV-----KALCLHLAHDCNMRCRYCFAGQGKFGGSSDLMPLNVG 127 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVL 166 K E + + I EV F GG+PL ++ K LQ ++ Sbjct: 128 KKAMEFLIKSSGSRRNI-EVDFFGGEPL-MNFKVLQDLV 164 >gi|169828828|ref|YP_001698986.1| hypothetical protein Bsph_3362 [Lysinibacillus sphaericus C3-41] gi|168993316|gb|ACA40856.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41] Length = 370 Score = 39.3 bits (91), Expect = 0.93, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +C + C C + ++ L + L + E + + TGG+P ++S Sbjct: 33 FTTTTLCNMRCAHCAVGYTLQNKDPEALP---IDLILQRLDEIPHLKTLSITGGEP-MMS 88 Query: 159 HKRLQKVLKTLRYIKHVQILR 179 K +Q + L H + +R Sbjct: 89 KKSVQSYVLPLLKYAHERGVR 109 >gi|327480469|gb|AEA83779.1| molybdenum cofactor biosynthesis protein A [Pseudomonas stutzeri DSM 4166] Length = 331 Score = 39.3 bits (91), Expect = 0.94, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 67/167 (40%), Gaps = 29/167 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C +C +MV + + +L+ ++ A + + TGG+PL+ Sbjct: 19 LSVTDRCDFRCTYCMSEDMVFAPRAQILTLEELYAVADAFIS-LGVKRIRVTGGEPLV-- 75 Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 K L +L L ++ L S++P L L+EAG + I + Sbjct: 76 RKGLTGLLARLGARNELEDLAITTNGSQLP---------SLAASLREAGVR-RLNISLDS 125 Query: 216 PY-----EFS-----EEAIAAISRLANAGI--ILLSQSVLLKGINDD 250 E + ++ + I +AG I L+ SV+ KG NDD Sbjct: 126 LKRERFAELTRRDRLDQVLEGIEAARSAGFKRIKLN-SVVQKGRNDD 171 >gi|295400597|ref|ZP_06810575.1| YfkB-like domain protein [Geobacillus thermoglucosidasius C56-YS93] gi|294977500|gb|EFG53100.1| YfkB-like domain protein [Geobacillus thermoglucosidasius C56-YS93] Length = 374 Score = 39.3 bits (91), Expect = 0.94, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 16/119 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +C + C C + ++ L + + ++E + + TGG+P +LS Sbjct: 35 FTTTTLCNMRCEHCAVGYTLQTKDPEALP---LDLLIKRLEEIPHLRSLSITGGEP-MLS 90 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215 K + + L H + +R ++N L L K P +H +H Sbjct: 91 LKSVDNYVVPLLKYAHERGVR----------TQLNSNLTLELDRYEKVIPYLDVLHISH 139 >gi|225374900|ref|ZP_03752121.1| hypothetical protein ROSEINA2194_00523 [Roseburia inulinivorans DSM 16841] gi|225213283|gb|EEG95637.1| hypothetical protein ROSEINA2194_00523 [Roseburia inulinivorans DSM 16841] Length = 480 Score = 39.3 bits (91), Expect = 0.94, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 58/134 (43%), Gaps = 23/134 (17%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + +Y + + ++ C +C +C + G ++ K+ + ++ + + EV+ Sbjct: 183 VERKYSFKSGVNIMFGCNNFCSYCIVPYVRGRERSREP--KEIVREIEHLVQD-GVVEVM 239 Query: 149 FTGGD----------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 G + P+ ++L+ + I+ ++ +RF + P+ ++ ELI+ Sbjct: 240 LLGQNVNSYGRNLEHPMTF-----AQLLQEIEKIEGLERIRFMTSH----PKDLSDELIE 290 Query: 199 CLKEAGKPVYIAIH 212 +K + K + +H Sbjct: 291 VMKNS-KKICNHLH 303 >gi|317473569|ref|ZP_07932859.1| radical SAM domain-containing protein [Anaerostipes sp. 3_2_56FAA] gi|316898971|gb|EFV20995.1| radical SAM domain-containing protein [Anaerostipes sp. 3_2_56FAA] Length = 171 Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 13/146 (8%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVY-CRFC-FRREMVGSQKGTVL 126 E + + + +G+V+R P ++++ C C FC +E + Sbjct: 12 ENKTESYQEERQMEYEGMVYRPPSEAYSLIIQVTIGCSQNDCIFCNMYKEKRFRMRPLQD 71 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILR-FHSRV 184 D A Y + I ++ GD LI ++ L ++LK +R I + + + S Sbjct: 72 VLADFREAREY---YNSIGKIFLADGDALICKNEYLNEILKYIREEIPECRQVTCYASPK 128 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIA 210 ++ E ++ L+E G + Sbjct: 129 SVMIK---TKEELRELRENGLDMVYM 151 >gi|228985631|ref|ZP_04145784.1| antilisterial bacteriocin (subtilosin) production [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] gi|228774026|gb|EEM22439.1| antilisterial bacteriocin (subtilosin) production [Bacillus thuringiensis serovar tochigiensis BGSC 4Y1] Length = 86 Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 5/77 (6%) Query: 79 GDNNHSPLKGIVHR--YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 + + P+ I + YP +++ + C V CR C+ G+ K V+S ++ L Sbjct: 7 EEPINVPVNLIEEQTIYPKVASIEITNRCNVRCRHCYGD--FGAVKPKVMSLDQIKSLLD 64 Query: 137 YIQEKSQIWEVIFTGGD 153 + + + TGGD Sbjct: 65 DL-NHIGVKLIELTGGD 80 >gi|221111831|ref|XP_002167227.1| PREDICTED: similar to predicted protein [Hydra magnipapillata] Length = 802 Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 34/172 (19%), Positives = 72/172 (41%), Gaps = 24/172 (13%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R + + + L C + C +C E V + K +L++++ LA + + ++ T Sbjct: 104 RKHNYLRISLTERCNLRCGYCMPEEGVLLTNKDDLLTNEEMIR-LARLFVFEGVNKIRLT 162 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PV 207 GG+PL+ + ++ L +K ++ L + + + + LK+AG + Sbjct: 163 GGEPLVRKD--IVQICDQLSSLKGLKTLAITTNGLVA------EQKLLYLKQAGLTNVNI 214 Query: 208 YIAIHANHPYEFS------EEAIAAISR---LANAGIILLSQSVLLKGINDD 250 + +EF + AI + L + + V++KG+NDD Sbjct: 215 SLDTMIEKKFEFISRRKGLTKVFNAIEKAIELKFNSVKINC--VVMKGLNDD 264 >gi|186475181|ref|YP_001856651.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Burkholderia phymatum STM815] gi|229890465|sp|B2JD88|MIAB_BURP8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|184191640|gb|ACC69605.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phymatum STM815] Length = 456 Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 42/127 (33%), Gaps = 21/127 (16%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD- 153 + ++ C YC +C V S+ + L I + EV G + Sbjct: 149 AFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQGVREVTLLGQNV 203 Query: 154 -----PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + L + +++ + I ++ +R+ + P+ LI + K Sbjct: 204 NAYRGAMTLGATEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQRLIDTYAKVPK 259 Query: 206 PVYIAIH 212 + +H Sbjct: 260 -LVSHLH 265 >gi|78045218|ref|YP_360312.1| radical SAM protein [Carboxydothermus hydrogenoformans Z-2901] gi|123770585|sp|Q3AC22|RLMN_CARHZ RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|77997333|gb|ABB16232.1| radical SAM enzyme, Cfr family [Carboxydothermus hydrogenoformans Z-2901] Length = 342 Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 50/246 (20%), Positives = 87/246 (35%), Gaps = 44/246 (17%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEV 147 + +RY + + L C + C+FC +G + + + E L S+ I V Sbjct: 95 LKYRYGNTVCLSTQVGCKMGCKFCATG--LGGFSRNLTAGEMIEQILVLKASSSEKITRV 152 Query: 148 IFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD-----PQRINPELIQCLK 201 + G G+PL +VLK +R I L R V PQ I+ L Sbjct: 153 VLMGSGEPL----DNFTEVLKFMRKINEKDCLNISYRKITVSTCGMVPQ------IKALA 202 Query: 202 EAGKPVYIAIHANHP-----YEFSEEAIA-AISRLANAGIILLSQS--------VLLKGI 247 E PV +AI + P E ++ L +A + ++ L++ + Sbjct: 203 EEKLPVTLAISLHAPDDALRNELIPINKRWGLAELLDAAWYFIDKTGRRVSFEYALIENV 262 Query: 248 NDDPE----ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 ND E + L R V + + PY +F+ E + ++ +G Sbjct: 263 NDTVEHALKLAQLLQRKLVHVNLIPY------NTIEKRNFKTPSVEKINKFKEVLKR-AG 315 Query: 304 LCQPFY 309 + Sbjct: 316 IPVTVR 321 >gi|89100455|ref|ZP_01173317.1| hypothetical protein B14911_05476 [Bacillus sp. NRRL B-14911] gi|89084798|gb|EAR63937.1| hypothetical protein B14911_05476 [Bacillus sp. NRRL B-14911] Length = 450 Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G ++ S+D + + Q+ + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEVIRQAQQLVDAGYKEIVLTG 196 Query: 151 ------GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + L +L+ L +K ++ LR S ++ +I E+I+ + ++ Sbjct: 197 IHTGGYGED---MKDYNLAMLLRDLEAQVKGLKRLRISS----IEASQITDEVIEVMDKS 249 Query: 204 GKPVYIAIHA 213 V +H Sbjct: 250 EV-VVRHLHI 258 >gi|315608941|ref|ZP_07883913.1| arylsulfatase-activating protein AtsB [Prevotella buccae ATCC 33574] gi|315249321|gb|EFU29338.1| arylsulfatase-activating protein AtsB [Prevotella buccae ATCC 33574] Length = 390 Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 47/177 (26%) Query: 101 LLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFT--GGDP 154 + C + C++C+ + + + V+S + E YIQ ++ + +V+FT GG+P Sbjct: 1 MGASCNLRCKYCYYLEKSHLYRNAPARVMSDELLERFVQEYIQAQT-MSQVLFTWHGGEP 59 Query: 155 LILSHKRLQKVLKTL---------RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L+ + L K + R I + + + + E + KE Sbjct: 60 LM---RPLSFYRKAVALQEKYAFGRQIDN----TIQTNGTL-----LTDEWCEFFKEHNW 107 Query: 206 PVYIAIHANHPYEFSEE-------------AIAAISRLANAGIILLSQSVLLKGIND 249 V I+ + P EF +E + I L G+ + +V +ND Sbjct: 108 LVGIS--IDGPQEFHDEYRRTASDKPSWQKVMRGIRLLRKHGVEWNAMAV----VND 158 >gi|306820795|ref|ZP_07454420.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551185|gb|EFM39151.1| radical SAM domain protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 457 Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C +CF + ++S + + AL Y+ E S EV F GG+PL Sbjct: 99 LHVAHDCNLRCSYCFASQGDFGGDKEIMSLEVGKKALDYLVEHSGNRRNLEVDFFGGEPL 158 Query: 156 I 156 + Sbjct: 159 M 159 >gi|319762446|ref|YP_004126383.1| molybdenum cofactor biosynthesis protein a [Alicycliphilus denitrificans BC] gi|330825703|ref|YP_004389006.1| molybdenum cofactor biosynthesis protein A [Alicycliphilus denitrificans K601] gi|317117007|gb|ADU99495.1| molybdenum cofactor biosynthesis protein A [Alicycliphilus denitrificans BC] gi|329311075|gb|AEB85490.1| molybdenum cofactor biosynthesis protein A [Alicycliphilus denitrificans K601] Length = 389 Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 15/92 (16%), Positives = 32/92 (34%), Gaps = 14/92 (15%) Query: 92 RYPDRIL------LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQE 140 Y R + + C C +C F + +LS ++ Sbjct: 41 LYDTRARPLRDLRISVTDRCNFRCSYCMPKEVFDKHYRYLPHSDLLSFEEITRLARLFMA 100 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 + ++ TGG+PL+ L+ +++ L + Sbjct: 101 H-GVHKIRLTGGEPLLRKD--LELLVEQLAGL 129 >gi|289667851|ref|ZP_06488926.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 343 Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 35/187 (18%), Positives = 62/187 (33%), Gaps = 32/187 (17%) Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125 LP+ P+ D PL+ + L ++ C C +C + V G Sbjct: 6 LPDLLTAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGFDSQQR 57 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS--- 182 LS E + + +V TGG+PL+ L ++ L I+ ++ L + Sbjct: 58 LSFDQLETLVRAFVS-VGVTKVRLTGGEPLLRRD--LPSLIARLGAIEGIEDLALTTNGT 114 Query: 183 ---RVPIVDPQ----RIN-------PELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 R + Q RI P L + + + + E + I+ Sbjct: 115 LLARQAVALRQAGLRRITVSMDALEPALFRRMSGDRGEIAQVLAGIAAAELAGFQRLKIN 174 Query: 229 RLANAGI 235 + GI Sbjct: 175 CVVQRGI 181 >gi|265750577|ref|ZP_06086640.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] gi|263237473|gb|EEZ22923.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA] Length = 368 Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 61/165 (36%), Gaps = 32/165 (19%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 R P +L C + C CF R V + G + + +Q+ ++ + Sbjct: 20 QSRVPITTNFELTPTCTLNCDMCFIRTERSVVERHGGLSPLQQWLDWAEQLQDMGTLF-I 78 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYI---------------KHVQILRFHSRVPIVDPQRI 192 + TGG+P++ +++ LR + + V+IL+ H P+RI Sbjct: 79 LLTGGEPMLYP--HFKELYTRLREMGFILTLNTNGTLIDNEMVRILQIH------KPRRI 130 Query: 193 NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 N L +E + H + + A+ RL A I + Sbjct: 131 NVTLYGDSRETYGRL------CHNPQGYTLCMEALKRLKKADIDV 169 >gi|118582017|ref|YP_903267.1| radical SAM domain-containing protein [Pelobacter propionicus DSM 2379] gi|118504727|gb|ABL01210.1| Radical SAM domain protein [Pelobacter propionicus DSM 2379] Length = 357 Score = 39.3 bits (91), Expect = 0.95, Method: Composition-based stats. Identities = 27/164 (16%), Positives = 50/164 (30%), Gaps = 49/164 (29%) Query: 86 LKGIVHRYP--DRILLKL------LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY 137 GI RY +R+ + ++C C FC ++ VL+ + + Sbjct: 37 ADGIRRRYHPENRVTFVVDRNVNYTNICESRCSFCAFYRDAAAKDAYVLTPDEIFTKITE 96 Query: 138 IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197 + E ++ G +P L+ +++ + +R P V Sbjct: 97 LVELEGTQLLMQGGLNP-SLTIDYFEELFRE-----------IGTRFPSV---------- 134 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAI-------AAISRLANAG 234 H+ P E + A A+ RL AG Sbjct: 135 ------------QNHSLSPAEITCIARVSGLTIDTALERLHRAG 166 >gi|257439153|ref|ZP_05614908.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Faecalibacterium prausnitzii A2-165] gi|257198404|gb|EEU96688.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Faecalibacterium prausnitzii A2-165] Length = 409 Score = 39.3 bits (91), Expect = 0.97, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 18/119 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R +K+ C C +C G + + L + S EV+ + Sbjct: 119 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--AEDSILKELRQLAA-SGYREVVLSAIS 175 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L ++++ ++ ++ +R S +DP + PE I L K Sbjct: 176 LPSYGLDTGT----NLVELVEKCAQVEGIERIRLGS----LDPDMLTPEFITRLAAVEK 226 >gi|312112313|ref|YP_003990629.1| YfkB-like domain-containing protein [Geobacillus sp. Y4.1MC1] gi|311217414|gb|ADP76018.1| YfkB-like domain-containing protein [Geobacillus sp. Y4.1MC1] Length = 374 Score = 39.3 bits (91), Expect = 0.97, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 16/119 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +C + C C + ++ L + + ++E + + TGG+P +LS Sbjct: 35 FTTTTLCNMRCEHCAVGYTLQTKDPEALP---LDLLIKRLEEIPHLRSLSITGGEP-MLS 90 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215 K + + L H + +R ++N L L K P +H +H Sbjct: 91 LKSVDNYVVPLLKYAHERGVR----------TQLNSNLTLELDRYEKVIPYLDVLHISH 139 >gi|226334870|ref|YP_002784542.1| putative molybdenum cofactor biosynthesis protein [Rhodococcus opacus B4] gi|226246090|dbj|BAH56190.1| putative molybdenum cofactor biosynthesis protein [Rhodococcus opacus B4] Length = 305 Score = 39.3 bits (91), Expect = 0.97, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 7/113 (6%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R+ + L C + C +C G KG+ S A + + ++ +VI +GG+P Sbjct: 6 GRLRVFLTEQCNLACFYC---HNEGQPKGSAYLSDQLFDAAVSMSRQPEVEKVILSGGEP 62 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 L+ R+ ++++ + +V + ++ P L + V Sbjct: 63 LLHP--RVLELVEAVS--PNVARSSLITNGLLLTPSLARDLAFAGLSKIRLGV 111 >gi|311032494|ref|ZP_07710584.1| coproporphyrinogen III oxidase [Bacillus sp. m3-13] Length = 495 Score = 39.3 bits (91), Expect = 0.98, Method: Composition-based stats. Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 15/161 (9%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDT 131 I D + + + + + CP C +C F + ++G V S + Sbjct: 150 IVDRQLDVVPDLHDLGEEVSIYIGIPFCPTKCAYCTFPAYAINGKQGKVDSFLGGLHHEI 209 Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDP 189 +A A+++EK +I V + GG P ++ + + + + + ++ +R + V P Sbjct: 210 DAIGAWLKEKGIKITTVYYGGGTPTSITAEEMDMLYEQMYASFPDMEKVREVT-VEAGRP 268 Query: 190 QRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 I PE + LK+ + I P +++E + AI R Sbjct: 269 DTITPEKLDVLKKWNIDRISIN-----PQSYTQETLKAIGR 304 >gi|217967463|ref|YP_002352969.1| RNA modification enzyme, MiaB family [Dictyoglomus turgidum DSM 6724] gi|217336562|gb|ACK42355.1| RNA modification enzyme, MiaB family [Dictyoglomus turgidum DSM 6724] Length = 441 Score = 39.3 bits (91), Expect = 0.98, Method: Composition-based stats. Identities = 14/88 (15%), Positives = 33/88 (37%), Gaps = 11/88 (12%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GGDPLIL 157 C +C +C + G +K ++ + ++ + + + G D L Sbjct: 155 GCNNFCTYCIVPYLRGKEKSR--DPQEIIKEIEHLANQGVVEVTLLGQNVDSYGKD---L 209 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + L +L + I ++ +RF + P Sbjct: 210 GNVDLADLLVEIHKIPGIKRIRFLTSHP 237 >gi|212695675|ref|ZP_03303803.1| hypothetical protein ANHYDRO_00192 [Anaerococcus hydrogenalis DSM 7454] gi|212677348|gb|EEB36955.1| hypothetical protein ANHYDRO_00192 [Anaerococcus hydrogenalis DSM 7454] Length = 358 Score = 39.3 bits (91), Expect = 0.98, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 29/162 (17%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQIWEVIFTGGDP 154 + CP C FC + + + K ++ K + L+Y E+ F GG Sbjct: 10 IFIPFLGCPHDCAFCNQV-KITNYKDSINKENTIKQIDQYLSYFPNNDNPKEIAFFGG-S 67 Query: 155 LI-LSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 L + L+ K + +R +R P IN ++ LK+ V Sbjct: 68 FTGLETDVMISYLEIALAYKKKGIIDRIRLSTR-----PDYINNSILDILKKYEVDVIEL 122 Query: 209 -------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQ 240 ++AN H E ++I A + G L Q Sbjct: 123 GIQSLDNEILNANERGHSRE---DSIKASKLIKEYGFKLGHQ 161 >gi|329962041|ref|ZP_08300052.1| 23S rRNA m2A2503 methyltransferase [Bacteroides fluxus YIT 12057] gi|328530689|gb|EGF57547.1| 23S rRNA m2A2503 methyltransferase [Bacteroides fluxus YIT 12057] Length = 346 Score = 39.3 bits (91), Expect = 0.99, Method: Composition-based stats. Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 50/202 (24%) Query: 95 DRILLKLLHV--CPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG 151 DR L + C + C+FC M G Q T L++ ++ + E+ ++ V+ G Sbjct: 100 DRATLCVSSQVGCKMNCKFC----MTGKQGFTANLTANQIINQISSLPERDKLTNVVMMG 155 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEA 203 G+PL L +VLK L + S P+RI L + ++E+ Sbjct: 156 MGEPL----DNLDEVLKALEIMT-------ASYGYSWSPKRITLSSVGLRKGLQRFIEES 204 Query: 204 GKPVYIAIHANHP---YEFSEEAIA-AISRLANAGIILLS-----Q-------SVLLKGI 247 + +++H P E A +I+ + +L + Q V KG+ Sbjct: 205 DCHLAVSLHTPVPLQRRELMPAEKAFSITEIVE---LLRNYDFSKQRRLSFEYIVF-KGV 260 Query: 248 NDD---PEILANLMRTFVELRI 266 ND + L L+R + RI Sbjct: 261 NDSLLYAKELLKLLRGL-DCRI 281 >gi|303239989|ref|ZP_07326511.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2] gi|302592468|gb|EFL62194.1| Radical SAM domain protein [Acetivibrio cellulolyticus CD2] Length = 393 Score = 39.3 bits (91), Expect = 0.99, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 8/81 (9%) Query: 94 PDRILLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 P+ + LKL + C + C+ CF+ L D + + E +I + Sbjct: 42 PESVGLKLTNRCNLRCKHCFQWNESGYHRFMDHDCQSLDM-DIDLFNKILVETQEIKSRL 100 Query: 149 -FTGGDPLILSH-KRLQKVLK 167 GG+PL S R+ +L+ Sbjct: 101 YLWGGEPLYHSDFDRIAGLLE 121 >gi|269127512|ref|YP_003300882.1| MiaB-like tRNA modifying enzyme YliG [Thermomonospora curvata DSM 43183] gi|268312470|gb|ACY98844.1| MiaB-like tRNA modifying enzyme YliG [Thermomonospora curvata DSM 43183] Length = 484 Score = 39.3 bits (91), Expect = 0.99, Method: Composition-based stats. Identities = 34/145 (23%), Positives = 49/145 (33%), Gaps = 32/145 (22%) Query: 99 LKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT---- 150 LKL C C FC FR V VL+ A + + EV+ Sbjct: 179 LKLASGCDRRCTFCAIPAFRGAYVSRDPQEVLAEAAWLA-------ERGVREVVLVSENS 231 Query: 151 ---GGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVD-PQRINPELIQCL-KEAG 204 G D L + L+K+L L I ++ +R P + P LI+ L G Sbjct: 232 TSYGKD---LGDLRALEKLLPQLAAIDGIERVR-----LSYLQPAELRPGLIEVLCTTPG 283 Query: 205 KPVYIAIHANHPYEFSEEAIAAISR 229 Y + H S + + R Sbjct: 284 VAPYFDLSFQHA---SGPVLRRMRR 305 >gi|229918072|ref|YP_002886718.1| pyruvate formate-lyase activating enzyme [Exiguobacterium sp. AT1b] gi|229469501|gb|ACQ71273.1| pyruvate formate-lyase activating enzyme [Exiguobacterium sp. AT1b] Length = 238 Score = 39.3 bits (91), Expect = 0.99, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 58/141 (41%), Gaps = 23/141 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAY---IQEKSQIWEVIF 149 P + L C + C +C + +K S++D + AL+Y ++ + Sbjct: 18 PGIRFIVFLQGCALRCLYCHNADTWDFKKNNHRSAEDVIQEALSYRPFMEASKG--GITI 75 Query: 150 TGGDPLILSHKRLQKVLKTLRYI--------------KHVQILRFHSRVPIVDPQRINPE 195 +GGDPL + L+ +L+ + ++ + H+ + ++D + I+ + Sbjct: 76 SGGDPL-AQPEFLEALLREAKKHGLHTTLDTSGALRPPNLDAILDHTDLVLLDIKHIDDD 134 Query: 196 LIQCL--KEAGKPVYIAIHAN 214 + + L + + +A H + Sbjct: 135 MCKKLTGRSNANTLALAEHLS 155 >gi|188582019|ref|YP_001925464.1| molybdenum cofactor biosynthesis protein A [Methylobacterium populi BJ001] gi|179345517|gb|ACB80929.1| molybdenum cofactor biosynthesis protein A [Methylobacterium populi BJ001] Length = 344 Score = 39.3 bits (91), Expect = 0.99, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 33/170 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C +M K +L+ ++ + + ++ TGG+PL+ Sbjct: 30 ISVTDRCDFRCAYCMAEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRR 88 Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 +RL + LK+ + + + S++ R PEL L V + Sbjct: 89 DIMHLFRRLSRHLKS-GALDELTLTTNGSQL-----ARFAPELAD-LGVRRINVSLDT-- 139 Query: 214 NHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKGINDD 250 E AI+R +AGI + +V LKG+N+D Sbjct: 140 -----LDAEKFRAITRRGDLSVVLAGIEAARSAGIKVKINAVALKGVNED 184 >gi|284045650|ref|YP_003395990.1| molybdenum cofactor biosynthesis protein A [Conexibacter woesei DSM 14684] gi|283949871|gb|ADB52615.1| molybdenum cofactor biosynthesis protein A [Conexibacter woesei DSM 14684] Length = 330 Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 14/87 (16%), Positives = 38/87 (43%), Gaps = 4/87 (4%) Query: 97 ILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + + C C++C + + ++ +L+ ++ + + + +V TGG+PL Sbjct: 16 VRISVTDRCNFRCQYCMPADGLPWLEREEILTFEEIARLVGLLASM-GVHDVRLTGGEPL 74 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHS 182 + ++++ L I V L + Sbjct: 75 VRRD--FPRLVEMLAAIPAVHDLSITT 99 >gi|262383650|ref|ZP_06076786.1| radical SAM superfamily protein [Bacteroides sp. 2_1_33B] gi|262294548|gb|EEY82480.1| radical SAM superfamily protein [Bacteroides sp. 2_1_33B] Length = 416 Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 31/84 (36%), Gaps = 11/84 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-----SQIWEVIFTGGD 153 + C + C++C+ +VG +S + A+ YI E + F GG+ Sbjct: 25 FIVTKDCQLACKYCY---LVGKNTNERMSWEIARKAIDYILEHENDMPEESVTWDFIGGE 81 Query: 154 PLI---LSHKRLQKVLKTLRYIKH 174 P + L + + + H Sbjct: 82 PFLEIDLIDRICDYIKTEMYRRNH 105 >gi|224025812|ref|ZP_03644178.1| hypothetical protein BACCOPRO_02554 [Bacteroides coprophilus DSM 18228] gi|224019048|gb|EEF77046.1| hypothetical protein BACCOPRO_02554 [Bacteroides coprophilus DSM 18228] Length = 163 Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 22/59 (37%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C C C E Q G L+ + E + I + + F+GGDP + L Sbjct: 26 GCHHRCPGCHNPESWNPQAGKPLTPEVLEDIIQSINSNPLLDGITFSGGDPFFNPKEFL 84 >gi|212691074|ref|ZP_03299202.1| hypothetical protein BACDOR_00564 [Bacteroides dorei DSM 17855] gi|237712425|ref|ZP_04542906.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|237726616|ref|ZP_04557097.1| conserved hypothetical protein [Bacteroides sp. D4] gi|265752128|ref|ZP_06087921.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 3_1_33FAA] gi|212666306|gb|EEB26878.1| hypothetical protein BACDOR_00564 [Bacteroides dorei DSM 17855] gi|229435142|gb|EEO45219.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4] gi|229453746|gb|EEO59467.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|263236920|gb|EEZ22390.1| MiaB-like tRNA modifying enzyme [Bacteroides sp. 3_1_33FAA] Length = 438 Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C + + E A E++ TG Sbjct: 148 RTRYFLKVQDGCDYFCSYCTI-PFARGRSRNGRIEEIVEQARQ--AAAEGGKEIVITGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L + ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKTTGESFFDLVKALDQVAGIERYRISS----IEPNLLTDEIIEYVSRSR---AFM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|170693394|ref|ZP_02884553.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia graminis C4D1M] gi|170141549|gb|EDT09718.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia graminis C4D1M] Length = 461 Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 46/138 (33%), Gaps = 26/138 (18%) Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143 H P R+ + ++ C YC +C V S+ + L I Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192 Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 + EV G + L + + +++ + I ++ +R+ + P+ Sbjct: 193 VREVTLLGQNVNAYRGALTVGSSEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248 Query: 195 ELIQCLKEAGKPVYIAIH 212 LI + K + +H Sbjct: 249 RLIDTYAKVPK-LVSHLH 265 >gi|188585813|ref|YP_001917358.1| RNA modification enzyme, MiaB family [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350500|gb|ACB84770.1| RNA modification enzyme, MiaB family [Natranaerobius thermophilus JW/NM-WN-LF] Length = 446 Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 28/144 (19%), Positives = 56/144 (38%), Gaps = 17/144 (11%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 P G+ + +K R LK+ C +C +C + L S+ E ++ Sbjct: 137 PKGEFENLKIKNFKKHDRTRHFLKIQEGCDQFCSYC-----IIPYARGHLRSRPPEDVIS 191 Query: 137 YIQE--KSQIWEVIFTGGD--PLILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDP 189 I++ + E++ TG + + L + L I H++ +R S +P Sbjct: 192 EIKQAVSNGFKEIVLTGINLGAYGRENSNLPNLATLLDKIIHLKGDYRIRLSS----CEP 247 Query: 190 QRINPELIQCLKEAGKPVYIAIHA 213 Q I L++ + + K + +H Sbjct: 248 QEITIGLLELVTNSEK-ICKHLHI 270 >gi|150002616|ref|YP_001297360.1| putative Fe-S oxidoreductase [Bacteroides vulgatus ATCC 8482] gi|254881421|ref|ZP_05254131.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294777900|ref|ZP_06743343.1| MiaB-like protein [Bacteroides vulgatus PC510] gi|319642808|ref|ZP_07997446.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_40A] gi|149931040|gb|ABR37738.1| putative Fe-S oxidoreductase [Bacteroides vulgatus ATCC 8482] gi|254834214|gb|EET14523.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|294448253|gb|EFG16810.1| MiaB-like protein [Bacteroides vulgatus PC510] gi|317385552|gb|EFV66493.1| Fe-S oxidoreductase [Bacteroides sp. 3_1_40A] Length = 438 Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 42/123 (34%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C + + E A E++ TG Sbjct: 148 RTRYFLKVQDGCDYFCSYCTI-PFARGRSRNGRIEEIVEQARQ--AAAEGGKEIVITGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L + ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKTTGESFFDLVKALDQVAGIERYRISS----IEPNLLTDEIIEYVSRSR---AFM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|34499604|ref|NP_903819.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Chromobacterium violaceum ATCC 12472] gi|81654199|sp|Q7NQI8|MIAB_CHRVO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|34105455|gb|AAQ61810.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 444 Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 21/107 (19%), Positives = 38/107 (35%), Gaps = 14/107 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154 + ++ C YC FC V S+ E L I + E+ G + Sbjct: 148 AFVSIMEGCSKYCSFC-----VVPYTRGEEVSRPFEDVLTEIAGLAAQGVKEITLLGQNV 202 Query: 155 ----LILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 ++S + +L+ + + V+ +RF + P QRI Sbjct: 203 NAYRGLMSDGEIADFALLLEYVHEVPGVERIRFTTSHPREFSQRIID 249 >gi|152979335|ref|YP_001344964.1| molybdenum cofactor biosynthesis protein A [Actinobacillus succinogenes 130Z] gi|171704353|sp|A6VPY2|MOAA_ACTSZ RecName: Full=Molybdenum cofactor biosynthesis protein A gi|150841058|gb|ABR75029.1| molybdenum cofactor biosynthesis protein A [Actinobacillus succinogenes 130Z] Length = 336 Score = 39.3 bits (91), Expect = 1.00, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 60/162 (37%), Gaps = 22/162 (13%) Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + VC C +C ++ L+ + A++ +V TGG+P L Sbjct: 26 LSITDVCNFRCNYCLPDGYHPSHERDKFLTVDEIRRAVSAFAAMGA-QKVRITGGEP-TL 83 Query: 158 SHKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 LQ + + L I+HV + R+ ++ + + +++ + Sbjct: 84 RKDFLQITENITALDGIRHV--------ALTTNGYRMAQDVGAWKQAGISSINVSVDSLD 135 Query: 216 PY---EFS-----EEAIAAISRLANAGII-LLSQSVLLKGIN 248 P + + E + I R AG + SVL+K +N Sbjct: 136 PRMFYQITGENKFTEVMRGIDRAFEAGYRKIKVNSVLMKDLN 177 >gi|331085298|ref|ZP_08334384.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae bacterium 9_1_43BFAA] gi|330408081|gb|EGG87571.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae bacterium 9_1_43BFAA] Length = 440 Score = 39.3 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 10/113 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 LK+ C +C +C ++ G+ + + + + E+ ++ L Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFR--SVPMEQLVREAEELAEQGVKELILVAQETTLY 203 Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 K L K+LK L I ++ +R V P+ I ELIQ +KE K Sbjct: 204 GKDLYGEKSLHKLLKELCKIAGIRWIR----VLYCYPEEITDELIQVMKEESK 252 >gi|284990944|ref|YP_003409498.1| coenzyme PQQ biosynthesis protein E [Geodermatophilus obscurus DSM 43160] gi|284064189|gb|ADB75127.1| coenzyme PQQ biosynthesis protein E [Geodermatophilus obscurus DSM 43160] Length = 370 Score = 39.3 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 85/229 (37%), Gaps = 26/229 (11%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L +L + CP++C +C + + L++ + + L + ++ +GG+PL+ Sbjct: 12 LLAELTYGCPLHCSYCS-NPIDLAAHTDELTTAEWQRVLVE-ARDLGVLQLHLSGGEPLL 69 Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 + + L ++ + + P+R L L V I++ A+ Sbjct: 70 RRDLPEIVRCAGELGLYTNLI-----TSALGLTPRRAEELLAAGLD----HVQISLQADE 120 Query: 216 P---------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 F + +AA + G L VL + D + +L RI Sbjct: 121 AALSDRLAGVRSFERKLVAA-RLVKELGWPLTLNVVLHRHNVDRVASILDLAEQLGADRI 179 Query: 267 K----PYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 + YY G R +E Q +V + +E++ G + Y+L Sbjct: 180 ELAHTQYYGWALRNRDGLLPSRAQLERAQDVVRAARERLQGRMEVIYVL 228 >gi|284050769|ref|ZP_06380979.1| molybdenum cofactor biosynthesis protein A [Arthrospira platensis str. Paraca] gi|291572046|dbj|BAI94318.1| hypothetical protein [Arthrospira platensis NIES-39] Length = 420 Score = 39.3 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 3/71 (4%) Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L ++ C YC +CF EM S K TVL+ + E + +I + + GG+P + Sbjct: 3 LIVIDKCSNYCAYCFASTEMGKSGKKTVLTREGIERVVQFISRSGPNFRLNIIGGEPFLY 62 Query: 158 SHKRLQKVLKT 168 L +L+ Sbjct: 63 KD--LVYLLEK 71 >gi|300024258|ref|YP_003756869.1| molybdenum cofactor biosynthesis protein A [Hyphomicrobium denitrificans ATCC 51888] gi|299526079|gb|ADJ24548.1| molybdenum cofactor biosynthesis protein A [Hyphomicrobium denitrificans ATCC 51888] Length = 349 Score = 39.3 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 59/174 (33%), Gaps = 41/174 (23%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +LS ++ + + + + ++ TGG+PL+ Sbjct: 34 VSVTDRCDFRCVYCMSEHMTFLPKRDLLSLEELDVLCSAFVRR-GVKKLRITGGEPLV-- 90 Query: 159 HKRLQKVLKTLRYIKHVQI-----LRFHS-----------------RVPIVDPQRINPEL 196 K + + + L H++ L + V I+P+ Sbjct: 91 RKNIMWLFEALGR--HLESGDLKELTLTTNGSQLEKYAGELKAAGVERINVSIDTIDPDK 148 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + G + + AGI + +V LKG+N+D Sbjct: 149 FKAITRWGNLATVM--------------RGLDAAEKAGIKIKINAVALKGVNED 188 >gi|284047809|ref|YP_003398148.1| hypothetical protein Acfer_0430 [Acidaminococcus fermentans DSM 20731] gi|283952030|gb|ADB46833.1| hypothetical protein Acfer_0430 [Acidaminococcus fermentans DSM 20731] Length = 326 Score = 39.3 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 33/143 (23%), Positives = 63/143 (44%), Gaps = 15/143 (10%) Query: 84 SPLKGIVHRYPDR-----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 + ++ VH Y R + + + + C +C FC +E G S + ++ + Sbjct: 7 TAVEAAVHPYKTRSGGATVTVFVPYDCRNHCPFCVNKEEYADMTG--FSLEAICQSIRKM 64 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 + + +FTGG+PL + K LQ +L + V ++ +P+ ++ E++ Sbjct: 65 DALTPYCDFVFTGGEPL-ANLKSLQAMLDQVSDTHKVY---INTTLPVSR-EQSEEEVLA 119 Query: 199 CLKE-AGKPVYIAI--HANHPYE 218 LK+ AGK + I H H E Sbjct: 120 FLKKNAGKITCLNISRHMQHYVE 142 >gi|167561620|ref|ZP_02354536.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia oklahomensis EO147] gi|167568856|ref|ZP_02361730.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia oklahomensis C6786] Length = 457 Score = 39.3 bits (91), Expect = 1.0, Method: Composition-based stats. Identities = 21/138 (15%), Positives = 45/138 (32%), Gaps = 26/138 (18%) Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143 H P R+ + ++ C YC +C V S+ + L I Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQG 192 Query: 144 IWEVIFTGGD------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 + EV G + L + +++ + I ++ +R+ + P+ Sbjct: 193 VREVTLLGQNVNAYRGALTAGASDIADFATLIEYVADIPGIERIRYTTSH----PKEFTQ 248 Query: 195 ELIQCLKEAGKPVYIAIH 212 L+ + K + +H Sbjct: 249 RLLDVYAKVPK-LVDHLH 265 >gi|330797004|ref|XP_003286553.1| hypothetical protein DICPUDRAFT_31087 [Dictyostelium purpureum] gi|325083458|gb|EGC36910.1| hypothetical protein DICPUDRAFT_31087 [Dictyostelium purpureum] Length = 395 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 46/92 (50%), Gaps = 4/92 (4%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R+ + + L+ C + C +C E + Q+ +L++++ + + ++ FT Sbjct: 76 RHHTYLRISLIDTCNLKCLYCHPEEGFIKQQQDKLLTAEEIIRLSKLFVS-AGVNKIRFT 134 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 GG+PL+ K + K+++ + IK ++ + + Sbjct: 135 GGEPLV--RKEIDKIIEEVGKIKGIEKIGITT 164 >gi|282865955|ref|ZP_06275004.1| Radical SAM domain protein [Streptomyces sp. ACTE] gi|282559279|gb|EFB64832.1| Radical SAM domain protein [Streptomyces sp. ACTE] Length = 364 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 30/152 (19%), Positives = 57/152 (37%), Gaps = 27/152 (17%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE---VIFTGGD 153 +LL L CP+ C C TV + D + ++ + V+ TGG+ Sbjct: 17 LLLGLTRRCPLSCAHCS-----TGSDPTVREAPDAGRLVRFVGSFTSENRPDVVMLTGGE 71 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQR---INPELIQCLKEAGK-P 206 PL+L +++ L + R SR + + R I +++ + Sbjct: 72 PLLLP-----GLVEELSALAR----RAGSRTALLSGMFFARSRHIPAPILRAITGVDHFS 122 Query: 207 VYIAIHANHPYEF-SEEAIAAISRLANAGIIL 237 + +H H E + A+ R+ AG+ + Sbjct: 123 ASLDVH--HEREVGRADVFRALHRIREAGVAV 152 >gi|114617057|ref|XP_519489.2| PREDICTED: leucine zipper protein 5 isoform 10 [Pan troglodytes] gi|114617059|ref|XP_001150332.1| PREDICTED: leucine zipper protein 5 isoform 7 [Pan troglodytes] gi|114617061|ref|XP_001150466.1| PREDICTED: leucine zipper protein 5 isoform 9 [Pan troglodytes] gi|114617063|ref|XP_001150190.1| PREDICTED: leucine zipper protein 5 isoform 6 [Pan troglodytes] Length = 1143 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%) Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173 + V + + + Y+ + E + + K+L +LK L Sbjct: 744 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 797 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 ++ L + P P+ + L+ G ++IH H F E +S L + Sbjct: 798 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSMLEDT 850 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288 G L S+ +L I D E L R + +I YL G F++ ++ Sbjct: 851 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 907 Query: 289 EGQKIVASLKE 299 I+ ++K Sbjct: 908 RSLGIMQTVKG 918 >gi|114617075|ref|XP_001150126.1| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes] Length = 1156 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%) Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173 + V + + + Y+ + E + + K+L +LK L Sbjct: 744 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 797 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 ++ L + P P+ + L+ G ++IH H F E +S L + Sbjct: 798 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSMLEDT 850 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288 G L S+ +L I D E L R + +I YL G F++ ++ Sbjct: 851 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 907 Query: 289 EGQKIVASLKE 299 I+ ++K Sbjct: 908 RSLGIMQTVKG 918 >gi|167643994|ref|YP_001681657.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Caulobacter sp. K31] gi|229890472|sp|B0T155|MIAB_CAUSK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|167346424|gb|ABZ69159.1| RNA modification enzyme, MiaB family [Caulobacter sp. K31] Length = 450 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 18/121 (14%), Positives = 40/121 (33%), Gaps = 15/121 (12%) Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + +E+ D + + G+ L + C +C FC G + Sbjct: 136 DFAADEKFDALPAERQ--VSGVS------AFLTVQEGCDKFCTFCVVPYTRGGE--WSRP 185 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK---RLQKVLKTLRYIKHVQILRFHSRV 184 + E + + EV G + + L ++++ L I + +R+ + Sbjct: 186 PEQIEDEARRL-ADQGVREVTLLGQN-VNAYDGGGYTLARLVRRLAKIPGLDRIRYTTSH 243 Query: 185 P 185 P Sbjct: 244 P 244 >gi|170720721|ref|YP_001748409.1| molybdenum cofactor synthesis domain-containing protein [Pseudomonas putida W619] gi|169758724|gb|ACA72040.1| molybdenum cofactor synthesis domain protein [Pseudomonas putida W619] Length = 322 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 7/86 (8%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C +C + +V +Q LS++ +AY+ E + I + TGG+PL+ Sbjct: 15 VSLTAACNYACSYCVPNGKRLVAAQDE--LSAEALARGVAYLIEAAGIERLRITGGEPLV 72 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHS 182 RL L + ++ +Q + + Sbjct: 73 SP--RLNAFLAAVAKLE-LQDITLTT 95 >gi|91776646|ref|YP_546402.1| molybdenum cofactor synthesis-like protein [Methylobacillus flagellatus KT] gi|91710633|gb|ABE50561.1| GTP cyclohydrolase subunit MoaA [Methylobacillus flagellatus KT] Length = 343 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 40/198 (20%), Positives = 83/198 (41%), Gaps = 26/198 (13%) Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 +P P+ + ++P ++ ++ R+ L + C C +C +MV + VL Sbjct: 1 MPGLNSRPMPSSAYTPE--LIDQFGRRVDYIRLSITDRCDFRCVYCMGDDMVFLPREDVL 58 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK-RLQKVLKTLRYIKHVQILRFHSRVP 185 S ++ + + +V TGG+PL+ + L + + L ++ + + S++ Sbjct: 59 SLEECARLVRTF-VTLGVSKVRITGGEPLVRKNALTLFQEVGRLPGLRELTMTTNGSQL- 116 Query: 186 IVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAI--------AAISRLANAGII 236 +R + LK+AG + I++ + P F + I +AG Sbjct: 117 ----ERYAHD----LKKAGLSRINISMDSLDPERFRKITRVGDLDKVLRGIQAAKDAGFT 168 Query: 237 -LLSQSVLLKGINDDPEI 253 + +VL++GIND I Sbjct: 169 HIKLNTVLMRGINDTEAI 186 >gi|150016055|ref|YP_001308309.1| radical SAM domain-containing protein [Clostridium beijerinckii NCIMB 8052] gi|149902520|gb|ABR33353.1| Radical SAM domain protein [Clostridium beijerinckii NCIMB 8052] Length = 343 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 11/117 (9%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFTGGDP 154 + CP C FC + + G V +S Y I+ K+ E+ F GG Sbjct: 10 IFVPHEGCPHNCVFCNQDRITGVDDEEVTASSVITTINDYLETIKNKNATIEISFFGGTF 69 Query: 155 LILSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + ++ +++LK + K + +R +R P IN ++ LKE G + Sbjct: 70 TGIREEKQRELLKVAKEFKEKGLIDKIRLSTR-----PDYINDYILTYLKEYGVDII 121 >gi|150391787|ref|YP_001321836.1| molybdenum cofactor biosynthesis protein A [Alkaliphilus metalliredigens QYMF] gi|167011809|sp|A6TVF9|MOAA_ALKMQ RecName: Full=Molybdenum cofactor biosynthesis protein A gi|149951649|gb|ABR50177.1| molybdenum cofactor biosynthesis protein A [Alkaliphilus metalliredigens QYMF] Length = 320 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 41/81 (50%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + +C + C++C + + +L+ ++ E + I ++ I +V TGG+PL+ Sbjct: 14 ISITDLCNLRCQYCMPEKGIYKKTHQDILTLEEIEQIVR-IGAENGINKVRITGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQIL 178 K + ++K + I +Q + Sbjct: 72 -RKGVIGLIKNISNIPGIQDI 91 >gi|294496381|ref|YP_003542874.1| radical SAM protein [Methanohalophilus mahii DSM 5219] gi|292667380|gb|ADE37229.1| Radical SAM domain protein [Methanohalophilus mahii DSM 5219] Length = 396 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 25/155 (16%) Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYIQ 139 N + R P+ + ++ C C C G ++ T K + AL Sbjct: 84 NAEVQHALGRRVPETVSFEITRQCKCNCDHCIIS---GGEEDIDTETVKKTIDDALD--- 137 Query: 140 EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQ 198 + +IFT GDPL+ + + + Y+ + + V + P +NP+ + Sbjct: 138 --MGAFIIIFTEGDPLLRED-----IFELIDYVDKERAI-----VNMYTPGTDMNPQTAR 185 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 LK+AG + + E A+ RL A Sbjct: 186 KLKQAGLHNLLVSIYST----DPEKHNAVRRLEGA 216 >gi|291532427|emb|CBL05540.1| Radical SAM superfamily [Megamonas hypermegale ART12/1] Length = 130 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 + C ++C C+R G + L++++ + L I + + +IF+GG+PL+ Sbjct: 7 TTNACNMFCDHCYRDA--GCKADEELNTQEAKTLLEQIAK-AGFKIMIFSGGEPLMRPD 62 >gi|300023006|ref|YP_003755617.1| coenzyme PQQ biosynthesis protein E [Hyphomicrobium denitrificans ATCC 51888] gi|299524827|gb|ADJ23296.1| coenzyme PQQ biosynthesis protein E [Hyphomicrobium denitrificans ATCC 51888] Length = 386 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 44/279 (15%), Positives = 99/279 (35%), Gaps = 51/279 (18%) Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGT 124 E+ L + DP+ + G+ L +L H CP+ C +C + + T Sbjct: 2 NEIAPLEQFSPDPVAEVCARAPVGL--------LAELTHRCPLQCPYCS-NPLELDRVNT 52 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 L++ + + + + I ++ +GG+P + L+ ++ ++ Sbjct: 53 ELTTAEWQDVMRQ-AAELGILQIHLSGGEPTLRKD--LEDIVDVAAKAG------LYT-N 102 Query: 185 PIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR-------------- 229 I + + ++ L++ G V ++I + + +S Sbjct: 103 LITAGVTLTEDRLKKLQDLGLDHVQLSI-----QDVDDANAERMSAYKGGLAKKREVGKW 157 Query: 230 LANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI-------KPYYLHHPDLAAGTSH 282 + G+ L + + + + E L N++ VE+ YY A Sbjct: 158 VRKLGMPLTINAPIHRF---NIENLPNIIDFAVEMGAGRIEVANIQYYAWALKNRASLMP 214 Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVK 321 R + + +IV KE++ G+ +++ P Y K Sbjct: 215 TRAQVIKSAEIVEEAKERLKGILVFDFVV--PDYYAKTP 251 >gi|239815326|ref|YP_002944236.1| molybdenum cofactor biosynthesis protein A [Variovorax paradoxus S110] gi|239801903|gb|ACS18970.1| molybdenum cofactor biosynthesis protein A [Variovorax paradoxus S110] Length = 383 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F ++ +LS ++ + ++ TGG+ Sbjct: 47 ISVTDRCNFRCSYCMPKDVFDKDYQYLPHSALLSFEEMTRLARLFAAH-GVRKIRLTGGE 105 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K ++ ++ L I Sbjct: 106 PLL--RKNIEALIAQLSEI 122 >gi|254446032|ref|ZP_05059508.1| RNA modification enzyme, MiaB family [Verrucomicrobiae bacterium DG1235] gi|198260340|gb|EDY84648.1| RNA modification enzyme, MiaB family [Verrucomicrobiae bacterium DG1235] Length = 427 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 40/121 (33%), Gaps = 9/121 (7%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R LK+ C C FC E A + + I E++ TG + Sbjct: 129 QRANLKIQDGCSFVCSFCII-PFARGAARAREMGNLLEEARQ--KAEQGIREIVITGVNI 185 Query: 155 LILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K L KVL+ L ++ + +R S P P EL + + + H Sbjct: 186 GTYDTKGGGLLKVLEGLNAVEGIDRIRISSIEPTTIP----TELFGLMNDPQHALLPFFH 241 Query: 213 A 213 Sbjct: 242 I 242 >gi|166030899|ref|ZP_02233728.1| hypothetical protein DORFOR_00579 [Dorea formicigenerans ATCC 27755] gi|166029166|gb|EDR47923.1| hypothetical protein DORFOR_00579 [Dorea formicigenerans ATCC 27755] Length = 440 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 16/116 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT------ 150 +K+ C +C +C ++ G+ + +V K A + E+I Sbjct: 146 AYMKIAEGCDKHCTYCIIPKLRGNYR-SVPMEKLLAEAKD--LADQGVKELILVAQETTV 202 Query: 151 -GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + K L K+L+ L I +Q +R P+ I ELIQ +KE K Sbjct: 203 YGKD--LYGEKSLHKLLRELCKISGIQWIRI----LYCYPEEIYDELIQTIKEENK 252 >gi|317181628|dbj|BAJ59412.1| hypothetical protein HPF57_0338 [Helicobacter pylori F57] Length = 418 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C V + + K E + + EV+ TG + Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCSKGVQEVVLTGTN 189 Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 R + +++K L I ++ +R S Sbjct: 190 VGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|256828468|ref|YP_003157196.1| Radical SAM domain-containing protein [Desulfomicrobium baculatum DSM 4028] gi|256577644|gb|ACU88780.1| Radical SAM domain protein [Desulfomicrobium baculatum DSM 4028] Length = 292 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 7/77 (9%) Query: 97 ILLKLLHVCPVY-CRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 +L+++ CP C FC +R +S + AA + + + GD Sbjct: 17 VLIRVADGCPHNSCAFCAMYRGIPYRVHDQETISRRVALAA----AQHPEARRIFLADGD 72 Query: 154 PLILSHKRLQKVLKTLR 170 L L + L+ +L R Sbjct: 73 ALALPAQLLEMILTQAR 89 >gi|145299699|ref|YP_001142540.1| molybdenum cofactor biosynthesis protein A [Aeromonas salmonicida subsp. salmonicida A449] gi|142852471|gb|ABO90792.1| molybdenum cofactor biosynthesis enzyme A [Aeromonas salmonicida subsp. salmonicida A449] Length = 366 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 57/161 (35%), Gaps = 17/161 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + VC C +C + + LS + ++ +V TGG+P + Sbjct: 57 LSVTDVCNFRCTYCLPDGYRPEGRKSFLSLDEIRRIVSGFAAMGT-RKVRLTGGEPSLRR 115 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 +++T+ ++ + + R+ + + +++ + P + Sbjct: 116 D--FTAIIETVANTPGIEKV-----AMTTNGYRLKERAREWFDAGLTALNVSVDSLDPRQ 168 Query: 219 FS--------EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 F E + I AG + +VLLKG+ND Sbjct: 169 FHQITGENKLAEVMDGIEAALAAGFKSVKINAVLLKGLNDH 209 >gi|158521512|ref|YP_001529382.1| radical SAM domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158510338|gb|ABW67305.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3] Length = 341 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 25/160 (15%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPL 155 + CP C FC + + G + L Y + ++ F GG+ L Sbjct: 12 VFLPHAGCPHRCVFCDQDAITGQKASLTADDLHDHVHRYLQYRGDNRGHAQIAFYGGNFL 71 Query: 156 ILSHKRLQKVLKTLRY-IKH--VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-- 210 L + L ++L + VQ +RF +R P I + + LK+ Sbjct: 72 GLERESLTQMLHAASAFVDQGLVQAIRFSTR-----PDTITQKNLDLLKDYPVTTVEVGV 126 Query: 211 ----------IHANHPYEFSEEAIAAISRLANAGIILLSQ 240 H E ++ AA+ L AG +Q Sbjct: 127 QSMDDRVLEKARRGHTAE---QSTAALLLLKQAGYETGAQ 163 >gi|15898384|ref|NP_342989.1| Heme biosynthesis related protein [Sulfolobus solfataricus P2] gi|284174114|ref|ZP_06388083.1| Heme biosynthesis related protein [Sulfolobus solfataricus 98/2] gi|13814795|gb|AAK41779.1| Heme biosynthesis related protein [Sulfolobus solfataricus P2] gi|261602951|gb|ACX92554.1| Radical SAM domain protein [Sulfolobus solfataricus 98/2] Length = 394 Score = 38.9 bits (90), Expect = 1.0, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 57/120 (47%), Gaps = 8/120 (6%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 + + +P+ L + EE ++ ++ + + L L + C C +CF++ Sbjct: 33 LRKGVVPEH--LKDIIEEGFSATDEDLDEEIEKFLRKPVLEPTLVLTYNCNFDCIYCFQK 90 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRYIK 173 G +K +S K T + YI++ + +V T GG+P IL ++++++ + L +K Sbjct: 91 ---GFRKNISVSDKVTRGFVNYIRKNEKGRKVRVTYFGGEP-ILQLRKIEEISRELSDLK 146 >gi|329928802|ref|ZP_08282641.1| menaquinone biosynthesis protein, SCO4550 family [Paenibacillus sp. HGF5] gi|328937445|gb|EGG33866.1| menaquinone biosynthesis protein, SCO4550 family [Paenibacillus sp. HGF5] Length = 377 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 33/77 (42%), Gaps = 9/77 (11%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--EVIFTGG---D-PL 155 ++C V+CRFC GS +G VLS E IQE + E++ GG D P Sbjct: 62 TNICDVFCRFCAFYRRPGSSEGYVLSD---ETIFQKIQETEDVNGTEILMQGGVNPDLPF 118 Query: 156 ILSHKRLQKVLKTLRYI 172 L+ + K I Sbjct: 119 NYYTDLLRNIKKRFPSI 135 >gi|312622876|ref|YP_004024489.1| molybdenum cofactor biosynthesis protein a [Caldicellulosiruptor kronotskyensis 2002] gi|312203343|gb|ADQ46670.1| molybdenum cofactor biosynthesis protein A [Caldicellulosiruptor kronotskyensis 2002] Length = 314 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R D + L + C +C +C +++ + LS ++ ++ ++ I ++ T Sbjct: 12 SRKIDYLRLSVTDRCNFFCMYCRTKDLYYERIDQ-LSKEEIFRIISAFKK-LGIQKLRIT 69 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P + + ++++ I ++ + + ++ + +K K V I+ Sbjct: 70 GGEPFLRDD--IVEIIEFAHSIG-IENINITT---NGW--LDTEKIKKIIKSPLKSVNIS 121 Query: 211 IHA---NHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGIN 248 + + + + AI L + ++ +VL++ +N Sbjct: 122 LDTLDKEKYRSVTGIDGLDKVLTAIDELREHKRVKIN-TVLIRSVN 166 >gi|254719054|ref|ZP_05180865.1| molybdenum cofactor biosynthesis protein A [Brucella sp. 83/13] gi|265984046|ref|ZP_06096781.1| molybdenum cofactor biosynthesis protein A [Brucella sp. 83/13] gi|306838976|ref|ZP_07471798.1| molybdenum cofactor biosynthesis protein A [Brucella sp. NF 2653] gi|264662638|gb|EEZ32899.1| molybdenum cofactor biosynthesis protein A [Brucella sp. 83/13] gi|306405943|gb|EFM62200.1| molybdenum cofactor biosynthesis protein A [Brucella sp. NF 2653] Length = 344 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 58/173 (33%), Gaps = 41/173 (23%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLRYIKHVQ---------------ILRF-------HSRVPIVDPQRINPEL 196 K + ++ L H++ + RF R V +NPE Sbjct: 86 RKNIMHLIGNLSR--HLKSGALDELTLTTNGSQLARFAGELADCGVRRINVSLDTLNPEK 143 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 + + G + I AGI + +V LK ND Sbjct: 144 FRTITRWGD--------------LPRVLEGIDAARKAGIHVKINAVALKDFND 182 >gi|121551156|gb|ABM55768.1| MiaB [Pasteuria ramosa] Length = 361 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 70/202 (34%), Gaps = 34/202 (16%) Query: 22 KEQIDEIKEISNHYSIALTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDN 81 ++ +K I Y P + L HN I R +P E +E + Sbjct: 2 AQEEVVVKRILQKY-----PYVDLLFGTHN----IHR--LPYLLEDAYFNKEIVVEVWSR 50 Query: 82 NHSPLKGIVHRYPD--RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 ++ I D R + +++ C +C +C + S+ E + I+ Sbjct: 51 EGEIVEQIPRLRHDQLRAFVNIMYGCDKFCTYC-----IVPYTRGKERSRQPEDIIEEIK 105 Query: 140 EKSQ--IWEVIFTGGDP-LILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 + ++ EV G + RL +L L I ++ +RF + P+ Sbjct: 106 QLAEQGYQEVTLLGQNVNAYGKDFDKFPYRLSNLLDDLSKI-NISRVRFTTSH----PKD 160 Query: 192 INPELIQCLKEAGKPVYIAIHA 213 + ELI L + G + H Sbjct: 161 CDDELINVLAKRGN---LVEHF 179 >gi|158317474|ref|YP_001509982.1| radical SAM domain-containing protein [Frankia sp. EAN1pec] gi|158112879|gb|ABW15076.1| Radical SAM domain protein [Frankia sp. EAN1pec] Length = 414 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 8/83 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKSQIWE-----VI 148 I+LK+ C + C +C+ Q+ +S EA + ++ E +I Sbjct: 39 IVLKINSRCNLSCTYCYVYHQADQNWRQQPVTMSPAVVEATARRLAAHAKTHELPWMQII 98 Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171 GG+PL+ H L+ V + L Sbjct: 99 LHGGEPLLAGHDHLRNVAERLLA 121 >gi|331001874|ref|ZP_08325395.1| MiaB-like tRNA modifying enzyme YliG [Lachnospiraceae oral taxon 107 str. F0167] gi|330412197|gb|EGG91591.1| MiaB-like tRNA modifying enzyme YliG [Lachnospiraceae oral taxon 107 str. F0167] Length = 440 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 34/161 (21%), Positives = 55/161 (34%), Gaps = 27/161 (16%) Query: 97 ILLKLLHVCPVYCRFCFR-----REMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFT 150 LK+ C C +C + +KD A I+E + E Sbjct: 146 AYLKIAEGCNKNCTYCIIPSLRGNYRSYPMDDLITQAKDL--AAQGIKELILVAQETTLY 203 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YI 209 G D + K L K+LK L + ++ +R P+ I ELI + K Y+ Sbjct: 204 GVD--LYGEKTLPKLLKELAKVSGIEWIRI----LYCYPEEITDELIDVIANEEKVCKYL 257 Query: 210 AIHANHP-----YEFS-----EEAIAAISRLANA--GIILL 238 I H + ++ ++ I +L GI L Sbjct: 258 DIPIQHASDNILRRMARRTTHDDLVSIIGKLRKNIPGITLR 298 >gi|288926768|ref|ZP_06420678.1| probable arylsulfatase-activating protein AslB [Prevotella buccae D17] gi|288336449|gb|EFC74825.1| probable arylsulfatase-activating protein AslB [Prevotella buccae D17] Length = 407 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 47/177 (26%) Query: 101 LLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFT--GGDP 154 + C + C++C+ + + + V+S + E YIQ ++ + +V+FT GG+P Sbjct: 18 VGASCNLRCKYCYYLEKSHLYRNAPARVMSDELLERFVQEYIQAQT-MSQVLFTWHGGEP 76 Query: 155 LILSHKRLQKVLKTL---------RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L+ + L K + R I + + + + E + KE Sbjct: 77 LM---RPLSFYRKAVALQERYAFGRQIDN----TIQTNGTL-----LTDEWCEFFKEHNW 124 Query: 206 PVYIAIHANHPYEFSEE-------------AIAAISRLANAGIILLSQSVLLKGIND 249 V I+ + P EF +E + I L G+ + +V +ND Sbjct: 125 LVGIS--IDGPQEFHDEYRRTASDKPSWQKVMRGIRLLRKHGVEWNAMAV----VND 175 >gi|168213427|ref|ZP_02639052.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens CPE str. F4969] gi|170714976|gb|EDT27158.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens CPE str. F4969] Length = 169 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R+ C C CF + +D + + + + I V F+GGDPL Sbjct: 23 RVFF--SQGCKHNCIGCF---NPDTHDFNGGEERDIDELIKDLADNPFIDGVTFSGGDPL 77 >gi|110803994|ref|YP_699759.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens SM101] gi|110684495|gb|ABG87865.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens SM101] Length = 169 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R+ C C CF + +D + + + + I V F+GGDPL Sbjct: 23 RVFF--SQGCKHNCIGCF---NPDTHDFNGGEERDIDELIKDLADNPFIDGVTFSGGDPL 77 >gi|110799332|ref|YP_697190.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens ATCC 13124] gi|168205763|ref|ZP_02631768.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens E str. JGS1987] gi|168209741|ref|ZP_02635366.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens B str. ATCC 3626] gi|168217620|ref|ZP_02643245.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens NCTC 8239] gi|169343291|ref|ZP_02864301.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens C str. JGS1495] gi|182624305|ref|ZP_02952090.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens D str. JGS1721] gi|110673979|gb|ABG82966.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens ATCC 13124] gi|169298589|gb|EDS80670.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens C str. JGS1495] gi|170662721|gb|EDT15404.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens E str. JGS1987] gi|170712105|gb|EDT24287.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens B str. ATCC 3626] gi|177910523|gb|EDT72896.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens D str. JGS1721] gi|182380292|gb|EDT77771.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens NCTC 8239] Length = 169 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 22/60 (36%), Gaps = 5/60 (8%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R+ C C CF + +D + + + + I V F+GGDPL Sbjct: 23 RVFF--SQGCKHNCIGCF---NPDTHDFNGGEERDIDELIKDLADNPFIDGVTFSGGDPL 77 >gi|325925005|ref|ZP_08186428.1| GTP cyclohydrolase subunit MoaA [Xanthomonas perforans 91-118] gi|325544589|gb|EGD15949.1| GTP cyclohydrolase subunit MoaA [Xanthomonas perforans 91-118] Length = 343 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 26/108 (24%), Positives = 43/108 (39%), Gaps = 13/108 (12%) Query: 78 IGDNNHSPLKGIVHRY--PDRIL-LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKD 130 + D +P + RY P R L L ++ C C +C + V G LS Sbjct: 6 LPDLATAP---MQDRYGRPLRDLRLSVIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQ 62 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 E + + +V TGG+PL+ L ++ L I+ ++ L Sbjct: 63 LETLVRAFVS-VGVTKVRLTGGEPLLRRD--LPSLIARLAAIEGIEDL 107 >gi|319790295|ref|YP_004151928.1| radical SAM enzyme, Cfr family [Thermovibrio ammonificans HB-1] gi|317114797|gb|ADU97287.1| radical SAM enzyme, Cfr family [Thermovibrio ammonificans HB-1] Length = 345 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 38/203 (18%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVI 148 + + + CP CRFC ++ G + E YIQ E +I V+ Sbjct: 100 NTLCVSTQVGCPAGCRFCL-----TAKDGFTRNLTAGEIVDQYIQVQRDVGENRRISNVV 154 Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-P 206 F G G+PL L+ ++K + + H +L +R V I P + + KE K Sbjct: 155 FMGMGEPL-LNFDNVKK---AVEIMTHRDMLDLSTRKVTVSTVGIVPGIDRMAKEMNKVK 210 Query: 207 VYIAIHANHPYEFS------------EEAIAAISRL-ANAGIILLSQSVLLKGINDDPEI 253 + +++HA E E +AA+ R A+ ++ + V+LKG+ND E Sbjct: 211 LAVSLHATT-DEVRNMLVPLNRKYPIGEIMAALRRYPADNNRRIMIEYVMLKGVNDSLED 269 Query: 254 LANLMRTFVELRIK-------PY 269 L++ + +K PY Sbjct: 270 ARRLVKLVKGIPVKVNLIPFNPY 292 >gi|191170321|ref|ZP_03031874.1| putative coproporphyrinogen III oxidase [Escherichia coli F11] gi|190909129|gb|EDV68715.1| putative coproporphyrinogen III oxidase [Escherichia coli F11] Length = 419 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148 R++ + C +C FC F + + ++ E A + + + + I V Sbjct: 30 RKRLVYLHIPFCATHCTFCGFYQNRFNDDACAHYTDALIREIEMEADSVLHQSAPIHAVY 89 Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 F GG P LS L +++ TLR + + RV D +RI+ Sbjct: 90 FGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138 >gi|89900261|ref|YP_522732.1| molybdenum cofactor biosynthesis protein A [Rhodoferax ferrireducens T118] gi|89344998|gb|ABD69201.1| GTP cyclohydrolase subunit MoaA [Rhodoferax ferrireducens T118] Length = 388 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F ++ +LS ++ + ++ TGG+ Sbjct: 52 ISVTDRCNFRCNYCMPKEIFDKDYAYLPHKALLSFEEITRIAKVFVAH-GVQKIRLTGGE 110 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K ++++++ L + Sbjct: 111 PLL--RKNIERLIEQLAAL 127 >gi|238919809|ref|YP_002933324.1| coproporphyrinogen III oxidase [Edwardsiella ictaluri 93-146] gi|238869378|gb|ACR69089.1| coproporphyrinogen III oxidase-like protein, putative [Edwardsiella ictaluri 93-146] Length = 460 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 45/238 (18%), Positives = 87/238 (36%), Gaps = 41/238 (17%) Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNN-HSPLKGIVHRY--PD 95 +TP +A A + IP E +P + P+ + + + R P+ Sbjct: 5 ITPYLA------------AAEGIPFPERWATMPWRHQQPLPADALTQGWQQLCQRTLPPN 52 Query: 96 RILLKL-LHVCPVYCRFC--FRREM----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + L+ + + C +C FC ++ + + D E+AL +Q+ + I + Sbjct: 53 KRLVYVHIPFCATHCTFCGFYQNRFSEQAIARYFDYLQREIDLESALP-LQQSAPIHAIY 111 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQI---LRFHSRVPIVDPQRINPELIQCLKEAGK 205 GG P L+ ++L +++ LR + + + RV D RI+ CL Sbjct: 112 LGGGTPSALNAEQLHRLIVQLRSLLPLAADCEITVEGRVLNFDDARID----ACLAAGAN 167 Query: 206 PVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI--NDDPEILANLMRTF 261 I I F + R A+ + L+ + D ++ +LM Sbjct: 168 RFSIGIQT-----FDTHLRQRMGRRADRDRAI----AFLRALAERDRAAVICDLMFGL 216 >gi|313619543|gb|EFR91216.1| molybdenum cofactor biosynthesis protein A [Listeria innocua FSL S4-378] Length = 120 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 22/96 (22%), Positives = 44/96 (45%), Gaps = 7/96 (7%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G VH Y I + + C + C +C E + VLS + + + + K I + Sbjct: 9 GRVHDY---IRISVTDRCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFME-LMVKFGIKK 64 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 V TGG+PL+ + + ++++ L I ++ + + Sbjct: 65 VRITGGEPLLRTD--IVEIVRGLGAIPEIEDISITT 98 >gi|311031621|ref|ZP_07709711.1| ribosomal protein S12 methylthiotransferase [Bacillus sp. m3-13] Length = 454 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 52/130 (40%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT- 150 R LK+ C +C FC G ++ S+D + + Q+ + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARG-----LMRSRDPQEVVTQAQQLVDAGYKEIVLTG 196 Query: 151 ------GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + +L+ L ++ ++ +R S ++ +I E+I+ L + Sbjct: 197 IHTGGYGED---MKDYNFAMLLRELDEKVEGLKRIRISS----IEASQITDEVIEVLNNS 249 Query: 204 GKPVYIAIHA 213 K + +H Sbjct: 250 DK-IVRHLHI 258 >gi|325849067|ref|ZP_08170559.1| radical SAM domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325480312|gb|EGC83375.1| radical SAM domain protein [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 358 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 33/162 (20%), Positives = 55/162 (33%), Gaps = 29/162 (17%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQIWEVIFTGGDP 154 + CP C FC + + + K ++ K + L+Y E+ F GG Sbjct: 10 IFIPFLGCPHDCAFCNQV-KITNYKDSINKENTIKQIDQYLSYFPNNDNPKEIAFFGG-S 67 Query: 155 LI-LSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 L + L+ K + +R +R P IN ++ LK+ V Sbjct: 68 FTGLETDVMISYLEIALAYKKKGIIDRIRLSTR-----PDYINNSILDILKKYEVDVIEL 122 Query: 209 -------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQ 240 ++AN H E ++I A + G L Q Sbjct: 123 GIQSLDNEILNANERGHSRE---DSIKASKLIKEYGFKLGHQ 161 >gi|281423817|ref|ZP_06254730.1| translation initiation factor IF-1 [Prevotella oris F0302] gi|299141169|ref|ZP_07034306.1| translation initiation factor IF-1 [Prevotella oris C735] gi|281402044|gb|EFB32875.1| translation initiation factor IF-1 [Prevotella oris F0302] gi|298577129|gb|EFI48998.1| translation initiation factor IF-1 [Prevotella oris C735] Length = 72 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ +E G +IV ISG + YI LPG KV++ +++ K G Sbjct: 22 FRVELENGVQIV----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70 >gi|237817558|ref|ZP_04596548.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus str. 2308 A] gi|237787313|gb|EEP61531.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus str. 2308 A] Length = 474 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 41/164 (25%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145 D L + C C +C T ++ KD L Y+ +I Sbjct: 70 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-RPILDYLDVLHKEIEMIARQRG 120 Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194 E+ F GG P I+ L ++ LR R + +DP+R+ P Sbjct: 121 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 173 Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 E+ L +G + + F + AI+R+ A L Sbjct: 174 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 212 >gi|94969171|ref|YP_591219.1| hypothetical protein Acid345_2144 [Candidatus Koribacter versatilis Ellin345] gi|123381489|sp|Q1IPQ5|RIMO_ACIBL RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|94551221|gb|ABF41145.1| SSU ribosomal protein S12P methylthiotransferase [Candidatus Koribacter versatilis Ellin345] Length = 504 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 54/151 (35%), Gaps = 37/151 (24%) Query: 97 ILLKLLHVCPVYCRFC--------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 +K+ C C FC FR +V++ + A K + E+ Sbjct: 206 AYIKVAEGCDHPCSFCIIPQLRGKFRSRRF----ESVVAEAERLA-------KQGVKEIT 254 Query: 149 FTGGDP------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 G D L L L ++L+ L I+ +Q +RF P +I L+Q + + Sbjct: 255 LIGQDTTCYGEDLGLKDG-LAQLLERLAQIEELQWVRF----LYAYPNKITKRLLQTIAD 309 Query: 203 AGK-PVYIAIHANHPYEFSEEAIAAISRLAN 232 K P Y+ + H A + R+ Sbjct: 310 NPKIPKYMDVPLQH------SAANVLKRMKR 334 >gi|294637137|ref|ZP_06715446.1| molybdenum cofactor biosynthesis protein A [Edwardsiella tarda ATCC 23685] gi|291089671|gb|EFE22232.1| molybdenum cofactor biosynthesis protein A [Edwardsiella tarda ATCC 23685] Length = 329 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 35/225 (15%), Positives = 67/225 (29%), Gaps = 42/225 (18%) Query: 99 LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L + VC C +C + LS + +V TGG+P + Sbjct: 18 LSVTDVCNFRCTYCLPDGYRPASHEAKRFLSLDEIRRVSRAFAALGT-EKVRLTGGEPTL 76 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-- 214 ++ +R ++ L + R+ ++ ++AG I + + Sbjct: 77 RRD--FCDIIAAVRENPGIKTL-----AVTTNGYRMARDVAAW-RQAGLS-AINVSVDSL 127 Query: 215 -----HPYEFSEEAIAA-----ISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVE 263 H + E A I AG + +VL++ +ND +L Sbjct: 128 DARQFHA--ITGEDRFAQVMAGIDAAFAAGFERIKVNTVLMRDVND-----QSLNAFLHW 180 Query: 264 LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF 308 +R +P EG + + +SG Sbjct: 181 IRHRP---IQMRFIELME-----TGEGSDLFR--RHHVSGELIRR 215 >gi|265766970|ref|ZP_06094799.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16] gi|263253347|gb|EEZ24823.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_16] Length = 439 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C + + E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTIASLVEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKSTGETFFDLVKALDRVEGIERYRISS----IEPNLLTDEIIEYVSRSR---SFM 257 Query: 211 IHANHP-YEFSEEAIAAISR 229 H + P S+E + + R Sbjct: 258 PHFHIPLQSGSDEVLQLMRR 277 >gi|256751164|ref|ZP_05492045.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1] gi|256749889|gb|EEU62912.1| Radical SAM domain protein [Thermoanaerobacter ethanolicus CCSD1] Length = 435 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 38/86 (44%), Gaps = 5/86 (5%) Query: 89 IVHRYPDRI---LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQI 144 ++ + +I L + C + C +CF + T ++ E + ++ + Sbjct: 42 LISKKRGKINYITLYITDKCNLACTYCFNKTNNEKVTYTFFPERNIEKIIEFLKRTDIHF 101 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLR 170 + F GG+PL L + ++K+LK + Sbjct: 102 VTIRFFGGEPL-LEIEYIEKILKYIE 126 >gi|253566270|ref|ZP_04843724.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|251945374|gb|EES85812.1| conserved hypothetical protein [Bacteroides sp. 3_2_5] gi|301164592|emb|CBW24151.1| conserved hypothetical protein [Bacteroides fragilis 638R] Length = 439 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C + + E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTIASLVEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKSTGETFFDLVKALDRVEGIERYRISS----IEPNLLTDEIIEYVSRSR---SFM 257 Query: 211 IHANHP-YEFSEEAIAAISR 229 H + P S+E + + R Sbjct: 258 PHFHIPLQSGSDEVLQLMRR 277 >gi|60683077|ref|YP_213221.1| hypothetical protein BF3627 [Bacteroides fragilis NCTC 9343] gi|60494511|emb|CAH09308.1| conserved hypothetical protein [Bacteroides fragilis NCTC 9343] Length = 439 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C + + E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTIASLVEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKSTGETFFDLVKALDRVEGIERYRISS----IEPNLLTDEIIEYVSRSR---SFM 257 Query: 211 IHANHP-YEFSEEAIAAISR 229 H + P S+E + + R Sbjct: 258 PHFHIPLQSGSDEVLQLMRR 277 >gi|53715140|ref|YP_101132.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46] gi|52218005|dbj|BAD50598.1| putative Fe-S oxidoreductase [Bacteroides fragilis YCH46] Length = 439 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 25/140 (17%), Positives = 51/140 (36%), Gaps = 14/140 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C + + E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTIASLVEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKSTGETFFDLVKALDRVEGIERYRISS----IEPNLLTDEIIEYVSRSR---SFM 257 Query: 211 IHANHP-YEFSEEAIAAISR 229 H + P S+E + + R Sbjct: 258 PHFHIPLQSGSDEVLQLMRR 277 >gi|18311485|ref|NP_563419.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens str. 13] gi|18146169|dbj|BAB82209.1| probable anaerobic ribonucleoside-triphosphate reductase activating protein [Clostridium perfringens str. 13] Length = 169 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 22/60 (36%), Gaps = 5/60 (8%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R+ C C CF + +D E + + + I V F+GGDPL Sbjct: 23 RVFF--SQGCKHNCIGCF---NPDTHDFNGGEERDIEELIKDLADNPFIDGVTFSGGDPL 77 >gi|148251870|ref|YP_001236455.1| hypothetical protein BBta_0254 [Bradyrhizobium sp. BTAi1] gi|146404043|gb|ABQ32549.1| hypothetical protein BBta_0254 [Bradyrhizobium sp. BTAi1] Length = 471 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 59/171 (34%), Gaps = 31/171 (18%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155 L+++ C + C CF Q+ E L + + + + V +GG+P Sbjct: 103 ALIEITDHCNLTCPVCF--AESSPQRSHFTPLATVERMLDALVKSEGEPDLVQISGGEPT 160 Query: 156 ILSH--KRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 + L V R I+HV I LR R P + + L E + + + Sbjct: 161 LHPDFFDILAAV--RARPIRHVMINTNGLRIA-REP---------DFVAKLAETKRGLEV 208 Query: 210 AIHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + A+ L + GI + + +G+NDD Sbjct: 209 YLQFDSLSRAGLTNIRGADLRRIRQQALENLEHQGISTTLVATIKRGVNDD 259 >gi|304437610|ref|ZP_07397565.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369423|gb|EFM23093.1| molybdenum cofactor biosynthesis protein A [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 331 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 17/102 (16%), Positives = 45/102 (44%), Gaps = 6/102 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + CR+C V + VL+ ++ + + + +V TGG+PL+ Sbjct: 14 VSVTDCCNLRCRYCMPAHGVKKLRHADVLTYEEILRDVRVLAA-LGVRKVRLTGGEPLVR 72 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + ++++ L+ I ++ + + ++ + EL+ Sbjct: 73 RD--ITRLVRGLKEIPGIETVALTTNGVLL--GTMMDELLDA 110 >gi|83590093|ref|YP_430102.1| radical SAM family protein [Moorella thermoacetica ATCC 39073] gi|83573007|gb|ABC19559.1| Radical SAM [Moorella thermoacetica ATCC 39073] Length = 335 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 41/208 (19%), Positives = 76/208 (36%), Gaps = 39/208 (18%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 + C +YC C+R G++ L++ + + K+ +IF+GG+PL+ Sbjct: 7 TTNQCNLYCDHCYRDA--GARVEDELTTAEAGNLIDE-AAKAGFRIMIFSGGEPLLRPD- 62 Query: 161 RLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPY 217 L +++ + LR S + + EL + LK AG V I++ + P Sbjct: 63 -LPELVSRAAA----RGLRPVLGSNGTL-----LTTELARELKAAGALAVGISLDSCDPA 112 Query: 218 EFSEE---------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 A+A ++ AG+ + + D+ E L +L VEL Sbjct: 113 RHDRLRQKEGAWRKAVAGMAACREAGLPFQVHTTVFDWNQDELEKLTDLA---VELGAVA 169 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 ++ F + I A Sbjct: 170 HHFF----------FLVPTGRAASIEAE 187 >gi|330445221|ref|ZP_08308873.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489412|dbj|GAA03370.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 474 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 49/140 (35%), Gaps = 27/140 (19%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 E+ D + + + ++ C YC +C V S+ + Sbjct: 134 EKFDSLPEPRAEGA---------TAFVSIMEGCSKYCTYC-----VVPYTRGEEVSRPLD 179 Query: 133 AALAYIQEKSQ--IWEVIFTGGDP----LILSHKRLQ---KVLKTLRYIKHVQILRFHSR 183 L I + ++ + EV G + ++ + ++L+ + I + +R+ + Sbjct: 180 DVLFEIAQLAEQGVREVNLLGQNVNAYRGVMHDGEIASFAELLRLVAAIDGIDRIRYTTS 239 Query: 184 VPIVDPQRINPELIQCLKEA 203 PI ++I+ K+ Sbjct: 240 HPI----EFTDDIIEVYKDT 255 >gi|145321187|gb|ABP63662.1| molybdenum cofactor biosynthesis protein A [Achromobacter sp. SY8] Length = 364 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 36/173 (20%), Positives = 75/173 (43%), Gaps = 31/173 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGG 152 + ++ C C +C RE+ G+ + +L+ + E A A+I+ + ++ +GG Sbjct: 42 ISVIDQCNFRCTYCMPREVFGADYPFLRRDELLTFDELERTARAFIRL--GVRKIRLSGG 99 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC----LKEAG-KPV 207 +PL+ L+ ++ L +++ PI N L+ L AG + + Sbjct: 100 EPLLRKD--LEHLVAQLA-----RLVTLAGE-PIDLAMTTNGALLARKAHVLAAAGLRRL 151 Query: 208 YIAIHANHPYEFS---------EEAIAAISRLANAGII-LLSQSVLLKGINDD 250 +++ A P F+ + + I+ +AGI + V+ +G+NDD Sbjct: 152 NVSLDALAPATFARIANTSASVGDVLDGIATAHDAGIRHIKINMVVQRGVNDD 204 >gi|158320272|ref|YP_001512779.1| MiaB-like tRNA modifying enzyme [Alkaliphilus oremlandii OhILAs] gi|158140471|gb|ABW18783.1| MiaB-like tRNA modifying enzyme [Alkaliphilus oremlandii OhILAs] Length = 433 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 24/127 (18%), Positives = 43/127 (33%), Gaps = 19/127 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C YC +C G + ++ E + EV+ TG Sbjct: 141 KTRAFLKIQEGCNQYCTYCIIPYARGPIRSRGPLEIVEEVETLVQ-----KGFKEVVLTG 195 Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 R L +LK + + ++ +R S ++P + ++ L + K Sbjct: 196 IHVASYGKDRSDGTDLIHILKQVNGAQGLERIRLSS----LEPTLFTDDFLRELSQLDK- 250 Query: 207 VYIAIHA 213 I H Sbjct: 251 --ICDHF 255 >gi|83589960|ref|YP_429969.1| tRNA-i(6)A37 modification enzyme MiaB [Moorella thermoacetica ATCC 39073] gi|123725725|sp|Q2RJG3|MIAB_MOOTA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|83572874|gb|ABC19426.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Moorella thermoacetica ATCC 39073] Length = 444 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 43/284 (15%), Positives = 88/284 (30%), Gaps = 77/284 (27%) Query: 41 PVIANLINPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD--RIL 98 P + L+ N Q +PQ E +G+ ++ + R + Sbjct: 101 PYVDLLLGTGN------LQELPQLIEEIKAMHRPRIVVGEQEGPVVEDLPRRRARGAQAF 154 Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAY--IQEKSQIWEVIFTGGDP 154 + + + C +C +C + G ++ + K+ + + I+ V G D Sbjct: 155 VTITYGCNNFCTYCIVPYVRGRERSRRPENIIKEVKELVDQGVIEVTLLGQNVNSYGRD- 213 Query: 155 LILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 L +L+ + ++ ++ +R+ + Sbjct: 214 --LRDGINFAGLLERVNAVEGLKRIRYVT------------------------------- 240 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHH 273 +HP +F+ E + ISRL + + G N + LM Y Sbjct: 241 SHPRDFTPELVTTISRLDKVCEHV--HLPVQAGSNR----ILELMHRG--------YT-- 284 Query: 274 PDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGG 316 H+ ++VA L+ I G+ I+ PG Sbjct: 285 ------REHY-------LELVADLRRHIPGISLTTDLIVGFPGE 315 >gi|257792110|ref|YP_003182716.1| Radical SAM domain-containing protein [Eggerthella lenta DSM 2243] gi|257476007|gb|ACV56327.1| Radical SAM domain protein [Eggerthella lenta DSM 2243] Length = 435 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 24/177 (13%), Positives = 60/177 (33%), Gaps = 22/177 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGDPLI 156 L C C FCF + + + + ++ V TGG+PL+ Sbjct: 89 FFLSLACNRSCYFCFNANQA-DYADRLRVNDAWRDEVDAFADACGGEVTHVGLTGGEPLL 147 Query: 157 LSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG---KPVYI-- 209 + + ++ H+++ ++ L+ L++AG + I Sbjct: 148 HADESVMFCAYVRQRFPRAHIRLYTAG--------DFLDEPLLDRLRDAGLDELRMSIKL 199 Query: 210 -AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 + E ++A+ ++R ++ + ++ G E + L+ ++ Sbjct: 200 DVFDVDRADEIIDDAVDVLARAKRFIPQVMMEMPVIPG---TGEAMRRLLDRLDQVG 253 >gi|157163980|ref|YP_001466045.1| molybdenum cofactor biosynthesis protein A [Campylobacter concisus 13826] gi|166217240|sp|A7ZB87|MOAA_CAMC1 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|112801191|gb|EAT98535.1| molybdenum cofactor biosynthesis protein A [Campylobacter concisus 13826] Length = 322 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 34/176 (19%), Positives = 67/176 (38%), Gaps = 24/176 (13%) Query: 89 IVHRYPDRIL----LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 ++ +Y R++ + + C CR+C + K +L+ ++ + Sbjct: 2 LIDKY-GRVVDYLRISVTQRCNFRCRYCMPTTPFSWTPKENLLTFEEL-FLFVKVAIDEG 59 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 + ++ TGG+PL+ L +K + K L + + P + LK+A Sbjct: 60 VKKIRITGGEPLVRKD--LDVFIKMISDYKPDIDLALTTNGF------MLPHFAKRLKDA 111 Query: 204 G-KPVYIA--------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 G K + ++ E +A +AG+ + +V LKG NDD Sbjct: 112 GLKRINMSLDTLNEQKAKFIAQKSVLHEVLAGFEAALDAGLKVKINTVALKGFNDD 167 >gi|91773564|ref|YP_566256.1| radical SAM family Fe-S protein [Methanococcoides burtonii DSM 6242] gi|91712579|gb|ABE52506.1| Radical SAM protein with Cobalamin (vitamin B12)-binding domain [Methanococcoides burtonii DSM 6242] Length = 487 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 24/107 (22%), Positives = 38/107 (35%), Gaps = 11/107 (10%) Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 P +N+ D HS YP + CP C FC V Sbjct: 194 FPALHLMNLEHYFGLDMSHGKRHSK-----RFYP----IITSRGCPAKCTFCT-AYRVWG 243 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 +K S ++ + Y++EK I E++ D + KR +K+ Sbjct: 244 RKYRHRSPENVIEEMKYVKEKYNIEELLIE-DDNFTANPKRAEKICD 289 >gi|127514616|ref|YP_001095813.1| molybdenum cofactor biosynthesis protein A [Shewanella loihica PV-4] gi|126639911|gb|ABO25554.1| molybdenum cofactor biosynthesis protein A [Shewanella loihica PV-4] Length = 328 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 37/171 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPL 155 L + C C +C + + VLS ++ LA+I + + + ++ TGG+PL Sbjct: 17 LSVTDRCDFRCVYCMSEDPCFLDREQVLSLEE----LAWIGQAFTELGVKKIRLTGGEPL 72 Query: 156 ILSH-KRLQKVLKTLRYIKHVQILRFHSRV--------------PIVDPQRINPELIQCL 200 + + +L K+L L +K + + SR+ + + PEL L Sbjct: 73 VRTDCDQLVKLLGQLPGLKELSMTTNGSRLSKFAGKMHEAGLSRLNISLDTLKPELFTQL 132 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 G E I I AG + +V+L+G NDD Sbjct: 133 TRNGN--------------LERVIQGIDAAKAAGFNRIKINAVILRGQNDD 169 >gi|212637405|ref|YP_002313930.1| Radical SAM [Shewanella piezotolerans WP3] gi|212558889|gb|ACJ31343.1| Radical SAM [Shewanella piezotolerans WP3] Length = 294 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 31/167 (18%), Positives = 65/167 (38%), Gaps = 35/167 (20%) Query: 97 ILLKLLHVCPVY-CRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 ++L++ + C C FC ++ + V + L ++ I V Sbjct: 18 LILQVTNGCSWNQCSFCDMYTASQKRFRAQKIDKVE-----QELLKVSSSQAHISRVFLA 72 Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGK 205 GD + L RL+++ ++ + V +R+ P+ I PE +Q L+E G Sbjct: 73 DGDAMTLPFARLEEICLLIKKYLPSV------TRISSYCLPRNINNKTPEQLQRLRELGL 126 Query: 206 PVYI---------AIHANHPYEFSEEAIAAISRLANAGI----ILLS 239 + + + E ++AA+ ++ AGI ++L+ Sbjct: 127 SLLYIGCESGDDEVLKRINKGETFASSLAALQKIKAAGIKSSVMILN 173 >gi|198276872|ref|ZP_03209403.1| hypothetical protein BACPLE_03077 [Bacteroides plebeius DSM 17135] gi|198270397|gb|EDY94667.1| hypothetical protein BACPLE_03077 [Bacteroides plebeius DSM 17135] Length = 438 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 7/120 (5%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C G + + T+A A + +I GD Sbjct: 148 RTRYFLKVQDGCDYFCSYCTIPFARGRSRNGKIEDLVTQARQAAAEGGKEIVLTGVNIGD 207 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + + ++K L ++ ++ R S ++P + E+I+ + ++ + H Sbjct: 208 FGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIEYVAQSRR---FMPHF 260 >gi|170760017|ref|YP_001785664.1| radical SAM domain-containing protein [Clostridium botulinum A3 str. Loch Maree] gi|169407006|gb|ACA55417.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch Maree] Length = 299 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 31/191 (16%) Query: 99 LKLLHVCPVYCRFC-FRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG--DP 154 + + C C +C R E G V + K+ + K + VI TG DP Sbjct: 28 MNIYKGCCHGCIYCDSRSECYGIDNFDKVRAKKNAIQIIKNELRKKRKKGVIGTGAMSDP 87 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFH----SRV-PIVDPQRINPELIQCLKEAGKPVYI 209 + L +L + ++ + L F ++ +V + ++++ +K + Sbjct: 88 YNPFEREL--MLTRM-ALEEINTLNFGAAIATKSNLVVR----DIDILKKIKTYSPTLVK 140 Query: 210 AIHANHPYEFSEEAI----------AAISRLANAGI---ILLSQSVLLKGINDDPEILAN 256 H E ++ AI +L+ GI ILL +L IND+ E + Sbjct: 141 ITITTHDDELCKKVEPNVCVTSKRFQAIKQLSYNGIFTGILL--MPILPFINDNGENIVK 198 Query: 257 LMRTFVELRIK 267 +++T E K Sbjct: 199 IVKTAHECGAK 209 >gi|116753780|ref|YP_842898.1| radical SAM domain-containing protein [Methanosaeta thermophila PT] gi|116665231|gb|ABK14258.1| Radical SAM domain protein [Methanosaeta thermophila PT] Length = 383 Score = 38.9 bits (90), Expect = 1.1, Method: Composition-based stats. Identities = 29/124 (23%), Positives = 51/124 (41%), Gaps = 16/124 (12%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 + + P +++ CP C +C+ E GS ++ + K+ L ++ Sbjct: 1 MQRKRPFHVMIIPTLGCPSKCSYCWSSEE-GSPVMSIDTVKEIVEWLKLFRDDPV--TFT 57 Query: 149 FTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQ----RINPELIQCLKEA 203 F GG+PL+ + +K L L + H+ P Q R+ PEL + LKE Sbjct: 58 FHGGEPLLAGVEFYRKALPLLADGLSHL--------TPSFALQTNLWRLTPELAEVLKEY 109 Query: 204 GKPV 207 P+ Sbjct: 110 DVPI 113 >gi|296116145|ref|ZP_06834763.1| molybdenum cofactor biosynthesis protein A [Gluconacetobacter hansenii ATCC 23769] gi|295977251|gb|EFG84011.1| molybdenum cofactor biosynthesis protein A [Gluconacetobacter hansenii ATCC 23769] Length = 342 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 27/169 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C +M K +LS ++ E A + + + TGG+PL+ Sbjct: 22 VSVTDRCDMRCLYCMAEDMTFLPKPEILSYEELERICAAFI-HNGVRRIRVTGGEPLVRR 80 Query: 159 H-----KRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAG-KPVYI 209 + + L+ + L SR+ E L AG + V I Sbjct: 81 DVMSFFSAMGEWLRRPVDEPRLDELTLTTNGSRL---------GEFAIPLHAAGVRRVNI 131 Query: 210 AIHANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGINDD 250 ++ + P F+ + AG+ + +V + G+NDD Sbjct: 132 SMDSLDPTRFATITRRGNLRKTLDGVRAAKEAGLKIRINAVAMAGLNDD 180 >gi|114617067|ref|XP_001149876.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes] gi|114617069|ref|XP_001149952.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes] gi|114617071|ref|XP_001150010.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes] gi|114617073|ref|XP_001150070.1| PREDICTED: hypothetical protein isoform 4 [Pan troglodytes] Length = 644 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%) Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173 + V + + + Y+ + E + + K+L +LK L Sbjct: 245 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 298 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 ++ L + P P+ + L+ G ++IH H F E +S L + Sbjct: 299 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSMLEDT 351 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288 G L S+ +L I D E L R + +I YL G F++ ++ Sbjct: 352 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 408 Query: 289 EGQKIVASLKE 299 I+ ++K Sbjct: 409 RSLGIMQTVKG 419 >gi|329954832|ref|ZP_08295849.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides clarus YIT 12056] gi|328526936|gb|EGF53947.1| ribosomal protein S12 methylthiotransferase RimO [Bacteroides clarus YIT 12056] Length = 432 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + + L ++++ + I V+ +R H P P +L + ++E Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLHYAYPAHFPM----DLFRVMRERPN 244 >gi|302348325|ref|YP_003815963.1| Radical SAM domain protein [Acidilobus saccharovorans 345-15] gi|302328737|gb|ADL18932.1| Radical SAM domain protein [Acidilobus saccharovorans 345-15] Length = 479 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 8/111 (7%) Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGS 120 P E+L+ LP D + + ++ P RI + CP C +C G Sbjct: 167 PFIEDLDKLPWPDRDLLDMDKYTLFN-----KPIRIAHVMASRGCPYGCMYCITSYYWGR 221 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 + + + + Y+ + + E++FT D + + +++ + L+ Sbjct: 222 RYRYRSAKNVVDE-IEYLVNRYRAREIVFT-DDEFTANWRFVREFIAELKS 270 >gi|187925302|ref|YP_001896944.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phytofirmans PsJN] gi|229890466|sp|B2SYI5|MIAB_BURPP RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|187716496|gb|ACD17720.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia phytofirmans PsJN] Length = 457 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 26/138 (18%) Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143 H P R+ + ++ C YC +C V S+ + L I Sbjct: 138 HLPPARVDGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192 Query: 144 IWEVIFTGGD------PLILSHKRLQ---KVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 + EV G + L L + ++++ + I ++ +R+ + P+ Sbjct: 193 VREVTLLGQNVNAYRAGLTLGSTEIADFAQLIEYVADIPGIERIRYTTSH----PKEFTQ 248 Query: 195 ELIQCLKEAGKPVYIAIH 212 LI + K + +H Sbjct: 249 RLIDTYAKVPK-LVSHLH 265 >gi|304314308|ref|YP_003849455.1| MoaA related protein [Methanothermobacter marburgensis str. Marburg] gi|302587767|gb|ADL58142.1| MoaA related protein [Methanothermobacter marburgensis str. Marburg] Length = 227 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 33/87 (37%), Gaps = 6/87 (6%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 I+ L C + CR+CF + + + L I + I V+ GG+P + Sbjct: 14 IITVLTPTCNLRCRYCF---FTPRNCREYDAERIADRVLR-ISSEEGIDSVLIAGGEPTL 69 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSR 183 L + + L HV I +R Sbjct: 70 QRD--LPEFTEALSRDLHVTISTNGTR 94 >gi|297568775|ref|YP_003690119.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2] gi|296924690|gb|ADH85500.1| Radical SAM domain protein [Desulfurivibrio alkaliphilus AHT2] Length = 290 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 10/91 (10%) Query: 95 DRILLKLLHVC-PVYCRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 D I+L++ C C FC +R E + +++ LA++ + + Sbjct: 16 DSIILQVTVGCSHNRCTFCGTYRAEKFRLKDEATIAAD-----LAFVARHCRRQSRIFLA 70 Query: 151 GGDPLILSHKRLQKVLKTLR-YIKHVQILRF 180 GD LIL +RL+++L+ +R V+ +R Sbjct: 71 DGDVLILPQERLRRLLQDIRQQAPWVKRVRL 101 >gi|300022130|ref|YP_003754741.1| radical SAM protein [Hyphomicrobium denitrificans ATCC 51888] gi|299523951|gb|ADJ22420.1| Radical SAM domain protein [Hyphomicrobium denitrificans ATCC 51888] Length = 465 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 11/112 (9%) Query: 69 ILPEEREDPIGDNN-HSPLKGIVHRY---PDRILLKLLHVCPVYCRFC--FRREMVGSQ- 121 ++P P+G+++ G++ R+ + C +C FC +R +Q Sbjct: 28 VMPWRDRRPLGEDDIADIWSGVLAECGPPRRRLAYIHVPFCANHCLFCGFYRNAYTPAQA 87 Query: 122 ---KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 +++ + E A I+ I V GG P LS L ++++ +R Sbjct: 88 ATYTDLLVAEIEREPGAAGIRHHP-IDAVYLGGGTPSALSASDLARIVEAVR 138 >gi|239827771|ref|YP_002950395.1| RNA modification enzyme, MiaB family [Geobacillus sp. WCH70] gi|239808064|gb|ACS25129.1| RNA modification enzyme, MiaB family [Geobacillus sp. WCH70] Length = 451 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 46/124 (37%), Gaps = 11/124 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150 R LK+ C +C FC G + + + + +I I T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIRQAQQLVD--AGYKEIVLTGIHT 199 Query: 151 GGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GG L +L+ L + ++ LR S ++ +I E+I+ L+ + K + Sbjct: 200 GGYGTDLKDYSFAALLRDLDEQVVGLKRLRISS----IEASQITDEIIEVLQRSDK-IVR 254 Query: 210 AIHA 213 +H Sbjct: 255 HLHI 258 >gi|254501345|ref|ZP_05113496.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Labrenzia alexandrii DFL-11] gi|222437416|gb|EEE44095.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Labrenzia alexandrii DFL-11] Length = 486 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 24/123 (19%) Query: 92 RYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 + P L + C +C FC R V +++ AA S + EV Sbjct: 174 KRPPAAFLTVQEGCDKFCTFCVVPYTRGAEVSRSVEQIVTEAQRMAA-------SGVREV 226 Query: 148 IFTG-------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR-INPELIQC 199 G G+ S L K+L+ L I + LR+ + P R ++ +LI+ Sbjct: 227 TLLGQNVNAYHGEAADGSTWGLGKLLRRLSEIDGLDRLRYTTSHP-----RDMDDDLIEA 281 Query: 200 LKE 202 +E Sbjct: 282 HRE 284 >gi|29653907|ref|NP_819599.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA 493] gi|153208814|ref|ZP_01947041.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii 'MSU Goat Q177'] gi|161830593|ref|YP_001596498.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella burnetii RSA 331] gi|165919097|ref|ZP_02219183.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA 334] gi|212212941|ref|YP_002303877.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella burnetii CbuG_Q212] gi|212218810|ref|YP_002305597.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Coxiella burnetii CbuK_Q154] gi|81629338|sp|Q83DX3|MIAB_COXBU RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|229890502|sp|B6J853|MIAB_COXB1 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|229890503|sp|B6J1A4|MIAB_COXB2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|229890505|sp|A9NC58|MIAB_COXBR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|29541170|gb|AAO90113.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii RSA 493] gi|120575720|gb|EAX32344.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii 'MSU Goat Q177'] gi|161762460|gb|ABX78102.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA 331] gi|165917231|gb|EDR35835.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Coxiella burnetii RSA 334] gi|212011351|gb|ACJ18732.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii CbuG_Q212] gi|212013072|gb|ACJ20452.1| tRNA 2-methylthioadenosine synthase [Coxiella burnetii CbuK_Q154] Length = 439 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 19/125 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDP 154 + ++ C YC FC V S+ + +A + + + E+ G + Sbjct: 148 AFVSIMEGCSKYCTFC-----VVPYTRGEEISRPFDDVIAEVASLCEQGVREITLLGQNV 202 Query: 155 ----LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 ++ + L ++ L + +++ +RF + P + LI E K + Sbjct: 203 NDYRGLMHDGQVADLALLIHYLAAMDNIERIRFTTSHPSA----FSENLIDAYAEEPK-L 257 Query: 208 YIAIH 212 +H Sbjct: 258 ANHLH 262 >gi|297250097|ref|ZP_06933798.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus bv. 5 str. B3196] gi|297173966|gb|EFH33330.1| oxygen-independent coproporphyrinogen III oxidase [Brucella abortus bv. 5 str. B3196] Length = 458 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 41/164 (25%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145 D L + C C +C T ++ KD L Y+ +I Sbjct: 54 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-RPILDYLDVLHKEIEMIARQRG 104 Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194 E+ F GG P I+ L ++ LR R + +DP+R+ P Sbjct: 105 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 157 Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 E+ L +G + + F + AI+R+ A L Sbjct: 158 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 196 >gi|113431887|emb|CAJ31889.1| putative oxydoreductase [Streptococcus thermophilus] Length = 399 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 7/98 (7%) Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK- 141 S G++ + +++ + + C + C +C+ ++ + + I K Sbjct: 35 DSVEDGVLKK----VVINISNSCNLSCSYCYADGGNYGMDNRIMDLTTADNIIQEIASKG 90 Query: 142 -SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 +QI +I GG+P L+ + ++ L + +V + Sbjct: 91 VTQINRLILFGGEPF-LNIELFIYFIEKLSTLLNVVKI 127 >gi|55821919|ref|YP_140361.1| hypothetical protein stu1951 [Streptococcus thermophilus LMG 18311] gi|55823837|ref|YP_142278.1| hypothetical protein str1951 [Streptococcus thermophilus CNRZ1066] gi|55737904|gb|AAV61546.1| conserved hypothetical protein [Streptococcus thermophilus LMG 18311] gi|55739822|gb|AAV63463.1| conserved hypothetical protein [Streptococcus thermophilus CNRZ1066] Length = 424 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 41/98 (41%), Gaps = 7/98 (7%) Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK- 141 S G++ + +++ + + C + C +C+ ++ + + I K Sbjct: 60 DSVEDGVLKK----VVINISNSCNLSCSYCYADGGNYGMDNRIMDLTTADNIIQEIASKG 115 Query: 142 -SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 +QI +I GG+P L+ + ++ L + +V + Sbjct: 116 VTQINRLILFGGEPF-LNIELFIYFIEKLSTLLNVVKI 152 >gi|62318012|ref|YP_223865.1| coproporphyrinogen III oxidase [Brucella abortus bv. 1 str. 9-941] gi|83269988|ref|YP_419279.1| coproporphyrinogen III oxidase [Brucella melitensis biovar Abortus 2308] gi|189023264|ref|YP_001933005.1| coproporphyrinogen III oxidase [Brucella abortus S19] gi|254691555|ref|ZP_05154809.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870] gi|254695149|ref|ZP_05156977.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya] gi|254698249|ref|ZP_05160077.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str. 86/8/59] gi|254731692|ref|ZP_05190270.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292] gi|256256741|ref|ZP_05462277.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68] gi|260544199|ref|ZP_05820020.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella abortus NCTC 8038] gi|260757180|ref|ZP_05869528.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870] gi|260759451|ref|ZP_05871799.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292] gi|260762695|ref|ZP_05875027.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str. 86/8/59] gi|260882988|ref|ZP_05894602.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68] gi|261215505|ref|ZP_05929786.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya] gi|62198205|gb|AAX76504.1| HemN-2, oxygen-independent coproporphyrinogen III oxidase [Brucella abortus bv. 1 str. 9-941] gi|82940262|emb|CAJ13327.1| Oxygen-independent coproporphyrinogen III oxidase HemN:Elongator protein 3/MiaB/NifB:Radical SAM [Brucella melitensis biovar Abortus 2308] gi|189021838|gb|ACD74559.1| Oxygen-independent coproporphyrinogen III oxidase HemN [Brucella abortus S19] gi|260097470|gb|EEW81344.1| oxygen-independent coproporphyrinogen III oxidase HemN [Brucella abortus NCTC 8038] gi|260669769|gb|EEX56709.1| coproporphyrinogen III oxidase [Brucella abortus bv. 4 str. 292] gi|260673116|gb|EEX59937.1| coproporphyrinogen III oxidase [Brucella abortus bv. 2 str. 86/8/59] gi|260677288|gb|EEX64109.1| coproporphyrinogen III oxidase [Brucella abortus bv. 6 str. 870] gi|260872516|gb|EEX79585.1| coproporphyrinogen III oxidase [Brucella abortus bv. 9 str. C68] gi|260917112|gb|EEX83973.1| coproporphyrinogen III oxidase [Brucella abortus bv. 3 str. Tulya] Length = 450 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 41/164 (25%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIW------- 145 D L + C C +C T ++ KD L Y+ +I Sbjct: 46 QDTSLYLHIPFCRSMCWYC--------GCHTTITEKD-RPILDYLDVLHKEIEMIARQRG 96 Query: 146 ------EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH-----SRVPIVDPQRINP 194 E+ F GG P I+ L ++ LR R + +DP+R+ P Sbjct: 97 RSFNLGEIHFGGGTPTIIQPDELVALMAALRD-------RLGFAGELNAAVEIDPRRMTP 149 Query: 195 ELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIIL 237 E+ L +G + + F + AI+R+ A L Sbjct: 150 EMAAALAYSGITRASLGV-----QSFDPKVQKAINRIQTAKTTL 188 >gi|322807650|emb|CBZ05225.1| putative SAM methylase domain protein [Clostridium botulinum H04402 065] Length = 715 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 11/78 (14%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WEVI--FTG 151 + L C + C++C+ V V+S + A+ YI + I VI F G Sbjct: 22 VTFILTQDCNLRCKYCYE---VNKNNQNVMSFGTAKKAIDYILDNHDIFTSKAVIWDFIG 78 Query: 152 GDPLI---LSHKRLQKVL 166 G+PL+ L K + ++ Sbjct: 79 GEPLLEIDLMDKIIDYIM 96 >gi|309781163|ref|ZP_07675900.1| molybdenum cofactor biosynthesis protein A [Ralstonia sp. 5_7_47FAA] gi|308919984|gb|EFP65644.1| molybdenum cofactor biosynthesis protein A [Ralstonia sp. 5_7_47FAA] Length = 373 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 34/79 (43%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +++ +LS ++ E E + ++ TGG+ Sbjct: 48 ISVTDRCNFRCVYCMPKDVFDKDYRFLRHSELLSFEEIERMARLFIEH-GVEKIRLTGGE 106 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ ++++++ L + Sbjct: 107 PLLRKD--IERLVEKLARL 123 >gi|306821141|ref|ZP_07454757.1| pyruvate formate-lyase activating enzyme [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304550834|gb|EFM38809.1| pyruvate formate-lyase activating enzyme [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 167 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 1/68 (1%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C C CF ++ + G + + + ++Y+ E +I + GG+PL ++ + Sbjct: 24 SGCTHNCFNCFNKDYQNFEYGNEFTQRQIDEIISYMSED-EIAGLTILGGEPLQQNYDDM 82 Query: 163 QKVLKTLR 170 LK +R Sbjct: 83 IDFLKQVR 90 >gi|291458400|ref|ZP_06597790.1| pyruvate formate-lyase 1-activating enzyme [Oribacterium sp. oral taxon 078 str. F0262] gi|291418933|gb|EFE92652.1| pyruvate formate-lyase 1-activating enzyme [Oribacterium sp. oral taxon 078 str. F0262] Length = 269 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 35/204 (17%), Positives = 70/204 (34%), Gaps = 45/204 (22%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 P L L C + CR+C + + + A Y + + + Sbjct: 41 PGTRFLIFLKGCAMRCRYC---HNPDTWDYHSEDMRSADSLLDQAERYREYWGEDGGITV 97 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILR-FHS-----------RVPIVDP----QRIN 193 +GGDPLI L ++ + + R ++ + P ++ Sbjct: 98 SGGDPLIQIDFVL-QLFEEAKR-------RGINTCLDTSAQPFTRKKPFFGKFTKLMKLT 149 Query: 194 PELIQCLKE--AGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 ++ +KE + K ++ N E + L+ G+ + + VL+ G+ D Sbjct: 150 DTVLLDIKEIDSRKHRWLTGWGN------ENILDCARYLSETGVPVWIRHVLVPGVTDRD 203 Query: 252 EILANL------MRTFVELRIKPY 269 E L +L + ++ I PY Sbjct: 204 EELRSLKSFIDSLHNVKKVEILPY 227 >gi|290958805|ref|YP_003489987.1| hypothetical protein SCAB_43781 [Streptomyces scabiei 87.22] gi|260648331|emb|CBG71442.1| conserved hypothetical protein [Streptomyces scabiei 87.22] Length = 293 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 36/192 (18%), Positives = 69/192 (35%), Gaps = 26/192 (13%) Query: 98 LLKLLHVCPVYCRFCFRR---EMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWE--- 146 ++ C + C +CF G + E A + + Q Sbjct: 23 VINPYTGCVLGCAYCFASFAGRQFGRSVKEWGDYLYVKKNAVELARTELAKMPQDKRQGT 82 Query: 147 -VIFTGGDPLILSHK--RL-QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 ++ + DP RL + +L+ L+ + + ++R ++ P+V R + +L+ L Sbjct: 83 MLLSSVTDPYQGHETQYRLTRGILRELQAVGYPGLVRILTKSPVVT--R-DIDLLTGLPR 139 Query: 203 AGKPVYIAIH---ANHPYEF-SEEAIAAISRLA---NAGIILLS-QSVLLKGINDDPEIL 254 A + + + E + A + LA AGI + LL PE+L Sbjct: 140 AEVGMTVTTSDDKVSRWLEVRAPLASRRLRTLAELNEAGIPTYAFVGPLLPHFATQPELL 199 Query: 255 ANLMRTFVELRI 266 +L VE + Sbjct: 200 DDLFGQLVEAGV 211 >gi|269118813|ref|YP_003306990.1| MiaB-like tRNA modifying enzyme [Sebaldella termitidis ATCC 33386] gi|268612691|gb|ACZ07059.1| MiaB-like tRNA modifying enzyme [Sebaldella termitidis ATCC 33386] Length = 430 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 57/146 (39%), Gaps = 23/146 (15%) Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 +S K V R R +K+ C +C +C + S+ E+ L I Sbjct: 126 DQKEYSSQKYAVSRDKARAFVKIQDGCTKFCSYCKI-----PYARGMSRSRQPESVLEEI 180 Query: 139 Q--EKSQIWEVIFTGGDPLILS--------HKRLQKVLKTLRYIKHVQILRFHSRVPIVD 188 + ++ E++ TG + LS + +L+ + I+ + +R S V Sbjct: 181 KFLGEAGYKEIVVTGIN---LSEYGSDFGENINFDYILEKILKIEEIDRVRVSS----VY 233 Query: 189 PQRINPELIQCLKEAGKPVYIAIHAN 214 P ++ + I LKE K + +H + Sbjct: 234 PDTLSEKFISLLKE-NKKLMPHLHVS 258 >gi|170291224|ref|YP_001738040.1| radical SAM domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170175304|gb|ACB08357.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 498 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 15/112 (13%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 ++ LL++ C CRFC + ++ + A+ Y E+ G D Sbjct: 181 NKFLLEISRGCGWGCRFCGMGWHWRPRLDAPMN--EVREAIEY-ASDLGFREIFIIGSDA 237 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRV--PIVDPQRINPELIQCLKEAG 204 + + TL I + P + +++ EL+ ++ G Sbjct: 238 ASS-----KAIKDTLWEIAE-----IGLKASTPSIRADQVDVELLDLIRSTG 279 >gi|168179004|ref|ZP_02613668.1| radical SAM superfamily protein [Clostridium botulinum NCTC 2916] gi|226950767|ref|YP_002805858.1| radical SAM domain-containing protein [Clostridium botulinum A2 str. Kyoto] gi|182670221|gb|EDT82197.1| radical SAM superfamily protein [Clostridium botulinum NCTC 2916] gi|226844406|gb|ACO87072.1| radical SAM domain protein [Clostridium botulinum A2 str. Kyoto] Length = 715 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 11/78 (14%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WEVI--FTG 151 + L C + C++C+ V V+S + A+ YI + I VI F G Sbjct: 22 VTFILTQDCNLRCKYCYE---VNKNNQNVMSFGTAKKAIDYILDNHDIFTSKAVIWDFIG 78 Query: 152 GDPLI---LSHKRLQKVL 166 G+PL+ L K + ++ Sbjct: 79 GEPLLEIDLMDKIIDYIM 96 >gi|164688504|ref|ZP_02212532.1| hypothetical protein CLOBAR_02149 [Clostridium bartlettii DSM 16795] gi|164602917|gb|EDQ96382.1| hypothetical protein CLOBAR_02149 [Clostridium bartlettii DSM 16795] Length = 445 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 16/121 (13%) Query: 92 RYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 RY LK+ C C +C ++ G + + +D A + E+ + E+ Sbjct: 138 RYVSTPSHMAYLKIGEGCDNKCTYCIIPKLRGKYRSRKM--EDIIAEAKKLAER-GVKEL 194 Query: 148 IFTGGD----PLIL-SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + D L L ++L +L+ L I+ + +R V P+ I EL++ +K+ Sbjct: 195 VVIAQDTTKYGLDLYGEEKLANLLEELAQIEGFKWIR----VMYSYPESITEELVKVIKK 250 Query: 203 A 203 Sbjct: 251 Y 251 >gi|58039893|ref|YP_191857.1| putative oxidoreductase [Gluconobacter oxydans 621H] gi|58002307|gb|AAW61201.1| Putative oxidoreductase [Gluconobacter oxydans 621H] Length = 400 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 11/125 (8%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R LL++ C C FC G + T + A A ++ Q E++ TG D Sbjct: 111 RALLQVQQGCDHRCTFCIIPYGRGDSRSTPV-EDAIARAEALVEAGHQ--EIVLTGVD-- 165 Query: 156 ILSH-----KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 I S K L + + LR + V+ LR S P++ + + L E + Sbjct: 166 IASWQGSGGKGLGALCRELLRRVDGVRRLRLSSIDPVLLDAQTGDADLWWLLENEPRLMP 225 Query: 210 AIHAN 214 +H + Sbjct: 226 HLHLS 230 >gi|20094976|ref|NP_614823.1| molybdenum cofactor biosynthesis protein [Methanopyrus kandleri AV19] gi|24211984|sp|Q8TV60|MOAA_METKA RecName: Full=Probable molybdenum cofactor biosynthesis protein A gi|19888230|gb|AAM02753.1| Molybdenum cofactor biosynthesis enzyme [Methanopyrus kandleri AV19] Length = 307 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 37/84 (44%), Gaps = 7/84 (8%) Query: 97 ILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + + C + C +C R E G + LS+ + L E + +V TGG+PL Sbjct: 12 VRISVTMRCNMACVYCHREGERPGRSE---LSAAEWGRLLRACAE-IGVRKVKITGGEPL 67 Query: 156 ILSHKRLQKVLKTLRYIKHVQILR 179 + L ++++ + V ++ Sbjct: 68 LRRD--LIEIIENAEGFEEVSLVT 89 >gi|330836973|ref|YP_004411614.1| MiaB-like tRNA modifying enzyme [Spirochaeta coccoides DSM 17374] gi|329748876|gb|AEC02232.1| MiaB-like tRNA modifying enzyme [Spirochaeta coccoides DSM 17374] Length = 453 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 12/128 (9%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R LK+ C C FC R V K L++ + + ++ E+ EV+ TG + Sbjct: 164 QRAYLKVQDGCDNACAFC--RVHVARGKAVDLNADEVVRRVMHL-ERQGFHEVVLTGVN- 219 Query: 155 LIL---SHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 L + + L +++ L +I +R S ++P ++ L+ L + Y Sbjct: 220 LTMYGYKGEGLGALVEKILEHIGSDMRIRLSS----LEPDHVDGRLLDTLHDPRMQPYFH 275 Query: 211 IHANHPYE 218 I + Sbjct: 276 IPVQSANQ 283 >gi|300728421|ref|ZP_07061783.1| translation initiation factor IF-1 [Prevotella bryantii B14] gi|299774340|gb|EFI70970.1| translation initiation factor IF-1 [Prevotella bryantii B14] Length = 72 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ +E G +IV ISG + YI LPG KV++ +++ K G Sbjct: 22 FRVELENGVQIV----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70 >gi|328698428|ref|XP_001952088.2| PREDICTED: molybdenum cofactor biosynthesis protein 1-like isoform 1 [Acyrthosiphon pisum] Length = 546 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 37/225 (16%), Positives = 92/225 (40%), Gaps = 35/225 (15%) Query: 92 RYPDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R + + + L C + C +C + S++ +LS+ + ++ ++ + ++ T Sbjct: 33 RKHNYLRVSLTERCNLRCEYCMPLKGAKLSEQSKLLSNNEIVRLVSLFAKQ-GVDKIRIT 91 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P + + +++++LR I+ ++ + + + L+ L+ AG + Sbjct: 92 GGEPTVKKD--IIQIVESLRDIRKLKTIAMTTNGLT-----LTKHLVD-LQRAGLN-ALN 142 Query: 211 IHANHPYE-----FSEEAIAAISRLANAGIILLSQ---------SVLLKGINDDPEILAN 256 + + E + + R+ AGI L Q VL++GIN + L + Sbjct: 143 VSLDTLQENTYGKITRRDGRLLKRVL-AGIDLALQLGFSPVKVNCVLMRGIN--FDELGD 199 Query: 257 LMRTFVELRIKPYYLHHPDLAAGTSHFR----LTIEEG-QKIVAS 296 + + +I Y + + + + +E ++I+ S Sbjct: 200 FVEMTRDRKIN--YRFIEFMPFSMNDWEEKRMVPYKEAIREIMKS 242 >gi|329957659|ref|ZP_08298134.1| tRNA methylthiotransferase YqeV [Bacteroides clarus YIT 12056] gi|328522536|gb|EGF49645.1| tRNA methylthiotransferase YqeV [Bacteroides clarus YIT 12056] Length = 445 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 26/140 (18%), Positives = 52/140 (37%), Gaps = 14/140 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C YC +C + + E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYYCSYCTI-PFARGRSRNGSIASLVEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + + Sbjct: 205 IGDFGKSTGETFFDLVKALDEVEGIERYRISS----IEPNLLTDEIIKFVSRSKR---FM 257 Query: 211 IHANHP-YEFSEEAIAAISR 229 H + P S+E + + R Sbjct: 258 PHFHIPLQSGSDEVLKLMRR 277 >gi|296166708|ref|ZP_06849133.1| radical SAM domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] gi|295897973|gb|EFG77554.1| radical SAM domain protein [Mycobacterium parascrofulaceum ATCC BAA-614] Length = 516 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 39/207 (18%), Positives = 76/207 (36%), Gaps = 35/207 (16%) Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR-----E 116 P K + P DP+ L + ++ +L + C + C CF Sbjct: 81 PTKAHVPDAPG-NFDPVPSAYLQGLPQMQTQHTCILLEDIAATCNLRCPTCFADSSPDLR 139 Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 V + + + A +E ++ V+ +GG+P + +L ++L L Sbjct: 140 DVVAVGDVLANVDQRLA-----RENGRLDVVMLSGGEPTLHP--QLPELLAELSSRP--- 189 Query: 177 ILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIAIHAN--------HPY--EFSEEAI 224 I R + + RI + EL+ L E + + + + H + S Sbjct: 190 ITRI---LLNTNGVRIAHDDELLDLLTEHRERAEVYLQYDGLSPAAHRHHRGGDLSRVKR 246 Query: 225 AAISRLANAGIILLSQSVLLK--GIND 249 AA+ RL++ + + V+ G+ND Sbjct: 247 AALRRLSDR--EIFTTLVMTAALGVND 271 >gi|317132121|ref|YP_004091435.1| protein of unknown function DUF512 [Ethanoligenens harbinense YUAN-3] gi|315470100|gb|ADU26704.1| protein of unknown function DUF512 [Ethanoligenens harbinense YUAN-3] Length = 436 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 58/163 (35%), Gaps = 36/163 (22%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 + L+ C +C FCF ++ + T+ D +A L+++ I T D Sbjct: 77 ETYLMDKKRRCQNHCVFCFIDQLPKGLRKTLYFKDD-DARLSFLMGN-YITLTNLTEQDV 134 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 + + + + + H+ P + ++ G + Sbjct: 135 ----DRIIDMHISPI-------NVSVHTTNPAL-----------RVRMMGN--------S 164 Query: 215 HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 H E A+ RLA AG L Q VL G+ND E+ +L Sbjct: 165 HAGE----ALVHFYRLAEAGTKLNCQLVLCPGLNDGAELARSL 203 >gi|160934421|ref|ZP_02081808.1| hypothetical protein CLOLEP_03294 [Clostridium leptum DSM 753] gi|156867094|gb|EDO60466.1| hypothetical protein CLOLEP_03294 [Clostridium leptum DSM 753] Length = 329 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 30/161 (18%), Positives = 56/161 (34%), Gaps = 23/161 (14%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDP 154 CP C FC ++ + G + E A ++ K + E+ F GG Sbjct: 2 AFFIPHAGCPHQCSFCDQKSITGESRRVEPGEVAAVLEDARQALRGKQKASEIAFFGGSF 61 Query: 155 LILSHKRLQKVLKTLRYIKHVQI-----LRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208 + + +LK V+ +R +R P I+P +++ LK+ G K + Sbjct: 62 TAVPPAYQESLLKAAY--PFVKRGDFSGIRISTR-----PDAIDPPVLERLKQYGVKSIE 114 Query: 209 IAIH--------ANHPYEFSEEAIAAISRLANAGIILLSQS 241 + N +++ + A + G L Q Sbjct: 115 LGAQSMDDRVLVLNQRGHTAQDVVNASRMIREYGFSLGLQM 155 >gi|126731382|ref|ZP_01747189.1| radical SAM domain protein [Sagittula stellata E-37] gi|126708293|gb|EBA07352.1| radical SAM domain protein [Sagittula stellata E-37] Length = 329 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 61/155 (39%), Gaps = 14/155 (9%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGG 152 P + +C + C C+ + +++ + E+ L ++++ + E+ FTGG Sbjct: 46 PQTLWFNTGTLCNITCANCYIESSPENDSLVYITTAEVESYLDQLEDRDWGVREIGFTGG 105 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 +P ++ + + L V IL R P++ P + L + E G + + I Sbjct: 106 EPF-MNPEMIAMTRAALERGYEVLILTNAMR-PMMRP-HVQRGLRELQAEHGDRLNLRIS 162 Query: 213 ANH--PYEFSEE--------AIAAISRLANAGIIL 237 +H + E I + L + GI + Sbjct: 163 LDHYSASQHDAERGAGSFAKTIEGMRWLRDEGIRM 197 >gi|325846594|ref|ZP_08169509.1| iron-only hydrogenase maturation rSAM protein HydG [Anaerococcus hydrogenalis ACS-025-V-Sch4] gi|325481352|gb|EGC84393.1| iron-only hydrogenase maturation rSAM protein HydG [Anaerococcus hydrogenalis ACS-025-V-Sch4] Length = 474 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 6/121 (4%) Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCF 113 Q + ++ +L + ED + + S K + + Y +RI+L + C C +C Sbjct: 48 QGLSHRDAFVLLSCQEED-LNEEIFSLAKKLKEKFYGNRIVLFAPLYLSNYCVNGCLYCP 106 Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173 + LS + + +Q+ + TG DP+ + + + +KT+ IK Sbjct: 107 YHAKNKTIPRRKLSQDEIRKEVIALQDLGHKRLALETGEDPVNNPIEYVLESIKTIYSIK 166 Query: 174 H 174 H Sbjct: 167 H 167 >gi|322382952|ref|ZP_08056784.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153072|gb|EFX45530.1| coproporphyrinogen III oxidase-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 510 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 35/186 (18%), Positives = 69/186 (37%), Gaps = 25/186 (13%) Query: 58 RQFIPQKEELNILP--EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FR 114 RQF+ ++ L P + D I + + + H + L + CP C +C F Sbjct: 138 RQFL-KEHYLVTRPKADLLMD-IAERQLKVIPDLFHLDHEVSLYIGIPFCPTKCAYCTFP 195 Query: 115 REMVGSQKGTVLS-----SKDTEAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKT 168 + G+V + ++ +++ I + + GG P L + + + +T Sbjct: 196 AYDIQGNNGSVHAFLEGLHEEIRLTGEWLKRHGMGITTIYWGGGTPTSLEAEDMDALFRT 255 Query: 169 ----LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEA 223 L + V+ L V P I P+ ++ +K + I P F++ Sbjct: 256 MQKHLPQMDKVRELT----VEAGRPDTITPDKLEVMKRWDVDRISIN-----PQSFTQLT 306 Query: 224 IAAISR 229 + I R Sbjct: 307 LDTIGR 312 >gi|312898407|ref|ZP_07757797.1| radical SAM domain protein [Megasphaera micronuciformis F0359] gi|310620326|gb|EFQ03896.1| radical SAM domain protein [Megasphaera micronuciformis F0359] Length = 217 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 6/82 (7%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L C + C +C ++ + + + Y + + ++ TGG+PL+ Sbjct: 21 ALFIRFQGCNLSCTYCDTAW--ANEADCPYEEESPQEIVDY-ACREGVTDITLTGGEPLL 77 Query: 157 LSHKRLQKVLKTLRYIK-HVQI 177 + + +++ L HV+I Sbjct: 78 --QEGIDELIDLLSKHGFHVEI 97 >gi|289523143|ref|ZP_06439997.1| glutamate 5-kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503686|gb|EFD24850.1| glutamate 5-kinase [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 329 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 34/181 (18%), Positives = 58/181 (32%), Gaps = 42/181 (23%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L C + C FC + LS D L+ +++ + + V FT +PLI Sbjct: 73 VLSLGSVGCNMRCPFCQNWHISTWSPQIKLSRIDPLELLSLVKKYN-VTAVAFTYNEPLI 131 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-----QRINPELIQC------------ 199 L+ + L ++V+++ + + P RI+ + Sbjct: 132 SYEYLLEAI--PLLKKENVKVVLVTNGLINTLPLKEIAHRIDAANVDLKTFNEETYKKLG 189 Query: 200 --LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 LK K + I N E + L+ GINDD L Sbjct: 190 GDLKTVLKTLQILKSFNVHIEITHL--------------------LVTGINDDLGEFEAL 229 Query: 258 M 258 Sbjct: 230 C 230 >gi|257064347|ref|YP_003144019.1| iron-only hydrogenase maturation protein HydE [Slackia heliotrinireducens DSM 20476] gi|256792000|gb|ACV22670.1| iron-only hydrogenase maturation protein HydE [Slackia heliotrinireducens DSM 20476] Length = 351 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 36/158 (22%), Positives = 55/158 (34%), Gaps = 24/158 (15%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R L+++ + C C +C R S L+ A E V+ G DP Sbjct: 56 TRGLIEVSNFCKNDCLYCGIRRSNRSCHRYRLAVDQILACADVGYEVGFRTFVLQGGEDP 115 Query: 155 LILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + +R+ ++ L+ +H L R P E Q L+EAG Y+ Sbjct: 116 WF-TDERVCDCVRRLKQ-RHPDCAVTLSLGERSP---------ESYQALREAGADRYLLR 164 Query: 212 HAN---------HPYEFSEEAIAAI-SRLANAGIILLS 239 H HP + S +A A L AG + Sbjct: 165 HETATPGHYARLHPADMSWDARMACLYSLREAGFTVGC 202 >gi|225848259|ref|YP_002728422.1| molybdenum cofactor biosynthesis protein A [Sulfurihydrogenibium azorense Az-Fu1] gi|225643519|gb|ACN98569.1| molybdenum cofactor biosynthesis protein A [Sulfurihydrogenibium azorense Az-Fu1] Length = 321 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 36/80 (45%), Gaps = 3/80 (3%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C M +L ++ + + + + +V TGG+PL+ Sbjct: 8 ISVTDKCNLKCFYCRPDNMEFIPHDEILRYEEIAKLVKAMTKY-GLKKVRITGGEPLV-- 64 Query: 159 HKRLQKVLKTLRYIKHVQIL 178 +++ ++ L+ I ++ + Sbjct: 65 RPQIENLVSLLKSIPQIEDI 84 >gi|196234696|ref|ZP_03133509.1| molybdenum cofactor biosynthesis protein A [Chthoniobacter flavus Ellin428] gi|196221244|gb|EDY15801.1| molybdenum cofactor biosynthesis protein A [Chthoniobacter flavus Ellin428] Length = 337 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 31/169 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDP 154 + + C C +C +E+ G + + A LA I + ++ TGG+P Sbjct: 18 ISVTDRCNFRCTYCMPKEVFGHGYDFLPKEEVLTFEEIARLARIFVELGAEKLRLTGGEP 77 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF---HSRVP--------IVDPQRIN---PELIQCL 200 L + L +++ L I+ V L SR+ QR+ L Sbjct: 78 -TLR-RELHRLVSELAAIRGVHDLTLTTNGSRLVEEARNLRNAGL-QRLTVSVDALDDVT 134 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG-IILLSQSVLLKGIN 248 A V +H + I AG + V+ +G+N Sbjct: 135 FRAMNDVSFPVH---------RVLRGIEAAREAGFAPIKINMVVKRGVN 174 >gi|187939873|gb|ACD39011.1| helicase-related protein [Pseudomonas aeruginosa] Length = 1126 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 4/47 (8%) Query: 220 SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 S +I R+ AG +Q+VL +G ND L+ L + L I Sbjct: 540 SAALAESIERMRAAGFSYRNQAVLCRG-ND---KLSELGQELERLGI 582 >gi|218782637|ref|YP_002433955.1| radical SAM domain protein [Desulfatibacillum alkenivorans AK-01] gi|218764021|gb|ACL06487.1| Radical SAM domain protein [Desulfatibacillum alkenivorans AK-01] Length = 353 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 32/147 (21%), Positives = 60/147 (40%), Gaps = 20/147 (13%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVL--SSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + CP C FC +R + G+ + + + E L++ ++ + F GG+ L Sbjct: 12 IFLPHAGCPHQCVFCNQRAITGAARPFSAEDARAEVERYLSFPRKSKGPTIISFYGGNFL 71 Query: 156 ILSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211 +S KR++ +L + V +RF +R P ++P + L+ K V + + Sbjct: 72 GISRKRIRDLLDLASQYVNQGRVDGIRFSTR-----PDTVSPLSLSLLEGYPVKTVELGV 126 Query: 212 HANHPYEFSEEAIAAISRLANAGIILL 238 EE + A R G +L Sbjct: 127 -----QSMDEEVLEASRR----GHTVL 144 >gi|124486075|ref|YP_001030691.1| GTP cyclohydrolase subunit MoaA [Methanocorpusculum labreanum Z] gi|124363616|gb|ABN07424.1| GTP cyclohydrolase subunit MoaA [Methanocorpusculum labreanum Z] Length = 319 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 28/169 (16%), Positives = 62/169 (36%), Gaps = 31/169 (18%) Query: 99 LKLLHVCPVYCRFCFRREM-----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C + C +C R + ++ ++ + E + + TGG+ Sbjct: 24 IAVTSACDLRCIYCHREGEGDNGCTRDDHASQMTKEEISELIGVFAE-LGVKTIKLTGGE 82 Query: 154 PLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 PL+ +L +R I H++ + + +L + LK+AG + + Sbjct: 83 PLLRPD-----LLDIIRSIPPHIE------SSLTTNGTHL-AKLAKELKDAGLS-RVNVS 129 Query: 213 ANHPYE-----FSE-----EAIAAISRLANAGI-ILLSQSVLLKGINDD 250 + + + + I AG+ + V+LKG+ND+ Sbjct: 130 LDTMNRDTYIKITGKDRLKDVLDGIDAALAAGLTPVKLNMVVLKGMNDN 178 >gi|26988695|ref|NP_744120.1| molybdenum cofactor biosynthesis protein A, putative [Pseudomonas putida KT2440] gi|24983483|gb|AAN67584.1|AE016388_4 molybdenum cofactor biosynthesis protein A, putative [Pseudomonas putida KT2440] Length = 337 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 6/77 (7%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C +C + +V +Q LS+ +AY+ E + I + TGG+PL+ Sbjct: 30 VSLTAACNYACTYCVPDGKRLVAAQDE--LSADALARGVAYLIEAAGIERLRITGGEPLV 87 Query: 157 LSHKRLQKVLKTLRYIK 173 RL + + + Sbjct: 88 SP--RLDAFMAAVAKLD 102 >gi|189500687|ref|YP_001960157.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium phaeobacteroides BS1] gi|189496128|gb|ACE04676.1| nitrogenase cofactor biosynthesis protein NifB [Chlorobium phaeobacteroides BS1] Length = 424 Score = 38.9 bits (90), Expect = 1.2, Method: Composition-based stats. Identities = 37/190 (19%), Positives = 64/190 (33%), Gaps = 46/190 (24%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQE----KSQIWEVI 148 RI L + C + C +C R+ ++ ++S+ AL Y+ + I V Sbjct: 20 GRIHLPVAPKCNIQCNYCNRKFDCLNENRPGVTSRVLSPHQALHYLDQALELSPNIAVVG 79 Query: 149 FTG-GDPL-----ILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 G GDP ++ RL +K + L + S V P E + L Sbjct: 80 IAGPGDPFANPEETMTTLRLVREKYPEMLLCV--------ASNGLNVLPY---IEELAEL 128 Query: 201 KEAGKPVYIAI-----------HANHPYEFSEEAI----------AAISRLANAGIILLS 239 K + + I H + + A+ +L G+ Sbjct: 129 KVSHVTLTINAIDPEIGAEIYAWVRHGKKVFRDVAGAELLLKNQLEALKKLKELGVTAKV 188 Query: 240 QSVLLKGIND 249 S+++ GIND Sbjct: 189 NSIIIPGIND 198 >gi|187734933|ref|YP_001877045.1| radical SAM enzyme, Cfr family [Akkermansia muciniphila ATCC BAA-835] gi|205829710|sp|B2UNF2|RLMN_AKKM8 RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|187424985|gb|ACD04264.1| radical SAM enzyme, Cfr family [Akkermansia muciniphila ATCC BAA-835] Length = 359 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 37/211 (17%), Positives = 74/211 (35%), Gaps = 53/211 (25%) Query: 93 YPDRILLKLLHV--CPVYCRFC------FRREMVGSQK-GTVLSSKDTEAALAYIQEKSQ 143 +R+ L + C C+FC +R + + G +LS++ + Sbjct: 107 KSERVTLCVSSQVGCAFGCKFCASGLLGLKRHLTTGEIIGQILSAEAI--------AGKR 158 Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + ++F G G+PL + L I + L +R + P L + L Sbjct: 159 VNNIVFMGMGEPL----SNFDNLADALEIITSHRGLEIGARHITISTSGFVPGL-KKLAA 213 Query: 203 AGKPV--YIAIHANHPYEFSEEAIAAISRLANAGIIL-------------LSQSV----- 242 + + +++H ++E I N L +Q Sbjct: 214 YPRQIRLAVSLHG-----ATDEVRDQIMP-VNKKWPLSQLIPALEEWNRGRNQMPTLEYI 267 Query: 243 LLKGINDDPEILANLMR---TFV-ELRIKPY 269 L++ IND P+ ++L+R ++ + PY Sbjct: 268 LIRDINDSPKDASHLVRIAKRLHAKVNLIPY 298 >gi|329907318|ref|ZP_08274630.1| Molybdenum cofactor biosynthesis protein A [Oxalobacteraceae bacterium IMCC9480] gi|327547006|gb|EGF31898.1| Molybdenum cofactor biosynthesis protein A [Oxalobacteraceae bacterium IMCC9480] Length = 371 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 36/80 (45%), Gaps = 8/80 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ + +LS ++ + I ++ TGG+ Sbjct: 44 ISVTDRCNFRCVYCMPKELFDKDYQFLPQTALLSFEEITRMARIFIDH-GIEKIRLTGGE 102 Query: 154 PLILSHKRLQKVLKTLRYIK 173 PL+ K L+K+++ L +K Sbjct: 103 PLL--RKHLEKLIEMLSRLK 120 >gi|312128061|ref|YP_003992935.1| molybdenum cofactor biosynthesis protein a [Caldicellulosiruptor hydrothermalis 108] gi|311778080|gb|ADQ07566.1| molybdenum cofactor biosynthesis protein A [Caldicellulosiruptor hydrothermalis 108] Length = 308 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 24/166 (14%), Positives = 67/166 (40%), Gaps = 19/166 (11%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R D + L + C +C +C +++ + LS ++ ++ ++ I ++ T Sbjct: 6 SRKIDYLRLSVTDRCNFFCMYCRTKDLYYERIDQ-LSKEEIFRIISAFKK-LGIQKLRIT 63 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P + + ++++ I ++ + + ++ + +K K V I+ Sbjct: 64 GGEPFLRDD--IFEIIEFAHSIG-IENINITT---NGW--LDTEKIKKVIKSPLKSVNIS 115 Query: 211 IHA---NHPYEFSE-----EAIAAISRLANAGIILLSQSVLLKGIN 248 + + + + AI L + ++ +VL++ +N Sbjct: 116 LDTLDKEKYRSVTGIDGLDKVLTAIDELREHKRVKIN-TVLIRSVN 160 >gi|312885416|ref|ZP_07745057.1| Radical SAM domain protein [Mucilaginibacter paludis DSM 18603] gi|311302114|gb|EFQ79142.1| Radical SAM domain protein [Mucilaginibacter paludis DSM 18603] Length = 317 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 67/164 (40%), Gaps = 22/164 (13%) Query: 99 LKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + LL C + C +C E+ + +++ E +A + + + + TGG+PL Sbjct: 17 VSLLSTCNLGCIYCTMGSEDEIAYDHRPQTPAARFIE-LIAAVHAHTGLKTIRLTGGEPL 75 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHAN 214 + + L+ V+ ++ + + +R S + + L++AG V +++ A Sbjct: 76 LY--RELEAVISGIKALG-ITDIRMTSNAF------LLERSAEKLQQAGLRSVNVSLDAM 126 Query: 215 HPYEFSEEAIAA--------ISRLANAGIILLSQSVLLKGINDD 250 F I +AG+ + SV+++G N D Sbjct: 127 DANTFFAMTRRKQLPRTLQGIEAAIDAGLEVKINSVIMRGKNHD 170 >gi|119356660|ref|YP_911304.1| radical SAM domain-containing protein [Chlorobium phaeobacteroides DSM 266] gi|119354009|gb|ABL64880.1| Radical SAM domain protein [Chlorobium phaeobacteroides DSM 266] Length = 351 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 8/88 (9%) Query: 88 GIVHRYPD-RILLKL--LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 G+ H D +L++ + C + CR C G + ++S + + L ++ S I Sbjct: 42 GVAHLNRDATAILQVNTGYRCNLLCRHCHVDA--GPDRTEMMSRQTMQDCLNALK-NSSI 98 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYI 172 + TGG P + + L ++ R I Sbjct: 99 RTLDITGGAPEM--NPELPWFIREARKI 124 >gi|330466391|ref|YP_004404134.1| MiaB-like tRNA modifying protein ylig [Verrucosispora maris AB-18-032] gi|328809362|gb|AEB43534.1| miab-like tRNA modifying enzyme ylig [Verrucosispora maris AB-18-032] Length = 492 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 50/158 (31%), Gaps = 43/158 (27%) Query: 99 LKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT---- 150 LKL C C FC FR V +L+ + A KS + E++ Sbjct: 184 LKLASGCDRRCAFCAIPAFRGAFVSRTPDELLAEAEWLA-------KSGVRELVLVSENS 236 Query: 151 ---GGDPLILSHKRLQKVLKTLRYIKHVQILR----------------FHSRVPIVDP-- 189 G D + + L+K+L L I + +R + P V P Sbjct: 237 TSYGKD--LGDPRALEKLLPQLAAIDGIVRVRASYLQPAETRPGLIEAIAT-TPGVAPYF 293 Query: 190 ----QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA 223 Q + +++ ++ G E +A Sbjct: 294 DLSFQHSSEPVLRRMRRFGSTDRFLELLASARELDPQA 331 >gi|304406644|ref|ZP_07388299.1| Radical SAM domain protein [Paenibacillus curdlanolyticus YK9] gi|304344177|gb|EFM10016.1| Radical SAM domain protein [Paenibacillus curdlanolyticus YK9] Length = 378 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 9/77 (11%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGG---D-PL 155 +VC VYCRFC GS++G VL + E + IQE + E++ GG D P Sbjct: 62 TNVCDVYCRFCAFYRAPGSKEGYVLPN---ETIMQKIQETVDVGGTEILMQGGTNPDLPF 118 Query: 156 ILSHKRLQKVLKTLRYI 172 L+++ + I Sbjct: 119 SYYTDVLREIKQRFPQI 135 >gi|289524370|ref|ZP_06441224.1| molybdopterin-based tungsten cofactor biosynthesis protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289502389|gb|EFD23553.1| molybdopterin-based tungsten cofactor biosynthesis protein [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 439 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 +++++ C + C CF G + D L ++ K+ + F+GG+P Sbjct: 89 TVVVEVTEKCQLKCPVCFASAGEGFEPDFH----DLAKLLHDVRHKASNAILQFSGGEP- 143 Query: 156 ILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 + + L +Q+ R +P Q LK++G ++ + Sbjct: 144 TIRDDLFDLI--RLASNLKFPGIQLNTNGLR-LAQEP-----GYAQKLKKSGLN-WVFLQ 194 Query: 213 ANHPYEFS----------EEAIAAISRLANAGIILLSQSVLLKGINDD 250 + E + E + AI+ AG+ ++ L KGIND+ Sbjct: 195 FDGLRETTYRALRGRPLLSEKVRAINACQEAGLGVVLVPTLTKGINDN 242 >gi|154498439|ref|ZP_02036817.1| hypothetical protein BACCAP_02428 [Bacteroides capillosus ATCC 29799] gi|150272507|gb|EDM99692.1| hypothetical protein BACCAP_02428 [Bacteroides capillosus ATCC 29799] Length = 449 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 46/262 (17%), Positives = 89/262 (33%), Gaps = 72/262 (27%) Query: 60 FIPQKEELNILPEEREDPIGDNNHSPLKG--IVHRYPDRILLKLLHVCPVYCRFCFRREM 117 +P E +++ ++ GD +H+ G +V LK+ C C +C + Sbjct: 117 IVPAVE--SVMEGDQPTFFGDIDHTVEDGARMVSTPAYTAYLKIAEGCDNRCSYCIIPYL 174 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 G + + + A + + E+I D I Sbjct: 175 RGRYRSRTM--ESLLAEAKEL-ADRGVKEIIVIAQD-----------------------I 208 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISR----LANA 233 R+ + + +R+ EL++ L + ++ +H +P E ++ I I+ L Sbjct: 209 TRYGTDL---YKKRMLGELLKELCKLPFH-WVRLHYLYPDELDDDLIDVIASEPKILKYI 264 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI 293 I L+ IND ++L ++ R GT E + Sbjct: 265 DIP-------LQHIND--KLLRSMNRR------------------GTK------AEILAL 291 Query: 294 VASLKEKISGL-CQPFYILDLP 314 + L+ +I GL + I LP Sbjct: 292 LDKLRARIPGLVLRTSLIAGLP 313 >gi|121078489|gb|ABM47405.1| Fe-Mo cofactor biosynthesis protein [Rhizobium leguminosarum bv. trifolii] Length = 495 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 35/193 (18%), Positives = 62/193 (32%), Gaps = 42/193 (21%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H Y R+ L + C + C +C R+ G + + A+A E Q Sbjct: 59 AHLYFARMHLAVAPACNIQCNYCNRKYDCANESRPGVASHRLTPDQALRRAMAVANEVPQ 118 Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + V G GD ++ + L + R I V++ + P+ + EL+ Sbjct: 119 LSVVGIAGPGDA-CYDWRKTKATLIPIAREIPDVKLC-ISTNGLA-LPEHV-DELVDMNV 174 Query: 202 EAGKPVYIAI-----------------HAN--------HPYEFSEEAIAAISRLANAGII 236 + N H + + LA GI+ Sbjct: 175 GHVTITINMVDPKIGTKIYPWIFYDGRRYNGIDASRILHERQMLG-----LEMLAERGIL 229 Query: 237 LLSQSVLLKGIND 249 + SV++ G+ND Sbjct: 230 IKVNSVMIPGVND 242 >gi|325959672|ref|YP_004291138.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21] gi|325331104|gb|ADZ10166.1| Radical SAM domain protein [Methanobacterium sp. AL-21] Length = 500 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 43/169 (25%), Positives = 67/169 (39%), Gaps = 28/169 (16%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPL 155 L+ + + C + C CF V S+K S ++ L ++ + + + GG+P Sbjct: 97 LIDVTNRCNLKCPVCFANAAV-SKKLYEPSYEEIRTMLRNLRNNRPVPTPAIQYAGGEPT 155 Query: 156 ILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + L ++K H QI R+ R+ P L Q LK+AG + + Sbjct: 156 VRKD--LVDLIKLAKEEGFSHTQIATNGVRL-----ARL-PSLAQELKDAGLNT-VYLQF 206 Query: 214 NHPYE----------FSEEAIAAISRLANA--GIILLSQSVLLKGINDD 250 + E I AI A GI+L+ LLKGINDD Sbjct: 207 DGVTEEPYLEIRQKDLLATKIKAIENCRKANLGIVLV--PTLLKGINDD 253 >gi|310779821|ref|YP_003968153.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926] gi|309749144|gb|ADO83805.1| Radical SAM domain protein [Ilyobacter polytropus DSM 2926] Length = 306 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 47/108 (43%), Gaps = 13/108 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156 L L C C +C++ G++K + + + I+ + + + GG+P Sbjct: 10 LILTMECNANCDYCYQN---GAEKVPDMDEEFIDKLYEKIKSEEYYNKFVIALFGGEP-T 65 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEA 203 L+ ++ +L+ L +K ++ RF P I+ + + +K+A Sbjct: 66 LAEDKILYLLEKLENLKDSKVFRF------TMPTNAIDTDAVLRIKKA 107 >gi|307594418|ref|YP_003900735.1| Radical SAM domain-containing protein [Vulcanisaeta distributa DSM 14429] gi|307549619|gb|ADN49684.1| Radical SAM domain protein [Vulcanisaeta distributa DSM 14429] Length = 366 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 45/250 (18%), Positives = 78/250 (31%), Gaps = 69/250 (27%) Query: 84 SPLKGIVHRYPDRI-------LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 S + + +Y + +L +VC + CRFC + G + LS ++ +A Sbjct: 40 SAAEYLTRKYFGNVVTFIPNMILNYTNVCVIACRFCAFYRLPGHPEAYTLSVEEAVRRVA 99 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196 I + I +V+ GG + I+ L Sbjct: 100 AIDREFGIRQVLVQGG-------------INPELDIE------------------YYEGL 128 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAA-------ISRLANAGIILLSQS---VLLKG 246 + LK V I H P E A + RL AG+ L+ +L+ Sbjct: 129 FKALKAKLPHVAI--HGLSPIEVDYLARKHRMSYAEVLDRLRGAGMDTLAGGGGEILVDR 186 Query: 247 IND-------DPEILANLMRTFVELRIK----PYYLHHPDLAAGTSHFRLTIEEGQKIVA 295 + D + N+M T + I Y H ++ H +I+ Sbjct: 187 VRRAIAPHKIDADTWLNIMETAHRMGIMSNATMMYGHVETMSDWAEHL-------YRIIE 239 Query: 296 SLKEKISGLC 305 L+ + G Sbjct: 240 -LQRRTHGFL 248 >gi|317056337|ref|YP_004104804.1| Coproporphyrinogen dehydrogenase [Ruminococcus albus 7] gi|315448606|gb|ADU22170.1| Coproporphyrinogen dehydrogenase [Ruminococcus albus 7] Length = 489 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 26/146 (17%) Query: 98 LLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWE--------V 147 L + CP C +C + G L + + I+ + I + V Sbjct: 168 LYVSIPFCPTRCSYCS---FISQTLDSGRKLIPEYIDKMCREIRHTALITKRLGLKLDTV 224 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG P + +L ++K I+H + +R ++ V P I E ++ +K G Sbjct: 225 YFGGGTPTSIEASQLAALMK---CIEHSFDMSSVREYT-VEAGRPDTITEEKLRTIKANG 280 Query: 205 -KPVYIAIHANHPYEFSEEAIAAISR 229 + I P + + + AI R Sbjct: 281 CTRISIN-----PQSLNPDVLEAIGR 301 >gi|210630236|ref|ZP_03296326.1| hypothetical protein COLSTE_00210 [Collinsella stercoris DSM 13279] gi|210160562|gb|EEA91533.1| hypothetical protein COLSTE_00210 [Collinsella stercoris DSM 13279] Length = 272 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 39/206 (18%), Positives = 70/206 (33%), Gaps = 47/206 (22%) Query: 94 PDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWE---VI 148 P + CP+ C +C VGS GT ++ E + + + + Sbjct: 33 PGVRFVVFTQGCPMRCAYCHNPDTWAVGSGAGTSVT---VERIIDEFESNRPFYRTGGIT 89 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV-------DPQRINPELIQCLK 201 TGG+PL L + + + + + R H+ + P R + + L Sbjct: 90 VTGGEPL-LQPEFVGDLFAAMHANPNG---RVHTCLDSCGYAYNPKKPARFD----KVLA 141 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISR------------LANAGIILLSQSVLLKGIND 249 + + H+ E A++R LA G+ ++ + V++ GI D Sbjct: 142 QTDLVLLDIKHS------DPEGHKALTRCAPDNILAFGDELARRGVKVVIRHVIVPGITD 195 Query: 250 DPEILANL------MRTFVELRIKPY 269 E L V L + PY Sbjct: 196 TEEECEALGRLIAPWHNVVGLEMLPY 221 >gi|196230119|ref|ZP_03128982.1| coenzyme PQQ biosynthesis protein E [Chthoniobacter flavus Ellin428] gi|196225716|gb|EDY20223.1| coenzyme PQQ biosynthesis protein E [Chthoniobacter flavus Ellin428] Length = 334 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P +L ++ + CP++C +C M G L++ + + + + + F+GG+ Sbjct: 5 PYALLAEVTYRCPLHCPYCSNPAMYPG--GNELTTSEWQRVIDE-AAALGVLQAGFSGGE 61 Query: 154 PLILSHKRLQKVLKTLRY 171 PL+ L +++ R Sbjct: 62 PLLRPD--LAQLIAHARQ 77 >gi|126459299|ref|YP_001055577.1| radical SAM domain-containing protein [Pyrobaculum calidifontis JCM 11548] gi|126249020|gb|ABO08111.1| Radical SAM domain protein [Pyrobaculum calidifontis JCM 11548] Length = 294 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 32/177 (18%), Positives = 63/177 (35%), Gaps = 30/177 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLIL 157 L C C +C+ + + + E +++ + V + DP Sbjct: 25 LNPYTGCGHGCLYCYITSYIPNAFNPRPKERLMELVRRDLEKIPRGAVVALSNSSDPYTP 84 Query: 158 SHKRL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 +L +KVL+ L ++ + ++ P+V + L + + V + I Sbjct: 85 PEAQLGLTRKVLEAL--LERGYRVLITTKSPLVL------RDLDILAKHRERVAVQITIT 136 Query: 215 HPYE-----FSEEA------IAAISRLANAGIILLSQSV----LLKGINDDPEILAN 256 E A + A+ +LA AGI + +V L+ +NDD E + Sbjct: 137 TLREELAERLEPRAPRPRGRLDAVKKLAEAGIKV---TVRLDPLIPYLNDDEENIEE 190 >gi|91785150|ref|YP_560356.1| tRNA-i(6)A37modification enzyme MiaB [Burkholderia xenovorans LB400] gi|123168088|sp|Q13UD5|MIAB_BURXL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|91689104|gb|ABE32304.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia xenovorans LB400] Length = 457 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 26/138 (18%) Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143 H P R+ + ++ C YC +C V S+ + L I Sbjct: 138 HLPPARVDGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192 Query: 144 IWEVIFTGGD------PLILSHKRLQ---KVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 + EV G + L L + ++++ + I ++ +R+ + P+ Sbjct: 193 VREVTLLGQNVNAYRAGLTLGSTEIADFAQLIEYVADIPGIERIRYTTSH----PKEFTQ 248 Query: 195 ELIQCLKEAGKPVYIAIH 212 LI + K + +H Sbjct: 249 RLIDTYAKVPK-LVSHLH 265 >gi|86748084|ref|YP_484580.1| nitrogenase cofactor biosynthesis protein NifB [Rhodopseudomonas palustris HaA2] gi|86571112|gb|ABD05669.1| nitrogenase cofactor biosynthesis protein NifB [Rhodopseudomonas palustris HaA2] Length = 518 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 36/203 (17%), Positives = 62/203 (30%), Gaps = 60/203 (29%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H + R+ + + C + C +C R+ G + + +A Q Sbjct: 68 AHHHFARMHVAVAPACNIQCNYCNRKYDCANESRPGVVSEKLTPEQAARKVIAVASTIPQ 127 Query: 144 IWEVIFTG-GDPLILSHK------------------------RLQKVLKTLRYI--KHVQ 176 + + G GD L K L ++ + + HV Sbjct: 128 MTVLGIAGPGDALANPAKTFKTFELVTATAPDIKLCLSTNGLMLPDYVEQIAAMNVDHV- 186 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAI--------- 227 + I+PE+ G +Y I NH F+ + I Sbjct: 187 TITI---------NMIDPEI-------GAQIYPWIFYNH-RRFTGVEASKILSERQLLGL 229 Query: 228 SRLANAGIILLSQSVLLKGINDD 250 L GI++ SV++ GIND Sbjct: 230 EMLTARGILVKVNSVMIPGINDR 252 >gi|330990520|ref|ZP_08314478.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp. SXCC-1] gi|329762423|gb|EGG78909.1| Molybdenum cofactor biosynthesis protein A [Gluconacetobacter sp. SXCC-1] Length = 358 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 31/189 (16%), Positives = 68/189 (35%), Gaps = 26/189 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAYIQEKSQIWEVIFTGGDP 154 + ++ C C +C + + + + +A + + + ++ TGG+P Sbjct: 28 ISVMDRCNFRCPYCMPKATYHEGFRFLGPKERLDFDEIERVARMAAELGVTKIRLTGGEP 87 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSR---VPIVDP-------QRINPELIQCLKEAG 204 L+ L +++ L + ++ + + +P P QR+ L Sbjct: 88 LL--RPGLPDLVRRLGALPGIEDVALTTNGVLLPRFAPALRQAGLQRVTVSLD------S 139 Query: 205 KPVYIAIHANHPYEFSEEAIAAISRLANAGII--LLSQSVLLKGINDD--PEILANLMRT 260 + H + + I G + +V+ +G+ND P+ILA T Sbjct: 140 LDPAVFAHMSGGRGDLPAVLKGIDAACATGFEGGVKINTVVQRGVNDADVPDILARFRNT 199 Query: 261 FVELRIKPY 269 V +R+ Y Sbjct: 200 GVTVRLIEY 208 >gi|304440215|ref|ZP_07400105.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640] gi|304371264|gb|EFM24880.1| radical SAM domain protein [Peptoniphilus duerdenii ATCC BAA-1640] Length = 340 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 28/178 (15%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD-TEAALAYIQEKSQIWEVIFTGGDPLI 156 + CP C FC + ++ + T + K+ + L Y ++ I EV F GG Sbjct: 8 IFIPHLGCPHDCVFCNQNKIASTSIATKKTVKNTIDEYLDYFRKD-SIVEVAFYGG---S 63 Query: 157 LSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVY 208 + ++ + + + V +R +R P I+ +++ LK G V Sbjct: 64 FTAIPIEDQIN-FLSVANEYKKKNLVSFIRLSTR-----PDYIDENILEILKSNGVDTVE 117 Query: 209 IAIHANHPYEFSEE--------AIAAISRLANAGIIL-LSQSVLLKGINDDPEILANL 257 + + +++ ++ ++ L G + L Q V L ND+ E+ + Sbjct: 118 LGVQSSNQNVLNKSGRGHDFDCVKKSVKMLKKYGFNVGLQQMVGLPYSNDELEMQTAM 175 >gi|296158258|ref|ZP_06841090.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. Ch1-1] gi|295891594|gb|EFG71380.1| molybdenum cofactor biosynthesis protein A [Burkholderia sp. Ch1-1] Length = 369 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 15/79 (18%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F ++ +LS ++ E + ++ TGG+ Sbjct: 41 ISVTDRCNFRCVYCMPRSVFDKDYTFLPHSALLSFEEIERLARIFVAH-GVEKIRLTGGE 99 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K L+ ++ L ++ Sbjct: 100 PLL--RKNLEFLIDRLAHL 116 >gi|294338253|emb|CBJ94291.1| hypothetical phage protein (Radical SAM family) [Campylobacter phage CPt10] Length = 266 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 49/128 (38%), Gaps = 15/128 (11%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 I+L L+ C C +C V L+ + + I++ + + TGG+P Sbjct: 5 IVLNLIDYCGFNCEYCSSS-QVKKVNSNPLTKLNFLMLIKQIEKSLSRFIIKVTGGEP-T 62 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-H 215 L L+ ++ L +K++Q RV I L++ + + H Sbjct: 63 LHPNFLE-FIEKLNNVKNIQ------RVIIT-----TNGSCNNLEKLNNYKKVHTIISYH 110 Query: 216 PYEFSEEA 223 P + E++ Sbjct: 111 PNQIDEDS 118 >gi|170291214|ref|YP_001738030.1| radical SAM domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170175294|gb|ACB08347.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 334 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 S G++ R + I ++ CP+ C FC S+ D +++ + + Sbjct: 16 SVAFGLIDRGTNLIQVRPSSSCPLSCIFCSTDAGPKSRTRRTEFLVDLNYIISWFERLVE 75 Query: 144 ------IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 I I T GDP + ++ ++K LR I V+++ + P+ Sbjct: 76 SKGISDIEAHIDTVGDPFLYP--KIVDLVKRLRDIPEVKVISAQTHGPL 122 >gi|91794426|ref|YP_564077.1| radical SAM family protein [Shewanella denitrificans OS217] gi|91716428|gb|ABE56354.1| Radical SAM [Shewanella denitrificans OS217] Length = 292 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 43/111 (38%), Gaps = 9/111 (8%) Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 ++L++ + C C FC Q K + L I V GD + Sbjct: 18 LILQVTNGCSWNNCSFCDMYTQPQKQFRAQKLDKIEQDILNAAASGYPISRVFLADGDAM 77 Query: 156 ILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIV-DPQRINPELIQCLKEAG 204 L KRL+++ + + ++ V +R+ P+ + + ++ LKE Sbjct: 78 SLPFKRLKEICELINTHLPSV------TRISSYCLPRNLTNKTVEQLKELR 122 >gi|77919684|ref|YP_357499.1| putative methyltransferase [Pelobacter carbinolicus DSM 2380] gi|77545767|gb|ABA89329.1| putative methyltransferase [Pelobacter carbinolicus DSM 2380] Length = 1014 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 32/105 (30%), Gaps = 9/105 (8%) Query: 78 IGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 + + + G H L + + C + CR C + Sbjct: 60 LPQGDAAVYPGRSHFLKTESLRELWFHITNRCNMNCRHCM---FGSGPGDAAELDAERIV 116 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 LA TGG+PL+ +R + + L + +++ Sbjct: 117 TLARQASNLGCRVFALTGGEPLVH--RRFDYIARELLALPDSRLV 159 >gi|21242671|ref|NP_642253.1| Fe-S oxidoreductase [Xanthomonas axonopodis pv. citri str. 306] gi|21108142|gb|AAM36789.1| Fe-S oxidoreductase [Xanthomonas axonopodis pv. citri str. 306] Length = 392 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 26/122 (21%), Positives = 50/122 (40%), Gaps = 16/122 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD----TEAALAYIQEKSQIWEVIF 149 P +LLKL C + C +C ++ + LA + E+ + + F Sbjct: 20 PTAVLLKLTGTCNIDCDYC------YDYDAERFRAQQSLGTIQTTLAPLLERGEPLSIAF 73 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GG+PL L +++V++ L H R + R PE++ L++ V + Sbjct: 74 HGGEPL-LRFGLIRQVVQWLE--PH--RARVGF-SLQTNGTRFTPEILDFLEQHDFSVGL 127 Query: 210 AI 211 ++ Sbjct: 128 SL 129 >gi|291087012|ref|ZP_06345142.2| radical SAM domain protein [Clostridium sp. M62/1] gi|291076635|gb|EFE13999.1| radical SAM domain protein [Clostridium sp. M62/1] Length = 462 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + CR+CF E + +++ + + AL ++ S EV F GG+PL Sbjct: 97 LHIAHDCNLACRYCFAEEGEYHGRRALMTYEVGKKALDFLVANSGNRINLEVDFFGGEPL 156 Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRF 180 + K+L ++L H + RF Sbjct: 157 MNWDVVKQLVAYGRSLEK-PHNKKFRF 182 >gi|222445142|ref|ZP_03607657.1| hypothetical protein METSMIALI_00763 [Methanobrevibacter smithii DSM 2375] gi|222434707|gb|EEE41872.1| hypothetical protein METSMIALI_00763 [Methanobrevibacter smithii DSM 2375] Length = 498 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 30/169 (17%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDP 154 L+ + + C + C CF V + + + L ++ + + GG+P Sbjct: 89 LIDVTNRCNLRCPVCFANAAVSG-RLYEPTQDEIREMLRNLRNLKPHPTP-AIQYAGGEP 146 Query: 155 LILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----- 207 + L +++ HVQI R+ R + LK+AG Sbjct: 147 TVRKD--LVELVAMAKEEGFTHVQIATNGLRL-----AR-KENFAKELKDAGLNTVYLAF 198 Query: 208 -------YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 YI N + I AI AG+ ++ L+KG+ND Sbjct: 199 DGVTPEPYIN---NRGKNLLPQKIQAIENCRKAGLGVVLVPTLIKGVND 244 >gi|153868712|ref|ZP_01998465.1| radical SAM family protein [Beggiatoa sp. PS] gi|152074705|gb|EDN71535.1| radical SAM family protein [Beggiatoa sp. PS] Length = 321 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 36/82 (43%), Gaps = 5/82 (6%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 D + + L ++C C C G + +++ + L Y++ I + FTGG P Sbjct: 22 DTLQVNLGYLCNQQCLHCHVNA--GPNRIEIMTRETCNQILDYLRATPSIQTLDFTGGAP 79 Query: 155 LILSHKRLQKVLKTLRYIK-HV 175 + + + ++T R + HV Sbjct: 80 EL--NPHFRYFVETARQLDVHV 99 >gi|148642909|ref|YP_001273422.1| molybdenum cofactor biosynthesis-related protein, MoaA [Methanobrevibacter smithii ATCC 35061] gi|148551926|gb|ABQ87054.1| molybdenum cofactor biosynthesis-related protein, MoaA [Methanobrevibacter smithii ATCC 35061] Length = 498 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 30/169 (17%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDP 154 L+ + + C + C CF V + + + L ++ + + GG+P Sbjct: 89 LIDVTNRCNLRCPVCFANAAVSG-RLYEPTQDEIREMLRNLRNLKPHPTP-AIQYAGGEP 146 Query: 155 LILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----- 207 + L +++ HVQI R+ R + LK+AG Sbjct: 147 TVRKD--LVELVAMAKEEGFTHVQIATNGLRL-----AR-KENFAKELKDAGLNTVYLAF 198 Query: 208 -------YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 YI N + I AI AG+ ++ L+KG+ND Sbjct: 199 DGVTPEPYIN---NRGKNLLPQKIQAIENCRKAGLGVVLVPTLIKGVND 244 >gi|18312034|ref|NP_558701.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str. IM2] gi|18159459|gb|AAL62883.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str. IM2] Length = 372 Score = 38.9 bits (90), Expect = 1.3, Method: Composition-based stats. Identities = 59/317 (18%), Positives = 104/317 (32%), Gaps = 84/317 (26%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-F 149 H P + + CP+ C+ C R + + L++++ + + + E ++ Sbjct: 12 HEAPLLVFWESTKACPLACKHC-RADAILKPLPGELTTQEGKRLIEQVAEFGDPKPLLII 70 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVY 208 TGGDPL+ S L +++ + V + S P V P +N E ++ +KE+G K + Sbjct: 71 TGGDPLMRSD--LFELIDYANSL-SVPV----SLAPAVSPN-LNTETLKLIKESGVKSIS 122 Query: 209 IA-------IHANHPYEFSE------EAIAAISRLANAGIILLSQSV------------- 242 I+ H E E + AI G+ + +V Sbjct: 123 ISLDGARPETH----DEIRGVPGSYKETVNAIKTAVELGVSVQVNTVVWRKSLAELPEVA 178 Query: 243 -LLKGINDDPEILANLM-----RTFVELRIKP--Y------------YLHHPDLAAGTSH 282 LLK N ++ R EL I P Y Y + Sbjct: 179 YLLK--NLGVKVWEVFFLIVTGRAKEELDITPEEYEAAVQFLVDVSTYGFQVRTVEAPFY 236 Query: 283 FRLTIE--EGQK----IVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYC 336 R +E +G++ + L E++ L G +D + Sbjct: 237 RRAKLERLKGREFGHPLYNQLVERLRNLM----------GPPVRAVDPTIVPTRDGFGII 286 Query: 337 ITDHHNIVH-----DYP 348 + VH YP Sbjct: 287 FIAYDGTVHPSGFLPYP 303 >gi|306819868|ref|ZP_07453522.1| PDZ domain protein [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304552115|gb|EFM40052.1| PDZ domain protein [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 441 Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 60/156 (38%), Gaps = 36/156 (23%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C C FCF ++ + T+ D ++ L+++Q + T + + Sbjct: 92 QTCRNKCIFCFIDQLPKGMRKTLYIKDD-DSRLSFLQGN----FITMT-----NMGDAEI 141 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 K++K +I V + H+ P + ++ LK + + Sbjct: 142 DKMIK--YHISPVN-ISVHTTNPTL--------RVKMLKNKN---------------AGD 175 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 + + RL+NA I + +Q VL+ +ND E+ L Sbjct: 176 ILDKMKRLSNANINMNAQIVLIPNVNDKEELENTLS 211 >gi|303235727|ref|ZP_07322334.1| ribosomal protein S12 methylthiotransferase RimO [Prevotella disiens FB035-09AN] gi|302484174|gb|EFL47162.1| ribosomal protein S12 methylthiotransferase RimO [Prevotella disiens FB035-09AN] Length = 433 Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 44/118 (37%), Gaps = 17/118 (14%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW--- 145 H Y +K+ C +C +C + G K +D +A + + Sbjct: 135 HHY---AYIKIAEGCDRHCAYCAIPLITG--KHRSRKMEDILKEVAELAAAGTKEFQVIE 189 Query: 146 -EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 E+ + G D + + +++ + I V+ +R H P P +L+ ++E Sbjct: 190 QELTYYGVD--LDGKHHITELISRMADIPGVEWIRLHYAYPNQFPM----DLLDVMRE 241 >gi|261879550|ref|ZP_06005977.1| MiaB family RNA modification enzyme [Prevotella bergensis DSM 17361] gi|270333776|gb|EFA44562.1| MiaB family RNA modification enzyme [Prevotella bergensis DSM 17361] Length = 443 Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 32/225 (14%), Positives = 71/225 (31%), Gaps = 67/225 (29%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFT--GG 152 +K+ C +C +C M G + ++ + +A ++ QI E T G Sbjct: 150 AYIKIAEGCDRHCAYCAIPLMTGRHTSRSMEDILEEVKQLVAEGVKEFQIIEQELTYYGV 209 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 D I R+ +++ + I V+ +R H P + EL+ ++E Sbjct: 210 D--IDGKPRIAELISRMADIPGVKWIRLH----YAYPNQFPLELLDVMREK--------- 254 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLH 272 + L+ I+D L R Sbjct: 255 --------PNVCKYLDIA-------------LQHISDHV-----LSRMLRH--------- 279 Query: 273 HPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316 ++ E +++ +++++ G+ + ++ PG Sbjct: 280 ------------VSKAETLELIRKIRQEVPGITLRTTLMVGFPGE 312 >gi|205374147|ref|ZP_03226947.1| RNA modification protein [Bacillus coahuilensis m4-4] Length = 430 Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 47/124 (37%), Gaps = 11/124 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150 R LK+ C +C FC G + + + + +I I T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPKEVIRQAQQLVD--AGYKEIVLTGIHT 199 Query: 151 GGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GG + L +L+ L +K ++ +R S ++ ++ E+++ + ++ V Sbjct: 200 GGYGEDMKDYNLALLLRDLETQVKGLKRIRISS----IEASQLTDEVMEVIDQS-NMVVR 254 Query: 210 AIHA 213 +H Sbjct: 255 HLHI 258 >gi|149184079|ref|ZP_01862427.1| hypothetical protein BSG1_17550 [Bacillus sp. SG-1] gi|148848213|gb|EDL62515.1| hypothetical protein BSG1_17550 [Bacillus sp. SG-1] Length = 445 Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 19/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C FC G + + A + E++ T Sbjct: 145 RTRASLKIQEGCNNFCTFCIIPWARGLMRSREP-EEVIRQAQQLVDA--GYKEIVLTGIH 201 Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + L +L+ L + ++ +R S ++ ++ E+I+ + + Sbjct: 202 TGGYGED---MKDYNLAMLLRDLEEKVDGLKRIRISS----IEASQLTDEVIEVIDNSKL 254 Query: 206 PVYIAIHA 213 V +H Sbjct: 255 -VVRHLHI 261 >gi|94266923|ref|ZP_01290577.1| Radical SAM [delta proteobacterium MLMS-1] gi|93452399|gb|EAT03016.1| Radical SAM [delta proteobacterium MLMS-1] Length = 351 Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 36/216 (16%), Positives = 65/216 (30%), Gaps = 35/216 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + ++ C + C C + ++ + + L I +Q V+ +GG+ Sbjct: 5 PKWLAWEITRRCNLNCVHCRSSSELEAKGHPDFDFTEAKRILDDITSYAQP-VVVLSGGE 63 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA--- 210 PL L + + LR + + E+ + LKE G + Sbjct: 64 PL-LRDDVFD-----IAAYGTEKGLRMC---LATNGTLVTDEVCRRLKEVGIRMVSMSLD 114 Query: 211 -----IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 +H N P F I A I L S K D + L + Sbjct: 115 GADAKVHDNFRSQPGAFDG-TINATRLFREHEIPFLFNSSFTKRNQADIPRVYRLAKEL- 172 Query: 263 ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Y+ + G+ I++ L Sbjct: 173 --GATAWYMFM----------IVPTGRGEDILSELI 196 >gi|332300096|ref|YP_004442017.1| MiaB-like tRNA modifying enzyme [Porphyromonas asaccharolytica DSM 20707] gi|332177159|gb|AEE12849.1| MiaB-like tRNA modifying enzyme [Porphyromonas asaccharolytica DSM 20707] Length = 454 Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 15/124 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151 R LK+ C YC +C G S+ G++ S +A + E+I TG Sbjct: 165 RTRHFLKVQDGCNYYCTYCTIPAARGISRNGSIASLVAQAERVAELGG----KEIILTGV 220 Query: 152 --GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GD + + L ++L L + + R S ++P+ + PE+IQ + E + Sbjct: 221 NIGDFGRTTGETLLELLHQLTQVAGIARYRIGS----IEPELLTPEIIQFVAETAQ---F 273 Query: 210 AIHA 213 H Sbjct: 274 MPHF 277 >gi|294085380|ref|YP_003552140.1| MiaB-like tRNA modifying enzyme [Candidatus Puniceispirillum marinum IMCC1322] gi|292664955|gb|ADE40056.1| MiaB-like tRNA modifying enzyme [Candidatus Puniceispirillum marinum IMCC1322] Length = 439 Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 33/142 (23%), Positives = 54/142 (38%), Gaps = 22/142 (15%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ 139 + L G R L++ C C FC G+ + L + +AA A + Sbjct: 142 EMASHMLDGFQE--HTRAFLQIQQGCDHRCTFCIIPYGRGNNRSAGL-HQIIDAAQALV- 197 Query: 140 EKSQIWEVIFTGGDPLILSH-------KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQR 191 E++ TG D I S RL ++++ LR I + LR S +DP Sbjct: 198 -DGGACEIVLTGVD--ITSWGSDLAGRPRLGRLVRALLREIPALPRLRLSS----IDPAE 250 Query: 192 INPELIQCLKEAGKPVYIAIHA 213 + EL+ L + + + H Sbjct: 251 GDAELMAVLGDDDR---LMPHF 269 >gi|197303393|ref|ZP_03168432.1| hypothetical protein RUMLAC_02115 [Ruminococcus lactaris ATCC 29176] gi|197297391|gb|EDY31952.1| hypothetical protein RUMLAC_02115 [Ruminococcus lactaris ATCC 29176] Length = 490 Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 67/162 (41%), Gaps = 32/162 (19%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 Q + + I + D I + P++ +Y + + ++ C +C +C + G ++ Sbjct: 169 QSDRMVIDIWKDTDKIVE--DLPVE---RKYSFKSGVNIMFGCNNFCSYCIVPYVRGRER 223 Query: 123 GTVLSS--KDTEAALAYIQEKSQIWEVIFTGGD----------PLILSHKRLQKVLKTLR 170 + ++ E +A + EV+ G + P+ ++L+ + Sbjct: 224 SRDPKAIVREIERLVA-----DGVVEVMLLGQNVNSYGKNLEHPMTF-----AQLLQEIE 273 Query: 171 YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 I+ ++ +RF + P+ ++ ELI+ + + K + +H Sbjct: 274 KIEGLERIRFMTSH----PKDLSDELIEVMSRS-KKICRHLH 310 >gi|218782479|ref|YP_002433797.1| radical SAM enzyme, Cfr family [Desulfatibacillum alkenivorans AK-01] gi|218763863|gb|ACL06329.1| radical SAM enzyme, Cfr family [Desulfatibacillum alkenivorans AK-01] Length = 359 Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 46/220 (20%), Positives = 70/220 (31%), Gaps = 53/220 (24%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C + C+FC +S +L + SQI +V T DP L + Sbjct: 115 GCAMGCKFC------------CTASMGLTRSLQANEIISQIRDVQATMEDPEHLRNLVFM 162 Query: 164 KVLKTLRYIKHVQI-----------LRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIA 210 + + L +V+ LRF R + L+ + GK V +A Sbjct: 163 GMGEPLANWDNVKQAMDIITDNDWGLRFSGRRVTIS----TVGLVPKMAAVGKDTRVKLA 218 Query: 211 IHANHP-YEFS------------EEAIAAISRL-ANAGIILLSQSVLLKGINDDPEILAN 256 + N P E EE + A G + + VLLKG+ND P Sbjct: 219 VSLNAPDNEIRDQIMPVNKKHPIEELLQACKDFPLRPGRRVTFEYVLLKGVNDSPAHARK 278 Query: 257 LMRTFV----ELRIKPYYLHHPDLAAGTSHFRLTIEEGQK 292 L + ++ + PY S F E Sbjct: 279 LGKLLAHQPCKINLIPY------NPHENSPFERPDPEAVD 312 >gi|73668263|ref|YP_304278.1| Fe-S oxidoreductase [Methanosarcina barkeri str. Fusaro] gi|72395425|gb|AAZ69698.1| Fe-S oxidoreductase [Methanosarcina barkeri str. Fusaro] Length = 377 Score = 38.5 bits (89), Expect = 1.3, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 45/113 (39%), Gaps = 11/113 (9%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R +++ CP C++C + G + +++ + L +I Sbjct: 143 RAPIEISRGCPWGCKYCQTPRLFGREVRHRSVDSIVKNAGYYNDLRFIASN-----AFGY 197 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + +++K+L L + +I F + V P+ + E ++ +++ Sbjct: 198 GSDGIHPRFDKVEKLLSALHKLPDKKIF-FGTFPSEVRPEFVTDESVELVRKY 249 >gi|319902104|ref|YP_004161832.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides helcogenes P 36-108] gi|319417135|gb|ADV44246.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides helcogenes P 36-108] Length = 432 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G K ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--KHVSRPMEEILDEVKYLVAEGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + + L ++++ + I V+ +R H P P EL + ++E Sbjct: 196 GVD--LYKKQMLPELIEHISEIPGVEWIRLHYAYPAHFPM----ELFRVMRERSN 244 >gi|302671353|ref|YP_003831313.1| radical SAM domain-containing protein [Butyrivibrio proteoclasticus B316] gi|302395826|gb|ADL34731.1| radical SAM domain-containing protein [Butyrivibrio proteoclasticus B316] Length = 479 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 25/96 (26%), Positives = 51/96 (53%), Gaps = 10/96 (10%) Query: 94 PDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---E 146 D ++ L + H C + C++CF E + +++ + +AAL ++ + S E Sbjct: 114 RDTVIKALCLNIAHDCNLRCKYCFADEGEYHGRRALMTEEVGKAALDFLIKNSGNRRNLE 173 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYI--KHVQILRF 180 V F GG+PL ++ + ++K+++ R I +H + RF Sbjct: 174 VDFFGGEPL-MNWEVVKKIVEYGRSIEKEHNKNFRF 208 >gi|269929314|ref|YP_003321635.1| Radical SAM domain-containing protein [Sphaerobacter thermophilus DSM 20745] gi|269788671|gb|ACZ40813.1| Radical SAM domain protein [Sphaerobacter thermophilus DSM 20745] Length = 519 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 66/199 (33%), Gaps = 43/199 (21%) Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRIL---------LKLLHVCPVYCRFC 112 P +L+ LP P D P RY D L + CP +C +C Sbjct: 176 PDIRDLDALPF----PAWDLVDVP------RYRDIWLRRHGYFSMNMVTTRGCPFHCNWC 225 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 + + Q+ S ++ A L ++++ Q + F D + L LQ+ + Sbjct: 226 AKP--IWGQRYNARSPENVAAELKWLRDNYQPDHIWFV-DDIMGLKPGWLQRYADEVE-- 280 Query: 173 KHVQILRFHSRVPIVDPQRIN----PELIQCLKEAGKPVYIAIHANHPYEF--------- 219 R R P R++ + I+ L AG + + Sbjct: 281 ------RLGVRTPFKSLHRVDLLLRGDTIEALARAGAQIVWVGAESGSQRILDAMEKGTK 334 Query: 220 SEEAIAAISRLANAGIILL 238 E+ + RL AGI + Sbjct: 335 VEQIVEVARRLHAAGIQVG 353 >gi|34541783|ref|NP_906262.1| MiaB-like tRNA modifying enzyme [Porphyromonas gingivalis W83] gi|34398101|gb|AAQ67161.1| MiaB-like tRNA modifying enzyme [Porphyromonas gingivalis W83] Length = 444 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R LK+ C +C +C R +++ + AA + +I Sbjct: 150 RTRHFLKVQDGCDYHCSYCTIPKARGRSRNGSIESLVRQAEAVAA----EGGKEIVLTGV 205 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GD + + +L+ L ++ ++ R S ++P ++ ELI + + Sbjct: 206 NIGDFGRSTGETFLDLLRALDQVEGIERYRIGS----IEPNLLSDELID-FCASAHRIAP 260 Query: 210 AIH 212 H Sbjct: 261 HFH 263 >gi|56419305|ref|YP_146623.1| molybdopterin cofactor biosynthesis protein [Geobacillus kaustophilus HTA426] gi|56379147|dbj|BAD75055.1| molybdopterin cofactor biosynthesis protein [Geobacillus kaustophilus HTA426] Length = 341 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 18/85 (21%), Positives = 39/85 (45%), Gaps = 8/85 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 L ++ C C +C E+ G + +L+ ++ A LA + + ++ TGG+ Sbjct: 22 LSVIDQCNFRCVYCMPAEVFGPNFRFLAEDQLLTVEEM-ALLAECFVELGVEKIRLTGGE 80 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ L +++ L I ++ + Sbjct: 81 PLLRRD--LDALIERLSMIPGLRDV 103 >gi|313114955|ref|ZP_07800450.1| MiaB-like tRNA modifying enzyme [Faecalibacterium cf. prausnitzii KLE1255] gi|310622715|gb|EFQ06175.1| MiaB-like tRNA modifying enzyme [Faecalibacterium cf. prausnitzii KLE1255] Length = 431 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 41/119 (34%), Gaps = 18/119 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R +K+ C C +C G + A L + S EV+ + Sbjct: 141 HTRAFIKVEDGCNRQCAYCVIPRARGPVRSR--DEASILAELRQLAA-SGYREVVLSAIS 197 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L ++++ ++ +Q +R S +DP + PE I L K Sbjct: 198 LPSYGLDTGT----NLVELVEHCAQVEGIQRIRLGS----LDPDMLTPEFITRLAAVEK 248 >gi|310828943|ref|YP_003961300.1| thiamine biosynthesis protein ThiH [Eubacterium limosum KIST612] gi|308740677|gb|ADO38337.1| thiamine biosynthesis protein ThiH [Eubacterium limosum KIST612] Length = 472 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 25/107 (23%), Positives = 45/107 (42%), Gaps = 6/107 (5%) Query: 73 EREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 E ED + +S K I + Y +RI+ L L + C C +C + L+ Sbjct: 60 ELEDE-NEKMYSLAKKIKQKFYGNRIVMFAPLYLSNYCINGCVYCPYHRQNKHIRRKKLT 118 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 ++ + +Q+ + TG DP + + + +KT+ IKH Sbjct: 119 QEEIRDEVIALQDMGHKRLALETGEDPANNPIEYVLESIKTIYGIKH 165 >gi|306840468|ref|ZP_07473227.1| molybdenum cofactor biosynthesis protein A [Brucella sp. BO2] gi|306289483|gb|EFM60701.1| molybdenum cofactor biosynthesis protein A [Brucella sp. BO2] Length = 314 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 60/163 (36%), Gaps = 25/163 (15%) Query: 101 LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 + C C +C M K +L+ ++ + + E + ++ TGG+PL+ K Sbjct: 1 MTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV--RK 57 Query: 161 RLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 + ++ L + + + S++ R EL C + + +++ Sbjct: 58 NIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLDTL 109 Query: 215 HPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249 +P +F I AGI + +V LK ND Sbjct: 110 NPEKFRTITRWGDLSRVLEGIDAARKAGIHVKINAVALKDFND 152 >gi|306843858|ref|ZP_07476453.1| molybdenum cofactor biosynthesis protein A [Brucella sp. BO1] gi|306275613|gb|EFM57337.1| molybdenum cofactor biosynthesis protein A [Brucella sp. BO1] Length = 344 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K + ++ L + + + S++ R EL C + + +++ Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137 Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249 +P +F I AGI + +V LK ND Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAARKAGIHVKINAVALKDFND 182 >gi|298242300|ref|ZP_06966107.1| RNA modification enzyme, MiaB family [Ktedonobacter racemifer DSM 44963] gi|297555354|gb|EFH89218.1| RNA modification enzyme, MiaB family [Ktedonobacter racemifer DSM 44963] Length = 502 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 57/165 (34%), Gaps = 21/165 (12%) Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 R +P + P ER H P K + L ++ C C +C Sbjct: 174 RTVLPMA--ITPKPGERI------AHYPTKIEPKKASPTAWLPIVLGCNKVCTYCIVPYR 225 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT----GGDPLILSHKRLQKVLKTLRYIK 173 G ++ + EA L + ++ + T G D + + L ++ +L I Sbjct: 226 RGRERSRPIDELMIEARLLVEKGAKEVTLLGQTIESYGLD--LANQPNLADLMTSLSEID 283 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYIAIHANH 215 + +RF + P + +I+ + K + I + A H Sbjct: 284 GLDRIRFMTSYPRY----MTDSMIERMASLPKVCEHLNIPVQAGH 324 >gi|290955780|ref|YP_003486962.1| hypothetical protein SCAB_12261 [Streptomyces scabiei 87.22] gi|260645306|emb|CBG68392.1| putative hypothetical protein [Streptomyces scabiei 87.22] Length = 417 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 22/144 (15%) Query: 83 HSPLKGIV-HRYPDRILLKLLHVCPVYCRFCFRREMV---GSQKGTVLSSKDTEAALAYI 138 +P G Y + +LK+ C + C +C+ K ++ + E I Sbjct: 2 MTPAPGHQPQAYLRQFVLKVHSRCNLDCDYCYVYHSADTSWRDKPRLMDAAVAERVAGRI 61 Query: 139 QEKSQIWE-----VIFTGGDPLILSHKRLQKVLKTL------RYIKHVQILRFHSRVPIV 187 E + + ++ GG+PL+L +RL+++L L + +RF ++ V Sbjct: 62 AEHATAHDLPDVGIVLHGGEPLLLGARRLEELLGILGRCLAKAGVP----VRFSAQTNGV 117 Query: 188 DPQRINPELIQCLKEAGKPVYIAI 211 + P+++ L V +++ Sbjct: 118 L---LTPDILDVLLRHRVDVSVSL 138 >gi|156741565|ref|YP_001431694.1| radical SAM domain-containing protein [Roseiflexus castenholzii DSM 13941] gi|156232893|gb|ABU57676.1| Radical SAM domain protein [Roseiflexus castenholzii DSM 13941] Length = 364 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 41/111 (36%), Gaps = 18/111 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ----IWEVIFTGGDP 154 ++ C + CR C M + E ++ ++++ + ++I TGGDP Sbjct: 27 WEMTQACALACRHCRAEAMPQPHPLQLT----FEESVRFLRQIPDFGNPLPQLILTGGDP 82 Query: 155 LILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 L L ++ R + V I P P + ++ LK G Sbjct: 83 LARPD--LLDLIDAARALGVPVSI------TPSATPN-LTRAMLAALKAHG 124 >gi|160877069|ref|YP_001556385.1| radical SAM domain-containing protein [Shewanella baltica OS195] gi|160862591|gb|ABX51125.1| Radical SAM domain protein [Shewanella baltica OS195] gi|315269273|gb|ADT96126.1| Radical SAM domain protein [Shewanella baltica OS678] Length = 295 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 25/162 (15%) Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 ++L++ + C C FC K + LA Q + + V GD + Sbjct: 19 LILQVTNGCSWNLCSFCDMYTQPQKAFRAQKLDKVEQDILAVAQSGAPVSRVFLADGDAM 78 Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKPVYIA 210 L RL+ + + + R++ V +R+ P+ + PE + L+E G + Sbjct: 79 SLPFARLEAICELINRHLPQV------TRISSYCLPRNLNNKTPEQLARLRELGLSLLYV 132 Query: 211 IHANHPYEF---------SEEAIAAISRLANAG----IILLS 239 + E E ++AA+ ++ AG +++L+ Sbjct: 133 GCESGDDEVLAKIQKGETFESSLAALLKIRAAGMKSSVMILN 174 >gi|332528805|ref|ZP_08404782.1| molybdenum cofactor biosynthesis protein A [Hylemonella gracilis ATCC 19624] gi|332041871|gb|EGI78220.1| molybdenum cofactor biosynthesis protein A [Hylemonella gracilis ATCC 19624] Length = 367 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F ++ G +L+ ++ + ++ TGG+ Sbjct: 33 ISVTDRCNFRCSYCMPKEVFTKDYPYLPHGDLLTFEEIARLARAFVS-LGVRKIRLTGGE 91 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K ++ +++ L I Sbjct: 92 PLL--RKNIEALIEQLADI 108 >gi|170724452|ref|YP_001758478.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC 51908] gi|169809799|gb|ACA84383.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC 51908] Length = 328 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 35/166 (21%), Positives = 70/166 (42%), Gaps = 27/166 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPL 155 L + C C +C + ++ VLS ++ LA++ + + + ++ TGG+PL Sbjct: 17 LSVTDRCDFRCVYCMSEDPCFLERDQVLSLEE----LAWVGQAFTELGVKKIRLTGGEPL 72 Query: 156 ILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA 213 + + RL K+L L + + + SR+ + Q ++ +G + I++ Sbjct: 73 VRTDCDRLVKLLGELPGLTELSMTTNGSRL---------TKFAQKMRGSGLARLNISLDT 123 Query: 214 NHPYEFSEEAI--------AAISRLANAGI-ILLSQSVLLKGINDD 250 P F++ I AG + +V+L+G NDD Sbjct: 124 LKPELFTDLTRNGKLERVIQGIDAAKAAGFKRIKINAVILRGQNDD 169 >gi|71907628|ref|YP_285215.1| radical SAM:molybdenum cofactor synthesis C-terminal [Dechloromonas aromatica RCB] gi|71847249|gb|AAZ46745.1| GTP cyclohydrolase subunit MoaA [Dechloromonas aromatica RCB] Length = 357 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 32/176 (18%), Positives = 66/176 (37%), Gaps = 24/176 (13%) Query: 89 IVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 ++ +Y R + L + C C +C EM + V+S ++ + + Sbjct: 34 LLDKYGRRITYVRLSITDRCDFRCTYCMAEEMTFLPRKEVMSLEECLRVASVFVG-LGVT 92 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG- 204 ++ TGG+PL+ +++ L + ++ L V + ++ + L AG Sbjct: 93 KLRITGGEPLVRKGAM--WLIERLGALPGLENL-----VLTTNGSQL-DKFAAPLHAAGV 144 Query: 205 KPVYIAIHANHPYEFSEEAI--------AAISRLANAGI--ILLSQSVLLKGINDD 250 K + I++ F I G L+ +V+++G NDD Sbjct: 145 KRINISLDTLKADRFRAITRIGDLAKVLRGIEAARATGFRRTKLN-AVMMRGTNDD 199 >gi|254251467|ref|ZP_04944785.1| 2-methylthioadenine synthetase [Burkholderia dolosa AUO158] gi|124894076|gb|EAY67956.1| 2-methylthioadenine synthetase [Burkholderia dolosa AUO158] Length = 457 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 41/128 (32%), Gaps = 21/128 (16%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153 + ++ C YC +C V S+ + L I + EV G + Sbjct: 148 TAFVSIMEGCSKYCSYC-----VVPYTRGDEVSRPLDDVLTEIAGLADQGVREVTLLGQN 202 Query: 154 ------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 L + +++ + I ++ +R+ + P+ LI + Sbjct: 203 VNAYRGALTAGSSEIADFATLIEYVADIPGIERIRYTTSH----PKEFTQRLIDTYAKVP 258 Query: 205 KPVYIAIH 212 K + +H Sbjct: 259 K-LVNHLH 265 >gi|260893907|ref|YP_003240004.1| Radical SAM domain protein [Ammonifex degensii KC4] gi|260866048|gb|ACX53154.1| Radical SAM domain protein [Ammonifex degensii KC4] Length = 382 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 6/65 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDP 154 ++ C + CR C+ G G + + E A +IQ K+++ ++F+GG+P Sbjct: 31 VVWNSTRACNLRCRHCYASATPGPAPGEMTT----EEARRFIQGLAKTEVPVLLFSGGEP 86 Query: 155 LILSH 159 L+ Sbjct: 87 LLRPD 91 >gi|188585754|ref|YP_001917299.1| Radical SAM domain protein [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350441|gb|ACB84711.1| Radical SAM domain protein [Natranaerobius thermophilus JW/NM-WN-LF] Length = 327 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 18/132 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + C + C+ C+R G L++++ + L I+ + +IF+GG+PL Sbjct: 3 VSWNTTKSCHLNCKHCYRDA--GEADSRELTTEEGKKLLDEIK-TAGFKLIIFSGGEPLE 59 Query: 157 LSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213 + K++ + I LR + I ++ + LKEAG + I++ + Sbjct: 60 RQD--IYKLVSYAKKIG----LRPVLGTSG-----TTITRKVARKLKEAGAVRLGISLDS 108 Query: 214 NHPYEFSEEAIA 225 HP E ++ Sbjct: 109 VHP-EVHDDFRQ 119 >gi|333030363|ref|ZP_08458424.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides coprosuis DSM 18011] gi|332740960|gb|EGJ71442.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides coprosuis DSM 18011] Length = 431 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 14/112 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKSQI-WEVIFT 150 LK+ C C +C + G K +D + + +E I E+ + Sbjct: 137 AYLKISEGCDRTCSYCAIPIITG--KHVSRPMEDILDEVKLLVGQGVREFQVIAQELTYY 194 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 G D + +RL ++++ + I V+ +R H P P +L++ ++E Sbjct: 195 GVD--LYKKQRLPELIERMAAIPGVEWIRLHYAYPAHFPY----DLLRVMRE 240 >gi|322382440|ref|ZP_08056337.1| coenzyme PQQ synthesis-like protein [Paenibacillus larvae subsp. larvae B-3650] gi|321153584|gb|EFX45970.1| coenzyme PQQ synthesis-like protein [Paenibacillus larvae subsp. larvae B-3650] Length = 439 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149 Y + L + H C + C +CF + + ++S + + A+ Y+ E + +V F Sbjct: 68 YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDVDF 127 Query: 150 TGGDPLILSHKRLQKVLKTLRY 171 GG+PL+ K +++++ R Sbjct: 128 FGGEPLMA-WKVVKQIVAYARS 148 >gi|303231379|ref|ZP_07318113.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella atypica ACS-049-V-Sch6] gi|302513975|gb|EFL55983.1| iron-only hydrogenase maturation rSAM protein HydG [Veillonella atypica ACS-049-V-Sch6] Length = 268 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 7/88 (7%) Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y DRI+L + C C +C K L+ + + + ++ VI Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQEQIKEEVIALEAMGHKRIVI 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 +G DPL L +L++++ I ++ Sbjct: 140 ESGEDPLNNP---LDYILESIKTIYSIK 164 >gi|295687475|ref|YP_003591168.1| MiaB family RNA modification enzyme [Caulobacter segnis ATCC 21756] gi|295429378|gb|ADG08550.1| RNA modification enzyme, MiaB family [Caulobacter segnis ATCC 21756] Length = 448 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 15/121 (12%) Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + +E+ D + H + G+ L + C +C FC G + ++ Sbjct: 136 DFAADEKFDALPAERH--VTGVT------AFLTVQEGCDKFCTFCVVPYTRGGEWSRPVN 187 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH---KRLQKVLKTLRYIKHVQILRFHSRV 184 E A + EV G + + L K+++ L I + +R+ + Sbjct: 188 -DIVEEAKR--LADQGVREVTLLGQN-VNAYDGDGSTLAKLVRQLARIDGLDRIRYTTSH 243 Query: 185 P 185 P Sbjct: 244 P 244 >gi|167462543|ref|ZP_02327632.1| Radical SAM domain protein [Paenibacillus larvae subsp. larvae BRL-230010] Length = 422 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149 Y + L + H C + C +CF + + ++S + + A+ Y+ E + +V F Sbjct: 51 YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDVDF 110 Query: 150 TGGDPLILSHKRLQKVLKTLRY 171 GG+PL+ K +++++ R Sbjct: 111 FGGEPLMA-WKVVKQIVAYARS 131 >gi|90422778|ref|YP_531148.1| radical SAM family protein [Rhodopseudomonas palustris BisB18] gi|90104792|gb|ABD86829.1| Radical SAM [Rhodopseudomonas palustris BisB18] Length = 473 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 38/126 (30%), Gaps = 15/126 (11%) Query: 92 RYPDRILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEK-SQIW-- 145 P + + C + C +C+ G K + Y Sbjct: 87 LKPSAVYVNATERCNLNCTYCYIPADMRRDGIDMDGPTLLKALDTLDRYFSRHMPADRRP 146 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 ++IF G +PLI + + + K RF + + + + L G Sbjct: 147 QIIFHGAEPLIAR----EAIFAAIDAFK--DRFRFGLQTNATL---LTDKAAEFLTSRGV 197 Query: 206 PVYIAI 211 + +++ Sbjct: 198 GIGLSL 203 >gi|325919115|ref|ZP_08181174.1| GTP cyclohydrolase subunit MoaA [Xanthomonas gardneri ATCC 19865] gi|325550424|gb|EGD21219.1| GTP cyclohydrolase subunit MoaA [Xanthomonas gardneri ATCC 19865] Length = 344 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 39/187 (20%), Positives = 64/187 (34%), Gaps = 41/187 (21%) Query: 89 IVHRY--PDRIL-LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEK 141 + RY P R L L ++ C C +C + V G LS E + Sbjct: 14 MQDRYGRPLRDLRLSVIEACNFRCGYCMPADRVPDDYGFDAQQRLSFDQLETLVRAFVS- 72 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF-----------------HSRV 184 + +V TGG+PL+ L ++ L I ++ L R Sbjct: 73 VGVTKVRLTGGEPLLRRD--LPSLVARLTAIDGIEDLALTTNGTLLARQAVALRQAGLRR 130 Query: 185 PIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGII-LLSQSVL 243 V ++PEL + + + + +A I+ AG L V+ Sbjct: 131 ITVSMDALDPELFRRMSGNRGEIA-------------QVLAGIAAAEQAGFQRLKINCVV 177 Query: 244 LKGINDD 250 +GIN+D Sbjct: 178 QRGINED 184 >gi|304391259|ref|ZP_07373203.1| molybdenum cofactor biosynthesis protein A [Ahrensia sp. R2A130] gi|303296615|gb|EFL90971.1| molybdenum cofactor biosynthesis protein A [Ahrensia sp. R2A130] Length = 348 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 31/167 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-- 156 + + C C +C +M K +L+ ++ + + + ++ TGG+PL+ Sbjct: 33 VSVTDRCDFRCVYCMAEDMTFLPKRDLLTLEELDRMCSAF-VDKGVRKLRLTGGEPLVRK 91 Query: 157 --------LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 LS R L L + S++ + EL+ C E V Sbjct: 92 GIMGLFRSLSRHRTSGALDELTLTTN------GSQL-----AKYASELVDCGVE-RVNVS 139 Query: 209 IAIHANHP--YEFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248 I +H E + + + AG+ + +V LKG+N Sbjct: 140 IDT-LDHAKFREITRWGDLGRVMEGLEAARAAGLAVKINAVALKGVN 185 >gi|294811786|ref|ZP_06770429.1| Radical SAM domain-containing protein [Streptomyces clavuligerus ATCC 27064] gi|294324385|gb|EFG06028.1| Radical SAM domain-containing protein [Streptomyces clavuligerus ATCC 27064] Length = 877 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 18/127 (14%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY----IQEKSQIW-----EV 147 I+LK+ C + C C+ E T+ A+++ + E ++ V Sbjct: 11 IVLKVHSRCDLACDHCYIYEHA-DHSWRNRPRAITDEAISWTALRLAEHAKNHALPSVSV 69 Query: 148 IFTGGDPLILSHKRLQKVLKTL-RYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAG 204 I GG+PL+ +RL++V L + V LR H+ ++ P ++ E G Sbjct: 70 ILHGGEPLLAGTERLRRVCAELTSALDGVAALDLRIHTNGL-----QLGPRYLELFDEFG 124 Query: 205 KPVYIAI 211 V +++ Sbjct: 125 VRVGVSL 131 >gi|292493861|ref|YP_003529300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus halophilus Nc4] gi|291582456|gb|ADE16913.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus halophilus Nc4] Length = 447 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 55/151 (36%), Gaps = 24/151 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD- 153 + ++ C YC FC V S+ + +A I + ++ + EV G + Sbjct: 149 AFVSVMEGCSKYCSFC-----VVPYTRGEEISRPLDDVIAEIVDLAEQGVREVTLLGQNV 203 Query: 154 -----PLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 P+ L ++ + I+ ++ +RF + P+ + LIQ E + Sbjct: 204 NAYRGPMGEGDIADLALLITYVASIEGIERIRFTTSHPV----EFSDSLIQAFAEVPE-- 257 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILL 238 + H + P + I L G +L Sbjct: 258 -LVSHLHLPVQ---SGSDRILSLMKRGHTVL 284 >gi|282858466|ref|ZP_06267644.1| radical SAM domain protein [Prevotella bivia JCVIHMP010] gi|282588758|gb|EFB93885.1| radical SAM domain protein [Prevotella bivia JCVIHMP010] Length = 447 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 7/75 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156 L C C +C+ + +S ++ + +I Q+ V T GG+PL+ Sbjct: 103 LAPTSSCNFVCPYCYEKSKPN----NTMSDSTIDSLIKFINGHEQVKTVGITWYGGEPLV 158 Query: 157 LSHKRLQKVLKTLRY 171 + ++K+++ + Sbjct: 159 A-FETIKKIVERIDS 172 >gi|257462243|ref|ZP_05626660.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. D12] gi|317059912|ref|ZP_07924397.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. D12] gi|313685588|gb|EFS22423.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium sp. D12] Length = 348 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 13/119 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-AYIQEKS--QIWEVI 148 ++ + + CP +C FC ++++ G + + +D + Y++ EV Sbjct: 2 KHYNIPIFISHFGCPNHCVFCNQQKINGQETDIRV--EDIHRIVREYLKTLPKKSEKEVA 59 Query: 149 FTGGDPLILSHKRLQKVLKTL-RYIKH--VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 F GG LS + ++ L+TL Y++ +Q +R +R P I E+++ LK+ G Sbjct: 60 FFGGTFTGLSMELQREYLETLQEYMERGDIQGIRLSTR-----PDYIRKEILEQLKKYG 113 >gi|224825445|ref|ZP_03698550.1| Radical SAM domain protein [Lutiella nitroferrum 2002] gi|224602366|gb|EEG08544.1| Radical SAM domain protein [Lutiella nitroferrum 2002] Length = 354 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 46/215 (21%), Positives = 75/215 (34%), Gaps = 41/215 (19%) Query: 104 VCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161 C V C FC M G L S + A +A + + +V+F G G+P Sbjct: 107 GCAVGCTFC----MTGKSGLLRQLGSAEIAAQVALARRIRPVKKVVFMGMGEPAHNLDNV 162 Query: 162 LQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPYE 218 L + L H+ + L + + DP R+ L Q + KP + +++H E Sbjct: 163 LDAI-DLLGSDGHIGHKNLVLST---VGDP-RVFERLPQ---QHVKPALALSLHTTRA-E 213 Query: 219 FSEEAIAAISR-------------LANAGIILLSQSVLLKGINDDPEILANLMRTFVE-- 263 + + R G + Q LL G+ND E + +R Sbjct: 214 LRAQLLPRAPRYDPAELVALGEDYARRVGYPIQYQWTLLAGVNDTQEEMDAAVRLLKGKY 273 Query: 264 --LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 L I PY + G H++ E ++ Sbjct: 274 GVLNIIPY-----NSVEG-DHYQRPSAERIHLMKR 302 >gi|39998330|ref|NP_954281.1| radical SAM domain-containing protein [Geobacter sulfurreducens PCA] gi|39985276|gb|AAR36631.1| radical SAM domain protein [Geobacter sulfurreducens PCA] Length = 812 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 48/192 (25%) Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 P+ R+F+ EL +P+ + DR+ +++ C CRFC Sbjct: 204 PVKRRFL---AELEPAAY---------PTAPVVPFLKTIHDRVSVEISRGCTRGCRFCQA 251 Query: 115 REMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 + + ++T A Y +I + + GD L+ +L L Sbjct: 252 GYLYRPVRERSPEKILALVEETLRATGY----DEISLLSLSTGDYGCLTP-----LLTEL 302 Query: 170 RYIKHVQILRFHS-RVPIVDP-QRI---NPELIQCLKEAGKPVYIAIHANHPYEFSEEA- 223 R+ S R+ + P R+ N EL++ ++ K + + EA Sbjct: 303 MA-------RYASERIAVSLPSMRVGSLNDELVEAIRTVRKTGFT---------LAPEAG 346 Query: 224 IAAISRLANAGI 235 + R+ N GI Sbjct: 347 SERLRRVINKGI 358 >gi|134299776|ref|YP_001113272.1| MiaB-like tRNA modifying protein YliG [Desulfotomaculum reducens MI-1] gi|238065335|sp|A4J5U4|RIMO_DESRM RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|134052476|gb|ABO50447.1| SSU ribosomal protein S12P methylthiotransferase [Desulfotomaculum reducens MI-1] Length = 444 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 27/142 (19%) Query: 79 GDNNHSPLKGIVHRYPD-----------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 G + H+ ++ +++ Y + +K+ C C +C Sbjct: 119 GKDRHTRVEDLLYIYDEHSPRLLSTPSYTAYVKIAEGCDNRCAYC-----AIPDIRGKFR 173 Query: 128 SKDTEAALAYIQEKSQ--IWEVIFTGGD----PLILSHK-RLQKVLKTLRYIKHVQILRF 180 S+ E+ A +++ + + E+I D L L + RL ++L+ L I+ +Q +R Sbjct: 174 SRPIESIEAEVKDLVEKGVREIILIAQDTTRYGLDLYGEYRLDQLLERLGPIQGLQWIRL 233 Query: 181 HSRVPIVDPQRINPELIQCLKE 202 P R +LI+ + E Sbjct: 234 ----LYCYPNRFTDQLIKAMAE 251 >gi|189347396|ref|YP_001943925.1| Radical SAM domain protein [Chlorobium limicola DSM 245] gi|189341543|gb|ACD90946.1| Radical SAM domain protein [Chlorobium limicola DSM 245] Length = 376 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 15/95 (15%), Positives = 40/95 (42%), Gaps = 12/95 (12%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWE 146 ++ + P + + + + C + CR C+ S + +T L + +E ++ + Sbjct: 5 LIMKTPRSVDIDITNRCNLRCRHCY----YYSSDAETPTELETAEWLRFFRELNECSVLR 60 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 V+ GG+P + ++++ + +RF Sbjct: 61 VVLAGGEPFMRED--FRELIDGIVK----NRMRFG 89 >gi|229084333|ref|ZP_04216614.1| Radical SAM domain protein [Bacillus cereus Rock3-44] gi|228698990|gb|EEL51694.1| Radical SAM domain protein [Bacillus cereus Rock3-44] Length = 468 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 9/119 (7%) Query: 58 RQFIPQKEEL-NILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKLLHVCPVYCRFCFRR 115 R+ I EEL N ED + + + Y + L + H C + C +CF Sbjct: 63 RETIADIEELKNDRQLFTED---EYKSLSIDLTNRKTYVKALCLNVAHTCNLSCEYCFAS 119 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 + + ++S + + A+ Y+ E + ++ F GG+PL+ K +++++ R Sbjct: 120 QGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDFFGGEPLMA-WKVVKQIVAYARS 177 >gi|320353874|ref|YP_004195213.1| Radical SAM domain-containing protein [Desulfobulbus propionicus DSM 2032] gi|320122376|gb|ADW17922.1| Radical SAM domain protein [Desulfobulbus propionicus DSM 2032] Length = 295 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 38/91 (41%), Gaps = 18/91 (19%) Query: 97 ILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEA-------ALAYIQEKSQIWEVI 148 ++L++ C C FC G+ + SK E A A+ + + + Sbjct: 23 LILQVTTGCSHNRCTFC------GAYRDKPFQSKSWEQIEADLAFAAAWCRRQ---TTLF 73 Query: 149 FTGGDPLILSHKRLQKVLKTLRY-IKHVQIL 178 GD L L H+RL +L+ +R + ++ + Sbjct: 74 LADGDVLALPHERLVALLERIREQLPWIRRV 104 >gi|119773547|ref|YP_926287.1| hypothetical protein Sama_0407 [Shewanella amazonensis SB2B] gi|119766047|gb|ABL98617.1| conserved hypothetical protein [Shewanella amazonensis SB2B] Length = 294 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 12/89 (13%) Query: 97 ILLKLLHVCP-VYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 ++L++ + C CRFC ++ ++ + D + A I V Sbjct: 18 LILQVTNGCSYNRCRFCDMYTAEQKRFRAFKEDKI--EADLKQAA---ASGVPIRRVFLA 72 Query: 151 GGDPLILSHKRLQKVLKTL-RYIKHVQIL 178 GD + L RL+ +L + RY+ V + Sbjct: 73 DGDAMTLPFSRLEAILLLIHRYLPDVSRI 101 >gi|34581161|ref|ZP_00142641.1| hypothetical protein [Rickettsia sibirica 246] gi|28262546|gb|EAA26050.1| unknown [Rickettsia sibirica 246] Length = 445 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%) Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + + L YP + + C +C FC V S++ E Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185 Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178 + +V+ +G ++L + L +LK L I +++ L Sbjct: 186 VFR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239 Query: 179 RFHSRVPI 186 R+ + PI Sbjct: 240 RYTTSHPI 247 >gi|313680864|ref|YP_004058603.1| 23S rRNA m(2)a-2503 methyltransferase [Oceanithermus profundus DSM 14977] gi|313153579|gb|ADR37430.1| 23S rRNA m(2)A-2503 methyltransferase [Oceanithermus profundus DSM 14977] Length = 370 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 45/199 (22%), Positives = 74/199 (37%), Gaps = 40/199 (20%) Query: 93 YPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVI 148 Y DR + + CP C FC +M + T D A+AY Q +I V+ Sbjct: 124 YADRKTVCISSQVGCPAGCTFCATGKMGFGRNLTGPEILDQILAVAYHQGLGPREIRNVV 183 Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN------PELIQCLK 201 G G+PL L+++ + ++ + + P+RI P I+ L Sbjct: 184 LMGMGEPL-LNYENIAWAVRRMLDKN----------ALAMSPRRITLSTVGIPGGIRRLA 232 Query: 202 E--AGKPVYIAIHA------------NHPYEFSE--EAIAAISRLANAGIILLSQSVLLK 245 E G + +++HA H Y +E EA+ A + + +L+ Sbjct: 233 EGDLGVKLALSLHAPDDETRRRIIPTAHRYSIAEIMEAVRAYFDRTKRRVTIE--YTMLR 290 Query: 246 GINDDPEILANLMRTFVEL 264 +ND E L R L Sbjct: 291 DVNDREEQARELARILKGL 309 >gi|313886783|ref|ZP_07820489.1| tRNA methylthiotransferase YqeV [Porphyromonas asaccharolytica PR426713P-I] gi|312923747|gb|EFR34550.1| tRNA methylthiotransferase YqeV [Porphyromonas asaccharolytica PR426713P-I] Length = 454 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 15/124 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151 R LK+ C YC +C G S+ G++ S +A + E+I TG Sbjct: 165 RTRHFLKVQDGCNYYCTYCTIPAARGISRNGSIASLVAQAERVAELGG----KEIILTGV 220 Query: 152 --GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GD + + L ++L L + + R S ++P+ + PE+IQ + E + Sbjct: 221 NIGDFGRTTGETLLELLHQLTQVAGIARYRIGS----IEPELLTPEIIQFVAETAQ---F 273 Query: 210 AIHA 213 H Sbjct: 274 MPHF 277 >gi|313203633|ref|YP_004042290.1| miab-like tRNA modifying enzyme [Paludibacter propionicigenes WB4] gi|312442949|gb|ADQ79305.1| MiaB-like tRNA modifying enzyme [Paludibacter propionicigenes WB4] Length = 436 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 50/146 (34%), Gaps = 26/146 (17%) Query: 94 PDRILLKLLHVCPVYCRFCF------RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 R LK+ C +C +C R + ++ + EA E+ Sbjct: 148 RTRYFLKVQDGCDYFCTYCTIPYARGRSRNATIPETVAMAMQAVEAGA---------KEI 198 Query: 148 IFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 + +G GD + + ++K L I R S ++P + E+I + + Sbjct: 199 VLSGVNIGDFGKSTGESFFDLVKALDTIPADVRFRISS----IEPNLLTDEIITYISTSH 254 Query: 205 KPVYIAIHANHP-YEFSEEAIAAISR 229 + H + P + E + + R Sbjct: 255 R---FMPHFHIPLQSGTNEVLQLMKR 277 >gi|253701529|ref|YP_003022718.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M21] gi|251776379|gb|ACT18960.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M21] Length = 326 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 30/168 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C + V + +LS ++ + I ++ TGG+PL+ Sbjct: 16 LSVTDRCNMRCSYCMPAQGVEKLEHKEMLSYEELYRVAGACIAQ-GIEKIRVTGGEPLV- 73 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216 K L L+ L + ++ L + E+ Q LK AG + I++ Sbjct: 74 -RKGLVPFLERLSRVPGLKELVLTTNGLQ------LEEMAQPLKRAGVARLNISL----- 121 Query: 217 YEFSEEAIAAISR---LAN----------AG-IILLSQSVLLKGINDD 250 E A I+R L AG L V+++G+NDD Sbjct: 122 DSLRPEVFARITRGADLKRVLSGIEAAEKAGFANLKINMVVMRGVNDD 169 >gi|15674140|ref|NP_268315.1| hypothetical protein L16911 [Lactococcus lactis subsp. lactis Il1403] gi|12725218|gb|AAK06256.1|AE006444_7 unknown protein [Lactococcus lactis subsp. lactis Il1403] Length = 275 Score = 38.5 bits (89), Expect = 1.4, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ + L + C C +CF +EM + S +D E Y+++ + V GGD Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEMKMLNTKEI-SKEDLEKIAYYLEKYK-VPLVAICGGD 67 Query: 154 PLILSHKRLQKVLKTLRYIKH 174 P++ +L ++ L K+ Sbjct: 68 PILHP--KLIDFVQLLSEHKN 86 >gi|301627665|ref|XP_002942990.1| PREDICTED: molybdenum cofactor biosynthesis protein 1-like [Xenopus (Silurana) tropicalis] Length = 649 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 21/91 (23%), Positives = 41/91 (45%), Gaps = 5/91 (5%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 G H Y + + L C + C++C E V + L + ALA + + + ++ Sbjct: 69 GRQHNY---LRISLTEKCNLRCQYCMPEEGVQLTPKSELLTTQEIVALARLFVQEGVNKI 125 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 TGG+PLI ++ LR ++ ++ + Sbjct: 126 RLTGGEPLIRPDVV--DIVAQLRKLEGLKTI 154 >gi|283471147|emb|CAQ50358.1| conserved protein YfkA [Staphylococcus aureus subsp. aureus ST398] Length = 383 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 16/126 (12%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ P E + + ++ L I ++C + C C + Sbjct: 12 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 58 Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 + + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 59 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGIYIQMNS 117 Query: 185 PIVDPQ 190 + PQ Sbjct: 118 NLTLPQ 123 >gi|289192724|ref|YP_003458665.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22] gi|288939174|gb|ADC69929.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22] Length = 280 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 8/76 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 +Y ++LK+ + C + C +C+ ++ + K ++A+ Y+ ++ FTG Sbjct: 2 KY---LILKVTNRCNLNCLYCY----ANNENNKDMDFKTAKSAIDYLLSLDNNLKIQFTG 54 Query: 152 GDPLILSHKRLQKVLK 167 G+PL L+ K ++KV+ Sbjct: 55 GEPL-LNFKLIEKVVD 69 >gi|229825006|ref|ZP_04451075.1| hypothetical protein GCWU000182_00355 [Abiotrophia defectiva ATCC 49176] gi|229790753|gb|EEP26867.1| hypothetical protein GCWU000182_00355 [Abiotrophia defectiva ATCC 49176] Length = 449 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 51/131 (38%), Gaps = 27/131 (20%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +R +K+ C +C +C R + ++ ++T+ + + E++ Sbjct: 145 KNRANIKIQDGCDQFCTYCIIPFVRGRIRSRDMEGIV--EETDRLVK-----AGFREMVL 197 Query: 150 T-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 T G D I R+ ++L L ++ +R S V+P+ I E ++ L + Sbjct: 198 TGIHIGSYGRD--IDGESRMLELLTELNKVEGDFRIRLGS----VEPRLITEEFLEGLVK 251 Query: 203 AGKPVYIAIHA 213 K + H Sbjct: 252 LKK---VCPHF 259 >gi|188995948|ref|YP_001930200.1| putative Fe-S oxidoreductase [Porphyromonas gingivalis ATCC 33277] gi|188595628|dbj|BAG34603.1| putative Fe-S oxidoreductases [Porphyromonas gingivalis ATCC 33277] Length = 444 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R LK+ C +C +C R +++ + AA + +I Sbjct: 150 RTRHFLKVQDGCDYHCSYCTIPKARGRSRNGSIESLVRQAEAVAA----EGGKEIVLTGV 205 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GD + + +L+ L ++ ++ R S ++P ++ ELI + + Sbjct: 206 NIGDFGRSTGETFLDLLRALDQVEGIERYRIGS----IEPNLLSDELID-FCASAHRIAP 260 Query: 210 AIH 212 H Sbjct: 261 HFH 263 >gi|187932848|ref|YP_001886192.1| thiamine biosynthesis protein ThiH [Clostridium botulinum B str. Eklund 17B] gi|187721001|gb|ACD22222.1| putative thiazole biosynthesis protein [Clostridium botulinum B str. Eklund 17B] Length = 472 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 5/100 (5%) Query: 80 DNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134 + H K I + Y +RI+ L L + C C +C L+ ++ + Sbjct: 66 EKIHDLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCTYCPYHHQNKHISRKKLTQEEIKRE 125 Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + +Q+ + TG DP+ + + + +KT+ IKH Sbjct: 126 VIALQDMGHKRLALETGEDPINNPIEYVLESIKTIYSIKH 165 >gi|168206414|ref|ZP_02632419.1| putative radical SAM domain protein [Clostridium perfringens E str. JGS1987] gi|170662155|gb|EDT14838.1| putative radical SAM domain protein [Clostridium perfringens E str. JGS1987] Length = 370 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 13/110 (11%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 YP I +K+ C C+ CF + +SS + + +++ +++ TGG Sbjct: 42 YPILIGIKITDKCNFSCKHCFSN----NSNFNEISSNLVDNIINNFLKENHPYKIYLTGG 97 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 +P + +K + +++ L+ + +I HS I +L + L Sbjct: 98 EPFL--NKNIFNIIQKLK--PYCKIFSIHSNA-----SLITNDLAKKLSN 138 >gi|326407735|gb|ADZ64806.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis subsp. lactis CV56] Length = 275 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ + L + C C +CF +EM + S +D E Y+++ + V GGD Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEMKMLNTKEI-SKEDLEKIAYYLEKYK-VPLVAICGGD 67 Query: 154 PLILSHKRLQKVLKTLRYIKH 174 P++ +L ++ L K+ Sbjct: 68 PILHP--KLIDFVQLLSEHKN 86 >gi|291563521|emb|CBL42337.1| SSU ribosomal protein S12P methylthiotransferase [butyrate-producing bacterium SS3/4] Length = 445 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 21/109 (19%), Positives = 40/109 (36%), Gaps = 10/109 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 LK+ C C +C + G + + + + EK ++ L Sbjct: 146 AFLKIAEGCDKRCTYCIIPYLRGKYR--SVPMEQLVREAEELAEKGVKELILVAQETTLY 203 Query: 157 LSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 K+L ++L+ L + +Q +R P+ I ELI+ +K Sbjct: 204 GKDLYGEKKLPELLRRLAAVSGIQWIRLQ----YCYPEEITDELIETIK 248 >gi|281492812|ref|YP_003354792.1| radical SAM superfamily Fe-S oxidoreductase [Lactococcus lactis subsp. lactis KF147] gi|281376464|gb|ADA65950.1| Fe-S oxidoreductase, radical SAM superfamily [Lactococcus lactis subsp. lactis KF147] Length = 275 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 4/81 (4%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ + L + C C +CF +EM + S +D E Y+++ + V GGD Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEMKMLNTKEI-SKEDLEKIAYYLEKYK-VPLVAICGGD 67 Query: 154 PLILSHKRLQKVLKTLRYIKH 174 P++ +L ++ L K+ Sbjct: 68 PILHP--KLIDFVQLLSEHKN 86 >gi|213963740|ref|ZP_03391990.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga sputigena Capno] gi|213953620|gb|EEB64952.1| oxygen-independent coproporphyrinogen III oxidase [Capnocytophaga sputigena Capno] Length = 454 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 34/79 (43%), Gaps = 9/79 (11%) Query: 98 LLKLLHVCPVYCRFC-------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 L L C C FC R EM VL K+ + +++E+ +I E+ Sbjct: 54 LYIHLPFCESLCTFCGCHKRITKRHEMEIPYIEAVL--KEWQLYTDFLKERPRIKEIHLG 111 Query: 151 GGDPLILSHKRLQKVLKTL 169 GG P +L+++++ + Sbjct: 112 GGTPTFFQPSQLRRLIEGI 130 >gi|170729111|ref|YP_001763137.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC 51908] gi|169814458|gb|ACA89042.1| molybdenum cofactor biosynthesis protein A [Shewanella woodyi ATCC 51908] Length = 326 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 61/160 (38%), Gaps = 17/160 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + VC C +C + + L+ + E +A E ++ TGG+P + Sbjct: 17 MSVTDVCNFKCTYCLPDGYRPNGRSKFLALSEIENLVAAFAE-VGTQKIRITGGEPTLRK 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217 +++ + + +I + + R+ + + + +++ + P Sbjct: 76 D--FTDIIRAVA--DNDKIKTIAT---TTNGYRLEKHAKEWYDAGLRRINVSVDSLDPKM 128 Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249 + + E + I +AG + +VLLKG+ND Sbjct: 129 FYQITGENKFDEVMRGIDAALDAGFERVKINAVLLKGLND 168 >gi|90022940|ref|YP_528767.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Saccharophagus degradans 2-40] gi|122995883|sp|Q21FH4|MIAB_SACD2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|89952540|gb|ABD82555.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Saccharophagus degradans 2-40] Length = 454 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 37/113 (32%), Gaps = 13/113 (11%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + ++ C YC FC G + + D + ++ + + EV G + Sbjct: 156 TAFVSVMEGCSKYCTFCVVPYTRGEEVSR--PAVDVLREVTHLASQ-GVREVNLLGQNVN 212 Query: 156 ILSHKR------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 L +++ + I + +RF + P LIQ E Sbjct: 213 AYRDDSSGEVIDLAELIAAVADIDGIDRIRFTTSH----PMEFTESLIQAYAE 261 >gi|326204016|ref|ZP_08193877.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782] gi|325985783|gb|EGD46618.1| Radical SAM domain protein [Clostridium papyrosolvens DSM 2782] Length = 456 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 3/74 (4%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P I + C CR+C+ + + L+ ++ + ++++++TGG+ Sbjct: 114 PKTISFHVTSTCNKECRYCYLDAKRENLEKDALTFEEVVRMIDE-AAAIGVYKILYTGGE 172 Query: 154 PLILSHKRLQKVLK 167 P + L +++ Sbjct: 173 PFLRKD--LLDIIE 184 >gi|304316648|ref|YP_003851793.1| MiaB-like protein tRNA modifying enzyme [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778150|gb|ADL68709.1| MiaB-like protein tRNA modifying enzyme [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 452 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 15/118 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R LK+ C +C +C + + S+ + L ++ + EVI TG Sbjct: 161 HTRAYLKIQDGCNQFCTYC-----IIPYARGPVRSRRPDNILDEVKRLRDNGYKEVILTG 215 Query: 152 GDPLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L + L ++K + + ++ +R S P + I+ + K Sbjct: 216 IHVASYGKDLENINLLDIIKMIHEVDGIERIRMSSIEPTFL----TEDFIKEVASLPK 269 >gi|221232993|ref|YP_002515429.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Caulobacter crescentus NA1000] gi|220962165|gb|ACL93521.1| tRNA 2-methylthioadenosine synthase [Caulobacter crescentus NA1000] Length = 448 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 15/121 (12%) Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 + +E+ D + H + G+ L + C +C FC G + ++ Sbjct: 136 DFAADEKFDALPAERH--VTGVT------AFLTVQEGCDKFCTFCVVPYTRGGEWSRPVN 187 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH---KRLQKVLKTLRYIKHVQILRFHSRV 184 E A + EV G + + L K+++ L I + +R+ + Sbjct: 188 -DIVEEAKR--LADQGVREVTLLGQN-VNAYDGDGSTLAKLVRQLAKIDGLDRIRYTTSH 243 Query: 185 P 185 P Sbjct: 244 P 244 >gi|157826266|ref|YP_001493986.1| hypothetical protein A1C_06245 [Rickettsia akari str. Hartford] gi|229890630|sp|A8GQ03|MIAB_RICAH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|157800224|gb|ABV75478.1| hypothetical protein A1C_06245 [Rickettsia akari str. Hartford] Length = 445 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 27/137 (19%), Positives = 48/137 (35%), Gaps = 26/137 (18%) Query: 76 DPIGDNNHSPLKGIVHRYPDRI--LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + + L YP + + C +C FC V S++ E Sbjct: 133 DFVEEAKFDNLP--EQLYPQGASSFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185 Query: 134 ALAYIQEKSQI----WEVIFTGGDPLILSHK-------RLQKVLKTLRYIKHVQILRFHS 182 Y + + E++ G + + K L +LK L I +++ LR+ + Sbjct: 186 V--YREALQVVSGGAKEIMLLGQNVNAYNWKGSADKIFSLADLLKHLAQIPNLERLRYMT 243 Query: 183 RVPIVDPQRINPELIQC 199 PI + +LIQ Sbjct: 244 SHPID----MTDDLIQL 256 >gi|325955310|ref|YP_004238970.1| MiaB-like tRNA modifying enzyme [Weeksella virosa DSM 16922] gi|323437928|gb|ADX68392.1| MiaB-like tRNA modifying enzyme [Weeksella virosa DSM 16922] Length = 444 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 42/131 (32%), Gaps = 23/131 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C C +C + K+ I E++ TG Sbjct: 144 RTRAFLKVQDGCDYKCTYCTIPLARGISRSDELHNVLKNAREI-----ANQDIKEIVLTG 198 Query: 152 ---GDPLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 GD ++++ L + +++ +R S ++P + E I + + Sbjct: 199 VNIGDYGKGEFGNKKHEHTFLELVEALDEVDNIERIRISS----IEPNLLKNETISFVAQ 254 Query: 203 AGKPVYIAIHA 213 + + H Sbjct: 255 SKR---FVPHF 262 >gi|299145602|ref|ZP_07038670.1| 2-methylthioadenine synthetase [Bacteroides sp. 3_1_23] gi|298516093|gb|EFI39974.1| 2-methylthioadenine synthetase [Bacteroides sp. 3_1_23] Length = 436 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 68/227 (29%), Gaps = 71/227 (31%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--HHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G D + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 + L+ I+D+ + LMR Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316 ++ E+ +++ + ++ G+ + ++ PG Sbjct: 268 --------------VSKEDTYQLIEQFRREVPGIHLRTTLMVGHPGE 300 >gi|253999825|ref|YP_003051888.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylovorus sp. SIP3-4] gi|313201799|ref|YP_004040457.1| tRNA-i(6)a37 thiotransferase enzyme miab [Methylovorus sp. MP688] gi|253986504|gb|ACT51361.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylovorus sp. SIP3-4] gi|312441115|gb|ADQ85221.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylovorus sp. MP688] Length = 443 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 26/135 (19%), Positives = 48/135 (35%), Gaps = 22/135 (16%) Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQI 144 H P R+ L ++ C YC FC V +G S + + IQ + + Sbjct: 140 HLPPPRVEGAAAFLSIMEGCNKYCSFCV----VPYTRGEEFSRPFEDILVEAIQLAEQGV 195 Query: 145 WEVIFTGGDP-------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI 197 E+ G + + L ++ + I ++ +RF + P ++ LI Sbjct: 196 KEITLLGQNVNAYRSTSADGTAADLAMLIDYIAEIPQIERIRFTTSH----PNEMSEALI 251 Query: 198 QCLKEAGKPVYIAIH 212 C K + +H Sbjct: 252 DCFARIPK-LVSHLH 265 >gi|210134483|ref|YP_002300922.1| miaB-like tRNA modifying enzyme [Helicobacter pylori P12] gi|210132451|gb|ACJ07442.1| miaB-like tRNA modifying enzyme [Helicobacter pylori P12] Length = 418 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHS 182 + + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDKESNIARLIKKLSQIAGLKRIRIGS 221 >gi|78222909|ref|YP_384656.1| cobalamin B12-binding/radical SAM family protein [Geobacter metallireducens GS-15] gi|78194164|gb|ABB31931.1| Cobalamin B12-binding/Radical SAM [Geobacter metallireducens GS-15] Length = 434 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 40/196 (20%), Positives = 70/196 (35%), Gaps = 41/196 (20%) Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 P+ R IP + L I P R D + +Y ++ CP C FC Sbjct: 132 PLYRAPIPTDDRLVI-PWSRRDILA----------GRQYLTTQTVQASRGCPYDCPFCT- 179 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLILSHKRLQKVLKTLRY 171 V G ++ + LA ++ V GDP+ +L+ + Sbjct: 180 ---VTPYFGRTFRYRNPDDVLAELRSFEGKLMVFVDDNILGDPVRAKP-----ILEGMAG 231 Query: 172 IKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYIA-------IHANHPYEFSEE 222 + LR+ + + R +PEL++ + +G HANH + Sbjct: 232 M----NLRWGGQANL----RFAEDPELVKLVARSGCIGIFVGIESVTGPHANHAKTGNGS 283 Query: 223 AI-AAISRLANAGIIL 237 + + R+ +AGI+L Sbjct: 284 SQIDLVKRVRDAGIVL 299 >gi|332882828|ref|ZP_08450439.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329 str. F0087] gi|332679330|gb|EGJ52316.1| tRNA methylthiotransferase YqeV [Capnocytophaga sp. oral taxon 329 str. F0087] Length = 435 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 23/131 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R LK+ C C +C + S E L+ + I E++ TG Sbjct: 140 RTRAFLKVQDGCDYKCTYCTI-----PMARGISRSDTIENILSNAKKISDKGIKEIVLTG 194 Query: 152 ---GDPLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 GD ++++ L ++ ++ LR S ++P I E I + + Sbjct: 195 VNIGDYGKGEFGNKKHEHTFLELVEALDKVEGIERLRISS----IEPNLIKDETIDFIAQ 250 Query: 203 AGKPVYIAIHA 213 + H Sbjct: 251 SN---SFVPHF 258 >gi|332673126|gb|AEE69943.1| possible 2-methylthioadenine synthase [Helicobacter pylori 83] Length = 418 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C V + + K E + + EV+ TG + Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCSKGVQEVVLTGTN 189 Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + + +++K L I ++ +R S Sbjct: 190 VGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|332526652|ref|ZP_08402757.1| molybdenum cofactor biosynthesis protein A [Rubrivivax benzoatilyticus JA2] gi|332110913|gb|EGJ11090.1| molybdenum cofactor biosynthesis protein A [Rubrivivax benzoatilyticus JA2] Length = 372 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 34/82 (41%), Gaps = 8/82 (9%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F R +LS ++ + + ++ TGG+ Sbjct: 44 ISVTDRCNFRCGYCMPSEVFDRRYRFLPHDALLSFEEITRVASVFLAH-GVRKLRLTGGE 102 Query: 154 PLILSHKRLQKVLKTLRYIKHV 175 PL+ K+L +++ L ++ V Sbjct: 103 PLL--RKQLPSLVEQLAALRTV 122 >gi|301053446|ref|YP_003791657.1| coenzyme PQQ synthesis protein [Bacillus anthracis CI] gi|300375615|gb|ADK04519.1| coenzyme PQQ synthesis protein [Bacillus cereus biovar anthracis str. CI] Length = 404 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 36 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 91 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 92 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 142 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H + + AI L I + +V+ D E +A L+ Sbjct: 143 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 202 Query: 261 F 261 Sbjct: 203 L 203 >gi|290474036|ref|YP_003466910.1| molybdopterin biosynthesis protein A [Xenorhabdus bovienii SS-2004] gi|289173343|emb|CBJ80120.1| molybdopterin biosynthesis protein A [Xenorhabdus bovienii SS-2004] Length = 326 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 39/218 (17%), Positives = 74/218 (33%), Gaps = 40/218 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + VC C +C + LS + E ++ TGG+P + Sbjct: 17 LSITDVCNFRCTYCLPDGYHPHGHQSFLSLPEIRRVSRAFAELGT-EKIRLTGGEPTMRR 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216 ++ T+ ++ + + R+ ++ + KEAG I + + P Sbjct: 76 D--FCDIIATVHENPQIKKIAITTNG-----YRMERDVARW-KEAGLT-AINVSVDSLDP 126 Query: 217 YEFSEEAIA--------AISRLANAGII-LLSQSVLLKGINDD--PEILANLMRTFVELR 265 +F I +AG + +VL+K +ND P LA + ++LR Sbjct: 127 RQFHAITGQDKFFQIMRGIDAAFDAGFSAVKVNAVLMKNVNDTSLPAFLAWIKHRPIQLR 186 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 + G EG ++ + +SG Sbjct: 187 ------FIELMETG---------EGSELFR--RRHLSG 207 >gi|317127531|ref|YP_004093813.1| YfkB-like domain-containing protein [Bacillus cellulosilyticus DSM 2522] gi|315472479|gb|ADU29082.1| YfkB-like domain-containing protein [Bacillus cellulosilyticus DSM 2522] Length = 371 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 14/83 (16%), Positives = 35/83 (42%), Gaps = 4/83 (4%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + ++C + C C + ++ L + L +++ + + TGG+P + Sbjct: 30 VEFTTTNICNMRCEHCAVGYSLQTKDPEALPLELFTQRLDEVKD---LRALSITGGEP-M 85 Query: 157 LSHKRLQKVLKTLRYIKHVQILR 179 +S K ++ + L H + +R Sbjct: 86 MSMKSVKNYVLPLLKYAHERGIR 108 >gi|281420874|ref|ZP_06251873.1| 2-methylthioadenine synthetase [Prevotella copri DSM 18205] gi|281405166|gb|EFB35846.1| 2-methylthioadenine synthetase [Prevotella copri DSM 18205] Length = 536 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 24/122 (19%), Positives = 47/122 (38%), Gaps = 11/122 (9%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C YC +C G+ + + S E A A + +I Sbjct: 239 RTRYFLKVQDGCNYYCTYCTIPFARGNSRNPSIQSLVAQCEQAAA--EGGKEIVITGVNI 296 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 GD +H+R ++K + ++ ++ R S ++P + +LI+ ++ Sbjct: 297 GDFGQTTHERFIDLVKAMDQVEGIKRYRISS----LEPDLCDDDLIEYCAQSR---AFMP 349 Query: 212 HA 213 H Sbjct: 350 HF 351 >gi|217033424|ref|ZP_03438854.1| hypothetical protein HP9810_1g38 [Helicobacter pylori 98-10] gi|216944129|gb|EEC23557.1| hypothetical protein HP9810_1g38 [Helicobacter pylori 98-10] Length = 418 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C V + + K E + + EV+ TG + Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCSKGVQEVVLTGTN 189 Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + + +++K L I ++ +R S Sbjct: 190 VGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|300814699|ref|ZP_07094949.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus sp. oral taxon 836 str. F0141] gi|300511172|gb|EFK38422.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus sp. oral taxon 836 str. F0141] Length = 467 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 16/125 (12%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW 145 G Y + + +++ C +C FC + S++ + + I+ Sbjct: 168 GANRLYSYKSYVNIMYGCNNFCTFC-----IVPYTRGREKSREADEIVDEIKSLIDKGSK 222 Query: 146 EVIFTGGDP-----LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 E+ G + + + ++L + IK V+ +RF + P+ I+ ELI Sbjct: 223 EITLLGQNVNSYGRGLENKTTFAQLLYRINDIKGVERIRFMTSH----PKDISDELIYAF 278 Query: 201 KEAGK 205 ++ Sbjct: 279 RDLDH 283 >gi|166031330|ref|ZP_02234159.1| hypothetical protein DORFOR_01017 [Dorea formicigenerans ATCC 27755] gi|166028735|gb|EDR47492.1| hypothetical protein DORFOR_01017 [Dorea formicigenerans ATCC 27755] Length = 308 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 46/222 (20%), Positives = 82/222 (36%), Gaps = 47/222 (21%) Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ--KVLKTLRYIKHVQILRFH 181 +LS ++ E K+ I + TGG+PL+ RL +++ ++ I V+ + Sbjct: 12 NILSYEEIEMVCQA-AAKAGIRKFKITGGEPLV----RLGCPELIGKIKKIPRVEQVTMT 66 Query: 182 SRVPI---VDPQRINPEL------IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLAN 232 + + P+ + L + L V E + ++ + + Sbjct: 67 TNGVLLSKYLPELLKNGLDAVNISLDTLDRERYQV-----ITGRDELFR-VLESVDQAVD 120 Query: 233 AGIILLSQSVLLKGIN-DDPEILANL-MRTFVELRIKPYYLHHPDLAAGTS-HFRLTIEE 289 AGI + SVL KG+N D+ L L + +++R + G F E Sbjct: 121 AGIPVKINSVLQKGMNEDEFLALVRLTLEKKLDVR------FIEMMPIGLGKKFETIYNE 174 Query: 290 GQKIVASLKEKIS-----------GLCQPFYILDLPGGYGKV 320 I+ LK++ G Y+ LPGG G V Sbjct: 175 --DILEELKKQYPDIQEDRQIHGNGPAV--YVK-LPGGQGSV 211 >gi|315924474|ref|ZP_07920696.1| PDZ domain protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315622353|gb|EFV02312.1| PDZ domain protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 457 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 36/206 (17%), Positives = 71/206 (34%), Gaps = 52/206 (25%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C C FCF +M + T+ YI++ + ++ G+ + L++ Sbjct: 88 RRCSNGCIFCFIDQMPPGMRDTL-----------YIKDDDERMSFLY--GNYITLTN--- 131 Query: 163 QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEE 222 L + +I+R+H +PI ++ +H F+ Sbjct: 132 ------LSEAEKERIVRYHI-MPINISVHTTNPKLRR---------QMLH----NRFAGS 171 Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE-LRIKPYYLHHPDLAAGTS 281 + + I + SQ VL +ND E L RT + + P + G + Sbjct: 172 VMDDLQFFQKHEIAMNSQIVLCPEVNDGEE----LTRTLGDLAGLYPQMRSVSVVPLGMT 227 Query: 282 HFR---LTI-----EEGQK---IVAS 296 FR + E+ ++ I+ + Sbjct: 228 KFRKGLTPLKSVNREKARETIAIIEA 253 >gi|298507261|gb|ADI85984.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter sulfurreducens KN400] Length = 831 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 37/192 (19%), Positives = 68/192 (35%), Gaps = 48/192 (25%) Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 P+ R+F+ EL +P+ + DR+ +++ C CRFC Sbjct: 223 PVKRRFL---AELEPAAY---------PTAPVVPFLKTIHDRVSVEISRGCTRGCRFCQA 270 Query: 115 REMVGSQKGTVLSS-----KDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 + + ++T A Y +I + + GD L+ +L L Sbjct: 271 GYLYRPVRERSPEKILALVEETLRATGY----DEISLLSLSTGDYGCLTP-----LLTEL 321 Query: 170 RYIKHVQILRFHS-RVPIVDP-QRI---NPELIQCLKEAGKPVYIAIHANHPYEFSEEA- 223 R+ S R+ + P R+ N EL++ ++ K + + EA Sbjct: 322 MA-------RYASERIAVSLPSMRVGSLNDELVEAIRTVRKTGFT---------LAPEAG 365 Query: 224 IAAISRLANAGI 235 + R+ N GI Sbjct: 366 SERLRRVINKGI 377 >gi|297569134|ref|YP_003690478.1| Protein of unknown function DUF2344 [Desulfurivibrio alkaliphilus AHT2] gi|296925049|gb|ADH85859.1| Protein of unknown function DUF2344 [Desulfurivibrio alkaliphilus AHT2] Length = 848 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 44/227 (19%), Positives = 83/227 (36%), Gaps = 55/227 (24%) Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 P+ R+ + E++ D+ +PL DR+ +++ C CRFC Sbjct: 231 PVRRRVLADLEQV------------DHAVAPLVPATRVVHDRLGVEIARGCTRGCRFCQA 278 Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 + + S + L I++ ++ + + GD + ++ L +++ L Sbjct: 279 GVIYRPVREREPSRV-LQEILGKIEQTGFEEVALLSLSSGDYACI-NELLGQLMDALER- 335 Query: 173 KHVQILRFHSRVPIVDP-QRI---NPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAIS 228 R RV + P R+ PE+++ +K K + + EA + Sbjct: 336 ------R---RVSVSLPSMRVGSLTPEMMEQIKRVRKTGFT---------LAPEAGS--D 375 Query: 229 RLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR---IKPYYLH 272 RL V+ KGI E L R+ L IK Y++ Sbjct: 376 RLRR---------VINKGI--SEEDLLAASRSAFGLGWKLIKLYFMF 411 >gi|257065138|ref|YP_003144810.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] gi|256792791|gb|ACV23461.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] Length = 293 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%) Query: 94 PDRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTG 151 P LL++ C C+FC M + V S +D EA LA ++ + Sbjct: 14 PTWPLLEITAGCTHNKCKFCT---MYKGVRFDVRSIEDIEADLAELRTMVPHARTIQLLS 70 Query: 152 GDPLILSHKRLQKVLKTLRY 171 G+PL L + RL+ +L+ + Sbjct: 71 GNPLALPYSRLKPILEKINE 90 >gi|196041174|ref|ZP_03108469.1| putative coenzyme PQQ synthesis protein [Bacillus cereus NVH0597-99] gi|196027882|gb|EDX66494.1| putative coenzyme PQQ synthesis protein [Bacillus cereus NVH0597-99] Length = 377 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHSLELTFEEGKKLIDDIYEMENPML---VFTG 64 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 65 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 115 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H + + AI L I + +V+ D E +A L+ Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 175 Query: 261 F 261 Sbjct: 176 L 176 >gi|114770160|ref|ZP_01447698.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium HTCC2255] gi|114548997|gb|EAU51880.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [alpha proteobacterium HTCC2255] Length = 442 Score = 38.5 bits (89), Expect = 1.5, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 45/133 (33%), Gaps = 16/133 (12%) Query: 75 EDPIGDN--NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 D ++ H P R P L + C +C FC + + + Sbjct: 128 TDFPEEDKFEHLPAAPKTKRAPS-AFLTVQEGCDKFCAFCV-VPFTRGAEVSRPVLQIIN 185 Query: 133 AALAYIQEKSQIWEVIFTGGD------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 A ++ + ++ G + + L +++K L I+ ++ +RF + P Sbjct: 186 EARDLVER--GVRDITLLGQNVNAYHGAMKSGDANLPQLIKELSKIEELKRIRFTTSHPN 243 Query: 187 VDPQRINPELIQC 199 + ELI Sbjct: 244 D----MTQELIDA 252 >gi|329848315|ref|ZP_08263343.1| radical SAM superfamily protein [Asticcacaulis biprosthecum C19] gi|328843378|gb|EGF92947.1| radical SAM superfamily protein [Asticcacaulis biprosthecum C19] Length = 405 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 43/233 (18%), Positives = 78/233 (33%), Gaps = 36/233 (15%) Query: 104 VCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYI------QEKSQIWEVIFTG-GDPL 155 C + C FC + + + A + +E Q+ ++F G G+PL Sbjct: 131 GCTLNCTFCHTGTQKLVRNLTAAEIVAQVQVARDDLGEWPSPKEDRQLSNIVFMGMGEPL 190 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 L V + I + + R V + PEL + I++HA + Sbjct: 191 Y----NLDNVADAIDIISDNEGIALSRRRITVSTSGVVPELEALGNRTAAMLAISLHATN 246 Query: 216 P---YEFSEEAIAAISRLANAGI---ILLSQS-------VLLKGINDDPEILANLMRTFV 262 E AGI LS + V+LKG+ND P L++ Sbjct: 247 DTLRDEIVPLNKKYNIEALMAGIRAYPGLSNARRVTFEYVMLKGVNDSPAEARALIKLLK 306 Query: 263 ----ELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 ++ + P +P + ++ + + A++ K +G P Sbjct: 307 GIPAKINLIP---FNP---WPGTDYQCSDWTAIETFAAILNK-AGYASPIRTP 352 >gi|170290638|ref|YP_001737454.1| radical SAM domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170174718|gb|ACB07771.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 326 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 45/240 (18%), Positives = 83/240 (34%), Gaps = 46/240 (19%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P R+ L L + C C C+ ++ LS++D + L I + +V FTGG+ Sbjct: 4 PLRVDLILTYRCNNDCIHCYSS---SPRETEELSTEDWKRVLK-IFHGLGVPQVTFTGGE 59 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 P L + L ++ + + V + + + ++ +L + L EAG Sbjct: 60 P-TLR-EDLVDLVSEAQKLGMVSGI-------VTNGTLLSDDLSRRLVEAGLDYAQITLE 110 Query: 212 ------HANHPYEFSEE------AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 H + + I + + G+ + S LLK + + + +R Sbjct: 111 SKDPEVH----DSITGVRGSWERTVRGIKNMVSTGVYVSVNSTLLKM---NSPTILDTIR 163 Query: 260 TFVELRIKPYYLHHPDLA---AGTSHFRLTIEEGQKIVASLKEKI-------SGLCQPFY 309 EL + Y L + T + EE I+ KE + Y Sbjct: 164 FVAELGVHGYSL--NRVIYSGRATLDMEPSFEEMINIITEAKELAIELDLDFTWYGVTRY 221 >gi|73667402|ref|YP_303418.1| tRNA 2-methylthioadenosine synthase [Ehrlichia canis str. Jake] gi|72394543|gb|AAZ68820.1| tRNA 2-methylthioadenosine synthase [Ehrlichia canis str. Jake] Length = 411 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 46/118 (38%), Gaps = 23/118 (19%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R L+++ + C C FC + G + + E + +++ + EV+FTG Sbjct: 126 KSRALIEIQNGCNHECTFCVITKARGDNRSL-----NIEDIITKVRDCVNNGYNEVVFTG 180 Query: 152 GDPLILSHKRLQKVLKT---------LRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 D +S L + L + ++ LR S + + + I +L+ + Sbjct: 181 VD---ISDFGLDIYGQRVLGTMVKRVLSAVPQLRRLRL-SSIDVAE---IEDDLVDII 231 >gi|327541062|gb|EGF27613.1| molybdenum cofactor biosynthesis protein A [Rhodopirellula baltica WH47] Length = 359 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 3/88 (3%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R D + + + C + C +C + VL+ ++ E + ++ + ++ T Sbjct: 36 RRHDSLRISITDRCNIRCFYCMPEHDADFLPRSGVLTFEEIERLAGLLVKRCGVRDIRIT 95 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178 GG+PL+ +++ L I ++ L Sbjct: 96 GGEPLVRRDCV--DLIQMLARIDGLEDL 121 >gi|294788304|ref|ZP_06753547.1| MoaA/NifB/PqqE family protein [Simonsiella muelleri ATCC 29453] gi|294483735|gb|EFG31419.1| MoaA/NifB/PqqE family protein [Simonsiella muelleri ATCC 29453] Length = 477 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 34/171 (19%), Positives = 68/171 (39%), Gaps = 32/171 (18%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPLI 156 ++++ C + C CF G+ + + E L I +V+ +GG+P I Sbjct: 102 IVEINRACNLNCPVCFAS--SGTHQTEHYPIEIVEKMLDAIVANEGEPDVVQLSGGEPTI 159 Query: 157 LSHKRLQKVLKTLRY--IKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKP-VYI 209 + +L R IKH+ I +R + E ++ L ++G + I Sbjct: 160 HP--QFFDILAAARKRPIKHLMINTNGVRIAQ----------DFEFVEKLAQSGLHGLEI 207 Query: 210 AIHANHP-YEFSEEAIAA-ISRLANAGIILLSQ----SVLL----KGINDD 250 + + E ++ A +SR+ + L++ + L+ KG+ND Sbjct: 208 YLQFDSLNNEVTQTLRGADLSRIRKQALDNLNRVGLSTTLVVTVAKGVNDH 258 >gi|170761673|ref|YP_001788384.1| radical SAM domain-containing protein [Clostridium botulinum A3 str. Loch Maree] gi|169408662|gb|ACA57073.1| radical SAM domain protein [Clostridium botulinum A3 str. Loch Maree] Length = 455 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 6/87 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF E K ++S + + A+ ++ EKS EV GG+PL Sbjct: 99 LNIAHDCNLRCKYCFADEGEYKGKRELMSPRVGKKAIDFVIEKSGPRKNIEVDLFGGEPL 158 Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180 + ++++++ + + H +I+RF Sbjct: 159 MA-FSTIKEIVEYAKEQEEKHNKIIRF 184 >gi|87310727|ref|ZP_01092854.1| hypothetical protein DSM3645_06861 [Blastopirellula marina DSM 3645] gi|87286484|gb|EAQ78391.1| hypothetical protein DSM3645_06861 [Blastopirellula marina DSM 3645] Length = 432 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 32/173 (18%), Positives = 63/173 (36%), Gaps = 20/173 (11%) Query: 55 PIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDR--ILLKLLHVCPVYCRFC 112 P +P E+ E D +G + + + DR +K+ C + C FC Sbjct: 90 PAELAVLPNVVEVVENKREIPDLLGRFGVIDVPTGLSTFGDRHRAFVKVQDGCLLRCTFC 149 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---GDPLI--------LSHKR 161 + SS++ A +A + + E++ TG G + R Sbjct: 150 IIP--TVRPEMYSRSSEEIIAEVARLADN-GFREIVLTGIHLGHYGVDQNRGKSKAEWMR 206 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L ++++L + +R S + + + ELI+ + E V +H + Sbjct: 207 LAHLVRSLARLDGDFRIRM-SSIEATE---VTRELIEVMGEFPDRVCPHLHIS 255 >gi|114565072|ref|YP_752586.1| molybdenum cofactor biosynthesis protein A [Shewanella frigidimarina NCIMB 400] gi|114336365|gb|ABI73747.1| molybdenum cofactor biosynthesis protein A [Shewanella frigidimarina NCIMB 400] Length = 328 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 12/100 (12%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQE---KSQIW 145 R D + L + C C +C S+ T L L++I + + + Sbjct: 9 QRKVDYLRLSVTDRCDFRCVYCM------SEDPTFLPKSHVLSLEELSWIAQAFTELGVK 62 Query: 146 EVIFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV 184 ++ TGG+PL+ S +L K+L+ L ++ + + SR+ Sbjct: 63 KIRLTGGEPLVRSDCDKLVKLLRKLPQLEELSMTTNGSRL 102 >gi|312898217|ref|ZP_07757608.1| hypothetical protein HMPREF9429_00887 [Megasphaera micronuciformis F0359] gi|310620714|gb|EFQ04283.1| hypothetical protein HMPREF9429_00887 [Megasphaera micronuciformis F0359] Length = 322 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 50/135 (37%), Gaps = 17/135 (12%) Query: 90 VHRYPDR-----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 +H Y R + + + + C C FC + + S+ ++ + + Sbjct: 15 IHPYKTREGGATVTVFVPYNCLNNCPFCINKAEY--ENPEGFSADKICESIRRMDAITPY 72 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 + +FTGG+P L + + L I + ++ +P+ + Q + I E Sbjct: 73 CDFVFTGGEPF----ADLNVLQQMLDEIPKTHKVYINTTLPVSEFQ--TEDDIVRFTEKN 126 Query: 205 KP----VYIAIHANH 215 K + ++ H H Sbjct: 127 KDKITCINVSRHMQH 141 >gi|269798274|ref|YP_003312174.1| biotin and thiamin synthesis associated [Veillonella parvula DSM 2008] gi|269094903|gb|ACZ24894.1| biotin and thiamin synthesis associated [Veillonella parvula DSM 2008] Length = 472 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y DRI+L + C C +C K L+ + ++ VI Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYI 172 +G DPL L+ +L++++ I Sbjct: 140 ESGEDPLNNP---LEYILESIKTI 160 >gi|116754458|ref|YP_843576.1| radical SAM domain-containing protein [Methanosaeta thermophila PT] gi|116665909|gb|ABK14936.1| Radical SAM domain protein [Methanosaeta thermophila PT] Length = 377 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 70/198 (35%), Gaps = 39/198 (19%) Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 L + R PD+I + + CP C+ C + + + L +D + + Sbjct: 85 VLASLGRRTPDQITISVTEECPNRCKHC---ALPDTGEHLSLEPEDVQRIIDQ-ALDLGS 140 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLK 201 +IF GG+P + + L +++ + R L + L+ Sbjct: 141 TLIIFDGGEPCMY--RELPELVSYVDD-----------RAVTTMFTSGAGFTDGLAKQLR 187 Query: 202 EAGKPVYIAIHANHPYE-----------FSEEAIAAISRLANAG--IILLSQSVLLKGIN 248 +AG + + + P E +A+ AI +AG + L V+L+ Sbjct: 188 DAGLQ-AVNVSLDSPLEEEHDAIRGRKGVYRDAMNAIKHALSAGLLVDLY---VVLRH-- 241 Query: 249 DDPEILANLMRTFVELRI 266 D+ L + ++ + Sbjct: 242 DNIMHLQSFHELARKMGV 259 >gi|313836301|gb|EFS74015.1| radical SAM domain protein [Propionibacterium acnes HL037PA2] gi|314928766|gb|EFS92597.1| radical SAM domain protein [Propionibacterium acnes HL044PA1] gi|314971198|gb|EFT15296.1| radical SAM domain protein [Propionibacterium acnes HL037PA3] gi|328906485|gb|EGG26260.1| molybdenum cofactor biosynthesis enzyme/coproporphyrinogen III oxidase [Propionibacterium sp. P08] Length = 426 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 33/204 (16%), Positives = 67/204 (32%), Gaps = 37/204 (18%) Query: 93 YPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 P ++ ++ C + C+ C + Q + + +Y + + I Sbjct: 45 KPFIVIWEVTRACALVCQHCRAEAQHHAAPGQLTNAQGHELIDQLTSYEKPYPML---IL 101 Query: 150 TGGDPLILSHKRLQKVLK-TLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 TGGD L +++ + HV + P V P + ++ +++AG + Sbjct: 102 TGGDCFERPD--LVDLIEYGVSKGLHVSV------SPSVTP-LFTHDRVKAVQDAGVSMM 152 Query: 209 IA--------IH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLL-KGINDDPEIL 254 H P F + A L G+ +V K I++ P++L Sbjct: 153 SMSLDGGSAATHDAFRGF--PGTFDR-TVEACHMLRAMGMKFQLNTVFTAKNIHEAPQML 209 Query: 255 ANLMRTFVELRIKPYYLHHPDLAA 278 N ++L +Y Sbjct: 210 KNA----IDLGAFMFYTFMLVPTG 229 >gi|293373984|ref|ZP_06620325.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f] gi|292631060|gb|EFF49697.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f] Length = 436 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 68/227 (29%), Gaps = 71/227 (31%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--HHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G D + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 + L+ I+D+ + LMR Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316 ++ E+ +++ + ++ G+ + ++ PG Sbjct: 268 --------------VSKEDTYQLIEQFRREVPGIHLRTTLMVGHPGE 300 >gi|284161609|ref|YP_003400232.1| radical SAM protein [Archaeoglobus profundus DSM 5631] gi|284011606|gb|ADB57559.1| Radical SAM domain protein [Archaeoglobus profundus DSM 5631] Length = 337 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 21/107 (19%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGD 153 +++L + +C C +C E + + ++ + I+E + + + TGG+ Sbjct: 30 KMVLFVTGICNNSCFYCPISEERRGKDVVFANEREVKRIEDAIEEANAMSAEGIAITGGE 89 Query: 154 PLILSHKRLQKVLKT------------------LRYIKHVQILRFHS 182 PL L R+ + LKT L +KH+ +RFH Sbjct: 90 PL-LKLDRVVEFLKTFKDLHSHLYTAIPAKESVLSKLKHLDEIRFHP 135 >gi|242239858|ref|YP_002988039.1| molybdenum cofactor biosynthesis protein A [Dickeya dadantii Ech703] gi|242131915|gb|ACS86217.1| molybdenum cofactor biosynthesis protein A [Dickeya dadantii Ech703] Length = 340 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 24/181 (13%) Query: 99 LKLLHVCPVYCRFCFRR-EMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L + VC C +C GS LS + E +V TGG+P + Sbjct: 29 LSITDVCNFRCTYCLPNGYQPNGSASSRFLSLDEIRRVSRAFAE-LGTEKVRLTGGEPSL 87 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 +++ +R H+ + R+ ++ + + + +++ + Sbjct: 88 RRDFV--EIIAAIRENPA-----IHTLAVTTNGYRLARDVARWREAGLTSLNVSVDSLDA 140 Query: 217 YEFSE--------EAIAAISRLANAGI-ILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 +F + + I + G + +VL++ IND +L +R + Sbjct: 141 RQFHAITGQDKFRQVMDGIDAAFDCGFSRVKVNTVLMRDINDS-----SLHTFLAWIRQR 195 Query: 268 P 268 P Sbjct: 196 P 196 >gi|327402650|ref|YP_004343488.1| 30S ribosomal protein S12P methylthiotransferase [Fluviicola taffensis DSM 16823] gi|327318158|gb|AEA42650.1| SSU ribosomal protein S12P methylthiotransferase [Fluviicola taffensis DSM 16823] Length = 437 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 45/110 (40%), Gaps = 14/110 (12%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEVI 148 K+ C C FC R + V + +++S + AA Q +I ++ Sbjct: 143 AYFKIAEGCDRPCSFCAIPLMRGKHVSTPMDQLVASAKSLAA----QGVKEILLIAQDLT 198 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 + G D I + L ++L L ++ ++ +R H P P + +++ Sbjct: 199 YYGLD--IYKKRNLAELLDQLAAVEGIEWIRLHYAFPAGFPMDVLDAMVK 246 >gi|299537543|ref|ZP_07050837.1| hypothetical protein BFZC1_16040 [Lysinibacillus fusiformis ZC1] gi|298727104|gb|EFI67685.1| hypothetical protein BFZC1_16040 [Lysinibacillus fusiformis ZC1] Length = 370 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +C + C C + ++ L E L + E + + TGG+P ++S Sbjct: 33 FTTTTLCNMRCAHCAVGYTLQNKDPEALP---IELILKRLDEIPHLKTLSITGGEP-MMS 88 Query: 159 HKRLQKVLKTLRYIKHVQILR 179 K +Q + L H + +R Sbjct: 89 KKSVQNYVLPLLKYAHERGVR 109 >gi|160939106|ref|ZP_02086457.1| hypothetical protein CLOBOL_04000 [Clostridium bolteae ATCC BAA-613] gi|158438069|gb|EDP15829.1| hypothetical protein CLOBOL_04000 [Clostridium bolteae ATCC BAA-613] Length = 459 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 10/109 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKG---TVLSSKDTEAALAYIQEKSQI-WEVIFTGG 152 LK+ C C +C + G + L + + A A ++E + E G Sbjct: 160 AFLKIAEGCDKRCTYCIIPYLRGPYRSVPIEQLVKEARQLAEAGVKELILVAQETTLYGR 219 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 D + K L ++L+ L I + +R P+ I ELI+ ++ Sbjct: 220 D--LYGEKCLPRLLRELAKIPGIYWIRIQ----YCYPEEITDELIETIR 262 >gi|124027074|ref|YP_001012394.1| Fe-S oxidoreductase [Hyperthermus butylicus DSM 5456] gi|123977768|gb|ABM80049.1| Fe-S oxidoreductase [Hyperthermus butylicus DSM 5456] Length = 264 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 35/68 (51%), Gaps = 3/68 (4%) Query: 104 VCPVYCRFCFRREM--VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C + CRFC+ G +G +LS + L + ++++ +V +GG+P + + Sbjct: 50 GCNLRCRFCWAWRFTWTGYGRGVLLSPDEAAERLMRLARRTRVRQVRLSGGEP-TVGWEH 108 Query: 162 LQKVLKTL 169 L +V++ + Sbjct: 109 LLEVMEAV 116 >gi|325660993|ref|ZP_08149620.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae bacterium 4_1_37FAA] gi|325472500|gb|EGC75711.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae bacterium 4_1_37FAA] Length = 440 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 31/117 (26%), Positives = 48/117 (41%), Gaps = 18/117 (15%) Query: 97 ILLKLLHVCPVYCRFC--------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 LK+ C +C +C FR V ++ + + E + + +Q E Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFRS--VPMEQLVHEAQELAEQGVKELILVAQ--ETT 201 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + K L K+LK L I ++ +R V P+ I ELIQ +KE K Sbjct: 202 LYGKD--LYGEKSLHKLLKELCKIAGIRWIR----VLYCYPEEITDELIQVMKEESK 252 >gi|311993060|ref|YP_004009926.1| anaerobic NTP reductase, small subunit [Enterobacteria phage CC31] gi|284177898|gb|ADB81564.1| anaerobic NTP reductase, small subunit [Enterobacteria phage CC31] Length = 161 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 20/82 (24%), Positives = 34/82 (41%), Gaps = 6/82 (7%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R++L + C C C+ + + GT + + E + + I + TGGDPL Sbjct: 18 RVVLFVTG-CLHKCEGCYNKSTWNPRNGTEFTGETIEEIRELLSKD-YIQGITLTGGDPL 75 Query: 156 ILSHKR--LQKVLKTLR-YIKH 174 R ++ +LK L H Sbjct: 76 Y-PDNRETIEALLKCLHNSHPH 96 >gi|257065789|ref|YP_003152045.1| thiamine biosynthesis protein ThiH [Anaerococcus prevotii DSM 20548] gi|256797669|gb|ACV28324.1| biotin and thiamin synthesis associated [Anaerococcus prevotii DSM 20548] Length = 472 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 46/117 (39%), Gaps = 5/117 (4%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117 E +L +E+ + + K + H+ Y +RI+L + C C +C Sbjct: 51 SHREAFVLLSCKEEDLNAEIFNLAKELKHKFYANRIVLFAPLYLSNYCVNGCSYCPYHGQ 110 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + LS ++ + +Q+ + G DP+ + + + + T+ IKH Sbjct: 111 NRTIPRRKLSQEEIREQVIALQDLGHKRLALEAGEDPVNNPLEYILESIDTIYNIKH 167 >gi|254511606|ref|ZP_05123673.1| radical SAM domain protein [Rhodobacteraceae bacterium KLH11] gi|221535317|gb|EEE38305.1| radical SAM domain protein [Rhodobacteraceae bacterium KLH11] Length = 317 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 27/158 (17%), Positives = 60/158 (37%), Gaps = 20/158 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGG 152 P+ + +C + C C+ + +++ + L IQE++ I E+ FTGG Sbjct: 34 PETLWFNTGTLCNIECVNCYIASSPTNDALVYITTDEVRDYLDQIQERNWPIREIGFTGG 93 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGKPVYI 209 +P ++ + + L V IL + P ++ L++ ++ + + Sbjct: 94 EPF-MNPQMIDMTRAALERGYEVLIL-----TNAMLPMMRRKMREGLLELQRDYADKLTL 147 Query: 210 AIHANHPY-EFSEE---------AIAAISRLANAGIIL 237 I +H E +E + + L + G + Sbjct: 148 RISVDHYRPELHDEERGKGSFAKTLTGMEWLRDNGFRM 185 >gi|94311377|ref|YP_584587.1| molybdenum cofactor biosynthesis protein A [Cupriavidus metallidurans CH34] gi|93355229|gb|ABF09318.1| molybdopterin biosynthesis protein A [Cupriavidus metallidurans CH34] Length = 395 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 24/130 (18%), Positives = 49/130 (37%), Gaps = 19/130 (14%) Query: 51 NPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 + D R +P + P + D PL + + + C C Sbjct: 31 DLRDHRYRSMVPSIPSHLVAPNGL---VADTRGRPLHDLR--------ISVTDRCNFRCV 79 Query: 111 FCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKV 165 +C +E+ +LS ++ E I + ++ TGG+PL+ K ++++ Sbjct: 80 YCMPKEVFDKDYTFLPHSELLSFEEIERTAR-IFVSQGVEKIRLTGGEPLL--RKNIERL 136 Query: 166 LKTLRYIKHV 175 ++ L I+ V Sbjct: 137 VEMLARIETV 146 >gi|282850512|ref|ZP_06259891.1| thiazole biosynthesis protein ThiH [Veillonella parvula ATCC 17745] gi|282580005|gb|EFB85409.1| thiazole biosynthesis protein ThiH [Veillonella parvula ATCC 17745] Length = 472 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y DRI+L + C C +C K L+ + ++ VI Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYI 172 +G DPL L+ +L++++ I Sbjct: 140 ESGEDPLNNP---LEYILESIKTI 160 >gi|149914119|ref|ZP_01902650.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. AzwK-3b] gi|149811638|gb|EDM71471.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. AzwK-3b] Length = 446 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 20/103 (19%), Positives = 34/103 (33%), Gaps = 20/103 (19%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIF---- 149 L + C +C FC V +S+ L +E + E+ Sbjct: 151 TAFLTVQEGCDKFCAFC-----VVPYTRGAEASRPAARILDEARELVDRGVREITLLGQN 205 Query: 150 ------TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 TG D S L +++ L I ++ +RF + P Sbjct: 206 VNAYHGTGPDG---SDWSLARLIWALDAIDGLERIRFTTSHPN 245 >gi|153005880|ref|YP_001380205.1| nitrogenase cofactor biosynthesis protein NifB [Anaeromyxobacter sp. Fw109-5] gi|152029453|gb|ABS27221.1| nitrogenase cofactor biosynthesis protein NifB [Anaeromyxobacter sp. Fw109-5] Length = 495 Score = 38.5 bits (89), Expect = 1.6, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 66/191 (34%), Gaps = 38/191 (19%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H + R+ + + C V C +C R+ G + LA E + Sbjct: 49 AHHHFARMHVAVAPACNVQCHYCNRKYDCANESRPGVVSERLRPEDAVRKVLAVAAELPE 108 Query: 144 IWEVIFTG-GDPLI---------------LSHKRLQKVLKTLRYIKHVQILRF-HSRVPI 186 + V G GD L RL L +H + L +R Sbjct: 109 LSVVGIAGPGDALANADATFATLEGVHRAAPDLRLCVSTNGLALPEHAERLAAAGARHVT 168 Query: 187 V-----DP---QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 V DP +RI P +++ ++ P S + + I+ LA G+++ Sbjct: 169 VTVNMIDPAVGERIYPWVLRGGRKVRGPEA-------SRILSAQQLEGIAALAARGVLVK 221 Query: 239 SQSVLLKGIND 249 SV++ G+ND Sbjct: 222 VNSVVIPGVND 232 >gi|317128167|ref|YP_004094449.1| coproporphyrinogen dehydrogenase [Bacillus cellulosilyticus DSM 2522] gi|315473115|gb|ADU29718.1| Coproporphyrinogen dehydrogenase [Bacillus cellulosilyticus DSM 2522] Length = 499 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 60/157 (38%), Gaps = 20/157 (12%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAY----- 137 + + + H + + + CP C +C + G S ++ L Y Sbjct: 163 AVVPDLDHIKNEVSIYIGIPFCPTMCAYCT---FPAYAINGKNGSVEEFLTGLHYEMEVT 219 Query: 138 ----IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 + ++ + + GG P ++ + + + + + + + +R + V P I+ Sbjct: 220 GTWLKERNIKVTTIYYGGGTPTSITAREMDALYEKMYQVFPMADVRELT-VEAGRPDTIS 278 Query: 194 PELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR 229 PE I+ LK+ + + P F+ E + AI R Sbjct: 279 PEKIEVLKKWNVDRISVN-----PQSFTNETLKAIGR 310 >gi|229816073|ref|ZP_04446394.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM 13280] gi|229808387|gb|EEP44168.1| hypothetical protein COLINT_03129 [Collinsella intestinalis DSM 13280] Length = 441 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 7/116 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI---FTGGDPL 155 L + HVC + C +CF + + ++ K AA+ Y+ S +V+ F GG+P+ Sbjct: 92 LHVAHVCNLGCDYCFAGKGNYGTQSLLMKEKVAYAAVDYLVHNSSKNDVLTIVFFGGEPM 151 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + ++ L H + RF + + +N I+ KE G + +++ Sbjct: 152 L--NEPLIWKTVDYAESAHPKR-RF-TYSITTNGTLLNDRAIEAFKEHGFSILVSL 203 >gi|115374433|ref|ZP_01461715.1| radical SAM:Molybdenum cofactor synthesis C-terminal [Stigmatella aurantiaca DW4/3-1] gi|115368525|gb|EAU67478.1| radical SAM:Molybdenum cofactor synthesis C-terminal [Stigmatella aurantiaca DW4/3-1] Length = 362 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 5/84 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C +C K +LS+ + E ++ I V TGG+PLI Sbjct: 32 LSVTDRCNFRCTYC--SPASWGGKKDLLSALEFERIVSVFASM-GIQRVRLTGGEPLIRP 88 Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182 + ++ + L + V+ + + Sbjct: 89 D--ILEIAQRLSALPGVERVAITT 110 >gi|32472889|ref|NP_865883.1| molybdopterin cofactor synthesis protein A [Rhodopirellula baltica SH 1] gi|81661860|sp|Q7UT69|MOAA_RHOBA RecName: Full=Molybdenum cofactor biosynthesis protein A gi|32444126|emb|CAD73568.1| molybdopterin cofactor synthesis protein A [Rhodopirellula baltica SH 1] Length = 359 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 38/88 (43%), Gaps = 3/88 (3%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R D + + + C + C +C + VL+ ++ E + ++ + ++ T Sbjct: 36 RRHDSLRISITDRCNIRCFYCMPEHDAEFLPRSGVLTFEEIERLAGLLVKRCGVRDIRIT 95 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178 GG+PL+ +++ L I ++ L Sbjct: 96 GGEPLVRRDCV--DLIRMLARIDGLEDL 121 >gi|291165575|gb|EFE27624.1| radical SAM domain protein [Filifactor alocis ATCC 35896] Length = 373 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 19/126 (15%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIF 149 + + CP C FC +R++ G + +S E L+ +E + F Sbjct: 8 KKITIPIFVPHKGCPNDCVFCNQRKITGMTEEMTVSRAKATIEEFLSEKREDAFYEIAFF 67 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKH-------VQILRFHSRVPIVDPQRINPELIQCLKE 202 G I +R++ L + H V+ +R +R P I+ +++ L++ Sbjct: 68 GGSFTAISDARRVE-----LLQLAHQYILSGEVKSVRISTR-----PDAIDEMILEELQQ 117 Query: 203 AGKPVY 208 G V Sbjct: 118 YGVQVI 123 >gi|257063155|ref|YP_003142827.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] gi|256790808|gb|ACV21478.1| Fe-S oxidoreductase [Slackia heliotrinireducens DSM 20476] Length = 293 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 6/88 (6%) Query: 94 PDRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTG 151 P LL++ C C+FC M + + +D EA LA ++ + Sbjct: 14 PTWPLLEVTQGCTHNKCKFCT---MYKGVRFDLRPLEDIEADLAELRSTVPHARTIQLLS 70 Query: 152 GDPLILSHKRLQKVLKTL-RYIKHVQIL 178 +PL L + R + +L+ + Y+ ++ + Sbjct: 71 ANPLALPYSRFKPILEKINEYLPDIEFV 98 >gi|239825986|ref|YP_002948610.1| YfkB-like domain protein [Geobacillus sp. WCH70] gi|239806279|gb|ACS23344.1| YfkB-like domain protein [Geobacillus sp. WCH70] Length = 374 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 43/119 (36%), Gaps = 16/119 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +C + C C + ++ L + + ++E + + TGG+P +LS Sbjct: 35 FTTTTLCNMRCEHCAVGYTLQTKDPEALP---LDLLIQRLEEIPHLRSLSITGGEP-MLS 90 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215 K + + L H + +R ++N L L K P +H +H Sbjct: 91 LKSVNNYVVPLLKYAHERGVR----------TQLNSNLTLELDRYEKIIPYLDVLHISH 139 >gi|149923413|ref|ZP_01911818.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase [Plesiocystis pacifica SIR-1] gi|149815720|gb|EDM75246.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase [Plesiocystis pacifica SIR-1] Length = 298 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 55/166 (33%), Gaps = 38/166 (22%) Query: 97 ILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----------- 144 +L+++ C C +C + KD A I E + Sbjct: 17 LLIQVTLGCSHNRCVYC------DMYRDKRFRPKDWGQVEADIIEAGAMGRRPGRRGFRS 70 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFH----SRVPIVDPQRINPELIQC 199 +V GD LIL +RL ++L +R + V+ R +R R + E + Sbjct: 71 TKVFLCDGDALILPTRRLLQILAAIREHLPWVE--RVGSYGDTRSV----GRKSVEELTA 124 Query: 200 LKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGII 236 L+EAG + E E I +L AG+ Sbjct: 125 LREAGLGIVYHGMETGDAEVLERIDKGGTRPELIETADKLRAAGVQ 170 >gi|49184749|ref|YP_028001.1| coenzyme PQQ synthesis protein [Bacillus anthracis str. Sterne] gi|49178676|gb|AAT54052.1| coenzyme PQQ synthesis protein, putative [Bacillus anthracis str. Sterne] Length = 378 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 10 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 65 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 66 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 116 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H + + AI L I + +V+ D E +A L+ Sbjct: 117 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 176 Query: 261 F 261 Sbjct: 177 L 177 >gi|30261914|ref|NP_844291.1| coenzyme PQQ synthesis protein, putative [Bacillus anthracis str. Ames] gi|47527167|ref|YP_018516.1| coenzyme PQQ synthesis protein [Bacillus anthracis str. 'Ames Ancestor'] gi|165869387|ref|ZP_02214046.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0488] gi|167633400|ref|ZP_02391725.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0442] gi|167638757|ref|ZP_02397032.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0193] gi|170707334|ref|ZP_02897789.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0389] gi|177650509|ref|ZP_02933476.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0174] gi|190566409|ref|ZP_03019327.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis Tsiankovskii-I] gi|227815307|ref|YP_002815316.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. CDC 684] gi|229600588|ref|YP_002866287.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0248] gi|254684473|ref|ZP_05148333.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. CNEVA-9066] gi|254724000|ref|ZP_05185786.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A1055] gi|254734776|ref|ZP_05192488.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. Western North America USA6153] gi|254741178|ref|ZP_05198866.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. Kruger B] gi|254755429|ref|ZP_05207463.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. Vollum] gi|254759966|ref|ZP_05211990.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. Australia 94] gi|30256540|gb|AAP25777.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. Ames] gi|47502315|gb|AAT30991.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. 'Ames Ancestor'] gi|164714827|gb|EDR20345.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0488] gi|167513221|gb|EDR88592.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0193] gi|167531438|gb|EDR94116.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0442] gi|170127833|gb|EDS96705.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0389] gi|172083653|gb|EDT68713.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0174] gi|190562544|gb|EDV16511.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis Tsiankovskii-I] gi|227007826|gb|ACP17569.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. CDC 684] gi|229264996|gb|ACQ46633.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0248] Length = 377 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 64 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 65 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 115 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H + + AI L I + +V+ D E +A L+ Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 175 Query: 261 F 261 Sbjct: 176 L 176 >gi|77408017|ref|ZP_00784766.1| radical SAM domain protein protein [Streptococcus agalactiae COH1] gi|77173379|gb|EAO76499.1| radical SAM domain protein protein [Streptococcus agalactiae COH1] Length = 315 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 2/71 (2%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +++ L C C C + S L+ ++ EA + Y + + V TGG+ L+ Sbjct: 4 LVINLSQKCNAKCDHCCFSCLPNSVN--CLTDEEIEAVVRYAETHEDVELVSLTGGEALL 61 Query: 157 LSHKRLQKVLK 167 K L+ + + Sbjct: 62 RKSKVLETIHR 72 >gi|222100278|ref|YP_002534846.1| Biotin synthetase [Thermotoga neapolitana DSM 4359] gi|221572668|gb|ACM23480.1| Biotin synthetase [Thermotoga neapolitana DSM 4359] Length = 307 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R +++ +VC C +C R + K ++ ++ + V+ +G DP Sbjct: 13 RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIIERAKLAVQFGAKTIVLQSGEDPY 72 Query: 156 ILSHKRLQKVLKTLRYI 172 + + +++ ++ + Sbjct: 73 YMPD-VISDIVREIKKM 88 >gi|188588968|ref|YP_001921205.1| thiamine biosynthesis protein ThiH [Clostridium botulinum E3 str. Alaska E43] gi|188499249|gb|ACD52385.1| putative thiazole biosynthesis protein [Clostridium botulinum E3 str. Alaska E43] Length = 472 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 5/117 (4%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREM 117 E IL E D H K I + Y +RI+ L L + C C +C Sbjct: 49 SHREAAILLECDLDEEIQKIHDLAKEIKQKFYGNRIVMFAPLYLSNYCVNGCTYCPYHHQ 108 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 L+ ++ + + +Q+ + TG DP+ + + + +KT+ IKH Sbjct: 109 NKHISRKKLTQEEIKREVIALQDMGHKRLALETGEDPINNPIEYVLESIKTIYSIKH 165 >gi|170766823|ref|ZP_02901276.1| putative coproporphyrinogen III oxidase [Escherichia albertii TW07627] gi|170124261|gb|EDS93192.1| putative coproporphyrinogen III oxidase [Escherichia albertii TW07627] Length = 419 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 45/109 (41%), Gaps = 8/109 (7%) Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148 R++ + C +C FC F + + ++ E A + + + + I V Sbjct: 30 RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIELEADSVLHQSAPIHAVY 89 Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 F GG P LS + L +++ TLR + + RV D +RI+ Sbjct: 90 FGGGTPSALSARDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138 >gi|145588575|ref|YP_001155172.1| molybdenum cofactor biosynthesis protein A [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] gi|145046981|gb|ABP33608.1| GTP cyclohydrolase subunit MoaA [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1] Length = 371 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 12/88 (13%) Query: 94 PDRIL----LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI 144 R+L + + C C +C F + +LS ++ L I + Sbjct: 35 RGRVLRDLRISVTDRCNFRCTYCMPKEVFDQNYPYLAHQELLSFEEITR-LTSIFSSLGV 93 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYI 172 ++ TGG+PL+ K L+ +++ L I Sbjct: 94 EKIRLTGGEPLL--RKNLEILIEMLAKI 119 >gi|154174577|ref|YP_001408011.1| aspartate kinase [Campylobacter curvus 525.92] gi|112803284|gb|EAU00628.1| asparate kinase, monofunctional class [Campylobacter curvus 525.92] Length = 399 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 23/166 (13%) Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 IFT D + + R++K K L + + ++L S V R ++ K+ + Sbjct: 170 IFTDVDGVYTTDPRIEKRAKKLEKVSYDEMLELASAGAKVLQNR----SVELAKKLNVKL 225 Query: 208 YIAIHANHPYEFSEEAIAA-ISRLANAGIIL-LSQS-VLLKGINDDPEILANLMRTFVEL 264 NH E + + + +GI L +Q+ V L+G+ D P I A + + Sbjct: 226 VTRSSFNH-NEGTLIVKEEDMEAVLVSGIALDKNQARVTLRGVVDKPGIAAEIFTALAKK 284 Query: 265 RIKPYYLHHPDL-AAGTSH-------FRLTIEEGQKIVASLKEKIS 302 I + D+ H F + E ++ +K+S Sbjct: 285 NI------NVDMIIQNVGHDGTTNLGFTVPQNE-LELAKETMQKLS 323 >gi|332993820|gb|AEF03875.1| molybdenum cofactor biosynthesis protein A [Alteromonas sp. SN2] Length = 322 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 21/178 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C++C G LS + L+ +V TGG+P L Sbjct: 15 LSVTEACNFRCQYCLPDGYQGPSSEHFLSLGEINTLLSAFSG-LGTSKVRLTGGEP-TLR 72 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 L +L ++ + + R+ + V ++I + P + Sbjct: 73 RDFLD-ILSATANTPGIKRVAMTTHG-----GRMAEHAAAWKQAGLHQVNVSIDSLDPRQ 126 Query: 219 FSE--------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 F+ + +A + AG+ + SVLL +D A L R L+ P Sbjct: 127 FAAITGQDKLKQVLAGLDAAVEAGLDVKVNSVLLNDFSD-----ARLNRFLDWLKTMP 179 >gi|317179320|dbj|BAJ57108.1| hypothetical protein HPF30_1011 [Helicobacter pylori F30] Length = 418 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|317012127|gb|ADU82735.1| hypothetical protein HPLT_01465 [Helicobacter pylori Lithuania75] Length = 418 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|308061638|gb|ADO03526.1| hypothetical protein HPCU_01755 [Helicobacter pylori Cuz20] Length = 418 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|298736768|ref|YP_003729298.1| hypothetical protein HPB8_1277 [Helicobacter pylori B8] gi|298355962|emb|CBI66834.1| conserved hypothetical protein [Helicobacter pylori B8] Length = 418 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|254778988|ref|YP_003057093.1| putative MiaB-like tRNA modifying enzyme [Helicobacter pylori B38] gi|254000899|emb|CAX28835.1| Putative MiaB-like tRNA modifying enzyme [Helicobacter pylori B38] Length = 418 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|224026389|ref|ZP_03644755.1| hypothetical protein BACCOPRO_03145 [Bacteroides coprophilus DSM 18228] gi|224019625|gb|EEF77623.1| hypothetical protein BACCOPRO_03145 [Bacteroides coprophilus DSM 18228] Length = 438 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 7/120 (5%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C G + + +A A + +I GD Sbjct: 148 RTRYFLKVQDGCDYFCSYCTIPFARGRSRNGKIEDLVAQARQAAAEGGKEIVLTGVNIGD 207 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + + ++K L ++ ++ R S ++P + E+I+ + + H Sbjct: 208 FGKTTGETFFDLVKALDQVEGIERFRISS----IEPNLLTDEIIEYVAHSR---AFMPHF 260 >gi|217031506|ref|ZP_03437011.1| hypothetical protein HPB128_21g64 [Helicobacter pylori B128] gi|216946706|gb|EEC25302.1| hypothetical protein HPB128_21g64 [Helicobacter pylori B128] Length = 398 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 113 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 167 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 168 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 201 >gi|208434231|ref|YP_002265897.1| hypothetical protein HPG27_264 [Helicobacter pylori G27] gi|208432160|gb|ACI27031.1| hypothetical protein HPG27_264 [Helicobacter pylori G27] Length = 418 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|108562712|ref|YP_627028.1| hypothetical protein HPAG1_0287 [Helicobacter pylori HPAG1] gi|107836485|gb|ABF84354.1| hypothetical protein HPAG1_0287 [Helicobacter pylori HPAG1] Length = 418 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|15644913|ref|NP_207083.1| hypothetical protein HP0285 [Helicobacter pylori 26695] gi|2501536|sp|P56130|Y285_HELPY RecName: Full=Putative methylthiotransferase HP_0285 gi|2313381|gb|AAD07353.1| conserved hypothetical protein [Helicobacter pylori 26695] Length = 418 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|294792135|ref|ZP_06757283.1| putative ThiH protein [Veillonella sp. 6_1_27] gi|294457365|gb|EFG25727.1| putative ThiH protein [Veillonella sp. 6_1_27] Length = 482 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y DRI+L + C C +C K L+ + ++ VI Sbjct: 90 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQDQIREEVIALEAMGHKRIVI 149 Query: 149 FTGGDPLILSHKRLQKVLKTLRYI 172 +G DPL L+ +L++++ I Sbjct: 150 ESGEDPLNNP---LEYILESIKTI 170 >gi|225874256|ref|YP_002755715.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196] gi|225792393|gb|ACO32483.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196] Length = 374 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 4/64 (6%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 P + ++ CP+ CR C R E V L+ ++ L I + +I TG Sbjct: 23 PMIVYWEMTQACPLACRHC-RAEAVTMPHPCELNYDESRDLLRQIAAFGDPKPH-LILTG 80 Query: 152 GDPL 155 GDPL Sbjct: 81 GDPL 84 >gi|255102210|ref|ZP_05331187.1| radical SAM-family protein [Clostridium difficile QCD-63q42] Length = 475 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 59/146 (40%), Gaps = 20/146 (13%) Query: 92 RYP--DRI---LLKLLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKS-- 142 +Y +R+ +L++ C ++C +C + +S + + + Y+ S Sbjct: 79 KYHCENRVEGIILQVTQNCNLHCDYCTYSGGYINRIHTNKRMSKETAKRGIDYLISHSRD 138 Query: 143 -QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHV--QILRFHSRVPIVDPQRINPELIQC 199 Q + F GG+PL L ++ ++ ++ + L++ + I E+I+ Sbjct: 139 CQYVSIGFYGGEPL-LEFDLIKWCIE--YSKANIEGKNLKY---NLTTNATLITEEIIEL 192 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIA 225 +E V I I + P E ++ Sbjct: 193 FEE--NNVSIMISLDGPAEIHDKNRK 216 >gi|149203904|ref|ZP_01880872.1| radical SAM domain protein [Roseovarius sp. TM1035] gi|149142346|gb|EDM30391.1| radical SAM domain protein [Roseovarius sp. TM1035] Length = 321 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 59/156 (37%), Gaps = 14/156 (8%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTG 151 +P+ + +C + CR C+ + +S + L ++ + + E+ FTG Sbjct: 37 HPETLWFNTGTLCNIECRNCYILSSPSNDALVYISESEVRDYLGQVRARGWPLREIAFTG 96 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 G+P ++ + + L V IL R + R L+ K G+ + + I Sbjct: 97 GEPF-MNPEMIGMARAALEAGFEVLILTNAMRPMMRKTMR--AGLLDLGKTWGEKLTLRI 153 Query: 212 HANHPYE-FSEEAIAA---------ISRLANAGIIL 237 +H E +E A + L + GI + Sbjct: 154 SVDHWSEALHDEERGAGAFAKTLEGMCWLRDNGIRM 189 >gi|148655095|ref|YP_001275300.1| radical SAM domain-containing protein [Roseiflexus sp. RS-1] gi|148567205|gb|ABQ89350.1| Radical SAM domain protein [Roseiflexus sp. RS-1] Length = 367 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 22/111 (19%), Positives = 40/111 (36%), Gaps = 18/111 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----VIFTGGDP 154 ++ C + CR C M + E ++ ++++ + +I TGGDP Sbjct: 27 WEMTQACALACRHCRAEAMPHPHPLQL----SFEESVRFLRQIPDFGDPMPQLILTGGDP 82 Query: 155 LILSHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 L L ++ R + V I P P + ++ LK G Sbjct: 83 LARPD--LLDLIDAARALGVPVSI------TPSATPN-LTRTMLAALKAHG 124 >gi|159042455|ref|YP_001541707.1| radical SAM domain-containing protein [Caldivirga maquilingensis IC-167] gi|157921290|gb|ABW02717.1| Radical SAM domain protein [Caldivirga maquilingensis IC-167] Length = 382 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 36/194 (18%), Positives = 74/194 (38%), Gaps = 39/194 (20%) Query: 93 YPDRILLK---LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI- 148 Y R LL CP+ CR C R + LS+ + + + + E + V+ Sbjct: 5 YSQRPLLVFWETTKACPLSCRHC-RANAILKPLPGELSTDEGKRLIEQLPEFGKPTPVLI 63 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI--QCLKEAGKP 206 TGGDPL+ + +++ + + VP+ ++ +L+ + E + Sbjct: 64 LTGGDPLMRED--IFELIDYAKSLN----------VPVAVSPTVSEKLLSDNVIDELRRV 111 Query: 207 VYIA---------IH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE 252 ++ H N +E + + AIS L AG+ + + +K + Sbjct: 112 SSVSVSLDGASPTTHEYIRNRNGVFELT---LKAISSLLKAGVKVQVNTTFMKL---NVH 165 Query: 253 ILANLMRTFVELRI 266 L +++ +L + Sbjct: 166 ELPLIVKVLKDLGV 179 >gi|88856676|ref|ZP_01131332.1| MoaA-related protein [marine actinobacterium PHSC20C1] gi|88814137|gb|EAR24003.1| MoaA-related protein [marine actinobacterium PHSC20C1] Length = 336 Score = 38.5 bits (89), Expect = 1.7, Method: Composition-based stats. Identities = 18/97 (18%), Positives = 37/97 (38%), Gaps = 8/97 (8%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 E + DP+ + L G R+ + C + C +C R +++ Sbjct: 56 TAHEATVRHGRAPDPLAGIDPDQLPG------TRLWMYTNFDCNLACDYCCVRSSPQTER 109 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 + + + A ++ + E+I TGG+P +L Sbjct: 110 RALGVDRVAQLAAEAVEA--GVKELILTGGEPFLLPD 144 >gi|325300681|ref|YP_004260598.1| Radical SAM domain-containing protein [Bacteroides salanitronis DSM 18170] gi|324320234|gb|ADY38125.1| Radical SAM domain protein [Bacteroides salanitronis DSM 18170] Length = 545 Score = 38.2 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 46/246 (18%), Positives = 74/246 (30%), Gaps = 46/246 (18%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L+ C C FC G + L + ++ IQE I + Sbjct: 179 VQLETTRGCFNTCAFCVSG---GEKPVRTLPIETIRRRISLIQEH-YIRNIRVLDR-TFN 233 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 + + + +L R +RFH V P ++ EL + L K +H Sbjct: 234 YNTRHARALLDLFREFP---DIRFHLE---VHPALLSEELKEILAAMPKG---QLH---- 280 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDL 276 AGI L Q VL ++ LA+ + L P H DL Sbjct: 281 --------------LEAGIQSLHQEVLT--VSRRAGDLADALSGLEFLCALPNLETHADL 324 Query: 277 AAGTSHFRL--------TIE--EGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHN 326 AG + L T+ +I + + G +L Y + Sbjct: 325 IAGLPLYHLKEIFDDVRTLASYRAGEIQLESLKLLPGTEMRRRSPELSISYS--PFPPYE 382 Query: 327 IKKVGN 332 + K Sbjct: 383 VLKTNE 388 >gi|323496777|ref|ZP_08101822.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326] gi|323318202|gb|EGA71168.1| coproporphyrinogen III oxidase [Vibrio sinaloensis DSM 21326] Length = 457 Score = 38.2 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 23/133 (17%) Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPD-------RILLKLLHVCP 106 DP+ R PQK+ + PI ++ + Y R L + C Sbjct: 18 DPL-RYAFPQKK--SAHAGGMASPIP--PDQKVEILSRLYDQQGQKSAKRCLYIHIPFCR 72 Query: 107 VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--------IWEVIFTGGDPLILS 158 V C FC + L EA + I +K+ V GG P LS Sbjct: 73 VRCTFC---NFFQNAASRKLVDDYFEALMIEIAQKAAQPWTQTGLFHAVYIGGGTPTDLS 129 Query: 159 HKRLQKVLKTLRY 171 ++++++ K +R Sbjct: 130 AEQVERLGKAIRR 142 >gi|313125740|ref|YP_004036010.1| miab-like tRNA modifying enzyme [Halogeometricum borinquense DSM 11551] gi|312292105|gb|ADQ66565.1| MiaB-like tRNA modifying enzyme [Halogeometricum borinquense DSM 11551] Length = 417 Score = 38.2 bits (88), Expect = 1.7, Method: Composition-based stats. Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 9/113 (7%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 +L + C C +C + + + ++ E A A + + E+ TG D + Sbjct: 126 ILPIARGCMSNCSYCITK-FATGRVDSPPVEENVEKARALV--HAGAKEIRITGQDTGVY 182 Query: 158 ----SHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 ++L ++L + I+ +R P I+ EL++ K Sbjct: 183 GWDKGDRKLPELLDRICSEIEGDFRVRLGMANPGGI-HGIHEELVEVFDRHDK 234 >gi|329942551|ref|ZP_08291361.1| radical SAM superfamily protein [Chlamydophila psittaci Cal10] gi|332287182|ref|YP_004422083.1| radical SAM domain protein [Chlamydophila psittaci 6BC] gi|313847779|emb|CBY16769.1| conserved hypothetical protein [Chlamydophila psittaci RD1] gi|325506991|gb|ADZ18629.1| radical SAM domain protein [Chlamydophila psittaci 6BC] gi|328815461|gb|EGF85449.1| radical SAM superfamily protein [Chlamydophila psittaci Cal10] gi|328914429|gb|AEB55262.1| conserved hypothetical protein TIGR00423 [Chlamydophila psittaci 6BC] Length = 370 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 24/89 (26%), Gaps = 9/89 (10%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y L + C C FC G KG + + ++ I E GG Sbjct: 66 YSSTFYLYPTNFCEFNCTFCAFYAKPGDAKGWFHTPDQLIEKIRELEV--PITETHIVGG 123 Query: 153 DPLILSHKRLQKVLKTLRYI----KHVQI 177 L + I H+ I Sbjct: 124 ---CFPDCNLDYYTELFSKIKTNFPHIHI 149 >gi|293609283|ref|ZP_06691585.1| molybdopterin biosynthesis protein [Acinetobacter sp. SH024] gi|292827735|gb|EFF86098.1| molybdopterin biosynthesis protein [Acinetobacter sp. SH024] Length = 346 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 15/160 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C K +LS + +++ ++ I + TGG+PL+ Sbjct: 29 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALIQFCSFMVQQ-GIESIRITGGEPLM-- 85 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216 + + ++ L+ +K + + R + + Q LK+AG + I++ + P Sbjct: 86 RQGIVHFVRDLQALKALGLKRIS----MTTNGHYLAKYAQQLKDAGLDDLNISLDSLDPI 141 Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + E + I +AG+ VL+K NDD Sbjct: 142 QFKELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDD 181 >gi|295677633|ref|YP_003606157.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. CCGE1002] gi|295437476|gb|ADG16646.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Burkholderia sp. CCGE1002] Length = 461 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 46/142 (32%), Gaps = 30/142 (21%) Query: 91 HRYPDRI-----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQ 143 H P R+ + ++ C YC +C V S+ + L I Sbjct: 138 HLPPARVEGPSAFVSIMEGCSKYCSYC-----VVPYTRGEEVSRPLDDVLTEIAGLADQG 192 Query: 144 IWEVIFTGGD----------PLILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQ 190 + EV G + L L + +++ + I ++ +R+ + P+ Sbjct: 193 VREVTLLGQNVNAYRGKFGGALTLGSTEIADFATLIEYVADIPGIERIRYTTSH----PK 248 Query: 191 RINPELIQCLKEAGKPVYIAIH 212 LI + K + +H Sbjct: 249 EFTQRLIDTYAKVPK-LVSHLH 269 >gi|226314357|ref|YP_002774253.1| hypothetical protein BBR47_47720 [Brevibacillus brevis NBRC 100599] gi|226097307|dbj|BAH45749.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599] Length = 367 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 8/74 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156 + +VC +C+FC R G + +S ++ L Y++ I E GG Sbjct: 67 INPTNVCEAHCKFCGFRRDEGDEGAYTMSMEEL---LHYVETRFHPGIREFHIVGG---H 120 Query: 157 LSHKRLQKVLKTLR 170 HK + L TLR Sbjct: 121 NQHKPFEYYLDTLR 134 >gi|205372586|ref|ZP_03225397.1| hypothetical protein Bcoam_03785 [Bacillus coahuilensis m4-4] Length = 375 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 4/83 (4%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L E L+ + E + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLTPKDPNALP---IELLLSRLDEIQDLRSLSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILR 179 LS K +++ + L H + +R Sbjct: 90 LSKKSVEQYVLPLLQYSHSRGVR 112 >gi|77920081|ref|YP_357896.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380] gi|77546164|gb|ABA89726.1| Fe-S oxidoreductase [Pelobacter carbinolicus DSM 2380] Length = 609 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 34/174 (19%), Positives = 59/174 (33%), Gaps = 25/174 (14%) Query: 77 PIGDNNHSPLKGIV-----HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 P+ D P + RYP +L +L CP C FCF GS K + Sbjct: 166 PVTDLATLPSPFLTGLLPPERYPG-LLWELSRGCPFRCDFCFESR--GSDKVRRFPPERL 222 Query: 132 EAALAYIQEKSQIWEVIFTGGDP-LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ 190 A L + + ++ DP + +++L+ + + R + Sbjct: 223 RAELESFAA-AGVRQLFV--LDPTFNYHQPQAKQMLRMMAELAPEIHYTIEVRA-----E 274 Query: 191 RINPELIQCLKEAGKPVYIAIHANHP-------YEFSEE-AIAAISRLANAGII 236 I+ E+ + + I + + P +F E I L AG+I Sbjct: 275 FIDEEMAGLFADINCALQIGLQSADPAVLARVHRQFDAEDFTERILLLHEAGVI 328 >gi|229090888|ref|ZP_04222116.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-42] gi|228692497|gb|EEL46228.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-42] Length = 383 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 121 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H + + AI L I + +V+ D E +A L+ Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 181 Query: 261 F 261 Sbjct: 182 L 182 >gi|282882002|ref|ZP_06290643.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus lacrimalis 315-B] gi|281298032|gb|EFA90487.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Peptoniphilus lacrimalis 315-B] Length = 467 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 47/125 (37%), Gaps = 16/125 (12%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW 145 G Y + + +++ C +C FC + S++ + + I+ Sbjct: 168 GANRLYSYKSYVNIMYGCNNFCTFC-----IVPYTRGREKSREADEIVDEIKSLIDKGSK 222 Query: 146 EVIFTGGDP-----LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 E+ G + + + ++L + IK V+ +RF + P+ I+ ELI Sbjct: 223 EITLLGQNVNSYGRGLENKTSFAQLLYRINDIKGVERIRFMTSH----PKDISDELIYAF 278 Query: 201 KEAGK 205 ++ Sbjct: 279 RDLDH 283 >gi|119872753|ref|YP_930760.1| radical SAM domain-containing protein [Pyrobaculum islandicum DSM 4184] gi|119674161|gb|ABL88417.1| Radical SAM domain protein [Pyrobaculum islandicum DSM 4184] Length = 298 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 31/181 (17%), Positives = 59/181 (32%), Gaps = 38/181 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLI- 156 + C C +C+ + + E +++ + V + DP Sbjct: 27 VNPYTGCGHGCLYCYITSYISNAFNPRPKEDLVEKIRRDLEKIPRGSIVALSNSSDPYTP 86 Query: 157 ------LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 L+ K LQ +L+ +++ ++ P+V + V + Sbjct: 87 PEATLGLTRKVLQILLERGY-----KVI-ITTKSPLVL------RDLDIFTRNRGRVVVQ 134 Query: 211 IHANHPYE-----FSEEA------IAAISRLANAGIILLSQSV----LLKGINDDPEILA 255 I E A + A+ RLA+ GI + SV L+ INDD + + Sbjct: 135 ITITTLREDLAAVLEPRAPRPAGRLEAVRRLASVGIPV---SVRLDPLIPYINDDIDNIE 191 Query: 256 N 256 Sbjct: 192 E 192 >gi|147678122|ref|YP_001212337.1| Fe-S-cluster redox protein [Pelotomaculum thermopropionicum SI] gi|205829798|sp|A5D1B6|RLMN_PELTS RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|146274219|dbj|BAF59968.1| predicted Fe-S-cluster redox enzyme [Pelotomaculum thermopropionicum SI] Length = 368 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 38/193 (19%), Positives = 66/193 (34%), Gaps = 35/193 (18%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVI 148 H Y + + + C + CRFC +G + + + L I+ +I V+ Sbjct: 114 HAYGNSVCVSTQAGCRMGCRFCASA--LGGLTRNLSPGEIYDQVLG-IRRDTGERISSVV 170 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQI---LRFHSRVPIVDPQRINPELIQCLK---- 201 L+ S + L TL +IK+V L R V L+ ++ Sbjct: 171 ------LMGSGEPLDNYDATLTFIKNVTAPYGLHIGCRHITVS----TCGLVPGIRRLAR 220 Query: 202 -EAGKPVYIAIH------------ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 + + +++H N Y +E A G + + LL G+N Sbjct: 221 EKLALTLAVSLHAPNDRLRDILVPVNRKYPLTELMAACRDYAQETGRRVTFEYALLAGVN 280 Query: 249 DDPEILANLMRTF 261 D E L+R Sbjct: 281 DRKEHAEELVRLL 293 >gi|18312397|ref|NP_559064.1| hypothetical protein PAE1082 [Pyrobaculum aerophilum str. IM2] gi|18159850|gb|AAL63246.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2] Length = 295 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 26/184 (14%), Positives = 59/184 (32%), Gaps = 22/184 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLIL 157 L C C +C+ + + +++ + V + DP Sbjct: 27 LNPYTGCGHGCLYCYITSYIPDAFNPRPKEDLLDKVRRDLEKIPKGAVVSLSNSSDPYTP 86 Query: 158 SHKRLQKVLKTLRYIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 RL + + + + + + ++ P+V + + V + I Sbjct: 87 PEARLG-LTRRVLQMLLERGYKVLIVTKSPLVL------RDLDIFQRHRGRVAVQITITT 139 Query: 216 PYE-----FSEEA------IAAISRLANAGIILLSQS-VLLKGINDDPEILANLMRTFVE 263 E A + A+ RL+ AG+ + + L+ +NDD + + ++ E Sbjct: 140 LREELASVLEPGAPRPAGRLDAVRRLSEAGVPVAVRLDPLIPLLNDDVDNIEEVVSKAAE 199 Query: 264 LRIK 267 K Sbjct: 200 AGAK 203 >gi|262279390|ref|ZP_06057175.1| molybdopterin biosynthesis protein [Acinetobacter calcoaceticus RUH2202] gi|262259741|gb|EEY78474.1| molybdopterin biosynthesis protein [Acinetobacter calcoaceticus RUH2202] Length = 346 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 60/163 (36%), Gaps = 21/163 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C K +L + ++ + + + TGG+PL+ Sbjct: 29 ISVTDRCNFKCVYCMPEHPEWLNKQDLLGFEALFQFCHFMVQH-GVESIRITGGEPLM-- 85 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYI----AI 211 + + ++ L+ +K + + R + + + LK+AG + + AI Sbjct: 86 RQGIVHFVRELQALKALGLKRIS----MTTNGHYLAKYARQLKDAGLDDLNISLDSLDAI 141 Query: 212 HANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + E + I + G+ VL+K NDD Sbjct: 142 QF---KELTKKKLEPVLEGIQAAKDVGLPFKINCVLMKNKNDD 181 >gi|315497432|ref|YP_004086236.1| molybdenum cofactor biosynthesis protein a [Asticcacaulis excentricus CB 48] gi|315415444|gb|ADU12085.1| molybdenum cofactor biosynthesis protein A [Asticcacaulis excentricus CB 48] Length = 337 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 6/95 (6%) Query: 87 KGIVHRYPDR---ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 ++ Y R + + + C + C +C + +LS ++ E L+ Sbjct: 5 PALIDAYHRRISYVRISVTDRCDLRCTYCMSERQTFLPRENLLSFEELER-LSLFLIDQG 63 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + TGG+PL+ + + LK L H L Sbjct: 64 VTRLRITGGEPLV--RRGILDFLKRLGAQVHEGRL 96 >gi|229824989|ref|ZP_04451058.1| hypothetical protein GCWU000182_00338 [Abiotrophia defectiva ATCC 49176] gi|229790992|gb|EEP27106.1| hypothetical protein GCWU000182_00338 [Abiotrophia defectiva ATCC 49176] Length = 435 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 8/67 (11%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEVIF 149 DRI + L + C + C++C+ ++ +K +L+ + + Y+ + + V F Sbjct: 90 DRIEIMLTNTCNLSCKYCYAKDGTYGRKPRILNENEI---IKYLNALFPIKYNYVNTVFF 146 Query: 150 TGGDPLI 156 GG+PL+ Sbjct: 147 FGGEPLL 153 >gi|229495505|ref|ZP_04389238.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Porphyromonas endodontalis ATCC 35406] gi|229317488|gb|EEN83388.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Porphyromonas endodontalis ATCC 35406] Length = 166 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 11/95 (11%) Query: 87 KGIVH---RYPDRILLKLL-------HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 KG++H RY + I C +C C E G LS + + Sbjct: 10 KGMLHLLNRYKETISDGPGLRYAIYLAGCSHHCPGCHNPESHNPLGGIELSEEVLRGIID 69 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 I + + +GGDP + L+ +++ L Sbjct: 70 EINSNPLLDGITLSGGDPFFYPEELLK-LVQRLSQ 103 >gi|209966936|ref|YP_002299851.1| FeMo cofactor biosynthesis protein nifB [Rhodospirillum centenum SW] gi|209960402|gb|ACJ01039.1| FeMo cofactor biosynthesis protein nifB [Rhodospirillum centenum SW] Length = 492 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 39/199 (19%), Positives = 67/199 (33%), Gaps = 54/199 (27%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRR------EMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H Y R+ + + C + C +C R+ G + + LA Q Sbjct: 60 AHHYFARMHVAVAPACNIQCNYCNRKFDCANESRPGVVSERLTPEEGARKVLAVAASVPQ 119 Query: 144 IWEVIFTG-GDP----------------------LILSHKRLQ--KVLKTL--RYIKHVQ 176 + + G GD L LS L +++ + I HV Sbjct: 120 LSVLGIAGPGDACYDWARTRATFALVARRLPDIRLCLSTNGLALPELVDEIVDMNIDHV- 178 Query: 177 ILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIAIHAN---HPYEFSEEAIAAISRL 230 + + +VDP +RI P + G + A+ H + + RL Sbjct: 179 TVTIN----MVDPEVGERIYPWIY-----HGHRRWTGRDASRLLHERQM-----EGLERL 224 Query: 231 ANAGIILLSQSVLLKGIND 249 G+++ SV++ GIND Sbjct: 225 TARGVLVKVNSVMIPGIND 243 >gi|187932645|ref|YP_001887172.1| heme biosynthesis [Clostridium botulinum B str. Eklund 17B] gi|187720798|gb|ACD22019.1| heme biosynthesis [Clostridium botulinum B str. Eklund 17B] Length = 451 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 23/102 (22%), Positives = 44/102 (43%), Gaps = 6/102 (5%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 +D D HS + Y + L ++H C + C++CF E V+S + Sbjct: 75 YSKDQYEDIAHSSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYHGHKGVMSLDVAK 132 Query: 133 AALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRY 171 A+ Y+ ++S E+ GG+P + ++ ++K R Sbjct: 133 KAIDYVVKRSGPRKNIEIDLFGGEP-TMIMDTIKDIIKYARD 173 >gi|170289332|ref|YP_001739570.1| radical SAM domain-containing protein [Thermotoga sp. RQ2] gi|170176835|gb|ACB09887.1| Radical SAM domain protein [Thermotoga sp. RQ2] Length = 348 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R +++ +VC C +C R + K ++ ++ + V+ +G DP Sbjct: 54 RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIIERAKLAVQFGAKTIVLQSGEDPY 113 Query: 156 ILSHKRLQKVLKTLRYI 172 + + +++ ++ + Sbjct: 114 YMPD-VISDIVREIKKM 129 >gi|157804180|ref|YP_001492729.1| hypothetical protein A1E_05140 [Rickettsia canadensis str. McKiel] gi|229890632|sp|A8F011|MIAB_RICCK RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|157785443|gb|ABV73944.1| hypothetical protein A1E_05140 [Rickettsia canadensis str. McKiel] Length = 446 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 29/137 (21%), Positives = 51/137 (37%), Gaps = 26/137 (18%) Query: 76 DPIGDNNHSPLKGIVHRYPD--RILLKLLHVCPVYCRFC---------FRR--EMVGSQK 122 D + + L YP + + C +C FC F R E V + Sbjct: 133 DFVEEAKFDQLP--EQLYPQGASAFISVQEGCDKFCTFCVVPYTRGVEFSRNVEQVYREA 190 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 V+S+ E L + + + G D I S L +++ L I +++ LR+ + Sbjct: 191 LKVVSNGAREIML--LGQN--VNAYHGKGVDDKIFS---LADLIRYLAQIPNLERLRYTT 243 Query: 183 RVPIVDPQRINPELIQC 199 PI + +LI+ Sbjct: 244 SHPID----MTDDLIKL 256 >gi|189346924|ref|YP_001943453.1| radical SAM enzyme, Cfr family [Chlorobium limicola DSM 245] gi|254807162|sp|B3ED49|RLMN_CHLL2 RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|189341071|gb|ACD90474.1| radical SAM enzyme, Cfr family [Chlorobium limicola DSM 245] Length = 361 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 39/191 (20%), Positives = 65/191 (34%), Gaps = 40/191 (20%) Query: 96 RILLKLLHVCPVYCRFC------FRREMV-GSQKGTVLSSKDTEAALAYIQEK--SQIWE 146 + C ++C FC FRR + G V ++ E I Sbjct: 110 TACISSQAGCSLHCSFCATGKTGFRRNLTSGEMTDQVF------LLNDHLAEHYGQTITN 163 Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIK-----HVQILRFHSRVPIVDPQRINPELIQCL 200 ++F G G+PL+ L + +TL + + + I PQ +L+ L Sbjct: 164 IVFMGMGEPLLNMTHVLDAI-ETLSNHNYRYSLSQRKISISTAGII--PQ---IDLLARL 217 Query: 201 KEAGKPVYIAIH--ANHPYE-FSEEAIA----AISRLANAGIILLSQSV-----LLKGIN 248 + +++H E A A+ + L Q V LL+ IN Sbjct: 218 -PHKVKLAVSLHSAIQTNRESIMPAAREYPLPALKKSLAEYNRLSGQPVTLVYMLLRDIN 276 Query: 249 DDPEILANLMR 259 D PE L++ Sbjct: 277 DSPEDAKALVK 287 >gi|325294473|ref|YP_004280987.1| Radical SAM domain protein [Desulfurobacterium thermolithotrophum DSM 11699] gi|325064921|gb|ADY72928.1| Radical SAM domain protein [Desulfurobacterium thermolithotrophum DSM 11699] Length = 384 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 33/201 (16%), Positives = 69/201 (34%), Gaps = 30/201 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P I ++ C + C C R + S +D + + I + S+ ++ TGG+ Sbjct: 9 PKWIAWEITRRCNLNCIHC-RSSSTMESEQGDFSFEDGKKLMDDIAKISKPT-IVLTGGE 66 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210 PL L++ + L + R + +V + E+ + +K G K V ++ Sbjct: 67 PL------LREDVWDLAAYGTEKGFRMCIATNGVLV-----DDEVCKEMKRVGIKMVSLS 115 Query: 211 IHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 + + E ++ A I L S K + + N+ + Sbjct: 116 LDGSTA-EIHDDFRKQPGAYEGVMKAAELFKKHDIPFLINSSFTK---RNAFDIPNVYKK 171 Query: 261 FVELRIKPYYLHHPDLAAGTS 281 E+ + +Y+ Sbjct: 172 AREIGARAWYMFLVLPVGRAE 192 >gi|320191451|gb|EFW66101.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. EC1212] gi|326340026|gb|EGD63833.1| coproporphyrinogen III oxidase [Escherichia coli O157:H7 str. 1125] Length = 419 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148 R++ + C +C FC F + + ++ E A + + + + I V Sbjct: 30 RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVY 89 Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 F GG P LS L +++ TLR + + RV D +RI+ Sbjct: 90 FGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138 >gi|269925522|ref|YP_003322145.1| protein of unknown function DUF512 [Thermobaculum terrenum ATCC BAA-798] gi|269789182|gb|ACZ41323.1| protein of unknown function DUF512 [Thermobaculum terrenum ATCC BAA-798] Length = 487 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 15/92 (16%) Query: 192 INPELIQCLKEAGK-PVYIAIHANHP---YEF-----SEEAIAAISRLANAGIILLSQSV 242 + P + L+E P+Y+++H P + + + ++RL GI + +Q V Sbjct: 130 LTPSDWRRLEEQRLSPLYVSVHTTDPDLRRRLLGYPKAPDILEQLARLREIGIQVHTQLV 189 Query: 243 LLKGINDDP------EILANLMRTFVELRIKP 268 L G+ND P + LA L T + + + P Sbjct: 190 LCPGLNDGPQLERTIDDLAALYPTVLSIAVVP 221 >gi|160889557|ref|ZP_02070560.1| hypothetical protein BACUNI_01981 [Bacteroides uniformis ATCC 8492] gi|156861074|gb|EDO54505.1| hypothetical protein BACUNI_01981 [Bacteroides uniformis ATCC 8492] Length = 432 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 14/113 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GVD--LYKKQMLPELVERISDIPGVEWIRLH----YAYPAHFPADLFRVMRER 242 >gi|328955533|ref|YP_004372866.1| iron-only hydrogenase maturation protein HydE [Coriobacterium glomerans PW2] gi|328455857|gb|AEB07051.1| iron-only hydrogenase maturation protein HydE [Coriobacterium glomerans PW2] Length = 365 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 41/211 (19%), Positives = 67/211 (31%), Gaps = 30/211 (14%) Query: 91 HRYPDRI----LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 RY D++ L+++ + C C +C R + L D A E Sbjct: 64 QRYGDKVFIRGLIEISNRCRNDCLYCGIRRSNECAERYRLQPADIIACTDKGYELGFRTF 123 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQ---ILRFHSRVPIVDPQRINPELIQCLKEA 203 V+ G DP + + L +++ ++ H L R + + + L Sbjct: 124 VMQGGEDPFF-TDEVLCPLIERIKA-NHPDCAITLSLGERTRESYQRLFDAGADRYL--L 179 Query: 204 GKPVYIAIHAN--HPYEFSEEAIAAI-SRLAN------AGIILLS--QSVLLKGINDDPE 252 H HP E S A S L AG ++ S Q+V + + DD Sbjct: 180 RHETATDAHYRRLHPSELSLATRKACLSNLKEIGYQTGAGFMVGSPYQTV--ENLADDML 237 Query: 253 ILANLMRTFVELR-IKPYYLHHPDLAAGTSH 282 L L V + P+ H Sbjct: 238 YLDELQPQMVGIGPFIPH-----RDTPFRDH 263 >gi|317480049|ref|ZP_07939161.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. 4_1_36] gi|316903791|gb|EFV25633.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. 4_1_36] Length = 432 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 14/113 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GVD--LYKKQMLPELVERISDIPGVEWIRLH----YAYPAHFPADLFRVMRER 242 >gi|310657443|ref|YP_003935164.1| radical sam domain-containing protein [Clostridium sticklandii DSM 519] gi|308824221|emb|CBH20259.1| Radical SAM domain protein [Clostridium sticklandii] Length = 288 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 22/119 (18%) Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIFTG 151 +++++ C C FC K ++ E ++ ++ V Sbjct: 17 LIVQVTIGCAHNRCTFC------SMYKDKQFRIRELEEVFEDLKSARAVYPKVKRVFLAD 70 Query: 152 GDPLILSHKRLQKVLKTLRYI--KHVQILRFHSRVPIVDPQ---RINPELIQCLKEAGK 205 GD L+L +L +L + + + +I + + PQ R + E + LKE G Sbjct: 71 GDALVLPTDKLIAILDKINELFPERERISAYAT------PQDIMRKSSEDLALLKEKGL 123 >gi|307293142|ref|ZP_07572988.1| RNA modification enzyme, MiaB family [Sphingobium chlorophenolicum L-1] gi|306881208|gb|EFN12424.1| RNA modification enzyme, MiaB family [Sphingobium chlorophenolicum L-1] Length = 449 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 16/110 (14%), Positives = 36/110 (32%), Gaps = 14/110 (12%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQ 143 L G + L ++ C +C +C V S+ A L + Sbjct: 143 LPGRTKQARPTAFLTIMEGCDKFCTYC-----VVPYTRGAEISRGWNAILDEAKALVDGG 197 Query: 144 IWEVIFTGG--DPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPI 186 + E+ G + + + +++ L I ++ +R+ + P Sbjct: 198 VREITLLGQNVNAWTGEDDKGRTQGMDGLVRELAKIDALKRIRYTTSHPN 247 >gi|291522320|emb|CBK80613.1| GTP cyclohydrolase subunit MoaA [Coprococcus catus GD/7] Length = 322 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 34/89 (38%), Gaps = 12/89 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE-----AALAYIQEKSQIWEVIFTGGD 153 L + C + CR+C + L ++ L I I +V TGG+ Sbjct: 14 LSVTDRCNLRCRYCM-----PPDGISCLPMREILTYEEIEHLCRIFAALGIHKVKITGGE 68 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS 182 P + K + +++ ++ I + + + Sbjct: 69 PFV--RKNICHLIRRIKQIPGIDSVTLTT 95 >gi|158313057|ref|YP_001505565.1| RNA modification protein [Frankia sp. EAN1pec] gi|158108462|gb|ABW10659.1| RNA modification enzyme, MiaB family [Frankia sp. EAN1pec] Length = 595 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 30/139 (21%), Positives = 49/139 (35%), Gaps = 16/139 (11%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 + LKL C C FC FR V + VL+ + A + G Sbjct: 243 VPLKLSSGCDRRCAFCAIPSFRGSHVSRRPEEVLAEAEWLAGQGARELVLVSENSTSYGK 302 Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ-CLKEAGKPVYIA 210 D L + L+K+L L + + +R + P + P L++ L G Y+ Sbjct: 303 D---LGDLRALEKLLPLLAAVPGIVRVR----TVYLQPAELRPSLLEVLLTTPGLAPYLD 355 Query: 211 IHANHPYEFSEEAIAAISR 229 + H S + + R Sbjct: 356 LSFQHA---SPAVLRRMRR 371 >gi|325962827|ref|YP_004240733.1| GTP cyclohydrolase subunit MoaA [Arthrobacter phenanthrenivorans Sphe3] gi|323468914|gb|ADX72599.1| GTP cyclohydrolase subunit MoaA [Arthrobacter phenanthrenivorans Sphe3] Length = 369 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 32/181 (17%) Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 G+ RY R L L C + C +C E + K V+S+++ + E+ Sbjct: 26 GLADRYGRRATDMRLSLTDKCNLRCTYCMPAEGLEWLAKQAVMSAEEIVRIVRIGVEQLG 85 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 + E+ TGG+PL+ L ++ LR R H +PI + + K A Sbjct: 86 VRELRLTGGEPLVRHD--LVDIIAALR--------RNHPALPISM---TSNGVGLAKKAA 132 Query: 204 GKPVYIAIHAN------HPYEFSEEAIAAISRLANAGI---------ILLSQSVLLKGIN 248 N H F++ AG+ + +VL++GIN Sbjct: 133 ALKAAGLTRINVSLDSLHEETFTQLTRRPFLDQVLAGVDAAWAAGLGPVKLNAVLMRGIN 192 Query: 249 D 249 D Sbjct: 193 D 193 >gi|320011639|gb|ADW06489.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331] Length = 742 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 17/100 (17%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAY----IQEKSQIW-----E 146 I+LK+ C + C C+ E + + K + A+++ + E + Sbjct: 11 IVLKVHSRCDLACDHCYIYEH--ADQSWRTRPKTISDEAISWTARRLAEHASAHALDSMS 68 Query: 147 VIFTGGDPLILSHKRL----QKVLKTLRYIKHVQILRFHS 182 VI GG+PL+ RL +++ L I + LR H+ Sbjct: 69 VILHGGEPLLAGPARLRRVCEELTAALNGIAELD-LRIHT 107 >gi|288930027|ref|ZP_06423868.1| Fe-S protein, radical SAM family [Prevotella sp. oral taxon 317 str. F0108] gi|288328686|gb|EFC67276.1| Fe-S protein, radical SAM family [Prevotella sp. oral taxon 317 str. F0108] Length = 456 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 44/204 (21%), Positives = 76/204 (37%), Gaps = 37/204 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + CP +C FC++ + G + +AAL I ++ D L+ S Sbjct: 168 LVVSRGCPHHCDFCYKDAFY--EGGKFFYTARVDAALKEIDALPGRH--LYFLDDHLLGS 223 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP-ELIQCLKEAG-KPVYIAIHA--- 213 + ++ + ++ + V F S + Q I +LI+ EAG + V+I Sbjct: 224 KRFAAELFEGMKGMNRV----FQSAATV---QSILEGDLIEKAAEAGMRSVFIGFETFSP 276 Query: 214 ------NHPYEFSEEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRTFVELRI 266 N + AA+ RL + GI++ V L DD ++ R V+ + Sbjct: 277 ENLKASNKCQNLQRDYSAAVQRLHSLGIMINGSFVFGLDH--DDADV----FRRTVDWGV 330 Query: 267 KP------YYLHHPDLAAGTSHFR 284 Y H GT F+ Sbjct: 331 DNAITTATY--HILTPYPGTRQFQ 352 >gi|284036269|ref|YP_003386199.1| MiaB-like tRNA modifying enzyme [Spirosoma linguale DSM 74] gi|283815562|gb|ADB37400.1| MiaB-like tRNA modifying enzyme [Spirosoma linguale DSM 74] Length = 449 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 50/126 (39%), Gaps = 16/126 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C C +C G + ++ + A I E+ + E++ TG Sbjct: 150 RTRTFLKVQDGCDYPCAYCTIPLARGKSRSDTIA--NVVKAAREIAER-GVKEIVLTGVN 206 Query: 152 -GDPLILS---HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 GD +++ + +++ L + ++ R S ++P + E+I + ++ + Sbjct: 207 IGDFGLINGQRTETFFDLVQALDEVDGIERFRISS----IEPNLLTDEIIAFVAQSKR-- 260 Query: 208 YIAIHA 213 H Sbjct: 261 -FVPHF 265 >gi|190570899|ref|YP_001975257.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|213019415|ref|ZP_03335221.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex quinquefasciatus JHB] gi|190357171|emb|CAQ54586.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex quinquefasciatus Pel] gi|212994837|gb|EEB55479.1| MiaB-like tRNA modifying enzyme [Wolbachia endosymbiont of Culex quinquefasciatus JHB] Length = 408 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 28/159 (17%), Positives = 60/159 (37%), Gaps = 29/159 (18%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +++ + C C FC E G+ + +++ E +I+ EV+FTG D Sbjct: 123 KSRAFIEIQNGCNHSCTFCSITEARGNNRSVPVNNI-IEQIKIFIEN--GYQEVVFTGVD 179 Query: 154 PL-----ILSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + + L +++ L+ I ++ LR S + + + ++ EL+ + + + Sbjct: 180 ITDFGTDLFGKQSLGSMVRRVLKDIPQLKRLRL-SSIDVAE---VDDELMDLIANESR-L 234 Query: 208 YIAIHAN---------------HPYEFSEEAIAAISRLA 231 +H + H E E + L Sbjct: 235 MPHLHLSLQSGNNLILKRMKRRHNREQVIEFCHKMKSLR 273 >gi|170686175|ref|ZP_02877397.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0465] gi|170669872|gb|EDT20613.1| putative coenzyme PQQ synthesis protein [Bacillus anthracis str. A0465] Length = 377 Score = 38.2 bits (88), Expect = 1.8, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHSLELTFEEGKKLIDDIYEMENPML---VFTG 64 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 65 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 115 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H + + AI L I + +V+ D E +A L+ Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDALEEMAVLIEE 175 Query: 261 F 261 Sbjct: 176 L 176 >gi|325002626|ref|ZP_08123738.1| pyrroloquinoline quinone biosynthesis protein PqqE [Pseudonocardia sp. P1] Length = 360 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 41/244 (16%), Positives = 87/244 (35%), Gaps = 38/244 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L +L + CP+ C +C + LS+ D + A + + +GG+PL+ Sbjct: 9 LLAELTYRCPLACAYCSNPIELARYDDE-LSTADWQRVFAE-AADLGVLQCHLSGGEPLL 66 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANH 215 L ++++T + + L + ++ + L+ AG V +++ A+ Sbjct: 67 RRD--LTELVRTAQSLGMYTNL-------VTSAIGLSRPRAEALRAAGLDHVQVSVQADE 117 Query: 216 PYEFSEEA--------IAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 P A I A + G L VL + D + L+ R++ Sbjct: 118 PATSDRIAGVRSFERKIEACRLVRELGWPLTVNVVLHRQNIDRIGEIITLVEELQADRVE 177 Query: 268 ----PYY------LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGY 317 YY + ++ ++IV + + +++G + LP Y Sbjct: 178 LANTQYYGWAWKNRSSLLPSREQ------LDRAEEIVTAARSRLAGRM--EIVHVLPDYY 229 Query: 318 GKVK 321 + Sbjct: 230 SRYP 233 >gi|309792044|ref|ZP_07686520.1| MiaB-like tRNA modifying enzyme YliG [Oscillochloris trichoides DG6] gi|308225937|gb|EFO79689.1| MiaB-like tRNA modifying enzyme YliG [Oscillochloris trichoides DG6] Length = 439 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 38/202 (18%), Positives = 66/202 (32%), Gaps = 38/202 (18%) Query: 59 QFIPQKEELNILPEEREDPIGDN-----NHSPLKGIVHRYPDR-ILLKLLHVCPVYCRFC 112 Q + E+ P + P+ + I P LK+ C + C FC Sbjct: 100 QAWTRINEVIAPPASQPIPLLETPAPAYADWRSTPIQRLQPSHSAYLKISDGCNLRCAFC 159 Query: 113 FRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFT-------GGDPLILSHKRLQ 163 ++SK A L +++ + E++ G D L L L Sbjct: 160 TI-----PSIKGDMASKPIRAVLGEVEQLVGQGVQEIVLVAQHLTDYGRD-LGLQDG-LA 212 Query: 164 KVLKTLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---IAIHANHPYEF 219 +L+ + I H +R P I+ LI+ + E + + + + HP Sbjct: 213 TLLEEMCQIVPHSGWIRL----MYAYPHGISERLIRVMAEHPQVLAYLDMPLQHAHPDTL 268 Query: 220 --------SEEAIAAISRLANA 233 +E A I +L A Sbjct: 269 RRMRRPPDTEHTRAVIQQLRAA 290 >gi|302386178|ref|YP_003822000.1| Radical SAM domain protein [Clostridium saccharolyticum WM1] gi|302196806|gb|ADL04377.1| Radical SAM domain protein [Clostridium saccharolyticum WM1] Length = 337 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 32/63 (50%), Gaps = 3/63 (4%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C + C+ C++ G++K L++++ + + I + +IF+GG+PL+ Sbjct: 3 VSWMTTNQCNLKCKHCYQDA--GNKKTDELTTEEAKRLIDEIAR-AGFRIMIFSGGEPLM 59 Query: 157 LSH 159 Sbjct: 60 RPD 62 >gi|270296681|ref|ZP_06202880.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. D20] gi|270272668|gb|EFA18531.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides sp. D20] Length = 432 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 42/113 (37%), Gaps = 14/113 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GVD--LYKKQMLPELVERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRER 242 >gi|257456539|ref|ZP_05621735.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] gi|257446199|gb|EEV21246.1| conserved hypothetical protein [Treponema vincentii ATCC 35580] Length = 498 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 38/222 (17%), Positives = 72/222 (32%), Gaps = 39/222 (17%) Query: 17 ANLIKKEQIDEIKEISNHYS-------IALTPVIANLINPHNPND-----PIARQFIP-- 62 ++ +I+ + + A+ A L+ D R ++ Sbjct: 107 YAQLEAAEIEALHPHVLAFPGQQKDLLTAIPAYFAELVRGSAYFDTAFFLSALRTYLSGL 166 Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-----------YPDRILLKLLHVCPVYCRF 111 P + P+GD + GI + + R LLK+ C C + Sbjct: 167 TGRIPQDEPRHHK-PVGDQSG---HGIQRKPLFALSSPHFLFHSRALLKIQDGCNDACAY 222 Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 C R + + ++ +++ E E++ + EV TG + L L+ Sbjct: 223 C-RIRLARGKSVSLPAAEVLERLR--CIEETGVPEVTLTGVN-LSQYRSEAGDFAGILKL 278 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 I +R R+ + P RI+ L+ L I H Sbjct: 279 ILENSTIRV--RISSLYPDRIDEALVPLLAHPR----ICPHF 314 >gi|77920251|ref|YP_358066.1| Fe-S oxidoreductase coenzyme synthesis protein [Pelobacter carbinolicus DSM 2380] gi|77546334|gb|ABA89896.1| Fe-S oxidoreductase, putative coenzyme synthesis protein [Pelobacter carbinolicus DSM 2380] Length = 344 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 37/223 (16%), Positives = 76/223 (34%), Gaps = 54/223 (24%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSK----DTEAALAYIQEKSQIWEVIFTGGDPLILS 158 C + C +C + GT L+ + + A L V+ GG+PL+ Sbjct: 33 RQCDLRCLYC------YADSGTALADELALSEIYAVLEQAMALGIRRVVVLGGGEPLMYP 86 Query: 159 HKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 + ++++ L H + + + +I EL Q G V + N Sbjct: 87 --HVVEIMQYLAQ--HGIGIDLFTNGT--------QITAELAQEFVRLG--VAPVVKMNS 132 Query: 216 PYEFSEEA-----------IAAISRLANAG-----IILLSQSVLLKGINDDPEILANLMR 259 + ++ + L AG + L +Q+V+ + + + L ++ R Sbjct: 133 RRQQVQDFLAGRQGAYADIRRGLELLMQAGYPAEGLPLGAQTVVCRQ---NIDELPDMWR 189 Query: 260 TFVELRIKPYYLHHPDLA---AGTSH--FRLTIEEGQKIVASL 297 + I PY + H +++ E Q + +L Sbjct: 190 WLRDRHIIPY---VELMTWQGRARRHPELEVSVAEMQGLFETL 229 >gi|315223707|ref|ZP_07865557.1| 2-methylthioadenine synthetase [Capnocytophaga ochracea F0287] gi|314946282|gb|EFS98281.1| 2-methylthioadenine synthetase [Capnocytophaga ochracea F0287] Length = 437 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 24/131 (18%), Positives = 44/131 (33%), Gaps = 23/131 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG 151 R LK+ C C +C + S E +A + I E++ TG Sbjct: 140 RTRAFLKVQDGCDYKCTYCTI-----PMARGISRSDTIENIIANAKKISDKGIKEIVLTG 194 Query: 152 ---GDPLILS------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 GD ++++ L ++ ++ LR S ++P I E I + + Sbjct: 195 VNIGDYGKGEFGNKKHEHTFLELVQALDKVEGIERLRISS----IEPNLIKDETIDFIAQ 250 Query: 203 AGKPVYIAIHA 213 + H Sbjct: 251 SN---SFVPHF 258 >gi|146329852|ref|YP_001210121.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dichelobacter nodosus VCS1703A] gi|229890515|sp|A5EXA7|MIAB_DICNV RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|146233322|gb|ABQ14300.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Dichelobacter nodosus VCS1703A] Length = 456 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 15/124 (12%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154 + ++ C YC +C G++ D A A + + + E+ G + Sbjct: 151 TAYVSVMEGCSKYCTYCVVPYTRGAEISRPF--DDVLAECATLAAQ-GVREINLLGQNVN 207 Query: 155 ---LILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + L +++ + I ++ +RF + P + LI+ + K + Sbjct: 208 AYRGAMHDGTIADLALLIEYVAAIPNIGRIRFTTSH----PSEFSDALIETYRRVPK-LV 262 Query: 209 IAIH 212 +H Sbjct: 263 SHLH 266 >gi|296109434|ref|YP_003616383.1| Radical SAM domain protein [Methanocaldococcus infernus ME] gi|295434248|gb|ADG13419.1| Radical SAM domain protein [Methanocaldococcus infernus ME] Length = 372 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 33/146 (22%), Positives = 58/146 (39%), Gaps = 17/146 (11%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS--QIWEVIFTGG 152 ++++L + C C +C E + + + + I+E V TGG Sbjct: 28 EKLVLFITGTCKNNCYYCPLSEKRKDKDVIYANERLISSVEEAIEEAKLCSSRGVGITGG 87 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 +PL L R +K L+ L+ + FH+ P+ I E ++ +KE + + IH Sbjct: 88 NPL-LRVDRTKKYLEALKK----EFKDFHA-HLYTTPETITTENLEKIKELDE---LRIH 138 Query: 213 ----AN--HPYEFSEEAIAAISRLAN 232 N + EF +E I I Sbjct: 139 PTKIFNIGYKEEFVDELIKKIRLAKK 164 >gi|256828055|ref|YP_003156783.1| molybdenum cofactor biosynthesis protein A [Desulfomicrobium baculatum DSM 4028] gi|256577231|gb|ACU88367.1| molybdenum cofactor biosynthesis protein A [Desulfomicrobium baculatum DSM 4028] Length = 330 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 21/163 (12%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C + E +LS ++ + + +++ + +V TGG+P Sbjct: 15 LSITDRCNLRCLYCRPQSEWTFMPHEQILSFEEMAELVD-VAKEAGVEKVRLTGGEPFAR 73 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 L LR + + R++ L+EAG + I + Sbjct: 74 KDFI--PFTGRLHAKYPDLDLRITTNG-TLLSGRVDE-----LREAGVS-CLNISLDTLQ 124 Query: 218 -----EFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + ++ A I G+ + V LKGINDD Sbjct: 125 RKKFEEITKVDAYDQVRAGIDACLAGGLRVKVNVVALKGINDD 167 >gi|167469633|ref|ZP_02334337.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis FV-1] Length = 212 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156 L + VC C +C + LS + +I TGG+P + Sbjct: 17 LSITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAFALLGTEKIR---LTGGEPSM 73 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215 ++ T+R ++ L + R+ ++ Q ++AG I + + Sbjct: 74 RRD--FTDIIATIRQNPAIRTL-----AVTTNGYRLVRDVAQW-RDAGLT-AINVSVDSL 124 Query: 216 -PYEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250 P +F + + I +AG + +VL++ +ND Sbjct: 125 DPRQFHAITGQDKFYQVMQGIDAAFDAGFDKVKVNAVLMRDVNDR 169 >gi|157825701|ref|YP_001493421.1| MiaB-like tRNA modifying enzyme [Rickettsia akari str. Hartford] gi|157799659|gb|ABV74913.1| MiaB-like tRNA modifying enzyme [Rickettsia akari str. Hartford] Length = 416 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 16/126 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +++ + C +C FC G K + + Y+ EV+FTG D Sbjct: 132 KSRAFIQVQNGCDHFCTFCIIP--YGRGKSRSVPIGAIAEQVKYLVLN-GFKEVVFTGVD 188 Query: 154 P-LILSH----KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 S +++K L + ++ LR S + + + I+ EL + + + + Sbjct: 189 VTAYGSDLPGSPTFAQMIKRVLNLVPELKRLRL-SSIDVAE---IDDELFELIAYSER-- 242 Query: 208 YIAIHA 213 I H Sbjct: 243 -IMPHF 247 >gi|22126899|ref|NP_670322.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis KIM 10] gi|45440835|ref|NP_992374.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Microtus str. 91001] gi|108807062|ref|YP_650978.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis Antiqua] gi|108813002|ref|YP_648769.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis Nepal516] gi|145599807|ref|YP_001163883.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis Pestoides F] gi|165924730|ref|ZP_02220562.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Orientalis str. F1991016] gi|166211503|ref|ZP_02237538.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Antiqua str. B42003004] gi|167423923|ref|ZP_02315676.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Mediaevalis str. K1973002] gi|21959935|gb|AAM86573.1|AE013903_10 molybdopterin biosynthesis protein A [Yersinia pestis KIM 10] gi|45435693|gb|AAS61251.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Microtus str. 91001] gi|108776650|gb|ABG19169.1| GTP cyclohydrolase subunit MoaA [Yersinia pestis Nepal516] gi|108778975|gb|ABG13033.1| GTP cyclohydrolase subunit MoaA [Yersinia pestis Antiqua] gi|145211503|gb|ABP40910.1| GTP cyclohydrolase subunit MoaA [Yersinia pestis Pestoides F] gi|165923790|gb|EDR40922.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Orientalis str. F1991016] gi|166207274|gb|EDR51754.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Antiqua str. B42003004] gi|167056772|gb|EDR66535.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Mediaevalis str. K1973002] Length = 341 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 29/165 (17%), Positives = 58/165 (35%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156 L + VC C +C + LS + +I TGG+P + Sbjct: 32 LSITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAFALLGTEKIR---LTGGEPSM 88 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215 ++ T+R ++ L + R+ ++ Q ++AG I + + Sbjct: 89 RRD--FTDIIATIRQNPAIRTL-----AVTTNGYRLVRDVAQW-RDAGLT-AINVSVDSL 139 Query: 216 -PYEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250 P +F + + I +AG + +VL++ +ND Sbjct: 140 DPRQFHAITGQDKFYQVMQGIDAAFDAGFDKVKVNAVLMRDVNDR 184 >gi|323701900|ref|ZP_08113570.1| MiaB-like tRNA modifying enzyme YliG [Desulfotomaculum nigrificans DSM 574] gi|323533204|gb|EGB23073.1| MiaB-like tRNA modifying enzyme YliG [Desulfotomaculum nigrificans DSM 574] Length = 445 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 28/143 (19%), Positives = 48/143 (33%), Gaps = 22/143 (15%) Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQI----WEV 147 +K+ C C +C R ++++ T A +I + Sbjct: 148 TAYIKVAEGCDNRCAYCAIPNIRGRFRSRPLESIVAEAKTLVA----NGTREIILIAQDT 203 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 G D I L K+L L+ I ++ +R P R LI+ + + K Sbjct: 204 TRYGQD--IYGQYSLDKLLWLLQDIPDLKWIRI----LYCYPNRFTDGLIKAIAQLPKVC 257 Query: 208 -YIAIHANHPYEFSEEAIAAISR 229 YI + H E + A+ R Sbjct: 258 KYIDLPVQHAN---NEILRAMGR 277 >gi|322383763|ref|ZP_08057514.1| hypothetical protein PL1_1683 [Paenibacillus larvae subsp. larvae B-3650] gi|321151975|gb|EFX44918.1| hypothetical protein PL1_1683 [Paenibacillus larvae subsp. larvae B-3650] Length = 389 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 6/86 (6%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160 ++C VYCRFC GS +G VL + + I E++ GG + Sbjct: 74 TNICDVYCRFCAFYRDPGSAEGYVLPDETIFQKIQETI--DVGGTEILMQGG---TNPNL 128 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPI 186 + LR IK + HS P Sbjct: 129 KFSYYTNLLREIKKRFDITMHSFSPA 154 >gi|320193986|gb|EFW68619.1| coproporphyrinogen III oxidase [Escherichia coli WV_060327] Length = 419 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148 R++ + C +C FC F + + ++ E A + + + + I V Sbjct: 30 RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEREADSVLHQSAPIHAVY 89 Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 F GG P LS L +++ TLR + + RV D +RI+ Sbjct: 90 FGGGTPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138 >gi|322435966|ref|YP_004218178.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9] gi|321163693|gb|ADW69398.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX9] Length = 532 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 40/182 (21%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILS 158 CP +C FC G + ++ + I +I D P+ L+ Sbjct: 164 RGCPKHCSFCSVWR----TDGQKPRQRQFQSVIDEIVNLRRIGFRFIALADDNFYPVTLT 219 Query: 159 HKRLQK------VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 RL + L L I+ + +L++ L + K + Sbjct: 220 DLRLAREQGNQAKLDELIAIRSERF-----------------QLMEELSKLPKDMVFFTQ 262 Query: 213 AN-HPYEFSEEAIAAISRLANAGIILLSQSVL---LKGI----NDDPEILANLMRTFVEL 264 E + + A+ R G ++ ++V LK + N E LA ++TF + Sbjct: 263 ITMEAGE-DGDYLDAMRRANIKGALVGVEAVTPEGLKAVFKDFNYSGEALAKQLQTFKKH 321 Query: 265 RI 266 + Sbjct: 322 GV 323 >gi|269469075|gb|EEZ80630.1| pyruvate-formate lyase-activating enzyme [uncultured SUP05 cluster bacterium] Length = 207 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Query: 93 YPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 YPD + + CP CR+C +++ + K T D E + +I+ + + + V+F+ Sbjct: 18 YPDNLSCVVFTQGCPWRCRYCHNHDLIPTSKQTQF---DWEQIVEFIKTRVGLLDAVVFS 74 Query: 151 GGDP 154 GG+P Sbjct: 75 GGEP 78 >gi|218133712|ref|ZP_03462516.1| hypothetical protein BACPEC_01581 [Bacteroides pectinophilus ATCC 43243] gi|217991087|gb|EEC57093.1| hypothetical protein BACPEC_01581 [Bacteroides pectinophilus ATCC 43243] Length = 447 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 45/124 (36%), Gaps = 11/124 (8%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 LK+ C C +C V +V + + A + E+ ++ L + Sbjct: 150 LKIAEGCDKCCTYCII-PKVRGSYRSVPMDELIKQAED-LAEQGVKELILVAQETSLYGT 207 Query: 159 H----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHA 213 K L ++L L I ++ +R P+ I+ LIQ +K K Y+ + Sbjct: 208 DLYGEKSLHRLLHELAAIDGIEWIRI----LYCYPEEIDDTLIQAIKSEPKVCHYLDLPI 263 Query: 214 NHPY 217 H Sbjct: 264 QHAN 267 >gi|167465547|ref|ZP_02330636.1| hypothetical protein Plarl_23811 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 377 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 6/86 (6%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160 ++C VYCRFC GS +G VL + + I E++ GG + Sbjct: 62 TNICDVYCRFCAFYRDPGSAEGYVLPDETIFQKIQETI--DVGGTEILMQGG---TNPNL 116 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPI 186 + LR IK + HS P Sbjct: 117 KFSYYTNLLREIKKRFDITMHSFSPA 142 >gi|147678706|ref|YP_001212921.1| arylsulfatase regulator [Pelotomaculum thermopropionicum SI] gi|146274803|dbj|BAF60552.1| arylsulfatase regulator [Pelotomaculum thermopropionicum SI] Length = 451 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 16/66 (24%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI---QEKSQIWEVIFT 150 PD ++L L + C + CR+C + E+ + + +S A+ ++ ++ + F Sbjct: 68 PDTLVLMLTYACNMACRYCCQGEIP-AARENQMSQAVAYRAVDWLMRNSADAETVNIGFF 126 Query: 151 GGDPLI 156 GG+PL+ Sbjct: 127 GGEPLL 132 >gi|82617353|emb|CAI64265.1| hypothetical protein [uncultured archaeon] gi|268323060|emb|CBH36648.1| hypothetical protein, radical SAM superfamily [uncultured archaeon] Length = 401 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 39/198 (19%), Positives = 73/198 (36%), Gaps = 41/198 (20%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG-----SQKGTVLSSKDTEAALAYIQEKSQIW---- 145 +++L+ + C C FC+ + G ++G + D + +A ++ + Sbjct: 56 EKLLINPYNGCSHNCLFCYSHALGGYFSIFRERGVLAVFNDFDKIIA--RQLDGLNVASC 113 Query: 146 EVIFTGGDPLI-------LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 + DP LS K L+ + I VQ S I+ ++ Sbjct: 114 GYLSPVTDPFQRINAKYELSEKILKAFIDR--NIP-VQFTTKGS---------ISERALK 161 Query: 199 CLKEAGKP---VYIAIHANHPYE-------FSEEAIAAISRLANAGIILLSQS-VLLKGI 247 +K+ V I A E + E + I RLA+AGI + + ++ + Sbjct: 162 IIKKQEHSFGEVSILTMAEDKRERLMAGGASTAELVRNIERLADAGIFAVCRIDPIIPYV 221 Query: 248 NDDPEILANLMRTFVELR 265 DD E L L++ V+ Sbjct: 222 TDDEEGLETLVQKVVDAG 239 >gi|189465617|ref|ZP_03014402.1| hypothetical protein BACINT_01975 [Bacteroides intestinalis DSM 17393] gi|189437891|gb|EDV06876.1| hypothetical protein BACINT_01975 [Bacteroides intestinalis DSM 17393] Length = 432 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 21/115 (18%), Positives = 44/115 (38%), Gaps = 14/115 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----QI--WEVIFT 150 LK+ C C +C + G + ++ + Y+ K QI E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPV--EEILDEVRYLVNKGVKEFQIIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GVD--LYKKQMLPELIERISEIPGVEWIRLH----YAYPAHFPTDLFRVMRERPN 244 >gi|160931620|ref|ZP_02079015.1| hypothetical protein CLOLEP_00452 [Clostridium leptum DSM 753] gi|156869491|gb|EDO62863.1| hypothetical protein CLOLEP_00452 [Clostridium leptum DSM 753] Length = 437 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 10/73 (13%) Query: 195 ELIQCLKEAGKPVYIAIHANHPYEF---------SEEAIAAISRLANAGIILLSQSVLLK 245 E+ + +K P+ I++H +P E + EA++ I R A AGI + Q VL Sbjct: 133 EISRIIKMHISPMNISVHTTNP-ELRVKMMKNPRAGEALSIIRRFAQAGIKINCQIVLCP 191 Query: 246 GINDDPEILANLM 258 G ND E+ L Sbjct: 192 GYNDGEELKRTLS 204 >gi|288925016|ref|ZP_06418952.1| 2-methylthioadenine synthetase [Prevotella buccae D17] gi|288338206|gb|EFC76556.1| 2-methylthioadenine synthetase [Prevotella buccae D17] Length = 450 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 19/126 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQIWEVIFT 150 R LK+ C +C +C G + ++S + EAAL E++ T Sbjct: 153 RTRYFLKVQDGCSYFCTYCTIPYARGFSRNPSIASLVEQAREAALE------GGREIVLT 206 Query: 151 G---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 G GD +H+ ++K L ++ ++ R S ++P + EL++ + Sbjct: 207 GVNIGDFGATTHESFLDLVKALDEVEGIERFRISS----LEPDLCSDELVEYCSISR--- 259 Query: 208 YIAIHA 213 H Sbjct: 260 AFMPHF 265 >gi|237755862|ref|ZP_04584458.1| putative oxygen-independent coproporphyrinogen III oxidase [Sulfurihydrogenibium yellowstonense SS-5] gi|237691973|gb|EEP60985.1| putative oxygen-independent coproporphyrinogen III oxidase [Sulfurihydrogenibium yellowstonense SS-5] Length = 365 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 45/107 (42%), Gaps = 10/107 (9%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAA----LAYIQEKSQIWEVIFTGGDPLILSHK 160 C + C +C V + L + EA L Y+ I + F GG P L + Sbjct: 12 CNIKCPYCDFTSFVWQED--KLKDRYVEALKKELLMYLDNDFDIQTIYFGGGTPSTLKPE 69 Query: 161 RLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 ++ +++ ++ +KH + L ++P+ + + +K+AG Sbjct: 70 KIAEIIDFIKNNVKHQKNLEI---TVEINPKTYEYDEFKIIKDAGVN 113 >gi|228990331|ref|ZP_04150297.1| Radical SAM domain protein [Bacillus pseudomycoides DSM 12442] gi|228769407|gb|EEM18004.1| Radical SAM domain protein [Bacillus pseudomycoides DSM 12442] Length = 468 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149 Y + L + H C + C +CF + + ++S + + A+ Y+ E + ++ F Sbjct: 97 YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDF 156 Query: 150 TGGDPLILSHKRLQKVLKTLRY 171 GG+PL+ K +++++ R Sbjct: 157 FGGEPLMA-WKVVKQIVAYARS 177 >gi|228996442|ref|ZP_04156083.1| Radical SAM domain protein [Bacillus mycoides Rock3-17] gi|228763325|gb|EEM12231.1| Radical SAM domain protein [Bacillus mycoides Rock3-17] Length = 468 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149 Y + L + H C + C +CF + + ++S + + A+ Y+ E + ++ F Sbjct: 97 YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDF 156 Query: 150 TGGDPLILSHKRLQKVLKTLRY 171 GG+PL+ K +++++ R Sbjct: 157 FGGEPLMA-WKVVKQIVTYARS 177 >gi|229004086|ref|ZP_04161888.1| Radical SAM domain protein [Bacillus mycoides Rock1-4] gi|228757184|gb|EEM06427.1| Radical SAM domain protein [Bacillus mycoides Rock1-4] Length = 468 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 4/82 (4%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIF 149 Y + L + H C + C +CF + + ++S + + A+ Y+ E + ++ F Sbjct: 97 YVKALCLNVAHTCNLSCEYCFASQGKYNGSRAIMSYEVGKRAIDYLLENSGHHRNLDIDF 156 Query: 150 TGGDPLILSHKRLQKVLKTLRY 171 GG+PL+ K +++++ R Sbjct: 157 FGGEPLMA-WKVVKQIVAYARS 177 >gi|207092233|ref|ZP_03240020.1| hypothetical protein HpylHP_04483 [Helicobacter pylori HPKX_438_AG0C1] Length = 418 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRGSNIAQLIKKLSQIAGLKRIRIGS 221 >gi|170289684|ref|YP_001736500.1| Fe-S oxidoreductase [Candidatus Korarchaeum cryptofilum OPF8] gi|170173764|gb|ACB06817.1| Predicted Fe-S oxidoreductase [Candidatus Korarchaeum cryptofilum OPF8] Length = 573 Score = 38.2 bits (88), Expect = 1.9, Method: Composition-based stats. Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 36/170 (21%) Query: 99 LKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAY-IQEKSQI-WEVIFTGG 152 L + + C + C +CF R V S ++ + + ++EK V TGG Sbjct: 125 LVVTNRCNMDCWYCFFYAERMGYVYE-----PSLEEIDRMVDLMLKEKPAHGNAVQITGG 179 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA- 210 +PL L ++ + L K V ++ ++ + P L++ L+EAG +Y + Sbjct: 180 EPL-LRDDIVE--IVKLLKRKGVTHIQLNTEGVAFLEK---PWLMKELREAGVNTIYFSF 233 Query: 211 ----------IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H PY ++++ L +L +V+ KGIND Sbjct: 234 DGVTPIANPKTHWETPYILDLARKSSMTSL------VLVPTVI-KGINDR 276 >gi|313906547|ref|ZP_07839877.1| Radical SAM domain protein [Eubacterium cellulosolvens 6] gi|313468616|gb|EFR63988.1| Radical SAM domain protein [Eubacterium cellulosolvens 6] Length = 218 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + C + C +C M ++ G + + E ++YI+E + V TGG+PL+ Sbjct: 21 AVFVRFRGCNLNCSYC--DTMWANEPGCPYAEESPEQIVSYIEETK-VKNVTLTGGEPLL 77 >gi|261402234|ref|YP_003246458.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7] gi|261369227|gb|ACX71976.1| Radical SAM domain protein [Methanocaldococcus vulcanius M7] Length = 287 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 8/76 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 +Y ++LK+ + C + C +C+ ++ + K + ++ Y+ ++ FTG Sbjct: 2 KY---LILKITNRCNLNCIYCY----ANNKNDKDMDFKTAKRSIDYLLNLDDKLKIQFTG 54 Query: 152 GDPLILSHKRLQKVLK 167 G+PL L+ K ++KV+K Sbjct: 55 GEPL-LNFKLIEKVVK 69 >gi|83944995|ref|ZP_00957361.1| hypothetical protein OA2633_10209 [Oceanicaulis alexandrii HTCC2633] gi|83851777|gb|EAP89632.1| hypothetical protein OA2633_10209 [Oceanicaulis alexandrii HTCC2633] Length = 468 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 23/124 (18%), Positives = 45/124 (36%), Gaps = 24/124 (19%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151 + + C +C FC V S+ + +A ++ + EV G Sbjct: 166 TAFVTVQEGCDKFCTFC-----VVPYTRGAEWSRPVDQIVAEVRALAAKGVREVTLLGQN 220 Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 GDP L ++++ L I ++ +RF + P+ ++ +LIQ Sbjct: 221 VNAFHGEAPKGDPEGGVWG-LGRLVRHLAKIGGIERIRFTTSH----PKDMDDDLIQAFA 275 Query: 202 EAGK 205 + K Sbjct: 276 DEPK 279 >gi|194333737|ref|YP_002015597.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Prosthecochloris aestuarii DSM 271] gi|194311555|gb|ACF45950.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Prosthecochloris aestuarii DSM 271] Length = 251 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 17/77 (22%), Positives = 34/77 (44%), Gaps = 4/77 (5%) Query: 93 YPDRI-LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 YP I + C + C +C E+V + L +++ E + ++ + + V+ T Sbjct: 33 YPGMISAVLYTAGCNLRCIYCHNPELVLPDRIQRLGAEERETIVTWLVRNRMLLDAVVVT 92 Query: 151 GGDPLILS--HKRLQKV 165 GG+PL+ L + Sbjct: 93 GGEPLLHPALPGLLGWI 109 >gi|295102362|emb|CBK99907.1| GTP cyclohydrolase subunit MoaA [Faecalibacterium prausnitzii L2-6] Length = 325 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 42/84 (50%), Gaps = 3/84 (3%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + +C + CR+C + ++ VL+ ++ LA + + + V TGG+PL+ Sbjct: 14 LSVTDLCNLRCRYCMPDGVEKLEREAVLTYEEFLR-LAALFARCGVDTVRVTGGEPLV-- 70 Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182 K + +++ L+ I ++ + + Sbjct: 71 RKGVDQLVAGLKAIPGIRKVTMTT 94 >gi|255658436|ref|ZP_05403845.1| organic radical activating enzyme family protein [Mitsuokella multacida DSM 20544] gi|260849772|gb|EEX69779.1| organic radical activating enzyme family protein [Mitsuokella multacida DSM 20544] Length = 213 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 6/77 (7%) Query: 92 RYPDRILLKLLH------VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 YP R L CP C C E+ +Q G LS + + L + + Sbjct: 13 LYPVRALGPGNRLGIWLAGCPRRCPGCSNPELWQAQAGQALSQERLQELLRPFLSREDLG 72 Query: 146 EVIFTGGDPLILSHKRL 162 V+ TGGDP + L Sbjct: 73 GVVVTGGDPFFQADALL 89 >gi|224024976|ref|ZP_03643342.1| hypothetical protein BACCOPRO_01707 [Bacteroides coprophilus DSM 18228] gi|224018212|gb|EEF76210.1| hypothetical protein BACCOPRO_01707 [Bacteroides coprophilus DSM 18228] Length = 474 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 6/108 (5%) Query: 73 EREDP-IGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVL 126 E EDP + + ++ + I R Y +RI+ L L + C C +C + L Sbjct: 60 ECEDPQLLEEIYALAREIKQRFYGNRIVMFAPLYLSNYCVNSCTYCPYHIKNKTIARKKL 119 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + ++ + +Q+ + G DPL + + + ++T+ IKH Sbjct: 120 TQEEIRREVIALQDMGHKRLALEAGEDPLHNPIEYILESIQTIYSIKH 167 >gi|148256302|ref|YP_001240887.1| putative arylsulfatase regulatory protein [Bradyrhizobium sp. BTAi1] gi|146408475|gb|ABQ36981.1| putative Arylsulfatase regulatory protein [Bradyrhizobium sp. BTAi1] Length = 370 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 23/161 (14%), Positives = 50/161 (31%), Gaps = 37/161 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGGDPL 155 ++ C V C +C+ + ++S AA ++ + + + V++ G+PL Sbjct: 1 MQPTAFCNVDCDYCY---LPNRTDPRIMSHDIVAAAADFVFQGGLDASDFTVVWHAGEPL 57 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPI--VDP-------QRINPELIQCLKEAGKP 206 ++ + R + P P IN + G Sbjct: 58 VVPPS---WYREAFA--------RIGAAAPANKAVPHAIQTNGMLINDDWCDLFLAHGVR 106 Query: 207 VYIAIH---ANH-PYEFS-------EEAIAAISRLANAGII 236 V ++I H + A+ + +L G+ Sbjct: 107 VGVSIDGPAFLHDARRRTRSGKGTHAAALRGLRKLRERGVP 147 >gi|146303298|ref|YP_001190614.1| radical SAM domain-containing protein [Metallosphaera sedula DSM 5348] gi|145701548|gb|ABP94690.1| Radical SAM domain protein [Metallosphaera sedula DSM 5348] Length = 400 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 19/77 (24%), Positives = 44/77 (57%), Gaps = 6/77 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--GGDPLI 156 L L + C C +CF++ G +K ++ + + + Y++++ + +V T GG+PL Sbjct: 73 LLLTYNCNFNCTYCFQK---GFRKDLTVTEEVMKGFINYVRKRERGRKVRVTFFGGEPL- 128 Query: 157 LSHKRLQKVLKTLRYIK 173 L K+++++ ++L +K Sbjct: 129 LELKKIEEISRSLSDLK 145 >gi|157827747|ref|YP_001496811.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii OSU 85-389] gi|229890631|sp|A8GY24|MIAB_RICB8 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|157803051|gb|ABV79774.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii OSU 85-389] Length = 446 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 34/141 (24%) Query: 76 DPIGDNNHSPLKGIVHRYPDRI--LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + + L YP + + C +C FC V S++ E Sbjct: 133 DFVEEAKFDQLP--EQLYPQGASSFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185 Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178 + +V+ +G ++L S + L +++ L I +++ L Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKTSDDKVFTLADLIRHLVKIPNLERL 239 Query: 179 RFHSRVPIVDPQRINPELIQC 199 R+ + PI + +LI Sbjct: 240 RYTTSHPID----MTDDLISL 256 >gi|284162386|ref|YP_003401009.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Archaeoglobus profundus DSM 5631] gi|284012383|gb|ADB58336.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Archaeoglobus profundus DSM 5631] Length = 234 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 5/68 (7%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 CP C +C + + G ++ ++ I+E I V TGG+PL+ + L Sbjct: 26 GCPFRCPYCQNYRLF--EGGVEVTPEEIAKK---IRENYLIEGVCLTGGEPLVQNLDELT 80 Query: 164 KVLKTLRY 171 K+++ L+ Sbjct: 81 KLIELLKE 88 >gi|239831834|ref|ZP_04680163.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum intermedium LMG 3301] gi|239824101|gb|EEQ95669.1| molybdenum cofactor biosynthesis protein A [Ochrobactrum intermedium LMG 3301] Length = 369 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 28/167 (16%), Positives = 57/167 (34%), Gaps = 31/167 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + ++ TGG+PL+ Sbjct: 54 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCTAFI-DKGVRKLRLTGGEPLV-- 110 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI- 211 K + +++ L + + + S++ R EL +C V + Sbjct: 111 RKNIMHLIRQLSRHLKSGALDELTLTTNGSQL-----SRFADELAEC-GIRRINVSLDTL 164 Query: 212 -----HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGIN 248 H + + + I AGI + +V LK N Sbjct: 165 DPEKFH-----QITRWGDLPRVLEGIEAAQRAGIRVKINAVALKDFN 206 >gi|159037574|ref|YP_001536827.1| radical SAM domain-containing protein [Salinispora arenicola CNS-205] gi|157916409|gb|ABV97836.1| Radical SAM domain protein [Salinispora arenicola CNS-205] Length = 601 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 11/106 (10%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 P+ ++ P+ IL C + C +C+ + + G LS+ A Sbjct: 4 PLFADDRRPV--------SVILKLRGETCNIDCLYCYEKRK-EAPGGARLSADGAAQLTA 54 Query: 137 YIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + V GG+PL + ++L L +V + S Sbjct: 55 IFGARPV--AVELHGGEPLTIGRAAFAEILDRLAAQPNVVRVSMQS 98 >gi|148643115|ref|YP_001273628.1| coenzyme PQQ synthesis protein [Methanobrevibacter smithii ATCC 35061] gi|148552132|gb|ABQ87260.1| coenzyme PQQ synthesis protein, SAM family [Methanobrevibacter smithii ATCC 35061] Length = 232 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 46/120 (38%), Gaps = 11/120 (9%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R + C + C +C + + G +++ D AA+ ++ + FTGG+P Sbjct: 21 QRQIFVRFAGCNLNCSYCDTNDSKSEKSGKLMTVDDVLAAIENVR-TPDCHVISFTGGEP 79 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 + + + + ++IL P++I + I+ L + + H N Sbjct: 80 SLYP-----EFINEVARQTDLKIL---LETNGTLPEKI--DFIEKLDIVSLDIKLPEHFN 129 >gi|89896265|ref|YP_519752.1| hypothetical protein DSY3519 [Desulfitobacterium hafniense Y51] gi|89335713|dbj|BAE85308.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 441 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 28/212 (13%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFT 150 R P + +++ C + C CF S + YI + + + T Sbjct: 94 RQPTLVEIEVTEGCNLRCPVCF-MAANDFHPDPNPSLEALGEKYRYILRHTNSDTSIQLT 152 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P + + L +++ R I Q + ++ ++ R NP+ +Q L EAG I Sbjct: 153 GGEP--TTREDLADIIRLGREIG-FQAIEVNTNGVVI--GR-NPDYLQKLAEAGVS-GIY 205 Query: 211 IHAN----HPYE------FSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILA-NL 257 + + YE + AI+ AG+ ++ +++GIN+ E+L L Sbjct: 206 LQFDGLTGEVYEQIRGENLLPAKLKAIANCREAGVQVVLAMTVIEGINEKQLGEVLKFAL 265 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 V + I + A G+ F + + + Sbjct: 266 ANKDVIVGIA----YQ--PAFGSGRFDVPLSK 291 >gi|284163849|ref|YP_003402128.1| MiaB-like tRNA modifying enzyme [Haloterrigena turkmenica DSM 5511] gi|284013504|gb|ADB59455.1| MiaB-like tRNA modifying enzyme [Haloterrigena turkmenica DSM 5511] Length = 417 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 7/88 (7%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 +L + C C +C + + + ++ E A A I + E+ TG D + Sbjct: 126 ILPIARGCMSDCSYCITK-QATGKIDSPPIEENVEKARALI--HAGAKEIRITGQDTGVY 182 Query: 158 SHK----RLQKVLKTLRYIKHVQILRFH 181 +L ++L + I+ +R Sbjct: 183 GWDEGERKLHRLLSEICAIEGDFRVRVG 210 >gi|218290137|ref|ZP_03494299.1| RNA modification enzyme, MiaB family [Alicyclobacillus acidocaldarius LAA1] gi|218239846|gb|EED07035.1| RNA modification enzyme, MiaB family [Alicyclobacillus acidocaldarius LAA1] Length = 497 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 25/143 (17%), Positives = 50/143 (34%), Gaps = 12/143 (8%) Query: 73 EREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 E D + P + + R + + + C +C +C + + L Sbjct: 180 EVWDNAPETVEDWPK---LRKDRVRAWVNVQYGCNKFCTYCI-VPYTRGVERSRLPEDVL 235 Query: 132 EAALAYIQE-KSQIWEVIFTGGDPLI-LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 + +QE I + D + L ++L+ + I + +RF + +P Sbjct: 236 REVVELVQEGYQDITLLGQNVNDYGVDLGTTNFARLLRQVNSIPGIGWIRFTTS----NP 291 Query: 190 QRINPELIQCLKEAGKPVYIAIH 212 ELI + E+ + V IH Sbjct: 292 WNFTDELIDAIAES-ENVVEHIH 313 >gi|167769534|ref|ZP_02441587.1| hypothetical protein ANACOL_00868 [Anaerotruncus colihominis DSM 17241] gi|167668502|gb|EDS12632.1| hypothetical protein ANACOL_00868 [Anaerotruncus colihominis DSM 17241] Length = 470 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 4/88 (4%) Query: 91 HRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 Y +RI+ L L + C CR+C LS +D + +Q+ Sbjct: 78 RNYGNRIVMFAPLYLSNYCVNECRYCPYHHHNTHIARRQLSQEDIVREVVALQDMGHKRL 137 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + TG DP+ + + + +KT+ IKH Sbjct: 138 ALETGEDPVNCPIEYVLESIKTIYGIKH 165 >gi|170288910|ref|YP_001739148.1| radical SAM protein [Thermotoga sp. RQ2] gi|205829920|sp|B1LAW7|RLMN_THESQ RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|170176413|gb|ACB09465.1| radical SAM enzyme, Cfr family [Thermotoga sp. RQ2] Length = 343 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 43/214 (20%), Positives = 81/214 (37%), Gaps = 45/214 (21%) Query: 81 NNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFC-------FRREMVGSQKGTVLSSKDT 131 + + ++ ++ +PDRI + CPV C FC R G +LS + Sbjct: 85 EDGNTIESVMLFHPDRITACISTQVGCPVKCIFCATGMSGFVRNLTTGEIVAQILSMER- 143 Query: 132 EAALAYIQEKSQIWEVIFTG-GDPLILSHKRLQKV----LKTLRYIKHVQILRFHSRVPI 186 +EK +I V++ G G+PL+ ++ + K + I ++ + + + Sbjct: 144 -------EEKKKIGNVVYMGMGEPLLNYENTIKSIRILNHKKMGNIG-IRRITIST---V 192 Query: 187 VDPQRINPELIQCLKEAGKPVYIAIHANHP-----YEFSEEAIA-AISRL--------AN 232 P RI L E G V +A+ + P + +I + Sbjct: 193 GIPDRIIQ-----LAEEGLDVKLALSLHAPTNFKRDQLVPLNKKYSIEEILNAVKIYQRK 247 Query: 233 AGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 G + + VL++GIND+ L ++I Sbjct: 248 TGNRVTIEYVLIRGINDEISDAKKLAEILKNMKI 281 >gi|147919895|ref|YP_686354.1| putative molybdopterin biosynthesis protein A [uncultured methanogenic archaeon RC-I] gi|121685400|sp|Q0W3L5|MOAA_UNCMA RecName: Full=Probable molybdenum cofactor biosynthesis protein A gi|110621750|emb|CAJ37028.1| putative molybdopterin biosynthesis protein A [uncultured methanogenic archaeon RC-I] Length = 307 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 31/163 (19%), Positives = 68/163 (41%), Gaps = 25/163 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + L + C + C +C G + + + A +A I + + ++ F+GG+PL+ Sbjct: 15 ISLTNRCNLKCIYC---HNEGEEDSGSEITVEEVAQIARICARYGVDKIKFSGGEPLLRR 71 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPY 217 ++L+ L ++ V + + + + LKE+G V +++ + Sbjct: 72 D--FDEILRALPPMRDVSVTTNGT---------LLAARAESLKESGLDRVNVSLDSMDRD 120 Query: 218 EFS---------EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 F+ ++ + I + G+ + V LKGIN+D Sbjct: 121 RFTFITQCKGQFDKVLDGIDAALSVGLTPVKINMVYLKGINED 163 >gi|330810983|ref|YP_004355445.1| molybdenum cofactor biosynthesis protein A [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379091|gb|AEA70441.1| molybdenum cofactor biosynthesis protein A [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 322 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C +C + +V +Q LS++ +AY+ E + I + TGG+PL+ Sbjct: 15 ISLTSACNYACTYCVPDGKRLVAAQDE--LSAEAMARGVAYLIEAAGIERLRITGGEPLV 72 Query: 157 LSHKRLQKVLKTLRYI 172 +L++ + + + Sbjct: 73 SP--KLERFMTAVGQM 86 >gi|323188903|gb|EFZ74187.1| radical SAM superfamily protein [Escherichia coli RN587/1] Length = 419 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148 R++ + C +C FC F + + ++ E A + + + + I V Sbjct: 30 RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVY 89 Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 F GG P LS L +++ TLR + + RV D +RI+ Sbjct: 90 FGGGTPSALSAHDLARIINTLREKLPLAPDCEITIEGRVLNFDAERIDA 138 >gi|320014299|gb|ADV97870.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 326 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 27/162 (16%), Positives = 60/162 (37%), Gaps = 19/162 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + VC C +C + LS + ++ TGG+P + Sbjct: 17 LSITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAFAL-LGTEKIRLTGGEPSMRR 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHPY 217 ++ T+R ++ L + R+ ++ Q ++AG + +++ + P Sbjct: 76 D--FTDIIATIRQNPAIRTL-----AVTTNGYRLVRDVAQW-RDAGLTAINVSVDSMDPR 127 Query: 218 EFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250 +F + + I +AG + +VL++ +ND Sbjct: 128 QFHAITGQDKFYQVMQGIDAAFDAGFDKVKVNAVLMRDVNDR 169 >gi|237747112|ref|ZP_04577592.1| ribonucleoside-triphosphate reductase [Oxalobacter formigenes HOxBLS] gi|229378463|gb|EEO28554.1| ribonucleoside-triphosphate reductase [Oxalobacter formigenes HOxBLS] Length = 227 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 7/67 (10%) Query: 93 YPDRILLKLL-HVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIF 149 +P R+ + CP CR+C R + + G L + LA+++ + + E V+F Sbjct: 22 FPGRLAAVVFCQGCPWRCRYCHNRHLLPTGEGGRYL----WQDVLAWLKTRQGLLEGVVF 77 Query: 150 TGGDPLI 156 +GG+PL+ Sbjct: 78 SGGEPLL 84 >gi|187735295|ref|YP_001877407.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835] gi|187425347|gb|ACD04626.1| Radical SAM domain protein [Akkermansia muciniphila ATCC BAA-835] Length = 353 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 6/65 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154 + ++ C + CR C + E AL I + +++ ++ TGGDP Sbjct: 17 VFWEVTRACALACRHCRAVAQPRPHPDELTH----EEALRLIDQLAELRPPMLVLTGGDP 72 Query: 155 LILSH 159 ++ Sbjct: 73 VMRPD 77 >gi|73666881|ref|YP_302897.1| 2-methylthioadenine synthetase [Ehrlichia canis str. Jake] gi|123759460|sp|Q3YSK6|MIAB_EHRCJ RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|72394022|gb|AAZ68299.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ehrlichia canis str. Jake] Length = 441 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 31/142 (21%) Query: 56 IARQFI----PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111 I +Q I P + + +P E + + + + C +C F Sbjct: 118 IKKQVINIDFPVISKFDAIPVEEYTKNQETS--------------AFISVQEGCNKFCTF 163 Query: 112 CFRREMVGSQKGTVLSSKDTEAAL--AYIQEKSQIWEVIFTGGDP-LILSHKR-----LQ 163 C V S+ EA A + S I E+ G + + L Sbjct: 164 C-----VVPYTRGEEYSRTVEAIFNEALVLADSGIKEITLIGQNVNAYHGTYKGCEWDLG 218 Query: 164 KVLKTLRYIKHVQILRFHSRVP 185 K+++ + I +++ +R+ + P Sbjct: 219 KLIQHIAKIPNIERIRYTTSHP 240 >gi|158522869|ref|YP_001530739.1| molybdenum cofactor biosynthesis protein A [Desulfococcus oleovorans Hxd3] gi|158511695|gb|ABW68662.1| molybdenum cofactor biosynthesis protein A [Desulfococcus oleovorans Hxd3] Length = 330 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 31/168 (18%), Positives = 57/168 (33%), Gaps = 30/168 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQEKSQ--IWEVIFTGGD 153 + + C + C +C L+ D E L+ I+ + I +V TGG+ Sbjct: 19 VSVTDRCNLNCIYCNPSRY-----AKKLAHSDILTYEELLSIIEAGAGLGITKVRITGGE 73 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+ + ++ I + L + + + L++AG I I Sbjct: 74 PLVRKDA--CDFIGSVSAISGITDLSLTTNGVV------LADCAGRLRKAGVN-RINISL 124 Query: 214 NHPYE-----FSEEAI-----AAISRLANAGI-ILLSQSVLLKGINDD 250 + + I AG + V+++GINDD Sbjct: 125 DTLDRRRFKTITGHDRFDRVWKGIQAALKAGFSPVKLNMVVMRGINDD 172 >gi|84687002|ref|ZP_01014885.1| radical SAM domain protein [Maritimibacter alkaliphilus HTCC2654] gi|84664976|gb|EAQ11457.1| radical SAM domain protein [Rhodobacterales bacterium HTCC2654] Length = 315 Score = 38.2 bits (88), Expect = 2.0, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 35/86 (40%), Gaps = 1/86 (1%) Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134 EDP + SP + +P+ + +C + C C+ + ++ + Sbjct: 14 EDPKVTADGSPRATVALTHPETLWFNTGTLCNITCEGCYIESSPTNDALAYMTRGEVAGY 73 Query: 135 LAYIQEKS-QIWEVIFTGGDPLILSH 159 L I+ + + E+ FTGG+P + Sbjct: 74 LDQIKARGWPVTEIGFTGGEPFMNPD 99 >gi|158521211|ref|YP_001529081.1| radical SAM domain-containing protein [Desulfococcus oleovorans Hxd3] gi|158510037|gb|ABW67004.1| Radical SAM domain protein [Desulfococcus oleovorans Hxd3] Length = 306 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 31/179 (17%), Positives = 59/179 (32%), Gaps = 25/179 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +K + C C +C K ++ + + + + + EV +GG+P + Sbjct: 15 IKANYTCNSNCVYCCAGNR---GKQRAMTFDEIAENIQFFIDTYGVQEVCLSGGEPTVHR 71 Query: 159 H--KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA-N 214 L V LR H +RFH R Q L V + H Sbjct: 72 DFLSTLDFVRSKGLRTYLHTNGIRFHDRT--FAKQ------CAALVNRTL-VGFSFHTPG 122 Query: 215 HPYEFSEEAI------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 E + A I+ L + L + +V++K + +L+ + ++ Sbjct: 123 LCAELTGSAKTFGQRIDGIANLLAESVPLRTNTVIIKQNYRHLPAIVDLISSL---GVR 178 >gi|94968118|ref|YP_590166.1| radical SAM family Fe-S protein [Candidatus Koribacter versatilis Ellin345] gi|94550168|gb|ABF40092.1| Fe-S protein, radical SAM family [Candidatus Koribacter versatilis Ellin345] Length = 591 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 36/180 (20%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILS 158 CP +C FC G ++ ++ + I + + D P+ L+ Sbjct: 234 RGCPKHCSFCSVWR----TDGQKPRQRNFQSVIEEIVDLRRRGFRFIALADDNFYPVTLT 289 Query: 159 HKRLQKV---LKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 RL K + LR ++ ++ RFH L+ L K + Sbjct: 290 DLRLAKAQNNTEKLRNLEQIREERFH--------------LMAQLARLPKDMVFFTQIT- 334 Query: 216 PYEFSEEAI--AAISRLANAGIILLSQSVL---LKGI----NDDPEILANLMRTFVELRI 266 E +E+A A+ G ++ ++V LK + N + LA ++ F + Sbjct: 335 -MEAAEDAAFLDAMRAANIKGALVGVEAVTPEGLKAVYKDFNYSGDRLAQQLQEFRRHGV 393 >gi|39997325|ref|NP_953276.1| radical SAM domain-containing protein [Geobacter sulfurreducens PCA] gi|39984216|gb|AAR35603.1| radical SAM domain protein [Geobacter sulfurreducens PCA] gi|307634986|gb|ADI84985.2| radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter sulfurreducens KN400] Length = 342 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 40/189 (21%), Positives = 69/189 (36%), Gaps = 29/189 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-L 157 CP C FC + + G G + S+ + +A+ + + G L Sbjct: 10 FISHQGCPHRCVFCDQERIAGR-AGRLPSAAEIHSAVKTFGRGRPVEAAFYGGT--FTSL 66 Query: 158 SHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHA 213 +++L L+ ++H V+ +R +R P ++ E LK G V + + + Sbjct: 67 PRNEQERLLAALQPLRHDGSVRSVRLSTR-----PDALDAETAGFLKSMGVASVELGVQS 121 Query: 214 NHPYEFS--------EEAIAAISRLANAGIILLSQ-SVLLKGINDDPE-ILANLMRTF-- 261 + + A L + GI + +Q L G D E L +L R Sbjct: 122 MDDQVLDVSGRGHSAADTVRAFDVLRSEGIAVGAQLMPGLPG--DSRERSLDSLTRILDL 179 Query: 262 --VELRIKP 268 V LRI P Sbjct: 180 KPVSLRIYP 188 >gi|327398449|ref|YP_004339318.1| Radical SAM domain-containing protein [Hippea maritima DSM 10411] gi|327181078|gb|AEA33259.1| Radical SAM domain protein [Hippea maritima DSM 10411] Length = 351 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 33/210 (15%), Positives = 69/210 (32%), Gaps = 36/210 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 ++ C + C C + + LS +D + I E+ + V+ TGG+PL Sbjct: 10 FEITPRCNLNCIHCRTSASMNLED--RLSFEDITNIIEEISEQFKP-VVVLTGGEPL--- 63 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYE 218 L++ + + H + +R + I+ L +K+ V +++ + E Sbjct: 64 ---LREDVFDIADFIHSKGMRVG---LATNGTLIDEGLALKIKKHIDIVSLSLDGSTA-E 116 Query: 219 FSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 ++ A + L + + S K D E L + K Sbjct: 117 VHDDFRKVKGAFDATVRAANILRETSVEFIINSSFTKRNQSDIENTYRLAKFL---GAKA 173 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASLK 298 +Y+ + ++I L Sbjct: 174 WYMFM----------IVPTGRAEEIREELI 193 >gi|302342465|ref|YP_003806994.1| radical SAM domain protein [Desulfarculus baarsii DSM 2075] gi|301639078|gb|ADK84400.1| Radical SAM domain protein [Desulfarculus baarsii DSM 2075] Length = 414 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 36/84 (42%), Gaps = 10/84 (11%) Query: 95 DRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEV 147 + ++L + C C +C +R G G ++ +D + Y++E + Sbjct: 3 NHVVLDISGKCNARCTWCVTGYRNRQ-GVAYGRYMTPQDVAKVIDYLREQRIITPDAYFF 61 Query: 148 IFTGGDPLILSHKRLQKVLKTLRY 171 ++ G+PLI + ++++ L Sbjct: 62 LYNWGEPLI--NPHFAEIVEELNR 83 >gi|260910078|ref|ZP_05916759.1| BchE/P-methylase [Prevotella sp. oral taxon 472 str. F0295] gi|260635790|gb|EEX53799.1| BchE/P-methylase [Prevotella sp. oral taxon 472 str. F0295] Length = 456 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 46/211 (21%), Positives = 79/211 (37%), Gaps = 37/211 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + CP +C FC++ + G + +AAL I ++ D L+ S Sbjct: 168 LVVSRGCPHHCDFCYKDAFY--EGGKSFYTARVDAALKEIDALPGRH--LYFLDDHLLGS 223 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP-ELIQCLKEAG-KPVYIAIHA--- 213 + ++ + ++ + V F S + Q I +LI+ EAG + V+I Sbjct: 224 KRFAAELFEGMKGMNRV----FQSAATV---QSILEGDLIEKAAEAGMRSVFIGFETFSP 276 Query: 214 ------NHPYEFSEEAIAAISRLANAGIILLSQSVL-LKGINDDPEILANLMRTFVELRI 266 N + AA+ RL + GI++ V L DD ++ R V+ + Sbjct: 277 ENLKASNKCQNLQRDYSAAVKRLHSLGIMINGSFVFGLDH--DDADV----FRRTVDWGV 330 Query: 267 KP------YYLHHPDLAAGTSHFRLTIEEGQ 291 Y H GT F+ EG+ Sbjct: 331 DNAITTATY--HILTPYPGTRQFKRMEAEGR 359 >gi|148263280|ref|YP_001229986.1| radical SAM domain-containing protein [Geobacter uraniireducens Rf4] gi|146396780|gb|ABQ25413.1| Radical SAM domain protein [Geobacter uraniireducens Rf4] Length = 288 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 37/199 (18%), Positives = 64/199 (32%), Gaps = 40/199 (20%) Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYI 138 P G H R+ L + C + C +C RR G + + + Sbjct: 15 PCFGGNHHKNGRMHLAVAPRCNIKCGYCSRRHDCANESRPGVTSRLLTPQEAIVKVREVV 74 Query: 139 QEK---SQIWEVIFTG-GDPLILSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRI 192 I + G GDPL + + + L H+ + + P++I Sbjct: 75 ASDILGPIIKVIGIAGPGDPL-ANEETFETF--RLIGAEFPHLIKC-MSTNGLL-LPEKI 129 Query: 193 NPELIQCLKEAGKPVYIAI-----------HAN-HPYEFS-EEAIA-----AISRLANA- 233 +L+Q L V I H H + + EA + L A Sbjct: 130 --DLLQELDLHSLTVTINALDPRVGAKIYSHILYHGKKLTGTEAAEILIANQLEGLRRAA 187 Query: 234 --GIILLSQSVLLKGINDD 250 G+ + +V + G+N+D Sbjct: 188 AYGMTIKVNTVYIPGVNED 206 >gi|320451516|ref|YP_004203612.1| radical SAM enzyme, Cfr family [Thermus scotoductus SA-01] gi|320151685|gb|ADW23063.1| radical SAM enzyme, Cfr family [Thermus scotoductus SA-01] Length = 349 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 43/202 (21%), Positives = 68/202 (33%), Gaps = 49/202 (24%) Query: 93 YPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIW 145 Y +R + L + CP C FC + G L++ + + L I I Sbjct: 89 YENRKTVCLSSMVGCPAGCTFCATGAL---GFGRNLTAAEILSQLLAIAHHQGISPRDIR 145 Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN----------- 193 V+ G G+PL+ L VLK +R + H + + P+RI Sbjct: 146 NVVLMGMGEPLL----NLGNVLKAIRTM-------LHPKGLAMSPRRITLSTVGIPKGIH 194 Query: 194 ----PELIQCLK--------EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQS 241 +L L E + + H E E +R + Sbjct: 195 RLAEEDLGVRLALSLHAPDDETRRKIIPTAHRYSVGEILEAVRHYYARTKRRVTFEYT-- 252 Query: 242 VLLKGINDDPEILANLMRTFVE 263 LLKG+ND P A L+ ++ Sbjct: 253 -LLKGLNDHP-WQARLLAKLLK 272 >gi|310828575|ref|YP_003960932.1| Radical SAM domain protein [Eubacterium limosum KIST612] gi|308740309|gb|ADO37969.1| Radical SAM domain protein [Eubacterium limosum KIST612] Length = 294 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 42/231 (18%), Positives = 75/231 (32%), Gaps = 69/231 (29%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK---SQIWEVIFTGG--D 153 + + C C +C R K + AL I + V+ TG D Sbjct: 25 MNIYRGCCHGCIYCDSRSECYQNTDFDTVKKK-QDALRLIARDLKSKKKKGVVGTGAMSD 83 Query: 154 PLILSHKRLQKVL-KTLRYIKH-----------------VQIL-RFHSRVPIVDPQRIN- 193 P +R +++ + L+ I H + +L R S P++ I Sbjct: 84 PYN-PFERKERLTREALKLIDHYGFGVAIATKGSLVTRDIDLLSRIQSHSPVICKVTITA 142 Query: 194 -PELIQCLKEAGKPVYIAIHANHPYEFSEEAI--AAISRLANAGI---ILLSQSVLLKGI 247 + + + E G P + A+ L++AGI ILL +L I Sbjct: 143 ADDALSGIVEPGAP--------------PSSKRFEAVKALSDAGIYIGILL--MPILPFI 186 Query: 248 NDDPEILANLMRTFVELRIK---P------------YYLHHPDLAAGTSHF 283 D+ + + +++ + + P YY + D HF Sbjct: 187 EDNTDNIQSIVEQGAKCGARFIYPGFGVTLRDVQRDYYFNQLD-----QHF 232 >gi|239625448|ref|ZP_04668479.1| radical SAM domain-containing protein [Clostridiales bacterium 1_7_47_FAA] gi|239519678|gb|EEQ59544.1| radical SAM domain-containing protein [Clostridiales bacterium 1_7_47FAA] Length = 385 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 11/80 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + + C C C R S + E ++ I++ Q++ TGG+P I + Sbjct: 5 VIVTYRCNARCSMCNRY--------KAPSKPEEEISIETIRKLPQMYFTNITGGEPFIRT 56 Query: 159 HKRLQKVLKTLRYIKHVQIL 178 L+ +++ L IK +I+ Sbjct: 57 D--LKDIVRELY-IKSDRIV 73 >gi|317475092|ref|ZP_07934360.1| radical SAM superfamily protein [Bacteroides eggerthii 1_2_48FAA] gi|316908736|gb|EFV30422.1| radical SAM superfamily protein [Bacteroides eggerthii 1_2_48FAA] Length = 234 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 Y + +++ C + C C R G + + K L +++ I TG Sbjct: 4 LYIKNLCIEITRRCNMRCTHCMR----GDAESVDIPLKHISNLLRHVRH---IHHFNITG 56 Query: 152 GDPLILSHKRLQKVLKTLRY 171 G+P L+ + ++ +L+ +R Sbjct: 57 GEP-SLNVRAIRHILERVRA 75 >gi|124006098|ref|ZP_01690934.1| conserved hypothetical protein [Microscilla marina ATCC 23134] gi|123988275|gb|EAY27928.1| conserved hypothetical protein [Microscilla marina ATCC 23134] Length = 438 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 32/175 (18%), Positives = 65/175 (37%), Gaps = 34/175 (19%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C C FC G K S ++ A+ I + ++ EV+ TG Sbjct: 140 RTRTFLKVQDGCNYNCSFCTIPLARG--KSRSDSIENIIASAHKIGQT-EVKEVVLTG-- 194 Query: 154 PLILSH---------KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 + + +R ++K L + ++ +R S ++P ++ ++I ++ Sbjct: 195 -VNIGDFGIQEGRRKERFIDLVKALDEVDGLERIRISS----IEPNLLSNDVIAFTAQSK 249 Query: 205 KPVYIAIHANHP-YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 + H + P S + + A+ R G+ + D + LM Sbjct: 250 R---FVPHFHIPLQSGSNKILKAMRRRYERGLYV-----------DRVNKIKELM 290 >gi|52079259|ref|YP_078050.1| hypothetical protein BL03114 [Bacillus licheniformis ATCC 14580] gi|52784624|ref|YP_090453.1| hypothetical protein BLi00825 [Bacillus licheniformis ATCC 14580] gi|52002470|gb|AAU22412.1| conserved protein YfkA [Bacillus licheniformis ATCC 14580] gi|52347126|gb|AAU39760.1| putative protein [Bacillus licheniformis ATCC 14580] Length = 373 Score = 38.2 bits (88), Expect = 2.1, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 16/123 (13%) Query: 58 RQFIPQKEELNILPEERE-DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116 Q P E + + D GD + ++ +C + C C Sbjct: 5 MQARPITPEYDPWEAYMDVDQFGDIQLTNVE-----------FTTTTLCNMRCEHCAVGY 53 Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 + ++ L L I ++ + TGG+P +LS K +++ + L H + Sbjct: 54 TLQTKDPDALPVSLLLKRLDEI---PRLRSLSITGGEP-MLSLKSVKEYVVPLLKYAHER 109 Query: 177 ILR 179 +R Sbjct: 110 GVR 112 >gi|332796946|ref|YP_004458446.1| radical SAM domain-containing protein [Acidianus hospitalis W1] gi|332694681|gb|AEE94148.1| radical SAM domain protein [Acidianus hospitalis W1] Length = 322 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 28/160 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P K+ C ++C FC + + S++ + + ++ S I + F GG+ Sbjct: 23 PGYATFKVTSRCNLHCTFC--NPEYYNGELGEGSTETIKKIIDNLR-DSSIVVLSFEGGE 79 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 P I + L H + + R+N + + L + + +H Sbjct: 80 PTIRKD------ILELLEYAHDGSFYV---MLTTNGYRLNDD--EFLTKLADRIDF-LHY 127 Query: 214 N----HPYEFSEEAIAAISRL---ANAGIILLSQSVLLKG 246 + H + A+ L GI + Q+V+ + Sbjct: 128 SIDEYHWN------VKALDTLCRFRQYGIKVNVQTVVTRY 161 >gi|294852307|ref|ZP_06792980.1| molybdenum cofactor biosynthesis protein A [Brucella sp. NVSL 07-0026] gi|294820896|gb|EFG37895.1| molybdenum cofactor biosynthesis protein A [Brucella sp. NVSL 07-0026] Length = 329 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 14 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 70 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K + ++ L + + + S++ R EL C + + +++ Sbjct: 71 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 122 Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249 +P +F I AGI + +V LK ND Sbjct: 123 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 167 >gi|228920856|ref|ZP_04084195.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228838787|gb|EEM84089.1| Molybdenum cofactor biosynthesis protein A [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 337 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 32/167 (19%), Positives = 68/167 (40%), Gaps = 24/167 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++ C C +C E+ G + +L+ + E + ++ TGG+ Sbjct: 18 ISVIDRCNFRCTYCMPAEVFGPDYAFLQEEFLLTFDEIERLARLFISM-GVNKIRLTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI- 211 PL+ L +++ L ++ ++ + + + Q + LK+AG K V I++ Sbjct: 77 PLLRKD--LPQLIARLTKLEGLKDIGLTTNGIHLAKQ------AKALKDAGLKRVNISLD 128 Query: 212 ----H----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 H N ++ + I+ AG+ + V+ KG+ND Sbjct: 129 AIEDHVFKKINGRNVSTKPVLKGIAAAKAAGLEVKVNMVVKKGMNDS 175 >gi|149920929|ref|ZP_01909390.1| coproporphyrinogen III oxidase [Plesiocystis pacifica SIR-1] gi|149818201|gb|EDM77656.1| coproporphyrinogen III oxidase [Plesiocystis pacifica SIR-1] Length = 471 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 35/172 (20%), Positives = 59/172 (34%), Gaps = 34/172 (19%) Query: 94 PDRILLKLLHV--CPVYCRFC---FRREMVGSQKGTVLSS--KDTEAALAYI---QEKSQ 143 R L +HV C V C FC ++ LS+ + +A + Q + Sbjct: 68 DRRALFVYVHVPFCAVRCGFCNLFTQKHPPEELPARWLSTLFEQMDAVAEAVGVGQADTG 127 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV------DPQRINPELI 197 GG P L L+ +L LR RF +P P+ + + Sbjct: 128 FARWALGGGTPTFLEAGALEALLVRLRE-------RFGVDLPTTPSSVETSPETCTDDRL 180 Query: 198 QCLKEAG-KPVYIAIH---------ANHPYEFSEEAIAAISRLANAGIILLS 239 L+ AG + + I + P + A+AA+ R+ +L+ Sbjct: 181 AVLEAAGTRRISIGVQSFAEASLRAVGRPQ-AAPLAVAALDRIRARSFPILN 231 >gi|53804481|ref|YP_113916.1| tRNA-i(6)A37 modification enzyme MiaB [Methylococcus capsulatus str. Bath] gi|81682096|sp|Q608N1|MIAB_METCA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|53758242|gb|AAU92533.1| tRNA-i(6)A37 modification enzyme MiaB [Methylococcus capsulatus str. Bath] Length = 458 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 25/129 (19%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG-- 151 + + ++ C YC FC V S+ + +A I ++ + EV G Sbjct: 148 KAFVSVMEGCGKYCTFC-----VVPYTRGEEISRPVDDVIAEIVALAEQGVREVNLLGQN 202 Query: 152 --------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 D + L + + I +RF + P+ + LI+ ++ Sbjct: 203 VNAYRGVLADGGMADLALLMHYVAAVDGID---RIRFTTSHPV----EFSDALIEAFRDI 255 Query: 204 GKPVYIAIH 212 + +H Sbjct: 256 P-QLVSHLH 263 >gi|319789539|ref|YP_004151172.1| MiaB-like tRNA modifying enzyme [Thermovibrio ammonificans HB-1] gi|317114041|gb|ADU96531.1| MiaB-like tRNA modifying enzyme [Thermovibrio ammonificans HB-1] Length = 441 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 47/126 (37%), Gaps = 16/126 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTG 151 R +K+ C ++C +C + G + AL+ I+ + E++ TG Sbjct: 142 RTRAFVKVQQGCQLFCTYCIIPKARGPMVSLPP-----QEALSQIKRLVEAGYKEIVLTG 196 Query: 152 GDPLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 + L ++++ I + LR S V+P P LI+ + + K V Sbjct: 197 THLGAYGREFEGWSLARLVEEAVKIPGLYRLRLSS----VEPVEFTPHLIEVITGSEK-V 251 Query: 208 YIAIHA 213 H Sbjct: 252 APHYHV 257 >gi|229592098|ref|YP_002874217.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens SBW25] gi|229363964|emb|CAY51493.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens SBW25] Length = 322 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 30/160 (18%), Positives = 63/160 (39%), Gaps = 20/160 (12%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C +C + +V +Q LS++ + Y+ E + I + TGG+PL+ Sbjct: 15 ISLTSACNYACTYCVPNGKRLVAAQDE--LSAEAMARGVEYLIEAAGIDRLRITGGEPLV 72 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 +L+ + + + + + + Q + +L ++ K + +++ P Sbjct: 73 SP--KLEAFMGAVGQMG-LSDI-----SLTTNGQLLARKLPLLVEAGIKRINVSLDTLDP 124 Query: 217 YEFSEEAI--------AAISRLANAGIILLSQSVLLKGIN 248 F A + + AGI + V L+G N Sbjct: 125 DAFRSIARGGDLATVLDGMDQARAAGIKIKVNMVPLRGQN 164 >gi|188585891|ref|YP_001917436.1| molybdenum cofactor biosynthesis protein A [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350578|gb|ACB84848.1| molybdenum cofactor biosynthesis protein A [Natranaerobius thermophilus JW/NM-WN-LF] Length = 336 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 36/85 (42%), Gaps = 4/85 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C V +L+ +D E + + ++ FTGG+PL+ Sbjct: 21 ISVTDRCNLRCFYCMPTSGVEKMSHPQILNFEDIERIVTA-AANLGVSKIRFTGGEPLVR 79 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182 K++ T+ I ++ L + Sbjct: 80 KD--FSKLVNTISRIPGIEDLSLTT 102 >gi|50085046|ref|YP_046556.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ADP1] gi|49531022|emb|CAG68734.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ADP1] Length = 335 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 25/172 (14%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-----ALAYIQEKSQIWE 146 RY ++ + + C C +C + + KD ++ I + Sbjct: 12 RYKRKLRISVTDRCNFKCMYCM------PEHPEWIKKKDLLDFEALYLFCEFMVQNGIQK 65 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK- 205 + TGG+PL+ + + ++ L+ ++ + + R + + LK+AG Sbjct: 66 IRITGGEPLM--RQGVVHFVRDLQKLRSIGLKRIS----MTTNAHYLAKYAYDLKQAGLD 119 Query: 206 PVYIAIHANHPYEFSEEAIAA-------ISRLANAGIILLSQSVLLKGINDD 250 + I++ + +F + + I G+ +VL+KG NDD Sbjct: 120 DLNISLDSLDAQQFLKLTKKSIEPVLQGIQAAQLVGLPFKINTVLMKGKNDD 171 >gi|237720682|ref|ZP_04551163.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229449517|gb|EEO55308.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 436 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 69/227 (30%), Gaps = 71/227 (31%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--HHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G D + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 + L+ I+D+ + LMR Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLQLMRRQ--------- 267 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316 ++ E+ +++ ++++ G+ + ++ PG Sbjct: 268 --------------VSKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE 300 >gi|121997684|ref|YP_001002471.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halorhodospira halophila SL1] gi|229890553|sp|A1WVF7|MIAB_HALHL RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|121589089|gb|ABM61669.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Halorhodospira halophila SL1] Length = 474 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 16/118 (13%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153 + ++ C YC FC G + ++ D A + + E+ + EV G + Sbjct: 166 TAYVSVMEGCSKYCSFCVVPYTRGDEISRPVA--DVLAEVRSLAEQ-GVREVNLLGQNVN 222 Query: 154 --PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPI------VDPQRINPELIQCL 200 L L +++ + I + +RF + P +D R PEL L Sbjct: 223 AYAGALDDGERADLGLLIEAVARIPGIDRIRFTTSHPAEFHSGLIDAYRDVPELADFL 280 >gi|300867546|ref|ZP_07112196.1| Ribosomal protein S12 methylthiotransferase rimO [Oscillatoria sp. PCC 6506] gi|300334434|emb|CBN57366.1| Ribosomal protein S12 methylthiotransferase rimO [Oscillatoria sp. PCC 6506] Length = 439 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 60/170 (35%), Gaps = 35/170 (20%) Query: 92 RYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 RY L++ C C FC + G+Q+ + + A + + + Sbjct: 137 RYRTTPEAVAYLRIAEGCDYRCAFCIIPHLRGNQRSRTI--ESIVAEAEQLAAEGVKEII 194 Query: 148 IFT------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + + G D I +L ++L L + + +R H P P+++ ++ Sbjct: 195 LISQITTNYGKD--IYGEPKLAELLHALGKVD-IPWIRMHYAYPTGL----TPKVMAAIQ 247 Query: 202 EAGKPV-YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + Y+ + H + E + A++R G+ND Sbjct: 248 ETPNILPYLDLPLQHSH---PEILRAMNR------------PFQAGVNDS 282 >gi|294794074|ref|ZP_06759211.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 3_1_44] gi|294455644|gb|EFG24016.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 3_1_44] Length = 325 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L L C C +C E+ + +LS + L + V TGG+PL+ Sbjct: 16 VRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMNILGAF-HHIGVKAVRLTGGEPLL 74 Query: 157 LSHKRLQKVLKTLRY 171 ++++L ++ Sbjct: 75 YP--HIEELLGRIKE 87 >gi|284048541|ref|YP_003398880.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Acidaminococcus fermentans DSM 20731] gi|283952762|gb|ADB47565.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Acidaminococcus fermentans DSM 20731] Length = 236 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%) Query: 93 YPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFT 150 YP ++ L C + C +C E++ + + S+D E +AY+ + I + V+ + Sbjct: 14 YPGKVACTLFTGGCNLRCPYCHNSELLEGE----MPSQDMEEVMAYLDVRKGILDGVVIS 69 Query: 151 GGDPLILSHKRLQKVLKTLRY 171 GG+P + S L L L+ Sbjct: 70 GGEPCLQSD--LVPFLARLKE 88 >gi|15644025|ref|NP_229074.1| biotin synthase [Thermotoga maritima MSB8] gi|4981826|gb|AAD36344.1|AE001782_5 biotin synthetase, putative [Thermotoga maritima MSB8] Length = 348 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Query: 89 IVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 I +Y R +++ +VC C +C R + K ++ ++ + Sbjct: 42 IRRKYVGDEVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGA 101 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 V+ +G DP + + ++K ++ + Sbjct: 102 KTIVLQSGEDPYYMPD-VISDIVKEIKKM 129 >gi|307721435|ref|YP_003892575.1| Radical SAM domain-containing protein [Sulfurimonas autotrophica DSM 16294] gi|306979528|gb|ADN09563.1| Radical SAM domain protein [Sulfurimonas autotrophica DSM 16294] Length = 347 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 10/87 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + +VC C+FC + ++ +D +A + I + +P Sbjct: 47 INPTNVCADVCKFCAYSATRKNPNQYTMTHEDIMKIVAEVDAHGAKEVHIVSAHNP---- 102 Query: 159 HKRLQKVLKTLRYIK------HVQILR 179 + L L + IK HV+ L Sbjct: 103 NVTLDWYLGIFKKIKTAYPHLHVKALT 129 >gi|169335088|ref|ZP_02862281.1| hypothetical protein ANASTE_01495 [Anaerofustis stercorihominis DSM 17244] gi|169257826|gb|EDS71792.1| hypothetical protein ANASTE_01495 [Anaerofustis stercorihominis DSM 17244] Length = 309 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 31/206 (15%), Positives = 63/206 (30%), Gaps = 47/206 (22%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVY--------CRFCFRREMV 118 N P D + ++ + ++ L CP C FC + Sbjct: 4 WNGKPYYSLDYMLKERYN-------KKIYKVALNGGMTCPNRDGKIDTRGCIFCSK---- 52 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD---PL------ILSHKRLQKVLKTL 169 G + K + I +++I + L+K+ Sbjct: 53 GGSGD--FAGKGIDDITTQINNQAEILREKTNASNFIAYFQAYTNTYAPTDYLRKIYTEA 110 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANHPYEFSEE----- 222 ++ L +R P ++ E + L+E KP++I + E + E Sbjct: 111 LSHPNIVALSIATR-----PDCLDKEALDLLEELNNIKPIWIELGLQTINEKTAEYIRRG 165 Query: 223 -----AIAAISRLANAGIILLSQSVL 243 +A+ L GI ++ ++L Sbjct: 166 YPLSCFDSAVKELRKRGIEVIVHTIL 191 >gi|21230455|ref|NP_636372.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66769551|ref|YP_244313.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris pv. campestris str. 8004] gi|24211977|sp|Q8PBX1|MOAA_XANCP RecName: Full=Molybdenum cofactor biosynthesis protein A gi|81304494|sp|Q4URN0|MOAA_XANC8 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|21112018|gb|AAM40296.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66574883|gb|AAY50293.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris pv. campestris str. 8004] Length = 339 Score = 38.2 bits (88), Expect = 2.2, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 15/113 (13%) Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125 LP+ P+ D PL+ + L ++ C C +C + V G Sbjct: 2 LPDLSAAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGLDADQR 53 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 LS E + + ++ TGG+PL+ K L +++ L I+ ++ L Sbjct: 54 LSFDQLETLVRAFVA-VGVTKLRLTGGEPLL--RKNLPVLIQRLAAIEGIEDL 103 >gi|326408980|gb|ADZ66045.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis M28] gi|326538693|gb|ADZ86908.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis M5-90] Length = 329 Score = 38.2 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 14 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 70 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K + ++ L + + + S++ R EL C + + +++ Sbjct: 71 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 122 Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249 +P +F I AGI + +V LK ND Sbjct: 123 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 167 >gi|284161837|ref|YP_003400460.1| radical SAM protein [Archaeoglobus profundus DSM 5631] gi|284011834|gb|ADB57787.1| Radical SAM domain protein [Archaeoglobus profundus DSM 5631] Length = 375 Score = 38.2 bits (88), Expect = 2.3, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 7/76 (9%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTG 151 P + ++ C + C+ C +Q + + E I + + ++ TG Sbjct: 6 KPFIVFWEVTRACLLACKHC----RAKAQTKPHPNELNLEECYDLIDQLKKWNPLLIITG 61 Query: 152 GDPLILSHKRLQKVLK 167 GDPL+ L +L+ Sbjct: 62 GDPLMRKD--LFDILE 75 >gi|309389586|gb|ADO77466.1| Radical SAM domain protein [Halanaerobium praevalens DSM 2228] Length = 330 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 5/71 (7%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 + C + C C+R G GT L++ + + L I+ + +IF+GG+PL+ Sbjct: 9 TNKCNLSCPHCYRNA--GEDLGTELNTNEAKKMLDQIKA-ANFHLMIFSGGEPLLRDD-- 63 Query: 162 LQKVLKTLRYI 172 + +++ I Sbjct: 64 IFELMAYASAI 74 >gi|295115538|emb|CBL36385.1| MiaB-like tRNA modifying enzyme [butyrate-producing bacterium SM4/1] Length = 443 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 22/119 (18%), Positives = 41/119 (34%), Gaps = 17/119 (14%) Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAY-------IQEKS 142 R +K+ +C +C R + V+ + AA Y I S Sbjct: 142 HTRAFIKVQDGYNQFCSYCIIPYTRGRVRSRPMEDVVQEVEALAASGYKEIVLTGIHLSS 201 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + T +P + L ++ L I ++ +R S ++P+ I E + L Sbjct: 202 YGADFKRTAENPEAAAD--LLSLIVRLDRIPGIERIRLGS----LEPRIITDEFAETLA 254 >gi|291549884|emb|CBL26146.1| GTP cyclohydrolase subunit MoaA [Ruminococcus torques L2-14] Length = 329 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E + +L+ + E I + I ++ TGG+PL+ Sbjct: 14 ISVTDRCNLRCVYCMPEEGIEQLPHEQILTFDEIERVCR-ISTELGISKIKLTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182 K L +L ++ I ++ + + Sbjct: 72 -RKGLPDLLGKIKRIPGIEQVTLTT 95 >gi|317051924|ref|YP_004113040.1| Radical SAM domain-containing protein [Desulfurispirillum indicum S5] gi|316947008|gb|ADU66484.1| Radical SAM domain protein [Desulfurispirillum indicum S5] Length = 291 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 13/89 (14%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVIFT 150 ++ ++ H C C FC G K E L IQ + V Sbjct: 18 LIFQITHGCSHNACTFC------GMYTDKRFRMKPLETVLEEIQNIPAAYAATVRRVFLA 71 Query: 151 GGDPLILSHKRLQKVLKTL-RYIKHVQIL 178 GD I ++L +L L + +Q + Sbjct: 72 DGDATIYPTEKLTPILDALNAHFPALQRI 100 >gi|281412936|ref|YP_003347015.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10] gi|281374039|gb|ADA67601.1| Radical SAM domain protein [Thermotoga naphthophila RKU-10] Length = 348 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R +++ +VC C +C R + K ++ ++ + V+ +G DP Sbjct: 54 RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY 113 Query: 156 ILSHKRLQKVLKTLRYI 172 + + +++ ++ + Sbjct: 114 YMPD-VISDIVREIKKM 129 >gi|254293796|ref|YP_003059819.1| molybdenum cofactor biosynthesis protein A [Hirschia baltica ATCC 49814] gi|254042327|gb|ACT59122.1| molybdenum cofactor biosynthesis protein A [Hirschia baltica ATCC 49814] Length = 359 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 3/73 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C +C M K VLS ++ + + I ++ TGG+PL+ Sbjct: 46 LSITDRCDLRCTYCMPERMQFLPKSDVLSFEELTRLVDAFIAR-GITKLRVTGGEPLVRK 104 Query: 159 H--KRLQKVLKTL 169 + L K + L Sbjct: 105 DAIRLLSKFAERL 117 >gi|300860220|ref|ZP_07106307.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis TUSoD Ef11] gi|295112913|emb|CBL31550.1| molybdenum cofactor biosynthesis protein A, bacterial [Enterococcus sp. 7L76] gi|300849259|gb|EFK77009.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis TUSoD Ef11] Length = 321 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 10 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEDIKKVKLTG 66 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 67 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 95 >gi|168215418|ref|ZP_02641043.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens NCTC 8239] gi|182382388|gb|EDT79867.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens NCTC 8239] Length = 331 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%) Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C + +++ + + I +V TGG+PL+ Sbjct: 22 ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 79 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213 + + ++K + I ++ + + + + ++ L E G K V I++ Sbjct: 80 -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 132 Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + E + ++ + +I + + + +V+L+ N + + +L+ + I Sbjct: 133 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLAYKNPID- 189 Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320 F+ +T E +I+ K+ +S L P + + G GK+ Sbjct: 190 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKPLRLNGPAKYISIEGFKGKI 247 >gi|188992759|ref|YP_001904769.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris pv. campestris str. B100] gi|226707392|sp|B0RTE0|MOAA_XANCB RecName: Full=Molybdenum cofactor biosynthesis protein A gi|167734519|emb|CAP52729.1| Molybdenum cofactor biosynthesis protein A,probable [Xanthomonas campestris pv. campestris] Length = 339 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 15/113 (13%) Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125 LP+ P+ D PL+ + L ++ C C +C + V G Sbjct: 2 LPDLSAAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGLDADQR 53 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 LS E + + ++ TGG+PL+ K L +++ L I+ ++ L Sbjct: 54 LSFDQLETLVRAFVA-VGVTKLRLTGGEPLL--RKNLPVLIQRLAAIEGIEDL 103 >gi|110801520|ref|YP_699075.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens SM101] gi|123341686|sp|Q0SS32|MOAA_CLOPS RecName: Full=Molybdenum cofactor biosynthesis protein A gi|110682021|gb|ABG85391.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens SM101] Length = 323 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%) Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C + +++ + + I +V TGG+PL+ Sbjct: 14 ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213 + + ++K + I ++ + + + + ++ L E G K V I++ Sbjct: 72 -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 124 Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + E + ++ + +I + + + +V+L+ N + + +L+ + I Sbjct: 125 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLAYKNPID- 181 Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320 F+ +T E +I+ K+ +S L P + + G GK+ Sbjct: 182 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEGFKGKI 239 >gi|29375960|ref|NP_815114.1| molybdopterin cofactor biosynthesis protein A, putative [Enterococcus faecalis V583] gi|256965220|ref|ZP_05569391.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis HIP11704] gi|257419205|ref|ZP_05596199.1| predicted protein [Enterococcus faecalis T11] gi|29343422|gb|AAO81184.1| molybdopterin cofactor biosynthesis protein A, putative [Enterococcus faecalis V583] gi|256955716|gb|EEU72348.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis HIP11704] gi|257161033|gb|EEU90993.1| predicted protein [Enterococcus faecalis T11] Length = 324 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEDIKKVKLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98 >gi|4589922|dbj|BAA76928.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens] Length = 323 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 37/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%) Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C + +++ + + I +V TGG+PL+ Sbjct: 14 ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213 + + ++K + I ++ + + + + ++ L E G K V I++ Sbjct: 72 -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 124 Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + E + ++ + +I + + + +V+L+ N + + +L+ + I Sbjct: 125 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLAYKNPID- 181 Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320 F+ +T E +I+ K+ +S L P + + G GK+ Sbjct: 182 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKPLRLNGPAKYISIEGFKGKI 239 >gi|51595534|ref|YP_069725.1| molybdenum cofactor biosynthesis protein A [Yersinia pseudotuberculosis IP 32953] gi|149366845|ref|ZP_01888879.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis CA88-4125] gi|153948299|ref|YP_001401799.1| molybdenum cofactor biosynthesis protein A [Yersinia pseudotuberculosis IP 31758] gi|162421199|ref|YP_001605953.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis Angola] gi|165938348|ref|ZP_02226906.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Orientalis str. IP275] gi|166011582|ref|ZP_02232480.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Antiqua str. E1979001] gi|167400426|ref|ZP_02305939.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167419585|ref|ZP_02311338.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Orientalis str. MG05-1020] gi|170025144|ref|YP_001721649.1| molybdenum cofactor biosynthesis protein A [Yersinia pseudotuberculosis YPIII] gi|186894590|ref|YP_001871702.1| molybdenum cofactor biosynthesis protein A [Yersinia pseudotuberculosis PB1/+] gi|218928323|ref|YP_002346198.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis CO92] gi|229841099|ref|ZP_04461258.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar Orientalis str. PEXU2] gi|229843203|ref|ZP_04463349.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar Orientalis str. India 195] gi|229894040|ref|ZP_04509226.1| molybdopterin biosynthesis protein A [Yersinia pestis Pestoides A] gi|229903439|ref|ZP_04518552.1| molybdopterin biosynthesis protein A [Yersinia pestis Nepal516] gi|24211993|sp|Q8ZGW5|MOAA_YERPE RecName: Full=Molybdenum cofactor biosynthesis protein A gi|51588816|emb|CAH20430.1| molybdenum cofactor biosynthesis protein A [Yersinia pseudotuberculosis IP 32953] gi|115346934|emb|CAL19823.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis CO92] gi|149291219|gb|EDM41294.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis CA88-4125] gi|152959794|gb|ABS47255.1| molybdenum cofactor biosynthesis protein A [Yersinia pseudotuberculosis IP 31758] gi|162354014|gb|ABX87962.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis Angola] gi|165913726|gb|EDR32345.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Orientalis str. IP275] gi|165989530|gb|EDR41831.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Antiqua str. E1979001] gi|166962326|gb|EDR58347.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167050375|gb|EDR61783.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis biovar Antiqua str. UG05-0454] gi|169751678|gb|ACA69196.1| molybdenum cofactor biosynthesis protein A [Yersinia pseudotuberculosis YPIII] gi|186697616|gb|ACC88245.1| molybdenum cofactor biosynthesis protein A [Yersinia pseudotuberculosis PB1/+] gi|229679209|gb|EEO75312.1| molybdopterin biosynthesis protein A [Yersinia pestis Nepal516] gi|229689550|gb|EEO81611.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar Orientalis str. India 195] gi|229697465|gb|EEO87512.1| molybdopterin biosynthesis protein A [Yersinia pestis biovar Orientalis str. PEXU2] gi|229703925|gb|EEO90938.1| molybdopterin biosynthesis protein A [Yersinia pestis Pestoides A] gi|262361197|gb|ACY57918.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis D106004] gi|262365246|gb|ACY61803.1| molybdenum cofactor biosynthesis protein A [Yersinia pestis D182038] Length = 326 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 58/163 (35%), Gaps = 21/163 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + VC C +C + LS + ++ TGG+P + Sbjct: 17 LSITDVCNFRCTYCLPEGYRPDGVKSFLSLDEINRVSRAFAL-LGTEKIRLTGGEPSMRR 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216 ++ T+R ++ L + R+ ++ Q ++AG I + + P Sbjct: 76 D--FTDIIATIRQNPAIRTL-----AVTTNGYRLVRDVAQW-RDAGLT-AINVSVDSLDP 126 Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250 +F + + I +AG + +VL++ +ND Sbjct: 127 RQFHAITGQDKFYQVMQGIDAAFDAGFDKVKVNAVLMRDVNDR 169 >gi|228933203|ref|ZP_04096059.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] gi|228826364|gb|EEM72141.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar andalousiensis BGSC 4AW1] Length = 383 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 121 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H + + AI L I + +V+ D E +A L+ Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 181 Query: 261 F 261 Sbjct: 182 L 182 >gi|261343456|ref|ZP_05971101.1| molybdenum cofactor biosynthesis protein A [Providencia rustigianii DSM 4541] gi|282568603|gb|EFB74138.1| molybdenum cofactor biosynthesis protein A [Providencia rustigianii DSM 4541] Length = 326 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 26/162 (16%), Positives = 58/162 (35%), Gaps = 21/162 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + VC C +C S + L+ + +V TGG+P + Sbjct: 17 LSITDVCNFRCTYCLPDGYKPSGRHEFLTLDEIRRVSRAF-ADLGTEKVRITGGEPTMRK 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216 ++ +R + ++ + + R+ ++ ++AG + + + P Sbjct: 76 D--FSDIIAAIRENQSIKKI-----AVTTNGYRMARDIQTW-RDAGLN-AVNVSVDSLDP 126 Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGIND 249 +F+ + + I AG + +VL+K +ND Sbjct: 127 RQFAAITGQDKFFQVMQGIDAAFEAGFEKVKVNAVLMKNVND 168 >gi|212690677|ref|ZP_03298805.1| hypothetical protein BACDOR_00164 [Bacteroides dorei DSM 17855] gi|237725132|ref|ZP_04555613.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. D4] gi|265754350|ref|ZP_06089539.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 3_1_33FAA] gi|212666777|gb|EEB27349.1| hypothetical protein BACDOR_00164 [Bacteroides dorei DSM 17855] gi|229436398|gb|EEO46475.1| involved moaA/nifB/pqqE family protein [Bacteroides dorei 5_1_36/D4] gi|263235059|gb|EEZ20614.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 3_1_33FAA] Length = 498 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 38/192 (19%), Positives = 71/192 (36%), Gaps = 39/192 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIWEVIFTGGDPLI 156 L + C +C++C + S T+ + I Q+ +V GG+ + Sbjct: 146 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 200 Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212 ++ +LK L R I +++P+ +L+Q ++E G V I++ Sbjct: 201 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 249 Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261 A H + E + + L ++G+ SVL N +LA L+ Sbjct: 250 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQLNVLAELLHELS 308 Query: 262 -----VELRIKP 268 + RI P Sbjct: 309 HLKHIRDWRIIP 320 >gi|49477412|ref|YP_036045.1| coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar konkukian str. 97-27] gi|49328968|gb|AAT59614.1| coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar konkukian str. 97-27] Length = 377 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 64 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 65 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 115 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H + + AI L I + +V+ D E +A L+ Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 175 Query: 261 F 261 Sbjct: 176 L 176 >gi|291545179|emb|CBL18288.1| ribonucleoside-triphosphate reductase class III activase subunit [Ruminococcus sp. 18P13] Length = 168 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 31/93 (33%), Gaps = 9/93 (9%) Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 G N S + G P + CP +C C + + D LA I Sbjct: 7 GTENDSIVDG-----PGIRFTIFVQGCPHHCPGC---HNPQTHDFAGGTDTDCAQLLARI 58 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 + V F+GG+P L ++ LR Sbjct: 59 DANPLLDGVTFSGGEPFC-QASVLAELGAKLRQ 90 >gi|312116333|ref|YP_004013929.1| molybdenum cofactor biosynthesis protein A [Rhodomicrobium vannielii ATCC 17100] gi|311221462|gb|ADP72830.1| molybdenum cofactor biosynthesis protein A [Rhodomicrobium vannielii ATCC 17100] Length = 345 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 62/175 (35%), Gaps = 27/175 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + A + ++ TGG+PL+ Sbjct: 31 VSVTDRCDFRCVYCMPDRMQFLPKAELLTLEELDRLCAGFIA-KGVRKIRLTGGEPLM-- 87 Query: 159 HKRLQKVLKTLRY------IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAI 211 + L +++ L + V + SR+ E LK+AG + V I++ Sbjct: 88 RRNLLLLVRALSRHLDAGTLDEVTLTSNGSRM---------AEFAASLKDAGVRRVNISL 138 Query: 212 HANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDDPEILANLM 258 +F A I G+ + V LK IN+ L Sbjct: 139 DTRDADKFRAVTRRGDLAAVLAGIRAAKAVGLHVKINMVALKAINESEIEDMLLW 193 >gi|251790124|ref|YP_003004845.1| molybdenum cofactor biosynthesis protein A [Dickeya zeae Ech1591] gi|247538745|gb|ACT07366.1| molybdenum cofactor biosynthesis protein A [Dickeya zeae Ech1591] Length = 340 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 34/255 (13%), Positives = 76/255 (29%), Gaps = 47/255 (18%) Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L + VC C +C S + +V TGG+P + Sbjct: 29 LSITDVCNFRCTYCLPDGYQPNGATPHRFLSLSEIRRIGRAF-ADLGTEKVRLTGGEPSL 87 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215 +++ +R ++ L + R+ ++ ++AG + + + Sbjct: 88 RRDFV--EIIAAIRENPAIRTL-----AVTTNGYRLARDVASW-RDAGLT-ALNVSVDSL 138 Query: 216 -PYEFSE-----EAIAAISRLANAGI----ILLSQSVLLKGINDDPEILANLMRTFVELR 265 P +F + + + A + +VL++ +ND +L +R Sbjct: 139 DPRQFHAITGQDKFRQVMDGIDAAFANGFRRVKVNTVLMRDVNDS-----SLHTFLEWIR 193 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFY---------ILDLPGG 316 +P EG+++ + +SG + + G Sbjct: 194 TRP---IQLRFIELME-----TGEGREMFR--RHHVSGQVIRERLLQQGWLQQVRERSDG 243 Query: 317 YGKVKIDTHNIKKVG 331 +V +VG Sbjct: 244 PAQVFSHPDYQGEVG 258 >gi|229187971|ref|ZP_04315068.1| Coenzyme PQQ synthesis protein [Bacillus cereus BGSC 6E1] gi|228595507|gb|EEK53230.1| Coenzyme PQQ synthesis protein [Bacillus cereus BGSC 6E1] Length = 361 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 26/177 (14%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + +L C + C C R E + L+ ++ + + I E + ++FTGGDPL+ Sbjct: 2 IWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDNIYEMNNPM-LVFTGGDPLMR 59 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--------- 208 + + IK + +R S P P + E IQ KE G + Sbjct: 60 PD--IYDIAD--YAIK--KGVRV-SMTPSATPN-VTKETIQKAKEVGIARWAFSLDGPTA 111 Query: 209 -IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 I H +E + I AI L I + +V+ + E +A L+ Sbjct: 112 EIHDHFRGVEGSFELT---INAIRYLHELEIPIQINTVISNYNVNVLEDMAKLVEEL 165 >gi|23016109|ref|ZP_00055869.1| COG1964: Predicted Fe-S oxidoreductases [Magnetospirillum magnetotacticum MS-1] Length = 456 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 37/172 (21%), Positives = 63/172 (36%), Gaps = 35/172 (20%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIWEVIFTGGDP 154 L+++ C + C CF + G S + EA L + E V +GG+P Sbjct: 99 ALVEVTDSCGLDCPTCFAQSRPGR---GHRSLAEVEAMLDAVVRSEGGSPDIVQISGGEP 155 Query: 155 LILSHKRLQKVLKT--LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 ++ ++L+ R I+HV + R+ R +P+ L G + + Sbjct: 156 ADHP--QILEILRAAKARPIRHVMLNTNGVRL-----AR-DPDFATALAGLGPGFEVYLQ 207 Query: 213 ANHPYEFSEEA-------------IAAISRLANAGI--ILLSQSVLLKGIND 249 EA A++ L GI L+ V+ KG+ND Sbjct: 208 ---WDSLEPEALSVLRGADLREVRKGALAALDRHGISTTLVC--VMAKGVND 254 >gi|289432755|ref|YP_003462628.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. GT] gi|288946475|gb|ADC74172.1| MiaB-like tRNA modifying enzyme [Dehalococcoides sp. GT] Length = 416 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 24/128 (18%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R +K+ C +C +C RR ++S + A Y E++ Sbjct: 126 RTRSFIKIQDGCDNFCTYCIVPFVRRYKNCRGVDDIISEINLRQAEGY-------QEIVL 178 Query: 150 TGGDP--LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 TG + S L +++ + + LR S + P I L+ K Sbjct: 179 TGTEIGEYTSSGFNLAGLIEAILERTRIPRLRLSS----LQPNEITLPLLALWKNRRL-- 232 Query: 208 YIAIHANH 215 NH Sbjct: 233 -----CNH 235 >gi|297543929|ref|YP_003676231.1| Radical SAM domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296841704|gb|ADH60220.1| Radical SAM domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 453 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156 + + C + C +C++R+ K +S K ++ + I K + ++ GG+PL+ Sbjct: 89 IYVTTECNLNCPYCYQRD--YKSKNITISKKHVDSVVTTIDLLSKKENKHLVIFGGEPLL 146 Query: 157 LSHKRLQKVL-KTLRYIK-HVQILR 179 +K++ + + + I V+I+ Sbjct: 147 PQNKQIIEYMFDRFKTIDATVEIVT 171 >gi|289577626|ref|YP_003476253.1| radical SAM protein [Thermoanaerobacter italicus Ab9] gi|289527339|gb|ADD01691.1| Radical SAM domain protein [Thermoanaerobacter italicus Ab9] Length = 453 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 41/85 (48%), Gaps = 6/85 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156 + + C + C +C++R+ K +S K ++ + I K + ++ GG+PL+ Sbjct: 89 IYVTTECNLNCPYCYQRD--YKSKNITISKKHVDSVVTTIDLLSKKENKHLVIFGGEPLL 146 Query: 157 LSHKRLQKVL-KTLRYIK-HVQILR 179 +K++ + + + I V+I+ Sbjct: 147 PQNKQIIEYMFDRFKTIDATVEIVT 171 >gi|253575296|ref|ZP_04852634.1| radical SAM domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] gi|251845293|gb|EES73303.1| radical SAM domain-containing protein [Paenibacillus sp. oral taxon 786 str. D14] Length = 368 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 14/86 (16%) Query: 99 LKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGD-- 153 L +VC +C FC FR++ G + LS ++ +AY+++ + E GG Sbjct: 67 LYFTNVCESHCAFCSFRKDQ-GEEGAYTLSGEE---MVAYVKQHITPGVREFHIVGGHNN 122 Query: 154 --PLILSHKRLQKVLKTLRYIKHVQI 177 P L+ + + HV I Sbjct: 123 HVPFQYYVDSLKALKENF---PHVTI 145 >gi|163760609|ref|ZP_02167690.1| OmpA/MotB [Hoeflea phototrophica DFL-43] gi|162282224|gb|EDQ32514.1| OmpA/MotB [Hoeflea phototrophica DFL-43] Length = 588 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 22/73 (30%), Gaps = 19/73 (26%) Query: 13 DLYNANLIKKEQIDEIKEISNHYSIAL-----------TPVIANLINPHN--------PN 53 L + Q D I+ + Y + + +P +L N PN Sbjct: 59 TLQGLAPDPENQADAIETVRQTYGVRVVTDATGLLPVQSPYFLSLEKTENGLLLSGFAPN 118 Query: 54 DPIARQFIPQKEE 66 D RQ + E Sbjct: 119 DAARRQLVALLSE 131 >gi|15893169|ref|NP_360883.1| hypothetical protein RC1246 [Rickettsia conorii str. Malish 7] gi|81527850|sp|Q92G77|MIAB_RICCN RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|15620380|gb|AAL03784.1| unknown [Rickettsia conorii str. Malish 7] Length = 445 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%) Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + + L YP + + C +C FC V S++ E Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185 Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178 + +V+ +G ++L + L +LK L I +++ L Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239 Query: 179 RFHSRVPI 186 R+ + PI Sbjct: 240 RYTTSHPI 247 >gi|84688004|ref|ZP_01015867.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Maritimibacter alkaliphilus HTCC2654] gi|84663985|gb|EAQ10486.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium HTCC2654] Length = 443 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 9/97 (9%) Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVL--SSKDTEAALAYIQEKSQIWEVIF 149 L + C +C FC R V +L + + E + I Q Sbjct: 154 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPPERILREARELVERGVREITLLGQNVNAYH 213 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 GD L +++ L I ++ +RF + P Sbjct: 214 GAGDG---GDWSLARLIWALNDIDGLERIRFTTSHPN 247 >gi|317470624|ref|ZP_07930010.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA] gi|316901915|gb|EFV23843.1| radical SAM superfamily protein [Anaerostipes sp. 3_2_56FAA] Length = 453 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + CR+CF E +++S + + AL ++ E S EV F GG+PL Sbjct: 96 LHIAHDCNLACRYCFAEEGEYHGDRSMMSFEVGKQALDFLVENSGSRRNLEVDFFGGEPL 155 Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRF 180 + K+L ++L KH + RF Sbjct: 156 MNFEVVKQLVAYGRSLEE-KHSKKFRF 181 >gi|313674192|ref|YP_004052188.1| miab-like tRNA modifying enzyme [Marivirga tractuosa DSM 4126] gi|312940890|gb|ADR20080.1| MiaB-like tRNA modifying enzyme [Marivirga tractuosa DSM 4126] Length = 439 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 25/124 (20%), Positives = 54/124 (43%), Gaps = 12/124 (9%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C FC G + + ++ + I + E++ TG Sbjct: 140 RTRTFLKVQDGCNYHCAFCTIPLARGKSRSDTI--ENIVKSAKQIAS-EDVKEIVLTGVN 196 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GD I KR ++ + ++ + +V+ + RF R+ ++P + E+I+ + ++ + Sbjct: 197 TGDFGIQEGKRKERFVDLVKELDNVEGIDRF--RISSIEPNLLTNEIIEFVSQSKR---F 251 Query: 210 AIHA 213 H Sbjct: 252 VPHF 255 >gi|221067914|ref|ZP_03544019.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni KF-1] gi|220712937|gb|EED68305.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni KF-1] Length = 380 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 39/244 (15%), Positives = 78/244 (31%), Gaps = 46/244 (18%) Query: 99 LKLLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ ++LS ++ + ++ TGG+ Sbjct: 44 ISVTDRCNFRCNYCMPKEVFDKNYQYLPHSSLLSFEEITRLARLFVAH-GVRKLRLTGGE 102 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGK 205 PL+ K ++ ++ L + R P P + + LKEAG Sbjct: 103 PLL--RKNIEALIAQLAEL----------RTPDGLPLDLTLTTNASLLARKARALKEAGL 150 Query: 206 PVYIA-------IHANHPYEFSEEAIAAISRLANAGIILLSQ----SVLLKGINDDPEIL 254 + ++ + A LS V+ +G NDD + Sbjct: 151 NRVTVSLDGLDDAVFRRMNDVDFPVTDVLAGIEAAQATGLSHIKVNMVVKRGTNDD--QI 208 Query: 255 ANLMRTFVELRIKPYYLHHP-DLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILD 312 + R F I T+ +R+ + +++A L+ ++ P Sbjct: 209 LPMARYFRGTGIT--LRFIEYMDVGATNGWRMDEVLPSDEVIARLRAELP--LIP-LAPS 263 Query: 313 LPGG 316 PG Sbjct: 264 APGE 267 >gi|167746208|ref|ZP_02418335.1| hypothetical protein ANACAC_00913 [Anaerostipes caccae DSM 14662] gi|167654201|gb|EDR98330.1| hypothetical protein ANACAC_00913 [Anaerostipes caccae DSM 14662] Length = 442 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 6/87 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + CR+CF E +++S + + AL ++ E S EV F GG+PL Sbjct: 85 LHIAHDCNLACRYCFAEEGEYHGDRSMMSFEVGKQALDFLVENSGSRRNLEVDFFGGEPL 144 Query: 156 ILSH--KRLQKVLKTLRYIKHVQILRF 180 + K+L ++L KH + RF Sbjct: 145 MNFEVVKQLVAYGRSLEE-KHSKKFRF 170 >gi|229587170|ref|YP_002845671.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rickettsia africae ESF-5] gi|228022220|gb|ACP53928.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia africae ESF-5] Length = 445 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%) Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + + L YP + + C +C FC V S++ E Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185 Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178 + +V+ +G ++L + L +LK L I +++ L Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239 Query: 179 RFHSRVPI 186 R+ + PI Sbjct: 240 RYTTSHPI 247 >gi|162452546|ref|YP_001614913.1| hypothetical protein sce4270 [Sorangium cellulosum 'So ce 56'] gi|238066605|sp|A9F1Y8|RIMO_SORC5 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|161163128|emb|CAN94433.1| hypothetical protein sce4270 [Sorangium cellulosum 'So ce 56'] Length = 488 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 35/180 (19%), Positives = 67/180 (37%), Gaps = 26/180 (14%) Query: 64 KEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG 123 + L P E GD G +K+ C C FC ++ G+Q+ Sbjct: 120 ERMLVGNPAEWLIQAGDPRTLSTPG------GSAYVKIAEGCNRTCSFCVIPDLRGAQRS 173 Query: 124 TVLSS--KDTEA-ALAYIQEKSQI-WEVIFTGGDPLILSH----KRLQKVLKTLRYIKHV 175 + ++ E A A ++E + I + I G D S L ++++ + + V Sbjct: 174 RPIPDVVREVEQLAAAGVREINLISQDTIAYGRDAAGRSEGGARATLAQLVERVADVPGV 233 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHANHPYEFSEEAIAAISRLANAG 234 + +R + P+ + +L++ L + V Y+ + H A A+ R G Sbjct: 234 RWVRL----FYLYPETMTDDLVELLAGHPRVVPYVDMPLQH-------AADAMLRRMRRG 282 >gi|15807908|ref|NP_285567.1| hypothetical protein DR_A0244 [Deinococcus radiodurans R1] gi|6460688|gb|AAF12393.1|AE001863_18 conserved hypothetical protein [Deinococcus radiodurans R1] Length = 355 Score = 37.8 bits (87), Expect = 2.3, Method: Composition-based stats. Identities = 28/209 (13%), Positives = 63/209 (30%), Gaps = 38/209 (18%) Query: 97 ILLKLLHVCP-VYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGGD 153 ++++ C C FC F R+ S + + +A + E +++ + G+ Sbjct: 111 VVVQATRGCSWNRCTFCTFYRDRPFSVQAPDAFAAHLQAVAELLGEGARLRRSIFLADGN 170 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 L+LS+++L ++ R P R + + K V Sbjct: 171 ALMLSNRKLLPLIAQARA---------------AFPGREVHGFLDVFTGSRKTVA----- 210 Query: 214 NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIND---DPEILANLMRTFVELR--IKP 268 E + + G LL + D L+ + P Sbjct: 211 -DWRELRGAGVRRVYLGLETGHD-----PLLAWL-DKPGSAAQATELIHDLKAAGLNVAP 263 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 + G ++ + + +++ L Sbjct: 264 --IFMT-GVGGQTYAAAHLADTLRLLERL 289 >gi|315608055|ref|ZP_07883048.1| 2-methylthioadenine synthetase [Prevotella buccae ATCC 33574] gi|315250524|gb|EFU30520.1| 2-methylthioadenine synthetase [Prevotella buccae ATCC 33574] Length = 450 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 19/126 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS---KDTEAALAYIQEKSQIWEVIFT 150 R LK+ C +C +C G + ++S + EAAL E++ T Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVEQAREAALE------GGREIVLT 206 Query: 151 G---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 G GD +H+ ++K L ++ ++ R S ++P + EL++ + Sbjct: 207 GVNIGDFGATTHESFLDLVKALDEVEGIERFRISS----LEPDLCSDELVEYCSISR--- 259 Query: 208 YIAIHA 213 H Sbjct: 260 AFMPHF 265 >gi|308184088|ref|YP_003928221.1| hypothetical protein HPSJM_01540 [Helicobacter pylori SJM180] gi|308060008|gb|ADO01904.1| hypothetical protein HPSJM_01540 [Helicobacter pylori SJM180] Length = 418 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 36/94 (38%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLIL---SHKRLQKVLKTLRYIKHVQILRFHS 182 + + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDKESNIARLIKKLSQITGLKRIRIGS 221 >gi|291550955|emb|CBL27217.1| Organic radical activating enzymes [Ruminococcus torques L2-14] Length = 216 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 30/75 (40%), Gaps = 5/75 (6%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + C + C +C M ++ + E L Y+ E I V TGG+PL+ Sbjct: 21 AVFIRFKGCNLRCSYC--DTMWANEPDCQYKEETPEEILNYVLET-GIRNVTLTGGEPLL 77 Query: 157 LSHKRLQKVLKTLRY 171 +++++ L Sbjct: 78 QKD--IRELIHLLLQ 90 >gi|178847576|pdb|3CIX|A Chain A, X-Ray Structure Of The [fefe]-Hydrogenase Maturase Hyde From Thermotoga Maritima In Complex With Thiocyanate Length = 348 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R +++ +VC C +C R + K ++ ++ + V+ +G DP Sbjct: 54 RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY 113 Query: 156 ILSHKRLQKVLKTLRYI 172 + + ++K ++ + Sbjct: 114 YMPD-VISDIVKEIKKM 129 >gi|167032510|ref|YP_001667741.1| molybdenum cofactor synthesis domain-containing protein [Pseudomonas putida GB-1] gi|166858998|gb|ABY97405.1| molybdenum cofactor synthesis domain protein [Pseudomonas putida GB-1] Length = 322 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C +C + +V +Q LS+ +AY+ E + + + TGG+PLI Sbjct: 15 VSLTAACNYACTYCVPDGKRLVAAQDE--LSADSLARGVAYLIEAAGVERLRITGGEPLI 72 Query: 157 LSHKRLQKVLKTLRYIK 173 RL L + + Sbjct: 73 SP--RLDAFLAGVAKLD 87 >gi|104780794|ref|YP_607292.1| molybdenum cofactor biosynthesis protein A [Pseudomonas entomophila L48] gi|95109781|emb|CAK14486.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas entomophila L48] Length = 322 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C +C + +V +Q L++ +AY+ E + I + TGG+PLI Sbjct: 15 VSLTAACNYACTYCVPDGKRLVAAQDE--LTADALARGVAYLVEAAGIERLRITGGEPLI 72 Query: 157 LSHKRLQKVLKTLRYI 172 RL+ LK + + Sbjct: 73 SP--RLEAFLKAVAGL 86 >gi|327539767|gb|EGF26370.1| SSU ribosomal protein S12P methylthiotransferase [Rhodopirellula baltica WH47] Length = 476 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 16/118 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDP 154 LK+ C C FC + +G S E + + S + EV+ D Sbjct: 178 AYLKISEGCDRLCTFC----AIPKMRGKHFSKP-IEQIIDEAKRLGDSGVREVVIVAQDT 232 Query: 155 LILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 R L ++LK L I+ + +R P I+ LI L A + V Sbjct: 233 TYYGMDRYGEPRLNQLLKELDKIESIDWIRL----MYFYPMYIDDALIDTLASAKRIV 286 >gi|323694864|ref|ZP_08109017.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14673] gi|323501090|gb|EGB16999.1| Fe-S oxidoreductase [Clostridium symbiosum WAL-14673] Length = 486 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 14/74 (18%), Positives = 31/74 (41%), Gaps = 2/74 (2%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDPLIL 157 + CP +C +C + + K + S ++ YI + ++ EV+ D Sbjct: 213 IFTGRGCPAHCNYCVYPQTLHGHKYRLRSPENVVEEFEYIAKNFPEVHEVVIE-DDTFTA 271 Query: 158 SHKRLQKVLKTLRY 171 + +R+ K+ + L Sbjct: 272 NKERVIKICELLEE 285 >gi|299769674|ref|YP_003731700.1| molybdenum cofactor biosynthesis protein A [Acinetobacter sp. DR1] gi|298699762|gb|ADI90327.1| molybdenum cofactor biosynthesis protein A [Acinetobacter sp. DR1] Length = 343 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 64/168 (38%), Gaps = 31/168 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQ--EKSQIWEVIFTGGD 153 + + C C +C + L+ +D EA + + + I + TGG+ Sbjct: 26 ISVTDRCNFKCVYCM------PEHPEWLNKQDLLSFEALFQFCRFMVQQGIESIRITGGE 79 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK---PVYI- 209 PL+ + + ++ L+ +K + + R + + + LK+AG + + Sbjct: 80 PLM--RQGIVHFVRDLQALKALGLKRIS----MTTNGHYLAKYAKQLKDAGLDDLNISLD 133 Query: 210 ---AIHANHPYEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 +I E + E + I +AG+ VL+K NDD Sbjct: 134 SLDSIQF---KELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDD 178 >gi|260431178|ref|ZP_05785149.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Silicibacter lacuscaerulensis ITI-1157] gi|260415006|gb|EEX08265.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Silicibacter lacuscaerulensis ITI-1157] Length = 439 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 38/110 (34%), Gaps = 13/110 (11%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153 L + C +C FC G++ + + + A ++ + E+ G + Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRILREAQDLVER--GVREITLLGQNVN 206 Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 L ++ L I ++ +RF + P + +LI+ Sbjct: 207 AYHGAGPNGDMTLAGLIWELNRIDGLERIRFTTSHPND----MTDDLIEA 252 >gi|238650870|ref|YP_002916725.1| tRNA 2-methylthioadenosine synthase [Rickettsia peacockii str. Rustic] gi|238624968|gb|ACR47674.1| tRNA 2-methylthioadenosine synthase [Rickettsia peacockii str. Rustic] Length = 445 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%) Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + + L YP + + C +C FC V S++ E Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185 Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178 + +V+ +G ++L + L +LK L I +++ L Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239 Query: 179 RFHSRVPI 186 R+ + PI Sbjct: 240 RYTTSHPI 247 >gi|237711763|ref|ZP_04542244.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] gi|229454458|gb|EEO60179.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA] Length = 234 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 8/80 (10%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 Y + +++ C + C C R G + + K L +++ I TG Sbjct: 4 LYIKNLCIEITRRCNMRCTHCMR----GDAESVDIPLKHISNLLRHVRH---IHHFNITG 56 Query: 152 GDPLILSHKRLQKVLKTLRY 171 G+P L+ + ++ +L+ +R Sbjct: 57 GEP-SLNVRAIRHILERVRA 75 >gi|256391490|ref|YP_003113054.1| molybdenum cofactor biosynthesis protein A [Catenulispora acidiphila DSM 44928] gi|256357716|gb|ACU71213.1| molybdenum cofactor biosynthesis protein A [Catenulispora acidiphila DSM 44928] Length = 329 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 21/164 (12%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKS-QIWEVIFTGGDPLI 156 + L C + C +C E + K +LS ++ + I + ++ FTGG+PL+ Sbjct: 15 VSLTDRCNLRCTYCMPAEGLPWLPKAELLSDEEILRLIG-IAVHLLGVDQIRFTGGEPLV 73 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANH 215 L ++ + + + + L LK+AG V +++ Sbjct: 74 --RPGLATLVARVAQLDPRPRISLTTNALG------LARLAPTLKDAGLDRVNVSLDTLD 125 Query: 216 P---YEFSEEAIAA------ISRLANAGIILLSQSVLLKGINDD 250 P E + A + A + SVL++G+ND Sbjct: 126 PAVFRELTRRDRFADVVAGLEAAAAAGLTPVKVNSVLMRGVNDT 169 >gi|83590083|ref|YP_430092.1| radical SAM family protein [Moorella thermoacetica ATCC 39073] gi|83572997|gb|ABC19549.1| Radical SAM [Moorella thermoacetica ATCC 39073] Length = 470 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 42/233 (18%), Positives = 74/233 (31%), Gaps = 55/233 (23%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKG---TVLSSKDTEAALAYIQEKSQI-- 144 RY +L L C + C FC R+ + L ++ + L Y+ +I Sbjct: 11 ASRYN---ILPLTSTCNLGCLFCSHRQNPPGVETWRLQPLKGEEIDNLLDYLDGDRKIVI 67 Query: 145 --WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV---PIVDPQRINPELIQC 199 G+PL L I+ V+ RF R + + P LI+ Sbjct: 68 GESATRLIEGEPLTHPDF--------LAIIRKVRR-RF-PRARLEITTNGTLLTPNLIRE 117 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 L + +P+ I + N S E + N G L Q+ + Sbjct: 118 LADL-QPLEINLSLNSA---SPEGRRRLMGDRNPGAAL--QAPM---------------- 155 Query: 260 TFVELRIKPYYLHHPDLAA-----GTSHFR-LTIEEGQKIVASLKEKISGLCQ 306 + I ++ L A G FR + + +++ + G + Sbjct: 156 ALQQAGI----IYQGSLVACPWLVGWDDFRETILYLARAGARTIRVFLPGYTR 204 >gi|15613715|ref|NP_242018.1| coproporphyrinogen III oxidase [Bacillus halodurans C-125] gi|10173768|dbj|BAB04871.1| BH1152 [Bacillus halodurans C-125] Length = 498 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 35/164 (21%), Positives = 63/164 (38%), Gaps = 21/164 (12%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLS-----SKDT 131 I + + L + + + CP C +C F + + G+V + + Sbjct: 152 IVERQLAVLPDLDELDRGVSVYIGIPFCPTKCAYCTFPAYAINGKNGSVEAFLAGLHYEI 211 Query: 132 EAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLR----YIKHVQILRFHSRVPI 186 EA ++ + + V F GG P ++ +++ + +TL + V+ L V Sbjct: 212 EATGKWLTDHQIPVTTVYFGGGTPTSITAEQMDALYETLYDSFPAMNQVRELT----VEA 267 Query: 187 VDPQRINPELIQCLKEAGK-PVYIAIHANHPYEFSEEAIAAISR 229 P I PE I+ LK+ + I P F E + AI R Sbjct: 268 GRPDTITPEKIEVLKKWNVDRISIN-----PQSFENETLQAIGR 306 >gi|313891888|ref|ZP_07825490.1| six-Cys-in-45 modification radical SAM protein [Dialister microaerophilus UPII 345-E] gi|313119663|gb|EFR42853.1| six-Cys-in-45 modification radical SAM protein [Dialister microaerophilus UPII 345-E] Length = 477 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF + + ++S A+ ++ S EV F GG+PL Sbjct: 101 LNIAHDCNLRCKYCFAGQGGYGKWRMLMSFDVARRAIDFLIAHSGPRKHCEVDFFGGEPL 160 Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180 ++ +Q+ + +R + H +I+R Sbjct: 161 -MNWHVIQQTVTYIRQKERKHNKIVRL 186 >gi|228945522|ref|ZP_04107872.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|229121458|ref|ZP_04250685.1| Coenzyme PQQ synthesis protein [Bacillus cereus 95/8201] gi|228661922|gb|EEL17535.1| Coenzyme PQQ synthesis protein [Bacillus cereus 95/8201] gi|228814040|gb|EEM60311.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 383 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 121 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H + + AI L I + +V+ D E +A L+ Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 181 Query: 261 F 261 Sbjct: 182 L 182 >gi|167630431|ref|YP_001680930.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1] gi|238066299|sp|B0TIH8|RIMO_HELMI RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|167593171|gb|ABZ84919.1| miab-like tRNA modifying enzyme [Heliobacterium modesticaldum Ice1] Length = 460 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 37/232 (15%), Positives = 76/232 (32%), Gaps = 81/232 (34%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTV------LSSKDTEAALAYIQEKSQIWE 146 +K+ C C +C R + ++ L + + AL I + + + Sbjct: 163 AYVKIADGCDNRCGYCAIPNLRGRFRSRSEESIVEETRSLVDRGIQEAL-LIAQDTTCYG 221 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 V G RL +++ L I ++ +R P PELI+ + K Sbjct: 222 VDRYGE-------FRLAQLIGKLASIDGLRWIRL----MYCYPSHFTPELIEAMAAEPKV 270 Query: 207 V-YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 Y+ + H +E + +++R +AG+ Sbjct: 271 CRYVDLPLQHA---DDELLRSMNR--HAGV------------------------------ 295 Query: 266 IKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPF-YILDLPGG 316 +E ++++ +L+E++ GL +I+ LPG Sbjct: 296 ----------------------DEIRRLIRTLRERLPGLAIRTSFIVGLPGE 325 >gi|118575230|ref|YP_874973.1| Fe-S oxidoreductase [Cenarchaeum symbiosum A] gi|118193751|gb|ABK76669.1| Fe-S oxidoreductase [Cenarchaeum symbiosum A] Length = 304 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 44/116 (37%), Gaps = 14/116 (12%) Query: 98 LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPL 155 + ++ C C FC +M S++ + + + + + ++ V GD L Sbjct: 31 IFQVTLGCSFNQCSFC---DMYRSKEYSERPWEQVRSEIDLMARQMPDTKRVFLADGDAL 87 Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRI---NPELIQCLKEAGKPV 207 L + K+++ + ++ + P I + + + L+EAG + Sbjct: 88 NLDTDYMVKIVRHVKESFPSLERI-----SCYAMPMNILKKSDDELNRLREAGLDM 138 >gi|114326910|ref|YP_744067.1| radical SAM superfamily protein [Granulibacter bethesdensis CGDNIH1] gi|114315084|gb|ABI61144.1| radical SAM superfamily protein [Granulibacter bethesdensis CGDNIH1] Length = 331 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 27/168 (16%) Query: 91 HRY-PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--EV 147 RY P + + C + C +C ++ T LA I +++ + Sbjct: 26 SRYNPLLAQVVVTRRCNLACGYC-------NEYDTFSPPVPLPELLARIDHLAKLRTASI 78 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP- 206 FTGG+PL+ +L + ++ R + + I + R+ I L AG Sbjct: 79 TFTGGEPLLHP--QLDEAIRAARRHGMIVTM-------ITNGFRLTKAWIDRLNAAGLQG 129 Query: 207 VYIAIHANHPYEFS----EEAIAAISRLAN-AGIILLSQSVLLKGIND 249 + I+I P E S + LA A + SVL GI+D Sbjct: 130 MQISIDNLEPDEVSMKSLHSVEKKLGLLAEHAQFKVNVNSVL--GISD 175 >gi|53803496|ref|YP_114807.1| MoaA/NifB/PqqE family protein [Methylococcus capsulatus str. Bath] gi|53757257|gb|AAU91548.1| MoaA/NifB/PqqE family protein [Methylococcus capsulatus str. Bath] Length = 455 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 33/166 (19%), Positives = 62/166 (37%), Gaps = 25/166 (15%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-FTGGDPLI 156 +L++ C + C C+ G + S + L I E +V+ +GG+P + Sbjct: 102 VLEVTGHCNLRCPVCY--AGSGPDNPSYRSLDEIGRMLDTIVENEGEPDVVQISGGEPTL 159 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 R +LK R ++ L ++ ++ R +P+ + L E G + + + Sbjct: 160 HP--RFFDILKEARRRP-IRHLMVNTNGIVL--AR-DPDFARRLAEFGPGLEVYLQF--- 210 Query: 217 YEFSEEA-------------IAAISRLANAGIILLSQSVLLKGIND 249 + A+ L AGI + L KG+ND Sbjct: 211 DSLDDAVLRQLRGADLARIHEQALEHLNAAGISTSLVATLRKGLND 256 >gi|296447401|ref|ZP_06889327.1| molybdenum cofactor biosynthesis protein A [Methylosinus trichosporium OB3b] gi|296255104|gb|EFH02205.1| molybdenum cofactor biosynthesis protein A [Methylosinus trichosporium OB3b] Length = 360 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 33/168 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M + +L+ ++ + E+ ++ TGG+PL+ Sbjct: 44 VSVTDRCDFRCVYCMSEHMEFLPRRDLLTLEELDRLCTAFIERGT-RKLRITGGEPLMRR 102 Query: 159 H-----KRLQK-----VLKTLRYIKHVQILRFHS--------RVPIVDPQRINPELIQCL 200 +RL + +L L + L H+ + V ++PE + L Sbjct: 103 DISSLFRRLSRHLASGLLDELTLTTNGSQLERHAPALADCGVKRVNVSLDTLDPERFRAL 162 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 G +H +A I AG+ + +V LKG+N Sbjct: 163 TRTG---------DHAR-----VLAGIEAALAAGLQVKLNAVALKGVN 196 >gi|254292730|ref|YP_003058753.1| radical SAM protein [Hirschia baltica ATCC 49814] gi|254041261|gb|ACT58056.1| Radical SAM domain protein [Hirschia baltica ATCC 49814] Length = 314 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 22/124 (17%), Positives = 49/124 (39%), Gaps = 16/124 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW-EVIFTGGDPLIL 157 +C + C C+ + + L+ D ++ +++ E+ FTGG+P + Sbjct: 36 FNTGTLCNIECANCYIESSPTNDRLVYLTLADILPFFDELESENECGVEIGFTGGEPFMA 95 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVD---PQ---RINPELIQCLKEAGKPVYIAI 211 +++ L ++R HS + + + P RI LI + G + + + Sbjct: 96 P-----QIIDMLEE----SLVRGHSVLVLTNAMHPMMRPRIQAGLINLKERFGNQLTLRV 146 Query: 212 HANH 215 +H Sbjct: 147 SLDH 150 >gi|226954112|ref|ZP_03824576.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ATCC 27244] gi|226835153|gb|EEH67536.1| molybdopterin biosynthesis, protein A [Acinetobacter sp. ATCC 27244] Length = 343 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 42/229 (18%), Positives = 78/229 (34%), Gaps = 26/229 (11%) Query: 86 LKGIVHRY---PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 L + +Y ++ + + C C +C +K +LS + Y+ + Sbjct: 11 LPILQDQYARIKRKLRISVTDRCNFKCVYCMPEHPEWMKKQDLLSFEALFLFCQYMVSQ- 69 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 I + TGG+PL+ + + + L+ ++ + R I + Q LK Sbjct: 70 GIENIRITGGEPLM--RQGVVHFIAELQALRAEGLKRIS----ITTNAHYLTKYAQQLKN 123 Query: 203 AGKP-VYIA------IHAN--HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEI 253 AG + I+ E + +A I A + VL+KG NDD + Sbjct: 124 AGLDDLNISLDSLDPTQFKSLTKKELAP-VLAGIEAAKQAQLPFKINCVLMKGQNDDQIV 182 Query: 254 LANLMRTFVELRIKPYYLHHPDLAAGTSHFRLT--IEEGQKIVASLKEK 300 ++ P G H+ + E +I+ LK Sbjct: 183 PMVKWAKQQDI---PLRFIEFMPLDGDQHWSQQAVVSEA-EILEQLKAH 227 >gi|224536031|ref|ZP_03676570.1| hypothetical protein BACCELL_00895 [Bacteroides cellulosilyticus DSM 14838] gi|224522356|gb|EEF91461.1| hypothetical protein BACCELL_00895 [Bacteroides cellulosilyticus DSM 14838] Length = 439 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 29/151 (19%), Positives = 56/151 (37%), Gaps = 14/151 (9%) Query: 83 HSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS 142 HS R LK+ C +C +C G + ++S E A Sbjct: 137 HSFAPSCSRGDRTRYFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAE 193 Query: 143 QIWEVIFTG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 E++ TG GD + + ++K L ++ ++ R S ++P + E+I+ Sbjct: 194 GGKEIVLTGVNIGDFGKTTGETFFNLVKALDEVEGIERYRISS----IEPNLLTDEIIEF 249 Query: 200 LKEAGKPVYIAIHANHP-YEFSEEAIAAISR 229 + + H + P S+E + + R Sbjct: 250 VSHSR---SFMPHFHIPLQSGSDEVLKLMRR 277 >gi|146323515|ref|XP_754142.2| pentafunctional AROM polypeptide [Aspergillus fumigatus Af293] gi|129558252|gb|EAL92104.2| pentafunctional AROM polypeptide, putative [Aspergillus fumigatus Af293] Length = 748 Score = 37.8 bits (87), Expect = 2.4, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 41/162 (25%) Query: 113 FRREMVGSQKGTVLSSK--------DTEAALAYIQEKSQIWEVIFTGGDPLIL------- 157 F R + G G+ SS+ + L ++ E++ +G D + L Sbjct: 194 FIRRIYGLSHGSPFSSEVSPEVHTFALQVPLDWLDSYKDP-EILDSGADAITLLIDADVD 252 Query: 158 -SHK-RLQKVLKTLRYIKHVQILRFHSRVPIV-----DPQRINP--ELIQCLKEAGKPVY 208 + RL+ L H+ LR HSRVP+V P++I+ +++ L P Sbjct: 253 GKDQNRLKSQLAR-----HMATLRLHSRVPVVVDLGFSPRKIDTYRSVLEMLLRL-VPDA 306 Query: 209 IAIHANHPYEF------SEEAIAAISRLANA---GIILLSQS 241 + + P E ++ +I I+ + GI + SQ+ Sbjct: 307 VTCSLSCPDEIIQWLNTTKGSIKTIATWHQSTPLGIDV-SQT 347 >gi|331090885|ref|ZP_08339729.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae bacterium 2_1_46FAA] gi|330405531|gb|EGG85062.1| ribosomal protein S12 methylthiotransferase rimO [Lachnospiraceae bacterium 2_1_46FAA] Length = 440 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 14/115 (12%) Query: 97 ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIFT 150 LK+ C +C +C R +L + E + + +Q E Sbjct: 146 AYLKIAEGCDKHCTYCIIPKIRGNFRSVPMERLLKEAEGLAEQGVKELILVAQ--ETTLY 203 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D I K L K+LK L + +Q +R P+ I ELIQ +KE K Sbjct: 204 GKD--IYGEKSLHKLLKELCKVSGIQWIRI----LYCYPEEITDELIQVMKEEKK 252 >gi|329121946|ref|ZP_08250559.1| radical SAM domain protein [Dialister micraerophilus DSM 19965] gi|327467392|gb|EGF12891.1| radical SAM domain protein [Dialister micraerophilus DSM 19965] Length = 477 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 6/87 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF + + ++S A+ ++ S EV F GG+PL Sbjct: 101 LNIAHDCNLRCKYCFAGQGGYGKWRMLMSFDVARRAIDFLIAHSGPRKHCEVDFFGGEPL 160 Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180 ++ +Q+ + +R + H +I+R Sbjct: 161 -MNWHVIQQTVTYIRQKERKHNKIVRL 186 >gi|320167238|gb|EFW44137.1| molybdenum cofactor synthesis 1 isoform 1 [Capsaspora owczarzaki ATCC 30864] Length = 517 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 21/120 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C V S G +L++ + LA + + ++ TGG+P + Sbjct: 47 ISLTERCNLRCVYCMPEHGVELSPNGALLTTDEIIR-LAQLFVSQGVDKIRLTGGEPTVR 105 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPI---VDPQRINPELIQCLKEAGKPVYIAIHAN 214 L +++ L I ++ + + + PQ L++AG H N Sbjct: 106 KD--LVPLVERLGQIDGLKSIALTTNGIVLGRYLPQ---------LQKAGL-----THLN 149 >gi|317180090|dbj|BAJ57876.1| hypothetical protein HPF32_0294 [Helicobacter pylori F32] Length = 418 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + + + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|317177100|dbj|BAJ54889.1| hypothetical protein HPF16_0292 [Helicobacter pylori F16] Length = 418 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + + + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|298484173|ref|ZP_07002339.1| 2-methylthioadenine synthetase [Bacteroides sp. D22] gi|298269677|gb|EFI11272.1| 2-methylthioadenine synthetase [Bacteroides sp. D22] Length = 436 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 70/227 (30%), Gaps = 71/227 (31%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G D + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 + L+ I+D+ + LMR Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLQLMRRQ--------- 267 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316 ++ E+ +++ ++++ G+ + ++ PG Sbjct: 268 --------------VSKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE 300 >gi|294792210|ref|ZP_06757358.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 6_1_27] gi|294457440|gb|EFG25802.1| molybdenum cofactor biosynthesis protein A [Veillonella sp. 6_1_27] Length = 321 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L L C C +C E+ + +LS + L + V TGG+PL+ Sbjct: 12 VRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMTILGAF-HHIGVKAVRLTGGEPLL 70 Query: 157 LSHKRLQKVLKTLRY 171 ++++L ++ Sbjct: 71 YP--HIEELLGRIKE 83 >gi|317132913|ref|YP_004092227.1| MiaB-like tRNA modifying enzyme YliG [Ethanoligenens harbinense YUAN-3] gi|315470892|gb|ADU27496.1| MiaB-like tRNA modifying enzyme YliG [Ethanoligenens harbinense YUAN-3] Length = 451 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 13/136 (9%) Query: 99 LKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 LK+ C +C +C R ++ + AA + + G D Sbjct: 152 LKIAEGCDNHCTYCIIPKLRGRYRSRPLDDLVREAEQLAARGVRELTLVAQDTTRYGTD- 210 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIAIHA 213 L + L ++L+ I + +R P+ ++ ELI + K V Y+ + Sbjct: 211 LSGGKRMLPELLRRFCRIDGLHWVRL----LYCYPEALDDELIDTIASEEKVVPYLDMPI 266 Query: 214 NHPYEFSEEAIAAISR 229 H S + A++R Sbjct: 267 QH---VSPRVVRAMNR 279 >gi|282850584|ref|ZP_06259963.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula ATCC 17745] gi|282580077|gb|EFB85481.1| molybdenum cofactor biosynthesis protein A [Veillonella parvula ATCC 17745] Length = 321 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 16/75 (21%), Positives = 31/75 (41%), Gaps = 3/75 (4%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L L C C +C E+ + +LS + L + V TGG+PL+ Sbjct: 12 VRLSLTDACNFCCPYCRPAEITPQSQTQLLSVDEWMTILGAF-HHIGVKAVRLTGGEPLL 70 Query: 157 LSHKRLQKVLKTLRY 171 ++++L ++ Sbjct: 71 YP--HIEELLGRIKE 83 >gi|261839141|gb|ACX98906.1| hypothetical protein HPKB_0296 [Helicobacter pylori 52] Length = 418 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + + + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|261837731|gb|ACX97497.1| hypothetical protein KHP_0283 [Helicobacter pylori 51] Length = 418 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + + + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQIAGLKRIRIGS 221 >gi|170289997|ref|YP_001736813.1| radical SAM domain-containing protein [Candidatus Korarchaeum cryptofilum OPF8] gi|170174077|gb|ACB07130.1| Radical SAM domain protein [Candidatus Korarchaeum cryptofilum OPF8] Length = 329 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 14/75 (18%), Positives = 31/75 (41%), Gaps = 6/75 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ + C + C +C+ + + L ++ L S I + +TGG+ Sbjct: 7 PSWLIWMITASCNLNCPYCYSTHYL---RERPLGREEVMRLLRE-AASSGIKHIDYTGGE 62 Query: 154 PLILSHKRLQKVLKT 168 PL + ++L+ Sbjct: 63 PLTRRD--ISEILEE 75 >gi|91201841|emb|CAJ74901.1| similar to nirJ/moaA/ppqE family of cofactor synthesis proteins [Candidatus Kuenenia stuttgartiensis] Length = 359 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 9/88 (10%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 E +D + P G + ++ + + C + C+ C+ KG L S+DT Sbjct: 3 EYVKDSLSKKGCRPFSGAI------VIWNITNNCNLTCKHCY--AYANQIKGKELGSEDT 54 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSH 159 + + ++ S + I +GG+PL+ Sbjct: 55 ISLIQQFKQ-SAVKLAILSGGEPLMRKD 81 >gi|298373887|ref|ZP_06983845.1| radical SAM domain-containing protein [Bacteroides sp. 3_1_19] gi|298268255|gb|EFI09910.1| radical SAM domain-containing protein [Bacteroides sp. 3_1_19] Length = 440 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 36/185 (19%), Positives = 66/185 (35%), Gaps = 30/185 (16%) Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR--REMV 118 +P KE I P+ +D N SPL I P RI + C + C+ CF Sbjct: 83 VPTKESFCI-PDFYKD---KKNLSPLTEIS---PGRIDFVITKHCNLACKHCFEGASPKF 135 Query: 119 GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 G ++ + + I + + TGG+P + + ++L L +H + + Sbjct: 136 GIREYGIDVFSRIFSEFDRI----NLKTLKITGGEPFTVPN--FDQILLELSK-RHFETI 188 Query: 179 RFHSRVPIVDPQRINPELIQCLKEAGKPVYIA-------IH-ANHPYEFSEEAIAAISRL 230 + + I I+ L+ + I+ H + + RL Sbjct: 189 ------VLTNGMLIKDRDIEILRLGDIHLGISLDGLDSETHDFTRGKGAFDVISRQLLRL 242 Query: 231 ANAGI 235 +AG+ Sbjct: 243 RDAGV 247 >gi|212696574|ref|ZP_03304702.1| hypothetical protein ANHYDRO_01112 [Anaerococcus hydrogenalis DSM 7454] gi|212676430|gb|EEB36037.1| hypothetical protein ANHYDRO_01112 [Anaerococcus hydrogenalis DSM 7454] Length = 474 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 6/121 (4%) Query: 59 QFIPQKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCF 113 Q + ++ +L + ED + D S K + + Y +RI+L + C C +C Sbjct: 48 QGLSHRDAFVLLSCQEED-LNDEIFSLAKKLKEKFYGNRIVLFAPLYLSNYCVNGCLYCP 106 Query: 114 RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173 + LS + + +Q+ + TG DP+ + + + +KT+ IK Sbjct: 107 YHAKNKTIPRRKLSQDEIRKEVIALQDLGHKRLALETGEDPVNNPIEYVLESIKTIYSIK 166 Query: 174 H 174 H Sbjct: 167 H 167 >gi|157829079|ref|YP_001495321.1| hypothetical protein A1G_06820 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165933804|ref|YP_001650593.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Rickettsia rickettsii str. Iowa] gi|229890634|sp|B0BVC7|MIAB_RICRO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|229890635|sp|A8GTT8|MIAB_RICRS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|157801560|gb|ABV76813.1| hypothetical protein A1G_06820 [Rickettsia rickettsii str. 'Sheila Smith'] gi|165908891|gb|ABY73187.1| tRNA 2-methylthioadenosine synthase [Rickettsia rickettsii str. Iowa] Length = 445 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%) Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + + L YP + + C +C FC V S++ E Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185 Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178 + +V+ +G ++L + L +LK L I +++ L Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239 Query: 179 RFHSRVPI 186 R+ + PI Sbjct: 240 RYTTSHPI 247 >gi|167039016|ref|YP_001662001.1| radical SAM domain-containing protein [Thermoanaerobacter sp. X514] gi|300913395|ref|ZP_07130712.1| Radical SAM domain protein [Thermoanaerobacter sp. X561] gi|307723590|ref|YP_003903341.1| Radical SAM domain-containing protein [Thermoanaerobacter sp. X513] gi|166853256|gb|ABY91665.1| Radical SAM domain protein [Thermoanaerobacter sp. X514] gi|300890080|gb|EFK85225.1| Radical SAM domain protein [Thermoanaerobacter sp. X561] gi|307580651|gb|ADN54050.1| Radical SAM domain protein [Thermoanaerobacter sp. X513] Length = 427 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 6/72 (8%) Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--I 144 +GI P + C + C CF S K L+ TE +++ + I Sbjct: 85 EGIQKIGPTIAYFHITQRCNLNCPTCF----TFSPKRNKLNDMPTEKVKEVLRKIKEFGI 140 Query: 145 WEVIFTGGDPLI 156 EVIF+GG+P + Sbjct: 141 NEVIFSGGEPFL 152 >gi|37526620|ref|NP_929964.1| hypothetical protein plu2730 [Photorhabdus luminescens subsp. laumondii TTO1] gi|36786052|emb|CAE15104.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii TTO1] Length = 354 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 3/80 (3%) Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIW 145 G +YP+ + + C C+ C LS + + +A+ + + Sbjct: 6 PGYWEQYPNTATVITTYTCNAACKECC--FECNPSVKARLSLDEIKQFIAHSKANFPGLK 63 Query: 146 EVIFTGGDPLILSHKRLQKV 165 V+F+GG+ +L ++ + Sbjct: 64 LVVFSGGECFLLGKDLIEAI 83 >gi|1171709|sp|P24427|NIFB_RHILT RecName: Full=FeMo cofactor biosynthesis protein nifB Length = 490 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 12/118 (10%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRRE------MVGSQKGTVLSSKDTEAALAYIQEKSQ 143 H Y R+ L + C + C +C R+ G + + A+A E Q Sbjct: 59 AHLYFARMHLAVASACNIQCNYCNRKYDCANESRPGVASHRLTPDQALRRAIAVANEVPQ 118 Query: 144 IWEVIFTG-GDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQC 199 + V G GD ++ + L + R I V++ + P+ + +L+ Sbjct: 119 LSVVGIAGPGDA-CYDWRKTKATLIPIAREIPDVKLC-ISTNGLA-LPEHV-DDLVDM 172 >gi|21698998|dbj|BAC02731.1| moaA / nifB / pqqE family [Bacillus licheniformis] Length = 385 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 62/180 (34%), Gaps = 20/180 (11%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 + P ++ +L C + C C + L+ K+ + + I ++ TG Sbjct: 8 KSPFIVIWELTRACELKCLHCRASAQ-NKRDPRELTLKEGKDLIDQIHAMDNPL-LVLTG 65 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--- 208 GDPL + +++ + +R S P P + E IQ KE G + Sbjct: 66 GDPL-MRDDVFA-IIEYAVQ----KGVRV-SMTPSATPN-VTREAIQSAKEIGLSRWAFS 117 Query: 209 -------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 I H + + AI + + L +V+ D + +A L+ Sbjct: 118 LDGPTREIHDHFRGTDGSFDLTMKAIRYIHECHLPLQINTVISAYNIDYLDEMAKLIEEL 177 >gi|119384986|ref|YP_916042.1| molybdenum cofactor biosynthesis protein A [Paracoccus denitrificans PD1222] gi|166217887|sp|A1B4A2|MOAA_PARDP RecName: Full=Molybdenum cofactor biosynthesis protein A gi|119374753|gb|ABL70346.1| GTP cyclohydrolase subunit MoaA [Paracoccus denitrificans PD1222] Length = 344 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 37/178 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMQFLPKRDLLTLEELDRLCSAFVG-LGVRKLRVTGGEPLVRR 87 Query: 159 H---------KRLQKVLKTLRYIKHVQIL-RFHS-------RVPIVDPQRINPELIQCLK 201 + + L L L + L RF + R V ++ + + Sbjct: 88 NIMEFFRAMSRHLGAGLDELTLTTNGSQLARFATELADCGVRRVNVSLDTLDEDRFARIT 147 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 G+ + + I AG+ + +V LKG N+D L R Sbjct: 148 RWGR--------------LPQVLQGIEAAKAAGMRVKINTVALKGFNED-----ELFR 186 >gi|332300071|ref|YP_004441992.1| Ribosomal RNA large subunit methyltransferase N [Porphyromonas asaccharolytica DSM 20707] gi|332177134|gb|AEE12824.1| Ribosomal RNA large subunit methyltransferase N [Porphyromonas asaccharolytica DSM 20707] Length = 341 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 45/193 (23%), Positives = 77/193 (39%), Gaps = 38/193 (19%) Query: 95 DRILLKLL--HVCPVYCRFCFRREMVGSQK-GTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 DR L + C + C FC M G Q G LS+ + + + E +++ ++F G Sbjct: 100 DRATLCVSSQRGCKMNCLFC----MTGKQGFGANLSASEILNQILSVPEVNELTNIVFMG 155 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN-------PELIQCLKEA 203 G+P+ + +L+ +R + + + P+RI P L + L+E Sbjct: 156 MGEPM----DNIDTLLQVIRCLTD-------PKGLAMSPKRITVSTIGLRPGLERFLEEC 204 Query: 204 GKPVYIAIHANHPYE-FSEEAIAAISRLANAGIILLS-----QSVLLK------GINDDP 251 + I++H P E + + LA+ +L Q L G+ND P Sbjct: 205 TCHLAISLHNPLPEERLAIMPVERAMPLADTVALLRHYDWSRQRRLTFEYIVFSGLNDTP 264 Query: 252 EILANLMRTFVEL 264 LA L R +L Sbjct: 265 RHLAALKRLLSQL 277 >gi|293376256|ref|ZP_06622499.1| MiaB-like protein [Turicibacter sanguinis PC909] gi|325845151|ref|ZP_08168460.1| tRNA methylthiotransferase YqeV [Turicibacter sp. HGF1] gi|292645148|gb|EFF63215.1| MiaB-like protein [Turicibacter sanguinis PC909] gi|325488816|gb|EGC91216.1| tRNA methylthiotransferase YqeV [Turicibacter sp. HGF1] Length = 434 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 14/124 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQI----WEVI 148 R LK+ C +C +C G+ + + + ++ Sbjct: 142 RTRATLKIQDGCNNFCTYCIIPWARGTVRSQKP-EIVIDQVKQLVANGHCEVVLTGIHTA 200 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 G D L K+L+ L I ++ +R S ++ + ++I +K + K + Sbjct: 201 AYGED---LEDYSFGKLLQDLIKIDGLKRIRISS----IEASEMTDDVITAMKMSDK-IV 252 Query: 209 IAIH 212 +H Sbjct: 253 NHLH 256 >gi|189485173|ref|YP_001956114.1| hypothetical protein TGRD_170 [uncultured Termite group 1 bacterium phylotype Rs-D17] gi|238055294|sp|B1GZH1|RIMO_UNCTG RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|170287132|dbj|BAG13653.1| conserved hypothetical protein [uncultured Termite group 1 bacterium phylotype Rs-D17] Length = 439 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 36/149 (24%), Positives = 56/149 (37%), Gaps = 21/149 (14%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGDP 154 LK+ C C FC + G + + E+ + + ++ I E+I D Sbjct: 147 AYLKIAEGCGHVCSFCIIPALRGRYESRTM-----ESLVDEVAALAESGIKELILIAQDT 201 Query: 155 L-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-Y 208 I L K+L L I ++ +R P I LI+ KE K Y Sbjct: 202 TGYGKDIYGAFVLDKLLVKLSKINGLKWIRL----LYAYPSSITDGLIEVFKEHKKICSY 257 Query: 209 IAIHANHPYEFSEEAIAAISR-LANAGII 236 + I H S+ ++A+ R L GII Sbjct: 258 MDIPIQHA---SKNVLSAMKRPLNTPGII 283 >gi|167757163|ref|ZP_02429290.1| hypothetical protein CLORAM_02713 [Clostridium ramosum DSM 1402] gi|167703338|gb|EDS17917.1| hypothetical protein CLORAM_02713 [Clostridium ramosum DSM 1402] Length = 220 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 7/76 (9%) Query: 97 ILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 H C + C +C R + +LS+++ L Y++ + V TGG+PL Sbjct: 24 AAFIRFHYCNLNCSYCDTRYANDSNSNYELLSAQNI---LDYLKANKVVN-VTLTGGEPL 79 Query: 156 ILSHKRLQKVLKTLRY 171 + + + ++ L Sbjct: 80 LQQN--IDYLIDLLLK 93 >gi|24375413|ref|NP_719456.1| biotin synthase [Shewanella oneidensis MR-1] gi|24350251|gb|AAN56900.1|AE015824_11 biotin synthase family protein [Shewanella oneidensis MR-1] gi|301344403|gb|ADK73962.1| HydE [Shewanella oneidensis] Length = 359 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 16/82 (19%), Positives = 35/82 (42%), Gaps = 1/82 (1%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R +++ + C +C +C R LS+++ A+ I E V+ +G D Sbjct: 62 RGIVEFSNHCRNHCHYCGLRTENRQVTRYRLSNEEILNAVDSIAELGLGTVVLQSGDD-F 120 Query: 156 ILSHKRLQKVLKTLRYIKHVQI 177 S R+ ++ ++ ++ I Sbjct: 121 NYSGNRISTLITEIKRHHNLAI 142 >gi|17987302|ref|NP_539936.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv. 1 str. 16M] gi|225852463|ref|YP_002732696.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis ATCC 23457] gi|256044623|ref|ZP_05447527.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv. 1 str. Rev.1] gi|256113501|ref|ZP_05454335.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv. 3 str. Ether] gi|256264042|ref|ZP_05466574.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv. 2 str. 63/9] gi|260563974|ref|ZP_05834460.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv. 1 str. 16M] gi|265991048|ref|ZP_06103605.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv. 1 str. Rev.1] gi|265994883|ref|ZP_06107440.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv. 3 str. Ether] gi|24211991|sp|Q8YGY6|MOAA_BRUME RecName: Full=Molybdenum cofactor biosynthesis protein A gi|254811537|sp|C0RIT4|MOAA_BRUMB RecName: Full=Molybdenum cofactor biosynthesis protein A gi|17982982|gb|AAL52200.1| molybdenum cofactor biosynthesis protein a [Brucella melitensis bv. 1 str. 16M] gi|225640828|gb|ACO00742.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis ATCC 23457] gi|260153990|gb|EEW89082.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv. 1 str. 16M] gi|262765996|gb|EEZ11785.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv. 3 str. Ether] gi|263001832|gb|EEZ14407.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv. 1 str. Rev.1] gi|263094229|gb|EEZ18106.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis bv. 2 str. 63/9] Length = 344 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K + ++ L + + + S++ R EL C + + +++ Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137 Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249 +P +F I AGI + +V LK ND Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182 >gi|326329949|ref|ZP_08196263.1| molybdenum cofactor biosynthesis protein A [Nocardioidaceae bacterium Broad-1] gi|325952157|gb|EGD44183.1| molybdenum cofactor biosynthesis protein A [Nocardioidaceae bacterium Broad-1] Length = 339 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 41/194 (21%), Positives = 71/194 (36%), Gaps = 42/194 (21%) Query: 83 HSPLKGIVHRYPDR-------ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDT 131 SP + R DR + + L C + C +C + G + VL+ + Sbjct: 3 TSPTDQVQQRLVDRFGRVATDLRVSLTDRCNLRCTYCMPPEGLDWLPGDE---VLTDDEV 59 Query: 132 EAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 + + + EV FTGG+PL+ + L ++ R + L + Sbjct: 60 VRLIGVATGQLGVREVRFTGGEPLV--RRGLVSIVARTREVAPDAELSITTNAL------ 111 Query: 192 INPELIQC---LKEAGK-PVYIAIHANHPYEFSEEAIAAISRLANAGI-----------I 236 L + L EAG V +++ + P F+E RL + Sbjct: 112 ---GLARMAGSLAEAGLDRVNVSLDSIRPDTFAEITRR--DRLHDVVAGLEAAAEAGLGP 166 Query: 237 LLSQSVLLKGINDD 250 + +VLL+G+NDD Sbjct: 167 IKINAVLLRGVNDD 180 >gi|254693681|ref|ZP_05155509.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 3 str. Tulya] gi|261213948|ref|ZP_05928229.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 3 str. Tulya] gi|260915555|gb|EEX82416.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 3 str. Tulya] Length = 344 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K + ++ L + + + S++ R EL C + + +++ Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137 Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249 +P +F I AGI + +V LK ND Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182 >gi|288940181|ref|YP_003442421.1| MiaB-like tRNA modifying enzyme [Allochromatium vinosum DSM 180] gi|288895553|gb|ADC61389.1| MiaB-like tRNA modifying enzyme [Allochromatium vinosum DSM 180] Length = 469 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 25/123 (20%), Positives = 40/123 (32%), Gaps = 18/123 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R +K+ C C FC + G ++ L ++ E + S I EV+ TG Sbjct: 161 RQRAFVKIQDGCRYQCTFCVTTQARGPERSRPLPEIVREVERF-----QDSGIREVVLTG 215 Query: 152 -------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 D L L +++ L + LR S P P+R Sbjct: 216 VHLGGYGAD---LGTD-LTHLIERLLNETAIPRLRLGSLEPWDLPERFWSLFADRRLMPH 271 Query: 205 KPV 207 + Sbjct: 272 LHL 274 >gi|228914502|ref|ZP_04078111.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] gi|228844821|gb|EEM89863.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar pulsiensis BGSC 4CC1] Length = 383 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 70 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 121 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H + + AI L I + +V+ D E +A L+ Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 181 Query: 261 F 261 Sbjct: 182 L 182 >gi|225627438|ref|ZP_03785475.1| molybdenum cofactor biosynthesis protein A [Brucella ceti str. Cudo] gi|254706840|ref|ZP_05168668.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis M163/99/10] gi|254710051|ref|ZP_05171862.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis B2/94] gi|256031546|ref|ZP_05445160.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis M292/94/1] gi|256159681|ref|ZP_05457434.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M490/95/1] gi|256254949|ref|ZP_05460485.1| molybdenum cofactor biosynthesis protein A [Brucella ceti B1/94] gi|260168678|ref|ZP_05755489.1| molybdenum cofactor biosynthesis protein A [Brucella sp. F5/99] gi|261222132|ref|ZP_05936413.1| molybdenum cofactor biosynthesis protein A [Brucella ceti B1/94] gi|261314305|ref|ZP_05953502.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis M163/99/10] gi|261317598|ref|ZP_05956795.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis B2/94] gi|261758152|ref|ZP_06001861.1| molybdenum cofactor biosynthesis protein A [Brucella sp. F5/99] gi|265988632|ref|ZP_06101189.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis M292/94/1] gi|265998097|ref|ZP_06110654.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M490/95/1] gi|225617443|gb|EEH14488.1| molybdenum cofactor biosynthesis protein A [Brucella ceti str. Cudo] gi|260920716|gb|EEX87369.1| molybdenum cofactor biosynthesis protein A [Brucella ceti B1/94] gi|261296821|gb|EEY00318.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis B2/94] gi|261303331|gb|EEY06828.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis M163/99/10] gi|261738136|gb|EEY26132.1| molybdenum cofactor biosynthesis protein A [Brucella sp. F5/99] gi|262552565|gb|EEZ08555.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M490/95/1] gi|264660829|gb|EEZ31090.1| molybdenum cofactor biosynthesis protein A [Brucella pinnipedialis M292/94/1] Length = 344 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K + ++ L + + + S++ R EL C + + +++ Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137 Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249 +P +F I AGI + +V LK ND Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182 >gi|294673381|ref|YP_003573997.1| MiaB family RNA modification enzyme [Prevotella ruminicola 23] gi|294472539|gb|ADE81928.1| RNA modification enzyme, MiaB family [Prevotella ruminicola 23] Length = 462 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 7/120 (5%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C G + ++S +A A + +I GD Sbjct: 170 RTRYFLKVQDGCDYFCTYCTIPYARGFSRNPTIASLVAQAQEAAAEGGKEIVLTGVNIGD 229 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 + ++ ++K L ++ +Q R S ++P I+ ELI+ ++ H Sbjct: 230 FGKTTGEKFIDLVKALDGVEGIQRYRISS----LEPDLISDELIEYCAKSR---AFMPHF 282 >gi|254714051|ref|ZP_05175862.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M644/93/1] gi|254716892|ref|ZP_05178703.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M13/05/1] gi|261218696|ref|ZP_05932977.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M13/05/1] gi|261321806|ref|ZP_05961003.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M644/93/1] gi|260923785|gb|EEX90353.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M13/05/1] gi|261294496|gb|EEX97992.1| molybdenum cofactor biosynthesis protein A [Brucella ceti M644/93/1] Length = 344 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K + ++ L + + + S++ R EL C + + +++ Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137 Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249 +P +F I AGI + +V LK ND Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182 >gi|311233095|gb|ADP85949.1| Radical SAM domain protein [Desulfovibrio vulgaris RCH1] Length = 393 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 34/198 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156 ++ C + C+ C + G + + A A I + +IFTGGDP++ Sbjct: 51 WEVTRSCNLACKHCRAEAHMEPYPGEFST----DEAKALIDTFPDVGNPIIIFTGGDPMM 106 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKPVYIAIHAN 214 + L + LR ++ P I PE Q +K +G +I + Sbjct: 107 RGD------VYELIAYATDKGLRC-----VMSPNGTLITPEHAQRMKASGVQ-RCSISID 154 Query: 215 HPYEFSEEAI-----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 P S +A I L +AGI + + + D+ ++ + Sbjct: 155 GPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTR---DNLHSFKDIFKLCER 211 Query: 264 LRIKPYYLHHPDLAAGTS 281 + +++ + Sbjct: 212 IGAVAWHIFLLVPTGRAA 229 >gi|148264555|ref|YP_001231261.1| TatD family hydrolase [Geobacter uraniireducens Rf4] gi|146398055|gb|ABQ26688.1| hydrolase, TatD family [Geobacter uraniireducens Rf4] Length = 462 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 6/97 (6%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQEKSQIWE 146 I +R + + L + + C C FC + E + +L + + +A I E Sbjct: 269 IAYRIRNSLYLNITNRCSNRCSFCAKFEDFTVKGHYLLLDHEPDFSEVMAAIAAHKGYDE 328 Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 V+F G G+PL L +++V L+ +R ++ Sbjct: 329 VVFCGYGEPL-LRLDLIKEVAAALKKQGM--RIRINT 362 >gi|120603171|ref|YP_967571.1| radical SAM domain-containing protein [Desulfovibrio vulgaris DP4] gi|120563400|gb|ABM29144.1| Radical SAM domain protein [Desulfovibrio vulgaris DP4] Length = 405 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 34/198 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156 ++ C + C+ C + G + + A A I + +IFTGGDP++ Sbjct: 63 WEVTRSCNLACKHCRAEAHMEPYPGEFST----DEAKALIDTFPDVGNPIIIFTGGDPMM 118 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKPVYIAIHAN 214 + L + LR ++ P I PE Q +K +G +I + Sbjct: 119 RGD------VYELIAYATDKGLRC-----VMSPNGTLITPEHAQRMKASGVQ-RCSISID 166 Query: 215 HPYEFSEEAI-----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 P S +A I L +AGI + + + D+ ++ + Sbjct: 167 GPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTR---DNLHSFKDIFKLCER 223 Query: 264 LRIKPYYLHHPDLAAGTS 281 + +++ + Sbjct: 224 IGAVAWHIFLLVPTGRAA 241 >gi|46579268|ref|YP_010076.1| radical SAM domain-containing protein [Desulfovibrio vulgaris str. Hildenborough] gi|46448682|gb|AAS95335.1| radical SAM domain protein [Desulfovibrio vulgaris str. Hildenborough] Length = 367 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 34/198 (17%), Positives = 67/198 (33%), Gaps = 34/198 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156 ++ C + C+ C + G + + A A I + +IFTGGDP++ Sbjct: 25 WEVTRSCNLACKHCRAEAHMEPYPGEFST----DEAKALIDTFPDVGNPIIIFTGGDPMM 80 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKPVYIAIHAN 214 + L + LR ++ P I PE Q +K +G +I + Sbjct: 81 RGD------VYELIAYATDKGLRC-----VMSPNGTLITPEHAQRMKASGVQ-RCSISID 128 Query: 215 HPYEFSEEAI-----------AAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE 263 P S +A I L +AGI + + + D+ ++ + Sbjct: 129 GPDAASHDAFRGVPGAFEQSMRGIGYLRDAGIEFQINTTVTR---DNLHSFKDIFKLCER 185 Query: 264 LRIKPYYLHHPDLAAGTS 281 + +++ + Sbjct: 186 IGAVAWHIFLLVPTGRAA 203 >gi|23501841|ref|NP_697968.1| molybdenum cofactor biosynthesis protein A [Brucella suis 1330] gi|161618912|ref|YP_001592799.1| molybdenum cofactor biosynthesis protein A [Brucella canis ATCC 23365] gi|163843226|ref|YP_001627630.1| molybdenum cofactor biosynthesis protein A [Brucella suis ATCC 23445] gi|254701716|ref|ZP_05163544.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 5 str. 513] gi|254704258|ref|ZP_05166086.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 3 str. 686] gi|256369383|ref|YP_003106891.1| molybdenum cofactor biosynthesis protein A [Brucella microti CCM 4915] gi|261752267|ref|ZP_05995976.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 5 str. 513] gi|261754926|ref|ZP_05998635.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 3 str. 686] gi|38258159|sp|Q8G0X4|MOAA_BRUSU RecName: Full=Molybdenum cofactor biosynthesis protein A gi|189028683|sp|A9MAX5|MOAA_BRUC2 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|189028684|sp|B0CLT0|MOAA_BRUSI RecName: Full=Molybdenum cofactor biosynthesis protein A gi|23347777|gb|AAN29883.1| molybdenum cofactor biosynthesis protein A [Brucella suis 1330] gi|161335723|gb|ABX62028.1| Molybdenum cofactor biosynthesis protein A [Brucella canis ATCC 23365] gi|163673949|gb|ABY38060.1| molybdenum cofactor biosynthesis protein A [Brucella suis ATCC 23445] gi|255999543|gb|ACU47942.1| molybdenum cofactor biosynthesis protein A [Brucella microti CCM 4915] gi|261742020|gb|EEY29946.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 5 str. 513] gi|261744679|gb|EEY32605.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 3 str. 686] Length = 344 Score = 37.8 bits (87), Expect = 2.5, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K + ++ L + + + S++ R EL C + + +++ Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137 Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249 +P +F I AGI + +V LK ND Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182 >gi|237709718|ref|ZP_04540199.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 9_1_42FAA] gi|229456354|gb|EEO62075.1| involved moaA/nifB/pqqE family protein [Bacteroides sp. 9_1_42FAA] Length = 498 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 39/192 (20%), Positives = 73/192 (38%), Gaps = 39/192 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGDPLI 156 L + C +C++C + S T+ + I+E Q+ +V GG+ + Sbjct: 146 FMLTNQCVTHCKYC-----YADTSTQIKSPLTTQRMMELIKEASDLQVQQVNLIGGEIFL 200 Query: 157 LSHKRLQKVLKTL--RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP--VYIAIH 212 ++ +LK L R I +++P+ +L+Q ++E G V I++ Sbjct: 201 HKDWKI--ILKELVKRGIAPEF---ISTKMPV------TQKLLQDVQETGYQGIVQISLD 249 Query: 213 ANHPYEFSE----------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF- 261 A H + E + + L ++G+ SVL N +LA L+ Sbjct: 250 AIHSEILTASLGVNGNYAKEMLHGLQLLDDSGLNYQISSVLTNY-NCQLNVLAELLHELS 308 Query: 262 -----VELRIKP 268 + RI P Sbjct: 309 HLKHIRDWRIIP 320 >gi|254518526|ref|ZP_05130582.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA] gi|226912275|gb|EEH97476.1| radical SAM domain-containing protein [Clostridium sp. 7_2_43FAA] Length = 451 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 8/113 (7%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 ED D H + Y + L ++H C + C++CF E + V+S + + Sbjct: 75 YSEDKYEDIAHGSMD--DRDYIKAVCLNIIHGCNLRCKYCFADEGEYNGHKGVMSLETAK 132 Query: 133 AALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTLRYIKHV--QILRF 180 A+ Y+ ++S E+ GG+P + +++++K R + + +RF Sbjct: 133 KAIDYVVKRSGPRRNIEIDLFGGEP-TMIMDTVKEIIKYARENEKEWKKNIRF 184 >gi|169831334|ref|YP_001717316.1| hypothetical protein Daud_1173 [Candidatus Desulforudis audaxviator MP104C] gi|169638178|gb|ACA59684.1| protein of unknown function DUF512 [Candidatus Desulforudis audaxviator MP104C] Length = 451 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 37/92 (40%), Gaps = 15/92 (16%) Query: 192 INPELIQCLKEAGK-PVYIAIHANHP---YEFSEEAIA-----AISRLANAGIILLSQSV 242 ++ ++ + P+Y+++H +P A + L AGI + +Q V Sbjct: 126 VDERDLRRIAGQRLSPLYVSVHTTNPALRRRLMGHPRAGGIMGQLRLLKAAGIEVHTQVV 185 Query: 243 LLKGIND------DPEILANLMRTFVELRIKP 268 L G+ND + LA L + + + P Sbjct: 186 LCPGLNDGDELSRTVKDLATLWPSVQSVGVVP 217 >gi|170754837|ref|YP_001782699.1| radical SAM domain-containing protein [Clostridium botulinum B1 str. Okra] gi|169120049|gb|ACA43885.1| radical SAM domain protein [Clostridium botulinum B1 str. Okra] Length = 455 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 22/87 (25%), Positives = 45/87 (51%), Gaps = 6/87 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF E K ++S + + A+ ++ EKS EV GG+PL Sbjct: 99 LNIAHDCNLRCKYCFADEGEYKGKRELMSPEVGKKAIDFVIEKSGPRKNIEVDLFGGEPL 158 Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180 + ++++++ + + H + +RF Sbjct: 159 MA-FSTIKEIVEYAKEQEEKHNKTIRF 184 >gi|149174199|ref|ZP_01852827.1| molybdopterin cofactor synthesis protein A [Planctomyces maris DSM 8797] gi|148847179|gb|EDL61514.1| molybdopterin cofactor synthesis protein A [Planctomyces maris DSM 8797] Length = 333 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 18/95 (18%), Positives = 43/95 (45%), Gaps = 7/95 (7%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI 156 + + C + C +C E V + + S E + +I+ + ++ TGG+PL+ Sbjct: 20 ISVTDRCNIRCFYCMPSEDVQFVHRSKIMS--FEEIVRFIRLVVPLGVDKIRLTGGEPLV 77 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR 191 K + +++K + I ++ + + + PQ+ Sbjct: 78 --RKNIPELVKMIADIPGIKDIGITTNGIL-LPQQ 109 >gi|256545277|ref|ZP_05472642.1| thiazole biosynthesis protein ThiH [Anaerococcus vaginalis ATCC 51170] gi|256399104|gb|EEU12716.1| thiazole biosynthesis protein ThiH [Anaerococcus vaginalis ATCC 51170] Length = 474 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 21/102 (20%), Positives = 40/102 (39%), Gaps = 5/102 (4%) Query: 78 IGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTE 132 + + S K + + Y +RI+L + C C +C + LS + Sbjct: 66 LNEEIFSLAKKLKEKFYGNRIVLFAPLYLSNYCVNGCLYCPYHAKNKTIPRRKLSQDEIR 125 Query: 133 AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + +Q+ + TG DP+ + + +KT+ IKH Sbjct: 126 KEVIALQDLGHKRLALETGEDPVNNPIDYVLESIKTIYSIKH 167 >gi|255011267|ref|ZP_05283393.1| hypothetical protein Bfra3_19146 [Bacteroides fragilis 3_1_12] gi|313149079|ref|ZP_07811272.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] gi|313137846|gb|EFR55206.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12] Length = 439 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C + + E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTI-PFARGRSRNGTVASLVEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKSTGETFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEYVSTSR---SFM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|239946801|ref|ZP_04698554.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsia endosymbiont of Ixodes scapularis] gi|239921077|gb|EER21101.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Rickettsia endosymbiont of Ixodes scapularis] Length = 464 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%) Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + + L YP + + C +C FC V S++ E Sbjct: 151 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 203 Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178 + +V+ +G ++L + L +LK L I +++ L Sbjct: 204 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 257 Query: 179 RFHSRVPI 186 R+ + PI Sbjct: 258 RYTTSHPI 265 >gi|189462612|ref|ZP_03011397.1| hypothetical protein BACCOP_03304 [Bacteroides coprocola DSM 17136] gi|189430773|gb|EDU99757.1| hypothetical protein BACCOP_03304 [Bacteroides coprocola DSM 17136] Length = 438 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C + + E A E++ TG Sbjct: 148 RTRYFLKVQDGCDYFCSYCTI-PFARGRSRNGKIADLVEQARQ--VAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + + Sbjct: 205 IGDFGKTTGESFFDLVKALDAVEGIERYRISS----IEPNLLTDEIIEYVARSRR---FM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|196033604|ref|ZP_03101016.1| putative coenzyme PQQ synthesis protein [Bacillus cereus W] gi|218903027|ref|YP_002450861.1| putative coenzyme PQQ synthesis protein [Bacillus cereus AH820] gi|228926971|ref|ZP_04090037.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] gi|195994038|gb|EDX57994.1| putative coenzyme PQQ synthesis protein [Bacillus cereus W] gi|218538427|gb|ACK90825.1| putative coenzyme PQQ synthesis protein [Bacillus cereus AH820] gi|228832706|gb|EEM78277.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar pondicheriensis BGSC 4BA1] Length = 377 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 64 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 65 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKEAIQKAKEVGLARWAF 115 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H + + AI L I + +V+ D E +A L+ Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 175 Query: 261 F 261 Sbjct: 176 L 176 >gi|153810776|ref|ZP_01963444.1| hypothetical protein RUMOBE_01160 [Ruminococcus obeum ATCC 29174] gi|149833172|gb|EDM88254.1| hypothetical protein RUMOBE_01160 [Ruminococcus obeum ATCC 29174] Length = 445 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 16/114 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-------G 151 LK+ C +C +C + G K + + Y+ + + E+I G Sbjct: 148 LKIAEGCDKHCTYCIIPSLRG--KFRSVPEERLLKQAEYMASQ-GVRELILVAQETTVYG 204 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D + K L +LK L IK ++ +R V P+ I ELIQ +KE K Sbjct: 205 TD--LYGKKTLHILLKKLCQIKGIRWIR----VLYCYPEEIYDELIQVMKEEKK 252 >gi|269926079|ref|YP_003322702.1| RNA modification enzyme, MiaB family [Thermobaculum terrenum ATCC BAA-798] gi|269789739|gb|ACZ41880.1| RNA modification enzyme, MiaB family [Thermobaculum terrenum ATCC BAA-798] Length = 432 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 54/143 (37%), Gaps = 22/143 (15%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF------ 149 + ++ C +C FC G ++ + D + ++ + EV Sbjct: 136 TAFVPVIMGCNKFCTFCVVPYRRGRERSIPIP--DVVEEVRFL-ADRGVKEVTLLGQTIN 192 Query: 150 -TGGDPLILSHK-RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 G D L ++ L +L + + ++ +RF P+ + +++ + + K Sbjct: 193 HYGKD---LPNRPDLADLLYAVHEVPGIERIRF----LTSYPRTMTDKILHAVADLPK-- 243 Query: 208 YIAIHANHPYEF-SEEAIAAISR 229 + H N P++ + + A+ R Sbjct: 244 -VCEHINIPFQAGDNDVLRAMRR 265 >gi|255693887|ref|ZP_05417562.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565] gi|260620292|gb|EEX43163.1| 2-methylthioadenine synthetase [Bacteroides finegoldii DSM 17565] Length = 434 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 14/113 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + + + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISKPI--DEILDEVRYLVSQGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GVD--LYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRER 242 >gi|163782835|ref|ZP_02177831.1| hypothetical protein HG1285_15906 [Hydrogenivirga sp. 128-5-R1-1] gi|159881956|gb|EDP75464.1| hypothetical protein HG1285_15906 [Hydrogenivirga sp. 128-5-R1-1] Length = 454 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 6/76 (7%) Query: 95 DRILLKLLHVCPVYCRFCFRRE----MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 +++ + L + C ++C FC R MV E + YI + + E++F Sbjct: 266 NKLYVNLTNKCNLHCVFCQRERERNFMVKGYWVWTTRDPSVEEVIRYIGDPTGYEEIVFC 325 Query: 151 G-GDPLILSHKRLQKV 165 G G+P L L+++ Sbjct: 326 GYGEP-TLRFSALKEI 340 >gi|219852013|ref|YP_002466445.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c] gi|219546272|gb|ACL16722.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c] Length = 377 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 11/68 (16%), Positives = 26/68 (38%), Gaps = 4/68 (5%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 + P + + +C CR+C + + + + + + + I + F+G Sbjct: 23 KRPTYAYISITSLCNSRCRYCDSW---KNNGESEPDTDEWKKIIDEL-VNLGIVTLTFSG 78 Query: 152 GDPLILSH 159 G+P I Sbjct: 79 GEPFIRKD 86 >gi|148560684|ref|YP_001258926.1| molybdenum cofactor biosynthesis protein A [Brucella ovis ATCC 25840] gi|166217239|sp|A5VQC9|MOAA_BRUO2 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|148371941|gb|ABQ61920.1| molybdenum cofactor biosynthesis protein A [Brucella ovis ATCC 25840] Length = 344 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K + ++ L + + + S++ R EL C + + +++ Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137 Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249 +P +F I AGI + +V LK ND Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182 >gi|332140865|ref|YP_004426603.1| molybdenum cofactor biosynthesis protein A [Alteromonas macleodii str. 'Deep ecotype'] gi|327550887|gb|AEA97605.1| molybdenum cofactor biosynthesis protein A [Alteromonas macleodii str. 'Deep ecotype'] Length = 322 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 27/181 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C++C G +S + + L + +V TGG+P L Sbjct: 15 LSVTEACNFRCQYCLPDGYEGPSSDQFMSLNEIDTLLKAFAK-LGTSKVRLTGGEP-TLR 72 Query: 159 HKRLQ--KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANH 215 L + IK V + +R+ ++ + K+AG V ++I + Sbjct: 73 RDFLDILHLTSNTPGIKRVAMTTHGARM-----EKFAHQW----KDAGLHQVNVSIDSLD 123 Query: 216 PYEFSE--------EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 P +F+ + + +AG+ + SVLL +D L R L+ Sbjct: 124 PRQFAAITGQDKLKAVLRGLDSAIDAGLDVKVNSVLLNDFSDS-----RLHRFLAWLKDM 178 Query: 268 P 268 P Sbjct: 179 P 179 >gi|187779452|ref|ZP_02995925.1| hypothetical protein CLOSPO_03048 [Clostridium sporogenes ATCC 15579] gi|187773077|gb|EDU36879.1| hypothetical protein CLOSPO_03048 [Clostridium sporogenes ATCC 15579] Length = 292 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 20/118 (16%) Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I ++ FTGG+PLIL + K++ I ++ + + + + ++ LK+A Sbjct: 32 IDKIRFTGGEPLILKD--IDKLIYNTSKISSIKDIAMTTNA------TLLEDRVEDLKKA 83 Query: 204 GKPVYIAIHANHPYE-----FS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 G + I + E + + +I + + GI + +V++KGINDD Sbjct: 84 GLK-RVNISLDSLKEDRFKSITRGGDINKVFKSIEKSLSIGIRPIKINTVIMKGINDD 140 >gi|197116415|ref|YP_002136842.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] gi|197085775|gb|ACH37046.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] Length = 358 Score = 37.8 bits (87), Expect = 2.6, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 77/221 (34%), Gaps = 42/221 (19%) Query: 94 PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 P I + C + C C E+ S+ S+++ + L I + S+ V+ +GG Sbjct: 7 PKWIAWETTQRCNLKCVHCRCSSELTSSEGD--FSTEEGKKLLKEISDFSKP-VVVLSGG 63 Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAG-KPVYI 209 +PL+ L + +L R+ + + E+ + +K+A K V + Sbjct: 64 EPLMRPDIFELAEYGTSL-----------GLRMCMASNGSLVTDEVCEKMKKADIKMVSL 112 Query: 210 A-------IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 + +H N P F AA G L S K + +A+ + Sbjct: 113 SLDGSTAEVHDNFRQCPGSFEGVLRAA-ELFRKHGQKFLINSSFTK---RNQHDIASTFK 168 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 L +Y+ + G+ I++ L K Sbjct: 169 VAKSLGATAWYMFM----------IVPTGRGEDIMSELISK 199 >gi|298674451|ref|YP_003726201.1| radical SAM domain-containing protein [Methanohalobium evestigatum Z-7303] gi|298287439|gb|ADI73405.1| Radical SAM domain protein [Methanohalobium evestigatum Z-7303] Length = 405 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 36/162 (22%) Query: 92 RY-PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVI 148 +Y P+ + ++ C C C G + + + + AL + + Sbjct: 102 KYIPETVSFEITRECKCNCEHCVVS---GGEGDLDVDTIKRTIDEALD-----MGAFIIT 153 Query: 149 FTGGDPLILSHKRLQKVLKTL---RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 FT GDPL+ + + +++ + R I V I + + PE + LKE+G Sbjct: 154 FTEGDPLL--REEIFELIDYVDKDRAI--VNIFTPGTEL--------TPETAKRLKESGL 201 Query: 206 PVYIAIHANHPYEFSEEAIA----------AISRLANAGIIL 237 + + E + AI +AG+++ Sbjct: 202 HNLLISIYSTDSEKHDSVRRLDGAHEMALNAIKNAVDAGLLV 243 >gi|171186368|ref|YP_001795287.1| radical SAM domain-containing protein [Thermoproteus neutrophilus V24Sta] gi|170935580|gb|ACB40841.1| Radical SAM domain protein [Thermoproteus neutrophilus V24Sta] Length = 347 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 65/185 (35%), Gaps = 33/185 (17%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQI 144 G+V R + + ++ VC + C FC S+ + EA LA ++E + Sbjct: 22 GVVDRGTNVLEVRPTSVCALSCVFCSVNAGPASRARWAEYEVEVEALLAALEEVVRYKGV 81 Query: 145 WEV---IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 +V + GDP L ++++ + IK V ++ +R+ ++ ++ L Sbjct: 82 DDVEVHVDGMGDPGNYP--HLAELIEGAKSIKGVALVSMQTRL-----YMLDERKLEELA 134 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 +AG A RLA A D E + L+ Sbjct: 135 KAGLDRINV-------SIDALDRALAKRLAGAEWY-------------DVEKVLRLVEAA 174 Query: 262 VELRI 266 + I Sbjct: 175 LGAGI 179 >gi|220929087|ref|YP_002505996.1| radical SAM protein [Clostridium cellulolyticum H10] gi|219999415|gb|ACL76016.1| Radical SAM domain protein [Clostridium cellulolyticum H10] Length = 438 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 16/114 (14%), Positives = 46/114 (40%), Gaps = 8/114 (7%) Query: 57 ARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE 116 RQ I + ++ + +D + + + + P + ++ C + C C+ Sbjct: 69 FRQMISKVKDWDTAESLWKDSSDNKEIASIPALSA--PLDLSWEVTKRCNLNCHHCYNDS 126 Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR 170 + + + + + + + ++ ++ TGG+PL+ L+ ++ LR Sbjct: 127 HAINYEPNL---EQIHSVVNELSST-RLRNIVVTGGEPLMRED--LKTIIGWLR 174 >gi|308063147|gb|ADO05034.1| hypothetical protein HPSAT_01425 [Helicobacter pylori Sat464] Length = 418 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQITGLKRIRIGS 221 >gi|241068677|ref|XP_002408506.1| conserved hypothetical protein [Ixodes scapularis] gi|215492494|gb|EEC02135.1| conserved hypothetical protein [Ixodes scapularis] Length = 446 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%) Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + + L YP + + C +C FC V S++ E Sbjct: 133 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185 Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178 + +V+ +G ++L + L +LK L I +++ L Sbjct: 186 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 239 Query: 179 RFHSRVPI 186 R+ + PI Sbjct: 240 RYTTSHPI 247 >gi|206896314|ref|YP_002246510.1| radical SAM domain protein [Coprothermobacter proteolyticus DSM 5265] gi|206738931|gb|ACI18009.1| radical SAM domain protein [Coprothermobacter proteolyticus DSM 5265] Length = 348 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 29/77 (37%), Gaps = 1/77 (1%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R +++ + C C +C R ++ ++ I + V+ +G DP Sbjct: 53 RGIIEFSNYCSSNCLYCGIRAQNKHVHRYRMTPQEIVDRAQIISAQGIKTVVLQSGEDPF 112 Query: 156 ILSHKRLQKVLKTLRYI 172 + L ++ ++ + Sbjct: 113 YTK-ETLGDIISAIQSL 128 >gi|15678091|ref|NP_275205.1| molybdenum cofactor biosynthesis A (MoaA) related protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2621099|gb|AAB84569.1| molybdenum cofactor biosynthesis A (MoaA) related protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 250 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 6/87 (6%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 I+ L C CR+CF S + I++++ + V+ GG+P Sbjct: 37 IITVLTPTCNFRCRYCF----FKPSGCMNHSPDRIADLIQRIRDETGVERVLIAGGEP-T 91 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSR 183 L + L ++ + L HV I +R Sbjct: 92 LQ-EDLPELTEILAGDFHVTISPNGTR 117 >gi|15611340|ref|NP_222991.1| hypothetical protein jhp0270 [Helicobacter pylori J99] gi|11387381|sp|Q9ZMF0|Y285_HELPJ RecName: Full=Putative methylthiotransferase jhp_0270 gi|4154794|gb|AAD05851.1| putative [Helicobacter pylori J99] Length = 418 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRGSNIARLIKKLSQITGLKRIRIGS 221 >gi|284048720|ref|YP_003399059.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731] gi|283952941|gb|ADB47744.1| Radical SAM domain protein [Acidaminococcus fermentans DSM 20731] Length = 332 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 24/110 (21%), Positives = 43/110 (39%), Gaps = 10/110 (9%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVL-SSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + CP C FC +R + G ++ + + E L +++ E+ F GG Sbjct: 5 IFIPHAGCPHLCSFCNQRTISGEGDSSLAGARRQMENLLGWVRPDPA-NELAFYGGSFTA 63 Query: 157 LSHKRLQKVLKTLRYIKHVQI---LRFHSRVPIVDPQRINPELIQCLKEA 203 L R + +L + + LR +R P I PE++ L+ Sbjct: 64 LDPDRQEALLDLAETWRGQGLCGPLRLSTR-----PDAITPEILDRLRAH 108 >gi|224543515|ref|ZP_03684054.1| hypothetical protein CATMIT_02724 [Catenibacterium mitsuokai DSM 15897] gi|224523642|gb|EEF92747.1| hypothetical protein CATMIT_02724 [Catenibacterium mitsuokai DSM 15897] Length = 439 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 41/114 (35%), Gaps = 22/114 (19%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 EL L R + N+ SP Y ++ C C +CF +K Sbjct: 65 DVNELTFLESLRMRTLASNDDSP-----SYY----IICPTTGCNARCYYCF-------EK 108 Query: 123 GTVLSSKDTEAA---LAYIQEKSQIWEVIFT--GGDPLILSHKRLQKVLKTLRY 171 G V + + A YI + ++ GG+PL L K + +++ L Sbjct: 109 GAVQKRMNLDTARAVAEYIFQNHDPEHLVIQWFGGEPL-LEPKTISYIVEYLSS 161 >gi|303243581|ref|ZP_07329923.1| Radical SAM domain protein [Methanothermococcus okinawensis IH1] gi|302486142|gb|EFL49064.1| Radical SAM domain protein [Methanothermococcus okinawensis IH1] Length = 466 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 34/75 (45%), Gaps = 5/75 (6%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 ++ + + C + C+ C+ G L++++ + I S + + F+GG+PL+ Sbjct: 115 VVWDVTYACNLRCKHCY--ANAGKPLEDELNTEEALKTID-ILANSGVVAIAFSGGEPLM 171 Query: 157 LSHKRLQKVLKTLRY 171 L +++ + Sbjct: 172 RKD--LFELIDRAKD 184 >gi|295084184|emb|CBK65707.1| SSU ribosomal protein S12P methylthiotransferase [Bacteroides xylanisolvens XB1A] Length = 436 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 70/227 (30%), Gaps = 71/227 (31%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G D + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 + L+ I+D+ + LMR Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLQLMRRQ--------- 267 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316 ++ E+ +++ ++++ G+ + ++ PG Sbjct: 268 --------------VSKEDTYRLIEQFRKEVPGIHLRTTLMVGHPGE 300 >gi|300087902|ref|YP_003758424.1| molybdenum cofactor biosynthesis protein A [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527635|gb|ADJ26103.1| molybdenum cofactor biosynthesis protein A [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 329 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 13/84 (15%), Positives = 37/84 (44%), Gaps = 3/84 (3%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C + + +LS ++ ++ + + + + TGG+PL+ Sbjct: 23 ISVTDRCNLRCMYCSGASVDHLRHNDILSYEEIAQ-ISRVAAELGVNHIRLTGGEPLV-- 79 Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182 L +++ L I ++ + + Sbjct: 80 RPGLSNLIELLTAIPGIEDISLTT 103 >gi|269837050|ref|YP_003319278.1| RNA modification enzyme, MiaB family [Sphaerobacter thermophilus DSM 20745] gi|269786313|gb|ACZ38456.1| RNA modification enzyme, MiaB family [Sphaerobacter thermophilus DSM 20745] Length = 460 Score = 37.8 bits (87), Expect = 2.7, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 48/141 (34%), Gaps = 18/141 (12%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIW----EVIF 149 + +++ C C +C G ++ ++ + E + ++ V Sbjct: 159 TAFVPIIYGCNFVCSYCIVPYRRGRERSRPMAEVIAEVERLAE--RGVKEVTLLGQTVNA 216 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 G D L S L +L + I ++ +RF + P RI + K Sbjct: 217 YGHD-LPGSPD-LADLLTAVNEIPGIERIRFLTSHPKYMSDRIVQAVATLPKACE----- 269 Query: 210 AIHANHPYEF-SEEAIAAISR 229 H N P + +E + + R Sbjct: 270 --HINLPVQAGDDEVLRRMRR 288 >gi|313885881|ref|ZP_07819621.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Porphyromonas asaccharolytica PR426713P-I] gi|312924636|gb|EFR35405.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Porphyromonas asaccharolytica PR426713P-I] Length = 157 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 1/68 (1%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C +C C + GT L+ + + I + + +GGDP+ + L Sbjct: 25 GCSHHCPGCHNPDSHNPLVGTPLTEAYLQQIIDDINNNPLLDGITLSGGDPMFCPEELLT 84 Query: 164 KVLKTLRY 171 +LK L+ Sbjct: 85 -LLKRLKS 91 >gi|258648137|ref|ZP_05735606.1| translation initiation factor IF-1 [Prevotella tannerae ATCC 51259] gi|260852018|gb|EEX71887.1| translation initiation factor IF-1 [Prevotella tannerae ATCC 51259] Length = 72 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ +E G +I ISG + YI LPG KV++ +++ K G Sbjct: 22 FRVELENGHEIT----AHISGKMRMHYIKILPGDKVKVEMSPYDLSK---GRIVFR 70 >gi|150020569|ref|YP_001305923.1| MiaB-like tRNA modifying enzyme [Thermosipho melanesiensis BI429] gi|149793090|gb|ABR30538.1| MiaB-like tRNA modifying enzyme [Thermosipho melanesiensis BI429] Length = 429 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 20/128 (15%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R +K+ C C +C R +G + SK E ++ I E++ TG Sbjct: 136 RTRAFIKVQDGCTNVCSYCTIRY----ARGMRIRSKPIELVVSEILRMVNKDYKEIVITG 191 Query: 152 GDPLIL------SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L L L +LK + IK +R S ++P+ IN ELI+ + K Sbjct: 192 ---LNLGKYGKDKETSLLNLLKNVVKIKGDFRIRLSS----INPEDINDELIKFIVNEEK 244 Query: 206 PVYIAIHA 213 V +H Sbjct: 245 -VCNHLHV 251 >gi|91204926|ref|YP_537281.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii RML369-C] gi|122426084|sp|Q1RKC2|MIAB_RICBR RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|91068470|gb|ABE04192.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia bellii RML369-C] Length = 446 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 48/141 (34%), Gaps = 34/141 (24%) Query: 76 DPIGDNNHSPLKGIVHRYPDRI--LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + + L YP + + C +C FC V S++ E Sbjct: 133 DFVEEAKFDQLP--EQLYPQGASSFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 185 Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178 + +++ +G ++L S + L +++ L I +++ L Sbjct: 186 VYR------EALKIVSSGAKEIMLLGQNVNAYHGKTSDDKVFTLADLIRHLVKIPNLERL 239 Query: 179 RFHSRVPIVDPQRINPELIQC 199 R+ + PI + +LI Sbjct: 240 RYTTSHPID----MTDDLISL 256 >gi|265767377|ref|ZP_06095043.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] gi|263252682|gb|EEZ24194.1| conserved hypothetical protein [Bacteroides sp. 2_1_16] Length = 415 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 97 ILLKLLHVCPVYCRFCFR--REMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++L C + CR+C +++V ++ LS + L ++ + + F GG+ Sbjct: 130 VTMRLTGECSINCRYCQTVDKQIVWCRKQDNRLSYNEICRLLEQLKHTP-VTLINFVGGN 188 Query: 154 PLILSHKRLQKVLKTL 169 +LS+ L ++L L Sbjct: 189 --VLSYPFLDELLNEL 202 >gi|239993006|ref|ZP_04713530.1| molybdenum cofactor biosynthesis protein A [Alteromonas macleodii ATCC 27126] Length = 322 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 26/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C++C G ++ + + L + +V TGG+P L Sbjct: 15 LSVTEACNFRCQYCLPDGYEGPTSDQFMTLNEIDTLLKAFAK-LGTSKVRLTGGEP-TLR 72 Query: 159 HKRLQKVLKTLRY----IKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213 L + L I+ V + +R+ ++ + KEAG V ++I + Sbjct: 73 RDFLD--ILRLTSNTPGIERVAMTTHGARM-----EKFAHQW----KEAGLHQVNVSIDS 121 Query: 214 NHPYEFSE--------EAIAAISRLANAGIILLSQSVLLKGINDD 250 P +F+ + + +AG+ + SVLL +D Sbjct: 122 LDPRQFAAITGQDKLKAVLRGLDAAIDAGLDVKVNSVLLNDFSDS 166 >gi|95928217|ref|ZP_01310965.1| Radical SAM [Desulfuromonas acetoxidans DSM 684] gi|95135488|gb|EAT17139.1| Radical SAM [Desulfuromonas acetoxidans DSM 684] Length = 369 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 36/217 (16%), Positives = 69/217 (31%), Gaps = 40/217 (18%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTG 151 P I + C + C C S TE A I + ++ + ++ +G Sbjct: 10 PKWIAWETTRRCNLTCVHC----RCSSDMEAASGDFTTEEAFKMIDDICEVSKPVMVLSG 65 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIA 210 G+PL+ + + + LR + I E+ + +A K V ++ Sbjct: 66 GEPLMRPD------IFEIAEYGTSKGLRMC---MATNGTLITDEVCAKMNKADIKMVSLS 116 Query: 211 IHANHPYEFSEEAIA----------AISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 + + E ++ A L GI L S K + +AN + Sbjct: 117 LDGSTA-EIHDDFRQCPGAFEGVKRAAETLTRNGIKFLINSSFTK---RNQHDIANTFKL 172 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 L +Y+ + G++I+ L Sbjct: 173 AKSLGATAWYMFM----------IVPTGRGEEIMNEL 199 >gi|60683617|ref|YP_213761.1| hypothetical protein BF4196 [Bacteroides fragilis NCTC 9343] gi|60495051|emb|CAH09869.1| hypothetical protein BF4196 [Bacteroides fragilis NCTC 9343] Length = 416 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 37/76 (48%), Gaps = 6/76 (7%) Query: 97 ILLKLLHVCPVYCRFCFR--REMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + ++L C + CR+C +++V ++ LS + L ++ + + F GG+ Sbjct: 131 VTMRLTGECSINCRYCQTVDKQIVWCRKQDNRLSYNEICRLLEQLKHTP-VTLINFVGGN 189 Query: 154 PLILSHKRLQKVLKTL 169 +LS+ L ++L L Sbjct: 190 --VLSYPFLDELLNEL 203 >gi|327399314|ref|YP_004340183.1| 30S ribosomal protein S12 methylthiotransferase rimO [Hippea maritima DSM 10411] gi|327181943|gb|AEA34124.1| Ribosomal protein S12 methylthiotransferase rimO [Hippea maritima DSM 10411] Length = 429 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 17/126 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTGGD--- 153 LK+ C C FC S+ + + + + E+ T D Sbjct: 137 LKIADGCSNRCTFC-----AIPLIKGGFKSRGIDELVEEAEVLADKGVRELYITAQDTTA 191 Query: 154 PLILSHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV-YIA 210 + +++ L ++LK L I+ + +R P + ELI+ + A + V YI Sbjct: 192 YMFEKNRKNALVELLKKLDEIEGLSWVRL----MYTYPSYVTDELIEFMSTARRIVRYID 247 Query: 211 IHANHP 216 + H Sbjct: 248 MPFQHA 253 >gi|256028544|ref|ZP_05442378.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Fusobacterium sp. D11] gi|289766463|ref|ZP_06525841.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Fusobacterium sp. D11] gi|289718018|gb|EFD82030.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Fusobacterium sp. D11] Length = 112 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 3/84 (3%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDP 154 R+ L + C C+ CF E G + K+ + Y ++ I + GGDP Sbjct: 18 RVSLFVSG-CTHCCKNCFNEETWDENYGKKFTEKEENEIIEYFKKYGKTIKGLSLLGGDP 76 Query: 155 LILSH-KRLQKVLKTLRYIKHVQI 177 + K L K +K L+ I ++I Sbjct: 77 TYPKNIKPLLKFIKNLKRIYQIEI 100 >gi|157377532|ref|YP_001476132.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis HAW-EB3] gi|157319906|gb|ABV39004.1| molybdenum cofactor biosynthesis protein A [Shewanella sediminis HAW-EB3] Length = 326 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 26/160 (16%), Positives = 58/160 (36%), Gaps = 17/160 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + VC C +C + L+ + E +A E ++ TGG+P + Sbjct: 17 MSVTDVCNFKCTYCLPDGYRPDGRSKFLALSEIENLVAAFSE-VGTQKIRITGGEPTLRK 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY- 217 +++ + + +I + + R+ + + + +++ + P Sbjct: 76 D--FTDIIRAVA--DNDKIKTIAT---TTNGYRLEKHAKEWYDAGLRRINVSVDSLDPKM 128 Query: 218 --EFSE-----EAIAAISRLANAGI-ILLSQSVLLKGIND 249 + + E + I AG + +VLLKG ND Sbjct: 129 FYQITGENKFDEVMRGIDAALEAGFERVKINAVLLKGFND 168 >gi|94267016|ref|ZP_01290661.1| Radical SAM [delta proteobacterium MLMS-1] gi|93452290|gb|EAT02931.1| Radical SAM [delta proteobacterium MLMS-1] Length = 909 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 29/157 (18%) Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--S 142 P IVH DR+ L++ C CRFC ++ ++ ALA+I++ Sbjct: 250 PATRIVH---DRLGLEIARGCTRGCRFCQ-AGIIYRPVREREPARLLAEALAHIEQTGFD 305 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQC 199 ++ + + GD + ++ L +++ L K + +R + + E+++ Sbjct: 306 EVALLSLSSGDYACI-NELLGRLMDALAQRKVSVSLPSMRVGT---------LTAEMMEQ 355 Query: 200 LKEAGKPVYIAIHANHPYEFSEEA-IAAISRLANAGI 235 ++ K + + EA + R+ N GI Sbjct: 356 IRRVRKTGFT---------LAPEAGSERLRRVLNKGI 383 >gi|294338108|emb|CBJ93946.1| hypothetical phage protein (Radical SAM family) [Campylobacter phage CP220] Length = 306 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 42/137 (30%), Gaps = 16/137 (11%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDP 154 R + + C C +C S+ ++ ++ + GG+P Sbjct: 27 RAAIMTTNKCCFSCEYCCNSGFTDFNAAKNTKSEADLKCFNLVKAIFPRLKSAVLCGGEP 86 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+ L L + +K V IL + + LKE + + Sbjct: 87 LMC--DYLYNYLDLFKDLKDVTILT----NLLYIKDHY-----KRLKEYR-NLDLVTTY- 133 Query: 215 HPYEFSEEAIAAISRLA 231 H + + + I RL Sbjct: 134 HASQIN--SNQYIERLK 148 >gi|238018952|ref|ZP_04599378.1| hypothetical protein VEIDISOL_00812 [Veillonella dispar ATCC 17748] gi|237864436|gb|EEP65726.1| hypothetical protein VEIDISOL_00812 [Veillonella dispar ATCC 17748] Length = 472 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%) Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y DRI+L + C C +C K L+ + ++ VI Sbjct: 80 YGDRIVLFAPLYLSNYCINGCVYCPYHSKNRDIKRKKLTQNQIREEVIALEAMGHKRIVI 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYI 172 +G DPL L+ +L++++ I Sbjct: 140 ESGEDPLNNP---LEYILESIKTI 160 >gi|229007366|ref|ZP_04164964.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock1-4] gi|228753897|gb|EEM03337.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock1-4] Length = 364 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ ++ C + C C R E + L+ + + + I E +Q ++F+GGD Sbjct: 7 PFIVIWEVTRACELKCLHC-RAEAQYRRDPRELTFLEGKRLIDEIYEMNQPM-LVFSGGD 64 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI---- 209 PL+ + L + LR S P P + E IQ K G + Sbjct: 65 PLMRED------IYELANYAVQKGLRV-SMTPSATPN-VTKEAIQKAKGVGLARWAFSID 116 Query: 210 -AIHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 A H + + +AI ++ L I + + + K + E +A L+ Sbjct: 117 GATAETHDRFRGVAGSFQLTMDAIQYLNELQ---IPVQINTTISKYNVHEVEEMAALVEK 173 Query: 261 F 261 Sbjct: 174 L 174 >gi|212550430|ref|YP_002308747.1| translation initiation factor IF-1 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] gi|212548668|dbj|BAG83336.1| translation initiation factor IF-1 [Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2] Length = 72 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ +E G +I ISG + YI LPG KV++ +++ K G Sbjct: 22 FRVELENGHEIE----AHISGKMRMHYIKILPGDKVKVEMSPYDLSK---GRISFR 70 >gi|146282217|ref|YP_001172370.1| molybdenum cofactor biosynthesis protein A [Pseudomonas stutzeri A1501] gi|145570422|gb|ABP79528.1| molybdopterin biosynthetic protein A2 [Pseudomonas stutzeri A1501] Length = 331 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 39/167 (23%), Positives = 66/167 (39%), Gaps = 29/167 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C +C +MV + + +L+ ++ A + + TGG+PL+ Sbjct: 19 LSVTDRCDFRCTYCMSEDMVFAPRAQILTLEELYAVADAFIS-LGVKRIRVTGGEPLV-- 75 Query: 159 HKRLQKVLKTLRYIKHVQILRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 K L +L L ++ L S++P L L EAG + I + Sbjct: 76 RKGLTGLLARLGARNELEDLAITTNGSQLP---------SLAASLHEAGVR-RLNISLDS 125 Query: 216 PY-----EFS-----EEAIAAISRLANAGI--ILLSQSVLLKGINDD 250 E + ++ + I +AG I L+ SV+ KG NDD Sbjct: 126 LKRERFAELTRRDRLDQVLEGIEAARSAGFKRIKLN-SVVQKGRNDD 171 >gi|74311197|ref|YP_309616.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella sonnei Ss046] gi|82543105|ref|YP_407052.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella boydii Sb227] gi|123742024|sp|Q324N4|MIAB_SHIBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|123746029|sp|Q3Z4D1|MIAB_SHISS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|73854674|gb|AAZ87381.1| conserved hypothetical protein [Shigella sonnei Ss046] gi|81244516|gb|ABB65224.1| conserved hypothetical protein [Shigella boydii Sb227] gi|320174711|gb|EFW49843.1| tRNA-i(6)A37 methylthiotransferase [Shigella dysenteriae CDC 74-1112] gi|323163924|gb|EFZ49733.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella sonnei 53G] gi|332097757|gb|EGJ02731.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii 3594-74] Length = 474 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 29/158 (18%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154 + ++ C YC +C G + S D +A + + + EV G + Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAAQ-GVREVNLLGQNVN 204 Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLK- 201 S +L+ + I + +RF + P I++ R PEL+ L Sbjct: 205 AWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264 Query: 202 --EAGKPVYIA----IHANHPYEFSEEAIAAISRLANA 233 ++G + H + E A I +L A Sbjct: 265 PVQSGSDRILNLMGRTHT------ALEYKAIIRKLRAA 296 >gi|327438744|dbj|BAK15109.1| coproporphyrinogen III oxidase [Solibacillus silvestris StLB046] Length = 500 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 62/163 (38%), Gaps = 17/163 (10%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALA 136 I + + + + + + + CP C +C F + S + K + Sbjct: 156 IVERQLTVIPDLDELGKEISIYIGVPFCPTMCAYCTFPAYAIQSNRKAGRVEKFIDGLHI 215 Query: 137 YIQE--------KSQIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIV 187 ++E +I + + GG P + + + KT+ + + +R + V Sbjct: 216 ELREMGKWLTEKNMRITSIYWGGGTPTSIEAHEMDALYKTMFDAFPNPESIREIT-VEAG 274 Query: 188 DPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 P I PE I+ LK+ G + + P +++E + AI R Sbjct: 275 RPDTITPEKIEVLKKWGIDRISVN-----PQSYTQETLKAIGR 312 >gi|323135945|ref|ZP_08071028.1| molybdenum cofactor biosynthesis protein A [Methylocystis sp. ATCC 49242] gi|322399036|gb|EFY01555.1| molybdenum cofactor biosynthesis protein A [Methylocystis sp. ATCC 49242] Length = 346 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 33/172 (19%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + + C C +C M + +L+ ++ + + + + TGG+PL+ Sbjct: 28 VRVSVTDRCDFRCVYCMSEHMTFLPRRDLLTLEELDRLCSAFVARGTKR-LRITGGEPLV 86 Query: 157 ----------LSHKRLQKVLKTLRYIKHVQIL-RFHSRV-------PIVDPQRINPELIQ 198 LS L+ L + L RF S + V ++P + Sbjct: 87 RHDVMTLFRALSRHLASGALEELTLTTNGSQLARFASELVDCGVKRVNVSLDTLDPGRFR 146 Query: 199 CLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 L G +H +A + AG+ + +V LKG+N+D Sbjct: 147 ALTRTG---------DHAR-----VMAGVDAALAAGLRVKLNAVALKGVNED 184 >gi|291166122|gb|EFE28168.1| Fe-S oxidoreductase [Filifactor alocis ATCC 35896] Length = 424 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 45/115 (39%), Gaps = 15/115 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R +K+ C +C +C + + S+ E + +++ + EV+ TG Sbjct: 135 HTRAFVKIQDGCDRFCTYC-----IIPFTRGPVRSRSLENIVYEVKKLVNNGYKEVVLTG 189 Query: 152 GDPLIL----SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + L V++ L I ++ +R S V+P I + ++ + + Sbjct: 190 IHVASYGKDTKKETLIDVIERLSTIDGLERIRTSS----VEPIIITEDFLKRVSQ 240 >gi|260221009|emb|CBA29146.1| Molybdenum cofactor biosynthesis protein A [Curvibacter putative symbiont of Hydra magnipapillata] Length = 385 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F ++ +LS ++ + ++ TGG+ Sbjct: 51 ISVTDRCNFRCSYCMPKEVFHKDYPYLPHSALLSFEEITTLAKQFVA-LGVQKIRLTGGE 109 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K ++ +++ L I Sbjct: 110 PLL--RKNIETLIEQLAAI 126 >gi|269122177|ref|YP_003310354.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Sebaldella termitidis ATCC 33386] gi|268616055|gb|ACZ10423.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Sebaldella termitidis ATCC 33386] Length = 163 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 15/65 (23%), Positives = 24/65 (36%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C C C E G V+ SK + I + + +GGDP S + L Sbjct: 24 SGCSHACPGCHNEESWNPDNGEVMDSKYFKKITDEINGNKMLSGITISGGDPFYDSEEFL 83 Query: 163 QKVLK 167 +++ Sbjct: 84 DFLVR 88 >gi|256393258|ref|YP_003114822.1| GAF sensor hybrid histidine kinase [Catenulispora acidiphila DSM 44928] gi|256359484|gb|ACU72981.1| GAF sensor hybrid histidine kinase [Catenulispora acidiphila DSM 44928] Length = 1588 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 19/168 (11%) Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 DP + S L +TLR ++LR H+ + P EL+ L E + + + + Sbjct: 1385 ADPALHSIPILAHHNRTLRS-DQERLLRAHAEL---YP----LELLPSLDELRERIVLHL 1436 Query: 212 HANHPYEFSEEA---IAAISRLANAGIILLSQSVLLKGINDDPEILANL--MRTFVELRI 266 A HP + + L ++G +L +SVL+ I+DD L L M +R+ Sbjct: 1437 GAEHPDDVVPLPQPGRERPAELPDSGGLLAGRSVLV--IDDDARNLFALTGMLEMHGMRV 1494 Query: 267 KPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLP 314 + D G + ++ + ++ G I +P Sbjct: 1495 ----VDAEDGVKGIQALQNDPRIEVILMDVMMPEMDGYEATARIRTMP 1538 >gi|296125375|ref|YP_003632627.1| Radical SAM domain protein [Brachyspira murdochii DSM 12563] gi|296017191|gb|ADG70428.1| Radical SAM domain protein [Brachyspira murdochii DSM 12563] Length = 265 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 25/113 (22%), Positives = 53/113 (46%), Gaps = 20/113 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD----TEAALAYIQEKSQ--IWEVIFTGG 152 + + C + C +C ++G + S + E + ++E S+ I +V TGG Sbjct: 14 VSVTDRCNLRCVYCM------PEEGIIKKSHNEILTFEQIYSIVKEASELGIKKVRITGG 67 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 +PL+ K +++++ +R I+ V+I+ + ++ L + LK AG Sbjct: 68 EPLV--RKNIEELVSMIRSIEKVEIIAMTTNAVLLY------SLAEKLKNAGL 112 >gi|254432004|ref|ZP_05045707.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Cyanobium sp. PCC 7001] gi|197626457|gb|EDY39016.1| MiaB-like tRNA modifying enzyme YliG, TIGR01125 [Cyanobium sp. PCC 7001] Length = 467 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 30/156 (19%), Positives = 58/156 (37%), Gaps = 23/156 (14%) Query: 92 RYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 RY LK+ C C FC + G Q+ + + A + + V Sbjct: 144 RYRTTSEAVAYLKVAEGCDYRCAFCIIPRLRGDQRSRPI--ESIVAEARQLAAQGVKELV 201 Query: 148 IFT------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + + G D + RL ++L+ L ++ + +R H P PE++ + Sbjct: 202 LISQITTNYGLD--LYGKPRLAELLRALAEVE-IPWIRVHYAYPTGL----TPEVLAAYR 254 Query: 202 EAGKPV-YIAIHANHPYEFSEEAIAAISRLANAGII 236 E V Y+ + H + + + A++R A + Sbjct: 255 EVPNVVPYLDLPLQHSH---PDVLRAMNRPWQANVT 287 >gi|169824874|ref|YP_001692485.1| anaerobic ribonucleoside-triphosphate reductase activator [Finegoldia magna ATCC 29328] gi|302379664|ref|ZP_07268149.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Finegoldia magna ACS-171-V-Col3] gi|167831679|dbj|BAG08595.1| anaerobic ribonucleoside-triphosphate reductase activator [Finegoldia magna ATCC 29328] gi|302312571|gb|EFK94567.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Finegoldia magna ACS-171-V-Col3] Length = 166 Score = 37.8 bits (87), Expect = 2.8, Method: Composition-based stats. Identities = 15/76 (19%), Positives = 30/76 (39%), Gaps = 3/76 (3%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R + C + C+ CF +E G + T + Y+ + +I + GG+P Sbjct: 18 RCTFFVTG-CSLNCKNCFNKEYQDPNFGDKWTDTQTNQIIDYL-NQEEIDGLTILGGEPF 75 Query: 156 ILSHKRLQKVLKTLRY 171 L +++ +R Sbjct: 76 ESCDD-LIEIVGKIRE 90 >gi|320183045|gb|EFW57910.1| tRNA-i(6)A37 methylthiotransferase [Shigella flexneri CDC 796-83] Length = 474 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 29/158 (18%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154 + ++ C YC +C G + S D +A + + + EV G + Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAAQ-GVREVNLLGQNVN 204 Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLK- 201 S +L+ + I + +RF + P I++ R PEL+ L Sbjct: 205 AWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264 Query: 202 --EAGKPVYIA----IHANHPYEFSEEAIAAISRLANA 233 ++G + H + E A I +L A Sbjct: 265 PVQSGSDRILNLMGRTHT------ALEYKAIIRKLRAA 296 >gi|322419474|ref|YP_004198697.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M18] gi|320125861|gb|ADW13421.1| molybdenum cofactor biosynthesis protein A [Geobacter sp. M18] Length = 326 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 48/256 (18%), Positives = 93/256 (36%), Gaps = 63/256 (24%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C + V +LS ++ A + I ++ TGG+PL+ Sbjct: 16 LSVTDRCNLRCSYCMPEDGVEKLSHCEMLSYEELLRISAE-AVAAGIEKIRITGGEPLV- 73 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP 216 K + L L + ++ L + + E+ Q LK+AG + I++ Sbjct: 74 -RKGILDFLSRLAVLPGLKELVLTTNGL------LLKEMAQGLKDAGVQRLNISL----- 121 Query: 217 YEFSEEAIAAISR---LAN---------------AGIILLSQSVLLKGINDDPEILANLM 258 E A I+R L I + V+++G+NDD + + + Sbjct: 122 DSLKPETFAKITRGGDLQRVLDGIDEAERVGFPPHKINV----VVMRGVNDD--EMLDFV 175 Query: 259 RTFVELRIKPY------YLHHPDLAAGTSHFR---LTIEEGQK-------IVASLKEKIS 302 ++ +PY Y+ G + + + E ++ I + + S Sbjct: 176 ELTLK---RPYAVRFIEYM----PTCGDADWHDLCVPGAEIRERIARKYTIEETANTERS 228 Query: 303 GLCQPFYILDLPGGYG 318 G + F + PG G Sbjct: 229 GPSKNFRVQGAPGSLG 244 >gi|126178826|ref|YP_001046791.1| radical SAM domain-containing protein [Methanoculleus marisnigri JR1] gi|125861620|gb|ABN56809.1| Radical SAM domain protein [Methanoculleus marisnigri JR1] Length = 398 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 13/60 (21%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + + C + C C+ R G + L++++ A + + E ++ ++F+GG+PL+ Sbjct: 41 VFWNITNRCNLLCSHCYIRAGPGRGREDELTTEEGLALIDDLAEM-RVPLLLFSGGEPLV 99 >gi|187733108|ref|YP_001879330.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Shigella boydii CDC 3083-94] gi|229890659|sp|B2TU59|MIAB_SHIB3 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|187430100|gb|ACD09374.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Shigella boydii CDC 3083-94] Length = 474 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 29/158 (18%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154 + ++ C YC +C G + S D +A + + + EV G + Sbjct: 148 TAFVSIMEGCNKYCTYCVVPYTRGEEVSR--PSDDILFEIAQLAAQ-GVREVNLLGQNVN 204 Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVP------IVDPQRINPELIQCLK- 201 S +L+ + I + +RF + P I++ R PEL+ L Sbjct: 205 AWRGENYDGSTGSFADLLRLVAAIDGIDRIRFTTSHPIEFTDDIIEVYRDTPELVSFLHL 264 Query: 202 --EAGKPVYIA----IHANHPYEFSEEAIAAISRLANA 233 ++G + H + E A I +L A Sbjct: 265 PVQSGSDRILNLMGRTHT------ALEYKAIIRKLRAA 296 >gi|317490251|ref|ZP_07948739.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA] gi|325833449|ref|ZP_08165898.1| radical SAM domain protein [Eggerthella sp. HGA1] gi|316910745|gb|EFV32366.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA] gi|325485373|gb|EGC87842.1| radical SAM domain protein [Eggerthella sp. HGA1] Length = 415 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 36/185 (19%) Query: 96 RIL---LKLLHVCPVYCRFCF-----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEV 147 R+L L + C + C C+ R + D + A+ + + + ++ Sbjct: 75 RVLSAYLHVTQRCNLACAGCYSLDEHRNRL------ADAPLADMKRAVEGLAA-AGLSQL 127 Query: 148 IFTGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--- 203 I +GG+PL+ + + K I V +L + R+ E ++ L Sbjct: 128 IISGGEPLLREDLPDIVEHAKRACGIASVTVLSNGT--------RMTEEALERLAPNVDC 179 Query: 204 ------GKPVYIAIHANHPYEFSEEAIAAISRLANAGIIL-LSQSVLLKGINDDPEILAN 256 G + F E + A+ + AGI + +V K + DD Sbjct: 180 VSVSFDGCSAAAPAYIRSEQRFD-ELVEAVRMVQRAGIPAHIIPTVHAKNV-DDLASYVQ 237 Query: 257 LMRTF 261 L R Sbjct: 238 LSRDL 242 >gi|291515240|emb|CBK64450.1| SSU ribosomal protein S12P methylthiotransferase [Alistipes shahii WAL 8301] Length = 432 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 43/200 (21%), Positives = 71/200 (35%), Gaps = 39/200 (19%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVG------SQKGTVLSSKDTEAALAYIQEKSQIWE 146 LK+ C C +C R V ++ L+ + + I + + + Sbjct: 136 AYLKISEGCNWKCGYCAIPLIRGAHVSVPMEELEEEARKLAGQGVRELMV-IAQDTTYYG 194 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 + G + L ++L+ L I ++ +R H P P E+I+ + K Sbjct: 195 IDLYGR-------RMLAELLRRLCRIDGIEWIRLHYAYPAGFP----DEVIEAMASEPKI 243 Query: 207 V-YIAI---HAN-------HPYEFSEEAIAAISRLANAGIILLSQSVLLKG----INDDP 251 Y+ I H + H EA+ I RL A L ++ LL G D Sbjct: 244 CKYLDIPFQHISDAQLASMHRRHTKAEAMELIGRLRGAIPDLALRTTLLVGYPGETEADF 303 Query: 252 EILANLMR--TFVELRIKPY 269 E L +R F L + PY Sbjct: 304 EELLAFVREVRFERLGVFPY 323 >gi|289193018|ref|YP_003458959.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22] gi|288939468|gb|ADC70223.1| Radical SAM domain protein [Methanocaldococcus sp. FS406-22] Length = 467 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 46/109 (42%), Gaps = 14/109 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 ++ + + C + C+ C+ G L++++ + + I + + + F+GG+PL+ Sbjct: 115 VVWDVTYRCNLRCKHCY--ANAGKPLEDELNTEEAKKVVD-ILGNAGVVALAFSGGEPLM 171 Query: 157 LSHKRLQKVLKTLRYIKH-VQILRFHSRVPIVDPQRINPELIQCLKEAG 204 L +++ ++ V I + + E ++ LKE Sbjct: 172 RKD--LFELIDRVKDYDMQVSIATNGT--------LLTKENVRKLKEHN 210 >gi|228999813|ref|ZP_04159385.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock3-17] gi|228759755|gb|EEM08729.1| Coenzyme PQQ synthesis protein [Bacillus mycoides Rock3-17] Length = 364 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 37/181 (20%), Positives = 67/181 (37%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ ++ C + C C R E + L+ + + + I E +Q ++F+GGD Sbjct: 7 PFIVIWEVTRACELKCLHC-RAEAQYRRDPRELTFLEGKRLIDEIYEMNQPM-LVFSGGD 64 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI---- 209 PL+ + L + LR S P P + E IQ K G + Sbjct: 65 PLMRED------IYELANYAVQKGLRV-SMTPSATPN-VTKEAIQKAKGVGLARWAFSID 116 Query: 210 -AIHANHPY--------EFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 A H + + +AI ++ L I + + + K + E +A L+ Sbjct: 117 GATAETHDRFRGVAGSFQLTMDAIQYLNELQ---IPVQINTTISKYNVHEVEEMAALVEK 173 Query: 261 F 261 Sbjct: 174 L 174 >gi|76801423|ref|YP_326431.1| molybdopterin-based tungsten cofactor biosynthesis protein 1 [Natronomonas pharaonis DSM 2160] gi|76557288|emb|CAI48864.1| molybdopterin-based tungsten cofactor biosynthesis protein 1 [Natronomonas pharaonis DSM 2160] Length = 371 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 23/120 (19%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ ++ C + C C L++ + + L E V+ +GGD Sbjct: 19 PFVLIWEVTQACELACDHCRADAKPSRHPDE-LTTAEGKRLLDSAAEFGDGQLVVLSGGD 77 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSR-------VPIVDPQRINPELIQCLKEAGKP 206 P + L V+++R+ ++ P + + P+ I L +AG Sbjct: 78 P--MKRDDL------------VELVRYGTKQGLRMTLTPSGT-EALTPDNIAALVDAGLQ 122 >gi|300692273|ref|YP_003753268.1| molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum PSI07] gi|299079333|emb|CBM10239.1| Molybdenum cofactor biosynthesis protein A [Ralstonia solanacearum PSI07] Length = 341 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C +M + +LS +D + A A+I+ + ++ TGG+PL+ Sbjct: 22 LSVTDRCNLRCVYCMSEDMTFHARPDLLSMEDFDRIARAFIRR--GVRKLRITGGEPLVR 79 Query: 158 SH 159 Sbjct: 80 KD 81 >gi|296269899|ref|YP_003652531.1| membrane protein [Thermobispora bispora DSM 43833] gi|296092686|gb|ADG88638.1| Membrane protein involved in the export of O- antigen and teichoic acid-like protein [Thermobispora bispora DSM 43833] Length = 1197 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 24/57 (42%), Gaps = 2/57 (3%) Query: 176 QILRFHSRVPIVDP--QRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRL 230 ++ R +R+ V P R+ L+ L G +Y+ P E + + ++ L Sbjct: 474 RVTRLGTRMLAVMPHPDRVKRWLLPILSAQGLAIYLIALLAPPGELAGVDVERMNGL 530 >gi|281422230|ref|ZP_06253229.1| translation initiation factor IF-1 [Prevotella copri DSM 18205] gi|281403735|gb|EFB34415.1| translation initiation factor IF-1 [Prevotella copri DSM 18205] Length = 72 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ +E G I ISG + YI LPG KV++ +++ K G Sbjct: 22 FRVELENGVDIT----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70 >gi|167465181|ref|ZP_02330270.1| hypothetical protein Plarl_21911 [Paenibacillus larvae subsp. larvae BRL-230010] gi|322384550|ref|ZP_08058230.1| hypothetical protein PL1_1179 [Paenibacillus larvae subsp. larvae B-3650] gi|321150605|gb|EFX44082.1| hypothetical protein PL1_1179 [Paenibacillus larvae subsp. larvae B-3650] Length = 367 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 5/56 (8%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG 152 L +VC +C FC R +G + S + +++I E + E TGG Sbjct: 66 LYFTNVCEAHCAFCHFRRNLGEEGAYTYSP---DEMISHIHEHFHPGMREFHITGG 118 >gi|160903010|ref|YP_001568591.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95] gi|160360654|gb|ABX32268.1| Radical SAM domain protein [Petrotoga mobilis SJ95] Length = 474 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 5/70 (7%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQK----GTVLSSKDTEAALAYIQEKSQIWEVIF 149 P+ ++ + +C + C C+ + G G L++++ A+ I S + + Sbjct: 6 PETLIWDVTQLCNLSCIHCYNNDRYGKNNIYHSGKDLTTEEARNAIEKI-ANSGVKHIHL 64 Query: 150 TGGDPLILSH 159 GG+P Sbjct: 65 LGGEPFCRKD 74 >gi|197117742|ref|YP_002138169.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem] gi|197087102|gb|ACH38373.1| pyranopterin triphosphate synthase [Geobacter bemidjiensis Bem] Length = 326 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 30/168 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C + V + +LS ++ + I ++ TGG+PL+ Sbjct: 16 LSVTDRCNMRCSYCMPAQGVEKLEHKEMLSYEELYRVAGACIAQ-GIEKIRVTGGEPLV- 73 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216 K + L+ L + ++ L + E+ Q LK AG + I++ Sbjct: 74 -RKGIVPFLERLARVPGLKELVLTTNGLQ------LEEMAQPLKRAGVARLNISL----- 121 Query: 217 YEFSEEAIAAISR---LAN----------AG-IILLSQSVLLKGINDD 250 E A I+R L AG L V+++G+NDD Sbjct: 122 DSLRPEVFARITRGADLKRVLSGIEAAEKAGFANLKINMVVMRGVNDD 169 >gi|238794064|ref|ZP_04637681.1| Molybdenum cofactor biosynthesis protein A [Yersinia intermedia ATCC 29909] gi|238726569|gb|EEQ18106.1| Molybdenum cofactor biosynthesis protein A [Yersinia intermedia ATCC 29909] Length = 326 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 21/163 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + VC C +C + LS + ++ TGG+P + Sbjct: 17 LSITDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRVSRAFAL-LGTEKIRLTGGEPSMRR 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216 ++ T+R ++ L + R+ + Q +EAG I + + P Sbjct: 76 D--FSDIIATIRQNPAIRTL-----AVTTNGYRLARDAAQW-REAGLT-AINVSVDSLDP 126 Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250 +F + + I +AG + +VL++ +ND Sbjct: 127 RQFHAITGQDKFHQVMQGIDAAFDAGFEKVKINAVLMRDVNDR 169 >gi|317485155|ref|ZP_07944037.1| thiazole biosynthesis protein ThiH [Bilophila wadsworthia 3_1_6] gi|316923690|gb|EFV44894.1| thiazole biosynthesis protein ThiH [Bilophila wadsworthia 3_1_6] Length = 472 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 9/122 (7%) Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y +RI+ L L + C C +C L+ +D + +Q+ I Sbjct: 80 YGNRIVMFAPLYLSNYCINSCSYCPYHAKNKHIARKKLTQEDIVREVTALQDMGHKRLAI 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHS-RVPIVDPQRINPELIQCLKEAGKPV 207 +G DPL + + + ++T+ +KH R S R V+ E + LK+AG Sbjct: 140 ESGEDPLNNPIEYILESIRTIYSVKH----RNGSIRRVNVNIAATTVENYRKLKDAGIGT 195 Query: 208 YI 209 YI Sbjct: 196 YI 197 >gi|254561814|ref|YP_003068909.1| molybdenum biosynthetic protein A [Methylobacterium extorquens DM4] gi|254269092|emb|CAX25055.1| molybdenum biosynthetic protein A [Methylobacterium extorquens DM4] Length = 344 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 31/173 (17%), Positives = 60/173 (34%), Gaps = 39/173 (22%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C +M K +L+ ++ + + ++ TGG+PL+ Sbjct: 30 ISVTDRCDFRCAYCMSEDMQFLPKRDLLTLEELDRLCGVFI-DRGVRKLRITGGEPLVRR 88 Query: 159 HKRLQKVLKTLRYIKHVQILRF--------HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + + + L H++ S++ R PEL + L V + Sbjct: 89 D--IMHLFRRLSR--HLKSGTLDELTLTTNGSQL-----ARFAPELAE-LGVRRINVSLD 138 Query: 211 IHANHPYEFSEEAIAAISR-------------LANAGIILLSQSVLLKGINDD 250 + AI+R GI + +V LKG+N+D Sbjct: 139 T-------LDPDKFRAITRRGDLSVVLAGIEAARAEGIKVKINAVALKGVNED 184 >gi|288942386|ref|YP_003444626.1| MiaB family RNA modification enzyme [Allochromatium vinosum DSM 180] gi|288897758|gb|ADC63594.1| RNA modification enzyme, MiaB family [Allochromatium vinosum DSM 180] Length = 441 Score = 37.8 bits (87), Expect = 2.9, Method: Composition-based stats. Identities = 18/116 (15%), Positives = 45/116 (38%), Gaps = 18/116 (15%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD 153 + ++ C YC +C V S+ + +A + + ++ + E+ G + Sbjct: 148 TAFVSVMEGCSKYCTYC-----VVPYTRGEEISRPFDDVIAEVADLAEQGVREINLLGQN 202 Query: 154 -----PLIL--SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 L+ S L +++ + ++ + +RF + P+ +LI+ E Sbjct: 203 VNAYRGLMADGSTASLALLIRYVAAVEGIGRIRFTTSHPV----EFGDDLIETFAE 254 >gi|298479874|ref|ZP_06998074.1| 2-methylthioadenine synthetase [Bacteroides sp. D22] gi|298274264|gb|EFI15825.1| 2-methylthioadenine synthetase [Bacteroides sp. D22] Length = 439 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C G + ++S E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|295084759|emb|CBK66282.1| MiaB-like tRNA modifying enzyme [Bacteroides xylanisolvens XB1A] Length = 439 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C G + ++S E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|294809243|ref|ZP_06767959.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b] gi|294443637|gb|EFG12388.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b] Length = 418 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C G + ++S E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|293368846|ref|ZP_06615450.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f] gi|292636151|gb|EFF54639.1| MiaB-like protein [Bacteroides ovatus SD CMC 3f] Length = 439 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C G + ++S E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|291556614|emb|CBL33731.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Eubacterium siraeum V10Sc8a] Length = 457 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF + ++ + + A+ ++ + S EV F GG+PL Sbjct: 101 LHVSHDCNLRCKYCFAQTGDFGGDRMLMKPETGKKAMDFLIKHSANRENLEVDFFGGEPL 160 Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180 + + + +K R I+ H + RF Sbjct: 161 MA-WDTVVETVKYARSIEKQHGKNFRF 186 >gi|237720003|ref|ZP_04550484.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] gi|229450555|gb|EEO56346.1| conserved hypothetical protein [Bacteroides sp. 2_2_4] Length = 439 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C G + ++S E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|237714843|ref|ZP_04545324.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262406886|ref|ZP_06083435.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22] gi|294647146|ref|ZP_06724745.1| MiaB-like protein [Bacteroides ovatus SD CC 2a] gi|229445168|gb|EEO50959.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262355589|gb|EEZ04680.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22] gi|292637433|gb|EFF55852.1| MiaB-like protein [Bacteroides ovatus SD CC 2a] Length = 439 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 23/123 (18%), Positives = 46/123 (37%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C +C +C G + ++S E A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASM-VEQARQ--AAAEGGKEIVLTGVN 204 Query: 152 -GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD + + ++K L ++ ++ R S ++P + E+I+ + + Sbjct: 205 IGDFGKTTGESFFDLVKALDQVEGIERYRISS----IEPNLLTDEIIEFVSHSR---SFM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|225388623|ref|ZP_03758347.1| hypothetical protein CLOSTASPAR_02359 [Clostridium asparagiforme DSM 15981] gi|225045299|gb|EEG55545.1| hypothetical protein CLOSTASPAR_02359 [Clostridium asparagiforme DSM 15981] Length = 319 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 13/92 (14%) Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 RL+ + + V +L +R P P L+ L KPV++ + Sbjct: 105 YAPLPRLRSLFERAVSHPDVALLSVATR-PDCLPDE-TVSLLAGL-NRRKPVWVELGLQT 161 Query: 216 PYEFS----------EEAIAAISRLANAGIIL 237 +E + A RL AGI + Sbjct: 162 VHEDTARFIRRGYGFPVFEDACRRLKAAGITV 193 >gi|159127161|gb|EDP52276.1| pentafunctional AROM polypeptide, putative [Aspergillus fumigatus A1163] Length = 828 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 35/162 (21%), Positives = 64/162 (39%), Gaps = 41/162 (25%) Query: 113 FRREMVGSQKGTVLSSK--------DTEAALAYIQEKSQIWEVIFTGGDPLIL------- 157 F R + G G+ SS+ + L ++ E++ +G D + L Sbjct: 274 FIRRIYGLSHGSPFSSEVSPEVHTFALQVPLDWLDSYKDP-EILDSGADAITLLIDADVD 332 Query: 158 -SHK-RLQKVLKTLRYIKHVQILRFHSRVPIV-----DPQRINP--ELIQCLKEAGKPVY 208 + RL+ L H+ LR HSRVP+V P++I+ +++ L P Sbjct: 333 GKDQNRLKSQLAR-----HMATLRLHSRVPVVVDLGFSPRKIDTYRSVLEMLLRL-VPDA 386 Query: 209 IAIHANHPYEF------SEEAIAAISRLANA---GIILLSQS 241 + + P E ++ +I I+ + GI + SQ+ Sbjct: 387 VTCSLSCPDEIIQWLNTTKGSIKTIATWHQSTPLGIDV-SQT 427 >gi|167749297|ref|ZP_02421424.1| hypothetical protein EUBSIR_00248 [Eubacterium siraeum DSM 15702] gi|167657742|gb|EDS01872.1| hypothetical protein EUBSIR_00248 [Eubacterium siraeum DSM 15702] Length = 457 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF + ++ + + A+ ++ + S EV F GG+PL Sbjct: 101 LHVSHDCNLRCKYCFAQTGDFGGDRMLMKPETGKKAMDFLIKHSANRENLEVDFFGGEPL 160 Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180 + + + +K R I+ H + RF Sbjct: 161 MA-WDTVVETVKYARSIEKQHGKNFRF 186 >gi|160902962|ref|YP_001568543.1| radical SAM domain-containing protein [Petrotoga mobilis SJ95] gi|160360606|gb|ABX32220.1| Radical SAM domain protein [Petrotoga mobilis SJ95] Length = 422 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 5/64 (7%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY-IQEKSQIWEVIFTGGDPL 155 + + + C + C+ C L+ +D Y I +I V+ TGG+PL Sbjct: 100 VTFAITNSCNLNCKHCTASA--NEVFRGTLNLRDIYKIFDYFIAMNLKI--VVITGGEPL 155 Query: 156 ILSH 159 I Sbjct: 156 IRKD 159 >gi|114566851|ref|YP_754005.1| Fe-S oxidoreductase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337786|gb|ABI68634.1| Fe-S oxidoreductase [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 451 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 21/90 (23%), Positives = 35/90 (38%), Gaps = 18/90 (20%) Query: 195 ELIQCLKEAGKPVYIAIH----------ANHPYEFSEEAIAAISRLANAGIILLSQSVLL 244 + + L P+Y++IH N+P + + + RL A I + +Q VL Sbjct: 148 DWDKILSMRLSPLYVSIHCMQPELRARLFNNPR--AANIKSELKRLQEAVIEVHTQIVLC 205 Query: 245 KGIND------DPEILANLMRTFVELRIKP 268 GIND LA + + + P Sbjct: 206 PGINDAEVLQHSIYELAQFFPSVASVGVVP 235 >gi|330959524|gb|EGH59784.1| putative transcriptional regulator [Pseudomonas syringae pv. maculicola str. ES4326] Length = 380 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 8/81 (9%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE------KSQIWEVIFT 150 + LK + C V C FC+ E V S K ++ + E +L I++ ++ +++ Sbjct: 4 VYLKPTNYCNVGCDFCYLPEEVRSDK-NRMTPQTLEHSLQLIRDLAAREGHDRV-SILYH 61 Query: 151 GGDPLILSHKRLQKVLKTLRY 171 GG+PL L+ + L + +R Sbjct: 62 GGEPLTLAPEVLFEFSDAVRQ 82 >gi|328951851|ref|YP_004369185.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109] gi|328452175|gb|AEB08004.1| Radical SAM domain protein [Desulfobacca acetoxidans DSM 11109] Length = 337 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 6/77 (7%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + + C + C CF G ++ + L ++E +++V+FTGG+P Sbjct: 8 VHFIITNQCNLNCLHCFAD---SGVAGYEMTMDEIRKVLRELRE-LGVFQVLFTGGEPFC 63 Query: 157 LSHKRLQKVLKTLRYIK 173 + +V++ + Sbjct: 64 RND--FFEVMEDAEAMD 78 >gi|312962557|ref|ZP_07777047.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens WH6] gi|311283137|gb|EFQ61728.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens WH6] Length = 322 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C +C + +V +Q LS++ +AY+ E + I + TGG+PL+ Sbjct: 15 ISLTSACNYACTYCVPNGKRLVAAQDE--LSAEAMARGVAYLIEAAGIDRLRITGGEPLV 72 Query: 157 LSHKRLQKVLKTLRYI 172 +L+ + + + Sbjct: 73 SP--KLEAFMGAVGQM 86 >gi|297526282|ref|YP_003668306.1| Radical SAM domain protein [Staphylothermus hellenicus DSM 12710] gi|297255198|gb|ADI31407.1| Radical SAM domain protein [Staphylothermus hellenicus DSM 12710] Length = 450 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 49/131 (37%), Gaps = 22/131 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTGGDPL- 155 +++ CP C++C V G + + + + Y + I ++ F D L Sbjct: 175 IEISRGCPYGCKYC----QVSYMHGFFMRHRSIDNIVEYTGCMVEKNIRDIRFISPDSLA 230 Query: 156 -----ILSHKRL---QKVLKTLRYIKHVQIL--RF--HSRVPIVDPQRINPELIQCLKEA 203 + RL +++L L K+V+ R S V P+ + + + L++ Sbjct: 231 YGLKTMSREPRLDLIEELLSRLYK-KYVERKGARIFYGSFPSEVRPEHLTRDAARILRKY 289 Query: 204 --GKPVYIAIH 212 K + + Sbjct: 290 VANKNIILGAQ 300 >gi|317050296|ref|YP_004111412.1| molybdenum cofactor biosynthesis protein A [Desulfurispirillum indicum S5] gi|316945380|gb|ADU64856.1| molybdenum cofactor biosynthesis protein A [Desulfurispirillum indicum S5] Length = 325 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 33/165 (20%), Positives = 71/165 (43%), Gaps = 21/165 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + + C + C +C + + + K +L+ ++ L + + +V TGG+PL Sbjct: 16 VRISVTDRCNLKCFYCVPEDGICHATKDQLLTPEEIIRVLN-LLHGLGVSKVRITGGEPL 74 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHAN 214 + + + K+++ + I + + ++ P L+E G K V I++ + Sbjct: 75 --ARRGIGKLIRQISAIG-FSDIAMTTNG-VLLP-----RFAGLLRECGLKRVNISLDSL 125 Query: 215 HPYEFS--------EEAIAAISRLANAG-IILLSQSVLLKGINDD 250 HP F+ E+ I G + + +V ++GINDD Sbjct: 126 HPERFASITGVDSFEQVWKGIQAAQENGLVPIKINAVAIRGINDD 170 >gi|332983050|ref|YP_004464491.1| Radical SAM domain-containing protein [Mahella australiensis 50-1 BON] gi|332700728|gb|AEE97669.1| Radical SAM domain protein [Mahella australiensis 50-1 BON] Length = 289 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 17/80 (21%), Positives = 39/80 (48%), Gaps = 11/80 (13%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 +Y RIL ++ +C C FC ++ ++ +D + L ++ QI ++I TG Sbjct: 16 KY--RILWEITDMCNQRCPFC------HAKGTNNITIEDVKKILDNLKI-LQIKDIILTG 66 Query: 152 GDPLILSHKRLQKVLKTLRY 171 G+P + + +++ ++ Sbjct: 67 GEPFLRKD--IFEIMDMIQR 84 >gi|323702894|ref|ZP_08114552.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574] gi|323532152|gb|EGB22033.1| Radical SAM domain protein [Desulfotomaculum nigrificans DSM 574] Length = 358 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 26/134 (19%), Positives = 43/134 (32%), Gaps = 30/134 (22%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLILSHK 160 ++C CRFC + V+S + I E++ GG + Sbjct: 65 TNICYCKCRFCAFWREPDAPDAYVISQDELFTKIDETIAVGG--TELLIQGG---LHPEL 119 Query: 161 RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFS 220 L + LR IK + HS P PE+ +++G + Sbjct: 120 GLDYYVNLLRSIKKRYDIHIHSFSP--------PEIWHIARKSGVSI------------- 158 Query: 221 EEAIAAISRLANAG 234 A+ +L AG Sbjct: 159 ---REALQQLHQAG 169 >gi|253581157|ref|ZP_04858416.1| radical SAM domain-containing protein [Ruminococcus sp. 5_1_39B_FAA] gi|251847594|gb|EES75565.1| radical SAM domain-containing protein [Ruminococcus sp. 5_1_39BFAA] Length = 244 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 12/118 (10%) Query: 59 QFIPQKEE--LNILPEEREDPIGDNNHSPLKGIVHRYPDRI-----LLKLLHVCPVYCRF 111 Q +P K++ L ED + + +Y + + + C + C + Sbjct: 42 QIVPDKQKELLEKYFIYEEDEAVFAEKTVIPYRDSKYYTLQGTSLHIFVMTNACNMNCVY 101 Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI--FTGGDPLILSHKRLQKVLK 167 C ++ KG +S + E A+ I ++ + + F GG+PL + ++ +++ Sbjct: 102 CQAQDSEQLDKG-KMSMETAERAVD-IALQTPVRRMTFEFQGGEPLT-NFDVIKHIVQ 156 >gi|253698670|ref|YP_003019859.1| radical SAM protein [Geobacter sp. M21] gi|251773520|gb|ACT16101.1| Radical SAM domain protein [Geobacter sp. M21] Length = 358 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 42/221 (19%), Positives = 77/221 (34%), Gaps = 42/221 (19%) Query: 94 PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 P I + C + C C E+ S+ S+++ + L I + S+ V+ +GG Sbjct: 7 PKWIAWETTQRCNLKCVHCRCSSELTSSEGD--FSTEEGKKLLKEISDFSKP-VVVLSGG 63 Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAG-KPVYI 209 +PL+ L + +L R+ + + E+ + +K+A K V + Sbjct: 64 EPLMRPDIFELAEYGTSL-----------GLRMCMASNGSLVTDEVCEKMKKADIKMVSL 112 Query: 210 A-------IHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 + +H N P F AA G L S K + +AN + Sbjct: 113 SLDGSTAEVHDNFRQCPGSFEGVLRAA-ELFRKHGQKFLINSSFTK---RNQHDIANTFK 168 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 L +Y+ + G+ I++ L K Sbjct: 169 VAKSLGATAWYMFM----------IVPTGRGEDIMSELISK 199 >gi|294666547|ref|ZP_06731788.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292603691|gb|EFF47101.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 343 Score = 37.4 bits (86), Expect = 3.0, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 10/97 (10%) Query: 89 IVHRY--PDRIL-LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEK 141 + RY P R L L ++ C C +C + V G LS E + Sbjct: 14 MQDRYGRPLRDLRLSVIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS- 72 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + +V TGG+PL+ L ++ L I+ ++ L Sbjct: 73 VGVTKVRLTGGEPLLRRD--LPSLIARLTAIEGIEDL 107 >gi|319654152|ref|ZP_08008241.1| hypothetical protein HMPREF1013_04861 [Bacillus sp. 2_A_57_CT2] gi|317394086|gb|EFV74835.1| hypothetical protein HMPREF1013_04861 [Bacillus sp. 2_A_57_CT2] Length = 222 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 43/119 (36%), Gaps = 16/119 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +C + C C + + L + L + E S + + TGG+P +LS Sbjct: 34 FTTTVLCNMRCEHCAVGYTLQPRDPDALP---IDLMLKRLDEVSHLSSLSITGGEP-MLS 89 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHANH 215 K ++ + L H + +R +IN L L + P +H +H Sbjct: 90 KKSVKNYVAPLLRYAHERGVR----------TQINSNLTLELARYEEIIPYLDVLHISH 138 >gi|308182459|ref|YP_003926586.1| hypothetical protein HPPC_01445 [Helicobacter pylori PeCan4] gi|308064644|gb|ADO06536.1| hypothetical protein HPPC_01445 [Helicobacter pylori PeCan4] Length = 418 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRGSNIAQLIKKLSQITGLKRIRIGS 221 >gi|307718379|ref|YP_003873911.1| hypothetical protein STHERM_c06800 [Spirochaeta thermophila DSM 6192] gi|306532104|gb|ADN01638.1| hypothetical protein STHERM_c06800 [Spirochaeta thermophila DSM 6192] Length = 240 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + C + C +C E+V L ++ A L + + + V+FTGG+PL+ Sbjct: 24 VLFTGGCNLRCPYCHNPELVEGDPEDFLPWEEIRAFLT--RRRGILKGVVFTGGEPLL-- 79 Query: 159 HKRLQKVLKTLRYI 172 L +++ +R + Sbjct: 80 KGFLPSLIEEVRGM 93 >gi|297682136|ref|XP_002818786.1| PREDICTED: LOW QUALITY PROTEIN: condensin-2 complex subunit G2-like [Pongo abelii] Length = 1159 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 67/191 (35%), Gaps = 22/191 (11%) Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173 + V + + + Y+ + E + + K+L +LK L Sbjct: 747 KRKVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 800 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 ++ L + P P+ + L+ G ++IH H F E +S L + Sbjct: 801 DLESL-LQT--PGGKPRGFSEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSILEDT 853 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288 G L S+ +L I D E L R + +I YL G F++ ++ Sbjct: 854 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 910 Query: 289 EGQKIVASLKE 299 I+ ++K Sbjct: 911 RSLGIMQTVKG 921 >gi|260592743|ref|ZP_05858201.1| translation initiation factor IF-1 [Prevotella veroralis F0319] gi|288803955|ref|ZP_06409378.1| translation initiation factor IF-1 [Prevotella melaninogenica D18] gi|302345096|ref|YP_003813449.1| translation initiation factor IF-1 [Prevotella melaninogenica ATCC 25845] gi|303237492|ref|ZP_07324057.1| translation initiation factor IF-1 [Prevotella disiens FB035-09AN] gi|325269513|ref|ZP_08136129.1| translation initiation factor IF-1 [Prevotella multiformis DSM 16608] gi|325856032|ref|ZP_08171921.1| translation initiation factor IF-1 [Prevotella denticola CRIS 18C-A] gi|327313212|ref|YP_004328649.1| translation initiation factor IF-1 [Prevotella denticola F0289] gi|260535274|gb|EEX17891.1| translation initiation factor IF-1 [Prevotella veroralis F0319] gi|288333588|gb|EFC72040.1| translation initiation factor IF-1 [Prevotella melaninogenica D18] gi|302150166|gb|ADK96428.1| translation initiation factor IF-1 [Prevotella melaninogenica ATCC 25845] gi|302482312|gb|EFL45342.1| translation initiation factor IF-1 [Prevotella disiens FB035-09AN] gi|324988132|gb|EGC20099.1| translation initiation factor IF-1 [Prevotella multiformis DSM 16608] gi|325483704|gb|EGC86668.1| translation initiation factor IF-1 [Prevotella denticola CRIS 18C-A] gi|326945625|gb|AEA21510.1| translation initiation factor IF-1 [Prevotella denticola F0289] Length = 72 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ +E G I ISG + YI LPG KV++ +++ K G Sbjct: 22 FRVELENGVDIT----AHISGKMRMHYIKILPGDKVKVEMSPYDLTK---GRIVFR 70 >gi|188997347|ref|YP_001931598.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurihydrogenibium sp. YO3AOP1] gi|188932414|gb|ACD67044.1| oxygen-independent coproporphyrinogen III oxidase [Sulfurihydrogenibium sp. YO3AOP1] Length = 368 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 18/81 (22%), Positives = 35/81 (43%), Gaps = 7/81 (8%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAA----LAYIQEKSQIWEVIFTGGDPLILSHK 160 C + C +C V + L + EA L Y+ I + F GG P L + Sbjct: 12 CNIKCPYCDFTSFVWQED--KLKDRYVEALKKELLMYLDNDFDIQTIYFGGGTPSTLKPE 69 Query: 161 RLQKVLKTLR-YIKHVQILRF 180 ++ ++++ ++ +KH + L Sbjct: 70 KIAEIIEFIKNNVKHQKNLEI 90 >gi|167763123|ref|ZP_02435250.1| hypothetical protein BACSTE_01492 [Bacteroides stercoris ATCC 43183] gi|167699463|gb|EDS16042.1| hypothetical protein BACSTE_01492 [Bacteroides stercoris ATCC 43183] Length = 432 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 19/115 (16%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHVSRPMEEILDEVKYLVARGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + + L ++++ + I V+ +R H P P +L + ++E Sbjct: 196 GVD--LYKRQMLPQLIEKISEIPGVEWIRLHYAYPAHFPM----DLFRVMRERPN 244 >gi|149927643|ref|ZP_01915896.1| pyrroloquinoline quinone biosynthesis protein PqqE [Limnobacter sp. MED105] gi|149823697|gb|EDM82925.1| pyrroloquinoline quinone biosynthesis protein PqqE [Limnobacter sp. MED105] Length = 398 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 31/175 (17%), Positives = 66/175 (37%), Gaps = 22/175 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L +L + CP++C FC+ + LS+ + + + + + ++ F+GG+PL+ Sbjct: 17 LLAELTYRCPLHCVFCY-NPVDYKSNTNELSTAEWKETMKQARALGAV-QLGFSGGEPLL 74 Query: 157 LSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIH-- 212 + L L Y ++ + P R + LK AG + ++ Sbjct: 75 RDDLEELVAYGHELGYYTNLITSGIGLK-----PTR-----LDALKAAGLDHIQVSFQDA 124 Query: 213 ---ANHPYEFSEEAIAAIS---RLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 AN ++ + + AG ++ VL + D + + L Sbjct: 125 TQAANDALSDTKTFAKKLEIATAVKAAGWPMVLNVVLHRLNLDHIDSIIELAVKL 179 >gi|189426412|ref|YP_001953589.1| radical SAM protein [Geobacter lovleyi SZ] gi|189422671|gb|ACD97069.1| Radical SAM domain protein [Geobacter lovleyi SZ] Length = 1288 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 24/129 (18%), Positives = 53/129 (41%), Gaps = 9/129 (6%) Query: 77 PIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 PIG+ L DR++ + CP C FC+ + + ++ + AL Sbjct: 1013 PIGEWYARHLPQAQWHIADRVINVHGGRGCPFSCNFCY-HHSKPRYRDIAVMMEEAQEAL 1071 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE 195 +++ D ++ + R +++++ + + +R I+ R++ Sbjct: 1072 QRFDAN-----MLYFSDDLVLATPNRARQLVEAIHRLDRPISFSVSTRFDIL--ARMDDS 1124 Query: 196 LIQCLKEAG 204 L+Q LK+AG Sbjct: 1125 LLQELKQAG 1133 >gi|77460368|ref|YP_349875.1| molybdenum cofactor synthesis-like [Pseudomonas fluorescens Pf0-1] gi|77384371|gb|ABA75884.1| putative molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens Pf0-1] Length = 322 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C +C + +V +Q LS++ +AY+ E + I + TGG+PL+ Sbjct: 15 ISLTSACNYACTYCVPNGKRLVAAQDE--LSAEAMARGVAYLIEAAGIERLRITGGEPLV 72 Query: 157 LSHKRLQKVLKTLRYI 172 +L+ + + + Sbjct: 73 SP--KLESFMSAVGKM 86 >gi|22711909|ref|NP_683835.1| translation initiation factor 1 [Chaetosphaeridium globosum] gi|25008606|sp|Q8M9V4|IF1C_CHAGL RecName: Full=Translation initiation factor IF-1, chloroplastic gi|22416913|gb|AAM96513.1| translational initiation factor 1 [Chaetosphaeridium globosum] Length = 78 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 5/56 (8%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR++++ G + ISG + YI LPG KV++ +++ K G +Y + Sbjct: 22 FRVSLDNGC----QVLAHISGKIRRNYIRILPGDKVKVELSPYDLTK-GRITYRLR 72 >gi|268610302|ref|ZP_06144029.1| pyruvate formate-lyase activating enzyme [Ruminococcus flavefaciens FD-1] Length = 247 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 38/191 (19%), Positives = 67/191 (35%), Gaps = 22/191 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P + CP+ CR+C + KGT +++D +E + + TGG+ Sbjct: 17 PGVRFVVFFQGCPLRCRYCHNPDTWEFGKGTERTAEDLMKEYDSYKEFLKSGGITATGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL + L ++ L K V + + P+ + + + LK + H Sbjct: 77 PL-AQPEFLAELFS-LAKSKGVHTC-LDTSAGVYSPEH-HEAIDKALKYTDLVMLDIKHI 132 Query: 214 NHP---------YEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL------M 258 + E I L GI + + V++ GI D + L L + Sbjct: 133 DSAEHKKLTGMGNEHILAFAEHIRDL---GIPVWIRHVVVPGITDQHDELFALGEYLSTL 189 Query: 259 RTFVELRIKPY 269 L + PY Sbjct: 190 SNLKALDVLPY 200 >gi|126727641|ref|ZP_01743473.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium HTCC2150] gi|126703057|gb|EBA02158.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium HTCC2150] Length = 424 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 15/118 (12%) Query: 75 EDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVL--SS 128 ED + P R P L + C +C FC R V +L + Sbjct: 118 EDKFEELKDRPK---ARRAPS-AFLTVQEGCDKFCTFCVVPYTRGAEVSRPVDRILREAR 173 Query: 129 KDTEAALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 + E +A I Q + G D L ++++ + I+ ++ +RF + P Sbjct: 174 ELVERGVAEINLLGQNVNAYHGEGPDG----DWTLAQLIREMATIEGLERIRFTTSHP 227 >gi|326390905|ref|ZP_08212456.1| biotin and thiamin synthesis associated [Thermoanaerobacter ethanolicus JW 200] gi|325993053|gb|EGD51494.1| biotin and thiamin synthesis associated [Thermoanaerobacter ethanolicus JW 200] Length = 466 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 30/165 (18%) Query: 12 QDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPNDPIARQFIPQKEELNIL 70 QDL A + EI E + +TP A L+N + + E+ + Sbjct: 16 QDLEKAKKATSKDALEIIEKAKKLK-GITPEEAAVLLNVEDED---------LLNEMFKV 65 Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ I Y +RI+ L + + C CR+C R Q+ L Sbjct: 66 ARYIKEEI--------------YGNRIVIFAPLYVSNYCVNNCRYCGYRH-SNEQERKKL 110 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 + ++ + ++E + G DP+ + V+KT+ Sbjct: 111 TMEEVRREVEILEEMGHKRLAVEAGEDPVNCPIDYIIDVIKTIYD 155 >gi|300725257|ref|YP_003714586.1| putative Radical SAM [Xenorhabdus nematophila ATCC 19061] gi|297631803|emb|CBJ92524.1| putative Radical SAM [Xenorhabdus nematophila ATCC 19061] Length = 392 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 30/134 (22%), Positives = 55/134 (41%), Gaps = 22/134 (16%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGS---QKGTVLSSKDTEAALAYIQEKS-----QIWEVI 148 I+LK+ C + C +C+ M S V+S + A + + + ++ +V Sbjct: 14 IILKISERCNINCSYCYVFNMGNSLATDSPPVISLDNVLALRGFFERSAAENEIEVIQVD 73 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQR----INPELIQCLKEAG 204 F GG+PL++ R ++ LR + SR+ + Q I+ E I ++ Sbjct: 74 FHGGEPLMMKKDRFDQMCDILRQGDYS-----GSRLELAL-QTNGILIDDEWISLFEKHK 127 Query: 205 KPVYIAI----HAN 214 I+I H N Sbjct: 128 VHASISIDGPKHIN 141 >gi|297627043|ref|YP_003688806.1| Fe-S oxidoreductase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] gi|296922808|emb|CBL57386.1| Fe-S oxidoreductase [Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1] Length = 373 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 51/287 (17%), Positives = 94/287 (32%), Gaps = 47/287 (16%) Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 P G + P+ R P I +L C + CR C G + + + Sbjct: 1 MSHPAGIGSVKPVNWAYDRAPMIIYWELTTACGLACRHCRATAQPDPAPGELTTDEALGV 60 Query: 134 ALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR-FH-SRVPIVDPQR 191 + S VIFTGGDP+ L +++ R S P V P Sbjct: 61 LDEFAGFGSPAPHVIFTGGDPMRRGD--LDQLIAAANQ-------RGLGVSLAPAVTP-L 110 Query: 192 INPELIQCLKEAGKPVY-------IAIHANHPYEFSEEAIAAISRLAN---AGIILLSQS 241 ++ + ++ LK A H + + A + LA+ AG+ + + Sbjct: 111 LSAQRLKDLKALDVQAISLSLDGSTAAHHDGIRQVPGTFDATMQALADANAAGVPVQINT 170 Query: 242 VLLKGIND-DPEILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 + + D + L ++ + + L F +++ G + L+E Sbjct: 171 L----VTDETAKDLDDVYELLKNYDVMQWSLF----------FLISVGRG----SQLREL 212 Query: 301 ISGLCQPFYILDLPGGYGKV-KIDTHNIKKVGNGSYCITDHHNIVHD 346 G + I +GK+ + IK Y + ++H Sbjct: 213 TPGDAERTLIK-----WGKIGRTSPFRIKTTEAMQYRRINAQAMMHA 254 >gi|189346205|ref|YP_001942734.1| molybdenum cofactor biosynthesis protein A [Chlorobium limicola DSM 245] gi|189340352|gb|ACD89755.1| molybdenum cofactor biosynthesis protein A [Chlorobium limicola DSM 245] Length = 332 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 33/171 (19%), Positives = 68/171 (39%), Gaps = 34/171 (19%) Query: 99 LKLLHVCPVYCRFCFRREM-----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C + C +C E VG L + D A L I + ++ FTGG+ Sbjct: 20 IAVTSRCNLRCTYCMSEEHECHSSVGHPD--TLKTADV-ALLIRILAGLGVRKIRFTGGE 76 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 PL+ + + ++++T + ++ + + + + + L++AG + + Sbjct: 77 PLLRND--IAELVRTAKDTVGIETVSLTTNGV------LLHKHLDGLRKAGLD-ALNLSI 127 Query: 214 NHPYEFSEEAIAAISR--------------LANAGIILLSQSVLLKGINDD 250 + E AI+R LA+ I + V+++GIN D Sbjct: 128 DT---LDRERYRAITRRDVFEQVKANLDTLLASKTIPVKLNVVMMRGINSD 175 >gi|162450597|ref|YP_001612964.1| hypothetical protein sce2325 [Sorangium cellulosum 'So ce 56'] gi|161161179|emb|CAN92484.1| hypothetical protein sce2325 [Sorangium cellulosum 'So ce 56'] Length = 283 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 40/107 (37%), Gaps = 30/107 (28%) Query: 188 DPQRINPELIQCLKEAGKPVYI---------------AIHANHPYEFSEEAIAAISRLAN 232 P + E+++ L AG V++ H H +F+ + + Sbjct: 89 LPATVAEEVVKALANAGLDVWVYRGSDWFIRRRDAPHVTHEEHTVQFAPIVVD------D 142 Query: 233 AGIILLSQSVLLKGINDD----PEILANLMRTF----VELRIKPYYL 271 G +L + +V + G++DD L + F R +PYYL Sbjct: 143 LGGVLAN-AVKIVGVSDDLALVARCEGELRQRFGAQVSAARSQPYYL 188 >gi|330838436|ref|YP_004413016.1| RNA modification enzyme, MiaB family [Selenomonas sputigena ATCC 35185] gi|329746200|gb|AEB99556.1| RNA modification enzyme, MiaB family [Selenomonas sputigena ATCC 35185] Length = 432 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 17/120 (14%) Query: 72 EEREDPIG--DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 + D + + PL G R R LK+ C +C FC G + +L S Sbjct: 120 DGTGDIMHASEFEDIPLFGAPAR--TRAFLKIEEGCENFCSFCIIPYARGPVRSRLLKSV 177 Query: 130 DTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 EAA + E++ T G D L L ++ + + ++ LR S Sbjct: 178 RREAA-KLLAM--GFKEIVLTGIHLGCYGRD---LGDVTLADAVRAVLSLPGLKRLRLGS 231 >gi|319940618|ref|ZP_08014961.1| hypothetical protein HMPREF9464_00180 [Sutterella wadsworthensis 3_1_45B] gi|319805984|gb|EFW02742.1| hypothetical protein HMPREF9464_00180 [Sutterella wadsworthensis 3_1_45B] Length = 402 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 37/86 (43%), Gaps = 8/86 (9%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG--D 153 R L++L ++C CR+C R+ K ++ ++ A + + + G D Sbjct: 60 RGLIELSNICTANCRYCGIRKANHDVKRYTMTKEEIVEAAVWAADNGYGSVCLQAGERRD 119 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILR 179 K ++ + + LR I H++ R Sbjct: 120 -----EKFIEFICECLREI-HLRTKR 139 >gi|312880406|ref|ZP_07740206.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260] gi|310783697|gb|EFQ24095.1| Radical SAM domain protein [Aminomonas paucivorans DSM 12260] Length = 603 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 26/62 (41%), Gaps = 12/62 (19%) Query: 52 PNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111 P P+ RQ + +E +D + P IVH DR+ +++ C CRF Sbjct: 212 PRTPVRRQVLADLDE-----GFLQDRM----LVPSTAIVH---DRVAVQVFRGCTRGCRF 259 Query: 112 CF 113 C Sbjct: 260 CQ 261 >gi|307266298|ref|ZP_07547838.1| biotin and thiamin synthesis associated [Thermoanaerobacter wiegelii Rt8.B1] gi|306918676|gb|EFN48910.1| biotin and thiamin synthesis associated [Thermoanaerobacter wiegelii Rt8.B1] Length = 466 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 32/165 (19%), Positives = 59/165 (35%), Gaps = 30/165 (18%) Query: 12 QDLYNANLIKKEQIDEIKEISNHYSIALTPVIAN-LINPHNPNDPIARQFIPQKEELNIL 70 QDL A + EI E + +TP A L+N + + E+ + Sbjct: 16 QDLEKAKKATSKDALEIIEKAKKLK-GITPEEAAVLLNVEDED---------LLNEMFKV 65 Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ I Y +RI+ L + + C CR+C R Q+ L Sbjct: 66 ARYIKEEI--------------YGNRIVIFAPLYVSNYCVNNCRYCGYRH-SNEQERKKL 110 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 + ++ + ++E + G DP+ + V+KT+ Sbjct: 111 TMEEVRREVEILEEMGHKRLAVEAGEDPVNCPIDYIIDVIKTIYD 155 >gi|260566493|ref|ZP_05836963.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 4 str. 40] gi|260156011|gb|EEW91091.1| molybdenum cofactor biosynthesis protein A [Brucella suis bv. 4 str. 40] Length = 344 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLYSVFIE-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K + ++ L + + + S++ R EL C + + +++ Sbjct: 86 RKNIMHLIGNLSRHLKSGALDELTLTTNGSQL-----ARFAGELADC---GVRRINVSLD 137 Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249 +P +F I AGI + +V LK ND Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182 >gi|160940888|ref|ZP_02088228.1| hypothetical protein CLOBOL_05780 [Clostridium bolteae ATCC BAA-613] gi|158436132|gb|EDP13899.1| hypothetical protein CLOBOL_05780 [Clostridium bolteae ATCC BAA-613] Length = 453 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 46/123 (37%), Gaps = 22/123 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R +K+ C +C +C G + +D EA + + + EV+ TG Sbjct: 144 HTRAFIKVQDGCNQFCSYCIIPYARGRVRSR--KPEDVEAEVKGLVAR-GYREVVLTGIH 200 Query: 152 ----------GDPLILSH---KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 G P+ L +++ + ++ ++ +R S ++P+ I E + Sbjct: 201 LSSYGTEHMEGSPVKGGDWDSGPLWDLIERIHRVEGLERIRLGS----LEPRIITREFAE 256 Query: 199 CLK 201 L Sbjct: 257 KLA 259 >gi|145590531|ref|YP_001152533.1| radical SAM domain-containing protein [Pyrobaculum arsenaticum DSM 13514] gi|145282299|gb|ABP49881.1| Radical SAM domain protein [Pyrobaculum arsenaticum DSM 13514] Length = 301 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 29/187 (15%), Positives = 61/187 (32%), Gaps = 28/187 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLIL 157 L C C +C+ + + + +++ + V + DP Sbjct: 27 LNPYTGCGHRCLYCYITSYIPNAFSPRPKEDLIDKVRRDLEKIPRGAVVSLSNSSDPYTP 86 Query: 158 SHKRLQKVLKTLRYIKHVQ--ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 +L + + + + + + ++ P+V + L+ V + I Sbjct: 87 PEAQLG-LTRRVLQMLLERGYKVLIVTKSPLVL------RDLDVLQRHLGRVAVQITITT 139 Query: 216 PYE-----FSEEA------IAAISRLANAGIILLSQSVLLKGI----NDDPEILANLMRT 260 E A + A+ RL+ AGI + +V L I NDD E + ++ Sbjct: 140 LREDLAAVLEPGAPRPVGRLEAVRRLSEAGIPV---TVRLDPIIPLLNDDGENIEGVVSK 196 Query: 261 FVELRIK 267 E + Sbjct: 197 AAEAGAR 203 >gi|83311853|ref|YP_422117.1| Acetyl-CoA acetyltransferase [Magnetospirillum magneticum AMB-1] gi|82946694|dbj|BAE51558.1| Acetyl-CoA acetyltransferase [Magnetospirillum magneticum AMB-1] Length = 400 Score = 37.4 bits (86), Expect = 3.1, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 18/73 (24%) Query: 184 VPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAG--IILLSQS 241 P+ P R G PV + H HP E + EA+A + AG I + S Sbjct: 206 SPVTLPAR-----------KGDPV-VVSHDEHPRETTVEALAKLKAPFRAGGSITAGNAS 253 Query: 242 VLLKGINDDPEIL 254 G+ND L Sbjct: 254 ----GVNDGAAAL 262 >gi|332829284|gb|EGK01938.1| MiaB-like tRNA modifying enzyme [Dysgonomonas gadei ATCC BAA-286] Length = 436 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 27/145 (18%), Positives = 54/145 (37%), Gaps = 21/145 (14%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R LK+ C +C FC R +++ AA E++ Sbjct: 148 RTRYFLKVQDGCDYFCSFCTIPFARGRSRNGTIESMVKQAQEVAA-------KGGKEIVL 200 Query: 150 TG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TG GD + + ++K L + ++ R S ++P + E+I + ++ + Sbjct: 201 TGVNIGDFGRTTGETFFDLIKALDEVDGIERYRISS----IEPNLLTDEIIDFVSKSKR- 255 Query: 207 VYIAIHANHPYEFSEEAIAAISRLA 231 A H + P + +A+ + R Sbjct: 256 --FAPHFHIPLQSGSDAVLKLMRRR 278 >gi|289577818|ref|YP_003476445.1| biotin and thiamin synthesis associated [Thermoanaerobacter italicus Ab9] gi|297544104|ref|YP_003676406.1| biotin and thiamin synthesis associated [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289527531|gb|ADD01883.1| biotin and thiamin synthesis associated [Thermoanaerobacter italicus Ab9] gi|296841879|gb|ADH60395.1| biotin and thiamin synthesis associated [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 466 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y +RI+ L + + C CR+C R Q+ L+ ++ + ++E + Sbjct: 74 YGNRIVIFAPLYVSNYCVNNCRYCGYRH-SNEQQRKKLTMEEVRREVEILEEMGHKRLAV 132 Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171 G DP+ + V+KT+ Sbjct: 133 EAGEDPVNCPIDYIVDVIKTIYD 155 >gi|269792240|ref|YP_003317144.1| RNA modification enzyme, MiaB family [Thermanaerovibrio acidaminovorans DSM 6589] gi|269099875|gb|ACZ18862.1| RNA modification enzyme, MiaB family [Thermanaerovibrio acidaminovorans DSM 6589] Length = 439 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 42/110 (38%), Gaps = 15/110 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTG 151 R +K+ C C +C ++ G + L+ ++ + EV+ TG Sbjct: 142 HTRAFVKVQDGCSRGCTYCIVPKLRGPSISRPF-----QEVLSEVRSLVESGALEVVLTG 196 Query: 152 GDPLILSHKR-----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196 + L R L +++ L ++ + +RF S P QR+ L Sbjct: 197 ---VHLGDYRWDGLDLADLVRALSSVEGLGRIRFGSIEPFGLSQRLLEAL 243 >gi|226361740|ref|YP_002779518.1| ABC transporter substrate-binding protein [Rhodococcus opacus B4] gi|226240225|dbj|BAH50573.1| putative ABC transporter substrate-binding protein [Rhodococcus opacus B4] Length = 325 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 5/57 (8%) Query: 286 TIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHN 342 + + A L GL P ++D G G++ + + ++ +T Sbjct: 216 PDDGAADLFADL-----GLALPQNLVDQAGAGGRIPLSPERVNELNVDLLVMTGQEG 267 >gi|157364072|ref|YP_001470839.1| radical SAM domain-containing protein [Thermotoga lettingae TMO] gi|157314676|gb|ABV33775.1| Radical SAM domain protein [Thermotoga lettingae TMO] Length = 432 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 4/73 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + C + C CF + +L+ + + I + I V GG+PL Sbjct: 71 ILPTFNCNLQCIHCFYESKP-DENYQMLNKEYIPLIIDLINRYN-IENVTIGGGEPLT-- 126 Query: 159 HKRLQKVLKTLRY 171 L+ +L + Sbjct: 127 WPHLRNLLTEILE 139 >gi|119513285|ref|ZP_01632326.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Nodularia spumigena CCY9414] gi|119462073|gb|EAW43069.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Nodularia spumigena CCY9414] Length = 316 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 17/131 (12%) Query: 39 LTPVIANLINPHNPNDPIARQFIPQKEELNILPE-EREDPIGDNNHSPLKGIVHRYPDRI 97 L+P IA L+ + P + ++E + D + + S + R + + Sbjct: 30 LSPHIAELLQGNEPITEVR-----NEQEFVTMGFLHYGDEV-EQIISKFEN-ARRKKNIL 82 Query: 98 LL--KLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ----EKSQIWEVIFTG 151 C C +CF+ + Q G +S + A + YIQ E++++++ + G Sbjct: 83 NFTILPTLACNFSCDYCFQGDH---QHGQFMSPETQSATIRYIQSLIVEENRVFDCKWFG 139 Query: 152 GDPLILSHKRL 162 G+PL+ L Sbjct: 140 GEPLLAKETVL 150 >gi|70726083|ref|YP_252997.1| hypothetical protein SH1082 [Staphylococcus haemolyticus JCSC1435] gi|68446807|dbj|BAE04391.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435] Length = 381 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 22/135 (16%), Positives = 48/135 (35%), Gaps = 16/135 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 +C + C C + ++ L L I Q+ + TGG+P + S Sbjct: 36 FTTTTLCNMRCSHCAVGYTLQTKDPDALPMDIIYRRLDEI---PQLRTISITGGEP-MFS 91 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--- 215 K ++ ++K L + + + PQ ++ + + +H +H Sbjct: 92 KKSIKNIVKPLLKYAKDRGIYVQMNSNLTLPQDRYLDIAEYID--------VMHISHNWG 143 Query: 216 -PYEFSEEAIAAISR 229 EF++ A+ + Sbjct: 144 TIQEFTDVGFGAMKK 158 >gi|320010716|gb|ADW05566.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331] Length = 361 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 29/155 (18%), Positives = 57/155 (36%), Gaps = 33/155 (21%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-----QEKSQIWEVIFTG 151 +LL L CP+ C C T D + + ++ + + + V+ TG Sbjct: 17 LLLGLTRRCPLSCAHCS-----TGSSLTTREEPDADRLVRFVGSFTRENRPDV--VMLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILR-FHSRVPI---VDPQR---INPELIQCLKEAG 204 G+PL+L +++ L R SR + + R I P +++ ++ Sbjct: 70 GEPLLLP-----ALVEELSA-----RARAAGSRTALLSGMFFARSREIPPPVLRAIRGVD 119 Query: 205 K-PVYIAIHANHPYEF-SEEAIAAISRLANAGIIL 237 + H H E + A+ R+ G+ + Sbjct: 120 HFSASLDAH--HEREIPRADVFRAVHRIRETGVAV 152 >gi|168700072|ref|ZP_02732349.1| molybdenum cofactor biosynthesis protein A [Gemmata obscuriglobus UQM 2246] Length = 337 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 15/80 (18%), Positives = 37/80 (46%), Gaps = 3/80 (3%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C + + +L+ ++ A + + + +V TGG+PL+ Sbjct: 26 ISVTDRCNLRCTYCMPENVTFQDRSELLTFEEIVAFVR-VAVPLGVNKVRLTGGEPLM-- 82 Query: 159 HKRLQKVLKTLRYIKHVQIL 178 K L K+++ L + + + Sbjct: 83 RKELHKLVRLLTAVPGLTDI 102 >gi|168207240|ref|ZP_02633245.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens E str. JGS1987] gi|170661412|gb|EDT14095.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens E str. JGS1987] Length = 331 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%) Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C + +++ + + I +V TGG+PL+ Sbjct: 22 ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 79 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213 + + ++K + I ++ + + + + ++ L E G K V I++ Sbjct: 80 -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 132 Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + E + ++ + +I + + + +V+L+ N + + +L+ E I Sbjct: 133 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLACENPID- 189 Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320 F+ +T E +I+ K+ +S L P + + G GK+ Sbjct: 190 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEGFKGKI 247 >gi|18310772|ref|NP_562706.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens str. 13] gi|20141618|sp|Q9WX96|MOAA_CLOPE RecName: Full=Molybdenum cofactor biosynthesis protein A gi|18145453|dbj|BAB81496.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens str. 13] Length = 323 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 38/239 (15%), Positives = 90/239 (37%), Gaps = 30/239 (12%) Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C + +++ + + I +V TGG+PL+ Sbjct: 14 ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 71 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA--- 213 + + ++K + I ++ + + + + ++ L E G K V I++ Sbjct: 72 -REGIVDLIKNINKIPEIEEICLTTNGI------LLGDKVKELSENGLKRVNISLDTLKE 124 Query: 214 NHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + E + ++ + +I + + + +V+L+ N + + +L+ E I Sbjct: 125 DRFKEITRIGTLDKVLYSIEKCLENNVKVKINTVILEDFN--KDEILDLINLACENPID- 181 Query: 269 YYLHH-PDLAAGTSHFR-LTIEEGQKIVASLKEKISG-----LCQPFYILDLPGGYGKV 320 F+ +T E +I+ K+ +S L P + + G GK+ Sbjct: 182 -LRFIELMPIGEGKKFKGVTNSEILEIIKKEKKVLSDGKTLRLNGPAKYISIEGFKGKI 239 >gi|312879755|ref|ZP_07739555.1| MiaB-like tRNA modifying enzyme [Aminomonas paucivorans DSM 12260] gi|310783046|gb|EFQ23444.1| MiaB-like tRNA modifying enzyme [Aminomonas paucivorans DSM 12260] Length = 454 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 10/113 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C CR+C V + + E + EV+ TG Sbjct: 152 HTRAFVKVQDGCSHGCRYCIVPR-VRGRSVSRPPEDVLEEVRGLVGS--GCREVVLTGVH 208 Query: 154 -PLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 L + L +++K L ++ + LRF S ++P + L+ L E Sbjct: 209 LGLYGRDRGTDLGELVKRLARVEGLVRLRFGS----LEPFGLGESLLDVLGET 257 >gi|254292479|ref|YP_003058502.1| MiaB-like tRNA modifying enzyme [Hirschia baltica ATCC 49814] gi|254041010|gb|ACT57805.1| MiaB-like tRNA modifying enzyme [Hirschia baltica ATCC 49814] Length = 435 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 64/178 (35%), Gaps = 34/178 (19%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 + + + G+ R R +++ C C FC G+ + +V + + + Sbjct: 135 SVTETAGHLVDGLEGR--ARAFVQVQTGCDHRCTFCIIPYGRGNSR-SVPAGEVVDQVRQ 191 Query: 137 YIQEKSQIWEVIFTGGD----PLILSH-KRLQKVLKTLRYI-KHVQILRFHSRVPIVDPQ 190 + + +EV+ TG D L + L ++ + + ++ LR S + ++ Sbjct: 192 LVAKGH--YEVVLTGVDLTSWGADLPNAPNLGNLVARILKLAPDLKQLRL-SSIDAIE-- 246 Query: 191 RINPELIQCLKEAGKPVYIAIHAN---------------HPYEFSEEAIAAISRLANA 233 I+ +L + K + +H + H E +AI RL A Sbjct: 247 -IDDQLFDLIA-HDKRIAPHLHLSFQSGDNMILKRMKRRHSRE---DAINLCQRLRAA 299 >gi|240143426|ref|ZP_04742027.1| radical SAM domain protein [Roseburia intestinalis L1-82] gi|257204617|gb|EEV02902.1| radical SAM domain protein [Roseburia intestinalis L1-82] Length = 326 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 36/194 (18%) Query: 99 LKLLHVCPVYCRFCFRR-------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 + + C C +C R + + + E AL ++ +I TG Sbjct: 54 INIYRGCSHGCIYCDSRSRCYGFTHAFEDIEVKENAPELLEKALRSKRQ----KCMIGTG 109 Query: 152 G--DPLILSHKRLQKVLKT--LRYIKHVQI-LRFHSRVPIVDPQRI--NPELIQCLKEAG 204 DP + +RL +L L I + + ++ RI + +L+ + E Sbjct: 110 AMCDPYLHVEERL--LLTRRCLELIDRYEFGVAVQTKS-----ARILRDFDLLTSINEKA 162 Query: 205 KPVYIAIHANHPYEF----------SEEAIAAISRLANAGII-LLSQSVLLKGINDDPEI 253 K + + + ++E I + + AGI ++ + +L IND + Sbjct: 163 KAIVQITLTTYDEDLCKKIEPDVSTTKERIDVLMKCKEAGIPTVVWLTPILPFINDTADN 222 Query: 254 LANLMRTFVELRIK 267 + NL+ V+ +K Sbjct: 223 IKNLLDACVDAGVK 236 >gi|220905208|ref|YP_002480520.1| thiamine biosynthesis protein ThiH [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219869507|gb|ACL49842.1| Radical SAM domain protein [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 463 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 14/120 (11%) Query: 58 RQFIPQKEELNILPEEREDPI-GDNNHSPLKGIVHR-YPDRILL----KLLHVCPVYCRF 111 Q +P + + +DP+ + + + R Y DR++L L + C C + Sbjct: 38 MQMVPLDADEIVALMRVDDPVEHERILAVADEVKQRVYGDRMVLSAPLHLSNHCGSECLY 97 Query: 112 CFRREMVGS-QKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 C R G ++ + S + EAAL I++ +I + +G L + ++ + + + Sbjct: 98 CANRRGNGQIERKYMTSPEMREAALRLIRQGHKRI--FLVSGQ----LPNADVEYLAEAI 151 >gi|126660238|ref|ZP_01731354.1| molybdenum cofactor biosynthesis protein A [Cyanothece sp. CCY0110] gi|126618477|gb|EAZ89230.1| molybdenum cofactor biosynthesis protein A [Cyanothece sp. CCY0110] Length = 247 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 44/180 (24%) Query: 94 PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFT 150 P RI ++L + C +C FC+ +G + + + +I+ KS V F Sbjct: 3 PQRISIELTNQCSKHCHFCYNHSHHLGE------TRWQADELVDFIKDCAKSGTKAVSFG 56 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILR-FHSRVPIVDPQRINPELIQCLK-EAGKPVY 208 GG+PL + L +VL L+ + + R S ++ +L++ L V+ Sbjct: 57 GGEPLEYPN--LFEVLSELQGV----LFRSITSNGL-----HLHGDLLEKLVIANPDKVH 105 Query: 209 IAIHANHPYEFSEEAIAAISRLA-------NAGIILL------------SQSVLLKGIND 249 ++IH E EE I+++ +GI LL SQ +L GIN Sbjct: 106 LSIHY---PEQKEEVKRVINQVKLLDSLGIRSGINLLVPQSKLQVATQTSQMILEAGINR 162 >gi|94266077|ref|ZP_01289795.1| Radical SAM [delta proteobacterium MLMS-1] gi|93453360|gb|EAT03791.1| Radical SAM [delta proteobacterium MLMS-1] Length = 912 Score = 37.4 bits (86), Expect = 3.2, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 29/157 (18%) Query: 85 PLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--S 142 P IVH DR+ L++ C CRFC ++ ++ ALA+I++ Sbjct: 250 PATRIVH---DRLGLEIARGCTRGCRFCQ-AGIIYRPVREREPARLLAEALAHIEQTGFD 305 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQC 199 ++ + + GD + ++ L +++ L K + +R + + E+++ Sbjct: 306 EVALLSLSSGDYACI-NELLGRLMDALAQRKVSVSLPSMRVGT---------LTAEMMEQ 355 Query: 200 LKEAGKPVYIAIHANHPYEFSEEA-IAAISRLANAGI 235 ++ K + + EA + R+ N GI Sbjct: 356 IRRVRKTGFT---------LAPEAGSERLRRVLNKGI 383 >gi|291531854|emb|CBK97439.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Eubacterium siraeum 70/3] Length = 457 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 6/87 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF + ++ + + A+ ++ + S EV F GG+PL Sbjct: 101 LHVSHDCNLRCKYCFAQTGDFGGDRMLMKPETGKRAMDFLIKHSANRENLEVDFFGGEPL 160 Query: 156 ILSHKRLQKVLKTLRYIK--HVQILRF 180 + + + +K R I+ H + RF Sbjct: 161 MA-WDTVVETVKYARSIEKQHGKNFRF 186 >gi|327535035|gb|AEA93869.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis OG1RF] Length = 321 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 10 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 66 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 67 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 95 >gi|294780074|ref|ZP_06745450.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis PC1.1] gi|294452826|gb|EFG21252.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis PC1.1] gi|323480628|gb|ADX80067.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis 62] Length = 321 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 10 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 66 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 67 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 95 >gi|291544795|emb|CBL17904.1| DNA repair photolyase [Ruminococcus sp. 18P13] Length = 289 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 20/185 (10%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE---KSQIWEVIFTGG--D 153 + L C C +C R + E A+ +++ + + +I TG D Sbjct: 16 MNLYRGCTHGCIYCDARSTCYQMDHPFEDVEVKENAVELLEDALCRKRHRCMIGTGSMSD 75 Query: 154 PLILSHKRLQKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 P I ++L + L I+ + F ++ P R + +L++ + K V Sbjct: 76 PYIPLEQQLCHMRSCLELIQRYGFGVTFQTKSPDFL--R-DIDLMEQINHVTKCVVQMTI 132 Query: 213 ANHPYEF----------SEEAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTF 261 + + +AA+ GI ++ + LL IND PE L +++R Sbjct: 133 TTYDDVLCRILEPCVAPTSARLAALHACRKRGIPTVVWLTPLLPYINDTPENLRSILRAC 192 Query: 262 VELRI 266 + + Sbjct: 193 RDAGV 197 >gi|257416003|ref|ZP_05592997.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis AR01/DG] gi|257157831|gb|EEU87791.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis ARO1/DG] Length = 324 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98 >gi|257089787|ref|ZP_05584148.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis CH188] gi|256998599|gb|EEU85119.1| molybdenum cofactor biosynthesis protein [Enterococcus faecalis CH188] Length = 324 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98 >gi|257086842|ref|ZP_05581203.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis D6] gi|256994872|gb|EEU82174.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis D6] Length = 324 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98 >gi|257085347|ref|ZP_05579708.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis Fly1] gi|256993377|gb|EEU80679.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis Fly1] Length = 324 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98 >gi|257082638|ref|ZP_05576999.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis E1Sol] gi|256990668|gb|EEU77970.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis E1Sol] Length = 324 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98 >gi|256962021|ref|ZP_05566192.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis Merz96] gi|256952517|gb|EEU69149.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis Merz96] Length = 324 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98 >gi|256958884|ref|ZP_05563055.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis DS5] gi|257078915|ref|ZP_05573276.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis JH1] gi|256949380|gb|EEU66012.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis DS5] gi|256986945|gb|EEU74247.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis JH1] Length = 324 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98 >gi|256618973|ref|ZP_05475819.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis ATCC 4200] gi|256762400|ref|ZP_05502980.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis T3] gi|256598500|gb|EEU17676.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis ATCC 4200] gi|256683651|gb|EEU23346.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis T3] Length = 324 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98 >gi|255975948|ref|ZP_05426534.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis T2] gi|255968820|gb|EET99442.1| molybdenum cofactor biosynthesis protein A [Enterococcus faecalis T2] Length = 324 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98 >gi|255972893|ref|ZP_05423479.1| predicted protein [Enterococcus faecalis T1] gi|257422717|ref|ZP_05599707.1| conserved hypothetical protein [Enterococcus faecalis X98] gi|255963911|gb|EET96387.1| predicted protein [Enterococcus faecalis T1] gi|257164541|gb|EEU94501.1| conserved hypothetical protein [Enterococcus faecalis X98] Length = 324 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98 >gi|229545922|ref|ZP_04434647.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme [Enterococcus faecalis TX1322] gi|256853030|ref|ZP_05558400.1| conserved hypothetical protein [Enterococcus faecalis T8] gi|229308990|gb|EEN74977.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme [Enterococcus faecalis TX1322] gi|256711489|gb|EEU26527.1| conserved hypothetical protein [Enterococcus faecalis T8] Length = 324 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 13 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 69 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 70 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 98 >gi|229550115|ref|ZP_04438840.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme [Enterococcus faecalis ATCC 29200] gi|229304819|gb|EEN70815.1| possible molybdenum (Mo2+) cofactor biosynthesis enzyme [Enterococcus faecalis ATCC 29200] Length = 321 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 8/91 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVG---SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 D + L L C + C +C G +K +L+ + L I K I +V TG Sbjct: 10 DYVRLSLTDRCDLRCTYC--MPATGLCFLKKEQLLTDDEIIFLLR-ILAKEGIKKVKLTG 66 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 G+PL+ + L ++K ++ I ++ + + Sbjct: 67 GEPLVRPN--LLSLIKRIKQISGIEKVTLTT 95 >gi|163747528|ref|ZP_02154878.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanibulbus indolifex HEL-45] gi|161379206|gb|EDQ03625.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanibulbus indolifex HEL-45] Length = 434 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 4/91 (4%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP-L 155 L + C +C FC G++ + + K E A ++ + EV G + Sbjct: 151 AFLTVQEGCDKFCAFCVVPYTRGAEV-SRPAEKVLEEARDLVER--GVREVTLLGQNVNA 207 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 L +++ L + ++ +R+ + P Sbjct: 208 YHGGMTLADLIRALAKVDGLERIRYTTSHPN 238 >gi|15894635|ref|NP_347984.1| thiamine biosynthesis protein ThiH [Clostridium acetobutylicum ATCC 824] gi|15024290|gb|AAK79324.1|AE007647_4 Thiamine biosynthesis enzyme ThiH [Clostridium acetobutylicum ATCC 824] gi|325508771|gb|ADZ20407.1| thiamine biosynthesis protein ThiH [Clostridium acetobutylicum EA 2018] Length = 472 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 4/86 (4%) Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y +RI+ L L + C C +C LS +D + +Q+ + Sbjct: 80 YGNRIVMFAPLYLSNYCVNGCVYCPYHHKNKHIARKKLSQEDVKRETIALQDMGHKRLAL 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174 G DP+ + + +KT+ IKH Sbjct: 140 EAGEDPVNNPIEYILDCIKTIYSIKH 165 >gi|16331844|ref|NP_442572.1| hypothetical protein sll0098 [Synechocystis sp. PCC 6803] gi|3287936|sp|Q55880|RLMN_SYNY3 RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|1208474|dbj|BAA10642.1| sll0098 [Synechocystis sp. PCC 6803] Length = 350 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 37/206 (17%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWE 146 GI + + C + C FC + G + S + + L +E ++ Sbjct: 96 GIPSSKRLTVCVSSQVGCAMDCNFCATGK--GGFIRNLESHEIVDQVLTVQEEFHERVSN 153 Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP----IVDPQRINPELIQCLK 201 V+F G G+PL+ L +V+K + + V + R + P +I + L Sbjct: 154 VVFMGMGEPLL----NLPQVVKAVECLNQV--VGIGQRALTISTVGLPGKI-----RQLA 202 Query: 202 EAGKPVYIAIHANHPYE-----FSEEAIAA-ISRLAN--------AGIILLSQSVLLKGI 247 + V A+ + P + A + +L G + + VLL G+ Sbjct: 203 DRHLQVTFAVSLHAPNQTLRQSLIPSARHYPLEQLLADCRAYVETTGRRVTFEYVLLAGV 262 Query: 248 NDDPEILANLMRTFV----ELRIKPY 269 ND P L + + + PY Sbjct: 263 NDQPVHAEELAQKLRGFQTHVNLIPY 288 >gi|238759763|ref|ZP_04620921.1| Molybdenum cofactor biosynthesis protein A [Yersinia aldovae ATCC 35236] gi|238701995|gb|EEP94554.1| Molybdenum cofactor biosynthesis protein A [Yersinia aldovae ATCC 35236] Length = 326 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 28/163 (17%), Positives = 57/163 (34%), Gaps = 21/163 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + VC C +C + LS + ++ TGG+P + Sbjct: 17 LSVTDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRVSRAFAL-LGTEKIRLTGGEPSMRR 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216 ++ T+R ++ L + R+ + Q ++AG I + + P Sbjct: 76 D--FTDIIATIRQNPAIRTL-----AVTTNGYRLARDAAQW-RDAGLT-AINVSVDSLDP 126 Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250 +F + + I +AG + +VL++ +ND Sbjct: 127 RQFHAITGQDKFHQVMQGIDAAFDAGFDKVKINAVLMRDVNDR 169 >gi|224540006|ref|ZP_03680545.1| hypothetical protein BACCELL_04918 [Bacteroides cellulosilyticus DSM 14838] gi|224518373|gb|EEF87478.1| hypothetical protein BACCELL_04918 [Bacteroides cellulosilyticus DSM 14838] Length = 432 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G K ++ + Y+ K E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--KHVSRPMEEILDEVRYLVSKGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + + L ++++ + + V+ +R H P P +L + ++E Sbjct: 196 GVD--LYKKQMLPELIERISEVPGVEWIRLHYAYPAHFPM----DLFRVMRERPN 244 >gi|218131133|ref|ZP_03459937.1| hypothetical protein BACEGG_02738 [Bacteroides eggerthii DSM 20697] gi|217986653|gb|EEC52987.1| hypothetical protein BACEGG_02738 [Bacteroides eggerthii DSM 20697] Length = 432 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 43/115 (37%), Gaps = 14/115 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISRPI--EEILDEVRYLVARGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + + L ++++ + + V+ +R H P P +L + ++E Sbjct: 196 GVD--LYKKQMLPELIERISDVPGVEWIRLHYAYPAHFPM----DLFRVMRERSN 244 >gi|160882776|ref|ZP_02063779.1| hypothetical protein BACOVA_00737 [Bacteroides ovatus ATCC 8483] gi|156111800|gb|EDO13545.1| hypothetical protein BACOVA_00737 [Bacteroides ovatus ATCC 8483] Length = 436 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 69/227 (30%), Gaps = 71/227 (31%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGHHISKPI--EEILDEVRYLVSQGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G D + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 + L+ I+D+ + LMR Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316 ++ E+ +++ + ++ G+ + ++ PG Sbjct: 268 --------------VSKEDTYQLIEQFRREVPGIHLRTTLMVGHPGE 300 >gi|310642492|ref|YP_003947250.1| iron-only hydrogenase maturation protein hydg [Paenibacillus polymyxa SC2] gi|309247442|gb|ADO57009.1| Iron-only hydrogenase maturation protein HydG [Paenibacillus polymyxa SC2] Length = 470 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 7/89 (7%) Query: 93 YPDRILLK----LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y +RI+L + + C C +C + S + L+ ++ + +QE V+ Sbjct: 80 YGNRIVLFAPLYVSNHCVNNCEYCGYKHTNDSFTRSRLTPEELVEEVRVLQELGHKRLVL 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 G DP+ + ++ LR I V++ Sbjct: 140 EAGEDPVHCP---IDYIVDCLRQIYEVKV 165 >gi|260170245|ref|ZP_05756657.1| putative Fe-S oxidoreductase [Bacteroides sp. D2] gi|315918608|ref|ZP_07914848.1| conserved hypothetical protein [Bacteroides sp. D2] gi|313692483|gb|EFS29318.1| conserved hypothetical protein [Bacteroides sp. D2] Length = 436 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 28/227 (12%), Positives = 70/227 (30%), Gaps = 71/227 (31%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGHHISKPI--EEILDEVRYLVSQGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 G D + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRERDN----- 244 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYY 270 + L+ I+D+ + LMR Sbjct: 245 ------------VCKYMDIA-------------LQHISDN---MLKLMRRQ--------- 267 Query: 271 LHHPDLAAGTSHFRLTIEEGQKIVASLKEKISGL-CQPFYILDLPGG 316 ++ E+ +++ ++++ G+ + ++ PG Sbjct: 268 --------------VSKEDTYQLIEQFRKEVPGIHLRTTLMVGHPGE 300 >gi|256821212|ref|YP_003142411.1| Radical SAM domain-containing protein [Anaerococcus prevotii DSM 20548] gi|256799192|gb|ACV29846.1| Radical SAM domain protein [Anaerococcus prevotii DSM 20548] Length = 518 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 14/112 (12%) Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113 D I ++ I + N L + + I + + ++ + L++ C + C++C Sbjct: 89 DAINKESILSATKFNCLTGKTYEQIDEIIDNKIQNVT--------LEVTEKCNLRCKYCI 140 Query: 114 RREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWE---VIFTGGDPLILSH 159 E + + D E A+ +++ SQ + + F GG+PLI Sbjct: 141 YNESHPEYRAFGHKNMDWEVAKKAVDFLKAHSQNSDERHIGFYGGEPLINYD 192 >gi|227500012|ref|ZP_03930091.1| radical SAM-family protein [Anaerococcus tetradius ATCC 35098] gi|227217909|gb|EEI83196.1| radical SAM-family protein [Anaerococcus tetradius ATCC 35098] Length = 518 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 14/112 (12%) Query: 54 DPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCF 113 D I ++ I + N L + + I + + ++ + L++ C + C++C Sbjct: 89 DAINKESILSATKFNCLTGKTYEQIDEIIDNKIQNVT--------LEVTEKCNLRCKYCI 140 Query: 114 RREMVGSQKGTVLSSKDTE---AALAYIQEKSQIWE---VIFTGGDPLILSH 159 E + + D E A+ +++ SQ + + F GG+PLI Sbjct: 141 YNESHPEYRAFGHKNMDWEVAKKAVDFLKAHSQNSDERHIGFYGGEPLINYD 192 >gi|193216143|ref|YP_001997342.1| radical SAM domain-containing protein [Chloroherpeton thalassium ATCC 35110] gi|193089620|gb|ACF14895.1| Radical SAM domain protein [Chloroherpeton thalassium ATCC 35110] Length = 353 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 1/90 (1%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 P ++L + C + C +C+ R + +S + E AL + + V TGG Sbjct: 8 KPRNVMLMVTGDCNLTCAYCYERGDAKYKSRRPMSLEIAEKALRLAASSGKAFHVQLTGG 67 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 +P + L+ ++K R + + + Sbjct: 68 EPTLEQDLVLE-IIKKTRAVSPESTISLQT 96 >gi|169795655|ref|YP_001713448.1| molybdopterin biosynthesis, protein A [Acinetobacter baumannii AYE] gi|169148582|emb|CAM86448.1| molybdopterin biosynthesis, protein A [Acinetobacter baumannii AYE] Length = 346 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 15/160 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C K +LS + +++ ++ I + TGG+PL+ Sbjct: 29 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCSFMVQQ-GIESIRITGGEPLM-- 85 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216 + + ++ L+ +K + + R + + Q LK+AG + I++ + P Sbjct: 86 RQGIVHFVRDLQALKALGLKRIS----MTTNGHYLAKYAQQLKDAGLDDLNISLDSLDPI 141 Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + E + I +AG+ VL+K NDD Sbjct: 142 QFKELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDD 181 >gi|70607233|ref|YP_256103.1| hypothetical protein Saci_1489 [Sulfolobus acidocaldarius DSM 639] gi|68567881|gb|AAY80810.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639] Length = 323 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 59/157 (37%), Gaps = 22/157 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P K+ C ++C FC + + S++ + + ++ S I + F GG+ Sbjct: 23 PAYATFKVTSRCNLHCSFC--NPSYYNGELGESSTEKVKKMIDNMR-DSSIVVLSFEGGE 79 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 P +++ + L H + + R+N E L + + +H Sbjct: 80 P------TIRQDILELLEYAHDGSFYV---MLTTNGYRLNDESF--LSKLADRIDF-LHY 127 Query: 214 N----HPYEFSEEAIAAISRLANAGIILLSQSVLLKG 246 + H +AI + R + G+ + Q+V+ + Sbjct: 128 SIDEYHWN---AKAIDNLQRFRDYGLKVNVQTVVTRY 161 >gi|57239481|ref|YP_180617.1| hypothetical protein Erum7550 [Ehrlichia ruminantium str. Welgevonden] gi|58579459|ref|YP_197671.1| hypothetical protein ERWE_CDS_07950 [Ehrlichia ruminantium str. Welgevonden] gi|57161560|emb|CAH58487.1| conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] gi|58418085|emb|CAI27289.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Welgevonden] Length = 413 Score = 37.4 bits (86), Expect = 3.3, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 26/130 (20%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R L+++ + C C FC + G+ + E + +++ + EV+FTG Sbjct: 126 KSRALIEIQNGCNHECTFCVITKARGNNRSLH-----IEDIITQVKDCVNNGYNEVVFTG 180 Query: 152 GDPLILSHKRLQKVLKT---------LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 D +S + + L I ++ LR S + + + I +LI + Sbjct: 181 VD---ISDFGIDIYGQRMLGVMIKRVLGAIPQLRRLRL-SSIDVAE---IEDDLIDII-- 231 Query: 203 AGKPVYIAIH 212 G H Sbjct: 232 -GNEPRFMPH 240 >gi|329765915|ref|ZP_08257480.1| radical SAM domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] gi|329137621|gb|EGG41892.1| radical SAM domain-containing protein [Candidatus Nitrosoarchaeum limnia SFB1] Length = 293 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 13/85 (15%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIFTGGDP 154 ++ ++ C C FC +M S++ + + + + + ++ ++ GD Sbjct: 19 LIFQVTLGCSFNECSFC---DMYRSKQYSERPWDEVKLEIDLMAKQLPDTRKIFLADGDA 75 Query: 155 LILSHKRLQKVLKTL-RYIKHVQIL 178 L L + + K++K L +++ + Sbjct: 76 LNLDSEYIVKIVKYLYEKFPNLERI 100 >gi|308069436|ref|YP_003871041.1| thiamine biosynthesis enzyme thiH [Paenibacillus polymyxa E681] gi|305858715|gb|ADM70503.1| Thiamine biosynthesis enzyme ThiH [Paenibacillus polymyxa E681] Length = 470 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 38/89 (42%), Gaps = 7/89 (7%) Query: 93 YPDRILLK----LLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y +RI+L + + C C +C + S + L+ ++ + +QE V+ Sbjct: 80 YGNRIVLFAPLYVSNHCVNNCEYCGYKHTNDSFTRSRLTPEELVEEVRVLQELGHKRLVL 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 G DP+ + ++ LR I V++ Sbjct: 140 EAGEDPVHCP---IDYIVDCLRQIYEVKV 165 >gi|291458549|ref|ZP_06597939.1| tRNA modification enzyme, MiaB family [Oribacterium sp. oral taxon 078 str. F0262] gi|291419082|gb|EFE92801.1| tRNA modification enzyme, MiaB family [Oribacterium sp. oral taxon 078 str. F0262] Length = 460 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 22/125 (17%), Positives = 47/125 (37%), Gaps = 26/125 (20%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG---- 151 R LK+ C +C +C + G + L D + + E E++ TG Sbjct: 147 RAFLKVQDGCGQFCSYCIIPYLRGEIRSRALP--DILREVRALSE-GGYREIVLTGIHLS 203 Query: 152 -------GD------PLI--LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL 196 GD L + L +++ + + ++ +R S ++P+ I+ + Sbjct: 204 SYGMESCGDRERRERAFNAALPSESLLSLIREVASVSGIERVRLGS----LEPRIISRDF 259 Query: 197 IQCLK 201 ++ L Sbjct: 260 VRALS 264 >gi|213158400|ref|YP_002319698.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii AB0057] gi|215483142|ref|YP_002325349.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii AB307-0294] gi|301345476|ref|ZP_07226217.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii AB056] gi|301510810|ref|ZP_07236047.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii AB058] gi|301595060|ref|ZP_07240068.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii AB059] gi|332852472|ref|ZP_08434211.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii 6013150] gi|332871325|ref|ZP_08439874.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii 6013113] gi|213057560|gb|ACJ42462.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii AB0057] gi|213988902|gb|ACJ59201.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii AB307-0294] gi|332729174|gb|EGJ60517.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii 6013150] gi|332731609|gb|EGJ62895.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii 6013113] Length = 343 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 33/160 (20%), Positives = 66/160 (41%), Gaps = 15/160 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C K +LS + +++ ++ I + TGG+PL+ Sbjct: 26 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCSFMVQQ-GIESIRITGGEPLM-- 82 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216 + + ++ L+ +K + + R + + Q LK+AG + I++ + P Sbjct: 83 RQGIVHFVRDLQALKALGLKRIS----MTTNGHYLAKYAQQLKDAGLDDLNISLDSLDPI 138 Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + E + I +AG+ VL+K NDD Sbjct: 139 QFKELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKDKNDD 178 >gi|206901313|ref|YP_002251416.1| heme biosynthesis protein, putative [Dictyoglomus thermophilum H-6-12] gi|206740416|gb|ACI19474.1| heme biosynthesis protein, putative [Dictyoglomus thermophilum H-6-12] Length = 326 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 24/105 (22%), Positives = 42/105 (40%), Gaps = 5/105 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW--EVIFTGGDPLI 156 + C + CR C++ S++ +A +K V TGG+PLI Sbjct: 9 WHITDFCNLRCRHCYQENFDRSRELPFEKLVHIIEDIATFLKKEGFDRLSVNLTGGEPLI 68 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 L ++LKTL + V + + + P ++ E + LK Sbjct: 69 YP--HLNQILKTLNKVDIVHEINIITNGIL-SPNKVIEESYEKLK 110 >gi|77163772|ref|YP_342297.1| tRNA-i(6)A37 modification enzyme MiaB [Nitrosococcus oceani ATCC 19707] gi|254435338|ref|ZP_05048845.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus oceani AFC27] gi|123757951|sp|Q3JEH9|MIAB_NITOC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|76882086|gb|ABA56767.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus oceani ATCC 19707] gi|207088449|gb|EDZ65721.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Nitrosococcus oceani AFC27] Length = 447 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 27/157 (17%), Positives = 51/157 (32%), Gaps = 34/157 (21%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151 + ++ C YC FC V S+ + +A I + + E+ G Sbjct: 148 TAFVSVMEGCSKYCSFC-----VVPYTRGEEISRPFDDVIAEIVGLAEQGVREITLLGQN 202 Query: 152 ----------GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 GD L ++ + I+ ++ +RF + P+ + LIQ Sbjct: 203 VNAYRGSIGEGD-----TADLALLIHYVASIEGIERIRFTTSHPV----EFSDSLIQAFA 253 Query: 202 EAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILL 238 E + H + P + + L G +L Sbjct: 254 EVP---ALVSHLHLPVQ---SGSDRMLSLMKRGHTVL 284 >gi|89069602|ref|ZP_01156941.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola granulosus HTCC2516] gi|89044800|gb|EAR50900.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola granulosus HTCC2516] Length = 437 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 16/93 (17%), Positives = 37/93 (39%), Gaps = 5/93 (5%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153 L + C +C FC G++ + + + + A A ++ + E+ G + Sbjct: 152 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPAERVVDEARALVEA--GVREITLLGQNVN 208 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 L +++TL I ++ +R+ + P Sbjct: 209 AYHGHEGGLAGLVRTLAAIDGLERIRYTTSHPN 241 >gi|125625194|ref|YP_001033677.1| hypothetical protein llmg_2436 [Lactococcus lactis subsp. cremoris MG1363] gi|124494002|emb|CAL99000.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris MG1363] Length = 275 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 4/85 (4%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ + L + C C +CF +EM + S +D E Y+++ + V GGD Sbjct: 10 PIKVYIYLTNHCHYECDYCFLKEMKMLNTKEI-SKEDLEKIAYYLEKYK-VPLVAICGGD 67 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 P++ L ++ L K+ I+ Sbjct: 68 PILHP--SLINFVQLLSEHKNYPII 90 >gi|20807443|ref|NP_622614.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis MB4] gi|20515967|gb|AAM24218.1| 2-methylthioadenine synthetase [Thermoanaerobacter tengcongensis MB4] Length = 437 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 7/116 (6%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C YC +C G + ++ + E E++ TG Sbjct: 142 RTRAYIKIEDGCNQYCTYCIIPYARGPVRSR--KPENIIKEVKKYAEH-GYKEIVLTGIH 198 Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L + L V+K + ++ ++ +R S P + + EL K Sbjct: 199 IASYGRDLKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTEDVVKELANLPKMCRH 254 >gi|254172863|ref|ZP_04879537.1| probable molybdenum cofactor biosynthesis protein A [Thermococcus sp. AM4] gi|214033019|gb|EEB73847.1| probable molybdenum cofactor biosynthesis protein A [Thermococcus sp. AM4] Length = 308 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 36/170 (21%), Positives = 68/170 (40%), Gaps = 41/170 (24%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C FC R + + + + ++ E + I + I +V TGG+P + Sbjct: 16 ISLTQECNFRCFFCHREGQRFLAKNE---MMPEEIERLVR-IASRLGIRKVKLTGGEPTV 71 Query: 157 LSHKRLQKVLKTLRYI-KHVQILRF---HSRVPIVDPQRINPELIQCLKEAGK-PVYIAI 211 +++ +R I +V+ L SR+ EL + L +AG V +++ Sbjct: 72 RED-----IIEIVRRIKPYVKDLSMTTNGSRL---------KELAEPLAKAGLDRVNVSL 117 Query: 212 HANHP---YEFSEE---------AIAAISRLANAGIILLSQSVLLKGIND 249 H+ P + A+ L+ L+ +V +KG+ND Sbjct: 118 HSLKPDVYKRITGVDIFETVLEGIEEAVKYLSPVK---LNMTV-MKGLND 163 >gi|197103746|ref|YP_002129123.1| molybdenum cofactor biosynthesis protein A [Phenylobacterium zucineum HLK1] gi|196477166|gb|ACG76694.1| molybdenum cofactor biosynthesis protein A [Phenylobacterium zucineum HLK1] Length = 341 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 15/73 (20%), Positives = 33/73 (45%), Gaps = 3/73 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C + C +C M K VL+ ++ + + + ++ TGG+PL+ Sbjct: 27 LSVTDRCDLRCVYCMAEHMTFLPKAQVLTLEELDRIASAFVA-LGVRKLRLTGGEPLV-- 83 Query: 159 HKRLQKVLKTLRY 171 K + ++++ L Sbjct: 84 RKGVMELIEALSR 96 >gi|170782849|ref|YP_001711183.1| molybdenum cofactor biosynthesis protein A [Clavibacter michiganensis subsp. sepedonicus] gi|169157419|emb|CAQ02608.1| molybdenum cofactor biosynthesis protein A [Clavibacter michiganensis subsp. sepedonicus] Length = 361 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 30/163 (18%), Positives = 58/163 (35%), Gaps = 19/163 (11%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C E + + L + E + + +V FTGG+PL+ Sbjct: 40 ISLTDRCNLRCTYCMPAEGLPFTPDRQALQLAEIERLVRIGTRDLGVRQVRFTGGEPLLR 99 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216 L +++ + + + Q LK+AG + +++ + H Sbjct: 100 RD--LIEIIAACAALPDRPEISLTTNAIG------LASRAQALKDAGLDRINVSLDSVHA 151 Query: 217 YEFSEEAIAAISRLANAGI---------ILLSQSVLLKGINDD 250 F GI + +VL++G+NDD Sbjct: 152 ETFRLITRRPFLDRVLDGIDAAAAAGLTPIKINAVLVRGVNDD 194 >gi|159041911|ref|YP_001541163.1| radical SAM domain-containing protein [Caldivirga maquilingensis IC-167] gi|157920746|gb|ABW02173.1| Radical SAM domain protein [Caldivirga maquilingensis IC-167] Length = 384 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 12/108 (11%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C + C C+ G L++++ + E + ++FTGG+PL+ Sbjct: 38 VSWNITRRCNLKCLHCYISA--GDADENELTTEEAMNLVEQFSELK-VPLILFTGGEPLM 94 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 L L + + +R I E+ L EAG Sbjct: 95 RGD------LIKLAHYARDKGIRIALSTNGTL---ITREMASKLAEAG 133 >gi|310828942|ref|YP_003961299.1| hypothetical protein ELI_3376 [Eubacterium limosum KIST612] gi|308740676|gb|ADO38336.1| hypothetical protein ELI_3376 [Eubacterium limosum KIST612] Length = 346 Score = 37.4 bits (86), Expect = 3.4, Method: Composition-based stats. Identities = 28/151 (18%), Positives = 46/151 (30%), Gaps = 12/151 (7%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 R L++ + C C +C R G K LS + A + V+ G DP Sbjct: 52 TRGLIEFSNYCKNDCYYCGIRRGNGCVKRYRLSEDNIMDCCATGYKLGFRTFVLQGGEDP 111 Query: 155 LILSHKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 + R+ +++ +R I L R + + L + Sbjct: 112 WF-NDDRMCRIVGRIRHTYPDCAI----TLSLGERSAESYKRLYAAGANRYLLRHETANF 166 Query: 209 IAIHANHPYEFSEEAIAAI-SRLANAGIILL 238 H HP S E L + G + Sbjct: 167 SHYHTLHPKALSPERRQRCLYNLKSIGYQVG 197 >gi|332675311|gb|AEE72127.1| putative oxygen-independent coproporphyrinogen-III oxidase [Propionibacterium acnes 266] Length = 407 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 20/125 (16%), Positives = 44/125 (35%), Gaps = 22/125 (17%) Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGS 120 P + ++ + + + P G Y + C C +C F ++ + Sbjct: 6 PYPRIMRRTMTHADNSLPELH--PADGPWSIY------LHVPFCASRCGYCDFNTYVLSA 57 Query: 121 QKGTV------LSSKDTEAALAYIQ-EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173 + ++ E A + + + + F GG P +LS +L ++ I Sbjct: 58 MGDDAVAGYLDAAHQELELAADALGDAQPPVSTIFFGGGTPTMLSPVQLGEL------ID 111 Query: 174 HVQIL 178 H++ L Sbjct: 112 HIRTL 116 >gi|325661547|ref|ZP_08150171.1| hypothetical protein HMPREF0490_00905 [Lachnospiraceae bacterium 4_1_37FAA] gi|325472074|gb|EGC75288.1| hypothetical protein HMPREF0490_00905 [Lachnospiraceae bacterium 4_1_37FAA] Length = 484 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 20/130 (15%) Query: 80 DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALA 136 ++ H + L + C ++C+ C+ V K + K +A Sbjct: 88 EDEEIKAPN-THYIIRTVTLNITDKCNLFCKHCYIGASSRKVQFMK-LQDAKKVVDAIWP 145 Query: 137 YIQEKSQIWEVIFTGGDPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 Y+ I +GG+ L+ + L+ + + ++ + I P Sbjct: 146 YM--NPS-CSFIVSGGEALLNPDCIEILEYITSR--GKGKINLVTNGT--------TITP 192 Query: 195 ELIQCLKEAG 204 EL L + Sbjct: 193 ELADKLSKIR 202 >gi|325263702|ref|ZP_08130435.1| radical SAM protein, family [Clostridium sp. D5] gi|324030740|gb|EGB92022.1| radical SAM protein, family [Clostridium sp. D5] Length = 308 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 30/147 (20%) Query: 110 RFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTL 169 R C E + + K + + + +AY+Q + + + RL+++ Sbjct: 62 RACSISEQIAAGKRELSGKRPVHSYIAYLQAYTNTYAPVC-----------RLEELYMEA 110 Query: 170 RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYI--AIHANHP--------- 216 V+IL +R P + ++++ L KPV+I + HP Sbjct: 111 IADPEVRILSIATR-----PDCLGTDVLELLGRINRIKPVWIELGLQTIHPATARYIRRG 165 Query: 217 YEFSEEAIAAISRLANAGIILLSQSVL 243 YE A+ L + GI ++ ++L Sbjct: 166 YEL-PVFEKAVRDLRSMGITVIVHTIL 191 >gi|312886291|ref|ZP_07745904.1| MiaB-like tRNA modifying enzyme [Mucilaginibacter paludis DSM 18603] gi|311301236|gb|EFQ78292.1| MiaB-like tRNA modifying enzyme [Mucilaginibacter paludis DSM 18603] Length = 440 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 14/126 (11%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-- 151 R LK+ C C FC G+ + + E A A I S + E++ TG Sbjct: 142 RTRTFLKVQDGCDYSCTFCTIPLARGASRSDTV-ESVLEQARA-IAA-SGVKEIVLTGVN 198 Query: 152 -GDPLI---LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 GD I + ++K L + + +R S ++P + E+I+ K Sbjct: 199 IGDYGIRDGKREHKFFDLVKALDEVDGIDRIRISS----IEPNLLTDEIIE-FVAVSKRF 253 Query: 208 YIAIHA 213 H Sbjct: 254 APHFHI 259 >gi|288932367|ref|YP_003436427.1| radical SAM protein [Ferroglobus placidus DSM 10642] gi|288894615|gb|ADC66152.1| Radical SAM domain protein [Ferroglobus placidus DSM 10642] Length = 506 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 34/153 (22%), Positives = 58/153 (37%), Gaps = 23/153 (15%) Query: 67 LNILPEEREDPIGDNNHSPLK-GI--VHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQK 122 E+P D P G+ H+ +L + L + C + C +CF ++K Sbjct: 59 FGADGYGIENPQVDEVDCPFTCGLCRAHKSHTALLNIVLTNRCNIACWYCF----FYAKK 114 Query: 123 GTVLSSKDTEAALAYIQEKSQI-----WEVIFTGGDPLILSHKRLQKVLKTL--RYIKHV 175 + E ++ + V TGG+P L L +++K + I HV Sbjct: 115 AGYVYEPTIEQIRHMVRVAKNLKPVGCNAVQLTGGEP-TLRDD-LVEIVKAIKEEGIDHV 172 Query: 176 QILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 Q+ R+ +PEL+ L+EAG Sbjct: 173 QLNTNGLRLAE------DPELVMSLREAGVNTI 199 >gi|261417376|ref|YP_003251059.1| hypothetical protein Fisuc_2997 [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373832|gb|ACX76577.1| conserved hypothetical protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302328091|gb|ADL27292.1| radical SAM protein, TIGR01212 family [Fibrobacter succinogenes subsp. succinogenes S85] Length = 295 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 26/146 (17%), Positives = 46/146 (31%), Gaps = 24/146 (16%) Query: 109 CRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGDPLI---LSHKRLQ 163 C +C R +S + E YI I P + L+ Sbjct: 45 CSYCNNRSFSPVFDEAKVSIQ--EQLKKYIPKLRDKYPNAGILAYLQPYTNTHAPLEHLR 102 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE--AGKPVYIAIHANHPYEFS- 220 +++ + K + L +R P + E I+ L E KP+ + I + + Sbjct: 103 EIIDPIIKHKEIAGLAIGTR-----PDCLEDEKIEYLAELNHKKPIIVEIGLQTANDLTL 157 Query: 221 ---------EEAIAAISRLANAGIIL 237 E A+ R AG+ + Sbjct: 158 AGINRRHTLAEFEDAVKRCQAAGLTV 183 >gi|238783774|ref|ZP_04627793.1| hypothetical protein yberc0001_24510 [Yersinia bercovieri ATCC 43970] gi|238715325|gb|EEQ07318.1| hypothetical protein yberc0001_24510 [Yersinia bercovieri ATCC 43970] Length = 394 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 26/170 (15%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQE 140 S K I H I+LK+ C + C +C+ + + +S+K+ E + ++Q Sbjct: 5 SSKKSIQHL---EIILKISERCNINCDYCYVFNKGNSIADNSPARISNKNIEQLVYFLQR 61 Query: 141 -----KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ-ILRFHSRVPIVDPQRINP 194 ++ F GG+PL++ + + L + + + + I+ Sbjct: 62 ACLEYDIATLQIDFHGGEPLLMKKENFASMCDQLTTADYGRSNISLALQTNGTL---IDD 118 Query: 195 ELIQCLKEAGKPVYIAI----HANHPYEFSEE-------AIAAISRLANA 233 E I ++ V I+I H N + + + + L NA Sbjct: 119 EWISLFEQYLVYVSISIDGPKHINDRHRLDTKGRSTYEGTVRGLRMLQNA 168 >gi|153003729|ref|YP_001378054.1| molybdenum cofactor biosynthesis protein A [Anaeromyxobacter sp. Fw109-5] gi|152027302|gb|ABS25070.1| molybdenum cofactor biosynthesis protein A [Anaeromyxobacter sp. Fw109-5] Length = 351 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 32/209 (15%), Positives = 72/209 (34%), Gaps = 26/209 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + L C C +C +LS + + V TGG+P + Sbjct: 45 VSLTDRCNFRCTYC--SPAAHEPPDALLSRAELARLFRLFAA-LGVRRVRLTGGEPTLRK 101 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPY 217 +++ ++ + + R+ EL++ + AG + +++ P Sbjct: 102 DVV--ELVADAAGTPGIEDVAITTNG-----HRL-DELVEPFRGAGLGALNVSLDTLAPE 153 Query: 218 EFSEEAIAAISRLA-NAGII--------LLSQSVLLKGINDDPEILANLMRTFVELRIKP 268 + A +GI L +V++ G+N+D +A+L+R + P Sbjct: 154 RLRGVSGQAARLERILSGIDAAAGKFRSLKINTVVMPGVNED--EVADLVRYAWDRGALP 211 Query: 269 YYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 ++ A G + + E ++ + Sbjct: 212 RFIEQMPFAGGEV---VPLAEVRRRLEEA 237 >gi|78046661|ref|YP_362836.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035091|emb|CAJ22736.1| molybdenum cofactor biosynthesis protein A [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 343 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 42/113 (37%), Gaps = 15/113 (13%) Query: 70 LPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGTV 125 P+ P+ D PL+ + L ++ C C +C + V G Sbjct: 6 RPDLVTAPMQDRYGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGFDSQQR 57 Query: 126 LSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 LS E + + +V TGG+PL+ L ++ L I+ ++ L Sbjct: 58 LSFDQLETLVRAFVS-VGVTKVRLTGGEPLLRRD--LPSLIARLTAIEGIEDL 107 >gi|315185591|gb|EFU19360.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Spirochaeta thermophila DSM 6578] Length = 240 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 17/74 (22%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + C + C +C E+V L ++ A L + + + V+FTGG+PL+ Sbjct: 24 VLFTGGCNLRCPYCHNPELVEGDSEDFLPWEEIRAFLT--RRRGILKGVVFTGGEPLL-- 79 Query: 159 HKRLQKVLKTLRYI 172 L +++ +R + Sbjct: 80 KGFLPSLIEEVRGM 93 >gi|309777995|ref|ZP_07672937.1| putative ThiH protein [Erysipelotrichaceae bacterium 3_1_53] gi|308914284|gb|EFP60082.1| putative ThiH protein [Erysipelotrichaceae bacterium 3_1_53] Length = 472 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 37/89 (41%), Gaps = 4/89 (4%) Query: 90 VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 Y +RI+ L L + C C +C + LS ++ + +Q+ Sbjct: 77 QKLYGNRIVMFAPLYLSNYCVNGCVYCPYHYKNKHIRRKKLSQEEIRQEVIALQDMGHKR 136 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + TG DP+ + + + ++T+ IKH Sbjct: 137 LALETGEDPVHSPIEYVLESIRTIYDIKH 165 >gi|300311209|ref|YP_003775301.1| molybdenum cofactor biosynthesis protein A [Herbaspirillum seropedicae SmR1] gi|300073994|gb|ADJ63393.1| molybdenum cofactor biosynthesis protein A [Herbaspirillum seropedicae SmR1] Length = 393 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 19/126 (15%) Query: 55 PI--ARQFIPQKE--ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCR 110 PI RQ P E L + + + D+ PL + + + C C Sbjct: 29 PIVDYRQAFPASEAGRLAPMAVQPTGWLSDSLGRPLHDLR--------ISVTDRCNFRCV 80 Query: 111 FCFRREMVGSQ-----KGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH-KRLQK 164 +C +++ Q +L+ ++ A + ++ TGG+PL+ + + L Sbjct: 81 YCMPKDVFDKQYQFLPHSDLLTFEELTRVAAQFVAH-GVRKIRLTGGEPLLRKNIETLIG 139 Query: 165 VLKTLR 170 +L LR Sbjct: 140 MLAALR 145 >gi|294338308|emb|CBJ94347.1| hypothetical phage protein (Radical SAM family) [Campylobacter phage CPt10] Length = 318 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 41/137 (29%), Gaps = 16/137 (11%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGDP 154 R + C C +C S+ ++ ++ + GG+P Sbjct: 42 RAAIMTTDKCCFSCEYCCNSGFTDFNAAKNTKSEADLKCFNLVKAIFPRLKSAVLCGGEP 101 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+ L L + +K V IL + + LKE + + Sbjct: 102 LMC--DYLYNYLDLFKDLKDVTILT----NLLYIKDHY-----KRLKEYR-NLDLVTTY- 148 Query: 215 HPYEFSEEAIAAISRLA 231 H + + + I RL Sbjct: 149 HASQIN--SNQYIERLK 163 >gi|294627927|ref|ZP_06706506.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] gi|292597841|gb|EFF41999.1| molybdenum cofactor biosynthesis protein A [Xanthomonas fuscans subsp. aurantifolii str. ICPB 11122] Length = 343 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 10/97 (10%) Query: 89 IVHRY--PDRIL-LKLLHVCPVYCRFCFRREMV----GSQKGTVLSSKDTEAALAYIQEK 141 + RY P R L L ++ C C +C + V G LS E + Sbjct: 14 MQDRYGRPLRDLRLSVIEACNFRCGYCMPADRVPDDYGFDSQQRLSFDQLETLVRAFVS- 72 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + +V TGG+PL+ L ++ L I+ ++ L Sbjct: 73 VGVTKVRLTGGEPLLRRD--LPSLIARLTAIEGIEDL 107 >gi|254479764|ref|ZP_05093042.1| MiaB-like tRNA modifying enzyme [Carboxydibrachium pacificum DSM 12653] gi|214034296|gb|EEB75092.1| MiaB-like tRNA modifying enzyme [Carboxydibrachium pacificum DSM 12653] Length = 429 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 7/116 (6%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C YC +C G + ++ + E E++ TG Sbjct: 134 RTRAYIKIEDGCNQYCTYCIIPYARGPVRSR--KPENIIKEVKKYAEH-GYKEIVLTGIH 190 Query: 154 PLI----LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 L + L V+K + ++ ++ +R S P + + EL K Sbjct: 191 IASYGRDLKNIGLLDVIKMVHEVEGIERIRISSIEPTFLTEDVVKELANLPKMCRH 246 >gi|253576867|ref|ZP_04854192.1| thiamine biosynthesis protein ThiH [Paenibacillus sp. oral taxon 786 str. D14] gi|251843734|gb|EES71757.1| thiamine biosynthesis protein ThiH [Paenibacillus sp. oral taxon 786 str. D14] Length = 478 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 47/120 (39%), Gaps = 8/120 (6%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLK----LLHVCPVYCRFCFRREM 117 EE +L +D + + + + + R Y +RI+L + + C C +C ++ Sbjct: 49 SAEEAAVLLNVEDDVLLEEIYHAAREVKERIYGNRIVLFAPLYVSNYCVNNCEYCGYKQS 108 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 L+ ++ + +Q+ + G DP + +L+ + I V++ Sbjct: 109 NRGMVRRRLNREELIREVEVLQQLGHKRLALEAGEDPEHCP---IDYILECIETIYSVKV 165 >gi|298529802|ref|ZP_07017205.1| Radical SAM domain protein [Desulfonatronospira thiodismutans ASO3-1] gi|298511238|gb|EFI35141.1| Radical SAM domain protein [Desulfonatronospira thiodismutans ASO3-1] Length = 360 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 40/202 (19%), Positives = 72/202 (35%), Gaps = 32/202 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDP 154 + ++ C + C C G + DT A + I Q+ VIFTGG+P Sbjct: 20 VAWEVTRSCNLACSHCRAEAHPEPYPGEL----DTAQARSLIDTFPQVGNPVVIFTGGEP 75 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ--RINPELIQCLKEAGKP-VYIAI 211 L+ + L Q LR ++ P I PE + +K +G I+I Sbjct: 76 LLRPD------IFELISYADSQGLRC-----VMAPNGTLITPENAKEIKSSGIQRCSISI 124 Query: 212 HANHPYEFS---------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 E E+++A I L +AG+ + + K D+ + ++ Sbjct: 125 DGPTAQEHDLLRGVPGAFEQSMAGIEYLKSAGVEFQINTTVTK---DNLDKFKDIFNLAR 181 Query: 263 ELRIKPYYLHHPDLAAGTSHFR 284 +L +++ + R Sbjct: 182 DLGAVAWHIFMLVPTGRGADLR 203 >gi|169825978|ref|YP_001696136.1| coproporphyrinogen III oxidase [Lysinibacillus sphaericus C3-41] gi|168990466|gb|ACA38006.1| Oxygen-independent coproporphyrinogen III oxidase 2 [Lysinibacillus sphaericus C3-41] Length = 501 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 56/136 (41%), Gaps = 17/136 (12%) Query: 105 CPVYCRFC-FRREMVGSQKGTVLSSK-------DTEAALAYIQEKS-QIWEVIFTGGDPL 155 CP C +C F +GS + + + +++ + +I + + GG P Sbjct: 183 CPTKCAYCTFPAYAIGSNRKQGRVNTFLDGLHIELREMGKWLKNNNMKITSIYWGGGTPT 242 Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213 + + + +T+ + + +R + V P I PE ++ LK+ G + + Sbjct: 243 SIEADEMDALYQTMYESFPNPETIREIT-VEAGRPDTITPEKLEVLKKWGIDRISVN--- 298 Query: 214 NHPYEFSEEAIAAISR 229 P +++E + AI R Sbjct: 299 --PQSYTDETLKAIGR 312 >gi|116619443|ref|YP_821599.1| radical SAM domain-containing protein [Candidatus Solibacter usitatus Ellin6076] gi|116222605|gb|ABJ81314.1| Radical SAM domain protein [Candidatus Solibacter usitatus Ellin6076] Length = 224 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 35/93 (37%), Gaps = 10/93 (10%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + C + C +C +GT L+ E L + V+ TGG+P+I Sbjct: 22 VFIRTSGCNLRCSWCDTPYTSWRPEGTDLT---LEQILDEVGAHPA-RHVVVTGGEPMIA 77 Query: 158 SHKRLQKVLKTLRYIK-HVQILRFHSRVPIVDP 189 + + + LR H+ I + + +P Sbjct: 78 PD--IVALTQRLRARNLHITIETAGT---VFEP 105 >gi|11499262|ref|NP_070500.1| acetolactate synthase, small subunit, putative [Archaeoglobus fulgidus DSM 4304] gi|2648892|gb|AAB89585.1| acetolactate synthase, small subunit, putative [Archaeoglobus fulgidus DSM 4304] Length = 137 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 29/78 (37%), Gaps = 3/78 (3%) Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI-KPY-YLHHPDLAAGT 280 A L AG + +VL + D P L + + + + Y Y + Sbjct: 51 TDEAYQALKEAGFTVRLTNVLAVEVEDKPGALHRIAKALGDAGVNIDYVYAFTSEKHKAL 110 Query: 281 SHFRLTI-EEGQKIVASL 297 FR+ E+ ++++ L Sbjct: 111 IIFRVDDREKAKEVLEKL 128 >gi|61657478|emb|CAI44390.1| hypothetical protein [Thermotoga sp. KOL6] Length = 397 Score = 37.4 bits (86), Expect = 3.5, Method: Composition-based stats. Identities = 25/161 (15%), Positives = 60/161 (37%), Gaps = 31/161 (19%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY----------IQEKSQIWEVI 148 +++ CP C +C + G V+ +D + L Y + Sbjct: 143 IEISRGCPFSCAYC----QTPNIAGRVVRHRDVDVILHYANLGVKHGRKLARFIASNSFG 198 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA--GKP 206 + + + + ++++++L LR + ++ + F + V P+ + E++ +K+ + Sbjct: 199 YGSKNGVTPNVEKIEELLFGLRRVG-IEEIYFGTFPSEVRPESVTDEVLSVIKKYVNNRS 257 Query: 207 VYIAIHA-----------NHPYEFSEEAIAAISRLANAGII 236 V I + H E + AI ++A G Sbjct: 258 VVIGAQSGSDRVLKIIKRGHTVE---QVEEAIEKIAAHGFT 295 >gi|192290582|ref|YP_001991187.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas palustris TIE-1] gi|226707378|sp|B3QCQ7|MOAA_RHOPT RecName: Full=Molybdenum cofactor biosynthesis protein A gi|192284331|gb|ACF00712.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas palustris TIE-1] Length = 344 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 29/168 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C +M + +L+ ++ + + + ++ TGG+PL+ Sbjct: 29 VSITDRCDFRCVYCMAEDMTFLPRADLLTLEELDRLCSAFIA-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLRYIKHVQI-----LRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + + ++++L H++ L S++ R EL C + V ++ Sbjct: 86 RRNMMSLVRSLSR--HLKTGALDELTLTTNGSQL-----ARFAAELADC---GVRRVNVS 135 Query: 211 IHANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250 + P EF A I+ AG+ + SV+LKG N+D Sbjct: 136 LDTLDPDEFRRITRWGDLDRVLAGINAARAAGLAVKINSVVLKGSNED 183 >gi|239948170|ref|ZP_04699923.1| oxygen-independent coproporphyrinogen III oxidase [Rickettsia endosymbiont of Ixodes scapularis] gi|239922446|gb|EER22470.1| oxygen-independent coproporphyrinogen III oxidase [Rickettsia endosymbiont of Ixodes scapularis] Length = 400 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 11/106 (10%) Query: 105 CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY---IQEKSQIWEVIFTGGDPLILSHKR 161 C C +C V K E + Y I + I + F GG P +++ Sbjct: 31 CLSXCPYCDFNSHVAGNIDHNQWLKSYETEIEYFKAIIQNKYIKSIFFGGGTPSLMNPVI 90 Query: 162 LQKVLKT---LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 ++ ++ L I + + + +P E + K AG Sbjct: 91 VEGIINKISNLAIIDNQTEITIET-----NPTSFETEKFKAFKSAG 131 >gi|115954674|ref|XP_001192785.1| PREDICTED: similar to MGC84142 protein, partial [Strongylocentrotus purpuratus] Length = 258 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 4/89 (4%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R+ + + + L C + C++C E V S K +LS+++ + ++ Sbjct: 61 QRHHNYLRISLTERCNLRCQYCMPEEGVTLSPKERLLSTEEILHLAKLFVS-EGVDKIRL 119 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 TGG+PL+ + ++++ LR ++ ++ + Sbjct: 120 TGGEPLVRKD--IVEIIEGLRELEGLKQI 146 >gi|115709894|ref|XP_783948.2| PREDICTED: similar to MGC84142 protein [Strongylocentrotus purpuratus] gi|115954658|ref|XP_001192455.1| PREDICTED: similar to MGC84142 protein [Strongylocentrotus purpuratus] Length = 669 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 4/89 (4%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R+ + + + L C + C++C E V S K +LS+++ + ++ Sbjct: 91 QRHHNYLRISLTERCNLRCQYCMPEEGVTLSPKERLLSTEEILHLAKLFVS-EGVDKIRL 149 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 TGG+PL+ + ++++ LR ++ ++ + Sbjct: 150 TGGEPLVRKD--IVEIIEGLRELEGLKQI 176 >gi|52143547|ref|YP_083282.1| coenzyme PQQ synthesis protein [Bacillus cereus E33L] gi|51977016|gb|AAU18566.1| coenzyme PQQ synthesis protein [Bacillus cereus E33L] Length = 342 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 38/181 (20%), Positives = 64/181 (35%), Gaps = 26/181 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y E + +FTG Sbjct: 9 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDIYEMENPML---VFTG 64 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 65 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 115 Query: 209 --------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRT 260 I H + + AI L I + +V+ D E +A L+ Sbjct: 116 SLDGPTAEIHDHFRGTEGSFQLTMNAIRYLHELKIPIQINTVVSNYNVDVLEEMAVLIEE 175 Query: 261 F 261 Sbjct: 176 L 176 >gi|78221644|ref|YP_383391.1| radical SAM family protein [Geobacter metallireducens GS-15] gi|78192899|gb|ABB30666.1| Radical SAM [Geobacter metallireducens GS-15] Length = 293 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 21/122 (17%), Positives = 40/122 (32%), Gaps = 21/122 (17%) Query: 97 ILLKLLHVCPV-YCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIWEVIFT 150 ++ ++ C +C +C G K + K E A I + V Sbjct: 18 LIFQITIGCSQNHCAYC------GMYKMKRFALKPVEEVFAEIDGIPGRYRLHVDRVFLA 71 Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINP---ELIQCLKEAGKP 206 GD L+ + L +L L ++ R S P + + ++ L+E Sbjct: 72 DGDALVYPFEGLCAILDRLAATFPNLT--RVGSYA---SPNSLTTKSVDELRMLREKRLR 126 Query: 207 VY 208 + Sbjct: 127 IV 128 >gi|309791023|ref|ZP_07685560.1| Elongator protein 3/MiaB/NifB [Oscillochloris trichoides DG6] gi|308226938|gb|EFO80629.1| Elongator protein 3/MiaB/NifB [Oscillochloris trichoides DG6] Length = 461 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 7/67 (10%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI---WE 146 Y +R+ L CPV C FC + G ++++ + I+ + Sbjct: 184 ARNYSERLPLLATKGCPVGCNFCCTPRIYG----KTFRIRESDQMIDEIKAHQNFAGKRD 239 Query: 147 VIFTGGD 153 V F+ D Sbjct: 240 VRFSFMD 246 >gi|258591742|emb|CBE68043.1| Putative pqq coenzyme synthesis protein (pqqE) [NC10 bacterium 'Dutch sediment'] Length = 371 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 47/197 (23%), Positives = 74/197 (37%), Gaps = 33/197 (16%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFTGG 152 P I +L C + C C R E + ++ LS+ + +A LA ++ + +++ TGG Sbjct: 17 PKLIYWELTRACDLVCTHC-RAEAIAARDPFELSTAEAKALLADLRAFGEPPPQLVMTGG 75 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-----KPV 207 DPL ++L+ R I + P P + E I L E G + Sbjct: 76 DPLKRPD--FFELLRHGRSIGMPVSV-----APSGTP-LLTAEAIAALAENGVMSMSLSI 127 Query: 208 YIAIHANHPY-----EFSEEAIAAISRLANAGIILLSQSVLLKGIND--DPEILANL--- 257 A +H E + AI + A I L Q IN PE + L Sbjct: 128 DGATAESHDRFRGVAGCFETTMRAIEAVRAAAIPL--Q------INTLVTPETMPELPGV 179 Query: 258 MRTFVELRIKPYYLHHP 274 R +L I + L + Sbjct: 180 FRLLRDLGIMRWSLFYL 196 >gi|283777943|ref|YP_003368698.1| coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068] gi|283436396|gb|ADB14838.1| Coproporphyrinogen dehydrogenase [Pirellula staleyi DSM 6068] Length = 446 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 54/158 (34%), Gaps = 20/158 (12%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGG 152 L + C + C FC V + + E I +Q ++ GG Sbjct: 53 LYIHIPFCEMRCGFCNLFTYSQPADDWVANYLSALGRQMEVVAEQIPA-AQFAQLALGGG 111 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVD--PQRINPELIQCLKEAGK-PVYI 209 P L L ++L+ L+ V + + V+ P + E L+ G + + Sbjct: 112 TPTFLQTAELAQLLEQLKR---VLDVPLGNLPISVEASPATTDDEKFALLRHYGVTRLSL 168 Query: 210 AIHANHPYEF--------SEEAIAAISRLANAGIILLS 239 I + + ++ AI R+ AG +L+ Sbjct: 169 GIQSFDADDLGAIGRPQKHDDVTRAIERIRRAGFPILN 206 >gi|253580177|ref|ZP_04857444.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA] gi|251848696|gb|EES76659.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA] Length = 308 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 51/142 (35%), Gaps = 17/142 (11%) Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 + L+K+ + L +R + P+ + L+ L + KPV+I + Sbjct: 97 YAPVEYLEKIFTEAISHPKIVALSIGTRPDCLSPEIVT--LLSRLNKH-KPVWIELGLQT 153 Query: 216 PYEFSE----------EAIAAISRLANAGIILLSQSVL-LKGIN--DDPEILANLMRTFV 262 +E + A+ RL I ++ ++L L G N D E + L + Sbjct: 154 IHESTARYIRRGYPLCVFDDAVKRLRKENIEVIVHTILGLPGENTADILETMEYLNHMDI 213 Query: 263 ELRIKPYYLHHPDLAAGTSHFR 284 + IK LH + + Sbjct: 214 Q-GIKLQLLHVLRGTDLAADYE 234 >gi|251779835|ref|ZP_04822755.1| Fe-S oxidoreductase [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243084150|gb|EES50040.1| Fe-S oxidoreductase [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 444 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 38/147 (25%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C C FCF ++ + T+ D ++ L+++Q V T + + + Sbjct: 86 RCSNKCIFCFIDQLPPGMRDTLYFKDD-DSRLSFLQGN----FVTLT-----NMKEEDID 135 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEE 222 +I+++H V NPEL ++ LK F+ Sbjct: 136 ------------RIIKYHISPINVSVHTTNPELRVKMLK---------------NRFAGN 168 Query: 223 AIAAISRLANAGIILLSQSVLLKGIND 249 + + +L +AGI + +Q V + IN+ Sbjct: 169 ILERLKKLTDAGITINAQVVCIPSINN 195 >gi|268317762|ref|YP_003291481.1| molybdenum cofactor biosynthesis protein A [Rhodothermus marinus DSM 4252] gi|262335296|gb|ACY49093.1| molybdenum cofactor biosynthesis protein A [Rhodothermus marinus DSM 4252] Length = 363 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 38/186 (20%), Positives = 76/186 (40%), Gaps = 21/186 (11%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAA 134 DP G R + + L+ C + CR+C E + + +L+ ++ Sbjct: 31 DPARSEADVLTDGFGRR-HTYLRISLIEHCNLRCRYCMPEEGLDWTPPEHLLTDEEIIR- 88 Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINP 194 LA + + ++ TGG+PL+ K +++++ L + ++ L + + P Sbjct: 89 LARLFVSQGVTKIRLTGGEPLL--RKGIERIVAELARLPGLRALAMTTNGL------LLP 140 Query: 195 ELIQCLKEAGK-PVYIAIHANHPYEFS--------EEAIAAISRLANAGI-ILLSQSVLL 244 + + L+ AG + I++ P F E+ + AI G L V+L Sbjct: 141 KKLDRLQAAGLTQLNISLDTLRPERFEILTRRKGFEQVLRAIDLAIARGYRPLKVNCVVL 200 Query: 245 KGINDD 250 +G N+D Sbjct: 201 RGFNED 206 >gi|212633899|ref|YP_002310424.1| arylsulfatase regulator [Shewanella piezotolerans WP3] gi|212555383|gb|ACJ27837.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Shewanella piezotolerans WP3] Length = 405 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 39/175 (22%) Query: 84 SPLKGIVHRYPDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYI-Q 139 SP KGI I+LK+ C + C +C F+ + V+ K + + +I + Sbjct: 3 SPTKGID------IVLKISERCNLACTYCYFFFQEMDTFKENTAVIKMKTIDQLVEFINK 56 Query: 140 EKSQIW----EVIFTGGDPLILSHKRLQKVLKTLRY-IK---HVQIL--RFHSRVPIVDP 189 ++ + GG+PL++ + + LR I HV ++ + Sbjct: 57 GYDELGIQSINIGLHGGEPLLIKKEHFSSICNRLRENITPEVHVNLMCQTNGT------- 109 Query: 190 QRINPELIQCLKEAGKPVYIAI----HANHPYEFS-------EEAIAAISRLANA 233 ++ E I ++ V ++I H N Y ++ + I L A Sbjct: 110 -LVDSEWISIFEQHKVNVGVSIDGPKHINDKYRIDHNGKGSYDQTVRGIKLLQQA 163 >gi|188590250|ref|YP_001920547.1| Fe-S oxidoreductase [Clostridium botulinum E3 str. Alaska E43] gi|188500531|gb|ACD53667.1| Fe-S oxidoreductase [Clostridium botulinum E3 str. Alaska E43] Length = 444 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 38/147 (25%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C C FCF ++ + T+ D ++ L+++Q V T + + + Sbjct: 86 RCSNKCIFCFIDQLPPGMRDTLYFKDD-DSRLSFLQGN----FVTLT-----NMKEEDID 135 Query: 164 KVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL-IQCLKEAGKPVYIAIHANHPYEFSEE 222 +I+++H V NPEL ++ LK F+ Sbjct: 136 ------------RIIKYHISPINVSVHTTNPELRVKMLK---------------NRFAGN 168 Query: 223 AIAAISRLANAGIILLSQSVLLKGIND 249 + + +L +AGI + +Q V + IN+ Sbjct: 169 ILERLKKLTDAGITINAQVVCIPSINN 195 >gi|251799231|ref|YP_003013962.1| radical SAM protein [Paenibacillus sp. JDR-2] gi|247546857|gb|ACT03876.1| Radical SAM domain protein [Paenibacillus sp. JDR-2] Length = 278 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 29/163 (17%), Positives = 61/163 (37%), Gaps = 30/163 (18%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE----AALAY-------IQEKSQIWEV 147 L C C++C+ REM + + + + AA Y ++ I Sbjct: 29 LNPYSGCSFACKYCYVREMPIQKFKQIPWGEWVDIKTNAADIYRNEVNKLRRKNKPINIF 88 Query: 148 IFTGGDPLILSHKRL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 + + DP + +++L+ + +++ +R P++ R + +LI LK+ Sbjct: 89 MSSATDPYQPIEREAGITRRILREMLEAPP-DLIQIQTRSPLI---RKDLDLIVLLKDKC 144 Query: 205 KPVYIAIHANHPYE-----FSEEA------IAAISRLANAGII 236 + + E F+ A + A+ L +AGI Sbjct: 145 EVLVSMT-VETDREDMKRLFAPYAPGIKLRLKALKELHDAGIT 186 >gi|114707677|ref|ZP_01440572.1| molybdenum cofactor biosynthesis protein A [Fulvimarina pelagi HTCC2506] gi|114536921|gb|EAU40050.1| molybdenum cofactor biosynthesis protein A [Fulvimarina pelagi HTCC2506] Length = 372 Score = 37.4 bits (86), Expect = 3.6, Method: Composition-based stats. Identities = 29/174 (16%), Positives = 61/174 (35%), Gaps = 41/174 (23%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C +M K +L+ ++ + + ++ TGG+PL+ Sbjct: 57 VSVTDRCDFRCVYCMAEDMEFLPKRDLLTLEELDRLSTTFIA-KGVKKLRLTGGEPLV-- 113 Query: 159 HKRLQKVLKTLRYIKHVQI---------------LRF-------HSRVPIVDPQRINPEL 196 K + ++++L H++ RF R V ++ + Sbjct: 114 RKNIMYLIRSLSR--HLETGALEELTLTTNGSQLKRFAKDLADAGVRRLNVSVDTLDADK 171 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + G E ++ + I AG+ + +V LKG ND Sbjct: 172 FRRITRWG-------------EL-KKVMEGIDAAQEAGLHVKLNAVALKGFNDS 211 >gi|148642712|ref|YP_001273225.1| pyruvate formate-lyase activating enzyme, PflA [Methanobrevibacter smithii ATCC 35061] gi|148551729|gb|ABQ86857.1| pyruvate formate-lyase activating enzyme, PflA [Methanobrevibacter smithii ATCC 35061] Length = 234 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 8/68 (11%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQEKSQIWEVIFTGGDPL 155 L+ + CP+ CR+C E++ K+ A +I V+ +GG+PL Sbjct: 19 LVIFMSKCPLACRYCHNAELLDDNTQLSFEEIKKEINDAADFIDA------VVISGGEPL 72 Query: 156 ILSHKRLQ 163 + S ++ Sbjct: 73 VQSDAVIE 80 >gi|222056745|ref|YP_002539107.1| hopanoid biosynthesis associated radical SAM protein HpnH [Geobacter sp. FRC-32] gi|221566034|gb|ACM22006.1| hopanoid biosynthesis associated radical SAM protein HpnH [Geobacter sp. FRC-32] Length = 332 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 35/189 (18%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 +YP ++L+ H+C + C C R ++S E L + E V TG Sbjct: 25 KYPLVLMLEPTHLCNLACSGCGRIREYADTIQEMMS---LEECLNSVDECPAP-VVTVTG 80 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELI---QCLKEAGKPVY 208 G+P L + L+ KH+ L+ K P + Sbjct: 81 GEPF-LYPHIFDLIDGVLKRGKHI--------------YLCTNALLLEKALDKMRPHPNF 125 Query: 209 -IAIHA-----NHPY--EFSEEAIAAISRLANA---GIILLSQSVLLKGINDDPEILANL 257 + +H H E AI + A G + + + + K D + L Sbjct: 126 TLNVHMDGMEETHDRILERKGTFKTAIEAIKKAKKLGFRVCTNTTIFK--ETDLVEIEML 183 Query: 258 MRTFVELRI 266 E+ + Sbjct: 184 FSKLEEIGV 192 >gi|62734457|gb|AAX96566.1| hypothetical protein LOC_Os11g47250 [Oryza sativa Japonica Group] gi|77552671|gb|ABA95468.1| hypothetical protein LOC_Os11g47250 [Oryza sativa Japonica Group] Length = 1004 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 20/102 (19%) Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 RL V LR H R P + + L+ G P+++ H Sbjct: 131 PPTRLAYYAAA------VGRLRLHRR-----PASVAADWC--LRLHGWPIWLVGHTTVVG 177 Query: 218 EF----SEEAIAAISRLANAGIILLSQSVLLKGINDDPEILA 255 ++AA L G + LL G+ D Sbjct: 178 RLRLHHRPASVAADWCLRLHGWPI---MPLLLGVYDFAADWC 216 >gi|323699272|ref|ZP_08111184.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio sp. ND132] gi|323459204|gb|EGB15069.1| MiaB-like tRNA modifying enzyme YliG [Desulfovibrio desulfuricans ND132] Length = 442 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 41/122 (33%), Gaps = 21/122 (17%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 P LK+ C CRFC R +L+ A Q+ E+I Sbjct: 144 PSYAYLKVSEGCSHNCRFCTIPSIRGPHRSWPVDFLLNEARLLAG--------QVPEIIV 195 Query: 150 TGGDP-LILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G D S L +L+ L I + LR + P + L+ L++ G Sbjct: 196 VGQDSTAYGSDLGPGNDLPTLLRGLAAIPDLHWLRI----MYLYPAGLTESLLGLLRDTG 251 Query: 205 KP 206 P Sbjct: 252 AP 253 >gi|309785707|ref|ZP_07680338.1| radical SAM superfamily protein [Shigella dysenteriae 1617] gi|308926827|gb|EFP72303.1| radical SAM superfamily protein [Shigella dysenteriae 1617] Length = 201 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 8/109 (7%) Query: 94 PDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVI 148 R++ + C +C FC F + + ++ E A + + + + I V Sbjct: 30 RKRLVYLHIPFCATHCTFCGFYQNRFNEDACAHYTDALIREIEMEADSVLHQSAPIHAVY 89 Query: 149 FTGGDPLILSHKRLQKVLKTLRY---IKHVQILRFHSRVPIVDPQRINP 194 F GG P LS L +++ TLR + + RV D +RI+ Sbjct: 90 FGGGMPSALSAHDLARIITTLREKLPLAPDCEITIEGRVLNFDAERIDA 138 >gi|316934848|ref|YP_004109830.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas palustris DX-1] gi|315602562|gb|ADU45097.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas palustris DX-1] Length = 344 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 30/164 (18%), Positives = 62/164 (37%), Gaps = 21/164 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL--- 155 + + C C +C +M + +L+ ++ + + + ++ TGG+PL Sbjct: 29 VSITDRCDFRCVYCMAEDMTFLPRSDLLTLEELDRLCSAFIA-KGVRKLRLTGGEPLVRR 87 Query: 156 -ILS-HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 ++S + L + L + + + + S++ R EL C V + Sbjct: 88 NMMSLVRSLSRHLDS-GALDELTLTTNGSQL-----ARFAAELADC-GVRRVNVSLDTLD 140 Query: 212 -----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 E +A I AG+ + +V+LKG N+D Sbjct: 141 PVEFRRITRWGELDR-VLAGIDAARAAGLAVKINTVVLKGCNED 183 >gi|167748881|ref|ZP_02421008.1| hypothetical protein ANACAC_03655 [Anaerostipes caccae DSM 14662] gi|317470277|ref|ZP_07929671.1| MiaB tRNA modifying enzyme YliG [Anaerostipes sp. 3_2_56FAA] gi|167651851|gb|EDR95980.1| hypothetical protein ANACAC_03655 [Anaerostipes caccae DSM 14662] gi|316902250|gb|EFV24170.1| MiaB tRNA modifying enzyme YliG [Anaerostipes sp. 3_2_56FAA] Length = 445 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 40/119 (33%), Gaps = 18/119 (15%) Query: 97 ILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 LK+ C C +C R + K+ + + V+ Sbjct: 146 AYLKIAEGCDKRCSYCIIPKIRGRF------RSVPMKELLKSARELAASGVTELVLVAQE 199 Query: 153 DPLILSH----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 L K L +LK L ++ ++ +R P+ I ELI+ +KE K V Sbjct: 200 TTLYGKDLTGKKELPTLLKELCGVEGIEWIRL----LYCYPEEITDELIRTIKEEEKVV 254 >gi|166032752|ref|ZP_02235581.1| hypothetical protein DORFOR_02467 [Dorea formicigenerans ATCC 27755] gi|166027109|gb|EDR45866.1| hypothetical protein DORFOR_02467 [Dorea formicigenerans ATCC 27755] Length = 307 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 21/145 (14%) Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAIHA 213 L+K+ ++IL +R P + +++ L E KPV+I + Sbjct: 98 YAPVDYLRKIFTEAIMHPDIRILSVATR-----PDCLGEDILNLLHELNQIKPVWIELGL 152 Query: 214 NHPYEFS----------EEAIAAISRLANAGIILLSQSVL-LKG--INDDPEILANLMRT 260 +E + A+ RL GI ++ ++L L G I + E + L Sbjct: 153 QTIHEDTASYIRRGYDLPVFEHALKRLRQMGIPVIVHTILGLPGEDIKRNLETMHYLNEH 212 Query: 261 FVELRIKPYYLHHPDLAAGTSHFRL 285 ++ IK LH + Sbjct: 213 HIQ-GIKLQLLHVLKYTDLADDYLT 236 >gi|70729189|ref|YP_258925.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens Pf-5] gi|68343488|gb|AAY91094.1| molybdenum cofactor biosynthesis protein A [Pseudomonas fluorescens Pf-5] Length = 322 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 18/76 (23%), Positives = 36/76 (47%), Gaps = 6/76 (7%) Query: 99 LKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C +C + +V +Q LS++ +AY+ E + I + TGG+PL+ Sbjct: 15 ISLTSACNYACTYCVPNGKRLVAAQDE--LSAEAMARGVAYLMEAAGIERLRITGGEPLV 72 Query: 157 LSHKRLQKVLKTLRYI 172 +L+ + + + Sbjct: 73 SP--KLEAFMGAVGRM 86 >gi|320007246|gb|ADW02096.1| Radical SAM domain protein [Streptomyces flavogriseus ATCC 33331] Length = 475 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 33/172 (19%), Positives = 55/172 (31%), Gaps = 29/172 (16%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQI 144 R L + C V C FC +G+ + A + + + + Sbjct: 43 TERKDALSLYLHIPFCEVRCGFCNLFTRIGAPDELTTRYLDALDRQATAVRDALGDDAPV 102 Query: 145 W--EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH---SRVPI---VDPQRINPEL 196 F GG P L+ L+++ R S VP+ P + Sbjct: 103 RFTSAAFGGGTPTFLTAGELERLCDIAEK-------RMGADLSAVPLSVETSPSTATADR 155 Query: 197 IQCLKEAGK-PVYIAIHANHPYEFSE--------EAIAAISRLANAGIILLS 239 + L + G V I + + E E AA+ R+ AGI +L+ Sbjct: 156 LAVLADRGTTRVSIGVQSFVDAEARAAVRPQHRSEVEAALGRIREAGIPVLN 207 >gi|171059452|ref|YP_001791801.1| coproporphyrinogen III oxidase [Leptothrix cholodnii SP-6] gi|170776897|gb|ACB35036.1| oxygen-independent coproporphyrinogen III oxidase [Leptothrix cholodnii SP-6] Length = 487 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 27/136 (19%), Positives = 53/136 (38%), Gaps = 23/136 (16%) Query: 105 CPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGGDPLILSH 159 C C +C ++V G + +++ E + ++ ++ F GG P LS Sbjct: 91 CESVCYYCACNKIVTRDHGRSTAYIDALARELELVTQTLGRGQRVSQLHFGGGTPTFLSD 150 Query: 160 KRLQKVLKTLRYIKHVQ-----ILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213 L +++ LR H++ + DP+ ++ E + LKE G V + Sbjct: 151 AELDRLMGELRRHFHIEPHGEYSIEI-------DPRTVSRERLAHLKELGFNRVSFGV-- 201 Query: 214 NHPYEFSEEAIAAISR 229 +F + A+ R Sbjct: 202 ---QDFDADVQKAVHR 214 >gi|109069068|ref|XP_001083150.1| PREDICTED: condensin-2 complex subunit G2 isoform 3 [Macaca mulatta] gi|109069070|ref|XP_001083395.1| PREDICTED: condensin-2 complex subunit G2 isoform 5 [Macaca mulatta] gi|297289763|ref|XP_002803587.1| PREDICTED: condensin-2 complex subunit G2 [Macaca mulatta] Length = 1143 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 22/191 (11%) Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173 + V + + + Y+ + E + + K+L +LK L Sbjct: 744 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 797 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 ++ L + P P+ L+ G ++IH H F E +S L + Sbjct: 798 DLESL-LQT--PGGKPRGFGEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSILEDT 850 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288 G L S+ +L I D E L R + +I YL G F++ ++ Sbjct: 851 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 907 Query: 289 EGQKIVASLKE 299 I+ ++K Sbjct: 908 RSLGIMQTVKG 918 >gi|17533767|ref|NP_494067.1| hypothetical protein F36H5.8 [Caenorhabditis elegans] gi|13592422|gb|AAK31519.1| Hypothetical protein F36H5.8 [Caenorhabditis elegans] Length = 648 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 5/51 (9%) Query: 238 LSQSVLLKGINDDPEILANLMRTFVELRIKPYY-----LHHPDLAAGTSHF 283 +QSV+LKGI P + + F E+ P Y + + D T +F Sbjct: 577 YNQSVILKGIETRPAVRRSEHHKFDEIFTLPQYSRTLDITNCDGVEATVYF 627 >gi|333029245|ref|ZP_08457306.1| MiaB-like tRNA modifying enzyme [Bacteroides coprosuis DSM 18011] gi|332739842|gb|EGJ70324.1| MiaB-like tRNA modifying enzyme [Bacteroides coprosuis DSM 18011] Length = 438 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT 150 R LK+ C +C +C F R + + ++ +AA +I Sbjct: 148 RTRFFLKVQDGCDYFCTYCTIPFARGFSRNGSIESIVNQAKQAARD---GGKEIVITGVN 204 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GD +++ ++K L ++ ++ R S ++P + E+I+ + ++ + Sbjct: 205 TGDFGKTTNETFIDLVKLLDEVEGIERFRISS----IEPNLLTDEIIEFVAQSKR---FM 257 Query: 211 IHA 213 H Sbjct: 258 PHF 260 >gi|253996369|ref|YP_003048433.1| pyrroloquinoline quinone biosynthesis protein PqqE [Methylotenera mobilis JLW8] gi|253983048|gb|ACT47906.1| coenzyme PQQ biosynthesis protein E [Methylotenera mobilis JLW8] Length = 411 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 17/94 (18%), Positives = 42/94 (44%), Gaps = 3/94 (3%) Query: 79 GDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI 138 N+ + P +L ++ + CP++C FC+ L+++ AL Sbjct: 19 HAQNNGVAASVTQTQPLWLLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDA 78 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 ++ I ++ +GG+PL+ +++++ R + Sbjct: 79 RKLGAI-QLGISGGEPLLRDD--IEEIVVEARKL 109 >gi|155241762|gb|ABT18044.1| heme d1 biosynthesis protein [Heliobacillus mobilis] Length = 391 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 41/121 (33%), Gaps = 29/121 (23%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQ--EKSQIWEVI 148 Y + + C ++C C S + + + A+ +I + ++ Sbjct: 35 YGPVVAWNVSRTCNLHCIHC------YSDSDEIDYPGELTTQEAIKFIDELADFNVPVLL 88 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRF-----HSRVPIVDPQRINPELIQCLKEA 203 +GG+PL+ + L + +R + I P++ + +K+ Sbjct: 89 LSGGEPLMRPD------IFELVAHASKRNVRVTFSTNGT--------LITPDVAKEIKKY 134 Query: 204 G 204 G Sbjct: 135 G 135 >gi|34497708|ref|NP_901923.1| ribosomal RNA large subunit methyltransferase N [Chromobacterium violaceum ATCC 12472] gi|81655644|sp|Q7NVT9|Y2253_CHRVO RecName: Full=Probable RNA methyltransferase CV_2253 gi|34103564|gb|AAQ59925.1| conserved hypothetical protein [Chromobacterium violaceum ATCC 12472] Length = 352 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 45/217 (20%), Positives = 73/217 (33%), Gaps = 42/217 (19%) Query: 104 VCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161 C V C FC M G L S + A +A + + +V+F G G+P Sbjct: 107 GCAVGCTFC----MTGKSGLLRQLGSAEIAAQVALARRIRPVKKVVFMGMGEPA----HN 158 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDP---QRINPELIQCLKEAGKPVYIAIHANHPY- 217 ++ VL+ ++++ + + R+ L Q E + +++H Sbjct: 159 MENVLEAIQWLGTDGN--IGHKNLVFSTVGDARVFERLPQL--EVKPALALSLHTTRADL 214 Query: 218 ---------EFSE----EAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVE- 263 + E A +R G + Q LL G+ND E + R Sbjct: 215 REQLLPRAPRIAPAELVELGEAYAR--RVGYPIQYQWTLLAGVNDSQEEMDAAARLLKGK 272 Query: 264 ---LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 L I PY + G R + E Q I L Sbjct: 273 YGVLNIIPY-----NSVEGDRFQRPSSERVQAIKRYL 304 >gi|32475869|ref|NP_868863.1| MiaB protein- tRNA-thiotransferase [Rhodopirellula baltica SH 1] gi|81659862|sp|Q7ULM9|MIAB_RHOBA RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|32446412|emb|CAD76240.1| probable MiaB protein-putative tRNA-thiotransferase [Rhodopirellula baltica SH 1] Length = 479 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 22/141 (15%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLS 127 E DP+ D P + L++ C +C +C R G ++S Sbjct: 146 HETFDPLRDPTMRPTPF-------QAYLRIQIGCDKFCTYCVVPNTRGPEQGRSPEEIVS 198 Query: 128 SKDTEAALAYIQEK---SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 A ++ + G D + +L+ L I ++ + + Sbjct: 199 EARVLAEQGALEITLLGQTVNSYRHRGPDG----ETDMAGLLERLHDIDGLKRI----KF 250 Query: 185 PIVDPQRINPELIQCLKEAGK 205 P+ + L++ +++ K Sbjct: 251 VTNYPKDMTARLLETIRDLPK 271 >gi|83854736|ref|ZP_00948266.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp. NAS-14.1] gi|83842579|gb|EAP81746.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp. NAS-14.1] Length = 439 Score = 37.4 bits (86), Expect = 3.7, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 21/125 (16%) Query: 75 EDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFC----FRREMVGSQKGTVLS 127 D ++ LKG R L + C +C FC R V VL+ Sbjct: 127 TDFPEEDKFEKLKG--RGKATRAPSAFLTVQEGCDKFCAFCVVPYTRGAEVSRPATRVLT 184 Query: 128 SKD--TEAALAYI----QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 E + + Q + V G D L +++K L I ++ +R+ Sbjct: 185 EARELVERGVREVTLLGQNVNAYHGVGEEGADY------TLARLIKELAKIDGLERIRYT 238 Query: 182 SRVPI 186 + P Sbjct: 239 TSHPN 243 >gi|330835444|ref|YP_004410172.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4] gi|329567583|gb|AEB95688.1| radical SAM domain-containing protein [Metallosphaera cuprina Ar-4] Length = 369 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 14/70 (20%), Positives = 27/70 (38%), Gaps = 3/70 (4%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 YP ++ + C + C C+ G+Q+ L A+ + ++ +GG Sbjct: 27 YPSVLVFNVTRNCNLRCLHCYSS--SGTQQFYDLPLSVWIEAVKQ-ASDMGVKHILLSGG 83 Query: 153 DPLILSHKRL 162 +PL L Sbjct: 84 EPLARRDLSL 93 >gi|325297732|ref|YP_004257649.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides salanitronis DSM 18170] gi|324317285|gb|ADY35176.1| Ribosomal protein S12 methylthiotransferase rimO [Bacteroides salanitronis DSM 18170] Length = 433 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 20/115 (17%) Query: 97 ILLKLLHVCPVYCRFCFR----REMVGSQKGTVLSSKDTE-----AALAYIQEKSQIWEV 147 LK+ C C +C V +L I + E+ Sbjct: 138 AYLKISEGCDRKCAYCAIPIITGRHVSRPMDEILDEVRLLVSQGVKEFQVIAQ-----EL 192 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 + G D + + L ++++ + I V+ +R H P R +L + ++E Sbjct: 193 TYYGVD--LYKKQMLPELIEKMAAIPGVKWIRLH----YAYPARFPKDLFRVMRE 241 >gi|294011401|ref|YP_003544861.1| molybdenum cofactor biosynthesis protein A [Sphingobium japonicum UT26S] gi|292674731|dbj|BAI96249.1| molybdenum cofactor biosynthesis protein A [Sphingobium japonicum UT26S] Length = 334 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 7/78 (8%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + CR+C M + +L+ ++ + + + TGG+PL+ Sbjct: 22 ISVTDRCDLRCRYCMAERMTFLPRDQILTLEEIALLADLFIAR-GVRRIRLTGGEPLVRR 80 Query: 159 HKRLQKVLKTLRYI-KHV 175 ++ +R I +HV Sbjct: 81 D-----IIDLVRRIGRHV 93 >gi|241764970|ref|ZP_04762968.1| molybdenum cofactor biosynthesis protein A [Acidovorax delafieldii 2AN] gi|241365443|gb|EER60224.1| molybdenum cofactor biosynthesis protein A [Acidovorax delafieldii 2AN] Length = 378 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 16/81 (19%), Positives = 31/81 (38%), Gaps = 7/81 (8%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F ++ +LS ++ + ++ TGG+ Sbjct: 44 ISVTDRCNFRCNYCMPKEVFDKDYAYLPHNALLSFEEITRLARLFMAH-GVRKIRLTGGE 102 Query: 154 PLILSH-KRLQKVLKTLRYIK 173 PL+ + + L L LR I Sbjct: 103 PLLRKNVEELVAQLAQLRTID 123 >gi|88705524|ref|ZP_01103234.1| Molybdenum cofactor biosynthesis protein A [Congregibacter litoralis KT71] gi|88700037|gb|EAQ97146.1| Molybdenum cofactor biosynthesis protein A [Congregibacter litoralis KT71] Length = 336 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 41/166 (24%), Positives = 78/166 (46%), Gaps = 27/166 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C C +C +M K VL+ ++ + A A+++ + ++ TGG+PL+ Sbjct: 22 LSVTDRCDFRCVYCMAEDMQFVPKSEVLTLEELAQVAQAFVRL--GVRKIRLTGGEPLV- 78 Query: 158 SHKRLQKVLKTLRYIKHVQIL---RFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213 + ++++ L ++ ++ L S++ QR L Q LK+AG K + I++ + Sbjct: 79 -RHNIMELVEQLGAMEGLEELVMTTNGSQL-----QR----LAQPLKDAGVKRLNISLDS 128 Query: 214 NHPYEFS--------EEAIAAISRLANAGII-LLSQSVLLKGINDD 250 P F E+ IA I AG + +V+++G NDD Sbjct: 129 LQPRRFRQITRVGHLEQVIAGIDAACTAGFEGIRINAVIMRGDNDD 174 >gi|85707986|ref|ZP_01039052.1| hypothetical protein NAP1_02085 [Erythrobacter sp. NAP1] gi|85689520|gb|EAQ29523.1| hypothetical protein NAP1_02085 [Erythrobacter sp. NAP1] Length = 336 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 34/168 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT-EAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C M K VL+ ++ + A +I + ++ TGG+PL+ Sbjct: 22 LSVTDRCDLRCTYCMPERMTFLPKREVLTLEELYDLASGFI--DRGVTKIRITGGEPLVR 79 Query: 158 SH---------KRLQKVLKTL-------RYIKHVQ-ILRFHSRVPIVDPQRINPELIQCL 200 ++L + L+ L + H ++R R V ++ EL L Sbjct: 80 RDIVDLIRALGRKLGEGLEELTLTTNATQLADHADALVRAGLRRVNVSLDTLDRELFAKL 139 Query: 201 KEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGIN 248 + + I+ +G+ + +V LKG N Sbjct: 140 TR--------------RDALPRVLDGIAAAKASGLKVKLNAVALKGAN 173 >gi|327480682|gb|AEA83992.1| pyrroloquinoline quinone biosynthesis protein PqqE [Pseudomonas stutzeri DSM 4166] Length = 381 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +LL+L + CP+ C FC + LS+ + +A + + ++ F+GG+P + Sbjct: 19 LLLELTYQCPLQCVFCSNPRNFADYRREELSTDEWIDVMAQARAMGAV-QIGFSGGEPTL 77 Query: 157 LSHKRLQKVLKTLRYI 172 L+ ++ + Sbjct: 78 RKD--LETLVAEADRM 91 >gi|325969734|ref|YP_004245926.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28] gi|323708937|gb|ADY02424.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28] Length = 296 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 32/148 (21%), Positives = 60/148 (40%), Gaps = 18/148 (12%) Query: 98 LLKLLHVCPVYCRFC--FRREM---VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 +L + +CP+ C +C R V +S + + + + TGG Sbjct: 19 VLFITGICPLNCFYCPVSRDRFGKDVMFINDRPVSKF-PDDIIDELDRAGS-NGLAITGG 76 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRINPELIQCLKEAGKPVYIA 210 DP+++ + ++ L L + + H + V IN + I+ L +G + Sbjct: 77 DPIMVVDRVVE--LVRLLKDTYGRDFHIHMYTHVLN-----INEDAIKKLAGSGID-EVR 128 Query: 211 IHANHPYEFSEEAIAAISRLANAGIILL 238 IHA +P + S + + L +AGI L Sbjct: 129 IHAVNPAQLSGKLGL-LKMLKDAGIELG 155 >gi|266621755|ref|ZP_06114690.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium hathewayi DSM 13479] gi|288866581|gb|EFC98879.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Clostridium hathewayi DSM 13479] Length = 320 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 23/130 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C +C +C G + + +D A + + E++ TG Sbjct: 25 HTRAFIKVTDGCNQFCSYCIIPYTRGRVRSRRM--EDVRAEVERLVA-GGYKEIVLTGI- 80 Query: 154 PLILS----------HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 LS + L ++ L + + +R S ++P+ I E + L Sbjct: 81 --HLSSYGVDFREEERRTLLDLIVYLHEVDGLLRIRLGS----LEPRIITKEFAEALAAL 134 Query: 204 GKPVYIAIHA 213 K + H Sbjct: 135 PK---VCPHF 141 >gi|167945021|ref|ZP_02532095.1| Radical SAM domain protein [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 275 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 7/72 (9%) Query: 99 LKLLHVCPVYCRFCFRR---EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + L C + C C+ GS+ L++ + +A L I+E+ V+ TGG+PL Sbjct: 9 INLTRRCNLACAHCYMDAATREAGSEAE--LTTDEVKALLDQIRERGDDTMVVLTGGEPL 66 Query: 156 ILSHKRLQKVLK 167 + L+ ++ Sbjct: 67 LRRD--LEALVA 76 >gi|218961411|ref|YP_001741186.1| translation initiation factor IF-1 [Candidatus Cloacamonas acidaminovorans] gi|167730068|emb|CAO80980.1| translation initiation factor IF-1 [Candidatus Cloacamonas acidaminovorans] Length = 80 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 4/47 (8%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 FR+T+E G +I+ SG + YI LPG KV++ +++ + Sbjct: 30 FRVTLENGHEIL----AHSSGKMRMNYIRILPGDKVKVELSPYDLTR 72 >gi|302343497|ref|YP_003808026.1| radical SAM domain protein [Desulfarculus baarsii DSM 2075] gi|301640110|gb|ADK85432.1| Radical SAM domain protein [Desulfarculus baarsii DSM 2075] Length = 297 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 25/131 (19%), Positives = 52/131 (39%), Gaps = 17/131 (12%) Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-VIFTGG 152 + IL++ C C FC ++ + + E L + Q+ + + V G Sbjct: 23 NSILIQATLGCSHNKCAFCGT---YYDKRFGIKDRQTLEQDLRFAQKHCRRQDRVFVMDG 79 Query: 153 DPLILSHKRLQKVLKTLRY-IKHVQILRFH----SRVPIVDPQRINPELIQCLKEAGKPV 207 D LI+ + +L +R + V+ R S+ + + + ++ L+E G + Sbjct: 80 DALIMPMAHWEWLLGQIREKLPWVR--RVGSYANSKSIAMK----SDDDLRRLRELGLGI 133 Query: 208 -YIAIHANHPY 217 Y + + HP Sbjct: 134 LYYGVESGHPD 144 >gi|282165058|ref|YP_003357443.1| hypothetical protein MCP_2388 [Methanocella paludicola SANAE] gi|282157372|dbj|BAI62460.1| conserved hypothetical protein [Methanocella paludicola SANAE] Length = 398 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 8/79 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ ++ H C + C C GS+ L S++ A + + +++ +I TGG+ Sbjct: 58 PRQVFWEVTHACNLRCLHCVTS--SGSKDNDELDSQEAFALIDRL-ADMKVFYLIITGGE 114 Query: 154 PLILSHKRLQKVLKTLRYI 172 P + +L+ LR+I Sbjct: 115 PFLRPD-----ILELLRHI 128 >gi|257126723|ref|YP_003164837.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Leptotrichia buccalis C-1013-b] gi|257050662|gb|ACV39846.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Leptotrichia buccalis C-1013-b] Length = 175 Score = 37.4 bits (86), Expect = 3.8, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 5/78 (6%) Query: 86 LKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 + GI RY C C C + G +L+ + E I E + + Sbjct: 31 VDGIGLRYS-----LYFAGCSHACPGCHNEYSWNPKHGNILTYEKLEEIAKEINENTLLD 85 Query: 146 EVIFTGGDPLILSHKRLQ 163 + +GGDPL + L+ Sbjct: 86 GITISGGDPLFNPVEMLK 103 >gi|327540187|gb|EGF26778.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodopirellula baltica WH47] Length = 479 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 21/141 (14%), Positives = 46/141 (32%), Gaps = 22/141 (15%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLS 127 E DP+ D P + L++ C +C +C R G ++S Sbjct: 146 HETFDPLRDPTMRPTPF-------QAYLRIQIGCDKFCTYCVVPNTRGPEQGRSPEEIVS 198 Query: 128 SKDTEAALAYIQEK---SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV 184 A ++ + G D + +L+ L I ++ + + Sbjct: 199 EARVLAEQGALEITLLGQTVNSYRHRGPDG----ETDMAGLLERLHDIDGLKRI----KF 250 Query: 185 PIVDPQRINPELIQCLKEAGK 205 P+ + L++ +++ K Sbjct: 251 VTNYPKDMTARLLETIRDLPK 271 >gi|317013730|gb|ADU81166.1| hypothetical protein HPGAM_01600 [Helicobacter pylori Gambia94/24] Length = 418 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + + + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQITGLKRIRIGS 221 >gi|297379507|gb|ADI34394.1| RNA modification enzyme, MiaB family [Helicobacter pylori v225d] Length = 418 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + + + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQITGLKRIRIGS 221 >gi|291541239|emb|CBL14350.1| DNA repair photolyase [Roseburia intestinalis XB6B4] Length = 326 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 36/194 (18%) Query: 99 LKLLHVCPVYCRFCFRR-------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 + + C C +C R + + + E AL ++ +I TG Sbjct: 54 INIYRGCSHGCIYCDSRSRCYGFTHAFEDIEVKENAPELLEKALRSKRQ----KCMIGTG 109 Query: 152 G--DPLILSHKRLQKVLKT--LRYIKHVQI-LRFHSRVPIVDPQRI--NPELIQCLKEAG 204 DP + +RL +L L I + + ++ RI + +L+ + E Sbjct: 110 AMCDPYLHVEERL--LLTRRCLELIDRYEFGVAVQTKS-----ARILRDFDLLTSINEKA 162 Query: 205 KPVYIAIHANHPYEF----------SEEAIAAISRLANAGII-LLSQSVLLKGINDDPEI 253 K + + + ++E I + + AGI ++ + +L IND + Sbjct: 163 KAIVQITLTTYDEDLCKKIEPDVSTTKERIDVLMKCKEAGIPTVVWLTPILPFINDTADN 222 Query: 254 LANLMRTFVELRIK 267 + NL+ V+ +K Sbjct: 223 IKNLLDACVDAGVK 236 >gi|238927738|ref|ZP_04659498.1| 2-methylthioadenine synthetase [Selenomonas flueggei ATCC 43531] gi|238884454|gb|EEQ48092.1| 2-methylthioadenine synthetase [Selenomonas flueggei ATCC 43531] Length = 519 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 18/110 (16%) Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQ 139 PL G+ HR R LK+ C +C FC G K L+ +++ E A Sbjct: 221 EDIPLHGVPHR--TRAFLKIEDGCQNFCSFCIIPYARGPVKSRPLAAVAREMEKLAA--- 275 Query: 140 EKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + EV+ T G D + L +T K V+ LR S Sbjct: 276 --AGFREVVLTGIHLGAYGID--LPQRPTLADACRTALRTKEVRRLRLGS 321 >gi|237738316|ref|ZP_04568797.1| biotin synthase [Fusobacterium mortiferum ATCC 9817] gi|229420196|gb|EEO35243.1| biotin synthase [Fusobacterium mortiferum ATCC 9817] Length = 345 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 24/56 (42%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R L+++ + C C++C R +S + A+ +I E + + +G Sbjct: 31 RGLIEISNKCIKNCKYCGIRRDNHKVDRFSMSKSEIMEAVKWIYENNYASIALQSG 86 >gi|297559674|ref|YP_003678648.1| oxygen-independent coproporphyrinogen III oxidase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] gi|296844122|gb|ADH66142.1| oxygen-independent coproporphyrinogen III oxidase [Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111] Length = 410 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 32/153 (20%), Positives = 56/153 (36%), Gaps = 35/153 (22%) Query: 76 DPIGDNNHSPLKGIVHRYPDRILLKLLHV--CPVYCRFC-----FRREMVGSQKGTVLSS 128 DP+ P + R L +HV C C +C E+V S Sbjct: 9 DPVPSTGELPGPSLAEL-GGRPLGFYVHVPFCVTRCGYCDFNTYTAEELVSRDGTATASR 67 Query: 129 KDT-EAALAYIQ--------EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 + + A+A + E+ + + GG P +LS + L +V+ +R R Sbjct: 68 ETYADQAIAEVALADRVLTGERPPVSTLFVGGGTPTLLSAEDLGRVVTAVRE-------R 120 Query: 180 FH--------SRVPIVDPQRINPELIQCLKEAG 204 F + +P+ + P+ + L+EAG Sbjct: 121 FGFTPDAELTTEA---NPETVTPDYLARLREAG 150 >gi|261368422|ref|ZP_05981305.1| radical SAM domain protein [Subdoligranulum variabile DSM 15176] gi|282569543|gb|EFB75078.1| radical SAM domain protein [Subdoligranulum variabile DSM 15176] Length = 484 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C +CF + + ++S + + AL ++ S EV F GG+PL Sbjct: 104 LHVAHTCNLNCSYCFAAQGKFHGEAGLMSFETGKQALDFLVAHSGTRRNLEVDFFGGEPL 163 Query: 156 ILSHKRLQKVLKTLRYIK 173 ++ + ++++ R I+ Sbjct: 164 -MNFEVCKQLVAYARSIE 180 >gi|188527091|ref|YP_001909778.1| hypothetical protein HPSH_01480 [Helicobacter pylori Shi470] gi|188143331|gb|ACD47748.1| hypothetical protein HPSH_01480 [Helicobacter pylori Shi470] Length = 418 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCSKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + + + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDKGSNIARLIKKLSQITGLKRIRIGS 221 >gi|157691712|ref|YP_001486174.1| coproporphyrinogen III oxidase [Bacillus pumilus SAFR-032] gi|157680470|gb|ABV61614.1| coproporphyrinogen oxidase [Bacillus pumilus SAFR-032] Length = 499 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 29/170 (17%), Positives = 65/170 (38%), Gaps = 18/170 (10%) Query: 72 EEREDPIGDNNHSPLKGIVHRYP---DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128 +E+ D + + L+ I Y + + + CP C +C + + + Sbjct: 145 DEKIDLMQEIVDRQLQAIPDLYDLQQEVSIYIGIPFCPTKCAYCTFPAYAIKGQAGRVGT 204 Query: 129 K------DTEAALAYIQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTL-RYIKHVQILRF 180 + + +++E ++ V F GG P ++ + + + + + R V+ +R Sbjct: 205 FLFGLHYEMQKIGDWLKEHRIKVTTVYFGGGTPTSITAEEMDLLYEEMYRSFPDVKHIRE 264 Query: 181 HSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 + V P I+P+ ++ L + I P + E + AI R Sbjct: 265 VT-VEAGRPDTISPDKLEVLNRYHIDRISIN-----PQSYENETLKAIGR 308 >gi|126736946|ref|ZP_01752681.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. SK209-2-6] gi|126721531|gb|EBA18234.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseobacter sp. SK209-2-6] Length = 440 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 33/101 (32%), Gaps = 17/101 (16%) Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 L + C +C FC R V +L ++ + + + E+ G Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRIL--REAQELVE-----RGVREITLLG 202 Query: 152 GD------PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + L +++ L I ++ +RF + P Sbjct: 203 QNVNAYHGAGANGDLTLAQLIWELDKIDGLERIRFTTSHPN 243 >gi|89896750|ref|YP_520237.1| hypothetical protein DSY4004 [Desulfitobacterium hafniense Y51] gi|89336198|dbj|BAE85793.1| hypothetical protein [Desulfitobacterium hafniense Y51] Length = 306 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 7/107 (6%) Query: 56 IARQFIPQKEELNILP-EEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR 114 + RQ I Q E+L E + ++H G H R+ L + C + CRFC R Sbjct: 1 MRRQIINQIEQLIETQMEHQLRTPNISDHPCFNGAAHGKKGRLHLPISPACNIQCRFCRR 60 Query: 115 -----REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG-GDPL 155 G KG + + + ++ +I V G GD L Sbjct: 61 ACNSKELRPGVAKGILPIEEAVDIVGKALELCPEITVVGIAGPGDAL 107 >gi|260062897|ref|YP_003195977.1| molybdenum cofactor biosynthesis protein MoaA [Robiginitalea biformata HTCC2501] gi|88784465|gb|EAR15635.1| molybdenum cofactor biosynthesis protein (MoaA) [Robiginitalea biformata HTCC2501] Length = 327 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 39/225 (17%), Positives = 83/225 (36%), Gaps = 35/225 (15%) Query: 94 PDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 +R++ L + C + C +C + + + L + + L I + ++ Sbjct: 6 HNRVINYVRLAVTDRCNLRCNYCMPEHGIDFARKSDLMTVEEMKRLCSILAGLGVDKIRI 65 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VY 208 TGG+P + K + + L + V+ + S ++ P I +KE G V Sbjct: 66 TGGEPFV--RKGVMDLFAHLGGLPEVREISVTSNATLIGPH------IDRMKELGIQSVN 117 Query: 209 IAIHANHPYEFSEEAIA--------AISRLANAGIILLSQSVLLKGIN-DDPEILANLMR 259 I++ A F+ I +L ++G+ + V+LKG N D + + Sbjct: 118 ISLDAIQAETFARITRRDEFDKVYGNIMKLVDSGMEVRINFVVLKGQNESDIYPMME-FQ 176 Query: 260 TFVELRIKPYYLHHPDLA--AGTSHFRLTIEEGQK-IVASLKEKI 301 +R++ ++ G+ F +G + + I Sbjct: 177 REFPVRVR----FLEEMPFNGGSRDF-----KGLEWNHRKILGHI 212 >gi|194334839|ref|YP_002016699.1| translation initiation factor IF-1 [Prosthecochloris aestuarii DSM 271] gi|194312657|gb|ACF47052.1| translation initiation factor IF-1 [Prosthecochloris aestuarii DSM 271] Length = 72 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 4/51 (7%) Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 + F++ +E G +I+ +SG + YI LPG KV+I +++ K Sbjct: 18 PNAQFKVELENGLEIL----AHVSGKIRMHYIRILPGDKVKVQISPYDLTK 64 >gi|315497313|ref|YP_004086117.1| miab-like tRNA modifying enzyme [Asticcacaulis excentricus CB 48] gi|315415325|gb|ADU11966.1| MiaB-like tRNA modifying enzyme [Asticcacaulis excentricus CB 48] Length = 443 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 57/148 (38%), Gaps = 20/148 (13%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 + + + G+ + R +++ + C C FC G ++ D ++ Sbjct: 139 SVRETAGHLIDGL--KDRARAYVEVQNGCDHRCTFCIIP--YGRGNSRSAAAGDVVGQIS 194 Query: 137 YIQEKSQIWEVIFTGGDPLILSH-------KRLQKVLKT-LRYIKHVQILRFHSRVPIVD 188 + EV+ TG D + S +L ++ L+++ +++ LR S +D Sbjct: 195 RLVA-EGYNEVVLTGVD--LTSWGNDLPGQPQLGHLVARILKHVPNLKRLRLSS----ID 247 Query: 189 PQRINPELIQCL-KEAGKPVYIAIHANH 215 I+ L++ +E Y+ + H Sbjct: 248 AAEIDDTLLRLFAEEERLAPYLHLSLQH 275 >gi|188586093|ref|YP_001917638.1| MiaB-like tRNA modifying enzyme YliG [Natranaerobius thermophilus JW/NM-WN-LF] gi|238066413|sp|B2A3C0|RIMO_NATTJ RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|179350780|gb|ACB85050.1| MiaB-like tRNA modifying enzyme YliG [Natranaerobius thermophilus JW/NM-WN-LF] Length = 444 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 23/113 (20%), Positives = 37/113 (32%), Gaps = 10/113 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW----EVIFTGG 152 +K+ C YC +C + G + + EA + ++ + G Sbjct: 146 AYIKIAEGCHNYCSYCAIPLIRGGYRSRTIEDIKIEANHFIEKGSKELTLIAQDTTNYGS 205 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 D I L +L L I +R V P RI LI+ + K Sbjct: 206 D--IYGKFSLDTLLDELATIPGDFWIR----VLYAYPTRITDSLIEVINRHEK 252 >gi|197118992|ref|YP_002139419.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] gi|197088352|gb|ACH39623.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] Length = 471 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 8/81 (9%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT--EAALAYIQEKSQIWEVIFTG 151 P +LL++ C + C FCF + L E A+A + +G Sbjct: 91 PCSVLLEVTDRCNLQCAFCFADAGPKGTEDPSLERISWLLERAMAAAGAC----SLQLSG 146 Query: 152 GDPLILSHKRLQKVLKTLRYI 172 G+P L L ++++ R I Sbjct: 147 GEP-TLRDD-LPEIVEAARRI 165 >gi|56963064|ref|YP_174791.1| hypothetical protein ABC1292 [Bacillus clausii KSM-K16] gi|56909303|dbj|BAD63830.1| conserved hypothetical protein [Bacillus clausii KSM-K16] Length = 369 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 44/119 (36%), Gaps = 16/119 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + +C + C C + + L + + + E ++ TGG+P +++ Sbjct: 33 VTTTTLCNMRCEHCAVGYTLSPKDPNPLP---LDLLIRRLDEIPRLRAFSITGGEP-MMN 88 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG--KPVYIAIHANH 215 K +++ + L H + ++ +IN L L+ P +H +H Sbjct: 89 MKSVREYVVPLLKYAHER----GAKT------QINSNLTMPLERYDLILPYLDVLHISH 137 >gi|238788764|ref|ZP_04632555.1| Molybdenum cofactor biosynthesis protein A [Yersinia frederiksenii ATCC 33641] gi|238723069|gb|EEQ14718.1| Molybdenum cofactor biosynthesis protein A [Yersinia frederiksenii ATCC 33641] Length = 326 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 32/181 (17%), Positives = 63/181 (34%), Gaps = 26/181 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + VC C +C + LS + ++ TGG+P + Sbjct: 17 LSITDVCNFRCTYCLPDGYRPDGLKSFLSLDEISRISRAFALLGT-EKIRLTGGEPSMRR 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216 ++ T+R ++ L + R+ + Q +EAG I + + P Sbjct: 76 D--FTDIIATIRQNPAIRTL-----AVTTNGYRLARDAAQW-REAGLT-AINVSVDSLDP 126 Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDDPEILANLMRTFVELRIK 267 +F + + I +AG + +VL++ +ND NL ++ + Sbjct: 127 RQFHTITGQDKFHQVMQGIDAAFDAGFEKVKINAVLMRDVNDR-----NLSAFLHWIKSR 181 Query: 268 P 268 P Sbjct: 182 P 182 >gi|167038098|ref|YP_001665676.1| thiamine biosynthesis protein ThiH [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167039189|ref|YP_001662174.1| thiamine biosynthesis protein ThiH [Thermoanaerobacter sp. X514] gi|256750838|ref|ZP_05491722.1| biotin and thiamin synthesis associated [Thermoanaerobacter ethanolicus CCSD1] gi|300913216|ref|ZP_07130533.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp. X561] gi|307723770|ref|YP_003903521.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp. X513] gi|320116504|ref|YP_004186663.1| biotin and thiamin synthesis associated [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166853429|gb|ABY91838.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp. X514] gi|166856932|gb|ABY95340.1| biotin and thiamin synthesis associated [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256750173|gb|EEU63193.1| biotin and thiamin synthesis associated [Thermoanaerobacter ethanolicus CCSD1] gi|300889901|gb|EFK85046.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp. X561] gi|307580831|gb|ADN54230.1| biotin and thiamin synthesis associated [Thermoanaerobacter sp. X513] gi|319929595|gb|ADV80280.1| biotin and thiamin synthesis associated [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 466 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y +RI+ L + + C CR+C R Q+ L+ ++ + ++E + Sbjct: 74 YGNRIVIFAPLYVSNYCVNNCRYCGYRH-SNEQERKKLTMEEVRREVEILEEMGHKRLAV 132 Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171 G DP+ + V+KT+ Sbjct: 133 EAGEDPVNCPIDYIIDVIKTIYD 155 >gi|229890666|sp|Q5LLM0|MIAB_SILPO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase Length = 439 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 10/119 (8%) Query: 75 EDPIGDNNHSPLKGIVHRYPD-RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSK 129 D ++ LKG L + C +C FC R V +L Sbjct: 128 TDFPEEDKFEKLKGRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRILREA 187 Query: 130 D--TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + E + I Q + G P L ++ L I ++ +RF + P Sbjct: 188 NELVERGVREITLLGQ-NVNAYHGAGP--NGDMTLAGLIWELDKIDGLERIRFTTSHPN 243 >gi|126649445|ref|ZP_01721686.1| coproporphyrinogen III oxidase [Bacillus sp. B14905] gi|126593770|gb|EAZ87693.1| coproporphyrinogen III oxidase [Bacillus sp. B14905] Length = 501 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 26/136 (19%), Positives = 57/136 (41%), Gaps = 17/136 (12%) Query: 105 CPVYCRFC-FRREMVGSQKGTVLSSK-------DTEAALAYIQEKS-QIWEVIFTGGDPL 155 CP C +C F +GS + + + ++++ + +I + + GG P Sbjct: 183 CPTKCAYCTFPAYAIGSNRKQGRVNTFLDGLHIELREMGKWLKDNNMKITSIYWGGGTPT 242 Query: 156 ILSHKRLQKVLKTL-RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA 213 + + + +T+ + + +R + V P I PE ++ LK+ G + + Sbjct: 243 SIEADEMDALYQTMYESFPNPETIREVT-VEAGRPDTITPEKLEVLKKWGIDRISVN--- 298 Query: 214 NHPYEFSEEAIAAISR 229 P +++E + AI R Sbjct: 299 --PQSYTDETLKAIGR 312 >gi|95930672|ref|ZP_01313406.1| TatD-related deoxyribonuclease [Desulfuromonas acetoxidans DSM 684] gi|95133324|gb|EAT14989.1| TatD-related deoxyribonuclease [Desulfuromonas acetoxidans DSM 684] Length = 460 Score = 37.0 bits (85), Expect = 3.9, Method: Composition-based stats. Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 3/71 (4%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 I +R D + L + + C C FC FR V + + D + +A I + S E Sbjct: 267 IAYRIRDSLYLNITNRCSNRCSFCAKFRDFHVKGHQLKLDHEPDFDEVIAAIGDPSGYEE 326 Query: 147 VIFTG-GDPLI 156 V+F G G+PL+ Sbjct: 327 VVFCGYGEPLL 337 >gi|327400377|ref|YP_004341216.1| Radical SAM domain-containing protein [Archaeoglobus veneficus SNP6] gi|327315885|gb|AEA46501.1| Radical SAM domain protein [Archaeoglobus veneficus SNP6] Length = 392 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 8/71 (11%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--- 146 + P I +L C + C+ C R +QK + TE A I++ ++ + Sbjct: 6 IREKPFIIFWELTRACMLACKHC-RAR---AQKERHPNELTTEEAFNVIEQITEFGKPYP 61 Query: 147 -VIFTGGDPLI 156 V+ TGGDPL+ Sbjct: 62 LVVITGGDPLM 72 >gi|319955886|ref|YP_004167149.1| type II restriction-modification enzyme, r and m protein [Nitratifractor salsuginis DSM 16511] gi|319418290|gb|ADV45400.1| type II restriction-modification enzyme, R and M protein [Nitratifractor salsuginis DSM 16511] Length = 1250 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 26/78 (33%), Gaps = 16/78 (20%) Query: 271 LHHPDLAAGTSHFRLTI-EEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 L D A G+ HF +++ +I + L+ + D G K + Sbjct: 522 LTICDPAVGSGHFLVSVLNTILEIKSRLR----------ILFDAEGRRIK-----DYTLE 566 Query: 330 VGNGSYCITDHHNIVHDY 347 V N I D + Y Sbjct: 567 VKNDELIIRDDEGELFGY 584 >gi|239826166|ref|YP_002948790.1| coproporphyrinogen III oxidase [Geobacillus sp. WCH70] gi|239806459|gb|ACS23524.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. WCH70] Length = 501 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 33/164 (20%), Positives = 66/164 (40%), Gaps = 21/164 (12%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALA 136 I D + + + + + + CP C +C F +G ++G+V A L Sbjct: 159 IVDRQLTVVPDLYDLAHEVSIYIGIPFCPTKCAYCTFPAYAIGGRQGSV---DAFLAGLH 215 Query: 137 Y--------IQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLR-YIKHVQILRFHSRVPI 186 Y ++E+ I + + GG P ++ + + ++ + +V+ +R + V Sbjct: 216 YEMREVGRFLKERGINITTIYYGGGTPTSITAEEMDRLYAEMYQSFPNVERVREIT-VEA 274 Query: 187 VDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 P I PE + LK+ + I P + +E + AI R Sbjct: 275 GRPDTITPEKLNVLKKWNIDRISIN-----PQSYIQETLKAIGR 313 >gi|48926954|gb|AAT47516.1| putative radical SAM superfamily protein [Propionibacterium freudenreichii] Length = 349 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + + CP C C + ++ + E +E +I V+ TGG+P L Sbjct: 15 ISVTNKCPARCAHCL--AESSPSERNHFTASEIEQIYLSARELEEIGLVVMTGGEPTELG 72 Query: 159 HKRLQKV 165 + + Sbjct: 73 DDLFEAI 79 >gi|84515221|ref|ZP_01002583.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Loktanella vestfoldensis SKA53] gi|84510504|gb|EAQ06959.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Loktanella vestfoldensis SKA53] Length = 436 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 17/95 (17%), Positives = 33/95 (34%), Gaps = 9/95 (9%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD 153 L + C +C FC V S+ + L +E + + E+ G + Sbjct: 150 TAFLTVQEGCDKFCAFC-----VVPYTRGAEVSRPADRILREARELVDAGVRELTLLGQN 204 Query: 154 --PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + L ++ L I ++ +RF + P Sbjct: 205 VNAYHGHERGLAGLIWALTEIDGLERIRFTTSHPN 239 >gi|83941259|ref|ZP_00953721.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp. EE-36] gi|83847079|gb|EAP84954.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Sulfitobacter sp. EE-36] Length = 439 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 21/125 (16%) Query: 75 EDPIGDNNHSPLKGIVHRYPDRI---LLKLLHVCPVYCRFC----FRREMVGSQKGTVLS 127 D ++ LKG R L + C +C FC R V VL+ Sbjct: 127 TDFPEEDKFEKLKG--RGKATRAPSAFLTVQEGCDKFCAFCVVPYTRGAEVSRPATRVLT 184 Query: 128 SKD--TEAALAYI----QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFH 181 E + + Q + V G D L +++K L I ++ +R+ Sbjct: 185 EARELVERGVREVTLLGQNVNAYHGVGEEGADY------TLARLIKELAKIDGLERIRYT 238 Query: 182 SRVPI 186 + P Sbjct: 239 TSHPN 243 >gi|269929146|ref|YP_003321467.1| ATPase, P-type (transporting), HAD superfamily, subfamily IC [Sphaerobacter thermophilus DSM 20745] gi|269788503|gb|ACZ40645.1| ATPase, P-type (transporting), HAD superfamily, subfamily IC [Sphaerobacter thermophilus DSM 20745] Length = 816 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 55/184 (29%), Gaps = 39/184 (21%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-------YIQEKSQIWEV 147 +R + + CP R V + S K + A Y+ ++ + Sbjct: 348 NRTIAAIAAACPG------RERKVVGEIPFSSSRKWSALAFDDAEGRGFYVLGAPEMIQP 401 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPE-LIQCLKEAGKP 206 D L R+ + RV + R NP L E P Sbjct: 402 ALRSADGLQ---PRVDAWTER------------GLRVLLFA-YRPNPAPLPDGQSEPSLP 445 Query: 207 VYI--AIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL-MRTFVE 263 + E EA I R AGI L ++ G D+P+ +A L + Sbjct: 446 AGLIPMGLIALRDELRPEARETIERFREAGITLK----IISG--DNPDTVAALARQAGFP 499 Query: 264 LRIK 267 I+ Sbjct: 500 AGIR 503 >gi|254473488|ref|ZP_05086885.1| molybdenum cofactor biosynthesis protein A [Pseudovibrio sp. JE062] gi|211957604|gb|EEA92807.1| molybdenum cofactor biosynthesis protein A [Pseudovibrio sp. JE062] Length = 344 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + C + C +C M K VLS ++ + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDLRCVYCMSEHMTFLPKKDVLSLEELDRLCTVFIE-KGVRKIRLTGGEPLV 85 >gi|330813325|ref|YP_004357564.1| tRNA-i(6)A37 methylthiotransferase [Candidatus Pelagibacter sp. IMCC9063] gi|327486420|gb|AEA80825.1| tRNA-i(6)A37 methylthiotransferase [Candidatus Pelagibacter sp. IMCC9063] Length = 437 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 13/107 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGGD--P 154 + + C +C+FC V S+ + +Q + E+I G + Sbjct: 153 ITIQEGCDKFCKFC-----VVPYTRGPEFSRCPDQIYNEVQGLVDAGTREIILLGQNVSG 207 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 L +++ + IK ++ +RF + P + +LI K Sbjct: 208 YKNKDINLSRLIDKVASIKKLERIRFTTSHPND----FDEDLINAFK 250 >gi|315224540|ref|ZP_07866367.1| carbamoyl-phosphate synthase, small subunit [Capnocytophaga ochracea F0287] gi|314945561|gb|EFS97583.1| carbamoyl-phosphate synthase, small subunit [Capnocytophaga ochracea F0287] Length = 366 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 7/61 (11%) Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 DT A ++YI++ + VI T D L + L I +++ L S+V + +P Sbjct: 118 DTRALVSYIRDNGSMNAVISTETD-------DLALLKTRLNEIPNMKGLELASKVSVTEP 170 Query: 190 Q 190 Sbjct: 171 Y 171 >gi|291534395|emb|CBL07507.1| DNA repair photolyase [Roseburia intestinalis M50/1] Length = 288 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 35/194 (18%), Positives = 71/194 (36%), Gaps = 36/194 (18%) Query: 99 LKLLHVCPVYCRFCFRR-------EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 + + C C +C R + + + E AL ++ +I TG Sbjct: 16 INIYRGCSHGCIYCDSRSRCYGFTHAFEDIEVKENAPELLEKALRSKRQ----KCMIGTG 71 Query: 152 G--DPLILSHKRLQKVLKT--LRYIKHVQI-LRFHSRVPIVDPQRI--NPELIQCLKEAG 204 DP + +RL +L L I + + ++ RI + +L+ + E Sbjct: 72 AMCDPYLHVEERL--LLTRRCLELIDRYEFGVAVQTKS-----ARILRDFDLLTSINEKA 124 Query: 205 KPVYIAIHANHPYEF----------SEEAIAAISRLANAGII-LLSQSVLLKGINDDPEI 253 K + + + ++E I + + AGI ++ + +L IND + Sbjct: 125 KAIVQITLTTYDEDLCKKIEPDVSTTKERIDVLMKCKEAGIPTVVWLTPILPFINDTADN 184 Query: 254 LANLMRTFVELRIK 267 + NL+ V+ +K Sbjct: 185 IKNLLDACVDAGVK 198 >gi|317131836|ref|YP_004091150.1| molybdenum cofactor biosynthesis protein A [Ethanoligenens harbinense YUAN-3] gi|315469815|gb|ADU26419.1| molybdenum cofactor biosynthesis protein A [Ethanoligenens harbinense YUAN-3] Length = 324 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 42/186 (22%), Positives = 77/186 (41%), Gaps = 28/186 (15%) Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIW 145 + + R D + + + C + CR+C + + L ++ +A ++ I Sbjct: 2 ENMEKRVVDYLRVSITDRCNLRCRYCMPDKGISLVPHSETLRYEELLRVVA-CAARAGIQ 60 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 ++ TGG+PL+ L L+ LR IK ++ + + + PQ P+L Q EA Sbjct: 61 KIKVTGGEPLV-RRGVLG-FLEKLRGIKGIRQVTMTTNGIL-LPQ-FLPQLAQIGVEA-V 115 Query: 206 PVYIAIHANHPYEFSEEAIAAISR---LANA----------GIILLSQSVLLKGIN-DDP 251 V + + E AI+R LA+ G+ + +V + G+N D+ Sbjct: 116 NVSLDT-------LNPETFRAITRRDGLADVLRGIDAALTLGLRIKINAVPIAGLNEDEL 168 Query: 252 EILANL 257 LA L Sbjct: 169 PALAEL 174 >gi|260888225|ref|ZP_05899488.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Selenomonas sputigena ATCC 35185] gi|260862059|gb|EEX76559.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Selenomonas sputigena ATCC 35185] Length = 412 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 27/120 (22%), Positives = 43/120 (35%), Gaps = 17/120 (14%) Query: 72 EEREDPIG--DNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK 129 + D + + PL G R R LK+ C +C FC G + +L S Sbjct: 100 DGTGDIMHASEFEDIPLFGAPAR--TRAFLKIEEGCENFCSFCIIPYARGPVRSRLLKSV 157 Query: 130 DTEAALAYIQEKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 EAA + E++ T G D L L ++ + + ++ LR S Sbjct: 158 RREAA-KLLAM--GFKEIVLTGIHLGCYGRD---LGDVTLADAVRAVLSLPGLKRLRLGS 211 >gi|256819120|ref|YP_003140399.1| carbamoyl phosphate synthase small subunit [Capnocytophaga ochracea DSM 7271] gi|256580703|gb|ACU91838.1| carbamoyl-phosphate synthase, small subunit [Capnocytophaga ochracea DSM 7271] Length = 366 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 7/61 (11%) Query: 130 DTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP 189 DT A ++YI++ + VI T D L + L I +++ L S+V + +P Sbjct: 118 DTRALVSYIRDNGSMNAVISTETD-------DLALLKARLNEIPNMKGLELASKVSVTEP 170 Query: 190 Q 190 Sbjct: 171 Y 171 >gi|114321504|ref|YP_743187.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola ehrlichii MLHE-1] gi|114227898|gb|ABI57697.1| coproporphyrinogen III oxidase, anaerobic [Alkalilimnicola ehrlichii MLHE-1] Length = 466 Score = 37.0 bits (85), Expect = 4.0, Method: Composition-based stats. Identities = 28/152 (18%), Positives = 54/152 (35%), Gaps = 16/152 (10%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSS-KDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L + C C FC + VG ++ + + L +I E + + + GG P Sbjct: 65 LYAHVPFCNYACSFCCYAKKVGVEREQMARYVATLKRELEWIPEGTPVNQFFIGGGTPTA 124 Query: 157 LSHKRLQKVLKTLR-YIK-HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L L ++L + + H + H+ P+ I+ + L+ G + Sbjct: 125 LPADLLDELLGAIAGRMPYHGDPV--HT--VEASPESISDAHLAVLQRHGVRRVSMGVQS 180 Query: 215 HPYEFSEEAIAA---------ISRLANAGIIL 237 E + + R+ +AG+IL Sbjct: 181 LDDEVLDSVRRSHGPDLALETCRRIIDAGLIL 212 >gi|302337649|ref|YP_003802855.1| radical SAM protein [Spirochaeta smaragdinae DSM 11293] gi|301634834|gb|ADK80261.1| Radical SAM domain protein [Spirochaeta smaragdinae DSM 11293] Length = 424 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 19/85 (22%), Positives = 30/85 (35%), Gaps = 5/85 (5%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----VIFT 150 R + + C C FC +K + + I + + F Sbjct: 49 RCIYIHIPYCDTICEFCNLNRTARGHTDLDAYTKYLIKEIEWYARYPYIRDGQFDAIYFG 108 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHV 175 GG P IL ++L VL+ LR H+ Sbjct: 109 GGTPTILQTEQLSLVLRALRDSFHL 133 >gi|198282884|ref|YP_002219205.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Acidithiobacillus ferrooxidans ATCC 53993] gi|218665819|ref|YP_002425085.1| tRNA-i(6)A37 modification enzyme MiaB [Acidithiobacillus ferrooxidans ATCC 23270] gi|229890414|sp|B7J5B2|MIAB_ACIF2 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|229890415|sp|B5ENG4|MIAB_ACIF5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|198247405|gb|ACH82998.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Acidithiobacillus ferrooxidans ATCC 53993] gi|218518032|gb|ACK78618.1| tRNA-i(6)A37 modification enzyme MiaB [Acidithiobacillus ferrooxidans ATCC 23270] Length = 451 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 14/111 (12%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP- 154 + + C +C FC G + S D + + E+ + E+ G + Sbjct: 148 TAFVTIQEGCDKFCTFCVVPHTRGRE--YSRSMPDILREVRALVEQ-GVREITLLGQNVN 204 Query: 155 ------LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 ++ L +L+ L I + LR+ + P + ELI Sbjct: 205 AYRGATGLVGEGGLADLLERLARIPGLLRLRYTTSHPANL----DDELIAA 251 >gi|197287367|ref|YP_002153239.1| radical SAM superfamily protein [Proteus mirabilis HI4320] gi|194684854|emb|CAR46981.1| radical SAM superfamily protein [Proteus mirabilis HI4320] Length = 369 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 39/105 (37%), Gaps = 15/105 (14%) Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 ++S ++ I+ R + L + C C+FC S + AL I Sbjct: 77 SNSRIRVILSRKANHNTLLVTERCNNLCQFC------SQPPKNRDDSWLLDDALLAIAAF 130 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + + +GG+PL+ +K + + + I R R + Sbjct: 131 NFDGVIGISGGEPLLYGNKFIDFIRE---------IKRLAPRTVL 166 >gi|127514323|ref|YP_001095520.1| radical SAM domain-containing protein [Shewanella loihica PV-4] gi|126639618|gb|ABO25261.1| Radical SAM domain protein [Shewanella loihica PV-4] Length = 292 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 58/166 (34%), Gaps = 33/166 (19%) Query: 97 ILLKLLHVCP-VYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIFTG 151 ++L++ + C C FC +M + + + K + IQ I V Sbjct: 18 LILQVTNGCSWNRCHFC---DMYTAPQKQFRAQK-IDKIAEDIQRVAQRNLSISRVFLAD 73 Query: 152 GDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIV-DPQRI---NPELIQCLKEAGKP 206 GD + L RL+ + +R + V +R+ P+ + + L+E G Sbjct: 74 GDAMSLPFNRLEAICLLIREHLPQV------TRISSYCLPRNLNNKTDAQLARLRELGLS 127 Query: 207 VYIAIHANHPYEFSEEAIA---------AISRLANAG----IILLS 239 + + E A+ R+ AG +++L+ Sbjct: 128 LLYVGCESGDDEVLARIEKGETFDSSLLALQRIRAAGMKSSVMILN 173 >gi|294673365|ref|YP_003573981.1| oxygen-independent coproporphyrinogen III oxidase [Prevotella ruminicola 23] gi|294473953|gb|ADE83342.1| putative oxygen-independent coproporphyrinogen III oxidase [Prevotella ruminicola 23] Length = 375 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 27/161 (16%), Positives = 53/161 (32%), Gaps = 31/161 (19%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----------QIWEV 147 L + C C +C S G L + +A I+ +S + + Sbjct: 4 LYVHIPFCSSRCVYCG----FYSTTGLALRERYVDALCQEIKMRSLPTNPPQKEGSLGTI 59 Query: 148 IFTGGDPLILSHKRLQKVLKTLR---YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 GG P L+ +L+++ + +++ + V+P + PEL L++ Sbjct: 60 YLGGGTPSQLTIPQLRRIFDAIYIYNKVENDAEVTIE-----VNPDDVTPELAAALQQLP 114 Query: 205 KPVYIA---------IHANHPYEFSEEAIAAISRLANAGII 236 +H S + A++ L AG Sbjct: 115 INRVSMGAQTFNDERLHFLRRRHSSAQVHQAVATLRQAGFQ 155 >gi|282165127|ref|YP_003357512.1| FO synthase subunit 2 [Methanocella paludicola SANAE] gi|282157441|dbj|BAI62529.1| FO synthase subunit 2 [Methanocella paludicola SANAE] Length = 355 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 10/81 (12%) Query: 102 LHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 +C CRFC FR L K A AY EV GG +LS Sbjct: 57 TDICIGTCRFCAFRNRENYRLTDEQLLKK-VGEAKAY-----GATEVCIQGG---LLSDM 107 Query: 161 RLQKVLKTLRYIKHVQILRFH 181 L+ + L+ IK + H Sbjct: 108 YLKDYVAMLKSIKGKYDIDIH 128 >gi|259090313|pdb|3IIZ|A Chain A, X-Ray Structure Of The Fefe-Hydrogenase Maturase Hyde From T. Maritima In Complex With S-Adenosyl-L-Methionine Length = 348 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 14/89 (15%), Positives = 35/89 (39%), Gaps = 6/89 (6%) Query: 89 IVHRYPD-----RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 I +Y R +++ +VC C +C R + K ++ ++ + Sbjct: 42 IRRKYVGDEVHIRAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGA 101 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 V+ +G DP + + ++K ++ + Sbjct: 102 KTIVLQSGEDPYXMPD-VISDIVKEIKKM 129 >gi|238753337|ref|ZP_04614700.1| Molybdenum cofactor biosynthesis protein A [Yersinia ruckeri ATCC 29473] gi|238708290|gb|EEQ00645.1| Molybdenum cofactor biosynthesis protein A [Yersinia ruckeri ATCC 29473] Length = 327 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 27/163 (16%), Positives = 59/163 (36%), Gaps = 21/163 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + VC C +C + + L+ + ++ TGG+P + Sbjct: 18 LSITDVCNFRCTYCLPDGYQPNGVKSFLTLDEIRRVGRAFAALGT-EKIRLTGGEPSMRR 76 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH--P 216 ++ LR ++ L + R++ +++Q ++AG + I + P Sbjct: 77 D--FPDIIAALRENPAIRTL-----AVTTNGYRLSRDVVQW-RDAGLT-ALNISVDSLDP 127 Query: 217 YEFSE--------EAIAAISRLANAGII-LLSQSVLLKGINDD 250 +F + + I AG + +VL++ +ND Sbjct: 128 RQFHAITGQDKFHQVMQGIDAAFEAGFEKIKINAVLMREVNDR 170 >gi|115372357|ref|ZP_01459666.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1] gi|115370570|gb|EAU69496.1| conserved hypothetical protein [Stigmatella aurantiaca DW4/3-1] Length = 469 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 29/150 (19%) Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ IP + ++ RE+ + Y LK+ C C FC + Sbjct: 124 RQVIPDPDYIHNAETPRENSMPS------------Y--TAYLKVSEGCDNACAFCIIPTL 169 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL------SHKRLQKVLKTLRY 171 G Q+ ++ D A + + E+ D L +L +LK L Sbjct: 170 RGGQRSRPIA--DIIAEATRL-ADQGVQELNLVAQD-LTAYGHDLPGKPKLHDLLKELVK 225 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + V+ +R H P + P ELI+ + Sbjct: 226 VD-VRWIRLHYAYPRIFP----DELIEVMA 250 >gi|189500325|ref|YP_001959795.1| Radical SAM domain-containing protein [Chlorobium phaeobacteroides BS1] gi|189495766|gb|ACE04314.1| Radical SAM domain protein [Chlorobium phaeobacteroides BS1] Length = 417 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 3/64 (4%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 D +L L C + C C G + T L + + ++ V FTGG+P Sbjct: 60 DTAILCLTEQCNLNCIHCSVNASPGGK--THLDPGVLRRCIEELCS-LEVRVVKFTGGEP 116 Query: 155 LILS 158 L Sbjct: 117 LTYP 120 >gi|310819551|ref|YP_003951909.1| MiaB-like tRNA modifying enzyme YliG [Stigmatella aurantiaca DW4/3-1] gi|309392623|gb|ADO70082.1| MiaB-like tRNA modifying enzyme YliG [Stigmatella aurantiaca DW4/3-1] Length = 459 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 32/150 (21%), Positives = 53/150 (35%), Gaps = 29/150 (19%) Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 RQ IP + ++ RE+ + Y LK+ C C FC + Sbjct: 114 RQVIPDPDYIHNAETPRENSMPS------------Y--TAYLKVSEGCDNACAFCIIPTL 159 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL------SHKRLQKVLKTLRY 171 G Q+ ++ D A + + E+ D L +L +LK L Sbjct: 160 RGGQRSRPIA--DIIAEATRL-ADQGVQELNLVAQD-LTAYGHDLPGKPKLHDLLKELVK 215 Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLK 201 + V+ +R H P + P ELI+ + Sbjct: 216 VD-VRWIRLHYAYPRIFP----DELIEVMA 240 >gi|218264310|ref|ZP_03478167.1| hypothetical protein PRABACTJOHN_03858 [Parabacteroides johnsonii DSM 18315] gi|218222111|gb|EEC94761.1| hypothetical protein PRABACTJOHN_03858 [Parabacteroides johnsonii DSM 18315] Length = 440 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 26/123 (21%), Positives = 45/123 (36%), Gaps = 11/123 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C +C G + ++S K E A S E++ TG Sbjct: 149 RTRHFLKVQDGCDYFCSYCTIPFARGRSRNGTIASMVKQAEEVAA-----SGGKEIVLTG 203 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + + + +R + V+ I+R+ R+ ++P I E I K Sbjct: 204 VNIGDFGKSTGETFIDLIRALDEVEGIVRY--RISSIEPNLITDEAID-FVAHSKHFAPH 260 Query: 211 IHA 213 H Sbjct: 261 FHI 263 >gi|220917205|ref|YP_002492509.1| lipoic acid synthetase [Anaeromyxobacter dehalogenans 2CP-1] gi|219955059|gb|ACL65443.1| lipoic acid synthetase [Anaeromyxobacter dehalogenans 2CP-1] Length = 326 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 30/185 (16%), Positives = 63/185 (34%), Gaps = 30/185 (16%) Query: 98 LLKLLHVCPVYCRFCFRR-----EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 ++ + VC CRFC + + + L+ E AL YI S + + GG Sbjct: 86 VMLMGDVCTRGCRFCNVKTAAHPPALDPDEPRHLAEAIAELALDYIVVTSVDRDDLPDGG 145 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ-RINPELIQCLKEAGKPVYIAI 211 ++ L+ I V ++ P R +PE ++ + A V+ Sbjct: 146 ------AAHFADAIRRLKEIP-------GLLVEVLTPDFRGDPEAVRTVGRAAPDVFANN 192 Query: 212 HANHPYEFSEEAIAA----------ISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 + A +++L ++++S ++ G+ + + MR Sbjct: 193 -LETVRRLTPAVRDAKATYDQTLGVLAQLKREFPQVVTKSSIMVGLGEQEAEVVEAMRDL 251 Query: 262 VELRI 266 + Sbjct: 252 RAHGV 256 >gi|148270626|ref|YP_001245086.1| biotin synthase [Thermotoga petrophila RKU-1] gi|147736170|gb|ABQ47510.1| biotin synthase [Thermotoga petrophila RKU-1] Length = 348 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 11/77 (14%), Positives = 33/77 (42%), Gaps = 1/77 (1%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R +++ +VC C +C R + K ++ ++ + V+ +G DP Sbjct: 54 RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY 113 Query: 156 ILSHKRLQKVLKTLRYI 172 + + + +++ ++ + Sbjct: 114 YMPN-VISDIVREIKKM 129 >gi|110834795|ref|YP_693654.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Alcanivorax borkumensis SK2] gi|123345402|sp|Q0VN66|MIAB_ALCBS RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|110647906|emb|CAL17382.1| conserved hypothetical protein [Alcanivorax borkumensis SK2] Length = 445 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 23/126 (18%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF----- 149 + ++ C YC FC V S+ + L IQ + EV Sbjct: 149 AFVSIMEGCSKYCTFC-----VVPYTRGEEVSRPVQPVLKEIQHLADMGVREVNLLGQNV 203 Query: 150 -----TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLK 201 G D L L +++ +R I + +R+ + P+ + ++ ++ + + Sbjct: 204 NAYQGVGADGDTLD---LADLIRLIRDIDGIDRIRYTTSHPVEFSEALIQVYEDVPELVS 260 Query: 202 EAGKPV 207 PV Sbjct: 261 HLHLPV 266 >gi|86742173|ref|YP_482573.1| molybdenum cofactor biosynthesis protein A [Frankia sp. CcI3] gi|86569035|gb|ABD12844.1| GTP cyclohydrolase subunit MoaA [Frankia sp. CcI3] Length = 328 Score = 37.0 bits (85), Expect = 4.1, Method: Composition-based stats. Identities = 49/245 (20%), Positives = 90/245 (36%), Gaps = 39/245 (15%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C E + +L+ + + + + EV TGG+P++ Sbjct: 16 VSLTDRCNLRCTYCMPAEGLAWLPGERMLTDDEVVRLVGVAVGRLGVTEVRLTGGEPML- 74 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHP 216 L +++ L LR + + I L L+ AG + +++ Sbjct: 75 -RPGLVELVARLAA------LRPRPELSVTTNGLILARLAGPLRAAGLDRINVSLDTLDA 127 Query: 217 YEFSEEAIAAISRLANA-----------GIILLSQSVLLKGINDD--PEILANLMRTFVE 263 F RL + + SVL++G+NDD P +L +R E Sbjct: 128 DRFVRITRR--ERLGDVLAGLSAAAASGFTPVKVNSVLVRGVNDDEAPRLLRWCLREGYE 185 Query: 264 LRIKPYYLHHPDLAAGTSH--FRLTIEEGQKIVASLKEK-----ISGL-CQPFYILDLPG 315 LR + H R T+ +I+A L+ + + G P + ++ G Sbjct: 186 LR------FIEQMPLDAQHAWRRDTMVTAGEILACLRAEFTLTPLPGRGSAPAELFEVNG 239 Query: 316 GYGKV 320 G G+V Sbjct: 240 GPGRV 244 >gi|327309983|ref|YP_004336880.1| Radical SAM domain-containing protein [Thermoproteus uzoniensis 768-20] gi|326946462|gb|AEA11568.1| Radical SAM domain protein [Thermoproteus uzoniensis 768-20] Length = 291 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 28/172 (16%), Positives = 54/172 (31%), Gaps = 24/172 (13%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT-GGDPLIL 157 L C C +C+ + E +++ + + DP Sbjct: 23 LNPYTGCGHSCAYCYISGYIPRAFQPRPKEDLLERVRRDVKKLPPGSVISLSNSSDPYTP 82 Query: 158 SHKRLQ---KVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 L+ + L + H ++L ++ P+V + L + + I Sbjct: 83 PEAELRLTRRALSLILEAGH-KVL-IVTKSPLVL------RDLDILSKYPGRAVVQITVT 134 Query: 215 HPYE-----FSEEA------IAAISRLANAGIILLSQS-VLLKGINDDPEIL 254 E A + A R+A AGI + + ++ +ND PE L Sbjct: 135 TLDERIAERLEPRAPRPSARLEAARRIAEAGIPVGVRLDPIVPYVNDSPESL 186 >gi|325967847|ref|YP_004244039.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28] gi|323707050|gb|ADY00537.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28] Length = 385 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 19/92 (20%), Positives = 40/92 (43%), Gaps = 3/92 (3%) Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 +++ L + + + + + L H C + CR C+ + G LS D L ++ Sbjct: 28 EDNNELPYLSMNFINDVTIYLTHACNLECRHCYL--LAGKPLSNELSIDDWLLILDKLR- 84 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 V GG+P++L + L K++ + + Sbjct: 85 DLGAKYVYLLGGEPMLLIRRGLLKIISHAKDL 116 >gi|164687526|ref|ZP_02211554.1| hypothetical protein CLOBAR_01167 [Clostridium bartlettii DSM 16795] gi|164603300|gb|EDQ96765.1| hypothetical protein CLOBAR_01167 [Clostridium bartlettii DSM 16795] Length = 449 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF + +++ + +AA+ Y+ S E+ F GG+PL Sbjct: 90 LHVSHDCNLRCKYCFASQGDFGGAKEIMNFEVGKAAIDYLIANSGNRRNLEIDFFGGEPL 149 Query: 156 I 156 + Sbjct: 150 M 150 >gi|15451307|dbj|BAB64457.1| hypothetical protein [Macaca fascicularis] Length = 877 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 22/191 (11%) Query: 115 REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLR-YIK 173 + V + + + Y+ + E + + K+L +LK L Sbjct: 478 KRRVQIHDTRPVKPELALVYIEYLLTHPKNRECLLS------APRKKLNHLLKALETSKA 531 Query: 174 HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANA 233 ++ L + P P+ L+ G ++IH H F E +S L + Sbjct: 532 DLESL---LQAPGGKPRGFGEA--AALRAFGLHCRLSIHLQHK--FCSEGKVYLSILEDT 584 Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPYYLHHPDLAA----GTSHFRLT-IE 288 G L S+ +L I D E L R + +I YL G F++ ++ Sbjct: 585 GFWLESK--ILSFIQDQEEDYLKLHRVIYQ-QIIQTYLTVCKDVVMVGLGDHQFQMQLLQ 641 Query: 289 EGQKIVASLKE 299 I+ ++K Sbjct: 642 RSLGIMQTVKG 652 >gi|16082543|ref|NP_394103.1| coenzyme PQQ synthesis protein E [Thermoplasma acidophilum DSM 1728] Length = 368 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 38/187 (20%), Positives = 73/187 (39%), Gaps = 28/187 (14%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----VI 148 P I + C + C C ++ + + ++ ++ + + VI Sbjct: 8 KPLLIFWETTKACGLKCEHCRASAIL----DALPGEMTFDQSINFLSHIKEFGKPYPIVI 63 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 TGGD +L R+ ++ LR Q + F S P V + E I KE G Sbjct: 64 LTGGD--MLRKHRIWDIMDYLRS----QEIPF-SVSPAVT-DLLTHEAILKFKEFGVS-S 114 Query: 209 IAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLK-GINDDPEILANL 257 ++I + E E+ AI L + GI + +V+++ ++D P +L + Sbjct: 115 VSISLDGMREVHEKVRGVAGVYDDTVKAIEDLISTGISMQINTVVMRSTVHDLPHVLKLI 174 Query: 258 MRTFVEL 264 + V++ Sbjct: 175 IDKGVKV 181 >gi|62184869|ref|YP_219654.1| hypothetical protein CAB227 [Chlamydophila abortus S26/3] gi|62147936|emb|CAH63683.1| conserved hypothetical protein [Chlamydophila abortus S26/3] Length = 370 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 19/93 (20%), Positives = 25/93 (26%), Gaps = 11/93 (11%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y L + C C FC G KG + + + I E GG Sbjct: 66 YSSTFYLYPTNFCEFNCTFCAFYAKPGDPKGWFHTPDQLIEKIQEL--DVPITETHIVGG 123 Query: 153 DPLILSHKRLQKVLKTLRYIK------HVQILR 179 L + IK HV+ L Sbjct: 124 ---CFPDCDLDYYTELFSKIKAHFPHLHVKALT 153 >gi|228912462|ref|ZP_04076141.1| Radical SAM domain protein [Bacillus thuringiensis IBL 200] gi|228847177|gb|EEM92152.1| Radical SAM domain protein [Bacillus thuringiensis IBL 200] Length = 468 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 7/114 (6%) Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVH-RYPDRILLKLLHVCPVYCRFCFRRE 116 R+ I EEL + D D + I Y + L + H C + C +CF + Sbjct: 63 RETIADIEELKRDGKLFTD--DDYKDLSIDLINRPTYVKALCLNVAHTCNLSCEYCFASQ 120 Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLK 167 + ++S + + A+ ++ E S +V F GG+PL+ K +++++ Sbjct: 121 GKYNGNRAIMSYEVGKRAIDFLLENSGNHRNLDVDFFGGEPLMA-WKTVKQIVA 173 >gi|167630037|ref|YP_001680536.1| elongator protein 3/miab/nifb, putative [Heliobacterium modesticaldum Ice1] gi|167592777|gb|ABZ84525.1| elongator protein 3/miab/nifb, putative [Heliobacterium modesticaldum Ice1] Length = 393 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 38/117 (32%), Gaps = 21/117 (17%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y + + C ++C C+ G + + + + ++ +GG Sbjct: 35 YGPVVAWNVSRTCNLHCIHCYSDSDEIEYPGELTTKEAIRFIDD--LADFNVPVLLLSGG 92 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRF-----HSRVPIVDPQRINPELIQCLKEAG 204 +PL+ + L + +R + I P++ + +K+ G Sbjct: 93 EPLMRPD------IFDLVAHATKRNIRVTFSTNGT--------LITPDVAKEIKKYG 135 >gi|148241697|ref|YP_001226854.1| oxygen independent coproporphyrinogen III oxidase [Synechococcus sp. RCC307] gi|147850007|emb|CAK27501.1| Oxygen independent coproporphyrinogen III oxidase [Synechococcus sp. RCC307] Length = 410 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 31/90 (34%), Gaps = 13/90 (14%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ----------EK 141 R P R L + C C +C + G +++ Y+ Sbjct: 7 RRPPRSLYLHIPFCHRRCFYC---DFPVVPLGDQADGSRSQSIADYLHWLLRDLAAAPAG 63 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 + V GG P +LS +L ++L +R Sbjct: 64 PPLSTVYIGGGTPSMLSPDQLAQLLAAVRS 93 >gi|146282425|ref|YP_001172578.1| pyrroloquinoline quinone biosynthesis protein PqqE [Pseudomonas stutzeri A1501] gi|145570630|gb|ABP79736.1| coenzyme PQQ synthesis protein E [Pseudomonas stutzeri A1501] Length = 381 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 35/76 (46%), Gaps = 3/76 (3%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +LL+L + CP+ C FC + LS+ + +A + + ++ F+GG+P + Sbjct: 19 LLLELTYQCPLQCVFCSNPRNFADYRPDELSTAEWIDVMAQARAMGAV-QIGFSGGEPTL 77 Query: 157 LSHKRLQKVLKTLRYI 172 L+ ++ + Sbjct: 78 RKD--LETLVAEADRM 91 >gi|325264391|ref|ZP_08131122.1| putative pyruvate formate-lyase activating enzyme [Clostridium sp. D5] gi|324030462|gb|EGB91746.1| putative pyruvate formate-lyase activating enzyme [Clostridium sp. D5] Length = 304 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 8/36 (22%), Positives = 19/36 (52%), Gaps = 2/36 (5%) Query: 234 GIILLSQSVLLKGINDDPEILANLMRTFVELRIKPY 269 GI + + L+ G+ND + + +++ + I+ Y Sbjct: 216 GIFVR--TPLVPGVNDSEQDILDMIEALQKNGIRNY 249 >gi|178847575|pdb|3CIW|A Chain A, X-Ray Structure Of The [fefe]-Hydrogenase Maturase Hyde From Thermotoga Maritima gi|259090312|pdb|3IIX|A Chain A, X-Ray Structure Of The Fefe-Hydrogenase Maturase Hyde From T. Maritima In Complex With Methionine And 5'deoxyadenosine Length = 348 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 1/77 (1%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R +++ +VC C +C R + K ++ ++ + V+ +G DP Sbjct: 54 RAIIEFSNVCRKNCLYCGLRRDNKNLKRYRMTPEEIVERARLAVQFGAKTIVLQSGEDPY 113 Query: 156 ILSHKRLQKVLKTLRYI 172 + + ++K ++ + Sbjct: 114 XMPD-VISDIVKEIKKM 129 >gi|138894071|ref|YP_001124524.1| thioredoxin-like oxidoreductase [Geobacillus thermodenitrificans NG80-2] gi|196250260|ref|ZP_03148953.1| YfkB-like domain protein [Geobacillus sp. G11MC16] gi|134265584|gb|ABO65779.1| Thioredoxin-like oxidoreductase [Geobacillus thermodenitrificans NG80-2] gi|196210149|gb|EDY04915.1| YfkB-like domain protein [Geobacillus sp. G11MC16] Length = 374 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 15/81 (18%), Positives = 34/81 (41%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L +C + C C + ++ L + + ++E + + TGG+P +LS Sbjct: 35 LTTTTLCNMRCEHCAVGYTLATKDPDALP---LDLLIRRLEEIPHLRSLSITGGEP-MLS 90 Query: 159 HKRLQKVLKTLRYIKHVQILR 179 +++ + L H + +R Sbjct: 91 LTSVERYVVPLLRYAHERGVR 111 >gi|124485405|ref|YP_001030021.1| hypothetical protein Mlab_0580 [Methanocorpusculum labreanum Z] gi|124362946|gb|ABN06754.1| MiaB-like tRNA modifying enzyme [Methanocorpusculum labreanum Z] Length = 416 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 44/125 (35%), Gaps = 17/125 (13%) Query: 97 ILLKLLHVCPVYCRFC-FRREM-----VGSQKGTVLSSKDTEAALAYIQEKSQIWEVI-F 149 +L++ C +C +C R ++ + EA IQ +Q Sbjct: 127 AVLQIARGCNGHCTYCITRLARGKLVSFSAEDIVRQAKSIVEAGATEIQLTAQDTSSWGL 186 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP-IVDPQRINPELIQCLKEAGKPVY 208 D L L +L+ L I ++R P + P I + + LK+ ++ Sbjct: 187 DRNDGLRLPD-----LLRQLCAIPGNFMIRIGMANPDTLLP--ILDDFLDALKDP--KIF 237 Query: 209 IAIHA 213 + +H Sbjct: 238 LFLHI 242 >gi|121607765|ref|YP_995572.1| molybdenum cofactor biosynthesis protein A [Verminephrobacter eiseniae EF01-2] gi|121552405|gb|ABM56554.1| GTP cyclohydrolase subunit MoaA [Verminephrobacter eiseniae EF01-2] Length = 384 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFC-----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C F + G +L ++ + ++ TGG+ Sbjct: 44 ISVTDRCNFRCNYCMPKEVFDKNYPYLPHGALLRFEEIARLARLFLAH-GVRKIRLTGGE 102 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K L ++ L + Sbjct: 103 PLL--RKNLPALVAQLAAL 119 >gi|78043460|ref|YP_359414.1| radical SAM domain-containing protein [Carboxydothermus hydrogenoformans Z-2901] gi|77995575|gb|ABB14474.1| radical SAM domain protein [Carboxydothermus hydrogenoformans Z-2901] Length = 452 Score = 37.0 bits (85), Expect = 4.2, Method: Composition-based stats. Identities = 15/69 (21%), Positives = 31/69 (44%), Gaps = 6/69 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK----SQIWEVIF 149 P +I + C + C +CF++ + K + + + +A Y+ + + + Sbjct: 88 PTQIFFVPTYNCNLACSYCFQQGI--KDKKDLPTKEVLDAFFNYVNQNFKNEPEKPFLTL 145 Query: 150 TGGDPLILS 158 GG+PLI S Sbjct: 146 FGGEPLIAS 154 >gi|303247563|ref|ZP_07333834.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ] gi|302491043|gb|EFL50937.1| Radical SAM domain protein [Desulfovibrio fructosovorans JJ] Length = 364 Score = 37.0 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 4/84 (4%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 Y + + +VC CRFC ++ G+ LS D A LA +E + I E+ GG Sbjct: 61 YVHNVHINFTNVCVNACRFCAFFKVKGAAGARTLSVDDIVAELAA-RENAPIREIHVVGG 119 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQ 176 + L + LR I V+ Sbjct: 120 ---LNPDLPLSYYVDMLRAISRVR 140 >gi|262377253|ref|ZP_06070477.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter lwoffii SH145] gi|262307706|gb|EEY88845.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Acinetobacter lwoffii SH145] Length = 485 Score = 37.0 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 27/144 (18%), Positives = 55/144 (38%), Gaps = 22/144 (15%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTG-- 151 + + ++ C YC FC V S+ + LA I + + E+ G Sbjct: 185 KAFVSIMEGCSKYCSFC-----VVPYTRGEEVSRPLDDVLAEIAGLAEKGVREISLLGQN 239 Query: 152 -----GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 G+ + +L+ + I + +R+ + P+ N +LIQC ++ + Sbjct: 240 VNGYRGETFEGNICTFADLLRLVADIPGIGRIRYTTSHPL----EFNDDLIQCYRDLPQ- 294 Query: 207 VYIAIHANHP-YEFSEEAIAAISR 229 + H + P S + + A+ R Sbjct: 295 --MVSHLHLPVQSGSNDVLQAMKR 316 >gi|229815230|ref|ZP_04445566.1| hypothetical protein COLINT_02276 [Collinsella intestinalis DSM 13280] gi|229809240|gb|EEP45006.1| hypothetical protein COLINT_02276 [Collinsella intestinalis DSM 13280] Length = 427 Score = 37.0 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 18/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R+ +K+ C C +C + G ++ ++S + A E++ I EV+ TG Sbjct: 133 RSRLGVKVQDGCNNRCSYCIVWKARGPERSVPVASVLEQVRRA-----ERAGIPEVVLTG 187 Query: 152 G-----DPLILSHK--RLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 D + S + ++L + ++ +R S ++P ++ LI + G Sbjct: 188 VNLGAYDGVDASDSHVEIDELLDIILEQTNIPQVRLSS----LEPMDVHDRLIDAMVAGG 243 Query: 205 KPVYIAIH 212 + V +H Sbjct: 244 ERVAPFLH 251 >gi|237716499|ref|ZP_04546980.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262408097|ref|ZP_06084645.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22] gi|294645091|ref|ZP_06722817.1| MiaB-like protein [Bacteroides ovatus SD CC 2a] gi|294809491|ref|ZP_06768194.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b] gi|229444146|gb|EEO49937.1| conserved hypothetical protein [Bacteroides sp. D1] gi|262354905|gb|EEZ03997.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Bacteroides sp. 2_1_22] gi|292639597|gb|EFF57889.1| MiaB-like protein [Bacteroides ovatus SD CC 2a] gi|294443309|gb|EFG12073.1| MiaB-like protein [Bacteroides xylanisolvens SD CC 1b] Length = 436 Score = 37.0 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 18/113 (15%), Positives = 41/113 (36%), Gaps = 14/113 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G + ++ + Y+ + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--RHISKPMEEILDEVRYLVSQGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + L ++++ + I V+ +R H P +L + ++E Sbjct: 196 GID--RYKKQMLPELIERISDIPGVEWIRLH----YAYPAHFPTDLFRVMRER 242 >gi|206969427|ref|ZP_03230381.1| RNA modification enzyme, MiaB family [Bacillus cereus AH1134] gi|229180587|ref|ZP_04307929.1| hypothetical protein bcere0005_39320 [Bacillus cereus 172560W] gi|229192521|ref|ZP_04319483.1| hypothetical protein bcere0002_41730 [Bacillus cereus ATCC 10876] gi|206735115|gb|EDZ52283.1| RNA modification enzyme, MiaB family [Bacillus cereus AH1134] gi|228590945|gb|EEK48802.1| hypothetical protein bcere0002_41730 [Bacillus cereus ATCC 10876] gi|228603011|gb|EEK60490.1| hypothetical protein bcere0005_39320 [Bacillus cereus 172560W] Length = 450 Score = 37.0 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 19/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C FC G + + + + A + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDGKEVIKQAQQLVDA--GYKEIVLTGIH 198 Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + L +L+ + + ++ LR S ++ +I+ E+I+ L ++ Sbjct: 199 TGGYGED---IKDYNLAGLLRDMEAEVDGLKRLRISS----IEASQISDEVIEVLDKSEV 251 Query: 206 PVYIAIHA 213 V +H Sbjct: 252 -VVRHLHI 258 >gi|54027758|ref|YP_121999.1| hypothetical protein pnf11100 [Nocardia farcinica IFM 10152] gi|54019266|dbj|BAD60635.1| hypothetical protein [Nocardia farcinica IFM 10152] Length = 377 Score = 37.0 bits (85), Expect = 4.3, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 31/98 (31%), Gaps = 10/98 (10%) Query: 99 LKLLHVCPVYCRFCFRREM---VGSQKGTVLSSKDTEAAL-AYIQEKSQIWEVIFTGGDP 154 L++ C C C R T ++ A L ++ + +I ++ GDP Sbjct: 15 LEVSTRCNAECPMCARNLFGATAPGLTETSMTLDQFRACLPEHVLAQLEIVDICGAYGDP 74 Query: 155 LILSHKRLQKVLKTLRYIKHVQILRF----HSRVPIVD 188 I L + + I +R R P Sbjct: 75 AIAP--ELLDICHHIHTINPSTTIRIYSNGGLRTPTWW 110 >gi|328951573|ref|YP_004368908.1| Ribosomal RNA large subunit methyltransferase N [Marinithermus hydrothermalis DSM 14884] gi|328451897|gb|AEB12798.1| Ribosomal RNA large subunit methyltransferase N [Marinithermus hydrothermalis DSM 14884] Length = 353 Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 45/197 (22%), Positives = 74/197 (37%), Gaps = 39/197 (19%) Query: 93 YPDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVI 148 Y DR + + + CP C FC +M + T D A AY Q +I V+ Sbjct: 107 YKDRRTICISSMVGCPAGCTFCATGQMRFGRNLTAPEILDQLLAAAYHQGISPREIRNVV 166 Query: 149 FTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK------ 201 G G+PL+ L VLK +R + H + + P+RI + + Sbjct: 167 LMGMGEPLL----NLTNVLKAVRRM-------IHKQALAMSPRRITLSTVGIPRGIYRLA 215 Query: 202 --EAGKPVYIAIHA---NHPYEFSEEA-IAAISRLANAGIILLSQS--------VLLKGI 247 + G + +++HA A AI + +A ++ LL+G+ Sbjct: 216 EEDVGVKLALSLHAPDDETRRRIIPTAHRYAIEEIMDAVRHYYRRTKRRVTLEYTLLRGV 275 Query: 248 NDD---PEILANLMRTF 261 ND ++LA R Sbjct: 276 NDHLWQAKMLAKHTRGL 292 >gi|297617252|ref|YP_003702411.1| radical SAM protein [Syntrophothermus lipocalidus DSM 12680] gi|297145089|gb|ADI01846.1| Radical SAM domain protein [Syntrophothermus lipocalidus DSM 12680] Length = 293 Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 42/168 (25%), Positives = 62/168 (36%), Gaps = 36/168 (21%) Query: 98 LLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----QIWEVIFTGG 152 +L+ C C FC G K + E A I+ + +V G Sbjct: 19 ILQCTVGCSHNGCTFC------GMYKDKKYRVRSLEEIKADIRMAKLYYGDLQKVFLADG 72 Query: 153 DPLILSHKRLQKVLKTLR----YIKHVQILRFHSRVPIVDPQRI---NPELIQCLKEAGK 205 D L + L ++L L + HV I PQ I E +Q LK+AG Sbjct: 73 DALAMQTDELLEILNYLYRLFPSLYHVGIY--------AGPQSILQKTEEELQMLKQAGL 124 Query: 206 PV-YIAIHANHPY---EFS-----EEAIAAISRLANAGIILLSQSVLL 244 + Y+ I E + EE + A ++ +GI L S +VLL Sbjct: 125 TIAYLGIETGDERLLKEINKGVTYEEMVEAGQKIVRSGIKL-SATVLL 171 >gi|300024986|ref|YP_003757597.1| RNA modification enzyme, MiaB family [Hyphomicrobium denitrificans ATCC 51888] gi|299526807|gb|ADJ25276.1| RNA modification enzyme, MiaB family [Hyphomicrobium denitrificans ATCC 51888] Length = 449 Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 20/96 (20%), Positives = 36/96 (37%), Gaps = 10/96 (10%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-------ALAYIQEKSQIWEVIF 149 L + C +C FC GS+ ++ + EA A + + Sbjct: 157 AFLTIQEGCDKFCTFCVVPYTRGSEYSRSVAKIEAEAHELARAGAKELVLLGQNVNAYHG 216 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 G D S L +++TL I+ V+ +R+ + P Sbjct: 217 EGADGRTAS---LADLIRTLAAIEGVERIRYMTSHP 249 >gi|206601630|gb|EDZ38113.1| Putative radical SAM family protein [Leptospirillum sp. Group II '5-way CG'] Length = 379 Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 50/291 (17%), Positives = 92/291 (31%), Gaps = 60/291 (20%) Query: 94 PDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIF 149 DR L + C + CRFC R +G + +S A + E Sbjct: 101 DDRATLCVSSQVGCGIGCRFC-RTAEMGLIRNLSVSEILGQVRVANRLLAESPVRDMSKE 159 Query: 150 TGGDPLILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQ-------RIN------P 194 T PL+ L + + L H+ S + P+ RI Sbjct: 160 TEPAPLLSRVNHLVFMGMGEPLANFDHLVR----SLAVLTSPEGFGLSSRRITVSTSGLA 215 Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-----------ILLSQS-- 241 I+ L +G V +A+ + P +EE + ++ L ++ Sbjct: 216 GRIRDLGTSGIAVNLAVSLSAP---TEELRENLMPISRHHPIRSILSACRAYPLRNRQRI 272 Query: 242 ----VLLKGINDDPEILANLMRTF--VELRI-----KPYYLHHPDLAAGTSHFRLTIEEG 290 VLL G+ND L R ++ PY G+ + R + Sbjct: 273 TFEYVLLGGVNDGEGQARELARLLAPFRSKVNLIPFNPY--------PGSPYHRPDKDRV 324 Query: 291 QKIVASLKEK-ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340 ++ L K ++ + D+ G G++ + + + ++ D Sbjct: 325 RRFQEILLAKGVTATLRTTRGEDILGACGQLALSPSPALTMESSTWKTIDF 375 >gi|42783437|ref|NP_980684.1| hypothetical protein BCE_4391 [Bacillus cereus ATCC 10987] gi|206978420|ref|ZP_03239289.1| RNA modification enzyme, MiaB family [Bacillus cereus H3081.97] gi|217961800|ref|YP_002340370.1| RNA modification enzyme, MiaB family [Bacillus cereus AH187] gi|222097755|ref|YP_002531812.1| fe-s oxidoreductase [Bacillus cereus Q1] gi|229141048|ref|ZP_04269590.1| hypothetical protein bcere0013_41420 [Bacillus cereus BDRD-ST26] gi|229198438|ref|ZP_04325142.1| hypothetical protein bcere0001_39660 [Bacillus cereus m1293] gi|42739366|gb|AAS43292.1| conserved hypothetical protein [Bacillus cereus ATCC 10987] gi|206743376|gb|EDZ54814.1| RNA modification enzyme, MiaB family [Bacillus cereus H3081.97] gi|217065337|gb|ACJ79587.1| RNA modification enzyme, MiaB family [Bacillus cereus AH187] gi|221241813|gb|ACM14523.1| Fe-S oxidoreductase [Bacillus cereus Q1] gi|228584941|gb|EEK43055.1| hypothetical protein bcere0001_39660 [Bacillus cereus m1293] gi|228642326|gb|EEK98615.1| hypothetical protein bcere0013_41420 [Bacillus cereus BDRD-ST26] gi|324328214|gb|ADY23474.1| Fe-S oxidoreductase [Bacillus thuringiensis serovar finitimus YBT-020] Length = 450 Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 19/128 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C FC G + + + + A + E++ T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLMR-SRDGKEVIKQAQQLVDA--GYKEIVLTGIH 198 Query: 151 ----GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + L +L+ + + ++ LR S ++ +I+ E+I+ L ++ Sbjct: 199 TGGYGED---IKDYNLAGLLRDMEAEVDGLKRLRISS----IEASQISDEVIEVLDKSEV 251 Query: 206 PVYIAIHA 213 V +H Sbjct: 252 -VVRHLHI 258 >gi|18312049|ref|NP_558716.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str. IM2] gi|18159475|gb|AAL62898.1| metallo cofactor biosynthesis protein [Pyrobaculum aerophilum str. IM2] Length = 346 Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 19/127 (14%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCF---------RREMVGSQKGTVLSSKDTEAALAYI 138 GIV R + I ++ +C + C FC R + +LS E + Y Sbjct: 22 GIVDRGTNVIEVRPTSICALNCIFCSVNAGPLSRVRWAEYVVEPEPLLS--ALEEVVRY- 78 Query: 139 QEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 ++ + I GDP L ++++ + IK V ++ +R+ ++ E +Q Sbjct: 79 KKTDDVEVHIDGMGDPGHYP--HLAQLVRGAKSIKGVALVSMQTRL-----YMLDKEAVQ 131 Query: 199 CLKEAGK 205 L AG Sbjct: 132 QLANAGL 138 >gi|188588298|ref|YP_001920864.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase [Clostridium botulinum E3 str. Alaska E43] gi|188498579|gb|ACD51715.1| oxygen-independent coproporphyrinogen III oxidase, Fe-S oxidoreductase [Clostridium botulinum E3 str. Alaska E43] Length = 288 Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 19/83 (22%), Positives = 39/83 (46%), Gaps = 8/83 (9%) Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGG 152 + ++++ C C FC M S+ T+ S ++ + + Y + + ++ G Sbjct: 14 NSLIIQATLGCSHNKCSFC---NMYKSKIFTIKSLEEIKKEIDYFRTIYKYVEKIFLADG 70 Query: 153 DPLILSHKRLQKVLKTLRYIKHV 175 D LI+ L+ +L+ YIK+V Sbjct: 71 DALIIPIGDLKSILE---YIKNV 90 >gi|150400543|ref|YP_001324309.1| radical SAM domain-containing protein [Methanococcus aeolicus Nankai-3] gi|150013246|gb|ABR55697.1| Radical SAM domain protein [Methanococcus aeolicus Nankai-3] Length = 290 Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 17/78 (21%), Positives = 40/78 (51%), Gaps = 10/78 (12%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEK-SQIWEVIF 149 +Y ++LK+ + C + C +C+ + + ++ YI +++ ++ F Sbjct: 4 KY---LILKITNRCNLDCIYCYNMGHKINKNMDFTTAK----NSIDYILNDGTELLKIQF 56 Query: 150 TGGDPLILSHKRLQKVLK 167 TGG+PL L+ + ++KV+ Sbjct: 57 TGGEPL-LNFELIEKVIS 73 >gi|124515329|gb|EAY56839.1| putative radical SAM family protein [Leptospirillum rubarum] Length = 379 Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 49/291 (16%), Positives = 91/291 (31%), Gaps = 60/291 (20%) Query: 94 PDRILLKLLHV--CPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIF 149 DR L + C + CRFC R +G + +S A + E Sbjct: 101 DDRATLCVSSQVGCGIGCRFC-RTAEMGLVRNLSVSEILGQVRVANRLLAEAPVRDMSKE 159 Query: 150 TGGDPLILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQ-------RIN------P 194 T P + L + + L H+ S + P+ RI Sbjct: 160 TDPTPFLSRVNHLVFMGMGEPLANFDHLVR----SLAVLTSPEGFGLSSRRITVSTSGLA 215 Query: 195 ELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-----------ILLSQS-- 241 I+ L +G V +A+ + P +EE + ++ L ++ Sbjct: 216 GRIRDLGTSGIAVNLAVSLSAP---TEELRENLMPISRHHPIRSILSACRAYPLRNRQRI 272 Query: 242 ----VLLKGINDDPEILANLMRTF--VELRI-----KPYYLHHPDLAAGTSHFRLTIEEG 290 VLL G+ND L R ++ PY G+ + R + Sbjct: 273 TFEYVLLGGVNDGEGQARELARLLAPFRSKVNLIPFNPY--------PGSPYHRPDKDRV 324 Query: 291 QKIVASLKEK-ISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDH 340 ++ L K ++ + D+ G G++ + + + ++ D Sbjct: 325 RRFQEILLAKGVTATLRTTRGEDILGACGQLALSPSPALTMESSTWKTIDF 375 >gi|219667931|ref|YP_002458366.1| radical SAM protein [Desulfitobacterium hafniense DCB-2] gi|219538191|gb|ACL19930.1| Radical SAM domain protein [Desulfitobacterium hafniense DCB-2] Length = 441 Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 43/212 (20%), Positives = 83/212 (39%), Gaps = 28/212 (13%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI-WEVIFT 150 R P + +++ C + C CF + S + YI + + T Sbjct: 94 RQPTLVEIEVTEGCNLRCPVCF-MAANDFRPDPNPSLEALGEKYRYILRHTNPDTSIQLT 152 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG+P + + L +++ R I Q + ++ ++ R NP+ +Q L EAG I Sbjct: 153 GGEP--TTREDLADIIRLGREIG-FQAIEVNTNGVVI--GR-NPDYLQKLAEAGVS-GIY 205 Query: 211 IHAN----HPYE------FSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILA-NL 257 + + YE + AI+ AG+ ++ +++GIN+ E+L L Sbjct: 206 LQFDGLTGEVYEQIRGENLLPAKLKAIANCREAGVQVVLAMTVIEGINEKQLGEVLKFAL 265 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEE 289 V + I + A G+ F + + + Sbjct: 266 ANKDVIVGIA----YQ--PAFGSGRFDVPLSK 291 >gi|90426035|ref|YP_534405.1| molybdenum cofactor synthesis-like [Rhodopseudomonas palustris BisB18] gi|90108049|gb|ABD90086.1| molybdenum cofactor synthesis-like [Rhodopseudomonas palustris BisB18] Length = 340 Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 3/80 (3%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R+ DR+ + + C C +C V + + +L+ + + + + V TG Sbjct: 19 RHIDRLRVSVTDRCNFRCSYCLGAHPVFAPRAELLTLDELDRLCSAFVGC-GVRRVRLTG 77 Query: 152 GDPLILSHKRLQKVLKTLRY 171 G+PL+ + L ++ L Sbjct: 78 GEPLV--RRNLMSFVRALSR 95 >gi|95929999|ref|ZP_01312739.1| Radical SAM [Desulfuromonas acetoxidans DSM 684] gi|95133968|gb|EAT15627.1| Radical SAM [Desulfuromonas acetoxidans DSM 684] Length = 614 Score = 37.0 bits (85), Expect = 4.4, Method: Composition-based stats. Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 30/187 (16%) Query: 48 NPHNPNDPIARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107 + HN +P+ R P + P + S + G + +L ++ CP Sbjct: 132 DRHNALEPLYRNSGPIDLLHQVSPW--------LDGSLVPG------EGVLWEVSRGCPF 177 Query: 108 YCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLK 167 C FCF G ++ E LA + + +R +K+L+ Sbjct: 178 RCSFCFDAR--GDHGVRTMAFSRLEQELALFVKHRVSQVWVLDST--FNYPAERGKKLLR 233 Query: 168 TLRYI-KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAA 226 ++ + H+ FH I I+ EL Q L E V I + + + + Sbjct: 234 LIKRVAPHLH---FHLEAKIEF---IDEELAQLLSEIHCSVQIGL-----QSANPDVVRH 282 Query: 227 ISRLANA 233 + R +A Sbjct: 283 VHRHFDA 289 >gi|257062773|ref|YP_003142445.1| pyruvate formate-lyase activating-like enzyme [Slackia heliotrinireducens DSM 20476] gi|256790426|gb|ACV21096.1| pyruvate formate-lyase activating-like enzyme [Slackia heliotrinireducens DSM 20476] Length = 464 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 16/63 (25%), Positives = 26/63 (41%), Gaps = 2/63 (3%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-QEKSQIWEVIFTGGDPLIL 157 CP C FCF + G + +D + LA I + + + TGG+PL+ Sbjct: 126 FFYSLRCPKNCFFCF-NHNQNNYAGYLDDDRDWRSELAAIMEAGRPMTHLALTGGEPLMR 184 Query: 158 SHK 160 + Sbjct: 185 PDE 187 >gi|317488970|ref|ZP_07947500.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA] gi|316912044|gb|EFV33623.1| radical SAM superfamily protein [Eggerthella sp. 1_3_56FAA] Length = 529 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 41/119 (34%), Gaps = 19/119 (15%) Query: 91 HRYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQI 144 RY +R + C CR C S L D + + + I Sbjct: 141 RRYQNRFVRTAHWSITGKCNYRCRHC-----YMSAPDAKLGEIDHDTMMDLARQIADCGI 195 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 EV TGG+PL+ +++ L +R + + ++ +L+ L+E Sbjct: 196 LEVSLTGGEPLVRRDFM--ELVDALLSY----RIRIA--QIYTNGKLVDEKLLDQLEER 246 >gi|310658009|ref|YP_003935730.1| radical sam domain-containing protein [Clostridium sticklandii DSM 519] gi|308824787|emb|CBH20825.1| Radical SAM domain protein [Clostridium sticklandii] Length = 453 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L+K + CP C FCF +E+ ++D E +A I + + E+ D + Sbjct: 184 ALIKTSYGCPYNCSFCFCKEITSG----KYYARDIEDVVAEISQIPE-KEIYIVDDD-FL 237 Query: 157 LSHKRLQKVLKTLRY 171 + RL+K + L+ Sbjct: 238 YNEDRLKKFIALLKE 252 >gi|297545376|ref|YP_003677678.1| Radical SAM domain-containing protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|296843151|gb|ADH61667.1| Radical SAM domain protein [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 453 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 16/64 (25%), Positives = 27/64 (42%), Gaps = 5/64 (7%) Query: 99 LKLLHVCPVYCRFCFR----REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 L L + C + C +C+ R L + + +I E+ I +IF GG+P Sbjct: 72 LHLTYGCNMNCPYCYIPESYRRNYQKMSYNQL-EEIIDKLSKWINERGGIKRIIFHGGEP 130 Query: 155 LILS 158 L+ Sbjct: 131 LLAK 134 >gi|289207329|ref|YP_003459395.1| molybdenum cofactor biosynthesis protein A [Thioalkalivibrio sp. K90mix] gi|288942960|gb|ADC70659.1| molybdenum cofactor biosynthesis protein A [Thioalkalivibrio sp. K90mix] Length = 334 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 35/90 (38%), Gaps = 3/90 (3%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + L + C + C +C + ++ LS ++ E + V TGG+PL Sbjct: 22 VRLSVTDRCDLRCFYCMPKGFRDFEEPEHWLSFEEIERVMGAFGRLGT-RRVRLTGGEPL 80 Query: 156 ILSH-KRLQKVLKTLRYIKHVQILRFHSRV 184 + + L L L I + + +R+ Sbjct: 81 VRKNLPDLAARLNALPGIDDISLSTNATRM 110 >gi|325958807|ref|YP_004290273.1| Radical SAM domain-containing protein [Methanobacterium sp. AL-21] gi|325330239|gb|ADZ09301.1| Radical SAM domain protein [Methanobacterium sp. AL-21] Length = 506 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 3/61 (4%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P +++ + C + C C+ E G + L+S+ + L + +S + + F+GG+ Sbjct: 126 PFQVVWNITKSCNMNCAHCY--ENAGKKADDELNSEQIKQCLETL-SRSGVTSIAFSGGE 182 Query: 154 P 154 P Sbjct: 183 P 183 >gi|299140666|ref|ZP_07033804.1| 2-methylthioadenine synthetase [Prevotella oris C735] gi|298577632|gb|EFI49500.1| 2-methylthioadenine synthetase [Prevotella oris C735] Length = 446 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 28/141 (19%), Positives = 58/141 (41%), Gaps = 14/141 (9%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C G + ++S +A A + +I + TG + Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVAQAEEAAAEGGKEI---VLTGVN 209 Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 +H++ ++K L ++ ++ R S ++P I+ +LI E+ Sbjct: 210 IGHFGETTHEKFIDLVKALDKVEGIKRFRISS----LEPDLIDDDLIAFCAESR---AFM 262 Query: 211 IHANHPYEFSEEAI-AAISRL 230 H + P + +A+ + RL Sbjct: 263 PHFHIPLQSGSDAVLKLMHRL 283 >gi|296242351|ref|YP_003649838.1| radical SAM domain-containing protein [Thermosphaera aggregans DSM 11486] gi|296094935|gb|ADG90886.1| Radical SAM domain protein [Thermosphaera aggregans DSM 11486] Length = 306 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C FC R + G + VL+ D LAY+ K I TGG+PL+ Sbjct: 15 IVVTMRCNYNCIFCHREGLTGLDRAEVLTPDDY-RYLAYVSRKLGIVYFKITGGEPLLRR 73 Query: 159 H 159 Sbjct: 74 D 74 >gi|257793769|ref|ZP_05642748.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|258420985|ref|ZP_05683916.1| conserved hypothetical protein [Staphylococcus aureus A9719] gi|257787741|gb|EEV26081.1| conserved hypothetical protein [Staphylococcus aureus A9781] gi|257842933|gb|EEV67351.1| conserved hypothetical protein [Staphylococcus aureus A9719] Length = 381 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ P E + + ++ L I ++C + C C + Sbjct: 10 IHNDPWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56 Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 57 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 109 >gi|302541842|ref|ZP_07294184.1| basic proline-rich protein [Streptomyces hygroscopicus ATCC 53653] gi|302459460|gb|EFL22553.1| basic proline-rich protein [Streptomyces himastatinicus ATCC 53653] Length = 569 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 14/81 (17%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA-----LAYIQEKSQIWEVIFTG 151 +LL + CP+ C C + + S+ +AA + + V+ TG Sbjct: 17 VLLTVTRRCPLACAHC--------STASSMGSEQIDAAVLKRFVGTFTPADRPEYVLLTG 68 Query: 152 GDPLILSHKRLQKVLKTLRYI 172 G+PL L + + ++ + +R + Sbjct: 69 GEPL-LRPRLVAEIAERVRDV 88 >gi|297566420|ref|YP_003685392.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus silvanus DSM 9946] gi|296850869|gb|ADH63884.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus silvanus DSM 9946] Length = 371 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 8/114 (7%) Query: 96 RILLKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R L + CP C +C G L EAA Y + + + GG Sbjct: 2 RSLYVHVPFCPTLCPYCDFHVVRRYGGVVEAYLERLAEEAAALYERFPGPLETLYLGGGT 61 Query: 154 PLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 P L ++ L+++ + L + + + + +P +NPE ++ LK+ G Sbjct: 62 PSFLRNRELEQLFRALPWNVPSIHEVTME-----ANPGTLNPERLELLKDLGVN 110 >gi|258405933|ref|YP_003198675.1| Radical SAM domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257798160|gb|ACV69097.1| Radical SAM domain protein [Desulfohalobium retbaense DSM 5692] Length = 442 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 45/239 (18%), Positives = 93/239 (38%), Gaps = 50/239 (20%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 LL++ C + C CF R + GT +A+I+E + + +GG+P Sbjct: 91 TTLLEVTQRCNLGCPICFARSL---DSGTDPDLDTLARNMAHIRETAGPCTLQLSGGEP- 146 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI--NPELIQCLKEAGKPVYI---- 209 + L +++ L ++ ++++ ++ R PE + L+EAG Sbjct: 147 TVRDD-LPEIV-RLAAAQNFRLVQLNTNGL-----RFAREPEYARALREAGLEAVFFQFD 199 Query: 210 AIH-----ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVEL 264 ++H EE A++ + AG+ ++ L+ G+N + + Sbjct: 200 SVHDADYTTIRGRALWEEKQQALTAMGRAGLGVVLVPTLVPGVNTRA------IGAILRF 253 Query: 265 RIKPYYLHHPDLAAGTSHFRLTIE---------------EGQKIVASLKEKISGLCQPF 308 ++ HHP + G HF+ I +I+ +L+E+ +GL + Sbjct: 254 GVQ----HHP-VVRGV-HFQ-PISYFGRYPAPPADTDRLTLPEIMRALEEQTAGLVRTQ 305 >gi|219853185|ref|YP_002467617.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c] gi|219547444|gb|ACL17894.1| Radical SAM domain protein [Methanosphaerula palustris E1-9c] Length = 381 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 46/231 (19%), Positives = 85/231 (36%), Gaps = 53/231 (22%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P I + CP+ C C+ + VLS+++ + + I+ + V+ +GG+ Sbjct: 31 PRIISWNITLRCPLKCAHCYVDAG-EKEADRVLSTQEALSVIDQIRAIGKP-VVVLSGGE 88 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHS----RVPI-VDPQRINPELIQCLKEAG-KPV 207 PL + + + I R+ + R+ + I+ E LKEAG + V Sbjct: 89 PL---------LREDMYDIA-----RYGTEQGLRMVMGTSGYLIDQETAAKLKEAGIRAV 134 Query: 208 YI-------AIH--ANHPYEFSEEAIAAISRLANAGIIL-LSQSVLLKGINDDPEILANL 257 I A H E+A AI +AGI + ++ SV+ I+ + +L Sbjct: 135 AISLDSKDPATHDAFRGLDGVWEKATKAIGHCHDAGIAVQINMSVMRSAIS----EVEDL 190 Query: 258 MRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKI-------VASLKEKI 301 + L + Y L F + ++I + +I Sbjct: 191 IGLGTSLGVHDYQLF----------FPIPTGRARQIEPRSPEEYEEMIRRI 231 >gi|115622853|ref|XP_791955.2| PREDICTED: similar to MGC84142 protein, partial [Strongylocentrotus purpuratus] Length = 267 Score = 37.0 bits (85), Expect = 4.5, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 44/89 (49%), Gaps = 4/89 (4%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R+ + + + L C + C++C E V S K +LS+++ + ++ Sbjct: 81 QRHHNYLRISLTERCNLRCQYCMPEEGVTLSPKERLLSTEEILHLAKLFVS-EGVDKIRL 139 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 TGG+PL+ + ++++ LR ++ ++ + Sbjct: 140 TGGEPLVRKD--IVEIIEGLRELEGLKQI 166 >gi|304314983|ref|YP_003850130.1| Fe-S oxidoreductase [Methanothermobacter marburgensis str. Marburg] gi|302588442|gb|ADL58817.1| predicted Fe-S oxidoreductase [Methanothermobacter marburgensis str. Marburg] Length = 491 Score = 37.0 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 33/170 (19%), Positives = 62/170 (36%), Gaps = 30/170 (17%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPL 155 L+ + + C + C CF V + ++ L ++ + + + GG+P Sbjct: 93 LIDVTNRCNLKCPICFANAAVSKY-LYEPTYEEIREMLRNLRRNRPVPTPAIQYAGGEPT 151 Query: 156 ILSH-KRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + L K+ + HVQI +R + PEL L+EAG + Sbjct: 152 VRKDIVELVKLARE-EGFTHVQIATNGVRLARK----------PELAAELREAGLNT-VY 199 Query: 211 IHANHPYE----------FSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + E + AI AG+ ++ L++G+ND Sbjct: 200 LQFDGVTEEPYLVSRGKNLLPLKLQAIENCRKAGLGIVLVPTLVRGLNDS 249 >gi|302385311|ref|YP_003821133.1| MiaB-like tRNA modifying enzyme [Clostridium saccharolyticum WM1] gi|302195939|gb|ADL03510.1| MiaB-like tRNA modifying enzyme [Clostridium saccharolyticum WM1] Length = 454 Score = 37.0 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 23/131 (17%), Positives = 46/131 (35%), Gaps = 25/131 (19%) Query: 94 PDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R +K+ C +C +C R + + V+ A Y E++F Sbjct: 159 HTRAFIKVQDGCNQFCSYCIIPYTRGRVRSRKPDEVVEEVKRLTASGY-------QEIVF 211 Query: 150 TGGD----PLILSHKR---LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 TG + K L ++K + ++ ++ +R S ++P+ + + L Sbjct: 212 TGIHLSSYGMDFPEKERLTLLDLVKRVHEVEGLKRIRLGS----LEPRIVTEKFAAELAR 267 Query: 203 AGKPVYIAIHA 213 K I H Sbjct: 268 LSK---ICPHF 275 >gi|268607898|ref|ZP_06141629.1| thiamine biosynthesis protein ThiH [Ruminococcus flavefaciens FD-1] Length = 483 Score = 37.0 bits (85), Expect = 4.6, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 34/86 (39%), Gaps = 4/86 (4%) Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y DRI+ L L + C C +C + L+ + + +Q+ I Sbjct: 88 YGDRIVMFAPLYLSNYCVNQCVYCPYHQQNKEIPRKKLTQDEVRDEVIALQDMGHKRLAI 147 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174 G DP+ + + + + T+ IKH Sbjct: 148 EAGEDPVNNPIEYILECINTIYSIKH 173 >gi|262201214|ref|YP_003272422.1| molybdenum cofactor biosynthesis protein A [Gordonia bronchialis DSM 43247] gi|262084561|gb|ACY20529.1| molybdenum cofactor biosynthesis protein A [Gordonia bronchialis DSM 43247] Length = 365 Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 3/77 (3%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + + C + C +C E + +LS+ + L + + FTGG+PL+ Sbjct: 44 VSVTDRCNLRCTYCMPAEGLDWMDSAELLSTDELVRVLTVAVRDLGVHRIRFTGGEPLLR 103 Query: 158 SHKRLQKVLKTLRYIKH 174 L++++ + + Sbjct: 104 RD--LEEIIARMAALPQ 118 >gi|297583859|ref|YP_003699639.1| radical SAM domain-containing protein [Bacillus selenitireducens MLS10] gi|297142316|gb|ADH99073.1| Radical SAM domain protein [Bacillus selenitireducens MLS10] Length = 372 Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 34/196 (17%), Positives = 62/196 (31%), Gaps = 25/196 (12%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P ++ ++ C + C C L+ K+ + I E ++FTGGD Sbjct: 9 PFIVIWEVTRACELRCLHCRADAQTEPHPDE-LNHKEGLRLIDAIHEMDNPM-LVFTGGD 66 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY----- 208 ++ L L + +R S P + E ++ KE G + Sbjct: 67 CMMRED------LFELADYAIQKGMRV-SMTPSAT-DNVTKEKMEKAKEVGLSRWAFSLD 118 Query: 209 -----IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFV 262 I H F + I+ L + L +V+ K E +A L+ Sbjct: 119 GPTPEIHDHFRGTSGSFD-LTLDKINYLKELDMPLQINTVISKYNYHALEEMAALVEELD 177 Query: 263 ELRIKPYYLHHPDLAA 278 + +Y+ Sbjct: 178 ---VIMWYIFLLVPTG 190 >gi|86609143|ref|YP_477905.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Synechococcus sp. JA-2-3B'a(2-13)] gi|123502140|sp|Q2JKY0|MIAB_SYNJB RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|86557685|gb|ABD02642.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Synechococcus sp. JA-2-3B'a(2-13)] Length = 444 Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 27/142 (19%), Positives = 56/142 (39%), Gaps = 20/142 (14%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGG- 152 + +++ C C +C + G ++ S+ +A A I+ ++ EV G Sbjct: 146 TAWINVIYGCNERCTYCIVPRVRGQEQ-----SRQPQAIRAEIEDVARAGYREVTLLGQN 200 Query: 153 -DPL---ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 D + L +L+ + ++ ++ +RF + P ELI E K Sbjct: 201 IDAYGRDLDPKTNLASLLRFVHSVEGIERIRFATSHPRY----FTEELITTCAELPK--- 253 Query: 209 IAIHANHPYEF-SEEAIAAISR 229 + H + P++ S E + + R Sbjct: 254 VCEHFHIPFQAGSNEVLKRMRR 275 >gi|78223499|ref|YP_385246.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Geobacter metallireducens GS-15] gi|123756395|sp|Q39TA3|MIAB_GEOMG RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|78194754|gb|ABB32521.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Geobacter metallireducens GS-15] Length = 441 Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 17/121 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK--SQIWEVIFTGGD--- 153 + ++ C +C +C V +G +S + E + I+ + EV G + Sbjct: 152 VTVMQGCDNFCSYCI----VPYVRGREISRRSVE-IIGEIRSAVAGGVREVTLLGQNVNS 206 Query: 154 PLILSHKRL--QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + + L +L+ + I ++ +RF + P+ I+PELI C E K + I Sbjct: 207 YGLKTPGELSFAGLLREISAIDGLERIRFTTSH----PKDISPELIACFAELPK-LCGHI 261 Query: 212 H 212 H Sbjct: 262 H 262 >gi|325831056|ref|ZP_08164380.1| radical SAM domain protein [Eggerthella sp. HGA1] gi|325486977|gb|EGC89423.1| radical SAM domain protein [Eggerthella sp. HGA1] Length = 475 Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 42/119 (35%), Gaps = 19/119 (15%) Query: 91 HRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQI 144 RY +R + + C CR C S L D + + + I Sbjct: 87 RRYQNRFVRTAHWSITGKCNYRCRHC-----YMSAPDAKLGEIDHDTMMDLARQIADCGI 141 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 EV TGG+PL+ +++ L +R + + ++ +L+ L+E Sbjct: 142 LEVSLTGGEPLVRRDFM--ELVDALLSY----RIRIA--QIYTNGKLVDEKLLDQLEER 192 >gi|302341873|ref|YP_003806402.1| nitrogenase cofactor biosynthesis protein NifB [Desulfarculus baarsii DSM 2075] gi|301638486|gb|ADK83808.1| nitrogenase cofactor biosynthesis protein NifB [Desulfarculus baarsii DSM 2075] Length = 428 Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 7/80 (8%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAY----IQEKSQIWEVI 148 R L + +C + C +C RR ++ +SS + A AY +Q + ++ Sbjct: 22 GRAHLPVAPLCNIKCNYCDRRYDCVNESRPGVSSAVLQPHQAQAYMERALQAEPRLSVAG 81 Query: 149 FTG-GDPLILSHKRLQKVLK 167 G GDPL + L+ +L+ Sbjct: 82 IAGPGDPLANAEATLETILR 101 >gi|217969807|ref|YP_002355041.1| ribosomal RNA large subunit methyltransferase N [Thauera sp. MZ1T] gi|217507134|gb|ACK54145.1| Radical SAM domain protein [Thauera sp. MZ1T] Length = 347 Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 38/215 (17%) Query: 104 VCPVYCRFCFRREMVGSQKGTV-LSSKDTEAALAYIQEKSQIWEVIFTG-GDPLILSHKR 161 C V C FC M G L S + A +A + ++ +V+F G G+P Sbjct: 104 GCAVGCVFC----MTGKDGLLRQLDSGEIVAQVALARRLRRVHKVVFMGMGEPA----HN 155 Query: 162 LQKVLKTLR------YIKH-------VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 L V++ + + H V LR R+P R+ P L L + Sbjct: 156 LDAVIEAIELLGTEGALPHKNLVLSTVGDLRVFERLPQ---MRVKPALALSLHSTRAALR 212 Query: 209 IAIHANHPYEFSE-EAIAAISRLANA-GIILLSQSVLLKGINDDPEILANLMRTFVE--- 263 A+ P E + A A G + Q L++G+ND + L ++R Sbjct: 213 AALLPRAPR-IDPAELVELGEAWARASGYPIQYQWTLIEGVNDGEDELEGIVRLLAGKYA 271 Query: 264 -LRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASL 297 + + P + G + R E +I L Sbjct: 272 VMNMIP-----FNRVDGLDYRRPAAESAAEIARRL 301 >gi|150396791|ref|YP_001327258.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium medicae WSM419] gi|166217890|sp|A6U9U3|MOAA_SINMW RecName: Full=Molybdenum cofactor biosynthesis protein A gi|150028306|gb|ABR60423.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium medicae WSM419] Length = 349 Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + ++ TGG+PL+ Sbjct: 34 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELHRLCSAFIA-KGVRKLRLTGGEPLVRK 92 Query: 159 HKR--LQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211 + ++++ K + + + + S++ + EL+ C V + Sbjct: 93 NIMFLIRELGKEIEAGRLDELTLTTNGSQL-----SKFAAELVDC-GVRRINVSLDTLDP 146 Query: 212 ----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 E ++ + I AG+ + +V LK ND + LMR Sbjct: 147 DKFRQITRWGELTK-VLEGIDAALAAGLKVKINAVALKDFND--AEIPELMR 195 >gi|309789580|ref|ZP_07684161.1| RNA modification enzyme, MiaB family [Oscillochloris trichoides DG6] gi|308228316|gb|EFO81963.1| RNA modification enzyme, MiaB family [Oscillochloris trichoides DG6] Length = 450 Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 25/149 (16%), Positives = 52/149 (34%), Gaps = 27/149 (18%) Query: 67 LNILPEERED----PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQK 122 L P D P+ D H P+ + + + + C + C +C + G ++ Sbjct: 133 LAPNPIYTLDEPALPVRDAAHPPVA---------VHVPIQYGCNMRCSYCVIPQRRGRER 183 Query: 123 GTVLSSKDTEAALAYIQEKSQIWEVIFT------GGDPLILSHKRLQKVLKTLRYIKHVQ 176 L + A + I + V+ G D + +L +++ + I + Sbjct: 184 SRSL--DEIVAEVTRIVDHGAREIVLLGQIVDSWGHD--LPGRPQLADLIRAVHAIPGLL 239 Query: 177 ILRFHSRVPIVDPQRINPELIQCLKEAGK 205 LRF + P + LI+ + + Sbjct: 240 RLRFLTSH----PAWMTDHLIETVASLPR 264 >gi|229096386|ref|ZP_04227358.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-29] gi|228686948|gb|EEL40854.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock3-29] Length = 383 Score = 37.0 bits (85), Expect = 4.7, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 32/184 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + Y E + +FTG Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGRKLIDDIYEMENPML---VFTG 70 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 121 Query: 209 --------IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 I H ++ + +I + L I + +V+ K D + +A L Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNSIRYLHELK---IPIQINTVVSKYNVDVLKEMAML 178 Query: 258 MRTF 261 + Sbjct: 179 IEEL 182 >gi|260893438|ref|YP_003239535.1| molybdenum cofactor biosynthesis protein A [Ammonifex degensii KC4] gi|260865579|gb|ACX52685.1| molybdenum cofactor biosynthesis protein A [Ammonifex degensii KC4] Length = 316 Score = 37.0 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 16/85 (18%), Positives = 37/85 (43%), Gaps = 12/85 (14%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAYIQEKSQI--WEVIFTGGD 153 + + C + CR+C + ++ + E + ++ ++I +V TGG+ Sbjct: 8 VSVTDRCNLRCRYCL-----PPEGVKTVAHAEILRFEEIVRIVKAATRIGVRKVRLTGGE 62 Query: 154 PLILSHKRLQKVLKTLRYIKHVQIL 178 PL+ + L ++ L I+ + L Sbjct: 63 PLV--RRNLSSLVAQLAAIEEIDDL 85 >gi|157146881|ref|YP_001454200.1| coproporphyrinogen III oxidase [Citrobacter koseri ATCC BAA-895] gi|157084086|gb|ABV13764.1| hypothetical protein CKO_02656 [Citrobacter koseri ATCC BAA-895] Length = 445 Score = 37.0 bits (85), Expect = 4.8, Method: Composition-based stats. Identities = 30/145 (20%), Positives = 56/145 (38%), Gaps = 12/145 (8%) Query: 62 PQKEELNILPEEREDPIGDNNHSP-LKGIVHRY---PDRILLKLLHVCPVYCRFC-FRRE 116 P K+ +P P+ S + ++ + R++ + C +C FC F + Sbjct: 20 PFKDRRATMPWRGAIPVAKEQLSQTWQNVISQTVPPRKRLVYLHIPFCATHCTFCGFYQN 79 Query: 117 MVGSQKGTVLSS---KDTE-AALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY- 171 + ++ E A + + + + I V F GG P LS + L K++ TLR Sbjct: 80 RFEEDHCARYTDALLREIEMEADSTLHQSAPIHAVYFGGGTPSALSARDLAKIITTLREK 139 Query: 172 --IKHVQILRFHSRVPIVDPQRINP 194 + + RV D R++ Sbjct: 140 LPLAPDCEITIEGRVLNFDDARVDA 164 >gi|323345505|ref|ZP_08085728.1| MiaB tRNA modifying enzyme-like protein [Prevotella oralis ATCC 33269] gi|323093619|gb|EFZ36197.1| MiaB tRNA modifying enzyme-like protein [Prevotella oralis ATCC 33269] Length = 432 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 24/115 (20%), Positives = 42/115 (36%), Gaps = 14/115 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS----QI--WEVIFT 150 LK+ C +C +C + G K + + + QI E+ + Sbjct: 138 AYLKIAEGCDRHCAYCAIPLITG--KHVSRPKAEILQEVEELVANGVKEFQIIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D I + + ++ + IK V+ +R H P P EL+ +KE Sbjct: 196 GVD--IDGKRHIADLISAIADIKGVKWIRLHYAYPNQFPM----ELLDVMKEKSN 244 >gi|293332751|ref|NP_001168389.1| hypothetical protein LOC100382158 [Zea mays] gi|223947957|gb|ACN28062.1| unknown [Zea mays] Length = 774 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 20/105 (19%) Query: 55 PIARQFIPQKEELNILPEEREDP-------IGDNNHSPLKGIVHRYPDRILLKLLHVCPV 107 PI R + +EEL++ P E+ D ++ +SP + C Sbjct: 288 PITRLVVSLREELHVHPYEKIDWKAARNSCAKEDVYSPHTWLQ-------------ECLS 334 Query: 108 YCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 +C + F + + + K + +++ + + + I G Sbjct: 335 HCLYSFGEPFLTRWPISYMRKKALQQVAEFLKYEDENSQYICIGA 379 >gi|169335672|ref|ZP_02862865.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM 17244] gi|169258410|gb|EDS72376.1| hypothetical protein ANASTE_02092 [Anaerofustis stercorihominis DSM 17244] Length = 454 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 32/129 (24%), Positives = 62/129 (48%), Gaps = 12/129 (9%) Query: 63 QKEELNILPEEREDPIGDNN-HSPLKGIVHRYPDRIL-----LKLLHVCPVYCRFCFRRE 116 +EE+ + E ++ +N ++P K + + ++ + L + H C + CR+CF Sbjct: 53 DEEEIKEVIGELKELEAENRLYTPEKKVNRKLYEKGIVKAMCLHVSHDCNLACRYCFASG 112 Query: 117 MVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLKTL--RY 171 + K V++ + + A+ +I S EV F GG+PL L+ ++K ++ Sbjct: 113 GNFNMKKEVMNIETAKKAIDFIISNSGNKVHLEVDFFGGEPL-LNFDVVKKTVEYAKEEA 171 Query: 172 IKHVQILRF 180 KH +I RF Sbjct: 172 KKHNKIFRF 180 >gi|85860714|ref|YP_462916.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB] gi|85723805|gb|ABC78748.1| radical SAM superfamily protein [Syntrophus aciditrophicus SB] Length = 396 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 24/135 (17%), Positives = 49/135 (36%), Gaps = 35/135 (25%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI-------QEKSQIWEVIFTG 151 + C + C +C+ ++G K +S A+ YI E S IW+ I G Sbjct: 26 FIVTEDCQLRCGYCY---IIGKNKFNRMSFTIARTAVDYILHNRALFWEDSVIWDFI--G 80 Query: 152 GDPLI---LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI----------NPELIQ 198 G+PL+ L + + + + + H P + R ++ + Sbjct: 81 GEPLLEIELIDRICDYIKRRMYELDH----------PWFNSYRFSFSTNGLLYGTEKVQR 130 Query: 199 CLKEAGKPVYIAIHA 213 +++ + I+I Sbjct: 131 FIRKNAHHLSISISI 145 >gi|332981504|ref|YP_004462945.1| Radical SAM domain-containing protein [Mahella australiensis 50-1 BON] gi|332699182|gb|AEE96123.1| Radical SAM domain protein [Mahella australiensis 50-1 BON] Length = 454 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 23/85 (27%), Positives = 39/85 (45%), Gaps = 7/85 (8%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L L H C + C +CF + T++++ AAL ++ S EV F GG+PL Sbjct: 99 LHLSHDCNMRCSYCFASTGDFGGQRTLMTADTGRAALDFLVRHSGSRRHLEVDFFGGEPL 158 Query: 156 ILSH--KRLQKVLKTLRYI--KHVQ 176 + K + + + L KH++ Sbjct: 159 MNFDAMKDIVEYGRRLEQSSGKHIR 183 >gi|322833884|ref|YP_004213911.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rahnella sp. Y9602] gi|321169085|gb|ADW74784.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rahnella sp. Y9602] Length = 474 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 8/118 (6%) Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 + ++ C YC FC R E V VL AA + V Sbjct: 148 TAFVSIMEGCNKYCSFCVVPYTRGEEVSRPCDDVLFEVAQLAAQGVREVNLLGQNVNAYR 207 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 GD ++L+ + I + +RF + P+ ++I+ K+ + V Sbjct: 208 GDAFEGGVCTFAELLRLVAAIDGIDRIRFTTSHPV----EFTDDIIEVYKDTPEVVSF 261 >gi|229115397|ref|ZP_04244804.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock1-3] gi|228668011|gb|EEL23446.1| Coenzyme PQQ synthesis protein [Bacillus cereus Rock1-3] Length = 383 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 37/184 (20%), Positives = 66/184 (35%), Gaps = 32/184 (17%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + Y E + +FTG Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGRKLIDDIYEMENPML---VFTG 70 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY-- 208 GDPL+ + + + +R S P P + E IQ KE G + Sbjct: 71 GDPLMRPDVYDIAEYAVK-------KGVRV-SMTPSATPN-VTKETIQKAKEVGLARWAF 121 Query: 209 --------IAIHA---NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANL 257 I H ++ + +I + L I + +V+ K D + +A L Sbjct: 122 SLDGPTAEIHDHFRGTEGSFQLTMNSIRYLHELK---IPIQINTVVSKYNVDVLKEMAML 178 Query: 258 MRTF 261 + Sbjct: 179 IEEL 182 >gi|218506865|ref|ZP_03504743.1| coproporphyrinogen III oxidase [Rhizobium etli Brasil 5] Length = 135 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 13/75 (17%), Positives = 28/75 (37%), Gaps = 4/75 (5%) Query: 105 CPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHK 160 C C +C R Q+ + + AA+ + + + GG P ++ + Sbjct: 6 CAAKCPYCDFNSHVRHQPVDQERFAAAFLNETAAVRAMSGPKTVTSIFLGGGTPSLMKPE 65 Query: 161 RLQKVLKTLRYIKHV 175 + +L ++ HV Sbjct: 66 TVAAILDSIARHWHV 80 >gi|164686956|ref|ZP_02210984.1| hypothetical protein CLOBAR_00582 [Clostridium bartlettii DSM 16795] gi|164603841|gb|EDQ97306.1| hypothetical protein CLOBAR_00582 [Clostridium bartlettii DSM 16795] Length = 166 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 23/54 (42%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 CP +C+ CF E G ++ + L I + S ++ GG+PL Sbjct: 23 TQGCPHHCKGCFNGETWDFNSGKEFKKENLDYILENINKNSVQRDLSILGGEPL 76 >gi|299531597|ref|ZP_07045002.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni S44] gi|298720313|gb|EFI61265.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni S44] Length = 380 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 40/244 (16%), Positives = 80/244 (32%), Gaps = 46/244 (18%) Query: 99 LKLLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ ++LS ++ + ++ TGG+ Sbjct: 44 ISVTDRCNFRCNYCMPKEVFDKNYQYLPHSSLLSFEEITRLARLFVAH-GVRKLRLTGGE 102 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN--------PELIQCLKEAGK 205 PL+ K ++ ++ L + R P P + + LKEAG Sbjct: 103 PLL--RKNIEALIAQLAEL----------RTPDGQPLDLTLTTNASLLARKARALKEAGL 150 Query: 206 PVYIA-------IHANHPYEFS---EEAIAAISRLANAGI-ILLSQSVLLKGINDDPEIL 254 + + +A I AG+ + V+ +G NDD + Sbjct: 151 NRVTVSLDGLDDTVFRRMNDVDFPVTDVLAGIEAAQTAGLSHIKVNMVVKRGTNDD--QI 208 Query: 255 ANLMRTFVELRIKPYYLHHP-DLAAGTSHFRLT-IEEGQKIVASLKEKISGLCQPFYILD 312 + R F I T+ +R+ + +++A L+ ++ P Sbjct: 209 LPMARYFRGTGIT--LRFIEYMDVGATNGWRMDEVLPSDEVIARLRAELP--LIP-LAPS 263 Query: 313 LPGG 316 PG Sbjct: 264 APGE 267 >gi|228924516|ref|ZP_04087716.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] gi|228835141|gb|EEM80582.1| Coenzyme PQQ synthesis protein [Bacillus thuringiensis serovar huazhongensis BGSC 4BD1] Length = 378 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 6/68 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA--YIQEKSQIWEVIFTG 151 P ++ +L C + C C R E + L+ ++ + + Y + + +FTG Sbjct: 15 PFIVIWELTRACQLKCLHC-RAEAQYHRHPLELTFEEGKKLIDDVYEMDNPML---VFTG 70 Query: 152 GDPLILSH 159 GDPL+ Sbjct: 71 GDPLMHPD 78 >gi|169343771|ref|ZP_02864770.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens C str. JGS1495] gi|169298331|gb|EDS80421.1| molybdenum cofactor biosynthesis protein A [Clostridium perfringens C str. JGS1495] Length = 331 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 13/81 (16%), Positives = 33/81 (40%), Gaps = 4/81 (4%) Query: 99 LKLLHVCPVYCRFCFRR-EMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C + +++ + + I +V TGG+PL+ Sbjct: 22 ISLTDKCNLRCAYCMEKDHNDFIHNDKLMTLDEILRVVKECAS-IGIKKVRLTGGEPLV- 79 Query: 158 SHKRLQKVLKTLRYIKHVQIL 178 + + ++K + I ++ + Sbjct: 80 -REGIVDLIKNINKIPEIEEI 99 >gi|167768199|ref|ZP_02440252.1| hypothetical protein CLOSS21_02755 [Clostridium sp. SS2/1] gi|317499083|ref|ZP_07957362.1| thiazole biosynthesis protein ThiH [Lachnospiraceae bacterium 5_1_63FAA] gi|167709723|gb|EDS20302.1| hypothetical protein CLOSS21_02755 [Clostridium sp. SS2/1] gi|291560220|emb|CBL39020.1| iron-only hydrogenase maturation protein HydG [butyrate-producing bacterium SSC/2] gi|316893603|gb|EFV15806.1| thiazole biosynthesis protein ThiH [Lachnospiraceae bacterium 5_1_63FAA] Length = 472 Score = 37.0 bits (85), Expect = 4.9, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 4/86 (4%) Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y +RI+ L L + C C +C + L+ ++ + + +Q+ + Sbjct: 80 YGNRIVMFAPLYLANYCVNGCTYCPYHYKNKHIRRKKLTQEEIKKEVIALQDMGHKRLAL 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174 TG DP+ + + + + +KT+ IKH Sbjct: 140 ETGEDPVNIPIEYVLESIKTIYSIKH 165 >gi|323704599|ref|ZP_08116177.1| biotin and thiamin synthesis associated [Thermoanaerobacterium xylanolyticum LX-11] gi|323536061|gb|EGB25834.1| biotin and thiamin synthesis associated [Thermoanaerobacterium xylanolyticum LX-11] Length = 466 Score = 37.0 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 6/114 (5%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREM 117 EE +L +D I + + + I + Y +RI+ L + + C CR+C + Sbjct: 43 TPEEAAVLLNLEDDEILEEMYKVARYIKEQIYGNRIVIFAPLYISNYCVNNCRYCGYKH- 101 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 Q+ L+ + + ++E + G DP+ + V+KT+ Sbjct: 102 SNEQERKRLTMDEVRREIEILEEMGHKRLAVEAGEDPVNCPIDYVLDVIKTIYD 155 >gi|254489978|ref|ZP_05103173.1| molybdenum cofactor biosynthesis protein A [Methylophaga thiooxidans DMS010] gi|224465063|gb|EEF81317.1| molybdenum cofactor biosynthesis protein A [Methylophaga thiooxydans DMS010] Length = 335 Score = 37.0 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 3/78 (3%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + + C C +C EM + +L+ ++ + E + +V TGG+PLI Sbjct: 19 VRMSITDRCDFRCVYCMDEEMTFMPREQLLTLEEIVFLMRAFCE-LGVEKVRITGGEPLI 77 Query: 157 LSHKRLQKVLKTLRYIKH 174 + + + + + +KH Sbjct: 78 --RRNVDWLFEQIGQLKH 93 >gi|110681057|ref|YP_684064.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter denitrificans OCh 114] gi|123361551|sp|Q161G5|MIAB_ROSDO RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|109457173|gb|ABG33378.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter denitrificans OCh 114] Length = 441 Score = 37.0 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 39/120 (32%), Gaps = 14/120 (11%) Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSK 129 ED + P R P L + C +C FC R V VL Sbjct: 132 PEDKFEELKARPK---ARRAPS-AFLTVQEGCDKFCAFCVVPYTRGAEVSRPVTRVLDEA 187 Query: 130 D--TEAALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 E + I Q + G D + K L +++ L I ++ +RF + P Sbjct: 188 RDLVERGVREITLLGQNVNAYHGAGADG---NEKTLAQLIWALNDIDGLERIRFTTSHPN 244 >gi|91774915|ref|YP_544671.1| GTP cyclohydrolase subunit MoaA [Methylobacillus flagellatus KT] gi|91708902|gb|ABE48830.1| GTP cyclohydrolase subunit MoaA [Methylobacillus flagellatus KT] Length = 329 Score = 37.0 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 4/85 (4%) Query: 99 LKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C L+ ++ E + + + V TGG+PL+ Sbjct: 21 LSVTDRCDLRCHYCMPVGFSDYEIPDNWLTFEEIERVVNAFAK-LGVNAVRVTGGEPLLR 79 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHS 182 L ++ L I + + + Sbjct: 80 KD--LATLISNLSRINGLSDISLST 102 >gi|10639798|emb|CAC11770.1| coenzyme PQQ synthesis protein related protein [Thermoplasma acidophilum] Length = 401 Score = 37.0 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 37/189 (19%), Positives = 71/189 (37%), Gaps = 32/189 (16%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----VI 148 P I + C + C C ++ + + ++ ++ + + VI Sbjct: 41 KPLLIFWETTKACGLKCEHCRASAIL----DALPGEMTFDQSINFLSHIKEFGKPYPIVI 96 Query: 149 FTGGDPLILSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 TGGD +L R+ ++ LR I S P V + E I KE G Sbjct: 97 LTGGD--MLRKHRIWDIMDYLRSQEIPF-------SVSPAVT-DLLTHEAILKFKEFGVS 146 Query: 207 VYIAIHANHPYEFSEEAI----------AAISRLANAGIILLSQSVLLK-GINDDPEILA 255 ++I + E E+ AI L + GI + +V+++ ++D P +L Sbjct: 147 -SVSISLDGMREVHEKVRGVAGVYDDTVKAIEDLISTGISMQINTVVMRSTVHDLPHVLK 205 Query: 256 NLMRTFVEL 264 ++ V++ Sbjct: 206 LIIDKGVKV 214 >gi|56708793|ref|YP_164834.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Ruegeria pomeroyi DSS-3] gi|56680478|gb|AAV97143.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria pomeroyi DSS-3] Length = 462 Score = 37.0 bits (85), Expect = 5.0, Method: Composition-based stats. Identities = 23/119 (19%), Positives = 37/119 (31%), Gaps = 10/119 (8%) Query: 75 EDPIGDNNHSPLKGIVHRYPD-RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSK 129 D ++ LKG L + C +C FC R V +L Sbjct: 151 TDFPEEDKFEKLKGRPKAKRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRILREA 210 Query: 130 D--TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + E + I Q + G P L ++ L I ++ +RF + P Sbjct: 211 NELVERGVREITLLGQ-NVNAYHGAGP--NGDMTLAGLIWELDKIDGLERIRFTTSHPN 266 >gi|331003287|ref|ZP_08326791.1| hypothetical protein HMPREF0491_01653 [Lachnospiraceae oral taxon 107 str. F0167] gi|330412636|gb|EGG92020.1| hypothetical protein HMPREF0491_01653 [Lachnospiraceae oral taxon 107 str. F0167] Length = 714 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 14/79 (17%), Positives = 33/79 (41%), Gaps = 4/79 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-- 156 + C + C++C+ ++ S+ ++ + AL Y + + F GG+PL+ Sbjct: 23 FTVTQNCNLACKYCYEKKNNDSRMSIKVAKDAVDFALRY-GQHTNRARFDFMGGEPLLEI 81 Query: 157 -LSHKRLQKVLKTLRYIKH 174 + + + + L H Sbjct: 82 NMIDELMDYIKFKLYEENH 100 >gi|317484667|ref|ZP_07943568.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6] gi|316924023|gb|EFV45208.1| radical SAM superfamily protein [Bilophila wadsworthia 3_1_6] Length = 397 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 24/114 (21%), Positives = 44/114 (38%), Gaps = 23/114 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE--VIFTGGDPLI 156 ++ C + C+ C G LS+++ +A + + +IFTGGDP+I Sbjct: 55 WEVTRSCNLACKHCRAEAHPEPYPGE-LSTEEAKALIDTF---PSVGNPIIIFTGGDPMI 110 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVP--IVDPQ--RINPELIQCLKEAGKP 206 +++ S+ ++ P I PE + +KEAG Sbjct: 111 RPDVY--ELIAYA-----------GSKGLRCVMSPNGTLITPENARKIKEAGVQ 151 >gi|285808444|gb|ADC35970.1| conserved hypothetical protein [uncultured bacterium 98] Length = 358 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 35/191 (18%), Positives = 67/191 (35%), Gaps = 43/191 (22%) Query: 104 VCPVYCRFCF--RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 C + C FC + +V + ++ + A A V+ G+PL Sbjct: 112 GCAMACGFCLTGKMGLVRNLTAGEIAGQVRVLAAATGLADQAFNIVLMGMGEPLHNYDNT 171 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPEL------IQCLKEAGK--PVYIAIHA 213 ++ + + + +H + P+R+ ++ L + +++HA Sbjct: 172 MKAL--RMLHSEH---------GLSISPRRVTLSTVGIVPGLERLAREPLMPNLAVSLHA 220 Query: 214 NHPYEFSEEAIAAI----SRLANAGIILLSQS-------------VLLKGINDDPEILAN 256 ++E +A+ + A II Q VLL G+ND PE Sbjct: 221 T-----TDEQRSALVPPNRKYPLADIIAACQRFPLKQRSRITFEYVLLDGVNDSPEDARR 275 Query: 257 LMRTFVELRIK 267 L+R +R K Sbjct: 276 LVRLLAGIRAK 286 >gi|298706473|emb|CBJ29460.1| conserved unknown protein [Ectocarpus siliculosus] Length = 369 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 6/103 (5%) Query: 77 PIGDNNH-SPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL 135 P +++ S G H Y + + L C + C +C + V Q + + ++ L Sbjct: 34 PGHEHSMLSDTHGRHHNY---LRISLTERCNLRCVYCMPEDGVDLQPQSKMINQQEILRL 90 Query: 136 AYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 A + + + ++ TGG+PL+ L +++ L ++ V+ + Sbjct: 91 ASMFVDAGVDKIRLTGGEPLVRKD--LPDIVRALSSLEGVRNV 131 >gi|297538387|ref|YP_003674156.1| coenzyme PQQ biosynthesis protein E [Methylotenera sp. 301] gi|297257734|gb|ADI29579.1| coenzyme PQQ biosynthesis protein E [Methylotenera sp. 301] Length = 409 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 18/92 (19%), Positives = 41/92 (44%), Gaps = 3/92 (3%) Query: 81 NNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE 140 N+ I P +L ++ + CP++C FC+ L+++ AL ++ Sbjct: 20 QNNGVAANITQTQPLWLLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARK 79 Query: 141 KSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 I ++ +GG+PL+ ++ ++ R + Sbjct: 80 MGAI-QLGISGGEPLLRDD--IEDIVIEARKL 108 >gi|281425800|ref|ZP_06256713.1| 2-methylthioadenine synthetase [Prevotella oris F0302] gi|281400061|gb|EFB30892.1| 2-methylthioadenine synthetase [Prevotella oris F0302] Length = 446 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 13/123 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R LK+ C +C +C G + ++S +A A + +I + TG + Sbjct: 153 RTRYFLKVQDGCNYFCTYCTIPYARGFSRNPSIASLVAQAEEAAAEGGKEI---VLTGVN 209 Query: 154 PLIL---SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 +H++ ++K L ++ ++ R S ++P I+ +LI E+ Sbjct: 210 IGHFGETTHEKFIDLVKALDKVEGIKRFRISS----LEPDLIDDDLIAFCAESR---AFM 262 Query: 211 IHA 213 H Sbjct: 263 PHF 265 >gi|258406367|ref|YP_003199109.1| Radical SAM domain-containing protein [Desulfohalobium retbaense DSM 5692] gi|257798594|gb|ACV69531.1| Radical SAM domain protein [Desulfohalobium retbaense DSM 5692] Length = 465 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 10/117 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P+ + CP C +C R + S E Y ++ + + F D Sbjct: 225 PEYAPILGSRGCPYGCEYCASRHLYSGFVQRSFESVWQEFRAQY---QAGVRDFAFY-DD 280 Query: 154 PLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDP-QRINPELIQCLKEAGKPVY 208 L+L L L + + + +R H+ P Q + PE+ + L AG Sbjct: 281 ALLLRPTTWLLPFLHQICELP--EPIRLHT--PNAMHVQALTPEVCRALFRAGLTTI 333 >gi|327440950|dbj|BAK17315.1| 2-methylthioadenine synthetase [Solibacillus silvestris StLB046] Length = 449 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 23/125 (18%), Positives = 45/125 (36%), Gaps = 13/125 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALA--YIQEKSQIWEVIF 149 R LK+ C +C FC G + + + + Y++ Sbjct: 147 RTRASLKIQEGCNNFCTFCIIPWARGLMRSRDPEEVIRQAQQLVDAGYLEIVLTGIHTGG 206 Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 G D L ++L+ L +K ++ LR S ++ ++ E+I L+ + V Sbjct: 207 YGQD---FKDYNLAQLLRDLEAQVKGLKRLRISS----IEASQLTDEVIDVLQNSEI-VV 258 Query: 209 IAIHA 213 +H Sbjct: 259 NHLHI 263 >gi|307822344|ref|ZP_07652576.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylobacter tundripaludum SV96] gi|307736910|gb|EFO07755.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Methylobacter tundripaludum SV96] Length = 438 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 21/126 (16%), Positives = 43/126 (34%), Gaps = 19/126 (15%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIFTGGD 153 + + ++ C YC FC V S+ + +A I K + E+ G + Sbjct: 135 KAFVSVMEGCSKYCTFC-----VVPYTRGEEISRPLDDVIAEITSLAKQGVREINLLGQN 189 Query: 154 P----LILSHKRLQK---VLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 + + +L + ++ + +RF + P ELI+ E Sbjct: 190 VNAYRGEMDDGDIADFALLLHYVAAVEGIDRIRFTTSH----PMEFTDELIEAFAEIP-Q 244 Query: 207 VYIAIH 212 + +H Sbjct: 245 LVDHLH 250 >gi|222102888|ref|YP_002539927.1| molybdenum cofactor biosynthesis protein A [Agrobacterium vitis S4] gi|221739489|gb|ACM40222.1| molybdenum cofactor biosynthesis protein A [Agrobacterium vitis S4] Length = 342 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%) Query: 88 GIVHRYPDRIL---LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA-ALAYIQEKSQ 143 G++ R+ R+ L + C + C +C M K VLS + E A+A+I+ Sbjct: 13 GLIDRFGRRVTYLRLSVTDRCDLRCMYCMPENMTFMPKRDVLSIDELERLAVAFIRS--G 70 Query: 144 IWEVIFTGGDPLI 156 + + TGG+PL+ Sbjct: 71 VTRIRLTGGEPLV 83 >gi|134278002|ref|ZP_01764717.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei 305] gi|226199930|ref|ZP_03795480.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia pseudomallei Pakistan 9] gi|254177591|ref|ZP_04884246.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei ATCC 10399] gi|254191326|ref|ZP_04897830.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei Pasteur 52237] gi|254195707|ref|ZP_04902133.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei S13] gi|254199311|ref|ZP_04905677.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei FMH] gi|254205625|ref|ZP_04911977.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei JHU] gi|254296954|ref|ZP_04964407.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei 406e] gi|134251652|gb|EBA51731.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei 305] gi|147748907|gb|EDK55981.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei FMH] gi|147753068|gb|EDK60133.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei JHU] gi|157808020|gb|EDO85190.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei 406e] gi|157938998|gb|EDO94668.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei Pasteur 52237] gi|160698630|gb|EDP88600.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei ATCC 10399] gi|169652452|gb|EDS85145.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei S13] gi|225927986|gb|EEH24023.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia pseudomallei Pakistan 9] Length = 227 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%) Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150 YP + + + CP C +C Q + + + +A LA++ + I V+F+ Sbjct: 12 YPGQFAAVVFVQGCPWRCGYC---HNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFS 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178 GG+P I L I V+ L Sbjct: 69 GGEPSI--DPALA------ASIDDVRRL 88 >gi|228476318|ref|ZP_04061019.1| conserved hypothetical protein [Staphylococcus hominis SK119] gi|314936068|ref|ZP_07843417.1| radical SAM superfamily domain protein [Staphylococcus hominis subsp. hominis C80] gi|228269601|gb|EEK11107.1| conserved hypothetical protein [Staphylococcus hominis SK119] gi|313655885|gb|EFS19628.1| radical SAM superfamily domain protein [Staphylococcus hominis subsp. hominis C80] Length = 381 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 16/137 (11%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + ++C + C C + ++ L L I + + TGG+P + Sbjct: 34 VEFTTTNLCNMRCSHCAVGYTLQTKDPDPLPMNLIYQRLDEI---PNLRTMSITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH- 215 S K + V+K L H + + + PQ E+ + + +H +H Sbjct: 90 FSKKSINNVVKPLLKYAHQRGIYVQMNSNLTLPQDRYLEIAEYID--------VMHISHN 141 Query: 216 ---PYEFSEEAIAAISR 229 EF+E A+ + Sbjct: 142 WGTIQEFAEVGFGAMKK 158 >gi|255659775|ref|ZP_05405184.1| RNA modification enzyme, MiaB family [Mitsuokella multacida DSM 20544] gi|260847845|gb|EEX67852.1| RNA modification enzyme, MiaB family [Mitsuokella multacida DSM 20544] Length = 455 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 29/164 (17%), Positives = 58/164 (35%), Gaps = 29/164 (17%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--IWEVIFTGGD 153 +K+ C C FC + G + S+ E ++ ++ + EV+ D Sbjct: 145 TAYVKIAEGCNNRCAFCAIPYIRGDYR-----SRRIEDICDEVRHLTENGVREVVLIAQD 199 Query: 154 PL-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207 + +L ++L+ + + +Q +R P+ + ELI+ + K Sbjct: 200 STEYGRDLYGAPKLSELLREIVKVPKLQWVR----TLYSYPKYFSDELIETIASEPKICK 255 Query: 208 YIAIHANHP-----YEF-----SEEAIAAISRLANA--GIILLS 239 Y+ + H EE A I +L G+ + S Sbjct: 256 YVDLPLQHAHDAVLRSMRRPDTQEEMRALIKKLRERIPGVTIRS 299 >gi|217420779|ref|ZP_03452284.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia pseudomallei 576] gi|217396191|gb|EEC36208.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia pseudomallei 576] Length = 227 Score = 36.6 bits (84), Expect = 5.1, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%) Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150 YP + + + CP C +C Q + + + +A LA++ + I V+F+ Sbjct: 12 YPGQFAAVVFVQGCPWRCGYC---HNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFS 68 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178 GG+P I L I V+ L Sbjct: 69 GGEPSI--DPALA------ASIDDVRRL 88 >gi|291549607|emb|CBL25869.1| Fe-S oxidoreductase [Ruminococcus torques L2-14] Length = 342 Score = 36.6 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 19/95 (20%) Query: 95 DRILLKLLHVCPVY-CRFC-------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 + ++L++ C C FC F R + + + D+E A Y Sbjct: 16 ESLMLRVTRGCHWNKCYFCDLYKKYKFSRRRYEEIEEDLKKAADSEYAQNY-------TT 68 Query: 147 VIFTGGDPLILSHKRLQKVLKT----LRYIKHVQI 177 GD +L + L ++L+ L IKHV Sbjct: 69 CFLQDGDAFVLRTEFLMQILEGIHKYLPNIKHVTT 103 >gi|242398860|ref|YP_002994284.1| molybdenum cofactor biosynthesis protein [Thermococcus sibiricus MM 739] gi|242265253|gb|ACS89935.1| molybdenum cofactor biosynthesis protein [Thermococcus sibiricus MM 739] Length = 586 Score = 36.6 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 33/177 (18%) Query: 91 HRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEV 147 HR +L + L + C + C +CF G Q + + L + + I V Sbjct: 133 HRSHTNLLNIVLTNRCNLSCWYCFFYHKEG-QPVYEPTLEQIRMMLRNAKSEEPIGANAV 191 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEA 203 FTGG+P + + H+Q +RF PEL++ ++EA Sbjct: 192 QFTGGEPSLRDDIIEIIKIAKEEGYDHIQFNTDGIRFA----------FEPELVKRVREA 241 Query: 204 GKPVYIAIHA----------NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 G + + NH E + + GI+L+ L++ +ND Sbjct: 242 GVNTFY-LSFDGVTPKTNWKNHW-EI-PLIFENVRKAGGPGIVLV--PTLIRNVNDH 293 >gi|320165712|gb|EFW42611.1| predicted protein [Capsaspora owczarzaki ATCC 30864] Length = 429 Score = 36.6 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 1/48 (2%) Query: 197 IQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVL 243 + L + P+ +A+H++ E E I A SRL + L +QS L Sbjct: 277 VNLLDQYNMSPLLVAVHSSASNEILAELIRAGSRLHDIHYTLDNQSPL 324 >gi|315586279|gb|ADU40660.1| possible 2-methylthioadenine synthase [Helicobacter pylori 35A] Length = 418 Score = 36.6 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 17/92 (18%), Positives = 34/92 (36%), Gaps = 6/92 (6%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C V + + K E + + EV+ TG + Sbjct: 133 KTRAFIKIQEGCDFDCNYCII-PSVRGRARSFEERKILEQVS--LLCSKGVQEVVLTGTN 189 Query: 154 PLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + + +++K L I ++ +R S Sbjct: 190 VGSYGKDKGSNIVRLIKKLSQIAGLKRIRIGS 221 >gi|283852881|ref|ZP_06370142.1| radical SAM enzyme, Cfr family [Desulfovibrio sp. FW1012B] gi|283571710|gb|EFC19709.1| radical SAM enzyme, Cfr family [Desulfovibrio sp. FW1012B] Length = 350 Score = 36.6 bits (84), Expect = 5.2, Method: Composition-based stats. Identities = 41/199 (20%), Positives = 69/199 (34%), Gaps = 41/199 (20%) Query: 96 RILLKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKS---QIWE 146 L C + C FC FRR M + A Y+ EK + Sbjct: 101 TACLSTQVGCAMGCAFCATGMMGFRRNMTPGEMLG-----QVLVARQYLLEKGVALALRN 155 Query: 147 VIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 ++F G G+PL+ ++KTL + H Q R V + L+ + Sbjct: 156 LVFMGMGEPLLNYDN----LVKTLEALHHPQGFDISGRRITVSTAGVARHLLDLGRTGLC 211 Query: 206 PVYIAIHANHPYEFSEEAIAAI----SRL-ANAGIILLSQSV------------LLKGIN 248 + +++HA ++ I ++L I +L Q +L G+N Sbjct: 212 SLAVSLHAP-----TQALREKIMPGAAKLPLGELIEILRQYPMKPRERLTFEYLMLDGVN 266 Query: 249 DDPEILANLMRTFVELRIK 267 D E L+R ++ K Sbjct: 267 DSLEDARELVRLLSRVKAK 285 >gi|300087524|ref|YP_003758046.1| MiaB-like tRNA modifying enzyme [Dehalogenimonas lykanthroporepellens BL-DC-9] gi|299527257|gb|ADJ25725.1| MiaB-like tRNA modifying enzyme [Dehalogenimonas lykanthroporepellens BL-DC-9] Length = 400 Score = 36.6 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 13/122 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +K+ C C +C V +K V K + A + + EV+ TG + Sbjct: 127 RTRSFIKIQDGCDYRCAYCI-VPTVRPRKSAVPVEKVIDEIRA--RRREGCREVVLTGTE 183 Query: 154 P--LILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 + L ++ + ++ LR S + P+ I PEL+ C + + Sbjct: 184 IGEYRTGNTALAGLIDAVLKETDIERLRISS----LQPREITPELMACWRNPR----MCR 235 Query: 212 HA 213 H Sbjct: 236 HF 237 >gi|317151835|ref|YP_004119883.1| Radical SAM domain-containing protein [Desulfovibrio aespoeensis Aspo-2] gi|316942086|gb|ADU61137.1| Radical SAM domain protein [Desulfovibrio aespoeensis Aspo-2] Length = 289 Score = 36.6 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 25/94 (26%), Positives = 38/94 (40%), Gaps = 14/94 (14%) Query: 95 DRILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI----QEKSQIWEVIF 149 D ILL++ C C FC G+ +G KD E + I + + V Sbjct: 15 DSILLQVTLGCSHGKCAFC------GAYQGKRFGIKDRETVVRDIAFAARHCRRQRRVFL 68 Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHS 182 GD +IL RL ++L +R + V R + Sbjct: 69 CDGDAMILPQPRLLEILADIRRELPWVT--RVGT 100 >gi|254429447|ref|ZP_05043154.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alcanivorax sp. DG881] gi|196195616|gb|EDX90575.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Alcanivorax sp. DG881] Length = 445 Score = 36.6 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 23/126 (18%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEVIF----- 149 + ++ C YC FC V S+ + L+ IQ + EV Sbjct: 149 AFVSIMEGCSKYCTFC-----VVPYTRGEEVSRPVQPVLSEIQHLADMGVREVNLLGQNV 203 Query: 150 -----TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQ---RINPELIQCLK 201 G D L L +++ +R I + +R+ + P+ ++ ++ + + Sbjct: 204 NAYQGVGADGDTLD---LADLIRLIRDIDGIDRIRYTTSHPVEFSDALIQVYEDVPELVS 260 Query: 202 EAGKPV 207 PV Sbjct: 261 HLHLPV 266 >gi|94264953|ref|ZP_01288725.1| Radical SAM [delta proteobacterium MLMS-1] gi|93454609|gb|EAT04884.1| Radical SAM [delta proteobacterium MLMS-1] Length = 358 Score = 36.6 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 5/89 (5%) Query: 77 PIGDNNHSPLKGIVHRYPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA 134 P+ +++ + P + LL C + CR C+ ++ + + Sbjct: 4 PMNEHHPQQSPRTLFFKPGERNVFFHLLTACNLSCRHCYIN--PDQHGRATVTRAEIDHW 61 Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 LA + Q V+F GG+P L + L Sbjct: 62 LARLAAPEQQSNVVFLGGEP-SLHPELLH 89 >gi|78187582|ref|YP_375625.1| MiaB-like tRNA modifying enzyme [Chlorobium luteolum DSM 273] gi|78167484|gb|ABB24582.1| MiaB-like tRNA modifying enzyme [Chlorobium luteolum DSM 273] Length = 438 Score = 36.6 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 24/144 (16%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R LK+ C C +C R + VL A Y E++ Sbjct: 147 RTRAFLKIQDGCDYLCAYCTIPLARGRSRSIEPEDVLRQAHRLAGSGY-------REIVL 199 Query: 150 TG---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 +G GD +L+ L + V +R S ++P ++P +Q + + + Sbjct: 200 SGVNTGDYRSGGVDF-PALLRMLEEVP-VSRIRISS----LEPDMLSPAFLQVVGSSAR- 252 Query: 207 VYIAIHANHP-YEFSEEAIAAISR 229 I H + P S+ + A+ R Sbjct: 253 --IVPHFHLPLQSGSDPVLRAMRR 274 >gi|15678994|ref|NP_276111.1| pyruvate formate-lyase activating enzyme related protein [Methanothermobacter thermautotrophicus str. Delta H] gi|2622075|gb|AAB85472.1| pyruvate formate-lyase activating enzyme related protein [Methanothermobacter thermautotrophicus str. Delta H] Length = 304 Score = 36.6 bits (84), Expect = 5.3, Method: Composition-based stats. Identities = 16/73 (21%), Positives = 35/73 (47%), Gaps = 7/73 (9%) Query: 105 CPVYCRFC--FRREMVGS----QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 CP C +C +R +G V + + + A+ I+ +I + FTGG+P + Sbjct: 52 CPFRCAYCNAYRISQYPHSGWIYRGHVEAEELADEAITAIKSHERISNISFTGGEP-SIH 110 Query: 159 HKRLQKVLKTLRY 171 ++++++ +R Sbjct: 111 TPYIEELVRRVRE 123 >gi|317476990|ref|ZP_07936232.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides eggerthii 1_2_48FAA] gi|316906783|gb|EFV28495.1| MiaB-like tRNA modifying enzyme YliG [Bacteroides eggerthii 1_2_48FAA] Length = 432 Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 44/115 (38%), Gaps = 14/115 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI--QEKSQIW----EVIFT 150 LK+ C C +C + G + ++ + Y+ + + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHISRPI--EEILDEVRYLVTRGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D + + L ++++ + + V+ +R H P P +L + ++E Sbjct: 196 GVD--LYKKQMLPELIERISDVPGVEWIRLHYAYPAHFPM----DLFRVMRERSN 244 >gi|288926974|ref|ZP_06420870.1| 2-methylthioadenine synthetase [Prevotella buccae D17] gi|288336257|gb|EFC74642.1| 2-methylthioadenine synthetase [Prevotella buccae D17] Length = 275 Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 20/118 (16%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ---------IWEV 147 LK+ C +C +C M G + + L ++E E+ Sbjct: 138 AYLKIAEGCDRHCAYCAIPLMTGRHVSRPM-----DEILDEVRELVAGGVKEFQVIAQEL 192 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + G D + H + +++ + I V+ +R H P P +L+ ++E Sbjct: 193 TYYGID--LDGHHHIAELISRMADIPGVKWIRLHYAYPNQFPM----DLLDVMRERPN 244 >gi|167581236|ref|ZP_02374110.1| radical SAM domain protein [Burkholderia thailandensis TXDOH] Length = 239 Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 7/82 (8%) Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150 YP + + + CP C +C Q + + + +A LA++ + I V+F+ Sbjct: 24 YPGQLAAVVFVQGCPWRCGYC---HNPHLQPRSRPAEIEWDALLAFLARRVGLIDAVVFS 80 Query: 151 GGDPLILSHKRLQKVLKTLRYI 172 GG+P I L + +R + Sbjct: 81 GGEPSI--DPALAAAIDDVRRL 100 >gi|320538377|ref|ZP_08038252.1| MiaB-like tRNA modifying enzyme [Treponema phagedenis F0421] gi|320144762|gb|EFW36503.1| MiaB-like tRNA modifying enzyme [Treponema phagedenis F0421] Length = 454 Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 19/127 (14%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 + R LK+ C C +C R + ++ ++ A A E E++ +G Sbjct: 167 LFHSRATLKIQDGCNSACAYC-RIRFARGKSVSLPVTEVIRRAQA--IEDEGFAELVLSG 223 Query: 152 GDPLILSH-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 + LS K VL+ L + + H R+ + P+ I P ++ + Sbjct: 224 ---VNLSQYKSEGKNFADVLQQLLD----ETKKIHIRISSLYPESITPTFLKVAENPR-- 274 Query: 207 VYIAIHA 213 IA H Sbjct: 275 --IAPHF 279 >gi|209525671|ref|ZP_03274208.1| RNA modification enzyme, MiaB family [Arthrospira maxima CS-328] gi|209493840|gb|EDZ94158.1| RNA modification enzyme, MiaB family [Arthrospira maxima CS-328] Length = 436 Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 21/146 (14%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW----EVIF 149 + +++ C C +C + G+++ + A + + ++ + Sbjct: 132 TAWVNVIYGCNERCTYCVVPNVRGTEQSRTP--EAIRAEMEELARAGYKEVTLLGQNIDA 189 Query: 150 TGGD-PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G D P R L +L + I ++ +RF + P LI+ E Sbjct: 190 YGRDLPGSTPDGRHQHTLTDLLYYVHDIPGIERIRFATSHPRY----FTERLIRACAELP 245 Query: 205 KPVYIAIHANHP-YEFSEEAIAAISR 229 K + H + P + + A++R Sbjct: 246 K---VCEHFHIPFQSGDNDVLKAMAR 268 >gi|195473019|ref|XP_002088794.1| GE18764 [Drosophila yakuba] gi|194174895|gb|EDW88506.1| GE18764 [Drosophila yakuba] Length = 255 Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 14/63 (22%) Query: 217 YEFSEEAIAAISRLANAGIILLSQSVLLKGI-NDDPEILANLMRTFVELRIKPYYLHHPD 275 E + A+ A+ RL ++G VL+K + N + A L + D Sbjct: 18 DEPTPNAVEALKRLRDSG-------VLVKFVTNTTKDSKATLHERLCRIG------FQLD 64 Query: 276 LAA 278 + Sbjct: 65 PSE 67 >gi|157964955|ref|YP_001499779.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia massiliae MTU5] gi|229890633|sp|A8F2U6|MIAB_RICM5 RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|157844731|gb|ABV85232.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rickettsia massiliae MTU5] Length = 450 Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 30/128 (23%) Query: 76 DPIGDNNHSPLKGIVHRYP--DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEA 133 D + + L YP + + C +C FC V S++ E Sbjct: 134 DFVEEAKFDQLP--EQLYPQGTSAFISVQEGCDKFCTFC-----VVPYTRGAEFSRNVEQ 186 Query: 134 ALAYIQEKSQIWEVIFTGGDPLIL------------SHKR---LQKVLKTLRYIKHVQIL 178 + +V+ +G ++L + L +LK L I +++ L Sbjct: 187 VYR------EALKVVSSGAKEIMLLGQNVNAYHGKGPADKIFSLADLLKHLAQIPNLERL 240 Query: 179 RFHSRVPI 186 R+ + PI Sbjct: 241 RYITSHPI 248 >gi|119897481|ref|YP_932694.1| pyrroloquinoline quinone biosynthesis protein PqqE [Azoarcus sp. BH72] gi|119669894|emb|CAL93807.1| pyrroloquinoline quinone synthesis protein E [Azoarcus sp. BH72] Length = 384 Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 39/76 (51%), Gaps = 4/76 (5%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L ++ + CP++C FC+ + ++ T LS++D L + + + F+GG+PL+ Sbjct: 19 LLAEVTYRCPLHCAFCY-NPVDFARDDTELSTEDWLRVLREARAAGSV-QCGFSGGEPLM 76 Query: 157 LSHKRLQKVLKTLRYI 172 L+ ++ + Sbjct: 77 RDD--LEVLVAEAHRL 90 >gi|83720018|ref|YP_442340.1| radical SAM domain-containing protein [Burkholderia thailandensis E264] gi|167619323|ref|ZP_02387954.1| radical SAM domain protein [Burkholderia thailandensis Bt4] gi|257138539|ref|ZP_05586801.1| radical SAM domain-containing protein [Burkholderia thailandensis E264] gi|83653843|gb|ABC37906.1| radical SAM domain protein [Burkholderia thailandensis E264] Length = 239 Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 19/82 (23%), Positives = 36/82 (43%), Gaps = 7/82 (8%) Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150 YP + + + CP C +C Q + + + +A LA++ + I V+F+ Sbjct: 24 YPGQLAAVVFVQGCPWRCGYC---HNPHLQPRSRPAEIEWDALLAFLARRVGLIDAVVFS 80 Query: 151 GGDPLILSHKRLQKVLKTLRYI 172 GG+P I L + +R + Sbjct: 81 GGEPSI--DPALAAAIDDVRRL 100 >gi|99080026|ref|YP_612180.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria sp. TM1040] gi|123077818|sp|Q1GK98|MIAB_SILST RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|99036306|gb|ABF62918.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Ruegeria sp. TM1040] Length = 440 Score = 36.6 bits (84), Expect = 5.4, Method: Composition-based stats. Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 13/110 (11%) Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIF 149 L + C +C FC R V VL + E + I Q + Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPVDRVLREAEDLVERGVREITLLGQ-NVNAY 208 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 G P L +++ L I ++ +RF + P + +LI+ Sbjct: 209 HGAGP--NGDMTLAQLIWELDKIDGLERIRFTTSHPND----MMDDLIEA 252 >gi|308371235|ref|ZP_07424286.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu003] gi|308329484|gb|EFP18335.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu003] Length = 334 Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L ++ C + CR+C + +LS K+ A + + +V TGG+PLI Sbjct: 6 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 64 Query: 158 SHKRLQKVLKTLRY 171 L ++++TL Sbjct: 65 PD--LPEIVRTLSA 76 >gi|304437669|ref|ZP_07397621.1| MiaB family tRNA modification enzyme [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304369302|gb|EFM22975.1| MiaB family tRNA modification enzyme [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 429 Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 18/110 (16%) Query: 82 NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS--SKDTEAALAYIQ 139 PL G+ HR R LK+ C +C FC G K L+ +++ E A Sbjct: 131 EDIPLHGVPHR--TRAFLKIEDGCQNFCSFCIIPYARGPVKSRPLAAVAREMEKLAA--- 185 Query: 140 EKSQIWEVIFT-------GGDPLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + EV+ T G D + L +T K V+ LR S Sbjct: 186 --AGFREVVLTGIHLGAYGID--LPQRPTLADACRTALRTKEVRRLRLGS 231 >gi|284050979|ref|ZP_06381189.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Arthrospira platensis str. Paraca] Length = 452 Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 21/146 (14%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW----EVIF 149 + +++ C C +C + G+++ + A + + ++ + Sbjct: 148 TAWVNVIYGCNERCTYCVVPNVRGTEQSRTP--EAIRAEMEELARAGYKEVTLLGQNIDA 205 Query: 150 TGGD-PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G D P R L +L + I ++ +RF + P LI+ E Sbjct: 206 YGRDLPGSTPDGRHQHTLTDLLYYVHDIPGIERIRFATSHPRY----FTERLIRACAELP 261 Query: 205 KPVYIAIHANHP-YEFSEEAIAAISR 229 K + H + P + + A++R Sbjct: 262 K---VCEHFHIPFQSGDNDVLKAMAR 284 >gi|237737580|ref|ZP_04568061.1| thiamine biosynthesis protein ThiH [Fusobacterium mortiferum ATCC 9817] gi|229419460|gb|EEO34507.1| thiamine biosynthesis protein ThiH [Fusobacterium mortiferum ATCC 9817] Length = 471 Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 13/86 (15%), Positives = 34/86 (39%), Gaps = 4/86 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + + C C +C + L+ ++ + +++ V+ G DP+ S Sbjct: 92 LYVSNYCVNNCVYCGYQHCNEDLNRKKLTREELVNEVKALEKLGHKRIVLEAGEDPINCS 151 Query: 159 HKRLQKVLKTLRYIK----HVQILRF 180 + + +K + IK +++ + Sbjct: 152 LDYILQCIKDIYSIKFENGNIRRINI 177 >gi|218264182|ref|ZP_03478066.1| hypothetical protein PRABACTJOHN_03756 [Parabacteroides johnsonii DSM 18315] gi|218222228|gb|EEC94878.1| hypothetical protein PRABACTJOHN_03756 [Parabacteroides johnsonii DSM 18315] Length = 293 Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 17/133 (12%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTE--AALAYIQEKSQIWEVIFTGG 152 +++ + + + C C FC G +KG S + L QI E+ F+GG Sbjct: 7 NKLRILVTNKCNYQCPFC---HNEGQEKGVKFSMMSFDSFKMLIDFLNDQQISEINFSGG 63 Query: 153 DPLILSHKRLQKVLKTLRYIK-HVQ-ILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 +P + ++++K + Y H++ + + + I E I LK I Sbjct: 64 EPFLH-----KEIVKMICYADQHMKCDISCATNL-----SLITDEQIDILKGTRVKFNIQ 113 Query: 211 IHANHPYEFSEEA 223 EFS+ Sbjct: 114 FPFISEKEFSKST 126 >gi|182439559|ref|YP_001827278.1| hypothetical protein SGR_5766 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178468075|dbj|BAG22595.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 779 Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 26/129 (20%), Positives = 51/129 (39%), Gaps = 24/129 (18%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT---EAALAY----IQEKSQIW----- 145 +LK+ C + C C+ V S++ + A+++ + E + Sbjct: 12 VLKVHSRCDLACDHCY----VYEHADQSWSTRPRTISDEAISWTARRLAEHATTHALPSV 67 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH---VQILRFHSRVPIVDPQRINPELIQCLKE 202 VI GG+PL+ RL++V + L + LR H+ +++P + E Sbjct: 68 TVILHGGEPLLAGPARLRRVCEELGSALNGIAELDLRIHTNGV-----QLSPRYLDLFDE 122 Query: 203 AGKPVYIAI 211 V I++ Sbjct: 123 FHVRVGISL 131 >gi|167969718|ref|ZP_02551995.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis H37Ra] gi|215405104|ref|ZP_03417285.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis 02_1987] gi|215432065|ref|ZP_03429984.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis EAS054] gi|218754879|ref|ZP_03533675.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis GM 1503] gi|219559151|ref|ZP_03538227.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis T17] gi|254552189|ref|ZP_05142636.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis '98-R604 INH-RIF-EM'] gi|308374774|ref|ZP_07437356.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu006] gi|308340798|gb|EFP29649.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu006] Length = 335 Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L ++ C + CR+C + +LS K+ A + + +V TGG+PLI Sbjct: 7 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 65 Query: 158 SHKRLQKVLKTLRY 171 L ++++TL Sbjct: 66 PD--LPEIVRTLSA 77 >gi|332975771|gb|EGK12652.1| tRNA-I(6)A37 thiotransferase enzyme MiaB [Desmospora sp. 8437] Length = 448 Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 46/123 (37%), Gaps = 10/123 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEV-IFT 150 R LK+ C +C FC G + S + + +I I T Sbjct: 142 RTRASLKIQEGCNNFCTFCIIPWARGLLRSRKPESVLRQARQLVD--AGYKEIVLTGIHT 199 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 GG +L +L L ++ ++ +R S ++ +I+ +I L ++ K + Sbjct: 200 GGYGEDFEDYKLADLLWDLDKVEGLKRIRISS----IEASQIDDRVIDVLNKSDK-MCRH 254 Query: 211 IHA 213 +H Sbjct: 255 LHI 257 >gi|227824689|ref|ZP_03989521.1| RNA modification enzyme [Acidaminococcus sp. D21] gi|226905188|gb|EEH91106.1| RNA modification enzyme [Acidaminococcus sp. D21] Length = 435 Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 35/196 (17%), Positives = 63/196 (32%), Gaps = 45/196 (22%) Query: 61 IPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGS 120 +P E L +D DR LK+ C YC +C G Sbjct: 128 LPVGSEFEDLAASVDDS----------------RDRAFLKIQEGCDQYCSYCIIPYARGH 171 Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFT------GGDPLILSHKRLQKVLKTLRYIKH 174 + LSS + ++ E+ V+ G + + +RL + + Sbjct: 172 LRSRPLSS--IRREVEHLTEEGYKEVVLLGIHLGCYGKE--TANGERLSDAVSAALSVPA 227 Query: 175 VQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA-------------NHPYEFSE 221 + LR S + + PEL++ ++E + +H N PY+ + Sbjct: 228 LCRLRLGSLESV----EVQPELLRLMQEDPR-FCCHLHLPLQSGCDKILKAMNRPYD-TA 281 Query: 222 EAIAAISRLANAGIIL 237 I R+ A + Sbjct: 282 RFKELIDRIRAAVPDV 297 >gi|206895115|ref|YP_002246513.1| tungsten-containing aldehyde ferredoxin oxidoreductase cofactor-modifying protein [Coprothermobacter proteolyticus DSM 5265] gi|206737732|gb|ACI16810.1| tungsten-containing aldehyde ferredoxin oxidoreductase cofactor-modifying protein [Coprothermobacter proteolyticus DSM 5265] Length = 356 Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 41/186 (22%), Positives = 67/186 (36%), Gaps = 32/186 (17%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 RI ++L C + C CFR ++ K + L + +I G+PL Sbjct: 21 RIYVELSRACNLACAMCFR-HTYEDHTRALMDEKTVQKMLQEVVNSPAEEVIIGGIGEPL 79 Query: 156 ILSHKRLQKVLKTLR-YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAI-- 211 + + V+K L+ K V I + IN E+ + L + VYI++ Sbjct: 80 MHP--LWKNVVKELKNAYKRVTITTNGT--------LINREVAEFLVDQRVDEVYISVES 129 Query: 212 ----HANHPYEFSEEAIAAISRLANAG----IILLSQSVLLKG--INDDPEILANLMRTF 261 H N E + I+ L IL ++ VL K + D LM+ Sbjct: 130 SPLGHNN--VENTFAVGDLITELKQRKNKMRPILSAEVVLTKSSLVED-----LELMKKL 182 Query: 262 VELRIK 267 I+ Sbjct: 183 SRHGIR 188 >gi|218295831|ref|ZP_03496611.1| radical SAM enzyme, Cfr family [Thermus aquaticus Y51MC23] gi|218243569|gb|EED10097.1| radical SAM enzyme, Cfr family [Thermus aquaticus Y51MC23] Length = 349 Score = 36.6 bits (84), Expect = 5.5, Method: Composition-based stats. Identities = 39/201 (19%), Positives = 69/201 (34%), Gaps = 51/201 (25%) Query: 93 YPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIW 145 Y +R + L + CP C FC + G L++ + + L I +I Sbjct: 89 YKNRKTVCLSSMVGCPAGCTFCATGAL---GFGRNLTAAEILSQLLAIAHHQGLSPREIR 145 Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--- 201 V+ G G+PL+ L+ + + H + + P+RI + + Sbjct: 146 NVVLMGMGEPLLNLTNVLKAI-----------RVMLHPKALAMSPRRITLSTVGIPRGIL 194 Query: 202 -----EAGKPVYIAIHA------------NHPY---EFSEEAIAAISRLANAGIILLSQS 241 + G + +++HA H Y E R + Sbjct: 195 RLAEEDVGVRLALSLHAPDDETRRKIIPTAHRYPIAEIMAAVRRYYERTKRRVTFEYT-- 252 Query: 242 VLLKGINDD---PEILANLMR 259 LLKG+ND +LA L++ Sbjct: 253 -LLKGLNDHLWQARLLAKLLK 272 >gi|315923957|ref|ZP_07920185.1| radical SAM domain protein [Pseudoramibacter alactolyticus ATCC 23263] gi|315622797|gb|EFV02750.1| radical SAM domain protein [Pseudoramibacter alactolyticus ATCC 23263] Length = 354 Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 4/79 (5%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R L++ ++C CR+C R G + L++++ A V+ +G D Sbjct: 61 RGLIEFSNICRNDCRYCGIRRSNGRIERYRLTAEEILACCDQGYALGFRTFVLQSGEDTY 120 Query: 156 ILSHKRLQKVLKTLRYIKH 174 + L ++ IKH Sbjct: 121 Y-TDDALCALVAR---IKH 135 >gi|255011120|ref|ZP_05283246.1| putative anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides fragilis 3_1_12] gi|313148931|ref|ZP_07811124.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides fragilis 3_1_12] gi|313137698|gb|EFR55058.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Bacteroides fragilis 3_1_12] Length = 154 Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 22/59 (37%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRL 162 C C C E Q G L+ K + + I + V F+GGDPL L Sbjct: 25 GCRHGCPGCHNPESWNPQAGDELTEKRLDCIIREINSNPLLDGVTFSGGDPLYNPEAFL 83 >gi|257792682|ref|YP_003183288.1| Radical SAM domain-containing protein [Eggerthella lenta DSM 2243] gi|257476579|gb|ACV56899.1| Radical SAM domain protein [Eggerthella lenta DSM 2243] Length = 475 Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 15/117 (12%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ--EKSQIWEV 147 +R+ + C CR C S L D + + + I EV Sbjct: 90 QNRFVRTAHWSITGKCNYRCRHC-----YMSAPDAKLGEIDHDTMMDLARQIADCGILEV 144 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 TGG+PL+ +++ L +R + + ++ +L+ L+E G Sbjct: 145 SLTGGEPLVRRDFM--ELVDALLSY----RIRIA--QIYTNGKLVDEKLLDQLEERG 193 >gi|189423541|ref|YP_001950718.1| radical SAM protein [Geobacter lovleyi SZ] gi|189419800|gb|ACD94198.1| Radical SAM domain protein [Geobacter lovleyi SZ] Length = 828 Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 35/184 (19%), Positives = 66/184 (35%), Gaps = 34/184 (18%) Query: 56 IARQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRR 115 + R+F+P E D SP+ + DR+ +++ C CRFC Sbjct: 224 VRRRFLPDIE------------AADFPDSPIIPFLKTIHDRVAIEVARGCTRGCRFCQAG 271 Query: 116 EMVGSQKGTVLSSKDTEAALAYIQEK---SQIWEVIFTGGDPLILSHKRLQKVLKTLRYI 172 + + S + + + +I + + GD + +L+ L Sbjct: 272 YIYRPLRER--SPQRINELIETSLKNTGYEEISLLSLSTGDY-----SCIAPLLQELMA- 323 Query: 173 KHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEA-IAAISRLA 231 +H Q R +P + + PELI +++ K + + EA + R+ Sbjct: 324 RHAQG-RVAVSLPSLRVGTLTPELIDEIRKVRKTGFT---------LAPEAGSERMRRVI 373 Query: 232 NAGI 235 N GI Sbjct: 374 NKGI 377 >gi|253989291|ref|YP_003040647.1| hypothetical protein PAU_01811 [Photorhabdus asymbiotica subsp. asymbiotica ATCC 43949] gi|253780741|emb|CAQ83903.1| conserved hypothetical protein [Photorhabdus asymbiotica] Length = 353 Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 12/78 (15%), Positives = 29/78 (37%), Gaps = 9/78 (11%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYI----QEKSQIWEV 147 +YP+ + + C C+ C +V + + +I + V Sbjct: 11 KYPNTATVITTYTCNAACKECC-----FECNPSVKARLSLDEIKQFIVHSKANFPGLKLV 65 Query: 148 IFTGGDPLILSHKRLQKV 165 +F+GG+ +L ++ + Sbjct: 66 VFSGGECFLLGKDLIEAI 83 >gi|325968827|ref|YP_004245019.1| radical SAM protein [Vulcanisaeta moutnovskia 768-28] gi|323708030|gb|ADY01517.1| Radical SAM domain protein [Vulcanisaeta moutnovskia 768-28] Length = 380 Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 11/124 (8%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI- 148 + P + + CP+ CR C R + T LS+++++ + + + + V+ Sbjct: 14 LEEKPLLVFYETTKACPLACRHC-RANALLKPLPTELSTEESKRFIEDLTGFGKPYPVLI 72 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPV 207 TGGDPL L+ I H + L + P V + +N +L++ L+E + Sbjct: 73 LTGGDPLT-RDDILE-------LIDHAKSLGIPVALSPAVSTKLLNDDLLKELRERVNSI 124 Query: 208 YIAI 211 I++ Sbjct: 125 SISL 128 >gi|319795394|ref|YP_004157034.1| radical SAM protein [Variovorax paradoxus EPS] gi|315597857|gb|ADU38923.1| Radical SAM domain protein [Variovorax paradoxus EPS] Length = 212 Score = 36.6 bits (84), Expect = 5.6, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 34/95 (35%), Gaps = 15/95 (15%) Query: 106 PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-----KSQIWEVIFTGGDPLILSHK 160 CRFC + VG+ K + I ++ V+ TGG+PL+ Sbjct: 43 SAVCRFCD-TDFVGTDGTLGGKFKTADQLADTIAAQWPANDAEHRLVVLTGGEPLLQVD- 100 Query: 161 RLQKVLKTLRYIKHVQILRFH--SRVPIVDPQRIN 193 ++ L H + R S + P+ I+ Sbjct: 101 --AALVDAL----HARRFRIAVESNGTVAAPEGID 129 >gi|310643698|ref|YP_003948456.1| astb/chur/nirj-like protein [Paenibacillus polymyxa SC2] gi|309248648|gb|ADO58215.1| AstB/chuR/nirj-like protein [Paenibacillus polymyxa SC2] Length = 397 Score = 36.6 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 16/83 (19%), Positives = 34/83 (40%), Gaps = 7/83 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEVIF 149 P I +KL + C + C CF G ++ + A +++ ++ ++ Sbjct: 42 PQTIGIKLTNRCNLRCTHCFEWNEEGYHHQMDKEEQNMDLAPDMLRQILSETKEVKSRLY 101 Query: 150 T-GGDPLILSHKRLQKVLKTLRY 171 GG+P+ +R ++L L Sbjct: 102 MWGGEPMFH--RRFDEILDVLAE 122 >gi|302533615|ref|ZP_07285957.1| radical SAM domain-containing protein [Streptomyces sp. C] gi|302442510|gb|EFL14326.1| radical SAM domain-containing protein [Streptomyces sp. C] Length = 751 Score = 36.6 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 38/188 (20%), Positives = 67/188 (35%), Gaps = 35/188 (18%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQ---KGTVLSSKDTEAALAYIQEK------SQIWEV 147 I+LK+ C + C C+ E + V+S + + + E + V Sbjct: 10 IVLKVHSRCDLACDHCYVYEHADQSWRARPKVISPEVISQTASRLAEHARDHALPSVT-V 68 Query: 148 IFTGGDPLILSHKRL----QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I GG+PL+ RL ++ + L + LR H+ +++ + E Sbjct: 69 ILHGGEPLLAGPDRLRLVCEEFTRALAGTAGLD-LRIHTNGL-----QLSRRYLDLFAEY 122 Query: 204 GKPVYIAI---------H--ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI---ND 249 G V +++ H +AA+ L +A L Q LL + ND Sbjct: 123 GVRVGVSLDGDRAANDRHRRFADGRSSHPLVLAALELLRSAPYRHLYQG-LLCTVDVAND 181 Query: 250 DPEILANL 257 +L L Sbjct: 182 PVAVLDAL 189 >gi|225387767|ref|ZP_03757531.1| hypothetical protein CLOSTASPAR_01537 [Clostridium asparagiforme DSM 15981] gi|225046128|gb|EEG56374.1| hypothetical protein CLOSTASPAR_01537 [Clostridium asparagiforme DSM 15981] Length = 491 Score = 36.6 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 30/176 (17%), Positives = 55/176 (31%), Gaps = 45/176 (25%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R +K+ C +C +C R + + VL T AA Y + + Sbjct: 143 RTRAFIKVQDGCNQFCSYCIIPYARGRVRSRRPEEVLEEVRTLAAQGYKEMVLTGIHLSS 202 Query: 150 TGGD------PLILSHKR----------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRIN 193 G D LI + L ++++ + ++ + +R S ++P+ I Sbjct: 203 YGLDFENPESALIAGDYKAEENALYRPWLLRLIQEVSGVEGIGRIRLGS----LEPRIIT 258 Query: 194 PELIQCLKEAGK-----PVY-----------IAIHANHPYEFSEEAIAAISRLANA 233 E L + K + + H N +EE L A Sbjct: 259 REFAAELAKIPKLCPHFHLSLQSGCDATLKRMNRHYN-----TEEYRERCGILREA 309 >gi|296274304|ref|YP_003656935.1| coenzyme PQQ biosynthesis protein E [Arcobacter nitrofigilis DSM 7299] gi|296098478|gb|ADG94428.1| coenzyme PQQ biosynthesis protein E [Arcobacter nitrofigilis DSM 7299] Length = 368 Score = 36.6 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 17/76 (22%), Positives = 40/76 (52%), Gaps = 4/76 (5%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 LL+L H CP+ C +C+ + + K + ++ +D + + + ++ F+GG+PL+ Sbjct: 12 LLELTHKCPLECTYCYNQLDFANTKDS-MTKEDWFRVMEEARAMGAV-QLGFSGGEPLLN 69 Query: 158 SHKRLQKVLKTLRYIK 173 + +++K +K Sbjct: 70 KD--ILEIVKKAAELK 83 >gi|162447121|ref|YP_001620253.1| radical SAM superfamily Fe-S oxidoreductase [Acholeplasma laidlawii PG-8A] gi|205829657|sp|A9NEU7|RLMN_ACHLI RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|161985228|gb|ABX80877.1| Fe-S-cluster redox enzyme, radical SAM superfamily [Acholeplasma laidlawii PG-8A] Length = 338 Score = 36.6 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 39/246 (15%), Positives = 81/246 (32%), Gaps = 60/246 (24%) Query: 89 IVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAA---LAYIQEKSQ-- 143 + H Y + C + C FC G + +D A I+ + + Sbjct: 93 MSHNYGMSACVTTQVGCNIGCSFC--------ASGVLKKKRDLTAGEIVAQIIRAEKESG 144 Query: 144 --IWEVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 + ++ G G+P + +K + + H + L +R V L+ + Sbjct: 145 VRVSSIVIMGIGEPF----DNYKNFVKFISIVNHPKGLAIGARHITVS----TSGLVPKI 196 Query: 201 KEAGK-----PVYIAIHANHPYEFSEEAIAAISRLANAG------------IILLSQSVL 243 KE + +++HA P E + + ++ + I + ++ V Sbjct: 197 KEFAHLGIQVNLAVSLHA--PN---NEIRSKLMKINDRFKVEEVVDAIKYYIHVTNRRVT 251 Query: 244 LKGI-----NDDPEILANLMRTFVELRI----KPYYLHHPDLAAGTSHFRLTIEEGQKIV 294 ++ I ND E L + + + PY + + R ++E Sbjct: 252 IEYIMIQDLNDSVETAVELAKLLKGMNVYVNLIPY-----NTVKEADYQRSSLENRLAFH 306 Query: 295 ASLKEK 300 +LKE Sbjct: 307 KTLKEH 312 >gi|39935047|ref|NP_947323.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas palustris CGA009] gi|123773347|sp|Q3V7S1|MOAA_RHOPA RecName: Full=Molybdenum cofactor biosynthesis protein A gi|39648898|emb|CAE27419.1| molybdenum biosynthetic protein A [Rhodopseudomonas palustris CGA009] Length = 344 Score = 36.6 bits (84), Expect = 5.7, Method: Composition-based stats. Identities = 33/168 (19%), Positives = 67/168 (39%), Gaps = 29/168 (17%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C +M + +L+ ++ + + + ++ TGG+PL+ Sbjct: 29 VSITDRCDFRCVYCMAEDMTFLPRADLLTLEELDRLCSAFIA-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLRYIKHVQI-----LRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + + ++++L H++ L S++ R EL C + V ++ Sbjct: 86 RRNMMSLVRSLSR--HLKTGALDELTLTTNGSQL-----ARFAAELADC---GVRRVNVS 135 Query: 211 IHANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGINDD 250 + P EF A I AG+ + SV+LKG N+D Sbjct: 136 LDTLDPDEFRRITRWGDLERVLAGIDAARTAGLAVKINSVVLKGSNED 183 >gi|313203239|ref|YP_004041896.1| hypothetical protein Palpr_0757 [Paludibacter propionicigenes WB4] gi|312442555|gb|ADQ78911.1| conserved hypothetical protein [Paludibacter propionicigenes WB4] Length = 318 Score = 36.6 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 39/110 (35%), Gaps = 16/110 (14%) Query: 109 CRFCFRREMVGSQ-KGTVLSSKDTEAALAYIQEKSQIWEVIF------TGGDPLILSHKR 161 C +C + K S+ E + + + K + + D L + Sbjct: 53 CTYCNNQSFSPEYCKPIKTVSQQVEEGINFFKHKYENQFYLAYFQSYTNTYDSL----DK 108 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 L+ + + V+ + +R P +N EL+ +E K VY+ I Sbjct: 109 LKAIYEEALSHPQVKGIVVGTR-----PDCVNDELLDYFEELSKSVYVMI 153 >gi|61845111|emb|CAI70376.1| beta 1,4 N-acetylglucosaminyltransferase [Populus tremula x Populus alba] Length = 388 Score = 36.6 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 35/95 (36%), Gaps = 11/95 (11%) Query: 90 VHRYPD--------RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK 141 VHRY R +L +C FCFRR K S D Y+ Sbjct: 264 VHRYQTGKTRYAHYRQADDILADAGWHCSFCFRRISEFIFKDEAYSHVDKSRVQRYL-NP 322 Query: 142 SQIWEVIFTGGDPL-ILSHK-RLQKVLKTLRYIKH 174 +I VI G D +L + ++++ + I H Sbjct: 323 KRIQRVICKGADLFDMLPEEYTFKEIIGKMGPIPH 357 >gi|58617513|ref|YP_196712.1| hypothetical protein ERGA_CDS_07860 [Ehrlichia ruminantium str. Gardel] gi|58417125|emb|CAI28238.1| Conserved hypothetical protein [Ehrlichia ruminantium str. Gardel] Length = 405 Score = 36.6 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 25/130 (19%), Positives = 48/130 (36%), Gaps = 26/130 (20%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTG 151 R L+++ + C C FC + G+ + E + +++ + EV+FTG Sbjct: 126 KSRALIEIQNGCNHECTFCVITKARGNNRSLH-----IEDIITQVKDCVNNGYNEVVFTG 180 Query: 152 GDPLILSHKRLQKVLKT---------LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKE 202 D +S + + L I ++ LR S + + + I +LI + Sbjct: 181 VD---ISDFGIDIYGQRMLGVMIKRVLGAIPQLRRLRL-SSIDVAE---IEDDLIDII-- 231 Query: 203 AGKPVYIAIH 212 G H Sbjct: 232 -GNEPRFMPH 240 >gi|262038001|ref|ZP_06011413.1| radical SAM family Fe-S protein [Leptotrichia goodfellowii F0264] gi|261747954|gb|EEY35381.1| radical SAM family Fe-S protein [Leptotrichia goodfellowii F0264] Length = 454 Score = 36.6 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 46/251 (18%), Positives = 88/251 (35%), Gaps = 45/251 (17%) Query: 58 RQFIPQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREM 117 + +I L +P R D I + IV + CP +C FC++ Sbjct: 133 KMYISVHRSLENIPVVRRDLIKRERYLVPNSIV----------VTRGCPHHCDFCYKDAF 182 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQI 177 Q G ++ + AL I+ ++ D L+ + K +++ + ++ + V Sbjct: 183 Y--QNGKSFYTRLVDDALKEIESLPGRH--LYFLDDHLLGNPKFAKELFEGMKGMNRVFQ 238 Query: 178 LRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI----------HANHPYEFSEEAIAAI 227 + + I+ EAG +N + I + Sbjct: 239 ------GAATIDSILTGDTIEKAAEAGLRSIFVGFETFSPENLKQSNKSQNLQRDYIKVV 292 Query: 228 SRLANAGIILLSQSVLLKGI-NDDPEILANLMRTFVELRIKP------YYLHHPDLAAGT 280 +RL + GI++ V G+ NDD ++ + V+ +K Y H GT Sbjct: 293 NRLHSLGIMINGSFVF--GLDNDDKDV----FKRTVDWGVKNAITTSTY--HILTPYPGT 344 Query: 281 SHFRLTIEEGQ 291 F+ E+G+ Sbjct: 345 RLFKRMEEDGR 355 >gi|253572329|ref|ZP_04849732.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] gi|251838104|gb|EES66192.1| conserved hypothetical protein [Bacteroides sp. 1_1_6] Length = 393 Score = 36.6 bits (84), Expect = 5.8, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 45/114 (39%), Gaps = 17/114 (14%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE----KSQIWEV 147 R + I L + C C CF ++ K+ + I++ +I ++ Sbjct: 5 RKLESIFLFVTGKCNAKCAMCF--------YANDMAKKERDLTFEEIRKISETAGEINKL 56 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 +GG+P L + L ++L+ H++ + + P R+ E ++ + Sbjct: 57 WVSGGEP-TLR-EDLPEILEMFYQNNHIKDVNMPTNGL--KPDRV-IEWVERFR 105 >gi|295696097|ref|YP_003589335.1| Radical SAM domain protein [Bacillus tusciae DSM 2912] gi|295411699|gb|ADG06191.1| Radical SAM domain protein [Bacillus tusciae DSM 2912] Length = 358 Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 5/56 (8%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIWEVIFTGG 152 + +VC +C FC+ R + +S + L Y++E I E GG Sbjct: 58 INPTNVCEAHCGFCYYRRDPDQEGAYTMSP---DEVLEYVKERWTPGIREFHIVGG 110 >gi|289596878|ref|YP_003483574.1| molybdenum cofactor biosynthesis protein A [Aciduliprofundum boonei T469] gi|289534665|gb|ADD09012.1| molybdenum cofactor biosynthesis protein A [Aciduliprofundum boonei T469] Length = 308 Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 99 LKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + C + C +C R + ++ + E L I + I +V FTGG+PL Sbjct: 14 VSVTERCNLNCFYCHREGEWHR----HHSEMTPDEIERILK-IARELDIRKVKFTGGEPL 68 Query: 156 ILSH 159 + Sbjct: 69 CRND 72 >gi|229828421|ref|ZP_04454490.1| hypothetical protein GCWU000342_00482 [Shuttleworthia satelles DSM 14600] gi|229793015|gb|EEP29129.1| hypothetical protein GCWU000342_00482 [Shuttleworthia satelles DSM 14600] Length = 450 Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 19/135 (14%), Positives = 49/135 (36%), Gaps = 25/135 (18%) Query: 94 PDRILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R +K+ C +C +C R + VL AA Y ++ + + Sbjct: 142 HTRAFIKVQDGCNQFCSYCIIPLARGRIRSRSPKDVLKEVRGLAASGY--QEVVLNGIHL 199 Query: 150 TGGDPLILSHKR-----------LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQ 198 + + +++ L ++++ + ++ ++ +R S ++P+ ++ + Sbjct: 200 SSY-GMTSYNRQVASEEMAGGGHLMELVEAVAGVEGIRRIRLGS----MEPRLVDRAFAE 254 Query: 199 CLKEAGKPVYIAIHA 213 L K I H Sbjct: 255 RLARVEK---ICPHF 266 >gi|183982863|ref|YP_001851154.1| oxidoreductase [Mycobacterium marinum M] gi|183176189|gb|ACC41299.1| conserved hypothetical oxidoreductase [Mycobacterium marinum M] Length = 389 Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 23/167 (13%), Positives = 60/167 (35%), Gaps = 39/167 (23%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW----------EV 147 ++K +C + C++C+ E + T +S AL I++ + + ++ Sbjct: 4 VIKTSKLCNLRCKYCYEWEHLSD--PTRMSESVWRDALVAIRDYADLTTRRCGYDIPVDI 61 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHV---------QILR--FHSRVPIVDPQRINPEL 196 I+ GG+P +L ++ + + ++ + +R + + + E Sbjct: 62 IWHGGEPTLLP----REYFERVFALQREVFPSDWLQSRRVRNVLQTNL-----YSVRDEH 112 Query: 197 IQCLKEAGKPVYIAIHANHPYEFS-------EEAIAAISRLANAGII 236 + E + I++ + + I RL + G+ Sbjct: 113 LDVFAEHDVELGISVDFAEGVRLTAGGKRTEAAVRSNIRRLQDRGLP 159 >gi|166710944|ref|ZP_02242151.1| molybdenum cofactor biosynthesis protein A [Xanthomonas oryzae pv. oryzicola BLS256] Length = 343 Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 15/114 (13%) Query: 69 ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV----GSQKGT 124 LP P+ D + PL+ + L ++ C C +C + V G Sbjct: 5 PLPNLATAPMQDRDGRPLRDLR--------LSVIEACNFRCGYCMPADRVPDDYGFDSRQ 56 Query: 125 VLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 LS E + + +V TGG+PL+ L ++ L I+ ++ L Sbjct: 57 RLSFDQLETLVRAFVS-VGVAKVRLTGGEPLLRRD--LPSLIARLTAIEGIEDL 107 >gi|160885195|ref|ZP_02066198.1| hypothetical protein BACOVA_03193 [Bacteroides ovatus ATCC 8483] gi|156109545|gb|EDO11290.1| hypothetical protein BACOVA_03193 [Bacteroides ovatus ATCC 8483] Length = 439 Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 17/125 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C +C G + ++S + T A A E++ TG Sbjct: 148 RTRFFLKVQDGCDYFCSYCTIPFARGRSRNGTIASMVEQTRQAAA-----EGGKEIVLTG 202 Query: 152 ---GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 GD + + ++K L + ++ R S ++P + E+I+ + + Sbjct: 203 VNIGDFGKTTGESFFDLVKALDQVDGIERYRISS----IEPNLLTDEIIEFVSHSR---S 255 Query: 209 IAIHA 213 H Sbjct: 256 FMPHF 260 >gi|241663687|ref|YP_002982047.1| pyrroloquinoline quinone biosynthesis protein PqqE [Ralstonia pickettii 12D] gi|240865714|gb|ACS63375.1| coenzyme PQQ biosynthesis protein E [Ralstonia pickettii 12D] Length = 400 Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 12/108 (11%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 LN D + +P+ G P +L +L + CP++C FC + ++ L Sbjct: 3 LNAAGSFEADSLLAPAATPMPGP----PLWLLAELTYRCPLHCAFCS-NPVDYTRHDQEL 57 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 +++ + + ++ +GG+PL+ L+TL H Sbjct: 58 TTEQWCDVFTQARALGAV-QLGLSGGEPLLRKD------LETLVAHAH 98 >gi|108756838|ref|YP_631100.1| radical SAM domain-containing protein [Myxococcus xanthus DK 1622] gi|108460718|gb|ABF85903.1| radical SAM domain protein [Myxococcus xanthus DK 1622] Length = 294 Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 54/140 (38%), Gaps = 18/140 (12%) Query: 101 LLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF--TGGDPLIL 157 L C C +C F + + + D E +A+++ ++Q +F G+ LI Sbjct: 10 PLSSCNYGCEYCPFGKWK-HTDEELAKDRADLERFVAWVEARTQDTVSVFFTPWGEALIW 68 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPY 217 + + L L ++ HV+ L + + + + ++ ++ H Sbjct: 69 PWYQ--EALARLSHLPHVERLAIQTNLSCKL------DWVAGVRADKLGIWATYH----P 116 Query: 218 EFS--EEAIAAISRLANAGI 235 E++ +A ++L G+ Sbjct: 117 EWTKRHRFVAQCAKLTELGV 136 >gi|86750500|ref|YP_486996.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas palustris HaA2] gi|86573528|gb|ABD08085.1| GTP cyclohydrolase subunit MoaA [Rhodopseudomonas palustris HaA2] Length = 345 Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 32/174 (18%), Positives = 67/174 (38%), Gaps = 41/174 (23%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C +M + +L+ ++ + + + + ++ TGG+PL+ Sbjct: 30 VSITDRCDFRCAYCMSEDMTFLPRADLLTLEELDRLCSAFIVR-GVRKLRLTGGEPLV-- 86 Query: 159 HKRLQKVLKTLRYIKHV---------------QILRF-------HSRVPIVDPQRINPEL 196 + + ++++L H+ Q+ RF R V ++P Sbjct: 87 RRNMMSLVRSLSR--HLDTGALRELTLTTNGSQLARFAAELRDCGVRRINVSLDTLDPAK 144 Query: 197 IQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 + + G EF IA I AG+ + +V+LKG+N+D Sbjct: 145 FRAITRWG-------------EFDR-VIAGIEAARAAGLAVKINAVVLKGVNED 184 >gi|313201322|ref|YP_004039980.1| coenzyme pqq biosynthesis protein e [Methylovorus sp. MP688] gi|312440638|gb|ADQ84744.1| coenzyme PQQ biosynthesis protein E [Methylovorus sp. MP688] Length = 394 Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L ++ + CP++C FC+ L+++ AL ++ + ++ +GG+PL+ Sbjct: 20 LLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARKMGAL-QLGISGGEPLL 78 Query: 157 LSHKRLQKVLKTLRYI 172 ++ +++ R + Sbjct: 79 RDD--IEDIVREARQL 92 >gi|253999234|ref|YP_003051297.1| pyrroloquinoline quinone biosynthesis protein PqqE [Methylovorus sp. SIP3-4] gi|253985913|gb|ACT50770.1| coenzyme PQQ biosynthesis protein E [Methylovorus sp. SIP3-4] Length = 395 Score = 36.6 bits (84), Expect = 5.9, Method: Composition-based stats. Identities = 14/76 (18%), Positives = 38/76 (50%), Gaps = 3/76 (3%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L ++ + CP++C FC+ L+++ AL ++ + ++ +GG+PL+ Sbjct: 21 LLAEVTYRCPLHCAFCYNPTDYDKHTQNELTTEQWIQALRDARKMGAL-QLGISGGEPLL 79 Query: 157 LSHKRLQKVLKTLRYI 172 ++ +++ R + Sbjct: 80 RDD--IEDIVREARQL 93 >gi|254168775|ref|ZP_04875616.1| probable molybdenum cofactor biosynthesis protein A [Aciduliprofundum boonei T469] gi|197622212|gb|EDY34786.1| probable molybdenum cofactor biosynthesis protein A [Aciduliprofundum boonei T469] Length = 300 Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 99 LKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + C + C +C R + ++ + E L I + I +V FTGG+PL Sbjct: 6 VSVTERCNLNCFYCHREGEWHR----HHSEMTPDEIERILK-IARELDIRKVKFTGGEPL 60 Query: 156 ILSH 159 + Sbjct: 61 CRND 64 >gi|170077243|ref|YP_001733881.1| tRNA modifying enzyme MiaB-like protein [Synechococcus sp. PCC 7002] gi|238066620|sp|B1XPZ7|RIMO_SYNP2 RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|169884912|gb|ACA98625.1| tRNA modifying enzyme MiaB-like protein [Synechococcus sp. PCC 7002] Length = 439 Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 57/149 (38%), Gaps = 23/149 (15%) Query: 92 RYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVL------SSKDTEAALAYIQEK 141 RY L++ C C FC + G Q+ + + + E + I Sbjct: 137 RYRTTNEAVAYLRVAEGCDYRCAFCIIPHLRGDQRSRPIESIVAEAKQLAEQGVQEIILI 196 Query: 142 SQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK 201 SQI G D I +L ++L+ L + V +R H P PE+I ++ Sbjct: 197 SQITTNY--GKD--IYGKPKLAELLRALGGVD-VPWIRIHYAYPTGL----TPEVIAAMR 247 Query: 202 EAGKPV-YIAIHANHPYEFSEEAIAAISR 229 + + Y+ + H + + + A++R Sbjct: 248 DTPNVIPYLDLPLQHSH---PDILRAMNR 273 >gi|145590325|ref|YP_001152327.1| putative molybdenum cofactor biosynthesis protein A [Pyrobaculum arsenaticum DSM 13514] gi|145282093|gb|ABP49675.1| GTP cyclohydrolase subunit MoaA [Pyrobaculum arsenaticum DSM 13514] Length = 310 Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 37/216 (17%), Positives = 82/216 (37%), Gaps = 30/216 (13%) Query: 101 LLHVCPVYCRFCFRREMVGS--QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + C C FC G ++G+ L+++D ++ + + + TGG+PL+ Sbjct: 17 VNDECNYNCVFC---HFEGQLRRQGSYLTAEDYGFVSSFFRS-LGVADFKITGGEPLLRR 72 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHANHPY 217 + ++ + + V + + + L++AG + +++H P Sbjct: 73 D--IDLIVANVAKT--------GAYVTVTTNGYLLRGWVDKLRKAGVARLNVSVHTTDPE 122 Query: 218 E----------FSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 + E + ++ + G+ L V+L+ IN D + + L++ L Sbjct: 123 KYAKITSTSPAVFREVMRGLAEARDRGLSLKLNVVVLRDINTDRQSVKELVKLAARLGAS 182 Query: 268 PYYLHHPDLAAGTSHFR---LTIEEGQKIVASLKEK 300 ++ +GT F IE +IV L + Sbjct: 183 LQFIELMPTGSGTKIFDNLFEPIESIVEIVTQLGGR 218 >gi|148555801|ref|YP_001263383.1| beta-ketothiolase [Sphingomonas wittichii RW1] gi|148500991|gb|ABQ69245.1| acetyl-CoA acetyltransferase [Sphingomonas wittichii RW1] Length = 393 Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 21/89 (23%), Positives = 41/89 (46%), Gaps = 9/89 (10%) Query: 146 EVIFTGGDPLIL--SHKRLQKVLKTLRYIKHV-QILRFHSRVPIVDPQRINPELIQCLKE 202 E I TG ++L S L + + + HV + R+ +++ V+ + LI+ L + Sbjct: 94 EAIVTGAKAMVLGESDIVLAGGAEVMSRVPHVVKGARWGTKMGNVE---MTDGLIEALSD 150 Query: 203 AGKPVYIAIHANHPYE---FSEEAIAAIS 228 V++ I A + E + EA A++ Sbjct: 151 PFDKVHMGITAENVAERYQITREAQDALA 179 >gi|148259214|ref|YP_001233341.1| radical SAM domain-containing protein [Acidiphilium cryptum JF-5] gi|146400895|gb|ABQ29422.1| Radical SAM domain protein [Acidiphilium cryptum JF-5] Length = 579 Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 17/136 (12%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE-KSQIWEVIFTGGD 153 + + +C + C C+ + + L L + ++ E+ TGG+ Sbjct: 299 ETLWFNTGTLCNLACEGCYIESSPRNDRLAWLRLDGFRRVLDEAADRHPELREIGLTGGE 358 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI----VDPQRINPELIQCLKEAGKPVYI 209 P + ++ L + + RV + + P R + G+ +++ Sbjct: 359 PFMNPD------IEALIGMALDR----GYRVLVLTNAMTPMR--HHMAAIAGWRGRDLHL 406 Query: 210 AIHANHPYEFSEEAIA 225 + +H E A+ Sbjct: 407 RVSLDHHTEAGHAALR 422 >gi|308232336|ref|ZP_07415756.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu001] gi|308372426|ref|ZP_07428640.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu004] gi|308373630|ref|ZP_07433114.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu005] gi|308378192|ref|ZP_07481852.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu009] gi|308379413|ref|ZP_07486196.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu010] gi|308380573|ref|ZP_07490415.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu011] gi|308214306|gb|EFO73705.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu001] gi|308333330|gb|EFP22181.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu004] gi|308336984|gb|EFP25835.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu005] gi|308353341|gb|EFP42192.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu009] gi|308357175|gb|EFP46026.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu010] gi|308361126|gb|EFP49977.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu011] Length = 344 Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L ++ C + CR+C + +LS K+ A + + +V TGG+PLI Sbjct: 16 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 74 Query: 158 SHKRLQKVLKTLRY 171 L ++++TL Sbjct: 75 PD--LPEIVRTLSA 86 >gi|164687312|ref|ZP_02211340.1| hypothetical protein CLOBAR_00953 [Clostridium bartlettii DSM 16795] gi|164603736|gb|EDQ97201.1| hypothetical protein CLOBAR_00953 [Clostridium bartlettii DSM 16795] Length = 476 Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 17/88 (19%), Positives = 34/88 (38%), Gaps = 4/88 (4%) Query: 91 HRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 Y +RI+ L L + C C +C + L+ + + +Q+ Sbjct: 79 RFYGNRIVMFAPLYLSNYCVNGCVYCPYHAKNKTIARKKLTQDEIRREVIALQDMGHKRL 138 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + G DP+ + + + + T+ IKH Sbjct: 139 ALEAGEDPVNNPIEYILECINTIYSIKH 166 >gi|52080450|ref|YP_079241.1| coenzyme PQQ synthesis protein, putative [Bacillus licheniformis ATCC 14580] gi|52785831|ref|YP_091660.1| moaA/nifB/pqqE family protein [Bacillus licheniformis ATCC 14580] gi|319645590|ref|ZP_07999822.1| MoaA/nifB/pqqE family protein [Bacillus sp. BT1B_CT2] gi|52003661|gb|AAU23603.1| Coenzyme PQQ synthesis protein, putative [Bacillus licheniformis ATCC 14580] gi|52348333|gb|AAU40967.1| moaA / nifB / pqqE family [Bacillus licheniformis ATCC 14580] gi|317392476|gb|EFV73271.1| MoaA/nifB/pqqE family protein [Bacillus sp. BT1B_CT2] Length = 367 Score = 36.6 bits (84), Expect = 6.0, Method: Composition-based stats. Identities = 34/180 (18%), Positives = 63/180 (35%), Gaps = 20/180 (11%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 + P ++ +L C + C C + LS K+ + + I ++ TG Sbjct: 8 KSPFIVIWELTRACELKCLHCRASAQ-NKRDPRELSLKEGKDLIDQIHAMDNPL-LVLTG 65 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY--- 208 GDPL + +++ + +R S P P + E IQ KE G + Sbjct: 66 GDPL-MRDDVFA-IIEYAVQ----KGVRV-SMTPSATPN-VTREAIQSAKEIGLSRWAFS 117 Query: 209 -------IAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 I H + + AI + + L +V+ D + +A L++ Sbjct: 118 LDGPTREIHDHFRGTDGSFDLTMKAIRYIHECQLPLQINTVISSYNIDYLDEMAKLIKEL 177 >gi|237709650|ref|ZP_04540131.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 9_1_42FAA] gi|229456286|gb|EEO62007.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 9_1_42FAA] Length = 472 Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 89 IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 I H+ Y +RI+ L L + C C +C + L+ ++ + +Q+ Sbjct: 75 IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + G DPL + + + ++T+ IKH Sbjct: 135 KRLALEAGEDPLRNPIEYILESIRTIYSIKH 165 >gi|254168706|ref|ZP_04875548.1| probable molybdenum cofactor biosynthesis protein A [Aciduliprofundum boonei T469] gi|197622332|gb|EDY34905.1| probable molybdenum cofactor biosynthesis protein A [Aciduliprofundum boonei T469] Length = 300 Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 8/64 (12%) Query: 99 LKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + + C + C +C R + ++ + E L I + I +V FTGG+PL Sbjct: 6 VSVTERCNLNCFYCHREGEWHR----HHSEMTPDEIERILK-IARELDIRKVKFTGGEPL 60 Query: 156 ILSH 159 + Sbjct: 61 CRND 64 >gi|144899591|emb|CAM76455.1| Fe-S oxidoreductase [Magnetospirillum gryphiswaldense MSR-1] Length = 291 Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 27/91 (29%), Gaps = 12/91 (13%) Query: 95 DRILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEK----SQIWEVIF 149 D ++++ C C FC V + +D +A I V Sbjct: 16 DNLIIQATLGCRFNGCTFCS-MYKVKEYRA-----RDLDAVYDDIAAAALAWPDAHRVFL 69 Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHVQILR 179 GD L L + L ++Q + Sbjct: 70 ADGDAYNLPTDHLAAICDRLAATFPNLQRVT 100 >gi|297617643|ref|YP_003702802.1| hypothetical protein Slip_1474 [Syntrophothermus lipocalidus DSM 12680] gi|297145480|gb|ADI02237.1| protein of unknown function DUF512 [Syntrophothermus lipocalidus DSM 12680] Length = 454 Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 34/186 (18%), Positives = 63/186 (33%), Gaps = 58/186 (31%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C C FCF ++ + ++ + D Sbjct: 86 AVFDRLRTCRNRCLFCFMDQLPSGVRKSLRTKDD-------------------------- 119 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 RL + + ++ R + E I L+ + P+Y+++HA Sbjct: 120 --DYRLSFLYGNFITLTNL--------------DREDWEAIAALRLS--PLYVSVHATDS 161 Query: 217 Y--------EFSEEAIAAISRLANAGIILLSQSVLLKGIND------DPEILANLMRTFV 262 E + I+ ++RL + G+ + +Q VL GIND LA+ T + Sbjct: 162 RVRACMLGNEKGGQIISDLNRLRDLGLQVHTQVVLCPGINDGEVLAETVSTLASFWPTVL 221 Query: 263 ELRIKP 268 + I P Sbjct: 222 SIGIVP 227 >gi|289549019|ref|YP_003474007.1| RNA modification enzyme, MiaB family [Thermocrinis albus DSM 14484] gi|289182636|gb|ADC89880.1| RNA modification enzyme, MiaB family [Thermocrinis albus DSM 14484] Length = 437 Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 17/100 (17%), Positives = 33/100 (33%), Gaps = 8/100 (8%) Query: 97 ILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 + ++ C +C +C R ++L A + V G Sbjct: 148 AYVTVMKGCDKHCTYCVVPKTRGRQRSRSLESILEEVRWLVADGVKEIHLLGQNVTAWGQ 207 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRI 192 D + ++L + I V+ +RF + P +RI Sbjct: 208 DI----NIHFSELLYRVAEIPGVERIRFTTGHPSDMDERI 243 >gi|189425324|ref|YP_001952501.1| radical SAM protein [Geobacter lovleyi SZ] gi|189421583|gb|ACD95981.1| Radical SAM domain protein [Geobacter lovleyi SZ] Length = 293 Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 22/93 (23%), Positives = 32/93 (34%), Gaps = 15/93 (16%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-----IWEVIFT 150 ++ ++ C CRFC G KG + E LA I E + V Sbjct: 18 LIFQITVGCSQNQCRFC------GMYKGKQFHLRPVEEILAEITELPSTYRTRVERVFLA 71 Query: 151 GGDPLILSHKRLQKVLKTLRY-IKHVQILRFHS 182 GD L+ + L +L L + R S Sbjct: 72 DGDALVYPFEGLVTILDALASTFPGLT--RIGS 102 >gi|238894848|ref|YP_002919582.1| pyrroloquinoline quinone biosynthesis protein PqqE [Klebsiella pneumoniae NTUH-K2044] gi|130802|sp|P27507|PQQE_KLEPN RecName: Full=Coenzyme PQQ synthesis protein E; AltName: Full=Pyrroloquinoline quinone biosynthesis protein E gi|809708|emb|CAA41583.1| pqqE [Klebsiella pneumoniae] gi|238547164|dbj|BAH63515.1| pyrroloquinoline quinone synthesis protein E [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length = 380 Score = 36.6 bits (84), Expect = 6.1, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 31/180 (17%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L +L + CP+ C +C + +++ L+++ + + ++ F+GG+PL Sbjct: 14 LLAELTYRCPLQCPYCS-NPLDFARQDKELTTEQWIEVFRQARAMGSV-QLGFSGGEPLT 71 Query: 157 LSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 L ++++ R + ++ + + EAG +I I Sbjct: 72 RKD--LPELIRAARDLGFYTNLITSGIG----------LTESKLDAFSEAGLD-HIQISF 118 Query: 214 NHPYEFSEEAIA----------AISRLANAG--IILLSQSVLLKGINDDPEILANLMRTF 261 E A+A A+++ A ++L+ VL + D + + L Sbjct: 119 QASDEVLNAALAGNKKAFQQKLAMAKAVKARDYPMVLN-FVLHRHNIDQLDKIIELCIEL 177 >gi|265754282|ref|ZP_06089471.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_33FAA] gi|263234991|gb|EEZ20546.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_33FAA] Length = 472 Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 89 IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 I H+ Y +RI+ L L + C C +C + L+ ++ + +Q+ Sbjct: 75 IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + G DPL + + + ++T+ IKH Sbjct: 135 KRLALEAGEDPLRNPIEYILESIRTIYSIKH 165 >gi|262044465|ref|ZP_06017524.1| coenzyme PQQ synthesis protein E [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gi|259038195|gb|EEW39407.1| coenzyme PQQ synthesis protein E [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] Length = 380 Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 29/180 (16%), Positives = 67/180 (37%), Gaps = 31/180 (17%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +L +L + CP+ C +C + +++ L+++ + + ++ F+GG+PL Sbjct: 14 LLAELTYRCPLQCPYCS-NPLDFARQDKELTTEQWIEVFRQARAMGSV-QLGFSGGEPLT 71 Query: 157 LSHKRLQKVLKTLRYIK---HVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHA 213 L ++++ R + ++ + + EAG +I I Sbjct: 72 RKD--LPELIRAARDLGFYTNLITSGIG----------LTESKLDAFSEAGLD-HIQISF 118 Query: 214 NHPYEFSEEAIA----------AISRLANAG--IILLSQSVLLKGINDDPEILANLMRTF 261 E A+A A+++ A ++L+ VL + D + + L Sbjct: 119 QASDEVLNAALAGNKKAFQQKLAMAKAVKARDYPMVLN-FVLHRHNIDQLDKIIELCIEL 177 >gi|212639043|ref|YP_002315563.1| Radical SAM superfamily enzyme [Anoxybacillus flavithermus WK1] gi|212560523|gb|ACJ33578.1| Radical SAM superfamily enzyme [Anoxybacillus flavithermus WK1] Length = 380 Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 32/197 (16%), Positives = 59/197 (29%), Gaps = 27/197 (13%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA-YIQEKSQIWEVIFTGG 152 P ++ ++ C + C C + + Y + +FTGG Sbjct: 14 PFIVIWEVTRACQLKCVHCRADAQPFPDPRELTYEEGLRLIDDIYDMNNPML---VFTGG 70 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVY---- 208 D ++ L + + IK + P P + E ++ KE G + Sbjct: 71 DCMMRED--LFDLAE--YAIKKGMRVSI---TPSATPN-VTKEKMKKAKEIGLSRWAFSL 122 Query: 209 ------IAIHA-NHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 I P F I I L + L +V+ + D E +A L+ Sbjct: 123 DGPTADIHDRFRGTPSSFD-LTIENIRYLNELHMPLQINTVISRYNYDHLEQMAKLVAEL 181 Query: 262 VELRIKPYYLHHPDLAA 278 + +Y+ Sbjct: 182 KAVM---WYIFLLVPTG 195 >gi|124514476|gb|EAY55989.1| conserved protein of unknown function [Leptospirillum rubarum] Length = 462 Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%) Query: 198 QCLKEAGKPVYIAIHANHP--------YEFSEEAIAAISRLANAGIILLSQSVLLKGIND 249 + L + P+YI++HA P E + + + I L GI L +Q V+ GIND Sbjct: 136 RILDQRLSPLYISVHATDPAVRKRLLRNERAPDILDRIDHLIAGGIRLHTQIVITPGIND 195 >gi|331086912|ref|ZP_08335989.1| hypothetical protein HMPREF0987_02292 [Lachnospiraceae bacterium 9_1_43BFAA] gi|330410078|gb|EGG89513.1| hypothetical protein HMPREF0987_02292 [Lachnospiraceae bacterium 9_1_43BFAA] Length = 484 Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 19/114 (16%), Positives = 39/114 (34%), Gaps = 19/114 (16%) Query: 96 RILLKLLHVCPVYCRFCFR---REMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 + L + C ++C+ C+ V K + K +A Y+ I +GG Sbjct: 103 TVTLNITDKCNLFCKHCYIGASSRKVQFMK-LQDAKKVVDAIWPYM--NPS-CSFIVSGG 158 Query: 153 DPLILSH--KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 + L+ + L+ + + ++ + I PEL L + Sbjct: 159 EALLNPDCIEILEYITSR--GKGKINLVTNGT--------TITPELADKLSKIR 202 >gi|264677776|ref|YP_003277682.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni CNB-2] gi|262208288|gb|ACY32386.1| molybdenum cofactor biosynthesis protein A [Comamonas testosteroni CNB-2] Length = 342 Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 32/79 (40%), Gaps = 8/79 (10%) Query: 99 LKLLHVCPVYCRFCFRREMV-----GSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 + + C C +C +E+ ++LS ++ + ++ TGG+ Sbjct: 6 ISVTDRCNFRCNYCMPKEVFDKNYQYLPHSSLLSFEEITRLARLFVAH-GVRKLRLTGGE 64 Query: 154 PLILSHKRLQKVLKTLRYI 172 PL+ K ++ ++ L + Sbjct: 65 PLL--RKNIEALIAQLAEL 81 >gi|209549618|ref|YP_002281535.1| molybdenum cofactor biosynthesis protein A [Rhizobium leguminosarum bv. trifolii WSM2304] gi|226707377|sp|B5ZRM8|MOAA_RHILW RecName: Full=Molybdenum cofactor biosynthesis protein A gi|209535374|gb|ACI55309.1| molybdenum cofactor biosynthesis protein A [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 348 Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 31/178 (17%), Positives = 60/178 (33%), Gaps = 38/178 (21%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + + ++ TGG+PL+ Sbjct: 34 VSVTDRCDFRCTYCMAENMTFLPKKDLLTLEELDRLCSAFVA-KGVKKIRLTGGEPLV-- 90 Query: 159 HKRLQKVLKTL-----RYIKHVQILRFHS--------------RVPIVDPQRINPELIQC 199 K + +++ L + V + S R V ++P+ + Sbjct: 91 RKNIMYLVRRLGEKIGAGLDEVTLTTNGSQLSRHAEELYDCGVRRINVSLDTLDPDKFRK 150 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILA 255 + G + I AGI + +V LK ND PEI+ Sbjct: 151 ITRWGDFAKVM--------------EGIDAAQKAGIKIKLNAVALKDFNDAEMPEIMR 194 >gi|297583665|ref|YP_003699445.1| radical SAM domain-containing protein [Bacillus selenitireducens MLS10] gi|297142122|gb|ADH98879.1| Radical SAM domain protein [Bacillus selenitireducens MLS10] Length = 368 Score = 36.6 bits (84), Expect = 6.2, Method: Composition-based stats. Identities = 23/87 (26%), Positives = 34/87 (39%), Gaps = 8/87 (9%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159 ++C YCRFC ++ G VL +D IQE + E++ GG + Sbjct: 61 TNLCDTYCRFCAFYRPPNAKDGYVLDDEDIYQK---IQETKDVGGTEILMQGG---TNPN 114 Query: 160 KRLQKVLKTLRYIKHVQILRFHSRVPI 186 + LR IK + HS P Sbjct: 115 LPFEYYTDLLRNIKKRFDITMHSFSPA 141 >gi|329731486|gb|EGG67849.1| YfkB-like domain protein [Staphylococcus aureus subsp. aureus 21193] Length = 383 Score = 36.6 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 16/110 (14%) Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 P E + + ++ L I ++C + C C + + Sbjct: 16 PWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTVDPEP 62 Query: 131 TEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 63 LDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 111 >gi|206889368|ref|YP_002249102.1| heme biosynthesis (NirJ-2) family protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] gi|206741306|gb|ACI20363.1| heme biosynthesis (NirJ-2) family protein, putative [Thermodesulfovibrio yellowstonii DSM 11347] Length = 472 Score = 36.6 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 31/165 (18%), Positives = 70/165 (42%), Gaps = 13/165 (7%) Query: 14 LYNANLIKKEQIDEIKEISNHYSIALTP-VI---ANLINPHNPNDPIARQFIPQKEELNI 69 L + +L + ++ + +++P +L++ + + ++ ++I + EL Sbjct: 7 LNDIHLFSIRDEHFLLDVEGNKIFSISPEAYEIALSLMSGNKSTNKLSLRYIRAERELRK 66 Query: 70 LPEEREDPIGDNNHSPLKGIVHRYP---DRILLKLLHVCPVYCRFCFRR-EMVGSQKGTV 125 + + +P+ ++ P + + L L H C + C +CF Sbjct: 67 I-FDSFEPLNSEEIEHRSKLLEEKPYKLNGLWLGLAHACNLGCSYCFANTPNYLQNHRPF 125 Query: 126 LSSKDTEAALAY-IQEKSQIW--EVIFTGGDPLILSHKRLQKVLK 167 +S + + A+ + I + I ++IF GG+PL L LQKV+ Sbjct: 126 MSEETAKRAIDFLINQSPDIEEYDIIFFGGEPL-LKFDLLQKVVD 169 >gi|295696361|ref|YP_003589599.1| Radical SAM domain protein [Bacillus tusciae DSM 2912] gi|295411963|gb|ADG06455.1| Radical SAM domain protein [Bacillus tusciae DSM 2912] Length = 359 Score = 36.6 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 8/74 (10%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQI--WEVIFTGGDPLILSH 159 +VC YC FC G + VL E I+E ++ E++ GG Sbjct: 66 SNVCDTYCTFCAFYRRPGHPEAYVLPD---EVIFEKIEETVRLGGTEILMQGG---THPD 119 Query: 160 KRLQKVLKTLRYIK 173 L+ + LR IK Sbjct: 120 LPLEWYTELLRKIK 133 >gi|15920846|ref|NP_376515.1| hypothetical protein ST0626 [Sulfolobus tokodaii str. 7] gi|15621630|dbj|BAB65624.1| 350aa long conserved hypothetical protein [Sulfolobus tokodaii str. 7] Length = 350 Score = 36.6 bits (84), Expect = 6.3, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 55/151 (36%), Gaps = 33/151 (21%) Query: 98 LLKLLHVCPVYCRFC---FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 L+ C + C +C F +V D + I++ VIF GG+P Sbjct: 4 LVLTTGKCNLTCDYCGGSFPSHIVPWGVKY-----DIQKLKNAIEKDQNAT-VIFYGGEP 57 Query: 155 LILSHKRLQKVLKTLRYIKHVQILR--FHSRVPIV--DPQRINPELIQCL---------- 200 L+ K + + + +++ R + V P+R ++ L Sbjct: 58 LMNP-----KFIMQV--MDNIKAKRWGIQTNGVAVKLLPERYWKKMNVALLSIDGREEIT 110 Query: 201 -KEAGKPVY--IAIHANHPYEFSEEAIAAIS 228 K GK VY + HA + E E IA ++ Sbjct: 111 DKHRGKGVYKVVVKHAKYLKELGVETIARMA 141 >gi|328884350|emb|CCA57589.1| 2-oxoglutarate oxidoreductase, beta subunit [Streptomyces venezuelae ATCC 10712] Length = 353 Score = 36.6 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 15/119 (12%) Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHS---RVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 +L K L K + + ++H Q +RF + + + DP +L I IH Sbjct: 226 VLKDKDLAK--EAVIRLEHGQPIRFGTENDKGVVRDPA--TGDLHVVTVTPENESRILIH 281 Query: 213 ANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPE--ILANLMRTFVELRIKPY 269 H + A+SRLA+ L Q+ + G+ E + LM +E ++ Y Sbjct: 282 DAHAT--TPTTAFALSRLAD--PDTLHQTPI--GVFRSVERPVYDTLMADQLEAAVERY 334 >gi|258543190|ref|YP_003188623.1| pyrroloquinoline quinone biosynthesis protein PqqE [Acetobacter pasteurianus IFO 3283-01] gi|256634268|dbj|BAI00244.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE [Acetobacter pasteurianus IFO 3283-01] gi|256637328|dbj|BAI03297.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE [Acetobacter pasteurianus IFO 3283-03] gi|256640380|dbj|BAI06342.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE [Acetobacter pasteurianus IFO 3283-07] gi|256643437|dbj|BAI09392.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE [Acetobacter pasteurianus IFO 3283-22] gi|256646492|dbj|BAI12440.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE [Acetobacter pasteurianus IFO 3283-26] gi|256649545|dbj|BAI15486.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE [Acetobacter pasteurianus IFO 3283-32] gi|256652531|dbj|BAI18465.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE [Acetobacter pasteurianus IFO 3283-01-42C] gi|256655589|dbj|BAI21516.1| coenzyme Pyrrolo-quinoline quinone (PQQ) synthesis protein E PqqE [Acetobacter pasteurianus IFO 3283-12] Length = 364 Score = 36.6 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 45/265 (16%), Positives = 87/265 (32%), Gaps = 80/265 (30%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P +L +L H CP+ C +C + + L ++D + L+ + + +V F+GG+ Sbjct: 7 PMSLLAELTHRCPLQCPYCS-NPLQLEPRTQELGTEDWKRVLSE-AAEMGVLQVHFSGGE 64 Query: 154 PL--------------------------ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIV 187 P+ +L+ K LQ++ + H+Q+ Sbjct: 65 PMARPDLPELVAHAAKAGLYSNLITSGVLLNAKNLQELADA--GLDHIQL---------- 112 Query: 188 DPQRINPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGI 247 E+ + A H + A + G+ L V+ + Sbjct: 113 -------SFQDAEAESADHIAHMTGA-HAKKL-----EAAQLIKTEGLPLTLNFVIHRQN 159 Query: 248 NDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF-------------RLTIEEGQKIV 294 + + L R++ A T ++ R +EE +K+V Sbjct: 160 CERVPAMLALAEQLGARRVE---------IAHTQYYGWGLLNRNALLPSRTQVEETEKVV 210 Query: 295 ASLKEKISG-----LCQPFYILDLP 314 A + ++SG P Y D P Sbjct: 211 AEARVRLSGRMSIDFVTPDYYADRP 235 >gi|297208902|ref|ZP_06925307.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300913040|ref|ZP_07130478.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus TCH70] gi|296886463|gb|EFH25391.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus ATCC 51811] gi|300885818|gb|EFK81025.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus TCH70] Length = 394 Score = 36.6 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 16/110 (14%) Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 P E + + ++ L I ++C + C C + + Sbjct: 27 PWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTVDPEP 73 Query: 131 TEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 74 LDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 122 >gi|78355756|ref|YP_387205.1| GTP cyclohydrolase subunit MoaA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78218161|gb|ABB37510.1| GTP cyclohydrolase subunit MoaA [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 353 Score = 36.6 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 39/254 (15%), Positives = 85/254 (33%), Gaps = 43/254 (16%) Query: 99 LKLLHVCPVYCRFCFRREMVGS-QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L + C + C +C+ + + ++L ++ + + +V TGG+P + Sbjct: 37 LSVTDRCNLRCMYCWTCDGLSFIPHDSILKYEEMLQLVDA-AVGMGVEKVRLTGGEPFVR 95 Query: 158 SHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH-- 215 ++++L +R + + + L++ G Y+ I + Sbjct: 96 KDFLF--LVESLVRRHPSLDVRITTNA------TLLAGKVAALRDLGVR-YVNISLDTFE 146 Query: 216 --------PYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD--PEILANLMRTFVELR 265 + A+ + GI L +V L+G NDD P L R V++R Sbjct: 147 RERFRRVAGRDMLRHVRRALDEVLEHGIGLKLNAVALRGFNDDELPVFLNFARRNAVDVR 206 Query: 266 IKPYYLHHP-DLAAGTSHF-RLTIEEGQKIVASLKEK-----ISGLCQ---PFYILDLPG 315 G + + + I+ + + + G + P + + G Sbjct: 207 ------FIEFMPMGGCTRWSQENFWPASDILETARRHADLTPVEGRSRRSGPARLYSIEG 260 Query: 316 GYGK----VKIDTH 325 G G+ + H Sbjct: 261 GKGRFGLITPLSDH 274 >gi|152986331|ref|YP_001349180.1| molybdenum cofactor biosynthesis protein A [Pseudomonas aeruginosa PA7] gi|150961489|gb|ABR83514.1| molybdenum cofactor biosynthesis protein A [Pseudomonas aeruginosa PA7] Length = 331 Score = 36.6 bits (84), Expect = 6.4, Method: Composition-based stats. Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 3/84 (3%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L + C C +C +M + VLS ++ A + + TGG+PL+ Sbjct: 19 LSVTDRCDFRCTYCMSEDMQFLPRDQVLSLEELYAVADAFIG-LGVRRIRITGGEPLV-- 75 Query: 159 HKRLQKVLKTLRYIKHVQILRFHS 182 K + +L L ++ L + Sbjct: 76 RKGIAGLLARLGQRPELEDLAITT 99 >gi|310641170|ref|YP_003945928.1| radical sam domain protein [Paenibacillus polymyxa SC2] gi|309246120|gb|ADO55687.1| Radical SAM domain protein [Paenibacillus polymyxa SC2] Length = 376 Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 18/122 (14%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + + H+C + C C +M+ ++ L + L + E + + TGG+P + Sbjct: 36 VEMTVTHLCNMRCEHCAVGDMLVMKEAPFLP---LDLMLKRLDEVEHLETISITGGEPAL 92 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----YIAIH 212 L K + V+ L + +R +IN L ++ K + + I Sbjct: 93 L-DKTVDDVIVPLLKYAKERGIR----------SQINSNLTLDIRRYEKMLPYLDVMHIS 141 Query: 213 AN 214 N Sbjct: 142 FN 143 >gi|304410843|ref|ZP_07392460.1| Radical SAM domain protein [Shewanella baltica OS183] gi|307304986|ref|ZP_07584736.1| Radical SAM domain protein [Shewanella baltica BA175] gi|304350740|gb|EFM15141.1| Radical SAM domain protein [Shewanella baltica OS183] gi|306912388|gb|EFN42812.1| Radical SAM domain protein [Shewanella baltica BA175] Length = 295 Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 2/84 (2%) Query: 97 ILLKLLHVCPVY-CRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 ++L++ + C C FC K + LA + + + V GD + Sbjct: 19 LILQVTNGCSWNQCSFCDMYTQPQKAFRAQKLDKVEQDILAVARSGAPVSRVFLADGDAM 78 Query: 156 ILSHKRLQKVLKTL-RYIKHVQIL 178 L RL+ + + + R++ V + Sbjct: 79 SLPFARLEAICELINRHLPQVTRI 102 >gi|261417330|ref|YP_003251013.1| Radical SAM domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|261373786|gb|ACX76531.1| Radical SAM domain protein [Fibrobacter succinogenes subsp. succinogenes S85] gi|302325710|gb|ADL24911.1| radical SAM domain protein [Fibrobacter succinogenes subsp. succinogenes S85] Length = 224 Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 27/60 (45%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + LH C + C +C V +S + AA+ + +S + V TGG+PLI Sbjct: 21 AVFVRLHGCNLRCSYCDSMYAVEGPDFKQMSVGEVLAAVEMYRNESGVKCVTLTGGEPLI 80 >gi|169835697|ref|ZP_02868885.1| putative anaerobic ribonucleoside-triphosphate reductase activating protein [candidate division TM7 single-cell isolate TM7a] Length = 157 Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 21/60 (35%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C C C G L+ + E I E + + + +GGDPL L+ Sbjct: 25 GCSHACPGCHNEYSWNPNHGNTLTYEILEKIAKEINENTLLDGITISGGDPLFNPIDMLK 84 >gi|149917134|ref|ZP_01905634.1| Radical SAM [Plesiocystis pacifica SIR-1] gi|149822050|gb|EDM81443.1| Radical SAM [Plesiocystis pacifica SIR-1] Length = 381 Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 6/68 (8%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 P+R++L + C + C C E + +V D +++ ++ + TGG+ Sbjct: 39 PNRLVLDVTRRCNLRCSMCRTWEDPRRDELSVPEIADI------MRQLPRLTWLDVTGGE 92 Query: 154 PLILSHKR 161 P + + Sbjct: 93 PFLRKDAK 100 >gi|197117748|ref|YP_002138175.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] gi|197087108|gb|ACH38379.1| radical SAM domain iron-sulfur cluster-binding oxidoreductase [Geobacter bemidjiensis Bem] Length = 445 Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 17/84 (20%), Positives = 38/84 (45%), Gaps = 7/84 (8%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG- 151 YP ++ ++ C + C C ++ GS + LS + +A + + ++ G Sbjct: 22 YPSKLFVEATSRCNLNCVMCMKQNSGGSVRDGDLSPEIFQALEPALAN---LDALVLNGV 78 Query: 152 GDPLILSHKRLQKVLKTL-RYIKH 174 G+PLI + RL++ + + + Sbjct: 79 GEPLI--NTRLEQYISHAKSRMPN 100 >gi|21283546|ref|NP_646634.1| hypothetical protein MW1817 [Staphylococcus aureus subsp. aureus MW2] gi|49486695|ref|YP_043916.1| hypothetical protein SAS1799 [Staphylococcus aureus subsp. aureus MSSA476] gi|21204987|dbj|BAB95682.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MW2] gi|49245138|emb|CAG43604.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MSSA476] Length = 383 Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 16/110 (14%) Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 P E + + ++ L I ++C + C C + + Sbjct: 16 PWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTVDPEP 62 Query: 131 TEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 63 LDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 111 >gi|15924867|ref|NP_372401.1| hypothetical protein SAV1877 [Staphylococcus aureus subsp. aureus Mu50] gi|15927451|ref|NP_374984.1| hypothetical protein SA1693 [Staphylococcus aureus subsp. aureus N315] gi|148268349|ref|YP_001247292.1| YfkB-like domain-containing protein [Staphylococcus aureus subsp. aureus JH9] gi|150394411|ref|YP_001317086.1| YfkB-like domain-containing protein [Staphylococcus aureus subsp. aureus JH1] gi|156980193|ref|YP_001442452.1| hypothetical protein SAHV_1862 [Staphylococcus aureus subsp. aureus Mu3] gi|253314938|ref|ZP_04838151.1| hypothetical protein SauraC_01935 [Staphylococcus aureus subsp. aureus str. CF-Marseille] gi|255006665|ref|ZP_05145266.2| hypothetical protein SauraM_09355 [Staphylococcus aureus subsp. aureus Mu50-omega] gi|258408911|ref|ZP_05681193.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|258430043|ref|ZP_05688413.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|258443439|ref|ZP_05691781.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|258445297|ref|ZP_05693488.1| conserved hypothetical protein [Staphylococcus aureus A6300] gi|258447861|ref|ZP_05695995.1| conserved hypothetical protein [Staphylococcus aureus A6224] gi|258453294|ref|ZP_05701279.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|269203514|ref|YP_003282783.1| hypothetical protein SAAV_1927 [Staphylococcus aureus subsp. aureus ED98] gi|282894542|ref|ZP_06302770.1| hypothetical protein SGAG_01890 [Staphylococcus aureus A8117] gi|282928049|ref|ZP_06335656.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|295407255|ref|ZP_06817054.1| hypothetical protein SMAG_02428 [Staphylococcus aureus A8819] gi|296275890|ref|ZP_06858397.1| hypothetical protein SauraMR_06062 [Staphylococcus aureus subsp. aureus MR1] gi|297246218|ref|ZP_06930069.1| hypothetical protein SLAG_02300 [Staphylococcus aureus A8796] gi|13701670|dbj|BAB42963.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus N315] gi|14247649|dbj|BAB58039.1| similar to thioredoxin-like oxidoreductases [Staphylococcus aureus subsp. aureus Mu50] gi|147741418|gb|ABQ49716.1| YfkB-like domain [Staphylococcus aureus subsp. aureus JH9] gi|149946863|gb|ABR52799.1| YfkB-like domain protein [Staphylococcus aureus subsp. aureus JH1] gi|156722328|dbj|BAF78745.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus Mu3] gi|257840358|gb|EEV64820.1| conserved hypothetical protein [Staphylococcus aureus A9763] gi|257849637|gb|EEV73605.1| conserved hypothetical protein [Staphylococcus aureus A9299] gi|257851324|gb|EEV75264.1| conserved hypothetical protein [Staphylococcus aureus A8115] gi|257855815|gb|EEV78739.1| conserved hypothetical protein [Staphylococcus aureus A6300] gi|257858793|gb|EEV81662.1| conserved hypothetical protein [Staphylococcus aureus A6224] gi|257864502|gb|EEV87245.1| conserved hypothetical protein [Staphylococcus aureus A5937] gi|262075804|gb|ACY11777.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ED98] gi|282590113|gb|EFB95194.1| conserved hypothetical protein [Staphylococcus aureus A10102] gi|282763029|gb|EFC03161.1| hypothetical protein SGAG_01890 [Staphylococcus aureus A8117] gi|285817557|gb|ADC38044.1| Hypothetical protein SA2981_1833 [Staphylococcus aureus 04-02981] gi|294967830|gb|EFG43860.1| hypothetical protein SMAG_02428 [Staphylococcus aureus A8819] gi|297176925|gb|EFH36182.1| hypothetical protein SLAG_02300 [Staphylococcus aureus A8796] gi|312830249|emb|CBX35091.1| radical SAM superfamily protein [Staphylococcus aureus subsp. aureus ECT-R 2] gi|315129317|gb|EFT85311.1| hypothetical protein CGSSa03_08645 [Staphylococcus aureus subsp. aureus CGS03] gi|329724779|gb|EGG61283.1| YfkB-like domain protein [Staphylococcus aureus subsp. aureus 21172] Length = 383 Score = 36.6 bits (84), Expect = 6.5, Method: Composition-based stats. Identities = 20/110 (18%), Positives = 40/110 (36%), Gaps = 16/110 (14%) Query: 71 PEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 P E + + ++ L I ++C + C C + + Sbjct: 16 PWESYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTVDPEP 62 Query: 131 TEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 63 LDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 111 >gi|282600001|ref|ZP_05972682.2| putative pyruvate formate-lyase activating enzyme [Providencia rustigianii DSM 4541] gi|282566719|gb|EFB72254.1| putative pyruvate formate-lyase activating enzyme [Providencia rustigianii DSM 4541] Length = 317 Score = 36.6 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 21/61 (34%), Gaps = 11/61 (18%) Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILA-------NLMRT--FVELRIKPYYLHH 273 RL G ++ + L++G ND + + L + + I PY H Sbjct: 215 VRRNFERLMELGANVVMRMPLVRGCNDSFDAITGAIEYAMELSKRGNLNRIDILPY--HQ 272 Query: 274 P 274 Sbjct: 273 L 273 >gi|212690607|ref|ZP_03298735.1| hypothetical protein BACDOR_00093 [Bacteroides dorei DSM 17855] gi|212666853|gb|EEB27425.1| hypothetical protein BACDOR_00093 [Bacteroides dorei DSM 17855] Length = 472 Score = 36.6 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 89 IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 I H+ Y +RI+ L L + C C +C + L+ ++ + +Q+ Sbjct: 75 IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + G DPL + + + ++T+ IKH Sbjct: 135 KRLALEAGEDPLRNPIEYILESIRTIYSIKH 165 >gi|73662225|ref|YP_301006.1| hypothetical protein SSP0916 [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] gi|72494740|dbj|BAE18061.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305] Length = 379 Score = 36.6 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 20/112 (17%), Positives = 41/112 (36%), Gaps = 12/112 (10%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ P E + + +++ L I ++C + C C + + L Sbjct: 15 IHNDPWEAYNDMQEHDRLTLSNIE--------FTTTNLCNMRCSHCAVGYTLQTTDPDPL 66 Query: 127 SSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 L I + + TGG+P + S K ++ V+K L H + + Sbjct: 67 PMDLIYRRLDEI---PDLKTMSITGGEP-MFSKKSIRNVVKPLLKYAHSRGI 114 >gi|49484118|ref|YP_041342.1| hypothetical protein SAR1967 [Staphylococcus aureus subsp. aureus MRSA252] gi|257426009|ref|ZP_05602431.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257428682|ref|ZP_05605077.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257431292|ref|ZP_05607668.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257434010|ref|ZP_05610361.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257436914|ref|ZP_05612956.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|282906280|ref|ZP_06314132.1| radical SAM superfamily domain-containing protein [Staphylococcus aureus subsp. aureus Btn1260] gi|282909196|ref|ZP_06317012.1| radical SAM superfamily domain-containing protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282911502|ref|ZP_06319302.1| radical SAM superfamily domain-containing protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282914674|ref|ZP_06322459.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus M899] gi|282925115|ref|ZP_06332775.1| hypothetical protein SARG_02404 [Staphylococcus aureus subsp. aureus C101] gi|283958638|ref|ZP_06376084.1| radical SAM superfamily domain-containing protein [Staphylococcus aureus subsp. aureus A017934/97] gi|293507751|ref|ZP_06667593.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 58-424] gi|293510769|ref|ZP_06669471.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M809] gi|293539308|ref|ZP_06671987.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus M1015] gi|295428458|ref|ZP_06821085.1| hypothetical protein SIAG_02227 [Staphylococcus aureus subsp. aureus EMRSA16] gi|49242247|emb|CAG40954.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus MRSA252] gi|257271152|gb|EEV03309.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 55/2053] gi|257274326|gb|EEV05838.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 65-1322] gi|257277941|gb|EEV08597.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 68-397] gi|257280936|gb|EEV11080.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus E1410] gi|257283703|gb|EEV13828.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M876] gi|282313073|gb|EFB43471.1| hypothetical protein SARG_02404 [Staphylococcus aureus subsp. aureus C101] gi|282321388|gb|EFB51714.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus M899] gi|282324511|gb|EFB54823.1| radical SAM superfamily domain-containing protein [Staphylococcus aureus subsp. aureus WBG10049] gi|282326764|gb|EFB57061.1| radical SAM superfamily domain-containing protein [Staphylococcus aureus subsp. aureus WW2703/97] gi|282330477|gb|EFB59994.1| radical SAM superfamily domain-containing protein [Staphylococcus aureus subsp. aureus Btn1260] gi|283789678|gb|EFC28500.1| radical SAM superfamily domain-containing protein [Staphylococcus aureus subsp. aureus A017934/97] gi|290919843|gb|EFD96912.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus M1015] gi|291094814|gb|EFE25082.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus 58-424] gi|291466400|gb|EFF08924.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus M809] gi|295127440|gb|EFG57079.1| hypothetical protein SIAG_02227 [Staphylococcus aureus subsp. aureus EMRSA16] Length = 383 Score = 36.6 bits (84), Expect = 6.6, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ P E + + ++ L I ++C + C C + Sbjct: 12 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 58 Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 59 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 111 >gi|237725196|ref|ZP_04555677.1| thiamine biosynthesis protein ThiH [Bacteroides sp. D4] gi|229436462|gb|EEO46539.1| thiamine biosynthesis protein ThiH [Bacteroides dorei 5_1_36/D4] Length = 472 Score = 36.2 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 89 IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 I H+ Y +RI+ L L + C C +C + L+ ++ + +Q+ Sbjct: 75 IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + G DPL + + + ++T+ IKH Sbjct: 135 KRLALEAGEDPLRNPIEYILESIRTIYSIKH 165 >gi|312437658|gb|ADQ76729.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus TCH60] Length = 394 Score = 36.2 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ P E + + ++ L I ++C + C C + Sbjct: 23 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 69 Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 70 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 122 >gi|150002946|ref|YP_001297690.1| thiamine biosynthesis protein ThiH [Bacteroides vulgatus ATCC 8482] gi|254884684|ref|ZP_05257394.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 4_3_47FAA] gi|294776606|ref|ZP_06742075.1| thiazole biosynthesis protein ThiH [Bacteroides vulgatus PC510] gi|319642353|ref|ZP_07997008.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_40A] gi|149931370|gb|ABR38068.1| thiamine biosynthesis protein ThiH [Bacteroides vulgatus ATCC 8482] gi|254837477|gb|EET17786.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 4_3_47FAA] gi|294449521|gb|EFG18052.1| thiazole biosynthesis protein ThiH [Bacteroides vulgatus PC510] gi|317386013|gb|EFV66937.1| thiamine biosynthesis protein ThiH [Bacteroides sp. 3_1_40A] Length = 472 Score = 36.2 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 5/91 (5%) Query: 89 IVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ 143 I H+ Y +RI+ L L + C C +C + L+ ++ + +Q+ Sbjct: 75 IKHKFYGNRIVMFAPLYLSNYCVNGCVYCPYHLKNKTIARKKLTQEEIRKEVIALQDMGH 134 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + G DPL + + + ++T+ IKH Sbjct: 135 KRLALEAGEDPLRNPIEYILESIQTIYSIKH 165 >gi|21674976|ref|NP_663041.1| translation initiation factor IF-1 [Chlorobium tepidum TLS] gi|193211873|ref|YP_001997826.1| translation initiation factor IF-1 [Chlorobaculum parvum NCIB 8327] gi|25008603|sp|Q8KAJ3|IF1_CHLTE RecName: Full=Translation initiation factor IF-1 gi|21648209|gb|AAM73383.1| translation initiation factor IF-1 [Chlorobium tepidum TLS] gi|193085350|gb|ACF10626.1| translation initiation factor IF-1 [Chlorobaculum parvum NCIB 8327] Length = 72 Score = 36.2 bits (83), Expect = 6.6, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Query: 279 GTSHFRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKK 329 + FR+ +E G + + +SG + YI LPG KV+I +++ K Sbjct: 18 PNAQFRVKLENGLE----VLAHVSGKIRMHYIRILPGDKVKVQISPYDLSK 64 >gi|308369956|ref|ZP_07419659.2| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu002] gi|308325958|gb|EFP14809.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu002] Length = 351 Score = 36.2 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L ++ C + CR+C + +LS K+ A + + +V TGG+PLI Sbjct: 23 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 81 Query: 158 SHKRLQKVLKTLRY 171 L ++++TL Sbjct: 82 PD--LPEIVRTLSA 93 >gi|304310967|ref|YP_003810565.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium HdN1] gi|301796700|emb|CBL44912.1| Molybdenum cofactor biosynthesis protein A [gamma proteobacterium HdN1] Length = 332 Score = 36.2 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 44/207 (21%), Positives = 84/207 (40%), Gaps = 33/207 (15%) Query: 92 RYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R + L + C C +C +M + VLS ++ + A + ++ TG Sbjct: 13 RKVTYLRLSVTDRCDFRCVYCMSEQMQFLPRSQVLSLEEMQTIAAVFVG-LGVTKIRLTG 71 Query: 152 GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIA 210 G+PL+ +++ L ++ ++ + + ++ +L + LKEAG + I+ Sbjct: 72 GEPLVRKDCV--SLVRGLSELEGLKEITLTTNG-----NQL-AQLAKPLKEAGLGRINIS 123 Query: 211 IHANHPYEFSEEAIAAISR---LAN--AGI----------ILLSQSVLLKGINDDPEILA 255 + + E AI+R L+ AGI L+ +V++KG NDD + Sbjct: 124 L-----DSLNPEKFHAITRTGQLSQVLAGIDAAVDAGFDGTKLN-AVIMKGRNDD--EII 175 Query: 256 NLMRTFVELRIKPYYLHHPDLAAGTSH 282 L V + Y+ L G +H Sbjct: 176 ALAEYAVSKGVDITYIEEMPLGEGINH 202 >gi|332827435|gb|EGK00187.1| hypothetical protein HMPREF9455_03519 [Dysgonomonas gadei ATCC BAA-286] Length = 342 Score = 36.2 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 15/68 (22%), Positives = 33/68 (48%), Gaps = 3/68 (4%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 +L C + CR+C+ ++ G+Q + S L + + I + TGG+P + Sbjct: 14 FELTDKCNLACRYCYNIWKIPGAQHQSFNSYNKAIKTLKQVFSQVDIRNITLTGGEPFVA 73 Query: 158 SHKRLQKV 165 +R++++ Sbjct: 74 --QRIKEI 79 >gi|170732703|ref|YP_001764650.1| alpha/beta hydrolase fold [Burkholderia cenocepacia MC0-3] gi|169815945|gb|ACA90528.1| alpha/beta hydrolase fold [Burkholderia cenocepacia MC0-3] Length = 589 Score = 36.2 bits (83), Expect = 6.7, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 4/54 (7%) Query: 291 QKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNG----SYCITDH 340 Q+++ + ++ G P I+D+ G+G+ +D + +G + D+ Sbjct: 390 QELIGAAIGRLRGHGTPVRIVDIAAGHGRYVLDAIALAAERDGAAPDDITLRDY 443 >gi|329847364|ref|ZP_08262392.1| tRNA-i6A37 thiotransferase enzyme MiaB [Asticcacaulis biprosthecum C19] gi|328842427|gb|EGF91996.1| tRNA-i6A37 thiotransferase enzyme MiaB [Asticcacaulis biprosthecum C19] Length = 448 Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 22/118 (18%), Positives = 37/118 (31%), Gaps = 18/118 (15%) Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKDTEAA-----LAYIQEKSQIWE 146 L + C +C FC R +L AA L + + + Sbjct: 152 TAFLTVQEGCDKFCTFCVVPYTRGAEWSRPVAAILDEAQALAAKGVRELTLLGQN--VNA 209 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G D L K++ L I + LR+ + P + +LI ++ G Sbjct: 210 FNGVGSDG---QPSTLAKLMYALADIPGIDRLRYTTSHPND----MGDDLIAAHRDLG 260 >gi|260891523|ref|ZP_05902786.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Leptotrichia hofstadii F0254] gi|260858906|gb|EEX73406.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Leptotrichia hofstadii F0254] Length = 126 Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 23/60 (38%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQ 163 C C C + G +L+ + E I E + + + +GGDPL L+ Sbjct: 43 GCSHSCPGCHNEYSWNPKHGNLLTYEKLEEIAKEINENTLLDGITISGGDPLFNPVDMLK 102 >gi|162148088|ref|YP_001602549.1| hypothetical protein GDI_2305 [Gluconacetobacter diazotrophicus PAl 5] gi|209542702|ref|YP_002274931.1| MiaB-like tRNA modifying enzyme [Gluconacetobacter diazotrophicus PAl 5] gi|161786665|emb|CAP56248.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus PAl 5] gi|209530379|gb|ACI50316.1| MiaB-like tRNA modifying enzyme [Gluconacetobacter diazotrophicus PAl 5] Length = 420 Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 17/120 (14%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R +++ C C FC +V E A + E++ TG D Sbjct: 130 RTRAFVEVQQGCDHRCTFCII-PFGRGPSRSVPVGAVVEQVRALVAS--GYREIVLTGVD 186 Query: 154 PLILSH-------KRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 I S L ++ + L + ++ LR S VDP I+ +L + L + G+ Sbjct: 187 --ITSWGGDLPGRPALGQLCRRVLALVPELERLRLSS----VDPVEIDDDLWRLLAQEGR 240 >gi|57117055|ref|YP_177925.1| molybdenum cofactor biosynthesis protein A [Mycobacterium tuberculosis H37Rv] gi|121638994|ref|YP_979218.1| putative molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|148662963|ref|YP_001284486.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium tuberculosis H37Ra] gi|148824301|ref|YP_001289055.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis F11] gi|224991486|ref|YP_002646175.1| putative molybdenum cofactor biosynthesis protein A [Mycobacterium bovis BCG str. Tokyo 172] gi|253797790|ref|YP_003030791.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis KZN 1435] gi|254365737|ref|ZP_04981782.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis str. Haarlem] gi|260202251|ref|ZP_05769742.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis T46] gi|260206444|ref|ZP_05773935.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis K85] gi|289444673|ref|ZP_06434417.1| molybdenum cofactor biosynthesis protein A [Mycobacterium tuberculosis T46] gi|289553099|ref|ZP_06442309.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis KZN 605] gi|289571317|ref|ZP_06451544.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis T17] gi|289575821|ref|ZP_06456048.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis K85] gi|289746919|ref|ZP_06506297.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium tuberculosis 02_1987] gi|289751785|ref|ZP_06511163.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis T92] gi|289755228|ref|ZP_06514606.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium tuberculosis EAS054] gi|289759236|ref|ZP_06518614.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis T85] gi|289763289|ref|ZP_06522667.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis GM 1503] gi|297635744|ref|ZP_06953524.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis KZN 4207] gi|297732742|ref|ZP_06961860.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis KZN R506] gi|306804898|ref|ZP_07441566.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu008] gi|306809089|ref|ZP_07445757.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu007] gi|313660075|ref|ZP_07816955.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis KZN V2475] gi|3024133|sp|O05786|MOAA1_MYCTU RecName: Full=Molybdenum cofactor biosynthesis protein A 1 gi|38490320|emb|CAE55548.1| PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A MOAA1 [Mycobacterium tuberculosis H37Rv] gi|121494642|emb|CAL73123.1| Probable molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium bovis BCG str. Pasteur 1173P2] gi|134151250|gb|EBA43295.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis str. Haarlem] gi|148507115|gb|ABQ74924.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium tuberculosis H37Ra] gi|148722828|gb|ABR07453.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis F11] gi|224774601|dbj|BAH27407.1| putative molybdenum cofactor biosynthesis protein A [Mycobacterium bovis BCG str. Tokyo 172] gi|253319293|gb|ACT23896.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis KZN 1435] gi|289417592|gb|EFD14832.1| molybdenum cofactor biosynthesis protein A [Mycobacterium tuberculosis T46] gi|289437731|gb|EFD20224.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis KZN 605] gi|289540252|gb|EFD44830.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis K85] gi|289545071|gb|EFD48719.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis T17] gi|289687447|gb|EFD54935.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium tuberculosis 02_1987] gi|289692372|gb|EFD59801.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis T92] gi|289695815|gb|EFD63244.1| molybdenum cofactor biosynthesis protein A1 [Mycobacterium tuberculosis EAS054] gi|289710795|gb|EFD74811.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis GM 1503] gi|289714800|gb|EFD78812.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis T85] gi|308344666|gb|EFP33517.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu007] gi|308348616|gb|EFP37467.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis SUMu008] gi|323718340|gb|EGB27518.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis CDC1551A] gi|326902668|gb|EGE49601.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis W-148] gi|328457569|gb|AEB02992.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis KZN 4207] Length = 359 Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L ++ C + CR+C + +LS K+ A + + +V TGG+PLI Sbjct: 31 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 89 Query: 158 SHKRLQKVLKTLRY 171 L ++++TL Sbjct: 90 PD--LPEIVRTLSA 101 >gi|319892917|ref|YP_004149792.1| hypothetical protein SPSINT_1628 [Staphylococcus pseudintermedius HKU10-03] gi|317162613|gb|ADV06156.1| Hypothetical protein SPSINT_1628 [Staphylococcus pseudintermedius HKU10-03] Length = 379 Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 4/75 (5%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + ++C + C C + ++ +L L I + + TGG+P + Sbjct: 33 VEFTTTNLCNMRCSHCAVGYTLQTKDPDILPMSLILQRLDEI---PTLRTISITGGEP-M 88 Query: 157 LSHKRLQKVLKTLRY 171 S K +++V+K L Sbjct: 89 FSKKSIREVVKPLLK 103 >gi|260188145|ref|ZP_05765619.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis CPHL_A] gi|289448788|ref|ZP_06438532.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis CPHL_A] gi|289421746|gb|EFD18947.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis CPHL_A] Length = 359 Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L ++ C + CR+C + +LS K+ A + + +V TGG+PLI Sbjct: 31 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 89 Query: 158 SHKRLQKVLKTLRY 171 L ++++TL Sbjct: 90 PD--LPEIVRTLSA 101 >gi|31794288|ref|NP_856781.1| molybdenum cofactor biosynthesis protein A [Mycobacterium bovis AF2122/97] gi|59798458|sp|Q7TX84|MOAA1_MYCBO RecName: Full=Molybdenum cofactor biosynthesis protein A 1 gi|31619883|emb|CAD96823.1| PROBABLE MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A MOAA1 [Mycobacterium bovis AF2122/97] Length = 359 Score = 36.2 bits (83), Expect = 6.8, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L ++ C + CR+C + +LS K+ A + + +V TGG+PLI Sbjct: 31 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 89 Query: 158 SHKRLQKVLKTLRY 171 L ++++TL Sbjct: 90 PD--LPEIVRTLSA 101 >gi|222053130|ref|YP_002535492.1| radical SAM protein [Geobacter sp. FRC-32] gi|221562419|gb|ACM18391.1| Radical SAM domain protein [Geobacter sp. FRC-32] Length = 359 Score = 36.2 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 41/221 (18%), Positives = 73/221 (33%), Gaps = 42/221 (19%) Query: 94 PDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG 152 P I + C + C C ++ S+ ++ + + L I + S+ V+ +GG Sbjct: 7 PKWIAWETTQKCNLKCVHCRCSSDLTSSEGD--FTTDEGKKLLKEIADFSKP-VVVLSGG 63 Query: 153 DPLILSH-KRLQKVLKTLRYIKHVQILRFHSRV-PIVDPQRINPELIQCLKEAGKPVY-- 208 +PL+ L +L R+ + + E+ Q +KEA + Sbjct: 64 EPLMRQDIFELAGYGTSL-----------GLRMCMATNGALVTDEVCQKMKEADIKMVSL 112 Query: 209 ------IAIHAN---HPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 A+H N P F AA G L S K + +AN + Sbjct: 113 SLDGSTAAVHDNFRQCPGAFDGVVRAA-ELFRKHGQKFLINSSFTK---RNQNDIANTFK 168 Query: 260 TFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEK 300 L +Y+ + G++I+ L K Sbjct: 169 VAKSLGATAWYMFM----------IVPTGRGEEIMNELISK 199 >gi|134301127|ref|YP_001114623.1| radical SAM domain-containing protein [Desulfotomaculum reducens MI-1] gi|134053827|gb|ABO51798.1| Radical SAM domain protein [Desulfotomaculum reducens MI-1] Length = 450 Score = 36.2 bits (83), Expect = 6.9, Method: Composition-based stats. Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 10/98 (10%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDRIL-LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 DP + G+V + L L H C + C++CF E +LS++ Sbjct: 73 FTTDPHQEGYRPKRDGVV-----KALCLHAAHDCNLRCKYCFAGEGKFGGPSGLLSAETG 127 Query: 132 EAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVL 166 AA+ ++ + S E+ F GG+PL L+ K +++++ Sbjct: 128 RAAIDFLIQHSGNRKHVEIDFFGGEPL-LNFKVIKELV 164 >gi|255261246|ref|ZP_05340588.1| phosphate butyryltransferase [Thalassiobium sp. R2A62] gi|255103581|gb|EET46255.1| phosphate butyryltransferase [Thalassiobium sp. R2A62] Length = 76 Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 14/67 (20%) Query: 172 IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH--ANHPYEFSEEAIAAISR 229 I ++ + S + +L + LK+ + + + H ANHP +++ + + Sbjct: 3 IPTLKRICIAS----------DADLTRTLKKLDQKIMLVTHGDANHPKHINKDTVK--TA 50 Query: 230 LANAGII 236 LA G Sbjct: 51 LAAHGWT 57 >gi|224024935|ref|ZP_03643301.1| hypothetical protein BACCOPRO_01666 [Bacteroides coprophilus DSM 18228] gi|224018171|gb|EEF76169.1| hypothetical protein BACCOPRO_01666 [Bacteroides coprophilus DSM 18228] Length = 432 Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 20/116 (17%) Query: 97 ILLKLLHVCPVYCRFCFR----REMVGSQKGTVLSSKDTE-----AALAYIQEKSQIWEV 147 LK+ C C +C V +L I + E+ Sbjct: 138 AYLKISEGCDRKCSYCAIPIITGRHVSRPMEEILDEVRLLVSQGVKEFQVIAQ-----EL 192 Query: 148 IFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 + G D + + L ++++ + I V+ +R H P P+ +L + ++E Sbjct: 193 TYYGVD--LYKKQMLPELIEKMAEIPGVEWIRLHYAYPAAFPE----DLFRVMREH 242 >gi|149069513|gb|EDM18954.1| molybdenum cofactor synthesis 1 (predicted), isoform CRA_c [Rattus norvegicus] Length = 636 Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146 G H Y + + L C + CR+C E V + K +L++++ LA + K + + Sbjct: 66 GRQHSY---LRISLTEKCNLRCRYCMPEEGVSLTPKADLLTTEEILT-LARLFVKEGVDK 121 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + TGG+PLI ++ L ++ ++ + Sbjct: 122 IRLTGGEPLIRPDVV--DIVARLHQLEGLRTI 151 >gi|313902209|ref|ZP_07835617.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter subterraneus DSM 13965] gi|313467544|gb|EFR63050.1| oxygen-independent coproporphyrinogen III oxidase [Thermaerobacter subterraneus DSM 13965] Length = 482 Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 4/79 (5%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT----GG 152 L + C C +C + +G E L + + + + GG Sbjct: 103 ALYIHVPYCRQRCYYCDFNTYLLDPEGKRRYLAALERELDLLAADPGLTRPLVSVFVGGG 162 Query: 153 DPLILSHKRLQKVLKTLRY 171 P +L L+++L+ + Sbjct: 163 TPSLLEPAELERLLEAVHR 181 >gi|260424643|ref|ZP_05778954.1| RNA modification enzyme, MiaB family [Dialister invisus DSM 15470] gi|260402668|gb|EEW96215.1| RNA modification enzyme, MiaB family [Dialister invisus DSM 15470] Length = 433 Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 34/182 (18%), Positives = 68/182 (37%), Gaps = 36/182 (19%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAY-IQEKSQI-WEVIF 149 P +K+ C C FC+ + G+ + + S + + + ++E + I + F Sbjct: 127 PYSAYIKIAEGCSNGCTFCYIPYVRGAMRSRSIPSVVHEVKRLSSEGVREFNLIAQDSSF 186 Query: 150 TGGDPLILSH-KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV- 207 G D L+ L ++LK L I +V+ +R + P + EL++ + + K Sbjct: 187 YGRD---LNDGTTLARLLKELVKIDNVKWIRL----FYLYPTYFDDELLEIITKEEKICK 239 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRIK 267 Y+ I H S+ + + R D + + L++ Sbjct: 240 YVDIPLQH---ISDSVLRRMHRR------------------DSSQSIKKLLKKLRNT--T 276 Query: 268 PY 269 PY Sbjct: 277 PY 278 >gi|227500638|ref|ZP_03930687.1| thiamine biosynthesis protein ThiH [Anaerococcus tetradius ATCC 35098] gi|227217225|gb|EEI82569.1| thiamine biosynthesis protein ThiH [Anaerococcus tetradius ATCC 35098] Length = 472 Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 20/117 (17%), Positives = 46/117 (39%), Gaps = 5/117 (4%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRILLKL----LHVCPVYCRFCFRREM 117 E +L +E+ + + + + + H+ Y +RI+L + C C +C Sbjct: 51 SHREAFVLLSCKEEDLNEEIFNLARELKHKFYANRIVLFAPLYLSNYCVNGCSYCPYHGQ 110 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 + L+ + + +Q+ + G DP+ + + + + T+ IKH Sbjct: 111 NKTIPRRKLTQDEIREQVIALQDLGHKRLALEAGEDPIHNPLEYILESIHTIYNIKH 167 >gi|53719965|ref|YP_108951.1| putative pyruvate radical-activating enzyme [Burkholderia pseudomallei K96243] gi|53725684|ref|YP_102410.1| radical SAM domain-containing protein [Burkholderia mallei ATCC 23344] gi|76811377|ref|YP_334194.1| radical SAM domain-containing protein [Burkholderia pseudomallei 1710b] gi|121598521|ref|YP_993691.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei SAVP1] gi|124384170|ref|YP_001028848.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei NCTC 10229] gi|126440040|ref|YP_001059711.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei 668] gi|126450188|ref|YP_001081241.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei NCTC 10247] gi|167001134|ref|ZP_02266935.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei PRL-20] gi|167720455|ref|ZP_02403691.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei DM98] gi|167739449|ref|ZP_02412223.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei 14] gi|167825055|ref|ZP_02456526.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei 9] gi|167895144|ref|ZP_02482546.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei 7894] gi|167903530|ref|ZP_02490735.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei NCTC 13177] gi|167911777|ref|ZP_02498868.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei 112] gi|167919782|ref|ZP_02506873.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei BCC215] gi|238562381|ref|ZP_00440588.2| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei GB8 horse 4] gi|254184291|ref|ZP_04890881.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia pseudomallei 1655] gi|254261769|ref|ZP_04952823.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia pseudomallei 1710a] gi|52210379|emb|CAH36360.1| putative pyruvate radical-activating enzyme [Burkholderia pseudomallei K96243] gi|52429107|gb|AAU49700.1| radical SAM domain protein [Burkholderia mallei ATCC 23344] gi|76580830|gb|ABA50305.1| radical SAM domain protein [Burkholderia pseudomallei 1710b] gi|121227331|gb|ABM49849.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei SAVP1] gi|124292190|gb|ABN01459.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei NCTC 10229] gi|126219533|gb|ABN83039.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei 668] gi|126243058|gb|ABO06151.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei NCTC 10247] gi|184214822|gb|EDU11865.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia pseudomallei 1655] gi|238522812|gb|EEP86254.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei GB8 horse 4] gi|243063082|gb|EES45268.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia mallei PRL-20] gi|254220458|gb|EET09842.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia pseudomallei 1710a] Length = 239 Score = 36.2 bits (83), Expect = 7.0, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%) Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150 YP + + + CP C +C Q + + + +A LA++ + I V+F+ Sbjct: 24 YPGQFAAVVFVQGCPWRCGYC---HNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFS 80 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178 GG+P I L I V+ L Sbjct: 81 GGEPSI--DPALA------ASIDDVRRL 100 >gi|328552419|gb|AEB22911.1| YfkA [Bacillus amyloliquefaciens TA208] gi|328910769|gb|AEB62365.1| hypothetical protein LL3_00820 [Bacillus amyloliquefaciens LL3] Length = 373 Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 22/121 (18%), Positives = 42/121 (34%), Gaps = 16/121 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + +C + C C + + L L I + + TGG+P + Sbjct: 34 VEFTTTTLCNMRCEHCAVGYTLQPKDPNALPLDLLLKRLEEI---PLLRSISITGGEP-M 89 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK--PVYIAIHAN 214 LS K +++ + L H + +R +IN L + + P +H + Sbjct: 90 LSLKSVKEYVVPLLKYAHERGVR----------TQINSNLTLDIGRYERIIPYLDVLHIS 139 Query: 215 H 215 H Sbjct: 140 H 140 >gi|298526582|ref|ZP_07013991.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis 94_M4241A] gi|298496376|gb|EFI31670.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis 94_M4241A] Length = 359 Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L ++ C + CR+C + +LS K+ A + + +V TGG+PLI Sbjct: 31 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 89 Query: 158 SHKRLQKVLKTLRY 171 L ++++TL Sbjct: 90 PD--LPEIVRTLSA 101 >gi|289549352|ref|YP_003474340.1| MiaB-like tRNA modifying enzyme [Thermocrinis albus DSM 14484] gi|289182969|gb|ADC90213.1| MiaB-like tRNA modifying enzyme [Thermocrinis albus DSM 14484] Length = 407 Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 40/179 (22%), Positives = 65/179 (36%), Gaps = 38/179 (21%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGG- 152 R +K+ C +C FC G + +V K E ++ + EV+ TG Sbjct: 138 RSRPFVKIQEGCNKFCSFCVIPYARGKVR-SVPPQKVLEEI--HLLAQKGFEEVVITGTQ 194 Query: 153 ------DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 D L K+LK + I+ ++++R S + P + EL+ + E K Sbjct: 195 LSQYGWDMGT----TLGKLLKEMVKIEGIKLIRLSS----LHPAELEEELLTIITEEEK- 245 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELR 265 IA H + P + S I +L G P+ L+ VE R Sbjct: 246 --IAPHFHLPLQ-SGSLR--ILQLMERGYT--------------PDEYRRLVEKLVEKR 285 >gi|256061056|ref|ZP_05451212.1| molybdenum cofactor biosynthesis protein A [Brucella neotomae 5K33] gi|261325058|ref|ZP_05964255.1| molybdenum cofactor biosynthesis protein A [Brucella neotomae 5K33] gi|261301038|gb|EEY04535.1| molybdenum cofactor biosynthesis protein A [Brucella neotomae 5K33] Length = 344 Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 25/165 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLR------YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 K + ++ L + + + S++ R EL C + + +++ Sbjct: 86 RKNIMHLVGNLSRHLKSGALDELALTTNGSQL-----ARFAGELADC---GVRRINVSLD 137 Query: 213 ANHPYEFSEEAI--------AAISRLANAGIILLSQSVLLKGIND 249 +P +F I AGI + +V LK ND Sbjct: 138 TLNPEKFRTITRWGDLSRVLEGIDAAQKAGIHVKINAVALKDFND 182 >gi|237669370|ref|ZP_04529352.1| ThiH/BioB family protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 468 Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y +RI+ L L + C C +C + L+ ++ + + +Q+ + Sbjct: 76 YGNRIVMFAPLYLSNYCVNGCVYCPYHHKNKHIRRKKLTQEEIKNEVIALQDMGHKRLAL 135 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174 TG DP+ + + + +KT+ IKH Sbjct: 136 ETGEDPVNNPIEYVLESIKTIYGIKH 161 >gi|182419049|ref|ZP_02950303.1| thiamine biosynthesis protein ThiH [Clostridium butyricum 5521] gi|182377004|gb|EDT74574.1| thiamine biosynthesis protein ThiH [Clostridium butyricum 5521] gi|256258836|gb|EEP52815.2| putative thiazole biosynthesis protein [Clostridium butyricum E4 str. BoNT E BL5262] Length = 472 Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 19/86 (22%), Positives = 38/86 (44%), Gaps = 4/86 (4%) Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y +RI+ L L + C C +C + L+ ++ + + +Q+ + Sbjct: 80 YGNRIVMFAPLYLSNYCVNGCVYCPYHHKNKHIRRKKLTQEEIKNEVIALQDMGHKRLAL 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174 TG DP+ + + + +KT+ IKH Sbjct: 140 ETGEDPVNNPIEYVLESIKTIYGIKH 165 >gi|15965617|ref|NP_385970.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti 1021] gi|307302736|ref|ZP_07582492.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti BL225C] gi|307318584|ref|ZP_07598018.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti AK83] gi|24211996|sp|Q92PB4|MOAA_RHIME RecName: Full=Molybdenum cofactor biosynthesis protein A gi|15074798|emb|CAC46443.1| Probable molybdenum cofactor biosynthesis protein [Sinorhizobium meliloti 1021] gi|306895924|gb|EFN26676.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti AK83] gi|306903100|gb|EFN33691.1| molybdenum cofactor biosynthesis protein A [Sinorhizobium meliloti BL225C] Length = 349 Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 29/172 (16%), Positives = 63/172 (36%), Gaps = 21/172 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + + ++ TGG+PL+ Sbjct: 34 VSVTDRCDFRCTYCMAEHMAFLPKKDLLTLEELQRLCSAFIA-KGVRKLRLTGGEPLVRK 92 Query: 159 HKR--LQKVLKTLR--YIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI--- 211 + ++++ K + + + + S++ + EL+ C V + Sbjct: 93 NIMFLIRELGKEIEAGRLDELTLTTNGSQL-----SKFAAELVDC-GVRRINVSLDTLDP 146 Query: 212 ----HANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 E + + I AG+ + +V LK ND + LMR Sbjct: 147 DKFRQITRWGELAR-VLEGIDAALAAGLKVKINAVALKDFND--AEIPELMR 195 >gi|325122551|gb|ADY82074.1| molybdopterin biosynthesis, protein A [Acinetobacter calcoaceticus PHEA-2] Length = 346 Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 32/160 (20%), Positives = 66/160 (41%), Gaps = 15/160 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C K +LS + +++ ++ I + TGG+PL+ Sbjct: 29 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCSFMVQQ-GIESIRITGGEPLM-- 85 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216 + + ++ L+ +K + + R + + + LK+AG + I++ + P Sbjct: 86 RQGIVYFVRDLQALKVLGLKRIS----MTTNGHYLAKYAKQLKDAGLDDLNISLDSLDPV 141 Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + E + I +AG+ VL+K NDD Sbjct: 142 QFKELTKKKLEPVLEGIQAAKDAGLPFKINCVLMKNKNDD 181 >gi|323464035|gb|ADX76188.1| radical SAM domain protein [Staphylococcus pseudintermedius ED99] Length = 379 Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 15/75 (20%), Positives = 31/75 (41%), Gaps = 4/75 (5%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + ++C + C C + ++ +L L I + + TGG+P + Sbjct: 33 VEFTTTNLCNMRCSHCAVGYTLQTKDPDILPMSLILQRLDEI---PTLRTISITGGEP-M 88 Query: 157 LSHKRLQKVLKTLRY 171 S K +++V+K L Sbjct: 89 FSKKSIREVVKPLLK 103 >gi|291566663|dbj|BAI88935.1| tRNA-i(6)A37 modification enzyme MiaB [Arthrospira platensis NIES-39] Length = 452 Score = 36.2 bits (83), Expect = 7.1, Method: Composition-based stats. Identities = 23/146 (15%), Positives = 51/146 (34%), Gaps = 21/146 (14%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQE--KSQIW----EVIF 149 + +++ C C +C + G+++ + A + + ++ + Sbjct: 148 TAWVNVIYGCNERCTYCVVPNVRGTEQSRTP--EAIRAEMEELARAGYKEVTLLGQNIDA 205 Query: 150 TGGD-PLILSHKR----LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG 204 G D P R L +L + I ++ +RF + P LI+ E Sbjct: 206 YGRDLPGSTPDGRHQHTLTDLLYYVHDIPGIERIRFATSHPRY----FTERLIRACAELP 261 Query: 205 KPVYIAIHANHP-YEFSEEAIAAISR 229 K + H + P + + A++R Sbjct: 262 K---VCEHFHIPFQSGDNDVLRAMAR 284 >gi|305663275|ref|YP_003859563.1| Radical SAM domain protein [Ignisphaera aggregans DSM 17230] gi|304377844|gb|ADM27683.1| Radical SAM domain protein [Ignisphaera aggregans DSM 17230] Length = 295 Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 36/183 (19%), Positives = 66/183 (36%), Gaps = 23/183 (12%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDPLI 156 L C +C +C+ +G + + ++ E L I + + + + + DP Sbjct: 23 LHPYTGCSHFCLYCYATSYIGRKPSVPKKNFIENLEKDLRQIVKGAVVE--LSSSSDPYP 80 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHP 216 +L+ KTL + R R+ I I I L P + I Sbjct: 81 PIEMQLELTRKTLEVLG-----RNGFRILITTKSDIVARDIDILLRY--PSAVMITITTL 133 Query: 217 YE-----FSEEA------IAAISRLANAGIILLSQS-VLLKGINDDPEILANLMRTFVEL 264 + A + A+ +L+ AGI + + ++ INDDPE L L+ ++ Sbjct: 134 DQGVAKVLEPGAPPPDRRMEAVRKLSRAGIPVGIRIDPVIPMINDDPEKLRELVNIARDV 193 Query: 265 RIK 267 Sbjct: 194 GAL 196 >gi|258422954|ref|ZP_05685853.1| conserved hypothetical protein [Staphylococcus aureus A9635] gi|257846741|gb|EEV70756.1| conserved hypothetical protein [Staphylococcus aureus A9635] Length = 383 Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ P E + + ++ L I ++C + C C + Sbjct: 12 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 58 Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 59 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 111 >gi|183221187|ref|YP_001839183.1| hypothetical protein LEPBI_I1801 [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189911278|ref|YP_001962833.1| thiamine biosynthesis enzyme [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167775954|gb|ABZ94255.1| Thiamine biosynthesis enzyme [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167779609|gb|ABZ97907.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 367 Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 17/114 (14%) Query: 102 LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKR 161 + C V C FC + +G+ KG VLS +D + Y + ++ GG + Sbjct: 72 TNYCNVECSFCSFMDEIGNGKGYVLSKEDILQKMDY-AMEEGADQMFLQGG---VYPELP 127 Query: 162 LQKVLKTLRYIK------HVQILR----FHSRVPIVDPQRINPELIQCLKEAGK 205 L +R +K H++ + P R E+++ LKEAG Sbjct: 128 FDYYLDVIRTVKAKYPKMHIRAFSPVEVINLETITGKPLR---EVLEILKEAGL 178 >gi|146329545|ref|YP_001210081.1| translation initiation factor IF-1 [Dichelobacter nodosus VCS1703A] gi|190359636|sp|A5EXE7|IF1_DICNV RecName: Full=Translation initiation factor IF-1 gi|146233015|gb|ABQ13993.1| translation initiation factor IF-1 [Dichelobacter nodosus VCS1703A] Length = 72 Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ +E G +I ISG + YI L G KV++ +++ K G Sbjct: 22 FRVELENGHQI----NAHISGRMRKHYIRILTGDKVKVEMTPYDLSK---GRIVFR 70 >gi|126451746|ref|YP_001066995.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei 1106a] gi|167816652|ref|ZP_02448332.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei 91] gi|167846563|ref|ZP_02472071.1| anaerobic ribonucleoside-triphosphate reductase activating protein [Burkholderia pseudomallei B7210] gi|242317715|ref|ZP_04816731.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia pseudomallei 1106b] gi|126225388|gb|ABN88928.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia pseudomallei 1106a] gi|242140954|gb|EES27356.1| ribonucleoside triphosphate reductase activase NrdG [Burkholderia pseudomallei 1106b] Length = 239 Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 13/88 (14%) Query: 93 YPDR-ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-IWEVIFT 150 YP + + + CP C +C Q + + + +A LA++ + I V+F+ Sbjct: 24 YPGQFAAVVFVQGCPWRCGYC---HNPHLQPRSQPAEIEWDALLAFLARRVGLIDAVVFS 80 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQIL 178 GG+P I L I V+ L Sbjct: 81 GGEPSI--DPALA------ASIDDVRRL 100 >gi|308802520|ref|XP_003078573.1| putative cullin (ISS) [Ostreococcus tauri] gi|116057026|emb|CAL51453.1| putative cullin (ISS) [Ostreococcus tauri] Length = 747 Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Query: 222 EAIAAISRLANAGIILLSQSVLLKGINDD--PEILANLMRTFVELRI 266 E A+ LA A + +L++ + INDD E+ L +++ Sbjct: 611 ELKRALQSLACAKVRILNKEPKSREINDDDSFEVNTALNERLFRIKV 657 >gi|15842680|ref|NP_337717.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis CDC1551] gi|254233733|ref|ZP_04927058.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis C] gi|13882999|gb|AAK47531.1| molybdopterin cofactor biosynthesis protein A [Mycobacterium tuberculosis CDC1551] gi|124599262|gb|EAY58366.1| molybdenum cofactor biosynthesis protein A moaA1 [Mycobacterium tuberculosis C] Length = 368 Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Query: 99 LKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 L ++ C + CR+C + +LS K+ A + + +V TGG+PLI Sbjct: 40 LSVIDQCNLRCRYCMPEEHYTWLPRQDLLSVKEISAIVDVFLS-VGVSKVRITGGEPLIR 98 Query: 158 SHKRLQKVLKTLRY 171 L ++++TL Sbjct: 99 PD--LPEIVRTLSA 110 >gi|258543608|ref|YP_003189041.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO 3283-01] gi|256634686|dbj|BAI00662.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO 3283-01] gi|256637742|dbj|BAI03711.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO 3283-03] gi|256640796|dbj|BAI06758.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO 3283-07] gi|256643851|dbj|BAI09806.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO 3283-22] gi|256646906|dbj|BAI12854.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO 3283-26] gi|256649959|dbj|BAI15900.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO 3283-32] gi|256652949|dbj|BAI18883.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO 3283-01-42C] gi|256656003|dbj|BAI21930.1| coproporphyrinogen III oxidase [Acetobacter pasteurianus IFO 3283-12] Length = 461 Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 5/78 (6%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLS-----SKDTEAALAYIQEKSQIWEVIFTGG 152 L + C CRFC V + L+ ++ +A + E+ + V F GG Sbjct: 53 LYFHVPFCDELCRFCGCNTSVMRHEDGRLAYGDLLREEMRRIVALVGEQRTVRHVQFGGG 112 Query: 153 DPLILSHKRLQKVLKTLR 170 P L L+++++++R Sbjct: 113 TPTTLPPHSLRQIMRSIR 130 >gi|224371859|ref|YP_002606025.1| putative oxygen-independent coproporphyrinogen III oxidase [Desulfobacterium autotrophicum HRM2] gi|223694578|gb|ACN17861.1| putative oxygen-independent coproporphyrinogen III oxidase [Desulfobacterium autotrophicum HRM2] Length = 289 Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 54/125 (43%), Gaps = 20/125 (16%) Query: 95 DRILLKLLHVCPVY-CRFC--FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 + ILL++ C C FC ++ E +K V+ +D E A + + + + Sbjct: 15 NSILLQVTVGCSHNKCTFCGAYKGERFKIKKDPVI-MEDIEFAARHCRRQ---NRLFICD 70 Query: 152 GDPLILSHKRLQKVLKTL-RYIKHVQILRFH----SRVPIVDPQRI-NPELIQCLKEAGK 205 GD LI+ +RL +L+ + + + ++ R ++ R+ + + ++ L+ G Sbjct: 71 GDALIIPQRRLVPILEQINQRLPWIE--RIGLYANTKSI-----RMKSDQELEQLRSLGV 123 Query: 206 PVYIA 210 + Sbjct: 124 KIAYM 128 >gi|170750295|ref|YP_001756555.1| molybdenum cofactor biosynthesis protein A [Methylobacterium radiotolerans JCM 2831] gi|170656817|gb|ACB25872.1| molybdenum cofactor biosynthesis protein A [Methylobacterium radiotolerans JCM 2831] Length = 350 Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 27/166 (16%), Positives = 62/166 (37%), Gaps = 25/166 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C M K +L+ ++ + + + ++ TGG+PL+ Sbjct: 36 ISVTDRCDLRCAYCMSEHMEFLPKRDLLTLEELDRLCGVFIAR-GVRKLRITGGEPLVRR 94 Query: 159 H-----KRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAI-- 211 +RL + L + ++ + + +++ R EL L V + Sbjct: 95 DIMHLFRRLSRHLDS-GALEELTLTTNGTQL-----TRYADELAS-LGVRRINVSLDTLD 147 Query: 212 --HANHPYEFS-----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + + + I+ AG+ + +V L+ +N D Sbjct: 148 PDKF---REITRRGDLKVVLDGIAAARAAGMKVKINAVALRDVNAD 190 >gi|15639091|ref|NP_218537.1| translation initiation factor IF-1 [Treponema pallidum subsp. pallidum str. Nichols] gi|189025331|ref|YP_001933103.1| translation initiation factor IF-1 [Treponema pallidum subsp. pallidum SS14] gi|6016311|sp|O83135|IF1_TREPA RecName: Full=Translation initiation factor IF-1 gi|3322358|gb|AAC65092.1| translation initiation factor 1 (infA) [Treponema pallidum subsp. pallidum str. Nichols] gi|189017906|gb|ACD70524.1| translation initiation factor 1 [Treponema pallidum subsp. pallidum SS14] gi|291059516|gb|ADD72251.1| translation initiation factor IF-1 [Treponema pallidum subsp. pallidum str. Chicago] Length = 72 Score = 36.2 bits (83), Expect = 7.2, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 7/56 (12%) Query: 283 FRLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCIT 338 FR+ ++ G +I+ +SG + YI +PG KV + +++ + G Sbjct: 22 FRVQLQNGHEIL----AYLSGRMRKHYIRIVPGDSVKVALSPYDLSR---GRIMFR 70 >gi|254511318|ref|ZP_05123385.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacteraceae bacterium KLH11] gi|221535029|gb|EEE38017.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacteraceae bacterium KLH11] Length = 439 Score = 36.2 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 11/98 (11%) Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKD--TEAALAYIQEKSQ-IWEVI 148 L + C +C FC R V ++ E + I Q + Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPADRIIREAQDLVERGVREITLLGQNVNAYH 209 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 G D L ++ L + ++ +RF + P Sbjct: 210 GAGPDG----DMTLAALIWELNKVDGLERIRFTTSHPN 243 >gi|109947136|ref|YP_664364.1| hypothetical protein Hac_0545 [Helicobacter acinonychis str. Sheeba] gi|109714357|emb|CAJ99365.1| conserved hypothetical protein [Helicobacter acinonychis str. Sheeba] Length = 418 Score = 36.2 bits (83), Expect = 7.3, Method: Composition-based stats. Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 10/94 (10%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAY--IQEKSQIWEVIFTG 151 R +K+ C C +C + S +G S ++ L + + EV+ TG Sbjct: 133 KTRAFIKIQEGCDFDCNYCI----IPSVRGRARSFEE-RKILEQVGLLCAKGVQEVVLTG 187 Query: 152 GDPLILSHKR---LQKVLKTLRYIKHVQILRFHS 182 + R + +++K L I ++ +R S Sbjct: 188 TNVGSYGKDRESNIARLIKKLSQIVGLKRIRIGS 221 >gi|307353972|ref|YP_003895023.1| Radical SAM domain-containing protein [Methanoplanus petrolearius DSM 11571] gi|307157205|gb|ADN36585.1| Radical SAM domain protein [Methanoplanus petrolearius DSM 11571] Length = 362 Score = 36.2 bits (83), Expect = 7.4, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 51/119 (42%), Gaps = 15/119 (12%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 + L+++ +C C CF +G ++ +D + + ++ ++ V TGG+P Sbjct: 28 KALIRITDICNARCVHCFTSA---DNQGETMTLEDFQDFVVPRLKQCRVSRVTLTGGEPF 84 Query: 156 ILSHKRLQKVLKTLRYIKHVQI-LRFHSRVPIVDPQRINPELIQCLK-EAGKPVYIAIH 212 + + ++ ++ + + I + + + I + IQ L E + +++H Sbjct: 85 LHPN-----IIDFVKLLSNADISVGICTNATV-----ITTDQIQALSHERNVHINVSLH 133 >gi|157822765|ref|NP_001100351.1| molybdenum cofactor biosynthesis protein 1 [Rattus norvegicus] gi|149069512|gb|EDM18953.1| molybdenum cofactor synthesis 1 (predicted), isoform CRA_b [Rattus norvegicus] Length = 480 Score = 36.2 bits (83), Expect = 7.4, Method: Composition-based stats. Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 7/92 (7%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCFRREMVG-SQKGTVLSSKDTEAALAYIQEKSQIWE 146 G H Y + + L C + CR+C E V + K +L++++ LA + K + + Sbjct: 66 GRQHSY---LRISLTEKCNLRCRYCMPEEGVSLTPKADLLTTEEILT-LARLFVKEGVDK 121 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + TGG+PLI ++ L ++ ++ + Sbjct: 122 IRLTGGEPLIRPDVV--DIVARLHQLEGLRTI 151 >gi|189461431|ref|ZP_03010216.1| hypothetical protein BACCOP_02086 [Bacteroides coprocola DSM 17136] gi|189431960|gb|EDV00945.1| hypothetical protein BACCOP_02086 [Bacteroides coprocola DSM 17136] Length = 472 Score = 36.2 bits (83), Expect = 7.4, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 5/117 (4%) Query: 63 QKEELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREM 117 E +L E ++ + + ++ + I R Y +RI+ L L + C C +C Sbjct: 49 SHREAAVLLECDDNDLLEEIYALARKIKQRFYGNRIVMFAPLYLSNYCVNSCVYCPYHIK 108 Query: 118 VGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 S L+ + + +Q+ I G DPL + + + +KT+ I+H Sbjct: 109 NKSIARKKLTQDEIRQEVIALQDMGHKRLAIEAGEDPLHNPIEYILESIKTIYSIQH 165 >gi|84502860|ref|ZP_01000973.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola batsensis HTCC2597] gi|84388843|gb|EAQ01713.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Oceanicola batsensis HTCC2597] Length = 440 Score = 36.2 bits (83), Expect = 7.4, Method: Composition-based stats. Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 14/117 (11%) Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKD--TEAALAYIQEKSQ-IWEVI 148 L + C +C FC R V VL+ E + I Q + Sbjct: 149 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRPVARVLTEARDLVERGVREITLLGQNVNAYH 208 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 G D L +++ L I+ ++ +RF + P ++ +LI E GK Sbjct: 209 GEGPDG---RDWSLAGLIRELAEIEGLERIRFTTSHPND----MSDDLIAAHGEVGK 258 >gi|238752394|ref|ZP_04613872.1| Coproporphyrinogen III oxidase [Yersinia rohdei ATCC 43380] gi|238709435|gb|EEQ01675.1| Coproporphyrinogen III oxidase [Yersinia rohdei ATCC 43380] Length = 414 Score = 36.2 bits (83), Expect = 7.5, Method: Composition-based stats. Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 7/82 (8%) Query: 96 RILLKLLHVCPVYCRFC------FRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R+L + C +C FC + E +L + EAA +Q I + F Sbjct: 31 RLLYLHIPFCATHCTFCGFYQNPLQPESTARYTDYLLQELNMEAASPLLQGGP-IHAIYF 89 Query: 150 TGGDPLILSHKRLQKVLKTLRY 171 GG P LS ++L +++ LR Sbjct: 90 GGGTPSALSAEQLHRIISQLRQ 111 >gi|254689196|ref|ZP_05152450.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 6 str. 870] gi|260754697|ref|ZP_05867045.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 6 str. 870] gi|260674805|gb|EEX61626.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 6 str. 870] Length = 344 Score = 36.2 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 5/78 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLRYIKHVQ 176 K + ++ L H++ Sbjct: 86 RKNIMHLIGNLSR--HLK 101 >gi|268318084|ref|YP_003291803.1| Radical SAM domain-containing protein [Rhodothermus marinus DSM 4252] gi|262335618|gb|ACY49415.1| Radical SAM domain protein [Rhodothermus marinus DSM 4252] Length = 360 Score = 36.2 bits (83), Expect = 7.6, Method: Composition-based stats. Identities = 25/109 (22%), Positives = 40/109 (36%), Gaps = 12/109 (11%) Query: 72 EEREDPIGDNNHSPLKGIVHRYPDRILLKL-LHVCPVYCRFCFRREMVGSQKGTVLSSKD 130 DPI K + H P +L C + CRFC ++ S++ L+ + Sbjct: 57 GFCIDPIEK------KPLNHFLPGTAVLSFGTAGCNLGCRFCQNWDISKSREMDTLADEA 110 Query: 131 TEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR 179 +A + E V FT DP+I L + H + +R Sbjct: 111 APETIARVAEALGCRSVAFTYNDPVIFHEYALD-----VARACHERGIR 154 >gi|313900907|ref|ZP_07834397.1| iron-only hydrogenase maturation rSAM protein HydG [Clostridium sp. HGF2] gi|312954327|gb|EFR36005.1| iron-only hydrogenase maturation rSAM protein HydG [Clostridium sp. HGF2] Length = 472 Score = 36.2 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 27/166 (16%) Query: 90 VHRYPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW 145 Y +RI+ L L + C C +C + L+ ++ + +Q+ Sbjct: 77 QKLYGNRIVMFAPLYLSNYCVNGCVYCPYHYKNKHIRRKKLTQEEIRQEVIALQDMGHKR 136 Query: 146 EVIFTGGDPLILSHKRLQKVLKTLRYIKH----VQILRFHSRVPIVDPQRINPELIQCLK 201 + TG DP+ + + + +KT+ IKH ++ + V+ + + LK Sbjct: 137 LALETGEDPVHSPIEYVLESIKTIYGIKHKNGAIRRV-------NVNIAATTVDNYRKLK 189 Query: 202 EAG------------KPVYIAIHANHPYEFSEEAIAAISRLANAGI 235 EAG K Y +H N P A+ R GI Sbjct: 190 EAGIGTYILFQETYNKQSYEQLHPNGPKSNYAYHTEAMDRAMEGGI 235 >gi|282904508|ref|ZP_06312393.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus C160] gi|282919711|ref|ZP_06327443.1| hypothetical protein SASG_02328 [Staphylococcus aureus subsp. aureus C427] gi|297590071|ref|ZP_06948711.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus MN8] gi|282316349|gb|EFB46726.1| hypothetical protein SASG_02328 [Staphylococcus aureus subsp. aureus C427] gi|282595064|gb|EFC00031.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus C160] gi|297577199|gb|EFH95913.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus MN8] gi|315193403|gb|EFU23800.1| hypothetical protein CGSSa00_04716 [Staphylococcus aureus subsp. aureus CGS00] Length = 381 Score = 36.2 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ P E + + ++ L I ++C + C C + Sbjct: 10 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56 Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 57 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 109 >gi|90423576|ref|YP_531946.1| molybdenum cofactor biosynthesis protein A [Rhodopseudomonas palustris BisB18] gi|90105590|gb|ABD87627.1| GTP cyclohydrolase subunit MoaA [Rhodopseudomonas palustris BisB18] Length = 344 Score = 36.2 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 29/171 (16%), Positives = 64/171 (37%), Gaps = 35/171 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + C +C +M + +L+ ++ + + + ++ TGG+PL+ Sbjct: 29 VSITDRCDLRCVYCMSEDMTFLPRADLLTLEELDRLCSAFIA-KGVKKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLRYIKH---VQILRF---HSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 + + ++++L H + L S++ R EL C V + Sbjct: 86 RRNMMSLVRSLSRHLHTGALDELTLTTNGSQL-----ARYAAELADC-GVRRINVSLDT- 138 Query: 213 ANHPYEFSEEAIAAISRL-------------ANAGIILLSQSVLLKGINDD 250 + AI+R +AG+ + +V LK +N+D Sbjct: 139 ------LDPDKFRAITRWGDLGKVLAGIDAARDAGLAVKINAVALKDVNED 183 >gi|258515371|ref|YP_003191593.1| Radical SAM domain-containing protein [Desulfotomaculum acetoxidans DSM 771] gi|257779076|gb|ACV62970.1| Radical SAM domain protein [Desulfotomaculum acetoxidans DSM 771] Length = 291 Score = 36.2 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 36/85 (42%), Gaps = 6/85 (7%) Query: 97 ILLKLLHVC-PVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ-EKSQIWEVIFTGGDP 154 +++++ C C FC M ++ + S ++ +A + Y + + V GD Sbjct: 17 LIIQVTIGCKHNACSFCG---MYREKRFRIKSWEEIKADIDYCKINYLHVRRVFLADGDA 73 Query: 155 LILSHKRLQKVLKTLRYI-KHVQIL 178 L + + K+L L + ++ + Sbjct: 74 LAMESAEIIKILDYLYEVFPGLERI 98 >gi|240104125|ref|YP_002960434.1| molybdenum cofactor biosynthesis protein A [Thermococcus gammatolerans EJ3] gi|239911679|gb|ACS34570.1| Molybdenum cofactor biosynthesis protein A (moaA) [Thermococcus gammatolerans EJ3] Length = 308 Score = 36.2 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 43/170 (25%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFR--REMVGSQKGTVLSSKDTEAA 134 P+ D P+ + + L C C FC R + + + ++ ++ E Sbjct: 2 PLYDRFGRPVTNLR--------ISLTQECNFRCFFCHREGQRFLAKNE---MTPEEIERI 50 Query: 135 LAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRF---HSRVPIVDPQ 190 + I + I +V TGG+P + +L+ +R I +V L SR+ Sbjct: 51 VR-IASRLGIRKVKLTGGEPTVRED-----ILEIVRRIKPYVIDLSMTTNGSRL------ 98 Query: 191 RINPELIQCLKEAGKP-VYIAIHANHPYEFSEEAIAAISRLANAGIILLS 239 EL + L +AG V +++H E I G+ L+ Sbjct: 99 ---KELAKPLAKAGLNRVNVSLH-----SLKPEVYKKI-----TGVDALN 135 >gi|167950322|ref|ZP_02537396.1| hypothetical protein Epers_29333 [Endoriftia persephone 'Hot96_1+Hot96_2'] Length = 344 Score = 36.2 bits (83), Expect = 7.7, Method: Composition-based stats. Identities = 24/113 (21%), Positives = 35/113 (30%), Gaps = 24/113 (21%) Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKG 123 E L + DP G+ + L L CP CR C F Sbjct: 181 RERLALLDGLPDPGGETRFAKLG-----------LIPAMGCPQTCRHCMFIWR------- 222 Query: 124 TVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQ 176 + E Y V+FTGGD + L +R ++H++ Sbjct: 223 -PPVKQQLEPQSLYQLVDGLTESVLFTGGDL----TRHLDHFYAAIRSMRHIR 270 >gi|228949221|ref|ZP_04111488.1| Radical SAM domain protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] gi|228810447|gb|EEM56801.1| Radical SAM domain protein [Bacillus thuringiensis serovar monterrey BGSC 4AJ1] Length = 468 Score = 36.2 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 15/119 (12%) Query: 57 ARQFIPQKEELN-----ILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRF 111 R+ I EEL ++ +D D + P Y + L + H C + C + Sbjct: 62 LRETIADIEELKRDGKLFTEDDYKDLSIDLINRPT------YVKALCLNVAHTCNLSCEY 115 Query: 112 CFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPLILSHKRLQKVLK 167 CF + + ++S + + A+ ++ E S +V F GG+PL+ K +++++ Sbjct: 116 CFASQGKYNGNRAIMSYEVGKRAIDFLLENSGNHRNLDVDFFGGEPLMA-WKTVKQIVA 173 >gi|218884694|ref|YP_002429076.1| Predicted Fe-S oxidoreductase [Desulfurococcus kamchatkensis 1221n] gi|218766310|gb|ACL11709.1| Predicted Fe-S oxidoreductase [Desulfurococcus kamchatkensis 1221n] Length = 572 Score = 36.2 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 44/224 (19%), Positives = 82/224 (36%), Gaps = 37/224 (16%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSK--DTEAALAYIQEKSQIWEVIFTGGDP 154 + + + + C + C +CF G V + + I+++ + TGG+P Sbjct: 125 VNMVVTNRCNLSCWYCF---FYSEASGYVYEPRLDQIREMVRSIKKQGVTVAIQLTGGEP 181 Query: 155 LILSHKRLQKVLKTL--RYIKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPVY 208 L+ L ++K L ++H+Q+ +RF + I DP + E + L+ +G Sbjct: 182 LLRED--LVDIVKLLKEEGVRHIQLNTNGIRFA-ELYIEDPVKAV-EYARELRSSGVNTV 237 Query: 209 I-----AIHA----NHPYEFSEEAIAAISRLANAGI--ILLSQSVLLKGINDD-----PE 252 NH E + AG+ +L +V+ KG+N Sbjct: 238 YLSFDGVTPVTNWKNHW-----EVPYILETFRKAGMTSTVLVPTVI-KGVNTHELGAIVR 291 Query: 253 ILANLMRTFVELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVAS 296 A M + +P L +R+TI E K++ Sbjct: 292 FAAKHMDVIRAVNFQPVSLTGYMKKHEREKYRITIPEVVKLIEE 335 >gi|83590961|ref|YP_430970.1| GTP cyclohydrolase subunit MoaA [Moorella thermoacetica ATCC 39073] gi|123725642|sp|Q2RGL2|MOAA_MOOTA RecName: Full=Molybdenum cofactor biosynthesis protein A gi|83573875|gb|ABC20427.1| GTP cyclohydrolase subunit MoaA [Moorella thermoacetica ATCC 39073] Length = 323 Score = 36.2 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 34/162 (20%), Positives = 62/162 (38%), Gaps = 18/162 (11%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + CR+C V + + + A LA + + I + TGG+PL+ Sbjct: 14 IAITDRCNLRCRYCMPATGVPLKGHEDILRLEEIATLARVAAGTGISRIRLTGGEPLV-- 71 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIHA---N 214 K + +++ L I ++ + + L LKEAG K V I++ + Sbjct: 72 RKNVVTLVRELAAIPGLEEISLTTNGI------FLGALAFSLKEAGLKRVNISLDTLKKD 125 Query: 215 HPYEFS-----EEAIAAISRLANAGI-ILLSQSVLLKGINDD 250 + I AG+ + V+ +G NDD Sbjct: 126 RYRYITRRGNITSVWQGIRAALAAGLTPVKLNVVITRGFNDD 167 >gi|62289889|ref|YP_221682.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 1 str. 9-941] gi|82699819|ref|YP_414393.1| molybdenum cofactor biosynthesis protein A [Brucella melitensis biovar Abortus 2308] gi|189024134|ref|YP_001934902.1| molybdenum cofactor biosynthesis protein A [Brucella abortus S19] gi|237815389|ref|ZP_04594387.1| molybdenum cofactor biosynthesis protein A [Brucella abortus str. 2308 A] gi|254697332|ref|ZP_05159160.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 2 str. 86/8/59] gi|254730230|ref|ZP_05188808.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 4 str. 292] gi|256257446|ref|ZP_05462982.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 9 str. C68] gi|260545361|ref|ZP_05821102.1| molybdenum cofactor biosynthesis protein A [Brucella abortus NCTC 8038] gi|260757921|ref|ZP_05870269.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 4 str. 292] gi|260761743|ref|ZP_05874086.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 2 str. 86/8/59] gi|260883723|ref|ZP_05895337.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 9 str. C68] gi|297248294|ref|ZP_06932012.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 5 str. B3196] gi|75496872|sp|Q57DG3|MOAA_BRUAB RecName: Full=Molybdenum cofactor biosynthesis protein A gi|123740914|sp|Q2YNT7|MOAA_BRUA2 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|226704812|sp|B2S5I1|MOAA_BRUA1 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|62196021|gb|AAX74321.1| MoaA, molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 1 str. 9-941] gi|82615920|emb|CAJ10929.1| MoaA/nifB/pqqE family:Elongator protein 3/MiaB/NifB:Radical SAM [Brucella melitensis biovar Abortus 2308] gi|189019706|gb|ACD72428.1| MoaA/nifB/pqqE family protein [Brucella abortus S19] gi|237790226|gb|EEP64436.1| molybdenum cofactor biosynthesis protein A [Brucella abortus str. 2308 A] gi|260096768|gb|EEW80643.1| molybdenum cofactor biosynthesis protein A [Brucella abortus NCTC 8038] gi|260668239|gb|EEX55179.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 4 str. 292] gi|260672175|gb|EEX58996.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 2 str. 86/8/59] gi|260873251|gb|EEX80320.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 9 str. C68] gi|297175463|gb|EFH34810.1| molybdenum cofactor biosynthesis protein A [Brucella abortus bv. 5 str. B3196] Length = 344 Score = 36.2 bits (83), Expect = 7.8, Method: Composition-based stats. Identities = 15/78 (19%), Positives = 34/78 (43%), Gaps = 5/78 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + E + ++ TGG+PL+ Sbjct: 29 VSVTDRCDFRCTYCMAEHMTFLPKKDLLTLEELDRLCSVFIE-KGVRKLRLTGGEPLV-- 85 Query: 159 HKRLQKVLKTLRYIKHVQ 176 K + ++ L H++ Sbjct: 86 RKNIMHLIGNLSR--HLK 101 >gi|300871623|ref|YP_003786496.1| thiamine biosynthesis protein [Brachyspira pilosicoli 95/1000] gi|300689324|gb|ADK31995.1| thiamine biosynthesis protein [Brachyspira pilosicoli 95/1000] Length = 474 Score = 36.2 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 31/76 (40%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L L + C C +C L+ + A + +Q+ + TG DP S Sbjct: 94 LYLSNYCINGCVYCPYHAKNKHIARKQLTQDEIRAEVIALQDMGHKRLALETGEDPDYAS 153 Query: 159 HKRLQKVLKTLRYIKH 174 + L + +KT+ IKH Sbjct: 154 MEYLLESIKTIYSIKH 169 >gi|291296099|ref|YP_003507497.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus ruber DSM 1279] gi|290471058|gb|ADD28477.1| oxygen-independent coproporphyrinogen III oxidase [Meiothermus ruber DSM 1279] Length = 384 Score = 36.2 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 22/123 (17%), Positives = 43/123 (34%), Gaps = 15/123 (12%) Query: 87 KGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQEKSQ-I 144 + H Y + CP C +C F + + A ++ + Sbjct: 4 PALQHLY------LHVPFCPTICPYCDFHVVRRYGDVVEAYLKRLAQEARGLFEQHPGPL 57 Query: 145 WEVIFTGGDPLILSHKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 + GG P L L+ + + L + I+ ++ +P +NPE ++ L+E Sbjct: 58 TTLYLGGGTPSFLRSHELEALFRALPWNIEAAEV------TLEANPGTLNPERLRLLREL 111 Query: 204 GKP 206 G Sbjct: 112 GVN 114 >gi|225619004|ref|YP_002720230.1| thiamine biosynthesis protein ThiH [Brachyspira hyodysenteriae WA1] gi|225213823|gb|ACN82557.1| thiamine biosynthesis protein [Brachyspira hyodysenteriae WA1] Length = 474 Score = 36.2 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 19/76 (25%), Positives = 31/76 (40%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L L + C C +C L+ + A + +Q+ + TG DP S Sbjct: 94 LYLSNYCINGCVYCPYHAKNKHIARKQLTQDEIRAEVIALQDMGHKRLALETGEDPDYAS 153 Query: 159 HKRLQKVLKTLRYIKH 174 + L + +KT+ IKH Sbjct: 154 MEYLLESIKTIYSIKH 169 >gi|85705226|ref|ZP_01036325.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. 217] gi|85670099|gb|EAQ24961.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Roseovarius sp. 217] Length = 446 Score = 36.2 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 19/110 (17%), Positives = 39/110 (35%), Gaps = 13/110 (11%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153 L + C +C FC GS+ ++ E A ++ + E+ G + Sbjct: 156 TAFLTVQEGCDKFCAFCVVPYTRGSEVSRPVARV-LEEARDLVER--GVREITLLGQNVN 212 Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 L +++ L I ++ +RF + P ++ +LI Sbjct: 213 AYHGAGEGGDWGLARLIWALNDIDGLERIRFTTSHPND----MDDDLIAA 258 >gi|121534167|ref|ZP_01665992.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1] gi|121307270|gb|EAX48187.1| Radical SAM domain protein [Thermosinus carboxydivorans Nor1] Length = 413 Score = 36.2 bits (83), Expect = 7.9, Method: Composition-based stats. Identities = 30/178 (16%), Positives = 65/178 (36%), Gaps = 27/178 (15%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L+L C C C+ + V + ++ + F GG+PL+ Sbjct: 98 VWLELTASCNNRCLHCYATSGPCAGYDAVPHDRWLSLITE--ARQAGATAIQFIGGEPLL 155 Query: 157 LSHKRLQKVLKTLRY--IKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN 214 R Q++ + R + ++I + I+ + I+ +K+ + IA Sbjct: 156 YP--RWQELAQRARQDGYEFIEIFTNAT--------LIDDDCIKFVKD--NQINIATTIY 203 Query: 215 HPY-----EFS------EEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTF 261 + + +AA+ +L AG+ L S+++K ++ E + L Sbjct: 204 AANAAVHDRVTLNPGSFNQTMAAVRKLLAAGVPLRIASIIMKANEEEAENIMKLCEEL 261 >gi|329904141|ref|ZP_08273687.1| Transcriptional regulator [Oxalobacteraceae bacterium IMCC9480] gi|327548124|gb|EGF32841.1| Transcriptional regulator [Oxalobacteraceae bacterium IMCC9480] Length = 404 Score = 36.2 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 21/93 (22%), Positives = 45/93 (48%), Gaps = 11/93 (11%) Query: 95 DRILLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE----- 146 ++++LK++ C + C +C+ R + + V+S + I E + + Sbjct: 18 NQVILKIVQRCNLDCTYCYVYNRGDDSWKSRPPVISERVLLRLAERINEHCRRHQLSSFT 77 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRY-IK--HVQ 176 + GG+PL++ +++Q +L LR I HV+ Sbjct: 78 IELHGGEPLLIGKRKMQALLTLLRSRIDAAHVR 110 >gi|189461331|ref|ZP_03010116.1| hypothetical protein BACCOP_01981 [Bacteroides coprocola DSM 17136] gi|189431860|gb|EDV00845.1| hypothetical protein BACCOP_01981 [Bacteroides coprocola DSM 17136] Length = 432 Score = 36.2 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 14/113 (12%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ------IWEVIFT 150 LK+ C C +C + G K ++ + + + E+ + Sbjct: 138 AYLKISEGCDRKCSYCAIPIITG--KHVSRPMEEILDEVRLLVSEGVKEFQVIAQELTYY 195 Query: 151 GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 G D + + L ++++ + I V+ +R H P EL + ++E Sbjct: 196 GVD--LYKKQMLPELIERMAEIPGVKWIRLH----YAYPAHFPKELFRVMREH 242 >gi|159043568|ref|YP_001532362.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Dinoroseobacter shibae DFL 12] gi|229890517|sp|A8LSE7|MIAB_DINSH RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|157911328|gb|ABV92761.1| RNA modification enzyme [Dinoroseobacter shibae DFL 12] Length = 437 Score = 36.2 bits (83), Expect = 8.0, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 5/93 (5%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153 L + C +C FC G++ + +++ A ++ + E+ G + Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPAARVLTEARDLVER--GVREITLLGQNVN 206 Query: 154 PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 + L ++ L I ++ +RF + P Sbjct: 207 AYHGHARGLAGLIWDLAEIDGLERIRFTTSHPN 239 >gi|168187980|ref|ZP_02622615.1| heme biosynthesis [Clostridium botulinum C str. Eklund] gi|169294199|gb|EDS76332.1| heme biosynthesis [Clostridium botulinum C str. Eklund] Length = 456 Score = 36.2 bits (83), Expect = 8.1, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF E V+S + + A+ ++ S EV GG+PL Sbjct: 99 LNVTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVVAHSGPRKNIEVDLFGGEPL 158 >gi|298695215|gb|ADI98437.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus ED133] Length = 381 Score = 36.2 bits (83), Expect = 8.1, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 16/114 (14%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P E + + ++ L I ++C + C C + Sbjct: 10 IQNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56 Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 57 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 109 >gi|237732895|ref|ZP_04563376.1| predicted protein [Mollicutes bacterium D7] gi|229384048|gb|EEO34139.1| predicted protein [Coprobacillus sp. D7] Length = 277 Score = 36.2 bits (83), Expect = 8.1, Method: Composition-based stats. Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 3/62 (4%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 L CP C FC R+ +G K E+ + E + TGG+P + + Sbjct: 52 LITTQECPYNCPFCLERQNP--MEGNQDFKKQIESLKGVLSEHPNAR-LTITGGEPGLYT 108 Query: 159 HK 160 Sbjct: 109 DH 110 >gi|282880323|ref|ZP_06289037.1| putative oxygen-independent coproporphyrinogen III oxidase [Prevotella timonensis CRIS 5C-B1] gi|281305825|gb|EFA97871.1| putative oxygen-independent coproporphyrinogen III oxidase [Prevotella timonensis CRIS 5C-B1] Length = 386 Score = 36.2 bits (83), Expect = 8.2, Method: Composition-based stats. Identities = 30/166 (18%), Positives = 60/166 (36%), Gaps = 32/166 (19%) Query: 98 LLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAAL-------AYI--------QEKS 142 L + C C +C S L K +A Y+ ++ Sbjct: 4 LYLHIPFCASRCIYCG----FYSTTNLSLRQKYVDALCQELRLRRDYLSDIETNLSEDTH 59 Query: 143 QIWEVIFTGGDPLILSHKRLQKVLKTLRYI---KHVQILRFHSRV-PIVDPQRINPELIQ 198 I + GG P L+ +LQ++ + + I ++ +R V +P I+P ++ Sbjct: 60 LIRTIYIGGGTPSQLTPAQLQQIFEVIGSIYFNGNLSTMRSQCEVTLECNPDDISPSFVE 119 Query: 199 CLKEA-------GKPVYIAIHAN--HPYEFSEEAIAAISRLANAGI 235 ++++ G + N H +E+ A++RL G+ Sbjct: 120 FIEQSPINRISMGVQTFSNAQLNFLHRRHQAEDVATAVNRLREIGV 165 >gi|327312397|ref|YP_004327834.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola F0289] gi|326946389|gb|AEA22274.1| putative coproporphyrinogen dehydrogenase [Prevotella denticola F0289] Length = 434 Score = 36.2 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 36/186 (19%), Positives = 67/186 (36%), Gaps = 39/186 (20%) Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKD--TEAALAYIQ-----------EKSQ 143 L + C C +C F + +G S ++ +A ++ E ++ Sbjct: 4 LYIHVPFCASRCIYCGFYSTVPSGGEGKGKSVEERYVDAMCHEMELRTDEEAASGGETAE 63 Query: 144 IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILR-FHS-------RVPI-----VDPQ 190 + + GG P LS + L ++ T+ + H+ R + PI +P Sbjct: 64 LTSIYLGGGTPSQLSFQSLHRLFHTIETVYHLPFRRDMGTDRRQGCAAAPIEVTMECNPD 123 Query: 191 RINPELIQCLKEAGKPVYIA---------IHANHPYEFSEEAIAAISRLANAGIILLSQS 241 + E + L+ + H + EA++A+ RL AGI + S Sbjct: 124 DVTAEFARRLRSLPVNRISMGMQTFSDERLRFLHRRHTAAEAVSAVGRLREAGI--GNIS 181 Query: 242 V-LLKG 246 V L+ G Sbjct: 182 VDLMFG 187 >gi|212710494|ref|ZP_03318622.1| hypothetical protein PROVALCAL_01556 [Providencia alcalifaciens DSM 30120] gi|212686914|gb|EEB46442.1| hypothetical protein PROVALCAL_01556 [Providencia alcalifaciens DSM 30120] Length = 317 Score = 36.2 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 11/61 (18%) Query: 223 AIAAISRLANAGIILLSQSVLLKGINDDPEILA-------NLMRT--FVELRIKPYYLHH 273 + RL G ++ + L++G ND + + L + + I PY H Sbjct: 215 VRRNLERLMELGANVVMRMPLVRGYNDSFDAITGAIEYAMELSKRGNLNRIDILPY--HQ 272 Query: 274 P 274 Sbjct: 273 L 273 >gi|167745954|ref|ZP_02418081.1| hypothetical protein ANACAC_00649 [Anaerostipes caccae DSM 14662] gi|167654469|gb|EDR98598.1| hypothetical protein ANACAC_00649 [Anaerostipes caccae DSM 14662] Length = 472 Score = 36.2 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 4/86 (4%) Query: 93 YPDRIL----LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y +RI+ L L + C C +C + LS ++ + + +Q+ + Sbjct: 80 YGNRIVMFAPLYLANYCVNGCVYCPYHYKNKHIRRKKLSQEEIKKEVIALQDMGHKRLAL 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174 TG DP+ + + + + +KT+ IKH Sbjct: 140 ETGEDPVNIPIEYVLESIKTIYGIKH 165 >gi|16124274|ref|NP_418838.1| molybdenum cofactor biosynthesis protein A [Caulobacter crescentus CB15] gi|221232957|ref|YP_002515393.1| molybdenum cofactor biosynthesis protein A [Caulobacter crescentus NA1000] gi|24212006|sp|Q9AC48|MOAA_CAUCR RecName: Full=Molybdenum cofactor biosynthesis protein A gi|13421106|gb|AAK22006.1| molybdenum cofactor biosynthesis protein A [Caulobacter crescentus CB15] gi|220962129|gb|ACL93485.1| molybdenum cofactor biosynthesis protein A [Caulobacter crescentus NA1000] Length = 349 Score = 36.2 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 33/180 (18%), Positives = 59/180 (32%), Gaps = 37/180 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI-- 156 + + C + C +C M K VL+ ++ + + + ++ TGG+PL+ Sbjct: 36 VSVTDRCDLRCVYCMAEHMTFLPKAEVLTLEELDRLASTFVG-LGVRKLRLTGGEPLVRK 94 Query: 157 ------------LSHKRLQKVL-----KTLRYIKHVQILRFHSRVPIVDPQRINPELIQC 199 LS L ++ L + R R V + P L + Sbjct: 95 GFIGLVARLSRHLSSGALDELTLTTNGSQLERYAS-DLARHGVRRINVSLDTLKPALFRA 153 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMR 259 L G IA I AG+ + +V LK D+ + L++ Sbjct: 154 LTRGGD--------------VTRVIAGIDAAQAAGMTVKINAVALKH--DNAGEIPALIQ 197 >gi|75759721|ref|ZP_00739802.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228904932|ref|ZP_04068985.1| Radical SAM domain protein [Bacillus thuringiensis IBL 4222] gi|74492798|gb|EAO55933.1| Arylsulfatase regulator (Fe-S oxidoreductase) [Bacillus thuringiensis serovar israelensis ATCC 35646] gi|228854707|gb|EEM99312.1| Radical SAM domain protein [Bacillus thuringiensis IBL 4222] Length = 468 Score = 36.2 bits (83), Expect = 8.3, Method: Composition-based stats. Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Query: 93 YPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIF 149 Y + L + H C + C +CF + + ++S + + A+ ++ E S +V F Sbjct: 97 YVKALCLNVAHTCNLSCEYCFASQGKYNGNRAIMSFEVGKRAIDFLLENSGNHRNLDVDF 156 Query: 150 TGGDPLILSHKRLQKVLK 167 GG+PL+ K +++++ Sbjct: 157 FGGEPLMA-WKTVKQIVA 173 >gi|321313919|ref|YP_004206206.1| galactarate dehydratase [Bacillus subtilis BSn5] gi|320020193|gb|ADV95179.1| galactarate dehydratase [Bacillus subtilis BSn5] Length = 510 Score = 36.2 bits (83), Expect = 8.4, Method: Composition-based stats. Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 10/89 (11%) Query: 151 GGDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYI 209 G D L L R +++++ + +++R +SR + P +L+ L+ G + Sbjct: 226 GDDILSLQDHRGFAAMIQSILEMAEERLIRLNSRTRVSCP---VSDLVIGLQCGGSDAFS 282 Query: 210 AIHANHPYEFSEEAIAAISRLANAGIILL 238 + AN A L AG +L Sbjct: 283 GVTAN------PAVGYAADLLVRAGATVL 305 >gi|282917222|ref|ZP_06324977.1| hypothetical protein SATG_01796 [Staphylococcus aureus subsp. aureus D139] gi|283771026|ref|ZP_06343917.1| radical SAM superfamily domain-containing protein [Staphylococcus aureus subsp. aureus H19] gi|282318849|gb|EFB49204.1| hypothetical protein SATG_01796 [Staphylococcus aureus subsp. aureus D139] gi|283459620|gb|EFC06711.1| radical SAM superfamily domain-containing protein [Staphylococcus aureus subsp. aureus H19] Length = 381 Score = 36.2 bits (83), Expect = 8.4, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ P E + + ++ L I ++C + C C + Sbjct: 10 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56 Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 57 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHNRGI 109 >gi|221632343|ref|YP_002521564.1| radical SAM enzyme, Cfr family [Thermomicrobium roseum DSM 5159] gi|221156232|gb|ACM05359.1| radical SAM enzyme, Cfr family [Thermomicrobium roseum DSM 5159] Length = 379 Score = 36.2 bits (83), Expect = 8.4, Method: Composition-based stats. Identities = 22/95 (23%), Positives = 36/95 (37%), Gaps = 13/95 (13%) Query: 222 EAIAAISR-LANAGIILLSQSVLLKGINDDPEILANLMRTFVEL----RIKPYYLHHPDL 276 E +AA R +A G + + VL++ +NDD A L R L + PY + Sbjct: 264 ELLAACRRYVARTGRRVTFEYVLIEDVNDDERTAAELARRLRGLLCHVNLIPY-----NP 318 Query: 277 AAGTSHFRLTIEEGQKIVASLKEKISGLCQPFYIL 311 FR E + ++ E+ P + Sbjct: 319 TPAAPLFRRPGPERIERFRAVLER---YGIPATVR 350 >gi|188582088|ref|YP_001925533.1| MiaB-like tRNA modifying enzyme [Methylobacterium populi BJ001] gi|179345586|gb|ACB80998.1| MiaB-like tRNA modifying enzyme [Methylobacterium populi BJ001] Length = 410 Score = 36.2 bits (83), Expect = 8.4, Method: Composition-based stats. Identities = 41/193 (21%), Positives = 68/193 (35%), Gaps = 37/193 (19%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD 153 R + + + C C FC G + + A + I E EV+ TG D Sbjct: 128 HTRAFVPVQNGCDHRCTFCVIP--FGRGHSRSVPVAEAVAQVRRIVEHGG-REVVLTGVD 184 Query: 154 PLI------LSHKRLQKVLKT-LRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 L S L ++++T L + + LR S +D +PELI E + Sbjct: 185 -LTAYGRDLASDLSLGRLVRTILSEVPDLARLRLSS----IDSVEADPELIAAFAEESR- 238 Query: 207 VYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDPEILANLMRTFVELRI 266 + H + + ++ I + R+ + + L RT +LR Sbjct: 239 --LMPHVHLSLQAGDDLI--LKRMKRRHA--------------RADAIR-LCRTLRDLR- 278 Query: 267 KPYYLHHPDLAAG 279 P + DL AG Sbjct: 279 -PGLVFGADLIAG 290 >gi|313813065|gb|EFS50779.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes HL025PA1] gi|327330771|gb|EGE72517.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes HL097PA1] Length = 407 Score = 36.2 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 21/125 (16%), Positives = 43/125 (34%), Gaps = 22/125 (17%) Query: 62 PQKEELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC-FRREMVGS 120 P ++ + + + P G Y + C C +C F ++ + Sbjct: 6 PYPRITRRTMTHADNSLPELH--PADGPWSIY------LHVPFCASRCGYCDFNTYVLSA 57 Query: 121 QKGTV------LSSKDTEAALAYIQ-EKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIK 173 + ++ E A + + + + F GG P +LS +L ++ I Sbjct: 58 MGDDAVAGYLDAAHQELELAADALGDAQPPVSTIFFGGGTPTMLSPVQLGEL------ID 111 Query: 174 HVQIL 178 HV+ L Sbjct: 112 HVRTL 116 >gi|289642406|ref|ZP_06474552.1| molybdenum cofactor biosynthesis protein A [Frankia symbiont of Datisca glomerata] gi|289507751|gb|EFD28704.1| molybdenum cofactor biosynthesis protein A [Frankia symbiont of Datisca glomerata] Length = 328 Score = 36.2 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 41/222 (18%), Positives = 78/222 (35%), Gaps = 41/222 (18%) Query: 99 LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLIL 157 + L C + C +C E + + +L+ ++ + + + EV TGG+P L Sbjct: 16 VSLTDRCNLRCSYCMPAEGLAWLPRAGILTDEEIVRLVRIAVTRLGVDEVRLTGGEP-TL 74 Query: 158 SHKR--LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK-PVYIAIHAN 214 L L LR + + + + P L+ AG V +++ Sbjct: 75 RPGLVGLVARLARLRPRPQLSMTTNGIALVGMAPA---------LRAAGLDRVNVSLDTL 125 Query: 215 HPYEFSEEAIAAISRLANA-----------GIILLSQSVLLKGINDDPEILANLMRTFVE 263 P + RLA+A + + +VLL+G+NDD +L+R + Sbjct: 126 RPGRYQALTRR--DRLADAQAGLAAVAAAGLVPVKVNAVLLRGVNDDEA--PDLLRWCLR 181 Query: 264 LRIKPYYLHHPDLAA-----GTSHF-RLTIEEGQKIVASLKE 299 + + R + G +I+A L+ Sbjct: 182 RG------YQLRFIEQMPLDPQHSWDRAAMVTGAEILAGLRG 217 >gi|163741718|ref|ZP_02149108.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Phaeobacter gallaeciensis 2.10] gi|161384891|gb|EDQ09270.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Phaeobacter gallaeciensis 2.10] Length = 440 Score = 36.2 bits (83), Expect = 8.5, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 35/97 (36%), Gaps = 9/97 (9%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153 L + C +C FC G++ + + + A ++ + E+ G + Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRILREAQDLVER--GVREITLLGQNVN 206 Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 K L +++ L + ++ +RF + P Sbjct: 207 AYHGAGPNGDKTLAQLIWELDKVDGLERIRFTTSHPN 243 >gi|298708530|emb|CBJ49163.1| conserved unknown protein [Ectocarpus siliculosus] Length = 425 Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats. Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 20/95 (21%) Query: 194 PELIQCLKEAGKPVYIAIHANHP---YEFSEEAIAAISRLANAGIILLSQS--------- 241 P I+ +K + ++HA + +++ L +A +L QS Sbjct: 257 PAAIRRMKGMPSRLAWSVHAATDDVRRLLVPTTVHSMAELRDAFAEVL-QSRRREHLFVE 315 Query: 242 -VLLKGINDDPE---ILANLMRTF-VELRI--KPY 269 VL++G+ND PE LA+L+R + I PY Sbjct: 316 VVLIEGMNDSPELARALASLLRPLPIRAGINLLPY 350 >gi|218288632|ref|ZP_03492909.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius LAA1] gi|218241289|gb|EED08464.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius LAA1] Length = 475 Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 50/158 (31%), Gaps = 30/158 (18%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C FC G + + +A ++ E++ T Sbjct: 142 RSRANLKIQDGCNNFCTFCIIPRARGLIRSRKPENVVLQATK---LARAGYREIVLTGIH 198 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 G D + RL +L L I +R S ++ I+ L+ L + K Sbjct: 199 TGGYGED---FENYRLADLLLDLERIDLPFRIRISS----IEASEIDDRLMDVLAAS-KK 250 Query: 207 VYIAIHA------------NHPYEFSEEAIAAISRLAN 232 V +H H + + E + L Sbjct: 251 VVPHLHIPLQAGSDPVLRRMHRHYTTAEYAEKLQELRR 288 >gi|163734559|ref|ZP_02141998.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter litoralis Och 149] gi|161392052|gb|EDQ16382.1| tRNA-i(6)A37 thiotransferase enzyme MiaB, putative [Roseobacter litoralis Och 149] Length = 426 Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats. Identities = 25/120 (20%), Positives = 39/120 (32%), Gaps = 14/120 (11%) Query: 74 REDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSK 129 ED + P R P L + C +C FC R V VL Sbjct: 117 PEDKFEELKARPK---ARRAPS-AFLTVQEGCDKFCAFCVVPYTRGAEVSRPVTRVLDEA 172 Query: 130 D--TEAALAYIQEKSQ-IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 E + I Q + G D + + L +++ L I ++ +RF + P Sbjct: 173 RDLVERGVREITLLGQNVNAYHGAGADG---NEQTLAQLIWALNDIDGLERIRFTTSHPN 229 >gi|187929569|ref|YP_001900056.1| pyrroloquinoline quinone biosynthesis protein PqqE [Ralstonia pickettii 12J] gi|309781652|ref|ZP_07676386.1| coenzyme PQQ biosynthesis protein E [Ralstonia sp. 5_7_47FAA] gi|187726459|gb|ACD27624.1| coenzyme PQQ biosynthesis protein E [Ralstonia pickettii 12J] gi|308919627|gb|EFP65290.1| coenzyme PQQ biosynthesis protein E [Ralstonia sp. 5_7_47FAA] Length = 400 Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats. Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 12/107 (11%) Query: 68 NILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLS 127 N D + +P+ G P +L +L + CP++C FC + ++ LS Sbjct: 4 NAAGSFEADSLLAPAATPMPGP----PLWLLAELTYRCPLHCAFCS-NPVDYTRHDQELS 58 Query: 128 SKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKH 174 ++ + + ++ +GG+PL+ L+TL H Sbjct: 59 TEQWCDVFTQARALGAV-QLGLSGGEPLLRKD------LETLVAHAH 98 >gi|189426248|ref|YP_001953425.1| MiaB-like tRNA modifying enzyme YliG [Geobacter lovleyi SZ] gi|238066235|sp|B3EAM2|RIMO_GEOLS RecName: Full=Ribosomal protein S12 methylthiotransferase RimO; Short=S12 MTTase; Short=S12 methylthiotransferase; AltName: Full=Ribosome maturation factor RimO gi|189422507|gb|ACD96905.1| MiaB-like tRNA modifying enzyme YliG [Geobacter lovleyi SZ] Length = 449 Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 41/116 (35%), Gaps = 16/116 (13%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVIFTGGDP 154 LK+ C C +C + G + + + + E + + E+I D Sbjct: 153 AYLKIGEGCSNCCTYCVIPSLRGPYRSRPVEALVAEAERLVK-----GGVRELILVSQDI 207 Query: 155 L-----ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGK 205 + L +++ L I+ ++ +R P I+ ELI+ K K Sbjct: 208 TRYGSDMDDTSSLAGLIRRLAAIEDLKWIRL----LYAYPDGISDELIELFKTEPK 259 >gi|50842395|ref|YP_055622.1| coproporphyrinogen III oxidase [Propionibacterium acnes KPA171202] gi|282854145|ref|ZP_06263482.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes J139] gi|50839997|gb|AAT82664.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes KPA171202] gi|282583598|gb|EFB88978.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes J139] Length = 393 Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 14/89 (15%) Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTV------LSSKDTEAALAYIQ-EKSQIWEVIF 149 + + C C +C F ++ + + ++ E A + + + + F Sbjct: 20 IYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHRELELAADALGDAQPPVSTIFF 79 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 GG P +LS +L ++ I H++ L Sbjct: 80 GGGTPTMLSPVQLGEL------IDHIRTL 102 >gi|46199876|ref|YP_005543.1| florfenicol resistance protein [Thermus thermophilus HB27] gi|81567593|sp|Q72HC1|RLMN_THET2 RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|46197503|gb|AAS81916.1| florfenicol resistance protein [Thermus thermophilus HB27] Length = 355 Score = 36.2 bits (83), Expect = 8.6, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 74/203 (36%), Gaps = 51/203 (25%) Query: 93 YPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIW 145 Y +R + L + CP C FC + G L++ + L I +I Sbjct: 95 YENRKTVCLSTMVGCPAGCTFCATGAL---GFGRNLTAAEILDQLLTIAYHQGLSPREIR 151 Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--- 201 V+ G G+PL+ L+ VLK +R + H + + P+R+ + K Sbjct: 152 NVVLMGMGEPLL----NLRNVLKAVRIM-------LHKKALALSPRRVTLSTVGIPKGIY 200 Query: 202 -----EAGKPVYIAIHA------------NHPY---EFSEEAIAAISRLANAGIILLSQS 241 + G + +++HA H Y E E ++ + Sbjct: 201 RLAEEDLGVRLALSLHAPDDETRRKIIPTAHRYPIAEIMEAVRHYHAKTKRRVTFEYT-- 258 Query: 242 VLLKGINDD---PEILANLMRTF 261 LLKG+ND +LA L++ Sbjct: 259 -LLKGVNDHLWQARLLAKLLKGL 280 >gi|260888390|ref|ZP_05899653.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185] gi|330838294|ref|YP_004412874.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185] gi|260861926|gb|EEX76426.1| radical SAM domain protein [Selenomonas sputigena ATCC 35185] gi|329746058|gb|AEB99414.1| Radical SAM domain protein [Selenomonas sputigena ATCC 35185] Length = 346 Score = 35.9 bits (82), Expect = 8.6, Method: Composition-based stats. Identities = 34/164 (20%), Positives = 55/164 (33%), Gaps = 27/164 (16%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R L++ ++C C +C R + L S++ + V+ G D Sbjct: 52 RGLIEFTNICRRSCFYCGLRRENERAERYRLRSQEIVRLAQNARGYGYRTVVLQGGEDGY 111 Query: 156 ILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANH 215 +RL +L+ +R + V L R E + LKEAG ++ Sbjct: 112 WH-VERLAPILREIRALGLVITLSIGER---------TEEEYRALKEAGASRFLLRIETT 161 Query: 216 PYEF--------SEEAIAAI-SRLANAGIILLS--------QSV 242 E S EA A + L G + + QSV Sbjct: 162 DRELYERLDPGMSWEARRACLASLRALGYEVGTGSLVGLPGQSV 205 >gi|149202109|ref|ZP_01879082.1| tRNA-i(6)A37 modification enzyme MiaB [Roseovarius sp. TM1035] gi|149144207|gb|EDM32238.1| tRNA-i(6)A37 modification enzyme MiaB [Roseovarius sp. TM1035] Length = 440 Score = 35.9 bits (82), Expect = 8.6, Method: Composition-based stats. Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 21/137 (15%) Query: 73 EREDPIGDNNHSPLKGIVHRYPDR----ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS 128 + E PI D + + HR R L + C +C FC G++ + +S Sbjct: 127 DTEFPIEDKFDT----LRHRPKARRGPTAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPAS 181 Query: 129 KDTEAALAYIQEKSQIWEVIFTGGD------PLILSHKRLQKVLKTLRYIKHVQILRFHS 182 + E A ++ + E+ G + L +++ L I ++ +RF + Sbjct: 182 RVLEEARDLVER--GVREITLLGQNVNAYHGAGEGGDWGLARLVWALSEIDGLERIRFTT 239 Query: 183 RVPIVDPQRINPELIQC 199 P ++ +LI Sbjct: 240 SHPND----MDDDLIAA 252 >gi|88195773|ref|YP_500582.1| hypothetical protein SAOUHSC_02090 [Staphylococcus aureus subsp. aureus NCTC 8325] gi|221141450|ref|ZP_03565943.1| hypothetical protein SauraJ_07398 [Staphylococcus aureus subsp. aureus str. JKD6009] gi|87203331|gb|ABD31141.1| conserved hypothetical phage protein [Staphylococcus aureus subsp. aureus NCTC 8325] gi|302751749|gb|ADL65926.1| putative Fe-S oxidoreductase [Staphylococcus aureus subsp. aureus str. JKD6008] gi|329728682|gb|EGG65112.1| YfkB-like domain protein [Staphylococcus aureus subsp. aureus 21189] Length = 381 Score = 35.9 bits (82), Expect = 8.6, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 16/114 (14%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 + P E + + ++ L I ++C + C C + Sbjct: 10 IQNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56 Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 57 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 109 >gi|304379061|ref|ZP_07361808.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] gi|304342296|gb|EFM08188.1| radical SAM superfamily domain protein [Staphylococcus aureus subsp. aureus ATCC BAA-39] Length = 381 Score = 35.9 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 42/115 (36%), Gaps = 16/115 (13%) Query: 66 ELNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTV 125 ++ P E + + ++ L I ++C + C C Sbjct: 9 IIHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQT 55 Query: 126 LSSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 56 VDPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 109 >gi|254521416|ref|ZP_05133471.1| lysophospholipase [Stenotrophomonas sp. SKA14] gi|219719007|gb|EED37532.1| lysophospholipase [Stenotrophomonas sp. SKA14] Length = 583 Score = 35.9 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 27/60 (45%) Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 R+ + Q+++ +++ G P +LD+ G+G+ ++ + + D ++ Sbjct: 383 RVRGQHLQELLRDAAQRLRGQGTPVRVLDVAAGHGRYVLEALGQGEQRADRIVLRDFSDL 442 >gi|254467232|ref|ZP_05080643.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium Y4I] gi|206688140|gb|EDZ48622.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Rhodobacterales bacterium Y4I] Length = 440 Score = 35.9 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 15/97 (15%), Positives = 34/97 (35%), Gaps = 9/97 (9%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD-- 153 L + C +C FC G++ + + + A ++ + E+ G + Sbjct: 150 TAFLTVQEGCDKFCAFCVVPYTRGAEV-SRPADRILREAQDLVER--GVREITLLGQNVN 206 Query: 154 ----PLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 L +++ L I ++ +RF + P Sbjct: 207 AYHGAGPNGDLTLAQLIWELDKIDGLERIRFTTSHPN 243 >gi|190576078|ref|YP_001973923.1| putative hydrolase [Stenotrophomonas maltophilia K279a] gi|190014000|emb|CAQ47640.1| putative hydrolase [Stenotrophomonas maltophilia K279a] Length = 583 Score = 35.9 bits (82), Expect = 8.7, Method: Composition-based stats. Identities = 9/60 (15%), Positives = 27/60 (45%) Query: 284 RLTIEEGQKIVASLKEKISGLCQPFYILDLPGGYGKVKIDTHNIKKVGNGSYCITDHHNI 343 R+ + Q+++ +++ G P +LD+ G+G+ ++ + + D ++ Sbjct: 383 RVRGQHLQELLRDAAQRLRGQGTPVRVLDVAAGHGRYVLEALGQGEQRADRIVLRDFSDL 442 >gi|332982414|ref|YP_004463855.1| hypothetical protein Mahau_1856 [Mahella australiensis 50-1 BON] gi|332700092|gb|AEE97033.1| protein of unknown function DUF512 [Mahella australiensis 50-1 BON] Length = 436 Score = 35.9 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 14/88 (15%) Query: 195 ELIQCLKEAGKPVYIAIHANHP--YEF------SEEAIAAISRLANAGIILLSQSVLLKG 246 ++ + K P+Y++IHA P F ++ + + R I++ Q VL G Sbjct: 134 DIDRITKMHISPLYVSIHAVDPKVRSFMLGIPETDNIMNILQRFKEHNIMVHGQMVLCPG 193 Query: 247 IN------DDPEILANLMRTFVELRIKP 268 IN D + L L + L + P Sbjct: 194 INDGDVLDDSIKRLMELWPSLQSLAVVP 221 >gi|311899066|dbj|BAJ31474.1| putative molybdenum cofactor biosynthesis protein A [Kitasatospora setae KM-6054] Length = 346 Score = 35.9 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 32/182 (17%), Positives = 62/182 (34%), Gaps = 36/182 (19%) Query: 93 YPDRIL---LKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y R + + L C + C +C E + K +L+ ++ +A + EV Sbjct: 23 YGRRAVDLRVSLTDRCNLRCTYCMPEEGLSWLGKPELLTDEEIVRLVALAVGTLGVREVR 82 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH----------VQILRFHSRV-------PIVDPQR 191 FTGG+PL+ L ++ ++ + + R + V Sbjct: 83 FTGGEPLL--RPGLVGIIAACAALEPRPEVSLTTNGIGLARIAPALRDAGVDRVNVSLDT 140 Query: 192 INPELIQCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDDP 251 ++P+ L + H A A + L + +VL++G+ND Sbjct: 141 LDPDTFATLTRRRR---------HQDVLDGLAAAEAAGLR----PVKLNAVLMRGVNDHE 187 Query: 252 EI 253 Sbjct: 188 AA 189 >gi|224368537|ref|YP_002602700.1| MoaA1 [Desulfobacterium autotrophicum HRM2] gi|223691253|gb|ACN14536.1| MoaA1 [Desulfobacterium autotrophicum HRM2] Length = 329 Score = 35.9 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 38/180 (21%), Positives = 65/180 (36%), Gaps = 23/180 (12%) Query: 91 HRYPDRILLKLLHVCPVYCRFCFRRE-MVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 HR+ + + + + C + C +C +L+ ++ + K I +V Sbjct: 10 HRHLNYLRVSITDRCNLRCLYCIPDGIFPMLSHEEILTYEEILRIVKT-GSKMGISKVRI 68 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDP----------QRINPELIQC 199 TGG+PL+ K L L IK + + + +++ RIN L Sbjct: 69 TGGEPLV--RKGACDFLSRLSKIKGLLDISLTTNGVLLEKNIEQIKAAGIHRINVSLDTL 126 Query: 200 LKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGI-ILLSQSVLLKGINDDP-EILANL 257 + K + + I AG + V++KGINDD E LA L Sbjct: 127 QPKKYKQITRMNMF-------KRVWDGIMAAHAAGFSPIKLNVVVMKGINDDEIEDLARL 179 >gi|55981906|ref|YP_145203.1| ribosomal RNA large subunit methyltransferase N [Thermus thermophilus HB8] gi|81363686|sp|Q5SGZ3|RLMN_THET8 RecName: Full=Ribosomal RNA large subunit methyltransferase N; AltName: Full=23S rRNA m2A2503 methyltransferase gi|55773319|dbj|BAD71760.1| conserved hypothetical protein [Thermus thermophilus HB8] Length = 355 Score = 35.9 bits (82), Expect = 8.8, Method: Composition-based stats. Identities = 43/203 (21%), Positives = 74/203 (36%), Gaps = 51/203 (25%) Query: 93 YPDR--ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKS-----QIW 145 Y +R + L + CP C FC + G L++ + L I +I Sbjct: 95 YENRKTVCLSTMVGCPAGCTFCATGAL---GFGRNLTAAEILDQLLTIAYHQGLSPREIR 151 Query: 146 EVIFTG-GDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLK--- 201 V+ G G+PL+ L+ VLK +R + H + + P+R+ + K Sbjct: 152 NVVLMGMGEPLL----NLRNVLKAVRIM-------LHKKALALSPRRVTLSTVGIPKGIY 200 Query: 202 -----EAGKPVYIAIHA------------NHPY---EFSEEAIAAISRLANAGIILLSQS 241 + G + +++HA H Y E E ++ + Sbjct: 201 RLAEEDLGVRLALSLHAPDDETRRKIIPTAHRYPIAEIMEAVRHYHAKTKRRVTFEYT-- 258 Query: 242 VLLKGINDD---PEILANLMRTF 261 LLKG+ND +LA L++ Sbjct: 259 -LLKGVNDHLWQARLLAKLLKGL 280 >gi|151222027|ref|YP_001332849.1| hypothetical protein NWMN_1815 [Staphylococcus aureus subsp. aureus str. Newman] gi|150374827|dbj|BAF68087.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus str. Newman] Length = 381 Score = 35.9 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 42/114 (36%), Gaps = 16/114 (14%) Query: 67 LNILPEEREDPIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVL 126 ++ P E + + ++ L I ++C + C C + Sbjct: 10 IHNDPWEAYNDVKEHGQLTLSNIE--------FTTTNLCNMRCSHC-----AVGYTLQTV 56 Query: 127 SSKDTEAALAY--IQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 + + L Y + E + + TGG+P + S K ++ V+K L H + + Sbjct: 57 DPEPLDMDLIYRRLDEIPNLRTMSITGGEP-MFSKKSIRNVVKPLLKYAHHRGI 109 >gi|89053188|ref|YP_508639.1| (dimethylallyl)adenosine tRNA methylthiotransferase [Jannaschia sp. CCS1] gi|122999629|sp|Q28UJ8|MIAB_JANSC RecName: Full=(Dimethylallyl)adenosine tRNA methylthiotransferase miaB; AltName: Full=tRNA-i(6)A37 methylthiotransferase gi|88862737|gb|ABD53614.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Jannaschia sp. CCS1] Length = 462 Score = 35.9 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 16/97 (16%), Positives = 31/97 (31%), Gaps = 9/97 (9%) Query: 96 RILLKLLHVCPVYCRFC----FRREMVGSQKGTVLSSKD--TEAALAYIQEKSQIWEVIF 149 L + C +C FC R V +++ + + I Q Sbjct: 172 TAFLTVQEGCDKFCAFCVVPYTRGAEVSRSAERLMAEARDLVDRGVREITLLGQNVNAYH 231 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPI 186 GD L ++++ + I + +RF + P Sbjct: 232 GAGDGGTWG---LARLIREMAKIDGLDRIRFTTSHPN 265 >gi|290956407|ref|YP_003487589.1| hypothetical protein SCAB_19011 [Streptomyces scabiei 87.22] gi|260645933|emb|CBG69024.1| putative hypothetical protein [Streptomyces scabiei 87.22] Length = 801 Score = 35.9 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 42/116 (36%), Gaps = 16/116 (13%) Query: 98 LLKLLHVCPVYCRFCF---RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE-----VIF 149 ++K+ C + C C+ + + +S + I E + V+ Sbjct: 12 VIKVHSRCDLACDHCYVYQHADQSWRGRPGTMSEETFRRTAERIAEHAAAHRLPRVHVVL 71 Query: 150 TGGDPLILSHKRLQKVLKTLRY-IKHV--QILRFHSRVPIVDPQRINPELIQCLKE 202 GG+PL+ +RL+ + LR + V LR + R++ L E Sbjct: 72 HGGEPLLAGRERLRGYARALRSALDGVAALDLRMQTNGL-----RLDDAFCAMLVE 122 >gi|149919125|ref|ZP_01907609.1| hypothetical protein PPSIR1_35157 [Plesiocystis pacifica SIR-1] gi|149820055|gb|EDM79476.1| hypothetical protein PPSIR1_35157 [Plesiocystis pacifica SIR-1] Length = 261 Score = 35.9 bits (82), Expect = 8.9, Method: Composition-based stats. Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 5/83 (6%) Query: 96 RILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPL 155 R + C + C +C + +G S +A + + Q V+ TGG+PL Sbjct: 37 RSSFVRVSGCNLRCVWCDTPRTSWAPEGERAS---LDALVDWCGAPGQPRHVVLTGGEPL 93 Query: 156 ILSHKRLQKVLKTLRYIKHVQIL 178 + ++ LR H + Sbjct: 94 LFPAC--AELSARLRAAGHHLTI 114 >gi|326797578|ref|YP_004315397.1| molybdenum cofactor biosynthesis protein A [Sphingobacterium sp. 21] gi|326548342|gb|ADZ76727.1| molybdenum cofactor biosynthesis protein A [Sphingobacterium sp. 21] Length = 329 Score = 35.9 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 29/173 (16%), Positives = 62/173 (35%), Gaps = 24/173 (13%) Query: 88 GIVHRYPDRILLKLLHVCPVYCRFCF-RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWE 146 G +H Y + + L C + C +C + ++ + + + + + Sbjct: 10 GRLHNY---LRISLTDNCNLRCFYCMPEEHYAFTPHAKLMQVHEIDQLAKIFVDH-GVTK 65 Query: 147 VIFTGGDPLILSHKRLQKVLKTLRYIKHVQI------LRFH---SRVPIVDPQRINPELI 197 + TGG+PL+ +++ L + V++ +R + ++ + IN L Sbjct: 66 IRLTGGEPLVRKDAP--AIIEILSKLP-VELTMTTNGIRINDMLPQIVKANFSSINVSLD 122 Query: 198 QCLKEAGKPVYIAIHANHPYEFSEEAIAAISRLANAGIILLSQSVLLKGINDD 250 +E + + N I L I V++KG+NDD Sbjct: 123 TLQREKFNRITRRDYFNR-------VRHNIDLLIKEQIHTKINVVVMKGLNDD 168 >gi|239987825|ref|ZP_04708489.1| hypothetical protein SrosN1_11005 [Streptomyces roseosporus NRRL 11379] Length = 339 Score = 35.9 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +LL L CP+ C C G E + E+++ V+ TGG+PL+ Sbjct: 17 LLLGLTRRCPLSCAHCSTG--SGPLTRQQPDPAQLERFVGSFTEENRPDVVMLTGGEPLL 74 Query: 157 LSHKRLQKVLKTLRY 171 L L + L TL Sbjct: 75 LPA--LAERLSTLAR 87 >gi|94265921|ref|ZP_01289648.1| Radical SAM [delta proteobacterium MLMS-1] gi|93453545|gb|EAT03950.1| Radical SAM [delta proteobacterium MLMS-1] Length = 343 Score = 35.9 bits (82), Expect = 9.0, Method: Composition-based stats. Identities = 31/184 (16%), Positives = 59/184 (32%), Gaps = 36/184 (19%) Query: 104 VCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSH--KR 161 C + C +C+ + ++ LS + + + V+ GG+PL+ Sbjct: 36 ACNIRCIYCYAESGLPLEQELTLS--EIKQVVDQAAGLGARKVVVLGGGEPLLYPDIFTV 93 Query: 162 LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHANHPYEFSE 221 L +L I + I P + + LKE + V + + N + Sbjct: 94 LDYILNKGMKAD---IFTNGT--------LITPAVARHLKE--REVAVVVKMNSRDAAVQ 140 Query: 222 EAIAAIS-----------RLANAGII-----LLSQSVLLKGINDDPEILANLMRTFVELR 265 + +A L G L Q+++ + + L +L R Sbjct: 141 DLLAGCRGTFAAIEKGLAALREVGYPGDNLLLGVQTIVCRH---NYRELPDLWRWARRRN 197 Query: 266 IKPY 269 I PY Sbjct: 198 IIPY 201 >gi|299138990|ref|ZP_07032167.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8] gi|298599144|gb|EFI55305.1| Radical SAM domain protein [Acidobacterium sp. MP5ACTX8] Length = 534 Score = 35.9 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 29/176 (16%), Positives = 62/176 (35%), Gaps = 28/176 (15%) Query: 103 HVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGD----PLILS 158 CP +C FC G + ++ + I + ++ D P+ L+ Sbjct: 167 RGCPKHCSFCSVWR----TDGQQPRQRRFQSVIDEIVDLRRLGFRFIALADDNFYPVTLT 222 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIHAN-HPY 217 RL + + + +R +R +L++ L + K + Sbjct: 223 DLRLAREQNNTAKVDELMAIRT---------ERF--QLMEELAKLPKDMVFFTQITMEAG 271 Query: 218 EFSEEAIAAISRLANAGIILLSQSVL---LKGI----NDDPEILANLMRTFVELRI 266 E E + A+ + G ++ ++V LK + N + LA ++TF + + Sbjct: 272 E-DGEYLDAMRKANIKGALVGVEAVTPEGLKAVFKDFNYSGDALAKQLQTFKKHGV 326 >gi|239941362|ref|ZP_04693299.1| hypothetical protein SrosN15_10231 [Streptomyces roseosporus NRRL 15998] gi|291444804|ref|ZP_06584194.1| predicted protein [Streptomyces roseosporus NRRL 15998] gi|291347751|gb|EFE74655.1| predicted protein [Streptomyces roseosporus NRRL 15998] Length = 351 Score = 35.9 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 4/75 (5%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 +LL L CP+ C C G E + E+++ V+ TGG+PL+ Sbjct: 17 LLLGLTRRCPLSCAHCSTG--SGPLTRQQPDPAQLERFVGSFTEENRPDVVMLTGGEPLL 74 Query: 157 LSHKRLQKVLKTLRY 171 L L + L TL Sbjct: 75 LPA--LAERLSTLAR 87 >gi|72161103|ref|YP_288760.1| hypothetical protein Tfu_0699 [Thermobifida fusca YX] gi|71914835|gb|AAZ54737.1| hypothetical protein Tfu_0699 [Thermobifida fusca YX] Length = 306 Score = 35.9 bits (82), Expect = 9.1, Method: Composition-based stats. Identities = 15/91 (16%), Positives = 34/91 (37%), Gaps = 17/91 (18%) Query: 121 QKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRF 180 + +DT+ A + E +++ + ++ L V+ R Sbjct: 168 DFDVLPGREDTQRIAALLVEHARMTP-----------------RFIEYLLRHPQVRDARG 210 Query: 181 HSRVPIVDPQRINPELIQCLKEAGKPVYIAI 211 S V + P+ + ++ L+ G+PV +A Sbjct: 211 RSTVVVCSPEHLAADVFARLRAYGRPVVVAT 241 >gi|323140819|ref|ZP_08075734.1| iron-only hydrogenase maturation rSAM protein HydG [Phascolarctobacterium sp. YIT 12067] gi|322414701|gb|EFY05505.1| iron-only hydrogenase maturation rSAM protein HydG [Phascolarctobacterium sp. YIT 12067] Length = 471 Score = 35.9 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 18/86 (20%), Positives = 34/86 (39%), Gaps = 4/86 (4%) Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y +RI+L + C +C +C L+ + A + +Q+ + Sbjct: 80 YGNRIVLFAPLYLSNYCINHCVYCPYHATNKHIGRKKLTQDEVRAEVIALQDMGHKRLAL 139 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174 G DP+ + + +KT+ IKH Sbjct: 140 EAGEDPVNNPIEYILDCIKTIYSIKH 165 >gi|332186015|ref|ZP_08387761.1| molybdenum cofactor biosynthesis protein A [Sphingomonas sp. S17] gi|332013830|gb|EGI55889.1| molybdenum cofactor biosynthesis protein A [Sphingomonas sp. S17] Length = 339 Score = 35.9 bits (82), Expect = 9.2, Method: Composition-based stats. Identities = 29/166 (17%), Positives = 65/166 (39%), Gaps = 26/166 (15%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C + CR+C +M + +LS + + + + +GG+PL+ Sbjct: 27 ISVTDRCDLRCRYCMAEQMTFLPRAKLLSLDEIAIIAERFIAR-GVTRIRLSGGEPLVRR 85 Query: 159 HKRLQKVLKTL-----RYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAG-KPVYIAIH 212 + +++ L + + + +R+ E L AG + + +++ Sbjct: 86 D--VADLVRRLGTHVGHGLDELTMTTNGTRL---------AEHADTLASAGIRRINVSLD 134 Query: 213 ANHPYEFS--------EEAIAAISRLANAGIILLSQSVLLKGINDD 250 + P F + I I +AG+++ V LKG+N+D Sbjct: 135 SRDPERFRYITRHGDVGQVIHGILSARDAGLMIKINMVALKGLNED 180 >gi|322508770|gb|ADX04224.1| Molybdopterin biosynthesis, protein A [Acinetobacter baumannii 1656-2] gi|323518373|gb|ADX92754.1| molybdenum cofactor biosynthesis protein [Acinetobacter baumannii TCDC-AB0715] Length = 346 Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 15/160 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C K +LS + ++ ++ I + TGG+PL+ Sbjct: 29 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCHFMVQQ-GIQSIRITGGEPLM-- 85 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216 + + ++ L+ +K + + R + + + LK+AG + I++ + P Sbjct: 86 RQGIVHFIRDLQSLKSLGLKRIS----MTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPV 141 Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + E + I G+ VL+K NDD Sbjct: 142 QFKELTKKKLEPVLEGIQAAKEVGLPFKINCVLMKDRNDD 181 >gi|292656271|ref|YP_003536168.1| coenzyme PQQ synthesis protein E-like protein [Haloferax volcanii DS2] gi|291370056|gb|ADE02283.1| coenzyme PQQ synthesis protein E homolog [Haloferax volcanii DS2] Length = 396 Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 1/70 (1%) Query: 90 VHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIF 149 R P ++ ++ C + C C R + ++ L++ + + L +E V+ Sbjct: 40 TSRRPFVLIWEVTQACDLACDHC-RADATPARHPDELTTAEGKRLLDQAREFGPGQLVVL 98 Query: 150 TGGDPLILSH 159 +GGDPL S Sbjct: 99 SGGDPLARSD 108 >gi|260554717|ref|ZP_05826938.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii ATCC 19606] gi|260411259|gb|EEX04556.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii ATCC 19606] Length = 346 Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 15/160 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C K +LS + ++ ++ I + TGG+PL+ Sbjct: 29 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCHFMVQQ-GIESIRITGGEPLM-- 85 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216 + + ++ L+ +K + + R + + + LK+AG + I++ + P Sbjct: 86 RQGIVHFIRDLQSLKSLGLKRIS----MTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPV 141 Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + E + I G+ VL+K NDD Sbjct: 142 QFKELTKKKLEPVLEGIQAAKEVGLPFKINCVLMKDRNDD 181 >gi|304317387|ref|YP_003852532.1| biotin and thiamin synthesis associated [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778889|gb|ADL69448.1| biotin and thiamin synthesis associated [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 466 Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 6/112 (5%) Query: 65 EELNILPEEREDPIGDNNHSPLKGIVHR-YPDRIL----LKLLHVCPVYCRFCFRREMVG 119 EE +L +D I + + + I + Y +RI+ L + + C CR+C + Sbjct: 45 EEAAVLLNLDDDEILEEMYKVARYIKEQIYGNRIVIFAPLYISNYCVNNCRYCGYKH-SN 103 Query: 120 SQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILSHKRLQKVLKTLRY 171 Q+ L+ + + ++E + G DP+ + V+KT+ Sbjct: 104 EQERKKLTMDEVRREIEILEEMGHKRLAVEAGEDPVNCPIDYVLDVIKTIYD 155 >gi|225874701|ref|YP_002756160.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196] gi|225792341|gb|ACO32431.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196] Length = 398 Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 35/189 (18%), Positives = 66/189 (34%), Gaps = 40/189 (21%) Query: 99 LKLLHVCPVYCRFCFRR--EMVGSQKGTVLSSKDT----EAA------LAYIQEKSQIWE 146 + C CR+C+ R + ++ +AA L ++ +I Sbjct: 76 VNPYRGCEFACRYCYARYTHEFLEMRDPAQFEREIYVKQQAAWLLRRDLHQVKAGEEI-- 133 Query: 147 VIFTGGDPLILSHKRL---QKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEA 203 I T DP +R+ + +L+ L + +I + I + I LKE Sbjct: 134 AIGTATDPYQPMERRMGVTRSLLEVLAEHRGYEI------GIVTKSALITRD-IDVLKEV 186 Query: 204 GKPVYIAIHAN------HPYEF------SEEAI-AAISRLANAGII--LLSQSVLLKGIN 248 + + +H H + + RL AG++ +L+ S LL G+ Sbjct: 187 ARHNRLVLHVTITTPEVHLARILEPRAPRPDIRFETVRRLREAGLMAGILN-SPLLPGLT 245 Query: 249 DDPEILANL 257 D+ L + Sbjct: 246 DNAAALHRM 254 >gi|31544373|ref|NP_852951.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str. R(low)] gi|31541217|gb|AAP56519.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str. R(low)] gi|284930415|gb|ADC30354.1| coproporphyrinogen III oxidase [Mycoplasma gallisepticum str. R(high)] Length = 348 Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 33/167 (19%), Positives = 56/167 (33%), Gaps = 44/167 (26%) Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTVLSSKDTEAALAYIQ----EKSQIWEVIFTGG 152 L L +C C FC F+RE++ K + + I+ Q + GG Sbjct: 5 LYIHLPLCQKICTFCDFKRELI----DRHNPKKVVQDLIDEIERKQFSDEQFSSIYLGGG 60 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSR----VPIVDPQRINPELIQCLKE-----A 203 P + + L L ++ + ++ +P + Q LK+ A Sbjct: 61 TPNVFDDELLDYFLSKIKK--------YAAKKCEFTIECNPDLVTKSQAQILKKNLVNRA 112 Query: 204 GKPVYIA----------IH-ANHPYEFSEEAIAAISRLANAGIILLS 239 + I H NH YE A+ L +AGI ++ Sbjct: 113 SVGIQIVNNKILKYLNRTHDINHCYE-------AMQNLYDAGITNIN 152 >gi|119387052|ref|YP_918107.1| radical SAM domain-containing protein [Paracoccus denitrificans PD1222] gi|119377647|gb|ABL72411.1| Radical SAM domain protein [Paracoccus denitrificans PD1222] Length = 413 Score = 35.9 bits (82), Expect = 9.3, Method: Composition-based stats. Identities = 13/72 (18%), Positives = 28/72 (38%), Gaps = 12/72 (16%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSS--------KDTEAALAYIQEKSQIWEVI 148 +++K+ C + C +C+ G + + EA L I + ++ Sbjct: 11 LIVKVAERCNIACTYCY--FFFGGDESHKFHPPYVNEETAAEIEAFLDRITADGAVENLM 68 Query: 149 --FTGGDPLILS 158 F GG+P++ Sbjct: 69 IYFHGGEPMMAP 80 >gi|258511464|ref|YP_003184898.1| RNA modification enzyme, MiaB family [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478190|gb|ACV58509.1| RNA modification enzyme, MiaB family [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 497 Score = 35.9 bits (82), Expect = 9.4, Method: Composition-based stats. Identities = 27/147 (18%), Positives = 53/147 (36%), Gaps = 20/147 (13%) Query: 73 EREDPIGDN-NHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDT 131 E D + P + + R + + + C +C +C + V S+ Sbjct: 180 EVWDNAPETVEDWPK---LRKDRVRAWVNVQYGCNKFCTYC-----IVPYTRGVERSRLP 231 Query: 132 EAALAYIQE--KSQIWEVIFTG---GDPLI-LSHKRLQKVLKTLRYIKHVQILRFHSRVP 185 E L + E + ++ G D + L ++L+ + + V +RF + Sbjct: 232 EDVLREVAELVQEGYQDITLLGQNVNDYGVDLGTTNFARLLRQVNAVPGVGWIRFTTS-- 289 Query: 186 IVDPQRINPELIQCLKEAGKPVYIAIH 212 +P ELI + E+ + V IH Sbjct: 290 --NPWNFTDELIDAIAES-ENVVEHIH 313 >gi|118575403|ref|YP_875146.1| thiamine biosynthesis enzyme [Cenarchaeum symbiosum A] gi|118193924|gb|ABK76842.1| thiamine biosynthesis enzyme [Cenarchaeum symbiosum A] Length = 368 Score = 35.9 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Query: 95 DRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDP 154 + I+L +VC C+FC G ++ L+ + EA + +E +I +V+ GG Sbjct: 62 NNIILNYTNVCITDCKFCAFYRSPGHEEAYTLTLDEIEARVKTAREMFKITQVLIQGG-- 119 Query: 155 LILSHKRLQKVLKTLRYI 172 +L+ R I Sbjct: 120 -HNPKLKLEYYEDAFRMI 136 >gi|114800325|ref|YP_762198.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Hyphomonas neptunium ATCC 15444] gi|114740499|gb|ABI78624.1| tRNA-i(6)A37 thiotransferase enzyme MiaB [Hyphomonas neptunium ATCC 15444] Length = 425 Score = 35.9 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 55/145 (37%), Gaps = 15/145 (10%) Query: 77 PIGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALA 136 + + + G+ R R +++ + C C FC G + + + A + Sbjct: 125 SVRETAAHLIDGMEGR--ARAYVQVQNGCDHRCTFCIIP--YGRGNSRSVPAGEVVAQVR 180 Query: 137 YIQEKSQIWEVIFTGGD----PLILS-HKRLQKVLKTLRY-IKHVQILRFHSRVPIVDPQ 190 + +EV+ TG D L L +++ + + ++ LR S + ++ Sbjct: 181 ALAASGH-YEVVLTGVDLTSWGADLPGTPELGNLVQRILKLVPELRALRI-SSIDAIE-- 236 Query: 191 RINPELIQCLKEAGKPVYIAIHANH 215 ++ LI+ L + Y+ + H Sbjct: 237 -MDDALIEALADPRVAPYLHLSLQH 260 >gi|15889001|ref|NP_354682.1| molybdenum cofactor biosynthesis protein A [Agrobacterium tumefaciens str. C58] gi|24211986|sp|Q8UER0|MOAA_AGRT5 RecName: Full=Molybdenum cofactor biosynthesis protein A gi|15156789|gb|AAK87467.1| molybdenum cofactor biosynthesis protein A [Agrobacterium tumefaciens str. C58] Length = 349 Score = 35.9 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 5/78 (6%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C M K +L+ ++ + + + ++ TGG+PL+ Sbjct: 34 VSVTDRCDFRCTYCMSEHMTFLPKKDLLTLEELDRLCSVFI-TRGVRKLRLTGGEPLV-- 90 Query: 159 HKRLQKVLKTLRYIKHVQ 176 K + +++ L HVQ Sbjct: 91 RKNIMSLVRNLGR--HVQ 106 >gi|332873937|ref|ZP_08441877.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii 6014059] gi|332737923|gb|EGJ68810.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii 6014059] Length = 344 Score = 35.9 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 15/160 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C K +LS + ++ ++ I + TGG+PL+ Sbjct: 27 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCHFMVQQ-GIQSIRITGGEPLM-- 83 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216 + + ++ L+ +K + + R + + + LK+AG + I++ + P Sbjct: 84 RQGIVHFIRDLQSLKSLGLKRIS----MTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPV 139 Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + E + I G+ VL+K NDD Sbjct: 140 QFKELTKKKLEPVLEGIQAAKEVGLPFKINCVLMKDRNDD 179 >gi|314923123|gb|EFS86954.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes HL001PA1] gi|314966890|gb|EFT10989.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes HL082PA2] gi|314981234|gb|EFT25328.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes HL110PA3] gi|315091802|gb|EFT63778.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes HL110PA4] gi|315093189|gb|EFT65165.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes HL060PA1] gi|315103305|gb|EFT75281.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes HL050PA2] gi|315105512|gb|EFT77488.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes HL030PA1] gi|327327714|gb|EGE69490.1| putative oxygen-independent coproporphyrinogen III oxidase [Propionibacterium acnes HL103PA1] Length = 397 Score = 35.9 bits (82), Expect = 9.5, Method: Composition-based stats. Identities = 16/89 (17%), Positives = 35/89 (39%), Gaps = 14/89 (15%) Query: 98 LLKLLHVCPVYCRFC-FRREMVGSQKGTV------LSSKDTEAALAYIQ-EKSQIWEVIF 149 + + C C +C F ++ + + ++ E A + + + + F Sbjct: 24 IYLHVPFCASRCGYCDFNTYVLSAMGDDAVAGYLDAAHRELELAADALGDAQPPVSTIFF 83 Query: 150 TGGDPLILSHKRLQKVLKTLRYIKHVQIL 178 GG P +LS +L ++ I H++ L Sbjct: 84 GGGTPTMLSPVQLGEL------IDHIRTL 106 >gi|331269245|ref|YP_004395737.1| Radical SAM domain-containing protein [Clostridium botulinum BKT015925] gi|329125795|gb|AEB75740.1| Radical SAM domain protein [Clostridium botulinum BKT015925] Length = 456 Score = 35.9 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF E V+S + + A+ ++ S EV GG+PL Sbjct: 99 LNVTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVIAHSGPRKNIEVDLFGGEPL 158 >gi|253682419|ref|ZP_04863216.1| heme biosynthesis [Clostridium botulinum D str. 1873] gi|253562131|gb|EES91583.1| heme biosynthesis [Clostridium botulinum D str. 1873] Length = 456 Score = 35.9 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF E V+S + + A+ ++ S EV GG+PL Sbjct: 99 LNVTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVIAHSGPRKNIEVDLFGGEPL 158 >gi|118444426|ref|YP_877912.1| Heme biosynthesis [Clostridium novyi NT] gi|118134882|gb|ABK61926.1| Heme biosynthesis [Clostridium novyi NT] Length = 431 Score = 35.9 bits (82), Expect = 9.6, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIW---EVIFTGGDPL 155 L + H C + C++CF E V+S + + A+ ++ S EV GG+PL Sbjct: 74 LNVTHDCNLRCKYCFADEGKYHGARKVMSPEVGKKAIDFVIAHSGPRKNIEVDLFGGEPL 133 >gi|297531162|ref|YP_003672437.1| coproporphyrinogen dehydrogenase [Geobacillus sp. C56-T3] gi|297254414|gb|ADI27860.1| Coproporphyrinogen dehydrogenase [Geobacillus sp. C56-T3] Length = 519 Score = 35.9 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 31/164 (18%), Positives = 61/164 (37%), Gaps = 21/164 (12%) Query: 78 IGDNNHSPLKGIVHRYPDRILLKLLHVCPVYCRFCFRREMV-GSQKGTVLSSKDTEAALA 136 I D + + + + + + CP C +C + G S A L Sbjct: 177 IVDRQLTVVPDLYDLAHEVSIYIGIPFCPTKCAYCT---FPAYAINGRQGSVDAFLAGLH 233 Query: 137 Y--------IQEKS-QIWEVIFTGGDPLILSHKRLQKVLKTLRYI-KHVQILRFHSRVPI 186 Y ++E+ +I + + GG P ++ + ++ + + V +R + V Sbjct: 234 YEMEAVGRFLRERGIRITTIYYGGGTPTSITADEMDRLYAHMYDVFPDVDRVREIT-VEA 292 Query: 187 VDPQRINPELIQCLKEAG-KPVYIAIHANHPYEFSEEAIAAISR 229 P I PE ++ LK+ + I P + +E + AI R Sbjct: 293 GRPDTITPEKLEVLKKWRIDRISIN-----PQSYIQETLKAIGR 331 >gi|239501595|ref|ZP_04660905.1| molybdenum cofactor biosynthesis protein A [Acinetobacter baumannii AB900] Length = 343 Score = 35.9 bits (82), Expect = 9.7, Method: Composition-based stats. Identities = 31/160 (19%), Positives = 63/160 (39%), Gaps = 15/160 (9%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLILS 158 + + C C +C K +LS + ++ ++ I + TGG+PL+ Sbjct: 26 ISVTDRCNFKCVYCMPEHPEWLNKQDLLSFEALFQFCHFMVQQ-GIESIRITGGEPLM-- 82 Query: 159 HKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP-VYIAIHANHP- 216 + + ++ L+ +K + + R + + + LK+AG + I++ + P Sbjct: 83 RQGIVHFIRDLQSLKSLGLKRIS----MTTNGHYLAKHAKQLKDAGLDDLNISLDSLDPV 138 Query: 217 --YEFS----EEAIAAISRLANAGIILLSQSVLLKGINDD 250 E + E + I G+ VL+K NDD Sbjct: 139 QFKELTKKKLEPVLEGIQAAKEVGLPFKINCVLMKDRNDD 178 >gi|307130560|ref|YP_003882576.1| molybdopterin biosynthesis protein A [Dickeya dadantii 3937] gi|306528089|gb|ADM98019.1| molybdopterin biosynthesis protein A [Dickeya dadantii 3937] Length = 329 Score = 35.9 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 33/222 (14%), Positives = 73/222 (32%), Gaps = 46/222 (20%) Query: 99 LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQ------EKSQIWEVIFTGG 152 L + VC C +C + + + +L I+ +V TGG Sbjct: 18 LSITDVCNFRCTYC----LPDGYQPNGATPHRFL-SLDEIRRVGRAFADLGTEKVRLTGG 72 Query: 153 DPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIAIH 212 +P L + ++ +R ++ L + R+ ++ +EAG + + Sbjct: 73 EP-SLRRDFVD-IIAAIRENPAIRTL-----AVTTNGYRLARDVASW-REAGLT-ALNVS 123 Query: 213 ANH--PYEFSE-----EAIAAISRLANAGI----ILLSQSVLLKGINDDPEILANLMRTF 261 + P +F + + + A + +VL++ IND +L Sbjct: 124 VDSLDPRQFHAITGQDKFRQVMDGIDAAFANGFRRVKVNTVLMRDINDS-----SLHTFL 178 Query: 262 VELRIKPYYLHHPDLAAGTSHFRLTIEEGQKIVASLKEKISG 303 +R +P +G+++ + +SG Sbjct: 179 DWIRTRP---IQLRFIELME-----TGDGREMFR--RHHVSG 210 >gi|258511959|ref|YP_003185393.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478685|gb|ACV59004.1| MiaB-like tRNA modifying enzyme [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 471 Score = 35.9 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 29/158 (18%), Positives = 50/158 (31%), Gaps = 30/158 (18%) Query: 94 PDRILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFT--- 150 R LK+ C +C FC G + + +A ++ E++ T Sbjct: 142 RSRANLKIQDGCNNFCTFCIIPRARGLIRSRKPENVVLQATK---LARAGYREIVLTGIH 198 Query: 151 ----GGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKP 206 G D + RL +L L I +R S ++ I+ L+ L + K Sbjct: 199 TGGYGED---FENYRLADLLLDLERIDLPFRIRISS----IEASEIDDRLMDVLAAS-KK 250 Query: 207 VYIAIHA------------NHPYEFSEEAIAAISRLAN 232 V +H H + + E + L Sbjct: 251 VVPHLHIPLQAGSDPVLRRMHRHYTTAEYAEKLRELRR 288 >gi|218261905|ref|ZP_03476578.1| hypothetical protein PRABACTJOHN_02249 [Parabacteroides johnsonii DSM 18315] gi|218223699|gb|EEC96349.1| hypothetical protein PRABACTJOHN_02249 [Parabacteroides johnsonii DSM 18315] Length = 431 Score = 35.9 bits (82), Expect = 9.8, Method: Composition-based stats. Identities = 21/123 (17%), Positives = 48/123 (39%), Gaps = 22/123 (17%) Query: 95 DRIL--------LKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQ--- 143 DR+L LK+ C C +C G + + ++ E + + ++ Sbjct: 128 DRVLTTPRHYAYLKIAEGCDRTCSYCAIPISTGRYQ--SIPMEEIEKEVRLLVKQGVKEF 185 Query: 144 ---IWEVIFTGGDPLILSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCL 200 ++ + G D + L ++++ + I V+ +R H P P +L++ + Sbjct: 186 QVIAQDLTYYGLD--LYKRHALPELVERISDIPGVEWIRLHYGYPSHFPY----DLLRVM 239 Query: 201 KEA 203 +E Sbjct: 240 RER 242 >gi|308068323|ref|YP_003869928.1| Fe-S oxidoreductase [Paenibacillus polymyxa E681] gi|305857602|gb|ADM69390.1| Predicted Fe-S oxidoreductase [Paenibacillus polymyxa E681] Length = 376 Score = 35.9 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 18/122 (14%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + + + H+C + C C +M+ ++ L + L + E + + TGG+P + Sbjct: 36 VEMTVTHLCNMRCEHCAVGDMLVMKEAPFLP---LDLMLKRLDEVEHLETISITGGEPAL 92 Query: 157 LSHKRLQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPV----YIAIH 212 L K + +V+ L + +R +IN L ++ K + + I Sbjct: 93 L-DKTVDEVIVPLLKYAKERGVR----------SQINSNLTLDIRRYEKMLPYLDVMHIS 141 Query: 213 AN 214 N Sbjct: 142 FN 143 >gi|269837718|ref|YP_003319946.1| hypothetical protein Sthe_1690 [Sphaerobacter thermophilus DSM 20745] gi|269786981|gb|ACZ39124.1| protein of unknown function DUF512 [Sphaerobacter thermophilus DSM 20745] Length = 470 Score = 35.9 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 24/139 (17%) Query: 194 PELIQCLKEAGKPVYIAIHANHPYEF------SEEAIAAI---SRLANAGIILLSQSVLL 244 + + ++ P+ +++HA +P E + A + +RL GI +Q VL Sbjct: 144 EDWQRIEEQRISPINVSVHATNP-ELRVALVGNPRAAQIMEDLARLERIGIDYNAQLVLC 202 Query: 245 KGINDDPEILANLMRTFVELRIKPYYLHHPDLAAGTSHF-------RLTIEEGQKIVASL 297 GIND PE + +R + L P+ L + G S F R+ + + SL Sbjct: 203 PGINDGPE-MDRTIRDLISLG--PHLLSIAAVPVGLSKFGQERQSRRVRLSRTC--MRSL 257 Query: 298 KEKISGLCQPFYILDLPGG 316 + L Y + G Sbjct: 258 PGAL--LDIRRYTPEEAEG 274 >gi|227873762|ref|ZP_03991991.1| thiamine biosynthesis protein ThiH [Oribacterium sinus F0268] gi|227840378|gb|EEJ50779.1| thiamine biosynthesis protein ThiH [Oribacterium sinus F0268] Length = 512 Score = 35.9 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 4/86 (4%) Query: 93 YPDRILLKL----LHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVI 148 Y +RI+L + C C +C LS ++ + +Q+ + Sbjct: 120 YGNRIVLFAPLYLSNYCVNGCVYCPYHAKNKDIARRKLSQEEIRKEVIALQDMGHKRLAL 179 Query: 149 FTGGDPLILSHKRLQKVLKTLRYIKH 174 G DP+ + + + +KT+ I H Sbjct: 180 EAGEDPVHNPIEYILESIKTIYSIHH 205 >gi|226940122|ref|YP_002795195.1| ChuW [Laribacter hongkongensis HLHK9] gi|226715048|gb|ACO74186.1| ChuW [Laribacter hongkongensis HLHK9] Length = 452 Score = 35.9 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%) Query: 94 PDRILLKL-LHVCPVYCRFC--FRREMVGSQKGTVLSS--KDTEAALAYIQEKSQIWEVI 148 P+R L+ + + C +C FC +R + D EA A I V Sbjct: 53 PERALVYVHIPFCANHCVFCGFYRNGWNAGLAEQYVDRLVADIEAEAARRPAGGSIAAVY 112 Query: 149 FTGGDPLILSHKRLQKVLKTLRY 171 GG P +L +L ++L+TLR Sbjct: 113 LGGGTPTLLPAGQLTRLLQTLRR 135 >gi|225874258|ref|YP_002755717.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196] gi|225791949|gb|ACO32039.1| radical SAM domain protein [Acidobacterium capsulatum ATCC 51196] Length = 226 Score = 35.9 bits (82), Expect = 9.9, Method: Composition-based stats. Identities = 38/160 (23%), Positives = 58/160 (36%), Gaps = 23/160 (14%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTGGDPLI 156 + L C + C +C G S + LA I+ + + V FTGG+PL Sbjct: 21 CIFVRLAGCNLRCSWCDSEYTFTG--GEAFSDDEI---LARIEALAPVRLVEFTGGEPL- 74 Query: 157 LSHKRLQKVLKTLRYIKHVQIL-RFHSRVPIVDPQ---RINPELIQCLKEAGKPVYIAIH 212 L K+L ++ L + ++ R P +I EAGK + + Sbjct: 75 LQAKQLIPFMERLLAAGYELMIETSGERPLREVPAAVHKIVDVKCPGSGEAGKFLMENLE 134 Query: 213 ANHPY-------------EFSEEAIAAISRLANAGIILLS 239 P EF+ E + A + AG ILLS Sbjct: 135 FLTPRDEVKFVIADRADYEFAREFLRAHALDRKAGQILLS 174 >gi|258516358|ref|YP_003192580.1| RNA modification enzyme, MiaB family [Desulfotomaculum acetoxidans DSM 771] gi|257780063|gb|ACV63957.1| RNA modification enzyme, MiaB family [Desulfotomaculum acetoxidans DSM 771] Length = 435 Score = 35.9 bits (82), Expect = 10.0, Method: Composition-based stats. Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 13/123 (10%) Query: 96 RILLKLLHVCPVYCRFCF----RREMVGSQKGTVLSSKDTEAALAYIQEKSQIWEVIFTG 151 R LK+ C +C +C R + Q VL+ ++ A + K + I TG Sbjct: 145 RAYLKIQEGCRNFCSYCIIPYARGPLRSRQPEAVLNEAESLLAAGF---KEIVLTGIQTG 201 Query: 152 GDPLILSHKR-LQKVLKTLRYIKHVQILRFHSRVPIVDPQRINPELIQCLKEAGKPVYIA 210 + L K L +++ L I + LR S ++P ++PELI+ + K Sbjct: 202 AYGVDLPAKTSLAAIVEKLLRISGLSRLRLSS----IEPNDLSPELIELIL-HSKIFCPH 256 Query: 211 IHA 213 +H Sbjct: 257 LHI 259 >gi|167644273|ref|YP_001681936.1| radical SAM domain-containing protein [Caulobacter sp. K31] gi|167346703|gb|ABZ69438.1| Radical SAM domain protein [Caulobacter sp. K31] Length = 481 Score = 35.9 bits (82), Expect = 10.0, Method: Composition-based stats. Identities = 32/179 (17%), Positives = 57/179 (31%), Gaps = 47/179 (26%) Query: 97 ILLKLLHVCPVYCRFCFRREMVGSQK--GTVLSSKDTEAALAYI-QEKSQIWEVIFTGGD 153 +L++ C + C CF GS + E L I + + V +GG+ Sbjct: 113 AILEINEACNLTCPVCF----AGSSTSLDAHRPLAEVERMLDVIVASEGEPDLVQLSGGE 168 Query: 154 PLILSHKRLQKVLKTLRY--IKHVQI----LRFHSRVPIVDPQRINPELIQCLKEAGKPV 207 P + + ++L R I+H+ I LR + L Sbjct: 169 PTLHP--QFFEILSAARARPIRHLMINTNGLRIAREA----------GFAERLATYMPRF 216 Query: 208 YIAIHANHPYEFSEEAIAAISRLANAG-IILLSQS---------------VLLKGINDD 250 + + A+ +L A + + +Q+ L KG+NDD Sbjct: 217 EVYLQF------DSLKRDALMQLRGADLVKVRTQALEALERNNIPTTLVVTLKKGVNDD 269 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.313 0.170 0.550 Lambda K H 0.267 0.0520 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,062,558,564 Number of Sequences: 14124377 Number of extensions: 416722348 Number of successful extensions: 1107036 Number of sequences better than 10.0: 4450 Number of HSP's better than 10.0 without gapping: 2161 Number of HSP's successfully gapped in prelim test: 3541 Number of HSP's that attempted gapping in prelim test: 1097318 Number of HSP's gapped (non-prelim): 6662 length of query: 352 length of database: 4,842,793,630 effective HSP length: 140 effective length of query: 212 effective length of database: 2,865,380,850 effective search space: 607460740200 effective search space used: 607460740200 T: 11 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.0 bits) S2: 82 (35.9 bits)